BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780905|ref|YP_003065318.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62] (271 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780905|ref|YP_003065318.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62] gi|254040582|gb|ACT57378.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62] Length = 271 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 271/271 (100%), Positives = 271/271 (100%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL Sbjct: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS Sbjct: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI Sbjct: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH Sbjct: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS Sbjct: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 >gi|315122618|ref|YP_004063107.1| glutamate racemase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496020|gb|ADR52619.1| glutamate racemase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 271 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 190/262 (72%), Positives = 226/262 (86%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K +N I+IFDSGIGGL VLQK+RFLMPEYHFIYVADD GFPYGNWED+ALK+RL+FLF Sbjct: 9 KKNPKNCIMIFDSGIGGLSVLQKVRFLMPEYHFIYVADDSGFPYGNWEDNALKERLLFLF 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +DIL+KY+PVLS++ACNTAFTL+KDELRSTFPSM FLGAVPAIKQA YT +GL+S+LST Sbjct: 69 ADILEKYKPVLSIVACNTAFTLVKDELRSTFPSMLFLGAVPAIKQATVYTSTGLVSVLST 128 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 PATLRR YT +LI SY S+C I+LVSS LAS E+Y CG +KED I++EI+GCF+EKE Sbjct: 129 PATLRRAYTDDLIRSYASKCQINLVSSTTLASIAEDYTCGKIVKEDGIQREIQGCFLEKE 188 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 G+RTDV+VLACTHYP + H+FR+LSPWPVDWLD S SIARRAR LLP I ++ + DD Sbjct: 189 GRRTDVVVLACTHYPFMTHIFRRLSPWPVDWLDTSYSIARRARSLLPVIAMNEVGLSDDQ 248 Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270 +F+S KPDIAM+RLMQGFGLK Sbjct: 249 VVFISRKPDIAMQRLMQGFGLK 270 >gi|150396728|ref|YP_001327195.1| glutamate racemase [Sinorhizobium medicae WSM419] gi|166231055|sp|A6U9N0|MURI_SINMW RecName: Full=Glutamate racemase gi|150028243|gb|ABR60360.1| glutamate racemase [Sinorhizobium medicae WSM419] Length = 271 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 148/255 (58%), Positives = 192/255 (75%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF +L ++ Sbjct: 9 ILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGRLLAEH 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR +P M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 69 DPEICIIACNTAFTLVGADLRIVYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 128 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ SQCH+ LV S LA E Y G + +D ++ EI CF+E +GKRTD++ Sbjct: 129 YTRDLIQSFASQCHVRLVGSENLARMAEAYIRGEALTDDAVRAEIAPCFVEVDGKRTDIV 188 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F SGK Sbjct: 189 VLACTHYPFVANVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTSGK 248 Query: 256 PDIAMRRLMQGFGLK 270 PD A RRLMQGFGLK Sbjct: 249 PDFATRRLMQGFGLK 263 >gi|15965542|ref|NP_385895.1| glutamate racemase [Sinorhizobium meliloti 1021] gi|307302662|ref|ZP_07582418.1| glutamate racemase [Sinorhizobium meliloti BL225C] gi|307318509|ref|ZP_07597943.1| glutamate racemase [Sinorhizobium meliloti AK83] gi|20177981|sp|Q92PG8|MURI_RHIME RecName: Full=Glutamate racemase gi|15074723|emb|CAC46368.1| Probable glutamate racemase [Sinorhizobium meliloti 1021] gi|306895849|gb|EFN26601.1| glutamate racemase [Sinorhizobium meliloti AK83] gi|306903026|gb|EFN33617.1| glutamate racemase [Sinorhizobium meliloti BL225C] Length = 277 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 147/255 (57%), Positives = 192/255 (75%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF +L + Sbjct: 9 ILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGRLLAEL 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR+ +P M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 69 DPEICIIACNTAFTLVGADLRAAYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 128 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ SQCH+ LV S LA E Y G + ++ + EIE CF+E EGKRTD++ Sbjct: 129 YTRDLIQSFASQCHVRLVGSENLARMAEAYIRGDALADEAVLAEIEPCFVEAEGKRTDIV 188 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F SG+ Sbjct: 189 VLACTHYPFMSNVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTSGR 248 Query: 256 PDIAMRRLMQGFGLK 270 PD A RRLMQGFGL+ Sbjct: 249 PDFATRRLMQGFGLR 263 >gi|227822188|ref|YP_002826159.1| glutamate racemase [Sinorhizobium fredii NGR234] gi|254766122|sp|C3MD87|MURI_RHISN RecName: Full=Glutamate racemase gi|227341188|gb|ACP25406.1| glutamate racemase [Sinorhizobium fredii NGR234] Length = 267 Score = 324 bits (830), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 146/254 (57%), Positives = 194/254 (76%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF D+L ++ Sbjct: 9 ILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGDLLREH 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR+ +P M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 69 DPEICIIACNTAFTLVGADLRAAYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 128 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ SQCH+ LV S LA E Y G K++++ + EI CF+E +G++TD++ Sbjct: 129 YTRDLIQSFASQCHVRLVGSENLARMAEAYIRGEKLEDEIVLAEIAPCFVEMDGRKTDIV 188 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F SGK Sbjct: 189 VLACTHYPFMENVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTSGK 248 Query: 256 PDIAMRRLMQGFGL 269 PD A RRLMQGFGL Sbjct: 249 PDFATRRLMQGFGL 262 >gi|328543188|ref|YP_004303297.1| glutamate racemase [polymorphum gilvum SL003B-26A1] gi|326412934|gb|ADZ69997.1| Glutamate racemase [Polymorphum gilvum SL003B-26A1] Length = 258 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 141/254 (55%), Positives = 187/254 (73%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSGIGGL VL++ R LMPE F+YVADD FPYG W++ L+ RL+ LF+++ D++ Sbjct: 1 MLLFDSGIGGLTVLREARVLMPERSFVYVADDAAFPYGGWDEAPLRARLLALFAELFDRF 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 PV+S++ACNTAFTL +LR+ FP F+G VPAIK AA T+SGL+S+L+TP T+RR Sbjct: 61 DPVVSIVACNTAFTLAGADLRAAFPDRTFVGTVPAIKPAAERTRSGLVSVLATPGTVRRA 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI S+ SQCH+ LV S LA E Y G + ++ + EI CF+EK+G RTD++ Sbjct: 121 YTRELIQSFASQCHVRLVGSQNLAPMAEAYIRGEPLSDEAVGAEIADCFLEKDGARTDIV 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + +VFR+LSPWPVDWLD +++IAR+AR L+P + + R DHA+F SG Sbjct: 181 VLACTHYPFLANVFRRLSPWPVDWLDPAEAIARQARRLVPALAHLKDRTQTDHAVFTSGS 240 Query: 256 PDIAMRRLMQGFGL 269 PD RRLMQGFGL Sbjct: 241 PDFPTRRLMQGFGL 254 >gi|241204880|ref|YP_002975976.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858770|gb|ACS56437.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 267 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 142/255 (55%), Positives = 191/255 (74%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSGIGGL VL+++R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+++ Sbjct: 11 VLVFDSGIGGLTVLREVRVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFGRLLEEH 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG++TD++ Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDEAVLTEIDQCFVEKEGRKTDIV 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P+I D A+F SG Sbjct: 191 VLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPQIADAVHPDNFDFAVFTSGN 250 Query: 256 PDIAMRRLMQGFGLK 270 PD A RRLMQGFGL Sbjct: 251 PDFATRRLMQGFGLS 265 >gi|116252373|ref|YP_768211.1| glutamate racemase [Rhizobium leguminosarum bv. viciae 3841] gi|115257021|emb|CAK08115.1| putative glutamate racemase [Rhizobium leguminosarum bv. viciae 3841] Length = 267 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 142/256 (55%), Positives = 191/256 (74%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+++ Sbjct: 11 VLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFGRLLEEH 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG++TD++ Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDVVSDEAVLSEIDQCFVEKEGRKTDIV 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P+I D A+F SG Sbjct: 191 VLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPQIADAVHPDNFDFAVFTSGN 250 Query: 256 PDIAMRRLMQGFGLKS 271 PD A RRLMQGFGL + Sbjct: 251 PDFATRRLMQGFGLST 266 >gi|218663166|ref|ZP_03519096.1| glutamate racemase [Rhizobium etli IE4771] Length = 450 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 141/256 (55%), Positives = 190/256 (74%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+ Y Sbjct: 195 VLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLNDY 254 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 255 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 314 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+G++TD++ Sbjct: 315 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDDAVLAEIDQCFVEKDGQKTDIV 374 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P + D A+F SG+ Sbjct: 375 VLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAMFTSGQ 434 Query: 256 PDIAMRRLMQGFGLKS 271 D A RRLMQGFGLK+ Sbjct: 435 QDFATRRLMQGFGLKA 450 >gi|325293269|ref|YP_004279133.1| Glutamate racemase [Agrobacterium sp. H13-3] gi|325061122|gb|ADY64813.1| Glutamate racemase [Agrobacterium sp. H13-3] Length = 273 Score = 315 bits (808), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 145/255 (56%), Positives = 187/255 (73%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK R++ LF +L+ Y Sbjct: 15 VLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEEALKARILSLFEKLLEDY 74 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 75 SPEVCIIACNTAFTLAGADLRARFPDMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 134 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ +QCH+ LV S LA E + G I ++ + EIE CFI+ +GKRTD++ Sbjct: 135 YTRDLIQSFATQCHVRLVGSENLARMAESWIRGEPISDEAVLAEIEPCFIDSDGKRTDIV 194 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P + D A+F SGK Sbjct: 195 VLACTHYPFMANVFRRLAPWPVDWLDPAEAIARRARHLVPLPQDAEHPDGFDFAVFTSGK 254 Query: 256 PDIAMRRLMQGFGLK 270 PD A RRLMQGFGL Sbjct: 255 PDFATRRLMQGFGLS 269 >gi|86357929|ref|YP_469821.1| glutamate racemase [Rhizobium etli CFN 42] gi|86282031|gb|ABC91094.1| glutamate racemase (required for biosynthesis of D-glutamate and peptidoglycan) protein [Rhizobium etli CFN 42] Length = 266 Score = 315 bits (807), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 141/256 (55%), Positives = 188/256 (73%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSGIGGL VL++ R LMPE F+YVADD GFPYG WE+ ALK+R++ LF +L Y Sbjct: 11 VLVFDSGIGGLTVLREARVLMPERGFVYVADDAGFPYGGWEEQALKERIIGLFGKLLQDY 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 71 HPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG +TD++ Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDEAVLAEIDQCFVEKEGYKTDIV 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P + D A+F SG Sbjct: 191 VLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTSGN 250 Query: 256 PDIAMRRLMQGFGLKS 271 PD A RRLMQGFGL++ Sbjct: 251 PDFATRRLMQGFGLRA 266 >gi|218463622|ref|ZP_03503713.1| glutamate racemase [Rhizobium etli Kim 5] Length = 266 Score = 314 bits (805), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 141/256 (55%), Positives = 190/256 (74%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+ Y Sbjct: 11 VLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLNDY 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+E++G++TD++ Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDALSDDAVLAEIDQCFVERDGQKTDIV 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P I D A+F SG+ Sbjct: 191 VLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLIADAVHPDNFDFAMFTSGQ 250 Query: 256 PDIAMRRLMQGFGLKS 271 D A RRLMQGFGLK+ Sbjct: 251 QDFATRRLMQGFGLKA 266 >gi|15889167|ref|NP_354848.1| glutamate racemase [Agrobacterium tumefaciens str. C58] gi|22001824|sp|Q8UE93|MURI_AGRT5 RecName: Full=Glutamate racemase gi|15156983|gb|AAK87633.1| glutamate racemase [Agrobacterium tumefaciens str. C58] Length = 273 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 144/255 (56%), Positives = 186/255 (72%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK R++ LF +L Y Sbjct: 15 VLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEEALKTRILSLFETLLQDY 74 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 75 SPEVCIIACNTAFTLAGADLRARFPDMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 134 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ +QCH+ LV S LA E + G + ++ + EIE CFI+ +GKRTD++ Sbjct: 135 YTRDLIQSFATQCHVRLVGSENLARMAESWIRGEPVSDEAVLAEIEPCFIDSDGKRTDIV 194 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P + D A+F SGK Sbjct: 195 VLACTHYPFMANVFRRLAPWPVDWLDPAEAIARRARHLVPLPQDAEHPDGFDFAVFTSGK 254 Query: 256 PDIAMRRLMQGFGLK 270 PD A RRLMQGFGL Sbjct: 255 PDFATRRLMQGFGLS 269 >gi|222086155|ref|YP_002544687.1| glutamate racemase [Agrobacterium radiobacter K84] gi|221723603|gb|ACM26759.1| glutamate racemase [Agrobacterium radiobacter K84] Length = 266 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 138/256 (53%), Positives = 190/256 (74%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG+WE+ AL++R++ LF+ +L Y Sbjct: 11 VLMFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGDWEEQALRERIVGLFAKLLADY 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 71 DPEICIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ +QCH+ LV S LA E Y G + +D + E+ CF+E +G++TD++ Sbjct: 131 YTRDLIQSFATQCHVRLVGSENLARIAEAYIRGGTVSDDAVLAEVGQCFVEMDGRKTDIV 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P++ D A+F SG Sbjct: 191 VLACTHYPFMANIFRRLAPWPVDWLDPAEAIARRARSLVPQVADAVHPDTYDFAVFTSGT 250 Query: 256 PDIAMRRLMQGFGLKS 271 PD RRLMQGFGL++ Sbjct: 251 PDFPTRRLMQGFGLRA 266 >gi|209549543|ref|YP_002281460.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535299|gb|ACI55234.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 266 Score = 311 bits (797), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 143/256 (55%), Positives = 187/256 (73%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF+ +L Y Sbjct: 11 ILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFAKLLADY 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T+RR Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMIFVGTVPAIKPAAERTRSGLVSVLATPGTVRRA 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+G +TD++ Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDGHKTDIV 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P D A+F SG Sbjct: 191 VLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPAAADAVHPDNFDFAVFTSGH 250 Query: 256 PDIAMRRLMQGFGLKS 271 D A RRLMQGFGL++ Sbjct: 251 QDFATRRLMQGFGLRA 266 >gi|327190530|gb|EGE57624.1| glutamate racemase protein (required for biosynthesis of D-glutamate and peptidoglycan) [Rhizobium etli CNPAF512] Length = 266 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 141/256 (55%), Positives = 188/256 (73%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L Y Sbjct: 11 ILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLTDY 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+ ++TD++ Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTDIV 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P I D A+F SG+ Sbjct: 191 VLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLIADAVHPDNFDFAVFTSGQ 250 Query: 256 PDIAMRRLMQGFGLKS 271 D A RRLMQGFGL++ Sbjct: 251 QDFATRRLMQGFGLRA 266 >gi|190892000|ref|YP_001978542.1| glutamate racemase (required for biosynthesis of D-glutamate and peptidoglycan) [Rhizobium etli CIAT 652] gi|190697279|gb|ACE91364.1| glutamate racemase protein (required for biosynthesis of D-glutamate and peptidoglycan) [Rhizobium etli CIAT 652] Length = 266 Score = 308 bits (788), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 139/256 (54%), Positives = 188/256 (73%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L Y Sbjct: 11 ILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLTDY 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ QC++ LV S LA E Y G + +D + EI+ CF+EK+ ++TD++ Sbjct: 131 YTRDLIQSFAQQCNVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTDIV 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P + D A+F SG+ Sbjct: 191 VLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTSGQ 250 Query: 256 PDIAMRRLMQGFGLKS 271 D A RRLMQGFGL++ Sbjct: 251 QDFATRRLMQGFGLRA 266 >gi|254719253|ref|ZP_05181064.1| glutamate racemase [Brucella sp. 83/13] gi|265984252|ref|ZP_06096987.1| glutamate racemase [Brucella sp. 83/13] gi|306838003|ref|ZP_07470861.1| glutamate racemase [Brucella sp. NF 2653] gi|264662844|gb|EEZ33105.1| glutamate racemase [Brucella sp. 83/13] gi|306406927|gb|EFM63148.1| glutamate racemase [Brucella sp. NF 2653] Length = 277 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 141/269 (52%), Positives = 196/269 (72%), Gaps = 3/269 (1%) Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+ Sbjct: 8 SFPAKPAIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL Sbjct: 68 RIIELFGEFITNYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAP 187 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241 CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 DD A F S KPD A+RRLMQGFGL+ Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276 >gi|306840341|ref|ZP_07473112.1| glutamate racemase [Brucella sp. BO2] gi|306844094|ref|ZP_07476688.1| glutamate racemase [Brucella sp. BO1] gi|306275537|gb|EFM57269.1| glutamate racemase [Brucella sp. BO1] gi|306289688|gb|EFM60880.1| glutamate racemase [Brucella sp. BO2] Length = 277 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 141/269 (52%), Positives = 196/269 (72%), Gaps = 3/269 (1%) Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+ Sbjct: 8 SFPAKPAIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAP 187 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241 CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 DD A F S KPD A+RRLMQGFGL+ Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276 >gi|17987078|ref|NP_539712.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M] gi|23502072|ref|NP_698199.1| glutamate racemase [Brucella suis 1330] gi|62290106|ref|YP_221899.1| glutamate racemase [Brucella abortus bv. 1 str. 9-941] gi|82700029|ref|YP_414603.1| glutamate racemase [Brucella melitensis biovar Abortus 2308] gi|161619150|ref|YP_001593037.1| glutamate racemase [Brucella canis ATCC 23365] gi|189024344|ref|YP_001935112.1| glutamate racemase [Brucella abortus S19] gi|225627664|ref|ZP_03785701.1| glutamate racemase [Brucella ceti str. Cudo] gi|225852691|ref|YP_002732924.1| glutamate racemase [Brucella melitensis ATCC 23457] gi|237815612|ref|ZP_04594609.1| glutamate racemase [Brucella abortus str. 2308 A] gi|254689415|ref|ZP_05152669.1| glutamate racemase [Brucella abortus bv. 6 str. 870] gi|254693900|ref|ZP_05155728.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya] gi|254697550|ref|ZP_05159378.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59] gi|254704480|ref|ZP_05166308.1| glutamate racemase [Brucella suis bv. 3 str. 686] gi|254706624|ref|ZP_05168452.1| glutamate racemase [Brucella pinnipedialis M163/99/10] gi|254710266|ref|ZP_05172077.1| glutamate racemase [Brucella pinnipedialis B2/94] gi|254714263|ref|ZP_05176074.1| glutamate racemase [Brucella ceti M644/93/1] gi|254717699|ref|ZP_05179510.1| glutamate racemase [Brucella ceti M13/05/1] gi|254730444|ref|ZP_05189022.1| glutamate racemase [Brucella abortus bv. 4 str. 292] gi|256031760|ref|ZP_05445374.1| glutamate racemase [Brucella pinnipedialis M292/94/1] gi|256044845|ref|ZP_05447749.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1] gi|256061275|ref|ZP_05451425.1| glutamate racemase [Brucella neotomae 5K33] gi|256113750|ref|ZP_05454554.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether] gi|256159930|ref|ZP_05457648.1| glutamate racemase [Brucella ceti M490/95/1] gi|256255161|ref|ZP_05460697.1| glutamate racemase [Brucella ceti B1/94] gi|256257661|ref|ZP_05463197.1| glutamate racemase [Brucella abortus bv. 9 str. C68] gi|256263818|ref|ZP_05466350.1| glutamate racemase [Brucella melitensis bv. 2 str. 63/9] gi|260168894|ref|ZP_05755705.1| glutamate racemase [Brucella sp. F5/99] gi|260546655|ref|ZP_05822394.1| glutamate racemase [Brucella abortus NCTC 8038] gi|260565553|ref|ZP_05836037.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M] gi|260566276|ref|ZP_05836746.1| glutamate racemase [Brucella suis bv. 4 str. 40] gi|260754937|ref|ZP_05867285.1| glutamate racemase [Brucella abortus bv. 6 str. 870] gi|260758153|ref|ZP_05870501.1| glutamate racemase [Brucella abortus bv. 4 str. 292] gi|260761979|ref|ZP_05874322.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59] gi|260883947|ref|ZP_05895561.1| glutamate racemase [Brucella abortus bv. 9 str. C68] gi|261214189|ref|ZP_05928470.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya] gi|261219542|ref|ZP_05933823.1| glutamate racemase [Brucella ceti M13/05/1] gi|261222358|ref|ZP_05936639.1| glutamate racemase [Brucella ceti B1/94] gi|261314084|ref|ZP_05953281.1| glutamate racemase [Brucella pinnipedialis M163/99/10] gi|261317828|ref|ZP_05957025.1| glutamate racemase [Brucella pinnipedialis B2/94] gi|261322037|ref|ZP_05961234.1| glutamate racemase [Brucella ceti M644/93/1] gi|261325282|ref|ZP_05964479.1| glutamate racemase [Brucella neotomae 5K33] gi|261755160|ref|ZP_05998869.1| glutamate racemase [Brucella suis bv. 3 str. 686] gi|261758384|ref|ZP_06002093.1| glutamate racemase [Brucella sp. F5/99] gi|265988858|ref|ZP_06101415.1| glutamate racemase [Brucella pinnipedialis M292/94/1] gi|265991273|ref|ZP_06103830.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1] gi|265995109|ref|ZP_06107666.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether] gi|265998323|ref|ZP_06110880.1| glutamate racemase [Brucella ceti M490/95/1] gi|294852530|ref|ZP_06793203.1| glutamate racemase [Brucella sp. NVSL 07-0026] gi|297248502|ref|ZP_06932220.1| glutamate racemase [Brucella abortus bv. 5 str. B3196] gi|54037864|sp|P63632|MURI_BRUSU RecName: Full=Glutamate racemase gi|54041256|sp|P63631|MURI_BRUME RecName: Full=Glutamate racemase gi|75496705|sp|Q57CU6|MURI_BRUAB RecName: Full=Glutamate racemase gi|123547536|sp|Q2YRV4|MURI_BRUA2 RecName: Full=Glutamate racemase gi|189082953|sp|A9M5L1|MURI_BRUC2 RecName: Full=Glutamate racemase gi|229486232|sp|B2S641|MURI_BRUA1 RecName: Full=Glutamate racemase gi|254766109|sp|C0RJG2|MURI_BRUMB RecName: Full=Glutamate racemase gi|17982736|gb|AAL51976.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M] gi|23348029|gb|AAN30114.1| glutamate racemase [Brucella suis 1330] gi|62196238|gb|AAX74538.1| MurI, glutamate racemase [Brucella abortus bv. 1 str. 9-941] gi|82616130|emb|CAJ11173.1| Asp/Glu racemase [Brucella melitensis biovar Abortus 2308] gi|161335961|gb|ABX62266.1| glutamate racemase [Brucella canis ATCC 23365] gi|189019916|gb|ACD72638.1| Asp/Glu racemase [Brucella abortus S19] gi|225617669|gb|EEH14714.1| glutamate racemase [Brucella ceti str. Cudo] gi|225641056|gb|ACO00970.1| glutamate racemase [Brucella melitensis ATCC 23457] gi|237788910|gb|EEP63121.1| glutamate racemase [Brucella abortus str. 2308 A] gi|260095705|gb|EEW79582.1| glutamate racemase [Brucella abortus NCTC 8038] gi|260151621|gb|EEW86715.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M] gi|260155794|gb|EEW90874.1| glutamate racemase [Brucella suis bv. 4 str. 40] gi|260668471|gb|EEX55411.1| glutamate racemase [Brucella abortus bv. 4 str. 292] gi|260672411|gb|EEX59232.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59] gi|260675045|gb|EEX61866.1| glutamate racemase [Brucella abortus bv. 6 str. 870] gi|260873475|gb|EEX80544.1| glutamate racemase [Brucella abortus bv. 9 str. C68] gi|260915796|gb|EEX82657.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya] gi|260920942|gb|EEX87595.1| glutamate racemase [Brucella ceti B1/94] gi|260924631|gb|EEX91199.1| glutamate racemase [Brucella ceti M13/05/1] gi|261294727|gb|EEX98223.1| glutamate racemase [Brucella ceti M644/93/1] gi|261297051|gb|EEY00548.1| glutamate racemase [Brucella pinnipedialis B2/94] gi|261301262|gb|EEY04759.1| glutamate racemase [Brucella neotomae 5K33] gi|261303110|gb|EEY06607.1| glutamate racemase [Brucella pinnipedialis M163/99/10] gi|261738368|gb|EEY26364.1| glutamate racemase [Brucella sp. F5/99] gi|261744913|gb|EEY32839.1| glutamate racemase [Brucella suis bv. 3 str. 686] gi|262552791|gb|EEZ08781.1| glutamate racemase [Brucella ceti M490/95/1] gi|262766222|gb|EEZ12011.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether] gi|263002057|gb|EEZ14632.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1] gi|263093947|gb|EEZ17881.1| glutamate racemase [Brucella melitensis bv. 2 str. 63/9] gi|264661055|gb|EEZ31316.1| glutamate racemase [Brucella pinnipedialis M292/94/1] gi|294821119|gb|EFG38118.1| glutamate racemase [Brucella sp. NVSL 07-0026] gi|297175671|gb|EFH35018.1| glutamate racemase [Brucella abortus bv. 5 str. B3196] gi|326409213|gb|ADZ66278.1| Asp/Glu racemase [Brucella melitensis M28] gi|326538922|gb|ADZ87137.1| glutamate racemase [Brucella melitensis M5-90] Length = 277 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 141/269 (52%), Positives = 196/269 (72%), Gaps = 3/269 (1%) Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+ Sbjct: 8 SFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAP 187 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241 CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 DD A F S KPD A+RRLMQGFGL+ Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276 >gi|163843460|ref|YP_001627864.1| glutamate racemase [Brucella suis ATCC 23445] gi|189030357|sp|B0CGZ3|MURI_BRUSI RecName: Full=Glutamate racemase gi|163674183|gb|ABY38294.1| glutamate racemase [Brucella suis ATCC 23445] Length = 277 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 141/269 (52%), Positives = 196/269 (72%), Gaps = 3/269 (1%) Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+ Sbjct: 8 SFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGMVPAIKPAAERTSSGL 127 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAP 187 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241 CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 DD A F S KPD A+RRLMQGFGL+ Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276 >gi|256369619|ref|YP_003107129.1| glutamate racemase [Brucella microti CCM 4915] gi|255999781|gb|ACU48180.1| glutamate racemase [Brucella microti CCM 4915] Length = 277 Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 141/269 (52%), Positives = 195/269 (72%), Gaps = 3/269 (1%) Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+ Sbjct: 8 SFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +S+L+TP T++R YT +LI S+ S+CH+ LV + LA E + G E + +I Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAVIAEAHIRGESFDEALVMAQIAP 187 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241 CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 DD A F S KPD A+RRLMQGFGL+ Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276 >gi|148560126|ref|YP_001259114.1| glutamate racemase [Brucella ovis ATCC 25840] gi|166231028|sp|A5VQW7|MURI_BRUO2 RecName: Full=Glutamate racemase gi|148371383|gb|ABQ61362.1| glutamate racemase [Brucella ovis ATCC 25840] Length = 277 Score = 304 bits (779), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 141/269 (52%), Positives = 194/269 (72%), Gaps = 3/269 (1%) Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+ Sbjct: 8 SFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +S+L+TP T++R YT +LI S+ S+CH+ LV LA+ E + G E + +I Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGVDGLAAIAEAHIRGESFDEALVMAQIAP 187 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241 CFIEK GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + Sbjct: 188 CFIEKGGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 DD A F S KPD A+RRLMQGFGL+ Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276 >gi|222148423|ref|YP_002549380.1| glutamate racemase [Agrobacterium vitis S4] gi|221735411|gb|ACM36374.1| glutamate racemase [Agrobacterium vitis S4] Length = 269 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 139/255 (54%), Positives = 185/255 (72%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSGIGGL VL++ R LMPE FIY+ADD GFPYGNWE+ LK R++ LF+ +L +Y Sbjct: 11 ILVFDSGIGGLTVLREARVLMPERGFIYIADDAGFPYGNWEEEPLKARIVSLFASLLAQY 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P ++AC+TAFTL LR FP M F+G VPAIK AA ++SGLIS+L+TP T++R Sbjct: 71 DPEAVIVACSTAFTLAGAALREAFPGMRFIGTVPAIKPAAERSRSGLISVLATPGTVKRA 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ SQC ++LV S LA E Y G ++E +K EI CFIEK+G +TD++ Sbjct: 131 YTRDLIQSFASQCEVNLVGSQHLARLAEAYIRGESVEEAVLKAEIAPCFIEKQGAKTDIV 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP + +VFR+L+PWPVDWLD +++IAR+AR L+P ++ D A+F SG+ Sbjct: 191 VLACTHYPFLANVFRKLAPWPVDWLDPAEAIARQARRLVPVVDEGAHSDDYDFAVFTSGQ 250 Query: 256 PDIAMRRLMQGFGLK 270 P + RLMQGFGL+ Sbjct: 251 PVFSTHRLMQGFGLR 265 >gi|254701935|ref|ZP_05163763.1| glutamate racemase [Brucella suis bv. 5 str. 513] gi|261752501|ref|ZP_05996210.1| glutamate racemase [Brucella suis bv. 5 str. 513] gi|261742254|gb|EEY30180.1| glutamate racemase [Brucella suis bv. 5 str. 513] Length = 277 Score = 302 bits (773), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 140/269 (52%), Positives = 195/269 (72%), Gaps = 3/269 (1%) Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGN E+ ALK+ Sbjct: 8 SFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNREEEALKR 67 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAP 187 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241 CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 DD A F S KPD A+RRLMQGFGL+ Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276 >gi|239832083|ref|ZP_04680412.1| glutamate racemase [Ochrobactrum intermedium LMG 3301] gi|239824350|gb|EEQ95918.1| glutamate racemase [Ochrobactrum intermedium LMG 3301] Length = 278 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 139/258 (53%), Positives = 187/258 (72%), Gaps = 1/258 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IL+FDSGIGGL VL++ R LMP+ F+YVADD GFPYG WE+ AL+ R++ LF ++ Sbjct: 18 ERPILVFDSGIGGLTVLREARVLMPDRRFVYVADDAGFPYGGWEEDALRARIVQLFGKLI 77 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y P ++VIACNTA TL+ D+LR+ +P++ F+G VPAIK AA T SGL+S+L+TP T+ Sbjct: 78 ADYDPEIAVIACNTASTLVLDDLRNAYPAVPFVGTVPAIKPAAERTSSGLVSVLATPGTV 137 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 RR YT +LI S+ SQCH+ LV + LA+ E + G KI E + +I CFIE++G RT Sbjct: 138 RRAYTRDLIQSFASQCHVRLVGADQLAAVAEAHIRGEKIDEALVVAQIAPCFIEQDGNRT 197 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALF 251 D++VLACTHYP + +VFR+L+PWPVDWLD +++IARR LL PR + +D A+ Sbjct: 198 DIVVLACTHYPFLANVFRRLAPWPVDWLDPAEAIARRTVSLLKPRRAVEELHHHNDLAVV 257 Query: 252 LSGKPDIAMRRLMQGFGL 269 S PD A+RRLMQGFGL Sbjct: 258 TSQNPDYAIRRLMQGFGL 275 >gi|153009326|ref|YP_001370541.1| glutamate racemase [Ochrobactrum anthropi ATCC 49188] gi|166231047|sp|A6X0F8|MURI_OCHA4 RecName: Full=Glutamate racemase gi|151561214|gb|ABS14712.1| glutamate racemase [Ochrobactrum anthropi ATCC 49188] Length = 278 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 138/258 (53%), Positives = 188/258 (72%), Gaps = 1/258 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IL+FDSGIGGL VL++ R LMP+ F+YVADD GFPYG WE+ AL++R++ LF ++ Sbjct: 18 ERPILVFDSGIGGLTVLREARVLMPDRRFVYVADDAGFPYGGWEEDALRERIVELFGKLI 77 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y P ++VIACNTA TL+ D+LR +PS+ F+G VPAIK AA T SGL+S+L+TP T+ Sbjct: 78 AAYDPEIAVIACNTASTLVLDDLRQAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGTV 137 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 RR YT +LI S+ +QCH+ LV + LA+ E + G +I E + ++I CFIE++G RT Sbjct: 138 RRAYTRDLIQSFATQCHVRLVGADQLATVAEAHIRGERIDEALVVEQIAPCFIEQDGNRT 197 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALF 251 D++VLACTHYP + +VFR+L+PWPVDWLD +++IARR LL PR + +D A+ Sbjct: 198 DIVVLACTHYPFLANVFRRLAPWPVDWLDPAEAIARRTVSLLKPRRADEELHHHNDLAVV 257 Query: 252 LSGKPDIAMRRLMQGFGL 269 S PD A+RRLMQGFGL Sbjct: 258 TSRNPDYAIRRLMQGFGL 275 >gi|260460843|ref|ZP_05809093.1| glutamate racemase [Mesorhizobium opportunistum WSM2075] gi|259033420|gb|EEW34681.1| glutamate racemase [Mesorhizobium opportunistum WSM2075] Length = 275 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 131/256 (51%), Positives = 182/256 (71%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF+ +LD Sbjct: 4 QPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILELFARLLD 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ PV+SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T++ Sbjct: 64 RFSPVISVIACNTASTLVIDALRDRFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTVK 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E +G+RTD Sbjct: 124 RQYTRDLISKWAQKCHVRLVGSDRLAGLAEAYMREGFVDEEAVRAEITPCFMEHDGRRTD 183 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F S Sbjct: 184 IVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFTS 243 Query: 254 GKPDIAMRRLMQGFGL 269 GK D A+ RLMQGFGL Sbjct: 244 GKADFAVSRLMQGFGL 259 >gi|110633622|ref|YP_673830.1| glutamate racemase [Mesorhizobium sp. BNC1] gi|110284606|gb|ABG62665.1| glutamate racemase [Chelativorans sp. BNC1] Length = 274 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 129/257 (50%), Positives = 182/257 (70%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + IL FDSGIGGL V+++ R L+PE+ ++YVADD FPYG WE+ AL+ RL+ LF ++ Sbjct: 8 SPILFFDSGIGGLSVVKEARVLLPEHPYVYVADDAAFPYGAWEEGALRARLVELFGSLIA 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ P L VIACNTA TL +LR+ +PS F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 68 RFAPSLIVIACNTASTLAIADLRAAYPSQLFVGTVPAIKPAAERTRSGLVSVLATPGTVK 127 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI +Y ++CH+ LV S LAS E+Y + E+ ++KEIE CF+E++G+RTD Sbjct: 128 RQYTRDLISAYAAKCHVRLVGSENLASLAEKYMREGFVDEEAVRKEIEPCFMERDGQRTD 187 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP +V+ R+++PWPVDW+D S++IARRA L + D A F S Sbjct: 188 IVVLACTHYPFLVNRMRKMAPWPVDWIDTSEAIARRALTLAETLPPPARPDLPDRACFTS 247 Query: 254 GKPDIAMRRLMQGFGLK 270 G P ++RRL GFG + Sbjct: 248 GNPPASLRRLASGFGFR 264 >gi|114707294|ref|ZP_01440191.1| glutamate racemase [Fulvimarina pelagi HTCC2506] gi|114537175|gb|EAU40302.1| glutamate racemase [Fulvimarina pelagi HTCC2506] Length = 262 Score = 285 bits (729), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 131/256 (51%), Positives = 182/256 (71%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 ILI DSG+GGL VL++ R LMP+ F+YVADD GFPYGNWE+ AL+ RL+ LF D++ + Sbjct: 6 ILILDSGVGGLTVLREARVLMPDRRFVYVADDAGFPYGNWEEDALRDRLVALFGDLIVAH 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P+ VIACNTA TL + LR ++P M F+G VPAIK AA T+SGL+S+L+TP T+RR Sbjct: 66 EPLACVIACNTASTLALNALRQSYPRMKFVGTVPAIKPAAERTRSGLVSVLATPGTVRRQ 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI + S+ + LV S+ LAS E Y G + E + EI CFIE+ G+RTD++ Sbjct: 126 YTQDLIDQWASRVSVKLVGSVALASLAERYMRGGFVDEQAVLAEIAPCFIEENGRRTDIV 185 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VLACTHYP +V+ R+++PWPVDWLD +++IAR+A ++ T D A+F SG Sbjct: 186 VLACTHYPFLVNRMRKMAPWPVDWLDPAEAIARQADRVVGDAGTRSMHGDFDPAVFTSGA 245 Query: 256 PDIAMRRLMQGFGLKS 271 PD A +R+++GFGL++ Sbjct: 246 PDYATQRIVRGFGLRT 261 >gi|13470360|ref|NP_101926.1| glutamate racemase [Mesorhizobium loti MAFF303099] gi|14021099|dbj|BAB47712.1| glutamate racemase [Mesorhizobium loti MAFF303099] Length = 276 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 131/256 (51%), Positives = 179/256 (69%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF +LD Sbjct: 18 QPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILDLFVKLLD 77 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ P +SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T++ Sbjct: 78 RFAPAISVIACNTASTLVIDALRERFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTVK 137 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E EG RTD Sbjct: 138 RQYTRDLISKWAQKCHVRLVGSDRLAGLAEVYMREGFVDEEAVRAEIAPCFMEHEGLRTD 197 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F S Sbjct: 198 IVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFTS 257 Query: 254 GKPDIAMRRLMQGFGL 269 GK D A+ RLMQGFGL Sbjct: 258 GKTDFAIGRLMQGFGL 273 >gi|20177985|sp|Q98NP9|MURI_RHILO RecName: Full=Glutamate racemase Length = 262 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 131/256 (51%), Positives = 179/256 (69%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF +LD Sbjct: 4 QPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILDLFVKLLD 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ P +SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T++ Sbjct: 64 RFAPAISVIACNTASTLVIDALRERFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTVK 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E EG RTD Sbjct: 124 RQYTRDLISKWAQKCHVRLVGSDRLAGLAEVYMREGFVDEEAVRAEIAPCFMEHEGLRTD 183 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F S Sbjct: 184 IVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFTS 243 Query: 254 GKPDIAMRRLMQGFGL 269 GK D A+ RLMQGFGL Sbjct: 244 GKTDFAIGRLMQGFGL 259 >gi|307945604|ref|ZP_07660940.1| glutamate racemase [Roseibium sp. TrichSKD4] gi|307771477|gb|EFO30702.1| glutamate racemase [Roseibium sp. TrichSKD4] Length = 267 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 132/257 (51%), Positives = 181/257 (70%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + ILIFDSGIGGL VL+++R L+P +YVADD GFP G+WE+ LK+RL+ LF +L Sbjct: 4 RQPILIFDSGIGGLTVLRELRLLLPYETILYVADDAGFPLGDWEEPPLKERLLQLFDGLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++QP SVIACNTAFTL + LR+ P AF+G VPAIK AA T SGL+S+L+TP T+ Sbjct: 64 VRFQPKASVIACNTAFTLAGEALRAAQPDHAFVGTVPAIKPAAERTASGLVSVLATPGTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 RR YT NLI S+ +QCH+ LV S LA+ E+ G + ++ +K EI+ CF+EK+G+RT Sbjct: 124 RRAYTKNLIDSFATQCHVRLVGSDALAAHAEQELRGEPVSDEALKAEIDACFLEKDGRRT 183 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D++VLACTHYP + + FR+L+PWPVDWLD + +IAR+ +L + D A F Sbjct: 184 DIVVLACTHYPFLANRFRKLAPWPVDWLDPAGAIARQVVRVLGDDLYLEPVSVPDTAHFT 243 Query: 253 SGKPDIAMRRLMQGFGL 269 SG+ +++RL+ GFGL Sbjct: 244 SGQSTASLKRLLAGFGL 260 >gi|49475603|ref|YP_033644.1| glutamate racemase [Bartonella henselae str. Houston-1] gi|81647897|sp|Q6G3D5|MURI_BARHE RecName: Full=Glutamate racemase gi|49238410|emb|CAF27637.1| Glutamate racemase [Bartonella henselae str. Houston-1] Length = 270 Score = 281 bits (718), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 133/259 (51%), Positives = 181/259 (69%), Gaps = 1/259 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL VL+++R L+PE FIYVADDVGFPYGNWE++ LK R++ +F+++L Sbjct: 3 ERPVLFFDSGIGGLTVLREVRSLIPEKQFIYVADDVGFPYGNWEENVLKNRILKIFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y P L VIACNT TL+ +LR FP + F+G VPAIK AA T+SG IS+L+TP T+ Sbjct: 63 TVYNPALCVIACNTVSTLMIADLRERFPHILFVGTVPAIKLAAEQTKSGFISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +RTYT LI+S+ QCH+ LV S LA E Y G + +E++ EI CF++K GK T Sbjct: 123 KRTYTHELINSFAGQCHVQLVGSEKLAGFAENYLRGQSVDLEELRNEILPCFVKKNGKHT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251 D+IVLACTHYP ++H FR+ + W V W+D S +IA+R R LLP+ HQT + ++D ALF Sbjct: 183 DIIVLACTHYPFLLHFFREQALWHVQWIDPSKAIAKRTRSLLPQRIHHQTVKKYEDFALF 242 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S + +RL++ F L Sbjct: 243 TSQNITSSTKRLLKEFSLN 261 >gi|218516359|ref|ZP_03513199.1| glutamate racemase [Rhizobium etli 8C-3] Length = 236 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 125/236 (52%), Positives = 171/236 (72%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 MPE FIYVADD GFPYG WE+ ALK+R++ LF +L Y P + +IACNTAFTL+ +L Sbjct: 1 MPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLTDYDPEVCIIACNTAFTLVGADL 60 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 R+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R YT +LI S+ QC++ LV S Sbjct: 61 RAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRAYTRDLIQSFAQQCNVRLVGS 120 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 LA E Y G + +D + EI+ CF+EK+ ++TD++VLACTHYP + ++FR+++PW Sbjct: 121 ENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTDIVVLACTHYPFMANLFRRIAPW 180 Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 PVDWLD +++IARRAR L+P + D A+F SG+ D A RRLMQGFGL++ Sbjct: 181 PVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTSGQQDFATRRLMQGFGLRA 236 >gi|319898917|ref|YP_004159010.1| Glutamate racemase [Bartonella clarridgeiae 73] gi|319402881|emb|CBI76432.1| Glutamate racemase [Bartonella clarridgeiae 73] Length = 273 Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 130/262 (49%), Positives = 179/262 (68%), Gaps = 4/262 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL VL+K+R +PEY FIY+ADD FPYG WE+ L++R++ +F+ +L Sbjct: 3 EKPLLFFDSGIGGLTVLRKVRLFVPEYQFIYIADDAAFPYGVWEEEILRRRILKIFAYLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y PVL VIACNTA TLI ++LR FP++ F+G VPAIK AA T+SG+IS+L+TP T+ Sbjct: 63 KLYNPVLCVIACNTASTLIIEDLRQEFPNICFVGTVPAIKLAAEQTKSGIISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI+S+ QCH+ LV S LA E Y G I E+E++ EI CFIEK GK T Sbjct: 123 KRAYTHELINSFAGQCHVQLVGSEKLAGFAENYLRGYPINEEELRHEILPCFIEKNGKLT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRVFDDH 248 D++VLACTHYP ++++FR+ + WPVDW+D + ++A+R R LLP ++ + D Sbjct: 183 DIVVLACTHYPFLINLFREQALWPVDWIDPAKAVAKRIRSLLPILPIKMQNKNMKKHKDF 242 Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270 ALF S + L+Q F L Sbjct: 243 ALFTSQNISSSTEYLLQKFQLN 264 >gi|118588604|ref|ZP_01546012.1| glutamate racemase [Stappia aggregata IAM 12614] gi|118438590|gb|EAV45223.1| glutamate racemase [Stappia aggregata IAM 12614] Length = 264 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 129/258 (50%), Positives = 174/258 (67%), Gaps = 1/258 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +L FDSG+GGL VL++ R+L+P +YVADD FP G W + LK R++ LF D++ Sbjct: 4 SGPVLFFDSGLGGLTVLREARYLLPYEPLLYVADDAAFPIGRWPEAELKARIVSLFGDLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ P VIACNTAFTL D LR P + F+G VPAIK AA T SGLIS+L+TP T+ Sbjct: 64 AEHGPKAVVIACNTAFTLAGDALREAHPDVPFVGTVPAIKPAAERTSSGLISVLATPGTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 RRTYT +LI S+ SQCH+ LV S +LA E++ G + +D + EI CF+E++GKRT Sbjct: 124 RRTYTRSLIDSFASQCHVRLVGSDMLAELAEKHLRGETVSDDALLPEIADCFLEQDGKRT 183 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPRINTHQTRVFDDHALF 251 D++VLACTHYP + + FR+++PWPVDWLD +++IAR+ R L H R D A+F Sbjct: 184 DIVVLACTHYPFLANRFRKIAPWPVDWLDPAEAIARQLVRVLGEEAARHPARNLPDRAIF 243 Query: 252 LSGKPDIAMRRLMQGFGL 269 SG D + RL+ GFGL Sbjct: 244 TSGSKDPGLARLLAGFGL 261 >gi|90420932|ref|ZP_01228837.1| glutamate racemase [Aurantimonas manganoxydans SI85-9A1] gi|90334907|gb|EAS48679.1| glutamate racemase [Aurantimonas manganoxydans SI85-9A1] Length = 268 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 132/264 (50%), Positives = 184/264 (69%), Gaps = 7/264 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL+++R MP+ FIYVADD GFPYG+WE+ L R++ LF+++ Sbjct: 1 MNAPILVFDSGIGGLTVLRELRTAMPDRRFIYVADDAGFPYGDWEEEPLVARILDLFAEL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +D Y+P L+VIACNTA TL+ +LR+ F ++ F+G VPAIK A T+SGL+S+L+TP T Sbjct: 61 IDTYEPSLAVIACNTASTLVLPQLRARF-AIPFVGTVPAIKPATERTRSGLVSVLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILA-----SRVEEYACGIKIKEDEIKKEIEGCFIE 186 +RR YT +L+ ++ + C + LV S LA S ++ A G + +D + EI CF+E Sbjct: 120 VRRVYTRDLVEAFATHCEVRLVGSPELARLAERSLLDSEASGDQELDDAMAAEIAPCFVE 179 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 G+RTD++VLACTHYPLI + FR+L+PWPVDWLD +++IARRAR L + F Sbjct: 180 AGGQRTDIVVLACTHYPLIANHFRRLAPWPVDWLDPAEAIARRARSLCKPGSGELPEGF- 238 Query: 247 DHALFLSGKPDIAMRRLMQGFGLK 270 D A F G P MRRL++GFGL+ Sbjct: 239 DSAHFTGGAPGYQMRRLVRGFGLE 262 >gi|163759593|ref|ZP_02166678.1| glutamate racemase [Hoeflea phototrophica DFL-43] gi|162283190|gb|EDQ33476.1| glutamate racemase [Hoeflea phototrophica DFL-43] Length = 263 Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 121/260 (46%), Positives = 182/260 (70%), Gaps = 1/260 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +++FDSGIGGL VL++ R +MP F+YVADD GFPYG WE+ AL+ R++ LF+ ++ Sbjct: 3 ERPVVVFDSGIGGLSVLREARVIMPGRRFVYVADDAGFPYGAWEEGALRDRIVGLFAGLI 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K+ P L++IACNTA T++ LR+ +P + F+G VPAIK AA T+SGL+S+L+TP T+ Sbjct: 63 EKHNPALALIACNTASTIVMPALRAAYPELPFVGTVPAIKPAAERTKSGLVSVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT +LI Y + H+ LV S LA+ E Y + E +K EI+ CF+E++G++T Sbjct: 123 KRQYTRDLIRDYADKVHVRLVGSENLAALAETYMRKGFVDEAAVKAEIDPCFVERDGQKT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTHQTRVFDDHALF 251 D++VLACTH+P +V+ R+++PWPVDW+D +++IARRA ++ + H D +F Sbjct: 183 DIVVLACTHFPFLVNRMRKMAPWPVDWIDPAEAIARRALAIVDTLPGGHALPDARDSVVF 242 Query: 252 LSGKPDIAMRRLMQGFGLKS 271 SG PD + RLM GFGL + Sbjct: 243 TSGNPDYSALRLMHGFGLTA 262 >gi|240850640|ref|YP_002972040.1| glutamate racemase [Bartonella grahamii as4aup] gi|240267763|gb|ACS51351.1| glutamate racemase [Bartonella grahamii as4aup] Length = 272 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 126/261 (48%), Positives = 177/261 (67%), Gaps = 3/261 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL V ++ R L+PE FIYVADD GFPYGNW+++ LK+R++ +F+++L Sbjct: 3 ERPVLFFDSGIGGLTVFREARILIPEMQFIYVADDAGFPYGNWKENILKERILKIFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +Y P L VIACNT TL+ +LR F + F+G VPAIK AA T+SG IS+L+TP T+ Sbjct: 63 TRYNPALCVIACNTVSTLMMADLRQNFSHVPFVGTVPAIKSAAEQTKSGFISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT+ LI+S+ QCH+ LV S LA E+Y G I +E++KEI CF+EK G+ T Sbjct: 123 KRAYTNELINSFAGQCHVQLVGSKKLAGFAEDYLRGKSINSEELRKEILPCFVEKNGQYT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDDHA 249 DVIVLACTHYP +++ FR+ + W V+W+D + +IA+ R LLP +++ + + D A Sbjct: 183 DVIVLACTHYPFLINFFREHALWSVEWIDPAKAIAKHIRSLLPLSEKVHDQYIKKYQDFA 242 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 L S L +GFGLK Sbjct: 243 LLTSKNITSLTENLFKGFGLK 263 >gi|319408556|emb|CBI82209.1| Glutamate racemase [Bartonella schoenbuchensis R1] Length = 270 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 130/258 (50%), Positives = 177/258 (68%), Gaps = 1/258 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL V++++R L+ E+ FIYVADD GFPYG W + ALK+R++ +F+++L Sbjct: 3 ERPLLFFDSGIGGLTVVEEVRALISEFQFIYVADDAGFPYGIWSEDALKQRILKIFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y P+L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SGLIS+L+TP T+ Sbjct: 63 KLYNPILCVIACNTASTLVITDLRRKFPNILFVGTVPAIKLAAKKTKSGLISVLATPGTI 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI S+ +QCH+ LV S LA E Y G I + E++ EI CF+EK GK T Sbjct: 123 QRAYTHKLIDSFANQCHVQLVGSTKLAGFAENYLRGNPIDDKELRHEILPCFVEKNGKYT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTHQTRVFDDHALF 251 DVIVLACTHYP ++++F + + WPV W+D + +IARR R LL I + +D ALF Sbjct: 183 DVIVLACTHYPFLINLFHKQALWPVSWIDPAKAIARRTRSLLLEEIQNKNIKKHEDCALF 242 Query: 252 LSGKPDIAMRRLMQGFGL 269 S +A L+Q FG Sbjct: 243 TSQTIGVATEHLLQKFGF 260 >gi|319784057|ref|YP_004143533.1| glutamate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169945|gb|ADV13483.1| glutamate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 266 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 130/261 (49%), Positives = 175/261 (67%), Gaps = 4/261 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IL+FDSGIGGL VL++ R LMP+ FIYVADD FPYG WE+ AL+ ++ LF +L Sbjct: 3 ERPILMFDSGIGGLTVLREARVLMPDRRFIYVADDAAFPYGAWEEPALRVHILELFGKLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++ P +SVIACNTA TL+ D LR FP F+G VPAIK AA T+SGL+S+L+TP T+ Sbjct: 63 ERFAPAISVIACNTASTLVIDALRDRFPEHPFVGMVPAIKPAAERTRSGLVSVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E++ RT Sbjct: 123 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEIYMREGFVDEEAVRAEITPCFVERDALRT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF----DDH 248 D++VLACTHYP + + R+ +PWPVDWLD +++IARRA LL I+ D Sbjct: 183 DIVVLACTHYPFLANRMRKTAPWPVDWLDPAEAIARRALSLLADIDPSGRGEMLPEGPDL 242 Query: 249 ALFLSGKPDIAMRRLMQGFGL 269 A+F S + D RRLMQGFGL Sbjct: 243 AVFTSKRADFPTRRLMQGFGL 263 >gi|163868315|ref|YP_001609524.1| glutamate racemase [Bartonella tribocorum CIP 105476] gi|189082952|sp|A9IU96|MURI_BART1 RecName: Full=Glutamate racemase gi|161017971|emb|CAK01529.1| Glutamate racemase [Bartonella tribocorum CIP 105476] Length = 275 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 127/261 (48%), Positives = 179/261 (68%), Gaps = 3/261 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL VL++ R L+PE FIYVADD GFPYGNWE++ LK+ ++ +F+++L Sbjct: 3 ERPVLFFDSGIGGLTVLREARVLIPEIQFIYVADDAGFPYGNWEENILKEHILNIFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +Y P L VIACNT TL+ +LR FP + F+G VPAIK AA T+SG IS+L+TP T+ Sbjct: 63 TRYNPALCVIACNTVSTLMMADLRQKFPHVPFVGTVPAIKSAAEQTKSGFISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT+ LI+S+ QCH+ LV S LA E++ G I + ++KEI CF++K GK T Sbjct: 123 KRAYTNELINSFAGQCHVQLVGSEKLAGFAEDHLRGKTIDSEALRKEILPCFVKKNGKCT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDDHA 249 DVIVLACTHYP +++ FR+ + W V+W+D + +IA+ R LLP +I+ + + D A Sbjct: 183 DVIVLACTHYPFLINFFREQALWSVEWIDPAKAIAKHIRSLLPLSEKIHQKPIKKYQDFA 242 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 L S + L++GFGLK Sbjct: 243 LLTSKNITASTEHLLKGFGLK 263 >gi|49474225|ref|YP_032267.1| glutamate racemase [Bartonella quintana str. Toulouse] gi|81647061|sp|Q6FZU3|MURI_BARQU RecName: Full=Glutamate racemase gi|49239729|emb|CAF26111.1| Glutamate racemase [Bartonella quintana str. Toulouse] Length = 270 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 128/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IL FDSGIGGL VL+++R L+PE FIYVADD GFPYGNWE++ LK ++ +F+++L Sbjct: 3 ERPILFFDSGIGGLTVLREVRVLIPETQFIYVADDAGFPYGNWEENVLKNHILKVFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y P L V+ACNT TL+ +LR FP F+G VPAIK AA T+SG IS+L+TP T+ Sbjct: 63 TLYNPTLCVVACNTVSTLMMADLRKEFPHTLFVGTVPAIKLAAKQTKSGFISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI+S+ QCH+ LV S LA+ E+Y G I +E++ EI CF E+ GK T Sbjct: 123 KRAYTRELINSFAGQCHVQLVGSEKLAAFAEDYLRGKPIDLEELRNEILPCFFEQNGKYT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251 D IVLACTHYP ++++FR+ + WPV W+D + +IA+ R LLP R+ T+ D ALF Sbjct: 183 DTIVLACTHYPFLINLFREQALWPVKWIDPAKAIAKHIRSLLPERMYHKNTKKLKDFALF 242 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S + + L++ FGL Sbjct: 243 TSQNITSSTKHLLKEFGLN 261 >gi|319405660|emb|CBI79283.1| Glutamate racemase [Bartonella sp. AR 15-3] Length = 270 Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 127/259 (49%), Positives = 177/259 (68%), Gaps = 1/259 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL +L+++R + EY FIYVADD GFPYG WE+ L+ R++ +F+ +L Sbjct: 3 EQPLLFFDSGIGGLTILREVRLFVSEYQFIYVADDAGFPYGIWEEEMLRHRILKIFTYLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Y P L VIACNTA TL+ ++LR FP++ F+G VPAIK AA T+SG+IS+L+TP T+ Sbjct: 63 ELYNPALCVIACNTASTLMIEDLRREFPNIHFVGTVPAIKLAAEQTKSGVISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI+S+ QC++ LV S LA E Y G I +E++ EI CFIEK GK T Sbjct: 123 KRAYTHELINSFAGQCYVQLVGSEKLAGFAENYLRGYPINYEELRHEILPCFIEKNGKLT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251 D+IVLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP +I + + D LF Sbjct: 183 DIIVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPMKIQNKNMKEYTDFTLF 242 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S + L+Q F LK Sbjct: 243 TSQNISPSTENLLQKFHLK 261 >gi|319407232|emb|CBI80871.1| Glutamate racemase [Bartonella sp. 1-1C] Length = 270 Score = 268 bits (685), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 129/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + S+L FDSGIGGL +L+++R + EY FIY+AD+ GFPYG WE+ LK+R++ +F+ +L Sbjct: 3 EQSLLFFDSGIGGLTILREVRLFVSEYQFIYIADNEGFPYGIWEEEILKRRILKIFTYLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Y P L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SG+IS+L+TP+T+ Sbjct: 63 ELYNPALCVIACNTASTLMIKDLRRAFPNIRFVGTVPAIKLAAEQTKSGVISVLATPSTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI+S+ QCH+ LV S LA E Y G I +E+ EI CFIEK GK T Sbjct: 123 RCAYTHELINSFAGQCHVQLVGSEKLAGFAESYLHGYPINHEELHHEILPCFIEKNGKLT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251 D +VLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP I + D ALF Sbjct: 183 DTVVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPINIQNKNMKKHTDFALF 242 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S A L+Q F LK Sbjct: 243 TSQNISPATENLLQKFHLK 261 >gi|319404222|emb|CBI77815.1| Glutamate racemase [Bartonella rochalimae ATCC BAA-1498] Length = 270 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 127/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + S+L FDSGIGGL +L+++R + EY FIY+AD+ GFPYG WE+ LK+R++ +F+ +L Sbjct: 3 KQSLLFFDSGIGGLTILREVRLFVSEYQFIYIADNAGFPYGIWEEEILKRRILKIFTYLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Y P L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SG+IS+L+TP+T+ Sbjct: 63 ELYNPALCVIACNTASTLMIKDLRRAFPNIRFVGTVPAIKLAAEQTKSGVISVLATPSTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI+S+ QCH+ LV S LA E Y G + +E++ EI CFIEK K T Sbjct: 123 RCAYTHELINSFADQCHVQLVGSEKLAGFAENYLHGYPVNHEELRHEILPCFIEKNSKLT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251 D IVLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP + + D ALF Sbjct: 183 DTIVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPINVQNKNMKKHTDFALF 242 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S A L+Q F LK Sbjct: 243 TSQNISPATENLLQKFHLK 261 >gi|121602574|ref|YP_989115.1| glutamate racemase [Bartonella bacilliformis KC583] gi|166231026|sp|A1UT12|MURI_BARBK RecName: Full=Glutamate racemase gi|120614751|gb|ABM45352.1| glutamate racemase [Bartonella bacilliformis KC583] Length = 271 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 129/260 (49%), Positives = 173/260 (66%), Gaps = 2/260 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + ++ FDSGIGGL VL++ R L+PE F+YVADD GFPYG WE+ LK R++ +F+++L Sbjct: 3 EKPVIFFDSGIGGLTVLKEARILIPELQFVYVADDAGFPYGAWEEDVLKGRILKVFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y P L VIACNTA TL+ +LR FP + F+G VPAIK AAA T+SGLIS+L+TP T+ Sbjct: 63 KLYTPALCVIACNTASTLMISDLRQEFPHIPFVGTVPAIKSAAAQTKSGLISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI S+ +QCH+ LV S LA+ E Y G I +E++ EI CF+EK GK T Sbjct: 123 KRAYTHELISSFANQCHVELVGSKKLATFAENYLRGYPIDYEELRHEILPCFVEKNGKYT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHAL 250 DVIVLACTHYP ++ +F + + W V+W+D + +IAR R LL N + ++AL Sbjct: 183 DVIVLACTHYPFLISLFHKQALWSVNWIDPAKAIARHTRSLLLETMKNKSSKKNIKNYAL 242 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 F S D RL+Q F L Sbjct: 243 FTSQNIDFVTERLLQRFNLN 262 >gi|304391421|ref|ZP_07373363.1| glutamate racemase [Ahrensia sp. R2A130] gi|303295650|gb|EFL90008.1| glutamate racemase [Ahrensia sp. R2A130] Length = 260 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 120/255 (47%), Positives = 174/255 (68%), Gaps = 2/255 (0%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL VL++ R LMP + F+YVADD FPYG+WE AL +R+M +F D++ + Sbjct: 2 TVLVFDSGLGGLSVLREARILMPGHRFVYVADDAAFPYGDWEAEALVERMMEVFEDLVTR 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++P + ++ACNTA T+I LRS F +G VPAIK AA T SG IS+L+TP T++R Sbjct: 62 FEPSMIIVACNTASTIILPHLRSRF-DFPVVGTVPAIKLAAELTASGHISVLATPGTVQR 120 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT +LI + S ++ LV + +A E + + + +K EIE CF+++ G RTDV Sbjct: 121 DYTRSLISEFASTVNVRLVGAEKMAGLAEHFMLTGETDTEAVKSEIEDCFVDQYGARTDV 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VLACTHYP + +V+R+L+PWPVDWL+ +++IAR A+ LLP + D A F G Sbjct: 181 VVLACTHYPFLTNVYRRLAPWPVDWLNPAEAIARHAKSLLPD-GDQPVKPIQDLAHFTGG 239 Query: 255 KPDIAMRRLMQGFGL 269 KPD+ +RL+ GFGL Sbjct: 240 KPDVLRQRLLSGFGL 254 >gi|254502214|ref|ZP_05114365.1| glutamate racemase [Labrenzia alexandrii DFL-11] gi|222438285|gb|EEE44964.1| glutamate racemase [Labrenzia alexandrii DFL-11] Length = 260 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 114/247 (46%), Positives = 160/247 (64%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL VL++ R+L+P +YVADD FP G W + L RL F+ +++ + P VI Sbjct: 1 MGGLTVLREARYLLPCERLLYVADDAAFPIGRWPEEDLLVRLQDQFTRLIEDHDPKAVVI 60 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 ACNTAFTL LR FP + F+G VPAIK AA T SGLIS+L+TP T+RR YT +LI Sbjct: 61 ACNTAFTLGGVALREAFPGVPFVGTVPAIKPAAERTASGLISVLATPGTVRRAYTRSLIE 120 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 S+ +QCH+ LV S LA E++ G + ++ + EI CF+E+ G+RTD++VLACTHY Sbjct: 121 SFAAQCHVRLVGSDNLAELAEQHLRGEPVSDEALLPEISDCFLEQNGQRTDIVVLACTHY 180 Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262 P + + FR+++PWPVDWLD +++IAR+ +L + D A+ SG A+ R Sbjct: 181 PFLANRFRKIAPWPVDWLDPAEAIARQLVRVLGQDLASVPSESPDLAILTSGARKPAIER 240 Query: 263 LMQGFGL 269 L+ GFGL Sbjct: 241 LLAGFGL 247 >gi|323136843|ref|ZP_08071924.1| glutamate racemase [Methylocystis sp. ATCC 49242] gi|322398160|gb|EFY00681.1| glutamate racemase [Methylocystis sp. ATCC 49242] Length = 267 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 112/260 (43%), Positives = 166/260 (63%), Gaps = 4/260 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL V ++ + P ++Y ADD GFPYG+W++ L R+M + ++ ++ Sbjct: 7 ILVFDSGLGGLTVFAEIVKIRPGADYVYCADDAGFPYGSWKEPELVDRVMKVMERLIAEH 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + VIACNTA TL+ LR+ +P + F+G VPAIK AA +++S +IS+L+TP T+ R Sbjct: 67 APDMVVIACNTASTLVLPCLRARWPEIPFVGTVPAIKPAAEHSRSKMISVLATPGTVARD 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT NLI + + C + LV S LA E Y + ++EI EI CF E +G+RTDV+ Sbjct: 127 YTQNLIAQFAADCRVALVGSTTLARLAENYMHHGSVCDEEIAAEIAPCFQESDGRRTDVV 186 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDDHALFL 252 VLACTHYPL++ F++L+PWPV+W+D + +IARRA LL + + R A+F Sbjct: 187 VLACTHYPLLLDAFQRLAPWPVEWIDPAPAIARRADQLLAGRFGRDESEPRAAPGRAVFT 246 Query: 253 SG-KPDIAMRRLMQGFGLKS 271 SG P +R + +GL + Sbjct: 247 SGAAPAPQLRETLARYGLAA 266 >gi|217976585|ref|YP_002360732.1| glutamate racemase [Methylocella silvestris BL2] gi|217501961|gb|ACK49370.1| glutamate racemase [Methylocella silvestris BL2] Length = 279 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 102/214 (47%), Positives = 141/214 (65%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL V ++ L P+ F+Y AD+ GFPYG AL R++ + ++D + Sbjct: 7 ILVFDSGLGGLTVFAEIAALRPDAQFVYAADEAGFPYGALPATALAPRVLAVMGRLIDLF 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P ++VIACNTA TL+ LR+ FP + F+G VPAIK AA +QS +IS+L+TP T+ R Sbjct: 67 SPDVAVIACNTASTLVLPHLRAAFPDLPFVGTVPAIKPAAQTSQSKMISVLATPGTVARD 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI +Y + C + LV S LAS E++ G + I EI F+E EG+RTD I Sbjct: 127 YTRGLIEAYAADCKVMLVGSSRLASLAEDFMQGDAPSDAAILDEIAPAFVEAEGRRTDAI 186 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 LACTHYPL++ F +L+PWPV W+D + +IARR Sbjct: 187 ALACTHYPLLIAQFERLAPWPVAWIDPAPAIARR 220 >gi|296448272|ref|ZP_06890166.1| glutamate racemase [Methylosinus trichosporium OB3b] gi|296254224|gb|EFH01357.1| glutamate racemase [Methylosinus trichosporium OB3b] Length = 280 Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 110/242 (45%), Positives = 154/242 (63%), Gaps = 3/242 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL V ++ L P +Y ADD GFPYG + AL R+M + ++ + Sbjct: 13 ILVFDSGLGGLTVFVEVAKLRPHATLLYCADDAGFPYGPLSEEALVARVMLVMESLVAAH 72 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P L VIACNTA T + LR+ +P++ F+G VPA+K AA ++S LIS+L+TP T+ R Sbjct: 73 APDLVVIACNTASTRVLPHLRARWPNLPFVGTVPAVKPAAERSRSRLISVLATPGTVTRD 132 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDV 194 YT LI S+ C LV S LA E++ G + E EI EI CF+++ +G RTDV Sbjct: 133 YTRALIASFAEGCEATLVGSSRLAPIAEDFLRGAAVSEAEIAAEIAPCFVQRPDGARTDV 192 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFD-DHALFL 252 +VLACTHYPL++ FR+L+PWPV+W+D + +IAR+A R LL R + + A+F Sbjct: 193 VVLACTHYPLLLDFFRRLAPWPVEWIDPAPAIARQADRLLLQRFGADRIGFREPPRAIFT 252 Query: 253 SG 254 SG Sbjct: 253 SG 254 >gi|312113587|ref|YP_004011183.1| glutamate racemase [Rhodomicrobium vannielii ATCC 17100] gi|311218716|gb|ADP70084.1| glutamate racemase [Rhodomicrobium vannielii ATCC 17100] Length = 282 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 137/221 (61%), Gaps = 1/221 (0%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + K +L DSG+GGL VL+ R +PE +++ADD FPYG+ + L +RL+ L Sbjct: 3 DSKRAARLLFLDSGLGGLTVLRAARAAIPEAEVLFIADDAAFPYGSKPEGELVERLLDLV 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 L ++P V+ACNTA T+ LR+ F S+ F+G VPAIK AAA T+SGL+S+L+T Sbjct: 63 GGALAAFEPDCVVLACNTASTVALSALRAAF-SVPFVGTVPAIKPAAAITRSGLVSVLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 P T+ R YT LI Y + LV + LA E+YA G + + I +EI CF+E Sbjct: 122 PGTVAREYTHTLIEKYALGARVALVGAANLAELAEDYASGETVSDAAIAREIAPCFVEDA 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 RTDV+VL CTHYPL++ LSPWPV WLD + +IARR Sbjct: 182 DARTDVVVLGCTHYPLLLERLDALSPWPVTWLDPAPAIARR 222 >gi|170740490|ref|YP_001769145.1| glutamate racemase [Methylobacterium sp. 4-46] gi|168194764|gb|ACA16711.1| glutamate racemase [Methylobacterium sp. 4-46] Length = 290 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 101/242 (41%), Positives = 150/242 (61%), Gaps = 2/242 (0%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL VL ++R P+ +Y ADD FPYG+ + L R++ + ++ Sbjct: 22 AVLVFDSGLGGLTVLSELRRARPDARIVYAADDAAFPYGDLSEEMLVARVVAVMERLVAA 81 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P L V+ACNTA TL+ LR+ F ++ F+G VPAIK AAA T++G IS+L+TP T+RR Sbjct: 82 HAPDLVVVACNTATTLVLPALRARF-AVPFVGTVPAIKPAAAATRTGRISVLATPGTVRR 140 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI +Y C + LV + LA+ E G + +D +++EI CF+ + RTDV Sbjct: 141 DYTRELIDAYAGTCAVTLVGATRLAALAEADLAGCPVDDDVLREEIAPCFVGEGSARTDV 200 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALFLS 253 +VL CTHYPL++ F +L+PWPV W+D + ++ARR LL P A+F Sbjct: 201 VVLGCTHYPLLLARFERLAPWPVTWIDPAPAVARRMAALLGPAPRGTDPEATPGLAVFTG 260 Query: 254 GK 255 G+ Sbjct: 261 GE 262 >gi|182678309|ref|YP_001832455.1| glutamate racemase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634192|gb|ACB94966.1| glutamate racemase [Beijerinckia indica subsp. indica ATCC 9039] Length = 287 Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 139/214 (64%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V ++ L P+ ++Y ADD FPYG + AL R++ + ++ Y Sbjct: 10 LLIFDSGLGGLTVFAEILRLRPQADYLYAADDAAFPYGAMSEEALITRVLDVMGRLIASY 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P VIACNTA TL+ LR+ +P + F+G VPA+K A ++S LIS+L+TP T+ R Sbjct: 70 APDAVVIACNTASTLVLPHLRAAYPDLPFVGTVPAVKPAGEISRSHLISVLATPGTVARD 129 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT L+ +Y S C + LV S LA E G + ++ I EI CF++ +G+RTD + Sbjct: 130 YTHELVRTYASHCAVTLVGSRKLAGLAEAMMKGESVPDEAIAHEIAPCFVDFDGRRTDCV 189 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VLACTH+PL+ F++L+PWPV+W+D + +IARR Sbjct: 190 VLACTHFPLLTDHFQRLAPWPVEWIDPAPAIARR 223 >gi|299131717|ref|ZP_07024912.1| glutamate racemase [Afipia sp. 1NLS2] gi|298591854|gb|EFI52054.1| glutamate racemase [Afipia sp. 1NLS2] Length = 265 Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 109/254 (42%), Positives = 157/254 (61%), Gaps = 4/254 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL VL+++ P+ + YVADD FPYG E+ A+ R++ L D++ + Sbjct: 6 AILVFDSGLGGLTVLREITTARPDAAYTYVADDAFFPYGRHEESAIIARVVPLIGDLIGR 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P L VIACNTA TL+ D LR + S+ F+G VPAIK A A +++ +S+L T T++R Sbjct: 66 HTPDLVVIACNTASTLVMDHLRKAY-SVPFVGTVPAIKPACASSKTKRVSVLGTRGTVKR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + C + LV + LA+ E G + +D I EI CFIE RTD Sbjct: 125 EYTKKLIADFAHDCEVTLVGAGNLATLAEAALRGESVSDDAILAEIAPCFIEGS-PRTDT 183 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VLACTHYPL++ R+++PW VDW+D + +IARR LL + + ++ LF SG Sbjct: 184 VVLACTHYPLLLEQIRRIAPWTVDWIDPAPAIARRVESLLDK-SENENIPAPAKFLFTSG 242 Query: 255 K-PDIAMRRLMQGF 267 K P A+ R +Q F Sbjct: 243 KSPSPALMRALQPF 256 >gi|46204044|ref|ZP_00050583.2| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1] Length = 277 Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 102/240 (42%), Positives = 146/240 (60%), Gaps = 2/240 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL VL+++R P+ H++Y ADD FPYG + L R++ + +L +Y Sbjct: 10 ILVFDSGLGGLTVLEQVRRARPDAHYLYAADDAAFPYGRLSEPQLVARVIAVMERLLTRY 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P L VIACNTA T++ LR F F+G VP IK AAA T+S L+S+L+TP T+ R Sbjct: 70 APDLVVIACNTASTVVLPALRQRF-VTPFVGVVPPIKPAAALTRSRLVSLLATPGTVARA 128 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKRTDV 194 YT +L+ ++ + C + LV S LA E G + + I EI CF+ +G+RTDV Sbjct: 129 YTHDLVENFAADCAVTLVGSQNLARYAEAEMAGAPVADAAILAEIAPCFVTGADGRRTDV 188 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 + L+CTHYPL++ F +L+PWPV W+D + +IARR LL + A+F G Sbjct: 189 VCLSCTHYPLLLGRFERLAPWPVIWIDPAPAIARRVVQLLGAALAARPEPPAARAIFTGG 248 >gi|220920402|ref|YP_002495703.1| glutamate racemase [Methylobacterium nodulans ORS 2060] gi|219945008|gb|ACL55400.1| glutamate racemase [Methylobacterium nodulans ORS 2060] Length = 312 Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 100/220 (45%), Positives = 143/220 (65%), Gaps = 1/220 (0%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL VL ++R P+ +Y ADD FPYG+ + AL R++ + ++ Sbjct: 43 AVLVFDSGLGGLTVLAEVRRARPDARVVYAADDAAFPYGDLSEPALVARVVAVMERLIAL 102 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P L V+ACNTA TL+ LR+ F ++ F+G VPAIK AAA T+SGLIS+L+TP T+RR Sbjct: 103 HAPDLVVVACNTATTLVLPALRARF-AIPFVGTVPAIKPAAAATRSGLISVLATPGTVRR 161 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI +Y + LV + LA+ E G + +D +++EI CF+ RTDV Sbjct: 162 DYTRELIDAYAGAYAVTLVGATRLAAFAEAELAGTPVGDDLLREEIAPCFVGAGESRTDV 221 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTHYPL++ F +L PWPV W+D + +IARR LL Sbjct: 222 VVLGCTHYPLLLRRFERLVPWPVTWIDPAPAIARRMAQLL 261 >gi|154247770|ref|YP_001418728.1| glutamate racemase [Xanthobacter autotrophicus Py2] gi|154161855|gb|ABS69071.1| glutamate racemase [Xanthobacter autotrophicus Py2] Length = 305 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 95/215 (44%), Positives = 138/215 (64%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL V +++ + P+ HFIY ADD FPYG D L R+ + + ++ + Sbjct: 33 TILVFDSGLGGLSVFREVARVRPDAHFIYAADDAAFPYGALADDTLVDRINRVVNRLIGE 92 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P L VIACNTA TL LR+ P++ F+G VPAIK A +++ +S+L+TP T+RR Sbjct: 93 VRPDLVVIACNTASTLALPSLRAAHPTLPFIGTVPAIKPACIASRTKRVSVLATPGTVRR 152 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT+ L+ + S C + LV S LA E G + + +I EI CF+ G+RTD Sbjct: 153 DYTAALVREFASGCDVALVPSDRLAGLAEAAMAGDPVDDCDIVAEIAPCFVNSGGRRTDT 212 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +VLACTHYPLI+ +L+PWPV ++D + +IARR Sbjct: 213 VVLACTHYPLILDRLTRLAPWPVTFIDPAPAIARR 247 >gi|209884599|ref|YP_002288456.1| glutamate racemase [Oligotropha carboxidovorans OM5] gi|209872795|gb|ACI92591.1| glutamate racemase [Oligotropha carboxidovorans OM5] Length = 264 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 97/224 (43%), Positives = 146/224 (65%), Gaps = 2/224 (0%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + +IL+FDSG+GGL VL+++ P+ + YVADD FPYG E+ + R++ L D Sbjct: 2 SIPRAILVFDSGLGGLTVLREIAAARPDAAYTYVADDAFFPYGQHEEDEIIARVVPLIGD 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++D+++P L VIACNTA TL+ D LR + S+ F+G VPAIK A A +++ +S+L T Sbjct: 62 LIDRHRPDLVVIACNTASTLVMDHLRKAY-SVPFVGTVPAIKPACAASKTKKVSVLGTRG 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++R YT LI ++ C + LV + LAS E G I +D ++ EI CF+E + Sbjct: 121 TVKREYTRTLIRNFAQGCDVTLVGAENLASLAERALRGEAISDDAVRAEIAACFVE-DSP 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 RTD +VLACTHYPL++ ++++PWPV W+D + +IARR L+ Sbjct: 180 RTDTVVLACTHYPLLLEQIQRIAPWPVAWIDPAPAIARRVVSLI 223 >gi|91976246|ref|YP_568905.1| glutamate racemase [Rhodopseudomonas palustris BisB5] gi|91682702|gb|ABE39004.1| glutamate racemase [Rhodopseudomonas palustris BisB5] Length = 266 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 109/258 (42%), Positives = 156/258 (60%), Gaps = 6/258 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL VL+++ P+ H Y ADD FPYG + AL R++ L +++D Sbjct: 6 NILVFDSGLGGLTVLREIVKARPDAHVTYAADDAFFPYGQHSEEALVGRVVPLIGELIDA 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P L VIACNTA TL+ LR+ + S+ F+G VPAIK A A +++ +S+L T T++R Sbjct: 66 HTPALVVIACNTASTLVLSHLRAAY-SVPFVGTVPAIKPACAASKTKRVSVLGTSGTVKR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + C + LV S LA+ E G + ++ I+ EI CF++ +G RTD Sbjct: 125 EYTRALIRDFAGGCDVTLVGSAHLAALAEAALGGADVADEAIRAEIAPCFVDADGSRTDT 184 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA----L 250 IVLACTHYPL++ +L+PWPVDW+D + +IARR LL + Q+ DH + Sbjct: 185 IVLACTHYPLLLDRLMRLAPWPVDWIDPAPAIARRVVTLL-GPGSGQSDHQSDHPGAEMV 243 Query: 251 FLSGKPDIAMRRLMQGFG 268 F SG+P L FG Sbjct: 244 FTSGRPPRFTAALAPYFG 261 >gi|158423846|ref|YP_001525138.1| glutamate racemase [Azorhizobium caulinodans ORS 571] gi|158330735|dbj|BAF88220.1| glutamate racemase [Azorhizobium caulinodans ORS 571] Length = 288 Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 95/220 (43%), Positives = 138/220 (62%), Gaps = 1/220 (0%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL V +++ P+ FIY ADD FPYG D AL R+ + ++ Sbjct: 22 TILVFDSGLGGLSVFREVARARPDASFIYAADDAAFPYGALSDAALVARVSSVMDTLIAA 81 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P L V+ACNTA TL LR+ + F+G VPA+K A A + + +S+L+TP T+RR Sbjct: 82 TRPTLVVVACNTASTLALPTLRAAH-GLPFVGTVPAVKPACAASVTRKVSVLATPGTVRR 140 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT++L+ + C + LV S LA E G I +++++ EI CF+ E RTD Sbjct: 141 DYTASLVRDFAGSCEVTLVPSPRLAELAEAVMRGAAIDDEDLRAEIAPCFVRSETGRTDT 200 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VLACTHYPLIV R+++PWPV+++D + +IARR LL Sbjct: 201 VVLACTHYPLIVDQLRRVAPWPVNFVDPAPAIARRVASLL 240 >gi|254470122|ref|ZP_05083526.1| glutamate racemase [Pseudovibrio sp. JE062] gi|211960433|gb|EEA95629.1| glutamate racemase [Pseudovibrio sp. JE062] Length = 257 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 94/228 (41%), Positives = 142/228 (62%), Gaps = 1/228 (0%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E + +L+ DSG+GGL V ++++ +P+ +Y+AD FPYG+WE AL+ + L Sbjct: 16 EPDVSGRVLVLDSGVGGLSVQREIKRALPDAGLLYLADRAAFPYGDWEADALRDHIASLV 75 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + + D +QP V+ACNTA TL+ LR F + +G VPAIK AA T+SG+ ++L+T Sbjct: 76 NSVSDVWQPSAVVVACNTASTLVLQRLRE-FLDVPVVGTVPAIKPAAQKTKSGVFAVLAT 134 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 P T++R YT +LI + + HI LV + LA+ E+ + D ++ EI CF+EK Sbjct: 135 PGTVKRDYTQDLIIDFAPEHHIALVGATGLAALAEDKLASRAVDLDRLRHEIAPCFVEKS 194 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 G+RTD +VL CTHYP + Q++PWPV W+D + +IARR +L R Sbjct: 195 GERTDCVVLGCTHYPFLQEEMEQVAPWPVTWIDPAPAIARRLTDVLER 242 >gi|170747215|ref|YP_001753475.1| glutamate racemase [Methylobacterium radiotolerans JCM 2831] gi|170653737|gb|ACB22792.1| glutamate racemase [Methylobacterium radiotolerans JCM 2831] Length = 291 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 94/218 (43%), Positives = 138/218 (63%), Gaps = 2/218 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +IL+FDSG+GGL VL +R P+ ++YV DD FPYG + L R++ + ++ Sbjct: 21 EPTILVFDSGLGGLTVLDAVRRARPDARYVYVGDDAAFPYGRLSEATLVARVLTVMERLV 80 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++P L VIACNTA TL+ LR F + F+G VP IK AA T+S L+++L+TP T+ Sbjct: 81 ATHRPDLVVIACNTASTLVLPALRQRF-TTPFVGVVPPIKPAAEATRSRLVTLLATPGTV 139 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEGKR 191 R+YT +LI +Y C + LV S LA E G + + + EI CF+ E +G+R Sbjct: 140 ARSYTHDLIATYAGTCAVTLVGSQNLAGFAEAELAGAPVDDAALAAEIAPCFVAEADGRR 199 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 TDV+ LACTHYPL++ + ++PWPV W+D + +IARR Sbjct: 200 TDVVCLACTHYPLLLPRLQAVAPWPVTWIDPAPAIARR 237 >gi|115523653|ref|YP_780564.1| glutamate racemase [Rhodopseudomonas palustris BisA53] gi|115517600|gb|ABJ05584.1| glutamate racemase [Rhodopseudomonas palustris BisA53] Length = 278 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 107/256 (41%), Positives = 155/256 (60%), Gaps = 4/256 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL VL+++ L P+ H++YVADD FPYG + A+ R++ L +++ Sbjct: 6 TILVFDSGLGGLTVLREITKLRPDAHYVYVADDAFFPYGQHGEEAIIARVVPLIGEMIAA 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P L VIACNTA TL+ LR+ + + F+G VPAIK A A +QS +S+L T T++R Sbjct: 66 HAPDLVVIACNTASTLVLSHLRAAY-GVPFVGTVPAIKPACAGSQSKRVSVLGTRGTVQR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EGKRT 192 YT LI + C + LV S LA+ E G ++ + EI EI CF+ + G RT Sbjct: 125 EYTKALIRDFAQNCAVTLVGSAHLAALAEAALGGAEVTDAEILAEIAPCFVAEPDHGPRT 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VLACTHYPL++ +L+PWPV+W+D + +IARR LL + H R + Sbjct: 185 DTVVLACTHYPLLLDRLERLAPWPVNWIDPAPAIARRVSTLLAGVQGHADRA-GAQMIMT 243 Query: 253 SGKPDIAMRRLMQGFG 268 SG+P L+ FG Sbjct: 244 SGRPHPLASVLLPFFG 259 >gi|27380813|ref|NP_772342.1| glutamate racemase [Bradyrhizobium japonicum USDA 110] gi|27353978|dbj|BAC50967.1| glutamate racemase [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 99/223 (44%), Positives = 142/223 (63%), Gaps = 4/223 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ + + R++ L +++ Sbjct: 6 TILVFDSGLGGLTVLREVVATRPDAHYVYVADDAFFPYGHHSEDEIIARVVPLMGELIGT 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P L VIACNTA TL+ LR+ + S+ F+G VPAIK A A ++S +S+L T T++R Sbjct: 66 HDPDLVVIACNTASTLVLSHLRTAY-SLPFVGTVPAIKPACAQSKSRRVSVLGTKGTVKR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI---EKEGKR 191 YT LI + C + LV S LAS E G I +D+I E+ CF+ G R Sbjct: 125 EYTKALIRDFAQGCEVTLVGSPELASLAERALGGHPISDDDILAELTPCFVGDAADAGAR 184 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 TD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL Sbjct: 185 TDTVVLACTHYPLLLDRLTRLAPWPVDWIDPAPAIARRVSDLL 227 >gi|39934662|ref|NP_946938.1| glutamate racemase [Rhodopseudomonas palustris CGA009] gi|39648512|emb|CAE27033.1| putative glutamate racemase [Rhodopseudomonas palustris CGA009] Length = 264 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 104/256 (40%), Positives = 152/256 (59%), Gaps = 4/256 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++ Sbjct: 6 TILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIAA 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P L VIACNTA T+ LR+ + + F+G VPAIK A A +++ +S+L T AT+R Sbjct: 66 HAPDLVVIACNTASTMTLAPLRARY-RVPFVGTVPAIKPACAGSRTKRVSVLGTSATVRL 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RT 192 YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + K RT Sbjct: 125 EYTRALIRDFAQGCEVSLVGSIRLATLAETALGGGEVTDAAIRAEIAPCFVEADAKRGRT 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F Sbjct: 185 DAVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGPATGHAP-TPGAEMIFT 243 Query: 253 SGKPDIAMRRLMQGFG 268 SG+ A L FG Sbjct: 244 SGRHPRASAALAPYFG 259 >gi|316935236|ref|YP_004110218.1| glutamate racemase [Rhodopseudomonas palustris DX-1] gi|315602950|gb|ADU45485.1| glutamate racemase [Rhodopseudomonas palustris DX-1] Length = 264 Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 103/256 (40%), Positives = 151/256 (58%), Gaps = 4/256 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++ Sbjct: 6 TILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIAA 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P L VIACNTA T+ LR+ + + F+G VPAIK A A +++ +S+L T AT+R Sbjct: 66 HAPDLVVIACNTASTMTLAPLRARY-RVPFVGTVPAIKPACARSRTKRVSVLGTSATVRL 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RT 192 YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + RT Sbjct: 125 EYTRALIRDFAQGCEVSLVGSVRLATLAETALGGGEVTDAAIRAEIAPCFVEADATRGRT 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F Sbjct: 185 DSVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGEATGHAASP-KAEMIFT 243 Query: 253 SGKPDIAMRRLMQGFG 268 SG+ A L FG Sbjct: 244 SGRQPRASAGLAPYFG 259 >gi|192290178|ref|YP_001990783.1| glutamate racemase [Rhodopseudomonas palustris TIE-1] gi|192283927|gb|ACF00308.1| glutamate racemase [Rhodopseudomonas palustris TIE-1] Length = 264 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 103/256 (40%), Positives = 151/256 (58%), Gaps = 4/256 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++ Sbjct: 6 TILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIAA 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P L VIACNTA T+ LR+ + + F+G VPAIK A +++ +S+L T AT+R Sbjct: 66 HAPDLVVIACNTASTMTLAPLRARY-RVPFVGTVPAIKPACTGSRTKRVSVLGTSATVRL 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RT 192 YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + K RT Sbjct: 125 EYTRALIRDFAQGCEVSLVGSIRLATLAETALGGGEVTDAAIRAEIAPCFVEADAKRGRT 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F Sbjct: 185 DAVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGPATGHAP-TPGAEMIFT 243 Query: 253 SGKPDIAMRRLMQGFG 268 SG+ A L FG Sbjct: 244 SGRHPRASAALAPYFG 259 >gi|146339801|ref|YP_001204849.1| glutamate racemase [Bradyrhizobium sp. ORS278] gi|146192607|emb|CAL76612.1| glutamate racemase [Bradyrhizobium sp. ORS278] Length = 265 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 109/263 (41%), Positives = 153/263 (58%), Gaps = 13/263 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ + AL R++ L +++ Sbjct: 4 RPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSEPALVARVVPLMGELI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++P L VIACNTA LR+ + + F+G VPAIK A A +++ +S+L T AT+ Sbjct: 64 SAHRPDLIVIACNTASVQTLAPLRAAY-ATPFVGTVPAIKPACAQSRTKRVSVLGTKATV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG--- 189 +R YT LI + C + LV S LAS E G + +D I EI CF G Sbjct: 123 QREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTGVSDDAIAMEIAPCFTGDAGDPT 182 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 RTD +VLACTHYPL++ ++L+PWPV W+D + +IARR LL RV DH Sbjct: 183 ARTDAVVLACTHYPLLLDRLQRLAPWPVAWIDPAPAIARRVVDLL---GPQSGRV--DHG 237 Query: 250 ----LFLSGKPDIAMRRLMQGFG 268 +F S KP R L FG Sbjct: 238 GATMIFTSNKPHQLSRVLTPYFG 260 >gi|298292133|ref|YP_003694072.1| glutamate racemase [Starkeya novella DSM 506] gi|296928644|gb|ADH89453.1| glutamate racemase [Starkeya novella DSM 506] Length = 280 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 92/229 (40%), Positives = 137/229 (59%), Gaps = 1/229 (0%) Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 +P +IL+FDSG+GGL V +++ P+ F+Y ADD GFPYG + L R++ Sbjct: 7 HPSAALRAPTILVFDSGLGGLSVFRELARTRPDARFVYAADDAGFPYGARSEDDLVARVL 66 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125 + ++ + P VIACNTA TL+ LR+ + S+ F+G VPAIK A + + +S+ Sbjct: 67 AVMDALVARLAPDAVVIACNTASTLVLPALRARY-SIPFVGTVPAIKPACEGSLTKQVSV 125 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+TP T++R YT LI + C + LV S LA E G K+ ++E EI F+ Sbjct: 126 LATPGTVKRDYTQALIRDFAGACRVTLVGSTRLAGLAEAAMVGEKVADEEFAAEIAPAFV 185 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + RTD +VLACTHYPL++ ++++PWPV W+D + +IARR LL Sbjct: 186 REGKSRTDTVVLACTHYPLVLDRLQKVAPWPVRWVDPAPAIARRLSSLL 234 >gi|188582653|ref|YP_001926098.1| glutamate racemase [Methylobacterium populi BJ001] gi|179346151|gb|ACB81563.1| glutamate racemase [Methylobacterium populi BJ001] Length = 286 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 100/226 (44%), Positives = 145/226 (64%), Gaps = 2/226 (0%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + + L R++ + Sbjct: 13 QNAQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGAFTEERLVSRVIAVME 72 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T+S LIS+L+TP Sbjct: 73 RLLARHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRSRLISLLATP 131 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188 T+ R YT +L+ ++ + C + LV S LA E G + + + EI CF+E+ + Sbjct: 132 GTVARAYTHDLVRNFAAHCAVTLVGSKNLAGYAEAEMAGEPVSDAALLAEIAPCFVEQAD 191 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 G+RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL Sbjct: 192 GRRTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLL 237 >gi|254562390|ref|YP_003069485.1| glutamate racemase [Methylobacterium extorquens DM4] gi|254269668|emb|CAX25640.1| glutamate racemase [Methylobacterium extorquens DM4] Length = 291 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 108/260 (41%), Positives = 154/260 (59%), Gaps = 3/260 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + +L Sbjct: 21 QPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVMERLL 80 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP T+ Sbjct: 81 LRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATPGTV 139 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKR 191 R YT +L+ ++ C + LV S LA E G + + I EI CF+E +G R Sbjct: 140 ARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVTDAAILAEIAPCFVEGPDGAR 199 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H A+F Sbjct: 200 TDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPACAVF 259 Query: 252 LSGKP-DIAMRRLMQGFGLK 270 G + A+ R ++ GL Sbjct: 260 TGGAGLNPALGRSLERRGLS 279 >gi|240139965|ref|YP_002964442.1| glutamate racemase [Methylobacterium extorquens AM1] gi|240009939|gb|ACS41165.1| glutamate racemase [Methylobacterium extorquens AM1] Length = 291 Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 108/260 (41%), Positives = 154/260 (59%), Gaps = 3/260 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + +L Sbjct: 21 QPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVMERLL 80 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP T+ Sbjct: 81 LRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATPGTV 139 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKR 191 R YT +L+ ++ C + LV S LA E G + + I EI CF+E +G R Sbjct: 140 ARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGADGAR 199 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H A+F Sbjct: 200 TDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPACAVF 259 Query: 252 LSGKP-DIAMRRLMQGFGLK 270 G + A+ R ++ GL Sbjct: 260 TGGAGLNPALGRSLERRGLS 279 >gi|90423117|ref|YP_531487.1| glutamate racemase [Rhodopseudomonas palustris BisB18] gi|90105131|gb|ABD87168.1| glutamate racemase [Rhodopseudomonas palustris BisB18] Length = 265 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 95/220 (43%), Positives = 140/220 (63%), Gaps = 1/220 (0%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL VL+++ P+ ++YVADD FPYG + AL R++ L +++ Sbjct: 6 TILVFDSGLGGLTVLREIVKARPDAGYVYVADDAFFPYGQHGEDALIARVVPLIGELIAA 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++P L VIACNTA TL+ LR+ + + F+G VPAIK A A +++ +S+L T T++R Sbjct: 66 HRPDLVVIACNTASTLVLSHLRAAY-KVPFVGTVPAIKPACAASRTKRVSVLGTSGTVKR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + C + LV S LA+ E G + + +I EI CF++ G RTD Sbjct: 125 EYTRALIRDFAQACKVTLVGSAHLAALAEAALAGASVGDAQILAEIAPCFVDDGGARTDA 184 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VLACTH+PL++ L+PWPVDW+D + +IARR LL Sbjct: 185 VVLACTHFPLLLDRLVALAPWPVDWIDPAPAIARRVANLL 224 >gi|218531473|ref|YP_002422289.1| glutamate racemase [Methylobacterium chloromethanicum CM4] gi|218523776|gb|ACK84361.1| glutamate racemase [Methylobacterium chloromethanicum CM4] Length = 286 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 107/260 (41%), Positives = 153/260 (58%), Gaps = 3/260 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + +L Sbjct: 16 QPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEERLVARVIAVMERLL 75 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP T+ Sbjct: 76 LRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATPGTV 134 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKR 191 R YT +L+ ++ C + LV S LA E G + + I EI CF+E +G Sbjct: 135 ARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGADGAC 194 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H A+F Sbjct: 195 TDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPACAVF 254 Query: 252 LSGKP-DIAMRRLMQGFGLK 270 G + A+ R ++ GL Sbjct: 255 TGGAGLNPALGRSLERRGLS 274 >gi|163852632|ref|YP_001640675.1| glutamate racemase [Methylobacterium extorquens PA1] gi|163664237|gb|ABY31604.1| glutamate racemase [Methylobacterium extorquens PA1] Length = 291 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 107/260 (41%), Positives = 153/260 (58%), Gaps = 3/260 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + +L Sbjct: 21 QPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVMERLL 80 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP T+ Sbjct: 81 LRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATPGTV 139 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKR 191 R YT +L+ ++ C + LV S LA E G + + I EI CF+E +G Sbjct: 140 ARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGADGAY 199 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H A+F Sbjct: 200 TDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPACAVF 259 Query: 252 LSGKP-DIAMRRLMQGFGLK 270 G + A+ R ++ GL Sbjct: 260 TGGAGLNPALGRSLERRGLS 279 >gi|148256679|ref|YP_001241264.1| glutamate racemase [Bradyrhizobium sp. BTAi1] gi|146408852|gb|ABQ37358.1| glutamate racemase [Bradyrhizobium sp. BTAi1] Length = 265 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 95/225 (42%), Positives = 137/225 (60%), Gaps = 4/225 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ AL R++ L +++ Sbjct: 4 RPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSQEALIARVVPLMGELI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++P L VIACNTA LR+ + + F+G VPAIK A A +++ +S+L T AT+ Sbjct: 64 AGHRPDLIVIACNTASVQTLAPLRAAY-ATPFVGTVPAIKPACAQSRTKRVSVLGTKATV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI---EKEG 189 +R YT LI + C + LV S LAS E G + + I EI CF+ Sbjct: 123 QREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTSVSDAAIAAEIAPCFVGDATDPA 182 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 RTD +VLACTHYPL++ +L+PWPV W+D + +IARR LL Sbjct: 183 GRTDTVVLACTHYPLLLDRLERLAPWPVAWIDPAPAIARRVVDLL 227 >gi|86750804|ref|YP_487300.1| glutamate racemase [Rhodopseudomonas palustris HaA2] gi|86573832|gb|ABD08389.1| glutamate racemase [Rhodopseudomonas palustris HaA2] Length = 264 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 145/228 (63%), Gaps = 3/228 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL VL+++ L P+ ++YV DD FPYG + A+ R++ L +++ + Sbjct: 6 NILVFDSGLGGLTVLREVVKLRPDARYVYVGDDAFFPYGQKSEEAVIGRVVPLIGELIAE 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P L VIACNTA T+ LR+ + ++ F+G VPAIK A A +++ +S+L T T+R Sbjct: 66 HAPDLVVIACNTASTMTLAPLRARY-AVPFVGTVPAIKPACAASRTKRVSVLGTSGTVRL 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RT 192 YT LI + C ++LV S+ LA+ E G + ++ I+ EI CF+ +G RT Sbjct: 125 EYTRALIRDFAGGCDVNLVGSVHLAALAEAALGGADVPDEAIRAEIAPCFVAGDGADDRT 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 D IVLACTHYPL++ +L+PWPVDW+D + +IARR LL + H Sbjct: 185 DSIVLACTHYPLLLDRLVRLAPWPVDWIDPAPAIARRVATLLGAGSGH 232 >gi|92117194|ref|YP_576923.1| glutamate racemase [Nitrobacter hamburgensis X14] gi|91800088|gb|ABE62463.1| glutamate racemase [Nitrobacter hamburgensis X14] Length = 265 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 99/257 (38%), Positives = 150/257 (58%), Gaps = 5/257 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+ DSG+GGL VL+++ +P ++YVADD FPYG+ + + R++ L +++D Sbjct: 6 TILVLDSGLGGLTVLREIVKALPGARYVYVADDAFFPYGHHSEDEIIARVVPLVGELIDT 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y P L+VIACNT + LR+ + S+ F+G VPAIK A A +++ +S+L T AT++R Sbjct: 66 YTPDLAVIACNTMSVSVLGPLRAAY-SVPFVGTVPAIKPACAASKTKRVSVLGTRATVQR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI---EKEGKR 191 YT LI + C + LV + LA E+ G + + +I EI CF+ + R Sbjct: 125 EYTQALIRDHARACTVTLVGAAHLARLAEDALRGKPVSDADIVSEIAPCFVPAADGGALR 184 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 TD +VLACTHYPL++ +L+PWPV W+D + +IARR LL ++ R F +F Sbjct: 185 TDAVVLACTHYPLLLDRLLRLAPWPVAWIDPAPAIARRVVDLLGPGDSGG-REFPPEMIF 243 Query: 252 LSGKPDIAMRRLMQGFG 268 SG+ L FG Sbjct: 244 TSGRSRTLTDALAPFFG 260 >gi|75675509|ref|YP_317930.1| glutamate racemase [Nitrobacter winogradskyi Nb-255] gi|74420379|gb|ABA04578.1| glutamate racemase [Nitrobacter winogradskyi Nb-255] Length = 271 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 136/218 (62%), Gaps = 4/218 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+ DSG+GGL VL+++ +P +IYVADD FPYG + + R++ L +++ Sbjct: 6 TILVLDSGLGGLTVLREIVNALPAARYIYVADDAFFPYGRLSEEDIIARVVPLVGELIGA 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P + VIACNT + LR+ +P+ F+G VPAIK A A +++ +S+L T AT++R Sbjct: 66 HAPDIVVIACNTMSVSVLGPLRAAYPA-PFVGTVPAIKPACAASKTKRVSVLGTRATVQR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI---EKEGKR 191 YT LI ++ C + LV + LAS E+ G + + +I EI CF+ E G R Sbjct: 125 EYTQALIRNHAQACTVTLVGAARLASLAEDALSGKLVSDADILSEITPCFVPAGEGGGLR 184 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 TD +VLACTHYPL++ +L+PWPV W+D + +IARR Sbjct: 185 TDAVVLACTHYPLLLDRLLRLAPWPVSWIDPAPAIARR 222 >gi|85715176|ref|ZP_01046160.1| glutamate racemase [Nitrobacter sp. Nb-311A] gi|85698091|gb|EAQ35964.1| glutamate racemase [Nitrobacter sp. Nb-311A] Length = 280 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 99/257 (38%), Positives = 147/257 (57%), Gaps = 5/257 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+ DSG+GGL VL+K+ +P ++YVADD FPYG + + R++ L +++ Sbjct: 6 TILVVDSGLGGLTVLRKIVDALPAARYVYVADDAFFPYGRLSEEEIIARVVPLVGELIGA 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + P + VIACNT + LR+ + S+ F+G VPAIK A A +++ +S+L T AT++R Sbjct: 66 HAPDIVVIACNTMSVSVLGPLRAAY-SIPFVGTVPAIKPACAASKTKRVSVLGTRATVQR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK--R 191 YT LI + C + LV + LAS E+ G + + +I EI CF+ +G R Sbjct: 125 EYTQALIRDHAQACTVTLVGAASLASLAEDALRGKTVSDADILSEIAPCFVSAVDGGDLR 184 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 TD +VLACTHYPL++ +L+PWPV W+D + +IARR LL R +F Sbjct: 185 TDAVVLACTHYPLLLDRLLKLAPWPVSWIDPAPAIARRVVDLL-GSGGGGDREAPPEMIF 243 Query: 252 LSGKPDIAMRRLMQGFG 268 SG+P L FG Sbjct: 244 TSGRPHGLTDALAPFFG 260 >gi|90021260|ref|YP_527087.1| glutamate racemase [Saccharophagus degradans 2-40] gi|89950860|gb|ABD80875.1| glutamate racemase [Saccharophagus degradans 2-40] Length = 272 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 91/235 (38%), Positives = 135/235 (57%), Gaps = 2/235 (0%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG GGL + K+ L + +Y AD+ FPYG AL++R++ +++D+ Sbjct: 14 TVLVFDSGAGGLSICTKIMALRNDCAIVYAADNAYFPYGELSTSALRQRVITFMGELIDQ 73 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y P ++VIACNTA T + +LR TF + F+G VPAIK AA TQ+G I+IL+T AT+ R Sbjct: 74 YSPSIAVIACNTASTALLADLRETF-DIPFVGVVPAIKPAATATQTGTIAILATSATVTR 132 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT +LI+ + + L S+ L S E+ + I+ + F + + D Sbjct: 133 DYTRDLINEFAPNKTVILHSAQPLVSAAEQLIQNNQCPNSAIQGALSELFAKPGAEHIDT 192 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDH 248 IVLACTH+PL+ + L P + LD+ D+IARR LL NT QT+ H Sbjct: 193 IVLACTHFPLLREAIQALLPASITLLDSGDAIARRVDSLLCATNTLKQTQRISVH 247 >gi|258542160|ref|YP_003187593.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01] gi|256633238|dbj|BAH99213.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01] gi|256636297|dbj|BAI02266.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-03] gi|256639350|dbj|BAI05312.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-07] gi|256642406|dbj|BAI08361.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-22] gi|256645461|dbj|BAI11409.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-26] gi|256648514|dbj|BAI14455.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-32] gi|256651567|dbj|BAI17501.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654558|dbj|BAI20485.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-12] Length = 289 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 101/264 (38%), Positives = 146/264 (55%), Gaps = 10/264 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M+ID P L++ IL FDSGIGGL +++ ++ L P+ Y+AD FPYG +D L Sbjct: 1 MQIDG-PALSGLRH-ILAFDSGIGGLGIVRAIQALAPDICIDYLADTAIFPYGEQDDDFL 58 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ L S + + QP V+ACNTA TL + LR+ +P M F+G VP I+ AA TQ+ Sbjct: 59 IERIVSLLSQAIRRLQPQAVVVACNTASTLALEALRAAWPDMPFVGCVPPIRWAARITQT 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +I +L+T AT+RR Y S L Y +C + ++ LA E G + + I +EI Sbjct: 119 KVIGLLATRATVRRPYLSRLHALYAPECTLIAHAAPGLAGCAELAFRGQDVPDSTILQEI 178 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI--- 237 EG F+ + R D + L CTHY ++ R LSP + WLD + ++AR LL + Sbjct: 179 EGLFVHPDSNRLDAVGLGCTHYTFVLDRLRALSPPGLTWLDPAPAVARHTCNLLAHLPQK 238 Query: 238 -NTHQTRVF----DDHALFLSGKP 256 + H F DD ALF KP Sbjct: 239 AHAHPCAWFTALPDDQALFTHLKP 262 >gi|260752377|ref|YP_003225270.1| glutamate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551740|gb|ACV74686.1| glutamate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 276 Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 85/222 (38%), Positives = 128/222 (57%), Gaps = 1/222 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L + Sbjct: 1 MSHPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R+ Y +L + S C + S L + E G K ++E++ + EG R Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYREELDRLLQQPEGDR 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYL 221 >gi|329113332|ref|ZP_08242113.1| Glutamate racemase [Acetobacter pomorum DM001] gi|326697157|gb|EGE48817.1| Glutamate racemase [Acetobacter pomorum DM001] Length = 304 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 127/219 (57%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL FDSGIGGL +++ ++ L P Y+AD FPYG +D L +R++ L S + + Sbjct: 34 ILAFDSGIGGLGIVRAIQALAPNVCIDYLADTAIFPYGEQDDDFLIERIVSLLSQAIRRL 93 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 QP V+ACNTA TL + LR+ +P M F+G VP I+ AA TQ+ +I +L+T AT+RR Sbjct: 94 QPQAVVVACNTASTLALEALRAAWPDMPFVGCVPPIRWAARITQTKVIGLLATRATVRRP 153 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y S L Y +C + ++ LA E G + + I +EIEG F+ + R D + Sbjct: 154 YLSRLHALYAPECTLIAHAAPGLAGCAELAFRGQDVPDSTILREIEGLFVHPDSNRLDAV 213 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 L CTHY +++ R LSP + WLD + ++AR LL Sbjct: 214 GLGCTHYTFVLNRLRALSPPGLTWLDPAPAVARHTCNLL 252 >gi|56552093|ref|YP_162932.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543667|gb|AAV89821.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4] Length = 276 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 85/222 (38%), Positives = 126/222 (56%), Gaps = 1/222 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L + Sbjct: 1 MSRPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R+ Y +L + S C + S L + E G K + E++ + EG R Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDR 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYL 221 >gi|54310515|ref|YP_131535.1| glutamate racemase [Photobacterium profundum SS9] gi|46914958|emb|CAG21733.1| putative glutamate racemase [Photobacterium profundum SS9] Length = 262 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 129/220 (58%), Gaps = 6/220 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++LIFDSG+GGL V Q+++ L+P+ +IY D+ FPYG E+ L +R + + ++ Sbjct: 3 TVLIFDSGVGGLSVYQELQALIPQVQYIYAFDNAAFPYGELEEDVLLQRTQHIVCSLAEQ 62 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + L VIACNTA T++ LR + S+ +G VPAIK AA +Q+ +I +L+TPAT+ R Sbjct: 63 HNVDLVVIACNTASTIVLPTLRESL-SIPVVGVVPAIKPAATLSQTKVIGLLATPATIHR 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT LI S+ S C + ++ S L EE G+ + DEI + I+ K D Sbjct: 122 SYTHELISSFASDCEVRMIGSTRLVEIAEEKLRGLPVSIDEIAE-----IIKPWQKDVDC 176 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 I+L CTH+PLI RQ + +D+ +IA R + LL Sbjct: 177 IILGCTHFPLIKDEIRQALDKAIVIVDSGKAIANRVKDLL 216 >gi|304398949|ref|ZP_07380818.1| glutamate racemase [Pantoea sp. aB] gi|304353409|gb|EFM17787.1| glutamate racemase [Pantoea sp. aB] Length = 283 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 87/251 (34%), Positives = 142/251 (56%), Gaps = 12/251 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + I Sbjct: 20 LRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKSETFIVERVVAIVEAI 79 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +Y L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T AT Sbjct: 80 TQRYPLSLVIIACNTASTVSLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATRAT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +RR YT L+ + C+I ++ S L E G ++ DE+++ ++ + + Sbjct: 139 VRRPYTHELVAQFAGSCNIEMLGSAELVELAEAKLHGAEVALDEVRRIVQPWL--RMAEP 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL----PRINTHQTRV--- 244 D +VL CTH+PL+ +Q+ P +D+ +IARR LL P +N+ Q V Sbjct: 197 PDTVVLGCTHFPLLREELQQVLPEGTRLIDSGAAIARRTAWLLEHEAPEVNSSQQNVAFC 256 Query: 245 --FDDHALFLS 253 D A+ LS Sbjct: 257 TALDGEAVQLS 267 >gi|241762044|ref|ZP_04760128.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373510|gb|EER63097.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 276 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 84/222 (37%), Positives = 126/222 (56%), Gaps = 1/222 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L + Sbjct: 1 MSRPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R+ Y +L + S C + S L + E G K + E++ + EG + Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDQ 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYL 221 >gi|90414704|ref|ZP_01222675.1| glutamate racemase [Photobacterium profundum 3TCK] gi|90324246|gb|EAS40821.1| glutamate racemase [Photobacterium profundum 3TCK] Length = 263 Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 127/220 (57%), Gaps = 6/220 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +ILIFDSG+GGL V Q+++ LMP+ +IY D+ FPYG + L +R + + +K Sbjct: 4 TILIFDSGVGGLSVYQEIQSLMPQIQYIYAFDNAAFPYGELAEDVLLQRTQRIVCSLAEK 63 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + L VIACNTA T++ LR S+ +G VPAIK AA +Q+ +I +L+TPAT+ R Sbjct: 64 HNVDLVVIACNTASTIVLPILRENL-SVPVVGVVPAIKPAAILSQTKVIGLLATPATIHR 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT LI S+ S C + ++ S L EE G+ + DEI + I+ K D Sbjct: 123 SYTHELISSFASDCEVRMIGSTRLVEIAEEKLRGLPVSIDEIAE-----IIKPWQKDVDC 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 I+L CTH+PLI RQ + +D+ +IA R + LL Sbjct: 178 IILGCTHFPLIKDEIRQALDKAIVIVDSGKAIANRVKGLL 217 >gi|114799484|ref|YP_761669.1| glutamate racemase [Hyphomonas neptunium ATCC 15444] gi|114739658|gb|ABI77783.1| glutamate racemase [Hyphomonas neptunium ATCC 15444] Length = 290 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 87/234 (37%), Positives = 128/234 (54%), Gaps = 2/234 (0%) Query: 6 YPCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 +P E + +L+FDSG+GGL V ++R L P Y AD FPYG+ D AL+ RL Sbjct: 7 FPFEPSPARGRVLVFDSGVGGLTVAAEIRALGPRLSVHYAADTGFFPYGDKSDEALRARL 66 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + +++ +P + VIACNTA TL E+R+ + +G VPAIK AA T++G I Sbjct: 67 PVVAKALVEAVRPDVFVIACNTASTLALPEVRAVL-DIPVVGTVPAIKPAAKLTETGTIG 125 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+TP T+RR YT+ LI + S + L S+ L E +A G + + F Sbjct: 126 LLATPGTIRRAYTARLIEEFASGKRVILHGSLDLVKLAEAHARGEDVPPEAFAAAQAPLF 185 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 G + D IVLACTH+PL+ +P V ++D+ +IAR+ +LP N Sbjct: 186 TAPGGDQIDTIVLACTHFPLVRGQLIATAPHAVSYIDSGAAIARQTIRVLPARN 239 >gi|308188582|ref|YP_003932713.1| glutamate racemase [Pantoea vagans C9-1] gi|308059092|gb|ADO11264.1| Glutamate racemase [Pantoea vagans C9-1] Length = 283 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 87/251 (34%), Positives = 143/251 (56%), Gaps = 12/251 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + I Sbjct: 20 LRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKSETFIVERVVAIVEAI 79 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +Y L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T AT Sbjct: 80 TQRYPLSLVIIACNTASTVSLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATRAT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +RR YT L+ + C+I ++ S L E G ++ DE+++ ++ + + Sbjct: 139 VRRPYTHELVSQFAGSCNIEMLGSAELVELAEAKLHGAEVALDEVRRIVQPWL--RMAEP 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL----PRINTHQTRV--- 244 D +VL CTH+PL+ +Q+ P +D+ +IARR LL P+I++ Q V Sbjct: 197 PDTVVLGCTHFPLLREELQQVLPEGTRLIDSGAAIARRTVWLLEHEAPQIHSSQQNVAFC 256 Query: 245 --FDDHALFLS 253 D A+ LS Sbjct: 257 TELDGEAVQLS 267 >gi|330994654|ref|ZP_08318577.1| Glutamate racemase [Gluconacetobacter sp. SXCC-1] gi|329758295|gb|EGG74816.1| Glutamate racemase [Gluconacetobacter sp. SXCC-1] Length = 279 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 1/215 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL FDSGIGGL V+ ++R L+P Y+AD +PYG D L+ R++ L + + Sbjct: 4 ILAFDSGIGGLGVVAQLRALLPGVPIDYLADTAVYPYGEQPDALLRHRIVTLLGQAIARL 63 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P + VIACNTA TL D LR+T+ + F+G VP IK AA +T++G I +L+T AT+RR Sbjct: 64 RPSVVVIACNTASTLALDSLRATY-GIPFVGCVPPIKWAADHTRTGTIGLLATRATVRRP 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y +L + +C + + LA E G+ ++ E++G F + G DV+ Sbjct: 123 YLQDLHARFAPRCTLLAHGARGLADMAERAFRGLPPDRTQLAIELDGLFGQPGGAAIDVV 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + CTHY ++ R+ P V WLD + ++AR+A Sbjct: 183 GIGCTHYTFLLDALRESGPAGVTWLDPAPAVARQA 217 >gi|262273148|ref|ZP_06050964.1| glutamate racemase [Grimontia hollisae CIP 101886] gi|262222726|gb|EEY74035.1| glutamate racemase [Grimontia hollisae CIP 101886] Length = 263 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 92/243 (37%), Positives = 131/243 (53%), Gaps = 6/243 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 S+LIFDSG+GGL V +++ L+PE H +Y D+ FPYG D L +R+ + + + Sbjct: 2 KSVLIFDSGVGGLSVYKEIAQLLPEQHIVYAFDNAAFPYGELADDILIQRVCGMVASLCH 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA TL+ LRS S+ +G VPAIK AAA +++ I +L+TPAT+ Sbjct: 62 ELDIALVVIACNTASTLVLPHLRSLL-SIPVVGVVPAIKPAAAMSKTKHIGLLATPATVN 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 RTYT L+ + CH+ +V S L E GI + + +I K++ FI K TD Sbjct: 121 RTYTKQLVEEFAPDCHVEMVGSTELVQMGEGKLRGIPV-DKKILKQVLMPFINK----TD 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTH+PL+ ++ +D+ +IA R LL T D L S Sbjct: 176 CIVLGCTHFPLLRDEIEEILGDQCLVIDSGKAIANRVDTLLKERGALSTSFRDKKHLAFS 235 Query: 254 GKP 256 P Sbjct: 236 SAP 238 >gi|157373001|ref|YP_001480990.1| glutamate racemase [Serratia proteamaculans 568] gi|167017321|sp|A8GL72|MURI_SERP5 RecName: Full=Glutamate racemase gi|157324765|gb|ABV43862.1| glutamate racemase [Serratia proteamaculans 568] Length = 287 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 89/262 (33%), Positives = 144/262 (54%), Gaps = 4/262 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + ++L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S Sbjct: 23 KTRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIVSA 82 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + ++ + +IACNTA T+ LR F + +G VPAIK AA T +G++ +L+T Sbjct: 83 VQQRHPLAIVIIACNTASTVSLPALRERF-TFPVVGVVPAIKPAARLTANGVVGLLATRG 141 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++RTYT LI + + C I L+ S L E G + +KK + +E Sbjct: 142 TVQRTYTHELIARFATDCKIELLGSSELVELAEAKLHGEAVPLPTLKKILHPWLSMREPP 201 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTH+PL+ Q+ P +D+ +IARR L+ + D+ A Sbjct: 202 --DTVVLGCTHFPLLAEELMQVLPEGTRLIDSGAAIARRTAWLISTQENLVSTQEDNLAY 259 Query: 251 FLSGKPDI-AMRRLMQGFGLKS 271 ++ D A+ ++QG+G KS Sbjct: 260 CMALNEDTDALLPVLQGYGFKS 281 >gi|119773335|ref|YP_926075.1| glutamate racemase [Shewanella amazonensis SB2B] gi|119765835|gb|ABL98405.1| glutamate racemase [Shewanella amazonensis SB2B] Length = 266 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 85/233 (36%), Positives = 128/233 (54%), Gaps = 5/233 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E L IL+FDSGIGGL VL ++R L+P F Y+ D+ PYG + L + L Sbjct: 2 EFGLARPILVFDSGIGGLSVLSEIRQLLPSNDFYYLFDNARLPYGELTEQVLVDGCVELV 61 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 K L VIACNTA TL+ LRS ++ +G VPAIK AA++T SG I +L+T Sbjct: 62 VSAATKINAALVVIACNTASTLVLPVLRSKL-TIPVVGVVPAIKPAASHTLSGHIGLLAT 120 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 PAT++R+YT L+ + S C +H+ S L E+ G+ + +++ G + Sbjct: 121 PATVKRSYTHELVTKFASDCQVHMFGSSELVMMAEQKMAGVPVDMEKLT----GILAPIQ 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + DV+VL CTH+P++ + Q+ + LD+ +IA R + +L + HQ Sbjct: 177 ATQVDVLVLGCTHFPMLAYELSQILGPGIKLLDSGFAIASRVQHVLEGLGEHQ 229 >gi|254785730|ref|YP_003073159.1| glutamate racemase [Teredinibacter turnerae T7901] gi|237683438|gb|ACR10702.1| glutamate racemase [Teredinibacter turnerae T7901] Length = 283 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 1/224 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+ DSG GGL V +++ P+ Y AD GFPYG D L +RL+ L + L + Sbjct: 14 ILVLDSGAGGLTVAREILHRNPDVSMDYFADIAGFPYGTMPDDVLIRRLVSLVGNCLSQR 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 QP + V+ACNTA TL LR+ +P++ F+G VPAIK AA+ T++G+I +L+TPAT+ R Sbjct: 74 QPDIVVLACNTASTLALRALRARYPTVEFVGVVPAIKPAASITRTGVIGLLATPATVNRD 133 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + S L E+ G K + +E+ + D I Sbjct: 134 YTRQLIEDFAGNHEVVTHGSNPLVVCAEQLLQGTKPDTGILIEELGKLRTKSTAGSVDTI 193 Query: 196 VLACTHYPLIVHVFRQL-SPWPVDWLDNSDSIARRARCLLPRIN 238 VLACTH+PL++ F+ L S + W+D+ +IA R LL ++ Sbjct: 194 VLACTHFPLLLPYFKALPSCESISWVDSGSAIANRVHHLLQKLG 237 >gi|270265151|ref|ZP_06193413.1| glutamate racemase [Serratia odorifera 4Rx13] gi|270040785|gb|EFA13887.1| glutamate racemase [Serratia odorifera 4Rx13] Length = 260 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 89/257 (34%), Positives = 141/257 (54%), Gaps = 4/257 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S + ++ Sbjct: 1 MLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIVSAVQQRH 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++RT Sbjct: 61 PLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAARLTANGVVGLLATRGTVQRT 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + C I L+ S L E G + +KK + +E D + Sbjct: 120 YTHELIARFATDCKIELLGSSELVELAEAKLHGEAVPLATLKKILHPWLSMREPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PL+ Q+ P +D+ +IARR L+ + D+ A ++ Sbjct: 178 VLGCTHFPLLAEELMQVLPEGTRLVDSGAAIARRTAWLISSQENLVSTQEDNLAYCMALN 237 Query: 256 PDI-AMRRLMQGFGLKS 271 D A+ ++QG+G KS Sbjct: 238 EDTDALLPVLQGYGFKS 254 >gi|291619386|ref|YP_003522128.1| MurI [Pantoea ananatis LMG 20103] gi|291154416|gb|ADD79000.1| MurI [Pantoea ananatis LMG 20103] Length = 283 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 131/223 (58%), Gaps = 3/223 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + I Sbjct: 20 LRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKTETFIVERVVAIVDAI 79 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T AT Sbjct: 80 TRRHPISLVIIACNTASTVTLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATRAT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +RR+YT L+ + C I ++ S L E G ++ DEI++ ++ + + Sbjct: 139 VRRSYTHELVSQFAKTCKIEMLGSAELVELAEAKLHGEEVSIDEIRRIVQPWL--RMAEP 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+PL+ +Q+ P +D+ +IARR LL Sbjct: 197 PDTVVLGCTHFPLLRDELQQILPEGTRLIDSGAAIARRTAWLL 239 >gi|327395709|dbj|BAK13131.1| glutamate racemase MurI [Pantoea ananatis AJ13355] Length = 241 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 131/223 (58%), Gaps = 3/223 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + I Sbjct: 20 LRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKTETFIVERVVAIVDAI 79 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T AT Sbjct: 80 TRRHPISLVIIACNTASTVTLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATRAT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +RR+YT L+ + C I ++ S L E G ++ DEI++ ++ + + Sbjct: 139 VRRSYTHELVSQFAKTCKIEMLGSAELVELAEAKLHGEEVSIDEIRRIVQPWL--RMAEP 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+PL+ +Q+ P +D+ +IARR LL Sbjct: 197 PDTVVLGCTHFPLLRDELQQILPEGTRLIDSGAAIARRTAWLL 239 >gi|192359030|ref|YP_001982653.1| glutamate racemase [Cellvibrio japonicus Ueda107] gi|190685195|gb|ACE82873.1| glutamate racemase [Cellvibrio japonicus Ueda107] Length = 279 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 128/220 (58%), Gaps = 3/220 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL V Q+++ +P IY +D+ FPYG E+ L R+ + + +L Y Sbjct: 16 ILVFDSGVGGLSVAQEIQASLPGVALIYASDNAAFPYGTKEEGELIARVERVMAALLASY 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA TL LR F ++ F+G VPAIK AA +QSG+I +L+TPAT+ R Sbjct: 76 PVDLVVVACNTASTLTLPHLRQRF-NLPFVGVVPAIKPAAESSQSGVIGLLATPATVARP 134 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DV 194 YT +LI ++ S C + + S L E+ G I + I I ++ +G R D Sbjct: 135 YTHDLITTHASDCTVISLGSSELVLLAEQKLRGETITDKAIAP-ITQALLDADGSRQMDR 193 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VLACTH+PL+ + P + +D+ +IARR + LL Sbjct: 194 LVLACTHFPLLREELGRNLPQRIQLIDSGAAIARRVKHLL 233 >gi|37528551|ref|NP_931896.1| glutamate racemase [Photorhabdus luminescens subsp. laumondii TTO1] gi|81572235|sp|Q7MYE4|MURI_PHOLL RecName: Full=Glutamate racemase gi|36787989|emb|CAE17106.1| glutamate racemase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 287 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 4/260 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + ++L+FDSG+GGL + Q++R L+P+ H+IYV D+ FPYG + + +R++ + Sbjct: 22 KAARPTVLVFDSGVGGLSIYQEIRQLLPDLHYIYVFDNEAFPYGEKSEEFIVERVVQIVG 81 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 I K+ + VIACNTA T+ LR F S +G VPAIK AA T++G++ +L+T Sbjct: 82 AIQQKHPLTIVVIACNTASTVSLPALRERF-SFPVVGVVPAIKPAAKLTRNGVVGLLATR 140 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ R+YT LI + + C I + S L E G K+ D +KK ++ K Sbjct: 141 ATVNRSYTKELIEKFATGCRIESIGSAELVELAEIKLHGGKVSPDILKKILKPWLGMK-- 198 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 K D +VL CTH+PL+ Q+ P +D+ +IARR L+ N D A Sbjct: 199 KPPDTVVLGCTHFPLLAEELVQILPDGTRLIDSGVAIARRTAWLVKHQNNLVCTSADSLA 258 Query: 250 LFLSGKPDI-AMRRLMQGFG 268 + D A+ ++Q +G Sbjct: 259 YCMKVNTDTDALIPVLQEYG 278 >gi|293393497|ref|ZP_06637807.1| glutamate racemase [Serratia odorifera DSM 4582] gi|291423832|gb|EFE97051.1| glutamate racemase [Serratia odorifera DSM 4582] Length = 260 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 143/257 (55%), Gaps = 4/257 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + + +Y Sbjct: 1 MLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEQFIVERVLEIVGAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + +IACNTA T+ LR+ F S +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLAIVIIACNTASTVSLPALRARF-SFPVVGVVPAIKPAAKLTANGIVGLLATRGTVQRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + C I L+ S L E G ++ +KK ++ +E D + Sbjct: 120 YTHELIARFATDCKIELLGSSELVELAEAKLHGEEVPLAALKKILQPWLSMREPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PL+ Q+ P +D+ +IARRA L+ ++ ++ A ++ Sbjct: 178 VLGCTHFPLLADELMQVLPQGTRLVDSGAAIARRAAWLISSQENLRSSQEENVAYCMALN 237 Query: 256 PDI-AMRRLMQGFGLKS 271 D A+ ++Q +G S Sbjct: 238 DDTDALLPVLQSYGFNS 254 >gi|292486642|ref|YP_003529512.1| glutamate racemase [Erwinia amylovora CFBP1430] gi|292897879|ref|YP_003537248.1| glutamate racemase [Erwinia amylovora ATCC 49946] gi|291197727|emb|CBJ44822.1| glutamate racemase [Erwinia amylovora ATCC 49946] gi|291552059|emb|CBA19096.1| Glutamate racemase [Erwinia amylovora CFBP1430] gi|312170706|emb|CBX78969.1| Glutamate racemase [Erwinia amylovora ATCC BAA-2158] Length = 283 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 143/258 (55%), Gaps = 4/258 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + + + + Sbjct: 23 TVLIFDSGVGGLSVYSEIRALLPDLHYLYAFDNVAFPYGEKSEEFIVERVLAIVTAVTRR 82 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T++R Sbjct: 83 YPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGTVKR 141 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT L+ + +C ++ S L E G + +E+++ ++ + + D Sbjct: 142 PYTHELVARFAGECRTEMLGSGELVELAEAKLHGQPVAIEEVRRILQPWL--RMSEPPDT 199 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL L Sbjct: 200 VVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPVAVSTDDNMALCLDN 259 Query: 255 KPD-IAMRRLMQGFGLKS 271 + + ++Q +G K+ Sbjct: 260 TEQAVQLIPVLQRYGFKT 277 >gi|304312822|ref|YP_003812420.1| Glutamate racemase [gamma proteobacterium HdN1] gi|301798555|emb|CBL46785.1| Glutamate racemase [gamma proteobacterium HdN1] Length = 276 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 S+++FDSGIGGL V +++R MP YVAD+ FPYG ++ L +R+ L + + Sbjct: 10 SVILFDSGIGGLSVAREIRAAMPGLDINYVADNRIFPYGLQKESVLIERVCALMPILEAR 69 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y P VIACN+A T++ D LR T + +G VPAIK AAA +Q +I +L+TP T++R Sbjct: 70 YSPGAIVIACNSASTVVLDALR-TQTQVPVIGVVPAIKPAAAQSQRRVIGLLATPGTIQR 128 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT LI + + C + LV S L S E GI I E+ I F E D+ Sbjct: 129 SYTRRLIDQFANDCTVLLVGSSALVSLAENKLRGIPIDLQEVSN-IVAPFCHAETP-PDI 186 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+P + Q+ P +D+ ++IARR R +L Sbjct: 187 VVLGCTHFPFLREELMQVLPENTRLIDSGEAIARRTRHIL 226 >gi|126667191|ref|ZP_01738165.1| glutamate racemase [Marinobacter sp. ELB17] gi|126628347|gb|EAZ98970.1| glutamate racemase [Marinobacter sp. ELB17] Length = 280 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 90/267 (33%), Positives = 134/267 (50%), Gaps = 18/267 (6%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 S+L+FDSG+GGL V +R P +Y+AD+ GFPYG+ + + +R L + L + Sbjct: 8 SVLVFDSGVGGLSVAASIRRRCPHLPLVYLADNAGFPYGDKPEEEVTRRTCNLVTSALSQ 67 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + V+ACNTA T+ LR S A +G VPAIK AAA + + I IL+TPAT+ R Sbjct: 68 FDCQIVVLACNTASTVALPALRQCV-SEAVVGVVPAIKPAAAISVNRRIGILATPATVAR 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +Y LI Y + C + + L E A G + + + + + E D Sbjct: 127 SYLDQLIADYAADCQVSRIGHPSLVHWAEGLARGEPVPQSRLAE----ILVPFELAGVDT 182 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD------- 247 +VL CTHYPL++ +Q +P W+D+ D+IARR LL + + Q + Sbjct: 183 VVLGCTHYPLLLPALKQAAPGVRFWVDSGDAIARRVEQLLAFLKSAQPQALTSRLQPGMP 242 Query: 248 -----HALFLSGKPDIAMRRLMQGFGL 269 ALF + P + M G GL Sbjct: 243 PKPLQQALFSASAPP-GIECFMTGLGL 268 >gi|119476761|ref|ZP_01617071.1| glutamate racemase [marine gamma proteobacterium HTCC2143] gi|119450017|gb|EAW31253.1| glutamate racemase [marine gamma proteobacterium HTCC2143] Length = 280 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 124/219 (56%), Gaps = 1/219 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL ++Q +R +P Y+AD++ FPYG +D L R + S + Y Sbjct: 19 ILVFDSGVGGLSIVQHIRLHVPHATITYLADNLFFPYGVLDDQTLLSRTCEIVSWAHNHY 78 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 QP L V+ACN+A TL+ LR+ + +G VPAIK AAA + + +I +L+TPAT++R Sbjct: 79 QPSLIVLACNSASTLVLPHLRAIL-GVPVVGVVPAIKPAAAMSTTNVIGLLATPATIQRD 137 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + C + V S L VE G+K E+EIK + D + Sbjct: 138 YTDELIAEFAPHCEVIKVGSAALVDFVERKMAGLKPTENEIKHILSLFNQHPRWSSVDTV 197 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VLACTH+PL+ +P W+D+ D++ARR LL Sbjct: 198 VLACTHFPLVKRELSDAAPSIKHWVDSGDAVARRVTSLL 236 >gi|330444840|ref|ZP_08308495.1| glutamate racemase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489150|dbj|GAA02992.1| glutamate racemase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 269 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 126/219 (57%), Gaps = 6/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D L +R ++ S ++++Y Sbjct: 7 IVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELPDDVLIERTNYIVSTLVEQY 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q L VIACNTA T++ LR ++ +G VPAIK AA +Q+ +I +L+TPAT++R+ Sbjct: 67 QADLVVIACNTASTIVLPTLRKHL-TVPVVGVVPAIKPAAKLSQTKVIGLLATPATVKRS 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + S C + ++ S L E+ G I DE+ + ++ D I Sbjct: 126 YTQQLISQFASDCEVKMIGSTRLVEMAEQKLRGEAISLDELSD-----ILAPWQQQVDSI 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +L CTH+PLI + + V +D+ +IA R LL Sbjct: 181 ILGCTHFPLIKDEIQAVLNNDVYIVDSGKAIANRVASLL 219 >gi|89074505|ref|ZP_01160982.1| glutamate racemase [Photobacterium sp. SKA34] gi|89049793|gb|EAR55343.1| glutamate racemase [Photobacterium sp. SKA34] Length = 270 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 126/219 (57%), Gaps = 6/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D+ L +R + S ++++Y Sbjct: 7 IVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELPDNVLIERTNHIVSTLVEQY 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q L VIACNTA T++ LR ++ +G VPAIK AA +Q+ +I +L+TPAT++R Sbjct: 67 QADLVVIACNTASTIVLPTLRQNL-NIPIVGVVPAIKPAAKLSQTKVIGLLATPATVKRE 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI+ + S C + ++ S L E+ G I E+ + + ++ D I Sbjct: 126 YTQQLINQFASDCEVKMIGSTRLVEMAEQKLRGEAISLHELSE-----ILAPWQQQVDSI 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +L CTH+PLI + + V +D+ +IA R LL Sbjct: 181 ILGCTHFPLIKEEIKAVLNNEVSIVDSGKAIAVRVSSLL 219 >gi|188532303|ref|YP_001906100.1| glutamate racemase [Erwinia tasmaniensis Et1/99] gi|229486272|sp|B2VGA6|MURI_ERWT9 RecName: Full=Glutamate racemase gi|188027345|emb|CAO95190.1| Glutamate racemase [Erwinia tasmaniensis Et1/99] Length = 283 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 83/261 (31%), Positives = 145/261 (55%), Gaps = 4/261 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + + + Sbjct: 20 LRPTVLIFDSGVGGLSVYNEIRTLLPDLHYLYAFDNVAFPYGEKSEAFIVERVLDIVTAV 79 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T Sbjct: 80 TGLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT L+ + +C ++ S L E G + +E+++ ++ + + Sbjct: 139 VKRPYTHELVARFAGECKTEMLGSGELVDIAEAKLHGQPVAIEEVRRILQPWL--RMAEP 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL Sbjct: 197 PDTVVLGCTHFPLISEELQQVLPQGTRLIDSGAAIARRTVWLLENESPEVLSADDNMALC 256 Query: 252 LS-GKPDIAMRRLMQGFGLKS 271 L + + + ++Q +G K+ Sbjct: 257 LEITEQTVQLIPVLQRYGFKT 277 >gi|253991699|ref|YP_003043055.1| glutamate racemase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783149|emb|CAQ86314.1| glutamate racemase [Photorhabdus asymbiotica] Length = 268 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 88/260 (33%), Positives = 141/260 (54%), Gaps = 4/260 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K ++ ++L+FDSG+GGL V Q++R L+P+ H+IYV D+ FPYG + + +R++ + S Sbjct: 3 KTVRPTVLVFDSGVGGLSVYQEIRQLLPDLHYIYVFDNEAFPYGEKSEEFIIERVVEIVS 62 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + K+ + VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T Sbjct: 63 AVQQKHPLAIVVIACNTASTVSLPALRERF-HFSVVGVVPAIKPAAKLTCNGIVGLLATR 121 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ R+YT LI + + C I + S L E G K+ + +K+ ++ KE Sbjct: 122 ATVNRSYTKELIERFAADCRIESIGSAELVELAEAKLHGNKVSSEALKQILKPWLKMKEP 181 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D +VL CTH+PL+ Q+ P +D+ +IARR L+ D A Sbjct: 182 P--DTVVLGCTHFPLLAEELIQVLPDGTRLIDSGAAIARRTAWLVKHQENLVCTSIDSLA 239 Query: 250 LFLSGKPDI-AMRRLMQGFG 268 + D A+ ++Q +G Sbjct: 240 YCMKMNVDTDALIPVLQAYG 259 >gi|296116308|ref|ZP_06834924.1| glutamate racemase [Gluconacetobacter hansenii ATCC 23769] gi|295977127|gb|EFG83889.1| glutamate racemase [Gluconacetobacter hansenii ATCC 23769] Length = 278 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 86/224 (38%), Positives = 124/224 (55%), Gaps = 1/224 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL FDSGIGGL +++ +R +P Y+AD FPYG D L R++ L + + Sbjct: 3 ILAFDSGIGGLGIVRCLRTDLPGARIDYLADTAVFPYGEQADDFLVTRILTLVGQAIARL 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P L VIACNTA TL D LR+ + F+G VP IK AA TQSG I +L+T ATL R Sbjct: 63 RPDLVVIACNTASTLALDALRARH-RLPFVGCVPPIKWAADLTQSGTIGLLATRATLTRP 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y SNL + + C + + LA E G + E I+ E++G F + G DV+ Sbjct: 122 YLSNLRNRFAPGCTLITYGARNLADLSELAFRGRPVPERAIRMEMDGLFSQPGGDAIDVV 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 L CTHY ++ F++L + W+D + +++R+A L + T Sbjct: 182 GLGCTHYTFLLDRFQRLGRPGLRWIDPAQAVSRQATRLAHNLGT 225 >gi|16767395|ref|NP_463010.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|207859320|ref|YP_002245971.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|17865743|sp|P40723|MURI_SALTY RecName: Full=Glutamate racemase gi|226707589|sp|B5QXR2|MURI_SALEP RecName: Full=Glutamate racemase gi|16422698|gb|AAL22969.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|206711123|emb|CAR35497.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|267996437|gb|ACY91322.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160637|emb|CBW20168.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|320088535|emb|CBY98294.1| Glutamate racemase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|323132476|gb|ADX19906.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326625851|gb|EGE32196.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332990959|gb|AEF09942.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 283 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 82/238 (34%), Positives = 135/238 (56%), Gaps = 7/238 (2%) Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56 ++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64 Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA Sbjct: 65 ETFIVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+ Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 184 RRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|238892365|ref|YP_002917099.1| glutamate racemase [Klebsiella pneumoniae NTUH-K2044] gi|238544681|dbj|BAH61032.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 283 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 80/234 (34%), Positives = 131/234 (55%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + ++L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQQRYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ + Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +E D +VL CTH+PL+ +++ P +D+ +IARR LL Sbjct: 188 RPWLRMQEPP--DTVVLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLL 239 >gi|56415968|ref|YP_153043.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62182590|ref|YP_219007.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161486778|ref|NP_807142.2| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161501913|ref|NP_457929.2| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|197364895|ref|YP_002144532.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|22001825|sp|Q8Z315|MURI_SALTI RecName: Full=Glutamate racemase gi|75479264|sp|Q57H86|MURI_SALCH RecName: Full=Glutamate racemase gi|81599685|sp|Q5PK79|MURI_SALPA RecName: Full=Glutamate racemase gi|229486290|sp|B5BJP1|MURI_SALPK RecName: Full=Glutamate racemase gi|56130225|gb|AAV79731.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62130223|gb|AAX67926.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197096372|emb|CAR61977.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|322717091|gb|EFZ08662.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 283 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 82/238 (34%), Positives = 135/238 (56%), Gaps = 7/238 (2%) Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56 ++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64 Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA Sbjct: 65 ETFIVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+ Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 184 RRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|310766063|gb|ADP11013.1| glutamate racemase [Erwinia sp. Ejp617] Length = 283 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 84/260 (32%), Positives = 143/260 (55%), Gaps = 4/260 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + + + Sbjct: 20 LRPTVLIFDSGVGGLSVYNEIRALLPDLHYLYAFDNVAFPYGEKSEEFIVERVVAIVTAV 79 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T Sbjct: 80 TRLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + +C ++ S L E G + +E+++ ++ E Sbjct: 139 VKRPYTHELIARFAGECKTEMLGSGELVEIAEAKLHGQPVALEEVRRILQPWLRMPEPP- 197 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL Sbjct: 198 -DTVVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPEALSADDNMALC 256 Query: 252 LS-GKPDIAMRRLMQGFGLK 270 + + + + ++Q +G K Sbjct: 257 MGITEQAVQLIPVLQRYGFK 276 >gi|206577595|ref|YP_002241172.1| glutamate racemase [Klebsiella pneumoniae 342] gi|288937809|ref|YP_003441868.1| glutamate racemase [Klebsiella variicola At-22] gi|290513035|ref|ZP_06552398.1| glutamate racemase [Klebsiella sp. 1_1_55] gi|226707588|sp|B5XZ09|MURI_KLEP3 RecName: Full=Glutamate racemase gi|206566653|gb|ACI08429.1| glutamate racemase [Klebsiella pneumoniae 342] gi|288892518|gb|ADC60836.1| glutamate racemase [Klebsiella variicola At-22] gi|289774417|gb|EFD82422.1| glutamate racemase [Klebsiella sp. 1_1_55] Length = 283 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 80/234 (34%), Positives = 131/234 (55%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + ++L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQQRYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ + Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +E D +VL CTH+PL+ +++ P +D+ +IARR LL Sbjct: 188 RPWLRMQEPP--DTVVLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLL 239 >gi|205354293|ref|YP_002228094.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|226707590|sp|B5REZ1|MURI_SALG2 RecName: Full=Glutamate racemase gi|205274074|emb|CAR39081.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629417|gb|EGE35760.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 283 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 82/238 (34%), Positives = 135/238 (56%), Gaps = 7/238 (2%) Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56 ++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64 Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA Sbjct: 65 ETFIVERVVEIATAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+ Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 184 RRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|294011705|ref|YP_003545165.1| glutamate racemase [Sphingobium japonicum UT26S] gi|292675035|dbj|BAI96553.1| glutamate racemase [Sphingobium japonicum UT26S] Length = 267 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 115/217 (52%), Gaps = 1/217 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +L FDSG+GGL +L + +P +Y AD GFPYG + + R+ L ++ Sbjct: 6 QAPLLFFDSGVGGLSILAPAQAALPHAPVVYAADSAGFPYGTRSEAEIAARVPALLGRLV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++Y+P L+VIACNTA T+ +R+ + +G VPAIK AA +QS + +L T AT+ Sbjct: 66 ERYRPRLAVIACNTASTIALSAVRAAL-DIPVVGTVPAIKPAALLSQSRVFGVLGTDATV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R+ Y L + S C + S L E G + + + G F + G R Sbjct: 125 RQPYVDRLAAEHGSDCTVLRHGSAALVQLAEAKLRGEPLDPAVARDALAGLFDQPGGDRM 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D++VLACTH+PL+ SP P+ ++ + IARR Sbjct: 185 DIVVLACTHFPLVEAELAAASPRPLRFVHGGEGIARR 221 >gi|330861644|emb|CBX71822.1| glutamate racemase [Yersinia enterocolitica W22703] Length = 287 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/275 (32%), Positives = 147/275 (53%), Gaps = 17/275 (6%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 K D P + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + Sbjct: 19 KADTAP-----RPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIV 73 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +R++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G Sbjct: 74 ERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNG 132 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++ +L+T T+ +YT +LI + + C I L+ S L E G + ++ +KK + Sbjct: 133 VVGLLATRGTVHASYTQDLIERFATDCKIELLGSSELVELAETKLHGGVVPKEALKKILH 192 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +E D IVL CTH+PL+ Q+ P +D+ +IARR L I++ + Sbjct: 193 PWLAMREPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWL---ISSQE 247 Query: 242 TRVFDD-----HALFLSGKPDIAMRRLMQGFGLKS 271 + D + + L+ D A+ ++QG+G S Sbjct: 248 NMISSDEENIAYCMALNADTD-ALLPVLQGYGFPS 281 >gi|332185464|ref|ZP_08387212.1| glutamate racemase [Sphingomonas sp. S17] gi|332014442|gb|EGI56499.1| glutamate racemase [Sphingomonas sp. S17] Length = 286 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 1/214 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL FDSG+GGL + R +P F+YVAD GFPYG + + R+ L + ++Y Sbjct: 28 ILFFDSGVGGLSIAGPARMALPTAPFVYVADSAGFPYGEKSEAEIAGRVPALLGRLAERY 87 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P L VIACNTA T+ +R+ + +G VPAIK AA +++ I +L T AT+R+ Sbjct: 88 RPRLIVIACNTASTIALPAVRAAL-DLPVVGTVPAIKPAALMSETRTIGVLGTRATVRQA 146 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y +L + S C + S L E G + + ++G F ++ G+ DVI Sbjct: 147 YVDDLAARFASDCRVIRHGSAALVELAEAKLRGETLSSESFTAVLDGLFGQEGGEAIDVI 206 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 V ACTH+PL+ +P PV ++D IARR Sbjct: 207 VNACTHFPLVEAELAAAAPHPVRFVDGGPGIARR 240 >gi|300714768|ref|YP_003739571.1| glutamate racemase [Erwinia billingiae Eb661] gi|299060604|emb|CAX57711.1| Glutamate racemase [Erwinia billingiae Eb661] Length = 260 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V +++R LMP+ H++Y D+V FPYG + + R++ + + +Y Sbjct: 1 MLVFDSGVGGLSVYEELRQLMPDLHYLYAFDNVAFPYGEKSEEFIVHRVVDIVEAVTRRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACN+A T+ LR+ F +G VPAIK AA T++G++ +L+T T++R Sbjct: 61 PLALVVIACNSASTVTLPALRARF-DFPVVGVVPAIKPAARLTRNGIVGLLATRGTVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT L+ + S+C ++ S L E G + +E+++ ++ KE D + Sbjct: 120 YTHELVARFASECKTEMLGSAELVELAEAKLQGKPVPLEEVRRILQPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ +Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLNEELQQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|123440538|ref|YP_001004532.1| glutamate racemase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166231066|sp|A1JI42|MURI_YERE8 RecName: Full=Glutamate racemase gi|122087499|emb|CAL10280.1| putative glutamate racemase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 287 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 90/275 (32%), Positives = 147/275 (53%), Gaps = 17/275 (6%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 K D P + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + Sbjct: 19 KADTAP-----RPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIV 73 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +R++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G Sbjct: 74 ERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNG 132 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++ +L+T T+ +YT +LI + + C I L+ S L E G + ++ +KK + Sbjct: 133 VVGLLATRGTVHASYTQDLIERFATDCKIELLGSSELVELAETKLHGGVVPKEALKKILH 192 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +E D IVL CTH+PL+ Q+ P +D+ +IARR L I++ + Sbjct: 193 PWLAMREPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWL---ISSQE 247 Query: 242 TRVFDD-----HALFLSGKPDIAMRRLMQGFGLKS 271 + D + + L+ D A+ ++QG+G S Sbjct: 248 NVISSDEENIAYCMALNADTD-ALLPVLQGYGFPS 281 >gi|209696283|ref|YP_002264214.1| glutamate racemase [Aliivibrio salmonicida LFI1238] gi|226707584|sp|B6ENT1|MURI_ALISL RecName: Full=Glutamate racemase gi|208010237|emb|CAQ80568.1| glutamate racemase [Aliivibrio salmonicida LFI1238] Length = 265 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 87/233 (37%), Positives = 135/233 (57%), Gaps = 14/233 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +ILIFDSGIGGL V + +R+ +P +IY D+ GFPYG + L +R ++ + Sbjct: 1 MPKNILIFDSGIGGLSVFKDIRYQIPLAKYIYAFDNAGFPYGELTEDILIERTSYIIQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ + VIACNTA T++ LR T S+ +G VPAIK AA +Q I +L+TPAT Sbjct: 61 CHRHKIDIVVIACNTASTVVLPTLR-TLLSIPVVGVVPAIKPAALVSQK--IGLLATPAT 117 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKE 188 ++R+YT +LI S+ S + L+ S L EE GI I+ DEI K +G Sbjct: 118 IKRSYTFDLIKSFASISDVKLLGSTRLVEMAEEKMVGIPVNLIELDEILKSWKG------ 171 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D IVL CTH+P + +++ V +D+ ++IARR + LL ++ ++ Sbjct: 172 --QVDCIVLGCTHFPFLRKEIKEILGRNVLLIDSGEAIARRVKQLLGSVDANK 222 >gi|331685713|ref|ZP_08386296.1| glutamate racemase [Escherichia coli H299] gi|323964327|gb|EGB59810.1| glutamate racemase [Escherichia coli M863] gi|331077184|gb|EGI48399.1| glutamate racemase [Escherichia coli H299] Length = 289 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243 >gi|331680091|ref|ZP_08380753.1| glutamate racemase [Escherichia coli H591] gi|332282913|ref|ZP_08395326.1| glutamate racemase [Shigella sp. D9] gi|323943616|gb|EGB39723.1| glutamate racemase [Escherichia coli H120] gi|324115516|gb|EGC09457.1| glutamate racemase [Escherichia coli E1167] gi|331072417|gb|EGI43750.1| glutamate racemase [Escherichia coli H591] gi|332105265|gb|EGJ08611.1| glutamate racemase [Shigella sp. D9] Length = 289 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243 >gi|58040425|ref|YP_192389.1| glutamate racemase [Gluconobacter oxydans 621H] gi|58002839|gb|AAW61733.1| Glutamate racemase [Gluconobacter oxydans 621H] Length = 281 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 118/218 (54%), Gaps = 1/218 (0%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSGIGG+ V+Q +R L+P H Y+AD FPYG D L R++ L ++ Q Sbjct: 13 LVFDSGIGGMGVVQALRDLLPALHIDYLADTALFPYGEQPDDLLTSRIVSLLVAACERLQ 72 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 P + VIACNTA T+ LR ++ +G VP I+ A ++S +I +LST AT RR Y Sbjct: 73 PDVLVIACNTASTIALPALRQRL-NIPVVGCVPPIRWAGRVSESRVIGLLSTSATARRPY 131 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 L + C + + LA E G I + +++ E+ F + G D + Sbjct: 132 ILQLHRDFAPDCRLITHGARRLADLAERAFLGEPIADSDVQYELTCLFSQPHGGEIDTVG 191 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 L CTHY ++ F +LSP + WLD + ++AR+ R +L Sbjct: 192 LGCTHYTFLMDAFERLSPPGITWLDPAPAVARQVRTVL 229 >gi|197287060|ref|YP_002152932.1| glutamate racemase [Proteus mirabilis HI4320] gi|229486247|sp|B4F1H6|MURI_PROMH RecName: Full=Glutamate racemase gi|194684547|emb|CAR46364.1| glutamate racemase [Proteus mirabilis HI4320] Length = 288 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/229 (34%), Positives = 133/229 (58%), Gaps = 4/229 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL + +++R +P+ H+IYV D+ FPYG + +R++ + S + + Sbjct: 27 TVLVFDSGVGGLSIYREIREKLPDAHYIYVFDNEAFPYGEKPQEFIIERVVRIVSAVAQQ 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 87 HELAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLATRATVKR 146 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + ++C +HL+ S L E+ G K+ DE+++ + KE D Sbjct: 147 PYTHELIERFATECKVHLLGSAELVELAEKKLHGEKVSCDELRRILAPWLKMKEPP--DT 204 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 +VL CTH+PL+ + P +D+ +IARR L+ +N + R Sbjct: 205 VVLGCTHFPLLEEELLSVLPDGTRIIDSGGAIARRTAWLV--VNQDKIR 251 >gi|326387672|ref|ZP_08209278.1| glutamate racemase [Novosphingobium nitrogenifigens DSM 19370] gi|326207718|gb|EGD58529.1| glutamate racemase [Novosphingobium nitrogenifigens DSM 19370] Length = 285 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/247 (35%), Positives = 125/247 (50%), Gaps = 7/247 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSG+GGL VL KMR L+P+ IYVAD+ G PYG + + R+ L + + Sbjct: 26 QPILMFDSGVGGLSVLAKMRLLLPQAPVIYVADNAGLPYGQKTEAQIAARVSGLLGRMTE 85 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + P L IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R Sbjct: 86 RLHPRLVCIACNTASTIALASVREVL-EVPIVGTVPAIKPAAAMTKTGVIGLLGTEATIR 144 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + Y L + + + + L + E G + + + +G R D Sbjct: 145 QGYVDRLESEFAADKRLLRHGAPELVTAAEARLRGRDVDPAVFARAAQALRSMPDGDRID 204 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251 +VLACTH+PLI Q V ++D SD IARR + + Q R D ALF Sbjct: 205 TVVLACTHFPLIERDLAQAFGPDVRFIDGSDGIARR----IAHLTQGQEFLRKEPDLALF 260 Query: 252 LSGKPDI 258 PD+ Sbjct: 261 TRADPDL 267 >gi|157157092|ref|YP_001465466.1| glutamate racemase [Escherichia coli E24377A] gi|157163444|ref|YP_001460762.1| glutamate racemase [Escherichia coli HS] gi|209921453|ref|YP_002295537.1| glutamate racemase [Escherichia coli SE11] gi|218556530|ref|YP_002389444.1| glutamate racemase [Escherichia coli IAI1] gi|218697683|ref|YP_002405350.1| glutamate racemase [Escherichia coli 55989] gi|256021672|ref|ZP_05435537.1| glutamate racemase [Shigella sp. D9] gi|260846776|ref|YP_003224554.1| glutamate racemase MurI [Escherichia coli O103:H2 str. 12009] gi|260858085|ref|YP_003231976.1| glutamate racemase MurI [Escherichia coli O26:H11 str. 11368] gi|260870687|ref|YP_003237089.1| glutamate racemase MurI [Escherichia coli O111:H- str. 11128] gi|293472282|ref|ZP_06664692.1| glutamate racemase [Escherichia coli B088] gi|307314705|ref|ZP_07594302.1| glutamate racemase [Escherichia coli W] gi|331670825|ref|ZP_08371661.1| glutamate racemase [Escherichia coli TA271] gi|167017315|sp|A7ZUI7|MURI_ECO24 RecName: Full=Glutamate racemase gi|167017316|sp|A8A775|MURI_ECOHS RecName: Full=Glutamate racemase gi|226707585|sp|B6I5I5|MURI_ECOSE RecName: Full=Glutamate racemase gi|226722985|sp|B7M723|MURI_ECO8A RecName: Full=Glutamate racemase gi|254766114|sp|B7LA65|MURI_ECO55 RecName: Full=Glutamate racemase gi|157069124|gb|ABV08379.1| glutamate racemase [Escherichia coli HS] gi|157079122|gb|ABV18830.1| glutamate racemase [Escherichia coli E24377A] gi|209914712|dbj|BAG79786.1| glutamate racemase [Escherichia coli SE11] gi|218354415|emb|CAV01209.1| glutamate racemase [Escherichia coli 55989] gi|218363299|emb|CAR00948.1| glutamate racemase [Escherichia coli IAI1] gi|257756734|dbj|BAI28236.1| glutamate racemase MurI [Escherichia coli O26:H11 str. 11368] gi|257761923|dbj|BAI33420.1| glutamate racemase MurI [Escherichia coli O103:H2 str. 12009] gi|257767043|dbj|BAI38538.1| glutamate racemase MurI [Escherichia coli O111:H- str. 11128] gi|291321376|gb|EFE60816.1| glutamate racemase [Escherichia coli B088] gi|306905760|gb|EFN36286.1| glutamate racemase [Escherichia coli W] gi|315063302|gb|ADT77629.1| glutamate racemase [Escherichia coli W] gi|323380635|gb|ADX52903.1| glutamate racemase [Escherichia coli KO11] gi|331062080|gb|EGI34003.1| glutamate racemase [Escherichia coli TA271] Length = 285 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|227354692|ref|ZP_03839111.1| glutamate racemase [Proteus mirabilis ATCC 29906] gi|227165202|gb|EEI50027.1| glutamate racemase [Proteus mirabilis ATCC 29906] Length = 288 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/229 (34%), Positives = 133/229 (58%), Gaps = 4/229 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL + +++R +P+ H+IYV D+ FPYG + +R++ + S + + Sbjct: 27 TVLVFDSGVGGLSIYREIREKLPDAHYIYVFDNEAFPYGEKPQEFIIERVVRIVSAVAQQ 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 87 HELAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLATRATVKR 146 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + ++C +HL+ S L E+ G K+ DE+++ + KE D Sbjct: 147 PYTHELIERFATECKVHLLGSAELVELAEKKLHGEKVSCDELRRILAPWLKMKEPP--DT 204 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 +VL CTH+PL+ + P +D+ +IARR L+ +N + R Sbjct: 205 VVLGCTHFPLLEEELLSVLPDGTRIIDSGGAIARRTAWLV--VNQDKIR 251 >gi|90581103|ref|ZP_01236903.1| glutamate racemase [Vibrio angustum S14] gi|90437799|gb|EAS62990.1| glutamate racemase [Vibrio angustum S14] Length = 270 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 6/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D+ L +R + S ++++Y Sbjct: 7 IVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELADNILIERTNHIVSALVEQY 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR ++ +G VPAIK AA + + +I +L+TPAT++R Sbjct: 67 KADLVVIACNTASTIVLPTLRQNL-NIPIVGVVPAIKPAAKLSNTKVIGLLATPATVKRE 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI+ + S C + ++ S L E+ G I +E+ + + ++ D I Sbjct: 126 YTQQLINQFASDCEVKMIGSTRLVEMAEQKLRGESISLNELSE-----ILAPWQQQVDSI 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +L CTH+PLI + + V +D+ +IA R LL Sbjct: 181 ILGCTHFPLIKEEIKAVLRNEVSVVDSGKAIALRVSSLL 219 >gi|331660531|ref|ZP_08361465.1| glutamate racemase [Escherichia coli TA206] gi|331052480|gb|EGI24517.1| glutamate racemase [Escherichia coli TA206] Length = 289 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 133/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+S +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSSAAIARRTAWLL 243 >gi|218551040|ref|YP_002384831.1| glutamate racemase [Escherichia fergusonii ATCC 35469] gi|226722986|sp|B7LUM6|MURI_ESCF3 RecName: Full=Glutamate racemase gi|218358581|emb|CAQ91229.1| glutamate racemase [Escherichia fergusonii ATCC 35469] Length = 285 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 133/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKNEDFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|331655667|ref|ZP_08356659.1| glutamate racemase [Escherichia coli M718] gi|12518894|gb|AAG59171.1|AE005628_7 glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan [Escherichia coli O157:H7 str. EDL933] gi|13364374|dbj|BAB38321.1| glutamate racemase [Escherichia coli O157:H7 str. Sakai] gi|73857946|gb|AAZ90653.1| glutamate racemase [Shigella sonnei Ss046] gi|81242998|gb|ABB63708.1| glutamate racemase [Shigella dysenteriae Sd197] gi|81247728|gb|ABB68436.1| glutamate racemase [Shigella boydii Sb227] gi|209751918|gb|ACI74266.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli] gi|209751920|gb|ACI74267.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli] gi|209751922|gb|ACI74268.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli] gi|209751924|gb|ACI74269.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli] gi|209751926|gb|ACI74270.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli] gi|331046768|gb|EGI18853.1| glutamate racemase [Escherichia coli M718] Length = 289 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243 >gi|324111408|gb|EGC05389.1| glutamate racemase [Escherichia fergusonii B253] Length = 285 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 133/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKNEDFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|254039229|ref|ZP_04873279.1| glutamate synthase [Escherichia sp. 1_1_43] gi|331644705|ref|ZP_08345824.1| glutamate racemase [Escherichia coli H736] gi|42876|emb|CAA23637.1| unnamed protein product [Escherichia coli] gi|42878|emb|CAA23638.1| unnamed protein product [Escherichia coli] gi|290428|gb|AAA23677.1| glutamate synthase [Escherichia coli] gi|396314|gb|AAC43073.1| glutamate synthase [Escherichia coli str. K-12 substr. MG1655] gi|226838665|gb|EEH70694.1| glutamate synthase [Escherichia sp. 1_1_43] gi|323934456|gb|EGB30869.1| glutamate racemase [Escherichia coli E1520] gi|323939048|gb|EGB35266.1| glutamate racemase [Escherichia coli E482] gi|323969719|gb|EGB65003.1| glutamate racemase [Escherichia coli TA007] gi|331036167|gb|EGI08403.1| glutamate racemase [Escherichia coli H736] Length = 289 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243 >gi|331675461|ref|ZP_08376211.1| glutamate racemase [Escherichia coli TA280] gi|331067521|gb|EGI38926.1| glutamate racemase [Escherichia coli TA280] Length = 289 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243 >gi|320539067|ref|ZP_08038738.1| glutamate racemase [Serratia symbiotica str. Tucson] gi|320030705|gb|EFW12713.1| glutamate racemase [Serratia symbiotica str. Tucson] Length = 287 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 142/258 (55%), Gaps = 4/258 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S + + Sbjct: 27 TVLVFDSGVGGLSVYQEVRQLLPDLHYIYTFDNVAFPYGEKSEEFIVERVLEITSAVQQR 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V+ +IACNTA T+ LR F S +G VPAIK AA +T +G++ +L+T T++R Sbjct: 87 HPMVMVIIACNTASTISLSALRERF-SFPVVGVVPAIKPAARFTANGIVGLLATRGTVQR 145 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT LI + + C I L+ S L E G + +KK + K + D Sbjct: 146 SYTHELIARFATDCKIELLGSSELVELAEAKLHGETVPLVTLKKILHPWL--KMSEPPDT 203 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTH+PL+ + P +D+ +IARR L+ + D+ A ++ Sbjct: 204 VVLGCTHFPLLAEELTLVLPEGTRLVDSGAAIARRTAWLISTQENLLSTQEDNLAYCMAL 263 Query: 255 KPDI-AMRRLMQGFGLKS 271 + A+ ++Q +G K+ Sbjct: 264 DENTDALLPILQRYGFKT 281 >gi|293413408|ref|ZP_06656069.1| glutamate racemase [Escherichia coli B354] gi|291468156|gb|EFF10654.1| glutamate racemase [Escherichia coli B354] Length = 289 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEGVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243 >gi|290477203|ref|YP_003470120.1| glutamate racemase [Xenorhabdus bovienii SS-2004] gi|289176553|emb|CBJ83362.1| glutamate racemase [Xenorhabdus bovienii SS-2004] Length = 287 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/262 (35%), Positives = 142/262 (54%), Gaps = 8/262 (3%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + +ILIFDSG+GGL V Q++R L+PE H+IY D+ FPYG + +R++ + Sbjct: 22 KTARPTILIFDSGVGGLSVYQEIRQLLPELHYIYAFDNEAFPYGEKTAEVIIERVVQVVD 81 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +I ++ + +IACNTA T+ LR F S +G VPAIK AA T + +I +L+T Sbjct: 82 EIQKRHPLAIVIIACNTASTVSLPALRERF-SFPVVGVVPAIKPAAKLTCNRVIGLLATR 140 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ R YT LI + + C +H + S L E G KI + ++K ++ KE Sbjct: 141 ATVNRDYTKELIARFATDCQVHSIGSAELVELAERKLHGEKIPLEILEKILKPWLRMKEP 200 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTH+PLI Q+ P +D+ +IARR L+ N+ D+ Sbjct: 201 P--DTVILGCTHFPLIAEELSQVFPDGTRLIDSGAAIARRTVWLVKNQNSLFLTTADN-- 256 Query: 250 LFLSGKPDI---AMRRLMQGFG 268 L K D+ A+R +++ +G Sbjct: 257 LAYCTKIDLNSEALRPVLRDYG 278 >gi|262041735|ref|ZP_06014926.1| glutamate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040922|gb|EEW42002.1| glutamate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 260 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Sbjct: 61 SLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S L E G + +E+++ + +E D + Sbjct: 120 YTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ +++ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLL 216 >gi|256025994|ref|ZP_05439859.1| glutamate racemase [Escherichia sp. 4_1_40B] Length = 285 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTIKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|323974257|gb|EGB69387.1| glutamate racemase [Escherichia coli TW10509] Length = 289 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243 >gi|331665623|ref|ZP_08366521.1| glutamate racemase [Escherichia coli TA143] gi|331057308|gb|EGI29298.1| glutamate racemase [Escherichia coli TA143] Length = 289 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243 >gi|152972756|ref|YP_001337902.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330001329|ref|ZP_08303946.1| hypothetical protein HMPREF9538_01616 [Klebsiella sp. MS 92-3] gi|150957605|gb|ABR79635.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328537720|gb|EGF63925.1| hypothetical protein HMPREF9538_01616 [Klebsiella sp. MS 92-3] Length = 260 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Sbjct: 61 PLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S L E G + +E+++ + +E D + Sbjct: 120 YTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ +++ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLL 216 >gi|110807826|ref|YP_691346.1| glutamate racemase [Shigella flexneri 5 str. 8401] gi|161367471|ref|NP_290606.2| glutamate racemase [Escherichia coli O157:H7 EDL933] gi|161485830|ref|NP_709771.3| glutamate racemase [Shigella flexneri 2a str. 301] gi|161486412|ref|NP_838913.2| glutamate racemase [Shigella flexneri 2a str. 2457T] gi|161950019|ref|YP_405199.2| glutamate racemase [Shigella dysenteriae Sd197] gi|161984807|ref|YP_410264.2| glutamate racemase [Shigella boydii Sb227] gi|161986399|ref|YP_312888.2| glutamate racemase [Shigella sonnei Ss046] gi|162139734|ref|NP_312925.2| glutamate racemase [Escherichia coli O157:H7 str. Sakai] gi|254795974|ref|YP_003080811.1| glutamate racemase [Escherichia coli O157:H7 str. TW14359] gi|261226407|ref|ZP_05940688.1| glutamate racemase [Escherichia coli O157:H7 str. FRIK2000] gi|261256807|ref|ZP_05949340.1| glutamate racemase [Escherichia coli O157:H7 str. FRIK966] gi|291285389|ref|YP_003502207.1| Glutamate racemase [Escherichia coli O55:H7 str. CB9615] gi|293417477|ref|ZP_06660101.1| glutamate racemase [Escherichia coli B185] gi|54037865|sp|P63634|MURI_SHIFL RecName: Full=Glutamate racemase gi|54041258|sp|P63633|MURI_ECO57 RecName: Full=Glutamate racemase gi|123342230|sp|Q0SY24|MURI_SHIF8 RecName: Full=Glutamate racemase gi|110617374|gb|ABF06041.1| glutamate racemase [Shigella flexneri 5 str. 8401] gi|254595374|gb|ACT74735.1| glutamate racemase [Escherichia coli O157:H7 str. TW14359] gi|281603361|gb|ADA76345.1| putative Glutamate racemase [Shigella flexneri 2002017] gi|290765262|gb|ADD59223.1| Glutamate racemase [Escherichia coli O55:H7 str. CB9615] gi|291430997|gb|EFF03993.1| glutamate racemase [Escherichia coli B185] gi|320639143|gb|EFX08779.1| glutamate racemase [Escherichia coli O157:H7 str. G5101] gi|320644535|gb|EFX13596.1| glutamate racemase [Escherichia coli O157:H- str. 493-89] gi|320649859|gb|EFX18374.1| glutamate racemase [Escherichia coli O157:H- str. H 2687] gi|320655208|gb|EFX23157.1| glutamate racemase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660833|gb|EFX28283.1| glutamate racemase [Escherichia coli O55:H7 str. USDA 5905] gi|320665951|gb|EFX32977.1| glutamate racemase [Escherichia coli O157:H7 str. LSU-61] Length = 285 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|89110063|ref|AP_003843.1| glutamate racemase [Escherichia coli str. K-12 substr. W3110] gi|90111671|ref|NP_418402.2| glutamate racemase [Escherichia coli str. K-12 substr. MG1655] gi|170083436|ref|YP_001732756.1| glutamate racemase [Escherichia coli str. K-12 substr. DH10B] gi|238903032|ref|YP_002928828.1| glutamate racemase [Escherichia coli BW2952] gi|253775395|ref|YP_003038226.1| glutamate racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163917|ref|YP_003047025.1| glutamate racemase [Escherichia coli B str. REL606] gi|307140666|ref|ZP_07500022.1| glutamate racemase [Escherichia coli H736] gi|730081|sp|P22634|MURI_ECOLI RecName: Full=Glutamate racemase gi|229486276|sp|B1XBX8|MURI_ECODH RecName: Full=Glutamate racemase gi|259509813|sp|C5A0R6|MURI_ECOBW RecName: Full=Glutamate racemase gi|85676094|dbj|BAE77344.1| glutamate racemase [Escherichia coli str. K12 substr. W3110] gi|87082355|gb|AAC76949.2| glutamate racemase [Escherichia coli str. K-12 substr. MG1655] gi|169891271|gb|ACB04978.1| glutamate racemase [Escherichia coli str. K-12 substr. DH10B] gi|238861332|gb|ACR63330.1| glutamate racemase [Escherichia coli BW2952] gi|242379502|emb|CAQ34318.1| glutamate racemase [Escherichia coli BL21(DE3)] gi|253326439|gb|ACT31041.1| glutamate racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975818|gb|ACT41489.1| glutamate racemase [Escherichia coli B str. REL606] gi|253979974|gb|ACT45644.1| glutamate racemase [Escherichia coli BL21(DE3)] gi|260451197|gb|ACX41619.1| glutamate racemase [Escherichia coli DH1] gi|309704391|emb|CBJ03740.1| glutamate racemase [Escherichia coli ETEC H10407] gi|315138532|dbj|BAJ45691.1| glutamate synthase [Escherichia coli DH1] gi|323959264|gb|EGB54925.1| glutamate racemase [Escherichia coli H489] Length = 285 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|209542243|ref|YP_002274472.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5] gi|209529920|gb|ACI49857.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5] Length = 272 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 1/228 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL FDSGIGG +++ +R +P Y+AD+ +PYG D L +R++ L Sbjct: 1 MARRILAFDSGIGGFGIVRALRTRLPGVSLDYLADNAVYPYGEQPDTDLIRRIVALIGQA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +D P L VIACNTA TL LR + ++ F+G VP IK AA +++ I +L+T AT Sbjct: 61 IDALDPDLVVIACNTASTLALPALRERY-ALPFVGCVPPIKWAAELSRTRTIGLLATRAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +RR Y +L Y C + + LA E G I D I +E++ F + G Sbjct: 120 VRRPYLGDLQRRYAPDCTLLAHGARGLADLAECAFRGHAIATDAIDRELDALFGQPGGAA 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 DV+ + CTHY ++ R SP WLD ++++AR+A +L + T Sbjct: 180 IDVVGIGCTHYTFLMDRLRAASPPGTIWLDPAEAVARQAATVLGPLGT 227 >gi|284924068|emb|CBG37167.1| glutamate racemase [Escherichia coli 042] Length = 285 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|148556725|ref|YP_001264307.1| glutamate racemase [Sphingomonas wittichii RW1] gi|148501915|gb|ABQ70169.1| glutamate racemase [Sphingomonas wittichii RW1] Length = 264 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 119/214 (55%), Gaps = 1/214 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL VL R L+P+ ++YVAD+ GFPYG + + R+ L ++++Y Sbjct: 7 ILMFDSGVGGLSVLAPTRALLPQASYVYVADNGGFPYGIRSEAEIAARVPALLGRLVERY 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P L VIACNTA T+ +R+ + +G VPAIK AA + + I +L T AT+R+ Sbjct: 67 RPRLVVIACNTASTIALAAVRAAL-DLPIVGTVPAIKPAAERSAARAIGVLGTDATVRQP 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y +L + + C + S L E G + + ++G + G R D++ Sbjct: 126 YVDDLSARFAADCLVLRHGSARLVELAEAKLRGEPTDPADYRAVLDGLLGQPGGDRIDMV 185 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VLACTH+PL+ +P P+ ++D IARR Sbjct: 186 VLACTHFPLVEAELAAAAPRPLRFVDGGPGIARR 219 >gi|259906847|ref|YP_002647203.1| glutamate racemase [Erwinia pyrifoliae Ep1/96] gi|224962469|emb|CAX53924.1| Glutamate racemase [Erwinia pyrifoliae Ep1/96] gi|283476639|emb|CAY72467.1| murI [Erwinia pyrifoliae DSM 12163] Length = 283 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 83/257 (32%), Positives = 141/257 (54%), Gaps = 4/257 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++LIFDSG+GGL V ++ L+P+ H++Y D+V FPYG + + +R+M + + + Sbjct: 23 TVLIFDSGVGGLSVYNEICALLPDLHYLYAFDNVAFPYGEKSEEFIVERVMAIVTAVTRL 82 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T++R Sbjct: 83 YPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGTVKR 141 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + +C ++ S L E G + +E+++ ++ + + D Sbjct: 142 PYTHELIARFAGECKTEMLGSGELVEIAEAKLHGQPVALEEVRRILQPWL--RMPEPPDT 199 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS- 253 +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL L Sbjct: 200 VVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPEALSADDNMALCLDI 259 Query: 254 GKPDIAMRRLMQGFGLK 270 + + + ++Q +G K Sbjct: 260 TEQAVQLIPVLQRYGFK 276 >gi|218707594|ref|YP_002415113.1| glutamate racemase [Escherichia coli UMN026] gi|218434691|emb|CAR15624.2| glutamate racemase [Escherichia coli UMN026] Length = 289 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243 >gi|271502433|ref|YP_003335459.1| glutamate racemase [Dickeya dadantii Ech586] gi|270345988|gb|ACZ78753.1| glutamate racemase [Dickeya dadantii Ech586] Length = 290 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 142/258 (55%), Gaps = 4/258 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ + + + Sbjct: 25 TVLVFDSGVGGLSVYDEVRKLLPDLHYIYAFDNEAFPYGEKPEQFIIERVLSIVEAVEKQ 84 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + L +IACNTA T+ LR+ F +G VPA+K AA T++G++ +L+T AT++R Sbjct: 85 HPLSLVIIACNTASTISLPALRTRF-DFPVVGVVPAVKPAAKLTRNGVVGLLATRATVQR 143 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT LI + C I L+ S L E G + ED ++K + K + D Sbjct: 144 SYTHELISRFAHDCQILLLGSAELVEFAEAKLQGESVSEDVLRKILRPWL--KLPEPPDT 201 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTH+PL+ + + P +D+ +IARR L+ ++ + + A LS Sbjct: 202 VVLGCTHFPLLTEELQHVLPDGTRLVDSGSAIARRTAWLIEHLDNPKCSTEKNLAYCLSI 261 Query: 255 KPDI-AMRRLMQGFGLKS 271 P + A+ +++ +G S Sbjct: 262 TPKVAALWPVLRRYGFHS 279 >gi|269103679|ref|ZP_06156376.1| glutamate racemase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163577|gb|EEZ42073.1| glutamate racemase [Photobacterium damselae subsp. damselae CIP 102761] Length = 273 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 80/242 (33%), Positives = 131/242 (54%), Gaps = 7/242 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 ++IFDSG+GGL V Q++R +P+ +IY D+ FPYG L +R + ++++ ++ Sbjct: 12 VVIFDSGVGGLSVYQEIRARLPQAQYIYAFDNAAFPYGELPQQVLIERACHIITNLVARH 71 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q L V+ACNTA T++ LR ++ +G VPAIK AA + S I +L+TPAT+ R Sbjct: 72 QADLVVVACNTASTIVLPALRQQL-TIPVVGVVPAIKPAAQASLSKSIGLLATPATVERP 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +L+ + C + ++ + L EE G + +E+ + + + D I Sbjct: 131 YTHDLVKQFAQDCQVLMLGTTRLVEMAEEKLQGEVVSLNELTQ-----ILAPWLGKVDTI 185 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSG 254 VL CTH+PL+ +Q+ V +D+ +IA R LLP T + + D+ + S Sbjct: 186 VLGCTHFPLMRAEIQQVCGAGVTIIDSGKAIANRVVSLLPESATQDAALEEMDNLTYCSA 245 Query: 255 KP 256 KP Sbjct: 246 KP 247 >gi|218701323|ref|YP_002408952.1| glutamate racemase [Escherichia coli IAI39] gi|226722984|sp|B7NU33|MURI_ECO7I RecName: Full=Glutamate racemase gi|218371309|emb|CAR19141.1| glutamate racemase [Escherichia coli IAI39] Length = 285 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|251787784|ref|YP_003002505.1| glutamate racemase [Dickeya zeae Ech1591] gi|247536405|gb|ACT05026.1| glutamate racemase [Dickeya zeae Ech1591] Length = 290 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 145/259 (55%), Gaps = 6/259 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ + D ++K Sbjct: 25 TVLVFDSGVGGLSVYDEVRKLLPDLHYIYAFDNEAFPYGEKPEQFIIERVLSIV-DAVEK 83 Query: 75 YQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 P+ L +IACNTA T+ LR F +G VPA+K AA T++G++ +L+T AT++ Sbjct: 84 QHPLSLVIIACNTASTISLPALRERF-DFPVVGVVPAVKPAAKLTRNGVVGLLATRATVQ 142 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R+YT LI + C I L+ S L E G + E+ ++K + K + D Sbjct: 143 RSYTHELISRFAHDCQILLLGSAELVEFAEAKLQGESVSEEVLRKILRPWL--KLAEPPD 200 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTH+PL+ +++ P +D+ +IARR L+ ++ + + A LS Sbjct: 201 TVVLGCTHFPLLAEELQRVLPDGTRLVDSGSAIARRTAWLIEHLDNPKCSTEKNLAYCLS 260 Query: 254 GKPDI-AMRRLMQGFGLKS 271 P + A+ +++ +G S Sbjct: 261 ITPKVAALWPVLRRYGFNS 279 >gi|215489308|ref|YP_002331739.1| glutamate racemase [Escherichia coli O127:H6 str. E2348/69] gi|215267380|emb|CAS11831.1| glutamate racemase MurI [Escherichia coli O127:H6 str. E2348/69] Length = 285 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|237703008|ref|ZP_04533489.1| glutamate racemase MurI [Escherichia sp. 3_2_53FAA] gi|115515364|gb|ABJ03439.1| glutamate racemase MurI [Escherichia coli APEC O1] gi|226902945|gb|EEH89204.1| glutamate racemase MurI [Escherichia sp. 3_2_53FAA] gi|323954254|gb|EGB50039.1| glutamate racemase [Escherichia coli H263] Length = 289 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243 >gi|110345903|gb|ABG72140.1| glutamate racemase [Escherichia coli 536] Length = 289 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243 >gi|91213519|ref|YP_543505.1| glutamate racemase [Escherichia coli UTI89] gi|162317562|ref|YP_859563.2| glutamate racemase [Escherichia coli APEC O1] gi|218561042|ref|YP_002393955.1| glutamate racemase [Escherichia coli S88] gi|122421619|sp|Q1R3U0|MURI_ECOUT RecName: Full=Glutamate racemase gi|226722983|sp|B7MIA7|MURI_ECO45 RecName: Full=Glutamate racemase gi|91075093|gb|ABE09974.1| glutamate racemase [Escherichia coli UTI89] gi|218367811|emb|CAR05605.1| glutamate racemase [Escherichia coli S88] gi|294491460|gb|ADE90216.1| glutamate racemase [Escherichia coli IHE3034] gi|307629048|gb|ADN73352.1| glutamate racemase [Escherichia coli UM146] gi|323949465|gb|EGB45354.1| glutamate racemase [Escherichia coli H252] Length = 285 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|218692257|ref|YP_002400469.1| glutamate racemase [Escherichia coli ED1a] gi|29839540|sp|Q8FB89|MURI_ECOL6 RecName: Full=Glutamate racemase gi|254766115|sp|B7MR95|MURI_ECO81 RecName: Full=Glutamate racemase gi|218429821|emb|CAR10783.2| glutamate racemase [Escherichia coli ED1a] Length = 285 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NIPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|162138273|ref|YP_672041.2| glutamate racemase [Escherichia coli 536] gi|306813762|ref|ZP_07447938.1| glutamate racemase [Escherichia coli NC101] gi|331649824|ref|ZP_08350904.1| glutamate racemase [Escherichia coli M605] gi|281181040|dbj|BAI57370.1| glutamate racemase [Escherichia coli SE15] gi|305852760|gb|EFM53207.1| glutamate racemase [Escherichia coli NC101] gi|331041457|gb|EGI13607.1| glutamate racemase [Escherichia coli M605] Length = 285 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|87199816|ref|YP_497073.1| glutamate racemase [Novosphingobium aromaticivorans DSM 12444] gi|87135497|gb|ABD26239.1| glutamate racemase [Novosphingobium aromaticivorans DSM 12444] Length = 277 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 7/245 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL VL+K+R ++PE IYVAD+ G PYG + + R+ L + ++ Sbjct: 20 LLLFDSGVGGLSVLRKVRAVLPEAPVIYVADNAGLPYGAKTEAQIAARVSGLLGRLTERL 79 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P L IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R+ Sbjct: 80 APRLVCIACNTASTIALASVREVL-EVPIVGTVPAIKPAAALTRTGVIGLLGTEATIRQA 138 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y L + + H+ + L + E G ++ + G R D + Sbjct: 139 YVDRLEAEFAADKHLLRHGAPELVAAAEAKLRGERVDPAVYARAAAALRAMPGGDRIDTV 198 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALFLS 253 VLACTH+PL+ R+ V ++D SD IARR + + Q R D ALF Sbjct: 199 VLACTHFPLVEDELREAFGPEVRFVDGSDGIARR----IAHLTQGQAWRRTEPDLALFTR 254 Query: 254 GKPDI 258 G D+ Sbjct: 255 GGEDV 259 >gi|307128966|ref|YP_003880982.1| glutamate racemase [Dickeya dadantii 3937] gi|306526495|gb|ADM96425.1| glutamate racemase [Dickeya dadantii 3937] Length = 290 Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 148/259 (57%), Gaps = 6/259 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ + D ++K Sbjct: 25 TVLVFDSGVGGLSVYDEVRKLLPDLHYIYTFDNEAFPYGEKPEQFIIERVVSIV-DAVEK 83 Query: 75 YQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 P+ L +IACNTA T+ LR+ F + +G VPA+K AA T++G++ +L+T AT++ Sbjct: 84 QHPLSLVIIACNTASTISLPALRARF-NFPVVGVVPAVKPAAKLTRNGVVGLLATRATVQ 142 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT LI + + C I L+ S L E G + E+ ++K ++ K + D Sbjct: 143 RPYTHELISRFANDCQILLLGSAELVEWGEAKLQGETVPEEVLRKILKPWL--KLPEPPD 200 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTH+PL+ +Q+ P +D+ +IARR L+ ++ + + A LS Sbjct: 201 TVVLGCTHFPLLSEELQQVLPDGTRLVDSGTAIARRTAWLIEHLDNPKLSTERNLAYCLS 260 Query: 254 GKPDI-AMRRLMQGFGLKS 271 P + A+ +++ +G + Sbjct: 261 ITPKVAALSPVLRRYGFSA 279 >gi|237728080|ref|ZP_04558561.1| glutamate racemase [Citrobacter sp. 30_2] gi|226910337|gb|EEH96255.1| glutamate racemase [Citrobacter sp. 30_2] Length = 283 Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 133/234 (56%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSEEFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T AT++R+YT LI + ++C I ++ S L E G + +E+++ + Sbjct: 128 GVVGLLATRATVKRSYTHELIARFANECQIAMLGSAELVELAEAKLHGETVSLEELRRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWL--RMSEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|114045687|ref|YP_736237.1| glutamate racemase [Shewanella sp. MR-7] gi|122945064|sp|Q0I0C5|MURI_SHESR RecName: Full=Glutamate racemase gi|113887129|gb|ABI41180.1| glutamate racemase [Shewanella sp. MR-7] Length = 272 Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 80/234 (34%), Positives = 130/234 (55%), Gaps = 13/234 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R L+P +++ Y+ D+ PYG E+ L + L + Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHNYCYLFDNARLPYGELEEQELISGCVALIDQV 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK----KEIEGCFIEK 187 ++R YT LI + CH+ L S L E+ KI ++ ++ +E Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQ-----KIATGQLDMARLAQVLSPIVEA 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q Sbjct: 175 D---LDVLVLGCTHFPMLRDELQQVLGKGVTLLDSGEAIAKRVKTLLAETKSEQ 225 >gi|168262957|ref|ZP_02684930.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194446431|ref|YP_002043393.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|238912271|ref|ZP_04656108.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194405094|gb|ACF65316.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|205348286|gb|EDZ34917.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 260 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S L E G + +E+++ + E D + Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|197248641|ref|YP_002149052.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197212344|gb|ACH49741.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 260 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S L E G + +E+++ + E D + Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|161617274|ref|YP_001591239.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197262992|ref|ZP_03163066.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198241754|ref|YP_002218058.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386743|ref|ZP_03213355.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|161366638|gb|ABX70406.1| hypothetical protein SPAB_05116 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197241247|gb|EDY23867.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936270|gb|ACH73603.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603841|gb|EDZ02386.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|312915247|dbj|BAJ39221.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225423|gb|EFX50481.1| Glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 260 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S L E G + +E+++ + E D + Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|161505378|ref|YP_001572490.1| glutamate racemase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|194472599|ref|ZP_03078583.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738355|ref|YP_002117043.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|213051820|ref|ZP_03344698.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427064|ref|ZP_03359814.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213646315|ref|ZP_03376368.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224585944|ref|YP_002639743.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|289830049|ref|ZP_06547498.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|16504616|emb|CAD09499.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139435|gb|AAO71002.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|160866725|gb|ABX23348.1| hypothetical protein SARI_03532 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|194458963|gb|EDX47802.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713857|gb|ACF93078.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|224470472|gb|ACN48302.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322613115|gb|EFY10059.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619257|gb|EFY16140.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322626123|gb|EFY22935.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626417|gb|EFY23223.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632469|gb|EFY29217.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635048|gb|EFY31769.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642749|gb|EFY39339.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646426|gb|EFY42937.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648559|gb|EFY45009.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654820|gb|EFY51138.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657287|gb|EFY53567.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662226|gb|EFY58441.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669773|gb|EFY65917.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672032|gb|EFY68147.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675753|gb|EFY71825.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681831|gb|EFY77857.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322683974|gb|EFY79983.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193245|gb|EFZ78460.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197603|gb|EFZ82736.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202193|gb|EFZ87248.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207172|gb|EFZ92124.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211374|gb|EFZ96215.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218581|gb|EGA03289.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220937|gb|EGA05369.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226066|gb|EGA10284.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231593|gb|EGA15705.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236901|gb|EGA20972.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239421|gb|EGA23470.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243986|gb|EGA27997.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249349|gb|EGA33266.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250408|gb|EGA34291.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258862|gb|EGA42514.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260886|gb|EGA44486.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265226|gb|EGA48723.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270448|gb|EGA53894.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 260 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S L E G + +E+++ + E D + Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|103486695|ref|YP_616256.1| glutamate racemase [Sphingopyxis alaskensis RB2256] gi|123253315|sp|Q1GTU9|MURI_SPHAL RecName: Full=Glutamate racemase gi|98976772|gb|ABF52923.1| glutamate racemase [Sphingopyxis alaskensis RB2256] Length = 268 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 115/214 (53%), Gaps = 1/214 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL FDSG+GGL VL R L+P +Y AD G PYG + L R+ L ++++Y Sbjct: 10 ILFFDSGLGGLSVLGPTRALLPTAPIVYAADYAGLPYGRKSNEELAARVPALLGRLVERY 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 QP L+VIACNTA T+ +R+ + +G VPAIK AA T+SG+I +L T AT+R+ Sbjct: 70 QPRLAVIACNTASTIALGHVRAAL-DLPIVGTVPAIKPAAEMTKSGVIGVLGTEATVRQP 128 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y +L + + S L + E G + + I + + G + G DV+ Sbjct: 129 YVDDLSARFAGGKTVLRHGSPGLVTGAEARLRGETVDPEVIARAVAGLRDQPRGDAIDVV 188 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VLACTH+PL+ + V +D ++ IARR Sbjct: 189 VLACTHFPLLKDELQAGFGRGVALIDGAEGIARR 222 >gi|311281559|ref|YP_003943790.1| glutamate racemase [Enterobacter cloacae SCF1] gi|308750754|gb|ADO50506.1| glutamate racemase [Enterobacter cloacae SCF1] Length = 283 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/238 (33%), Positives = 132/238 (55%), Gaps = 7/238 (2%) Query: 1 MKIDNYPCEKKLQN----SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56 ++ +N C + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG Sbjct: 5 LQDENTTCRAAIPSDPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKS 64 Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA Sbjct: 65 ESFIVERVVEIVTAVQARYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T +G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+ Sbjct: 124 LTANGIVGLLATRGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEEL 183 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++ + E D +VL CTH+PL+ + P +D+ +IARR LL Sbjct: 184 RRILRPWLRMPEPP--DTVVLGCTHFPLLQEELLAVLPEGTRLVDSGAAIARRTAWLL 239 >gi|238897697|ref|YP_002923376.1| glutamate racemase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465454|gb|ACQ67228.1| glutamate racemase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 271 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 5/256 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 S+LI DSGIGGL V Q+M+ L+P H+IY D+ GFPYG + + ++++ + + I K Sbjct: 12 SVLILDSGIGGLSVYQEMKKLLPHIHYIYCFDNEGFPYGEKSEIFILEQIVRIMTAIQKK 71 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + +IACNTA T++ LR F S +GAVPAIK AA T++G++ +L+TPAT++R Sbjct: 72 HFLNCVIIACNTASTIVLPILRQRF-SFPIIGAVPAIKPAAHITRNGVLGLLATPATIKR 130 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT +LI + C + L+ S L E+ G +I + KK ++ K D Sbjct: 131 PYTLDLIKRFAKNCQVELLGSSELVYLAEKKVLGTEISINMFKKILQPWL--NLQKVPDT 188 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 IVL CTH+P I++ +Q+ + + +IA+RA L+ F + A + Sbjct: 189 IVLGCTHFPFIINELQQIF-LNARMIHSGAAIAKRAFSLIGSQQNTSVHSFKNKAYCVKK 247 Query: 255 KPDI-AMRRLMQGFGL 269 D ++ +++ +G Sbjct: 248 NGDTESLSPILEKYGF 263 >gi|157883967|pdb|2JFN|A Chain A, Crystal Structure Of Escherichia Coli Glutamate Racemase In Complex With L-Glutamate And Activator Udp-Murnac-Ala Length = 267 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 127/220 (57%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++ Sbjct: 4 TVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQER 63 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R Sbjct: 64 YPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKR 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT LI + ++C I ++ S + E G + D +K+ + KE D Sbjct: 123 SYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DT 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 181 VVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 220 >gi|261346833|ref|ZP_05974477.1| glutamate racemase [Providencia rustigianii DSM 4541] gi|282565012|gb|EFB70547.1| glutamate racemase [Providencia rustigianii DSM 4541] Length = 287 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL V ++++ ++P H+IY D+ FPYG + + +R+ + + + K Sbjct: 27 TILVFDSGVGGLSVYREVKKMLPNAHYIYAFDNEAFPYGEKTEEFIIERVYQIVNAVAKK 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + ++VIACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+ R Sbjct: 87 HPLTIAVIACNTASTVSLPNLRAHF-TFPIVGVVPAIKPATKLTRNGIVGLLATKGTVNR 145 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + + C + L+ S L E G + DE+ + I KE D Sbjct: 146 EYTKELIERFATDCKVILLGSAELVQLAERKLHGETLPLDEVAQAIRPWIKMKEAP--DT 203 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++L CTH+PLIV ++ P ++D+ +IARR L+ Sbjct: 204 VILGCTHFPLIVEELEKVLPNGTRFIDSGAAIARRTVWLI 243 >gi|238921669|ref|YP_002935184.1| glutamate racemase [Edwardsiella ictaluri 93-146] gi|238871238|gb|ACR70949.1| glutamate racemase, putative [Edwardsiella ictaluri 93-146] Length = 260 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 124/219 (56%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG E + +R++ + + + ++ Sbjct: 1 MLVFDSGVGGLSVYQEIRALLPDLHYIYAFDNQGFPYGEKEAVFITERVLRIVASLHQRH 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA T++ LR+ FP +G VPAIK AA T++G++ +L+T AT++R Sbjct: 61 TLSAMVVACNTASTIVLPALRARFP-FPVVGVVPAIKPAAKLTRNGIVGLLATRATVQRA 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + C I ++ S L E G + ++ + E D + Sbjct: 120 YTHELIARFATDCQIKMLGSAELVELAEAKLHGEALDLQRLRTILRPWLTMAEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR L+ Sbjct: 178 VLGCTHFPLLRDELAQVLPAGTRLVDSGAAIARRVAWLI 216 >gi|194449428|ref|YP_002048128.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194407732|gb|ACF67951.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] Length = 260 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 125/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPNLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S L E G + +E+++ + E D + Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|213609517|ref|ZP_03369343.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 233 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S L E G + +E+++ + E D + Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|269140807|ref|YP_003297508.1| glutamate racemase [Edwardsiella tarda EIB202] gi|267986468|gb|ACY86297.1| glutamate racemase [Edwardsiella tarda EIB202] gi|304560567|gb|ADM43231.1| Glutamate racemase [Edwardsiella tarda FL6-60] Length = 260 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 123/219 (56%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG E + R++ + + + ++ Sbjct: 1 MLVFDSGVGGLSVYQEIRALLPDLHYIYAFDNQGFPYGEKEAAFITDRVLRIVASLHQRH 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA T++ LR+ FP +G VPAIK AA T++G++ +L+T AT++R Sbjct: 61 TLSAMVVACNTASTIVLPALRARFP-FPVVGVVPAIKPAAKLTRNGVVGLLATRATVQRA 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + C I ++ S L E G + ++ + E D + Sbjct: 120 YTHELIARFATDCQIKMLGSAELVELAEAKLHGEALDLQRLRTILRPWLTMAEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR L+ Sbjct: 178 VLGCTHFPLLRDELAQVLPAGTRLVDSGAAIARRVAWLI 216 >gi|260595994|ref|YP_003208565.1| glutamate racemase [Cronobacter turicensis z3032] gi|260215171|emb|CBA26986.1| Glutamate racemase [Cronobacter turicensis z3032] Length = 288 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 82/257 (31%), Positives = 140/257 (54%), Gaps = 4/257 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + + Sbjct: 28 TILVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQAR 87 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y L+VIACN+A T+ LR F + +G VPAIK AA T +G++ +L+T T++R Sbjct: 88 YPLALAVIACNSASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRGTVKR 146 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + ++C I ++ S L E G + + +++ + E D Sbjct: 147 PYTHELIARFANECQIEMLGSAELVEIAEAKLHGEPVSLEALRRVLRPWLRMPEPP--DT 204 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTH+PL+ Q+ P +D+ +IARR LL ++ A ++ Sbjct: 205 VVLGCTHFPLLADELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDACSFDENIAYCMAL 264 Query: 255 KPDIA-MRRLMQGFGLK 270 P++A + ++Q +G Sbjct: 265 TPEVAQLMSVLQRYGFN 281 >gi|325499291|gb|EGC97150.1| glutamate racemase [Escherichia fergusonii ECD227] Length = 262 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|331005029|ref|ZP_08328434.1| Glutamate racemase [gamma proteobacterium IMCC1989] gi|330421157|gb|EGG95418.1| Glutamate racemase [gamma proteobacterium IMCC1989] Length = 273 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 129/247 (52%), Gaps = 9/247 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL +LQ++R P F Y +D+ FPYG + L +R+ + + Sbjct: 7 ILVFDSGVGGLSILQEIRRQYPHCCFFYASDNAAFPYGTKTEEELIERVDIVLHTLQQTT 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q + V+ACNTA T+ +R F S +G VPAIK AAA +QS +I +L+TP T++R Sbjct: 67 QADIIVVACNTASTVALPRIRERF-SQPVIGVVPAIKPAAALSQSKVIGVLATPGTVKRK 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + C + + + L E+ G I + +++ ++ D + Sbjct: 126 YTQQLIAQFAEDCEVISIGTSELVHLAEQKLRGETITQQQLEPIVQRLI---HNSAIDTV 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT----HQTRVFDDHALF 251 VLACTH+PL+ + P W+D+ ++IARR L +N H + D A F Sbjct: 183 VLACTHFPLLKKELQTALPNIKHWIDSGEAIARRVGYWLDTLNIDLGDHASNT-DSTAYF 241 Query: 252 LSGKPDI 258 + P+I Sbjct: 242 TAQSPNI 248 >gi|191169526|ref|ZP_03031256.1| glutamate racemase [Escherichia coli B7A] gi|193063978|ref|ZP_03045064.1| glutamate racemase [Escherichia coli E22] gi|193067960|ref|ZP_03048925.1| glutamate racemase [Escherichia coli E110019] gi|194429405|ref|ZP_03061929.1| glutamate racemase [Escherichia coli B171] gi|194433275|ref|ZP_03065556.1| glutamate racemase [Shigella dysenteriae 1012] gi|300902584|ref|ZP_07120560.1| hypothetical protein HMPREF9536_00757 [Escherichia coli MS 84-1] gi|300926197|ref|ZP_07142003.1| hypothetical protein HMPREF9548_04219 [Escherichia coli MS 182-1] gi|301324906|ref|ZP_07218467.1| hypothetical protein HMPREF9535_00045 [Escherichia coli MS 78-1] gi|309797134|ref|ZP_07691531.1| hypothetical protein HMPREF9348_04371 [Escherichia coli MS 145-7] gi|190900431|gb|EDV60250.1| glutamate racemase [Escherichia coli B7A] gi|192929443|gb|EDV83051.1| glutamate racemase [Escherichia coli E22] gi|192958580|gb|EDV89018.1| glutamate racemase [Escherichia coli E110019] gi|194412552|gb|EDX28850.1| glutamate racemase [Escherichia coli B171] gi|194418559|gb|EDX34647.1| glutamate racemase [Shigella dysenteriae 1012] gi|300405344|gb|EFJ88882.1| hypothetical protein HMPREF9536_00757 [Escherichia coli MS 84-1] gi|300417762|gb|EFK01073.1| hypothetical protein HMPREF9548_04219 [Escherichia coli MS 182-1] gi|300848190|gb|EFK75950.1| hypothetical protein HMPREF9535_00045 [Escherichia coli MS 78-1] gi|308119213|gb|EFO56475.1| hypothetical protein HMPREF9348_04371 [Escherichia coli MS 145-7] gi|320180303|gb|EFW55235.1| Glutamate racemase [Shigella boydii ATCC 9905] gi|320201538|gb|EFW76116.1| Glutamate racemase [Escherichia coli EC4100B] gi|323155494|gb|EFZ41673.1| glutamate racemase [Escherichia coli EPECa14] gi|323161254|gb|EFZ47167.1| glutamate racemase [Escherichia coli E128010] gi|323177993|gb|EFZ63577.1| glutamate racemase [Escherichia coli 1180] gi|323182072|gb|EFZ67482.1| glutamate racemase [Escherichia coli 1357] gi|324019672|gb|EGB88891.1| hypothetical protein HMPREF9542_01635 [Escherichia coli MS 117-3] gi|332083985|gb|EGI89194.1| glutamate racemase [Shigella boydii 5216-82] gi|332085315|gb|EGI90489.1| glutamate racemase [Shigella dysenteriae 155-74] Length = 262 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|327250613|gb|EGE62321.1| glutamate racemase [Escherichia coli STEC_7v] Length = 262 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|117918638|ref|YP_867830.1| glutamate racemase [Shewanella sp. ANA-3] gi|166231054|sp|A0KRK5|MURI_SHESA RecName: Full=Glutamate racemase gi|117610970|gb|ABK46424.1| glutamate racemase [Shewanella sp. ANA-3] Length = 273 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 134/246 (54%), Gaps = 14/246 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R L+P + + Y+ D+ PYG E+ L + L + Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHDYCYLFDNARLPYGELEEQELISGCVALIDQV 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK----KEIEGCFIEK 187 ++R YT LI + CH+ L S L E+ KI ++ ++ +E Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQ-----KIATGQLDMVRLTQVLSPIVEA 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFD 246 + DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q + D Sbjct: 175 D---LDVLVLGCTHFPMLRDELQQVLGQGVTLLDSGEAIAKRVKTLLAETKSDEQVQEED 231 Query: 247 DHALFL 252 H+ L Sbjct: 232 AHSNLL 237 >gi|315298482|gb|EFU57737.1| hypothetical protein HMPREF9545_02463 [Escherichia coli MS 16-3] Length = 262 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 127/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+S +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSSAAIARRTAWLL 216 >gi|322834972|ref|YP_004214999.1| glutamate racemase [Rahnella sp. Y9602] gi|321170173|gb|ADW75872.1| glutamate racemase [Rahnella sp. Y9602] Length = 293 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 129/220 (58%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL V ++R ++P+ H+IY D+V FPYG + + +R++ + + + + Sbjct: 28 TVLVFDSGVGGLSVYDEVRQMLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVAKR 87 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + VIACNTA T+ LR+ F S +G VPAIK AA T++G++ +L+T AT++R Sbjct: 88 HPLSIIVIACNTASTVSLPALRAKF-SCPVVGVVPAIKPAAKLTRNGVVGLLATRATVQR 146 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT +L+ + + C I ++ S L E G ++ +KK + +E D Sbjct: 147 PYTHDLVARFATDCQILMLGSAELVELAEAKLHGEEVSLAALKKILHPWLRLREPP--DT 204 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+PL+ Q+ P +D+ +IARRA L+ Sbjct: 205 VVLGCTHFPLLSQELSQVLPDGTRMIDSGSAIARRAHWLI 244 >gi|113968524|ref|YP_732317.1| glutamate racemase [Shewanella sp. MR-4] gi|122944227|sp|Q0HNV7|MURI_SHESM RecName: Full=Glutamate racemase gi|113883208|gb|ABI37260.1| glutamate racemase [Shewanella sp. MR-4] Length = 272 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 77/230 (33%), Positives = 125/230 (54%), Gaps = 5/230 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R L+P + + Y+ D+ PYG E+ L + L + Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHDYCYLFDNARLPYGELEEQELVSGCVALIDQV 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + CH+ L S L E+ ++ + + + Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQKIATGQLDMARLTQVLSPIVTAD---- 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGKGVTLLDSGEAIAKRVKTLLAETKSEQ 225 >gi|170022021|ref|YP_001726975.1| glutamate racemase [Escherichia coli ATCC 8739] gi|194438347|ref|ZP_03070438.1| glutamate racemase [Escherichia coli 101-1] gi|297521937|ref|ZP_06940323.1| glutamate racemase [Escherichia coli OP50] gi|300916976|ref|ZP_07133674.1| hypothetical protein HMPREF9540_00832 [Escherichia coli MS 115-1] gi|300928750|ref|ZP_07144266.1| hypothetical protein HMPREF9550_01102 [Escherichia coli MS 187-1] gi|300948244|ref|ZP_07162363.1| hypothetical protein HMPREF9541_01786 [Escherichia coli MS 116-1] gi|300954723|ref|ZP_07167157.1| hypothetical protein HMPREF9547_00648 [Escherichia coli MS 175-1] gi|301024176|ref|ZP_07187885.1| hypothetical protein HMPREF9551_02242 [Escherichia coli MS 196-1] gi|301645164|ref|ZP_07245121.1| hypothetical protein HMPREF9543_01787 [Escherichia coli MS 146-1] gi|312971739|ref|ZP_07785913.1| glutamate racemase [Escherichia coli 1827-70] gi|169756949|gb|ACA79648.1| glutamate racemase [Escherichia coli ATCC 8739] gi|194422784|gb|EDX38780.1| glutamate racemase [Escherichia coli 101-1] gi|299880535|gb|EFI88746.1| hypothetical protein HMPREF9551_02242 [Escherichia coli MS 196-1] gi|300318304|gb|EFJ68088.1| hypothetical protein HMPREF9547_00648 [Escherichia coli MS 175-1] gi|300415728|gb|EFJ99038.1| hypothetical protein HMPREF9540_00832 [Escherichia coli MS 115-1] gi|300452222|gb|EFK15842.1| hypothetical protein HMPREF9541_01786 [Escherichia coli MS 116-1] gi|300463275|gb|EFK26768.1| hypothetical protein HMPREF9550_01102 [Escherichia coli MS 187-1] gi|301076543|gb|EFK91349.1| hypothetical protein HMPREF9543_01787 [Escherichia coli MS 146-1] gi|310334116|gb|EFQ00321.1| glutamate racemase [Escherichia coli 1827-70] gi|315617764|gb|EFU98369.1| glutamate racemase [Escherichia coli 3431] Length = 262 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|187776066|ref|ZP_02800193.2| glutamate racemase [Escherichia coli O157:H7 str. EC4196] gi|188494268|ref|ZP_03001538.1| glutamate racemase [Escherichia coli 53638] gi|189010240|ref|ZP_02805903.2| glutamate racemase [Escherichia coli O157:H7 str. EC4076] gi|189402183|ref|ZP_02780670.2| glutamate racemase [Escherichia coli O157:H7 str. EC4401] gi|189403088|ref|ZP_02793288.2| glutamate racemase [Escherichia coli O157:H7 str. EC4486] gi|189404032|ref|ZP_02786646.2| glutamate racemase [Escherichia coli O157:H7 str. EC4501] gi|189404858|ref|ZP_02811842.2| glutamate racemase [Escherichia coli O157:H7 str. EC869] gi|208807428|ref|ZP_03249765.1| glutamate racemase [Escherichia coli O157:H7 str. EC4206] gi|208814014|ref|ZP_03255343.1| glutamate racemase [Escherichia coli O157:H7 str. EC4045] gi|208818359|ref|ZP_03258679.1| glutamate racemase [Escherichia coli O157:H7 str. EC4042] gi|209400751|ref|YP_002273491.1| glutamate racemase [Escherichia coli O157:H7 str. EC4115] gi|217325108|ref|ZP_03441192.1| glutamate racemase [Escherichia coli O157:H7 str. TW14588] gi|309783926|ref|ZP_07678571.1| glutamate racemase [Shigella dysenteriae 1617] gi|30043002|gb|AAP18724.1| glutamate racemase [Shigella flexneri 2a str. 2457T] gi|56384049|gb|AAN45478.2| glutamate racemase [Shigella flexneri 2a str. 301] gi|187769174|gb|EDU33018.1| glutamate racemase [Escherichia coli O157:H7 str. EC4196] gi|188489467|gb|EDU64570.1| glutamate racemase [Escherichia coli 53638] gi|189001518|gb|EDU70504.1| glutamate racemase [Escherichia coli O157:H7 str. EC4076] gi|189357222|gb|EDU75641.1| glutamate racemase [Escherichia coli O157:H7 str. EC4401] gi|189362690|gb|EDU81109.1| glutamate racemase [Escherichia coli O157:H7 str. EC4486] gi|189367934|gb|EDU86350.1| glutamate racemase [Escherichia coli O157:H7 str. EC4501] gi|189373225|gb|EDU91641.1| glutamate racemase [Escherichia coli O157:H7 str. EC869] gi|208727229|gb|EDZ76830.1| glutamate racemase [Escherichia coli O157:H7 str. EC4206] gi|208735291|gb|EDZ83978.1| glutamate racemase [Escherichia coli O157:H7 str. EC4045] gi|208738482|gb|EDZ86164.1| glutamate racemase [Escherichia coli O157:H7 str. EC4042] gi|209162151|gb|ACI39584.1| glutamate racemase [Escherichia coli O157:H7 str. EC4115] gi|217321329|gb|EEC29753.1| glutamate racemase [Escherichia coli O157:H7 str. TW14588] gi|308928297|gb|EFP73759.1| glutamate racemase [Shigella dysenteriae 1617] gi|313648865|gb|EFS13304.1| glutamate racemase [Shigella flexneri 2a str. 2457T] gi|320173014|gb|EFW48236.1| Glutamate racemase [Shigella dysenteriae CDC 74-1112] gi|320182828|gb|EFW57705.1| Glutamate racemase [Shigella flexneri CDC 796-83] gi|320190929|gb|EFW65579.1| Glutamate racemase [Escherichia coli O157:H7 str. EC1212] gi|323167446|gb|EFZ53154.1| glutamate racemase [Shigella sonnei 53G] gi|326338013|gb|EGD61843.1| Glutamate racemase [Escherichia coli O157:H7 str. 1044] gi|326342692|gb|EGD66465.1| Glutamate racemase [Escherichia coli O157:H7 str. 1125] gi|332088274|gb|EGI93394.1| glutamate racemase [Shigella boydii 3594-74] gi|332751534|gb|EGJ81933.1| glutamate racemase [Shigella flexneri 4343-70] gi|332751805|gb|EGJ82202.1| glutamate racemase [Shigella flexneri K-671] gi|332752573|gb|EGJ82959.1| glutamate racemase [Shigella flexneri 2747-71] gi|332764484|gb|EGJ94716.1| glutamate racemase [Shigella flexneri 2930-71] gi|332997949|gb|EGK17555.1| glutamate racemase [Shigella flexneri VA-6] gi|332998392|gb|EGK17990.1| glutamate racemase [Shigella flexneri K-272] gi|332998878|gb|EGK18472.1| glutamate racemase [Shigella flexneri K-218] gi|333014084|gb|EGK33441.1| glutamate racemase [Shigella flexneri K-227] Length = 262 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|50123157|ref|YP_052324.1| glutamate racemase [Pectobacterium atrosepticum SCRI1043] gi|81643623|sp|Q6CZB6|MURI_ERWCT RecName: Full=Glutamate racemase gi|49613683|emb|CAG77134.1| glutamate racemase [Pectobacterium atrosepticum SCRI1043] Length = 285 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 85/272 (31%), Positives = 142/272 (52%), Gaps = 4/272 (1%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 + ++ P + +IL+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + Sbjct: 11 ISLEAIPSNLPSRPTILVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + S + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++ Sbjct: 71 IERVVEIVSAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T AT++R YT LI + + C I + S L E G I E++K + Sbjct: 130 GVVGLLATRATVQRPYTHELITRFATDCQILSLGSSELVELAEAKLQGEAISISELQKIL 189 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E D +VL CTH+PL+ + + P +D+ +IA+R L+ ++ Sbjct: 190 RPWLRLTEPP--DTVVLGCTHFPLLAEELKMVLPEGTRLVDSGAAIAKRTAWLIANLDNP 247 Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + L P +A + ++Q +G S Sbjct: 248 PLSTDRNLVYCLKITPKVATLWPILQRYGFNS 279 >gi|332345964|gb|AEE59298.1| glutamate racemase MurI [Escherichia coli UMNK88] Length = 262 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|149186762|ref|ZP_01865073.1| Glutamate racemase [Erythrobacter sp. SD-21] gi|148829670|gb|EDL48110.1| Glutamate racemase [Erythrobacter sp. SD-21] Length = 264 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 118/219 (53%), Gaps = 1/219 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL VL ++R LMP+ IY AD G PYG + + R+ L + ++Y Sbjct: 7 ILLFDSGVGGLTVLAELRQLMPKAPVIYAADMAGLPYGTKTEAEVAARVAGLLGRMAERY 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P L IACNTA T+ +R + +G VPAIK AAA T++G I +L T AT+R+ Sbjct: 67 NPRLICIACNTASTIALGMVREVLET-PIVGTVPAIKPAAALTKTGTIGLLGTQATVRQG 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y +L + S + + L + E G + DE+ K G ++ G+ D + Sbjct: 126 YVDDLEREFASDKTLLRYGANDLVALGEHKLRGESVSVDEVAKAARGLVLQVGGEDLDTV 185 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VLACTH+PL+ R+ V ++ + IARR LL Sbjct: 186 VLACTHFPLLEPELREAFGKHVTFVHGAQGIARRIAHLL 224 >gi|283834735|ref|ZP_06354476.1| hypothetical protein CIT292_08958 [Citrobacter youngae ATCC 29220] gi|291069665|gb|EFE07774.1| hypothetical protein CIT292_08958 [Citrobacter youngae ATCC 29220] Length = 260 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 128/219 (58%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R+ Sbjct: 61 PLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S L E G + +E+++ + + + D + Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGETVSLEELRRILRPWL--RMSEPPDTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|183597279|ref|ZP_02958772.1| hypothetical protein PROSTU_00524 [Providencia stuartii ATCC 25827] gi|188023294|gb|EDU61334.1| hypothetical protein PROSTU_00524 [Providencia stuartii ATCC 25827] Length = 288 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 128/237 (54%), Gaps = 6/237 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL+FDSG+GGL V ++++ L+P H+IY D+ FPYG + + R+ L I Sbjct: 24 IRPTILVFDSGVGGLSVYREVKKLLPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQLVDVI 83 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 K+ +++IACNTA T+ LR+ F +G VPAIK A T++G++ +L+T T Sbjct: 84 AKKHPLTIAIIACNTASTVSLPNLRAHF-RFPVVGVVPAIKPATKLTRNGVVGLLATKGT 142 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI + + C + + S L E G +I DEI ++ + + Sbjct: 143 VNREYTKELIERFATDCKVLSLGSADLVQLAERKLHGEQIPLDEIANAVKPWL--RMPEP 200 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D ++L CTH+PL++ Q+ P ++D+ +IARRA L IN V D Sbjct: 201 PDTVILGCTHFPLLIEELEQVLPDGTRFIDSGAAIARRAVWL---INNQAEEVIDSQ 254 >gi|333014021|gb|EGK33381.1| glutamate racemase [Shigella flexneri K-304] Length = 265 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|317050042|ref|YP_004117690.1| glutamate racemase [Pantoea sp. At-9b] gi|316951659|gb|ADU71134.1| glutamate racemase [Pantoea sp. At-9b] Length = 284 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 127/223 (56%), Gaps = 3/223 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ ++L+FDSG+GGL V +++R L+P H++Y D+ GFPYG + + R++ + I Sbjct: 20 LRPTVLVFDSGVGGLSVYEEIRQLLPNLHYLYAFDNEGFPYGEKTETYIVDRVVSIVEAI 79 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + L VIACN+A T+ LR+ F +G VPAIK AA T++G++ +L+T T Sbjct: 80 TQHFPLALVVIACNSASTVSLPALRAKF-DFPVVGVVPAIKPAARLTRNGVVGLLATRGT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT L+ + +C I ++ S L E G ++ D++++ ++ KE Sbjct: 139 VKRPYTHELVAQFARECQIKMLGSAELVELAEAKLHGEEVLLDDVRRVVQPWLRMKEPP- 197 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+PL+ + + P +D+ +IARR LL Sbjct: 198 -DTVVLGCTHFPLLRDELQLVLPEGTRLVDSGAAIARRTAWLL 239 >gi|114327536|ref|YP_744693.1| glutamate racemase [Granulibacter bethesdensis CGDNIH1] gi|122327492|sp|Q0BTT2|MURI_GRABC RecName: Full=Glutamate racemase gi|114315710|gb|ABI61770.1| glutamate racemase [Granulibacter bethesdensis CGDNIH1] Length = 276 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 119/220 (54%), Gaps = 4/220 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 +K IL+FDSGIGGL V +R ++P YVAD GFPYG D AL R++ + Sbjct: 2 RKTDAHILVFDSGIGGLGVADCIRRMLPAATLGYVADTAGFPYGAMSDEALVTRVLTVLE 61 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + + +P + VIACNTA TL LRS + F+G VP +K AA+ + + I +L+TP Sbjct: 62 QAIARLRPDMVVIACNTASTLALSALRSRH-DLPFIGCVPPLKWAASVSATRQIGLLATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ R Y + L+ + C +H + LA E G + + ++ E+ I Sbjct: 121 ATVDRPYLTALMQEHGQGCTLHAHGARHLAGYAEAVFRGETVLVEAVRAELG---ILGMI 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D + L CTHY ++ RQ P PV WLD ++++AR+ Sbjct: 178 PDIDAVALGCTHYGRLLPWLRQAMPRPVAWLDPAEAVARQ 217 >gi|307545641|ref|YP_003898120.1| glutamate racemase [Halomonas elongata DSM 2581] gi|307217665|emb|CBV42935.1| glutamate racemase [Halomonas elongata DSM 2581] Length = 258 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 9/257 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSG+GGL V+ +R +PE Y D+ PYG ED L R++ + Sbjct: 1 MAGPILVFDSGVGGLSVVASLRRRLPEAALAYACDNAMLPYGMREDDWLVGRILEVCESA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + V+ACNTA TL + LR ++ +G VPAIK AA +++ I +L+T AT Sbjct: 61 VAASGCAGLVVACNTASTLALEALRERL-TVPVVGTVPAIKPAAGMSETRHIGLLATSAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI + C + +++ L + E + G + D +++ + + Sbjct: 120 VGRAYTLRLIREFAGDCRVTRIAADPLVTEAERWVAGERPDLDVLRRTLSPM---AQMPD 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PL+ + +P PV W+D+ D+IARRA ++ HQ R + Sbjct: 177 LDTMVLGCTHFPLLRDWLIEFAPRPVRWVDSGDAIARRAGQVM---ADHQRRRGSETGWV 233 Query: 252 LSGKPDIAMRRLMQGFG 268 + P A+ R + GFG Sbjct: 234 TA--PSEALSRGLSGFG 248 >gi|261868128|ref|YP_003256050.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413460|gb|ACX82831.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 275 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 138/259 (53%), Gaps = 7/259 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL FDSG+GG V +++ L+P+YH++Y D+ FPY + + +R + + I Sbjct: 8 TILFFDSGVGGFSVYHEVKQLLPDYHYLYCFDNAYFPYSEKPEEKIIERTLKICQRIDQM 67 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y L VIACNTA T++ LR F S+ +G VPAIK AAA T + I +L+T T+ R Sbjct: 68 YPLDLIVIACNTASTVVLPSLREHF-SIPIVGTVPAIKPAAAQTTTKHIGLLATKGTVNR 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y S+LI Y + C + + S L E G I +EIK E+ + D Sbjct: 127 KYLSDLIDKYAADCRVEKIGSTKLVELAERKFHGYPIDLNEIKSEVLTWVTMSD---LDC 183 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTH+PLI +Q P + ++D+ ++A+R LL + +++ ++ +F + Sbjct: 184 VVLGCTHFPLIKSEIQQCLPQVIYFIDSGAAVAKRVESLLSDVKV-RSKNQTNNQVFCTK 242 Query: 255 --KPDIAMRRLMQGFGLKS 271 P+ + L+Q G ++ Sbjct: 243 MISPEDGLPNLIQSLGFET 261 >gi|301023753|ref|ZP_07187492.1| hypothetical protein HMPREF9534_03554 [Escherichia coli MS 69-1] gi|300396897|gb|EFJ80435.1| hypothetical protein HMPREF9534_03554 [Escherichia coli MS 69-1] Length = 262 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIITAVQKRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|170680254|ref|YP_001746359.1| glutamate racemase [Escherichia coli SMS-3-5] gi|293407588|ref|ZP_06651507.1| glutamate racemase [Escherichia coli FVEC1412] gi|298383336|ref|ZP_06992929.1| glutamate racemase [Escherichia coli FVEC1302] gi|300896472|ref|ZP_07114999.1| hypothetical protein HMPREF9552_00793 [Escherichia coli MS 198-1] gi|170517972|gb|ACB16150.1| glutamate racemase [Escherichia coli SMS-3-5] gi|291425505|gb|EFE98544.1| glutamate racemase [Escherichia coli FVEC1412] gi|298276370|gb|EFI17890.1| glutamate racemase [Escherichia coli FVEC1302] gi|300359665|gb|EFJ75535.1| hypothetical protein HMPREF9552_00793 [Escherichia coli MS 198-1] Length = 262 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQKRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|170729028|ref|YP_001763054.1| glutamate racemase [Shewanella woodyi ATCC 51908] gi|229486277|sp|B1KN02|MURI_SHEWM RecName: Full=Glutamate racemase gi|169814375|gb|ACA88959.1| glutamate racemase [Shewanella woodyi ATCC 51908] Length = 266 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 85/265 (32%), Positives = 139/265 (52%), Gaps = 11/265 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSG+GGL +L ++R ++P+ ++ Y+ D+ PYG E+ L L + Sbjct: 1 MSGPILVFDSGVGGLSILDEIRRVLPDQNYCYLFDNARLPYGELEEQELIDGCEALITAT 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + L VIACNTA TL+ LR ++ +G VPAIK AA Y+Q+ I +L+TP T Sbjct: 61 VAQLGASLVVIACNTASTLVLPVLREAL-TIPVVGVVPAIKPAALYSQAKHIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R+YT +LI + + C + L S L E A G +I + EI + + + Sbjct: 120 IKRSYTHSLIQEFAANCQVELYGSSELVLLAERKASGKQILQGEIAQLLSPIKVSG---- 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--- 248 D +VL CTH+P++ +Q V LD+ ++A R L+ +T R H Sbjct: 176 IDTLVLGCTHFPILKDEIQQYLGDGVLLLDSGKAVAARVSTLIKEESTLNKRQRKGHSKE 235 Query: 249 --ALFLSGKPDIAMRRLMQGFGLKS 271 AL+ S + +++L+ FG + Sbjct: 236 MIALYTSEVGE-GLKKLLAEFGFST 259 >gi|261819555|ref|YP_003257661.1| glutamate racemase [Pectobacterium wasabiae WPP163] gi|261603568|gb|ACX86054.1| glutamate racemase [Pectobacterium wasabiae WPP163] Length = 285 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 84/272 (30%), Positives = 142/272 (52%), Gaps = 4/272 (1%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 + ++ P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + Sbjct: 11 ISLEAIPSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + S + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++ Sbjct: 71 IERVVEIVSAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T AT++R YT LI + + C I + S L E G I E++K + Sbjct: 130 GVVGLLATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQKIL 189 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E D +VL CTH+PL+ + P +D+ +IA+R L+ ++ Sbjct: 190 RPWLRLPEPP--DTVVLGCTHFPLLAEELKMALPEGTRLVDSGAAIAKRTAWLIANLDNP 247 Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + L+ P +A + ++Q +G S Sbjct: 248 PLSTDKNLVYCLTITPKVATLWPILQRYGFDS 279 >gi|254292511|ref|YP_003058534.1| glutamate racemase [Hirschia baltica ATCC 49814] gi|254041042|gb|ACT57837.1| glutamate racemase [Hirschia baltica ATCC 49814] Length = 265 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 128/242 (52%), Gaps = 4/242 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N +L+FDSG+GGL ++ +R +P+ Y AD FPYG D L+ RL L +++ Sbjct: 2 NRVLVFDSGVGGLSIVNSIREQIPDTIVDYAADAGFFPYGLKSDEELQARLPKLCKALIE 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K +P + V+ACNTA TL +R + +G VPAIK AA TQ+G I +L+TP T+R Sbjct: 62 KAKPDIFVMACNTASTLSLASVREIV-DIPVVGTVPAIKPAAEITQTGTIGVLATPGTIR 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R Y +L + + + + L E + G + +D I F EG+ D Sbjct: 121 RQYLDDLERQFAAHIKVVRHGTAGLVELAERHVRGEILSQDMFDNAISPLFSGAEGQNID 180 Query: 194 VIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 V+VLACTH+PLI ++ P + +D+ D+I R+ LL R ++ D + L Sbjct: 181 VVVLACTHFPLIRDQIQKACPAYVTKLIDSGDAIGRQVGRLLVR--EKSSKKSPDACVLL 238 Query: 253 SG 254 +G Sbjct: 239 TG 240 >gi|294634282|ref|ZP_06712824.1| glutamate racemase [Edwardsiella tarda ATCC 23685] gi|291092322|gb|EFE24883.1| glutamate racemase [Edwardsiella tarda ATCC 23685] Length = 260 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V Q+++ L+P+ H+IY D+ GFPYG E + +R++ + I ++ Sbjct: 1 MLVFDSGVGGLSVYQEIQALLPDLHYIYAFDNQGFPYGEKEAAFITERVLLIVEAIQRRH 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA T++ LR F S +G VPAIK AA T++G++ +L+T AT++R Sbjct: 61 TLSAMVVACNTASTIVLPALRERF-SFPVVGVVPAIKPAAKLTRNGIVGLLATRATVQRA 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT L+ + + C I ++ S L E G ++ ++ + E D + Sbjct: 120 YTHELVARFAADCQIKMLGSAELVEIAEAKLHGEAVELQRLRAILRPWLTMAEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR L+ Sbjct: 178 VLGCTHFPLLRAELAQVLPVGTRMVDSGAAIARRVAWLI 216 >gi|300721344|ref|YP_003710615.1| glutamate racemase [Xenorhabdus nematophila ATCC 19061] gi|297627832|emb|CBJ88367.1| glutamate racemase [Xenorhabdus nematophila ATCC 19061] Length = 287 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 81/225 (36%), Positives = 124/225 (55%), Gaps = 3/225 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + +IL+FDSG+GGL V +++R L+P+ H+IY D+ FPYG + R++ + Sbjct: 22 KTARPTILVFDSGVGGLSVYKEIRKLLPDLHYIYAFDNEAFPYGEKTADVIIDRVVKVVD 81 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 I K+ + VIACNTA T+ LR F S +G VPAIK AA + + ++ +L+T Sbjct: 82 AIQKKHPLAVVVIACNTASTVSLPVLRERF-SFPVVGVVPAIKPAAKLSCNRIVGLLATR 140 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ R YT LI + + C +H + S L E G + DE++K ++ KE Sbjct: 141 ATVNRGYTKELITRFATDCQVHSIGSAELVELAERKLHGKDVPLDELEKVLKPWLRMKEP 200 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTH+PLI Q+ P +D+ +IARR L+ Sbjct: 201 P--DTVILGCTHFPLIAEELSQVLPDGTRLIDSGAAIARRTAWLI 243 >gi|4511996|gb|AAD21556.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4] Length = 224 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 113/205 (55%), Gaps = 1/205 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL F+SG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L + Sbjct: 1 MSRPILFFNSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R+ Y +L + S C + S L + E G K + E++ + EG R Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDR 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWP 216 DV+VLACTH+PL+ +SP P Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPAP 204 >gi|323174290|gb|EFZ59916.1| glutamate racemase [Escherichia coli LT-68] Length = 262 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GG+ V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGVSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|227885282|ref|ZP_04003087.1| glutamate racemase [Escherichia coli 83972] gi|300975977|ref|ZP_07173249.1| hypothetical protein HMPREF9531_01194 [Escherichia coli MS 45-1] gi|301048608|ref|ZP_07195621.1| hypothetical protein HMPREF9549_02631 [Escherichia coli MS 185-1] gi|227837734|gb|EEJ48200.1| glutamate racemase [Escherichia coli 83972] gi|300299528|gb|EFJ55913.1| hypothetical protein HMPREF9549_02631 [Escherichia coli MS 185-1] gi|300410167|gb|EFJ93705.1| hypothetical protein HMPREF9531_01194 [Escherichia coli MS 45-1] gi|307556119|gb|ADN48894.1| glutamate racemase [Escherichia coli ABU 83972] gi|312948550|gb|ADR29377.1| glutamate racemase [Escherichia coli O83:H1 str. NRG 857C] gi|315292669|gb|EFU52021.1| hypothetical protein HMPREF9544_02904 [Escherichia coli MS 153-1] gi|320196758|gb|EFW71380.1| Glutamate racemase [Escherichia coli WV_060327] gi|323190167|gb|EFZ75445.1| glutamate racemase [Escherichia coli RN587/1] gi|324006695|gb|EGB75914.1| hypothetical protein HMPREF9532_03634 [Escherichia coli MS 57-2] gi|330908292|gb|EGH36811.1| glutamate racemase [Escherichia coli AA86] Length = 262 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|283787352|ref|YP_003367217.1| glutamate racemase [Citrobacter rodentium ICC168] gi|282950806|emb|CBG90482.1| glutamate racemase [Citrobacter rodentium ICC168] Length = 283 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 78/234 (33%), Positives = 129/234 (55%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNVAFPYGEKSEEFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + + L+VIACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQQRSPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ + Sbjct: 128 GIVGLLATRGTVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGKPVPLEELQRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + D +VL CTH+PL+ + P +D+ +IARR LL Sbjct: 188 RPWL--RMSEPPDTVVLGCTHFPLLKEELLHVLPEGTRLVDSGAAIARRTAWLL 239 >gi|191172716|ref|ZP_03034254.1| glutamate racemase [Escherichia coli F11] gi|300986811|ref|ZP_07177801.1| hypothetical protein HMPREF9553_03017 [Escherichia coli MS 200-1] gi|190907020|gb|EDV66621.1| glutamate racemase [Escherichia coli F11] gi|300306388|gb|EFJ60908.1| hypothetical protein HMPREF9553_03017 [Escherichia coli MS 200-1] gi|315289655|gb|EFU49048.1| hypothetical protein HMPREF9539_00329 [Escherichia coli MS 110-3] gi|324012464|gb|EGB81683.1| hypothetical protein HMPREF9533_03508 [Escherichia coli MS 60-1] Length = 262 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|251793125|ref|YP_003007853.1| glutamate racemase [Aggregatibacter aphrophilus NJ8700] gi|247534520|gb|ACS97766.1| glutamate racemase [Aggregatibacter aphrophilus NJ8700] Length = 300 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 88/237 (37%), Positives = 131/237 (55%), Gaps = 11/237 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L FDSG+GGL V Q+++ L+P+ H++Y D+ FPY + + +R + + I + Sbjct: 8 TLLFFDSGVGGLSVYQEVQKLLPDCHYLYCFDNAFFPYSEKPEEGIVERTLKICQCIDNM 67 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y L VIACNTA T++ LR F S+ +G VPAIK AA TQ+ I +L+T T++R Sbjct: 68 YPLDLIVIACNTASTVVLPVLRKHF-SIPIVGTVPAIKPAAEQTQTKHIGLLATKGTVKR 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRTD 193 Y S+LI Y S C + + S L E G I +EIK E+ E E D Sbjct: 127 QYLSDLIDKYASFCQVEKIGSTKLVELAEHKLHGYPIDLNEIKVELS----EWENIPDLD 182 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-----NTHQTRVF 245 V+VL CTH+PLI +Q P ++D+ +IA+R + LL + N ++VF Sbjct: 183 VVVLGCTHFPLIKSEIQQCLPQVKYFIDSGVAIAKRVKSLLKEVKVRLKNQMNSQVF 239 >gi|312965372|ref|ZP_07779605.1| glutamate racemase [Escherichia coli 2362-75] gi|312290046|gb|EFR17933.1| glutamate racemase [Escherichia coli 2362-75] Length = 262 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 124/219 (56%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQKRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANACQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|146294088|ref|YP_001184512.1| glutamate racemase [Shewanella putrefaciens CN-32] gi|145565778|gb|ABP76713.1| glutamate racemase [Shewanella putrefaciens CN-32] Length = 270 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 1/223 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T Sbjct: 61 SSLTQPDIIVIACNTASTIALDLLRTEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Y LI ++ ++C + + S +L E+ G D + +EI+ F + + Sbjct: 120 VNSAYVKMLITNFATECKVLVEDSEVLVLASEQKLLGNGFDPDIVTQEIQRIFSKPDAFN 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 TDV+VLACTH+PLI + P V +D+ +IA R LL Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLL 222 >gi|237809706|ref|YP_002894146.1| glutamate racemase [Tolumonas auensis DSM 9187] gi|237501967|gb|ACQ94560.1| glutamate racemase [Tolumonas auensis DSM 9187] Length = 274 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 124/224 (55%), Gaps = 4/224 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 ++ +IL+FDSG+GGL + Q++R +P + + YV D+ FPYG +H + R L Sbjct: 10 RINVNILLFDSGMGGLSIYQEVRRRLPGHRYDYVFDNAFFPYGEQPEHIITARCCLLIEH 69 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + Q L VIACNTA T++ LR ++ +G VPAIK AAA T++G I +L+TPA Sbjct: 70 LVSERQIDLVVIACNTASTIVLPALRERL-AIPVVGVVPAIKPAAALTRNGSIGLLATPA 128 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++R YTS LI + + C + + L + E G + E I ++ Sbjct: 129 TVQRPYTSQLIAQFATHCQVLKLGVTELVVQAERKMAGYDVDEQAIHLALQPLL--THAM 186 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+PL+ ++ P + +D+ +IA+R LL Sbjct: 187 PPDTLVLGCTHFPLLKEEICRIMPG-IQLVDSGAAIAKRVAALL 229 >gi|187732533|ref|YP_001882660.1| glutamate racemase [Shigella boydii CDC 3083-94] gi|187429525|gb|ACD08799.1| glutamate racemase [Shigella boydii CDC 3083-94] Length = 262 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T + ++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANSIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G + D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|293391663|ref|ZP_06635997.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952197|gb|EFE02316.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 275 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/261 (31%), Positives = 141/261 (54%), Gaps = 7/261 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +++IL FDSG+GGL V ++++ L+P +H++Y D+ FPY + + +R + + I Sbjct: 6 KSTILFFDSGVGGLSVYREVKQLLPNHHYLYCFDNAYFPYSEKPEEKIIERTLKICQRID 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y L VIACNTA T++ LR F S+ +G VPAIK AA + + I +L+T T+ Sbjct: 66 QMYPLDLIVIACNTASTVVLPSLREHF-SIPIVGTVPAIKPAAEQSMTKHIGLLATKGTV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R Y S+LI Y + C + + S L E G I +EIK E+ + Sbjct: 125 KRKYLSDLIDKYAADCRVEKIGSTKLVELAERKLHGYPIDLNEIKSEVLTWVTMSD---L 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTH+PLI +Q P + ++D+ ++A+R LL + +++ ++ +F Sbjct: 182 DCVVLGCTHFPLIKSEIQQCLPQVIYFIDSGAAVAKRVESLLSDVKV-RSKNQTNNQVFC 240 Query: 253 SG--KPDIAMRRLMQGFGLKS 271 + P+ + L+Q G ++ Sbjct: 241 TKMISPEDGLPNLIQSLGFET 261 >gi|26250744|ref|NP_756784.1| glutamate racemase [Escherichia coli CFT073] gi|26111175|gb|AAN83358.1|AE016770_158 Glutamate racemase [Escherichia coli CFT073] Length = 285 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 126/220 (57%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+G L V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++ Sbjct: 23 TVLVFDSGVGXLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQER 82 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R Sbjct: 83 YPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKR 141 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT LI + ++C I ++ S + E G + D +K+ + KE D Sbjct: 142 SYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DT 199 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 200 VVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239 >gi|117620688|ref|YP_854602.1| glutamate racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562095|gb|ABK39043.1| glutamate racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 264 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 141/260 (54%), Gaps = 7/260 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL + +++R +P +++ Y D+ FPYG + AL + L S ++ + Sbjct: 3 NILVFDSGMGGLTIYREIRRALPAHNYFYCFDNANFPYGELSEAALTEVCTRLVSHMVVE 62 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + L VIACNTA T+ LR+ ++ +G VPAIK AAA T++G I +L+TP T+ R Sbjct: 63 HDIDLVVIACNTASTIALPSLRAAM-TVPVVGVVPAIKPAAALTRNGCIGLLATPGTVSR 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + + L + L E G+ + + +E+ ++E E + D Sbjct: 122 EYTHELIAQFAPGKRVLLKGATELVVEAEHKLAGLPVNM-ALLREVLADWLEGE-EHPDT 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTH+PL+ RQL P +D+ ++A+R LL + T TR+ D Sbjct: 180 LVLGCTHFPLLDEEIRQLMP-ACQLVDSGSAVAKRVAHLLAGLVTTPTRLEDVGGKAYCT 238 Query: 255 KPDIAMRRL---MQGFGLKS 271 + D ++L +Q +GL S Sbjct: 239 RLDAQTQKLTAPLQAWGLSS 258 >gi|227329569|ref|ZP_03833593.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 285 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 4/266 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + +IL+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++ Sbjct: 17 PSNLPSRPTILVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L Sbjct: 77 IVNAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT++R YT LI + + C I + S L E G I E++K + Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAESKLQGETISISELQKILRPWLRL 195 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 E D +VL CTH+PL+ + P +D+ +IA+R L+ ++ Sbjct: 196 PEPP--DTVVLGCTHFPLLAEELKMALPDGTRLVDSGAAIAKRTAWLIANLDNPPLSTDK 253 Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271 + L+ P +A + ++Q +G S Sbjct: 254 NLVYCLAITPKVATLWPILQRYGFDS 279 >gi|150261128|ref|ZP_01917856.1| putative glutamate racemase [Yersinia pestis CA88-4125] gi|153947950|ref|YP_001399143.1| glutamate racemase [Yersinia pseudotuberculosis IP 31758] gi|161484906|ref|NP_667666.2| glutamate racemase [Yersinia pestis KIM 10] gi|161511329|ref|NP_994432.2| glutamate racemase [Yersinia pestis biovar Microtus str. 91001] gi|162100189|ref|YP_650027.2| glutamate racemase [Yersinia pestis Antiqua] gi|162139457|ref|YP_645991.2| glutamate racemase [Yersinia pestis Nepal516] gi|162202299|ref|YP_001164844.2| glutamate racemase [Yersinia pestis Pestoides F] gi|218930909|ref|YP_002348784.1| glutamate racemase [Yersinia pestis CO92] gi|229839605|ref|ZP_04459764.1| glutamate racemase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841690|ref|ZP_04461846.1| glutamate racemase [Yersinia pestis biovar Orientalis str. India 195] gi|229896694|ref|ZP_04511859.1| glutamate racemase [Yersinia pestis Pestoides A] gi|229904756|ref|ZP_04519867.1| glutamate racemase [Yersinia pestis Nepal516] gi|20177979|sp|Q8ZAA2|MURI_YERPE RecName: Full=Glutamate racemase gi|167017322|sp|A7FD15|MURI_YERP3 RecName: Full=Glutamate racemase gi|115349520|emb|CAL22494.1| putative glutamate racemase [Yersinia pestis CO92] gi|149290536|gb|EDM40613.1| putative glutamate racemase [Yersinia pestis CA88-4125] gi|152959445|gb|ABS46906.1| glutamate racemase [Yersinia pseudotuberculosis IP 31758] gi|229678874|gb|EEO74979.1| glutamate racemase [Yersinia pestis Nepal516] gi|229691029|gb|EEO83082.1| glutamate racemase [Yersinia pestis biovar Orientalis str. India 195] gi|229695971|gb|EEO86018.1| glutamate racemase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700301|gb|EEO88335.1| glutamate racemase [Yersinia pestis Pestoides A] gi|320013493|gb|ADV97064.1| glutamate racemase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 287 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + + + + Sbjct: 27 TALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQR 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+ Sbjct: 87 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 145 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT +LI + + C I L+ S L E G + + +KK + +E D Sbjct: 146 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 203 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 IVL CTH+PL+ Q+ P +D+ +IARR L+ Sbjct: 204 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 243 >gi|315633799|ref|ZP_07889089.1| glutamate racemase [Aggregatibacter segnis ATCC 33393] gi|315477841|gb|EFU68583.1| glutamate racemase [Aggregatibacter segnis ATCC 33393] Length = 278 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 88/238 (36%), Positives = 133/238 (55%), Gaps = 13/238 (5%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL FDSG+GGL V Q+++ L+P+YH++Y D+ FPY + + +R + + I +K Sbjct: 8 TILFFDSGVGGLSVYQEVKQLLPDYHYLYCFDNAYFPYSEKPEEGIVERTLKICQRI-EK 66 Query: 75 YQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 P+ L VIACNTA T++ LR F S+ +G VPAIK AA T++ I +L+T T++ Sbjct: 67 LCPLDLIVIACNTASTVVLPVLRKHF-SIPIVGTVPAIKPAAEQTKTKHIGLLATKGTVK 125 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRT 192 R Y S+LI Y S C + + S L E G I +EIK E+ E E Sbjct: 126 RQYLSDLIDKYASFCQVEKIGSTKLVELAEHKLHGYPIDLNEIKAELS----EWENIPDL 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-----NTHQTRVF 245 D +VL CTH+PL+ +Q P ++D+ +IA+R + LL + N ++VF Sbjct: 182 DAVVLGCTHFPLLKSEIQQCLPQVKYFIDSGAAIAKRVKSLLKDVKVRSKNQMNSQVF 239 >gi|317494788|ref|ZP_07953200.1| glutamate racemase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917390|gb|EFV38737.1| glutamate racemase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 286 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 126/220 (57%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG ++ + +R++ +++ + Sbjct: 27 TALVFDSGVGGLSVYQEIRSLLPDLHYIYAFDNQGFPYGEKDEAFIIERVVKTVAEVQKR 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + +IACNTA T+ LR F S +G VPAIK AA T++G++ +L+T AT++R Sbjct: 87 HPLSIVIIACNTASTITLPALRERF-SFPIVGVVPAIKPAAKLTRNGVVGLLATKATVQR 145 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT +LI + + C I ++ S L E G I +KK + E D Sbjct: 146 SYTHDLIARFATDCDIKMLGSSELVVLAEAKLHGEVIDHAVLKKILRPWLSMAEPP--DT 203 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+PL+ + P +D+ +IARR L+ Sbjct: 204 VVLGCTHFPLLREELAAVLPDGTRLVDSGAAIARRVAWLI 243 >gi|260774782|ref|ZP_05883684.1| glutamate racemase [Vibrio coralliilyticus ATCC BAA-450] gi|260609207|gb|EEX35362.1| glutamate racemase [Vibrio coralliilyticus ATCC BAA-450] Length = 263 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 135/259 (52%), Gaps = 11/259 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 LQ+ +LIFDSG+GGL V Q++ +P+ ++Y+ D+ +PYG + L R+ L S Sbjct: 3 LQSKVLIFDSGVGGLSVFQEIEKKLPQLDYVYLFDNAAYPYGELDHETLVSRVEALVSQY 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + +Q L VIACNTA T++ LR T S+ +G VPAIK A+ + +++TPAT Sbjct: 63 VADHQVDLVVIACNTASTIVLPSLR-TLLSIPVVGVVPAIKPASNLANKA-VGLIATPAT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI + + L+ S L EE G + E+K + + Sbjct: 121 VTRQYTQELIRDFSQSKPVELLGSTRLVDMAEEKLRGTPVSNQELKAVLSPMI-----GK 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV VL CTH+PLI + + V +D+ ++IARR + LL + + + + +F Sbjct: 176 VDVAVLGCTHFPLIKEEIQSVLSEQVVLVDSGEAIARRVQELLNLEDKKEGKGLRE--IF 233 Query: 252 LSGKP--DIAMRRLMQGFG 268 + P + A+ R +Q G Sbjct: 234 STAPPYAEGALNRALQNLG 252 >gi|108773872|gb|ABG16391.1| glutamate racemase [Yersinia pestis Nepal516] gi|108778024|gb|ABG12082.1| glutamate racemase [Yersinia pestis Antiqua] gi|145212464|gb|ABP41871.1| glutamate racemase [Yersinia pestis Pestoides F] Length = 291 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + + + + Sbjct: 31 TALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQR 90 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+ Sbjct: 91 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 149 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT +LI + + C I L+ S L E G + + +KK + +E D Sbjct: 150 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 207 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 IVL CTH+PL+ Q+ P +D+ +IARR L+ Sbjct: 208 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 247 >gi|222035687|emb|CAP78432.1| glutamate racemase [Escherichia coli LF82] Length = 260 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYPL 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+YT Sbjct: 61 ALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYT 119 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 LI + ++C I ++ S + E G + D +K+ + KE D +VL Sbjct: 120 HELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVVL 177 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 GCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 214 >gi|21957008|gb|AAM83917.1|AE013632_5 glutamate racemase [Yersinia pestis KIM 10] gi|45437760|gb|AAS63309.1| putative glutamate racemase [Yersinia pestis biovar Microtus str. 91001] Length = 299 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + + + + Sbjct: 39 TALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQR 98 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+ Sbjct: 99 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 157 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT +LI + + C I L+ S L E G + + +KK + +E D Sbjct: 158 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 215 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 IVL CTH+PL+ Q+ P +D+ +IARR L+ Sbjct: 216 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 255 >gi|120597779|ref|YP_962353.1| glutamate racemase [Shewanella sp. W3-18-1] gi|120557872|gb|ABM23799.1| glutamate racemase [Shewanella sp. W3-18-1] Length = 270 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 3/231 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T Sbjct: 61 SSLTQPDIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Y LI ++ ++C + + S L E+ G D + +EI+ F + + Sbjct: 120 VNSAYVKMLITNFATECKVLVEDSEALVLASEQKLLGNGFDPDIVTQEIQRIFSKPDAFN 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 TDV+VLACTH+PLI + P V +D+ +IA R LL +I HQT Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLL-KIE-HQT 228 >gi|146313651|ref|YP_001178725.1| glutamate racemase [Enterobacter sp. 638] gi|145320527|gb|ABP62674.1| glutamate racemase [Enterobacter sp. 638] Length = 283 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 134/234 (57%), Gaps = 7/234 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEDFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+VIACNTA T+ LR FP +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQARYPLALAVIACNTASTVSLPSLREKFP-FPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ I Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECKIAMLGSAELVEMAEAKLHGEPVSLEELRR-I 186 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 G ++ + + D +VL CTH+PL+ ++ P +D+ +IARR LL Sbjct: 187 LGPWL-RMAEPPDTVVLGCTHFPLLQEELLEVLPEGTRLVDSGAAIARRTAWLL 239 >gi|170026279|ref|YP_001722784.1| glutamate racemase [Yersinia pseudotuberculosis YPIII] gi|229486286|sp|B1JQ44|MURI_YERPY RecName: Full=Glutamate racemase gi|169752813|gb|ACA70331.1| glutamate racemase [Yersinia pseudotuberculosis YPIII] Length = 287 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 123/220 (55%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ + + + + Sbjct: 27 TALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQR 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+ Sbjct: 87 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 145 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT +LI + + C I L+ S L E G + + +KK + +E D Sbjct: 146 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 203 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 IVL CTH+PL+ Q+ P +D+ +IARR L+ Sbjct: 204 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 243 >gi|156972605|ref|YP_001443512.1| glutamate racemase [Vibrio harveyi ATCC BAA-1116] gi|166231065|sp|A7MXD3|MURI_VIBHB RecName: Full=Glutamate racemase gi|156524199|gb|ABU69285.1| hypothetical protein VIBHAR_00256 [Vibrio harveyi ATCC BAA-1116] Length = 268 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 131/245 (53%), Gaps = 9/245 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P ++Y+ D+ +PYG + L R+ L + ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPHMDYLYLFDNEAYPYGELDQDVLITRVNKLVAALV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA T++ LR+ S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 EEHQADIVVIACNTASTIVLPSLRANL-SIPVVGVVPAIKPASLLASQG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKR 191 R YT LI + + L+ S L EE K++ + I E+E + K Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEE-----KLRGESISLSELESILLPLRNK- 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV VL CTH+PLI Q V +D+ ++IARR + LL ++R ++ Sbjct: 178 VDVAVLGCTHFPLIKEEIHQALGGEVTLVDSGEAIARRVKALLLNAMKQESREEGSKKIY 237 Query: 252 LSGKP 256 S P Sbjct: 238 ASAPP 242 >gi|157147233|ref|YP_001454552.1| glutamate racemase [Citrobacter koseri ATCC BAA-895] gi|157084438|gb|ABV14116.1| hypothetical protein CKO_03024 [Citrobacter koseri ATCC BAA-895] Length = 260 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPNLHYIYAFDNVAFPYGEKSEAFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S L E G + +E+++ + + + D + Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGEPVSLEELRRILRPWL--RMPEPPDTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216 >gi|253686599|ref|YP_003015789.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259509917|sp|C6DHQ3|MURI_PECCP RecName: Full=Glutamate racemase gi|251753177|gb|ACT11253.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 285 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 4/266 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++ Sbjct: 17 PSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L Sbjct: 77 IVNAVQLRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT++R YT LI + + C I + S L E G I E++K + Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQKILRPWLRL 195 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 E D +VL CTH+PL+ + P +D+ +IARR L+ ++ Sbjct: 196 PEPP--DTVVLGCTHFPLLAEELKAALPDGTRLVDSGAAIARRTAWLIANLDNPPLSTDK 253 Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271 + L+ P +A + ++Q +G S Sbjct: 254 NLVYCLAITPKVATLWPILQRYGFDS 279 >gi|319427429|gb|ADV55503.1| glutamate racemase [Shewanella putrefaciens 200] Length = 270 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 3/231 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILEVISKA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T Sbjct: 61 NSLTQPDIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Y LI ++ ++C + + S +L E+ G + + +E++ F + + Sbjct: 120 VNSAYVKMLITNFATECKVLIEDSEVLVLASEQKLLGNGFDPNIVTQEVQRIFSKPDAFN 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 TDV+VLACTH+PLI + P V +D+ +IA R LL +I HQT Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLL-KIE-HQT 228 >gi|186893477|ref|YP_001870589.1| glutamate racemase [Yersinia pseudotuberculosis PB1/+] gi|229486285|sp|B2JZF9|MURI_YERPB RecName: Full=Glutamate racemase gi|186696503|gb|ACC87132.1| glutamate racemase [Yersinia pseudotuberculosis PB1/+] Length = 287 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ + + + Sbjct: 27 TALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQS 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+ Sbjct: 87 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 145 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT +LI + + C I L+ S L E G + + +KK + +E D Sbjct: 146 SYTLDLIARFATDCKIELLGSSELVEAAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 203 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 IVL CTH+PL+ Q+ P +D+ +IARR L+ Sbjct: 204 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 243 >gi|332288965|ref|YP_004419817.1| glutamate racemase [Gallibacterium anatis UMN179] gi|330431861|gb|AEC16920.1| glutamate racemase [Gallibacterium anatis UMN179] Length = 262 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 83/242 (34%), Positives = 125/242 (51%), Gaps = 8/242 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL FDSG+GGL V ++++ L+P YH++Y D+ FPY L++R + + I Sbjct: 6 TILFFDSGVGGLSVYREVKALLPNYHYLYCLDNACFPYSEKPGKLLEQRCVEICQKIATN 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Q L VIACNTA T++ +R+ F + +G VPAIK AA TQ+ +I +L+T T+ R Sbjct: 66 QQIDLIVIACNTASTIVLPAMRAAF-NCPIVGTVPAIKPAAEKTQTKVIGLLATKGTITR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y +LI Y C + + S L E+ G KI I + + E E D Sbjct: 125 PYVDDLIQQYAKNCEVKRLGSTELVEIAEQKLHGKKIDHLAIMRAVAEWRYEYE---MDT 181 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTH+PL+ + P ++D+ +IARR + LL QT +D + Sbjct: 182 VVLGCTHFPLLKSELKACLPQVSFFIDSGKAIARRVQSLL----LSQTTTSNDKQIAYCT 237 Query: 255 KP 256 P Sbjct: 238 AP 239 >gi|260913044|ref|ZP_05919526.1| glutamate racemase [Pasteurella dagmatis ATCC 43325] gi|260632631|gb|EEX50800.1| glutamate racemase [Pasteurella dagmatis ATCC 43325] Length = 269 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 83/260 (31%), Positives = 144/260 (55%), Gaps = 7/260 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +IL FDSG+GG V ++ + L+P H++Y D+ FPY + + +R++ + DI Sbjct: 6 QPTILFFDSGMGGFSVYKETKQLLPNCHYLYCFDNAFFPYSEKTEKKIIERVLMICQDIN 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 KY L VIACNTA T++ LR+ F S+ +G VPAIK AA ++++ I +L+T T+ Sbjct: 66 SKYPLDLIVIACNTASTVVLPSLRAHF-SIPIVGTVPAIKPAAEHSETKHIGLLATKGTV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R+Y +NLI Y C + + S L E+ G + +K+E++ + + Sbjct: 125 KRSYVANLISQYAGDCIVEKIGSTKLVEIAEQKLHGKAVDLVALKEELK---LWENIVDL 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV+VL CTH+PLI P ++D+ +IA R + LL +I +++ + + +F Sbjct: 182 DVVVLGCTHFPLIKEEIEWCLPQVRLFIDSGKAIALRVKHLLSKIEV-RSKKMEKNLIFC 240 Query: 253 SGKPD--IAMRRLMQGFGLK 270 + D + +R++ +G + Sbjct: 241 TQSFDDEVDFQRVLNFWGFE 260 >gi|212712479|ref|ZP_03320607.1| hypothetical protein PROVALCAL_03574 [Providencia alcalifaciens DSM 30120] gi|212684695|gb|EEB44223.1| hypothetical protein PROVALCAL_03574 [Providencia alcalifaciens DSM 30120] Length = 258 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 83/259 (32%), Positives = 136/259 (52%), Gaps = 12/259 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V ++++ L+P H+IY D+ FPYG + + R+ + + I K+ Sbjct: 1 MFDSGVGGLSVYREVKKLIPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQIVNAIAKKHPL 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 ++VIACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+ R YT Sbjct: 61 TIAVIACNTASTVSLPNLRAHF-TFPIVGVVPAIKPATKLTRNGVVGLLATKGTVNREYT 119 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 LI + + C + + S L E G + DEI + ++ KE D ++L Sbjct: 120 KELIERFATDCKVISLGSAELVQLAERKLHGEMLPLDEIAQAVKPWLKMKEAP--DTVIL 177 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-----LFL 252 CTH+PLIV ++ P ++D+ +IARR L+ +Q V D + L Sbjct: 178 GCTHFPLIVEELEKVLPNGTRFIDSGAAIARRTVWLI----NNQAEVTDSNEEDFAYCLL 233 Query: 253 SGKPDIAMRRLMQGFGLKS 271 + +R +++ G KS Sbjct: 234 MNESLQELRPVLEAEGFKS 252 >gi|51594484|ref|YP_068675.1| glutamate racemase [Yersinia pseudotuberculosis IP 32953] gi|81640781|sp|Q66G56|MURI_YERPS RecName: Full=Glutamate racemase gi|51587766|emb|CAH19366.1| putative glutamate racemase [Yersinia pseudotuberculosis IP 32953] Length = 287 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ + + + Sbjct: 27 TALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQS 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+ Sbjct: 87 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 145 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT +LI + + C I L+ S L E G + + +KK + +E D Sbjct: 146 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 203 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 IVL CTH+PL+ Q+ P +D+ +IARR L+ Sbjct: 204 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 243 >gi|94497599|ref|ZP_01304168.1| Glutamate racemase [Sphingomonas sp. SKA58] gi|94423016|gb|EAT08048.1| Glutamate racemase [Sphingomonas sp. SKA58] Length = 279 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 115/214 (53%), Gaps = 1/214 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL FDSG+GGL +L +R ++P +Y AD GFPYG + + R+ L ++++Y Sbjct: 21 ILFFDSGVGGLSILAPVRDMLPTASIVYAADSAGFPYGTKSEAEIAARVPALLGRLVERY 80 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P L+VIACNTA T+ +R+ + +G VPAIK AA +++ + +L T AT+R+ Sbjct: 81 RPRLAVIACNTASTIALQHVRAAL-DIPVVGTVPAIKPAALLSKNRIFGVLGTDATVRQP 139 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y L + + C + S L E G + + + G + G+R D++ Sbjct: 140 YVDRLAAEHGADCIVLRHGSAALVQLAEAKLRGEPLDPRVARAALAGLTTQPGGQRMDMV 199 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VLACTH+PL+ +P + ++ D IARR Sbjct: 200 VLACTHFPLVEAELAAAAPHSLGFVHGGDGIARR 233 >gi|242241176|ref|YP_002989357.1| glutamate racemase [Dickeya dadantii Ech703] gi|242133233|gb|ACS87535.1| glutamate racemase [Dickeya dadantii Ech703] Length = 295 Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 130/221 (58%), Gaps = 5/221 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 S+LIFDSG+GGL V +++R L+P+ H+IY D+ FPYG + + +R++ + D ++K Sbjct: 25 SVLIFDSGVGGLSVYEEIRKLLPDLHYIYTFDNEAFPYGEKPEQFIIERVVSIV-DAVEK 83 Query: 75 YQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 P+ + VIACNTA T+ LR+ F + +G VPAIK AA T++G++ +L+T AT++ Sbjct: 84 QHPLSAVVIACNTASTISLPALRARF-NFPVVGVVPAIKPAAKLTRNGVVGLLATRATVQ 142 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT LI + C I + S L E G ++ D ++K ++ K + D Sbjct: 143 RPYTHELISRFAHDCTILSLGSSELVEWGEAKLQGDEVPIDALRKILKPWL--KLPEPPD 200 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+PL+ + +Q P +D+ +IARR L+ Sbjct: 201 TVVLGCTHFPLLANELQQALPEGTRLVDSGAAIARRTAWLV 241 >gi|152978530|ref|YP_001344159.1| glutamate racemase [Actinobacillus succinogenes 130Z] gi|150840253|gb|ABR74224.1| glutamate racemase [Actinobacillus succinogenes 130Z] Length = 264 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 127/223 (56%), Gaps = 4/223 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL FDSG+GG V +++ L+P+ H++Y D+ FPY + L +R+ + + I Sbjct: 1 MKPTILFFDSGVGGFSVYSEVKSLLPDCHYLYCFDNAFFPYSERSEETLIERVSKICTTI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +Y L VIACNTA T++ LR TF S+ +G VPAIK AA+ + + I +L+T T Sbjct: 61 DIRYPLDLIVIACNTASTVVLPSLRRTF-SIPIVGTVPAIKPAASVSHTKHIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R Y + LI Y + C + + S +L E+ G + +++KE++ K+ Sbjct: 120 VKREYVNTLIARYATDCRVERLGSTVLPEIAEQKIKGNSVDLLQLRKELQAWICLKD--- 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTH+PLI R P +LD+ +IA+R + LL Sbjct: 177 LDTVILGCTHFPLIKEEIRICLPQVKFFLDSGYAIAKRVKSLL 219 >gi|260771658|ref|ZP_05880578.1| glutamate racemase [Vibrio metschnikovii CIP 69.14] gi|260613435|gb|EEX38634.1| glutamate racemase [Vibrio metschnikovii CIP 69.14] Length = 269 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 88/251 (35%), Positives = 136/251 (54%), Gaps = 15/251 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +++L + +LIFDSG+GGL V Q++ L+P+ + Y+ D+ +PYG L R+ L Sbjct: 2 QQQLSHKVLIFDSGVGGLSVYQEIVSLLPQLDYTYLFDNAAYPYGELAQEVLLNRVERLI 61 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 ++ + L VIACNTA T++ LR+ S+ +G VPAIK A+ I +++T Sbjct: 62 ISLVKQQSFDLVVIACNTASTIVLPMLRAKL-SIPVVGVVPAIKPASLVAHKA-IGLIAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 PAT+ R YT +LI ++ S+ + L+ S L EE K++ E+ KE + Sbjct: 120 PATITRQYTHDLIRNFSSKKSVELLGSTRLVDMAEE-----KLRGQEVDKEELATILSPL 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245 +R DV VL CTH+PLI +Q+ V +D+ +IARR + LL P + HQ Sbjct: 175 IQRIDVAVLGCTHFPLIKAEIQQVLGDDVMLIDSGQAIARRVQQLLDVEPGLK-HQ---- 229 Query: 246 DDHALFLSGKP 256 H +F S P Sbjct: 230 HPHTIFASAPP 240 >gi|227113199|ref|ZP_03826855.1| glutamate racemase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 285 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/266 (30%), Positives = 139/266 (52%), Gaps = 4/266 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++ Sbjct: 17 PSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L Sbjct: 77 IVNAVQLRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT++R YT LI + + C I + S L E G I E+++ + Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQRILRPWLRL 195 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 E D +VL CTH+PL+ + P +D+ +IA+R L+ ++ Sbjct: 196 PEPP--DTVVLGCTHFPLLAEELKMALPDGTRLVDSGSAIAKRTAWLIANLDNPPLSTDK 253 Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271 + L+ P +A + ++Q +G S Sbjct: 254 NLVYCLTITPKVATLWPILQRYGFDS 279 >gi|170769670|ref|ZP_02904123.1| glutamate racemase [Escherichia albertii TW07627] gi|170121478|gb|EDS90409.1| glutamate racemase [Escherichia albertii TW07627] Length = 262 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 141/257 (54%), Gaps = 4/257 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V +++R L+P+ H+IY D+V FPYG + + +R++ + + + + Y Sbjct: 1 MLVFDSGVGGLSVYEEIRRLLPDLHYIYAFDNVAFPYGEKSEEFVVERVVEIVTAVQEHY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S + E G I D +K+ + KE D + Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDISLDALKRILRPWLRMKEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PL+ Q+ P +D+ +IARR LL + A ++ Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPEAKSADANIAFCMAMT 237 Query: 256 PDIA-MRRLMQGFGLKS 271 P+ + ++Q +G K+ Sbjct: 238 PEAEQLLPVLQRYGFKT 254 >gi|307246771|ref|ZP_07528839.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255755|ref|ZP_07537558.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260207|ref|ZP_07541916.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852346|gb|EFM84583.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861315|gb|EFM93306.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865752|gb|EFM97631.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 267 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 8/262 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAIKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y + LI Y C + + + L VEE + +D + K + E + Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVA----EWQTHP 175 Query: 192 T-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 T D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ Sbjct: 176 TLDTVILGCTHFPLVKQELQQLLPKVKFFIDPGNGIANRVATLLSEFSLENSAQNKENIA 235 Query: 251 FLSGKPDIAMRR--LMQGFGLK 270 F + + +R +MQ +G K Sbjct: 236 FCTKMDEEFSKREIIMQQWGFK 257 >gi|262392932|ref|YP_003284786.1| glutamate racemase [Vibrio sp. Ex25] gi|262336526|gb|ACY50321.1| glutamate racemase [Vibrio sp. Ex25] Length = 267 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 121/222 (54%), Gaps = 7/222 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLISRVNQLVSSLV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + L+ S L EE G + DE+ K + + Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGNSVSLDELTK-----ILLPLRDKV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV VL CTH+PLI Q V +D+ +IARR + LL Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGEDVTLIDSGAAIARRVKALL 220 >gi|83647752|ref|YP_436187.1| glutamate racemase [Hahella chejuensis KCTC 2396] gi|83635795|gb|ABC31762.1| glutamate racemase [Hahella chejuensis KCTC 2396] Length = 271 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 130/256 (50%), Gaps = 7/256 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 LI DSG GGL + +R P +Y+AD +PYG+ + ++ R+ + + + Y Sbjct: 16 LIIDSGSGGLSIWGHIRRHTPWLPTLYLADFGFYPYGDKSEQEIETRVRHIVEQVCECYP 75 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L V+ACNTA T++ D LR+ F +G VPAIK AA +T+ +I +L+T T+RR Y Sbjct: 76 AQLIVVACNTASTVVLDHLRARF-QQPVVGVVPAIKTAATHTKKQVIGLLATQGTVRRAY 134 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + C + V + L E++ G ++ I+ F+E E D +V Sbjct: 135 TDELIRDFARHCQVIKVGAPDLVQWGEDWVRGRSPDMARLRGVIQ-PFLEAE---ADQVV 190 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG-K 255 L CTH+PL+ QL+P ++W+D+ ++IARR LL + H F SG K Sbjct: 191 LGCTHFPLLKPFLYQLAP-DINWVDSGEAIARRVAYLLQAQQSEGGEESTSHRAFYSGDK 249 Query: 256 PDIAMRRLMQGFGLKS 271 D R G S Sbjct: 250 QDSEWERGAMALGFSS 265 >gi|307292858|ref|ZP_07572704.1| glutamate racemase [Sphingobium chlorophenolicum L-1] gi|306880924|gb|EFN12140.1| glutamate racemase [Sphingobium chlorophenolicum L-1] Length = 267 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 114/214 (53%), Gaps = 1/214 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L FDSG+GGL +L + +P+ +Y AD GFPYG + + R+ L ++++Y Sbjct: 9 LLFFDSGVGGLSILAPAQAALPQAPVVYAADSAGFPYGTRSEADIAARVPALLGRLVERY 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P L+VIACNTA T+ +R+ + +G VPAIK AA +QS + +L T AT+R+ Sbjct: 69 RPRLAVIACNTASTIALSAVRAAL-DIPVVGTVPAIKPAALLSQSRVFGVLGTDATVRQP 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y L Y S C + S L E G + + + G + G R D++ Sbjct: 128 YVDRLAAEYGSDCTVLRHGSAALVQLAEAKLRGEPLDPAIARDALAGLLDQPGGDRMDIV 187 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VLACTH+PL+ SP P+ ++ + IARR Sbjct: 188 VLACTHFPLVEAELAAASPRPLRFVHGGEGIARR 221 >gi|304410374|ref|ZP_07391993.1| glutamate racemase [Shewanella baltica OS183] gi|307301915|ref|ZP_07581673.1| glutamate racemase [Shewanella baltica BA175] gi|304351783|gb|EFM16182.1| glutamate racemase [Shewanella baltica OS183] gi|306913953|gb|EFN44374.1| glutamate racemase [Shewanella baltica BA175] Length = 270 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 84/231 (36%), Positives = 126/231 (54%), Gaps = 3/231 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 QP + VIACNTA T+ D LR+ ++ +G VPAIK A + ++S ++ +L T T Sbjct: 61 SSLTQPNIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPATSLSKSKVVMVLGTHTT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Y LI + ++C + + S L E+ G D + +EI+ F + + Sbjct: 120 VNSAYVKMLITDFATECKVLVEDSEALVLASEQKLLGKAFDPDIVTQEIQRIFNKPDAFD 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 TDV+VLACTH+PLI + P V +D+ +IA R LL +I HQT Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLL-KIE-HQT 228 >gi|190151197|ref|YP_001969722.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252719|ref|ZP_07338881.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248913|ref|ZP_07530924.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307264546|ref|ZP_07546130.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|229486230|sp|B3GZ94|MURI_ACTP7 RecName: Full=Glutamate racemase gi|189916328|gb|ACE62580.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648458|gb|EFL78652.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854608|gb|EFM86800.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306870145|gb|EFN01905.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 267 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 8/262 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y + LI Y C + + + L VEE + +D + K + E + Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVA----EWQTHP 175 Query: 192 T-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 T D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ Sbjct: 176 TLDTVILGCTHFPLVKQELQQLLPKVKFFIDPGNGIANRVATLLSEFSLENSAQNKENIA 235 Query: 251 FLSGKPDIAMRR--LMQGFGLK 270 F + + +R +MQ +G K Sbjct: 236 FCTKMDEEFSKREIIMQQWGFK 257 >gi|217975220|ref|YP_002359971.1| glutamate racemase [Shewanella baltica OS223] gi|254766123|sp|B8EBM4|MURI_SHEB2 RecName: Full=Glutamate racemase gi|217500355|gb|ACK48548.1| glutamate racemase [Shewanella baltica OS223] Length = 274 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 126/235 (53%), Gaps = 9/235 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D++ + Sbjct: 5 ILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDLVART 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T++R Sbjct: 65 NAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGTVKRH 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKRTDV 194 YT +LI + CH+ L L E+ KI E+ + + DV Sbjct: 124 YTHSLISQFADDCHVELFGCSELVMMAEQ-----KIATGEMDMHRLADLLAPVVAAQLDV 178 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247 +VL CTH+P+I +Q+ V +D+ +IA+R LL + N Q RV ++ Sbjct: 179 LVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNFIVEQRRVTNE 233 >gi|152998730|ref|YP_001364411.1| glutamate racemase [Shewanella baltica OS185] gi|166231052|sp|A6WHQ9|MURI_SHEB8 RecName: Full=Glutamate racemase gi|151363348|gb|ABS06348.1| glutamate racemase [Shewanella baltica OS185] Length = 274 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 9/235 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D++ + Sbjct: 5 ILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDLVART 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T++R Sbjct: 65 NAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGTVKRH 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKRTDV 194 YT LI + CH+ L L E+ KI E+ + + DV Sbjct: 124 YTHELISQFADDCHVELFGCSELVMMAEQ-----KIATGEMDMHRLADLLAPVVAAQLDV 178 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247 +VL CTH+P+I +Q+ V +D+ +IA+R LL + N Q RV ++ Sbjct: 179 LVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRRVTNE 233 >gi|160873307|ref|YP_001552623.1| glutamate racemase [Shewanella baltica OS195] gi|189030369|sp|A9KW83|MURI_SHEB9 RecName: Full=Glutamate racemase gi|160858829|gb|ABX47363.1| glutamate racemase [Shewanella baltica OS195] gi|315265534|gb|ADT92387.1| glutamate racemase [Shewanella baltica OS678] Length = 274 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 9/235 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D++ + Sbjct: 5 ILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDLVART 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T++R Sbjct: 65 NAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGTVKRH 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKRTDV 194 YT LI + CH+ L L E+ KI E+ + + DV Sbjct: 124 YTHELISQFADDCHVELFGCSELVMMAEQ-----KIATGEMDMHRLADLLAPVVAAQLDV 178 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247 +VL CTH+P+I +Q+ V +D+ +IA+R LL + N Q RV ++ Sbjct: 179 LVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRRVTNE 233 >gi|269968664|ref|ZP_06182661.1| glutamate racemase [Vibrio alginolyticus 40B] gi|269826751|gb|EEZ81088.1| glutamate racemase [Vibrio alginolyticus 40B] Length = 267 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 120/222 (54%), Gaps = 7/222 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLISRVNQLVSSLV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + LV S L EE G + DE+ + + Sbjct: 124 TRQYTHELIRDFAQGKPVELVGSTRLVDMAEEKLRGNSVSLDELTN-----ILLPLRDKV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV VL CTH+PLI Q V +D+ +IARR + LL Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGGDVTLIDSGAAIARRVKALL 220 >gi|59713040|ref|YP_205816.1| glutamate racemase [Vibrio fischeri ES114] gi|75431448|sp|Q5E218|MURI_VIBF1 RecName: Full=Glutamate racemase gi|59481141|gb|AAW86928.1| glutamate racemase [Vibrio fischeri ES114] Length = 262 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/252 (33%), Positives = 132/252 (52%), Gaps = 10/252 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 ILIFDSGIGGL V +++++ +P +IY D+ FPYG + L +R + S + K+ Sbjct: 5 ILIFDSGIGGLSVYKEIKYQLPLAKYIYAFDNAAFPYGELTESVLIERTTHIISKLCSKF 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA T++ LR + +G VPAIK AA + I +L+TPAT++R+ Sbjct: 65 PIDIVVIACNTASTVVLPSLREKL-DIPVVGVVPAIKPAALVSNK--IGLLATPATVKRS 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ + L+ S L EE GI + E+K+ + + D I Sbjct: 122 YTYDLIKSFAPISDVQLLGSTRLVEMAEEKMIGIDVDITELKE-----ILSPWQNKVDTI 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+P + + ++ + +D+ ++IARR + LL +F+ +F S Sbjct: 177 VLGCTHFPFLKNEIKKALGNKILLIDSGEAIARRVKQLLNGDEVESAVLFEGE-VFCSA- 234 Query: 256 PDIAMRRLMQGF 267 P I L F Sbjct: 235 PSIKEEALNHTF 246 >gi|165977281|ref|YP_001652874.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307251416|ref|ZP_07533331.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307262335|ref|ZP_07543983.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|226707583|sp|B0BT16|MURI_ACTPJ RecName: Full=Glutamate racemase gi|165877382|gb|ABY70430.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306856584|gb|EFM88725.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306867998|gb|EFM99826.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 265 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 10/263 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE--IEGCFIEKEG 189 + R Y + LI Y C + + + L VEE KI+ ++ +E IE + Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEE-----KIRTGQVDQERLIEVIAEWQTH 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTH+PL+ +QL P ++D + IA R LL + ++ Sbjct: 175 PTLDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENI 234 Query: 250 LFLSGKPDIAMRR--LMQGFGLK 270 F + + +R +MQ +G K Sbjct: 235 AFCTKIDEEFFKREVIMQQWGFK 257 >gi|254360933|ref|ZP_04977079.1| glutamate racemase [Mannheimia haemolytica PHL213] gi|261492190|ref|ZP_05988760.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494308|ref|ZP_05990803.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153092412|gb|EDN73475.1| glutamate racemase [Mannheimia haemolytica PHL213] gi|261310038|gb|EEY11246.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312170|gb|EEY13303.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 263 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 137/262 (52%), Gaps = 7/262 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + ++R ++P H++Y D+ FPY + L +R + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDEIRKVLPHAHYLYCFDNAFFPYSEKSEAVLIERAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +K + V+ACNTA T++ LR F + +G VPAIK AAA +++ +I +L+T T Sbjct: 61 AEKQPLDMVVVACNTASTVVLPALREHF-NFPIVGTVPAIKPAAAISETKVIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK- 190 + R Y LI Y C + + + L VEE K+ + ++K +E +GK Sbjct: 120 VARPYVDELIRKYAQDCTVEKIGTTDLVEIVEEKQRSGKVDMNRLQKVVEAW----QGKP 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D ++L CTH+PL+ +QL P ++D IA+R LL Q F++ A Sbjct: 176 ELDTVILGCTHFPLVKAELQQLLPDVKYFVDPGVGIAKRVLSLLEERKFQQKADFENQAF 235 Query: 251 FLSGKPDIAMRR-LMQGFGLKS 271 +++ +MQ +G + Sbjct: 236 CTKQSSAFNIKQDVMQNWGFNN 257 >gi|307257940|ref|ZP_07539694.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863587|gb|EFM95516.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 267 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 135/262 (51%), Gaps = 8/262 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y + LI Y C + + + L VEE + +D + K + E + Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVA----EWQTHP 175 Query: 192 T-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 T D ++L CTH+PL+ +QL P ++D IA R LL + + ++ Sbjct: 176 TLDTVILGCTHFPLVKQELQQLLPKVKFFIDPGSGIANRVATLLSEFSLENSAQNKENIA 235 Query: 251 FLSGKPDIAMRR--LMQGFGLK 270 F + + +R +MQ +G K Sbjct: 236 FCTKMDEEFSKREIIMQQWGFK 257 >gi|269961492|ref|ZP_06175855.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833721|gb|EEZ87817.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 268 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/245 (32%), Positives = 131/245 (53%), Gaps = 9/245 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P ++Y+ D+ +PYG + L R+ L + ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPHMDYLYLFDNEAYPYGELDQDVLITRVNKLVAALV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA T++ LR+ S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 EEHQADIVVIACNTASTIVLPSLRANL-SIPVVGVVPAIKPASLLASQG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKR 191 R YT LI + + L+ S L EE K++ + I E+E + K Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEE-----KLRGESISLPELESILLPLRNK- 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV VL CTH+PLI Q V +D+ ++IARR + LL +++ ++ Sbjct: 178 VDVAVLGCTHFPLIKDEIHQALGGEVTLVDSGEAIARRVKALLTSDMKEESKEEGSKKIY 237 Query: 252 LSGKP 256 S P Sbjct: 238 ASAPP 242 >gi|90407369|ref|ZP_01215554.1| glutamate racemase [Psychromonas sp. CNPT3] gi|90311520|gb|EAS39620.1| glutamate racemase [Psychromonas sp. CNPT3] Length = 271 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 3/222 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 ILIFDSG+GGL + +++R + Y++D+ FPYG L +RL+ L +D K+ Sbjct: 6 ILIFDSGVGGLSIFEEIRKKNSKLSCYYLSDNAYFPYGELTKEVLTQRLLCLLTDFTKKH 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA T+ LR F S+ +G VPAIK A T++ +I +++TPAT+ R Sbjct: 66 PVDLIVIACNTASTIALKTLREHF-SIPIVGVVPAIKPACQLTKNNIIGLIATPATITRE 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEGKRTD 193 YTS LI + ++ + ++S L E + I ++K++ F E +R D Sbjct: 125 YTSLLIDEFATKKQVLTLASTALVKLAERKLSALPIDNMMLQKQLSDIFKEWLMLARRPD 184 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 IVL CTH+PL+ + +D+ +IA+R + LLP Sbjct: 185 TIVLGCTHFPLLKADIELCFGGNIQLVDSGGAIAKRVQKLLP 226 >gi|322515537|ref|ZP_08068520.1| glutamate racemase [Actinobacillus ureae ATCC 25976] gi|322118406|gb|EFX90666.1| glutamate racemase [Actinobacillus ureae ATCC 25976] Length = 265 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/263 (30%), Positives = 136/263 (51%), Gaps = 10/263 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AA +++ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAVVSETKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEG 189 + R Y + LI Y C + + S L VEE KI+ ++ +E G I + Sbjct: 120 VERPYVAELIEKYAKDCVVEKIGSTTLVELVEE-----KIRTGQVDQEQLGEVITEWQTH 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ Sbjct: 175 PTLDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSDLLSEFSQENSAQNRENI 234 Query: 250 LFLSGKPDIAMRR--LMQGFGLK 270 F + + +R +MQ +G K Sbjct: 235 AFCTKMDEEFSKREVIMQQWGFK 257 >gi|304412675|ref|ZP_07394279.1| glutamate racemase [Shewanella baltica OS183] gi|307307285|ref|ZP_07587022.1| glutamate racemase [Shewanella baltica BA175] gi|304349019|gb|EFM13433.1| glutamate racemase [Shewanella baltica OS183] gi|306910340|gb|EFN40772.1| glutamate racemase [Shewanella baltica BA175] Length = 274 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 78/228 (34%), Positives = 121/228 (53%), Gaps = 7/228 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+ Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCIALVCDL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGK 190 ++R YT LI + CH+ L L E+ KI E+ + Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQ-----KIATGEMDMHRLADLLAPVVAA 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N Sbjct: 175 QLDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQN 222 >gi|32035119|ref|ZP_00135171.1| COG0796: Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209303|ref|YP_001054528.1| glutamate racemase [Actinobacillus pleuropneumoniae L20] gi|303251132|ref|ZP_07337316.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253526|ref|ZP_07535396.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|166231024|sp|A3N3D7|MURI_ACTP2 RecName: Full=Glutamate racemase gi|126098095|gb|ABN74923.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302649983|gb|EFL80155.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859027|gb|EFM91070.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 265 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 135/262 (51%), Gaps = 8/262 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y + LI Y C + + + L VEE + +D + K + E + Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVA----EWQTHP 175 Query: 192 T-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 T D ++L CTH+PL+ +QL P ++D + IA R LL + ++ Sbjct: 176 TLDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIA 235 Query: 251 FLSGKPDIAMRR--LMQGFGLK 270 F + + +R +MQ +G K Sbjct: 236 FCTKIDEEFFKREVIMQQWGFK 257 >gi|319424831|gb|ADV52905.1| glutamate racemase [Shewanella putrefaciens 200] Length = 268 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 82/240 (34%), Positives = 124/240 (51%), Gaps = 11/240 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R L+P+ + Y+ D+ PYG E+ L + L ++ Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKLLPQKEYCYLFDNARLPYGELEEQVLISGCVTLIEEL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + V+ACNTA TL+ LR S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 AIRIDAAIVVVACNTASTLVLPALREKL-SIPIVGVVPAIKPAALMSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACGIKIKEDEIKKEIEGCFIEKEGK 190 +RR YT LI + CH+ L L E+ A GI E + Sbjct: 120 VRRHYTHKLISQFADGCHVELFGCSELVMMAEQKVATGILNIE-----RLARILAPVVAA 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 DV+VL CTH+P+I + + + V LD+ ++IA+R LL ++ V D+ + Sbjct: 175 DLDVLVLGCTHFPMIRNELQLVLGAGVTLLDSGEAIAKRVVALL----AQESEVLDNKTM 230 >gi|85708359|ref|ZP_01039425.1| glutamate racemase [Erythrobacter sp. NAP1] gi|85689893|gb|EAQ29896.1| glutamate racemase [Erythrobacter sp. NAP1] Length = 264 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 5/216 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL V +R L+P+ IY AD G PYG + + R+ L + ++Y Sbjct: 7 ILLFDSGVGGLTVHAAVRKLLPDAPIIYAADLAGLPYGTKSEAEIAARVAGLLGRMSERY 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 QP L IACNTA T+ +R + +G VPAIK A+A T++G I +L T AT+R+ Sbjct: 67 QPRLVCIACNTASTIALGMVRDVL-EVPIVGTVPAIKPASAITKTGTIGLLGTQATVRQA 125 Query: 136 YTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 Y NL + + + H S ++ A+ E G ++ I+ + G + D Sbjct: 126 YVDNLEAEFAADKRLLRHGASGLVRAA--EAKLRGEEVDRSVIQSAVATLRAMDGGDQID 183 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +VLACTH+PL+ V ++D +D IARR Sbjct: 184 TVVLACTHFPLLTEELGAEFGDGVSFVDGADGIARR 219 >gi|85060131|ref|YP_455833.1| glutamate racemase [Sodalis glossinidius str. 'morsitans'] gi|123518781|sp|Q2NQZ7|MURI_SODGM RecName: Full=Glutamate racemase gi|84780651|dbj|BAE75428.1| glutamate racemase [Sodalis glossinidius str. 'morsitans'] Length = 290 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 123/220 (55%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL + ++R +P H++YV D+ FPYG + + R++ + + + Sbjct: 27 TILVFDSGVGGLSIYNEVRQTLPNAHYLYVFDNEAFPYGEKPEQFIVDRVVAIVGAMWRQ 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++ L ++ACNTA T+ LR FP +G VPAIK AA T++G++ +L+T AT++R Sbjct: 87 HKIDLVIVACNTASTISLPALRERFPC-PIIGVVPAIKPAARLTRNGIVGLLATRATVQR 145 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT +LI Y C I + + L E G + ++K + + + D Sbjct: 146 SYTHDLISQYAGDCQILQLGTAELVDMAEARLHGELVPLPVLRKLLRPWL--RAAEPPDT 203 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+PL+ + + P +D+ +IARRA L+ Sbjct: 204 VVLGCTHFPLLSQELQAVLPEGTRLVDSGSAIARRAAWLV 243 >gi|27364591|ref|NP_760119.1| glutamate racemase [Vibrio vulnificus CMCP6] gi|320154994|ref|YP_004187373.1| glutamate racemase [Vibrio vulnificus MO6-24/O] gi|29839520|sp|Q8DD39|MURI_VIBVU RecName: Full=Glutamate racemase gi|27360710|gb|AAO09646.1| glutamate racemase [Vibrio vulnificus CMCP6] gi|319930306|gb|ADV85170.1| glutamate racemase [Vibrio vulnificus MO6-24/O] Length = 263 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 76/235 (32%), Positives = 128/235 (54%), Gaps = 7/235 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E Q ++LIFDSG+GGL V Q++ +PE ++ Y+ D+ +PYG L R+ L Sbjct: 2 ESSNQPNVLIFDSGVGGLSVFQEINKRLPEVNYYYLFDNQAYPYGELSQETLLARVEALV 61 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + ++ L VIACNTA T++ LR+ P + +G VPAIK A+ + +++T Sbjct: 62 VKMTQQFAIDLVVIACNTASTIVLPTLRAKLP-IPVVGVVPAIKPASLLANRA-VGLIAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 PAT+ R YT +LI + + + L+ S L EE G ++ + E+ ++ Sbjct: 120 PATVTRQYTHDLIRDFAHEKEVELLGSTRLVDIAEEKLRGRQVDQQEL-----AMILKPM 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + DV VL CTH+PL+ +Q+ + +D+ ++IARR + LL +++ T+ Sbjct: 175 KHKVDVAVLGCTHFPLLKEEIQQVLGDEIILVDSGEAIARRVQSLLHQLSPQSTK 229 >gi|37678352|ref|NP_932961.1| glutamate racemase [Vibrio vulnificus YJ016] gi|61214264|sp|Q7MQ40|MURI_VIBVY RecName: Full=Glutamate racemase gi|37197091|dbj|BAC92932.1| glutamate racemase [Vibrio vulnificus YJ016] Length = 263 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 76/235 (32%), Positives = 128/235 (54%), Gaps = 7/235 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E Q ++LIFDSG+GGL V Q++ +PE ++ Y+ D+ +PYG L R+ L Sbjct: 2 ESSNQPNVLIFDSGVGGLSVFQEINKRLPEVNYYYLFDNQAYPYGELSQETLLARVEALV 61 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + ++ L VIACNTA T++ LR+ P + +G VPAIK A+ + +++T Sbjct: 62 VKMTQQFAIDLVVIACNTASTIVLPALRAKLP-IPVVGVVPAIKPASLLANRA-VGLIAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 PAT+ R YT +LI + + + L+ S L EE G ++ + E+ ++ Sbjct: 120 PATVTRQYTHDLIRDFAHEKEVELLGSTRLVDIAEEKLRGRQVDQQEL-----AMILKPM 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + DV VL CTH+PL+ +Q+ + +D+ ++IARR + LL +++ T+ Sbjct: 175 KHKVDVAVLGCTHFPLLKEEIQQVLGDEIILVDSGEAIARRVQSLLHQLSPQSTK 229 >gi|268593423|ref|ZP_06127644.1| glutamate racemase [Providencia rettgeri DSM 1131] gi|291311122|gb|EFE51575.1| glutamate racemase [Providencia rettgeri DSM 1131] Length = 287 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 123/220 (55%), Gaps = 3/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL V ++++ ++P H+IY D+ FPYG + + R+ + + I K Sbjct: 27 TILVFDSGVGGLSVYREVKKMIPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQIVNAIAAK 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + +++IACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+ R Sbjct: 87 HPLTIAIIACNTASTVSLPNLRAHF-TFPVVGVVPAIKPATKLTRNGVVGLLATKGTVNR 145 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + + C + + S L E G + DE+ + + + + D Sbjct: 146 EYTKELIERFATDCKVISLGSAELVQLAERKLHGETLPLDEVAQTVRPWI--RMPEPPDT 203 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++L CTH+PL++ ++ P ++D+ +IARR L+ Sbjct: 204 VILGCTHFPLLIEELEKVLPNGTRFIDSGSAIARRTVWLI 243 >gi|120600465|ref|YP_965039.1| glutamate racemase [Shewanella sp. W3-18-1] gi|146294593|ref|YP_001185017.1| glutamate racemase [Shewanella putrefaciens CN-32] gi|120560558|gb|ABM26485.1| glutamate racemase [Shewanella sp. W3-18-1] gi|145566283|gb|ABP77218.1| glutamate racemase [Shewanella putrefaciens CN-32] Length = 268 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 82/240 (34%), Positives = 124/240 (51%), Gaps = 11/240 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R L+P+ + Y+ D+ PYG E+ L + L ++ Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKLLPQKEYCYLFDNARLPYGELEEQVLISGCVTLIEEL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + V+ACNTA TL+ LR S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 AIRIDAAIVVVACNTASTLVLPALREKL-SIPIVGVVPAIKPAALMSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACGIKIKEDEIKKEIEGCFIEKEGK 190 +RR YT LI + CH+ L L E+ A GI E + Sbjct: 120 VRRHYTHKLISQFADGCHVELFGCSELVMMAEQKVATGILNIE-----RLARILAPVVAA 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 DV+VL CTH+P+I + + + V LD+ ++IA+R LL ++ V D+ + Sbjct: 175 DLDVLVLGCTHFPMIRNELQLVLGAGVTLLDSGEAIAKRVVALL----AQESGVLDNKTM 230 >gi|149374689|ref|ZP_01892463.1| glutamate racemase [Marinobacter algicola DG893] gi|149361392|gb|EDM49842.1| glutamate racemase [Marinobacter algicola DG893] Length = 283 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 119/215 (55%), Gaps = 5/215 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V + +P +Y+AD+ GFPYG + + +R L L ++ Sbjct: 6 VLVFDSGVGGLSVADCIHRQLPGVKLVYLADNAGFPYGAQPESVVIERSQALIRLALSEF 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA T++ LR+ S+ +G VPA+K AAA +++ I +L+TPAT+RR Sbjct: 66 PCDVIVVACNTASTVVLPYLRA-MTSIPVVGVVPAVKPAAAVSENRRIGLLATPATVRRP 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y ++LI + S C + + L +E G + E + ++ D + Sbjct: 125 YLADLIDEFASDCTVERLGHPDLVQWIENLVSGSPVPEQALSVALQ----PFRDVGVDTV 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 VL CTHYPLI + ++ P W+D+ ++IARRA Sbjct: 181 VLGCTHYPLIKDLLQRQLPAVKHWVDSGEAIARRA 215 >gi|28899710|ref|NP_799315.1| glutamate racemase [Vibrio parahaemolyticus RIMD 2210633] gi|260361662|ref|ZP_05774689.1| glutamate racemase [Vibrio parahaemolyticus K5030] gi|260879377|ref|ZP_05891732.1| glutamate racemase [Vibrio parahaemolyticus AN-5034] gi|260897204|ref|ZP_05905700.1| glutamate racemase [Vibrio parahaemolyticus Peru-466] gi|260901359|ref|ZP_05909754.1| glutamate racemase [Vibrio parahaemolyticus AQ4037] gi|33301374|sp|Q87KP1|MURI_VIBPA RecName: Full=Glutamate racemase gi|28807962|dbj|BAC61199.1| glutamate racemase [Vibrio parahaemolyticus RIMD 2210633] gi|308089317|gb|EFO39012.1| glutamate racemase [Vibrio parahaemolyticus Peru-466] gi|308092828|gb|EFO42523.1| glutamate racemase [Vibrio parahaemolyticus AN-5034] gi|308108436|gb|EFO45976.1| glutamate racemase [Vibrio parahaemolyticus AQ4037] gi|308111294|gb|EFO48834.1| glutamate racemase [Vibrio parahaemolyticus K5030] Length = 270 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 122/222 (54%), Gaps = 7/222 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + L+ S L EE G + DE+K + + Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKS-----ILSPLCNKV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV VL CTH+PLI + +Q+ V +D+ ++IARR + LL Sbjct: 179 DVAVLGCTHFPLIKNEIQQVLGSNVVLIDSGEAIARRVKALL 220 >gi|328472462|gb|EGF43328.1| glutamate racemase [Vibrio parahaemolyticus 10329] Length = 270 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 122/222 (54%), Gaps = 7/222 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + L+ S L EE G + DE+K + + Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKS-----ILSPLCNKV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV VL CTH+PLI + +Q+ V +D+ ++IARR + LL Sbjct: 179 DVAVLGCTHFPLIKNEIQQVLGSNVVLIDSGEAIARRVKALL 220 >gi|126176362|ref|YP_001052511.1| glutamate racemase [Shewanella baltica OS155] gi|166231051|sp|A3DA79|MURI_SHEB5 RecName: Full=Glutamate racemase gi|125999567|gb|ABN63642.1| glutamate racemase [Shewanella baltica OS155] Length = 274 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 7/224 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D++ + Sbjct: 5 ILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDLVART 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T++R Sbjct: 65 NAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGTVKRH 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKRTDV 194 YT LI + CH+ L L E+ KI ++ + + DV Sbjct: 124 YTHELISQFADDCHVELFGCSELVMMAEQ-----KIATGQMDMHRLADLLAPVVAAQLDV 178 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +VL CTH+P+I +Q+ V +D+ +IA+R LL + N Sbjct: 179 LVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQN 222 >gi|294142952|ref|YP_003558930.1| glutamate racemase [Shewanella violacea DSS12] gi|293329421|dbj|BAJ04152.1| glutamate racemase [Shewanella violacea DSS12] Length = 291 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 119/222 (53%), Gaps = 5/222 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L IL+FDSGIGGL +L ++R +P ++IY+ D+ PYG + L + L +D Sbjct: 14 LSKPILVFDSGIGGLTILDEIRLALPNENYIYLFDNARLPYGELGEQELISGSVSLITDF 73 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + +IACNTA TLI LR+ ++ +G VPAIK AA ++ I +L+TP T Sbjct: 74 VKNESVSMVIIACNTASTLILPSLRAAL-NIPVVGVVPAIKPAALLSKKKHIGLLATPGT 132 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++RTYT LI + +C + L +S L E+ A G + + ++ + + + Sbjct: 133 IKRTYTHELIEQFAGECKVDLYASSELVLLAEQKAAGHPVTQQQLARILSPIY----QSE 188 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 D +VL CTH+P++ ++ + LD+ ++A R L Sbjct: 189 LDTLVLGCTHFPILRQEMQEYLGDKISLLDSGKAVAARVVTL 230 >gi|296105345|ref|YP_003615491.1| glutamate racemase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059804|gb|ADF64542.1| glutamate racemase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 260 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 3/219 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEDFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR+ F +G VPAIK AA T +G++ +L+T T++R Sbjct: 61 PLALAVIACNTASTVSLPALRAKF-QFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + ++C I ++ S L E G + +E+++ + E D + Sbjct: 120 YTRELIDRFANECQIAMLGSAELVEMAEAKLHGKTVPLEELRRILRPWLRMPEPP--DTV 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ ++ P +D+ +IARR LL Sbjct: 178 VLGCTHFPLLQEELLEVLPEGTRLVDSGAAIARRTAWLL 216 >gi|28275188|ref|NP_715848.2| glutamate racemase [Shewanella oneidensis MR-1] Length = 302 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/230 (33%), Positives = 120/230 (52%), Gaps = 13/230 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E L IL+FDSGIGGL VL ++R +P + + YV D+ PYG E+ L + L Sbjct: 27 ETGLSQPILVFDSGIGGLSVLAEIRKRLPHHDYCYVFDNARLPYGELEEQELVSGCVALI 86 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S ++++ + V+ACNTA T++ LR+ + +G VPAIK AA ++S I +L+T Sbjct: 87 SQLVERTHACIVVVACNTASTVVLPALRAKL-HIPVVGVVPAIKPAALLSKSKRIGLLAT 145 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSS----MILASRVEEYACGIKIKEDEIKKEIEGCF 184 P T++R YT LI + CH+ L M+ ++ GI + ++ Sbjct: 146 PGTVKRHYTHELISQFADDCHVELFGCSELVMMAEHKIATGQLGIARLTQILSPVVDA-- 203 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV+VL CTH+P++ +Q+ V LD+ +IA+R LL Sbjct: 204 ------NLDVLVLGCTHFPMLRDELQQVLGLGVTLLDSGAAIAKRVDTLL 247 >gi|145297189|ref|YP_001140030.1| glutamate racemase [Aeromonas salmonicida subsp. salmonicida A449] gi|142849961|gb|ABO88282.1| glutamate racemase [Aeromonas salmonicida subsp. salmonicida A449] Length = 263 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 85/260 (32%), Positives = 140/260 (53%), Gaps = 8/260 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL + +++R +P +++ Y D+ FPYG + AL L S ++ + Sbjct: 3 NILVFDSGMGGLTIYREIRRALPAHNYFYCFDNANFPYGELSESALIAACTRLVSHMVAE 62 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + L VIACNTA T+ LR+ ++ +G VPAIK AAA T++G I +L+TP T+ R Sbjct: 63 HVIDLVVIACNTASTIALPSLRAAL-TIPVVGVVPAIKPAAALTRNGCIGLLATPGTVSR 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT +LI + + L + L E G + + +E+ ++E E +R D Sbjct: 122 EYTHHLIAQFAPGKRVLLKGATELVIEAEHKLAGRPVNM-ALLQEVLTDWMEGE-ERPDT 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTH+PL+ RQL P +D+ ++ARR LL + ++ + + Sbjct: 180 LVLGCTHFPLLNDEIRQLMPG-CQLVDSGSAVARRVAHLLATVAEQPSQAVVQARAYCT- 237 Query: 255 KPDIAMRRL---MQGFGLKS 271 + D ++L +Q +GL S Sbjct: 238 RLDAQAQKLTAPLQAWGLSS 257 >gi|170718701|ref|YP_001783892.1| glutamate racemase [Haemophilus somnus 2336] gi|189030361|sp|B0URZ3|MURI_HAES2 RecName: Full=Glutamate racemase gi|168826830|gb|ACA32201.1| glutamate racemase [Haemophilus somnus 2336] Length = 267 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 126/229 (55%), Gaps = 4/229 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +IL FDSG+GGL V ++ + L+P+ H++Y D+ FPY ++ + R + + I Sbjct: 5 IQPTILFFDSGVGGLSVYKETKQLLPDCHYLYGFDNGFFPYSEKDEKDIIDRTLRICQKI 64 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 Y L VIACNTA T++ ELR F S+ +G VPAIK AA +++ I +++T T Sbjct: 65 NQTYPLDLIVIACNTASTVVLPELRRNF-SIPIVGTVPAIKPAAEMSETKHIGLIATKGT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++RTY ++LI +Y C + + S L E+ G ++ + +K+E+ K K Sbjct: 124 IKRTYVNDLIKNYAYHCMVEKIGSTKLVEIAEQKLRGGEVDLNVLKQELSPW---KTMKS 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 D +VL CTH+PLI P ++ + +IA+R + LL I Sbjct: 181 LDSVVLGCTHFPLIKEEIECCLPQVKFFVSSGKAIAKRVKFLLKGIEVR 229 >gi|92113464|ref|YP_573392.1| glutamate racemase [Chromohalobacter salexigens DSM 3043] gi|91796554|gb|ABE58693.1| glutamate racemase [Chromohalobacter salexigens DSM 3043] Length = 267 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 111/218 (50%), Gaps = 4/218 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ILIFDSG+GGL V+ +R +P YV D+ PYG D L R++ Sbjct: 1 MTAPILIFDSGVGGLSVVGALRARLPGAALAYVCDNAALPYGTKPDAWLVARIVAACRAA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + V+ACNTA TL LR + ++ +G VPAIK AA +SG+ +L+T AT Sbjct: 61 VAASGACALVVACNTASTLALQALRESL-TVPVIGTVPAIKPAAQLLRSGVFGLLATSAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI + + C + +++ L ++ E G E I + + E Sbjct: 120 VSRPYTQRLIGEFATHCTVIRLAADPLVAQAERVLAGRAPDEAVIAASLAPLW---EAPD 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D +VL CTH+PL+ +P V W+D+ D+IARR Sbjct: 177 LDTVVLGCTHFPLLRETLAAQAPRDVRWIDSGDAIARR 214 >gi|113461596|ref|YP_719665.1| glutamate racemase [Haemophilus somnus 129PT] gi|123132293|sp|Q0I5M2|MURI_HAES1 RecName: Full=Glutamate racemase gi|112823639|gb|ABI25728.1| glutamate racemase [Haemophilus somnus 129PT] Length = 267 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 126/229 (55%), Gaps = 4/229 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +IL FDSG+GGL V ++ + L+P+ H++Y D+ FPY ++ + R + + I Sbjct: 5 IQPTILFFDSGVGGLSVYKETKQLLPDCHYLYCFDNGFFPYSEKDEKDIIDRTLRICQKI 64 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 Y L VIACNTA T++ ELR F S+ +G VPAIK AA +++ I +++T T Sbjct: 65 NQAYPLDLIVIACNTASTVVLPELRRNF-SIPIVGTVPAIKPAAEMSETKHIGLIATKGT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++RTY ++LI +Y C + + S L E+ G ++ + +K+E+ + K Sbjct: 124 IKRTYVNDLIKNYAHHCMVEKIGSTKLVEIAEQKLRGGEVDLNVLKQELSPW---QTMKS 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 D +VL CTH+PLI P ++ + +IA+R + LL I Sbjct: 181 LDSVVLGCTHFPLIKEEIECCLPQVKFFVSSGKAIAKRVKFLLKGIEVR 229 >gi|219871943|ref|YP_002476318.1| glutamate racemase [Haemophilus parasuis SH0165] gi|254766116|sp|B8F7R8|MURI_HAEPS RecName: Full=Glutamate racemase gi|219692147|gb|ACL33370.1| glutamate racemase [Haemophilus parasuis SH0165] Length = 267 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 134/262 (51%), Gaps = 8/262 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P+ H++Y D+ FPY + L + + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRENLPDAHYLYCFDNAYFPYSEKSEAVLIELAVGIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y + V+ACNTA T++ LR F +M +G VPAIK AA +Q+ I +L+T T Sbjct: 61 AENYPLDMVVVACNTASTVVLPALRERF-AMPIVGTVPAIKPAAQISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y LI Y C + + S L VEE + ++K +E E + Sbjct: 120 VTRPYVDELIERYAKDCVVERIGSTDLVEIVEEKQQTGSVDMRRLQKVVE----EWQSHP 175 Query: 192 T-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 T D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ Sbjct: 176 TLDTVILGCTHFPLVKEELQQLLPRVSFFVDPGNGIANRVVSLLQDVKRNVNNENKENQA 235 Query: 251 FLSGKPDIAMRR--LMQGFGLK 270 F + + ++R +MQ +G K Sbjct: 236 FCTQNSENFLKREKVMQNWGFK 257 >gi|262404892|ref|ZP_06081446.1| glutamate racemase [Vibrio sp. RC586] gi|262348976|gb|EEY98115.1| glutamate racemase [Vibrio sp. RC586] Length = 265 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELAQETLIARVDALVTRMVEEE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI ++ + ++ L+ S L + EE G + DE++ + DV Sbjct: 127 YTQELIRNFSANKNVELLGSTRLVNMAEEKLRGKPLDLDELE-----SILHPLKHTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PLI +Q+ V +D+ +IARR + LL Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGVAIARRVQELL 220 >gi|261210140|ref|ZP_05924437.1| glutamate racemase [Vibrio sp. RC341] gi|260840680|gb|EEX67229.1| glutamate racemase [Vibrio sp. RC341] Length = 265 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELAQETLIARVDALVTRMVEEE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI ++ + ++ L+ S L + EE G + DE++ + DV Sbjct: 127 YTQELIRNFSANKNVELLGSTRLVNMAEEKLRGKPLDLDELE-----SILHPLKHTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PLI +Q+ V +D+ +IARR + LL Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGVAIARRVQELL 220 >gi|86148655|ref|ZP_01066936.1| glutamate racemase [Vibrio sp. MED222] gi|85833574|gb|EAQ51751.1| glutamate racemase [Vibrio sp. MED222] Length = 268 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 7/225 (3%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + +Q +ILIFDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ + + Sbjct: 5 ESIQKNILIFDSGVGGLSVYKEISHLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSIVA 64 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + + + VIACNTA T++ LR+ P + +G VPAIK A+ + +++TP Sbjct: 65 SFVASHAIDIVVIACNTASTIVLPTLRANNP-IPIVGVVPAIKPASLLANKA-VGLIATP 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ R YT LI ++ S + L+ S L E+ G I +E+++ ++ Sbjct: 123 ATITREYTHELIKNFSSNKRVELLGSTQLVDMAEDKLRGEAINLEELQQILQPMI----- 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV VL CTH+PLI +Q+ V +D+ +IA+R + LL Sbjct: 178 NTIDVAVLGCTHFPLIKSEIQQVLGKNVMLIDSGKAIAKRVQDLL 222 >gi|218710895|ref|YP_002418516.1| glutamate racemase [Vibrio splendidus LGP32] gi|218323914|emb|CAV20275.1| glutamate racemase [Vibrio splendidus LGP32] Length = 276 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 7/225 (3%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + +Q +ILIFDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ + + Sbjct: 13 ESIQKNILIFDSGVGGLSVYKEISQLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSIVA 72 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + + + VIACNTA T++ LR+ P + +G VPAIK A+ + +++TP Sbjct: 73 SFVASHAIDIVVIACNTASTIVLPTLRANNP-IPIVGVVPAIKPASLLANKA-VGLIATP 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ R YT LI ++ S + L+ S L E+ G I +E+++ ++ Sbjct: 131 ATITREYTHELIKNFSSNKRVELLGSTQLVDMAEDKLRGEAINLEELRQILQPMI----- 185 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV VL CTH+PLI +Q+ V +D+ +IA+R + LL Sbjct: 186 NTIDVAVLGCTHFPLIKSEIQQVLGKNVMLIDSGKAIAKRVQDLL 230 >gi|261249981|ref|ZP_05942558.1| glutamate racemase [Vibrio orientalis CIP 102891] gi|260939485|gb|EEX95470.1| glutamate racemase [Vibrio orientalis CIP 102891] Length = 267 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 81/233 (34%), Positives = 127/233 (54%), Gaps = 7/233 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K Q ILIFDSG+GGL V Q+++ +P+ ++Y+ D+ +PYG + L R+ L + Sbjct: 6 KQQAKILIFDSGVGGLSVYQEIQSKLPQLEYLYIFDNEAYPYGELDHDTLIDRVDRLVTS 65 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ K+ L VIACNTA T++ LR+ ++ +G VPAIK A+ + +++TPA Sbjct: 66 LVAKHHIDLVVIACNTASTIVLPTLRAKL-TIPVVGVVPAIKPASNLANKA-VGLIATPA 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ R YT +LI + + L+ S L EE G + E+K+ + IE Sbjct: 124 TVTRPYTHDLIRDFSQSKPVELLGSTRLVDIAEEKLRGKAVDLAELKQILAA--IE---N 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + DV VL CTH+PLI + + V +D+ ++IARR LL +TR Sbjct: 179 KVDVAVLGCTHFPLIKQEIQAVLTDRVLLVDSGEAIARRVEDLLETTGKKETR 231 >gi|85373785|ref|YP_457847.1| glutamate racemase [Erythrobacter litoralis HTCC2594] gi|84786868|gb|ABC63050.1| glutamate racemase [Erythrobacter litoralis HTCC2594] Length = 256 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 1/212 (0%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FD+G+GGL VL ++R ++P IY AD G PYG + + R+ L + ++YQP Sbjct: 1 MFDTGVGGLTVLAELRKVLPNAPVIYAADYAGLPYGTKTEAEVAARVCGLLGRMSERYQP 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R+ Y Sbjct: 61 RAICIACNTASTIALGMVREVL-EVPIIGTVPAIKPAAAMTETGVIGLLGTAATVRQPYV 119 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L + S + ++ L E G + + ++ E+ + R D +VL Sbjct: 120 DRLEAEFASDTVLIRFAASGLVDLAEAKLRGETVGTNSLRAEVRALLEAENADRIDTLVL 179 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 ACTH+PL+ Q+ V + ++ IARR Sbjct: 180 ACTHFPLLEEELLQVFGPQVRMVHGAEGIARR 211 >gi|114561314|ref|YP_748827.1| glutamate racemase [Shewanella frigidimarina NCIMB 400] gi|122301132|sp|Q089S6|MURI_SHEFN RecName: Full=Glutamate racemase gi|114332607|gb|ABI69989.1| glutamate racemase [Shewanella frigidimarina NCIMB 400] Length = 259 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 117/225 (52%), Gaps = 5/225 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL V+ ++R +P + + Y+ D+ PYGN + L + L + Sbjct: 1 MSGPILVFDSGIGGLSVMNEIRKQLPLHDYCYLFDNARLPYGNLSEQELITGCVALITHH 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + V+ACNTA TL+ LR ++ +G VPAIK AA ++ I +L+TP T Sbjct: 61 ARRLNASIVVVACNTASTLVLPLLRQQL-TIPIVGVVPAIKPAAMLSKKKHIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI+ + C + L + L E+Y +I D++ + Sbjct: 120 VKRDYTQALINQFAGNCKVELFGTSDLVLLAEQYVAQQQIDMDKLNE----ILAPIAASN 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 DV+VL CTH+P+I V LD+ +++A+R R LL + Sbjct: 176 IDVLVLGCTHFPMIATEISHYLGEGVTLLDSGEAVAKRVRFLLSK 220 >gi|330827753|ref|YP_004390705.1| glutamate racemase [Aeromonas veronii B565] gi|328802889|gb|AEB48088.1| Glutamate racemase [Aeromonas veronii B565] Length = 267 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 124/220 (56%), Gaps = 4/220 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +IL+FDSG+GGL + +++R ++P +++ Y D+ FPYG + AL L + ++ + Sbjct: 3 NILVFDSGMGGLTIYREIRRVLPAHNYFYCFDNANFPYGELSEPALIAACTRLVTTMVAR 62 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +Q L VIACNTA T+ LR + +G VPAIK AAA T++G I +L+TP T+ R Sbjct: 63 HQIDLVVIACNTASTIALPALREAL-DIPVVGVVPAIKPAAAQTRNGCIGLLATPGTVSR 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + + L + L E G+ + + +E+ ++E E ++ D Sbjct: 122 DYTHELIAQFAPSKRVLLKGTTELVIEAEHKLSGLPVNM-ALLREVLADWLEGE-EKPDT 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+PL+ QL P + +D+ ++A+R LL Sbjct: 180 LVLGCTHFPLLNEEIGQLMPQCM-LIDSGSAVAKRVAWLL 218 >gi|301156626|emb|CBW16097.1| glutamate racemase [Haemophilus parainfluenzae T3T1] Length = 263 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/227 (34%), Positives = 121/227 (53%), Gaps = 6/227 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L FDSG+GGL V ++ + LMP+ H++Y D+ GFPY + + +R + + I Sbjct: 5 TVLFFDSGMGGLSVYREAKKLMPDNHYLYCFDNAGFPYSEKSEETIIQRTLDICKKINQN 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y VIACNTA T++ LR F S+ +G VPAIK AA +Q+ I +L+T T++R Sbjct: 65 YPLDAIVIACNTASTVVLPPLREQF-SIPIVGTVPAIKPAAEISQTKHIGLLATKGTVKR 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG-CFIEKEGKRTD 193 Y ++LIH + S C + + S L E G + +K E+ IE D Sbjct: 124 PYVNDLIHQFASHCIVERLGSTKLVEIAEHKIQGKSVDLIALKNELSPWASIE----NLD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 I L CTH+PLI + P +++D +IA+R + LL ++ Sbjct: 180 TICLGCTHFPLIKDEIQICLPQVKNFMDPGFAIAKRLQFLLDKLEVQ 226 >gi|29839535|sp|Q8EK90|MURI_SHEON RecName: Full=Glutamate racemase gi|24345608|gb|AAN53293.1|AE015470_6 glutamate racemase [Shewanella oneidensis MR-1] Length = 273 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 119/227 (52%), Gaps = 13/227 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R +P + + YV D+ PYG E+ L + L S + Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKRLPHHDYCYVFDNARLPYGELEEQELVSGCVALISQL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ + V+ACNTA T++ LR+ + +G VPAIK AA ++S I +L+TP T Sbjct: 61 VERTHACIVVVACNTASTVVLPALRAKL-HIPVVGVVPAIKPAALLSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSS----MILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 ++R YT LI + CH+ L M+ ++ GI + ++ Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEHKIATGQLGIARLTQILSPVVDA----- 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV+VL CTH+P++ +Q+ V LD+ +IA+R LL Sbjct: 175 ---NLDVLVLGCTHFPMLRDELQQVLGLGVTLLDSGAAIAKRVDTLL 218 >gi|325577829|ref|ZP_08148104.1| glutamate racemase [Haemophilus parainfluenzae ATCC 33392] gi|325160574|gb|EGC72700.1| glutamate racemase [Haemophilus parainfluenzae ATCC 33392] Length = 263 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/226 (34%), Positives = 123/226 (54%), Gaps = 6/226 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++++L FDSG+GGL V ++ + LMP+ H++Y D+ GFPY + + +R + + I Sbjct: 3 KSTVLFFDSGMGGLSVYREAKKLMPDNHYLYCFDNAGFPYSEKSEETIIQRTLDICKKIN 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y VIACNTA T++ LR F S+ +G VPAIK AA +Q+ I +L+T T+ Sbjct: 63 QDYPLDAIVIACNTASTVVLPPLREQF-SIPIVGTVPAIKPAAEISQTKHIGLLATKGTV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG-CFIEKEGKR 191 +R Y ++LIH + S C + + S L E G + +K E+ IE Sbjct: 122 KRPYVNDLIHQFASHCVVERLGSTKLVEIAEHKIQGKSVDLIALKNELTPWASIE----N 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 D I L CTH+PLI + P +++D +IA+R + LL ++ Sbjct: 178 LDTICLGCTHFPLIKDEIQICLPQVKNFMDPGFAIAKRLQFLLDKL 223 >gi|156935905|ref|YP_001439821.1| glutamate racemase [Cronobacter sakazakii ATCC BAA-894] gi|156534159|gb|ABU78985.1| hypothetical protein ESA_03799 [Cronobacter sakazakii ATCC BAA-894] Length = 253 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 133/249 (53%), Gaps = 4/249 (1%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y L+VI Sbjct: 1 MGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVEIVTAVQARYPLALAVI 60 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 ACN+A T+ LR F + +G VPAIK AA T +G++ +L+T T++R YT LI Sbjct: 61 ACNSASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGMVGLLATRGTVKRPYTHELIA 119 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 + ++C I ++ S L E G + + +++ + + + D +VL CTH+ Sbjct: 120 RFANECQIEMLGSAELVEIAEAKLHGEPVSLEALRRVLRPWL--RMPEPPDTVVLGCTHF 177 Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA-MR 261 PL+ Q+ P +D+ +IARR LL ++ A ++ P++A + Sbjct: 178 PLLAEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDACSSDENIAYCMALTPEVAQLM 237 Query: 262 RLMQGFGLK 270 ++Q +G Sbjct: 238 SVLQRYGFN 246 >gi|229525050|ref|ZP_04414455.1| glutamate racemase [Vibrio cholerae bv. albensis VL426] gi|229338631|gb|EEO03648.1| glutamate racemase [Vibrio cholerae bv. albensis VL426] Length = 265 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/244 (33%), Positives = 133/244 (54%), Gaps = 15/244 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +L+TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLLATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFL 252 VL CTH+PLI +Q+ V +D+ +IARR + LL + T+Q H ++ Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGVGTNQ-----KHQIYA 236 Query: 253 SGKP 256 S P Sbjct: 237 SAPP 240 >gi|197336453|ref|YP_002157219.1| glutamate racemase [Vibrio fischeri MJ11] gi|226707593|sp|B5FCA3|MURI_VIBFM RecName: Full=Glutamate racemase gi|197317943|gb|ACH67390.1| glutamate racemase [Vibrio fischeri MJ11] Length = 261 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/252 (32%), Positives = 133/252 (52%), Gaps = 11/252 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 ILIFDSGIGGL V +++++ +P +IY D+ FPYG + L +R + S++ ++ Sbjct: 5 ILIFDSGIGGLSVYKEIKYQLPLAKYIYAFDNAAFPYGELTESVLIERTTHIISELCSQF 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA T++ LR + +G VPAIK AA + I +L+TPAT++R+ Sbjct: 65 PIDIVVIACNTASTVVLPSLRDKL-DIPVVGVVPAIKPAALVSNK--IGLLATPATVKRS 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI S+ + L+ S L EE GI + + K+++ + D I Sbjct: 122 YTYDLIKSFAPISDVQLLGSTRLVEMAEEKMIGIDV-DMRAKRDLSPW-----QNKVDTI 175 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+P + + ++ + +D+ ++IARR + LL +F+ +F S Sbjct: 176 VLGCTHFPFLKNEIKKALGNKILLIDSGEAIARRVKQLLNGDGVESAVLFEGE-VFCSA- 233 Query: 256 PDIAMRRLMQGF 267 P I L F Sbjct: 234 PSIKEEALNHTF 245 >gi|167626058|ref|YP_001676352.1| glutamate racemase [Shewanella halifaxensis HAW-EB4] gi|189030370|sp|B0TMV5|MURI_SHEHH RecName: Full=Glutamate racemase gi|167356080|gb|ABZ78693.1| glutamate racemase [Shewanella halifaxensis HAW-EB4] Length = 266 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 136/259 (52%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I+IFDSGIGGL + +++ ++P+ + Y+ D+ PYG E+ L K + L + Sbjct: 1 MSGPIVIFDSGIGGLSIFDEIKKVLPDQGYCYLFDNARLPYGELEESVLIKGCVDLICEQ 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + VL V+ACN+A TL+ LR+ S+ +G VPAIK AA +++ I +L+T T Sbjct: 61 VKRIDAVLVVVACNSASTLVLPGLRARL-SIPIVGVVPAIKPAAQISKTRHIGLLATHGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R+YT LI + C + L S L E G K+ D IK E + I+ Sbjct: 120 IKRSYTRELIKEFAGDCKVDLFGSSELVMLAEAKLAGEKL--DLIKLESQLKPIQH--SD 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250 D +VL CTH+P+I +Q+ V LD+ +IA+R LL I + A+ Sbjct: 176 LDTLVLGCTHFPIIADEIQQVLGAGVKLLDSGKAIAQRVSYLLENIEDKLDNSAGELMAI 235 Query: 251 FLSGK--PDIAMRRLMQGF 267 + + + P +A R +GF Sbjct: 236 YTTEEITPGLATRLAEKGF 254 >gi|153826314|ref|ZP_01978981.1| glutamate racemase [Vibrio cholerae MZO-2] gi|149739982|gb|EDM54161.1| glutamate racemase [Vibrio cholerae MZO-2] Length = 265 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/244 (32%), Positives = 134/244 (54%), Gaps = 15/244 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFL 252 VL CTH+PLI +Q+ V +D+ +IARR + LL ++T+Q H ++ Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGVDTNQ-----KHQIYA 236 Query: 253 SGKP 256 S P Sbjct: 237 SAPP 240 >gi|304413419|ref|ZP_07394892.1| glutamate racemase [Candidatus Regiella insecticola LSR1] gi|304284262|gb|EFL92655.1| glutamate racemase [Candidatus Regiella insecticola LSR1] Length = 292 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 126/234 (53%), Gaps = 3/234 (1%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 ++ N +++ + ++LIFDSG+GGL + Q++R L+P H+IY D+ FPYG + + Sbjct: 17 LQARNAKVDQRFRPTVLIFDSGVGGLSIYQEIRQLLPNIHYIYAFDNQAFPYGEKTEAFI 76 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++ L VIACNTA T+ LR F +G VPAIK A T++ Sbjct: 77 VERVLKIVTRVQQQHPLTLVVIACNTASTVSLPTLRKYF-FFPIVGVVPAIKPAVQLTRN 135 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L+T AT+ TY +LI + + C I + S L + E+ G + + ++K + Sbjct: 136 KRIGLLATRATIHCTYIQDLIECFAADCQIERLWSSELVTLAEKKLHGGSVSVEALRKIL 195 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+PL+ ++ P+ +D+ +IA R LL Sbjct: 196 TPWL--NMDSPPDTVVLGCTHFPLLAEELAKILPYNTQMVDSGAAIAHRVVWLL 247 >gi|229520053|ref|ZP_04409481.1| glutamate racemase [Vibrio cholerae TM 11079-80] gi|229342841|gb|EEO07831.1| glutamate racemase [Vibrio cholerae TM 11079-80] Length = 265 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/244 (32%), Positives = 133/244 (54%), Gaps = 15/244 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVGTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFL 252 VL CTH+PLI +Q+ V +D+ +IARR + LL + T+Q H ++ Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGVGTNQ-----KHQIYA 236 Query: 253 SGKP 256 S P Sbjct: 237 SAPP 240 >gi|149912317|ref|ZP_01900882.1| glutamate racemase [Moritella sp. PE36] gi|149804604|gb|EDM64670.1| glutamate racemase [Moritella sp. PE36] Length = 262 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 120/226 (53%), Gaps = 3/226 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + ILIFDSG+GG+ + + ++ +P ++Y+ D+ FPYG + L R+ L + + Sbjct: 2 SKILIFDSGVGGISIYKAIKEQLPNADYLYLFDNKYFPYGELDPEFLIDRVCQLIGYMCE 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + P L VIACN+A TL+ LR F S+ F+G VPAIK AA ++ I +L+TP T+ Sbjct: 62 NHSPDLVVIACNSASTLVLPALRKRF-SIPFVGVVPAIKPAALQSKKKKIGLLATPGTVS 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT L++ + C I ++ + L + E G + D I + D Sbjct: 121 REYTQLLVNEHAQDCEIDMIGTTSLVLQAENKLYGHPVDLDAINNVVSKW--SDPQNSPD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 V+VL CTH+PL+V + ++D+ +IA R + +L NT Sbjct: 179 VVVLGCTHFPLLVTELEASLGEHIQFIDSGMAIALRVKDILGEKNT 224 >gi|153803564|ref|ZP_01958150.1| glutamate racemase [Vibrio cholerae MZO-3] gi|153831286|ref|ZP_01983953.1| glutamate racemase [Vibrio cholerae 623-39] gi|229512363|ref|ZP_04401839.1| glutamate racemase [Vibrio cholerae TMA 21] gi|229527102|ref|ZP_04416496.1| glutamate racemase [Vibrio cholerae 12129(1)] gi|254292226|ref|ZP_04962991.1| glutamate racemase [Vibrio cholerae AM-19226] gi|297581776|ref|ZP_06943697.1| glutamate racemase [Vibrio cholerae RC385] gi|124120901|gb|EAY39644.1| glutamate racemase [Vibrio cholerae MZO-3] gi|148873230|gb|EDL71365.1| glutamate racemase [Vibrio cholerae 623-39] gi|150421862|gb|EDN13844.1| glutamate racemase [Vibrio cholerae AM-19226] gi|229335333|gb|EEO00816.1| glutamate racemase [Vibrio cholerae 12129(1)] gi|229350618|gb|EEO15562.1| glutamate racemase [Vibrio cholerae TMA 21] gi|297533870|gb|EFH72710.1| glutamate racemase [Vibrio cholerae RC385] gi|327483054|gb|AEA77461.1| Glutamate racemase [Vibrio cholerae LMA3894-4] Length = 265 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/244 (32%), Positives = 133/244 (54%), Gaps = 15/244 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFL 252 VL CTH+PLI +Q+ V +D+ +IARR + LL + T+Q H ++ Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGVGTNQ-----KHQIYA 236 Query: 253 SGKP 256 S P Sbjct: 237 SAPP 240 >gi|238754700|ref|ZP_04616052.1| Glutamate racemase [Yersinia ruckeri ATCC 29473] gi|238707008|gb|EEP99373.1| Glutamate racemase [Yersinia ruckeri ATCC 29473] Length = 248 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 133/246 (54%), Gaps = 10/246 (4%) Query: 30 QKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFT 89 Q++R L+P+ H+IY D+V FPYG + + +R++ + + + ++ + VIACNTA T Sbjct: 3 QEIRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQQHPLAIVVIACNTAST 62 Query: 90 LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCH 149 + LR F S +G VPAIK AA T++G++ +L+T AT+ R+YT +LI + + C Sbjct: 63 VSLPALRERF-SFPVVGVVPAIKPAARLTRNGVVGLLATRATVHRSYTLDLIARFATDCK 121 Query: 150 IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209 I L+ S L E G ++ +KK + +E D +VL CTH+PL+ Sbjct: 122 IELLGSSELVELAETKLHGGEVSLSVLKKILNPWLSMREPP--DTVVLGCTHFPLLAEEL 179 Query: 210 RQLSPWPVDWLDNSDSIARRARCLLPR----INTHQTRVFDDHALFLSGKPDIAMRRLMQ 265 Q+ P +D+ +IARR L+ I+T + V + L L D A+ ++Q Sbjct: 180 AQVLPEGTRMVDSGAAIARRTAWLISSQENVISTQEDNV--AYCLTLDAGTD-ALLPVLQ 236 Query: 266 GFGLKS 271 G+G + Sbjct: 237 GYGFPT 242 >gi|153217406|ref|ZP_01951157.1| glutamate racemase [Vibrio cholerae 1587] gi|124113576|gb|EAY32396.1| glutamate racemase [Vibrio cholerae 1587] Length = 265 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/244 (32%), Positives = 133/244 (54%), Gaps = 15/244 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFL 252 VL CTH+PLI +Q+ V +D+ +IARR + LL + T+Q H ++ Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGVGTNQ-----KHQIYA 236 Query: 253 SGKP 256 S P Sbjct: 237 SAPP 240 >gi|84394314|ref|ZP_00993037.1| glutamate racemase [Vibrio splendidus 12B01] gi|84375044|gb|EAP91968.1| glutamate racemase [Vibrio splendidus 12B01] Length = 276 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 124/223 (55%), Gaps = 7/223 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 LQ +IL+FDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ + + Sbjct: 15 LQKNILVFDSGVGGLSVYKEISQLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSIVTSF 74 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + + VIACNTA T++ LR+ S+ +G VPAIK A+ + +++TPAT Sbjct: 75 VASHAIDIVVIACNTASTIVLPTLRAN-NSIPIVGVVPAIKPASLLANKA-VGLIATPAT 132 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI ++ S + L+ S L E+ G I +E+++ ++ Sbjct: 133 ITREYTHELIKNFSSNKRVELLGSTRLVDMAEDKLRGEAINLEELQQILQPMI-----NT 187 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV VL CTH+PLI +Q+ V +D+ +IA+R + LL Sbjct: 188 IDVAVLGCTHFPLIKSEIQQVLGKSVLLVDSGKAIAKRVQDLL 230 >gi|15640188|ref|NP_229815.1| glutamate racemase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591662|ref|ZP_01678900.1| glutamate racemase [Vibrio cholerae 2740-80] gi|147673599|ref|YP_001218240.1| glutamate racemase [Vibrio cholerae O395] gi|227080392|ref|YP_002808943.1| glutamate racemase [Vibrio cholerae M66-2] gi|229508432|ref|ZP_04397936.1| glutamate racemase [Vibrio cholerae BX 330286] gi|229508887|ref|ZP_04398377.1| glutamate racemase [Vibrio cholerae B33] gi|229517001|ref|ZP_04406447.1| glutamate racemase [Vibrio cholerae RC9] gi|229606705|ref|YP_002877353.1| glutamate racemase [Vibrio cholerae MJ-1236] gi|254851543|ref|ZP_05240893.1| glutamate racemase [Vibrio cholerae MO10] gi|255743894|ref|ZP_05417849.1| glutamate racemase [Vibrio cholera CIRS 101] gi|262166982|ref|ZP_06034700.1| glutamate racemase [Vibrio cholerae RC27] gi|298501081|ref|ZP_07010881.1| glutamate racemase [Vibrio cholerae MAK 757] gi|11386939|sp|Q9KVI7|MURI_VIBCH RecName: Full=Glutamate racemase gi|172047523|sp|A5F4P4|MURI_VIBC3 RecName: Full=Glutamate racemase gi|254766132|sp|C3LPZ8|MURI_VIBCM RecName: Full=Glutamate racemase gi|9654559|gb|AAF93334.1| glutamate racemase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546478|gb|EAX56698.1| glutamate racemase [Vibrio cholerae 2740-80] gi|146315482|gb|ABQ20021.1| glutamate racemase [Vibrio cholerae O395] gi|227008280|gb|ACP04492.1| glutamate racemase [Vibrio cholerae M66-2] gi|227011822|gb|ACP08032.1| glutamate racemase [Vibrio cholerae O395] gi|229346064|gb|EEO11036.1| glutamate racemase [Vibrio cholerae RC9] gi|229354004|gb|EEO18937.1| glutamate racemase [Vibrio cholerae B33] gi|229354705|gb|EEO19627.1| glutamate racemase [Vibrio cholerae BX 330286] gi|229369360|gb|ACQ59783.1| glutamate racemase [Vibrio cholerae MJ-1236] gi|254847248|gb|EET25662.1| glutamate racemase [Vibrio cholerae MO10] gi|255738377|gb|EET93767.1| glutamate racemase [Vibrio cholera CIRS 101] gi|262024566|gb|EEY43249.1| glutamate racemase [Vibrio cholerae RC27] gi|297540115|gb|EFH76176.1| glutamate racemase [Vibrio cholerae MAK 757] Length = 265 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PLI +Q+ V +D+ +IARR + LL Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 220 >gi|119944401|ref|YP_942081.1| glutamate racemase [Psychromonas ingrahamii 37] gi|119863005|gb|ABM02482.1| glutamate racemase [Psychromonas ingrahamii 37] Length = 268 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 91/267 (34%), Positives = 141/267 (52%), Gaps = 20/267 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V ++R P Y+ D+ FPYG + L +RLM L S L ++ Sbjct: 6 VLIFDSGVGGLSVFDQVRKQSPGIKCFYLFDNAYFPYGELQADFLIQRLMSLLSSFLGRH 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACN+A T+ LR +F S+ +G VPAIK A T++G+I +L+TPAT+ Sbjct: 66 KIDLIVIACNSASTVALQYLRESF-SIPIVGVVPAIKPATFLTKNGVIGLLATPATINGA 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT+ LI + + + + S L E G I++ +I+ + + D I Sbjct: 125 YTARLIDEFAADKQVLKIGSTQLVKLAELKLQGKLIQQADIEGVLAAWLMLD--TMPDTI 182 Query: 196 VLACTHYPLI-VHVFRQLSPWPVDWLDNSDSIARRARCLL------PRINTHQ---TRVF 245 VL CTH+PL+ +FR ++ +D+ ++IA+R LL + NTHQ T+V+ Sbjct: 183 VLGCTHFPLLKAEIFRCFKD-KINLVDSGNAIAQRVTQLLGESEMTAKENTHQAYFTKVY 241 Query: 246 D-DHALFLSGKPDIAMRRLMQGFGLKS 271 D + S A++R +G S Sbjct: 242 QLDESTNFS-----ALQRSFLAYGFNS 263 >gi|157377467|ref|YP_001476067.1| glutamate racemase [Shewanella sediminis HAW-EB3] gi|157319841|gb|ABV38939.1| Glutamate racemase [Shewanella sediminis HAW-EB3] Length = 282 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 118/220 (53%), Gaps = 5/220 (2%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + L IL+FDSGIGGL + ++R ++P+ + Y+ D+ PYG ++ L L + Sbjct: 7 RDLSGPILVFDSGIGGLSIFDEIRQVLPDKQYCYLFDNARLPYGELDEQVLISGCKALIT 66 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 I+ L VIACNTA TL+ LR ++ +G VPAIK AAA +++ I +L+TP Sbjct: 67 SIVKMIDASLIVIACNTASTLVLPALREVL-NIPVVGVVPAIKPAAALSRNKHIGVLATP 125 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+RR YT LI + C + L S L E A GI I + +I K + I+ G Sbjct: 126 GTIRRPYTHELIEQFGGDCKVELYGSSELVILSERKAAGIDIIQADIAKILNP--IKCSG 183 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D +VL CTH+P++ + V LD++ ++A R Sbjct: 184 --LDTLVLGCTHFPMLKVEIQDYLGENVLLLDSAKAVAAR 221 >gi|262163706|ref|ZP_06031447.1| glutamate racemase [Vibrio mimicus VM223] gi|262027922|gb|EEY46586.1| glutamate racemase [Vibrio mimicus VM223] Length = 265 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V Q++ +P+ +IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYQEIEARLPQLSYIYLFDNAAYPYGELAQETLIARVNTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E++ + DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELE-----SILHPLKHTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PLI +Q+ V +D+ +IARR + LL Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 220 >gi|91791601|ref|YP_561252.1| glutamate racemase [Shewanella denitrificans OS217] gi|123357218|sp|Q12SP7|MURI_SHEDO RecName: Full=Glutamate racemase gi|91713603|gb|ABE53529.1| glutamate racemase [Shewanella denitrificans OS217] Length = 277 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 5/223 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R +P ++ Y+ D+ PYG+ + L + + L Sbjct: 1 MSGPILVFDSGIGGLSVLAEIRKRLPAENYCYLFDNARLPYGDLSESELIRGCVELICQQ 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + + + V+ACNTA TL+ LR ++ +G VPAIK AA ++ I +L+TP T Sbjct: 61 VQQVEAKIVVVACNTASTLVLPVLRQRL-TIPVVGVVPAIKPAALLSKRKHIGVLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI + C + L S L E+ A + + ++ K + + Sbjct: 120 VSRDYTHGLISQFAEDCQVDLFGSSELVMLAEQKAAKLPVNNQQLAK----ILAPIKASK 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV+VL CTH+P+I Q V LD+ ++IA R LL Sbjct: 176 LDVLVLGCTHFPMIKEELSQYLGESVLLLDSGEAIANRVASLL 218 >gi|284009189|emb|CBA76250.1| glutamate racemase [Arsenophonus nasoniae] Length = 279 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 6/231 (2%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + +ILIFDSG+GGL V +++R L+P+ H+IY D+ FPYG + +R++ Sbjct: 14 KTARPTILIFDSGVGGLSVYREVRQLLPDLHYIYAFDNDAFPYGEKSAEFIIERIIRFID 73 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 I K+ +++IACNTA T+ LR+ F +G VPAIK A T++G+I +L+T Sbjct: 74 QIQQKHALAIAIIACNTASTVSLPILRAHF-QFPIIGVVPAIKPATKLTRNGIIGLLATK 132 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ YT LI + C + +++S L E+ G I + + + ++ KE Sbjct: 133 ATVSGNYTRELIDRFAVDCKVEMIASSELVELAEKKLHGQIISTETLVRIVKPWLKMKEP 192 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 D IVL CTH+PL+ +++ +D+ +IARRA L IN H Sbjct: 193 P--DTIVLGCTHFPLLSAELKEVLFDGTRLIDSGAAIARRAVWL---INNH 238 >gi|258626053|ref|ZP_05720908.1| glutamate racemase [Vibrio mimicus VM603] gi|258581673|gb|EEW06567.1| glutamate racemase [Vibrio mimicus VM603] Length = 265 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDALVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E++ + DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELEN-----ILHPLKHTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PLI +Q+ V +D+ +IARR + LL Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 220 >gi|323144068|ref|ZP_08078711.1| glutamate racemase [Succinatimonas hippei YIT 12066] gi|322416144|gb|EFY06835.1| glutamate racemase [Succinatimonas hippei YIT 12066] Length = 267 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 118/219 (53%), Gaps = 2/219 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L FDSG+GG V ++ L P + Y+ D+ FPYGN ++ + KR + + + ++ Sbjct: 4 VLFFDSGLGGTSVFSAVKELNPNCSYYYLFDNECFPYGNKDEAFIIKRTDEILEESVRRF 63 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L ++ACNTA T+ +LR + +G VPAIK AA ++S +I +++TP T+RR Sbjct: 64 SVSLIIVACNTASTVALPKLRDRI-KIPIVGVVPAIKPAAIKSKSKIIGLVATPGTIRRA 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT++LI + C + + + L E G + E+ + + K +R D I Sbjct: 123 YTNDLIEKFAKDCKVLKIGTTDLVRLCERKMAGKPVTLTEVAEVFGPWLMLKPEERPDSI 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PL+ L P V +D+ ++I RR R L+ Sbjct: 183 VLGCTHFPLVKDEIGTLFPDAV-LVDSGEAIGRRVRSLI 220 >gi|323498757|ref|ZP_08103744.1| glutamate racemase [Vibrio sinaloensis DSM 21326] gi|323316185|gb|EGA69209.1| glutamate racemase [Vibrio sinaloensis DSM 21326] Length = 262 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 120/222 (54%), Gaps = 7/222 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q ++LIFDSG+GGL V +++ ++P+ ++ Y+ D+ +PYG E L R+ L ++ Sbjct: 4 QANVLIFDSGVGGLSVYEEIARILPQLNYTYIFDNEAYPYGELEHDTLIHRVDALIGSLV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + L VIACNTA T++ LR P + +G VPAIK A+ + +++TPAT+ Sbjct: 64 KEQEIDLVVIACNTASTIVLPTLRQRLP-IPIVGVVPAIKPASNMANIA-VGLIATPATV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT +LI S+ + L+ S L EE G + E+ + + Sbjct: 122 TRQYTHDLIRSFSQSKPVELLGSTRLVDMAEEKLRGKALDLQELSQ-----ILAPISGHI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV VL CTH+PLI +Q+ V +D+ +IARR + LL Sbjct: 177 DVAVLGCTHFPLIKQEIQQVLGSSVLLVDSGKAIARRVQALL 218 >gi|296283687|ref|ZP_06861685.1| glutamate racemase [Citromicrobium bathyomarinum JL354] Length = 264 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 114/214 (53%), Gaps = 1/214 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 ILIFDSG+GGL +L ++R +P+ IY AD G PYG + + R+ L + ++Y Sbjct: 7 ILIFDSGVGGLTILAELRKTLPQAPVIYAADFAGLPYGTKSEAEVAARVCGLLGRMAERY 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 QP L IACNTA T+ +R + +G VPAIK AA TQ+G+I +L T AT+R+ Sbjct: 67 QPRLICIACNTASTIALSMVRDVL-EVPIVGTVPAIKPAALATQTGVIGLLGTGATVRQP 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y L + + + +S L E G + E + + + G + + + D + Sbjct: 126 YVDRLEAEFAADKRLIRHASDALVPLAEAKMRGETLAEGAVAEAVAGLRDDPQAQDLDTL 185 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VLACTH+PL+ R + + +D + IARR Sbjct: 186 VLACTHFPLLADELRAVFGQDIQLVDGAQGIARR 219 >gi|323495305|ref|ZP_08100385.1| glutamate racemase [Vibrio brasiliensis LMG 20546] gi|323310440|gb|EGA63624.1| glutamate racemase [Vibrio brasiliensis LMG 20546] Length = 264 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 122/219 (55%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 ILIFDSG+GGL V ++++ +P+ ++Y+ D+ +PYG + L R+ + S ++ ++ Sbjct: 8 ILIFDSGVGGLSVYKEIQAQLPQLDYLYIFDNEAYPYGELDHDTLIARVDTIVSSLVAQH 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q L VIACNTA T++ LR+ S+ +G VPAIK A+ + +++TPAT+ R Sbjct: 68 QIDLVVIACNTASTIVLPTLRAKL-SVPVVGVVPAIKPASNLANKA-VGLIATPATITRP 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI + + L+ S L EE G + +E+K + + DV Sbjct: 126 YTHDLIRDFSQSKPVELLGSTRLVDIAEEKLRGKAVDLEELKN-----ILAPMESKIDVA 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PLI + + V +D+ ++IARR + LL Sbjct: 181 VLGCTHFPLIREEIQAVLTNHVQLVDSGEAIARRVKDLL 219 >gi|308047962|ref|YP_003911528.1| glutamate racemase [Ferrimonas balearica DSM 9799] gi|307630152|gb|ADN74454.1| glutamate racemase [Ferrimonas balearica DSM 9799] Length = 258 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 120/221 (54%), Gaps = 5/221 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL + Q +R +P + Y+AD+ FPYG L + + L + Sbjct: 2 GAILLFDSGLGGLTIYQHIRQALPNRRYRYLADNARFPYGELAPDELVQGCVDLIRAQMA 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACN+A TL+ + LR+ +G VPAIK AAA + +I +L+TP T+R Sbjct: 62 EEPIDLVVIACNSASTLVLEPLRAAI-DCPVVGVVPAIKPAAAMSHRKVIGLLATPGTVR 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT L + + C + + S L E+ G + +++ I G F++++ D Sbjct: 121 RPYTDELAAQFAADCELVRLGSSELVWLAEQKLAGQPVSCSQLEP-ILGEFLQRQ---PD 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 V+VL CTH+PL+ Q+ V +D+ +IARR LL Sbjct: 177 VVVLGCTHFPLLREEIGQVLGPQVRLIDSGAAIARRVSQLL 217 >gi|258622814|ref|ZP_05717831.1| glutamate racemase [Vibrio mimicus VM573] gi|258584875|gb|EEW09607.1| glutamate racemase [Vibrio mimicus VM573] Length = 265 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 123/219 (56%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E++ + DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELEN-----ILHPLKHAIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PLI +Q+ V +D+ +IARR + LL Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 220 >gi|157959995|ref|YP_001500029.1| glutamate racemase [Shewanella pealeana ATCC 700345] gi|189030371|sp|A8GYV7|MURI_SHEPA RecName: Full=Glutamate racemase gi|157844995|gb|ABV85494.1| glutamate racemase [Shewanella pealeana ATCC 700345] Length = 268 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 116/219 (52%), Gaps = 5/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 ILIFDSGIGGL + ++R ++P+ Y+ D+ PYG E+ L K + L + K Sbjct: 5 ILIFDSGIGGLSIFDEIRKVLPDQDCCYLFDNARLPYGELEESVLIKGCVELICEQALKI 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACN+A TL+ LR S+ +G VPAIK AA + + I +L+TP T++R+ Sbjct: 65 DASLVVVACNSASTLVLPGLRERL-SIPIVGVVPAIKPAAKLSIARHIGLLATPGTIKRS 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + C + L S L E G + +++ ++E + D + Sbjct: 124 YTRELIEQFADGCKVELFGSSELVMLAEAKLAGESVDLIKLRAQLE----PIRQSKLDTL 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+P+I +Q+ V LD+ +IA+R LL Sbjct: 180 VLGCTHFPIIASEMQQILGNGVKLLDSGVAIAQRVVFLL 218 >gi|262172913|ref|ZP_06040591.1| glutamate racemase [Vibrio mimicus MB-451] gi|261893989|gb|EEY39975.1| glutamate racemase [Vibrio mimicus MB-451] Length = 265 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 123/219 (56%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E++ + DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELEN-----ILHPLKHTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+PLI +Q+ V +D+ +IARR + LL Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 220 >gi|88861400|ref|ZP_01136029.1| glutamate racemase [Pseudoalteromonas tunicata D2] gi|88816575|gb|EAR26401.1| glutamate racemase [Pseudoalteromonas tunicata D2] Length = 269 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 124/224 (55%), Gaps = 5/224 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 LQ I++FDSGIGG VL+ ++ P + Y+ D++ PYGN L++RL+ + Sbjct: 4 LQPHIVVFDSGIGGTTVLEHIQAAYPFAQYSYLMDNLFMPYGNLTIEVLQQRLLAKLKTV 63 Query: 72 LDKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +++ + + VIACNTA T D LRS + + +G VPAIK A + +G + +L+TP Sbjct: 64 QEQFVKIDIIVIACNTASTQTLDFLRS-YTDIPIVGVVPAIKPACLQSSTGSVGLLATPG 122 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ YT +LI+++ + +HL S L S E+ + D++ +E+E IE+ Sbjct: 123 TIKNVYTQSLINAHSNNVKVHLYGSTRLVSLAEDKFWFGVVSIDDVAEELERLKIEQS-- 180 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTH+P + QL + +D+ +IA R LL Sbjct: 181 -IDHLILGCTHFPFLKSELAQLLSPSMKIIDSGAAIANRVSFLL 223 >gi|312884421|ref|ZP_07744126.1| glutamate racemase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367943|gb|EFP95490.1| glutamate racemase [Vibrio caribbenthicus ATCC BAA-2122] Length = 274 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 114/222 (51%), Gaps = 7/222 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q ILIFDSG+GGL V +++ +P ++ Y+ D+ +PYG E L R+ L + Sbjct: 15 QTKILIFDSGVGGLSVFKEIEAKLPALNYFYIFDNAAYPYGELEHETLTARVETLVCQYV 74 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K L VIACNTA T++ LR+ S+ +G VPAIK A+ I +++TPAT+ Sbjct: 75 KKLDIDLVVIACNTASTIVLPMLRARL-SIPVVGVVPAIKPASNLANKA-IGLIATPATI 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI+ + I ++ S L EE G I E++ + Sbjct: 133 TRQYTRELINDFSQSKPIKMIGSTRLVDMAEEKLRGAAIDLKELEH-----ILGPMKNNI 187 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV VL CTH+PLI + + + V +D+ +IARR LL Sbjct: 188 DVAVLGCTHFPLIKNEIQSVLGSEVLLIDSGVAIARRVESLL 229 >gi|260767618|ref|ZP_05876554.1| glutamate racemase [Vibrio furnissii CIP 102972] gi|260617518|gb|EEX42701.1| glutamate racemase [Vibrio furnissii CIP 102972] gi|315178791|gb|ADT85705.1| glutamate racemase [Vibrio furnissii NCTC 11218] Length = 267 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 77/244 (31%), Positives = 130/244 (53%), Gaps = 8/244 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q LIFDSG+GGL V ++++ +P+ + Y+ D+ +PYG L +R+ L ++++ Sbjct: 6 QYKALIFDSGVGGLSVYREIQTRLPQVSYTYLFDNAAYPYGELAQETLLQRVDMLVTNLV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNTA T++ LR+ ++ +G VPAIK A+ + +++TPAT+ Sbjct: 66 AQQGFDIVVIACNTASTIVLPRLRAKL-AIPVVGVVPAIKPASMLAHKA-VGLIATPATI 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT +LI + S ++ L+ S L EE G + +E+ + + Sbjct: 124 TRQYTHDLIRDFSSDKNVELLGSTRLVDMAEEKLRGKAVDLEEL-----ASILSPLRQHI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV VL CTH+PLI + + V +D+ ++IARR + LL + T + H++F Sbjct: 179 DVAVLGCTHFPLIKEEIQAVLGKDVMLVDSGEAIARRVQDLL-HLETGSMQDEHPHSIFS 237 Query: 253 SGKP 256 S P Sbjct: 238 SAPP 241 >gi|15602782|ref|NP_245854.1| glutamate racemase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431696|sp|P57887|MURI_PASMU RecName: Full=Glutamate racemase gi|12721236|gb|AAK03001.1| MurI [Pasteurella multocida subsp. multocida str. Pm70] Length = 269 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 77/249 (30%), Positives = 129/249 (51%), Gaps = 14/249 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +IL FDSG+GG V ++ + L+P+ H++Y D+ FPY + + +R + + I Sbjct: 6 QPTILFFDSGMGGFSVYKETKQLLPDCHYLYCFDNAFFPYSEKSEEEIIQRTLKICQKID 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA T++ LR+ F ++ +G VPAIK AA +++ I +L+T T+ Sbjct: 66 RTFPLDLIVIACNTASTVVLPALRAHF-AIPVVGTVPAIKPAAECSETKHIGLLATKGTV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R Y ++LI Y C + + S L E+ G + +K+E+ + + Sbjct: 125 KRAYVADLIAQYARDCTVEKLGSTKLVEIAEQKLHGKAVDLHALKQELAPW---QSIQNL 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ----------T 242 D +VL CTH+PLI + P ++D+ +IA R + LL +I+ T Sbjct: 182 DTVVLGCTHFPLIKEEIKWCLPQVRFFVDSGKAIALRVKTLLSKIDIQSKTNEKNLIFCT 241 Query: 243 RVFDDHALF 251 + F+D F Sbjct: 242 QFFEDETQF 250 >gi|91228520|ref|ZP_01262441.1| glutamate racemase [Vibrio alginolyticus 12G01] gi|91187896|gb|EAS74207.1| glutamate racemase [Vibrio alginolyticus 12G01] Length = 204 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 7/193 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLVSRVNQLVSSLV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + L+ S L EE G + DE+ K + + Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGNSVSLDELTK-----ILLPLRDKV 178 Query: 193 DVIVLACTHYPLI 205 DV VL CTH+PLI Sbjct: 179 DVAVLGCTHFPLI 191 >gi|120555141|ref|YP_959492.1| glutamate racemase [Marinobacter aquaeolei VT8] gi|120324990|gb|ABM19305.1| glutamate racemase [Marinobacter aquaeolei VT8] Length = 281 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 121/214 (56%), Gaps = 5/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V + +P +Y+AD+ GFPYG+ + + +R L L ++ Sbjct: 8 VLVFDSGVGGLSVAACIHQTLPGAELVYLADNAGFPYGDKPEQVVIERCCTLIRQCLAQF 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA T++ ELR+ ++ +G VPA+K AAA + + I +L+TPAT++R Sbjct: 68 PCDVVVVACNTASTVVLPELRANI-AVPVVGVVPAVKPAAACSVNRRIGLLATPATVKRA 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y +LI + C + + L EE G D++ E++G + D + Sbjct: 127 YLDDLIQKFARDCEVVRLGHPALVRWAEELVGG--SAPDQV--EVDGAMVPLREAGVDTV 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VL CTHYPL++ R+ P + W+++ ++IARR Sbjct: 183 VLGCTHYPLLLPWLRKALPEVMHWVESGEAIARR 216 >gi|212633112|ref|YP_002309637.1| glutamate racemase [Shewanella piezotolerans WP3] gi|226722989|sp|B8CH57|MURI_SHEPW RecName: Full=Glutamate racemase gi|212554596|gb|ACJ27050.1| Glutamate racemase [Shewanella piezotolerans WP3] Length = 268 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 130/265 (49%), Gaps = 18/265 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ILIFDSGIGGL +L ++R +MP+ Y+ D+ PYG E+ L + L + Sbjct: 1 MSGPILIFDSGIGGLSILDEIRKVMPQQSCCYLFDNARLPYGELEESELISGCVSLIIEQ 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + V+ACN+A TL+ LR S+ +G VPAIK AA ++ I +L+TP T Sbjct: 61 AMRINAGIVVVACNSASTLVLTTLREQL-SIPVVGVVPAIKPAAKISKRRHIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI ++ C + L S L E G + +++E Sbjct: 120 IKRPYTKQLIDAFAEDCRVELFGSSELVMLAEAKLAGTAVD----MQKLELLLAPIRTSE 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-----LPRINTHQTRVFD 246 D +VL CTH+P++ +Q + LD+ ++A R L LP+ T +V D Sbjct: 176 LDTLVLGCTHFPVLATEIKQSLGQSIILLDSGKAVADRVLSLLKGNGLPK--TASNKVVD 233 Query: 247 DHALFLSGKPDIAM----RRLMQGF 267 A+F + DIA R + +GF Sbjct: 234 YSAVFTTD--DIAQGLKKRLVEEGF 256 >gi|261249246|emb|CBG27108.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 250 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 3/207 (1%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y L+VIACNTA Sbjct: 3 VYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYPLSLAVIACNTA 62 Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147 T+ LR F + +G VPAIK AA T +G++ +L+T AT++R YT LI + ++ Sbjct: 63 STVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPYTHELIARFANE 121 Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 C I ++ S L E G + +E+++ + E D +VL CTH+PL+ Sbjct: 122 CQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFPLLRD 179 Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLL 234 Q+ P +D+ +IARR LL Sbjct: 180 ELLQVLPEGTRLVDSGAAIARRTAWLL 206 >gi|33152892|ref|NP_874245.1| glutamate racemase [Haemophilus ducreyi 35000HP] gi|71151975|sp|Q7VKJ3|MURI_HAEDU RecName: Full=Glutamate racemase gi|33149117|gb|AAP96634.1| glutamate racemase [Haemophilus ducreyi 35000HP] Length = 265 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 8/225 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL V ++R +P H++Y D+ FPY L +R + + Sbjct: 1 MKPTILLYDSGMGGLTVYDEIRKKLPNAHYLYYFDNACFPYSEKPTEVLVERATKMVQKM 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 Y L V+ACNTA T++ LR FP +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AKNYPLDLVVVACNTASTVVLPTLRKIFP-FPIVGTVPAIKPAAALSQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGK 190 + R Y +LI Y C I + S L VE+ K++ I + + + Sbjct: 120 ITRPYVLSLIEQYAPNCQIEKIGSTALVELVEQ-----KLQTGVIDLTRLTPIIADWQNH 174 Query: 191 RT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 T D ++L CTH+P+ +QL P +LD+ ++IA R L+ Sbjct: 175 PTLDTVILGCTHFPMAKTELQQLLPNVKYFLDSGNAIANRVTHLI 219 >gi|311693694|gb|ADP96567.1| glutamate racemase [marine bacterium HP15] Length = 277 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 13/262 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + +P +Y+AD+ GFPYG + + R L + L+ Y Sbjct: 1 MFDSGVGGLSVAACIHRQLPGLEIVYLADNAGFPYGEKSEAVVIDRCCSLITRALELYPS 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ACNTA T++ LR+ ++ +G VPAIK AAA + + + +L+TPAT+RR Y Sbjct: 61 DAIVVACNTASTVVLPHLRA-MTAVPVVGVVPAIKPAAAKSVNRRMGLLATPATVRRPYL 119 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L+ + C I + L E+ GI++ E+ + + F E D +VL Sbjct: 120 DRLVEEFAGDCRIERIGHPGLVRWAEDLVSGIEVPLAELSEAMR-PFKEAG---VDTVVL 175 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDD-----HA 249 CTHYPL++ R P W+D+ ++IARR LL R++ Q V A Sbjct: 176 GCTHYPLLLESLRASLPTVRFWVDSGEAIARRVAWLLEQTGRLDVAQGPVASAGKQPVSA 235 Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271 SG + M G GL++ Sbjct: 236 ALFSGPAPKGIAPFMAGLGLEA 257 >gi|127511073|ref|YP_001092270.1| glutamate racemase [Shewanella loihica PV-4] gi|166231053|sp|A3Q963|MURI_SHELP RecName: Full=Glutamate racemase gi|126636368|gb|ABO22011.1| glutamate racemase [Shewanella loihica PV-4] Length = 266 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 132/261 (50%), Gaps = 9/261 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +IL+FDSG+GGL +L +R +P ++ Y+ D+ PYG ++ L + + L S Sbjct: 1 MSANILVFDSGVGGLSILAAVREQLPSANYCYLFDNARLPYGELDEQELIQGCVTLISQA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + Q + V+ACN+A TLI LR+ + +G VPAIK AAA +Q + +L+TP T Sbjct: 61 VIQCQADIVVVACNSASTLILPALRACL-KVPVVGVVPAIKPAAALSQKKHLGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-IEGCFIEKEGK 190 + R YT +LI + S C + S L E+ K+ + + E + + Sbjct: 120 VNRQYTQDLIDQFASDCRVDRFGSSELVYLAED-----KMAQRPVDSEALHRILAPIKAS 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D ++L CTH+P++ + V LD+S++IA R LL + + AL Sbjct: 175 GLDTLILGCTHFPILREELQSYLGEGVHLLDSSNAIAARVVSLLE--PSMSGEIGKSQAL 232 Query: 251 FLSGKPDIAMRRLMQGFGLKS 271 + + +R+ + +G +S Sbjct: 233 YTTDSICEGLRKTLAAWGFRS 253 >gi|320159866|ref|YP_004173090.1| glutamate racemase [Anaerolinea thermophila UNI-1] gi|319993719|dbj|BAJ62490.1| glutamate racemase [Anaerolinea thermophila UNI-1] Length = 273 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 16/253 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R LMP IY+AD PYG ++ + ++ + Sbjct: 2 IGVFDSGVGGLSVLRAIRALMPAEPVIYLADQAHVPYGPRPLEEVRGFSQSIARFLIAQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ V+ACNTA LR TFP F+G PA+K AA TQSG++ +L+TPAT + Sbjct: 62 ARVI-VVACNTASAAALFHLRQTFPETPFVGMEPAVKPAAETTQSGVVGVLATPATFQGA 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 ++++ + + + L ++E + +E ++ +E + + D + Sbjct: 121 LYASVVERFAQGVTLLQDTCAGLVQQIEAG----NLAGEETRRILENALLPMLARGMDTV 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 V+ CTHYP ++ + +Q+ V +D + ++AR+ R RV + H + G Sbjct: 177 VMGCTHYPFVIPLIQQIVGEQVRVIDPAPAVARQTR-----------RVLEAHGWLVEGN 225 Query: 256 PDIAMRRLMQGFG 268 +R L G G Sbjct: 226 QPAPVRFLTTGDG 238 >gi|332159762|ref|YP_004296339.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603894|emb|CBY25392.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica Y11] gi|325663992|gb|ADZ40636.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 240 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 12/241 (4%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 MP+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L Sbjct: 1 MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 60 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S Sbjct: 61 RERF-TFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTQDLIERFATDCKIELLGS 119 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 L E G + ++ +KK + +E D IVL CTH+PL+ Q+ P Sbjct: 120 SELVELAETKLHGGVVPKEALKKILHPWLAMREPP--DTIVLGCTHFPLLTEELAQVLPE 177 Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDD-----HALFLSGKPDIAMRRLMQGFGLK 270 +D+ +IARR L I++ + + D + + L+ D A+ ++QG+G Sbjct: 178 GTRMVDSGAAIARRTAWL---ISSQENMISSDEENIAYCMALNADTD-ALLPVLQGYGFP 233 Query: 271 S 271 S Sbjct: 234 S 234 >gi|52425789|ref|YP_088926.1| glutamate racemase [Mannheimia succiniciproducens MBEL55E] gi|52307841|gb|AAU38341.1| MurI protein [Mannheimia succiniciproducens MBEL55E] Length = 271 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 128/243 (52%), Gaps = 5/243 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 +++ +IL FDSG+GG V ++++ L+P H++Y D+ FPY + + +R + + Sbjct: 6 EIKPTILFFDSGVGGFSVYKEVKQLLPNAHYLYCFDNAFFPYSEKSEEVIIERTLTVCKK 65 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 I ++Y VIACNTA T++ LR F ++ +G VPAIK AA +Q+ I +L+T Sbjct: 66 INEQYPLDAIVIACNTASTVVLPTLRQHF-AIPIIGTVPAIKPAAEKSQTKHIGLLATKG 124 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++RTY ++LI Y C + + S LA E G + ++ E+ + Sbjct: 125 TVKRTYVTSLIERYAQDCIVEKIGSTKLAEIAERKLHGESVDLIALRNELTPWI---QLS 181 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D ++L CTH+PLI + P + + +IA+R LL I T + + D+ + Sbjct: 182 DLDSVILGCTHFPLIKEEIQLCLPQVKFYFEPGTAIAKRVFDLLAGI-TPKDKTETDNCI 240 Query: 251 FLS 253 F + Sbjct: 241 FYT 243 >gi|145633451|ref|ZP_01789181.1| glutamate racemase [Haemophilus influenzae 3655] gi|229845418|ref|ZP_04465548.1| glutamate racemase [Haemophilus influenzae 6P18H1] gi|144986014|gb|EDJ92616.1| glutamate racemase [Haemophilus influenzae 3655] gi|229811614|gb|EEP47313.1| glutamate racemase [Haemophilus influenzae 6P18H1] Length = 269 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKSASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYVDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGTAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|167855237|ref|ZP_02478006.1| glutamate racemase [Haemophilus parasuis 29755] gi|167853601|gb|EDS24846.1| glutamate racemase [Haemophilus parasuis 29755] Length = 256 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 8/251 (3%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL + +R +P+ H++Y D+ FPY + L +R + + I + Y + V+ Sbjct: 1 MGGLTIYDAIRENLPDAHYLYCFDNAYFPYSEKSEAVLIERAVGIVQKIAENYPLDMVVV 60 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 ACNTA T++ LR F +M +G VPAIK AA +Q+ I +L+T T+ R Y LI Sbjct: 61 ACNTASTVVLPALRERF-AMPIVGTVPAIKPAAQISQTKTIGLLATKGTVTRPYVDELIE 119 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DVIVLACTH 201 Y C + + S L VEE + ++K + E + T D ++L CTH Sbjct: 120 RYAKDCVVERIGSTDLVEIVEEKQQTGSVDMQRLQKVV----AEWQSHPTLDTVILGCTH 175 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMR 261 +PL+ +QL P ++D+ + IA R LL + + ++ F + + ++ Sbjct: 176 FPLVKEELQQLLPRVSFFVDSGNRIANRVVSLLQDVKRNVNNENKENQAFCTQNSEDFLK 235 Query: 262 R--LMQGFGLK 270 R +MQ +G K Sbjct: 236 REKVMQNWGFK 246 >gi|77359223|ref|YP_338798.1| glutamate racemase [Pseudoalteromonas haloplanktis TAC125] gi|76874134|emb|CAI85355.1| glutamate racemase [Pseudoalteromonas haloplanktis TAC125] Length = 265 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 77/232 (33%), Positives = 119/232 (51%), Gaps = 5/232 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I++FDSGIGG VL+ ++ +P+ + Y D+ PYG + RL L I + Sbjct: 5 IMVFDSGIGGTTVLEHIQQSIPDAQYSYFMDNALLPYGAQSQQTIINRLCALIHFINQQA 64 Query: 76 QPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V L VIACNTA T +R ++ +G VPAIK AA TQS I +L+TPAT+ Sbjct: 65 LNVDLIVIACNTASTSALGAVRQ-ITTIPIVGVVPAIKPAAQLTQSKHIGLLATPATISS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + + + L SS+ L + E + ++ +E++ I++ DV Sbjct: 124 PYTRTLIQEHTNNIAVSLYSSVELVTLAERLFFEQSLDTTKLHQELDRLNIDQS---IDV 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 +VL CTH+P++ Q V LD+ +IA+R L+ ++N + D Sbjct: 181 LVLGCTHFPILAEPISQYFNRKVQLLDSGAAIAKRVHYLISQLNLTNNNIAD 232 >gi|68250338|ref|YP_249450.1| glutamate racemase [Haemophilus influenzae 86-028NP] gi|81335242|sp|Q4QJK7|MURI_HAEI8 RecName: Full=Glutamate racemase gi|68058537|gb|AAX88790.1| glutamate racemase [Haemophilus influenzae 86-028NP] Length = 269 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-EIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGMAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|145641879|ref|ZP_01797454.1| glutamate racemase [Haemophilus influenzae R3021] gi|145273501|gb|EDK13372.1| glutamate racemase [Haemophilus influenzae 22.4-21] Length = 269 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKSASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYVDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|149192517|ref|ZP_01870697.1| glutamate racemase [Vibrio shilonii AK1] gi|148833649|gb|EDL50706.1| glutamate racemase [Vibrio shilonii AK1] Length = 266 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 124/223 (55%), Gaps = 9/223 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +ILIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R L ++ Sbjct: 3 RKNILIFDSGVGGLSVFKEIVQRLPQENYIYLFDNEAYPYGELAPETLVNRTCTLIQQMM 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNTA T++ LR + +G VPAIK A+ +++ + +++TPAT+ Sbjct: 63 RRKAVDIVVIACNTASTIVLPHLRKRI-DIPVVGVVPAIKPASLLSKTA-VGLIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKR 191 R YT +LI ++ + + L+ L E+ K++ +++ +E+E +GK Sbjct: 121 TRQYTHDLIRNFATDKEVKLIGDSRLVEMAEQ-----KLRNEQVDLQELELILSPIKGK- 174 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV VL CTH+PLI + V+ +D+ +IARR LL Sbjct: 175 IDVAVLGCTHFPLIKEEIALVLGDCVELVDSGAAIARRVESLL 217 >gi|145630715|ref|ZP_01786494.1| glutamate racemase [Haemophilus influenzae R3021] gi|144983841|gb|EDJ91291.1| glutamate racemase [Haemophilus influenzae R3021] Length = 269 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSECEEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|119472793|ref|ZP_01614730.1| glutamate racemase [Alteromonadales bacterium TW-7] gi|119444752|gb|EAW26057.1| glutamate racemase [Alteromonadales bacterium TW-7] Length = 261 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 5/219 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI-LDKY 75 ++FDSGIGG VL ++ +P + Y D+ PYG + RL L I L+K Sbjct: 1 MVFDSGIGGTTVLDHIKQRIPNAQYSYFMDNAFLPYGAQTQQTIINRLCSLIHFIKLNKL 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA T +R + +G VPAIK AA T+S I++L+TPAT+ + Sbjct: 61 NVDLIVIACNTASTSALSAVRK-ITDIPIVGVVPAIKPAAELTRSNHIALLATPATIASS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT+ LI + S ++L SS+ L + E + +++ +EG IEK+ TDV+ Sbjct: 120 YTNKLIAQHASNVTVNLYSSVELVNLAELLFFNGYLDTNKLHAVLEGLNIEKQ---TDVL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+P++ + + +D+ +IA R LL Sbjct: 177 VLGCTHFPILTKQISEHFKNSIQLVDSGAAIANRVIYLL 215 >gi|148655659|ref|YP_001275864.1| glutamate racemase [Roseiflexus sp. RS-1] gi|189030367|sp|A5UTG1|MURI_ROSS1 RecName: Full=Glutamate racemase gi|148567769|gb|ABQ89914.1| glutamate racemase [Roseiflexus sp. RS-1] Length = 272 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 11/230 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGG+ VL+++R L+P + +Y+AD PYG+ L+ + ++ + Sbjct: 9 IGLFDSGIGGMTVLREVRRLLPGENLLYLADQARCPYGSRSPDELRAIAAACAAWLIARG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +LR FP++ F+G VP +K AA+ T+SG++ +L+TPATL Sbjct: 69 AK-LVVVACNTASAAALADLRRRFPAIPFVGMVPPVKPAASRTRSGVVGVLATPATLAGD 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 ++I + H+ + L ++EE A + E + G D I Sbjct: 128 LLHDVISRWAEGVHVIEQACPGLVEQIEEGA----LDSPETMALLRGYVTPLLDAGADTI 183 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA------RCLLPRINT 239 VL CTHYPL+V R ++ LD + ++A+R R L+ +NT Sbjct: 184 VLGCTHYPLLVPQLRAIAGDDTLILDAAPAVAQRVAQIVQERGLMRNVNT 233 >gi|238794886|ref|ZP_04638485.1| Glutamate racemase [Yersinia intermedia ATCC 29909] gi|238725761|gb|EEQ17316.1| Glutamate racemase [Yersinia intermedia ATCC 29909] Length = 241 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 109/200 (54%), Gaps = 3/200 (1%) Query: 35 LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94 ++P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T++ Sbjct: 1 MLPDLHYIYAFDNVAFPYGEKSGEFIIERVLEIVTAVQQRHPLAIVVIACNTASTVVLPA 60 Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154 LR F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ Sbjct: 61 LRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTRDLIERFATDCKIELLG 119 Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 S L E G + + +KK + +E D IVL CTH+PL+V Q+ P Sbjct: 120 SSELVELAESKLHGGAVPIETLKKILHPWLAMREPP--DTIVLGCTHFPLLVEELAQVLP 177 Query: 215 WPVDWLDNSDSIARRARCLL 234 +D+ +IARR L+ Sbjct: 178 EGTRMVDSGAAIARRTAWLI 197 >gi|260580700|ref|ZP_05848527.1| glutamate racemase [Haemophilus influenzae RdAW] gi|260092762|gb|EEW76698.1| glutamate racemase [Haemophilus influenzae RdAW] Length = 269 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGMAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|148827156|ref|YP_001291909.1| glutamate racemase [Haemophilus influenzae PittGG] gi|166231038|sp|A5UFH0|MURI_HAEIG RecName: Full=Glutamate racemase gi|148718398|gb|ABQ99525.1| glutamate racemase [Haemophilus influenzae PittGG] Length = 269 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGMAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|222837977|gb|EEE76342.1| predicted protein [Populus trichocarpa] Length = 602 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 120/237 (50%), Gaps = 13/237 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA-LKKRLMFLFSDIL 72 + I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ A +++R + + Sbjct: 312 SPIGVFDSGIGGLSVLQALRHELPHERFVYLADSGNAPYGDARGDAFVQQRTRTIARHLR 371 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA D LR+ P + +G PAIK A+ +Q+G + +++T T+ Sbjct: 372 EQHQIKVLVIACNTATAAAVDMLRAEMPELPLIGVEPAIKPASLSSQTGHVGVMATRGTV 431 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182 + L+ + + H+ LA +EE + + D + E+ G Sbjct: 432 SSARFARLVAEHGQRVQFHVQPCDGLAKAIEE-STEQPVPADPMATEVAQLCARYVNALG 490 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 F +K G+ D +VL CTHY R L + ++D +AR+ R +L R+ T Sbjct: 491 SFGQKTGE-MDSLVLGCTHYIFAREQLRTLLGPDIQFIDTGAPVARQTRRVLDRLGT 546 >gi|160898092|ref|YP_001563674.1| glutamate racemase [Delftia acidovorans SPH-1] gi|160363676|gb|ABX35289.1| glutamate racemase [Delftia acidovorans SPH-1] Length = 296 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 120/237 (50%), Gaps = 13/237 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA-LKKRLMFLFSDIL 72 + I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ A +++R + + Sbjct: 6 SPIGVFDSGIGGLSVLQALRHELPHERFVYLADSGNAPYGDARGDAFVQQRTRTIARHLR 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA D LR+ P + +G PAIK A+ +Q+G + +++T T+ Sbjct: 66 EQHQIKVLVIACNTATAAAVDMLRAEMPELPLIGVEPAIKPASLSSQTGHVGVMATRGTV 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182 + L+ + + H+ LA +EE + + D + E+ G Sbjct: 126 SSARFARLVAEHGQRVQFHVQPCDGLAKAIEE-STEQPVPADPMATEVAQLCARYVNALG 184 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 F +K G+ D +VL CTHY R L + ++D +AR+ R +L R+ T Sbjct: 185 SFGQKTGE-MDSLVLGCTHYIFAREQLRTLLGPDIQFIDTGAPVARQTRRVLDRLGT 240 >gi|238760127|ref|ZP_04621275.1| Glutamate racemase [Yersinia aldovae ATCC 35236] gi|238701625|gb|EEP94194.1| Glutamate racemase [Yersinia aldovae ATCC 35236] Length = 241 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 4/238 (1%) Query: 35 LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94 ++P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ Sbjct: 1 MLPDLHYIYAFDNVAFPYGEKSGEFIIERVVEIVTAVQQRHPLAIVVIACNTASTVSLPA 60 Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154 LR F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ Sbjct: 61 LRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTRDLIERFATDCKIELLG 119 Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 S L E G + ++ +KK + +E D IVL CTH+PL+ Q+ P Sbjct: 120 SSELVELAETKLHGGVVPQEALKKILHPWLAMREPP--DTIVLGCTHFPLLTEELAQVLP 177 Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271 +D+ +IARR L+ + ++ A ++ D A+ ++QG+G + Sbjct: 178 EGTRMVDSGAAIARRTAWLISSQENVVSSQDENIAYCMALNADTDALLPVLQGYGFPT 235 >gi|238785771|ref|ZP_04629743.1| Glutamate racemase [Yersinia bercovieri ATCC 43970] gi|238713305|gb|EEQ05345.1| Glutamate racemase [Yersinia bercovieri ATCC 43970] Length = 241 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 4/238 (1%) Query: 35 LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94 ++P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ Sbjct: 1 MLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPA 60 Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154 LR F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ Sbjct: 61 LRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTLDLIARFATDCKIELLG 119 Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 S L E G + + +KK + +E D IVL CTH+PL+ Q+ P Sbjct: 120 SSELVELAESKLHGGVVSVEALKKILHPWLAMREPP--DTIVLGCTHFPLLAEELAQVLP 177 Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271 +D+ +IARR L+ + ++ A ++ D A+ ++QG+G ++ Sbjct: 178 EGTRMVDSGAAIARRTAWLISSQENVVSSQDENMAYCMALNTDTDALLPVLQGYGFQT 235 >gi|16273625|ref|NP_439883.1| glutamate racemase [Haemophilus influenzae Rd KW20] gi|6166587|sp|P52973|MURI_HAEIN RecName: Full=Glutamate racemase gi|3212239|gb|AAC23386.1| glutamate racemase (murI) [Haemophilus influenzae Rd KW20] Length = 269 Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGMAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P +++ S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMEPSAAIAKRIKYLLDDKN 228 >gi|195937619|ref|ZP_03083001.1| glutamate racemase [Escherichia coli O157:H7 str. EC4024] Length = 143 Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 91/140 (65%), Gaps = 1/140 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+ Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119 Query: 136 YTSNLIHSYVSQCHIHLVSS 155 YT LI + ++C I ++ S Sbjct: 120 YTHELIARFANECQIEMLGS 139 >gi|297539329|ref|YP_003675098.1| glutamate racemase [Methylotenera sp. 301] gi|297258676|gb|ADI30521.1| glutamate racemase [Methylotenera sp. 301] Length = 283 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 6/255 (2%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 +K + P K ++ I +FDSG+GG+ VL+ ++ L+P +YVAD PYGN + Sbjct: 6 IKSNETPVNKPIEKPIAVFDSGVGGISVLKHIQALLPNEQLLYVADSKYAPYGNKTAAEI 65 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + R + ++ K L V+ACNTA D LR + S+ +G PA+K AA +++ Sbjct: 66 QARCFEIAEFLMAKDAKAL-VVACNTATAAAIDSLRERY-SLPIIGMEPAVKPAAEASRN 123 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G+I +L+T TL+ + L+ SY + + + L +E ++ D K I Sbjct: 124 GIIGVLATTGTLKSAQFAGLLESYGRNVKVVTQACVGLVECIERG----ELDADNTKMLI 179 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + D IVL CTHYP + H+ Q+ V +D ++A++ + L Sbjct: 180 QQYCAPLLAEGADTIVLGCTHYPFVRHLIEQVVGANVALIDTGAAVAKQLKRQLEEKGLL 239 Query: 241 QTRVFDDHALFLSGK 255 R + A F K Sbjct: 240 SNRTAEADAQFSKSK 254 >gi|148825723|ref|YP_001290476.1| glutamate racemase [Haemophilus influenzae PittEE] gi|229846914|ref|ZP_04467020.1| glutamate racemase [Haemophilus influenzae 7P49H1] gi|166231037|sp|A5UBE2|MURI_HAEIE RecName: Full=Glutamate racemase gi|148715883|gb|ABQ98093.1| glutamate racemase [Haemophilus influenzae PittEE] gi|229809998|gb|EEP45718.1| glutamate racemase [Haemophilus influenzae 7P49H1] Length = 269 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY E+ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSEREEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|315125844|ref|YP_004067847.1| glutamate racemase [Pseudoalteromonas sp. SM9913] gi|315014358|gb|ADT67696.1| glutamate racemase [Pseudoalteromonas sp. SM9913] Length = 262 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 111/220 (50%), Gaps = 5/220 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I++FDSGIGG VL+ ++ +P + Y D+ PYG + RL L I D+ Sbjct: 5 IMVFDSGIGGTTVLEHIQQSIPHAQYSYFMDNALLPYGAQSQQTIIHRLCGLIQFIEDES 64 Query: 76 QPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V L VIACNTA T +R + +G VPAIK AA TQS I +L+TPAT+ Sbjct: 65 LNVDLIVIACNTASTSALSSVRQ-ITDIPIVGVVPAIKPAAQLTQSKHIGLLATPATVSS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT LI + S L SS+ L + E + D++ E++ I K+ DV Sbjct: 124 PYTDALIKEHASSITTSLYSSVELVTLAETLFFTQHLDIDKLHTELDRLNINKD---IDV 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+P++ V LD+ +IA+R LL Sbjct: 181 LVLGCTHFPILAKPISDYFNTQVQLLDSGAAIAKRVSSLL 220 >gi|213420373|ref|ZP_03353439.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 156 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/148 (39%), Positives = 93/148 (62%), Gaps = 1/148 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVE 163 YT LI + ++C I ++ S L E Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAE 147 >gi|307719381|ref|YP_003874913.1| glutamate racemase [Spirochaeta thermophila DSM 6192] gi|306533106|gb|ADN02640.1| glutamate racemase [Spirochaeta thermophila DSM 6192] Length = 286 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 116/218 (53%), Gaps = 11/218 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L DSGIGG+ L + F+YVAD FPYG L+ L+ L +D+L ++ Sbjct: 28 VLFLDSGIGGIPYLLWALEHIEGEEFVYVADRAHFPYGPRSHEELEAILVDLVADLLRRF 87 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P L V+ACNTA + LR+ + + F+G VPAIK AA+ T++G++ +L+T TLR Sbjct: 88 RPKLVVLACNTASVVGLPALRARY-EIPFVGVVPAIKPAASLTRTGVVGLLATERTLRDF 146 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE----IKKEIEGCFIEKEGKR 191 YT LI +Y + + V S + VE I E+E +++ +E C + Sbjct: 147 YTDELIAAYANGARVVKVPSPHIVEFVEHRF--IDAAEEERRTAVREAVERCVAQG---- 200 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D IVL CTH+ + R L+ V +D+ + + RR Sbjct: 201 ADTIVLGCTHFVFLEAQIRSLAGEHVQVIDSREGVGRR 238 >gi|145639716|ref|ZP_01795319.1| glutamate racemase [Haemophilus influenzae PittII] gi|145271273|gb|EDK11187.1| glutamate racemase [Haemophilus influenzae PittII] gi|309750685|gb|ADO80669.1| Glutamate racemase [Haemophilus influenzae R2866] Length = 269 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AD 178 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|146306097|ref|YP_001186562.1| glutamate racemase [Pseudomonas mendocina ymp] gi|167017319|sp|A4XR64|MURI_PSEMY RecName: Full=Glutamate racemase gi|145574298|gb|ABP83830.1| glutamate racemase [Pseudomonas mendocina ymp] Length = 263 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 5/222 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q + +FDSG+GGL VL+++R L+P +YVAD PYG +++R + + +L Sbjct: 5 QAPVGVFDSGVGGLSVLREIRQLLPNESLLYVADSGHVPYGEKSAEYIRERCVLITEHLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA ELR +P + +G PA+K AAA T+SG++ +L+T TL Sbjct: 65 AQGAKAL-VLACNTATAAAAAELRERYPQLPIVGMEPAVKPAAAATRSGVVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L +E A + ++ +E E Sbjct: 124 KSAKFAALLDRFASDVRVITQPCPGLVECIEAGALQAPATRELLQGYVEPLLAEG----C 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYP + + L P V +D ++AR+ + LL Sbjct: 180 DTLILGCTHYPFLKPLLHSLVPDSVSLIDTGAAVARQLQRLL 221 >gi|319776733|ref|YP_004139221.1| glutamate racemase [Haemophilus influenzae F3047] gi|329123156|ref|ZP_08251726.1| glutamate racemase [Haemophilus aegyptius ATCC 11116] gi|317451324|emb|CBY87562.1| glutamate racemase [Haemophilus influenzae F3047] gi|327471711|gb|EGF17153.1| glutamate racemase [Haemophilus aegyptius ATCC 11116] Length = 269 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGMAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|224367637|ref|YP_002601800.1| MurI [Desulfobacterium autotrophicum HRM2] gi|223690353|gb|ACN13636.1| MurI [Desulfobacterium autotrophicum HRM2] Length = 283 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 6/226 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GG+ VL+ +R L+P+ IYVAD PYGN ++ R + +L+K Sbjct: 25 VFDSGVGGVSVLKWIRQLLPQEDLIYVADKGYAPYGNKSSDYVRDRAAHITRFLLEKRVK 84 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V+ACNTA LRS F + F+G P ++ A T+SG+I +L+T TLR T Sbjct: 85 AV-VVACNTATVTAITTLRSMF-KVPFIGIEPGVRPALNATRSGVIGVLATTETLRSTSF 142 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + LI + + + L +VE A E +K +E + K D IVL Sbjct: 143 NALIQRFCKDIRVEVQECPGLMEQVESMA----FTTPETRKLLERYLVPLLEKGADTIVL 198 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 CTHYP +V + R+++ + ++ ++++R+ +L ++ TR Sbjct: 199 GCTHYPFLVPLVREMAGQEIRIIETGEAVSRQVMRILTTMDLLTTR 244 >gi|260582090|ref|ZP_05849885.1| glutamate racemase [Haemophilus influenzae NT127] gi|260094980|gb|EEW78873.1| glutamate racemase [Haemophilus influenzae NT127] Length = 269 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYLLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AD 178 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|309972870|gb|ADO96071.1| Glutamate racemase [Haemophilus influenzae R2846] Length = 269 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QIINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|332535187|ref|ZP_08410994.1| glutamate racemase [Pseudoalteromonas haloplanktis ANT/505] gi|332035406|gb|EGI71906.1| glutamate racemase [Pseudoalteromonas haloplanktis ANT/505] Length = 266 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 115/224 (51%), Gaps = 5/224 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I++FDSGIGG VL+ ++ +P + Y D+ PYG + RL L I Sbjct: 5 IMVFDSGIGGTTVLEHIKQSIPNAQYSYFMDNALLPYGAQSQQTIINRLCSLIHFIKANT 64 Query: 76 QPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V L VIACNTA T +R + +G VPAIK AA T+S I +L+TPAT+ Sbjct: 65 LNVDLIVIACNTASTSALSAVRQ-ITDIPIVGVVPAIKPAAELTRSNHIGLLATPATVAS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +YT LI + ++L SS+ L + EE + +++ + ++ I+ K DV Sbjct: 124 SYTKTLIAEHARNVIVNLYSSVELVTLAEECFFTGSLDTNKLYQVLDELHID---KTIDV 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +VL CTH+P++ Q V LD+ +IA R LL ++N Sbjct: 181 LVLGCTHFPILAGPISQYFEGNVKLLDSGVAIANRVNFLLNQLN 224 >gi|121605775|ref|YP_983104.1| glutamate racemase [Polaromonas naphthalenivorans CJ2] gi|120594744|gb|ABM38183.1| glutamate racemase [Polaromonas naphthalenivorans CJ2] Length = 272 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 84/274 (30%), Positives = 129/274 (47%), Gaps = 23/274 (8%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I +FDSGIGGL VL+ +R MP HFIY+AD PYG + + R + + Sbjct: 1 MDRAIGVFDSGIGGLSVLKALRAAMPHEHFIYIADSGHAPYGERDVAHVLARSRAIVQYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ L V+ACNTA LR+ P +A +G PA+K AA TQ+G I +++T +T Sbjct: 61 VNQNVKAL-VMACNTATAAAIHLLRTEHPGLALIGVEPALKPAAGRTQTGRIGVMATRST 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGC--FIEK 187 L L+ + + + A I+ D + + I C +I Sbjct: 120 LASAKFQALLAAQSGGPQ----KVEFIVQPCDGLAHAIEASADTGDATRTIALCAHYISA 175 Query: 188 EGK------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RI 237 G+ + D +VL CTHYP R L V ++DN +++AR+ LLP Sbjct: 176 MGRFGTETGQIDTLVLGCTHYPFASEHLRALVGAQVQFIDNGEAVARQTLRLLPASVMAA 235 Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 N RV +LF +G+PD + GL + Sbjct: 236 NAPPGRV----SLFTTGQPDTLQAAAQRWLGLSA 265 >gi|301170494|emb|CBW30101.1| glutamate racemase [Haemophilus influenzae 10810] Length = 269 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|319898188|ref|YP_004136385.1| glutamate racemase [Haemophilus influenzae F3031] gi|317433694|emb|CBY82082.1| glutamate racemase [Haemophilus influenzae F3031] Length = 269 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLSAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y L+ + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELVDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228 >gi|315186198|gb|EFU19960.1| glutamate racemase [Spirochaeta thermophila DSM 6578] Length = 286 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 83/268 (30%), Positives = 136/268 (50%), Gaps = 17/268 (6%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 PC +L DSGIGG+ L + F+YVAD FPYG L+ L+ Sbjct: 24 PC-----RPVLFLDSGIGGIPYLLWALNHIEGEEFVYVADRAHFPYGPRSHEELEAILVD 78 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 L + +L +++P L V+ACNTA + LR+ + ++ F+G VPAIK AA+ T++G++ +L Sbjct: 79 LVAGLLRRFRPKLVVLACNTASVVGLPALRARY-AIPFVGVVPAIKPAASLTRTGVVGLL 137 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY---ACGIKIKEDEIKKEIEGC 183 +T TLR YT LI +Y + + V S + VE A G + + +++ ++ C Sbjct: 138 ATERTLRDFYTDELIATYANGARVVKVPSPHIVEFVEHRFIDASG-EERRTAVREAVDRC 196 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + D IVL CTH+ + R L+ V +D+ + + RR LL + + R Sbjct: 197 VAQG----ADTIVLGCTHFVFLEAQIRSLAGEHVQVIDSREGVGRRLGHLLSYLPCGR-R 251 Query: 244 VFDDHALFLSGK--PDIAMRRLMQGFGL 269 + +L+G+ P+ R + +GL Sbjct: 252 GPSTASFYLTGRTPPEGRYLRFTRHYGL 279 >gi|162420811|ref|YP_001604760.1| glutamate racemase [Yersinia pestis Angola] gi|165928375|ref|ZP_02224207.1| glutamate racemase [Yersinia pestis biovar Orientalis str. F1991016] gi|165936981|ref|ZP_02225547.1| glutamate racemase [Yersinia pestis biovar Orientalis str. IP275] gi|166009624|ref|ZP_02230522.1| glutamate racemase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213755|ref|ZP_02239790.1| glutamate racemase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401233|ref|ZP_02306733.1| glutamate racemase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420886|ref|ZP_02312639.1| glutamate racemase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425952|ref|ZP_02317705.1| glutamate racemase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|270488739|ref|ZP_06205813.1| glutamate racemase [Yersinia pestis KIM D27] gi|294505559|ref|YP_003569621.1| glutamate racemase [Yersinia pestis Z176003] gi|162353626|gb|ABX87574.1| glutamate racemase [Yersinia pestis Angola] gi|165915223|gb|EDR33834.1| glutamate racemase [Yersinia pestis biovar Orientalis str. IP275] gi|165919605|gb|EDR36938.1| glutamate racemase [Yersinia pestis biovar Orientalis str. F1991016] gi|165991546|gb|EDR43847.1| glutamate racemase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205157|gb|EDR49637.1| glutamate racemase [Yersinia pestis biovar Antiqua str. B42003004] gi|166961015|gb|EDR57036.1| glutamate racemase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049258|gb|EDR60666.1| glutamate racemase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055100|gb|EDR64899.1| glutamate racemase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|262363626|gb|ACY60347.1| glutamate racemase [Yersinia pestis D106004] gi|262367556|gb|ACY64113.1| glutamate racemase [Yersinia pestis D182038] gi|270337243|gb|EFA48020.1| glutamate racemase [Yersinia pestis KIM D27] gi|294356018|gb|ADE66359.1| glutamate racemase [Yersinia pestis Z176003] Length = 240 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 3/199 (1%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 MP+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L Sbjct: 1 MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 60 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 R F + +G VPAIK A T++G++ +L+T AT+ +YT +LI + + C I L+ S Sbjct: 61 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGS 119 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 L E G + + +KK + +E D IVL CTH+PL+ Q+ P Sbjct: 120 SELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DTIVLGCTHFPLLTEELAQVLPE 177 Query: 216 PVDWLDNSDSIARRARCLL 234 +D+ +IARR L+ Sbjct: 178 GTRMVDSGAAIARRTAWLI 196 >gi|257464953|ref|ZP_05629324.1| glutamate racemase [Actinobacillus minor 202] gi|257450613|gb|EEV24656.1| glutamate racemase [Actinobacillus minor 202] Length = 253 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 6/251 (2%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL + ++R ++P H++Y D+ FPY + AL +R + + I +K L V+ Sbjct: 1 MGGLTIYDEVRKVLPNAHYLYCFDNAFFPYSERSEQALIERAVKIVQKIAEKQPLDLVVV 60 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 ACNTA T++ LR F +G VPAIK AAA +++ I +L+T T++R Y +LIH Sbjct: 61 ACNTASTVVLPALREHF-DFPIVGTVPAIKPAAAISKTKTIGLLATVGTIKRPYVLDLIH 119 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 Y C + + + + E + +K+ +E D ++L CTH+ Sbjct: 120 RYAKDCQVEKIGNTQIVELAETKLLTGTVDLPSLKECVEPWL---NHPSLDTVILGCTHF 176 Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262 PL+ +QL P ++D+ ++IA+R + LL + H ++ F + + R Sbjct: 177 PLLKEELKQLLPQVTYFVDSGEAIAKRVQSLLLENHHHSQEKERENTAFCTELTENFKNR 236 Query: 263 --LMQGFGLKS 271 +M G KS Sbjct: 237 EVMMHKLGFKS 247 >gi|213583010|ref|ZP_03364836.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 135 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 88/135 (65%), Gaps = 1/135 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119 Query: 136 YTSNLIHSYVSQCHI 150 YT LI + ++C I Sbjct: 120 YTHELIARFANECQI 134 >gi|325286852|ref|YP_004262642.1| Glutamate racemase [Cellulophaga lytica DSM 7489] gi|324322306|gb|ADY29771.1| Glutamate racemase [Cellulophaga lytica DSM 7489] Length = 263 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 49/276 (17%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I +FDSG+GG + +++ L+P + IY+AD PYG + RL +++L Sbjct: 3 NNPIGVFDSGVGGTSIWKEIHKLLPLENTIYLADSANAPYGKKSPEDIL-RLSIKNTELL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + V+ACNTA T LR T+ +++F+G PAIK A + S + +L+T TL Sbjct: 62 LQHNCKIIVVACNTATTNAITYLRETYTNVSFIGIEPAIKPAVLQSNSKTVGVLATKGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF-IEKEGKR 191 SS + S V+ +A GIKI I+KE EG + + GK Sbjct: 122 ---------------------SSSLFHSTVKNHAEGIKI----IEKEGEGLVPLIESGKA 156 Query: 192 T--------------------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 T D +VL CTHYP ++ V ++L P V+ +D+ +++AR+ + Sbjct: 157 TSVEAKDLLKTFLEPMLEQNIDYLVLGCTHYPYLIPVLKELLPAHVNIIDSGEAVARQTK 216 Query: 232 CLLPRIN-THQTRVFDDHALFLSGKPDIAMRRLMQG 266 +L R N ++ V H + + I +R ++G Sbjct: 217 AILERENLLNRGNVASSHKFYTNADVSI-LRSFLKG 251 >gi|327481904|gb|AEA85214.1| glutamate racemase [Pseudomonas stutzeri DSM 4166] Length = 264 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 5/211 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+++R +P +Y+AD PYG +++R + + +++ Sbjct: 10 VFDSGVGGLSVLREIRRRLPHESLLYLADSAHVPYGEKSPEYIRERCRIIAAFFVEQGAK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA ELR +P + +G PA+K AAA T+SG++ +L+T TL+ Sbjct: 70 AL-VLACNTATAAGVTELRELYPDLPIIGMEPAVKPAAAATRSGVVGVLATTGTLKSARF 128 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + + L R+E + + +EG + D ++L Sbjct: 129 AALLDRFAGDVRVITQPCPGLVERIEAG----DLASANTRAMLEGWVGPLLAQGCDTLIL 184 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 CTHYP I + QL P V +D ++AR Sbjct: 185 GCTHYPFIRPLLAQLLPGDVRLIDTGAAVAR 215 >gi|240950246|ref|ZP_04754526.1| glutamate racemase [Actinobacillus minor NM305] gi|240295247|gb|EER46046.1| glutamate racemase [Actinobacillus minor NM305] Length = 253 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 6/251 (2%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL + ++R ++P H++Y D+ FPY + AL +R + + I +K L V+ Sbjct: 1 MGGLTIYDEVRKVLPNAHYLYCFDNAFFPYSEKSEQALIERAVKIVQKIAEKQPLDLVVV 60 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 ACNTA T++ LR F +G VPAIK AAA +++ I +L+T T++R Y +LIH Sbjct: 61 ACNTASTVVLPALRERF-DFPIVGTVPAIKPAAAISKTKTIGLLATVGTIKRPYVLDLIH 119 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 Y C + + + + E + +K+ +E D ++L CTH+ Sbjct: 120 RYAKDCQVEKIGNTQIVELAETKLLTGSVDLFSLKECVEPWL---NHPTLDTVILGCTHF 176 Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262 PL+ +QL P ++D+ ++IA+R + LL + H ++ F + + R Sbjct: 177 PLLKEELKQLLPQVTYFVDSGEAIAKRVQSLLLENHHHSQEKERENTAFCTELTENFKNR 236 Query: 263 --LMQGFGLKS 271 +M G KS Sbjct: 237 EVMMHKLGFKS 247 >gi|167467898|ref|ZP_02332602.1| glutamate racemase [Yersinia pestis FV-1] Length = 198 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 1/164 (0%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + + + + Sbjct: 27 TALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQR 86 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+ Sbjct: 87 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 145 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +YT +LI + + C I L+ S L E G + + +KK Sbjct: 146 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKK 189 >gi|319957379|ref|YP_004168642.1| glutamate racemase [Nitratifractor salsuginis DSM 16511] gi|319419783|gb|ADV46893.1| glutamate racemase [Nitratifractor salsuginis DSM 16511] Length = 278 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/232 (30%), Positives = 109/232 (46%), Gaps = 12/232 (5%) Query: 11 KLQNS------ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 K+QN I IFDSG+GGL VL+ + +P +Y+AD PYG ++ Sbjct: 4 KIQNPKSKIVRIGIFDSGLGGLTVLRPIMQALPGAEILYLADTAHAPYGEKSREEIRSYS 63 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + + + ++ V+ACNTA + LR FP + +G P IK A ++S + Sbjct: 64 LGIAEYFIREHDVDALVVACNTATSAAIATLRERFPDLPIVGTEPGIKPAVRASRSAKVG 123 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIEG 182 IL+TPATL L ++ + L L R+E +++ E ++ +EG Sbjct: 124 ILATPATLAGEKYQALAERLCTEHEVQLFEQACPGLVERIERG----EVESPECRRMLEG 179 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D IVL CTHYPL R++ PV ++ ++IARR LL Sbjct: 180 WLAPMREAGVDTIVLGCTHYPLAASAIREVMGTPVTLIETGEAIARRLLSLL 231 >gi|264677499|ref|YP_003277405.1| glutamate racemase [Comamonas testosteroni CNB-2] gi|262208011|gb|ACY32109.1| glutamate racemase [Comamonas testosteroni CNB-2] Length = 298 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 118/236 (50%), Gaps = 13/236 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA-LKKRLMFLFSDIL 72 + I IFDSG+GGL VLQ +R +P F+Y+AD PYG+ A +++R + + +L Sbjct: 6 SPIGIFDSGVGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAIAKYLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++ + VIACNTA + LR P + +G PAIK A+ +Q+ + +++T T+ Sbjct: 66 EQHDIKILVIACNTATAAAVELLRERLPQLPVIGVEPAIKPASFSSQTHHVGVMATRGTI 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182 + L+ + + HL + LA +E+ + + ED EI G Sbjct: 126 SSQRVARLVSEHGQRAEFHLQACDGLARAIEQ-STEQALPEDASATEIRALCAKYTSALG 184 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 F K G+ D +VL CTHY + R L + LD +AR+ R +L + N Sbjct: 185 SFGLKTGQ-MDTLVLGCTHYVFVKDDLRALLGPDIQLLDTGAPVARQTRRMLEQRN 239 >gi|323703720|ref|ZP_08115360.1| glutamate racemase [Desulfotomaculum nigrificans DSM 574] gi|323531308|gb|EGB21207.1| glutamate racemase [Desulfotomaculum nigrificans DSM 574] Length = 268 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 126/242 (52%), Gaps = 9/242 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +++R L+P IY AD PYG+ + +++R + + +L + Sbjct: 7 IGIFDSGVGGLSVAREIRRLLPMEDIIYYADSAFCPYGDKDPEVIRRREIAIVDFLLSQG 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA + D+LR FP + +G PA+K A A T++G I IL+T T+ Sbjct: 67 AKMI-VVACNTASSTGLDDLRKMFP-VPIVGMEPAVKPAVAATRNGKIGILATSVTIAGE 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 ++LI + ++ L RVE ++ + E +K + G ++ D I Sbjct: 125 RLASLIKRFAEHVNVITQPCPGLVERVEHG----QLDDPETEKILAGFLKPILEQQADTI 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDDHALFLS 253 VL CTHYP + + ++ + +D +++A++ +L N H+ RV + F S Sbjct: 181 VLGCTHYPFLTPLIEKIVGPNIAIIDTGEAVAKQVSRVLNEHNLAVHEPRVGQEK-FFTS 239 Query: 254 GK 255 G Sbjct: 240 GN 241 >gi|89901373|ref|YP_523844.1| glutamate racemase [Rhodoferax ferrireducens T118] gi|89346110|gb|ABD70313.1| glutamate racemase [Rhodoferax ferrireducens T118] Length = 271 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 1/230 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSGIGGL +L+ +R +P F+Y+AD PYG ++ + R + + +L Sbjct: 9 KRPIGVFDSGIGGLSILKALRAELPREDFVYMADSGHAPYGERDEAHVIARSSAITTHLL 68 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +Y V+ACNTA LR P + +G PA+K A A +++ I +++T +TL Sbjct: 69 AQYDIQALVVACNTATAAAISTLRQAHPLLPIIGLEPALKPALALSKTRRIGVMATRSTL 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 L+ S Q LA +E I G F EG+ Sbjct: 129 GSAKFGTLVASLAGQAEFMCQPCDGLADAIERQDTTKTIALCAYYTGAIGRFGINEGE-I 187 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTHYP RQL V +D +++AR+ R LLP ++ T Sbjct: 188 DTLVLGCTHYPFASDTLRQLLGSSVQLIDTGEAVARQTRRLLPSPSSADT 237 >gi|221068298|ref|ZP_03544403.1| glutamate racemase [Comamonas testosteroni KF-1] gi|220713321|gb|EED68689.1| glutamate racemase [Comamonas testosteroni KF-1] Length = 298 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 71/232 (30%), Positives = 116/232 (50%), Gaps = 13/232 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA-LKKRLMFLFSDIL 72 + I IFDSG+GGL VLQ +R +P F+Y+AD PYG+ A +++R + + +L Sbjct: 6 SPIGIFDSGVGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAIAQYLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA + +R P + +G PAIK A+ +Q+ + +++T T+ Sbjct: 66 QQHDIKILVIACNTATAAAVELMRERMPQLPVIGVEPAIKPASFSSQTHHVGVMATRGTV 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182 + L+ + + HL + LA +E+ + + ED EI G Sbjct: 126 SSQRVARLVAEHGQRAEFHLQACDGLARAIEQ-STEQALPEDASATEIRALCTKYTSALG 184 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 F K G+ D +VL CTHY + R L + +LD +AR+ R +L Sbjct: 185 SFGHKTGQ-MDTLVLGCTHYVFVKDDLRALLGPDIQFLDTGAPVARQTRRML 235 >gi|146283506|ref|YP_001173659.1| glutamate racemase [Pseudomonas stutzeri A1501] gi|167017320|sp|A4VPB6|MURI_PSEU5 RecName: Full=Glutamate racemase gi|145571711|gb|ABP80817.1| glutamate racemase [Pseudomonas stutzeri A1501] Length = 264 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 5/217 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+++R +P +Y+AD PYG +++R + + ++K Sbjct: 10 VFDSGVGGLSVLREIRQRLPHESLLYLADSAHVPYGEKSPEYIRERCRVIAAFFVEKGAK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA ELR +P + + PA+K AA T+SG++ +L+T TL+ Sbjct: 70 AL-VVACNTATAAGVTELRELYPQLPIIAMEPAVKPAALATRSGVVGVLATTGTLKSAKF 128 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + + + L R+E ++ + + + G + D ++L Sbjct: 129 AALLDRFAADVRVITQPCPGLVERIEAG----DLESADTRAMLMGWVEPMLAQGCDTLIL 184 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 CTHYP I + +QL P + +D ++AR R +L Sbjct: 185 GCTHYPFIRPLLQQLLPNDIRLIDTGAAVARHLREML 221 >gi|332297563|ref|YP_004439485.1| Glutamate racemase [Treponema brennaborense DSM 12168] gi|332180666|gb|AEE16354.1| Glutamate racemase [Treponema brennaborense DSM 12168] Length = 282 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 2/212 (0%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG GGL ++ ++ PE +Y+AD FPYG + + + I+ K+QP Sbjct: 8 LDSGTGGLPYMRYLKQQCPEARCVYLADTFHFPYGEKSVSQIIRYATDVSDLIIRKWQPK 67 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 VIACNT D LR FP F+G VPA+KQAAA T++G+I +L+T T+R YT Sbjct: 68 AVVIACNTMSVTALDSLRKRFPQTPFIGTVPAVKQAAACTRNGIIGLLATTRTVRDPYTD 127 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 LI + C + L +E E + + F + G D ++L Sbjct: 128 ALIRKFAPGCTVVRRGDGALIDFIEHRLVSAPDAERKRAVQPAADFFKSHG--ADTVILG 185 Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 CTH+ I ++ V +D+ + R+A Sbjct: 186 CTHFVHIADDIQEAVGRGVSVIDSRSGVVRQA 217 >gi|226946178|ref|YP_002801251.1| glutamate racemase [Azotobacter vinelandii DJ] gi|226721105|gb|ACO80276.1| glutamate racemase [Azotobacter vinelandii DJ] Length = 263 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 5/222 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + +FDSG+GGL VL ++R +P YVAD PYG +++R + + +L Sbjct: 4 EAPVGVFDSGVGGLSVLSEIRARLPGESLFYVADSGHVPYGEKSSEYIRERCRHIAAFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA ELR +P + +G PA+K AAA T+SG + +L+T TL Sbjct: 64 ERGAKAL-VLACNTATAAAVAELRELYPELPVIGMEPAVKPAAAATRSGRVGVLATSGTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + L R+E + ++ + G + Sbjct: 123 KSARFAALLDRFAGDVRVITQPCPGLVERIEAG----DLDGPATRELLRGFVAPLLAEGC 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYP + + L P + +D ++AR+ LL Sbjct: 179 DTLILGCTHYPFVRPLLGTLVPDSISLIDTGAAVARQLERLL 220 >gi|145636801|ref|ZP_01792467.1| glutamate racemase [Haemophilus influenzae PittHH] gi|145270099|gb|EDK10036.1| glutamate racemase [Haemophilus influenzae PittHH] Length = 257 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 4/218 (1%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GG + ++ + L+P +H++Y D+ GFPY E+ ++ R + I +Y Sbjct: 3 SGVGGFSIYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAACQLINQRYPLDAI 62 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140 VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T T++R Y L Sbjct: 63 VIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATKGTVKRHYIDEL 121 Query: 141 IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 I + C + + + L E+ G + +K E+ + D +VL CT Sbjct: 122 IDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD---LDTLVLGCT 178 Query: 201 HYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 H+PLI + P ++D S +IA+R + LL N Sbjct: 179 HFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 216 >gi|260063790|ref|YP_003196870.1| glutamate racemase [Robiginitalea biformata HTCC2501] gi|88783235|gb|EAR14408.1| glutamate racemase [Robiginitalea biformata HTCC2501] Length = 257 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 122/253 (48%), Gaps = 15/253 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILD 73 +FDSG+GGL + ++ L+P H IY+AD PYG A+ +K +L Sbjct: 3 VFDSGVGGLTIWHELVRLLPAEHTIYLADSANAPYGGQSPGAILELARKNTRWLLERGCK 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 L V+ACNTA T D LR+ FP + F+G PAIK AA ++SG I +L+T TL Sbjct: 63 -----LIVVACNTATTNAIDRLRAEFP-VPFIGIEPAIKPAALNSRSGKIGVLATRGTLS 116 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + ++ ++ S I + L R+E D +++ ++ ++ D Sbjct: 117 SSLFASTSRNFGSGIEIVEQEGVDLVERIESAGPDDPELRDILERLLKPMLLQG----ID 172 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFL 252 +VL CTHYPL+ L P V LD +AR++R +L R + H L Sbjct: 173 YLVLGCTHYPLLKPTLEHLLPEGVRILDCGLPVARQSRAILEREGLLRDAGGPVRHELLT 232 Query: 253 SGKPDIAMRRLMQ 265 +G P + + L+Q Sbjct: 233 NGDPGVMRQVLLQ 245 >gi|94676801|ref|YP_588621.1| glutamate racemase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219951|gb|ABF14110.1| glutamate racemase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 274 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 122/232 (52%), Gaps = 2/232 (0%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +ILI DSG+GGL + +++ ++P +++YV D+ FPYG + RL+ + + + Sbjct: 10 TILIVDSGVGGLSIFYQIKKIIPNANYLYVFDNEAFPYGEKTKRFIINRLIIIINAVRKL 69 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + L +IACNTA L LR F +G +PAIK A T S +I +L+T AT+ Sbjct: 70 HYVDLIIIACNTASILALKALRQYF-FYPIIGVLPAIKLATTITNSKVIGLLATTATINS 128 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y +N I++Y I + + L + VE G KI +++ + + + D Sbjct: 129 KYITNSINNYKKSYKIISLKAPELVNLVEAKLHGEKISLLSLREILFPWLKTSQTYKLDT 188 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-INTHQTRVF 245 I+L CTH+PLI + + P + +D ++A R L + IN++Q+ +F Sbjct: 189 IILGCTHFPLIYEELKLILPTSIKIIDAHQTVANRVFLLSKKFINSNQSSIF 240 >gi|330951099|gb|EGH51359.1| glutamate racemase [Pseudomonas syringae Cit 7] Length = 271 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 5/240 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 16 IFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 76 AL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + + + L +E + +I++ ++ R D I+L Sbjct: 135 AALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARCDTIIL 190 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTHYP + + RQ+ P V +D ++AR+ + LL R + + V D + S PD Sbjct: 191 GCTHYPFLKPLLRQMLPESVTLIDTGAAVARQLQRLLARSDLLASGVARDTVYWSSDIPD 250 >gi|121610154|ref|YP_997961.1| glutamate racemase [Verminephrobacter eiseniae EF01-2] gi|121554794|gb|ABM58943.1| glutamate racemase [Verminephrobacter eiseniae EF01-2] Length = 301 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 9/230 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL +R +P F+Y+AD PYG + R + + + Sbjct: 19 QQPIGVFDSGVGGLSVLHALRAALPRERFVYLADSANAPYGERAAAQVSARTLAITGYLR 78 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++ V+ACNTA DELR P + +G PA+K A A TQ+G + ++ T TL Sbjct: 79 AQHRIKALVVACNTATAAAIDELRQRHPGLPLVGLEPALKPALALTQTGHVGVIGTRGTL 138 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK--------EIEGCF 184 L+ S + H L LA +E + G F Sbjct: 139 GSAKFGKLLASLADRAHFVLQPCDGLAHAIERSVLSTAPVSGSTETGALCQRYLHAMGTF 198 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + G+ D +VL CTHY + R L V +++ +AR+ R LL Sbjct: 199 GKAPGQ-IDTLVLGCTHYLFVTDELRALLGPGVQFVETGAPVARQTRRLL 247 >gi|171059222|ref|YP_001791571.1| glutamate racemase [Leptothrix cholodnii SP-6] gi|170776667|gb|ACB34806.1| glutamate racemase [Leptothrix cholodnii SP-6] Length = 272 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + L+P +YVAD PYG +++R + + + + D+ Sbjct: 12 IGVFDSGLGGLSVLRAIHELLPSATLMYVADSGHAPYGERSVAYVEERSLRIAAFLRDQG 71 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VL V+ACNTA LR A +G P IK AAA T++G I +L+T TLR Sbjct: 72 AQVL-VVACNTATAAAVQALRMHHRDWAIVGVEPGIKPAAAMTRNGRIGVLATEGTLRSD 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L ++ + + L + LA+ +E A + + + ++ C + D + Sbjct: 131 RFKLLAQAHAAHVELFLQACPGLAAAIESGA----LTSPAVTERVQTCCAPLREHQVDTV 186 Query: 196 VLACTHYPLIVH-VFRQLSPWPVDWLDNSDSIARRARCL 233 VL CTHYP + + + L P V +D +D++ARR L Sbjct: 187 VLGCTHYPFVANQIAAALGP-DVVLIDTADAVARRTLAL 224 >gi|302186441|ref|ZP_07263114.1| glutamate racemase [Pseudomonas syringae pv. syringae 642] Length = 271 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 5/240 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 16 IFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 76 AL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + S + L +E + +I++ ++ R D I+L Sbjct: 135 AALLDRFASDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARCDTIIL 190 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTHYP + + R++ P V +D ++AR+ + LL R + V D + S PD Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGVLASGVARDTLYWSSDIPD 250 >gi|145629155|ref|ZP_01784954.1| glutamate racemase [Haemophilus influenzae 22.1-21] gi|144978658|gb|EDJ88381.1| glutamate racemase [Haemophilus influenzae 22.1-21] Length = 217 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 105/197 (53%), Gaps = 4/197 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AD 178 Query: 189 GKRTDVIVLACTHYPLI 205 D +VL CTH+PLI Sbjct: 179 MADLDTLVLGCTHFPLI 195 >gi|315635708|ref|ZP_07890971.1| glutamate racemase [Arcobacter butzleri JV22] gi|315480005|gb|EFU70675.1| glutamate racemase [Arcobacter butzleri JV22] Length = 261 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 18/220 (8%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+ + ++ Y+AD PYG + + KR + + +L +Y+ Sbjct: 5 VFDSGLGGLTVLKSILKVLKNAEIFYIADTAYAPYGEKDSALILKRCEDITNYLLKEYKI 64 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 ++ACNTA + LR F S+ +G P IK A T+S I IL+TP+TL+ Sbjct: 65 DALIVACNTATSAAIKHLRENFSSLIVIGTEPGIKPAILNTKSSNIGILATPSTLKSDKY 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYAC---GIKIKEDEIK-----KEIEGCFIEKEG 189 L++ S ++L E AC ++I++ EI K +E I + Sbjct: 125 QLLVNELSSIKKVNLF----------EQACPGLAMQIEKGEINTLTTYKMLEEWLIPMKE 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + D IVL CTHYPLI +++ + + D+IA+R Sbjct: 175 ENVDTIVLGCTHYPLISQTIKKIMGEDITLIQTGDAIAKR 214 >gi|330975580|gb|EGH75646.1| glutamate racemase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 271 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 5/240 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 16 IFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 76 AL-VVACNTATAAGVSHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + + + L +E + +I++ ++ R D I+L Sbjct: 135 AALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLQHYVEPLLAARCDTIIL 190 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTHYP + + R++ P V +D ++AR+ + LL R + V D + S PD Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVSRDTVYWSSDIPD 250 >gi|239815499|ref|YP_002944409.1| glutamate racemase [Variovorax paradoxus S110] gi|239802076|gb|ACS19143.1| glutamate racemase [Variovorax paradoxus S110] Length = 269 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 1/227 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + + +FDSG+GGL VL +R +P F+Y AD PYG D + +R + + Sbjct: 1 MNHPVGVFDSGVGGLSVLAALRAELPHERFVYFADTAFAPYGERGDAYVIERSRKVAEQL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + ++ V+ACNTA T LR+ P++ +G PA+K A A +++G I++++T T Sbjct: 61 MAEHGIKALVVACNTATTAAIHLLRAEHPALPIVGLEPALKPAVATSRTGHIAVMATRGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L + L S+ ++ V L +E + I E + E + + Sbjct: 121 LASAKYAALRDSFAGTANVRAVPCDGLVKAIEGFDTA-AITELCARYMAEAGPLGDGPGQ 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTHYPL+ + ++ +P + ++D +A++AR +L + Sbjct: 180 VDTVVLGCTHYPLVKNELQRHAPPALRFIDTGAPVAQQARRVLASLG 226 >gi|289678403|ref|ZP_06499293.1| glutamate racemase [Pseudomonas syringae pv. syringae FF5] gi|330900878|gb|EGH32297.1| glutamate racemase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 271 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 5/240 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 16 IFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 76 AL-VVACNTATAAGVSHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + + + L +E + +I++ ++ R D I+L Sbjct: 135 AALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLQHYVEPLLAARCDTIIL 190 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTHYP + + R++ P V +D ++AR+ + LL R + V D + S PD Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVSRDTVYWSSDIPD 250 >gi|157736547|ref|YP_001489230.1| glutamate racemase [Arcobacter butzleri RM4018] gi|189082951|sp|A8ERI7|MURI_ARCB4 RecName: Full=Glutamate racemase gi|157698401|gb|ABV66561.1| glutamate racemase [Arcobacter butzleri RM4018] Length = 261 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 18/220 (8%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+ + ++ Y+AD PYG + + KR + + +L +Y+ Sbjct: 5 VFDSGLGGLTVLKSILKVLKNAEIFYIADTAYAPYGEKDSALILKRCEDITNYLLKEYKI 64 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 ++ACNTA + LR F S+ +G P IK A T+S I IL+TP+TL+ Sbjct: 65 DALIVACNTATSAAIKHLRDNFSSLIVIGTEPGIKPAILNTKSSNIGILATPSTLKSDKY 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYAC---GIKIKEDEIK-----KEIEGCFIEKEG 189 L++ S ++L E AC ++I++ EI K +E I + Sbjct: 125 QLLVNELSSIKKVNLF----------EQACPGLAMQIEKGEINTLTTYKMLEEWLIPMKE 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D IVL CTHYPLI +++ + + D+IA+R Sbjct: 175 ANVDTIVLGCTHYPLISQTIKKIMGEDITLIQTGDAIAKR 214 >gi|66044205|ref|YP_234046.1| glutamate racemase [Pseudomonas syringae pv. syringae B728a] gi|63254912|gb|AAY36008.1| Glutamate racemase [Pseudomonas syringae pv. syringae B728a] gi|330972817|gb|EGH72883.1| glutamate racemase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 271 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 5/240 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 16 IFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 76 AL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + + + L +E + +I++ ++ R D I+L Sbjct: 135 AALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARCDTIIL 190 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTHYP + + R++ P V +D ++AR+ + LL R + V D + S PD Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLTRSGLLASGVARDTVYWSSDIPD 250 >gi|152988174|ref|YP_001350643.1| glutamate racemase [Pseudomonas aeruginosa PA7] gi|166231048|sp|A6VC58|MURI_PSEA7 RecName: Full=Glutamate racemase gi|150963332|gb|ABR85357.1| glutamate racemase [Pseudomonas aeruginosa PA7] Length = 265 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 18/239 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++ Sbjct: 10 VFDSGVGGLSVLREIRARLPAESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLERGAK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+ Sbjct: 70 AL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTLKSARF 128 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 + L+ + S + L R+E G + + + + + G +E+ D ++ Sbjct: 129 AALLDRFASDVQVFTQPCPGLVERIEAGDLHGARTR--ALLERLLGPILEQG---CDTLI 183 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 L CTHYP + + +L P + +D ++AR RV AL SG+ Sbjct: 184 LGCTHYPFVKPLLAELIPADIAVIDTGAAVAR-----------QLERVLSTRALLASGQ 231 >gi|254238598|ref|ZP_04931921.1| glutamate racemase [Pseudomonas aeruginosa C3719] gi|126170529|gb|EAZ56040.1| glutamate racemase [Pseudomonas aeruginosa C3719] Length = 265 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++ Sbjct: 7 AVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+ Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTLKS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189 + L+ + S + L R+E Y + + + I +GC Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTHYP + + +L P + +D ++AR RV A Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225 Query: 250 LFLSGK 255 L SG+ Sbjct: 226 LLASGQ 231 >gi|15599857|ref|NP_253351.1| glutamate racemase [Pseudomonas aeruginosa PAO1] gi|107099671|ref|ZP_01363589.1| hypothetical protein PaerPA_01000689 [Pseudomonas aeruginosa PACS2] gi|218893759|ref|YP_002442628.1| glutamate racemase [Pseudomonas aeruginosa LESB58] gi|296391483|ref|ZP_06880958.1| glutamate racemase [Pseudomonas aeruginosa PAb1] gi|20177990|sp|Q9HVD0|MURI_PSEAE RecName: Full=Glutamate racemase gi|226722988|sp|B7V0K8|MURI_PSEA8 RecName: Full=Glutamate racemase gi|9950917|gb|AAG08049.1|AE004880_5 glutamate racemase [Pseudomonas aeruginosa PAO1] gi|218773987|emb|CAW29802.1| glutamate racemase [Pseudomonas aeruginosa LESB58] Length = 265 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++ Sbjct: 7 AVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+ Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTLKS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189 + L+ + S + L R+E Y + + + I +GC Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTHYP + + +L P + +D ++AR RV A Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225 Query: 250 LFLSGK 255 L SG+ Sbjct: 226 LLASGQ 231 >gi|116052807|ref|YP_793124.1| glutamate racemase [Pseudomonas aeruginosa UCBPP-PA14] gi|122257182|sp|Q02G12|MURI_PSEAB RecName: Full=Glutamate racemase gi|115588028|gb|ABJ14043.1| glutamate racemase [Pseudomonas aeruginosa UCBPP-PA14] Length = 265 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++ Sbjct: 7 AVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+ Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVQLVAMEPAVKPAAAATRNGRVGVLATTGTLKS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189 + L+ + S + L R+E Y + + + I +GC Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTHYP + + +L P + +D ++AR RV A Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225 Query: 250 LFLSGK 255 L SG+ Sbjct: 226 LLASGQ 231 >gi|49082808|gb|AAT50804.1| PA4662 [synthetic construct] Length = 266 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++ Sbjct: 7 AVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+ Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTLKS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189 + L+ + S + L R+E Y + + + I +GC Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTHYP + + +L P + +D ++AR RV A Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225 Query: 250 LFLSGK 255 L SG+ Sbjct: 226 LLASGQ 231 >gi|298243458|ref|ZP_06967265.1| glutamate racemase [Ktedonobacter racemifer DSM 44963] gi|297556512|gb|EFH90376.1| glutamate racemase [Ktedonobacter racemifer DSM 44963] Length = 308 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 13/223 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I ++DSG GGL +L ++R ++P F+Y D PYG + + K+ FL Sbjct: 44 IGVYDSGAGGLTILTELRKILPHEDFLYYGDTRHCPYGVRSEQEIIELAKQASCFLLERG 103 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + L V+ACNTA + LR +FP + F+G VPA+K AA+ T+ G I + +T Sbjct: 104 VK-----LIVVACNTASQAALEALRLSFPDVPFVGVVPAVKPAASLTRKGRIGVAATNQA 158 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Y LI + + ++ L + VE+ +++ E++ + Sbjct: 159 AKSAYLQQLIEDFATGVEVYAQGCSELVTLVEKG----QLQGPEVEATLRQSLHPLLQHD 214 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV+VL CTH+P + R + V +D+ +IARR R LL Sbjct: 215 IDVLVLGCTHFPALREAIRHIVGPGVQVIDSGAAIARRTRFLL 257 >gi|163803387|ref|ZP_02197262.1| glutamate racemase [Vibrio sp. AND4] gi|159172791|gb|EDP57636.1| glutamate racemase [Vibrio sp. AND4] Length = 237 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 7/216 (3%) Query: 41 FIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP 100 ++Y+ D+ +PYG E L R+ L + +++++Q + VIACNTA T++ LR+ Sbjct: 3 YLYLFDNEAYPYGELEHDVLINRVNTLVAALVEEHQADIVVIACNTASTIVLPSLRANL- 61 Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160 ++ +G VPAIK A+ G + +++TPAT+ R YT LI + + L+ S L Sbjct: 62 AIPVVGVVPAIKPASLLASQG-VGLIATPATVTRQYTRELIRDFAQGKPVELLGSTRLVD 120 Query: 161 RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWL 220 EE G I E+E + K DV VL CTH+PLI Q V + Sbjct: 121 MAEEKLRGQIIH----IPELESILLPLRHK-VDVAVLGCTHFPLIKDEIHQALGGDVMLI 175 Query: 221 DNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 D+ +IARR R LL +T ++ S P Sbjct: 176 DSGKAIARRVRALLASDKEQETAEEGSKKIYASASP 211 >gi|330502036|ref|YP_004378905.1| glutamate racemase [Pseudomonas mendocina NK-01] gi|328916322|gb|AEB57153.1| glutamate racemase [Pseudomonas mendocina NK-01] Length = 271 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 5/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++R L+P +YVAD PYG +++R + + + + Sbjct: 16 IGVFDSGVGGLSVLREIRQLLPNETLLYVADSGHVPYGEKSPEYIRERCVVITEHLRAQG 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA ELR + + +G PA+K AAA T+SG++ +L+T TL+ Sbjct: 76 AKAL-VLACNTATAAAAGELRERYADLPIVGMEPAVKPAAAATRSGVVGVLATTGTLKSA 134 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + + + L +E +++ ++ ++G + D + Sbjct: 135 RFAALLDRFANDVRVITQPCPGLVECIEAG----ELQAPATRELLQGYVAPLLAEGCDTL 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +L CTHYP + + +L P V +D ++AR+ + LL Sbjct: 191 ILGCTHYPFLRPLLGELVPPSVTLIDTGAAVARQLQRLL 229 >gi|237799730|ref|ZP_04588191.1| glutamate racemase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022585|gb|EGI02642.1| glutamate racemase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 271 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 5/240 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL ++R +P +YVAD PYG + +R + + ++ Sbjct: 16 IFDSGVGGLSVLNEIRQSLPNESLLYVADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 76 AL-VVACNTATAAGVAHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + S + L +E + +I++ ++ + D I+L Sbjct: 135 AALLDRFASDVRVVTQPCPGLVELIETG----DLISPQIRQLLQHYVKPLLAAQCDTIIL 190 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTHYP + + R++ P V +D ++AR+ + LL R + D + SG PD Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPARDTLYWSSGIPD 250 >gi|313107324|ref|ZP_07793519.1| glutamate racemase [Pseudomonas aeruginosa 39016] gi|310880021|gb|EFQ38615.1| glutamate racemase [Pseudomonas aeruginosa 39016] Length = 265 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++ Sbjct: 7 AVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+ Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGGVGVLATTGTLKS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189 + L+ + S + L R+E Y + + + I +GC Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTHYP + + +L P + +D ++AR RV A Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225 Query: 250 LFLSGK 255 L SG+ Sbjct: 226 LLASGQ 231 >gi|313201826|ref|YP_004040484.1| glutamate racemase [Methylovorus sp. MP688] gi|312441142|gb|ADQ85248.1| glutamate racemase [Methylovorus sp. MP688] Length = 297 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 110/212 (51%), Gaps = 6/212 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL +R +P+ IY AD + PYG+ + R + L SD L Sbjct: 40 VFDSGVGGLSVLAHIRQALPQESLIYAADSMHAPYGSKSQAFIIDRAIQL-SDFLISRGA 98 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ACNTA ELRS + ++ +G PA+K AAA T+SG+I +L+T TL+ Sbjct: 99 KALVVACNTATAAAISELRSRY-AIPIIGMEPAVKPAAAATRSGVIGVLATSGTLQSAQF 157 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ SY Q + + + L +E +++ + ++ +E D +VL Sbjct: 158 AALLESYGRQVRVETQACVGLVECIERG----ELQTADTRQLLEKYIQPLLEAGADTLVL 213 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 CTHYP + + +L+ V +D ++AR+ Sbjct: 214 GCTHYPFVRPLIEELAGPEVAIIDTGAAVARQ 245 >gi|88799058|ref|ZP_01114639.1| glutamate racemase [Reinekea sp. MED297] gi|88778285|gb|EAR09479.1| glutamate racemase [Reinekea sp. MED297] Length = 257 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 111/220 (50%), Gaps = 9/220 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL +R L+P+ IYVAD PYG+ + + +R + S L + Sbjct: 2 IGVFDSGLGGLTVLNSIRSLLPDQALIYVADQAYTPYGDQSEATVTQRSREI-SQWLIEQ 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA + D+LR F S+ +G P +K AA +++ I IL+T T+ Sbjct: 61 GCQLIVIACNTATAIAIDQLRREF-SVPIVGVEPGVKPAALLSRTRKIGILATENTVASQ 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI +++ + LA +E I ++K + C + EG D + Sbjct: 120 RYQRLIQAFLPNVQVISQGCSGLADAIESDPEAIPAL---LQKYL--CPLLDEG--VDQV 172 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 VL CTHYPLI QL+ +D SD+IA R LP Sbjct: 173 VLGCTHYPLIRSQIEQLAGARARVIDTSDAIAMEVRRRLP 212 >gi|295093321|emb|CBK82412.1| glutamate racemase [Coprococcus sp. ART55/1] Length = 255 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 75/231 (32%), Positives = 115/231 (49%), Gaps = 12/231 (5%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GG+ VL+ + LMP ++IY D PYG A+ +R + +L K Sbjct: 5 SIGVFDSGLGGISVLRDIVELMPCENYIYFGDSAHAPYGTKTREAILERSEQCTNFLLAK 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA ++ LR +PS+ +G PA+K A + + +++++TPATL Sbjct: 65 DVKAI-VIACNTATSVAASTLRQQYPSIPIIGIEPALKPAVLWKEHDKVAVMATPATLAL 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ Y + I+ V LA VE+ GI +EI + ++G K D Sbjct: 124 PKFHELMKHYSKESDIYPVPCPGLADYVEK---GI-FDGEEITEFLKGLLAPSLEKHVDA 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA-------RRARCLLPRIN 238 IVL CTHYP + V ++++ V + + A R A L P I Sbjct: 180 IVLGCTHYPFVEKVIQRIAGPDVKIFNGAHGTALELQRRLRIAELLTPSIE 230 >gi|253999852|ref|YP_003051915.1| glutamate racemase [Methylovorus sp. SIP3-4] gi|253986531|gb|ACT51388.1| glutamate racemase [Methylovorus sp. SIP3-4] Length = 273 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 108/212 (50%), Gaps = 6/212 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL +R +P+ IY AD + PYG+ + R + L SD L Sbjct: 16 VFDSGVGGLSVLAHIRQALPQELLIYAADSMHAPYGSKSQAFIIDRAIQL-SDFLISRGA 74 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ACNTA ELRS + + +G PA+K AAA T+SG+I +L+T TL+ Sbjct: 75 KALVVACNTATAAAISELRSRY-VIPIIGMEPAVKPAAAATRSGVIGVLATSGTLQSAQF 133 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ SY Q + + + L +E ++K I+ + G D +VL Sbjct: 134 AALLESYGRQVRVETQACVGLVECIERGELQTAATRQLLEKYIQPLL--EAG--ADTLVL 189 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 CTHYP + + +L+ V +D ++AR+ Sbjct: 190 GCTHYPFVRPLIEELAGPEVAIIDTGAAVARQ 221 >gi|189350987|ref|YP_001946615.1| glutamate racemase [Burkholderia multivorans ATCC 17616] gi|189335009|dbj|BAG44079.1| glutamate racemase [Burkholderia multivorans ATCC 17616] Length = 290 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 115/254 (45%), Gaps = 18/254 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++ Sbjct: 21 IGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQR 80 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR Sbjct: 81 AKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRSA 138 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ + + C L VE G ++ ++G D I Sbjct: 139 RFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADTI 194 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SG 254 VL CTHYP + R L + +D SD+IAR RV + H L +G Sbjct: 195 VLGCTHYPFLTPAIRSLIGERMTIVDTSDAIAR-----------QLARVLEQHGLRTPAG 243 Query: 255 KPDIAMRRLMQGFG 268 P A R G G Sbjct: 244 VPAAAPRFCSTGDG 257 >gi|221198503|ref|ZP_03571549.1| glutamate racemase [Burkholderia multivorans CGD2M] gi|221208547|ref|ZP_03581548.1| glutamate racemase [Burkholderia multivorans CGD2] gi|221171538|gb|EEE03984.1| glutamate racemase [Burkholderia multivorans CGD2] gi|221182435|gb|EEE14836.1| glutamate racemase [Burkholderia multivorans CGD2M] Length = 292 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 115/254 (45%), Gaps = 18/254 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++ Sbjct: 23 IGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQR 82 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR Sbjct: 83 AKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRSA 140 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ + + C L VE G ++ ++G D I Sbjct: 141 RFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRALLDGYLKPMLDAGADTI 196 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SG 254 VL CTHYP + R L + +D SD+IAR RV + H L +G Sbjct: 197 VLGCTHYPFLTTAIRGLIGERMTIVDTSDAIAR-----------QLARVLEQHGLRTPAG 245 Query: 255 KPDIAMRRLMQGFG 268 P A R G G Sbjct: 246 MPAAAPRFCSTGDG 259 >gi|145589323|ref|YP_001155920.1| glutamate racemase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047729|gb|ABP34356.1| glutamate racemase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 268 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 6/240 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL +L + +PE ++Y+AD PYG + +R + L + ++ Sbjct: 4 IGVFDSGVGGLSILDEALRQLPENDYLYLADSANAPYGERSSDWIAQRSLALCRYLANEG 63 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA E+R+ S+ +G P IK AA +TQ+G++ +L+T ATL+ Sbjct: 64 CDAI-VVACNTATAQAIQEIRAQL-SIPVIGVEPGIKPAAMHTQNGIVGVLATEATLKSD 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + S C + L +E + + + K +E I+ G +D I Sbjct: 122 KFNALLATLPSNCRFIKQAGEGLVPLIESGNANSEETLELLAKHLEP--IQDAG--SDTI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYP + R+L + +D SD++ R+ + L + T+ F+S K Sbjct: 178 VLGCTHYPFLRKSIRKLLGDSITLIDTSDAVVRQLKRQLELLQNLSTKKDVGSVTFISSK 237 >gi|221214852|ref|ZP_03587821.1| glutamate racemase [Burkholderia multivorans CGD1] gi|221165391|gb|EED97868.1| glutamate racemase [Burkholderia multivorans CGD1] Length = 292 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 115/254 (45%), Gaps = 18/254 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++ Sbjct: 23 IGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQR 82 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR Sbjct: 83 AKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRSA 140 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ + + C L VE G ++ ++G D I Sbjct: 141 RFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADTI 196 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SG 254 VL CTHYP + R L + +D SD+IAR RV + H L +G Sbjct: 197 VLGCTHYPFLTPAIRSLIGERMTIVDTSDAIAR-----------QLARVLEQHGLRTPAG 245 Query: 255 KPDIAMRRLMQGFG 268 P A R G G Sbjct: 246 VPAAAPRFCSTGDG 259 >gi|161524256|ref|YP_001579268.1| glutamate racemase [Burkholderia multivorans ATCC 17616] gi|160341685|gb|ABX14771.1| glutamate racemase [Burkholderia multivorans ATCC 17616] Length = 292 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 115/254 (45%), Gaps = 18/254 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++ Sbjct: 23 IGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQR 82 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR Sbjct: 83 AKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRSA 140 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ + + C L VE G ++ ++G D I Sbjct: 141 RFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADTI 196 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SG 254 VL CTHYP + R L + +D SD+IAR RV + H L +G Sbjct: 197 VLGCTHYPFLTPAIRSLIGERMTIVDTSDAIAR-----------QLARVLEQHGLRTPAG 245 Query: 255 KPDIAMRRLMQGFG 268 P A R G G Sbjct: 246 VPAAAPRFCSTGDG 259 >gi|330873304|gb|EGH07453.1| glutamate racemase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 275 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 5/251 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + +FDSG+GGL VL ++R +P+ +Y+AD PYG + +R + Sbjct: 9 PVLQNCDAPVGVFDSGVGGLSVLNEIRQTLPKESLLYLADCGHIPYGEKTPEFIIERCLI 68 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + +D + V+ACNTA +R +P +G PA+K AA T+SG++ +L Sbjct: 69 I-ADFFHEQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T TL+ + L+ + S + L +E + +I++ ++ Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243 Query: 247 DHALFLSGKPD 257 D + S PD Sbjct: 244 DTVYWSSDIPD 254 >gi|21672799|ref|NP_660866.1| glutamate racemase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008820|sp|Q8K924|MURI_BUCAP RecName: Full=Glutamate racemase gi|21623448|gb|AAM68077.1| glutamate racemase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 256 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 115/214 (53%), Gaps = 3/214 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LI DSGIGGL +L ++ P ++IY+ D+ FPYG ++ L +R + + + I Y Sbjct: 1 MLIIDSGIGGLSILDNIKKKFPHINYIYMLDNEAFPYGKKKEKFLIERSIKIINAIKKIY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + +IACNTA T+ L+ TF S+ +G +P K A T++ +I +++T +T+ Sbjct: 61 PIKMVIIACNTASTISLPTLKKTF-SIPIIGVLPVFKPAIKITKNKIIGLIATRSTINSL 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y I+ Y + I ++++ LA E+ + I ++KK + I + D I Sbjct: 120 YIKKTIYKYSLENTIKIIATNELAVIAEKKVRKLSISNIKLKKIFQSWII--LSIKPDTI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +L CTH+ + +Q+ P++++D D+I + Sbjct: 178 ILGCTHFSFLKKEIQQIFHKPINFIDPGDTIVNK 211 >gi|254244446|ref|ZP_04937768.1| glutamate racemase [Pseudomonas aeruginosa 2192] gi|126197824|gb|EAZ61887.1| glutamate racemase [Pseudomonas aeruginosa 2192] Length = 265 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 26/246 (10%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GG VL+++R +P +YVAD+ PYG +++R + +L++ Sbjct: 7 AVGVFDSGVGGFSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+ Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTLKS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189 + L+ + S + L R+E Y + + + I +GC Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTHYP + + +L P + +D ++AR RV A Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225 Query: 250 LFLSGK 255 L SG+ Sbjct: 226 LLASGQ 231 >gi|309791176|ref|ZP_07685708.1| glutamate racemase [Oscillochloris trichoides DG6] gi|308226738|gb|EFO80434.1| glutamate racemase [Oscillochloris trichoides DG6] Length = 256 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 6/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P++ +Y+AD PYG ++ R + +L + Sbjct: 2 IGVFDSGLGGLSVLRAIRERLPDHDLLYLADSAYCPYGPRPAAEVRVRAQVCANWLLQQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ VIACNTA + D+LR+ P + +G P +K A A +++G + +L+T TLR Sbjct: 62 ADLI-VIACNTATSAAADQLRAELP-VPVIGLEPGLKPAIAASRNGRVGVLATSGTLRGE 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NL+ + S+ I + S L VE + E++ + G + D + Sbjct: 120 RFMNLVRRFASRAQIFTMPSPDLVGYVEAG----DLNGPEVRAALTGYLEPLRSQGVDAV 175 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VL CTH+P + + +L+ ++ +D ++A + Sbjct: 176 VLGCTHFPFLRPLIAELAGPEIEIIDTGPAVAEQ 209 >gi|163749944|ref|ZP_02157189.1| glutamate racemase [Shewanella benthica KT99] gi|161330458|gb|EDQ01437.1| glutamate racemase [Shewanella benthica KT99] Length = 254 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 7/200 (3%) Query: 46 DDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL 105 D+ PYG + L + L +D + K + VIACNTA TLI LR+ ++ + Sbjct: 3 DNARLPYGELAEQELISGCVALITDFVQKQSVSMVVIACNTASTLILPSLRAVL-NIPVV 61 Query: 106 GAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY 165 G VPAIK AA +++ I +L+TP T++R YT LI + S C + L ++ L E+ Sbjct: 62 GVVPAIKPAALLSRNKHIGLLATPGTIKRAYTHELIAQFASGCSVELYATSELVMLAEQK 121 Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 A G + + E+ +I +E E D +VL CTH+P++ ++ V LD+ + Sbjct: 122 AAGDPVTQQEL-AQILSPILESE---LDTLVLGCTHFPILKQEMQEYLGDRVSLLDSGKA 177 Query: 226 IARRARCLLPRINTHQTRVF 245 +A AR L ++ T Q V Sbjct: 178 VA--ARVLTLKLQTQQEWVL 195 >gi|152993509|ref|YP_001359230.1| glutamate racemase [Sulfurovum sp. NBC37-1] gi|189030376|sp|A6QBL4|MURI_SULNB RecName: Full=Glutamate racemase gi|151425370|dbj|BAF72873.1| glutamate racemase [Sulfurovum sp. NBC37-1] Length = 265 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 2/216 (0%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V+Q + ++ YVAD PYG + + + + + LD++Q Sbjct: 5 VFDSGLGGLTVVQALSRVIKGADIFYVADTKHAPYGEKTPEQILQYSLNITAYFLDEHQI 64 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 + +IACNTA + LR +P + +G P IK A T++ I +L+TPATL Sbjct: 65 DVLIIACNTATSAAVKTLRERYPELIIIGTEPGIKPALEQTRTKNIGVLATPATLVGEKY 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +L++ ++ + L VE+ G +I+ + +EG D IVL Sbjct: 125 QDLVNVLSAKEEVTLYEQA-CPGLVEQIENG-EIESGKTHDMLEGWLHPMRENDVDTIVL 182 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 CTHYPL+ H ++ ++ + D+IA+R L Sbjct: 183 GCTHYPLVAHKIEEIMKREMNLIHTGDAIAKRLLAL 218 >gi|325284166|ref|YP_004256707.1| Glutamate racemase [Deinococcus proteolyticus MRP] gi|324315975|gb|ADY27090.1| Glutamate racemase [Deinococcus proteolyticus MRP] Length = 365 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 8/224 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL ++R +P+ F Y+AD PYG D ++ RL + L Sbjct: 7 IGVFDSGVGGLSVLAELRRALPDERFCYLADTAHLPYGTRSDDDIR-RLTEAAARWLHGR 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA LR TFP +G VPA+K AA T+SG+I +++TPATLR + Sbjct: 66 GCKALVVACNTASAYGLQHLRGTFPEWPVVGLVPAVKPAALNTRSGVIGVMATPATLRGS 125 Query: 136 YTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + + L +S L VE + + + + D Sbjct: 126 KLQQSVAEWAAPRGVQVMLTTSPKLVPLVERG----EADSPDARALLRQLLRPLAEAGAD 181 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPR 236 +VL CTHYP + R+ +D+ ++AR+ AR L R Sbjct: 182 QLVLGCTHYPFLSGSIRREFKDQFTLVDSGGAVARQTARVLAER 225 >gi|330887861|gb|EGH20522.1| glutamate racemase [Pseudomonas syringae pv. mori str. 301020] Length = 271 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 5/242 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTTEFITERCLTIAGFFREQG 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + + + L +E + +I++ + R D I Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLLHYVEPLLAARCDTI 188 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +L CTHYP + + R++ P V +D ++AR+ + LL R + T D + S Sbjct: 189 ILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGDARDTVYWSSDI 248 Query: 256 PD 257 PD Sbjct: 249 PD 250 >gi|289627915|ref|ZP_06460869.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647290|ref|ZP_06478633.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868901|gb|EGH03610.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 271 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 5/242 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERCLTIAGFFREQG 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + + + L +E + +I++ ++ R D I Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARCDTI 188 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +L CTHYP + + +++ P V +D ++AR+ + LL R + T D + S Sbjct: 189 ILGCTHYPFLKPLLQEMLPESVTLIDTGAAVARQLQRLLSRSSLLATGDARDTVYWSSDI 248 Query: 256 PD 257 PD Sbjct: 249 PD 250 >gi|153847805|ref|ZP_01993956.1| glutamate racemase [Vibrio parahaemolyticus AQ3810] gi|149744710|gb|EDM56178.1| glutamate racemase [Vibrio parahaemolyticus AQ3810] Length = 214 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 92/165 (55%), Gaps = 2/165 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++ Sbjct: 40 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 99 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 100 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 157 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 R YT LI + + L+ S L EE G + DE+K Sbjct: 158 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELK 202 >gi|330817737|ref|YP_004361442.1| Glutamate racemase [Burkholderia gladioli BSR3] gi|327370130|gb|AEA61486.1| Glutamate racemase [Burkholderia gladioli BSR3] Length = 288 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 17/235 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL VL+ +R +P+ F+YVAD PYG +D + +R + + + + Sbjct: 18 VGIFDSGLGGLSVLRAVRAQLPDESFVYVADSRHAPYGERDDAFIIERTLAIGEWLAARG 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R T ++ +G P IK A ++S + +L+T ATLR Sbjct: 78 AKAL-VVACNTATAQSIAVVRETL-AIPLVGVEPGIKPATLASRSRVAGVLATAATLRSA 135 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +LI Y + C L +E G ++ ++G D + Sbjct: 136 RFESLIERYAADCRFLRQPGHGLVEAIERGDTG----SPALRALLDGYLEPMLAAGADTL 191 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 VL CTHYP + R+L+ + +D S++IAR RV +DH L Sbjct: 192 VLGCTHYPFLDATIRELTQDRLTLIDTSEAIAR-----------QLARVLEDHGL 235 >gi|124266488|ref|YP_001020492.1| glutamate racemase [Methylibium petroleiphilum PM1] gi|124259263|gb|ABM94257.1| glutamate racemase [Methylibium petroleiphilum PM1] Length = 276 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 7/220 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + +P +YVAD PYG ++ + +R L + +L + Sbjct: 17 IGVFDSGVGGLSVLRALHRHLPHSRLLYVADSGFAPYGERDEGYVVERSRVLTTHLL-RE 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA LR + F+G P IK A A ++SG I +++T TL Sbjct: 76 GAQLIVVACNTATAAAVRALREEHADVQFVGVEPGIKPAIALSRSGRIGVMATRGTLASD 135 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ S+ +HL + LA +E E+ ++ D + Sbjct: 136 KFRRLVSSHAQGAQLHLQACAGLAHAIEAG----DANSAEVLALVDRYTAPLREAAVDTV 191 Query: 196 VLACTHYPLIV-HVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTHYP + H+ R L V +D +D++ARR + L+ Sbjct: 192 VLGCTHYPFVAQHIQRALGAG-VQLVDTADAVARRVQQLI 230 >gi|104780103|ref|YP_606601.1| glutamate racemase [Pseudomonas entomophila L48] gi|166231049|sp|Q1IEW8|MURI_PSEE4 RecName: Full=Glutamate racemase gi|95109090|emb|CAK13787.1| glutamate racemase [Pseudomonas entomophila L48] Length = 265 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 5/242 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL VL +++ L+P +YVAD PYG +++RL + + ++ Sbjct: 8 IGVMDSGVGGLSVLAEIQRLLPNETLLYVADSGHVPYGEKSPDYIRQRLRHIAGFLREQG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA +LR+ +P +G PA+K AAA T+SG++ +L+T TL+ Sbjct: 68 AKAM-VLACNTATVATVADLRALYPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSA 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + S + L +E + +++ + G + D + Sbjct: 127 KFAALLDRFASDVRVITQPCPGLVECIEAG----DLTSPALRQLLAGYVQPLLAQGCDTL 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +L CTHYP + + + P V +D ++AR+ + LL + + A + S Sbjct: 183 ILGCTHYPFLRPMLADMVPADVAIIDTGAAVARQLQRLLGERDLLADGPARETAFWTSAD 242 Query: 256 PD 257 PD Sbjct: 243 PD 244 >gi|298485684|ref|ZP_07003763.1| Glutamate racemase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159710|gb|EFI00752.1| Glutamate racemase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330988602|gb|EGH86705.1| glutamate racemase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 271 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 5/242 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERCLTIAGFFREQG 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + + + L +E + +I++ + R D I Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLLHYVEPLLAARCDTI 188 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +L CTHYP + + R++ P V +D ++AR+ + LL R + T D + S Sbjct: 189 ILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGDARDTVYWSSDI 248 Query: 256 PD 257 PD Sbjct: 249 PD 250 >gi|213967221|ref|ZP_03395370.1| glutamate racemase [Pseudomonas syringae pv. tomato T1] gi|301381043|ref|ZP_07229461.1| glutamate racemase [Pseudomonas syringae pv. tomato Max13] gi|302060375|ref|ZP_07251916.1| glutamate racemase [Pseudomonas syringae pv. tomato K40] gi|302134865|ref|ZP_07260855.1| glutamate racemase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928063|gb|EEB61609.1| glutamate racemase [Pseudomonas syringae pv. tomato T1] Length = 275 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 5/251 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + +FDSG+GGL VL ++R +P +Y+AD PYG + +R + Sbjct: 9 PVLQNCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERCLI 68 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + +D V+ACNTA +R +P +G PA+K AA T+SG++ +L Sbjct: 69 I-ADFFHGQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T TL+ + L+ + S + L +E + +I++ ++ Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPASVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243 Query: 247 DHALFLSGKPD 257 D + S PD Sbjct: 244 DTVYWSSDIPD 254 >gi|118594500|ref|ZP_01551847.1| glutamate racemase [Methylophilales bacterium HTCC2181] gi|118440278|gb|EAV46905.1| glutamate racemase [Methylophilales bacterium HTCC2181] Length = 267 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 5/217 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GG+ VL+K++ +MP FIYVAD PYG ++KR + ++ Sbjct: 6 SIGVFDSGVGGISVLEKLQQVMPSERFIYVADSKFAPYGQMTSQEIQKRAFIIIDFLIQH 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + L V+ACNTA ELR + ++ +G PA+K A + I IL+T TL+ Sbjct: 66 HSIKLIVVACNTATAACIHELRRNY-NLPIIGMEPAVKPAIFASTKKKIGILATEGTLKS 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 T L+ +Y + ++ + L +E I D K+ I + + DV Sbjct: 125 TKFIALLENYEGEALFYVQPCIGLVELIERGEISI----DSTKRLIHSYLLPLKKNGVDV 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 IVL CTHY I + V +D ++A A Sbjct: 181 IVLGCTHYVFIKEIIEDYFSGTVTVIDTGLAVALHAE 217 >gi|330967413|gb|EGH67673.1| glutamate racemase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 275 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 5/232 (2%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 + P + +FDSG+GGL VL ++R +P +Y+AD PYG + +R Sbjct: 7 SQPVNPGCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERC 66 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + + +D + V+ACNTA +R +P +G PA+K AA T+SG++ Sbjct: 67 LII-ADFFHEQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVG 125 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+T TL+ + L+ + S + L +E + +I++ ++ Sbjct: 126 VLATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYV 181 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R Sbjct: 182 EPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSR 233 >gi|28868327|ref|NP_790946.1| glutamate racemase [Pseudomonas syringae pv. tomato str. DC3000] gi|38257978|sp|Q888B8|MURI_PSESM RecName: Full=Glutamate racemase gi|28851564|gb|AAO54641.1| glutamate racemase [Pseudomonas syringae pv. tomato str. DC3000] gi|331018119|gb|EGH98175.1| glutamate racemase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 275 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 5/253 (1%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 + P + +FDSG+GGL VL ++R +P +Y+AD PYG + +R Sbjct: 7 SQPVNPGCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERC 66 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + + +D V+ACNTA +R +P +G PA+K AA T+SG++ Sbjct: 67 LII-ADFFHGQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVG 125 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+T TL+ + L+ + S + L +E + +I++ ++ Sbjct: 126 VLATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYV 181 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 182 EPLLAARCDTIILGCTHYPFLKPLLREMLPASVTLIDTGAAVARQLQRLLSRSGLLASGP 241 Query: 245 FDDHALFLSGKPD 257 D + S PD Sbjct: 242 ARDTLYWSSDIPD 254 >gi|152996178|ref|YP_001341013.1| glutamate racemase [Marinomonas sp. MWYL1] gi|189030362|sp|A6VX99|MURI_MARMS RecName: Full=Glutamate racemase gi|150837102|gb|ABR71078.1| glutamate racemase [Marinomonas sp. MWYL1] Length = 275 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 103/195 (52%), Gaps = 6/195 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG GGL +L + P +Y+ADD PYG+ L+ RL+ + + + Sbjct: 5 VMDSGAGGLTILNAIHQKHPYLDLVYLADDAFAPYGSKSITQLQDRLVKV-GRFFENEKV 63 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ACNTA D LR++ S+ +G PA+K A ++ +++L+TP T Sbjct: 64 CAIVVACNTATVAAIDALRAS-TSLPIIGVEPAVKPAFRLSKKRRVAVLATPVTAESPRL 122 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + LI + H+ ++SS+ LA ++ + E+++K+ IE E + D +VL Sbjct: 123 NQLIDLWKEDSHVSIMSSLTLAFDIDAWP----ETEEKVKQTIEQLSQEMLAQNIDTLVL 178 Query: 198 ACTHYPLIVHVFRQL 212 ACTHYPL+ H+F Q+ Sbjct: 179 ACTHYPLVKHLFEQI 193 >gi|332530565|ref|ZP_08406502.1| glutamate racemase [Hylemonella gracilis ATCC 19624] gi|332039971|gb|EGI76360.1| glutamate racemase [Hylemonella gracilis ATCC 19624] Length = 276 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 13/232 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I +FDSGIGGL VLQ + +P ++YVAD PYG E + R M + ++ Sbjct: 14 ESPIGVFDSGIGGLSVLQALHAELPHQRYVYVADSGHAPYGEREPQHVIDRTMAVAEYLV 73 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ V+ACNTA + LR+ P + +G PAIK AA ++++ + +L+T TL Sbjct: 74 ARHGIQALVVACNTATAIAIHLLRAEHPHLPLVGLEPAIKPAAQHSRNHRVGVLATRGTL 133 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L S Q L LA +E +++E + + G Sbjct: 134 QSEKFRVLHASLAQQAEFVLQPCDGLAGAIER-------QDEERIATLSAQYASALGPCG 186 Query: 193 ------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTHYPLI R L V +++ +AR+ R +LP I Sbjct: 187 TAPGCIDTVVLGCTHYPLITSQLRALLGPDVVMIESGAPVARQTRRVLPHIG 238 >gi|257482010|ref|ZP_05636051.1| glutamate racemase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008869|gb|EGH88925.1| glutamate racemase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 271 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 5/242 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERCLTIAGFFREQG 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + + + L +E + +I++ + R D I Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPKIRQLLLHYVEPLLAARCDTI 188 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +L CTHYP + + R++ P V +D ++AR+ + LL R + T D + S Sbjct: 189 ILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGDARDTVYWSSDI 248 Query: 256 PD 257 PD Sbjct: 249 PD 250 >gi|320537123|ref|ZP_08037095.1| glutamate racemase [Treponema phagedenis F0421] gi|320145996|gb|EFW37640.1| glutamate racemase [Treponema phagedenis F0421] Length = 267 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 3/227 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K Q DSG GGL LQ + L P+ +YVAD+ FPYG + + Sbjct: 3 KKNEQYQYAFIDSGTGGLPYLQYLHELEPDASMVYVADNAHFPYGKKTKEEVIAFASEMV 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 ++ ++ P + ++ACNT + D LR F ++ F+G VP IK A +++ I IL+T Sbjct: 63 EKLIARFNPEIIIVACNTMSVMALDSLRKKF-TLPFVGTVPGIKLAVKQSRNKRIGILAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ YT LI + S C+ + L +++E+ I +E K I+ + + Sbjct: 122 ERTVCDPYTERLIEEFGSGCYFEKRADQELIAQIEDGL--ITASYEEKLKAIQPALEQFK 179 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 TD I+LACTH+ I VF + + +D + +A + P Sbjct: 180 KANTDSIILACTHFLHIEDVFESAAGSDMQIIDTRSGVIHQALRIAP 226 >gi|320325693|gb|EFW81754.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. B076] gi|320327388|gb|EFW83402.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. race 4] gi|330881879|gb|EGH16028.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. race 4] Length = 271 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 5/242 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERCLTIAGFFREQG 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + + + L +E + +I++ + R D I Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLLHYVEPLLAARCDTI 188 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +L CTHYP + + R++ P V +D ++AR+ + LL R + T + + S Sbjct: 189 ILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGTARETMYWSSDI 248 Query: 256 PD 257 PD Sbjct: 249 PD 250 >gi|27904976|ref|NP_778102.1| glutamate racemase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29839498|sp|P59574|MURI_BUCBP RecName: Full=Glutamate racemase gi|27904374|gb|AAO27207.1| glutamate racemase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 263 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 7/244 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+N I+IFDS +GGL + ++++ P ++IYV D+ FPYG ++ + KR + + S I Sbjct: 3 LKNYIIIFDSSLGGLSIYKQIKKKFPYMNYIYVCDNKNFPYGEKDEIFILKRSIKIISTI 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 K +L ++ACNT L++ F + +G +P + +A T++ +I +L T T Sbjct: 63 TKKITTILVILACNTITVTSLTTLKNFF-NFPIIGVIPNLNKARKITKNNIIGLLGTKIT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Y N I +V + I L+++ L E+ I IK +E K+ Sbjct: 122 IHHYYIQNHISLFVPKYKIKLLANNTLVKIAEQKIKNQLISTKNIKFILEPLL--KKHNM 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+ + +++ P + +D+ I + +L R + +++ F Sbjct: 180 PDTLILGCTHFSFLKEEIKKIFPKKIQIIDSKVHIPKNISTILAR----NLKTTNNNIAF 235 Query: 252 LSGK 255 S K Sbjct: 236 FSKK 239 >gi|70732473|ref|YP_262235.1| glutamate racemase [Pseudomonas fluorescens Pf-5] gi|68346772|gb|AAY94378.1| glutamate racemase [Pseudomonas fluorescens Pf-5] Length = 267 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 5/222 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL +++ L+P +Y D PYG +++R + Sbjct: 7 EAPIGVFDSGVGGLSVLAEIQQLLPHESLLYFGDCGHIPYGEKTPEFIRQRCSLMARFFR 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA +LR +P +G PA+K AAA T+SG++ +L+T TL Sbjct: 67 EQGAKAL-VLACNTATVAGVADLRRDYPDWPIVGMEPAVKPAAAATRSGVVGVLATTGTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +++ + G Sbjct: 126 QSAKFAALLDRFATDVKVVTQPCPGLVEMIENG----DLHSAALRQLLHGYLEPLLAAGC 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D I+L CTHYP + + Q+ P P+ +D ++AR+ + LL Sbjct: 182 DTIILGCTHYPFLKPLLAQMLPGPISLIDTGAAVARQLQRLL 223 >gi|295698712|ref|YP_003603367.1| glutamate racemase [Candidatus Riesia pediculicola USDA] gi|291157340|gb|ADD79785.1| glutamate racemase [Candidatus Riesia pediculicola USDA] Length = 270 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 5/211 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 ILI DSG+GGL V + + +P + YV D+ FPYGN ++ + KR++ L I Sbjct: 10 ILILDSGLGGLSVYKYLVRKLPNLSYTYVFDNEFFPYGNRKESFIIKRVIRLIDQIQRDR 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + + ++ACNT + + L+ F LG+VP I A +T++ +I +L+T T+ Sbjct: 70 EFEIIILACNTVSVVSINILKDIFSDYIILGSVPEIDVAIQFTKNKVIYVLATKRTIE-- 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y N + Y + IHLVSS L +EE G I +++I ++ + D I Sbjct: 128 YIRNKVSFYSKEFKIHLVSSSKLVRMIEEKIRGKIILKNKIYSILKNL---SNHQIPDTI 184 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 VL CTHY I ++ P ++ +D+ +I Sbjct: 185 VLGCTHYSFISKEIKEAFPKCINLIDSKKNI 215 >gi|253997247|ref|YP_003049311.1| glutamate racemase [Methylotenera mobilis JLW8] gi|253983926|gb|ACT48784.1| glutamate racemase [Methylotenera mobilis JLW8] Length = 270 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 6/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GG+ VLQ + L+P +YVAD PYGN ++ R + +D L Sbjct: 12 QRPIAVFDSGVGGISVLQHIHTLLPNEQLLYVADSKYAPYGNKSPAEIQARCTEI-TDFL 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ACNTA D +R + ++ +G PA+K AA +++G+I +L+T TL Sbjct: 71 IANHAKAIVVACNTATAAAIDMMREKY-TLPIIGMEPAVKPAATASRNGIIGVLATTGTL 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ SY + + + L VE ++K + E Sbjct: 130 KSAQFAGLLESYGRNVKVVTQACVGLVECVERGELQADATLQLVQKYCQPLLDEG----A 185 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D IVL CTHYP + + Q+ V +D ++A++ Sbjct: 186 DTIVLGCTHYPFVRPLIEQVVGAQVSLIDTGAAVAKQ 222 >gi|299768328|ref|YP_003730354.1| glutamate racemase [Acinetobacter sp. DR1] gi|298698416|gb|ADI88981.1| glutamate racemase [Acinetobacter sp. DR1] Length = 266 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 5/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T T+ Sbjct: 65 AQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +LI +Y + LV + LA ++E K +E+K +E ++ Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTEEVKDYLENILAPLVEQKV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D I+L CTHYP + +++ + ++ S+++ + Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216 >gi|163815643|ref|ZP_02207016.1| hypothetical protein COPEUT_01818 [Coprococcus eutactus ATCC 27759] gi|158449280|gb|EDP26275.1| hypothetical protein COPEUT_01818 [Coprococcus eutactus ATCC 27759] Length = 255 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 113/231 (48%), Gaps = 12/231 (5%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GG+ VL+ + LMP ++IY D PYG A+ +R + +L K Sbjct: 5 SIGVFDSGLGGISVLRDIVELMPYENYIYFGDSAHAPYGTKTREAILERSEQCTNFLLAK 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA ++ LR +PS+ +G PA+K A + + +++++TPATL Sbjct: 65 DVKAI-VIACNTATSVAASTLRQQYPSIPIIGIEPALKPAVLWKEHDKVAVMATPATLAL 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ Y + I+ + LA VE GI +EI + + K+ D Sbjct: 124 PKFHELMKHYSKESDIYPIPCPGLADYVER---GI-FDGEEITEFLRELLAPYLAKKIDA 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA-------RRARCLLPRIN 238 IVL CTHYP + V ++++ V + + A R A L P I Sbjct: 180 IVLGCTHYPFVEKVIKRIAGPDVKIFNGAHGTALELQRRLRIAELLTPSIE 230 >gi|307822892|ref|ZP_07653122.1| glutamate racemase [Methylobacter tundripaludum SV96] gi|307735667|gb|EFO06514.1| glutamate racemase [Methylobacter tundripaludum SV96] Length = 270 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 6/218 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N I +FDSG+GGL VL ++R +P +YVAD PYG+ ++ R + + ++ Sbjct: 5 NPIGVFDSGVGGLSVLHEIRRALPGEDLLYVADSAHAPYGDKSQQFIENRSIAITEFLVS 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + V+ACNTA LRS F SM + PA+K A+ ++SG+I +L+T TL Sbjct: 65 RNAKAI-VVACNTATGAAITTLRSRF-SMPIIAMEPAVKPASENSKSGVIGVLATSRTLA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L Y + I + L +VE + D+ + +E + + D Sbjct: 123 SDNFVKLFARYGADVEILGQACPGLVEQVEAG----DLSGDKTRILLERYVLPLLERGAD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +VL CTHYP + + RQ++ V +D++ ++AR+ R Sbjct: 179 TLVLGCTHYPFLAPLIRQIAGPGVTVIDSAAAVARQLR 216 >gi|162147611|ref|YP_001602072.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5] gi|161786188|emb|CAP55770.1| putative glutamate racemase [Gluconacetobacter diazotrophicus PAl 5] Length = 224 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 90/172 (52%), Gaps = 1/172 (0%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + +D P L VIACNTA TL LR + ++ F+G VP IK AA +++ I +L+ Sbjct: 9 YGRAIDALDPDLVVIACNTASTLALPALRERY-TLPFVGCVPPIKWAAELSRTRTIGLLA 67 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+RR Y +L Y C + + LA E G I D I +E++ F + Sbjct: 68 TRATVRRPYLGDLQRRYAPDCTLLAHGARGLADLAECAFRGHAIATDAIDRELDALFGQP 127 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 G DV+ + CTHY ++ R SP WLD ++++AR+A +L + T Sbjct: 128 GGAAIDVVGIGCTHYTFLMDRLRAASPPGTIWLDPAEAVARQAATVLGPLGT 179 >gi|167578823|ref|ZP_02371697.1| glutamate racemase [Burkholderia thailandensis TXDOH] Length = 290 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 6/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ Sbjct: 15 RSPIGIFDSGLGGLSVLRAVRERLPDEAIVYVADSRHAPYGPRDDAFIIERTLAIGEWLV 74 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA +R P + +G P IK AA ++++ + +L+T ATL Sbjct: 75 AQGAKAL-VIACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R LI + + C + L +E G E++ ++ G Sbjct: 133 RSARFEALIARHAADCRFICQAGHGLVEAIERGDTG----SPELRAQLAGFLEPMLEAGA 188 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D +VL CTHYP + R ++ + +D SD+IAR+ Sbjct: 189 DTLVLGCTHYPFLDAAIRDVTSSRLHLIDTSDAIARQ 225 >gi|317969725|ref|ZP_07971115.1| glutamate racemase [Synechococcus sp. CB0205] Length = 278 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 5/213 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL + +++ +P +YVAD PYG+ ++ + + +D L Sbjct: 6 IGLFDSGVGGLSIWRQVVHALPSESLLYVADQANVPYGHRSADEIQANSLGI-ADYLVAQ 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + + LR FP + LG PA+K A T+SG++ +++TPAT + Sbjct: 65 GCKAIVLACNTASAVALEPLRQRFPQLPILGLEPAVKPAVQLTRSGVVGVMATPATFQGQ 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + Y + + + LA VE+ ++ + + G D I Sbjct: 125 LYRATVGRYATAVQVVEQVCVGLAELVEQG----DLEGPDCDARLMGYLQPMLDAGADTI 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 VL CTHYP ++ R+L + LD + ++AR Sbjct: 181 VLGCTHYPFVIESIRRLVGPAMAVLDPAPAVAR 213 >gi|311087439|gb|ADP67519.1| glutamate racemase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087930|gb|ADP68009.1| glutamate racemase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 262 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 17/234 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y Sbjct: 1 MLIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNT T+ LR F + G P IK A T++ +I +++T AT+ + Sbjct: 61 PINIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK------EIEGCFIEKEG 189 YT +I+ Y I ++ + LA E+ G+ + + ++K + C Sbjct: 120 YTQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWINLPTC------ 173 Query: 190 KRTDVIVLACTHYPLIVHVFRQL--SPWPVDWLDNSDSIARRARCLLPRINTHQ 241 D I+L CTH+ L+ + + V ++D+ + + + L N +Q Sbjct: 174 --PDTIILGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSYLKTSNVNQ 225 >gi|325474017|gb|EGC77205.1| glutamate racemase [Treponema denticola F0402] Length = 271 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 120/244 (49%), Gaps = 16/244 (6%) Query: 13 QNSILIF-DSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 QN +F DSGIGGL L+ ++ L P+ YVAD FPYG + + L I Sbjct: 5 QNVQYVFIDSGIGGLPYLRHLKELEPQSSCAYVADTKHFPYGEKTLEEVIEYTEDLVKKI 64 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++K +P + +IACNT LR F + F+G VPAIK AA +++ I++L+T T Sbjct: 65 IEKLKPSVIIIACNTMTVSALSHLRKKF-EIPFVGTVPAIKPAALTSKNKKIAVLATERT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEIKKEIEGCFIEKEG 189 + Y NLI + + C + + +L S++E + + K+ I+ +E F + G Sbjct: 124 VNDIYVQNLIEEFGADCKFFMRADSVLVSKIENTLLSGSEEDKKAGIRPAVE--FFKSAG 181 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--------RINTHQ 241 TD VL CTH+ + F+ + +D+ D + +A + P ++N Q Sbjct: 182 --TDTAVLGCTHFLHLRDEFKSECEPDIKIVDSLDGVVNQALKISPPQKSKTDEKLNNIQ 239 Query: 242 TRVF 245 +F Sbjct: 240 KDIF 243 >gi|330961731|gb|EGH61991.1| glutamate racemase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 271 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 5/219 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 16 VFDSGVGGLSVLNEIRQLLPNESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFHEQGAK 75 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 76 AL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + S + L +E + +I+ + R D ++L Sbjct: 135 AALLDRFASDVRVVTQPCPGLVELIESG----DLVSPQIRALLSRYVEPLLAARCDTVIL 190 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 CTHYP + + R++ P V +D ++AR+ + LL R Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSR 229 >gi|302338969|ref|YP_003804175.1| glutamate racemase [Spirochaeta smaragdinae DSM 11293] gi|301636154|gb|ADK81581.1| glutamate racemase [Spirochaeta smaragdinae DSM 11293] Length = 261 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 5/193 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I FDSGIGGL LQ +R +P + + Y+AD FPYG L ++ Sbjct: 2 KNTGPIAFFDSGIGGLPYLQWVRKKLPNFSYRYLADRANFPYGEKSIEELGGLIIGSMER 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +++ P + V+ACNTA +LR TF S+ F+G VPAIK AAA + + I +L+T Sbjct: 62 YIERVDPSIVVVACNTASVTALQKLRDTF-SVPFVGVVPAIKPAAALSCTHTIGLLATKR 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE-DEIKKEIEGCFIEKEG 189 T+ YT NL+ + + + + + VE + + E E+ F EKE Sbjct: 121 TVEDPYTDNLVRLFADGFQVERFAGVDIVDFVENHLLDAEPHEIREVLAPAVAFFSEKE- 179 Query: 190 KRTDVIVLACTHY 202 D +VL CTH+ Sbjct: 180 --VDTLVLGCTHF 190 >gi|83716465|ref|YP_440215.1| glutamate racemase [Burkholderia thailandensis E264] gi|167616909|ref|ZP_02385540.1| glutamate racemase [Burkholderia thailandensis Bt4] gi|257140841|ref|ZP_05589103.1| glutamate racemase [Burkholderia thailandensis E264] gi|83650290|gb|ABC34354.1| glutamate racemase [Burkholderia thailandensis E264] Length = 288 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 6/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ Sbjct: 14 RSPIGIFDSGLGGLSVLRAVRERLPDEAIVYVADSRHAPYGPRDDAFIIERTLAIGEWLV 73 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL Sbjct: 74 AQGAKAL-VVACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 131 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R LI + + C + L +E G E++ ++ G Sbjct: 132 RSARFEALIARHAADCRFICQAGHGLVEAIERGDTG----SPELRAQLAGFLEPMLEAGA 187 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D +VL CTHYP + R ++ + +D SD+IAR+ Sbjct: 188 DTLVLGCTHYPFLDAAIRDVTSSRLHLIDTSDAIARQ 224 >gi|219682454|ref|YP_002468838.1| glutamate racemase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254766111|sp|B8D878|MURI_BUCAT RecName: Full=Glutamate racemase gi|219622187|gb|ACL30343.1| glutamate racemase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086275|gb|ADP66357.1| glutamate racemase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 262 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 17/234 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y Sbjct: 1 MLIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNT T+ LR F + G P IK A T++ +I +++T AT+ + Sbjct: 61 PINIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK------EIEGCFIEKEG 189 YT +I+ Y I ++ + LA E+ G+ + + ++K + C Sbjct: 120 YTQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWINLPTC------ 173 Query: 190 KRTDVIVLACTHYPLIVHVFRQL--SPWPVDWLDNSDSIARRARCLLPRINTHQ 241 D I+L CTH+ L+ + + V ++D+ + + + L N +Q Sbjct: 174 --PDTIILGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSCLKTSNVNQ 225 >gi|262280557|ref|ZP_06058341.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202] gi|262258335|gb|EEY77069.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202] Length = 266 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 5/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNT + + +R+ ++ + PA+K A A T S I++L+T T+ Sbjct: 65 AQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAMTMSKHIAVLATATTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + NLI +Y + LV + LA ++E K E+K ++ ++ Sbjct: 124 KGKNLQNLIETYAQNIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D I+L CTHYP + ++ + L + ++ S+++ + Sbjct: 180 DTIILGCTHYPFVSNIIQDLVGSNIQIIEPSEAVTAQ 216 >gi|213159142|ref|YP_002321140.1| glutamate racemase [Acinetobacter baumannii AB0057] gi|213058302|gb|ACJ43204.1| glutamate racemase [Acinetobacter baumannii AB0057] Length = 266 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 5/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T T+ Sbjct: 65 TQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +LI +Y + LV + LA ++E K E+K +E ++ Sbjct: 124 KGQKLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAYTAEVKDYLENILAPLVEQKV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D I+L CTHYP + +++ + ++ S+++ + Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216 >gi|319794071|ref|YP_004155711.1| glutamate racemase [Variovorax paradoxus EPS] gi|315596534|gb|ADU37600.1| glutamate racemase [Variovorax paradoxus EPS] Length = 265 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 15/226 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL VL +R +P F+Y AD PYG D + +R + ++ ++ Sbjct: 4 VGVFDSGVGGLSVLAALRAELPHERFVYFADTAFAPYGERGDDYVIERSRKVTEQLIAEH 63 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA T LR+ P++ +G PA+K A A +++G IS+++T TL Sbjct: 64 GIGALVVACNTATTAAIHLLRAEHPALPIVGLEPALKPAVATSRTGHISVMATRGTLASA 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVE-------EYACGIKIKEDEIKKEIEGCFIEKE 188 + L S+ + V L +E C + E G F + Sbjct: 124 KYAALRDSFAGSATVRAVPCDGLVKAIEGLDTEAIATLCARYMAE-------AGPFGDAA 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 G+ D +VL CTHYPL+ ++ +P + ++D +A++ R +L Sbjct: 177 GE-VDTVVLGCTHYPLVKDQLQRHAPATLRFIDTGAPVAQQTRRVL 221 >gi|169794284|ref|YP_001712077.1| putative glutamate racemase [Acinetobacter baumannii AYE] gi|215481842|ref|YP_002324024.1| glutamate racemase [Acinetobacter baumannii AB307-0294] gi|301347985|ref|ZP_07228726.1| glutamate racemase [Acinetobacter baumannii AB056] gi|301512532|ref|ZP_07237769.1| glutamate racemase [Acinetobacter baumannii AB058] gi|332850363|ref|ZP_08432697.1| glutamate racemase [Acinetobacter baumannii 6013150] gi|332871530|ref|ZP_08440024.1| glutamate racemase [Acinetobacter baumannii 6013113] gi|169147211|emb|CAM85070.1| putative glutamate racemase [Acinetobacter baumannii AYE] gi|213986873|gb|ACJ57172.1| glutamate racemase [Acinetobacter baumannii AB307-0294] gi|332730821|gb|EGJ62131.1| glutamate racemase [Acinetobacter baumannii 6013150] gi|332731384|gb|EGJ62676.1| glutamate racemase [Acinetobacter baumannii 6013113] Length = 266 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 5/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T T+ Sbjct: 65 TQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +LI +Y + LV + LA ++E K E+K +E ++ Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAYTAEVKDYLENILAPLVEQKV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D I+L CTHYP + +++ + ++ S+++ + Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216 >gi|254428102|ref|ZP_05041809.1| glutamate racemase [Alcanivorax sp. DG881] gi|196194271|gb|EDX89230.1| glutamate racemase [Alcanivorax sp. DG881] Length = 263 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 128/257 (49%), Gaps = 13/257 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL + +++R L+P + +YVAD + PYG +H +++R + +++ Sbjct: 7 IGIFDSGIGGLSIARRIRELLPNENLLYVADSIHAPYGEKSEHYIQQRSDAITRFLMENE 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA +LR+ + ++ +G P IK AA ++SG+I +L+T TL+ Sbjct: 67 AKAI-VVACNTATVSAIRQLRADY-TLPIIGVEPGIKPAALQSKSGVIGVLATSQTLKSE 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL + + + L ++E + + + + ++ K D I Sbjct: 125 SFNNLSRLFSENVRVEIQPCPGLVEQIEALELDSEATQTLVARYVQPLI----QKGADHI 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA----LF 251 VL CTHY + + R+ + V+ ++ ++AR + R+ H A + Sbjct: 181 VLGCTHYAFLAPLIRRAAGAHVEVVNTDMAVARET---VRRLQMHNLLSDSPQAGSATFW 237 Query: 252 LSGKPDIAMRRLMQGFG 268 S +P +A R+L + +G Sbjct: 238 SSAEPSLAHRQLSELWG 254 >gi|311086850|gb|ADP66931.1| glutamate racemase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 262 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 17/234 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y Sbjct: 1 MLIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNT T+ LR F + G P IK A T++ +I +++T AT+ + Sbjct: 61 PINIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK------EIEGCFIEKEG 189 YT +I+ Y I ++ + LA E+ G+ + + ++K + C Sbjct: 120 YTQKIIYEYSYSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWINLPTC------ 173 Query: 190 KRTDVIVLACTHYPLIVHVFRQL--SPWPVDWLDNSDSIARRARCLLPRINTHQ 241 D I+L CTH+ L+ + + V ++D+ + + + L N +Q Sbjct: 174 --PDTIILGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSCLKTSNVNQ 225 >gi|42526956|ref|NP_972054.1| glutamate racemase, putative [Treponema denticola ATCC 35405] gi|41817271|gb|AAS11965.1| glutamate racemase, putative [Treponema denticola ATCC 35405] Length = 271 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 8/226 (3%) Query: 13 QNSILIF-DSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 QN +F DSGIGGL L+ ++ L P+ YVAD FPYG + + L I Sbjct: 5 QNVQYVFIDSGIGGLPYLRHLKELEPQSSCAYVADTKHFPYGEKTLEDVIEYTEDLVKKI 64 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++K +P + +IACNT LR F + F+G VPAIK AA +++ I++L+T T Sbjct: 65 IEKLKPSVIIIACNTMTVSALSHLRKKF-EIPFVGTVPAIKPAALTSKNKKIAVLATERT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEIKKEIEGCFIEKEG 189 + Y NLI + + C + + +L S++E + + K+ I+ +E F + G Sbjct: 124 VNDIYVQNLIEEFGADCKFFMRADSVLVSKIENTLLSGSEEDKKAGIRPAVE--FFKSAG 181 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 TD VL CTH+ + F+ + +D+ D + +A + P Sbjct: 182 --TDTAVLGCTHFLHLRDEFKSECEPDIKIVDSLDGVVNQALKISP 225 >gi|301301177|ref|ZP_07207333.1| glutamate racemase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851176|gb|EFK78904.1| glutamate racemase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 256 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 7/223 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K L F + L Y Sbjct: 9 IGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQK-LSFEKVEHLLSY 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP TL+ Sbjct: 68 NCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPLTLKEK 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 ++L++ YV++ I + + L +E E ++K + K +D I Sbjct: 128 KFNDLMNKYVTEADIRKIPAPDLVEFIESGDVDSPELETYLRKLLNPY------KDSDSI 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 VL CTH+P V +++ +D + AR + LL + N Sbjct: 182 VLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSN 224 >gi|302877351|ref|YP_003845915.1| glutamate racemase [Gallionella capsiferriformans ES-2] gi|302580140|gb|ADL54151.1| glutamate racemase [Gallionella capsiferriformans ES-2] Length = 266 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 17/231 (7%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM----FLFS 69 +I +FDSG+GGL VL+ +R L+P IYVAD PYG+ +++R + FL S Sbjct: 6 GAIGVFDSGVGGLSVLRHIRQLLPNERLIYVADSAHVPYGDKSARYIEQRSIELTRFLIS 65 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 D VIACNTA LR F S +G PA+K A A T++G++ +L+T Sbjct: 66 QGADAI-----VIACNTATAAAAATLRRDF-SCPIIGMEPAVKPAVAATKNGIVGVLATI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TL S L+ Y I L +VE + + +++ ++G Sbjct: 120 GTLESARFSALLERYAGNVTIVTQGCPGLVEQVERGDLTGPLTRELVERYTTPLL--EQG 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 D ++L CTHYP + + R ++ + +D +++AR LL R+ T Sbjct: 178 --ADTLILGCTHYPFLAGLIRDIAGQDIQLIDTGEAVARH---LLRRLQTE 223 >gi|91787921|ref|YP_548873.1| glutamate racemase [Polaromonas sp. JS666] gi|91697146|gb|ABE43975.1| glutamate racemase [Polaromonas sp. JS666] Length = 281 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 107/235 (45%), Gaps = 17/235 (7%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I +FDSGIGGL +L+ +R +P +F+YVAD PYG ED + R + +L Sbjct: 4 QAIGVFDSGIGGLSILKALRAELPHENFVYVADSGHAPYGEREDCFVVARSRAITRHLLT 63 Query: 74 KYQPVLS--VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + VIACNTA LR P++ +G PA+K A +++ I +++T T Sbjct: 64 QQHVKVKALVIACNTATAAAIHLLREEHPNLPIIGVEPALKPATLLSRTRRIGVMATRGT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED-----EI------KKEI 180 L L S Q L LA +E GI K D EI Sbjct: 124 LASARFKRLRDSLAGQAEFVLQPCDGLADAIER---GIDDKADPGSATEILAACAHHTRA 180 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 G F EG+ D +VL CTHYP R L V +LD +AR+ R LP Sbjct: 181 MGPFGLNEGE-IDTLVLGCTHYPFASEHLRALLGPHVQFLDTGAPVARQTRLRLP 234 >gi|110835225|ref|YP_694084.1| glutamate racemase [Alcanivorax borkumensis SK2] gi|110648336|emb|CAL17812.1| glutamate racemase [Alcanivorax borkumensis SK2] Length = 263 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 10/255 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL + +++R L+P + +YVAD V PYG +H +++R + ++D Sbjct: 7 IGVFDSGIGGLSIARRIRELLPHENLLYVADSVHAPYGEKAEHYIQQRADTITRFLIDNN 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA +LR+ + ++ +G P IK AA ++SG+I +L+T TL+ Sbjct: 67 AKAI-VVACNTATVSAIRQLRADY-TLPIIGVEPGIKPAALKSKSGVIGVLATSQTLKSE 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL + + + L ++E + + + + + IEK D I Sbjct: 125 SFNNLSRLFSESVCVEIQPCPGLVEQIEVLDLDSEKTQALVARYV-APLIEKGA---DHI 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHY + V R+++ + ++ ++AR L N T V F S Sbjct: 181 VLGCTHYAFLAPVIRRIAGAGIQVVNTDIAVARETLRRLQNANRLSTSVAPGQMAFWSSA 240 Query: 256 ----PDIAMRRLMQG 266 D ++RL G Sbjct: 241 ANELADQQIKRLWDG 255 >gi|320335009|ref|YP_004171720.1| glutamate racemase [Deinococcus maricopensis DSM 21211] gi|319756298|gb|ADV68055.1| Glutamate racemase [Deinococcus maricopensis DSM 21211] Length = 279 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 8/222 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL +R +P ++Y+AD PYG D ++ L + L + Sbjct: 12 IGVFDSGVGGLSVLAALRRELPNEDYLYLADTAHVPYGPRADDDIRD-LTGRAARWLFDH 70 Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA LR+ + +G VPA+K A A T+SG+I +L+TPATLR Sbjct: 71 GAKSVVVACNTASAFSLAPLRAWAGDARPVVGLVPAVKPAVAATRSGVIGVLATPATLRG 130 Query: 135 TYTSNLIHSYVSQCHIHLV--SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +++ + + + +V + + L VE +++ ++ G Sbjct: 131 ALLQDVVAQHATPRGVRVVPCADLRLVPLVESGLADAPETLAALRETLDPVV----GAGA 186 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYP + R L + D+ +ARR R +L Sbjct: 187 DALVLGCTHYPFLTSALRHLYGPDLALFDSGAGVARRTRAVL 228 >gi|332291481|ref|YP_004430090.1| glutamate racemase [Krokinobacter diaphorus 4H-3-7-5] gi|332169567|gb|AEE18822.1| glutamate racemase [Krokinobacter diaphorus 4H-3-7-5] Length = 268 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 22/261 (8%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-------KKRLM 65 + +I +FDSGIGG + +++ +P + IY+AD PYG + ++L+ Sbjct: 4 KGNIGLFDSGIGGTSIWKEVVTHLPYENTIYLADSKHAPYGAKSKEEIIALSVKNTEKLI 63 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125 L + I+ V+ACNTA T D LR + + F+G PAIK AA +++ I I Sbjct: 64 QLGAKII--------VVACNTATTNAIDYLRKNY-DIPFIGIEPAIKPAALNSKNKTIGI 114 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T TL T + + + V L +E E + KE+ ++ Sbjct: 115 LATKGTLNSTLFQDTSEKWTQGTKVIEVIGEGLVPLIERGDL-----ESSVLKELLKSYV 169 Query: 186 EKE-GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 ++ D +VL C+HYP ++ + +L P V +D+ ++AR+ + +L I +T Sbjct: 170 APMITQKIDYLVLGCSHYPYLIPLLTELLPEEVTIIDSGLAVARQTKSVLTEIKALETAT 229 Query: 245 FDDHALFLSGKPDIAMRRLMQ 265 +H LF +G P I + L++ Sbjct: 230 TGNHQLFTNGDPSILKKVLVR 250 >gi|219681899|ref|YP_002468285.1| glutamate racemase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471604|ref|ZP_05635603.1| glutamate racemase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254766110|sp|B8D9X6|MURI_BUCA5 RecName: Full=Glutamate racemase gi|219624742|gb|ACL30897.1| glutamate racemase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 262 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 116/234 (49%), Gaps = 17/234 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y Sbjct: 1 MLIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNT T+ LR F + G P IK A T++ +I +++T AT+ + Sbjct: 61 PINIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK------EIEGCFIEKEG 189 YT I+ Y I ++ + LA E+ G+ + + ++K + C Sbjct: 120 YTQKTIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWINLPTC------ 173 Query: 190 KRTDVIVLACTHYPLIVHVFRQL--SPWPVDWLDNSDSIARRARCLLPRINTHQ 241 D I+L CTH+ L+ + + V ++D+ + + + L N +Q Sbjct: 174 --PDTIILGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSYLKTSNVNQ 225 >gi|167565061|ref|ZP_02357977.1| glutamate racemase [Burkholderia oklahomensis EO147] Length = 290 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 6/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + + + Sbjct: 18 IGIFDSGLGGLSVLRAVRARLPDEALVYVADSRHAPYGPRDDAFIVERTLAIGEWLAAQG 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR T Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRST 135 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI + C + L VE G E++ + G D + Sbjct: 136 RFEALIARHADDCRFICQAGHGLVEAVERGDTG----SPELRALLTGYLEPMLAAGADTL 191 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VL CTHYP + R ++ + +D SD+IAR+ Sbjct: 192 VLGCTHYPFLDAAIRDVASDRLHLIDTSDAIARQ 225 >gi|15617147|ref|NP_240360.1| glutamate racemase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11386924|sp|P57619|MURI_BUCAI RecName: Full=Glutamate racemase gi|25291667|pir||F84994 glutamate racemase (EC 5.1.1.3) [imported] - Buchnera sp. (strain APS) gi|10039212|dbj|BAB13246.1| glutamate racemase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 262 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 15/196 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y Sbjct: 1 MLIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNT T+ LR F + G P IK A T++ +I +++T AT+ + Sbjct: 61 PINVVVIACNTISTVALSILRKKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK------EIEGCFIEKEG 189 YT +I+ Y I ++ + LA E+ G+ + + ++K + C Sbjct: 120 YTQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWINLPTC------ 173 Query: 190 KRTDVIVLACTHYPLI 205 D I+L CTH+ L+ Sbjct: 174 --PDTIILGCTHFSLL 187 >gi|121595188|ref|YP_987084.1| glutamate racemase [Acidovorax sp. JS42] gi|120607268|gb|ABM43008.1| glutamate racemase [Acidovorax sp. JS42] Length = 291 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 11/229 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VLQ +R +P HF+Y+AD PYG+ + A ++ + L ++ Sbjct: 10 IGVFDSGIGGLSVLQALRHELPHEHFVYLADSGNAPYGDAKGDAFVQQRTLAIARWLREH 69 Query: 76 QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + V+ACNTA ++LR+ P + +G PA+K AAA +Q+ + +L+T T+ Sbjct: 70 HGIKALVVACNTATAAAVEQLRAALPDLPAIGVEPALKPAAASSQTHHVGVLATRGTVGS 129 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE--------YACGIKIKEDEIK-KEIEGCFI 185 L + + + LA +E+ A KI+ ++ G F Sbjct: 130 ARFQRLRDGHSAGTRFSVQPCDGLARAIEQSTEEPLPAAASMAKIEALCVQYTGALGTFG 189 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 K G+ D +VL CTHY + R L V +D +AR+ R +L Sbjct: 190 LKTGE-IDTLVLGCTHYVFAKDMLRALVGPDVQIIDTGAPVARQTRRIL 237 >gi|296132631|ref|YP_003639878.1| glutamate racemase [Thermincola sp. JR] gi|296031209|gb|ADG81977.1| glutamate racemase [Thermincola potens JR] Length = 270 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 6/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG+ VL+ M L+P FIY AD + PYG ++ + + + ++DK Sbjct: 10 IGIFDSGVGGISVLKDMVQLLPNEKFIYYADSLNAPYGTKDNETIARLSRNVARFLVDKG 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA + ++LR+ + +G PA+K A + G + +++TP TL++ Sbjct: 70 IKTL-VVACNTATAVAINQLRAEL-DIPVIGMEPAVKPAVELGKEGKVLVMATPVTLKQE 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+H Y + + L VE+ GI + EIK+ + + + V+ Sbjct: 128 KFNKLLHRYDEHSRVIPLPCPGLVELVEK---GI-TQGKEIKEYLSKLLANIQRDQIAVV 183 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VL CTHY + +Q P + +D + A+R Sbjct: 184 VLGCTHYVFVRDTIKQFFPSQIPVIDGNCGTAKR 217 >gi|300214554|gb|ADJ78970.1| Glutamate racemase [Lactobacillus salivarius CECT 5713] Length = 256 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 13/226 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K L F + L Y Sbjct: 9 IGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQK-LSFEKVEHLLSY 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP TL+ Sbjct: 68 NCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPLTLKEK 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK---EGKRT 192 ++L++ YV++ I + + L +E D E+E +++K K + Sbjct: 128 KFNDLMNKYVTKADIRKIPAPDLVEFIESG--------DVDSPELE-TYLQKLLSPYKDS 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D IVL CTH+P V +++ +D + AR + LL + N Sbjct: 179 DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSN 224 >gi|227890834|ref|ZP_04008639.1| glutamate racemase [Lactobacillus salivarius ATCC 11741] gi|227867243|gb|EEJ74664.1| glutamate racemase [Lactobacillus salivarius ATCC 11741] Length = 256 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 13/226 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K L F + L Y Sbjct: 9 IGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQK-LSFEKVEHLLSY 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP TL+ Sbjct: 68 NCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPLTLKEK 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK---EGKRT 192 ++L++ YV++ I + + L +E D E+E +++K K + Sbjct: 128 KFNDLMNKYVTKADIRKIPAPDLVEFIESG--------DVDSPELE-TYLQKLLSPYKDS 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D IVL CTH+P V +++ +D + AR + LL + N Sbjct: 179 DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSN 224 >gi|222111527|ref|YP_002553791.1| glutamate racemase [Acidovorax ebreus TPSY] gi|221730971|gb|ACM33791.1| glutamate racemase [Acidovorax ebreus TPSY] Length = 291 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 11/229 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VLQ +R +P HF+Y+AD PYG+ + A ++ + L ++ Sbjct: 10 IGVFDSGIGGLSVLQALRHELPHEHFVYLADSGNAPYGDAKGDAFVQQRTLAIARWLREH 69 Query: 76 QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + V+ACNTA ++LR+ P + +G PA+K AAA +Q+ + +L+T T+ Sbjct: 70 HGIKALVVACNTATAAAVEQLRAALPDLPAIGVEPALKPAAASSQTHHVGVLATRGTVGS 129 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE--------YACGIKIKEDEIK-KEIEGCFI 185 L + + + LA +E+ A KI+ ++ G F Sbjct: 130 ARFQRLRDGHSAGTRFSVQPCDGLARAIEQSTEEPLPAAASMAKIEALCVQYTGALGTFG 189 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 K G+ D +VL CTHY + R L V +D +AR+ R +L Sbjct: 190 LKTGE-IDTLVLGCTHYVFAKDMLRALVGPDVQIIDTGAPVARQTRRIL 237 >gi|238028090|ref|YP_002912321.1| glutamate racemase [Burkholderia glumae BGR1] gi|237877284|gb|ACR29617.1| Glutamate racemase [Burkholderia glumae BGR1] Length = 286 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 17/233 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL+ R +P+ F+YVAD PYG +D + +R + + + + Sbjct: 18 IFDSGLGGLSVLRAARAHLPDEAFVYVADSRYAPYGERDDAFIIERTLAIGEWLAARGAK 77 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA +R T ++ +G P IK AA + S + +L+T ATLR Sbjct: 78 AL-VVACNTATAQSIAVVRETL-AIPLIGVEPGIKPAALASTSRVAGVLATAATLRSARF 135 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 LI + C L L +E G ++ + G D +VL Sbjct: 136 EALIARHAGDCRFLLQPGHGLVQAIERGDTG----SAGLRTLLAGYLEPMLAAGADTLVL 191 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 CTHYP + R+L+ + +D ++IAR RV D+H L Sbjct: 192 GCTHYPFLDATIRELTQNRLTLVDTGEAIAR-----------QLARVLDEHGL 233 >gi|71733288|ref|YP_273271.1| glutamate racemase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71553841|gb|AAZ33052.1| glutamate racemase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 271 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 5/242 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++ Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERCLTIAGFFREQG 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + + + L +E + +I++ + D I Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRRLLLHYVEPLLAACCDTI 188 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +L CTHYP + + R++ P V +D ++AR+ + LL R + T + + S Sbjct: 189 ILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGTARETMYWSSDI 248 Query: 256 PD 257 PD Sbjct: 249 PD 250 >gi|254497879|ref|ZP_05110644.1| glutamate racemase [Legionella drancourtii LLAP12] gi|254352877|gb|EET11647.1| glutamate racemase [Legionella drancourtii LLAP12] Length = 270 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 8/227 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q ++ +FDSG+GGL VL+ ++ +P FIY+ D PYG +K+ M + ++ Sbjct: 5 QLAVGVFDSGMGGLTVLRALKESLPHESFIYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 +++ L VIACNTA T L+S P M LG V P A A T++ +++L+T T Sbjct: 65 ERHIKAL-VIACNTATTAALPYLQSMLPDMPILGVVIPGASAAVAATKNQRVAVLATETT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + LI + Q I + +L + EE +I + +K ++G E Sbjct: 124 IASKAYQELIARQLPQAVISTRACSVLVALAEEGMINNQIAREALKHYLDGFNDE----- 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +L CTH+P+ + L P + +D++ + A LL + N Sbjct: 179 -DTFLLGCTHFPVFKSLLVDLLPEGIAVVDSAHATANSLYSLLQKQN 224 >gi|312958853|ref|ZP_07773372.1| Glutamate racemase [Pseudomonas fluorescens WH6] gi|311286623|gb|EFQ65185.1| Glutamate racemase [Pseudomonas fluorescens WH6] Length = 264 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 5/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL +++ L+P +YVAD PYG + +R + +K Sbjct: 7 IGVFDSGVGGVSVLDEIQRLLPHESLLYVADGGHIPYGEKTPAFILERSRRVAEFFREKG 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA +LR FP +G PA+K AAA T++G++ +L+T TL+ Sbjct: 67 AKAF-VIACNTATVAAVADLRQDFPDWPLVGMEPAVKPAAAATRAGVVGVLATTGTLQSA 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + + + L +E + ++ ++G D I Sbjct: 126 KFAALLDRFATDVRVITQPCPGLVELIETG----DLTSPALRTLLQGYIDPLLSAGCDTI 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +L CTHYP + + Q+ P + +D ++AR+ + LL Sbjct: 182 ILGCTHYPFLKPLLAQMLPSSITLIDTGAAVARQLKRLL 220 >gi|291612568|ref|YP_003522725.1| glutamate racemase [Sideroxydans lithotrophicus ES-1] gi|291582680|gb|ADE10338.1| glutamate racemase [Sideroxydans lithotrophicus ES-1] Length = 268 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 77/254 (30%), Positives = 118/254 (46%), Gaps = 16/254 (6%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I +FDSG+GGL VLQ +R +P IYVAD PYG+ ++ R + + ++ Sbjct: 5 GAIGVFDSGVGGLSVLQHIRHTLPHERLIYVADSGHVPYGDKSPAFIEARALAITRFLIS 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + VIACNTA LR F M L PA+K A A TQS ++ +L+T TL Sbjct: 65 QGAEAI-VIACNTATAAAAHTLRVKFNKMPILAMEPAVKPAIAVTQSRVVGVLATVGTLE 123 Query: 134 RTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+ Y + I L +VE ++ ++ +E K Sbjct: 124 SARFAALLEKYGGWKVKIETQGCPGLVEQVERG----ELHSARTRELVERYTAPLLRKGA 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR----RARC-LLPRINTHQTRVFDD 247 D ++L CTHYP + + R++ + +D ++AR R + L PRI + F Sbjct: 180 DTLILGCTHYPFLAPLIREIVGDNITLIDTGAAVARHLQHRVKAELPPRIVGEASERF-- 237 Query: 248 HALFLSGKPDIAMR 261 F SG P+ A R Sbjct: 238 ---FTSGDPEQASR 248 >gi|114331729|ref|YP_747951.1| glutamate racemase [Nitrosomonas eutropha C91] gi|114308743|gb|ABI59986.1| glutamate racemase [Nitrosomonas eutropha C91] Length = 268 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 9/232 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSGIGGL V +K+R L+P +YVAD + PYG D+ + +R M ++ L + Sbjct: 14 IFDSGIGGLSVARKIRELLPSEDMVYVADSLHAPYGEKSDNYIFQR-MGAVTEFLLARKA 72 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ACNTA T LR+ +P + +G P IK AA T +G+I +L+TP TL+ Sbjct: 73 KAVVVACNTATTAAISRLRACYP-IPIVGVEPGIKPAALSTHTGVIGVLATPRTLQTNSF 131 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L + I + L +++E + D+ ++ K D IVL Sbjct: 132 TALAERFARNVRIEIQPCPDLVTKIE----ALNFNSDQTIALLKQYISPLLDKGADTIVL 187 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 CTHY + + +++ + + ++A+ + R+++ DHA Sbjct: 188 GCTHYNHLSELISKVAGENISIIKTDAAVAKE---VARRLSSGGLLAGGDHA 236 >gi|299529106|ref|ZP_07042554.1| glutamate racemase [Comamonas testosteroni S44] gi|298722862|gb|EFI63771.1| glutamate racemase [Comamonas testosteroni S44] Length = 284 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 13/227 (5%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA-LKKRLMFLFSDILDKYQPVLSV 81 +GGL VLQ +R +P F+Y+AD PYG+ A +++R + + +L+++ + V Sbjct: 1 MGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAIAKYLLEQHDIKILV 60 Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 IACNTA + LR P + +G PAIK A+ +Q+ + +++T T+ + L+ Sbjct: 61 IACNTATAAAVELLRERLPQLPVIGVEPAIKPASFSSQTHHVGVMATRGTISSQRVARLV 120 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------GCFIEKEGKR 191 + + HL + LA +E+ + + ED EI G F K G+ Sbjct: 121 SEHGQRAEFHLQACDGLARAIEQ-STEQALPEDASATEIRALCAKYTSALGSFGLKTGQ- 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTHY + R L + LD +AR+ R +L + N Sbjct: 179 MDTLVLGCTHYVFVKDDLRALLGPDIQLLDTGAPVARQTRRMLEQRN 225 >gi|147677257|ref|YP_001211472.1| glutamate racemase [Pelotomaculum thermopropionicum SI] gi|146273354|dbj|BAF59103.1| glutamate racemase [Pelotomaculum thermopropionicum SI] Length = 265 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/246 (29%), Positives = 114/246 (46%), Gaps = 7/246 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I FDSG+GGL V+++ R L+P FIY AD PYG+ L+KR F D L Sbjct: 5 GPIGFFDSGVGGLSVMKEARALLPSEDFIYFADSAYCPYGDKPPEVLRKR-AFAICDFLL 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNT D++R + S+ +G PA+K A + T++G I +L+T TL Sbjct: 64 ERGTRLIVIACNTISIAALDDVRR-YVSVPVVGIEPAVKPAVSATRNGKIGVLATGVTLA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ Y ++ L VE + E + +E + D Sbjct: 123 GERFNALVRRYGRGIEVYTQPCPGLVELVESG----NWERPEAEIMLERYLGPLLARGVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFL 252 +VL CTHYP + + +L+ V +D ++AR+ + +L + F Sbjct: 179 TVVLGCTHYPFLRPLVEKLAGGGVTVIDTGRAVARQIKNVLEASGLASGKTAPGTERFFT 238 Query: 253 SGKPDI 258 S +P++ Sbjct: 239 SARPEV 244 >gi|90961813|ref|YP_535729.1| glutamate racemase [Lactobacillus salivarius UCC118] gi|90821007|gb|ABD99646.1| Glutamate racemase [Lactobacillus salivarius UCC118] Length = 256 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 7/223 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K L F + L Y Sbjct: 9 IGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQK-LSFEKVEHLLSY 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP TL+ Sbjct: 68 NCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPLTLKEK 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 ++L++ YV++ I + + L +E + E++ + K +D I Sbjct: 128 KFNDLMNKYVTEADIRKIPAPDLVEFIESG----DVDSPELETYLRNLL--SPYKDSDSI 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 VL CTH+P V +++ +D + AR + LL + N Sbjct: 182 VLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSN 224 >gi|150026137|ref|YP_001296963.1| glutamate racemase [Flavobacterium psychrophilum JIP02/86] gi|149772678|emb|CAL44161.1| Glutamate racemase [Flavobacterium psychrophilum JIP02/86] Length = 259 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 8/255 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I +FDSGIGG + +++ L+P + IY+AD PYG + + L F D L Sbjct: 4 NNPIGLFDSGIGGTSIWKEIHQLLPNENTIYLADSKNAPYGKKSKQEIIE-LCFKNIDYL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNTA T ++R + + +G PAIK AA TQ+ I IL+T T+ Sbjct: 63 VSQNCKMIVVACNTATTNAIIQIREKY-KIPIIGIEPAIKPAANKTQTQTIGILATKGTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + SY +I ++ I VE G +I+ E+ K + Sbjct: 122 NSELFNKQVESYT---NIKIIE-QIGYGLVELIENG-EIESPEMTKLLTSYLEPMIKANI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL C+HYP +V +++ P + +D+ ++AR+ + +L + N T + +F Sbjct: 177 DYLVLGCSHYPYLVPAIKKIIPENIKIIDSGQAVARQTKTILEKNNLLNTTTKNSQQIFY 236 Query: 253 SGKPDIAMRRLMQGF 267 + ++ ++ GF Sbjct: 237 ANSNPTVLKNIL-GF 250 >gi|305664609|ref|YP_003860896.1| glutamate racemase [Maribacter sp. HTCC2170] gi|88708626|gb|EAR00862.1| glutamate racemase [Maribacter sp. HTCC2170] Length = 262 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 118/228 (51%), Gaps = 20/228 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG + +++ +P + +Y AD PYG + +L +++L Sbjct: 6 IGIFDSGVGGTSIWKEINVQLPNENTVYFADSENAPYGEKSSEEII-QLSVKNTELLLGK 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA T D LR + + F+G PAIK AA ++S + +L+T TL Sbjct: 65 GCKLIVVACNTATTNAIDHLRKNY-DVPFIGIEPAIKPAALQSKSKTVGVLATKGTL--- 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIK-KEIEGCFIEKEG--- 189 TS+L HS S+ H + ++ +E+ G+ I+E +I KE G Sbjct: 121 -TSSLFHS-TSENHTNGIT------VIEQVGKGLVPLIEEGKINSKETRELLFSYIGPML 172 Query: 190 -KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 K D +VL CTHYP ++ V L P V +D+ +++AR+AR +L + Sbjct: 173 EKGIDYLVLGCTHYPYLIPVLNDLIPDHVKIIDSGEAVARQARAVLEQ 220 >gi|87118931|ref|ZP_01074829.1| Glutamate racemase [Marinomonas sp. MED121] gi|86165322|gb|EAQ66589.1| Glutamate racemase [Marinomonas sp. MED121] Length = 290 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 120/232 (51%), Gaps = 14/232 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I I DSG GGL VL + Y + Y ADD PYG+ +++R++ + ++DK Sbjct: 14 IGILDSGAGGLTVLAALIKSNKAYDYYYFADDAFAPYGSLSIDKIQQRVLSICDFLIDKG 73 Query: 76 QPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L VIACNTA L++ + ++ +G PAIK A+ G++ +L+TP T Sbjct: 74 VTSL-VIACNTATLEVIHLVRSCPKVIEKNILIVGIEPAIKPASLLDYQGVVCVLATPIT 132 Query: 132 LRRTYTSNLIH----SYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 + LI+ + VSQ H ++S +LA+ ++ G + D + I E Sbjct: 133 CQSNRLQALINHASLNRVSQSSRYHCIASEVLANAIDALP-GSGSRVDLELQRIRAIMAE 191 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + + ++VLACTHYPLI +F L +PV L+ SD++ARR LP ++ Sbjct: 192 LDSR---ILVLACTHYPLIKSMFEGLFDYPVQILEPSDAVARRVIDCLPSMH 240 >gi|325123931|gb|ADY83454.1| putative glutamate racemase [Acinetobacter calcoaceticus PHEA-2] Length = 266 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 5/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNT + + +R+ ++ + PA+K A A TQ+ I++L+T T+ Sbjct: 65 AQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQTKHIAVLATATTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +LI +Y + LV + LA ++E K E+K +E ++ Sbjct: 124 KGKNLKSLIETYAQHIKVSLVPCIGLAEKIETG----KAHTVEVKDYLENILAPLVEQKV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D I+L CTHYP + + +++ + ++ S+++ + Sbjct: 180 DTIILGCTHYPFVSDMIQEIVGRDIQIIEPSEAVTAQ 216 >gi|237747808|ref|ZP_04578288.1| glutamate racemase [Oxalobacter formigenes OXCC13] gi|229379170|gb|EEO29261.1| glutamate racemase [Oxalobacter formigenes OXCC13] Length = 283 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 15/232 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I IFDSG+GGL VL+ + +P+ +Y AD PYG+ + + +R FL +D Sbjct: 13 KASGPIGIFDSGVGGLSVLRHIATQLPDEELVYFADSGYAPYGDKPEEFVVER-SFLITD 71 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L K V+ACNTA + LR +P + +G P +K AAA T +G + +++T Sbjct: 72 FLLKQDIKALVVACNTATAMAIHLLREKYPDLPIVGVEPGLKPAAAKTITGTVGVMAT-- 129 Query: 131 TLRRTYTSN---LIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 RT SN ++H ++ Q +H + M + + + ++ + I + ++ + Sbjct: 130 --ERTLASNKFHVLHQLLNDQTGVHFI--MQACNGMADLIEHAELDSEPIFELVQRYLLP 185 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSP----WPVDWLDNSDSIARRARCLL 234 ++ D IVL CTHYP + HV +++ ++ +D ++AR+ + LL Sbjct: 186 LLEQKADTIVLGCTHYPFVRHVIEKVAADYGSTQLNIIDTGYAVARQLKHLL 237 >gi|184159912|ref|YP_001848251.1| glutamate racemase [Acinetobacter baumannii ACICU] gi|183211506|gb|ACC58904.1| Glutamate racemase [Acinetobacter baumannii ACICU] gi|322509829|gb|ADX05283.1| Glutamate racemase [Acinetobacter baumannii 1656-2] Length = 266 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 16/267 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T T+ Sbjct: 65 AQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +LI +Y + LV + LA ++E K E+K ++ ++ Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH----QTRVFDDH 248 D I+L CTHYP + +++ + ++ S+++ + L+ ++N + ++ +H Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ---LIRQLNQYHLSSESPNEGNH 236 Query: 249 ALFLSGKP----DIAMRRLMQGFGLKS 271 ++ S P D+ L + +K+ Sbjct: 237 IIWTSSDPLEVADVTFSLLSEKLSVKA 263 >gi|257456303|ref|ZP_05621500.1| glutamate racemase [Treponema vincentii ATCC 35580] gi|257446389|gb|EEV21435.1| glutamate racemase [Treponema vincentii ATCC 35580] Length = 255 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 6/249 (2%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSGIGGL + P+ YVAD FPYG + + + + I+++ P Sbjct: 1 MDSGIGGLPYFRYFHQKAPQAPAAYVADLEHFPYGEKTRDEVIRFAVGVTEKIINRLNPE 60 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 + ++ CNT T D LR TF S+ F+G VPA+K AA + + I I++T T+ Y Sbjct: 61 MIIVVCNTMSTAALDALRKTF-SIPFVGTVPAVKVAAEVSVNKRIGIIATARTINDPYLD 119 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 LI S+ + C I + L +++E I ++E +K + + + TD +VLA Sbjct: 120 KLIESFAADCTIERRADAELVAKIENGL--ITAPDEEKRKAVMPAIRQFKAAGTDTLVLA 177 Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258 CTH+ + F + + + +D+ + A +LP T + +++G+ Sbjct: 178 CTHFLHLADTFAECAAPEIKVVDSLPGVVSHALDVLPPPAGGNT---SRSSCYVTGEITE 234 Query: 259 AMRRLMQGF 267 + RL +G+ Sbjct: 235 RIDRLYRGY 243 >gi|77460966|ref|YP_350473.1| glutamate racemase [Pseudomonas fluorescens Pf0-1] gi|77384969|gb|ABA76482.1| putative glutamate racemase [Pseudomonas fluorescens Pf0-1] Length = 263 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 5/222 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL +++ L+P +Y+ D PYG +++R + Sbjct: 3 EAPIAVFDSGVGGLSVLAEIQQLLPNESLLYLGDCGHIPYGEKTPEFIRQRCSVMAGFFR 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L VIACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL Sbjct: 63 EQGAKAL-VIACNTATVAGVADLRRDFPEWPIVGMEPAVKPAAAATRSGVVGVLATTGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +++ ++ Sbjct: 122 QSAKFAALLDRFATDVRVITQPCPGLVELIESG----DLHSPQLRALLKHYVDPLLANGC 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D I+L CTHYP + + + + P + +D ++AR+ + LL Sbjct: 178 DTIILGCTHYPFLKPMLKSMIPESISLIDTGAAVARQLQRLL 219 >gi|11386951|sp|Q9RU10|MURI_DEIRA RecName: Full=Glutamate racemase Length = 290 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 4/221 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL +++ +P+ +Y+AD PYG D ++ ++++ + Sbjct: 20 IGVFDSGAGGLSVLAELQRALPQEDVLYLADTAHVPYGARSDEDIRDLTARAVAELVRRG 79 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA LR F + +G VPA+K A A T+SG++ +L+TP TLR T Sbjct: 80 VKAV-VVACNTASAFSLTHLRERF-ELPIIGLVPAVKPAVAATKSGVVGVLATPGTLRGT 137 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +++I + + ++ ++ ++ + K E + + D + Sbjct: 138 LLADVIRQWAEPAGVRVMQAV--STELVPLVEAGKADSPEARVVLRDVLEPLAEAGADQL 195 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 VL CTHYP + R +D+ ++AR R +L R Sbjct: 196 VLGCTHYPFLAGSIRAEFGDTFALVDSGAAVARHTRNVLSR 236 >gi|30248466|ref|NP_840536.1| aspartate and glutamate racemase:glutamate racemase [Nitrosomonas europaea ATCC 19718] gi|30138352|emb|CAD84360.1| Aspartate and glutamate racemases:Glutamate racemase [Nitrosomonas europaea ATCC 19718] Length = 271 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 6/212 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL V + R L+P F+YVAD PYG+ E + +R+ + +++ Sbjct: 8 IFDSGVGGLAVYRAARKLLPHQAFVYVADSGFAPYGSRESAYIIRRVTEIADALVNNGAK 67 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA LR+ + S+ +G PAIK AAA +++G I +L+T T Sbjct: 68 AL-VVACNTATVTTVTALRAKY-SLPIIGIEPAIKPAAAISRNGRIVVLTTRRTAESEAV 125 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L Y + I L LA +VE I +E+K+ + DV+VL Sbjct: 126 AQLCVRYGTHVQIMLQPCPGLADQVEAG----NIDGEEVKEMLRQYLAPAVSLANDVVVL 181 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 CTH+ + + L+ V ++ S+++AR+ Sbjct: 182 GCTHFTFLADQIQNLAGPQVTIIEPSEAVARQ 213 >gi|213855738|ref|ZP_03383978.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 118 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/119 (42%), Positives = 79/119 (66%), Gaps = 1/119 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKR 118 >gi|301597891|ref|ZP_07242899.1| glutamate racemase [Acinetobacter baumannii AB059] Length = 197 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 5/193 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T T+ Sbjct: 65 TQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +LI +Y + LV + LA ++E K E+K +E ++ Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAYTAEVKDYLENILAPLVEQKV 179 Query: 193 DVIVLACTHYPLI 205 D I+L CTHYP + Sbjct: 180 DTIILGCTHYPFV 192 >gi|319763448|ref|YP_004127385.1| glutamate racemase [Alicycliphilus denitrificans BC] gi|330824305|ref|YP_004387608.1| glutamate racemase [Alicycliphilus denitrificans K601] gi|317118009|gb|ADV00498.1| glutamate racemase [Alicycliphilus denitrificans BC] gi|329309677|gb|AEB84092.1| glutamate racemase [Alicycliphilus denitrificans K601] Length = 287 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 13/230 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ + A ++ + L Sbjct: 10 IGVFDSGIGGLSVLQALRHELPHEDFVYLADSGNAPYGDAKGEAFVQQRTLAIARWLRAQ 69 Query: 76 QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + + V+ACNTA + LR+T P + +G PA+K AAA +Q+ + +L+T T+ Sbjct: 70 HGIKALVVACNTATAAAVERLRATLPDLPAIGVEPALKPAAARSQTHHVGVLATRGTVSS 129 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------GCF 184 + L + ++ + + LA +E+ + + E +I G F Sbjct: 130 ARFARLHDEHGARTRFAVQACDGLARAIEQ-STEEPLPATESATKIRALCARYTGALGRF 188 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 K G D +VL CTHY R L V LD ++AR+ R +L Sbjct: 189 GLKTGD-IDTLVLGCTHYVFAKDALRDLVGPDVQILDTGAAVARQTRRIL 237 >gi|229588286|ref|YP_002870405.1| glutamate racemase [Pseudomonas fluorescens SBW25] gi|229360152|emb|CAY47009.1| putative peptidoglycan biosynthesis protein [Pseudomonas fluorescens SBW25] Length = 264 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 21/227 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL---KKRLMFLFSDIL 72 I +FDSG+GGL VL +++ L+P +YVAD PYG + +R+ F + Sbjct: 7 IGVFDSGVGGLTVLDEIQQLLPHESLLYVADCGHIPYGEKSPAFILERSRRVAAFFREQG 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL Sbjct: 67 AKA----FVIACNTATVAAVADLRLDFPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE-----GCFIEK 187 + + L+ + + + L +E +++ IE GC Sbjct: 123 QSAKFAALLDRFATDVKVVTQPCPGLVELIESGDLNSPALRQLLQRYIEPLLSAGC---- 178 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D I+L CTHYP + + Q+ P + +D ++AR+ + LL Sbjct: 179 -----DTIILGCTHYPFLKPLLAQMLPPSIILIDTGAAVARQLKRLL 220 >gi|293610501|ref|ZP_06692801.1| predicted protein [Acinetobacter sp. SH024] gi|292826845|gb|EFF85210.1| predicted protein [Acinetobacter sp. SH024] Length = 266 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 5/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLI 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNT + + +R+ ++ + PA+K A A TQS I++L+T T+ Sbjct: 65 NDGNCKAIVVACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +LI +Y + LV + LA ++E K E+K ++ ++ Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D I+L CTHYP + +++ + ++ S+++ + Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216 >gi|159900727|ref|YP_001546974.1| glutamate racemase [Herpetosiphon aurantiacus ATCC 23779] gi|229486239|sp|A9AXC6|MURI_HERA2 RecName: Full=Glutamate racemase gi|159893766|gb|ABX06846.1| glutamate racemase [Herpetosiphon aurantiacus ATCC 23779] Length = 254 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 12/222 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLMFLFSDIL 72 I +FDSG+GGL L+ +R L+P IY AD PYG E AL +R+ + IL Sbjct: 6 IGMFDSGVGGLSTLRDLRALLPHEDIIYYADTGNCPYGGRSHEEIVALSERITY----IL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA D LR F S++F+G P IK A A T++G++ +++T AT+ Sbjct: 62 LERGVKLIVVACNTATLHAVDYLREHF-SISFVGMEPGIKPAIAQTKTGVVGVMATQATV 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 LI Y + + L +E + D + + + K G Sbjct: 121 AGERFQRLIARYAGDVQVVPQACPGLVELIEAGELQSETTRDAVARYVAPLL--KAG--A 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D IVL CTHYP + + ++ V LD ++AR+ + LL Sbjct: 177 DTIVLGCTHYPFLRSLIADVAGPNVALLDTGAAVARQTQRLL 218 >gi|110637498|ref|YP_677705.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406] gi|110280179|gb|ABG58365.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406] Length = 266 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 6/223 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I IFDSG+GGL +L K+ +P F Y D PYG +++ + + + Sbjct: 1 MHQPIGIFDSGVGGLTLLDKLVHALPAESFEYYGDSGNCPYGTKTIEEIRQHTIRIMDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + K+ ++ ++ACNT T I D+LRS +P M +G P K A A + + I IL+T T Sbjct: 61 MQKHCKMI-IVACNTITTNIIDQLRSIYP-MPIVGMEPGTKPAYASSANKRIGILATAGT 118 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + S+ + S I A VE I I++ + +++E Sbjct: 119 INGQLYNRTLESFNDKA---FFISQIGAGLVELIEQNI-IEQARMMQQLEPLLKPMIDAH 174 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHY + +V + P+P++ +D D++ R+ + +L Sbjct: 175 IDTLVLGCTHYNYLTNVLAGMFPYPIEIIDTRDAVTRQVQRIL 217 >gi|167572233|ref|ZP_02365107.1| glutamate racemase [Burkholderia oklahomensis C6786] Length = 290 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 6/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + + + Sbjct: 18 IGIFDSGLGGLSVLRAVRARLPDEALVYVADSRHAPYGPRDDAFIVERTLAIGEWLAAQG 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRSA 135 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI + C + L VE G E++ + G D + Sbjct: 136 RFEALIARHADDCRFICQAGHGLVEAVERGDTG----SPELRALLTGYLEPMLAAGADTL 191 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VL CTHYP + R ++ + +D SD+IAR+ Sbjct: 192 VLGCTHYPFLDAAIRDVASDRLHLIDTSDAIARQ 225 >gi|241763139|ref|ZP_04761199.1| glutamate racemase [Acidovorax delafieldii 2AN] gi|241367764|gb|EER62018.1| glutamate racemase [Acidovorax delafieldii 2AN] Length = 284 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 101/233 (43%), Gaps = 10/233 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + +SI +FDSG+GGL VL+ + +P F+Y+AD PYG D + +R + Sbjct: 3 QASSSIGVFDSGVGGLSVLRALIAALPHERFVYLADSGNAPYGERGDAFVARRTHAITDY 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + +Y V+ACNTA E+RS P + +G PA+K A T +G I +L T Sbjct: 63 LQSQYDIKALVVACNTATAAAIHEVRSAHPELPLVGVEPALKPAVGLTHTGRIGVLGTRG 122 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIE------ 181 TL L S Q + LA +E + G E E Sbjct: 123 TLTSAKFGRLQASLAGQAEFVVQPCDGLAHAIERSVGWPSGPNAPGTETFALCEKYLASM 182 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 F G D +VL CTHY + R L V ++ + +AR+ R LL Sbjct: 183 KPFGSAPGS-IDTLVLGCTHYVFVEEALRSLVGPQVQMIETGEPVARQTRRLL 234 >gi|148546010|ref|YP_001266112.1| glutamate racemase [Pseudomonas putida F1] gi|166231050|sp|A5VYG8|MURI_PSEP1 RecName: Full=Glutamate racemase gi|148510068|gb|ABQ76928.1| glutamate racemase [Pseudomonas putida F1] Length = 265 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 5/217 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL VL +++ L+P +YVAD PYG +++R + ++ + Sbjct: 10 VMDSGVGGLSVLAEIQRLLPNETLLYVADCGHIPYGEKSPDYIRERCRHI-AEFFHEQGA 68 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL+ Sbjct: 69 KAMVLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSAKF 128 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + + + L +E + +++ ++G D ++L Sbjct: 129 AALLDRFANDVQVITQPCPGLVELIETG----DLASPALRQMLQGYVQPLLAAGCDTLIL 184 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 CTHYP + + + P V +D ++AR+ R LL Sbjct: 185 GCTHYPFLRPLLAGMVPNDVAIIDTGAAVARQLRRLL 221 >gi|94986184|ref|YP_605548.1| glutamate racemase [Deinococcus geothermalis DSM 11300] gi|94556465|gb|ABF46379.1| Glutamate racemase [Deinococcus geothermalis DSM 11300] Length = 271 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 20/256 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL ++R +P F+Y+AD P G D ++ D+ ++ Sbjct: 9 VFDSGVGGLSVLAQLRRHLPHEDFLYLADTAHVPIGARPDDEIR--------DLTERAVA 60 Query: 78 VLS-------VIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L V+ACNTA LR + PS +G VPA+K A A T+SG++ +L+TP Sbjct: 61 ALHARGAKGVVVACNTASAFSLTPLRERYGPSFPIIGLVPAVKPAVAATRSGVVGVLATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TLR T ++I + + ++++ + A V G + + + + Sbjct: 121 GTLRGTLLRDVIRKWADPAGVRVLTA-VSAELVPLVEAG-QASSERARAVLRETLTPLAQ 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D +VL CTHYP + R+ +D+ ++AR +L + HA Sbjct: 179 AGADQLVLGCTHYPFLAESIRREFGDTFALVDSGAAVARHTGNVLAGAGLLREAGRPGHA 238 Query: 250 LFL-SGKPDIAMRRLM 264 +L +G P+ A R +M Sbjct: 239 TYLVTGNPE-ASRPVM 253 >gi|167838899|ref|ZP_02465676.1| glutamate racemase [Burkholderia thailandensis MSMB43] Length = 290 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 6/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GGL VL+ +R +P +YVAD + PYG +D + +R + + ++ Sbjct: 15 RTPIGIFDSGLGGLSVLRAVREQLPGEAIVYVADSLHAPYGPRDDAFIIERTLAIGEWLV 74 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL Sbjct: 75 AQGAKAL-VVACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R LI Y + C + L +E G E++ + G Sbjct: 133 RSARFEALIARYAADCRFIRQAGHGLVEAIERGDTG----SPELRALLAGYLEPMLEAGA 188 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D +VL CTHYP + R ++ + +D D+IAR+ Sbjct: 189 DTLVLGCTHYPFLDAAIRDVTSNCLHLIDTGDAIARQ 225 >gi|15806594|ref|NP_295309.1| glutamate racemase [Deinococcus radiodurans R1] gi|6459350|gb|AAF11147.1|AE002002_5 glutamate racemase [Deinococcus radiodurans R1] Length = 369 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 8/223 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL +++ +P+ +Y+AD PYG D ++ ++++ + Sbjct: 99 IGVFDSGAGGLSVLAELQRALPQEDVLYLADTAHVPYGARSDEDIRDLTARAVAELVRRG 158 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA LR F + +G VPA+K A A T+SG++ +L+TP TLR T Sbjct: 159 VKAV-VVACNTASAFSLTHLRERF-ELPIIGLVPAVKPAVAATKSGVVGVLATPGTLRGT 216 Query: 136 YTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +++I + + ++ S L VE K E + + D Sbjct: 217 LLADVIRQWAEPAGVRVMQAVSTELVPLVEAG----KADSPEARVVLRDVLEPLAEAGAD 272 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 +VL CTHYP + R +D+ ++AR R +L R Sbjct: 273 QLVLGCTHYPFLAGSIRAEFGDTFALVDSGAAVARHTRNVLSR 315 >gi|256827100|ref|YP_003151059.1| glutamate racemase [Cryptobacterium curtum DSM 15641] gi|256583243|gb|ACU94377.1| glutamate racemase [Cryptobacterium curtum DSM 15641] Length = 264 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 10/229 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GG+ VL+ + +P +F+Y D PYG+ ++ + +L + Sbjct: 12 VFDSGVGGISVLRNLVRELPAENFLYYGDSAHAPYGDKTIVEVRSLSANIVETMLARGVK 71 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNTA + + LR +P + +G PA+K AA Q I +++T TL+ Sbjct: 72 AI-VIACNTATSAAAEHLRECYPGLPIIGMEPALKPAAINPQHQNILVMATTVTLKLDKF 130 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L H++ SQ HI + LA VE + D I+ + G+ D +VL Sbjct: 131 QQLAHTWGSQSHIIALPCPGLADLVETG----DLDSDAIRSYLAEKLAPYRGQ-VDSVVL 185 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR----INTHQT 242 CTHYP + Q+ V D AR+ R LL +NT QT Sbjct: 186 GCTHYPFLKRQIHQVLGAEVPLFDGGAGCARQTRRLLSETHLLVNTPQT 234 >gi|260557842|ref|ZP_05830055.1| glutamate racemase [Acinetobacter baumannii ATCC 19606] gi|260408633|gb|EEX01938.1| glutamate racemase [Acinetobacter baumannii ATCC 19606] Length = 266 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 16/267 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T T+ Sbjct: 65 AQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +LI Y + LV + LA ++E K E+K ++ ++ Sbjct: 124 KGKNLKSLIEMYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH----QTRVFDDH 248 D I+L CTHYP + +++ + ++ S+++ + L+ ++N + ++ +H Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ---LIRQLNQYHLSSESPNEGNH 236 Query: 249 ALFLSGKP----DIAMRRLMQGFGLKS 271 ++ S P D+ L + +K+ Sbjct: 237 IIWTSSDPLEVADVTFSLLSEKLSVKA 263 >gi|167461654|ref|ZP_02326743.1| glutamate racemase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322384236|ref|ZP_08057946.1| glutamate racemase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151128|gb|EFX44445.1| glutamate racemase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 268 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 16/251 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-- 69 +Q +I I DSG+GGL V++++ +P+ IY D PYG +K LF+ Sbjct: 1 MQQAIAILDSGVGGLTVVKEVMRQLPQEQIIYFGDSARSPYGPRPADEVK-----LFTRQ 55 Query: 70 --DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 D L ++ P + VIACNTA + +E+R ++ +G + P + A ++G I ++ Sbjct: 56 VVDYLIEFHPKMIVIACNTATAVALEEIRQRV-AIPVVGVISPGARAAIKMARTGSIGVI 114 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+R + + +H S +LA VE+ GI +E + +E + Sbjct: 115 GTDGTIRSGAYEETLKTISPTIQVHSQSCPLLAPMVEK---GI-FNGEEALQVVESSLLP 170 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF- 245 K D ++L CTHYP + V ++ V +++++ AR +L N T F Sbjct: 171 LLDKSMDCLILGCTHYPYLADVIGKVMGPEVCLINSAEETAREVSTILQHQNQLATGKFR 230 Query: 246 DDHALFLSGKP 256 +H F SG P Sbjct: 231 PEHRFFCSGDP 241 >gi|163786500|ref|ZP_02180948.1| glutamate racemase [Flavobacteriales bacterium ALC-1] gi|159878360|gb|EDP72416.1| glutamate racemase [Flavobacteriales bacterium ALC-1] Length = 261 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 119/226 (52%), Gaps = 20/226 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGG + +++ L+P + IY+AD PYGN + + +L +++L Sbjct: 8 IGIFDSGIGGTSIFKEIIALLPNENCIYLADSKNAPYGNKSEADIL-QLSIKNTELLISK 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA T LR+ + ++F+G PAIK AA TQS I IL+T TL Sbjct: 67 GCKLIVVACNTATTNAISYLRANY-DVSFIGIEPAIKPAALNTQSKSIGILATKGTL--- 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-------IKEDEIKKEIEGCFIEKE 188 +S+L H L + I +E+ GI ++ DE+KK +E Sbjct: 123 -SSHLFHKTTD-----LYTDGI--KVIEQVGEGIVPLIETGLLESDEMKKLLETYLEPML 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + D +VL CTHYP ++ + +++ P V +D+ ++A++ + +L Sbjct: 175 KQNIDYLVLGCTHYPYLIPMLKKMLPEHVKIIDSGLAVAKQTQAVL 220 >gi|167036404|ref|YP_001671635.1| glutamate racemase [Pseudomonas putida GB-1] gi|166862892|gb|ABZ01300.1| Glutamate racemase [Pseudomonas putida GB-1] Length = 296 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 1/214 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I++ DSG+GGL + +++ L+PE +YV D+ FPYG+ + +R+ L + + Sbjct: 34 IVVLDSGVGGLTLSRQLELLLPEASILYVVDNEWFPYGSKSGAEISQRVQHLIDQLYTQI 93 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P+ V+ACNTA +KD + FL P +++A + I +L+TP T++ Sbjct: 94 RPLAIVVACNTASVAMKDYGLDSCVQHCFL-ITPPLEEAVEISDQKNIVLLATPGTVKSR 152 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y + ++ +I +++ L + E G K ++ K+ D + Sbjct: 153 YIRRAMAITRNRANIWPIAAQPLVALSEARLAGQVASFASFTKLVDDHLTTKQRFSIDTV 212 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +L CTH+P ++ + P +WLD + +A R Sbjct: 213 ILGCTHFPHVIKDLEGIFPSVQNWLDPAKKVALR 246 >gi|288940398|ref|YP_003442638.1| glutamate racemase [Allochromatium vinosum DSM 180] gi|288895770|gb|ADC61606.1| glutamate racemase [Allochromatium vinosum DSM 180] Length = 282 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 6/252 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+++R L+P +YVAD PYG+ ++ R + + +L Sbjct: 4 HHPIGVFDSGLGGLTVLREIRRLLPGEDLLYVADSAHAPYGDKSMAFIESRSIAITEFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + V+ACNTA LR+ + ++ + PA+K A T+SG++++L+T TL Sbjct: 64 ERGAKAI-VVACNTATGAAAKLLRTQY-NVPLIAMEPAVKPAVERTRSGVVAVLATRRTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 S L+ + I L L RVE + + ++ +E + Sbjct: 122 ASHNFSVLLGRLETDAEILLQPCPGLVERVEAGDLAGEGTRELLRGYLEPLL----ARGA 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYPL+ + ++L+ V LD+ +AR+ R L F Sbjct: 178 DTLVLGCTHYPLLTPLIQELAGPDVLILDSGIGVARQVRRRLSEAELLAPEERTGRERFW 237 Query: 253 SGKPDIAMRRLM 264 + P M LM Sbjct: 238 TSAPPARMHALM 249 >gi|53804366|ref|YP_113738.1| glutamate racemase [Methylococcus capsulatus str. Bath] gi|81682254|sp|Q609F9|MURI_METCA RecName: Full=Glutamate racemase gi|53758127|gb|AAU92418.1| glutamate racemase [Methylococcus capsulatus str. Bath] Length = 271 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 7/252 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I +FDSG+GGL VL+++R ++P + +YVAD PYGN +++R + + +L Sbjct: 5 EHPIGVFDSGVGGLSVLREIRAVLPHENLLYVADSGHLPYGNKPAEYIEQRALTVGRFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNTA +R+ F + +G P +K A A ++S ++ +L+T TL Sbjct: 65 SRGAKAI-VVACNTATAAAITVMRAEF-RVPVIGMEPGLKPAVALSKSLVVGVLATEGTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +L+ + + + +VE G D +++ E + Sbjct: 123 KSAKFRDLVGRTTEKVEVIAQACPGWVEQVERGDLGSPATRDLVRRYTEPALE----RGA 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP + + ++ V ++ ++AR R L R+ LF Sbjct: 179 DTLVLGCTHYPFLAGLIADVAGPDVHIVETGSAVARHLRRRLEADGLLTRRMAPGVELFW 238 Query: 253 SGKP-DIAMRRL 263 S P ++A R L Sbjct: 239 SSGPAEVAGRSL 250 >gi|332873348|ref|ZP_08441302.1| glutamate racemase [Acinetobacter baumannii 6014059] gi|323519838|gb|ADX94219.1| glutamate racemase [Acinetobacter baumannii TCDC-AB0715] gi|332738411|gb|EGJ69284.1| glutamate racemase [Acinetobacter baumannii 6014059] Length = 266 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 16/264 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ + Sbjct: 8 IGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLISNLVAQG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T T++ Sbjct: 68 KCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATATTVKGK 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +LI +Y + LV + LA ++E K E+K ++ ++ D I Sbjct: 127 NLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKVDTI 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN----THQTRVFDDHALF 251 +L CTHYP + +++ + ++ S+++ + L+ ++N + ++ +H ++ Sbjct: 183 ILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ---LIRQLNQYHLSSESPNEGNHIIW 239 Query: 252 LSGKP----DIAMRRLMQGFGLKS 271 S P D+ L + +K+ Sbjct: 240 TSSDPLEVADVTFSLLSEKLSVKA 263 >gi|330811716|ref|YP_004356178.1| glutamate racemase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379824|gb|AEA71174.1| Glutamate racemase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 263 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 5/222 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL VL ++R L+P +YVAD PYG +++R + +L Sbjct: 3 EAPIGVLDSGVGGLSVLGEIRQLLPNESLLYVADCGHIPYGEKTPEYIRQRCSIIADFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL Sbjct: 63 GQGAKAL-VVACNTATVAAVADLRRDFPHWPIVGMEPAVKPAAAATRSGIVGVLATTGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + + + ++ Sbjct: 122 QSAKFAALLDRFATDVRVITQPCPGLVELIETG----DLHSPALYQLLQHYVDPLLAAGC 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYP + + ++ P + +D ++AR+ + LL Sbjct: 178 DTLILGCTHYPFLKPLLARMIPEHISLIDTGAAVARQLQRLL 219 >gi|171463476|ref|YP_001797589.1| glutamate racemase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193014|gb|ACB43975.1| glutamate racemase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 268 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 6/242 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL +L + +P++ +IY+AD PYG + R + L + + K Sbjct: 4 IGVFDSGVGGLSILDEALRQLPQHDYIYLADSANAPYGEKSSDWIATRSLGLCNYLASKE 63 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA ++R+ ++ +G P IK AA +Q+ ++ +L+T ATL+ Sbjct: 64 CDAI-VVACNTATAEAIKQIRAQL-AIPIIGVEPGIKPAAMQSQNHIVGVLATEATLKSD 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + S C + L +E + + + K +E I+ G D I Sbjct: 122 KFNALLATLPSDCQFIKQAGAGLVPLIESGNADGEDTLELLAKHLEP--IQDAG--ADTI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYP + R+L + +D SD++ R+ + L + L LS K Sbjct: 178 VLGCTHYPFLKKAIRKLLGESITLIDTSDAVVRQLKQQLESLKKESGNKEFGSVLLLSSK 237 Query: 256 PD 257 + Sbjct: 238 DE 239 >gi|254251913|ref|ZP_04945231.1| Glutamate racemase [Burkholderia dolosa AUO158] gi|124894522|gb|EAY68402.1| Glutamate racemase [Burkholderia dolosa AUO158] Length = 285 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 71/232 (30%), Positives = 108/232 (46%), Gaps = 9/232 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P FIYVAD PYG +D + +R + + ++ + Sbjct: 16 IGIFDSGLGGLSVLRAVRAHLPGESFIYVADARYVPYGERDDAFITERTIAIGEWLVGQR 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA R ++ +G P IK A + SG+ +L+T +TLR Sbjct: 76 AKAL-VIACNTATAQSIAAARERL-AIPVVGVEPGIKPAVQQSASGVAGVLATQSTLRSA 133 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ + + C L +E G + + E D + Sbjct: 134 RFQALLERHGAGCRFICQPGHGLVQAIERGDTGSPALRALLADYLHRMLDEG----ADTV 189 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 VL CTHYP ++ R + + +D SD+IAR+ L+ ++ H R DD Sbjct: 190 VLGCTHYPFLIATIRDIVGDRLSIVDTSDAIARQ---LVRVLDQHDLRAPDD 238 >gi|313497102|gb|ADR58468.1| Glutamate racemase [Pseudomonas putida BIRD-1] Length = 265 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 5/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL VL +++ L+P +YV D PYG +++R + ++ Sbjct: 8 IGVMDSGVGGLSVLAEIQRLLPNETLLYVGDCGHIPYGEKSPDYIRERCRHIAGFFHEQG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL+ Sbjct: 68 AKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSA 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + + + L +E + +++ ++G D + Sbjct: 127 KFAALLDRFANDVQVITQPCPGLVELIETG----DLASPALRQMLQGYVQPLLAAGCDTL 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +L CTHYP + + + P V +D ++AR+ R LL Sbjct: 183 ILGCTHYPFLRPLLAGMVPDDVAIIDTGAAVARQLRRLL 221 >gi|262374074|ref|ZP_06067351.1| glutamate racemase [Acinetobacter junii SH205] gi|262311085|gb|EEY92172.1| glutamate racemase [Acinetobacter junii SH205] Length = 290 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 75/267 (28%), Positives = 128/267 (47%), Gaps = 33/267 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL + Q++ +P +Y AD PYG D +++ L + L + Sbjct: 23 IGVFDSGIGGLSIAQEIASHLPNERILYYADTAHVPYGARSDQEIRE-LTAKAIEWLYRQ 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++V+ACNTA D LR + +G VPA+K A TQS ++++L+TPAT R Sbjct: 82 GCKIAVVACNTASAFSLDYLREHYGEHFPIVGLVPALKPAVLQTQSKVVAVLATPATFRG 141 Query: 135 TYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG--- 189 ++ + + + V+S+ L VE G ++ E C +E Sbjct: 142 KLIKEVMLKFAEPAGVKVLTVTSLKLVPFVE---AGEQMS--------EACLVELHNILQ 190 Query: 190 ----KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-------RCLLPRIN 238 + D +VL CTHYP + RQ+ + +D+ ++AR+ R L +I+ Sbjct: 191 PVVDQGADFLVLGCTHYPFLKDAIRQIFNEKLKLIDSGQAVARQTAYILIKNRLLCDKIS 250 Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQ 265 + TR+ F+SG+ + ++ ++Q Sbjct: 251 HNITRI----ECFVSGQNAVELQPVVQ 273 >gi|160892852|ref|ZP_02073641.1| hypothetical protein CLOL250_00382 [Clostridium sp. L2-50] gi|156865411|gb|EDO58842.1| hypothetical protein CLOL250_00382 [Clostridium sp. L2-50] Length = 259 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 5/197 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGG+ VL+++ LMPE ++IY D PYG + ++ L + L ++ Sbjct: 8 IGIFDSGIGGISVLKEIVALMPEENYIYYGDSAHAPYGTRQVADIQN-LSRSCVEFLLEH 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA + LR+ +P + +G PA+K A + + I++++TP TL++ Sbjct: 67 DAKAIVIACNTATSAAAAMLRADYPDIPVIGIEPALKPAVLWKEHDRIAVMATPMTLKQD 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L+H+Y + I+ V L VE D + +E+ ++E K D I Sbjct: 127 KFLSLMHTYEDRSVIYRVPCPKLVGFVENGDLDSPKLHDYL-QEVLSPYLE---KGIDAI 182 Query: 196 VLACTHYPLIVHVFRQL 212 VL CTHYP + + R + Sbjct: 183 VLGCTHYPFVEKMIRTV 199 >gi|303233055|ref|ZP_07319730.1| glutamate racemase [Atopobium vaginae PB189-T1-4] gi|302480830|gb|EFL43915.1| glutamate racemase [Atopobium vaginae PB189-T1-4] Length = 261 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 12/256 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL+++ LMP +F+Y+ D PYG+ + R + +++L Sbjct: 8 IGVFDSGVGGISVLKRLVELMPHENFVYMGDSAYNPYGSKTKQQIIDRSCTIVNELLAHS 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA + D LR FP + +G PA+K A + ++ + +L+TPATL Sbjct: 68 IKAL-VIACNTATSAASDYLRVQFPELPIIGIEPALKAALDHPKTMPVLVLATPATLTLE 126 Query: 136 YTSNLIHSYVSQ---CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 L H Q ++ + LA R+E+ + D++ +++ E G Sbjct: 127 KYQELEHKLGVQRNTSQVYRLGCKGLAHRIEQG----NLNADDLMQDLHTLLDEYRGV-V 181 Query: 193 DVIVLACTHYPLI-VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 + +VL CTHYP + H+ L P D + AR +L F Sbjct: 182 NSVVLGCTHYPFVKQHICDILGDVP--CYDGAIGTARHCLSVLSARGLLNPSEDAGTIEF 239 Query: 252 LSGKPDIAMRRLMQGF 267 LS P A Q F Sbjct: 240 LSSTPGAAQIAFYQSF 255 >gi|326795261|ref|YP_004313081.1| glutamate racemase [Marinomonas mediterranea MMB-1] gi|326546025|gb|ADZ91245.1| Glutamate racemase [Marinomonas mediterranea MMB-1] Length = 276 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 109/219 (49%), Gaps = 6/219 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ ++ I DSG GGL VL +R PE + Y AD PYG LK RL+ + + Sbjct: 1 MKYNVAIIDSGSGGLSVLNTIRRQSPELNLHYYADSCFSPYGEKSSEFLKSRLVQIGRYL 60 Query: 72 LDKYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +PV + V+ACNTA D LR S+ +G PA+K A +S+L+TP Sbjct: 61 EALSEPVHAIVLACNTATVEGIDALRRAV-SIPVVGVEPAVKPALVNPNVSRVSVLATPV 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ LI + + + L+SS LA ++ E + KEIE E Sbjct: 120 TIGSNRLQALISLWKNDKQVQLISSADLARLIDS---ADSRSESALCKEIERICSEVTVF 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 R DV+VLACTHYPL+ F + S V+ L+ S S++ + Sbjct: 177 RPDVLVLACTHYPLVRDRF-EGSLHGVEILEPSSSVSNQ 214 >gi|167588983|ref|ZP_02381371.1| glutamate racemase [Burkholderia ubonensis Bu] Length = 285 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + + L + Sbjct: 17 VGVFDSGLGGLSVLRAVRAQLPGESFVYVADSRNAPYGPRDEAFITERTLAI-GEWLARE 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA +R ++ +G P IK AAA + SG+ +L+T +TL Sbjct: 76 GAKALVVACNTATAQSIAAIRERL-AIPLVGVEPGIKPAAALSASGIAGVLATQSTLASA 134 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ Y + C L VE ++ ++G D + Sbjct: 135 RFQALLDRYGAGCRFICQPGHGLVEAVERG----DTNSPALRALLDGYLQPMLDAGADTL 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 VL CTHYP R L + +D SD+IAR+ AR L Sbjct: 191 VLGCTHYPFFTETIRDLFGDRLTIVDTSDAIARQLARVL 229 >gi|167031792|ref|YP_001667023.1| glutamate racemase [Pseudomonas putida GB-1] gi|189030364|sp|B0KNE7|MURI_PSEPG RecName: Full=Glutamate racemase gi|166858280|gb|ABY96687.1| glutamate racemase [Pseudomonas putida GB-1] Length = 265 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 6/247 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL VL +++ L+P +YVAD PYG +++R + ++ Sbjct: 10 VMDSGVGGLSVLAEIQRLLPNETLLYVADCGHVPYGEKSPDYIRQRCRHIAGFFHEQGAK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL+ Sbjct: 70 AM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSAKF 128 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + + + L +E + +++ + G D ++L Sbjct: 129 AALLDRFANDVQVITQPCPGLVELIETG----DLTSPVLRQMLWGYVQPLLAAGCDTLIL 184 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTHYP + + + P V +D ++AR+ + LL + D + S P+ Sbjct: 185 GCTHYPFLRPLLAGMVPADVAVIDTGAAVARQLQRLLGANDLLAEGPAGDARFWTSADPE 244 Query: 258 IAMRRLM 264 I +R+++ Sbjct: 245 I-LRKIL 250 >gi|86130768|ref|ZP_01049367.1| Asp/Glu/hydantoin racemase [Dokdonia donghaensis MED134] gi|85818179|gb|EAQ39339.1| Asp/Glu/hydantoin racemase [Dokdonia donghaensis MED134] Length = 268 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 20/260 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-------KKRLM 65 +N I +FDSGIGG + +++ +P IY+AD PYG + ++L+ Sbjct: 4 KNVIGVFDSGIGGTSIWKEIVTRLPGEDTIYIADSKNAPYGAKSKEDIIALSVKNTEKLI 63 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125 L + I+ VIACNTA T + LR + + F+G PAIK AA +QS I I Sbjct: 64 ALGAKII--------VIACNTATTNAINYLRENY-KIPFIGIEPAIKPAAVQSQSKAIGI 114 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T TL + + + V L +E+ ++ E+ +E Sbjct: 115 LATKGTLNSSLFQTTSERWTQGVDVIEVIGEGLVPLIEQG----DLENIELYNLLESYIQ 170 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 K D +VL C+HYP ++ + +++ P V +D+ ++AR+ +L +N V Sbjct: 171 PMVEKNIDYLVLGCSHYPYLIPLLKKMLPPHVAIIDSGLAVARQTEAVLKELNNLSGDVS 230 Query: 246 DDHALFLSGKPDIAMRRLMQ 265 +H L+ +G + + L++ Sbjct: 231 SEHYLYTNGDVKVLKKVLLR 250 >gi|318041257|ref|ZP_07973213.1| glutamate racemase [Synechococcus sp. CB0101] Length = 272 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/248 (29%), Positives = 112/248 (45%), Gaps = 16/248 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +++ +P+ IY+AD PYG ++ + ++ Sbjct: 6 IGIFDSGLGGLSVWRQVVHHLPDESVIYLADQAHVPYGQRSAQEIQAYCSEIAGQLIAMG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA + + LR FP + LG PA+K A T SG++ +++TPAT + Sbjct: 66 CKAI-VVACNTASAVALEPLRQAFPQLPILGLEPAVKPAVELTNSGVVGVMATPATFQGE 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE-GKRTDV 194 + + + + LA VE I E E + F+ D Sbjct: 125 LYRATVGRWAGDVQVVEQVCIGLADLVE-----IGELEGERCDALLRSFLNPMLEAGADT 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA----- 249 IVL CTHYP ++ R+L + LD + ++AR L + T Q + A Sbjct: 180 IVLGCTHYPFVIEAIRRLVGPGLAVLDPAPAVARH----LGEVLTAQGLLNGSSAGRELR 235 Query: 250 LFLSGKPD 257 F S +PD Sbjct: 236 FFTSAQPD 243 >gi|91782687|ref|YP_557893.1| glutamate racemase [Burkholderia xenovorans LB400] gi|91686641|gb|ABE29841.1| glutamate racemase [Burkholderia xenovorans LB400] Length = 295 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 17/233 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++ + Sbjct: 25 IFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLVRQGAK 84 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA +R P + +G P IK AA +++ + +L+T TLR Sbjct: 85 AL-VVACNTATAQSIAMVREKLP-IPLVGVEPGIKPAALQSKTRVAGVLATQVTLRSARF 142 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L+ Y + C L VE G E++ + G D +VL Sbjct: 143 QALLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRGYLQPMLDAGADTLVL 198 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 CTHYP + R++ + +D S +IAR+ RV D H L Sbjct: 199 GCTHYPFLDTAIREIVGDRLALIDTSVAIARQLE-----------RVLDQHGL 240 >gi|294649135|ref|ZP_06726577.1| glutamate racemase [Acinetobacter haemolyticus ATCC 19194] gi|292825018|gb|EFF83779.1| glutamate racemase [Acinetobacter haemolyticus ATCC 19194] Length = 295 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 12/224 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL + Q++ +P +Y AD PYG D ++ L + L + Sbjct: 23 IGIFDSGIGGLSIAQEIALHLPNERILYYADTAHVPYGARSDQEIRN-LTAQAIEWLYRQ 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++V+ACNTA D LR + +G VPA+K A TQ+ ++++L+TPAT R Sbjct: 82 GCKVAVVACNTASAFSLDYLRDHYGERFPIIGLVPALKPAVIQTQTKVVAVLATPATFRG 141 Query: 135 TYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEKEGK 190 +++ ++ + + V+++ L VE G ++ E + K+I IE+ Sbjct: 142 RLIKDVMLNFAEPAGVKVLTVTNLALVPFVE---AGEQMSEACKAVLKQILQPVIEQGA- 197 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYP + RQ+ + +D+ ++AR+ +L Sbjct: 198 --DFLVLGCTHYPFLKPAIRQVFDEKLKLIDSGQAVARQTAYIL 239 >gi|226951878|ref|ZP_03822342.1| glutamate racemase [Acinetobacter sp. ATCC 27244] gi|226837418|gb|EEH69801.1| glutamate racemase [Acinetobacter sp. ATCC 27244] Length = 295 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 12/224 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL + Q++ +P +Y AD PYG D ++ L + L + Sbjct: 23 IGIFDSGIGGLSIAQEIALHLPNERILYYADTAHVPYGARSDQEIRN-LTAQAIEWLYRQ 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++V+ACNTA D LR + +G VPA+K A TQ+ ++++L+TPAT R Sbjct: 82 GCKVAVVACNTASAFSLDYLRDHYGERFPIIGLVPALKPAVIQTQTKVVAVLATPATFRG 141 Query: 135 TYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEKEGK 190 +++ ++ + + V+++ L VE G ++ E + K+I IE+ Sbjct: 142 RLIKDVMLNFAEPAGVKVLTVTNLALVPFVE---AGEQMSEACKAVLKQILQPVIEQGA- 197 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYP + RQ+ + +D+ ++AR+ +L Sbjct: 198 --DFLVLGCTHYPFLKPAIRQVFDEKLKLIDSGQAVARQTAYIL 239 >gi|149927946|ref|ZP_01916196.1| glutamate racemase [Limnobacter sp. MED105] gi|149823385|gb|EDM82618.1| glutamate racemase [Limnobacter sp. MED105] Length = 278 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 10/259 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL+ M +P F +VAD+ PYG+ H + R++ L S+ L Sbjct: 12 AVGVFDSGVGGLSVLKAMLNYLPAERFRFVADERYLPYGDKPQHEITDRVLTL-SNWLRN 70 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V+ACNTA ++ R+ + +G PA+K A+ T++G++ IL+T T+ Sbjct: 71 QECKAMVMACNTATAAGANQARAAHANWPIVGIEPAVKPASMLTKTGVVGILATTNTVAS 130 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ + + L +E+ + E I+ ++ E K DV Sbjct: 131 ERFKGLVERFDPLAKVIAHPCPGLVELIEQS----PMPEPAIEALLKPVLAELLQKNADV 186 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-----RINTHQTRVFDDHA 249 IVL CTHYP + H+ +L+ V ++ +A++ + L + + + + Sbjct: 187 IVLGCTHYPFVAHLISKLAGPDVTVIETGLPVAKQLKTRLESEGLLNMGEAHLPMIERVS 246 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G+P+ +L+ G Sbjct: 247 FFTTGQPEAFKTKLVNLLG 265 >gi|209521399|ref|ZP_03270111.1| glutamate racemase [Burkholderia sp. H160] gi|209498175|gb|EDZ98318.1| glutamate racemase [Burkholderia sp. H160] Length = 295 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 6/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I IFDSG+GGL VL+ +R +P +YVAD + PYG +D + R + + + Sbjct: 20 QAPIGIFDSGLGGLSVLRAVRAQLPAEALLYVADSLYAPYGERDDDFITDRTLAIGEWLA 79 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + VL V+ACNTA +R P + +G P +K AA ++S + +L+T ATL Sbjct: 80 AQGAKVL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKSRVAGVLATQATL 137 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ Y + C L VE G E++ + Sbjct: 138 RSARFQGLLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRSYLEPMLDAGA 193 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D +VL CTHYP + R + + +D S +IAR+ Sbjct: 194 DTLVLGCTHYPFLDAAIRDIVGERLTLIDTSVAIARQ 230 >gi|296274260|ref|YP_003656891.1| glutamate racemase [Arcobacter nitrofigilis DSM 7299] gi|296098434|gb|ADG94384.1| glutamate racemase [Arcobacter nitrofigilis DSM 7299] Length = 266 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 1/250 (0%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSGIGGL V++ + ++ Y+AD PYG + K + + ++ + Sbjct: 5 VFDSGIGGLTVVKAITEVLKGAEIFYIADTKFAPYGEKSKEQILKHSFNIANYLVKTHNI 64 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ACNTA + ELR FP++ +G P IK A + +++G I IL+TPATL+ Sbjct: 65 DALVVACNTATSAAIKELREEFPNLIVVGTEPGIKPAISLSKNGKIGILATPATLKGEKY 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L+ + + V++ G I+ ++ + ++ K D IVL Sbjct: 125 QLLVDKLSNASSNITLYEQACPGLVQQIENG-DIEGEKTFEMLKNWLKPMSEKGVDTIVL 183 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTHYPL+ +V +++ + ++ +IA R + L V + F S + Sbjct: 184 GCTHYPLVGNVIKKIMGENTNLIETGYAIANRLKDLSKNCGHFNDGVLKVNVYFTSDINE 243 Query: 258 IAMRRLMQGF 267 + +++ + Sbjct: 244 TMISKILNSW 253 >gi|15639397|ref|NP_218846.1| glutamate racemase (murI) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025639|ref|YP_001933411.1| glutamate racemase [Treponema pallidum subsp. pallidum SS14] gi|11386905|sp|O83421|MURI_TREPA RecName: Full=Glutamate racemase gi|229486284|sp|B2S303|MURI_TREPS RecName: Full=Glutamate racemase gi|3322687|gb|AAC65392.1| glutamate racemase (murI) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018214|gb|ACD70832.1| glutamate racemase [Treponema pallidum subsp. pallidum SS14] Length = 268 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 75/267 (28%), Positives = 127/267 (47%), Gaps = 13/267 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +++ Q DSGIGGL +R +PE +YVAD V FPYGN + R + Sbjct: 3 DRREQFQYAFLDSGIGGLPYAHALRVRVPEASLVYVADRVYFPYGNKSSAQIIARASAVL 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + + P + V+ACN+ + LR+ VPAIKQA A + I +L+T Sbjct: 63 QKVQTNFSPHIVVLACNSMSVNALEFLRAQVSVPVVG-VVPAIKQAVACSHKKHIGVLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-IEGCFIEK 187 T+ YT+ L + + C + + L +E G+ + +++++E + + Sbjct: 122 QCTITHPYTACLRAQFGAGCVFQMRADARLIECLER---GLIFEVEDMQREAVARSVMPF 178 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + DV+VLACTH+ + H+F+ +D+ + + RR L P Q+++ + Sbjct: 179 QEAGVDVLVLACTHFVHVRHLFQDCVGTSCTVVDSLEGVVRRTLRLCP----PQSQLRGN 234 Query: 248 HALFLSGKPD--IAMR--RLMQGFGLK 270 A +++G D A R R Q FGL+ Sbjct: 235 AACYVTGARDAVCAARYARYAQHFGLR 261 >gi|323339853|ref|ZP_08080122.1| glutamate racemase [Lactobacillus ruminis ATCC 25644] gi|323092726|gb|EFZ35329.1| glutamate racemase [Lactobacillus ruminis ATCC 25644] Length = 259 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 111/245 (45%), Gaps = 12/245 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL VL++ +M +I+ D PYG + + L K+++ F Sbjct: 10 IGIFDSGMGGLTVLRECVKIMGNEDYIFYGDSFNAPYGVKSTEQVYRLSKKIVQRFL--- 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA + LR +P + +G PA+K A + ++ + +++TP TL Sbjct: 67 -KQNVKAIVIACNTATSASASRLRKEYPELPIIGLEPALKPAVLHKKNSTVLVMATPLTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + NL++ + Q I + + L VE +I E+KK + G Sbjct: 126 KEKKFENLMNRFEDQAKIIKLPAPDLVEFVERG----EIDTPELKKYLRSILNPYLGN-I 180 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTH+P +Q+ V +D AR R LL N + FL Sbjct: 181 DAVVLGCTHFPFAKRAIQQIVGNDVYVVDGGAGAARELRRLLEAKNERRKENRIGKIEFL 240 Query: 253 SGKPD 257 + PD Sbjct: 241 NSNPD 245 >gi|311108362|ref|YP_003981215.1| glutamate racemase [Achromobacter xylosoxidans A8] gi|310763051|gb|ADP18500.1| glutamate racemase [Achromobacter xylosoxidans A8] Length = 267 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 5/216 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I I+DSG+GGL VL+ +R +P + +YVAD PYG +++R + +D Sbjct: 4 ESPIGIYDSGVGGLSVLRAIRDALPHEYLLYVADSAHVPYGEKTQDYVEQRASTI-ADYF 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Q V+ACNTA +LR P + +G PAIK AA T SG++ + +T TL Sbjct: 63 VSRQAKAMVVACNTATAAAIAQLRQRHPQLIIIGVEPAIKPAAHLTSSGVVGVFATTGTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+ + I VE+ G+ + E + + E Sbjct: 123 ASPKFAALVQRQAPEVRILFRPCPEWVRLVEQ---GV-LSGPEAEAAVRAPVAELREAGA 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 DV+VL CTH+P + + + V L+ +AR Sbjct: 179 DVLVLGCTHFPFLRDAIQAAAGPGVPLLETGAPVAR 214 >gi|258515013|ref|YP_003191235.1| glutamate racemase [Desulfotomaculum acetoxidans DSM 771] gi|257778718|gb|ACV62612.1| glutamate racemase [Desulfotomaculum acetoxidans DSM 771] Length = 266 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 6/240 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL +++++R L+PE IY AD PYG ++ R F D L K Sbjct: 6 AIGLFDSGVGGLSIMKEVRKLLPEEDLIYFADSAYCPYGIKTPEVIRARC-FSICDFLLK 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+A NT D +R + + +G PAIK AA +++G I IL+T T+ Sbjct: 65 EGVKLIVVASNTTSVAGLDLIRKHY-RIPIVGVEPAIKPAAELSRNGKIGILATGVTING 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 S+L+ + S + L VEE E + + ++ + +D Sbjct: 124 ERFSSLVERFGSNIEVFTQPCPGLVELVEEGKLDCPQTEALLHRYMDPMLVHG----SDT 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 IVL CTHYP + + +++ + +D +++AR+ ++ +N T + SG Sbjct: 180 IVLGCTHYPFLRSLVEKIAGPQITVIDTGEAVARQVSRIVNTLNQISTGKQGKEIFYTSG 239 >gi|169634818|ref|YP_001708554.1| putative glutamate racemase [Acinetobacter baumannii SDF] gi|169153610|emb|CAP02797.1| putative glutamate racemase [Acinetobacter baumannii] Length = 266 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 16/264 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL + + +R +P IY AD PYGN E + R L S+++ Sbjct: 8 IGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGNRESDWIVSRTTHLISNLVAHG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNT + + +R+ ++ + PA+K A A T S I++L+T T++ Sbjct: 68 KCKAIVIACNTMTAVAVETIRAQI-NVPLISIEPAVKPAVAMTVSKHIAVLATATTVKGK 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +LI +Y + LV + LA ++E K E+K ++ ++ D I Sbjct: 127 NLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKVDTI 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN----THQTRVFDDHALF 251 +L CTHYP + +++ + ++ S+++ + L+ ++N + ++ +H ++ Sbjct: 183 ILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ---LIRQLNQYHLSSESPNEGNHIIW 239 Query: 252 LSGKP----DIAMRRLMQGFGLKS 271 S P D+ L + +K+ Sbjct: 240 TSSDPLEVADVTFSLLSEKLSVKA 263 >gi|291059797|gb|ADD72532.1| glutamate racemase [Treponema pallidum subsp. pallidum str. Chicago] Length = 311 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 75/267 (28%), Positives = 127/267 (47%), Gaps = 13/267 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +++ Q DSGIGGL +R +PE +YVAD V FPYGN + R + Sbjct: 46 DRREQFQYAFLDSGIGGLPYAHALRVRVPEASLVYVADRVYFPYGNKSSAQIIARASAVL 105 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + + P + V+ACN+ + LR+ VPAIKQA A + I +L+T Sbjct: 106 QKVQTNFSPHIVVLACNSMSVNALEFLRAQVSVPVVG-VVPAIKQAVACSHKKHIGVLAT 164 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-IEGCFIEK 187 T+ YT+ L + + C + + L +E G+ + +++++E + + Sbjct: 165 QCTITHPYTACLRAQFGAGCVFQMRADARLIECLER---GLIFEVEDMQREAVARSVMPF 221 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + DV+VLACTH+ + H+F+ +D+ + + RR L P Q+++ + Sbjct: 222 QEAGVDVLVLACTHFVHVRHLFQDCVGTSCTVVDSLEGVVRRTLRLCP----PQSQLRGN 277 Query: 248 HALFLSGKPD--IAMR--RLMQGFGLK 270 A +++G D A R R Q FGL+ Sbjct: 278 AACYVTGARDAVCAARYARYAQHFGLR 304 >gi|260553350|ref|ZP_05825964.1| glutamate racemase [Acinetobacter sp. RUH2624] gi|260405187|gb|EEW98685.1| glutamate racemase [Acinetobacter sp. RUH2624] Length = 266 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 5/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSRYVPYGDRESDWIVSRTTHLISNLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNT + + +R+ ++ + PA+K A A T S I++L+T T+ Sbjct: 65 AQGKCKAIVVACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAMTVSKHIAVLATATTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +LI +Y + LV + LA ++E K E+K ++ ++ Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D I+L CTHYP + +++ + ++ S+++ + Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216 >gi|226357251|ref|YP_002786991.1| glutamate racemase [Deinococcus deserti VCD115] gi|226319241|gb|ACO47237.1| putative glutamate racemase [Deinococcus deserti VCD115] Length = 283 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 27/254 (10%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL ++R MP ++Y+AD P G D ++ D+ D+ Sbjct: 9 VFDSGVGGLSVLAELRRAMPHEEYLYLADTAHVPIGARSDEEIR--------DLTDRAVS 60 Query: 78 VLS-------VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L V+ACNTA LR+ F ++ +G VPA+K A T+SG++ +L+TP Sbjct: 61 ALHARGVKGVVVACNTASAFSLSHLRARF-AIPIIGLVPAVKPAVEATRSGVVGVLATPG 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASR----VEEYACGIKIKEDEIKKEIEGCFIE 186 TLR T +++I + + ++ ++ SR + E + + +E+ ++ Sbjct: 120 TLRGTLLADVIRQFADPAGVKVLQAV---SRELVPLVEAGQADSSETQAVLREVLSPLVQ 176 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D +VL CTHYP + +D+ ++AR R +L N R Sbjct: 177 AG---ADQLVLGCTHYPFLAGSIHAEFGNCFTLVDSGAAVARHTRRVLAAENLLTARTET 233 Query: 247 DHALFL-SGKPDIA 259 +L +G D A Sbjct: 234 GKVTYLVTGDVDAA 247 >gi|73541920|ref|YP_296440.1| glutamate racemase [Ralstonia eutropha JMP134] gi|123624580|sp|Q46Z37|MURI_RALEJ RecName: Full=Glutamate racemase gi|72119333|gb|AAZ61596.1| glutamate racemase [Ralstonia eutropha JMP134] Length = 272 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 6/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++R L+P +Y+AD PYG + ++ R + +L + Sbjct: 9 IGVFDSGLGGLSVLREIRALLPHESLLYLADSKYAPYGEKPEAFVQARTLQACEWLLAQG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA + LR T P + +G P +K AAA +QS ++ +L+T TL+ Sbjct: 69 CKAL-VIACNTATGHAVELLRQTLP-VPIIGVEPGLKPAAAASQSKVVGVLATANTLKSG 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ S + + + L +E+ I +I+ ++ D + Sbjct: 127 KFARLLASLDGESRFICEAGLGLVPLIEQG----DIDGPDIRGRLDNYLTPMLEAGADTL 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VL CTHYP + R + + +D +IAR+ Sbjct: 183 VLGCTHYPFLSDTIRDMVGNQLTLVDTGSAIARQ 216 >gi|307730275|ref|YP_003907499.1| glutamate racemase [Burkholderia sp. CCGE1003] gi|307584810|gb|ADN58208.1| glutamate racemase [Burkholderia sp. CCGE1003] Length = 290 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 14/216 (6%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L + Sbjct: 24 IFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFIADRTLAI-GEWLARQGA 82 Query: 78 VLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 VIACNTA L+++ L S+ +G P IK AA ++S + +L+T TLR Sbjct: 83 KALVIACNTATAQSIALVRERL-----SIPLVGVEPGIKPAALQSRSRVAGVLATQVTLR 137 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 T L+ Y + C L VE G +++ + G D Sbjct: 138 STRFQALLERYAADCRFICQPGHGLVQAVERCDVG----SAQLRALLAGYLQPMLEAGAD 193 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +VL CTHYP + R + + +D S +IAR+ Sbjct: 194 TLVLGCTHYPFLDAAIRDIVGERMALIDTSVAIARQ 229 >gi|218887895|ref|YP_002437216.1| glutamate racemase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758849|gb|ACL09748.1| glutamate racemase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 308 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 7/208 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + S ++ + Sbjct: 32 IGMFDSGVGGLTVLKALRTRMPCEDILYLGDTARLPYGTKSAETITRYAVQAASRLVQRR 91 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 +L V+ACNTA ++ D LR+ P + +G V P + A ++ G I++++T +T+R Sbjct: 92 IKLL-VVACNTATSVALDALRAANPGLPVVGVVQPGAQAACRASRRGNIAVIATESTIRG 150 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-- 192 IH I + EE KI ED + ++ F G T Sbjct: 151 RAYHKAIHGLRPDAQIIGQPCPLFVPLAEEGWVDGKIVEDIAARYLDPIFRPASGSDTPE 210 Query: 193 --DVIVLACTHYPLIVHVFRQ-LSPWPV 217 D +VL CTH+PL+ R + P PV Sbjct: 211 TPDCLVLGCTHFPLLARAIRNVIGPEPV 238 >gi|332519960|ref|ZP_08396424.1| glutamate racemase [Lacinutrix algicola 5H-3-7-4] gi|332044519|gb|EGI80713.1| glutamate racemase [Lacinutrix algicola 5H-3-7-4] Length = 260 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 24/235 (10%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +NSI IFDSG+GG + +++ L+P IY+AD PYG+ + + + ++ Sbjct: 3 KNSIGIFDSGVGGTSIFKEIHALLPNESTIYLADSKYAPYGSKTKNEIIDLSIKNTEFLI 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D ++ VIACNTA T D LR+T+ + F+G PAIK AA TQ+ I IL+T TL Sbjct: 63 DNNCKII-VIACNTATTNAIDILRNTY-KIPFIGIEPAIKPAALQTQTKAIGILATKGTL 120 Query: 133 RRT--------YTSNL-IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 YT+ + + V + + L+ + L + E+ +KK ++ Sbjct: 121 SSALFHKTTDLYTNGIKVIEQVGEGIVQLIENGDLHTPKMEFL---------LKKYLQPM 171 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 E D +VL CTHYP ++ + L P V +D+ ++A++ + +L + N Sbjct: 172 LAE----NIDYLVLGCTHYPYLMPILLNLLPKHVKIIDSGLAVAKQTKSVLEQYN 222 >gi|193078720|gb|ABO13787.2| Glutamate racemase [Acinetobacter baumannii ATCC 17978] Length = 266 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 5/217 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 5 NNPIGMIDSGLGGLSLFKYIRQALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLISNLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + VIACNT + + +R+ ++ + PA+K A A T S I++L+T T+ Sbjct: 65 THGKCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAMTLSKHIAVLATATTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +LI +Y + LV + LA ++E K E+K ++ ++ Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D I+L CTHYP + +++ + ++ S+++ + Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216 >gi|71892359|ref|YP_278093.1| glutamate racemase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796465|gb|AAZ41216.1| glutamate racemase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 277 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 3/193 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +ILI DSG+GGL + +R L+P ++Y D+ FPYG + + R+ + + Sbjct: 10 QPTILILDSGVGGLSIYIAIRKLLPHVRYLYFFDNQAFPYGEHSEFFIINRVTSIIEAVQ 69 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q L +I CNTA + L++ F +G +PAIK A+ T++G+I +L+T T+ Sbjct: 70 EQHQLDLVIIGCNTASVVSLKILQNHFLC-PIVGVIPAIKLASKLTKNGVIGVLATHRTV 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 YT +LI + ++ + L+ + L + E G KI ++ + K+ Sbjct: 129 NHDYTLSLIKRFANKYKVMLLGTSELVNLAESKIHGKKIPISILRDILTPWLNMKQPP-- 186 Query: 193 DVIVLACTHYPLI 205 D IVL CTH+ L+ Sbjct: 187 DTIVLGCTHFSLL 199 >gi|226326749|ref|ZP_03802267.1| hypothetical protein PROPEN_00609 [Proteus penneri ATCC 35198] gi|225204586|gb|EEG86940.1| hypothetical protein PROPEN_00609 [Proteus penneri ATCC 35198] Length = 206 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 7/194 (3%) Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140 VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+T AT++R YT L Sbjct: 11 VIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLATRATVKRPYTHEL 70 Query: 141 IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 I + + C +H + S L E G ++ D ++K + KE D +VL CT Sbjct: 71 IERFATDCKVHSLGSAELVELAERKLHGEEVSLDALRKILTPWLKMKEPP--DTVVLGCT 128 Query: 201 HYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA- 259 H+PL+ + P +D+ +IARR L+ +N + + ++ + K D Sbjct: 129 HFPLLADELLSVLPDGTRIIDSGAAIARRTAWLV--VNQAKIKGSNEISFAYCLKEDENS 186 Query: 260 --MRRLMQGFGLKS 271 ++ ++ GFG +S Sbjct: 187 ELLKPVLAGFGFES 200 >gi|330941681|gb|EGH44456.1| glutamate racemase [Pseudomonas syringae pv. pisi str. 1704B] Length = 270 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 5/240 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL ++R L+ +Y+AD PYG + +R + + ++ Sbjct: 15 IFDSGVGGLSVLNEIRQLLLSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 74 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+ Sbjct: 75 AL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 133 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + + + L +E + +I++ ++ R D I+L Sbjct: 134 AALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARCDTIIL 189 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTHYP + + R++ P V +D ++AR+ + LL R + V D + S PD Sbjct: 190 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVARDTVYWSSDIPD 249 >gi|170723614|ref|YP_001751302.1| glutamate racemase [Pseudomonas putida W619] gi|229486248|sp|B1JEP3|MURI_PSEPW RecName: Full=Glutamate racemase gi|169761617|gb|ACA74933.1| glutamate racemase [Pseudomonas putida W619] Length = 265 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 5/239 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL VL +++ L+P +YVAD PYG +++R + ++ Sbjct: 10 VMDSGVGGLSVLAEIQRLLPSESLLYVADCGHVPYGEKTPDYIRQRCRRI-AEFFQAQGA 68 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ACNTA +LR +P +G PA+K AAA T+SG++ +L+T TL+ Sbjct: 69 KAMVLACNTATVAAVADLRERYPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSAKF 128 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ + + + L +E G ++++ + G D ++L Sbjct: 129 AALLDRFANDVRVVTQPCPGLVELIETGDLG----SLQLRQLLLGYVQPLLAAGCDTLIL 184 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 CTHYP + + + P V +D ++AR+ + LL D A + S P Sbjct: 185 GCTHYPFLRPLLAGMVPADVAIIDTGAAVARQLKRLLAARELLADGPARDAAFWSSADP 243 >gi|296162473|ref|ZP_06845264.1| glutamate racemase [Burkholderia sp. Ch1-1] gi|295887286|gb|EFG67113.1| glutamate racemase [Burkholderia sp. Ch1-1] Length = 284 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 17/233 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++ + Sbjct: 14 IFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLVKQGAK 73 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA +R P + +G P IK AA +++ + +L+T TLR Sbjct: 74 AL-VVACNTATAQSIAMVREKLP-IPLVGVEPGIKPAALQSKTRVAGVLATQVTLRSARF 131 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L+ Y + C L VE I E+ + G D +VL Sbjct: 132 QALLERYAADCRFLCQPGHGLVQAVER----CDISSAELHALLRGYLQPMLDAGADTLVL 187 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 CTHYP + R + + +D S +IAR+ RV D H L Sbjct: 188 GCTHYPFLDTAIRDIVGDRLVLIDTSVAIARQLE-----------RVLDQHGL 229 >gi|46579181|ref|YP_009989.1| glutamate racemase [Desulfovibrio vulgaris str. Hildenborough] gi|120603245|ref|YP_967645.1| glutamate racemase [Desulfovibrio vulgaris DP4] gi|46448594|gb|AAS95248.1| glutamate racemase [Desulfovibrio vulgaris str. Hildenborough] gi|120563474|gb|ABM29218.1| glutamate racemase [Desulfovibrio vulgaris DP4] gi|311233019|gb|ADP85873.1| glutamate racemase [Desulfovibrio vulgaris RCH1] Length = 282 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 6/217 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + S ++++ Sbjct: 10 IGLFDSGVGGLTVLKALRQRMPCEDMLYLGDTARLPYGTKSSETIARYALQATSKLVERR 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 +L V+ACNTA ++ D LR +P + +G V P + + + G I++++T +T+R Sbjct: 70 IKLL-VVACNTATSVALDTLREAYPGIPVIGVVEPGAQASCRASLQGRIAVIATESTIRG 128 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG----K 190 IH Q HI + + EE I E + ++ F G + Sbjct: 129 RAYHKAIHRLRPQAHIVGQACPLFVPLAEEGWVDGPIAESIAARYLDPIFKPASGSDRVE 188 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTH+PL+ R + V +D++ + A Sbjct: 189 TPDCLVLGCTHFPLLARAIRNVIGPDVVIVDSAATTA 225 >gi|293607195|ref|ZP_06689536.1| glutamate racemase [Achromobacter piechaudii ATCC 43553] gi|292814287|gb|EFF73427.1| glutamate racemase [Achromobacter piechaudii ATCC 43553] Length = 279 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 8/239 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I ++DSG+GGL VL+ +R + + +YVAD PYG +++R + + + Sbjct: 8 SPIGVYDSGVGGLSVLRAIRDALSDESLLYVADSAHVPYGEKSQDFVEQRALTVADYFVS 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ + V+ACNTA ++R P + +G PAIK AA T SG++ + +T TL Sbjct: 68 RHAKAM-VVACNTATAAAIAQVRRRHPGLIVIGVEPAIKPAAHLTHSGVVGVFATTGTLA 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ + I L VE+ ++ + + G + D Sbjct: 127 SPKFAALVQREAPEVRILLHPCPQWVRLVEQG----ELSGPAVDAAVAGPVAQLRAAGAD 182 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDDHA 249 V+VL CTH+P + + + V L+ +AR R L + T R D HA Sbjct: 183 VLVLGCTHFPFLRDAIQAAAGPGVPLLETGAPVARWLRHQLQERALLCTDSARTADTHA 241 >gi|26987472|ref|NP_742897.1| glutamate racemase [Pseudomonas putida KT2440] gi|38258012|sp|Q88PW2|MURI_PSEPK RecName: Full=Glutamate racemase gi|24982136|gb|AAN66361.1|AE016264_5 glutamate racemase [Pseudomonas putida KT2440] Length = 265 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 5/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL VL +++ L+P +YV D PYG +++R + ++ Sbjct: 8 IGVMDSGVGGLSVLAEIQRLLPNETLLYVGDCGHIPYGEKSPDYIRERCRRIAGFFHEQG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL+ Sbjct: 68 AKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSA 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + + + L +E + +++ ++G D + Sbjct: 127 KFAALLDRFANDVQVITQPCPGLVELIEAG----DLVSPAVRQLLQGYVQPLLAAGCDTL 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +L CTHYP + + + P V +D ++AR+ + LL Sbjct: 183 ILGCTHYPFLRPLLAGMVPDDVAIIDTGAAVARQLQRLL 221 >gi|148381502|ref|YP_001256043.1| glutamate racemase [Clostridium botulinum A str. ATCC 3502] gi|153933747|ref|YP_001385877.1| glutamate racemase [Clostridium botulinum A str. ATCC 19397] gi|153937684|ref|YP_001389284.1| glutamate racemase [Clostridium botulinum A str. Hall] gi|166231033|sp|A7FZC4|MURI_CLOB1 RecName: Full=Glutamate racemase gi|166231034|sp|A5I7T7|MURI_CLOBH RecName: Full=Glutamate racemase gi|148290986|emb|CAL85122.1| glutamate racemase [Clostridium botulinum A str. ATCC 3502] gi|152929791|gb|ABS35291.1| glutamate racemase [Clostridium botulinum A str. ATCC 19397] gi|152933598|gb|ABS39097.1| glutamate racemase [Clostridium botulinum A str. Hall] Length = 257 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 8/231 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMSK 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL+ Y I + L +E+ GI + D I ++ F + + ++ I Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRV 244 VL CTHYP I ++++ +D S +R + L N T + RV Sbjct: 182 VLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLTEENRV 232 >gi|295676105|ref|YP_003604629.1| glutamate racemase [Burkholderia sp. CCGE1002] gi|295435948|gb|ADG15118.1| glutamate racemase [Burkholderia sp. CCGE1002] Length = 295 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 6/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + + Sbjct: 23 IGIFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFITDRTLAIGEWLAARG 82 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R P + +G P +K AA ++S + +L+T ATLR Sbjct: 83 AKAL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKSRVAGVLATQATLRSA 140 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ Y + C L VE G E++ + D + Sbjct: 141 RFQGLLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRSYLQPMLDAGADTL 196 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VL CTHYP + R + + +D S +IAR+ Sbjct: 197 VLGCTHYPFLDAAIRDIVGERLALIDTSVAIARQ 230 >gi|257095297|ref|YP_003168938.1| glutamate racemase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047821|gb|ACV37009.1| glutamate racemase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 261 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 5/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL + +P +Y+AD PYG+ +D ++ R++ + ++D+ Sbjct: 2 IGVFDSGLGGLSVLAAIARALPRADLVYLADTAHVPYGDKDDAFIRSRVLRIGRHLVDQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ V+ACNTA R +FP + +G P +K AAA ++SG I++L+T +T R Sbjct: 62 CGVI-VVACNTATAAAVAAFRESFPMLPVVGVEPGVKPAAAASRSGRIAVLATASTARSQ 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + LI + + + A+RVE +++++ + +E D I Sbjct: 121 RLAQLIRQHAGSVRVDVEPCPGWATRVES----LRLEDPDFVEEARQHLAPLLAAGVDQI 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VL CTHY + + +D +D++AR+ Sbjct: 177 VLGCTHYAFLCPTLEPIVAQRASLVDVADAVARQ 210 >gi|187923408|ref|YP_001895050.1| glutamate racemase [Burkholderia phytofirmans PsJN] gi|187714602|gb|ACD15826.1| glutamate racemase [Burkholderia phytofirmans PsJN] Length = 284 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 17/238 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++ Sbjct: 9 RTPVGIFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLV 68 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +R P + +G P +K AA +++ + +L+T TL Sbjct: 69 KQGAKAL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKTRVAGVLATQVTL 126 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ Y + C L VE G E++ + G Sbjct: 127 RSARFQALLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRGYLQPMLDAGA 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTHYP + R + + +D S +IAR+ RV D H L Sbjct: 183 DTLVLGCTHYPFLDAAIRDIVGDRLMLIDTSIAIARQLE-----------RVLDQHGL 229 >gi|313904511|ref|ZP_07837887.1| glutamate racemase [Eubacterium cellulosolvens 6] gi|313470653|gb|EFR65979.1| glutamate racemase [Eubacterium cellulosolvens 6] Length = 269 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 9/204 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K ++ I +FDSG+GGL VL+++ +PE F+Y D PYG E +++ M + Sbjct: 9 KYKDYIGVFDSGVGGLSVLKELVKELPEEDFLYFGDSANAPYGEKEIGTIRELSMKIADR 68 Query: 71 IL-DKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILST 128 ++ D + + VIACNTA + E+R+ + M +G PA+K AA + + G I +++T Sbjct: 69 MVADGVKTI--VIACNTATSAAVKEIRAKYQERMPIIGIEPALKPAARWKRHGRILVMAT 126 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 PATL+ +L H + V LASRVE+ + E+ +E+ G + K Sbjct: 127 PATLKLEKYEDLSHRLEGEAEFIPVMCTGLASRVEK-GKLEEEDLHELLEELLGPYRGK- 184 Query: 189 GKRTDVIVLACTHYPLIVHVFRQL 212 D IVL CTHYP + R + Sbjct: 185 ---VDGIVLGCTHYPFVKKQIRSV 205 >gi|253681134|ref|ZP_04861937.1| glutamate racemase [Clostridium botulinum D str. 1873] gi|253562983|gb|EES92429.1| glutamate racemase [Clostridium botulinum D str. 1873] Length = 257 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 7/222 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSG+GGL VL++ ++P FIY D PYG + +KK L F +L Y Sbjct: 11 FDSGVGGLSVLKEAIKILPNEDFIYYGDSKNAPYGTKKVDEVKK-LTFDAVKVLLGYNVK 69 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 V+ACNTA + ++LR+T+ M +G PA+K A + G I I++T TL + Sbjct: 70 AIVVACNTATSAAIEDLRNTYKDMPIIGIEPALKPAVELSGDGKIVIMATNMTLAEKKFN 129 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L+ Y +C I + L +E+ G K+KE ++K ++K+ + +VL Sbjct: 130 KLMSKYKDKCDIVSLPCPGLVEYIEKGIVEGKKLKEFLVEKL---SILDKD--KIASVVL 184 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 CTHYP I + V +D S A + + L + N+ Sbjct: 185 GCTHYPFIKKELYSILGDEVVIIDGSFGTANQLKRKLIKSNS 226 >gi|186476698|ref|YP_001858168.1| glutamate racemase [Burkholderia phymatum STM815] gi|184193157|gb|ACC71122.1| glutamate racemase [Burkholderia phymatum STM815] Length = 303 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 6/212 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL+ +R +P +YVAD + PYG +D + R + + ++ + Sbjct: 34 IFDSGLGGLSVLRAVRSQLPSEAIVYVADSLYAPYGERDDDFIADRTLAIGEWLIAQGAK 93 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA +R P + +G P +K AA ++S + +L+T TLR Sbjct: 94 AL-VVACNTATAQSIALVREKLP-IQLIGVEPGVKPAAQQSKSRVAGVLATRVTLRSARF 151 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L+ Y S C L VE I+ E++ + D +VL Sbjct: 152 QGLLERYASDCRFLCQPGHGLVEAVER----CDIESAELRALLVSYVQPMLDAGADTLVL 207 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 CTHYP + R ++ + +D S +IAR+ Sbjct: 208 GCTHYPFLDAAIRDIAGDRLTLIDTSVAIARQ 239 >gi|224825572|ref|ZP_03698677.1| glutamate racemase [Lutiella nitroferrum 2002] gi|224602493|gb|EEG08671.1| glutamate racemase [Lutiella nitroferrum 2002] Length = 266 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 5/221 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V +++ L+P+ IY+AD PYG + R + ++++ Sbjct: 2 IGMFDSGLGGLSVWRELTRLLPQEPVIYLADRAYCPYGGRSHEDILARSEKITRYLVEQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ VIACNTA + ELR P + +G PA+K AA +++SG I++L+T ATL+ Sbjct: 62 ARLI-VIACNTATSAAARELRRRHPELPIVGMEPAVKPAALHSRSGQIAVLATRATLKGD 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L Y I + VE + ++ ++ +E D + Sbjct: 121 KFLELKAQYDDSVDILPLPGDGFVELVENG----DLASEQAQRVVERQLQPLRAHTVDQV 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 VL CTHYP + + + P V +D + +++ +A LL R Sbjct: 177 VLGCTHYPFLSPLIERALPAGVKLIDPARAVSLQAERLLQR 217 >gi|325518393|gb|EGC98114.1| glutamate racemase [Burkholderia sp. TJI49] Length = 285 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 73/262 (27%), Positives = 108/262 (41%), Gaps = 17/262 (6%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M I + + IFDSG+GGL VL+ R +P +YVAD PYG +D + Sbjct: 1 MTIQPAASGARPAAPVGIFDSGLGGLSVLRAARAHLPHESLVYVADTRYNPYGERDDAFI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + + L V+ACNTA +R ++ +G P IK A + S Sbjct: 61 TERTLAIGEWFVQQGAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVQQSAS 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G+ +L+T ATLR L+ + + C L +E G ++ + Sbjct: 119 GVAGVLATQATLRSARFQALLERHGAGCRFICQPGHGLVQAIESGDTG----SPALRALL 174 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + D IVL CTHYP + R + V +D SD+IA Sbjct: 175 DSYLRPMLDAGADAIVLGCTHYPFLTATIRDIVGERVTIVDTSDAIA-----------LQ 223 Query: 241 QTRVFDDHALFLSGKPDIAMRR 262 RV D H L G +A R Sbjct: 224 LARVLDQHDLRAPGGAPVAPPR 245 >gi|225375887|ref|ZP_03753108.1| hypothetical protein ROSEINA2194_01523 [Roseburia inulinivorans DSM 16841] gi|225212322|gb|EEG94676.1| hypothetical protein ROSEINA2194_01523 [Roseburia inulinivorans DSM 16841] Length = 290 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 6/219 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 ++Q I +FDSG+GG+ VL+++ LMP +FI+ D PYG ++K L ++ Sbjct: 32 EMQRPIGVFDSGVGGISVLRELVALMPNENFIFYGDSKNAPYGTKTLEEVRK-LTLADAE 90 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L V+ACNTA + LR + + +G PA+K A + ++ + +++TP Sbjct: 91 YLRSRNVKALVVACNTATSAAIHILREKYQKEIPVIGIEPALKPAVSVKENSRVLVMATP 150 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TLR NL+ + Q I + L VE ++ + ++ ++ F + Sbjct: 151 MTLREKKFHNLMQKFQDQAEIISLPCPGLVEFVERG----ELSGEALEHFLKNLFAPYQE 206 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++ D +VL CTHYPL+ +++ V D AR Sbjct: 207 RKVDAVVLGCTHYPLVRKTIQKVLGSGVAVFDGGAGTAR 245 >gi|182420059|ref|ZP_02951293.1| glutamate racemase [Clostridium butyricum 5521] gi|237669542|ref|ZP_04529522.1| glutamate racemase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376096|gb|EDT73683.1| glutamate racemase [Clostridium butyricum 5521] gi|237654986|gb|EEP52546.1| glutamate racemase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 256 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 105/211 (49%), Gaps = 7/211 (3%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 ++NS I FDSG+GGL VL++ +MP ++IY D PYG E +K L F D Sbjct: 3 IKNSPIGFFDSGVGGLSVLKEAISIMPNENYIYFGDSKNAPYGTKELDEVK-HLTFNAVD 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L + V+ACNTA + +E+R+ + +G PA+K A ++G I I++TP Sbjct: 62 FLREKNVKAIVVACNTATSAAIEEIRNKHNDIPIIGIEPALKPAVKLKRNGKIIIMATPM 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR L+ Y +I M A VE GI ++ DE++K ++ F + Sbjct: 122 TLREKKFKQLMVKYQEGSNI---VPMPCAGLVEFIENGI-LEGDELEKYLKNKF-DIYFD 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 IVL CTHYP I ++ + +D Sbjct: 177 DIAAIVLGCTHYPFIKETLAKVVGSEIPLID 207 >gi|86134483|ref|ZP_01053065.1| Asp/Glu/hydantoin racemase [Polaribacter sp. MED152] gi|85821346|gb|EAQ42493.1| Asp/Glu/hydantoin racemase [Polaribacter sp. MED152] Length = 263 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 7/255 (2%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K QN I FDSGIGG + +++ L+P IY++D PYG ++ L + Sbjct: 2 KANQNPIGFFDSGIGGTSIWKEVTALLPNESTIYLSDSKNAPYGTKNKDSILD-LAIKNT 60 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + L L V+ACNTA T D LR+ + + F+G PAIK AA T++ I IL+T Sbjct: 61 EFLLNKNCKLIVVACNTATTNAIDYLRANY-KIPFIGIEPAIKPAALKTKTKRIGILATK 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TL S L S ++ + + + E KI E+++ + Sbjct: 120 GTLN----SALFEKTASTIDQQIIVKETIGTGLVELIEEGKIASKEMEQLLASYINPLVK 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 + D +VL CTHYP ++ ++++ ++ +D+ ++A++ + +L + + H H Sbjct: 176 ENIDCLVLGCTHYPYLIPAIQKITGNQLEIIDSGQAVAKQTKAILQQHDLMHNGSASAKH 235 Query: 249 ALFLSGKPDIAMRRL 263 +++ + R L Sbjct: 236 EFYINKDKSVLERIL 250 >gi|254468115|ref|ZP_05081521.1| glutamate racemase [beta proteobacterium KB13] gi|207086925|gb|EDZ64208.1| glutamate racemase [beta proteobacterium KB13] Length = 263 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 6/189 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I+IFDSG+GG +L+++ L IYVAD+ PYG ++KR+ +FS + +Y Sbjct: 8 IIIFDSGLGGTSILKEIISLNLSQQLIYVADNQYLPYGLQTKDFIEKRVCEIFSSLNQQY 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + SVIACNTA + LR F + P IK A T++ I IL+T T++ + Sbjct: 68 RIEASVIACNTATAYAANSLRGKF-KFPIVAMEPGIKPAINLTKNNNIGILATEGTIKSS 126 Query: 136 YTSNLIHSYVSQCH-IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +L+ + S H I ++ + L +E + K K D I I +++E D Sbjct: 127 RFISLVDRFTSDQHKICIIPGVGLVEEIENQSTSNK-KLDAILLPIINQLLQEEA---DT 182 Query: 195 IVLACTHYP 203 +VL CTHYP Sbjct: 183 LVLGCTHYP 191 >gi|163753921|ref|ZP_02161044.1| glutamate racemase [Kordia algicida OT-1] gi|161326135|gb|EDP97461.1| glutamate racemase [Kordia algicida OT-1] Length = 259 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 16/266 (6%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + NS I IFDSG+GG + +++ +P H IY+AD PYG + L ++ Sbjct: 1 MSNSPIGIFDSGVGGTSIWREIHKRLPSEHTIYLADSKNAPYGPKGKEKIID-LSVKNTE 59 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L K + V+ACNTA T LR + + F+G PAIK AA T+SG I IL+T Sbjct: 60 LLLKKGCKMIVVACNTATTNAIRHLRKNY-DVPFIGIEPAIKPAALQTKSGTIGILATKG 118 Query: 131 TLRRTYTSNLIHS----YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 TL +S L H Y + I L +E KI+ E++K ++ Sbjct: 119 TL----SSELFHKTSDLYANGVQIIEQVGEGLVPLIENG----KIESPEMEKLLKLYLTP 170 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D +VL C+HYP ++ + P V +D+ ++AR+ +L + + Sbjct: 171 MLHANIDYLVLGCSHYPYLIPKLQSFLPKHVKIIDSGIAVARQTEAILAKHDLSTQEETR 230 Query: 247 DHALFLS-GKPDIAMRRLMQGFGLKS 271 + +F S G P+I L F +++ Sbjct: 231 GNCIFYSNGNPEILQHILKHDFSVEA 256 >gi|237745618|ref|ZP_04576098.1| glutamate racemase [Oxalobacter formigenes HOxBLS] gi|229376969|gb|EEO27060.1| glutamate racemase [Oxalobacter formigenes HOxBLS] Length = 273 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 24/265 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P + IY AD PYG+ + + +R + L + Sbjct: 8 IGVFDSGVGGLSVLRHIRSQLPGENLIYFADSGYAPYGDKSEEFVIERAFKIAGFFLKQG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA + LR +P + +G P +K AAA T +G++ +++T RT Sbjct: 68 IKAL-VVACNTATAITIHLLREKYPELPIVGVEPGLKPAAAKTITGIVGVMAT----ERT 122 Query: 136 YTSN---LIHSYVS-QCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 SN ++H ++ Q +H + +A +E ++ + + + Sbjct: 123 LASNKFHVLHQLLNDQTGVHFIMQPCPGMADLIEHE----ELDSEPVFNLVRRYLTPILE 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRARCLLP--RINTHQTR 243 + D +VL CTHYP + HV +++ + +D ++AR+ + LL +N+ Sbjct: 179 QNADTVVLGCTHYPFVRHVIEKIAAEAGNPSLHIIDTGYAVARQLKHLLDIYGLNSKGRE 238 Query: 244 VFDDHALFLSGKPDIAMR---RLMQ 265 A F SG P R RL+Q Sbjct: 239 TDIQTAAFTSGDPQTISRLIGRLLQ 263 >gi|134299103|ref|YP_001112599.1| glutamate racemase [Desulfotomaculum reducens MI-1] gi|134051803|gb|ABO49774.1| glutamate racemase [Desulfotomaculum reducens MI-1] Length = 282 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 6/223 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + +R L+P IY AD PYG+ + +++R + + L Sbjct: 21 IGVFDSGVGGLSVARDIRKLLPLEDIIYYADSAYCPYGDKDPQTIRQREKAI-GEFLVSQ 79 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA + + LR F + +G P +K A A T++G I +L+T T+ Sbjct: 80 GCKLIVVACNTASSAGLEYLRR-FLKVPVVGMEPGVKPAVAATRNGKIGVLATCVTIAGD 138 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 S+L+ Y + + L +E E++++ ++ K+ D I Sbjct: 139 RFSSLVKRYAEETEVITQPCPGLVELIESGKLNAPETEEKLRTFLQPIL----DKKADTI 194 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 VL CTHYP + + L+ V +D ++A++ +L N Sbjct: 195 VLGCTHYPFLRPMLESLAGPGVSVIDTGQAVAKQVSRVLSACN 237 >gi|213029822|ref|ZP_03344269.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 208 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 3/167 (1%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+ Sbjct: 1 MTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLA 59 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++R YT LI + ++C I ++ S L E G + +E+++ + Sbjct: 60 TRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMP 119 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 E D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 120 EPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 164 >gi|32490882|ref|NP_871136.1| hypothetical protein WGLp133 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|81741819|sp|Q8D368|MURI_WIGBR RecName: Full=Glutamate racemase gi|25166088|dbj|BAC24279.1| murI [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 268 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 5/226 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + KLQ ILIFDSGIGGL ++R +P ++IYV D+ GFPYGN + + R+ + Sbjct: 2 KNKLQ--ILIFDSGIGGLYFYSEIRKYIPHANYIYVLDNEGFPYGNKYKNFIFDRVTNII 59 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + + Y+ L+++ACNTA ++ L+ F S +G P I ++ T++ +I +L+T Sbjct: 60 IYMHNLYKFDLTIVACNTASSIALSYLKKFFIS-PVIGIKPDINESVNITKNNIIGLLAT 118 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ ++ +++ + + + L EE G I ++IK ++ + K Sbjct: 119 KITINYVLSNFFNFKSLNKIKLITLDANELIKLSEEKMRGKIIHLNKIKNILKPILLNKN 178 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D I+L CTH + F+++ P ++D+ + ++ L+ Sbjct: 179 --IPDTIILGCTHLLFFYYEFKKIFPIGTKFIDSKKILLNKSIMLI 222 >gi|182624295|ref|ZP_02952080.1| glutamate racemase [Clostridium perfringens D str. JGS1721] gi|177910513|gb|EDT72886.1| glutamate racemase [Clostridium perfringens D str. JGS1721] Length = 260 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 12/231 (5%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F + Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRS-LSFNAIE 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L K VIACNTA + +LR + + +G PA+K A ++G + +++T A Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187 TL + NL+ Y V S+ VE G ++ +++K +E ++++ Sbjct: 124 TLNQEKFKNLMDKYGEHRE---VISLPCPGLVEFIEAG-DLEGEDVKNFLREKLNPYMDR 179 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 E IVL CTHYP + V + + VD +D S R + L N Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENN 227 >gi|239502810|ref|ZP_04662120.1| putative glutamate racemase [Acinetobacter baumannii AB900] Length = 266 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 5/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ Sbjct: 8 IGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLISNLVAHG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNT + + +R+ ++ + PA+K A A T S I +L+T T++ Sbjct: 68 KCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAMTVSKHIEVLATATTVKGK 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +LI +Y + LV + LA ++E K E+K ++ ++ D I Sbjct: 127 NLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKVDTI 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +L CTHYP + + +++ + ++ S+++ + Sbjct: 183 ILGCTHYPFVSDMIQEIVGRDIQIIEPSEAVTAQ 216 >gi|153937979|ref|YP_001392916.1| glutamate racemase [Clostridium botulinum F str. Langeland] gi|166231035|sp|A7GJF6|MURI_CLOBL RecName: Full=Glutamate racemase gi|152933875|gb|ABS39373.1| glutamate racemase [Clostridium botulinum F str. Langeland] gi|295320892|gb|ADG01270.1| glutamate racemase [Clostridium botulinum F str. 230613] Length = 257 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 6/223 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMNK 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELNKGGKIIIMATPMTLAEK 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL+ Y I + L +E+ GI + D I ++ F + + ++ I Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 VL CTHYP I ++++ +D S +R + L N Sbjct: 182 VLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSN 224 >gi|154250720|ref|YP_001411544.1| glutamate racemase [Parvibaculum lavamentivorans DS-1] gi|154154670|gb|ABS61887.1| glutamate racemase [Parvibaculum lavamentivorans DS-1] Length = 276 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 4/244 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + +I +FDSGIGG+ VL+ +R +P +Y+ D PYG + Sbjct: 4 KSERAIGVFDSGIGGITVLKALRAALPHEDLVYLGDTARLPYGTKSPETVTAYATQATKH 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +++ + + VIACNTA + L + +G + P K A T+SG I ++ T Sbjct: 64 LME-HGVKMVVIACNTASAVAIGPLTEALKPLPVIGVIEPGAKAGVAATKSGRIGVIGTE 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+R IH+ + + + + EE ++ E K+ + F K Sbjct: 123 ATVRGGAYMRAIHALDPKAQVTQAPCGLFVTLAEEGWTSGEVAEAAAKRYLAPLF--KGR 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D +VL CTH+P++ + +++ V +D++ + A+ L R Sbjct: 181 NAPDTLVLGCTHFPVLARIIKKVVGKNVKLVDSAATTAKAVEAALAEQGLASRRRGKGKT 240 Query: 250 LFLS 253 FL+ Sbjct: 241 RFLA 244 >gi|322807887|emb|CBZ05462.1| glutamate racemase [Clostridium botulinum H04402 065] Length = 257 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 6/223 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMSK 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 67 GVKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL+ Y I + L +E+ GI + D I ++ F + + ++ I Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 VL CTHYP I ++++ +D S +R + L N Sbjct: 182 VLGCTHYPFIEETLKEITHNKACIIDGSFGTSRELKRQLKNSN 224 >gi|170758321|ref|YP_001788902.1| glutamate racemase [Clostridium botulinum A3 str. Loch Maree] gi|229486237|sp|B1KTG4|MURI_CLOBM RecName: Full=Glutamate racemase gi|169405310|gb|ACA53721.1| glutamate racemase [Clostridium botulinum A3 str. Loch Maree] Length = 257 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 6/223 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KTLTFNATDFLMNK 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL+ Y I + L +E+ GI + D I ++ F + + ++ I Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 VL CTHYP I ++++ +D S +R + L N Sbjct: 182 VLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSN 224 >gi|226324711|ref|ZP_03800229.1| hypothetical protein COPCOM_02497 [Coprococcus comes ATCC 27758] gi|225207159|gb|EEG89513.1| hypothetical protein COPCOM_02497 [Coprococcus comes ATCC 27758] Length = 260 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 24/258 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK----KRLMFLFSDI 71 I I+DSGIGGL VL + MPE FIY AD PYG +K + L FL + Sbjct: 3 IGIYDSGIGGLSVLHRALKKMPEAEFIYYADTKHVPYGEKTREQIKGYVEEVLNFLIAKE 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STP 129 +D VIACNTA ++ E R F ++ +G PA+K+A Q IL +TP Sbjct: 63 VDAI-----VIACNTATSVATKEFRGEF-AVPIVGMEPAVKRALKLYQDMQKRILVTATP 116 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ +HS + + + ++ +A + ++ E+ K ++ Sbjct: 117 VTI----AGEKLHSLLEKVDTEHEVDLAPLPKLVRFAEAGRFQDPEVDKYLKNSLQSYTL 172 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDD 247 + +VL CTH+ FR++ P + ++D ++ R+ R +LP T ++V Sbjct: 173 NQYAAVVLGCTHFNYFKQSFRKIFPGEIHFVDGNEGTLRQLRRVLPEQTTPGEPSKV--- 229 Query: 248 HALFLSGKP--DIAMRRL 263 + SG+P D M+++ Sbjct: 230 -TYYFSGEPADDEGMKKI 246 >gi|219850108|ref|YP_002464541.1| glutamate racemase [Chloroflexus aggregans DSM 9485] gi|219544367|gb|ACL26105.1| glutamate racemase [Chloroflexus aggregans DSM 9485] Length = 266 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 10/253 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+AD PYG ++ R + ++++ Sbjct: 2 IGIFDSGLGGLTVTRAIHERLPTADLLYLADSAYCPYGPRPVEEIRARALACGQWLVEQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA + LRST P + +G P +K A A T+ G +++++T TL Sbjct: 62 AQIV-VVACNTATAAAIEVLRSTLP-VPVVGMEPGVKPAVAATRRGKVAVMATSGTLASD 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI++Y ++ ++ ++ L +VE A DE K + + DVI Sbjct: 120 RFRALINAYAAEVEVYALACPDLVEQVEAGAIA-----DEYTKTLIANHLAAA-ADADVI 173 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+P + + R + V +D ++A + + RI R F +G Sbjct: 174 VLGCTHFPPLTPLIRACAGPEVTIIDTGPAVAAQTARIAERIGLP--RGEGTLRCFTTGD 231 Query: 256 PDIAMRRLMQGFG 268 P+ + L+ +G Sbjct: 232 PEAIAQALVHVWG 244 >gi|91774979|ref|YP_544735.1| glutamate racemase [Methylobacillus flagellatus KT] gi|91708966|gb|ABE48894.1| glutamate racemase [Methylobacillus flagellatus KT] Length = 270 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 6/215 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL VL+ ++ +P H +YVAD + PYG + +R + +++ Sbjct: 12 AIGVFDSGVGGLSVLRHIQQQLPHEHLLYVADSLNAPYGPKPQAFIIERSRNIAQFLIES 71 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V+ACNTA LR+ + +G PA+K AAA T+SG++ +L+T TL+ Sbjct: 72 GAKAI-VVACNTATAAAIRILRNEL-DIPVIGMEPAVKPAAAATRSGVVGVLATTGTLKS 129 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + L+ Y HI +V+ + VE G ++ + + G + D Sbjct: 130 AQFAALLEHYGK--HIKVVAQACV-GLVECIERG-ELDTPSTRALVAGYVAPLMEEGADT 185 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 IVL CTHYP I + ++ V +D ++AR+ Sbjct: 186 IVLGCTHYPFIKPLIADIAGPDVVLIDTGAAVARQ 220 >gi|319789116|ref|YP_004150749.1| glutamate racemase [Thermovibrio ammonificans HB-1] gi|317113618|gb|ADU96108.1| glutamate racemase [Thermovibrio ammonificans HB-1] Length = 262 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 10/222 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R L+P+ + IY D PYG + K + +L+ Y Sbjct: 6 IGVFDSGVGGLTVLKALRELLPDENLIYFGDTARVPYGTKSPKTIIK-FSIQNTKLLESY 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 + V+ACNT+ + L+ FP +G V P K+A T + + ++ T AT++ Sbjct: 65 GVKMVVVACNTSSAHALEILQEEFP-FPVVGVVEPGAKEAVKSTDNRRVGVIGTEATVKS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEGKRTD 193 I S C + + + +EE +D + E+ ++ E + D Sbjct: 124 EAYRKAIVSLDPFCTVFQKACPLFVPLIEEGWL-----KDPVTLEVARRYLGEFKEFNVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 +VL CTHYPLI V ++ P + +D+++++AR + LLP Sbjct: 179 TLVLGCTHYPLIKEVIGEVLPG-IRLVDSAEAVAREVKRLLP 219 >gi|317050732|ref|YP_004111848.1| glutamate racemase [Desulfurispirillum indicum S5] gi|316945816|gb|ADU65292.1| glutamate racemase [Desulfurispirillum indicum S5] Length = 260 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 9/216 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GG+ VL+ +R +P + +Y+ D PYG + R D L Sbjct: 2 KTIGIFDSGVGGITVLKAIRRALPTFDILYLGDTARVPYGTKSRETV-LRYSLQVGDFLY 60 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA E+R+ + + +G + P + A ++SG I+++ T AT+ Sbjct: 61 RKGIDLLVIACNTATAYGLHEIRARY-DIPVIGVIEPGAQATVALSRSGRIAVIGTSATV 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + I Y+ + ++ +L VEE CG + +++ ++ + + Sbjct: 120 QSGQYRSTIQHYLPDADVREIACPMLVPLVEENWCGTDVAHLILQR-----YLGQLRGQV 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYP++ ++ P V +D+++ AR Sbjct: 175 DTLVLGCTHYPMLKEDIARVLPG-VTQVDSAEETAR 209 >gi|170755805|ref|YP_001783201.1| glutamate racemase [Clostridium botulinum B1 str. Okra] gi|229486236|sp|B1IH18|MURI_CLOBK RecName: Full=Glutamate racemase gi|169121017|gb|ACA44853.1| glutamate racemase [Clostridium botulinum B1 str. Okra] Length = 257 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 8/231 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMNK 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL+ Y I + L +E+ GI + D I ++ F + + ++ I Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRV 244 VL CTHYP I ++++ +D S +R + L N + RV Sbjct: 182 VLGCTHYPFIEKTLKEVTYNKACIIDGSFGTSRELKRQLKNSNMLREENRV 232 >gi|193213389|ref|YP_001999342.1| glutamate racemase [Chlorobaculum parvum NCIB 8327] gi|229486233|sp|B3QQD9|MURI_CHLP8 RecName: Full=Glutamate racemase gi|193086866|gb|ACF12142.1| glutamate racemase [Chlorobaculum parvum NCIB 8327] Length = 272 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 22/232 (9%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSGIGGL VL+ ++ +P +Y D PYG ++K +++L Sbjct: 10 SPIGIFDSGIGGLTVLKAVQAALPSERLLYFGDTARVPYGTKSQVTIRKYARE-DTELLM 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATL 132 K+QP L ++ACNT L D + T + +G + A + AA+ T+SG I ++ T AT Sbjct: 69 KHQPKLIIVACNTVSALALDVVEQTAGDILVIGVLKAGAELAAHRTKSGRIGVIGTQAT- 127 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEKE-- 188 I S C I + A V AC + + E+ + +E Sbjct: 128 --------IGSNAYSCAIREEND---ALEVTPKACPLFVPLAEEGFIDHPATRLVAEEYL 176 Query: 189 ----GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 GK D +VL CTHYP++ V ++ + +D+++++A +A+ LL + Sbjct: 177 SAFTGKEIDTLVLGCTHYPILRKVIESIAGPQITIIDSAEAVASKAKELLSK 228 >gi|134094154|ref|YP_001099229.1| glutamate racemase [Herminiimonas arsenicoxydans] gi|133738057|emb|CAL61102.1| Glutamate racemase [Herminiimonas arsenicoxydans] Length = 284 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 35/252 (13%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M P + I IFDSG+G L VL+ ++ +P H + AD PYG D + Sbjct: 1 MSFSATPDPVAAEAPIGIFDSGVGALSVLRHIQARLPSEHLLCFADSGYAPYGGKPDAEI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + +L K + V+ACNTA D LR +P + +G P +K AA +++S Sbjct: 61 VERTLAIAAFLLTKKVKAI-VVACNTATAAAIDALRQQYPDLIVVGVEPGLKPAAVFSKS 119 Query: 121 GLISILSTPAT--------LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 G +L+T +T LR ++++Q + LV +I+ Sbjct: 120 GKAGVLATASTLASHRFIALRDQIAETTGVTFLTQACVGLVE---------------QIE 164 Query: 173 EDEIKKEIEGCFIEK------EGKRTDVIVLACTHY----PLIVHVFRQLSPWPVDWLDN 222 + E+ +E+ G D + L CTHY PLI + + S PV +D Sbjct: 165 KGELSSPETAAMLERYVTPLLRGG-ADTLALGCTHYPFVQPLIEAIAERESAVPVTIIDT 223 Query: 223 SDSIARRARCLL 234 ++++R+ LL Sbjct: 224 GEAVSRQLERLL 235 >gi|254185304|ref|ZP_04891892.1| glutamate racemase [Burkholderia pseudomallei 1655] gi|184209539|gb|EDU06582.1| glutamate racemase [Burkholderia pseudomallei 1655] Length = 290 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 17/244 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ Sbjct: 15 RAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 74 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL Sbjct: 75 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ + + C L +E G + +E + G Sbjct: 133 RSARFEALLARHAADCRFLCQPGRGLVEAIERGDTGSPALRTLLASYLEPML--EAG--A 188 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP + R ++ + +D D+IAR RV D+ L Sbjct: 189 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 237 Query: 253 SGKP 256 P Sbjct: 238 PASP 241 >gi|168181031|ref|ZP_02615695.1| glutamate racemase [Clostridium botulinum NCTC 2916] gi|182668118|gb|EDT80097.1| glutamate racemase [Clostridium botulinum NCTC 2916] Length = 257 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 6/223 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMNK 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL+ Y I + L +E+ GI + D I ++ F + + ++ I Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDIIYNYLKDKFSKYDNEKISSI 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 VL CTHYP I ++++ +D S +R + L N Sbjct: 182 VLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSN 224 >gi|238750876|ref|ZP_04612374.1| Glutamate racemase [Yersinia rohdei ATCC 43380] gi|238711020|gb|EEQ03240.1| Glutamate racemase [Yersinia rohdei ATCC 43380] Length = 211 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 4/208 (1%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 M + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ Sbjct: 1 MEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNGVVG 59 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+T T+ +YT +LI + + C I L+ S L E G + + +KK + Sbjct: 60 LLATRGTVHASYTLDLIERFATDCKIELLGSSDLVELAETKLHGGTVPTEALKKILHPWL 119 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + Sbjct: 120 MMREPP--DTIVLGCTHFPLLAAELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSST 177 Query: 245 FDDHALFLSGKPDI-AMRRLMQGFGLKS 271 ++ A ++ D A+ ++QG+G + Sbjct: 178 DENIAYCMALNADTDALLPVLQGYGFPT 205 >gi|256821416|ref|YP_003145379.1| glutamate racemase [Kangiella koreensis DSM 16069] gi|256794955|gb|ACV25611.1| glutamate racemase [Kangiella koreensis DSM 16069] Length = 272 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 22/210 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL +L+ +R +P + +YVAD PYG L KR + + +++ Sbjct: 6 IGVFDSGVGGLSILKSIREHLPNENLLYVADSAYAPYGRLPKDILHKRCTHIANFFVEQG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA ++ + LRS F + + PAIK AA T++G I + +T TL+ Sbjct: 66 AKAM-VIACNTATAVMAEWLRSEF-DIPIIAMEPAIKPAAHATRTGKIGVFATNHTLKSD 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK--------KEIEGCFIEK 187 L+ Y +V E AC +++ E + +E Sbjct: 124 RYKKLLTEYAKD------------KKVFESACDGFVEQVETGDLSSVKAFQLVEKYLQPM 171 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217 + DV+VL CTHYP + + RQ+S V Sbjct: 172 IDEHIDVLVLGCTHYPFLAPLMRQISSQQV 201 >gi|110801992|ref|YP_699819.1| glutamate racemase [Clostridium perfringens SM101] gi|168213495|ref|ZP_02639120.1| glutamate racemase [Clostridium perfringens CPE str. F4969] gi|123145852|sp|Q0SPY8|MURI_CLOPS RecName: Full=Glutamate racemase gi|110682493|gb|ABG85863.1| glutamate racemase [Clostridium perfringens SM101] gi|170715052|gb|EDT27234.1| glutamate racemase [Clostridium perfringens CPE str. F4969] Length = 260 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 12/233 (5%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F + Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRS-LSFNAIE 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L K VIACNTA + +LR + + +G PA+K A ++G + +++T A Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187 TL + NL+ Y + + L +E ++ +E+K +E ++++ Sbjct: 124 TLTQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGNLEGEEVKNFLREKLNPYMDR 179 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E IVL CTHYP + V + + VD +D S R + L N Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTIRELKRRLEENNMQ 229 >gi|257467248|ref|ZP_05631559.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563] gi|315918376|ref|ZP_07914616.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563] gi|313692251|gb|EFS29086.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563] Length = 261 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 24/233 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I +FDSGIGGL VL + ++P+ +FIY AD PYG K+ ++ S+ +D Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADVDHVPYGT----KTKEEIIKYTSEAVDFL 58 Query: 74 -KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA + ELR + S+ +G PA+K+A + + +++TP T+ Sbjct: 59 VKEGVKAIVIACNTATSAAIQELRERY-SLPIIGMEPAVKKAIDFHPEKRVLVIATPMTV 117 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI-KKEIEGCFIEKEGKR 191 + NLI ++ HLV ++ L V E+EI + E+ ++++E K+ Sbjct: 118 QGEKLHNLIEKVDTE---HLVDAIALPKLV-------TFAEEEIFEDEVISAYLQEEFKQ 167 Query: 192 TDV-----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 ++ IVL CTH+ ++L P V +LD ++ ++ L IN Sbjct: 168 LNLEDYSSIVLGCTHFNYFKESLKKLLPKGVKFLDGNEGTIKKLISELENINA 220 >gi|257451947|ref|ZP_05617246.1| glutamate racemase [Fusobacterium sp. 3_1_5R] gi|317058497|ref|ZP_07922982.1| glutamate racemase [Fusobacterium sp. 3_1_5R] gi|313684173|gb|EFS21008.1| glutamate racemase [Fusobacterium sp. 3_1_5R] Length = 261 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 118/232 (50%), Gaps = 22/232 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I +FDSGIGGL VL + ++P+ +FIY AD PYG K+ ++ S+ +D Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADVDHVPYGT----KTKEEIIKYTSEAVDFL 58 Query: 74 -KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA + ELR + S+ +G PA+K+A + + +++TP T+ Sbjct: 59 VKEGVKAIVIACNTATSAAIQELRERY-SLPIIGMEPAVKKAIDFHPEKRVLVIATPMTV 117 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + NLI ++ HLV ++ L V +A +E+ + E+ ++++E K+ Sbjct: 118 QGEKLHNLIEKVDTE---HLVDAIALPKLV-TFA-----EEEMFEDEVVSAYLQEEFKQL 168 Query: 193 DV-----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 ++ IVL CTH+ ++L P V +LD ++ ++ L IN Sbjct: 169 NLEDYSSIVLGCTHFNYFKESLKKLLPKGVKFLDGNEGTIKKLISELENINA 220 >gi|113868495|ref|YP_726984.1| glutamate racemase [Ralstonia eutropha H16] gi|113527271|emb|CAJ93616.1| glutamate racemase [Ralstonia eutropha H16] Length = 269 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 13/252 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++R L+P +Y+AD PYG + ++ R + ++ + Sbjct: 6 IGVFDSGLGGLSVLREIRALLPHESVLYLADSKYAPYGEKPEKFVEARTLQACEWLIAQG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA + LR P + +G P +K AAA ++S ++ +L+T TL+ Sbjct: 66 CKAL-VIACNTATGHAVELLRKQLP-LPIIGVEPGLKPAAAASRSKVVGVLATANTLKSA 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ S + + + L S +E+ I +++ ++ D + Sbjct: 124 KFARLLASLDGESRFICEAGLGLVSLIEQG----DIDGPAVRERLDTYLTPMLEAGADTL 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---HALFL 252 VL CTHYP + R + + +D +IAR+ L ++ H+ D H F Sbjct: 180 VLGCTHYPFLSGTIRAMVGDQLALVDTGSAIARQ---LARKLAEHKLAAAPDATPHDRFA 236 Query: 253 SGKPDIAMRRLM 264 S K D A R M Sbjct: 237 STK-DAAHLRAM 247 >gi|254264436|ref|ZP_04955301.1| glutamate racemase [Burkholderia pseudomallei 1710a] gi|254215438|gb|EET04823.1| glutamate racemase [Burkholderia pseudomallei 1710a] Length = 302 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 17/244 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ Sbjct: 27 RAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 86 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL Sbjct: 87 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 144 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ + + C L +E G + +E + G Sbjct: 145 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--A 200 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP + R ++ + +D D+IAR RV D+ L Sbjct: 201 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 249 Query: 253 SGKP 256 P Sbjct: 250 PASP 253 >gi|194334596|ref|YP_002016456.1| glutamate racemase [Prosthecochloris aestuarii DSM 271] gi|229486246|sp|B4S417|MURI_PROA2 RecName: Full=Glutamate racemase gi|194312414|gb|ACF46809.1| glutamate racemase [Prosthecochloris aestuarii DSM 271] Length = 269 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 16/228 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ + IFDSGIGGL V++ M+ ++P IY D PYG+ ++K + D L Sbjct: 5 ESPVGIFDSGIGGLTVVRAMQAMLPAEQIIYFGDTARVPYGSKSQVTIRK---YAHEDTL 61 Query: 73 D--KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTP 129 KYQP + +IACNT L D + ST + LG + A + A T +G I ++ T Sbjct: 62 TLMKYQPKMIIIACNTVSALGLDVVESTGKGVTVLGVLKAGAELAVRETLNGRIGVIGTQ 121 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC---GIKIKEDEIKKEIEGCFIE 186 AT+ + I + + + + + EE K+ +E E+ C I Sbjct: 122 ATICSNAYACEITALAPEIQVFSKACPLFVPLAEEGFINHPASKLIAEEYLDELLCCNI- 180 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYP++ + ++++ + +D+++++A AR LL Sbjct: 181 ------DTLVLGCTHYPILKTMIQEITGPDIRIIDSAEAVAAGARTLL 222 >gi|126442693|ref|YP_001061621.1| glutamate racemase [Burkholderia pseudomallei 668] gi|126222184|gb|ABN85689.1| glutamate racemase [Burkholderia pseudomallei 668] Length = 290 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 17/241 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ + Sbjct: 18 IGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLVAQG 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRSA 135 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ + + C L +E G + +E + G D + Sbjct: 136 RFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRTLLASYLEPML--EAG--ADTL 191 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYP + R ++ + +D D+IAR RV D+ L Sbjct: 192 VLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRAPAS 240 Query: 256 P 256 P Sbjct: 241 P 241 >gi|126458024|ref|YP_001074561.1| glutamate racemase [Burkholderia pseudomallei 1106a] gi|167722449|ref|ZP_02405685.1| glutamate racemase [Burkholderia pseudomallei DM98] gi|167826991|ref|ZP_02458462.1| glutamate racemase [Burkholderia pseudomallei 9] gi|167848505|ref|ZP_02474013.1| glutamate racemase [Burkholderia pseudomallei B7210] gi|167897057|ref|ZP_02484459.1| glutamate racemase [Burkholderia pseudomallei 7894] gi|167905441|ref|ZP_02492646.1| glutamate racemase [Burkholderia pseudomallei NCTC 13177] gi|167913734|ref|ZP_02500825.1| glutamate racemase [Burkholderia pseudomallei 112] gi|167921675|ref|ZP_02508766.1| glutamate racemase [Burkholderia pseudomallei BCC215] gi|217424462|ref|ZP_03455960.1| glutamate racemase [Burkholderia pseudomallei 576] gi|226199169|ref|ZP_03794730.1| glutamate racemase [Burkholderia pseudomallei Pakistan 9] gi|242313204|ref|ZP_04812221.1| glutamate racemase [Burkholderia pseudomallei 1106b] gi|254198957|ref|ZP_04905375.1| glutamate racemase [Burkholderia pseudomallei S13] gi|254296816|ref|ZP_04964270.1| glutamate racemase [Burkholderia pseudomallei 406e] gi|126231792|gb|ABN95205.1| glutamate racemase [Burkholderia pseudomallei 1106a] gi|157806660|gb|EDO83830.1| glutamate racemase [Burkholderia pseudomallei 406e] gi|169657129|gb|EDS88523.1| glutamate racemase [Burkholderia pseudomallei S13] gi|217392386|gb|EEC32410.1| glutamate racemase [Burkholderia pseudomallei 576] gi|225928768|gb|EEH24794.1| glutamate racemase [Burkholderia pseudomallei Pakistan 9] gi|242136443|gb|EES22846.1| glutamate racemase [Burkholderia pseudomallei 1106b] Length = 290 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 17/241 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ + Sbjct: 18 IGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLVAQG 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRSA 135 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ + + C L +E G + +E + G D + Sbjct: 136 RFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--ADTL 191 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYP + R ++ + +D D+IAR RV D+ L Sbjct: 192 VLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRAPAS 240 Query: 256 P 256 P Sbjct: 241 P 241 >gi|76818560|ref|YP_337086.1| glutamate racemase [Burkholderia pseudomallei 1710b] gi|254187190|ref|ZP_04893704.1| glutamate racemase [Burkholderia pseudomallei Pasteur 52237] gi|76583033|gb|ABA52507.1| glutamate racemase [Burkholderia pseudomallei 1710b] gi|157934872|gb|EDO90542.1| glutamate racemase [Burkholderia pseudomallei Pasteur 52237] Length = 290 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 17/244 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ Sbjct: 15 RAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 74 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL Sbjct: 75 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ + + C L +E G + +E + G Sbjct: 133 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--A 188 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP + R ++ + +D D+IAR RV D+ L Sbjct: 189 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 237 Query: 253 SGKP 256 P Sbjct: 238 PASP 241 >gi|168183642|ref|ZP_02618306.1| glutamate racemase [Clostridium botulinum Bf] gi|237797023|ref|YP_002864575.1| glutamate racemase [Clostridium botulinum Ba4 str. 657] gi|259509811|sp|C3KWB8|MURI_CLOB6 RecName: Full=Glutamate racemase gi|182673216|gb|EDT85177.1| glutamate racemase [Clostridium botulinum Bf] gi|229262938|gb|ACQ53971.1| glutamate racemase [Clostridium botulinum Ba4 str. 657] Length = 257 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 6/223 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNTPYGTKKVEEV-KALTFNATDFLMSK 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL+ Y I + L +E+ GI + D I ++ F + + ++ I Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDDEKISSI 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 VL CTHYP + ++++ +D S +R + L N Sbjct: 182 VLGCTHYPFVEETLKEVTHNKACIIDGSFGTSRELKRQLKNSN 224 >gi|331270559|ref|YP_004397051.1| glutamate racemase [Clostridium botulinum BKT015925] gi|329127109|gb|AEB77054.1| glutamate racemase [Clostridium botulinum BKT015925] Length = 257 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 5/221 (2%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSG+GGL VL++ ++P FIY D PYG + +KK L F +L Y Sbjct: 11 FDSGVGGLSVLKEAIKILPNEDFIYFGDSKNAPYGTKKVDEVKK-LTFDAVKMLLDYNVK 69 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 V+ACNTA + ++LR+T+ + +G PA+K A +Q G I I++T TL + Sbjct: 70 AIVVACNTATSAAIEDLRNTYKDIPIIGIEPALKPAVELSQDGKIVIMATNMTLAEKKFN 129 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 L+ Y + I S+ VE GI ++ E+ + + G + + +VL Sbjct: 130 KLMSKYKDEYDI---VSLPCPGLVEYIEKGI-VQGKELNEFLSGRLSILDKDKIASVVLG 185 Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 CTHYP + + V +D S A + + L + N+ Sbjct: 186 CTHYPFVKKELSNILGDEVVIIDGSFGTASQLKRKLIKNNS 226 >gi|110800511|ref|YP_697257.1| glutamate racemase [Clostridium perfringens ATCC 13124] gi|168209809|ref|ZP_02635434.1| glutamate racemase [Clostridium perfringens B str. ATCC 3626] gi|123049548|sp|Q0TM83|MURI_CLOP1 RecName: Full=Glutamate racemase gi|110675158|gb|ABG84145.1| glutamate racemase [Clostridium perfringens ATCC 13124] gi|170712130|gb|EDT24312.1| glutamate racemase [Clostridium perfringens B str. ATCC 3626] Length = 260 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F + Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRS-LSFNAIE 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L K VIACNTA + +LR + + +G PA+K A ++G + +++T A Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187 TL + NL+ Y + + L +E ++ +++K +E ++++ Sbjct: 124 TLNQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDR 179 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 E IVL CTHYP + V + + VD +D S R + L N Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENN 227 >gi|315648405|ref|ZP_07901504.1| glutamate racemase [Paenibacillus vortex V453] gi|315276099|gb|EFU39445.1| glutamate racemase [Paenibacillus vortex V453] Length = 267 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 112/243 (46%), Gaps = 22/243 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GGL VL +P+ F++ AD + PYG +K + I+ + Sbjct: 3 IAFFDSGLGGLTVLSAAMRELPQEDFLFFADTLHVPYGTKAKEDVKSYIHDAIKTIMQEE 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133 + VIACNTA ++ ELR T+P + +G PA+K A +S I + +TP TLR Sbjct: 63 VKAI-VIACNTATSMAISELRRTYP-IPIIGMEPAVKPAVEINRSSGKRILVFATPLTLR 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI----KIKEDEIKKEIEGCFIEKEG 189 + +L+ S +H+V S+ L V EY + KI ++++G + + G Sbjct: 121 ESKYRDLVRRVDS---MHIVDSLPLPELV-EYCEALNFDQKIMNAYFTEKLDGFDLNEYG 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR------RARCLLPRINTHQTR 243 +VL CTHYP + L P + +D S RA LL T R Sbjct: 177 ----TVVLGCTHYPFYKKILSDLLPEHIQIIDGSTGTVNRLIQVLRANDLLSSSGTQDVR 232 Query: 244 VFD 246 + + Sbjct: 233 LLN 235 >gi|50086249|ref|YP_047759.1| glutamate racemase [Acinetobacter sp. ADP1] gi|49532225|emb|CAG69937.1| glutamate racemase [Acinetobacter sp. ADP1] Length = 292 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 13/225 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL + Q++ +P +Y AD PYG DH +++ L + L + Sbjct: 23 IGIFDSGIGGLSIAQEIANYLPNEQIVYYADTAFVPYGPRPDHEIRQ-LTARGIEWLYRQ 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++V+ACNTA D LR + S +G VPA+K A +QS ++++L+TPAT R Sbjct: 82 GCKMAVVACNTASAFSLDGLREHYGESFPIVGLVPALKPAVLQSQSKVVAVLATPATFRG 141 Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEGK 190 ++I+ + S + V+ + L +E G ++ + ++ ++I I++ Sbjct: 142 QLIKDVIYHFALPSGVQVLPVTCLELVPLIE---AGQQMSQPCLDLLRQILTPVIDQGA- 197 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 D +VL CTHYP + L + +D+ +AR+ AR L+ Sbjct: 198 --DYLVLGCTHYPFLKDAIHYLFGNRLTLIDSGAPVARQTARILI 240 >gi|134283052|ref|ZP_01769754.1| glutamate racemase [Burkholderia pseudomallei 305] gi|237509359|ref|ZP_04522074.1| glutamate racemase [Burkholderia pseudomallei MSHR346] gi|134245700|gb|EBA45792.1| glutamate racemase [Burkholderia pseudomallei 305] gi|235001564|gb|EEP50988.1| glutamate racemase [Burkholderia pseudomallei MSHR346] Length = 290 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 17/241 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ + Sbjct: 18 IGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLVAQG 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRSA 135 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ + + C L +E G + +E + G D + Sbjct: 136 RFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--ADTL 191 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYP + R ++ + +D D+IAR RV D+ L Sbjct: 192 VLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRAPAS 240 Query: 256 P 256 P Sbjct: 241 P 241 >gi|53721405|ref|YP_110390.1| glutamate racemase [Burkholderia pseudomallei K96243] gi|167818613|ref|ZP_02450293.1| glutamate racemase [Burkholderia pseudomallei 91] gi|52211819|emb|CAH37818.1| putative glutamate racemase [Burkholderia pseudomallei K96243] Length = 290 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 17/244 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ Sbjct: 15 RAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 74 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL Sbjct: 75 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ + + C L +E G + +E + G Sbjct: 133 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--A 188 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP + R ++ + +D D+IAR RV D+ L Sbjct: 189 DTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 237 Query: 253 SGKP 256 P Sbjct: 238 PASP 241 >gi|237744604|ref|ZP_04575085.1| glutamate racemase [Fusobacterium sp. 7_1] gi|256027373|ref|ZP_05441207.1| glutamate racemase [Fusobacterium sp. D11] gi|260494464|ref|ZP_05814594.1| glutamate racemase [Fusobacterium sp. 3_1_33] gi|289765339|ref|ZP_06524717.1| glutamate racemase [Fusobacterium sp. D11] gi|229431833|gb|EEO42045.1| glutamate racemase [Fusobacterium sp. 7_1] gi|260197626|gb|EEW95143.1| glutamate racemase [Fusobacterium sp. 3_1_33] gi|289716894|gb|EFD80906.1| glutamate racemase [Fusobacterium sp. D11] Length = 264 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 9/224 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D K Sbjct: 8 IGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFVKN 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T Sbjct: 68 NCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKNTKNKNIAVISTKFTAES 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 N S+ ++ ++ + A +E G ++ +KE+ ++ + K TD Sbjct: 127 HGYKNKAKMLDSELNVKEIACIEFAQMIE---SGWDTFDN--RKELLNKYLSEIPKNTDT 181 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +VL CTHYPLI + + V +D + I RA L +N Sbjct: 182 LVLGCTHYPLIRKDIEKNTKIKV--VDPAVEIVERATQTLTSLN 223 >gi|170694655|ref|ZP_02885807.1| glutamate racemase [Burkholderia graminis C4D1M] gi|170140537|gb|EDT08713.1| glutamate racemase [Burkholderia graminis C4D1M] Length = 295 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 14/216 (6%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L + Sbjct: 25 IFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFIADRTLAI-GEWLARQGA 83 Query: 78 VLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ACNTA L++++L S+ +G P IK AA +++ + +L+T TLR Sbjct: 84 KALIVACNTATAQSIALVREKL-----SIPLVGVEPGIKPAALQSKTRVAGVLATQVTLR 138 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L+ Y + C L VE G E++ + D Sbjct: 139 SARFQALLERYAADCRFICQPGHGLVQAVERCDVG----STELRALLASYLEPMLAAGAD 194 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +VL CTHYP + R + + +D S +IAR+ Sbjct: 195 TLVLGCTHYPFLDAAIRDIVGDRMALIDTSVAIARQ 230 >gi|51891480|ref|YP_074171.1| glutamate racemase [Symbiobacterium thermophilum IAM 14863] gi|81610699|sp|Q67SL6|MURI_SYMTH RecName: Full=Glutamate racemase gi|51855169|dbj|BAD39327.1| glutamate racemase [Symbiobacterium thermophilum IAM 14863] Length = 277 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 106/244 (43%), Gaps = 19/244 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLMFLFS 69 Q I +FDSG GGL V + + L+P+ + IY D FPYG E A +R M F Sbjct: 9 QRPIGLFDSGEGGLTVARAVADLLPQENLIYACDTAHFPYGPRPLAEVRAFFRRFMEFFV 68 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + K L ++ACNTA D L + FP A P AA + +G I + +T Sbjct: 69 EQNCK----LVIVACNTATAAAIDLLLADAFPIPALGVVQPGAAMAAEASVTGRIGVAAT 124 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T I + ++ + IL R EE G+ I E+++E+E C Sbjct: 125 QGTCDSGIYPQTIRLFRPDAYVVQQACPILVIRAEE---GV-ISGPEVRREVERCLAPIL 180 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA-------RRARCLLPRINTHQ 241 +R D +VL CTH+P + V + + V +D + A RR L P Q Sbjct: 181 AERVDTLVLGCTHFPHMAKVIQDVVGPAVRLVDPGKATAVQVADLLRRRGLLNPGPGPGQ 240 Query: 242 TRVF 245 R F Sbjct: 241 RRAF 244 >gi|194290129|ref|YP_002006036.1| glutamate racemase [Cupriavidus taiwanensis LMG 19424] gi|193223964|emb|CAQ69973.1| GLUTAMATE RACEMASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 269 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 7/249 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++R L+P +Y+AD PYG +H ++ R + ++ + Sbjct: 6 IGVFDSGLGGLSVLREIRALLPHEPLLYLADSKYAPYGEKPEHFVEARTLQACEWMIGQG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA LR P + +G P +K AAA + S ++ +L+T TL+ Sbjct: 66 CKAL-VIACNTATGHAVALLRERLP-VPIIGVEPGLKPAAAASISKVVGVLATANTLKSA 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ S + + + L + VE+ ++ +++ +E D + Sbjct: 124 KFARLLASLDGESRFLCQAGLGLVTLVEQG----QLDGPAVRERLEAYLKPMLDAGADTL 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYP + R ++ + +D ++AR+ L H FLS K Sbjct: 180 VLGCTHYPFLEGAIRAIAGDRLALVDTGIAVARQLARKLDEHALAALPGAAGHDRFLSTK 239 Query: 256 PDIAMRRLM 264 D A R M Sbjct: 240 -DAAHLRAM 247 >gi|18311550|ref|NP_563484.1| glutamate racemase [Clostridium perfringens str. 13] gi|20177975|sp|Q8XHB7|MURI_CLOPE RecName: Full=Glutamate racemase gi|18146234|dbj|BAB82274.1| probable glutamate racemase [Clostridium perfringens str. 13] Length = 260 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F + Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIR-SLSFNAIE 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L K VIACNTA + +LR + + +G PA+K A ++G + +++T A Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187 TL + NL+ Y + + L +E ++ +++K +E ++++ Sbjct: 124 TLTQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDR 179 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 E IVL CTHYP + V + L VD +D S R + L N Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDLVGEKVDIIDGSSGTIRELKRRLEENN 227 >gi|153952784|ref|YP_001393549.1| glutamate racemase [Clostridium kluyveri DSM 555] gi|219853449|ref|YP_002470571.1| hypothetical protein CKR_0106 [Clostridium kluyveri NBRC 12016] gi|189030359|sp|A5N4H0|MURI_CLOK5 RecName: Full=Glutamate racemase gi|254766113|sp|B9DY32|MURI_CLOK1 RecName: Full=Glutamate racemase gi|146345665|gb|EDK32201.1| MurI [Clostridium kluyveri DSM 555] gi|219567173|dbj|BAH05157.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 257 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 7/214 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSG+GG+ VL++ ++ +F+Y D PYG +KK L F + L K Sbjct: 11 FDSGVGGISVLKEAVKILSNENFVYFGDSKMAPYGVRTVEEVKK-LTFNAVEFLLKKNIK 69 Query: 79 LSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ACNTA + +LR + M +G PA+K A + G I I++TP TL + Sbjct: 70 ALVVACNTATSAAIIDLRKAYSKYMPIVGIEPALKPAVECNRKGNIIIMATPMTLAESKF 129 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +NL+ Y S +I + L +EE K + +EI++ +E I +G +VL Sbjct: 130 NNLMKRY-SNSNILPLPCSGLVELIEEG----KTEGEEIERYLEEKLIPLKGNGIAAVVL 184 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 CTHYP I ++ V LD S R+ + Sbjct: 185 GCTHYPFIKKSISKVLNQDVLILDGSKGTVRQLK 218 >gi|262375099|ref|ZP_06068333.1| glutamate racemase [Acinetobacter lwoffii SH145] gi|262310112|gb|EEY91241.1| glutamate racemase [Acinetobacter lwoffii SH145] Length = 290 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 15/258 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V ++ +P F+Y AD PYG +D ++ L + L + Sbjct: 23 IGIFDSGVGGLSVALEIARHLPNERFVYYADTAHVPYGPRDDQEIRA-LTAQAIEWLYRQ 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++V+ACNTA D LR + + +G VPA+K A TQS +++L+TPAT R Sbjct: 82 GCKVAVVACNTASAFSLDYLRDYYGENFPIIGLVPALKPAVLNTQSKTVAVLATPATFRG 141 Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIK--KEIEGCFIEKEGK 190 ++I + +Q + V+S+ L VE G ++ ++ KEI +++ Sbjct: 142 QLIKDVISRFAEPAQVKVLPVTSLDLVPFVE---AGEQMSAACLQTLKEILQPVVDQGA- 197 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDD 247 D +VL CTHYP + + + + +D+ ++AR+ +L + + H+++ Sbjct: 198 --DYLVLGCTHYPFLKSSIQYIFGQKLTLIDSGFAVARQTAQILIKNGLLFEHESKESVK 255 Query: 248 HALFLSGKPDIAMRRLMQ 265 L +SG+ +R ++Q Sbjct: 256 IELVVSGQNAEQLRPILQ 273 >gi|225027973|ref|ZP_03717165.1| hypothetical protein EUBHAL_02233 [Eubacterium hallii DSM 3353] gi|224954687|gb|EEG35896.1| hypothetical protein EUBHAL_02233 [Eubacterium hallii DSM 3353] Length = 274 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 4/219 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 +L + I +FDSG+GG+ VL++M LMP FIY D PYG ++ + + Sbjct: 18 QLSDPIAVFDSGMGGISVLREMTKLMPNEDFIYYGDSKHAPYGTKTLEEVRTLTIEHITY 77 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + +ACNTA + LR +P + +G PAIK A T + +++TP Sbjct: 78 LIKEKHAKAVAVACNTATSAAVRILRDMYPDLPLVGVEPAIKPAVLATGHAKVVVMATPM 137 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR L Y Q I+ + L VE+ GI + ++++ + + K Sbjct: 138 TLREEKFHKLESLYDEQADIYPLPCPGLMEFVEQ---GI-LSGEKLETFLHNLLDPYKDK 193 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 IVL CTHYP + ++++ V D A+ Sbjct: 194 DITGIVLGCTHYPFLKETIQKIAGPSVTIFDGGYGTAKE 232 >gi|118445076|ref|YP_879120.1| glutamate racemase [Clostridium novyi NT] gi|166231036|sp|A0Q3B8|MURI_CLONN RecName: Full=Glutamate racemase gi|118135532|gb|ABK62576.1| glutamate racemase [Clostridium novyi NT] Length = 259 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 5/205 (2%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSG+GGL VL++ ++P FIY D PYG +KK L F + L + Sbjct: 11 FDSGVGGLSVLREAIKVLPNEDFIYFGDSKNAPYGTKTVDEVKK-LTFNAVEFLLGHNVK 69 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 VIACNTA + ++LR+++ + +G PA+K A + G I +++TP TL + Sbjct: 70 AVVIACNTATSAAIEDLRNSYKDIPIIGIEPALKPAVELNKKGKIVVMATPMTLAEKKFN 129 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 +L+ Y + + S+ VE GI +K E+ ++ + K +VL Sbjct: 130 DLMAKYKGRSEM---VSLPCPGLVEYVEKGI-VKGQELNNYLQKKLSIIDKKEISSVVLG 185 Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNS 223 CTHYP I ++ V +D S Sbjct: 186 CTHYPFIKEELSKILGEDVVIIDGS 210 >gi|7415851|dbj|BAA93558.1| glutamate racemase [Escherichia coli O157:H7] Length = 209 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T Sbjct: 1 TAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLAT 59 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R+YT LI + ++C I ++ S + E G + D +K+ + KE Sbjct: 60 RGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKE 119 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 120 PP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 163 >gi|91216701|ref|ZP_01253666.1| glutamate racemase [Psychroflexus torquis ATCC 700755] gi|91185170|gb|EAS71548.1| glutamate racemase [Psychroflexus torquis ATCC 700755] Length = 262 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 115/219 (52%), Gaps = 6/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +++FDSG+GG +L+++ L+P + +Y+AD PYG + L +++ + Sbjct: 6 VVLFDSGVGGTSLLKEIIHLLPHENIVYLADSKNAPYGLRTSQDIIA-LSIKNTELAIQL 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + + V+ACNTA T LRS + S+ F+G PAIK AA +++ I +L+T TL Sbjct: 65 KAKMIVVACNTATTNAISFLRSNY-SLPFIGIEPAIKPAALNSKAKRIGVLATKGTLSSE 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 S+ ++ V + VE + + + ++I+ FI+++ D + Sbjct: 124 LFKQTSESFTEGVNVIEVIGKGIVEAVEGGWTNDERFINNLNQQIQ-PFIKED---IDYL 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+P I+ R+L P V +D+ ++A++ + +L Sbjct: 180 VLGCTHFPYIIPKLRELLPKHVTLIDSGRAVAKQTKAIL 218 >gi|296186868|ref|ZP_06855269.1| glutamate racemase [Clostridium carboxidivorans P7] gi|296048582|gb|EFG88015.1| glutamate racemase [Clostridium carboxidivorans P7] Length = 259 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 10/211 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWEDHALKKRLMFLFSDILD 73 I FDSG+GG+ VL++ L+P F+Y D PYG E+ + RL F + L Sbjct: 8 IGFFDSGVGGISVLKEAVKLLPGEDFVYFGDSNNAPYGIKTVEEAS---RLTFEAVEFLI 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 VIACNTA + +LR + S M +G PA+K A + G I +++TP TL Sbjct: 65 SKNIKAVVIACNTATSAAIIDLRKKYSSVMPVIGIEPALKPAVELKRKGQIVVMATPMTL 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL++ Y +Q ++ + L +E+ + E ++ +IE +++EG Sbjct: 125 AERKFNNLMNRYKNQAQMYPMPCPGLVELIEQGMVEGEEVEKYLRDKIEP--LKEEG--I 180 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 IVL CTHYP I +L V +D S Sbjct: 181 AAIVLGCTHYPFIKKTLSKLLNNEVPIIDGS 211 >gi|94969536|ref|YP_591584.1| glutamate racemase [Candidatus Koribacter versatilis Ellin345] gi|166231022|sp|Q1INP0|MURI_ACIBL RecName: Full=Glutamate racemase gi|94551586|gb|ABF41510.1| glutamate racemase [Candidatus Koribacter versatilis Ellin345] Length = 291 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 112/217 (51%), Gaps = 12/217 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL+++ L+P ++Y D PYG + R L+ Sbjct: 8 IGVFDSGFGGLTVLREIVRLVPNAEYLYFGDTARLPYGTKSADTVA-RYALGACHFLEGQ 66 Query: 76 QPVLSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 VIACNTA L D E ++ P++ + P AAA +++ ++++ T AT+ Sbjct: 67 GAEHLVIACNTATALAMDAIEAKANVPAIGVV--EPGASAAAAISKTRSVAVIGTEATI- 123 Query: 134 RTYTSNLIHSYVSQCHIHLV--SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +S+ H + + I+ ++ +L VEE + + + ++ F+ +E +R Sbjct: 124 ---SSHAYHHALERLGINAYEKATPLLVPLVEEGWTDHPVTKQVAEIYLQDAFVRRE-QR 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +DV+VL CTHYPLI + R++ P V +D+++S A+ Sbjct: 180 SDVLVLGCTHYPLIRPLLRKVVPSDVAIVDSAESTAK 216 >gi|168205832|ref|ZP_02631837.1| glutamate racemase [Clostridium perfringens E str. JGS1987] gi|169343233|ref|ZP_02864244.1| glutamate racemase [Clostridium perfringens C str. JGS1495] gi|169298531|gb|EDS80612.1| glutamate racemase [Clostridium perfringens C str. JGS1495] gi|170662679|gb|EDT15362.1| glutamate racemase [Clostridium perfringens E str. JGS1987] Length = 260 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F + Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRS-LSFNAIE 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L K VIACNTA + +LR + + +G PA+K A ++G + +++T A Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187 TL + NL+ Y + + L +E ++ +++K +E ++++ Sbjct: 124 TLTQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDR 179 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 E IVL CTHYP + V + + VD +D S R + L N Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENN 227 >gi|126663124|ref|ZP_01734122.1| glutamate racemase [Flavobacteria bacterium BAL38] gi|126624782|gb|EAZ95472.1| glutamate racemase [Flavobacteria bacterium BAL38] Length = 259 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 130/255 (50%), Gaps = 24/255 (9%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS--- 69 +N I +FDSGIGG + +++ L+P + IY+AD PYG K+ ++ L S Sbjct: 4 ENPIGLFDSGIGGTSIWKEVHSLLPNENTIYLADSKNAPYG----LKSKEEIIALSSKNT 59 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++L + ++ACNTA T ELR+ + + F+G PAIK AA +++ I IL+T Sbjct: 60 ELLLNLNCKIIIVACNTATTNAIKELRAKY-DVPFIGIEPAIKPAAIQSKTQKIGILATK 118 Query: 130 ATLRRTYTSNLIH-SYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 TL S L H S + + ++ + L +E ED +K + IE Sbjct: 119 GTLN----SELFHISAANHPEVKIIEQIGHGLVQLIENGDIDSAEMEDLLKSYL-NPMIE 173 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTR 243 K D +VL C+HYP ++ +++ P + +D+ +++A++ + +L + INT + + Sbjct: 174 ---KNIDFLVLGCSHYPYLIPQIKKIIPAKIRIIDSGEAVAKQTQNILEQNFLINTSKNK 230 Query: 244 VFDDHALFLSGKPDI 258 + + +P++ Sbjct: 231 --SSQIFYTNSEPEV 243 >gi|167772360|ref|ZP_02444413.1| hypothetical protein ANACOL_03737 [Anaerotruncus colihominis DSM 17241] gi|167665463|gb|EDS09593.1| hypothetical protein ANACOL_03737 [Anaerotruncus colihominis DSM 17241] Length = 269 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 17/231 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI- 71 Q +I +FDSG+GGL ++++R L+PE H IY D PYG+ ++K + DI Sbjct: 3 QRAIGVFDSGLGGLTTVRELRRLLPEEHIIYFGDTGRVPYGSRGREIIRK---YAVQDIR 59 Query: 72 -LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ + + AC T ++I E+ + + F G V PA + A A + +G I ++ T Sbjct: 60 FLRRFDVKIIIAACGTVSSVITPEIVES-AGVPFSGVVLPAAQAACAASTNGRIGVIGTA 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF----I 185 ATLR I H + + VE G ++EI ++ + I Sbjct: 119 ATLRSGAYGRAIRGIRPDAHTFGNACPLFVPLVEN---GFIQPDNEITIKVAQTYLQPMI 175 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 E E D ++L CTHYPLI V +L V +D+ +AR A+ LL R Sbjct: 176 ENE---VDTLILGCTHYPLIRPVIDRLLRSRVTLIDSGAQVARWAQTLLTR 223 >gi|326573641|gb|EGE23600.1| glutamate racemase [Moraxella catarrhalis CO72] Length = 285 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 35/236 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72 Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129 Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185 TL+ + +IH + +H +L VE G+ I D + K+ + + Sbjct: 130 TLQGQLLAQVIHKVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234 ++G D++VL CTHYP FRQ L W + LD+ +IA+R R LL Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVRSLL 234 >gi|255524010|ref|ZP_05390972.1| glutamate racemase [Clostridium carboxidivorans P7] gi|255512297|gb|EET88575.1| glutamate racemase [Clostridium carboxidivorans P7] Length = 257 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 10/211 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWEDHALKKRLMFLFSDILD 73 I FDSG+GG+ VL++ L+P F+Y D PYG E+ + RL F + L Sbjct: 6 IGFFDSGVGGISVLKEAVKLLPGEDFVYFGDSNNAPYGIKTVEEAS---RLTFEAVEFLI 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 VIACNTA + +LR + S M +G PA+K A + G I +++TP TL Sbjct: 63 SKNIKAVVIACNTATSAAIIDLRKKYSSVMPVIGIEPALKPAVELKRKGQIVVMATPMTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL++ Y +Q ++ + L +E+ + E ++ +IE +++EG Sbjct: 123 AERKFNNLMNRYKNQAQMYPMPCPGLVELIEQGMVEGEEVEKYLRDKIEP--LKEEG--I 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 IVL CTHYP I +L V +D S Sbjct: 179 AAIVLGCTHYPFIKKTLSKLLNNEVPIIDGS 209 >gi|320530742|ref|ZP_08031786.1| glutamate racemase [Selenomonas artemidis F0399] gi|320137029|gb|EFW28967.1| glutamate racemase [Selenomonas artemidis F0399] Length = 262 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 9/219 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL R +P+ F++ AD PYG ++ + F ++++ Sbjct: 3 IALFDSGLGGLTVLGHARRALPDEEFLFFADRDHVPYGTKTVDEVRGFVRDAFRFLVEEE 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA ++ DE+R + + +G PA+K+A ++ + + TP T+R Sbjct: 63 RAEAVVIACNTATSVSADEMRRRY-DIPIIGMEPAVKKALDADRTRRVLVTGTPITVRGE 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI +Y + HLV + L R+ E+A + +++ + + + I Sbjct: 122 KLHRLIDTYDAN---HLVDLLPL-PRLVEFAENQEFVSPHVEEYLRTALAPFDFAQYSAI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDS----IARRA 230 VL CTH+ R L P + + D +D +ARRA Sbjct: 178 VLGCTHFNFFKDTMRSLMPETMTFADGNDGTVEELARRA 216 >gi|326563047|gb|EGE13321.1| glutamate racemase [Moraxella catarrhalis 103P14B1] gi|326577286|gb|EGE27174.1| glutamate racemase [Moraxella catarrhalis 101P30B1] Length = 285 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 35/236 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72 Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129 Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185 TL+ + +IH + +H +L VE G+ I D + K+ + + Sbjct: 130 TLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234 ++G D++VL CTHYP FRQ L W + LD+ +IA+R R LL Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVRSLL 234 >gi|168185800|ref|ZP_02620435.1| glutamate racemase [Clostridium botulinum C str. Eklund] gi|169295922|gb|EDS78055.1| glutamate racemase [Clostridium botulinum C str. Eklund] Length = 259 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 13/209 (6%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSG+GGL VL++ ++P FIY D PYG +KK L F + L ++ Sbjct: 11 FDSGVGGLSVLREAIKILPNEDFIYFGDSKNAPYGTKTVDEVKK-LTFNAVEFLLEHNVK 69 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 VIACNTA + ++LR+++ + +G PA+K A + G I I++TP TL + Sbjct: 70 AIVIACNTATSAAIEDLRNSYKDIPIIGIEPALKPAVELHKKGKIVIMATPMTLAEKKFN 129 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK----EGKRTDV 194 L+ Y + + S+ VE GI +K EI + +EK + K Sbjct: 130 KLMEKYKGKSEM---VSLPCPGLVEYVEKGI-VKGQEINR----FLLEKLSVIDKKEISS 181 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 +VL CTHYP I ++ V +D S Sbjct: 182 VVLGCTHYPFIKEELSKILGEDVVIIDGS 210 >gi|317486144|ref|ZP_07944988.1| Asp/Glu/Hydantoin racemase [Bilophila wadsworthia 3_1_6] gi|316922593|gb|EFV43835.1| Asp/Glu/Hydantoin racemase [Bilophila wadsworthia 3_1_6] Length = 296 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 4/216 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL MR LMP ++++ D PYG + + + + ++ Sbjct: 10 QLPIGLFDSGVGGLTVLDAMRRLMPGEDYLFLGDTARVPYGAKSQKTIVRYSLQAAAKLI 69 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + +L VIACNTA LR T+P M +G + P + A + SG I++++T +T Sbjct: 70 GQRIKLL-VIACNTATAAALPALRETWPDMPIIGVIEPGSRAACEASPSGDIAVIATEST 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + I + + ++ + EE I E + + +E F ++ Sbjct: 129 IRSGAYAEAILRRRPEAQVRSLACPLFVPLAEEGWFDGPIAEGVVSRYLEPLF--EKSPA 186 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTHYP++ R++ V +D++ + A Sbjct: 187 PDCLVLGCTHYPMLAAAIRKVVGPEVHIVDSAATTA 222 >gi|187777456|ref|ZP_02993929.1| hypothetical protein CLOSPO_01023 [Clostridium sporogenes ATCC 15579] gi|187774384|gb|EDU38186.1| hypothetical protein CLOSPO_01023 [Clostridium sporogenes ATCC 15579] Length = 260 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 6/216 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L Sbjct: 11 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMNK 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 70 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 128 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL+ Y I + L +E+ GI + D I ++ F + + ++ I Sbjct: 129 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 184 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 VL CTHYP + ++++ +D S ++ + Sbjct: 185 VLGCTHYPFVEETLKEVTHNKACIIDGSLGTSKELK 220 >gi|150003444|ref|YP_001298188.1| glutamate racemase [Bacteroides vulgatus ATCC 8482] gi|254881258|ref|ZP_05253968.1| glutamate racemase [Bacteroides sp. 4_3_47FAA] gi|294777674|ref|ZP_06743125.1| glutamate racemase [Bacteroides vulgatus PC510] gi|319640260|ref|ZP_07994985.1| glutamate racemase [Bacteroides sp. 3_1_40A] gi|149931868|gb|ABR38566.1| glutamate racemase [Bacteroides vulgatus ATCC 8482] gi|254834051|gb|EET14360.1| glutamate racemase [Bacteroides sp. 4_3_47FAA] gi|294448742|gb|EFG17291.1| glutamate racemase [Bacteroides vulgatus PC510] gi|317388035|gb|EFV68889.1| glutamate racemase [Bacteroides sp. 3_1_40A] Length = 281 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 45/280 (16%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + + S + + Sbjct: 12 IGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQAVSKLFELG 71 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 P L ++ACNTA T+ + L + LG + P + T+S + IL+T Sbjct: 72 CP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRSRHVGILATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186 T++ SY+ + IH +S I+ V AC + ++ +E + E F++ Sbjct: 131 GTIKS-------ESYLLE--IHKLSPDIV---VTGEACPMWVSLVENNEYQSEGADYFVK 178 Query: 187 KEGKR-------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--- 236 + R D I+L CTHYPL++ RQ +P P+ + + +AR R L R Sbjct: 179 QHINRLLDKDPMIDTIILGCTHYPLLLDKIRQFTPEPIRIISQGEYVARSLRDYLNRHPE 238 Query: 237 -------------INTHQTRVFDDHALFLSGKPDIAMRRL 263 + T F++ A G+ DI ++ + Sbjct: 239 MDARCDKGGNCRFLTTESENKFEESASIFLGRQDIKVKSI 278 >gi|163846057|ref|YP_001634101.1| glutamate racemase [Chloroflexus aurantiacus J-10-fl] gi|222523790|ref|YP_002568260.1| glutamate racemase [Chloroflexus sp. Y-400-fl] gi|163667346|gb|ABY33712.1| glutamate racemase [Chloroflexus aurantiacus J-10-fl] gi|222447669|gb|ACM51935.1| glutamate racemase [Chloroflexus sp. Y-400-fl] Length = 262 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 113/223 (50%), Gaps = 8/223 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V++ + +P+ +Y+AD PYG ++ R + ++D+ Sbjct: 2 IGIFDSGLGGLSVMRAIHERLPDTDLLYLADSAYCPYGPRPLSEIRDRALACGRWLVDQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA + LR P + +G P +K A A T++G +++L+T TL Sbjct: 62 ARIV-VVACNTATAAAIELLRRELP-VPVVGMEPGVKPAVAATRNGKVAVLATSGTLASD 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L+ +Y + ++ ++ L ++VE +++ D+ + IE DVI Sbjct: 120 RFRSLVQAYAAGVEVYPLACPDLVAQVEAG----ELQSDQTRNLIEQHLATV--PEVDVI 173 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 VL CTH+P + + + V +D ++A + + +IN Sbjct: 174 VLGCTHFPPLKPLIATCAGSHVTVIDTGPAVAAQTERIARQIN 216 >gi|291523945|emb|CBK89532.1| glutamate racemase [Eubacterium rectale DSM 17629] Length = 258 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 4/217 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++ Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLEQVRALTCEHAKELILN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ Y I + L + VE + D++++ +E D Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +VL CTHYP + + +++ V D + AR + Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMK 214 >gi|238789626|ref|ZP_04633410.1| Glutamate racemase [Yersinia frederiksenii ATCC 33641] gi|238722379|gb|EEQ14035.1| Glutamate racemase [Yersinia frederiksenii ATCC 33641] Length = 212 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 4/209 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ Sbjct: 1 MLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVV 59 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T+ +YT +LI + + C I L+ S L E G + + +KK + Sbjct: 60 GLLATRGTVHASYTLDLIERFATDCKIELLGSSELVELAESKLHGGVVPVEALKKILHPW 119 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + Sbjct: 120 LMMREPP--DTIVLGCTHFPLLAEELAQVLPEGTRMVDSGAAIARRTAWLISSQENIISS 177 Query: 244 VFDDHALFLSGKPDI-AMRRLMQGFGLKS 271 ++ A ++ D A+ ++QG+G + Sbjct: 178 TDENIAYCMALNADTDALLPVLQGYGFPT 206 >gi|332704699|ref|ZP_08424787.1| Glutamate racemase [Desulfovibrio africanus str. Walvis Bay] gi|332554848|gb|EGJ51892.1| Glutamate racemase [Desulfovibrio africanus str. Walvis Bay] Length = 282 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 2/222 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R L+P F Y+ D PYG ++ R S L Sbjct: 14 IGVFDSGVGGLTVLRALRELLPGEDFRYLGDTARLPYGTKSRESVV-RYALQSSRHLVAQ 72 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA +L +P + +G V P + A +G I++++T +T++ Sbjct: 73 GVKLLVVACNTATAAALPDLAEAYPGIPVVGVVRPGARAGCALNTNGRIAVMATESTVQG 132 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I I + + + EE + E +K+ ++ F E + Sbjct: 133 GAYQAAIRELCPNMRIEAAACSLFVALAEEGWTEGPLVEGIVKRYLDPLFARFEDQPPTS 192 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 +VL CTH+P++ +++ V +D++ + A+ R LL R Sbjct: 193 LVLGCTHFPMLAGAIAKVAGEGVTVIDSAVTTAQEVRELLVR 234 >gi|152980748|ref|YP_001352569.1| glutamate racemase [Janthinobacterium sp. Marseille] gi|151280825|gb|ABR89235.1| glutamate racemase [Janthinobacterium sp. Marseille] Length = 284 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 7/238 (2%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M YP I IFDSG+G L VL+ ++ +P H + AD PYG D A+ Sbjct: 1 MSFSAYPDPVAADAPIGIFDSGVGALSVLRHIQARLPSEHLLCFADSGYAPYGGKSDAAI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + + K + V+ACNTA + LR +P + +G P +K AA +++S Sbjct: 61 IERTLDIAAFLTTKNIKAI-VVACNTATAAAIEALRQHYPQLIIVGVEPGLKPAAVFSKS 119 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G +L+T +TL + L + I ++ + VE+ G ++ E + Sbjct: 120 GKAGVLATASTLASSRFIALRDQISTSTGITFLTQACV-GLVEQIEKG-ELDSTETIAML 177 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLI---VHVFRQL-SPWPVDWLDNSDSIARRARCLL 234 E D + L CTHYP + + V Q S PV +D ++++R+ LL Sbjct: 178 ERYVTPLLRGGADTLALGCTHYPFVQPAIEVIAQRESAVPVTIIDTGEAVSRQLERLL 235 >gi|251773011|gb|EES53567.1| glutamate racemase [Leptospirillum ferrodiazotrophum] Length = 315 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 4/187 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+ L PE F+Y+ D FPYG+ A+ R + +L +Y+P Sbjct: 50 LFDSGMGGLSVLRHFLELFPEEDFLYLGDMARFPYGSKSREAI-CRFAVEDAGLLSRYRP 108 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRRTY 136 V V AC T + D L S FP + +G V A +AA A T++G + +L T T+R Sbjct: 109 VTLVAACFTVSSQALDILVSRFPEIRVVGMVEAGARAALAMTRTGHVGVLGTEGTIRSGA 168 Query: 137 TSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + Q ++ +S + A VEE +I E + +E +E D I Sbjct: 169 YPAIFQRLGGQETNVFGISCPLFAPMVEEGWIDGEIPE-RVAREYLAPIVEGRTPDVDTI 227 Query: 196 VLACTHY 202 +L CTHY Sbjct: 228 ILGCTHY 234 >gi|238923092|ref|YP_002936605.1| glutamate racemase [Eubacterium rectale ATCC 33656] gi|238874764|gb|ACR74471.1| glutamate racemase [Eubacterium rectale ATCC 33656] Length = 258 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 4/217 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++ Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLERVRALTCEHAKELILN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ Y I + L + VE + D++++ +E D Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +VL CTHYP + + +++ V D + AR + Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMK 214 >gi|325294218|ref|YP_004280732.1| Glutamate racemase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064666|gb|ADY72673.1| Glutamate racemase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 263 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 9/225 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GGL VL+ +R +P IY D PYG + R + +L Sbjct: 3 ERPIGIFDSGVGGLTVLRALRKKLPSEDLIYFGDTARVPYGTKSPKTI-IRYSIENTKLL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + ++ACNT+ + + L+S F + LG + P + A + T+SG + ++ T AT Sbjct: 62 KRFNVKMVIVACNTSSSYALEILKSEFSDVPILGVINPGARLAVSATKSGKVGVIGTEAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEGK 190 ++ IH C + + +EE D + E+ ++ GK Sbjct: 122 IKSGAYRKAIHFINPSCLVFEKVCPLFVPLIEEGWL-----NDPVTLEVARRYVLPLLGK 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 D +VL CTHYPLI + ++ V +D++ +IA LP Sbjct: 177 GIDTLVLGCTHYPLIKDILLKICKN-VTLIDSAQAIADEVAKALP 220 >gi|261854703|ref|YP_003261986.1| glutamate racemase [Halothiobacillus neapolitanus c2] gi|261835172|gb|ACX94939.1| glutamate racemase [Halothiobacillus neapolitanus c2] Length = 286 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 20/228 (8%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + K I IFDSG+GGL V Q +R +P IY+AD PYG+ + +R + + Sbjct: 5 DTKPTAPIGIFDSGVGGLSVYQAVRHALPAEDIIYIADSGFAPYGDRSSDFITERAVAM- 63 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +D L V+ACNTA + +LR F S+ + PAIK A ++QSG I +L+T Sbjct: 64 TDFLIAAGAKAVVVACNTATVIAVTQLRRQF-SIPIIALEPAIKPAIEHSQSGTIGVLAT 122 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMIL-------ASRVEEYACGIKIKEDEIKKEIE 181 R+T S + C H V++ +L +VE D I++ +E Sbjct: 123 ----RKTIESPAVERL---CRTHGVNTRVLLQPCPGFVEQVERGEMDHPDTTDLIRRYVE 175 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D +VL CTHY + R + V LD+S ++AR+ Sbjct: 176 PLL----AAGADTLVLGCTHYVYLAQQIRTIVGPDVSILDSSAAVARQ 219 >gi|291528592|emb|CBK94178.1| glutamate racemase [Eubacterium rectale M104/1] Length = 258 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 4/217 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++ Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLERVRALTCEHAKELILN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ Y I + L + VE + D++++ +E D Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +VL CTHYP + + +++ V D + AR + Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMK 214 >gi|150014924|ref|YP_001307178.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052] gi|149901389|gb|ABR32222.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052] Length = 284 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 23/222 (10%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSG+GGL V+++ +MP +FIY D PYG K+++ + +D + + Sbjct: 36 FDSGVGGLSVMREAISIMPNENFIYFGDSKNAPYG-------IKKVIEVRDLTIDAVEFL 88 Query: 79 LS------VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 LS VIACNTA + +E+RS + ++ +G PA+K A + G I I++TP TL Sbjct: 89 LSKNVKAVVIACNTATSAAIEEIRSKYKQISIIGIEPALKPAVKLNRKGQIIIMATPMTL 148 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEKEG 189 R L+ Y ++ I S+ A VE GI ED +K++ +G +++ + Sbjct: 149 REKKFKLLMDKYKNEADII---SLPCAGLVEFIEQGIVEGEDLEYYLKEKFKG-YLDND- 203 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 IVL CTHYP I + + +D A+ + Sbjct: 204 --ISSIVLGCTHYPFIKKALSNVIGKEIPLIDGGFGTAQELK 243 >gi|317151766|ref|YP_004119814.1| glutamate racemase [Desulfovibrio aespoeensis Aspo-2] gi|316942017|gb|ADU61068.1| glutamate racemase [Desulfovibrio aespoeensis Aspo-2] Length = 279 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 6/235 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E + I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + Sbjct: 2 ENAAKLPIGMFDSGVGGLTVLRALRERMPCEDVVYLGDTARLPYGTKSPQTVSRYAVQCA 61 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 ++++ + +L V+ACNTA + LR +P + +G V P + A T++ I +++ Sbjct: 62 AELVRREIKLL-VVACNTASAVAIGPLREAYPGIPVIGVVEPGAQAACRATRNQAIGVIA 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ IH+ + I + + EE + E + + F Sbjct: 121 TEATIAGGAYHRAIHAIAPEARIVGHPCQLFVALAEEGWIDGPVAEGVAARYLHPVFRPA 180 Query: 188 EGKRT----DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 G + D +VL CTH+PL+ R + V +D++ + A L R+N Sbjct: 181 SGTESPVIPDTLVLGCTHFPLLAPAIRSVLDPSVVIVDSAATTAETVYAELARLN 235 >gi|187934900|ref|YP_001884328.1| glutamate racemase [Clostridium botulinum B str. Eklund 17B] gi|229486235|sp|B2THT3|MURI_CLOBB RecName: Full=Glutamate racemase gi|187723053|gb|ACD24274.1| glutamate racemase [Clostridium botulinum B str. Eklund 17B] Length = 258 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 5/233 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I FDSG+GGL V+++ LMP ++IY D PYG ++ Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAIRLMPNENYIYFGDSKNAPYGVKTVEEVRTLTFNAVES 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L+K + V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP Sbjct: 63 LLEKNVKAI-VVACNTATSAAIDLVRSKYENIPIIGIEPALKLATKYNRKGNIIIMATPM 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL+ +L+ Y I S+ A VE GI + +E+++ ++ F + Sbjct: 122 TLKENKFKSLMEKYGENYDI---VSLPCAKLVEFIEHGI-LSGEELEEYLKEKFKPYKNN 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 V+VL CTHYP I ++ + +D ++ R L N T Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTE 230 >gi|189345889|ref|YP_001942418.1| glutamate racemase [Chlorobium limicola DSM 245] gi|189340036|gb|ACD89439.1| glutamate racemase [Chlorobium limicola DSM 245] Length = 274 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD-- 70 ++ I IFDSG+GGL V++ M+ ++P IY D PYG+ ++K + D Sbjct: 11 ESPIGIFDSGVGGLTVVRAMQAILPAERLIYFGDTARVPYGSKSQVTIRK---YAHDDTA 67 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTP 129 IL +YQP + ++ACNT L D + T ++ +G + A Q A + ++ I ++ T Sbjct: 68 ILMRYQPKMIIVACNTVSALALDVVEKTCGNIPVIGVLEAGAQLAVSRSEHKRIGVIGTQ 127 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188 AT+ + I+ S+ +H + + EE + + I ++ + Sbjct: 128 ATVCSNAYACAINMLDSEVTVHSKACPLFVPLAEE-----GFTDHPATRLIAAEYLRAFD 182 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 G D +VL CTHYP++ + Q + +D+++++A RA+ LL Sbjct: 183 GHDIDTLVLGCTHYPILRSMIEQTIGPDIRIIDSAEAVACRAKELL 228 >gi|326578047|gb|EGE27911.1| glutamate racemase [Moraxella catarrhalis O35E] Length = 285 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72 Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129 Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185 TL+ + +IH + +H +L VE G+ I D + K+ + + Sbjct: 130 TLQGQLLAQVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234 ++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234 >gi|226951018|ref|YP_002806109.1| glutamate racemase [Clostridium botulinum A2 str. Kyoto] gi|254766112|sp|C1FNG8|MURI_CLOBJ RecName: Full=Glutamate racemase gi|226841163|gb|ACO83829.1| glutamate racemase [Clostridium botulinum A2 str. Kyoto] Length = 257 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 6/223 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K +++K Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALTSNATDFLMNKG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 68 IKAL-VVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL+ Y I + L +E+ GI + D I ++ F + + ++ I Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDIIYNYLKDKFSKYDNEKISSI 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 VL CTHYP I ++++ +D S +R + L N Sbjct: 182 VLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSN 224 >gi|188587547|ref|YP_001919512.1| glutamate racemase [Clostridium botulinum E3 str. Alaska E43] gi|229486234|sp|B2UX89|MURI_CLOBA RecName: Full=Glutamate racemase gi|188497828|gb|ACD50964.1| glutamate racemase [Clostridium botulinum E3 str. Alaska E43] Length = 258 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 5/233 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I FDSG+GGL V+++ LMP ++IY D PYG ++ Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAIRLMPNENYIYFGDSKNAPYGIKTVEEVRTLTFNAVES 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L+K + V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP Sbjct: 63 LLEKNVKAI-VVACNTATSAAIDLVRSKYKNIPIIGIEPALKLATKYNRKGNIIIMATPM 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL+ +L+ Y I S+ A VE GI + +E+++ ++ F + Sbjct: 122 TLKEKKFKSLMEKYGENYDI---VSLPCAKLVEFIEHGI-LSGEELEEYLKEKFKSYKNN 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 V+VL CTHYP I ++ + +D ++ R L N T Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTE 230 >gi|8102060|gb|AAF72725.1|AF264024_1 glutamate racemase [Psychrobacter sp. St1] Length = 296 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 14/261 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 KK I +FDSG+GGL V + +P ++Y AD + PYGN D A + L Sbjct: 9 NKKRNAPIGLFDSGVGGLSVYLHLAQQLPAERYVYYADTLNVPYGN-RDSADIEALTLTA 67 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D L + L VIACN+A + R +P + +G VPA+K A + +++G + +L+T Sbjct: 68 VDWLYEQGCKLIVIACNSASAYALETARRRYPQLPIVGLVPALKPAISASKTGRVVVLAT 127 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED-EIKKEIEGCFIEK 187 ATL T + +I + ++ + +V+ V G+ ++D ++ + Sbjct: 128 KATLNGTLLNEVIDHF-AKPNNTVVTKYFDPQLVPWVEAGMPEQDDTALRLRQQLTLFAH 186 Query: 188 EGKRTDVIVLACTHYP-----LIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTH 240 +G D +VL CTHYP L+ + +Q V +D+ +IA R + LL +++ Sbjct: 187 DG--VDQLVLGCTHYPFFKTFLLNEIAQQQLAMQV--VDSGQAIAERVKQLLAANQLSAL 242 Query: 241 QTRVFDDHALFLSGKPDIAMR 261 DDH L + K + + Sbjct: 243 IDNTPDDHCLETTDKTKVVTQ 263 >gi|146299447|ref|YP_001194038.1| glutamate racemase [Flavobacterium johnsoniae UW101] gi|146153865|gb|ABQ04719.1| glutamate racemase [Flavobacterium johnsoniae UW101] Length = 259 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 15/226 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 N I +FDSGIGG + + L+P IY+AD PYG + KK + FL Sbjct: 4 NNPIGVFDSGIGGTSIWSAIHDLLPNEKTIYLADSKNAPYGQKTKEEIVALSKKNVEFLL 63 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + L V+ACNTA T ELR+ + + F+G PAIK AA +++ +I IL+T Sbjct: 64 ENNCK-----LIVVACNTATTNAIRELRNDY-DIPFIGIEPAIKPAATNSRTQVIGILAT 117 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL S L + + + V+ G + E+ + +E Sbjct: 118 KGTLN----SELFNKTAEMFQHTTIIEQVGYGLVQLIEDG-NLNSPEMTQLLESYLQPMI 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL C+HYP ++ +++ P + +D+ +++AR+ + +L Sbjct: 173 DANIDYLVLGCSHYPYLIPQIKKILPDHIQIIDSGEAVARQTQNVL 218 >gi|323525504|ref|YP_004227657.1| glutamate racemase [Burkholderia sp. CCGE1001] gi|323382506|gb|ADX54597.1| glutamate racemase [Burkholderia sp. CCGE1001] Length = 295 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 6/212 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL+ +R P+ +YVAD + PYG +D + R + + ++ + Sbjct: 25 IFDSGLGGLSVLRAVRAQSPDEALLYVADSLYAPYGERDDDFIADRTLAIGEWLVKQGAK 84 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA +R P + +G P +K AA ++++ + +L+T TLR Sbjct: 85 AL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALHSRTRVAGVLATQVTLRSARF 142 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L+ Y + C L VE G E++ + D +VL Sbjct: 143 QALLARYAADCRFICQPGHGLVQAVERCDVG----SAELRALLASYLQPMLEAGADTLVL 198 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 CTHYP + R + + +D S +IAR+ Sbjct: 199 GCTHYPFLDAAIRDIVGDRMALVDTSVAIARQ 230 >gi|262037470|ref|ZP_06010930.1| glutamate racemase [Leptotrichia goodfellowii F0264] gi|261748505|gb|EEY35884.1| glutamate racemase [Leptotrichia goodfellowii F0264] Length = 261 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 17/229 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70 SI IFDSG+GGL VL+++R ++P Y+ D PYG + K+ FL Sbjct: 2 SIGIFDSGVGGLTVLKEIRKVLPNEKIYYLGDTARVPYGEKTKELIVRYSKQITEFLLEQ 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129 +D V+ACNTA +L +EL+ TF + +G V A +K A T++ I ++ T Sbjct: 62 NVDAI-----VVACNTATSLALEELKETF-RVPIIGVVDAGVKTALYTTKNNKIGVIGTK 115 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ I + S ++ S + +EE I + EI + ++++ Sbjct: 116 ATINSRKYETEIKNKNSAIEVYSKSCPLFVPVIEE-----GITKGEIVDLVVKMYLDEFK 170 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 ++ D ++L CTHYPL+ + L P ++ +D + A + +L N Sbjct: 171 EKIDSLILGCTHYPLLKETIKNLYP-NIEIVDPAKETAEDLKKILTDNN 218 >gi|302876669|ref|YP_003845302.1| glutamate racemase [Clostridium cellulovorans 743B] gi|307687344|ref|ZP_07629790.1| glutamate racemase [Clostridium cellulovorans 743B] gi|302579526|gb|ADL53538.1| glutamate racemase [Clostridium cellulovorans 743B] Length = 259 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 6/218 (2%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++ +P+ + I+ D PYG D +KK L F + L K Q Sbjct: 11 MDSGVGGLSVMKEAIKALPQENLIHFGDSKNAPYGIKTDEEIKK-LTFSAVEFLIKKQCK 69 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 VIACNTA ++ ++LR + + +G PA+K A + G I +++TP TL++ + Sbjct: 70 AIVIACNTATSVAINDLREIYKEVPIIGIEPAVKPAVELNEDGKIIVMATPVTLKKEKFN 129 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 +L+ Y S I + L +E G+ ++ +E+ + F + +VL Sbjct: 130 HLLEMYGSDREIIFLPCPELVELIER---GV-LEGEELDNYLLSKFKPYLNDKISAVVLG 185 Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 CTHYP +++ +D S ++ + +L R Sbjct: 186 CTHYPFAKKAIKKIV-GDAKIIDGSYGTVKQLKNILMR 222 >gi|300857321|ref|YP_003782305.1| glutamate racemase [Clostridium ljungdahlii DSM 13528] gi|300437436|gb|ADK17203.1| glutamate racemase [Clostridium ljungdahlii DSM 13528] Length = 261 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 101/221 (45%), Gaps = 14/221 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL++ ++ F+Y D PYG + KRL F ++L Sbjct: 8 IGFFDSGIGGISVLKEAVKILSNEDFVYFGDSKMAPYGVKTAEEV-KRLTFNAVELLLTK 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + +LR + SM +G PA+K A + + G I I++T TL Sbjct: 67 NIKALVVACNTATSAAIIDLRKKYSKSMPIIGIEPALKPAVEFNRKGKIVIMATTMTLSE 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD- 193 SNL+ Y S+ I + L +E+ E E E+EG EK D Sbjct: 127 RKFSNLMKKYESRSSIQPLPCPGLVELIEQGKT-----EGE---EVEGYLKEKLNSLKDE 178 Query: 194 ---VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +VL CTHYP + R++ + +D S + + Sbjct: 179 GIAAVVLGCTHYPFVKKSIRKILNEDIPIIDGSKGTVEQLK 219 >gi|326569565|gb|EGE19619.1| glutamate racemase [Moraxella catarrhalis BC8] Length = 285 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72 Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129 Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185 TL+ + +IH + +H +L VE G+ I D + K+ + + Sbjct: 130 TLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234 ++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234 >gi|313896052|ref|ZP_07829606.1| glutamate racemase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975477|gb|EFR40938.1| glutamate racemase [Selenomonas sp. oral taxon 137 str. F0430] Length = 262 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 9/219 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL R +P+ F++ AD PYG ++ + F ++++ Sbjct: 3 IALFDSGLGGLTVLGHARRALPDEEFLFFADRDHVPYGTKTVDEVRGFVRDAFRFLVEEE 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA ++ DE+R + + +G PA+K+A ++ + + TP T+R Sbjct: 63 RVEAIVIACNTATSVSADEMRRCY-DIPIIGMEPAVKKALDADRTRRVLVTGTPITVRGE 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI +Y + HLV + L R+ E+A + +++ + + + I Sbjct: 122 KLHRLIDTYDAN---HLVDLLPL-PRLVEFAENQEFVSPHVEEYLRTALAPFDLAQYSAI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDS----IARRA 230 VL CTH+ R L P + + D +D +ARRA Sbjct: 178 VLGCTHFNFFKDTMRSLMPETMTFADGNDGTVEELARRA 216 >gi|326560827|gb|EGE11193.1| glutamate racemase [Moraxella catarrhalis 46P47B1] gi|326561925|gb|EGE12260.1| glutamate racemase [Moraxella catarrhalis 7169] gi|326567030|gb|EGE17153.1| glutamate racemase [Moraxella catarrhalis 12P80B1] Length = 285 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72 Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129 Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185 TL+ + +IH + +H +L VE G+ I D + K+ + + Sbjct: 130 TLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234 ++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234 >gi|326336585|ref|ZP_08202754.1| glutamate racemase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691250|gb|EGD33220.1| glutamate racemase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 259 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 114/226 (50%), Gaps = 7/226 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FDSG+GG + + + L+P +++AD + PYG + L ++ Sbjct: 1 MNTPIGLFDSGVGGTTIWRTLVRLLPYEDTLFLADSIHAPYGEKTSEEIIA-LCEKNTEY 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L ++ L ++ACNTA T LR+ + + F+G PAIK A Y+Q+ I +L+T +T Sbjct: 60 LLEHNSKLIIVACNTATTNAISHLRAKY-KVPFIGIEPAIKPAGLYSQTKTIGVLATQST 118 Query: 132 LRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 LR + + + H+ + L +EE +I E+ + +E + Sbjct: 119 LRSAFFARTCQQLFDKGIHVIKQEGVGLVPLIEEG----RINTPEMIELLEKYLQPMIEQ 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 D +VL CTHYP + + ++ P V +D+++++A++ + +L + Sbjct: 175 NMDYLVLGCTHYPYLTSLISEILPEKVRIMDSAEAVAKQTQRILSQ 220 >gi|254302994|ref|ZP_04970352.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323186|gb|EDK88436.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 264 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 7/191 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D K Sbjct: 8 IGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFVKN 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T Sbjct: 68 NCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKTTKNKNIAVISTKFTAES 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 N S+ ++ ++ + A +E G ++ +KE+ ++ + K TD Sbjct: 127 HGYKNKAKMLDSELNVKEIACIEFAQMIE---SGWDTFDN--RKELLNKYLSEIPKNTDT 181 Query: 195 IVLACTHYPLI 205 +VL CTHYPLI Sbjct: 182 LVLGCTHYPLI 192 >gi|326570331|gb|EGE20375.1| glutamate racemase [Moraxella catarrhalis BC1] Length = 285 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72 Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129 Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185 TL+ + +IH + +H +L VE G+ I D + K+ + + Sbjct: 130 TLQGQLLAQVIHKVATSKGITVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234 ++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234 >gi|319760706|ref|YP_004124644.1| glutamate racemase [Candidatus Blochmannia vafer str. BVAF] gi|318039420|gb|ADV33970.1| glutamate racemase [Candidatus Blochmannia vafer str. BVAF] Length = 281 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 11/225 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +++LI DSG+GGL + +R ++P +++Y+ D+ FPYGN + + +R++ + I Sbjct: 12 STVLILDSGVGGLFFYETVRRIVPFVNYLYLIDNKCFPYGNCSEKFIIQRVILIIERICR 71 Query: 74 KYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + L VIACNT A ++++ R FP +G VP I+ A T++G++ IL T Sbjct: 72 FLKFDLVVIACNTISVVALSILQINFR--FP---IIGVVPEIQLACQCTKNGVVGILGTC 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ Y N I + + +I L+ + L E G + + E+ + K Sbjct: 127 RTVNNKYIFNSIKRFAYKKNIVLLGTSRLVELAESKVYGNLVSKLELIDILNPWLNLK-- 184 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 K D IVL CTH+ + + + P +D+S+ + + LL Sbjct: 185 KIPDTIVLGCTHFSWLKSELQSVLPVDSCLIDSSNRLINHIKYLL 229 >gi|34762406|ref|ZP_00143407.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237742084|ref|ZP_04572565.1| glutamate racemase [Fusobacterium sp. 4_1_13] gi|256845420|ref|ZP_05550878.1| glutamate racemase [Fusobacterium sp. 3_1_36A2] gi|294785284|ref|ZP_06750572.1| glutamate racemase [Fusobacterium sp. 3_1_27] gi|27887931|gb|EAA24998.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229429732|gb|EEO39944.1| glutamate racemase [Fusobacterium sp. 4_1_13] gi|256718979|gb|EEU32534.1| glutamate racemase [Fusobacterium sp. 3_1_36A2] gi|294486998|gb|EFG34360.1| glutamate racemase [Fusobacterium sp. 3_1_27] Length = 264 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D K Sbjct: 8 IGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFVKN 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T Sbjct: 68 NCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKNTKNKNIAVISTKFTADS 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 N S+ ++ ++ + A +E G ++ +KE+ ++ + K TD Sbjct: 127 HGYKNKAKMLDSELNVKEIACIEFAQMIE---SGWDTFDN--RKELLNKYLSEIPKNTDT 181 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +VL CTHYPLI + + +D + I RA L +N Sbjct: 182 LVLGCTHYPLIRKDIEK--NIKIKVVDPAVEIVERATQTLSSLN 223 >gi|310659702|ref|YP_003937423.1| glutamate racemase [Clostridium sticklandii DSM 519] gi|308826480|emb|CBH22518.1| glutamate racemase [Clostridium sticklandii] Length = 274 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 12/236 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MK+ N K+ + I FDSGIGGL VL K +MP +IY AD PYG + A Sbjct: 1 MKMSN----KEERYKIGFFDSGIGGLTVLHKALEMMPLEDYIYYADTENQPYG-IKTKAE 55 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-- 118 + L+F D + V+ACNTA ++ ++LR + + +G PA+K A YT Sbjct: 56 VRELVFKAMDFIVSKNVKAIVVACNTATSVAIEDLRKKY-DIPIIGMEPAVKPAVRYTDI 114 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + + +T TL+ NLI + S+ + L+ L ++A + E I K Sbjct: 115 ENKKVLVTATKLTLKEEKLHNLISALDSESIVDLLELQELV----QFAERLDFDETRITK 170 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +E F E + K +VL CTH+ + ++L + +D ++ R + +L Sbjct: 171 YLENQFKEIDLKDYQTLVLGCTHFIFFKDMIQKLVTKEISIIDGNEGTIRHLQNIL 226 >gi|257454377|ref|ZP_05619640.1| glutamate racemase [Enhydrobacter aerosaccus SK60] gi|257448280|gb|EEV23260.1| glutamate racemase [Enhydrobacter aerosaccus SK60] Length = 289 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 18/241 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL ++ +P +IY+AD + PYG+ + +++ L L Sbjct: 9 IGVFDSGLGGLSVLTHLQRRLPFERYIYLADTLHVPYGSRSEAQIRE-LTLQAVAWLHSQ 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACN+A R +P + +G VPA+K A + + +++L+TPATL Sbjct: 68 GCKLIVIACNSASAHGLQAARRQYPQVPIVGLVPALKPAVMQSATKQVAVLATPATLHGY 127 Query: 136 YTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + +I Q +H S L VE G+ + +++ E + K+ D Sbjct: 128 LLNEVIEQVAKPQQVTVHKYSFNSLVPWVE---LGMPSHHPAV-TDLDHLLSELQDKKVD 183 Query: 194 VIVLACTHYPL--------IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQT 242 +VL CTH+P I + + V +D+ D+IA+R LL + N +H+ Sbjct: 184 QLVLGCTHFPFFKAYLAQRIDELMTHQAMGQVALIDSGDAIAKRVHDLLEQANQLASHKE 243 Query: 243 R 243 R Sbjct: 244 R 244 >gi|167590293|ref|ZP_02382681.1| glutamate racemase [Burkholderia ubonensis Bu] Length = 277 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 116/259 (44%), Gaps = 11/259 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +F+SG+GGL V++ +R +P +Y+AD PYG D ++ R L +D L + Sbjct: 12 IGVFNSGLGGLSVVEAIRQRLPGEALLYIADSRYAPYGEKSDAFIRARSQAL-TDWLVQN 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA T LR+ F ++ +G P IK A + S ++ +L+T ATLR Sbjct: 71 SAKMLVIACNTATTHAIAHLRTQF-AIPIIGVEPGIKPAMQASASKVVGVLATAATLRSQ 129 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ C + L R+E+ + I+ +E + D + Sbjct: 130 RLRALLAENDHACRFVCQAGHGLVERIEQGEAAGSV----IESLLEAYLTPMIDEGADTL 185 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL--- 252 VL THY L++ R++ ++ + +IARR L H + L L Sbjct: 186 VLGSTHYALLMPSIRRIFGSRFRLIETATAIARRVDHQLAEYRLHNDANPANAPLQLCST 245 Query: 253 --SGKPDIAMRRLMQGFGL 269 S + + RL QG L Sbjct: 246 ATSAEQRAPLARLAQGLAL 264 >gi|293610177|ref|ZP_06692478.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827409|gb|EFF85773.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 288 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 13/225 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L D L + Sbjct: 23 IGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQ 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT R Sbjct: 82 GCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRG 141 Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIK--KEIEGCFIEKEGK 190 +++ + + + ++S+ L VE G ++ E +K KE+ E + Sbjct: 142 QLIKDVVEKFAVPAGVKVMTLTSLELVPCVE---AGQQMGEACLKALKEVLQPAAE---Q 195 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 D +VL CTHYP + L +D+ ++AR+ AR L+ Sbjct: 196 GADYLVLGCTHYPFLNQAIHHLFDNQFTLVDSGLAVARQTARILI 240 >gi|326572368|gb|EGE22361.1| glutamate racemase [Moraxella catarrhalis BC7] Length = 285 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D Sbjct: 17 IGIFDSGVGGLSVYRHLAELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72 Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129 Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185 TL+ + +IH + +H +L VE G+ I D + K+ + + Sbjct: 130 TLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234 ++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234 >gi|154174379|ref|YP_001408311.1| glutamate racemase [Campylobacter curvus 525.92] gi|166231030|sp|A7GYL9|MURI_CAMC5 RecName: Full=Glutamate racemase gi|112803185|gb|EAU00529.1| glutamate racemase [Campylobacter curvus 525.92] Length = 266 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 28/237 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--------NWEDHALKKRLMFL 67 I IFDSG+GGL VL + +P F+Y AD PYG + HA+K FL Sbjct: 3 IGIFDSGLGGLSVLNEALKKLPNEEFLYYADRKNVPYGLKSKDEILKFSSHAVK----FL 58 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS--- 124 +D+ + VIACNTA + +ELR+ F + +G PA+K+AA + G S Sbjct: 59 ----IDQGANAI-VIACNTATSAAINELRAKF-DLPIIGMEPAVKKAADLNREGENSASL 112 Query: 125 ---ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++TP T++ LI S+ HLV + L R+ E+A DE+K+ + Sbjct: 113 RTLVIATPLTVQGAKLKELIERVDSE---HLVDVLAL-PRLVEFAENENFACDEVKEYLR 168 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 F + + + +VL CTH+ R++ P V +D ++ + L R+N Sbjct: 169 EEFAKFKLQNYCALVLGCTHFNYFKDSLREILPAGVSLIDGNEGTINKLISELSRLN 225 >gi|255321272|ref|ZP_05362438.1| glutamate racemase [Acinetobacter radioresistens SK82] gi|255301826|gb|EET81077.1| glutamate racemase [Acinetobacter radioresistens SK82] Length = 276 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 13/225 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL V Q++ +P +Y AD PYG D +++ L + L + Sbjct: 10 IGIFDSGIGGLSVAQEIARHLPHEQILYYADTAHVPYGPRSDQNIRE-LTAQAIEWLYRQ 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +V+ACNTA D LR + S +G VPA+K A +++ ++++L+TPAT R Sbjct: 69 GCKAAVVACNTASAFSLDYLRKHYGESFPIIGLVPALKPAVLQSKTKVVAVLATPATFRG 128 Query: 135 TYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKEDEIK--KEIEGCFIEKEGK 190 ++I + + + ++ + L VE+ G+++ + + K+I +E+ Sbjct: 129 NLIKDVIERFAMPTGVKVLPITCLELVPLVEQ---GLQMSQQCLNTLKKILQPVVEQGA- 184 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 D +VL CTHYP + + + + +D+ ++AR+ AR L+ Sbjct: 185 --DHLVLGCTHYPFLKPAIQAIFGQQLTLVDSGQAVARQTARILI 227 >gi|121730805|ref|ZP_01682883.1| ATPase of the AAA+ class [Vibrio cholerae V52] gi|121627620|gb|EAX60302.1| ATPase of the AAA+ class [Vibrio cholerae V52] Length = 129 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 2/122 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126 Query: 136 YT 137 YT Sbjct: 127 YT 128 >gi|256425483|ref|YP_003126136.1| glutamate racemase [Chitinophaga pinensis DSM 2588] gi|256040391|gb|ACU63935.1| glutamate racemase [Chitinophaga pinensis DSM 2588] Length = 272 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 9/239 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FDSG GGL VL+++ +P+Y +IY D+ PYGN + + + Sbjct: 1 MTGPIGVFDSGYGGLTVLKEIVATLPQYDYIYFGDNARAPYGNRGFDTIHTYTLQCVQHL 60 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 D P L ++ACNTA T+ + +L P LG + P + TQSG + I Sbjct: 61 FDMGCP-LVILACNTASARALRTIQQKDLPRIAPDRRVLGVIRPTTEMVGTLTQSGEVGI 119 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T T+ I+ + +H ++ + +E + + +KK ++ I Sbjct: 120 LATKGTVASESYPIEINKFFPHVKVHQLACPMWVPIIENGEADSEGADYFVKKYLDQ--I 177 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + D +VLACTHYP++ RQ P + L +A + L R + R+ Sbjct: 178 LTDAPDIDTLVLACTHYPILTKKIRQFLPGGITLLSQGKIVAHGLKDYLHRHPEMEVRL 236 >gi|325124352|gb|ADY83875.1| glutamate racemase [Acinetobacter calcoaceticus PHEA-2] Length = 288 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 13/225 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L D L + Sbjct: 23 IGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQ 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT R Sbjct: 82 GCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRG 141 Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIK--KEIEGCFIEKEGK 190 +++ + + + ++S+ L VE G ++ E +K KE+ E + Sbjct: 142 QLIKDVVEKFAVPAGVKVMTLTSLELVPCVE---AGQQMGEACLKALKEVLQPAAE---Q 195 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 D +VL CTHYP + L +D+ ++AR+ AR L+ Sbjct: 196 GADYLVLGCTHYPFLNQAIHHLFDNQFTLVDSGLAVARQTARILI 240 >gi|15896495|ref|NP_349844.1| glutamate racemase [Clostridium acetobutylicum ATCC 824] gi|20177983|sp|Q97E66|MURI_CLOAB RecName: Full=Glutamate racemase gi|15026324|gb|AAK81184.1|AE007821_1 Possible glutamate racemase [Clostridium acetobutylicum ATCC 824] gi|325510654|gb|ADZ22290.1| glutamate racemase [Clostridium acetobutylicum EA 2018] Length = 256 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GG+ VL++ +P +FIY D PYG ++ L F + L Sbjct: 5 NNPIGVIDSGVGGISVLKEAVKQLPYENFIYYGDSKNAPYGIKSVDEVR-NLTFNVVEKL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K V+ACNTA + DELR + ++ +G PA+K A + G I I++TP TL Sbjct: 64 LKLNIKALVVACNTATSAAIDELREKYKNIPVIGIEPALKPAVELKRRGKIIIMATPMTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 NL+ Y I + L +E+ GI ++ +++++ + F + E Sbjct: 124 SEVKFKNLMEKYEKDSEIVKLPCPGLVELIED---GI-VEGEKMQEYLRNKFKDYEKDDI 179 Query: 193 DVIVLACTHYPLI 205 VL CTHYP + Sbjct: 180 AAFVLGCTHYPFV 192 >gi|296112421|ref|YP_003626359.1| glutamate racemase MurI [Moraxella catarrhalis RH4] gi|295920115|gb|ADG60466.1| glutamate racemase MurI [Moraxella catarrhalis RH4] Length = 285 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 76/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72 Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + L +IACN +A++L +R P +G VPA+K A +Q+ I++L+T A Sbjct: 73 CRQGCKLIIIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129 Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185 TL+ + +IH + +H +L VE G+ I D + K+ + + Sbjct: 130 TLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234 ++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234 >gi|262380044|ref|ZP_06073199.1| glutamate racemase [Acinetobacter radioresistens SH164] gi|262298238|gb|EEY86152.1| glutamate racemase [Acinetobacter radioresistens SH164] Length = 289 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 13/225 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL V Q++ +P +Y AD PYG D +++ L + L + Sbjct: 23 IGIFDSGIGGLSVAQEIARHLPHEQILYYADTAHVPYGPRSDQNIRE-LTAQAIEWLYRQ 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +V+ACNTA D LR + S +G VPA+K A +++ ++++L+TPAT R Sbjct: 82 GCKAAVVACNTASAFSLDYLRKHYGESFPIIGLVPALKPAVLQSKTKVVAVLATPATFRG 141 Query: 135 TYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKEDEIK--KEIEGCFIEKEGK 190 ++I + + + ++ + L VE+ G+++ + + K+I +E+ Sbjct: 142 NLIKDVIERFAMPTGVKVLPITCLELVPLVEQ---GLQMSQQCLNTLKKILQPVVEQGA- 197 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 D +VL CTHYP + + + + +D+ ++AR+ AR L+ Sbjct: 198 --DHLVLGCTHYPFLKPAIQAIFGQQLTLVDSGQAVARQTARILI 240 >gi|167752024|ref|ZP_02424151.1| hypothetical protein ALIPUT_00266 [Alistipes putredinis DSM 17216] gi|167660265|gb|EDS04395.1| hypothetical protein ALIPUT_00266 [Alistipes putredinis DSM 17216] Length = 255 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/242 (30%), Positives = 115/242 (47%), Gaps = 32/242 (13%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P + ++DSG+GGL V +++R +PE +Y+ D PYG + Sbjct: 1 MDNRP--------VGVYDSGLGGLTVWREIRRQLPEESLVYLGDGKNCPYGARPADEIC- 51 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 RL L + V+ACNTA D LR + M +G PA+K A T+SG+ Sbjct: 52 RLADEAVGRLVGAGCKMVVVACNTATAAAIDFLRRKYRQMPIVGMEPAVKPACLNTRSGV 111 Query: 123 ISILSTPATL-----RRT---YTSNL-IHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 + +L+T +L RRT Y N+ + + V + + L VEE Sbjct: 112 VGVLATARSLDGDLFRRTAARYGENIRVLTAVGEGFVEL---------VEEDREQSPEAV 162 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ-LSPWPVDWLDNSDSIARRARC 232 + +++ +E +EG D IVL CTHYP ++ VFRQ + V +D S ++ RR Sbjct: 163 ETVRRVLEPMI--REG--ADQIVLGCTHYPFLLPVFRQVIGERGVAVVDPSPAVGRRVGQ 218 Query: 233 LL 234 LL Sbjct: 219 LL 220 >gi|238799428|ref|ZP_04642856.1| Glutamate racemase [Yersinia mollaretii ATCC 43969] gi|238716722|gb|EEQ08610.1| Glutamate racemase [Yersinia mollaretii ATCC 43969] Length = 211 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 4/208 (1%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 M + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ Sbjct: 1 MDIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVG 59 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+T T+ +YT +LI + + C I L+ S L E G + + +KK + Sbjct: 60 LLATRGTVHASYTLDLIARFATDCKIELLGSSELVELAETKLHGGVVPVEALKKILHPWL 119 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + Sbjct: 120 AMREPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSSQ 177 Query: 245 FDDHALFLSGKPDI-AMRRLMQGFGLKS 271 ++ A ++ D A+ ++QG+G + Sbjct: 178 DENMAYCMALNVDTDALLPVLQGYGFPT 205 >gi|260549201|ref|ZP_05823422.1| glutamate racemase [Acinetobacter sp. RUH2624] gi|260407929|gb|EEX01401.1| glutamate racemase [Acinetobacter sp. RUH2624] Length = 288 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 9/223 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGG+ V ++ +P H +Y AD PYG D +++ L D L + Sbjct: 23 IGIFDSGIGGMSVAAEIARYLPNEHIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQ 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT R Sbjct: 82 GCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRG 141 Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +++ + + + ++++ L VE + + +K+ ++ + Sbjct: 142 QLIKDVVEKFAVPAGVKVMTLTNLELVPCVEAGQQMSPVCLNALKEVLQ----PAADQGA 197 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 D +VL CTHYP + L +D+ ++AR+ AR L+ Sbjct: 198 DYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILI 240 >gi|251778481|ref|ZP_04821401.1| glutamate racemase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082796|gb|EES48686.1| glutamate racemase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 258 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 5/233 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I FDSG+GGL V+++ LMP ++IY D PYG ++ Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAICLMPNENYIYFGDSKNAPYGIKTVEEVRTLTFNAVES 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L++ + V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP Sbjct: 63 LLEQNVKAI-VVACNTATSAAIDLVRSKYKNIPIIGIEPALKLATKYNRKGNIIIMATPM 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL+ +L+ Y I S+ A VE GI + +E+++ ++ F + Sbjct: 122 TLKEKKFKSLMEKYGENYDI---VSLPCAKLVEFIEHGI-LNGEELEEYLKEKFKSYKNN 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 V+VL CTHYP I ++ + +D ++ R L N T Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTE 230 >gi|229830192|ref|ZP_04456261.1| hypothetical protein GCWU000342_02301 [Shuttleworthia satelles DSM 14600] gi|229791490|gb|EEP27604.1| hypothetical protein GCWU000342_02301 [Shuttleworthia satelles DSM 14600] Length = 258 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 106/225 (47%), Gaps = 16/225 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL+++ LMP F+Y D PYG E +++ + ++++ Sbjct: 9 IAVFDSGMGGISVLRELVKLMPREDFLYFGDSKNAPYGTRELPEIQELTIRNIQHLMNRG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++V ACNTA + +LR +P+ +G PA+K A G + +++TP T+R Sbjct: 69 CKAVAV-ACNTATSAAVRKLREMYPNFPIVGIEPAVKPACMENPGGKVLVMATPMTVRLG 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK---EGKRT 192 L + I +S L VEE D+ + + F+E+ + Sbjct: 128 KLHLLCERFRHVAQIETLSCPGLMEFVEE-------GRDQTPELMH--FLEELLAPYRDV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 D +VL CTHYP + ++L V D + AR LL RI Sbjct: 179 DAVVLGCTHYPFVRKQVQELMGASVKIYDGAAGTARE---LLRRI 220 >gi|295399429|ref|ZP_06809411.1| glutamate racemase [Geobacillus thermoglucosidasius C56-YS93] gi|312110012|ref|YP_003988328.1| glutamate racemase [Geobacillus sp. Y4.1MC1] gi|294978895|gb|EFG54491.1| glutamate racemase [Geobacillus thermoglucosidasius C56-YS93] gi|311215113|gb|ADP73717.1| glutamate racemase [Geobacillus sp. Y4.1MC1] Length = 264 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I + DSG+GGL V +++ +P+ +Y+ D PYG + +++ + ++ Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKERIVYLGDTARCPYGPRPEEEIRQ-FTWEMTNY 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + VIACNTA ++ DE+R + LG V P + A T++G I ++ T Sbjct: 60 LLQYNIKMLVIACNTATAVVLDEIREQL-DIPVLGVVHPGARAALKATKNGHIGVIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + H+ ++ VE + +E KK + + Sbjct: 119 TVKSGAYEKALKSINPRVHVESLACPKFVPLVESG----NFEGEEAKKIVAESLEPFKSS 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 DV++L CTHYPL+ + ++ V + + D AR +L + T + +H Sbjct: 175 NMDVLILGCTHYPLLSPLIKEYMGKRVKLICSGDETAREVSAILHHSHLLYTGQRAAEHL 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G ++ + + FG Sbjct: 235 FFTTGPKELFQKIASKWFG 253 >gi|168217333|ref|ZP_02642958.1| glutamate racemase [Clostridium perfringens NCTC 8239] gi|182380603|gb|EDT78082.1| glutamate racemase [Clostridium perfringens NCTC 8239] Length = 260 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 12/231 (5%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F + Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIR-SLSFNAIE 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L K VIACNTA + +LR + + +G PA+K A ++G + +++T A Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187 TL + L+ Y + + L +E ++ +++K +E ++++ Sbjct: 124 TLTQEKFKKLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDR 179 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 E IVL CTHYP + V + + VD +D S R + L N Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENN 227 >gi|225017223|ref|ZP_03706415.1| hypothetical protein CLOSTMETH_01149 [Clostridium methylpentosum DSM 5476] gi|224949998|gb|EEG31207.1| hypothetical protein CLOSTMETH_01149 [Clostridium methylpentosum DSM 5476] Length = 268 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 20/254 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 ++I IFDSG+GGL V+++++ ++P + +Y D PYG + K+ L FL Sbjct: 3 NSAIGIFDSGVGGLTVVKELKRILPHENLVYFGDTGRVPYGTRSRQTIIDYAKQDLSFLK 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLISILS 127 S + +++ AC T ++ +E+ P + G +PA++ A + T SG I +L Sbjct: 63 SKEIK-----MAIAACGTVSAVLPNEIIDELP-FPYTGVLLPAVQTACSKTISGHIGVLG 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+R I + + I + + VE G +++++ + + ++++ Sbjct: 117 TSATIRSGAYGKAIRTILPNARITGIPCPLFVPLVEN---GYVQRDNQVTRLVAQDYLKQ 173 Query: 188 E-GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTR 243 G D ++L CTH+PL+ + + V +D AR A +L +NT + R Sbjct: 174 VLGSDIDTLILGCTHFPLLKAIIGDIVGPDVRLIDPGRETARFAASVLTSEGLLNTQEER 233 Query: 244 VFDDHALFLSGKPD 257 ++ F+S P+ Sbjct: 234 --GSYSFFVSDSPE 245 >gi|313159357|gb|EFR58721.1| glutamate racemase [Alistipes sp. HGB5] Length = 257 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 6/226 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I ++DSG+GGL V +++R ++P +Y+ D PYG+ +++ + ++ + Sbjct: 6 IGVYDSGLGGLTVWREVRRMLPSESLVYLGDGKNCPYGSRPREEVRRLADEAVASLVAQG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA D LR + M +G PA+K A T+SG++ +L+T +L Sbjct: 66 CKMV-VVACNTATAAAIDFLREKYAPMPIVGMEPAVKPACLNTRSGVVGVLATERSLDGE 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y S + VE E ++ + + + G D I Sbjct: 125 LFRRTAAKYGSGVELITAPGRGFVELVESDRESTPEAEQAVRDAV--AVMLEHG--ADQI 180 Query: 196 VLACTHYPLIVHVF-RQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 VL CTHYP ++ V R ++ V+ +D S ++ARR LL + H Sbjct: 181 VLGCTHYPFLLPVLERVVAGRGVEIVDPSPAVARRVVQLLDQYGLH 226 >gi|326316343|ref|YP_004234015.1| glutamate racemase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373179|gb|ADX45448.1| Glutamate racemase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 288 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 12/237 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ +R +P F+Y+AD PYG D + R + + + Sbjct: 6 QRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGHAPYGERGDAYVAARTHAITTYLQ 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNTA E+R+ + +G PA+K A A T++G + ++ T TL Sbjct: 66 QTHGIKALVVACNTATAAAIHEVRARHAGLPLVGVEPALKPALALTRTGRVGVIGTRGTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182 L S + LA +E + + EI G Sbjct: 126 ASAKFQRLQASLQGAVEFVVQPCDGLAHAIERSTADTQ-PDAPATAEIRALCARYTAALG 184 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 F G+ D +VL CTHY + R + V ++ + +AR+ R LL T Sbjct: 185 PFGTAPGE-IDTLVLGCTHYIFAENALRAHTGPHVRLVETGEPVARQTRRLLEAAGT 240 >gi|291562561|emb|CBL41377.1| glutamate racemase [butyrate-producing bacterium SS3/4] Length = 275 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 24/237 (10%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M DN P I + DSG+GG+ VL+++ LMP F+Y D PYG + Sbjct: 18 MNTDNRP--------IGVLDSGLGGISVLRELVKLMPGEAFLYYGDSANAPYGTRTPEEV 69 Query: 61 ----KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS--MAFLGAVPAIKQA 114 KK + FL L++ + V+ACNTA ++ ELR + + +G PA+K A Sbjct: 70 IDLTKKDVDFL----LERGAKAI-VVACNTATSVAIRELREEYEKKDIPVIGIEPALKPA 124 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 + + +++TP TL +T ++++H Y + +I + L EY G ++ Sbjct: 125 VLAKEHSKVVVMATPMTLSQTKFNSMLHVYEDEANIIKMPCPGLV----EYIEGGMLEGP 180 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 + + +E F E D +VL CTHYPL+ ++ P V D A++ R Sbjct: 181 VLDEYLEKQFEPYEKSEIDAVVLGCTHYPLVKDEIQKHLPG-VAIYDGGFGTAKQTR 236 >gi|120434578|ref|YP_956873.1| glutamate racemase [Gramella forsetii KT0803] gi|117576728|emb|CAL65197.1| glutamate racemase [Gramella forsetii KT0803] Length = 264 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 6/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG + +++ L+P + IY++D PYG + +L ++ L K Sbjct: 7 IGIFDSGVGGTSIWKEIHRLLPLENTIYLSDSRNAPYGIKTQEKII-QLSIKNTEKLLKL 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA T LRS + + A +G PAIK AA + + I IL+T TL Sbjct: 66 DCKLIVVACNTATTNAIRILRSAYKT-AIIGIEPAIKPAALKSANKAIGILATRGTLTSE 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + Y ++ V L +E K DE KK + G + D + Sbjct: 125 LFAQTSELYTRDINVIEVEGNGLVELIENG----KKDADETKKLLLGLLDPMLKAKIDYL 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL C+HYP ++ + ++ P V +D+ +++AR+ + +L Sbjct: 181 VLGCSHYPYLIPLLEEILPPEVKIIDSGEAVARQTKNIL 219 >gi|228471912|ref|ZP_04056682.1| glutamate racemase [Capnocytophaga gingivalis ATCC 33624] gi|228276764|gb|EEK15470.1| glutamate racemase [Capnocytophaga gingivalis ATCC 33624] Length = 260 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 7/224 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG + +++ +P +Y+AD + PYG + +LD + Sbjct: 5 IGLFDSGVGGTTIWREVVRQLPWESTLYLADSLNAPYGEKSSEEIIALCEKNTEYLLDHH 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ ++ACNTA T LR+ + + F+G PAIK A Y+Q+ I +L+T +TL+ Sbjct: 65 SKLI-IVACNTATTNAITHLRAKY-KVPFIGIEPAIKPAGLYSQTKTIGVLATQSTLKSA 122 Query: 136 YTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + +N + + ++ + L +EE KI E+ +E + D Sbjct: 123 FFANTCQQLLDKGINVLKQEGIGLVPLIEEG----KIDTPEMMALLEQYLRPMVAEGMDY 178 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +VL CTHYP + + ++ P V +D++ ++A++ +L + N Sbjct: 179 LVLGCTHYPYLTSLISEILPENVRIMDSAQAVAKQTERILSQNN 222 >gi|262370036|ref|ZP_06063363.1| glutamate racemase [Acinetobacter johnsonii SH046] gi|262315075|gb|EEY96115.1| glutamate racemase [Acinetobacter johnsonii SH046] Length = 289 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 116/237 (48%), Gaps = 18/237 (7%) Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K N+ I IFDSGIGGL + Q++ +P FIY AD PYG +D +++ L Sbjct: 13 PMPKATANAPIGIFDSGIGGLSIAQEIAKHLPHERFIYFADTAHVPYGPRDDQNIRE-LT 71 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLIS 124 + L + ++V+ACNTA D LR + + +G VPA+K A ++S ++ Sbjct: 72 AQAIEWLYRQGCKVAVVACNTASAFSLDYLREHYGDNFPIIGLVPALKPAVLQSKSKTVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMIL------ASRVEEYACGIKIKEDEIKK 178 +L+TPAT R +++ + + ++ L S + A + +D ++ Sbjct: 132 VLATPATFRGQLIKDVVDKFAQPSGVTVIPVTCLDLVPFVESGAQMSAACLATLKDILQP 191 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 ++ + D +VL CTHYP + + + + +D+ ++AR+ AR L+ Sbjct: 192 VVD--------QGADYLVLGCTHYPFLKIAIQSIFGQKLTLIDSGLAVARQTARILI 240 >gi|134296381|ref|YP_001120116.1| glutamate racemase [Burkholderia vietnamiensis G4] gi|134139538|gb|ABO55281.1| glutamate racemase [Burkholderia vietnamiensis G4] Length = 286 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + + Sbjct: 17 IGIFDSGLGGLSVLRAVRAQLPGESFVYVADSRHAPYGPRDEAFITERTLAICEWLARDG 76 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R S+ +G P IK AAA + +G+ +L+T +TL Sbjct: 77 AKAL-VVACNTATARAIAAVRERL-SIPLVGVEPGIKPAAAVSATGVAGVLATQSTLNSP 134 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ Y + L +E ++ +E D + Sbjct: 135 RFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRALLERYLQPMIDAGADTL 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 VL CTHYP R L + +D SD+IAR+ AR L Sbjct: 191 VLGCTHYPFFTAAIRDLVGDRLTIVDTSDAIARQLARVL 229 >gi|88810229|ref|ZP_01125486.1| glutamate racemase [Nitrococcus mobilis Nb-231] gi|88791859|gb|EAR22969.1| glutamate racemase [Nitrococcus mobilis Nb-231] Length = 284 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 10/220 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V+ +R L+P +YVAD PYG ++ R + L + L Sbjct: 7 DPIGIFDSGLGGLSVVHAIRRLLPTEQLLYVADCAHAPYGGCSAAFIRTRALAL-AGFLQ 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA + LR F + + PA+K+AAA T+ ++ +L+T TL Sbjct: 66 TQRAKALVVACNTATAAAAEALRRQF-ELPIIAMEPAVKRAAAATRCNVVGVLATEGTLA 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG--CFIEKEGKR 191 + L+ + + + L VE +I E + +E ++ +G Sbjct: 125 SARFAGLLARFAGAVQVVTRPAPDLVLLVERG----EIDGIEAMRRVEAHVSYLLHQG-- 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +D IVL CTHYP + + + + + +D ++AR R Sbjct: 179 SDTIVLGCTHYPHLRPLIERAAGPEIAIIDTGPAVARELR 218 >gi|310641323|ref|YP_003946081.1| glutamate racemase [Paenibacillus polymyxa SC2] gi|309246273|gb|ADO55840.1| Glutamate racemase [Paenibacillus polymyxa SC2] Length = 269 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 73/270 (27%), Positives = 119/270 (44%), Gaps = 30/270 (11%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +I I DSG+GGL V++++ +P IY D PYG +KK D Sbjct: 1 MQQAIAILDSGVGGLTVVKEVMRQLPREKIIYFGDTARTPYGPRPSEEVKK-FTEQMVDF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L ++ P + +IACNTA T E S S+ +G + P + A + T +G + ++ T Sbjct: 60 LIQFNPKVIIIACNTA-TAAALEYISQKVSIPVIGVIHPGARAAISATATGYVGVIGTVG 118 Query: 131 TLRR-TYTSNL--------IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 T+R YT+ L + S+ + LV + S+ +E + I+ Sbjct: 119 TIRSGAYTTALKQLSPYVDVVSHACPALVPLVEQGLFRSKTTSQVV------EESLRPIQ 172 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 I D ++L CTHYP + +++ V + ++D AR +L N + Sbjct: 173 TYPI-------DCLILGCTHYPFLRETIQEVMGPAVKLISSADETARETSTIL--YNKGK 223 Query: 242 TRVFDD---HALFLSGKPDIAMRRLMQGFG 268 D+ H LF SG P++ R Q G Sbjct: 224 LEAGDETPVHQLFCSGDPELFQRIAAQWLG 253 >gi|238561735|ref|ZP_00441552.2| glutamate racemase [Burkholderia mallei GB8 horse 4] gi|254203335|ref|ZP_04909696.1| glutamate racemase [Burkholderia mallei FMH] gi|254205214|ref|ZP_04911567.1| glutamate racemase [Burkholderia mallei JHU] gi|147745574|gb|EDK52653.1| glutamate racemase [Burkholderia mallei FMH] gi|147754800|gb|EDK61864.1| glutamate racemase [Burkholderia mallei JHU] gi|238523998|gb|EEP87433.1| glutamate racemase [Burkholderia mallei GB8 horse 4] Length = 302 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 17/244 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+ +R + + +YVAD PYG +D + +R + + ++ Sbjct: 27 RAPIGVFDSGLGGLSVLRAVRERLLDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 86 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL Sbjct: 87 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 144 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ + + C L +E G + +E + G Sbjct: 145 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--A 200 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP + R ++ + +D D+IAR RV D+ L Sbjct: 201 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 249 Query: 253 SGKP 256 P Sbjct: 250 PASP 253 >gi|328947305|ref|YP_004364642.1| glutamate racemase [Treponema succinifaciens DSM 2489] gi|328447629|gb|AEB13345.1| Glutamate racemase [Treponema succinifaciens DSM 2489] Length = 278 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 20/223 (8%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG GG+ + ++ PE +Y+ D V FPYG + + ILD + P Sbjct: 10 LDSGTGGIPYMLSLKEKSPESRCVYLGDTVHFPYGEKSEEEVTLCASESIEKILDLWNPR 69 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 + VIACNT ++LR FP + +G VPAIK AA T++ I +L+T AT++ Y Sbjct: 70 IVVIACNTISVTALNQLRERFPDVPIVGTVPAIKLAAKVTKNKKIGLLATNATVKHPYCK 129 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEIKKEIE-----GCFIEKEGKR 191 L+ + S + L + +E + + + +K ++ GC Sbjct: 130 KLVSDFASGYEVFNRGDPDLITFIEHDLFYASKEERTAAVKPAVDFFCSCGC-------- 181 Query: 192 TDVIVLACTHYPL----IVHVFRQLSPWPVDWLDNSDSIARRA 230 D I+L CTH+ I F ++ V +D+ D ++ A Sbjct: 182 -DTIILGCTHFTHMAEDIKEYFSTVAGKKVFVVDSRDGVSNHA 223 >gi|212703906|ref|ZP_03312034.1| hypothetical protein DESPIG_01959 [Desulfovibrio piger ATCC 29098] gi|212672609|gb|EEB33092.1| hypothetical protein DESPIG_01959 [Desulfovibrio piger ATCC 29098] Length = 276 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 2/213 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ + +P + +Y+ D PYG + + + ++D+ Sbjct: 9 IGIFDSGMGGLTVLKAISGRLPGENLLYLGDTARLPYGTKSRDTIIRYTLKAAGRLVDEG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 +L V+ACNTA + ELR F + LG V P + A A +++ I +++T AT+ Sbjct: 69 VKML-VVACNTATSAALPELREHFAPLPVLGVVRPGAEAAVAASRNKRIVVIATEATIAG 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I S + + + + EE I E + + F + R D Sbjct: 128 GAYQQAIASLCPEARVQGRACTLFVPLAEEGWMDGPIVEGIASRYLGDLFSPERPDRPDT 187 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 +VL CTH+PL R + V +D++++ A Sbjct: 188 LVLGCTHFPLFREALRHVVGEDVRIVDSAETAA 220 >gi|21673123|ref|NP_661188.1| glutamate racemase [Chlorobium tepidum TLS] gi|25453118|sp|Q8KFN8|MURI_CHLTE RecName: Full=Glutamate racemase gi|21646198|gb|AAM71530.1| glutamate racemase [Chlorobium tepidum TLS] Length = 272 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 6/222 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSGIGGL V++ ++ +P IY D PYG+ ++K +++L Sbjct: 10 SPIGIFDSGIGGLTVVKAVQAALPSERIIYFGDTARVPYGSKSQVTIRKYARE-DTELLM 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPATL 132 K+QP L ++ACNT L D + T + +G + A + A T+SG I ++ T AT+ Sbjct: 69 KHQPKLIIVACNTVSALALDVVEQTAGGIPVIGVLKAGAELAVQKTKSGRIGVIGTQATI 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I + + + EE I + E GK Sbjct: 129 GSNAYTCAIREEKETLEVFPKACPLFVPLAEEGF----IDHPATRLVAEEYLAAFTGKEI 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYP++ + ++ + +D+++++A +A LL Sbjct: 185 DTLVLGCTHYPILRKIIESITGPEITIIDSAEAVASKAGELL 226 >gi|53716293|ref|YP_106352.1| glutamate racemase [Burkholderia mallei ATCC 23344] gi|121598002|ref|YP_990396.1| glutamate racemase [Burkholderia mallei SAVP1] gi|124381855|ref|YP_001024891.1| glutamate racemase [Burkholderia mallei NCTC 10229] gi|126446746|ref|YP_001079232.1| glutamate racemase [Burkholderia mallei NCTC 10247] gi|167002077|ref|ZP_02267867.1| glutamate racemase [Burkholderia mallei PRL-20] gi|254176068|ref|ZP_04882726.1| glutamate racemase [Burkholderia mallei ATCC 10399] gi|254356026|ref|ZP_04972303.1| glutamate racemase [Burkholderia mallei 2002721280] gi|52422263|gb|AAU45833.1| glutamate racemase [Burkholderia mallei ATCC 23344] gi|121225800|gb|ABM49331.1| glutamate racemase [Burkholderia mallei SAVP1] gi|126239600|gb|ABO02712.1| glutamate racemase [Burkholderia mallei NCTC 10247] gi|148025009|gb|EDK83178.1| glutamate racemase [Burkholderia mallei 2002721280] gi|160697110|gb|EDP87080.1| glutamate racemase [Burkholderia mallei ATCC 10399] gi|243062233|gb|EES44419.1| glutamate racemase [Burkholderia mallei PRL-20] gi|261826533|gb|ABM98669.2| glutamate racemase [Burkholderia mallei NCTC 10229] Length = 290 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 17/244 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+ +R + + +YVAD PYG +D + +R + + ++ Sbjct: 15 RAPIGVFDSGLGGLSVLRAVRERLLDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 74 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL Sbjct: 75 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ + + C L +E G + +E + G Sbjct: 133 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--A 188 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP + R ++ + +D D+IAR RV D+ L Sbjct: 189 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 237 Query: 253 SGKP 256 P Sbjct: 238 PASP 241 >gi|295132492|ref|YP_003583168.1| glutamate racemase [Zunongwangia profunda SM-A87] gi|294980507|gb|ADF50972.1| glutamate racemase [Zunongwangia profunda SM-A87] Length = 263 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 12/233 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFS 69 +NSI IFDSGIGG + +++ L+P +Y+AD PYG E L ++ Sbjct: 3 KNSIGIFDSGIGGTSIWREIHELLPFEDTVYLADSFNAPYGIKTREEIIELSRKNTIKLL 62 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++ K + V+ACNTA T +ELR+ F ++F+G PAIK AA +++ I IL+T Sbjct: 63 ELGAK----IIVVACNTATTNAINELRNEF-DVSFIGIEPAIKPAALQSRTKNIGILATK 117 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TL + + Y + V L +E KI E+ ++ Sbjct: 118 GTLSSSLFTKTSDLYTQGLKVIEVEGNGLVELIE----AGKIYSTEMDLLLDQLLAPLIS 173 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL C+HYP ++ ++ + +D+ +++AR+ + +L + N T Sbjct: 174 QPIDYLVLGCSHYPYLIPRLKEKFHPALSIIDSGEAVARQTKAILEKENLLNT 226 >gi|299771738|ref|YP_003733764.1| glutamate racemase [Acinetobacter sp. DR1] gi|298701826|gb|ADI92391.1| glutamate racemase [Acinetobacter sp. DR1] Length = 288 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 19/228 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L D L + Sbjct: 23 IGIFDSGIGGMSVAAEIARYLPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQ 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT R Sbjct: 82 GCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRG 141 Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEE-----YACGIKIKEDEIKKEIEGCFIEK 187 +++ + + + ++S+ L VE AC +KE +G Sbjct: 142 QLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMGEACLTALKEVLQPAAEQG----- 196 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 D +VL CTHYP + L +D+ ++AR+ AR L+ Sbjct: 197 ----ADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGFAVARQTARILI 240 >gi|254520425|ref|ZP_05132481.1| glutamate racemase [Clostridium sp. 7_2_43FAA] gi|226914174|gb|EEH99375.1| glutamate racemase [Clostridium sp. 7_2_43FAA] Length = 257 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 13/227 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GGL V+++ +MP ++IY D PYG ++ +L+K Sbjct: 8 IGFFDSGVGGLSVMKEAIQVMPNENYIYFGDSKNAPYGVKSVEEVRDLTFKAVEFLLNKG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ IACNTA + +LR +P + +G PA+K A + G I I++T TL+ Sbjct: 68 VKGIA-IACNTATSAAVADLRKIYPDLPLVGIEPALKPAVELNKDGNILIMATSMTLKEE 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK----EGKR 191 + L++ Y + I V L +E KE+E EK G + Sbjct: 127 KFNRLMNRYKDRASIIPVPCPGLVEFIEAGKLD--------GKEVEEYLFEKVNTYNGGK 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 IVL CTHYP I ++ + +D A+ R L N Sbjct: 179 IASIVLGCTHYPFIKDTLVKIIGKDITIIDGGLGTAKELRRRLSEKN 225 >gi|258647676|ref|ZP_05735145.1| glutamate racemase [Prevotella tannerae ATCC 51259] gi|260852505|gb|EEX72374.1| glutamate racemase [Prevotella tannerae ATCC 51259] Length = 285 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 112/235 (47%), Gaps = 9/235 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GG+ +L++ + L+P+Y ++Y+ D+ PYG+ + + + + + Sbjct: 12 IGVFDSGYGGMTILRQFKRLLPQYDYLYLGDNARAPYGSHSFEVIYQYTLEAVEALFKRG 71 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 P L ++ACNTA TL +++L + +P LG + P ++ A TQS I +L T Sbjct: 72 CP-LVILACNTASAKALRTLQQNDLPARYPDRRVLGVIRPTVETVAGLTQSHHIGLLGTV 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ + + ++ + VE Y + ++K ++ F + Sbjct: 131 GTISSGSYTMEFAKIDPSAKLTGMACPMWVPLVENYEFDSPGADYFVRKRLDALF--ESD 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + D ++L CTHYPL++ Q +P V ++ +A + + L R + R+ Sbjct: 189 PQIDTLILGCTHYPLLLEKISQFTPPNVKIVEQGAYVAEKLQDYLQRHPEMEVRL 243 >gi|323699601|ref|ZP_08111513.1| glutamate racemase [Desulfovibrio sp. ND132] gi|323459533|gb|EGB15398.1| glutamate racemase [Desulfovibrio desulfuricans ND132] Length = 279 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 6/217 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + ++++ + Sbjct: 9 IGMFDSGVGGLTVLKALRERMPCEDVLYLGDTARLPYGTKSPQTVTRYGVQCGAELIKRG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 +L V+ACNTA + D LR P + +G V P + A T + +++++T +T+ Sbjct: 69 IKLL-VVACNTASAVALDALREANPGVPVIGVVDPGARAACQATTNQAVAVIATESTIAG 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR--- 191 IH+ Q I + + EE + E + ++ F G Sbjct: 128 GAYQRAIHAINPQARILGHPCPLFVALAEEGWTDGHVPEAVAARYLDPIFKPASGTEHPV 187 Query: 192 -TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTH+PL+ R + P +D++ + A Sbjct: 188 IPDTLVLGCTHFPLLAPAIRNVVPEHTTIVDSAATTA 224 >gi|120610174|ref|YP_969852.1| glutamate racemase [Acidovorax citrulli AAC00-1] gi|120588638|gb|ABM32078.1| glutamate racemase [Acidovorax citrulli AAC00-1] Length = 296 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ +R +P F+Y+AD PYG D + R + + Sbjct: 6 QRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGNAPYGERGDAYVAARTHAIAGYLQ 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNTA E+R+ + +G PA+K A + T++G + ++ T TL Sbjct: 66 RTHGIKALVVACNTATAAAIHEVRARHADLPLVGVEPALKPALSLTRTGRVGVIGTRGTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182 L S + LA +E + + +D EI G Sbjct: 126 SSAKFQRLRASLQGPVEFVVQPCDGLAHAIER-STADTLPDDPATAEIRALCARYMAALG 184 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 F G+ D +VL CTHY R + V ++ + +AR+ R Sbjct: 185 PFGAAPGE-IDTLVLGCTHYLFAEDALRAHTGPQVRLVETGEPVARQTR 232 >gi|308068443|ref|YP_003870048.1| glutamate racemase [Paenibacillus polymyxa E681] gi|305857722|gb|ADM69510.1| Glutamate racemase [Paenibacillus polymyxa E681] Length = 271 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 30/270 (11%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +I I DSG+GGL V++++ +P IY D PYG +KK D Sbjct: 3 VQQAIAILDSGVGGLTVVKEVMRQLPREKIIYFGDTARTPYGPRPSEEVKK-FTEQMVDF 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L ++ P + +IACNTA D + S+ +G + P + A + T +G + ++ T Sbjct: 62 LIQFDPKVIIIACNTATAAALDYISQKV-SIPVIGVIHPGARAAISATATGHVGVIGTVG 120 Query: 131 TLRR-TYTSNL--------IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 T+R YT+ L + S+ + LV + S+ +E + I+ Sbjct: 121 TIRSGAYTAALKQLSPYVDVVSHACPALVPLVEQGLFRSKTTSQVV------EETLRPIQ 174 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 I D ++L CTHYP + +++ V + ++D AR +L N + Sbjct: 175 TYPI-------DCLILGCTHYPFLKETIQEVMGPAVKLISSADETARETSTIL--YNKGK 225 Query: 242 TRVFDD---HALFLSGKPDIAMRRLMQGFG 268 D+ H LF SG P++ R Q G Sbjct: 226 LEAGDETPVHQLFCSGDPELFQRIAAQWLG 255 >gi|292669543|ref|ZP_06602969.1| glutamate racemase [Selenomonas noxia ATCC 43541] gi|292648752|gb|EFF66724.1| glutamate racemase [Selenomonas noxia ATCC 43541] Length = 262 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 9/218 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL R ++P F++ AD PYG A++ + F ++++ Sbjct: 3 IALFDSGIGGLTVLSHARRVLPSEDFLFFADRDHVPYGTKSVPAVRGFVREAFHFLVEQQ 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA ++ DE+R + ++ +G PA+K+A + + +TP T+ Sbjct: 63 KADTVVVACNTATSVAVDEMRRLY-AVPIIGMEPAVKKALERDTERRVLVTATPITVNGE 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI +Y + I L++ R+ E+A + ++ + + I Sbjct: 122 KLRRLISAYDTGGCIDLLA----LPRLVEFAEEREFVSPRVENYLRSALAPYDLINYSAI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDS----IARR 229 VL CTH+ RQ+ P V ++D ++ +ARR Sbjct: 178 VLGCTHFNYFKDTLRQIMPQTVGFVDGNEGTVEELARR 215 >gi|169634511|ref|YP_001708247.1| glutamate racemase [Acinetobacter baumannii SDF] gi|239500887|ref|ZP_04660197.1| glutamate racemase [Acinetobacter baumannii AB900] gi|169153303|emb|CAP02411.1| glutamate racemase [Acinetobacter baumannii] gi|193076216|gb|ABO10839.2| glutamate racemase [Acinetobacter baumannii ATCC 17978] Length = 288 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 10/233 (4%) Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K L ++ I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LT 71 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124 D L + ++V+ACNTA D LR + +G VPA+K A T+S +++ Sbjct: 72 ARAVDWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+TPAT R +++ + + + ++S+ L VE + + +++ ++ Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQP 191 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 ++G D +VL CTHYP + L +D+ ++AR+ AR L+ Sbjct: 192 AV--EQG--ADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILI 240 >gi|302391765|ref|YP_003827585.1| glutamate racemase [Acetohalobium arabaticum DSM 5501] gi|302203842|gb|ADL12520.1| glutamate racemase [Acetohalobium arabaticum DSM 5501] Length = 250 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL++ ++P +IY AD PYG +K + I D+ Sbjct: 3 IGFFDSGVGGITVLKEALKVLPNKDYIYYADTANVPYGTKPKEEVKHYVFDAVDFITDQG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA ++ ++LR F +G PA+K A ++ + + +TP TL+ Sbjct: 63 INAL-VIACNTATSVAVNDLRDEF-QFPIIGMEPAVKPAVEKNKTKKVLVTATPLTLQEE 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ S+ ++ S+ L V E+A E+ I +E F + R I Sbjct: 121 KLWELVAKIGSK---DIIDSLPLPKLV-EFAENFIFDEETILSYLEERFSSYDLNRYSSI 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLD-NSDSIARRARCL 233 VL CTH+ +FR++ P V+ +D N ++ + R L Sbjct: 177 VLGCTHFIFYRRLFRKIIPDDVEIIDGNRGAVKQLKRQL 215 >gi|260556259|ref|ZP_05828478.1| glutamate racemase [Acinetobacter baumannii ATCC 19606] gi|260410314|gb|EEX03613.1| glutamate racemase [Acinetobacter baumannii ATCC 19606] Length = 288 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 10/233 (4%) Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K L ++ I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LT 71 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124 D L + ++V+ACNTA D LR + +G VPA+K A T+S +++ Sbjct: 72 ARAVDWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+TPAT R +++ + + + ++S+ L VE + + +++ ++ Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQP 191 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 ++G D +VL CTHYP + L +D+ ++AR+ AR L+ Sbjct: 192 AV--EQG--ADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILI 240 >gi|94311212|ref|YP_584422.1| glutamate racemase [Cupriavidus metallidurans CH34] gi|93355064|gb|ABF09153.1| glutamate racemase [Cupriavidus metallidurans CH34] Length = 270 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 6/212 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL+++R L+P +Y AD PYG + ++ R + + ++ + Sbjct: 8 IFDSGLGGLSVLREVRALLPHESLLYFADSRYAPYGEKPERFVEARTLQVCEWLVAQGCK 67 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACNTA LR ++ +G P +K AAA ++S ++ +L+T TL+ Sbjct: 68 AL-VIACNTATMHAVQTLRERL-AVPIIGVEPGLKPAAAASRSKVVGVLATANTLKSAKF 125 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + L+ S ++ + + L +E+ + D +++ + D +VL Sbjct: 126 NRLLTSLGNESRFLCEAGVGLVPLIEQG----DVSSDTVRQTLGTLLSPMLEAGADTLVL 181 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 CTHYP + L + +D +IAR+ Sbjct: 182 GCTHYPFLSETIDDLVDGRLALIDTGVAIARQ 213 >gi|71066509|ref|YP_265236.1| glutamate racemase [Psychrobacter arcticus 273-4] gi|71039494|gb|AAZ19802.1| glutamate racemase [Psychrobacter arcticus 273-4] Length = 330 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 10/238 (4%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 +ID + I +FDSGIGGL V + +P +IY AD + PYGN + +K Sbjct: 37 EIDTKGIKADRSAPIGLFDSGIGGLSVYLHLAHQLPNERYIYYADTLHVPYGNRDSEDIK 96 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 L L + L VIACN+A + R +P + +G VPA+K A ++SG Sbjct: 97 A-LTLTAVKWLHQQGCKLIVIACNSASAYALETARHHYPQLPIVGLVPALKPAVLASKSG 155 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKE 179 +++L+T ATL T +++I S + L VE ++++ Sbjct: 156 HVAVLATKATLNGTLLNDVITKIASPSATRVTKYFDPQLVPWVESGMPENSKTAQNLRQQ 215 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ---LSPWPVDWLDNSDSIARRARCLL 234 ++ K+G D +VL CTHYP Q + +D+ +IA R + LL Sbjct: 216 LQ--VFAKDG--IDQLVLGCTHYPFFKDFLMQEIEEQKLSMQVVDSGQAIAERVKQLL 269 >gi|184156710|ref|YP_001845049.1| glutamate racemase [Acinetobacter baumannii ACICU] gi|332873119|ref|ZP_08441076.1| glutamate racemase [Acinetobacter baumannii 6014059] gi|183208304|gb|ACC55702.1| Glutamate racemase [Acinetobacter baumannii ACICU] gi|322506599|gb|ADX02053.1| murI [Acinetobacter baumannii 1656-2] gi|323516476|gb|ADX90857.1| glutamate racemase [Acinetobacter baumannii TCDC-AB0715] gi|332738631|gb|EGJ69501.1| glutamate racemase [Acinetobacter baumannii 6014059] Length = 288 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 20/238 (8%) Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K L ++ I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LT 71 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124 D L + ++V+ACNTA D LR + +G VPA+K A T+S +++ Sbjct: 72 ARAVDWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVE-----EYACGIKIKEDEIK 177 +L+TPAT R +++ + + + ++S+ L VE AC ++E ++ Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPACLNALRE-VLQ 190 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 +E + D +VL CTHYP + L +D+ ++AR+ AR L+ Sbjct: 191 PAVE--------QGADYLVLGCTHYPFLNEAIHYLFDNQFTLVDSGLAVARQTARILI 240 >gi|218280883|ref|ZP_03487507.1| hypothetical protein EUBIFOR_00065 [Eubacterium biforme DSM 3989] gi|218217817|gb|EEC91355.1| hypothetical protein EUBIFOR_00065 [Eubacterium biforme DSM 3989] Length = 258 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 7/203 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +N I +FDSG+GG+ VL M L+P + IY+ D PYG + KR + + + + Sbjct: 4 KNPIGVFDSGLGGISVLHTMHSLLPNENLIYLGDSKYNPYGTKTKEEITKRCIAICDEFI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNTA + LR + + +G PA+K A + I++ +T TL Sbjct: 64 KQDVKAI-VIACNTATSACVKLLREKY-DVDIIGMEPALKVACDRGNNQRIAVWATELTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKIKEDEIKKEIEGCFIEKEGKR 191 +NL+ + + HI V L VE+ + E +K+ + C + K Sbjct: 122 SEKKFANLMDRFKDEHHIVKVPCPKLVRMVEDDKLDDTNLVESVLKEYLAAC----DYKN 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 D IVL CTH+P +L P Sbjct: 178 LDSIVLGCTHFPFYTKYLERLCP 200 >gi|183602360|ref|ZP_02963726.1| glutamate racemase [Bifidobacterium animalis subsp. lactis HN019] gi|219683325|ref|YP_002469708.1| glutamate racemase [Bifidobacterium animalis subsp. lactis AD011] gi|241191286|ref|YP_002968680.1| glutamate racemase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196692|ref|YP_002970247.1| glutamate racemase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254766107|sp|B8DT03|MURI_BIFA0 RecName: Full=Glutamate racemase gi|183218279|gb|EDT88924.1| glutamate racemase [Bifidobacterium animalis subsp. lactis HN019] gi|219620975|gb|ACL29132.1| glutamate racemase [Bifidobacterium animalis subsp. lactis AD011] gi|240249678|gb|ACS46618.1| glutamate racemase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251246|gb|ACS48185.1| glutamate racemase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177402|gb|ADC84648.1| Glutamate racemase [Bifidobacterium animalis subsp. lactis BB-12] gi|295794279|gb|ADG33814.1| glutamate racemase [Bifidobacterium animalis subsp. lactis V9] Length = 258 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 7/250 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GG+ V++++R +P +Y D PYG ++ + D +++ Sbjct: 9 VFDSGLGGISVVRQIRTDLPHERILYFGDSANAPYGTKTPEQVRDLSFRIVEDFVEQGAK 68 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLRRT 135 + VIACNTA + ELR + + +G PA+K A + + + + +TP TLR Sbjct: 69 AV-VIACNTATSSAVQELREHY-DIPIIGMEPALKVACDRGHGERQSVIVAATPLTLRER 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+H + IH L VE G D + + + F + + TD + Sbjct: 127 KFAALMHRFEDAHTIHKQPCPRLVEIVER---GELDDHDLVMRTLHDYFDQYDLAHTDSV 183 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ FR+L P V +D ++ AR +L + D + + Sbjct: 184 VLGCTHFVFYRDYFRELLPNNVAIVDGNEGTARHLEVVLESLGKLAPEEQDGGVILRNSD 243 Query: 256 PDIAMRRLMQ 265 P + L Q Sbjct: 244 PGERIAELAQ 253 >gi|169797366|ref|YP_001715159.1| glutamate racemase [Acinetobacter baumannii AYE] gi|213155819|ref|YP_002317864.1| glutamate racemase [Acinetobacter baumannii AB0057] gi|215484806|ref|YP_002327041.1| glutamate racemase [Acinetobacter baumannii AB307-0294] gi|301345461|ref|ZP_07226202.1| glutamate racemase [Acinetobacter baumannii AB056] gi|301511091|ref|ZP_07236328.1| glutamate racemase [Acinetobacter baumannii AB058] gi|332851876|ref|ZP_08433779.1| glutamate racemase [Acinetobacter baumannii 6013150] gi|332867934|ref|ZP_08437922.1| glutamate racemase [Acinetobacter baumannii 6013113] gi|169150293|emb|CAM88190.1| glutamate racemase [Acinetobacter baumannii AYE] gi|213054979|gb|ACJ39881.1| glutamate racemase [Acinetobacter baumannii AB0057] gi|213987180|gb|ACJ57479.1| glutamate racemase [Acinetobacter baumannii AB307-0294] gi|332729661|gb|EGJ60997.1| glutamate racemase [Acinetobacter baumannii 6013150] gi|332733635|gb|EGJ64794.1| glutamate racemase [Acinetobacter baumannii 6013113] Length = 288 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 10/233 (4%) Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K L ++ I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LT 71 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124 D L + ++V+ACNTA D LR + +G VPA+K A T+S +++ Sbjct: 72 ARAVDWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+TPAT R +++ + + + ++S+ L VE + + +++ ++ Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQP 191 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 ++G D +VL CTHYP + L +D+ ++AR+ AR L+ Sbjct: 192 AV--EQG--ADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILI 240 >gi|224025256|ref|ZP_03643622.1| hypothetical protein BACCOPRO_01993 [Bacteroides coprophilus DSM 18228] gi|224018492|gb|EEF76490.1| hypothetical protein BACCOPRO_01993 [Bacteroides coprophilus DSM 18228] Length = 280 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 10/243 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG GGL +L K+R LMP +IY+ D+ PYG + + + + + P Sbjct: 14 VFDSGYGGLTILAKIRELMPHNDYIYLGDNARTPYGTRSFEVVYEFTLQAVRKLFELGCP 73 Query: 78 VLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 L ++ACNTA ++ +++L P+ LG + P ++ A T + + +L+TP T Sbjct: 74 -LVILACNTASAKALRSIQQNDLPYLDPTRRVLGVIRPTVESIGALTATRHVGVLATPGT 132 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + IH + + + VE + + ++K I+G + Sbjct: 133 ILSESYPLEIHKLFPDVQVTGMPCPMWVPLVENNEFASEGADYFVRKYIDGLL--SQDPE 190 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250 D ++L CTHYPL++ R+ +P + + + +AR + L R +R + H Sbjct: 191 IDTLILGCTHYPLLLDKIRRFTPSHIRLVAQGEYVARSLKDYLSRHTEMNSRCTCNGHCE 250 Query: 251 FLS 253 FL+ Sbjct: 251 FLT 253 >gi|94987309|ref|YP_595242.1| glutamate racemase [Lawsonia intracellularis PHE/MN1-00] gi|94731558|emb|CAJ54921.1| Glutamate racemase [Lawsonia intracellularis PHE/MN1-00] Length = 286 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 13/248 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VLQ ++ LMP +++Y+ D PYG + + S ++++ Sbjct: 7 IGLFDSGVGGLTVLQALQNLMPNENYLYLGDTARLPYGTKSPKTVLHYAIQSASTLIER- 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 Q L +IACNTA L+ TFP + +G + P+ + A + G +++++T +T++ Sbjct: 66 QIKLLIIACNTATAAALPLLQETFPFIPIIGVIEPSAQIACKTSLKGHVAVIATESTIQG 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-RTD 193 I Y + + + + VEE I E I + F + K + D Sbjct: 126 KCYEETILRYRPEILVESKACPLFVPIVEEGWFSGPIVESIIIHYLSSLFFNRSIKDQPD 185 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR-CLL------PRINTHQTRVF- 245 +VL CTHYPL+ +++ + +D++ + A+ + C++ P N + +F Sbjct: 186 CLVLGCTHYPLLSETIQKIIGNDITIVDSTVATAKLVQACIIQHNMVNPNTNLIGSTIFL 245 Query: 246 --DDHALF 251 DD F Sbjct: 246 TTDDKVRF 253 >gi|212213193|ref|YP_002304129.1| glutamate racemase [Coxiella burnetii CbuG_Q212] gi|212011603|gb|ACJ18984.1| glutamate racemase [Coxiella burnetii CbuG_Q212] Length = 280 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 10/227 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++ +P +IY+ D PYG + R + IL Sbjct: 7 IGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETV-SRYATQMASILITQ 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T++ Sbjct: 66 NIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTIQS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EG-KR 191 N + + Q I + + + EE C DEI + ++E G + Sbjct: 126 GIYQNTLRALSPQIEITTQTCGLFVALAEE-GC----TNDEIALLVAKKYLEPIINGYHQ 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D ++L CTH+P+++ + ++ ++++ + A + +L + N Sbjct: 181 CDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNN 227 >gi|262067163|ref|ZP_06026775.1| glutamate racemase [Fusobacterium periodonticum ATCC 33693] gi|291379121|gb|EFE86639.1| glutamate racemase [Fusobacterium periodonticum ATCC 33693] Length = 264 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 7/191 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D K Sbjct: 8 IGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILDFFVKN 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST T Sbjct: 68 NCKLVIVACNTASTAAIDYLREKFP-LPILGIVEAGIKIARKNTKTKNIAVISTKFTAES 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 N ++ ++ ++ + +E +E+ + K ++ + K D Sbjct: 127 HGYKNKAKMIDTELNVKEIACVEFPMMIETGWETFDNREELLNK-----YLSEIPKNVDT 181 Query: 195 IVLACTHYPLI 205 +VL CTHYPLI Sbjct: 182 LVLGCTHYPLI 192 >gi|160915680|ref|ZP_02077888.1| hypothetical protein EUBDOL_01688 [Eubacterium dolichum DSM 3991] gi|158432156|gb|EDP10445.1| hypothetical protein EUBDOL_01688 [Eubacterium dolichum DSM 3991] Length = 258 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 6/224 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG+GG+ VL+++ LMP+ + +Y D PYG + +R + Sbjct: 3 VNSPIGIFDSGMGGISVLKQIHALMPQENLLYFGDSAYAPYGEKSRAEITERCYSICEFF 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + K + VIACNTA + +ELR + ++ +G PA+K AA Q I +L+T T Sbjct: 63 MRKKVKAI-VIACNTATSACVNELRKRYLNIPIIGMEPALKVAADNEQQQHILVLATYFT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE-IKKEIEGCFIEKEGK 190 L+ ++L+ + I+ L VEE+ K++++E +K+ + + Sbjct: 122 LKEKKFADLMARCEKEHIIYKQPCPALVHIVEEH----KLQDEELVKQTLRNYLAPYNLE 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + IVL CTH+ +L P + +D + A++ + LL Sbjct: 178 EINSIVLGCTHFVFYRKYLTELLPKHIAIIDGNTGTAKQVKHLL 221 >gi|154503523|ref|ZP_02040583.1| hypothetical protein RUMGNA_01347 [Ruminococcus gnavus ATCC 29149] gi|153795623|gb|EDN78043.1| hypothetical protein RUMGNA_01347 [Ruminococcus gnavus ATCC 29149] Length = 276 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 CEKK + I +FDSG+GGL V++++ +P + +Y D PYG+ K + Sbjct: 5 CEKK-KAPIGVFDSGVGGLTVVREITRQLPHENIVYFGDTARVPYGSK-----SKSNIIR 58 Query: 68 FSD----ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122 FS+ L Q VIACNTA L D +R F + +G VP + A T +G Sbjct: 59 FSEQIIRFLKTKQVKAIVIACNTASALALDAVRDEF-DIPIIGVIVPGARAAVEATANGE 117 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I ++ T AT++ + +IH H+ + + VEE KE + +E+ Sbjct: 118 IGVVGTDATVKSGTYTKVIHQMDPNIHVREKACPLFVPLVEE-----GFKEHVVTEEVIE 172 Query: 183 CFIEK-EGKRTDVIVLACTHYPLI 205 ++E + D ++L CTHYPL+ Sbjct: 173 YYLESLKHTEIDAMILGCTHYPLL 196 >gi|308068806|ref|YP_003870411.1| glutamate racemase [Paenibacillus polymyxa E681] gi|305858085|gb|ADM69873.1| Glutamate racemase [Paenibacillus polymyxa E681] Length = 267 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 18/230 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL + +P +F+Y+AD + PYG + + IL + Sbjct: 3 IGFFDSGLGGITVLSEALRRLPNENFVYMADTLHVPYGTKTPQEVLGYVKASVETILKED 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133 L VIACNTA ++ ELR +P + +G PA+K A ++ + +L+TP TL+ Sbjct: 63 VKAL-VIACNTATSIAVAELRKEYP-IPIIGMEPAVKPAVEMNRANGKRVLVLATPLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEI----KKEIEGCFIEKE 188 ++ + L VS+ H V S+ L V +Y + E+ +E+ ++ Sbjct: 121 QSCYAAL----VSRVDDHGSVDSLPLPELV-QYCEQLNFDRAEMSEYFNRELSSFNLDIY 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 G +VL CTHYP + R+L P + +D S RR + +L N Sbjct: 176 G----TVVLGCTHYPFYKEILRELLPSHIQLIDGSQGTVRRLKQVLSERN 221 >gi|154707217|ref|YP_001425115.1| glutamate racemase [Coxiella burnetii Dugway 5J108-111] gi|154356503|gb|ABS77965.1| glutamate racemase [Coxiella burnetii Dugway 5J108-111] Length = 280 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 10/227 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++ +P +IY+ D PYG + R + IL Sbjct: 7 IGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETV-SRYATQMASILIAQ 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T++ Sbjct: 66 NIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTIQS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EG-KR 191 N + + Q I + + + EE C DEI + ++E G + Sbjct: 126 GIYQNTLRALSPQIEITTQTCGLFVALAEE-GC----TNDEIALLVAKKYLEPIINGYHQ 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D ++L CTH+P+++ + ++ ++++ + A + +L + N Sbjct: 181 CDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNN 227 >gi|237740114|ref|ZP_04570595.1| glutamate racemase [Fusobacterium sp. 2_1_31] gi|229422131|gb|EEO37178.1| glutamate racemase [Fusobacterium sp. 2_1_31] Length = 264 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 7/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D Sbjct: 5 RQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILDFF 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 K L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST T Sbjct: 65 VKNNCKLVIVACNTASTAAIDYLREKFP-LPILGIVEAGIKIARKNTKTKNIAVISTKFT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 N ++ ++ ++ + +E +E+ + K ++ + K Sbjct: 124 AESHGYKNKAKMIDTELNVKEIACVEFPMMIETGWDTFDNREELLNK-----YLAEIPKN 178 Query: 192 TDVIVLACTHYPLI 205 D +VL CTHYPLI Sbjct: 179 VDTLVLGCTHYPLI 192 >gi|261856843|ref|YP_003264126.1| glutamate racemase [Halothiobacillus neapolitanus c2] gi|261837312|gb|ACX97079.1| glutamate racemase [Halothiobacillus neapolitanus c2] Length = 288 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 12/217 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V Q +R +P IY+AD PYG+ + +R + + + L Sbjct: 17 IGIFDSGVGGLSVYQAVRHALPAEDIIYIADSGHAPYGDRSSDFITERAVAM-TGFLVAA 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + +LR F S+ + PAIK A +++SG I +L+T T+ Sbjct: 76 GAKAVVVACNTATVIAVAQLRRQF-SIPIIALEPAIKPAIEHSRSGTIGVLATRKTIESP 134 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK--EIEGCFIEK-EGKRT 192 L C IH ++ +L + ++ E E K E+ ++E Sbjct: 135 AVERL-------CRIHGANTRVLLQPCPGFVEQVERGEMEHPKTYELIRRYVEPLLASGA 187 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D +VL CTHY + R + V LD+S ++AR+ Sbjct: 188 DTLVLGCTHYVYLAQQIRAIVGPDVTILDSSAAVARQ 224 >gi|258405574|ref|YP_003198316.1| glutamate racemase [Desulfohalobium retbaense DSM 5692] gi|257797801|gb|ACV68738.1| glutamate racemase [Desulfohalobium retbaense DSM 5692] Length = 279 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 9/247 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I +FDSG+GGL VL+++ ++P YVAD PYG + +++R + L + Sbjct: 11 MEGGIGVFDSGVGGLSVLKEIDRVLPHEDLWYVADSAEAPYGEKSEEEIRQRSLELARFL 70 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + L VIACNTA +ELR+ P PA+K A A + SG I +L+T T Sbjct: 71 VQRGAKAL-VIACNTATAAAAEELRAQCPVPVVA-VEPAVKPAVALSCSGCIGVLATTGT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L+ L+ Y + + + L RVE + + + + + G +++ +R Sbjct: 129 LQSKRFQALLKRYAGSAEVAVQACPGLVERVE-----MGDLDGPVTRVLLGSYVQALAER 183 Query: 192 -TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTHYP + + R + LD ++AR L R+ + Sbjct: 184 GADTLVLGCTHYPFLRPLVRDCIGETMPVLDTGLAVARHLHSELRRLELERPAARQGQRR 243 Query: 251 F-LSGKP 256 F +G+P Sbjct: 244 FWTTGEP 250 >gi|164687228|ref|ZP_02211256.1| hypothetical protein CLOBAR_00869 [Clostridium bartlettii DSM 16795] gi|164603652|gb|EDQ97117.1| hypothetical protein CLOBAR_00869 [Clostridium bartlettii DSM 16795] Length = 258 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 4/224 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I +FDSG+GG+ VL+ ++ LMP FIY D PYG + KR + + + Sbjct: 5 KKAIGVFDSGLGGISVLRDLKKLMPNEDFIYFGDSAYAPYGIKTKDEITKRCVEIIDFFI 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K + VIACNTA + + LR + + +G PA+K A ++ I +++TP TL Sbjct: 65 EKGVKAV-VIACNTATSASANYLRKKYKDLPIIGMEPALKVATQGVKNNNIVVMATPLTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+H + + V M VE + E + +++ + Sbjct: 124 KEKKFETLMHKFRGN---NKVVKMPCPKLVEIVENDLLDDETTVVNQLKDYYKNVNVDNL 180 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 D +VL CTH+ + P +D + + + +L + Sbjct: 181 DSVVLGCTHFIFYKDYLNEFLPETAHLVDGNMGTCKHVKEILEQ 224 >gi|297618209|ref|YP_003703368.1| glutamate racemase [Syntrophothermus lipocalidus DSM 12680] gi|297146046|gb|ADI02803.1| glutamate racemase [Syntrophothermus lipocalidus DSM 12680] Length = 273 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 121/259 (46%), Gaps = 19/259 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V++++ +P + IY+ D PYG L RL D L Sbjct: 9 VFDSGVGGLTVVKEIIKRLPCENIIYIGDTANVPYGGKPPQEL-IRLGKNIIDFLINQGA 67 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V ACNT+ ++ LR P VP AAA T++G + +++T AT++ Sbjct: 68 KAVVAACNTSSSVSIPILRDMCPVPVIDVIVPGAANAAAVTRNGRVGVIATEATVKTGAY 127 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DVIV 196 + I + ++ V+ VE+ ++ DE+ +E+ +++ ++ D +V Sbjct: 128 TRHIKALSPGISVYEVACPRFVPLVEQGV----LEGDEV-EEVANEYLQPLRRQGIDTLV 182 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-------PRINTHQTRVF---D 246 + CTHYP ++ V +++ V +D ++ A R R L P + Q R F Sbjct: 183 IGCTHYPFLIPVIQKVMGKGVRLVDPAEETASRLRATLLERGLDNPGTTSPQYRFFATGS 242 Query: 247 DHALFLSGK--PDIAMRRL 263 + F GK P+I +R++ Sbjct: 243 SESFFRVGKLLPEIDIRKV 261 >gi|86140719|ref|ZP_01059278.1| glutamate racemase [Leeuwenhoekiella blandensis MED217] gi|85832661|gb|EAQ51110.1| glutamate racemase [Leeuwenhoekiella blandensis MED217] Length = 263 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 11/259 (4%) Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 +QN I +FDSG+GG + +++ +P IY+AD PYG + + Sbjct: 1 MQNKRPIGVFDSGVGGTSIWKEIVAKLPYEDSIYLADIKNAPYGERSKEEIIALSVKNTE 60 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++D+ ++ V+ACNTA T D LR+ + + F+G PAIK AA +++ I IL+T Sbjct: 61 YLIDQGCKII-VVACNTATTNAIDVLRANY-DIPFIGIEPAIKPAALASKTKAIGILATK 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TL + Y S+ ++ V L +E + + +K IE Sbjct: 119 GTLSSALFARTSSLYTSELNVVEVIGKGLVELIEAGKLHTEKLFNLLKSYIEPML----A 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDH 248 + D +VL C+HYP ++ V +++ P + +D+ ++A++ R L Q F H Sbjct: 175 QNIDYLVLGCSHYPYLIPVLKKILPEHIQIIDSGQAVAKQTERVLGANQLLSQVDQFGKH 234 Query: 249 ALFLSGKPDI--AMRRLMQ 265 L+ + +I A+ + +Q Sbjct: 235 KLYSNASIEILEALTKELQ 253 >gi|262280802|ref|ZP_06058585.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202] gi|262257702|gb|EEY76437.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202] Length = 288 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 9/223 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L D L + Sbjct: 23 IGIFDSGIGGMSVAAEIARYLPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQ 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT R Sbjct: 82 GCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRG 141 Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +++ + + + ++++ L VE ++ + +K+ ++ + Sbjct: 142 QLIKDVVEKFAIPAGVKVMTLTNLELVPCVEAGQQMGEVCLNALKEVLQ----PAAEQGA 197 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234 D +VL CTHYP + L +D+ ++AR+ AR L+ Sbjct: 198 DYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILI 240 >gi|19704496|ref|NP_604058.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328142|ref|ZP_06870673.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|22001821|sp|Q8REE6|MURI_FUSNN RecName: Full=Glutamate racemase gi|19714772|gb|AAL95357.1| Glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154654|gb|EFG95440.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 264 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 7/191 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG VL+++ +P +IY D+ FPYG+ + ++L D K Sbjct: 8 IGIFDSGLGGTTVLKELINSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFVKN 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 L ++ACNTA T D LR F S+ +G + A +K A+ T++ I+++ST T Sbjct: 68 NCKLVIVACNTASTAAIDYLREKF-SLPIIGIIEAGVKIASKNTKNKNIAVISTKFTAES 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 N S+ ++ ++ + A +E G ++ +KE+ ++ + K D Sbjct: 127 HGYKNKAKMLDSELNVKEIACIEFAQMIE---TGWDTFDN--RKELLNKYLSEIPKNADT 181 Query: 195 IVLACTHYPLI 205 +VL CTHYPLI Sbjct: 182 LVLGCTHYPLI 192 >gi|153208641|ref|ZP_01946893.1| glutamate racemase [Coxiella burnetii 'MSU Goat Q177'] gi|165919769|ref|ZP_02219512.1| glutamate racemase [Coxiella burnetii RSA 334] gi|212218133|ref|YP_002304920.1| glutamate racemase [Coxiella burnetii CbuK_Q154] gi|120575827|gb|EAX32451.1| glutamate racemase [Coxiella burnetii 'MSU Goat Q177'] gi|165916852|gb|EDR35456.1| glutamate racemase [Coxiella burnetii RSA 334] gi|212012395|gb|ACJ19775.1| glutamate racemase [Coxiella burnetii CbuK_Q154] Length = 280 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 10/227 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++ +P +IY+ D PYG + R + IL Sbjct: 7 IGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETV-SRYATQMASILIAQ 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T++ Sbjct: 66 NIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTIQS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE---KEGKR 191 N + + Q I + + + EE C DEI + ++E + Sbjct: 126 GIYQNTLRALSPQIEITTQTCGLFVALAEE-GC----TNDEIALLVAKKYLEPIINVYHQ 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D ++L CTH+P+++ + ++ ++++ + A + +L + N Sbjct: 181 CDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNN 227 >gi|167756830|ref|ZP_02428957.1| hypothetical protein CLORAM_02379 [Clostridium ramosum DSM 1402] gi|237734546|ref|ZP_04565027.1| glutamate racemase [Mollicutes bacterium D7] gi|167703005|gb|EDS17584.1| hypothetical protein CLORAM_02379 [Clostridium ramosum DSM 1402] gi|229382366|gb|EEO32457.1| glutamate racemase [Coprobacillus sp. D7] Length = 264 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 88/199 (44%), Gaps = 23/199 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I DSG+GGL VL++ +MP FIY D + PYG ++ L F D L K Sbjct: 11 IGFIDSGLGGLSVLKEAIKIMPHEDFIYYGDSLNAPYGTKSVDEIRD-LTFAIVDKLLKL 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +ACNTA + +LR +P + +G PAIK A G I +++TP T+++ Sbjct: 70 GIKGLAVACNTATSAAVRQLRIMYPDLTIVGIEPAIKPAVESNHGGEILVMATPMTIKQE 129 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE------- 188 + L+ Y + I VS L VE + G F+E Sbjct: 130 KFNRLLDIYKDRAKIIPVSCKGLMEFVEH-------------GNLNGSFLEAYFNETLVP 176 Query: 189 --GKRTDVIVLACTHYPLI 205 T+ IVL CTHYP + Sbjct: 177 YLNDTTETIVLGCTHYPFL 195 >gi|300691131|ref|YP_003752126.1| glutamate racemase [Ralstonia solanacearum PSI07] gi|299078191|emb|CBJ50834.1| Glutamate racemase [Ralstonia solanacearum PSI07] Length = 277 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 6/218 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + + Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPQFIAERTLRVCGW 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + L VIACNTA LR+ ++ +G P +K AAA ++S ++ +L+T + Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLRAQL-AVPVIGVEPGLKPAAATSRSRVVGVLATES 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+ + C + L +E + + ++ Sbjct: 122 TLRSDKFARLLGNVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLQAYLQPMLEA 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYP + R+++ + +D ++AR Sbjct: 178 GADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVAR 215 >gi|254247709|ref|ZP_04941030.1| Glutamate racemase [Burkholderia cenocepacia PC184] gi|124872485|gb|EAY64201.1| Glutamate racemase [Burkholderia cenocepacia PC184] Length = 285 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 7/234 (2%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + Sbjct: 1 MTNPSHATAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + L + VIACNTA +R S+ +G P IK AAA +++ Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRECL-SIPLVGVEPGIKPAAALSET 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G+ +L+T +TL L+ Y + L +E +++ I Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTNSPALRALLERYI 178 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 + + D +VL CTHYP R L + +D SD+IAR+ AR L Sbjct: 179 QPMLDDG----ADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVL 228 >gi|189425888|ref|YP_001953065.1| glutamate racemase [Geobacter lovleyi SZ] gi|189422147|gb|ACD96545.1| glutamate racemase [Geobacter lovleyi SZ] Length = 275 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 9/223 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ +P+ IY D PYG + + + S L Sbjct: 4 QAIGIFDSGVGGLTVLRELTKALPQEDTIYFGDTARVPYGTKSPDTVIRYSQEIAS-FLI 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 K L V+ACNTA + LR + P + +G + P K+AA T+SG++ ++ T T+ Sbjct: 63 KRDIKLLVVACNTASAVALPTLRRSLP-VPVVGVIEPGAKRAAEVTRSGVVGVIGTSGTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191 R + S I + + EE ++++ + ++E+ + Sbjct: 122 RSSAYSRAIKRLNPDISVLAKPCPLFVPLAEEGWI-----DNDVTRITARLYLEELREAQ 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYPL+ V ++ V +D+++ AR +L Sbjct: 177 VDTLVLGCTHYPLLKKVIAEVMGPDVTLVDSAEETARTVATIL 219 >gi|313898081|ref|ZP_07831620.1| glutamate racemase [Clostridium sp. HGF2] gi|312957109|gb|EFR38738.1| glutamate racemase [Clostridium sp. HGF2] Length = 259 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 22/248 (8%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I +FDSG+GG+ VL+++R LMP+ ++Y D PYG + KR + + Sbjct: 4 IDKAIGVFDSGLGGISVLKELRSLMPQEDYLYYGDSSFAPYGVKTKEEITKRCRSICAFF 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + + VIACNTA + ELR+ +P + +G PA+K A + +L+T T Sbjct: 64 ISQGVKAV-VIACNTATSACVKELRTLYPDLPIVGMEPALKPAVDGRHQQHVLVLATQFT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHL-----VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 L+ L+ + I+ + ++ A R+E+ A + + Sbjct: 123 LKEKKFEQLMSRFDEDNTIYRQPCPKLVELVEAGRLEDEAA--------VNSALREYLKP 174 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR--------RARCLLPRIN 238 + +R D IVL CTH+ R L + +D + AR R C P Sbjct: 175 YDMERMDSIVLGCTHFVFYRSQLRNLIGDHIALVDGNAGTARHVQELLQERGVCRKPSSA 234 Query: 239 THQTRVFD 246 + R+++ Sbjct: 235 AGEVRIYN 242 >gi|71280369|ref|YP_268000.1| glutamate racemase [Colwellia psychrerythraea 34H] gi|71146109|gb|AAZ26582.1| glutamate racemase [Colwellia psychrerythraea 34H] Length = 256 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 10/190 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL + + + +P + IY+AD + PYG + KR+ ++ ++DK Sbjct: 1 MFDSGVGGLSIAKCITEQLPHENIIYIADSLHAPYGEKSVEFIIKRVNYIAKQLIDKGVK 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNTA ++LRS S+ +G PAIK AA + S ++IL+T AT Sbjct: 61 AI-VIACNTATVNAIEQLRSQV-SIPIIGVEPAIKPAAKQSISKKVAILATQATSENQRF 118 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEGKRTDVI 195 +LI + + +H+ L +E+ G + +D + K+ I KEG D + Sbjct: 119 KDLIDLHHNGAEVHIQPCPGLVEFIEQ---GNQNSDDCNALLKQYINPLI-KEG--IDTL 172 Query: 196 VLACTHYPLI 205 VL CTHYP + Sbjct: 173 VLGCTHYPFV 182 >gi|94268729|ref|ZP_01291267.1| Glutamate racemase [delta proteobacterium MLMS-1] gi|93451485|gb|EAT02316.1| Glutamate racemase [delta proteobacterium MLMS-1] Length = 264 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 13/216 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS----DI 71 I IFDSG+GG+ V + + +P++ IY D PYG+ + +S D Sbjct: 2 IGIFDSGVGGMTVARAIEQALPDHRLIYFGDLARTPYGSKSAETITA-----YSRQNVDF 56 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + L V+ACN+A ++ LR+++ F PA+++A Y+ G + ++ T AT Sbjct: 57 LRQQGAKLLVVACNSAASVATAALRASYELPLFEVISPAVREAVHYSSGGRVGVIGTRAT 116 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R L+ C + + +L VEE + + E K + + + Sbjct: 117 IRSGVYEELLQRQRPACRVFAAACPLLVPLVEEG----WLDKRETKMILRRYLAPLKRHQ 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTHYPL+ + ++ V +D+S ++A Sbjct: 173 VDTLVLGCTHYPLLKEMIQRRIGRRVRVIDSSAALA 208 >gi|238927873|ref|ZP_04659633.1| glutamate racemase [Selenomonas flueggei ATCC 43531] gi|238884206|gb|EEQ47844.1| glutamate racemase [Selenomonas flueggei ATCC 43531] Length = 262 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 13/245 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL R ++P FI+ AD PYG A++ + F ++++ Sbjct: 3 IALFDSGYGGLTVLSHARRVLPSEEFIFYADRDHVPYGTKSVPAVRGFVRTAFRFLIEQQ 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA ++ DE+R + + +G PA+K+A + + +TP T+ Sbjct: 63 RADAVVVACNTATSVAVDEMRRLY-DVPIIGMEPAVKKALTRDADHRVLVTATPITVHGE 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI S C + + ++ ++ E+A + ++ + F I Sbjct: 122 KLKRLI----SSCDPNGLVDLLALPQLVEFAERQEFVSSAVEAYLRDAFAPYRFADYSAI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDS----IARRARCLLPRINTHQTRVFDDHALF 251 VL CTH+ RQL P V +D ++ +ARR I F Sbjct: 178 VLGCTHFNYFKDTMRQLLPQNVRLVDGNEGTVEELARRTGLRTQPIGAQTAHC----TFF 233 Query: 252 LSGKP 256 SG+P Sbjct: 234 ESGRP 238 >gi|51244544|ref|YP_064428.1| glutamate racemase [Desulfotalea psychrophila LSv54] gi|50875581|emb|CAG35421.1| probable glutamate racemase [Desulfotalea psychrophila LSv54] Length = 295 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 12/216 (5%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I IFDSG+GGL V K++ L+P IY AD PYG ++ R + + Sbjct: 20 KAKKPIGIFDSGVGGLSVALKIKELLPREDLIYFADTGFSPYGTKPAELIRSRAKHITAF 79 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ K + V+ACNTA LR+T ++ +G P I+ A ++SG+I +L+T Sbjct: 80 LIKKGCKAI-VVACNTATANAIAYLRAT-SNIPIIGVEPGIRPAVQQSKSGIIGVLATRQ 137 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE---K 187 TL+ + L + + I + + L VE + +E + IEG ++E + Sbjct: 138 TLKSSSFQTLKKRFAGKSQIEIQACPRLVELVEAG----NLTGNETTEAIEG-YVEPLLR 192 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 G D IVL CTHY + +++ +D S Sbjct: 193 AG--ADYIVLGCTHYLFLAPSIKKIISGRAQLIDTS 226 >gi|89095339|ref|ZP_01168257.1| glutamate racemase [Oceanospirillum sp. MED92] gi|89080414|gb|EAR59668.1| glutamate racemase [Oceanospirillum sp. MED92] Length = 276 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 4/215 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL ++ L+P IY+ D PYG ++ + + ++ + Sbjct: 7 IGVFDSGVGGLTVLNAIKDLLPNEDLIYLGDTARVPYGTKSSASVIRYAEQAAAALICRE 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL-R 133 +L VIACNTA + D L+ P +A +G + P + A TQ+ I +++T T+ Sbjct: 67 VKLL-VIACNTASAVAVDHLQKLNPEIAVVGVIEPGADASCAATQNNHIGVIATEGTVNN 125 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + Y S ++ + + S+ +A E + G ++ E +K+ + D Sbjct: 126 QAYQSAILKRNPNASVVAQACSLFVALAEEGWHEG-ELVESIVKECLRPLLESDYQTNMD 184 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTH+P++ R + V+ +D++++ A+ Sbjct: 185 TLVLGCTHFPVLKESIRNIVGDNVELVDSAETTAK 219 >gi|253573395|ref|ZP_04850738.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846923|gb|EES74928.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14] Length = 260 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 11/239 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGGL VL + +P F+Y AD + PYG +K+ + S I+ Sbjct: 3 IAFFDSGIGGLTVLTEAMRKLPNEDFLYFADTLHVPYGTKTLPEVKRYVEESVSLIMQGD 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133 L V+ACNTA + +ELR T+ + +G PA+K A +Q+ + + +T TL Sbjct: 63 IKAL-VVACNTATSAAIEELRRTY-DIPIVGMEPAVKPAVKRSQAAGKRVLVFATSLTLS 120 Query: 134 RTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + ++L V++ H +V SM L V +Y ++ DEI++ + + Sbjct: 121 LSKYTDL----VARVDDHKVVDSMPLPELV-QYCEQLQFDRDEIERYFSRKLAGIDLSQY 175 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 IVL CTH+P + +Q+ P ++ +D S R C L + + + F H F Sbjct: 176 STIVLGCTHFPYYKSILQQILPPHIELIDGSHGTVERL-CSLIGSSANPGQAFKGHIEF 233 >gi|303231315|ref|ZP_07318051.1| glutamate racemase [Veillonella atypica ACS-049-V-Sch6] gi|302514045|gb|EFL56051.1| glutamate racemase [Veillonella atypica ACS-049-V-Sch6] Length = 269 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 13/248 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ ++ P +FIY+ D+ P GN + + + ++ L + Sbjct: 11 IGVFDSGVGGLSVLKVLQEQFPNENFIYIGDNANNPVGNRPTEEITE-IACRIAETLHQV 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNT + DE+RS ++ +G +K A + S I I++T AT+ Sbjct: 70 PVKLMVIACNTFTVVALDEVRSRV-NVPVIGVSQGVKTAIRESNSNTIGIMATVATV--- 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKRT 192 ++ IH YV+ H V + E A I+ + +D ++K + + Sbjct: 126 --NSHIHKYVAMDIDHEV--FVWEQPCPELAGLIEQGHLHDDAVRKAAKEYLAPMLERDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV+VL CTH+P + V ++LS + ++D + + R + + H H+ Sbjct: 182 DVVVLGCTHFPFVSPVLQELSGDRIRYIDPAYETSDLVRRTMDSNHLHNPSTEKGHSTLY 241 Query: 253 SGKPDIAM 260 K DIA+ Sbjct: 242 FTK-DIAL 248 >gi|261415102|ref|YP_003248785.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371558|gb|ACX74303.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327044|gb|ADL26245.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 269 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 29/237 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +LQK+R +P+Y ++Y+ D+ PYG+ + + + ++ + Sbjct: 2 IGVFDSGFGGLTILQKLRHTLPQYDYLYLGDNARAPYGSRSFETIYRYTLQSVRELFHRG 61 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 P L ++ACNTA ++ + L FP LG V P ++ ++++G I I +T Sbjct: 62 CP-LVILACNTASAKALRSIQQQVLPVEFPDRRVLGIVRPTAEEIGNFSKTGHIGIFATA 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI-KKEIEGC--FIE 186 T+ +SN SYV + +S +V ++AC + + E ++ EG F++ Sbjct: 121 GTV----SSN---SYVLE-----ISHFFPNLKVTQHACPMWVPLVEYGERGTEGARFFVK 168 Query: 187 KE-------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 K+ D ++LACTHYPL+ R P V + D +A + L R Sbjct: 169 KDVDQLLAADPEIDTVLLACTHYPLLEDEIRAALPPHVRLVVQGDIVADKTLDYLKR 225 >gi|303229117|ref|ZP_07315918.1| glutamate racemase [Veillonella atypica ACS-134-V-Col7a] gi|302516130|gb|EFL58071.1| glutamate racemase [Veillonella atypica ACS-134-V-Col7a] Length = 269 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 12/209 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ ++ P +FIY+ D+ P GN + + + ++ L + Sbjct: 11 IGVFDSGVGGLSVLKVLQEQFPNENFIYIGDNANNPVGNRPTEEITE-IACRIAETLHQV 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNT + DE+RS ++ +G +K A + S I I++T AT+ Sbjct: 70 PVKLMVIACNTFTVVALDEVRSRV-NVPVIGVSQGVKTAIRESNSNTIGIMATVATV--- 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKRT 192 ++ IH YV+ H V + E A I+ + +D ++K + + Sbjct: 126 --NSHIHKYVAMDIDHEV--FVWEQPCPELAGLIEQGHLHDDAVRKAAKEYLAPMLERDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 DV+VL CTH+P + V ++LS + ++D Sbjct: 182 DVVVLGCTHFPFVSPVLQELSGDRIRYID 210 >gi|304438688|ref|ZP_07398626.1| glutamate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368337|gb|EFM22024.1| glutamate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 262 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 9/218 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL R ++P FI+ AD PYG A++ + F ++++ Sbjct: 3 IALFDSGYGGLTVLSHARRVLPSEEFIFYADRDHVPYGTKSVPAVRGFVRTAFRFLIEQQ 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA ++ DE+R + + +G PA+K+A + + +TP T+ Sbjct: 63 RADAVVVACNTATSVAVDEMRRLY-DVPIIGMEPAVKKALTRDAEHRVLVTATPITVHGE 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI S C + + ++ ++ E+A + ++ + F I Sbjct: 122 KLKRLI----SSCDPNGLVDLLALPQLVEFAERQEFVSSAVEAYLRDAFAPYRFADYSAI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDS----IARR 229 VL CTH+ RQL P V +D ++ +ARR Sbjct: 178 VLGCTHFNYFKDTMRQLLPQNVRLVDGNEGTVEELARR 215 >gi|39998014|ref|NP_953965.1| glutamate racemase [Geobacter sulfurreducens PCA] gi|39984959|gb|AAR36315.1| glutamate racemase [Geobacter sulfurreducens PCA] gi|298506955|gb|ADI85678.1| glutamate racemase [Geobacter sulfurreducens KN400] Length = 272 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 18/250 (7%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ ++P+ IY+ D PYG + R + L Sbjct: 4 KAIGIFDSGVGGLTVLKEIIKVLPQEDTIYLGDTARVPYGTKSPETV-TRYSLEIASFLV 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 K L V+ACNTA + L P + +G + P ++A A T++G + ++ T T+ Sbjct: 63 KRDIKLLVVACNTASAASLEALTERLP-IPVVGVIEPGARRAVATTRTGKVGVIGTEGTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + + I + + + + EE ++ + + G + ++G Sbjct: 122 RSSAYAKAIKRLNPEVEVITRACPLFVPLAEEGWTDNEVARLTARTYLAG--LREQG--V 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR------RARCLLPRINTHQTRVFD 246 D IVL CTHYPL+ V + V +D+++ AR R R LL R + Q Sbjct: 178 DTIVLGCTHYPLLKRVIGETVGEDVRLVDSAEETARTVADILRGRDLL-RPDGEQ----G 232 Query: 247 DHALFLSGKP 256 +H F++ P Sbjct: 233 NHHFFVTDVP 242 >gi|170733557|ref|YP_001765504.1| glutamate racemase [Burkholderia cenocepacia MC0-3] gi|169816799|gb|ACA91382.1| glutamate racemase [Burkholderia cenocepacia MC0-3] Length = 285 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 7/234 (2%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + Sbjct: 1 MTNPSHATAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + L + VIACNTA +R S+ +G P IK AAA + + Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSAT 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G+ +L+T +TL L+ Y + L +E +++ I Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTNSPALRALLERYI 178 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 + + D +VL CTHYP R L + +D SD+IAR+ AR L Sbjct: 179 QPMLDDG----ADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVL 228 >gi|107028624|ref|YP_625719.1| glutamate racemase [Burkholderia cenocepacia AU 1054] gi|116690217|ref|YP_835840.1| glutamate racemase [Burkholderia cenocepacia HI2424] gi|105897788|gb|ABF80746.1| glutamate racemase [Burkholderia cenocepacia AU 1054] gi|116648306|gb|ABK08947.1| glutamate racemase [Burkholderia cenocepacia HI2424] Length = 285 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 7/234 (2%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + Sbjct: 1 MTNPSHAIAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + L + VIACNTA +R S+ +G P IK AAA + + Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSAT 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G+ +L+T +TL L+ Y + L +E +++ I Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTNSPALRTLLERYI 178 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 + + D +VL CTHYP R L + +D SD+IAR+ AR L Sbjct: 179 QPMLDDG----ADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVL 228 >gi|206889915|ref|YP_002249185.1| glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741853|gb|ACI20910.1| glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 270 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 8/223 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + IFDSG+GGL VL+++ L+P IY+ D PYG + K + S + Sbjct: 3 EKPVGIFDSGVGGLTVLKEIAKLLPNEELIYLGDTARVPYGIRSAETVIKYSIECASFLF 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K +L V+ACNT+ ++ + L+ P +A +G + P ++ A T++G I I+ T AT Sbjct: 63 KKGIKIL-VVACNTSSSVSLEVLKEKLP-IAVIGVIEPGVRAALKATKNGKIGIIGTEAT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I S + + + + VEE I E +++ ++ E + Sbjct: 121 IQSGAYPKKIKSIEPEIEVISKACPLFVPLVEEGILEGSIAELIVERYLK----ELKNSG 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYPL+ ++ + +D+++ I+R + +L Sbjct: 177 IDTLILGCTHYPLLKKTIQKYMEG-IQLVDSAEEISREVKEML 218 >gi|225619324|ref|YP_002720550.1| glutamate racemase [Brachyspira hyodysenteriae WA1] gi|225214143|gb|ACN82877.1| glutamate racemase [Brachyspira hyodysenteriae WA1] Length = 279 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 10/199 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+K+ +MP +++Y+ D+ PYG+ + L +D L + Sbjct: 12 IAVFDSGLGGLTVLKKLIEMMPNENYVYIGDNANIPYGDKSKEEI-INLTLKMTDFLVEQ 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + + +IACNT D L+ + A+ A T++ ISI++T T+ Sbjct: 71 KCKMIIIACNTITACSYDILKQKYHIPVIEVISNAVIDALDKTKNNNISIMATEFTVNSN 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 N I + Q + + L +E Y+ E + EI ++E K +D Sbjct: 131 IYKNKIIEFNKQAKVTQTACKDLCPMIENDWYSY-------ENRLEILKNYLENIDKNSD 183 Query: 194 VIVLACTHYPLIVHVFRQL 212 ++L CTHYP I++ ++L Sbjct: 184 TLILGCTHYPHIINDIKKL 202 >gi|16079734|ref|NP_390558.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168] gi|221310614|ref|ZP_03592461.1| hypothetical protein Bsubs1_14656 [Bacillus subtilis subsp. subtilis str. 168] gi|221314937|ref|ZP_03596742.1| hypothetical protein BsubsN3_14572 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319859|ref|ZP_03601153.1| hypothetical protein BsubsJ_14488 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324139|ref|ZP_03605433.1| hypothetical protein BsubsS_14627 [Bacillus subtilis subsp. subtilis str. SMY] gi|11387238|sp|O05412|MURI2_BACSU RecName: Full=Glutamate racemase 2 gi|1934638|gb|AAB80890.1| YrpC [Bacillus subtilis subsp. subtilis str. 168] gi|2635126|emb|CAB14622.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168] Length = 265 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 8/225 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ +F ++ L Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKE-YIFNAAEFLASQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTPATLR 133 VIACNTA ++ ++LR F +G PA+K A + + +++T TL+ Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NL+ H LV + L VE +A ED+I K ++ + K+ Sbjct: 121 EEKFHNLVKEI---DHHDLVDCLALPGLVE-FAENFDFSEDKIIKYLKNELSSFDLKQYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 IVL CTH+P + F +L VD + S A++ + +L N Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRN 221 >gi|270157815|ref|ZP_06186472.1| glutamate racemase [Legionella longbeachae D-4968] gi|269989840|gb|EEZ96094.1| glutamate racemase [Legionella longbeachae D-4968] Length = 271 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 8/216 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I +FDSG+GGL VL+ +R +P+ F+Y+ D PYG +K+ M + ++ Sbjct: 5 QLAIGVFDSGMGGLTVLRALREGLPQESFVYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPAT 131 ++ L VIACNTA T L+S P M L P A A T++ + +L+T T Sbjct: 65 ERRIKAL-VIACNTATTAALPYLQSMLPDMPVLGVVAPGAAAAVAATKNNQVIVLATETT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + LI + + I+ + +L + EE ++ + +K ++G E Sbjct: 124 IASNAYQQLIAQQLPRAVINTRACSVLVALAEEGMVNNQVAREALKYYLDGFTHE----- 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D ++L CTH+P+ + + P V +D++ + A Sbjct: 179 -DTVLLGCTHFPVFKSLLISILPEGVSIVDSAHATA 213 >gi|294782801|ref|ZP_06748127.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA] gi|294481442|gb|EFG29217.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA] Length = 264 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 25/200 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D K Sbjct: 8 IGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILDFFVKN 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST T Sbjct: 68 NCKLVIVACNTASTAAIDYLRERFP-LPILGIVEAGIKIARKNTKTKNIAVISTKFTAES 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC---------GIKIKEDEIKKEIEGCFI 185 H Y ++ ++ + ++ V+E AC G + ++ ++E+ ++ Sbjct: 127 -------HGYKNKA--KMIDTELI---VKEIACIEFPMMIETGWETFDN--REELLNKYL 172 Query: 186 EKEGKRTDVIVLACTHYPLI 205 + K D +VL CTHYPLI Sbjct: 173 AEIPKNVDTLVLGCTHYPLI 192 >gi|332977227|gb|EGK14022.1| glutamate racemase [Psychrobacter sp. 1501(2011)] Length = 352 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 14/226 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +R +P H++Y AD + PYG A K L + D L Sbjct: 21 IGIFDSGVGGLSVYLHLRQQLPNEHYLYYADTLNVPYGP-RSSAEIKVLSLIAVDWLVAA 79 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACN+A R P + +G VPA+K A + S +++L+T ATL Sbjct: 80 GCKLIVIACNSASAHALPHARQKHPHIPIVGLVPALKPAVLNSNSKNVAVLATKATLDGE 139 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + +I Y +++ V + V G+ + + E + ++ +R D + Sbjct: 140 LLNTVISDYALPANVN-VMKWFDPNLVPWVEAGMPL-DSETPERLKCQLKRFAEQRVDHL 197 Query: 196 VLACTHYPLIVHVFRQLSPWPVDW-------LDNSDSIARRARCLL 234 VL CTHYP FR+ V+ +D+ +IA R + LL Sbjct: 198 VLGCTHYPF----FREFVLAEVESENLGIKVVDSGAAIAARVKALL 239 >gi|321312180|ref|YP_004204467.1| glutamate racemase [Bacillus subtilis BSn5] gi|320018454|gb|ADV93440.1| glutamate racemase [Bacillus subtilis BSn5] Length = 265 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 8/225 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ +F ++ L Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKE-YIFNAAEFLASQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTPATLR 133 VIACNTA ++ ++LR F +G PA+K A + + +++T TL+ Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NL+ H LV + L VE +A ED+I K ++ + K+ Sbjct: 121 EEKFHNLVKEI---DHHDLVDCLALPGLVE-FAENFDFSEDKIIKYLKNELSSFDLKQYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 IVL CTH+P + F +L VD + S A++ + +L N Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRN 221 >gi|291485080|dbj|BAI86155.1| putative glutamate racemase [Bacillus subtilis subsp. natto BEST195] Length = 265 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 8/225 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ +F ++ L Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGRVKE-YIFNAAEFLASQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTPATLR 133 VIACNTA ++ ++LR F +G PA+K A + + +++T TL+ Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NL+ H LV + L VE +A ED+I K ++ + K+ Sbjct: 121 EEKFHNLVKEI---DHHDLVDCLALPGLVE-FAENFDFSEDKIIKYLKNELSSFDLKQYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 IVL CTH+P + F +L VD + S A++ + +L N Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRN 221 >gi|206560649|ref|YP_002231414.1| glutamate racemase [Burkholderia cenocepacia J2315] gi|198036691|emb|CAR52590.1| putative glutamate racemase [Burkholderia cenocepacia J2315] Length = 285 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + +R + + + L + Sbjct: 16 VGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFITERTLAI-GEWLARE 74 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA +R S+ +G P IK AAA + +G+ +L+T +TL Sbjct: 75 GAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSATGVAGVLATQSTLNSP 133 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ Y + L +E +++ I+ + D + Sbjct: 134 RFQALLDRYGAGRRFICQPGHGLVEAIERGDTNSPALRALLERYIQPMLDDG----ADTL 189 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 VL CTHYP R L + +D SD+IAR+ AR L Sbjct: 190 VLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVL 228 >gi|297587459|ref|ZP_06946103.1| possible glutamate racemase [Finegoldia magna ATCC 53516] gi|297574148|gb|EFH92868.1| possible glutamate racemase [Finegoldia magna ATCC 53516] Length = 261 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 19/226 (8%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++K N I DSG+GGL V +K++ LMP+ +IY AD PYG+ + +++ + Sbjct: 4 KQKPYNKIGFVDSGLGGLTVFKKVKKLMPDKEYIYFADSANVPYGS----KTRDQMLMIS 59 Query: 69 SDIL---DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLIS 124 +I+ ++ Q L V+ACNT ++ D ++S + +G V +K A T + + Sbjct: 60 ENIVRFFNEQQIDLLVVACNTLTSIALDYMKS-IANFDIIGVVEYGVKSAIKTTSNKKVG 118 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIEG 182 +++T AT+ + L + Q + + S S VEE C K D+I +++E Sbjct: 119 VIATKATVD----NGLYKKLLEQQGVEVCQSACFDFVSFVEE-DCKDK---DKILEKVEE 170 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D I+L CTHYP+++ +Q + + ++D +DS++ Sbjct: 171 YLKPIVDFGADTIILGCTHYPILIEYLKQYTGENITFVDPADSLSE 216 >gi|47776279|dbj|BAD20743.1| glutamate racemase [Bacillus subtilis] Length = 265 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 8/225 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ +F ++ L Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGRVKE-YIFNAAEFLASQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTPATLR 133 VIACNTA ++ ++LR F +G PA+K A + + +++T TL+ Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NL+ H LV + L VE +A ED+I K ++ + K+ Sbjct: 121 EEKFHNLVKEI---DHHDLVDCLALPGLVE-FAENFDFSEDKIIKYLKNELSSFDLKQYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 IVL CTH+P + F +L VD + S A++ + +L N Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRN 221 >gi|261408244|ref|YP_003244485.1| glutamate racemase [Paenibacillus sp. Y412MC10] gi|261284707|gb|ACX66678.1| glutamate racemase [Paenibacillus sp. Y412MC10] Length = 258 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 18/221 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GGL VL +P F+++AD + PYG +K + I+ + Sbjct: 3 IAFFDSGLGGLTVLTAAMKKLPHEDFLFLADTLHVPYGTKAKEDVKAYIHQAMETIMQEE 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133 + V+ACNTA ++ +LR +P + +G PA+K A ++ I +L+TP TL+ Sbjct: 63 VKAI-VVACNTATSMAISDLRKAYP-IPVIGMEPAVKPAVEINRASGKRILVLATPLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + +L+ S +H+V S L VE C + EI + K+ + D Sbjct: 121 ESKYKDLVRRVDS---MHIVDSQPLPELVEH--C----EALNFDPEIMNAYFTKKFEAFD 171 Query: 194 V-----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + IVL CTHYP + L P + +D S+ R Sbjct: 172 LNEYGTIVLGCTHYPFYKRILSDLLPDHIRIIDGSEGTVNR 212 >gi|317124440|ref|YP_004098552.1| glutamate racemase [Intrasporangium calvum DSM 43043] gi|315588528|gb|ADU47825.1| glutamate racemase [Intrasporangium calvum DSM 43043] Length = 286 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 11/204 (5%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D P + + DSGIG L +R L P+ + D PYG +++ Sbjct: 7 DLAPMTTRPPRRVAFVDSGIGLLGYADALRALRPDLELVLALDPDHMPYGPRSPGEVRE- 65 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGL 122 L+ + + +PV V+ACNTA + LR+ P + +G VPAI+ AA T G Sbjct: 66 LILASAAAAAELEPVALVVACNTASVHGLEALRAELEPGLPVIGTVPAIRPAA--TTGGP 123 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +SI ST AT Y L+ ++ S+ H ++++ LA VE + EI + I Sbjct: 124 VSIWSTAATSSSDYLRGLVDAFASEVETHSIAALGLAEAVE------AVDPAEIDRAIGA 177 Query: 183 CFIEKEGKRTDVIVLACTHYPLIV 206 E T +VL CTHY L+ Sbjct: 178 ALAETPAD-TRALVLGCTHYGLVA 200 >gi|193214141|ref|YP_001995340.1| glutamate racemase [Chloroherpeton thalassium ATCC 35110] gi|193087618|gb|ACF12893.1| glutamate racemase [Chloroherpeton thalassium ATCC 35110] Length = 278 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 6/225 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I IFDSGIGGL V++K+R +P IY D PYG + +R + Sbjct: 13 KAERPIGIFDSGIGGLTVVRKIRERLPNERLIYFGDTARVPYGT-KSQVTVRRYAAEDTR 71 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129 +L KYQP + V+ACNT L D + + LG + A A Y+Q+ I ++ T Sbjct: 72 LLLKYQPKMIVVACNTVSALALDVVEHESGGLPVLGVLKAGANLAVKYSQTKHIGVIGTI 131 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ I + ++ + + EE G I K E Sbjct: 132 ATISSNAYPLEISKLDCEAEVYSKACPLFVPLAEE---GF-ISHQATKLIATEYLTELLV 187 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 K+ D +VL CTHYP++ + +++ V +D+++++A LL Sbjct: 188 KKIDSLVLGCTHYPILKSMLAEVTGKNVVIIDSAEAVAMEVENLL 232 >gi|329922868|ref|ZP_08278384.1| glutamate racemase [Paenibacillus sp. HGF5] gi|328941641|gb|EGG37926.1| glutamate racemase [Paenibacillus sp. HGF5] Length = 258 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 18/221 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GGL VL +P F+++AD + PYG +K + I+ + Sbjct: 3 IAFFDSGLGGLTVLTAAMKKLPHEDFLFLADTLHVPYGTKAKEDVKAYIHQAMGIIMQEE 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133 + V+ACNTA ++ +LR +P + +G PA+K A ++ I +L+TP TL+ Sbjct: 63 VKAI-VVACNTATSMAISDLRKAYP-IPVIGMEPAVKPAVEINRASGKRILVLATPLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + +L+ S +H+V S+ L VE C + EI + K+ + D Sbjct: 121 ESKYKDLVRRVDS---MHIVDSLPLPELVEH--C----EALNFDPEIMNAYFTKKFEAFD 171 Query: 194 V-----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + IVL CTHYP + L P + +D S+ R Sbjct: 172 LNEYGTIVLGCTHYPFYKRILSDLLPDHIRIIDGSEGTVNR 212 >gi|158321093|ref|YP_001513600.1| glutamate racemase [Alkaliphilus oremlandii OhILAs] gi|158141292|gb|ABW19604.1| glutamate racemase [Alkaliphilus oremlandii OhILAs] Length = 274 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 9/230 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL + +P +IY D PYG +KK L F D L + Sbjct: 10 IGVFDSGVGGISVLADLIHQLPNEQYIYFGDSGNAPYGVRSKEEVKK-LSFNVVDKLLNF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA +++ +ELR + +G PA+K A G I +++TP TLR Sbjct: 69 NIKAVVVACNTATSIVIEELRKRL-DIPVIGMEPALKPAIELNNFGKIVVMATPVTLREK 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 ++LI + + L +E+ + EI+ I + + + Sbjct: 128 KFNDLIMKLTDTDRVVKMPCPGLVEIIEQQGD----HDAEIEAYIRRIYASYQLDTVGTV 183 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQT 242 VL CTHY I + ++ +D + AR + LL + +NT T Sbjct: 184 VLGCTHYVFIKDMIAKVVGPEATVIDGNFGTARHVKELLKQSEALNTDGT 233 >gi|260435366|ref|ZP_05789336.1| glutamate racemase [Synechococcus sp. WH 8109] gi|260413240|gb|EEX06536.1| glutamate racemase [Synechococcus sp. WH 8109] Length = 265 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSG+GGL VL+++ +Y+ D PYGN + ++ R+ L Q Sbjct: 9 FDSGLGGLTVLRRVLERHGPVPCVYLGDTARVPYGNRQPDDIR-RIAAEVVGWLRNQQVS 67 Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNT L +D E ++ P + +GA AAA ++ + +L+TPAT+ Sbjct: 68 TVVMACNTTNALARDVAEGQAGVPLIGLIGA------AAAMVETRRVGVLATPATV---- 117 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCFIEKE 188 S + + ++ S V E AC ++ D++++ + Sbjct: 118 --------ASSAYRASIEALHPGSVVIEQACPAFVPLIEAGEMNSDDLRRAAQAYLEPLL 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D IVL CTHYPL+V + RQL P V +D + +AR+ +L Sbjct: 170 AASVDSIVLGCTHYPLLVPLLRQLVPESVQIIDPAIGVARQLDAIL 215 >gi|88801356|ref|ZP_01116884.1| glutamate racemase [Polaribacter irgensii 23-P] gi|88782014|gb|EAR13191.1| glutamate racemase [Polaribacter irgensii 23-P] Length = 266 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 17/258 (6%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF---SDILDKY 75 FDSGIGG V +++ L+P + IY++D PYG E A ++ L +D L K Sbjct: 11 FDSGIGGTSVWKEVIKLLPNENTIYLSDSENAPYG--EKSA--DEIILLSRKNTDFLLKE 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L ++ACNTA T LR + ++ F+G PAIK A+ T++ I +L+T TL Sbjct: 67 NCKLIIVACNTATTNAITFLRDAY-AIPFIGIEPAIKPASLITKTNKIGVLATQGTLNSA 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + I + L + +E ++ +E + + D + Sbjct: 126 LFEKTSLPIRNTIQIQETNGKGLVTLIENG----QLNSEETRALLTVYLAPMLANNIDSL 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDDHALFL 252 VL CTHYP ++ R++ V +D+ +++A++ + +L + +N+ Q +H L++ Sbjct: 182 VLGCTHYPYLIPQIREIIGPDVQIIDSGEAVAKQTKAILLKHKILNSDQKHTA-NHKLYI 240 Query: 253 SGKPDIAMRRLMQGFGLK 270 + K A+ +L++ +K Sbjct: 241 N-KDKKALEKLIEDSPVK 257 >gi|260221040|emb|CBA29208.1| hypothetical protein Csp_A10990 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 147 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 1/139 (0%) Query: 11 KLQN-SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 KL N I +FDSG+GGL VL+ +R +P F+YVAD PYG +D L +R + Sbjct: 3 KLSNCPIGVFDSGVGGLSVLRALRAELPHEKFVYVADSGHAPYGERDDDYLIERSHTIVR 62 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 D++Q V+ACNTA LR P + +G PA+K A +++ +I +++T Sbjct: 63 WFRDRHQIKALVVACNTATAAAIHVLREAHPELPIIGIEPALKPAVVQSKTKVIGVMATR 122 Query: 130 ATLRRTYTSNLIHSYVSQC 148 +TL L+ S +Q Sbjct: 123 STLNSEKFKRLLTSLENQA 141 >gi|149924170|ref|ZP_01912547.1| glutamate racemase [Plesiocystis pacifica SIR-1] gi|149814971|gb|EDM74531.1| glutamate racemase [Plesiocystis pacifica SIR-1] Length = 276 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 2/213 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P FIY+ D PYG + R + +L + Sbjct: 10 IGVFDSGVGGLTVLRALRRRLPNERFIYLGDTARLPYGTKSPETV-ARYAEKAAGVLVER 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L VIACNTA + L F + +G + P A A T+S + ++ T T+ Sbjct: 69 GIKLLVIACNTASAVAVSRLAERFAPVPVIGVIEPGAWAACAATRSDRVLVIGTEGTING 128 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I + V+ + + EE I E ++ + E +R D Sbjct: 129 GAYQRAIARRRPAIVVRSVACPLFVALAEEGWVRGPIPEAIARRYLAVELSGNEDERVDT 188 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 +VL CTH+P++ V +++ V +D++++ A Sbjct: 189 LVLGCTHFPVLRGVLQEVCGPEVSLVDSAETTA 221 >gi|317404652|gb|EFV85049.1| glutamate racemase [Achromobacter xylosoxidans C54] Length = 236 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 15/223 (6%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I ++DSG+GGL VL+ +R +P H +YVAD PYG +++R + + +D L Sbjct: 5 HPIGVYDSGVGGLSVLRAIREALPHEHLLYVADSAHVPYGEKTQQYVQQRALAI-ADYLV 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA LR+ P +A +G PAIK AA T+SG++ + +T TL Sbjct: 64 SRRANAMVVACNTATAAAIAALRARHPDLAIIGVEPAIKPAAHLTRSGVVGVFATTGTLA 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-----EKE 188 + L+ + IL E+ ++++ EI+ E + E Sbjct: 124 SPKFAALVQREAPEIR-------ILFRPCPEWV--LQVERGEIQGEAAARVVAAPVHELL 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 + D +VL CTH+P + + + V L+ +ARR R Sbjct: 175 AQGADALVLGCTHFPFLHDAIQAAAGPAVPLLETGGPVARRLR 217 >gi|145220321|ref|YP_001131030.1| glutamate racemase [Prosthecochloris vibrioformis DSM 265] gi|145206485|gb|ABP37528.1| glutamate racemase [Chlorobium phaeovibrioides DSM 265] Length = 271 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 10/213 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q+ I IFDSG+GGL VL+ M+ L+P +Y D PYG + +R + IL Sbjct: 8 QSPIGIFDSGVGGLTVLKAMQKLLPSEQLLYFGDTARVPYGT-KSQVTIRRYAEEDTRIL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 ++QP + ++ACNT L D + T + LG + A A T++G I ++ T AT Sbjct: 67 LRHQPKMIIVACNTVSALALDVVEKTADPLPVLGVLEAGADTAVEVTRTGRIGVIGTQAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEG 189 + + I+ + + + + EE G+ E I +E + +E Sbjct: 127 ISSNAYAYAINQASADSEVFSTACPLFVPLAEE---GMLNNEATRLIAREYLAPLLAEE- 182 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 D +VL CTHYP++ + + + V +D+ Sbjct: 183 --IDTLVLGCTHYPILRTIIEETAGTGVTIIDS 213 >gi|302672271|ref|YP_003832231.1| glutamate racemase MurI [Butyrivibrio proteoclasticus B316] gi|302396744|gb|ADL35649.1| glutamate racemase MurI [Butyrivibrio proteoclasticus B316] Length = 272 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 9/242 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSGIGGL VL + +P +I+ AD PYG + + + ++DK Sbjct: 2 KIGIFDSGIGGLSVLHEAYHRLPGQEYIFYADTDHVPYGTKTPEQIVEFAIDNAQFLIDK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA ++ ELRS F + LG PA+K A T I +++TP T+R Sbjct: 62 GAEAL-VVACNTATSVAIKELRSRF-DIPILGMEPAVKPAVEGTDDKRIMVIATPVTIRE 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +L+H + + L++ R+ E+A + +E+ I G F + Sbjct: 120 DKLKDLLHRVDEEHRVDLLA----MPRLVEFAEKEQFDTEEVVGYIRGRFANFDPTDYCA 175 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLD-NSDSIARRARCLLPRINTHQ-TRV-FDDHALF 251 +VL CTH+ V +D N ++ A L +N+ Q T V FDD+ Sbjct: 176 LVLGCTHFNYFKPVLEDFFGKDTLLVDGNYGTVHHLADVLGLEMNSDQDTEVYFDDYHKM 235 Query: 252 LS 253 L Sbjct: 236 LD 237 >gi|282891233|ref|ZP_06299736.1| hypothetical protein pah_c048o068 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498926|gb|EFB41242.1| hypothetical protein pah_c048o068 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 280 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 11/224 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD--I 71 N I +FDSGIGGL V++ + L+P +Y D FPYGN +A + + + ++ Sbjct: 11 NPIGMFDSGIGGLTVMRAVMQLLPYESVLYFGDTAHFPYGN---NAAETIIQYSLANAHF 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + L VIACNTA L+ F P+I+ A A TQSG I++L T T Sbjct: 68 LMEQDIKLLVIACNTASAFAFSTLQDQFLIPIIDVISPSIEAAIAQTQSGSIAVLGTKGT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R I + Q + ++ +LA VEE + E + I +++ K Sbjct: 128 IRSGVYKQKILDLMPQARVVSLACPLLAPLVEE-----QWLEHPATRLIVQEYLQPLKKS 182 Query: 192 -TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYPL+ + + V +D++ + A + +L Sbjct: 183 DVDTLILGCTHYPLLKSLIEEEMEGQVKIIDSASACALKVEEIL 226 >gi|239827939|ref|YP_002950563.1| glutamate racemase [Geobacillus sp. WCH70] gi|259509915|sp|C5D5M9|MURI_GEOSW RecName: Full=Glutamate racemase gi|239808232|gb|ACS25297.1| glutamate racemase [Geobacillus sp. WCH70] Length = 264 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 24/267 (8%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I + DSG+GGL V +++ +P+ +Y+ D PYG +++ + ++ Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKERIVYLGDTARCPYGPRPKEEIRQ-FTWEMTNY 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + VIACNTA ++ DE+R + LG V P + A T++G I ++ T Sbjct: 60 LLRYNIKMLVIACNTATAVVLDEIREQL-DIPVLGVVHPGARAALKATKNGHIGVIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEG 182 T++ S + + S+ RVE AC + +E +K + Sbjct: 119 TVK------------SGAYEKALKSINHRVRVESLACPKFVPLVESGNFEGEEARKIVAE 166 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + DV++L CTHYPL+ + ++ V + + D AR +L + T Sbjct: 167 SLEPFKSSNMDVLILGCTHYPLLSPLIKEYMGKRVKLICSGDETAREVSAILHHSHLLYT 226 Query: 243 RVFD-DHALFLSGKPDIAMRRLMQGFG 268 + +H F +G ++ + + FG Sbjct: 227 GQREAEHLFFTTGSKELFQKIASKWFG 253 >gi|78357785|ref|YP_389234.1| glutamate racemase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220190|gb|ABB39539.1| glutamate racemase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 285 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 7/233 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M+I++ C+ + I +FDSG+GGL VL+ +R MP +Y+ D PYG + Sbjct: 1 MQIESG-CDSRRDLPIGMFDSGVGGLTVLKALRRRMPCESILYLGDTARLPYGTKSAETV 59 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + + ++++ +L V+ACNT + LR+ +P + +G V P + + + Sbjct: 60 TRYALQASARLVERDIKLL-VVACNTVSATALEPLRNAYPGIPVIGVVQPGAQASCRASA 118 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 +G I++++T +T+R IH+ + EE + E + Sbjct: 119 TGRIAVIATESTIRGRAYERAIHAIRPDAQTTGAPCPLFVPLAEEGWLDGPLVEGIAARY 178 Query: 180 IEGCFIEKEG----KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + F G + D +VL CTH+PL+ R + V +D++ A+ Sbjct: 179 LNPIFHPASGSGRPETPDCLVLGCTHFPLLAGAIRNVIGDGVTIVDSAAITAK 231 >gi|313123221|ref|YP_004033480.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279784|gb|ADQ60503.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 261 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72 I +FDSG GGL VL ++ LMP +++ D PYG E + L KR++ +++ Sbjct: 10 IGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKKEVYQLAKRVV---DELI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + V + L +E+ + I + +E GK Sbjct: 126 EQDKFNQLVAECAEPGQVLKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYVGKAA 181 Query: 193 DVIVLACTHYPLIVHVFRQL 212 V VL CTH+P +++ Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200 >gi|104773633|ref|YP_618613.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422714|emb|CAI97341.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 261 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72 I +FDSG GGL VL ++ LMP +++ D PYG E + L KR++ +++ Sbjct: 10 IGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVV---DELI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + V + L +E+ + I + +E GK Sbjct: 126 EQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYVGKAA 181 Query: 193 DVIVLACTHYPLIVHVFRQL 212 V VL CTH+P +++ Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200 >gi|93007073|ref|YP_581510.1| glutamate racemase [Psychrobacter cryohalolentis K5] gi|92394751|gb|ABE76026.1| glutamate racemase [Psychrobacter cryohalolentis K5] Length = 333 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 14/226 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL V + +P +IY AD + PYGN + +K F + + Y Sbjct: 50 IGLFDSGIGGLSVYLHLAQQLPNERYIYYADTLNVPYGNRDSDDIK---TFTLTAVEWLY 106 Query: 76 QP--VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Q L VIACN+A R +P + +G VPA+K A ++SG +++L+T ATL Sbjct: 107 QQGCKLIVIACNSASAYALQTARCHYPQLPIVGLVPALKPAVLASKSGHVAVLATKATLN 166 Query: 134 RTYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +++I + S + L VE ++++++ K+G Sbjct: 167 GKLLNDVIATIASPSATRVTKYFDPQLVPWVESGMPENSETAQNLRQQLQ--VFAKDG-- 222 Query: 192 TDVIVLACTHYPLIVHVFRQL---SPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYP Q + +D+ +IA R + LL Sbjct: 223 VDQLVLGCTHYPFFKDFVMQAIESQRLSMQVVDSGQAIAERVKQLL 268 >gi|303256754|ref|ZP_07342768.1| glutamate racemase [Burkholderiales bacterium 1_1_47] gi|330999103|ref|ZP_08322824.1| glutamate racemase [Parasutterella excrementihominis YIT 11859] gi|302860245|gb|EFL83322.1| glutamate racemase [Burkholderiales bacterium 1_1_47] gi|329575492|gb|EGG57031.1| glutamate racemase [Parasutterella excrementihominis YIT 11859] Length = 265 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 7/238 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V+ +R +P IY D + PYG+ +K+R + + ++ K Sbjct: 1 MFDSGLGGLSVMHAVRDALPGEDIIYYGDCLYAPYGDRNSEYIKERCLAIGRFLISKGAK 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V++CNTA + +R TF + +G PAIK AAA T++G++ +++T T+ Sbjct: 61 AI-VVSCNTATAEGVNTMRDTF-DIPIIGIEPAIKPAAAATKTGVVGVIATTRTITSERY 118 Query: 138 SNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 L+ + ++ + V L VE + I+K + I++ G D +V Sbjct: 119 LRLVREFAGTKVKVVSVPCPGLMECVESGDWDSFKTQKLIEKYLHP--IKRAG--ADKLV 174 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 L CTHYP + +V ++ + +D S ++AR + L + ++SG Sbjct: 175 LGCTHYPFLSNVLKRELGSGTELIDPSAAVARELKHQLSKRGLLSDGAKGKEVFYISG 232 >gi|315925652|ref|ZP_07921862.1| glutamate racemase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621193|gb|EFV01164.1| glutamate racemase [Pseudoramibacter alactolyticus ATCC 23263] Length = 258 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 13/228 (5%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I +FDSG+GG+ VL+ + +P +F++ D PYG ++ + Sbjct: 3 KAFNDYIGVFDSGVGGISVLKHLTEQLPNENFLFYGDSANAPYGEKSVEQVRALAFDIVR 62 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +++ + VIACNTA + ELR F + +G PA+K AA + + +++TP Sbjct: 63 RMVEDGVKAI-VIACNTATSAAAKELRCAF-ELPIIGVEPALKPAATASGRHRVLVMATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE---GCFIE 186 TL +L Y S LA R+E ++ ++ IE GC+ Sbjct: 121 VTLSLQKYRDLWDRYAGYAECVSCSCPGLAKRIERG----RLDAPDLTALIEKLIGCYR- 175 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 R D +VL CTHYP + R + V D A + +L Sbjct: 176 ---GRVDSVVLGCTHYPFVSDQIRGVLGSHVTLYDGGAGTAGELKNVL 220 >gi|301166907|emb|CBW26486.1| putative glutamate racemase [Bacteriovorax marinus SJ] Length = 256 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 6/193 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI IFDSGIGG +L+K+ L PE Y+AD PYGN + R +L +++ K Sbjct: 8 SIGIFDSGIGGFSILKKIHELAPELEVYYIADQGFAPYGNKSRKEVIDRCHYLCHELM-K 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132 + L V+ACNTA + DELR+TF ++ F+G P + + +T +S +++T Sbjct: 67 FDLDLIVVACNTATGVAIDELRNTF-TIPFVGVEPFVNALSKHTWKESDRACVITTELMS 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L++ + + LA+ VE++ +E +K + E F+ + Sbjct: 126 KSERFQKLVNRLDPDKRLFYKVTPGLATIVEDFFINKNEEELNLKLKEELSFVGESSYSH 185 Query: 193 DVIVLACTHYPLI 205 ++L CTHYPLI Sbjct: 186 --LILGCTHYPLI 196 >gi|325684586|gb|EGD26745.1| glutamate racemase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 261 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72 I +FDSG GGL VL ++ LMP +++ D PYG E + L KR++ +++ Sbjct: 10 IGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVV---DELI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + V + L +E+ + I + +E GK Sbjct: 126 EQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYVGKAA 181 Query: 193 DVIVLACTHYPLIVHVFRQL 212 V VL CTH+P +++ Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200 >gi|260887883|ref|ZP_05899146.1| glutamate racemase [Selenomonas sputigena ATCC 35185] gi|260862389|gb|EEX76889.1| glutamate racemase [Selenomonas sputigena ATCC 35185] Length = 281 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 5/218 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I +FDSG+GG+ VL+++ L+P+ FIY D PYG + ++ L D Sbjct: 27 KKEQPIGVFDSGLGGISVLRELVSLLPKEDFIYFGDAAHAPYGERTEREIRA-LTTAQID 85 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + V+ACNTA + LR + + +G PA+K A + + +++T A Sbjct: 86 RMAAEGVKAVVLACNTATSAACAPLRRRYRQIPIIGMEPALKPAILSGEKPRVVVMATHA 145 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR+ + L+ + I + + VE +I+ + + +E F+ K Sbjct: 146 TLRQKKFARLMERFKDAGEIVKLPCPEIVEFVERG----EIRSAALHEYLEERFLSVSQK 201 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTH+P + + + V D + AR Sbjct: 202 PIDCVVLGCTHFPFVRDAIQDVVGQAVQIFDGAAGTAR 239 >gi|116513625|ref|YP_812531.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092940|gb|ABJ58093.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 261 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72 I +FDSG GGL VL ++ LMP +++ D PYG E + L KR++ +++ Sbjct: 10 IGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVV---DELI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + V + L +E+ + I + +E GK Sbjct: 126 EQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYVGKAA 181 Query: 193 DVIVLACTHYPLIVHVFRQL 212 V VL CTH+P +++ Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200 >gi|148652096|ref|YP_001279189.1| glutamate racemase [Psychrobacter sp. PRwf-1] gi|148571180|gb|ABQ93239.1| glutamate racemase [Psychrobacter sp. PRwf-1] Length = 340 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V ++ +P+ HFIY AD + PYG + ++L D L Sbjct: 37 IGIFDSGVGGLSVYMHLKQALPQEHFIYYADTLNVPYGPRPSSEI-QQLSLTAVDWLVAA 95 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACN+A R +P + +G VPA+K A + S +++L+T ATL Sbjct: 96 GCKLVVIACNSASAHALHLARQKYPHIPIVGLVPALKPAVLNSTSKNVAVLATKATLDGP 155 Query: 136 YTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + +I Y + ++ L VE G+ + D + ++ + ++ D Sbjct: 156 LLNTVIDEYARPSQVTVIKWFDPELVPWVE---AGMPMDSDTPMR-LKQQLYQFAQQQVD 211 Query: 194 VIVLACTHYPLIVH-VFRQLSPWPVDW--LDNSDSIARRARCLL 234 +VL CTHYP V +++ +D +D+ +IA R + LL Sbjct: 212 HLVLGCTHYPFFREFVLAEVAKQGLDIKVVDSGAAIAARVKALL 255 >gi|319953665|ref|YP_004164932.1| glutamate racemase [Cellulophaga algicola DSM 14237] gi|319422325|gb|ADV49434.1| Glutamate racemase [Cellulophaga algicola DSM 14237] Length = 259 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 8/243 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE-DHALKKRLMFLFSDILDK 74 I IFDSG+GG + +++ L+P IY+AD PYG D L L ++ L Sbjct: 6 IGIFDSGVGGTSIWKEIHKLLPNEDTIYLADSKNAPYGEKSADEIL--NLSIKNTEFLLN 63 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA T LR T+ + F+G PAIK AA ++S I +L+T TL Sbjct: 64 LGCKIIVIACNTATTNAIAYLRKTY-DIPFIGIEPAIKPAALNSKSKTIGVLATKGTLTS 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + +Y + L +E K+ E++ + + D Sbjct: 123 ALFNTTSKNYSEGITVIDQDGEGLVPLIESG----KVNGVEVRNLLLKYLNPMIHQGIDY 178 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHYP ++ V +++ V +D+ +++A+ + +L + + H + + Sbjct: 179 LVLGCTHYPYLIPVIQEIVSDKVTIIDSGEAVAKHTKSILEKFKLSASDQLSKHQFYSNK 238 Query: 255 KPD 257 D Sbjct: 239 NAD 241 >gi|78221768|ref|YP_383515.1| glutamate racemase [Geobacter metallireducens GS-15] gi|123572676|sp|Q39Y84|MURI_GEOMG RecName: Full=Glutamate racemase gi|78193023|gb|ABB30790.1| glutamate racemase [Geobacter metallireducens GS-15] Length = 276 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 7/216 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ +P+ IY D PYG + + + + S ++ Sbjct: 10 KAIGIFDSGVGGLTVLKEIIKALPQEDTIYFGDTARVPYGTKSPETVTRYSLEIASFLVH 69 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + +L V+ACNTA + L+ T S+ +G + P ++AAA T+SG + ++ T T+ Sbjct: 70 RDIKLL-VVACNTASACALEALQQTL-SIPVVGVIEPGARRAAAVTRSGRVGVIGTEGTI 127 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + + I + + + + EE ++ + + G + + G Sbjct: 128 RSSAYAKAIKRINPEVEVVTRACPLFVPLAEEGWTDNEVAHLTARTYLSG--LREAG--V 183 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYPL+ V + V +D+++ AR Sbjct: 184 DTLVLGCTHYPLLKRVIGETIGEEVKLVDSAEETAR 219 >gi|78184894|ref|YP_377329.1| glutamate racemase [Synechococcus sp. CC9902] gi|78169188|gb|ABB26285.1| glutamate racemase [Synechococcus sp. CC9902] Length = 262 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 21/246 (8%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSGIGGL VL+++ IY+ D PYG+ ++ + + + D+ Q Sbjct: 8 FDSGIGGLTVLRQVLERHGPVQCIYLGDTARVPYGSRSAPEIRLIAAEVVAWLRDQ-QVS 66 Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNT L +D E ++ P + +GA AAA Q+ + +L+TPAT+ Sbjct: 67 TVVMACNTTNALARDVAEGQAGGPVIGLIGA------AAAMVQTSRVGVLATPATV---- 116 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKRTD 193 S S + H ++++ E+ I+ + DE+++ + + Sbjct: 117 ASEAYRSSIEALH---PGTLVVEQACPEFVPLIESGDLSSDELRRTAKEYLQPLLKASVE 173 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHALF 251 IVL CTHYPL+ V RQL P V +D + +AR+ +L P+ + + DD Sbjct: 174 SIVLGCTHYPLLEPVLRQLLPDSVQLIDPAVGVARQLDSVLGAPKPSVGEGLHLDDCRFC 233 Query: 252 LSGKPD 257 ++ PD Sbjct: 234 VTADPD 239 >gi|330838748|ref|YP_004413328.1| Glutamate racemase [Selenomonas sputigena ATCC 35185] gi|329746512|gb|AEB99868.1| Glutamate racemase [Selenomonas sputigena ATCC 35185] Length = 283 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 5/218 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I +FDSG+GG+ VL+++ L+P+ FIY D PYG + ++ L D Sbjct: 29 KKEQPIGVFDSGLGGISVLRELVSLLPKEDFIYFGDAAHAPYGERTEREIRA-LTTAQID 87 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + V+ACNTA + LR + + +G PA+K A + + +++T A Sbjct: 88 RMAAEGVKAVVLACNTATSAACAPLRRRYRQIPIIGMEPALKPAILSGEKPRVVVMATHA 147 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR+ + L+ + I + + VE +I+ + + +E F+ K Sbjct: 148 TLRQKKFARLMERFKDAGEIVKLPCPEIVEFVERG----EIRSAALHEYLEERFLSVSQK 203 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTH+P + + + V D + AR Sbjct: 204 PIDCVVLGCTHFPFVRDAIQDVVGQAVQIFDGAAGTAR 241 >gi|118475058|ref|YP_891779.1| glutamate racemase [Campylobacter fetus subsp. fetus 82-40] gi|166231031|sp|A0RNJ6|MURI_CAMFF RecName: Full=Glutamate racemase gi|118414284|gb|ABK82704.1| glutamate racemase [Campylobacter fetus subsp. fetus 82-40] Length = 253 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 8/206 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL +L + FIY AD+ PYG + RL L Sbjct: 3 IAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSKDEI-IRLCLNCVQFLTNL 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA + ELRS+F S+ +G PA+K G I +++TPAT+ Sbjct: 62 SVDMIVIACNTATSAAITELRSSF-SVPIIGMEPAVKLGV--NAGGDILVVATPATISGN 118 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 S+LIH + HL++ ++ E+A ++ E+ K ++ + + ++ Sbjct: 119 KLSDLIHKVNLESKTHLLA----LPKLVEFAQNMEFDSLEVLKYLKDEISKFDLSNISLL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLD 221 VL CTH+ FR + P +D Sbjct: 175 VLGCTHFNYFKDSFRAILPNKTGIID 200 >gi|237725975|ref|ZP_04556456.1| glutamate racemase [Bacteroides sp. D4] gi|229435783|gb|EEO45860.1| glutamate racemase [Bacteroides dorei 5_1_36/D4] Length = 281 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 45/280 (16%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + + S + + Sbjct: 12 IGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQAVSKLFELG 71 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 P L ++ACNTA T+ + L + LG + P + T+S + IL+T Sbjct: 72 CP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRSRHVGILATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186 T++ SY+ + IH +S I+ V AC + ++ +E + E F++ Sbjct: 131 GTIKS-------ESYLLE--IHKLSPDIV---VTGEACPMWVSLVENNEYQSEGADYFVK 178 Query: 187 KEGKR-------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--- 236 + R D I+L CTHYPL++ RQ +P + + + +AR + L R Sbjct: 179 QHINRLLDKDPMIDTIILGCTHYPLLLDKIRQFTPGHIRIIAQGEYVARSLQDYLNRHPE 238 Query: 237 -------------INTHQTRVFDDHALFLSGKPDIAMRRL 263 + T F++ A G+ DI + + Sbjct: 239 MDARCEKGGKCRFLTTESENKFEESASIFLGRQDIKVESI 278 >gi|220930761|ref|YP_002507670.1| glutamate racemase [Clostridium cellulolyticum H10] gi|220001089|gb|ACL77690.1| glutamate racemase [Clostridium cellulolyticum H10] Length = 258 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 27/253 (10%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I DSG GG+ VL + +P+ ++IY AD PYG +++ + ++ Sbjct: 4 DKIGFLDSGFGGITVLSEALRQLPKENYIYYADIEHVPYGTKTKEEVRQYVFQAVEFMVS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L V+ACNTA ++ ELR+ + LG PA+K A + +L+T TLR Sbjct: 64 QGIKAL-VVACNTATSIAVRELRNMY-EFPILGMEPAVKPAVQNGNGKRVLVLATALTLR 121 Query: 134 RTYTSNLIHSYVSQCHI----------HLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 NL+ V Q H+ L +M+ +Y I + IKK+++G Sbjct: 122 EEKFHNLVQR-VDQEHVVDYLPFPELVELAENMVF-----DYEKVIPV----IKKKLDGY 171 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + VL CTH+P+ ++ F+++ P +D +D S+ R + LL + T Sbjct: 172 NL----NNYKTFVLGCTHFPIYINAFKEVLPPFIDIIDGSEGTIRYLKLLLEERHLISTN 227 Query: 244 VFDDHALFL-SGK 255 + + +F SG+ Sbjct: 228 INGGNIVFFDSGR 240 >gi|212695391|ref|ZP_03303519.1| hypothetical protein BACDOR_04940 [Bacteroides dorei DSM 17855] gi|237711572|ref|ZP_04542053.1| glutamate racemase [Bacteroides sp. 9_1_42FAA] gi|265753000|ref|ZP_06088569.1| glutamate racemase [Bacteroides sp. 3_1_33FAA] gi|212662026|gb|EEB22600.1| hypothetical protein BACDOR_04940 [Bacteroides dorei DSM 17855] gi|229454267|gb|EEO59988.1| glutamate racemase [Bacteroides sp. 9_1_42FAA] gi|263236186|gb|EEZ21681.1| glutamate racemase [Bacteroides sp. 3_1_33FAA] Length = 281 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 45/280 (16%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + + S + + Sbjct: 12 IGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQAVSKLFELG 71 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 P L ++ACNTA T+ + L + LG + P + T+S + IL+T Sbjct: 72 CP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRSRHVGILATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186 T++ SY+ + IH +S I+ V AC + ++ +E + E F++ Sbjct: 131 GTIKS-------ESYLLE--IHKLSPDIV---VTGEACPMWVSLVENNEYQSEGADYFVK 178 Query: 187 KEGKR-------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--- 236 + R D I+L CTHYPL++ RQ +P + + + +AR + L R Sbjct: 179 QHINRLLDKDPVIDTIILGCTHYPLLLDKIRQFTPGHIRIIAQGEYVARSLQDYLNRHPE 238 Query: 237 -------------INTHQTRVFDDHALFLSGKPDIAMRRL 263 + T F++ A G+ DI + + Sbjct: 239 MDARCEKGGKCRFLTTESENKFEESASIFLGRQDIKVESI 278 >gi|83748331|ref|ZP_00945355.1| Glutamate racemase [Ralstonia solanacearum UW551] gi|207723937|ref|YP_002254335.1| glutamate racemase protein [Ralstonia solanacearum MolK2] gi|83724953|gb|EAP72107.1| Glutamate racemase [Ralstonia solanacearum UW551] gi|206589144|emb|CAQ36106.1| glutamate racemase protein [Ralstonia solanacearum MolK2] Length = 277 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 6/218 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + + Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCEW 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + L VIACNTA LR ++ +G P +K A A +QS ++ +L+T + Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLATES 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+ + C + L +E + + ++ Sbjct: 122 TLRSDKFARLLGNVSGDCQVLCQPGYGLVPLIERG----DTHSPAVLELLQAYLQPMLDA 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYP + ++++ + +D ++AR Sbjct: 178 GADTLVLGCTHYPFLRDAIQEIAGERLALIDTGHAVAR 215 >gi|149369705|ref|ZP_01889557.1| glutamate racemase [unidentified eubacterium SCB49] gi|149357132|gb|EDM45687.1| glutamate racemase [unidentified eubacterium SCB49] Length = 263 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 14/225 (6%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWED----HALKKRLMFLFS 69 NSI +FDSG+GG + +++ L+P + +Y+AD + PYGN H K FL Sbjct: 5 NSIGLFDSGVGGTSIWKEINALLPFENTLYLADSLNAPYGNKTRDEIIHLSIKNTEFL-- 62 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L+K ++ V+ACNTA T + LR + + +G PA+K AA T++ I IL+T Sbjct: 63 --LNKNCKMI-VVACNTATTNAINILREKY-DIPIIGIEPAMKPAALQTKTKSIGILATK 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TL +SNL H ++ + I+ + KI E+ + + Sbjct: 119 GTL----SSNLFHKTAAKFTKDISVIEIIGEGLVPLIEQGKIHTPELTELLFKYTEPMVA 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL C+HYP ++ + P + +D+ ++AR+ R +L Sbjct: 175 ASIDHLVLGCSHYPYLIPKLLTILPDNITIIDSGAAVARQTRSVL 219 >gi|261886270|ref|ZP_06010309.1| glutamate racemase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 242 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 8/206 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL +L + FIY AD+ PYG + RL L Sbjct: 3 IAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSKDEI-IRLCLNCVQFLTNL 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA + ELRS+F S+ +G PA+K G I +++TPAT+ Sbjct: 62 SVDMIVIACNTATSAAITELRSSF-SVPIIGMEPAVKLGV--NAGGDILVVATPATISGN 118 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 S+LIH + HL++ ++ E+A ++ E+ K ++ + + ++ Sbjct: 119 KLSDLIHKVNLESKTHLLA----LPKLVEFAQNMEFDSLEVLKYLKDEISKFDLSNISLL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLD 221 VL CTH+ FR + P +D Sbjct: 175 VLGCTHFNYFKDSFRAILPNKTGIID 200 >gi|300703743|ref|YP_003745345.1| glutamate racemase [Ralstonia solanacearum CFBP2957] gi|299071406|emb|CBJ42725.1| Glutamate racemase [Ralstonia solanacearum CFBP2957] Length = 277 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 6/218 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + + Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCEW 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + L VIACNTA LR ++ +G P +K A A +QS ++ +L+T + Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLATES 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+ + C + L +E + + ++ Sbjct: 122 TLRSDKFARLLGNVSGDCQVLCQPGYGLVPLIERG----DTHSPAVLELLQAHLQPMLDA 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYP + ++++ + +D ++AR Sbjct: 178 GADTLVLGCTHYPFLRDAIQEIAGERLALIDTGHAVAR 215 >gi|228476470|ref|ZP_04061160.1| glutamate racemase [Streptococcus salivarius SK126] gi|228251891|gb|EEK10937.1| glutamate racemase [Streptococcus salivarius SK126] Length = 271 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 16/246 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAEQIRQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K ++ VIACNTA ++ +E++ + LG V P A +QSG Sbjct: 53 YTWQLVKFLLTKDVKMI-VIACNTATAVVWEEIKGAL-DIPVLGVVLPGSSAAIKSSQSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I Q ++ +S A VE +I KK + Sbjct: 111 HIGVIGTPMTIASNIYEQKIKHLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ESMAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDD 247 +R +D Sbjct: 226 SREVED 231 >gi|187250694|ref|YP_001875176.1| glutamate racemase [Elusimicrobium minutum Pei191] gi|186970854|gb|ACC97839.1| Glutamate racemase [Elusimicrobium minutum Pei191] Length = 264 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/248 (22%), Positives = 124/248 (50%), Gaps = 7/248 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL +L+ ++ +P+ +FIY D PYG+ + + + + + L+ Sbjct: 6 IGIFDSGLGGLTILRALQNDLPKENFIYFGDSARVPYGSKSKSTVLQYSLEI-AKFLETQ 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRR 134 V+ACNTA + L+ S+ G + A AA T++ ++++ T T+ Sbjct: 65 NIKFLVVACNTASAFALEALKKEL-SIPVFGVIEAGAYAAVTKTKNKKVAVIGTSGTVSS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +I+++ + + +++ + +EE + + ++ + ++K G +D Sbjct: 124 GSYKKVINAFDKKVKVFEIATPLFVPFIEEGWADTRAAKLVAEEYLSA--VKKSG--SDT 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYP+I + +++ V+ +D++++I++ L + +T+ ++ S Sbjct: 180 LILGCTHYPIIKTLIKKIMGSKVNLIDSAETISKATAGFLKSKDMLKTKGSGSVKIYASD 239 Query: 255 KPDIAMRR 262 PD+ ++ Sbjct: 240 APDLFAKK 247 >gi|148262569|ref|YP_001229275.1| glutamate racemase [Geobacter uraniireducens Rf4] gi|146396069|gb|ABQ24702.1| glutamate racemase [Geobacter uraniireducens Rf4] Length = 288 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 110/215 (51%), Gaps = 7/215 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ +P+ IY+ D PYG+ + + + S ++ Sbjct: 13 KAIGIFDSGVGGLTVLKEIIKTLPQEDTIYLGDTARVPYGSKSPETVTRYSRQITSFLVQ 72 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + +L V+ACNTA + L+ FP + +G + P ++AA+ T+SG + ++ T T+ Sbjct: 73 RDIKML-VVACNTASAVSLAALKKEFP-IPIVGVIEPGARRAASVTRSGKVGVIGTAGTI 130 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + I + + + + EE ++ + ++G +++EG Sbjct: 131 KSSAYAKAIKRINPEIEVVTRACPLFVPLAEEGWVDNEVARLTAQAYLQG--VKEEG--V 186 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTHYP++ + ++ V +D+++ A Sbjct: 187 DTLVLGCTHYPILKGIIAEVMGGGVTLVDSAEETA 221 >gi|303239730|ref|ZP_07326254.1| glutamate racemase [Acetivibrio cellulolyticus CD2] gi|302592667|gb|EFL62391.1| glutamate racemase [Acetivibrio cellulolyticus CD2] Length = 260 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 12/228 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS--DILD 73 I FDSGIGG+ VL ++P +IY AD + PYG +KK ++FS D + Sbjct: 3 IGFFDSGIGGITVLYDTLKVLPNEDYIYYADTLNVPYGPKPKDEVKK---YIFSAIDFII 59 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPAT 131 K + VIACNTA ++ +ELR+ + S+ +G PAIK A + +L +T T Sbjct: 60 KQEVKAVVIACNTATSVAIEELRNKY-SIPIVGMEPAIKPAVEKDRDANKRVLVTATALT 118 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L+ NLI ++ H+V + L V +++ ++ E+ + ++ + + Sbjct: 119 LKEEKLHNLIAKLDNE---HVVDLLPLPGLV-QFSEKLEFNEEIVLPYLKEQLSKYDFNN 174 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + IVL CTH+ +FR+L+ + +D + A + +L +N+ Sbjct: 175 YETIVLGCTHFSYFKDMFRKLALSHIKVIDGNIGTANNLKRILKEMNS 222 >gi|257126623|ref|YP_003164737.1| glutamate racemase [Leptotrichia buccalis C-1013-b] gi|257050562|gb|ACV39746.1| glutamate racemase [Leptotrichia buccalis C-1013-b] Length = 261 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 8/201 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSGIGGL VL+++R ++P Y D PYG + + + +L+K Sbjct: 2 SIGVFDSGIGGLTVLKEIRKVLPNEKIYYFGDTARVPYGEKTKELIIRYSKEIVEFLLEK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA L EL+ F + +G + A + A T++G I ++ T AT+ Sbjct: 62 DVSAI-VVACNTATALALKELKEIF-KIPIIGVIEAGARTAINTTKNGKIGVIGTKATIN 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + I + ++ + + + VEE K+ IK +++ ++ D Sbjct: 120 SEKYTEEIKLFNAEAEVFQKACPLFVPAVEEGILNGKLVNQIIK-----TYLDDFNEKID 174 Query: 194 VIVLACTHYPLIVHVFRQLSP 214 ++L CTHYPL+ ++ P Sbjct: 175 TLILGCTHYPLLKEAISKIYP 195 >gi|329907999|ref|ZP_08274775.1| Glutamate racemase [Oxalobacteraceae bacterium IMCC9480] gi|327546835|gb|EGF31763.1| Glutamate racemase [Oxalobacteraceae bacterium IMCC9480] Length = 275 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 11/220 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL+ +R +P+ +Y +D PYG + +++R + + + +L + Sbjct: 12 IGVFDSGIGGLSVLRHIRANLPQEALLYFSDAQFAPYGGRPEQQIEERALAIGA-LLVAH 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q V+ACN+A LR +P++ +G P +K AAA + S ++ +L+T ATL Sbjct: 71 QVKALVVACNSATAAAIAALRHAYPALIVVGVEPGLKPAAAVSASRIVGVLATEATLASE 130 Query: 136 YTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L + + + ++ LA R+E+ + + + + + + D Sbjct: 131 RFARLRMTLSAATGVTFLAQPCPGLALRIEQDSMHLP----DAMALLRSFVLPLLDQGAD 186 Query: 194 VIVLACTHYPL----IVHVFRQLSPWPVDWLDNSDSIARR 229 +VL CTHYP I + S V +D ++AR+ Sbjct: 187 TLVLGCTHYPFVQEQIAAIASAHSTNSVTLIDTGAAVARQ 226 >gi|308270889|emb|CBX27499.1| Glutamate racemase [uncultured Desulfobacterium sp.] Length = 266 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 5/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL V++ + +P Y IY D PYG+ + + + +L+ Sbjct: 7 IGIFDSGIGGLTVVKAVMGKIPGYDIIYFGDTARTPYGSKSSETVIQYAIEDTEFLLNNG 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA ++ D + F F PA++ A ++ I ++ T AT++ Sbjct: 67 ANII-VVACNTASSVATDSIVKKFDVPVFEVITPAVELAVESSRKMSIGVIGTRATVKSC 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 N I + + I+ V+ +L VEE I E ++ + K+ D + Sbjct: 126 VYENKIKAINAGAKIYSVACPLLVPLVEEGW----INRPETSMIVKKYLHSLKVKQIDTL 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +L CTHYPL+ H+ + V+ +D+S +A + Sbjct: 182 ILGCTHYPLLKHIICRKIGKRVNIIDSSLGVADK 215 >gi|317129840|ref|YP_004096122.1| glutamate racemase [Bacillus cellulosilyticus DSM 2522] gi|315474788|gb|ADU31391.1| glutamate racemase [Bacillus cellulosilyticus DSM 2522] Length = 279 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 32/261 (12%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V+ ++ +P+ IY+ D PYG + ++K + + Sbjct: 1 MDRPIGVIDSGVGGLTVVSELIRQLPKEEIIYIGDTARCPYGPRPESEVRKYTWEMIDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L K +L VIACNTA ++ +E + P + +G + P A T++ + ++ T Sbjct: 61 LLKDIKML-VIACNTATAVVLEEAKQQLP-IPVVGVIHPGTIAALKVTKTDHVGVIGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEKE 188 T I+S + + +++ + +VE AC + + E + E I KE Sbjct: 119 T---------INSGAYERELTMINHEV---KVESLACPNLVPLVERGLFSSDEASEIVKE 166 Query: 189 G------KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 R D ++L CTHYPL+ V R+++ V+ + + D AR LL HQ Sbjct: 167 SLAPILSTRIDSLILGCTHYPLLAPVIREIAGEKVEIICSGDETAREVSALL----YHQE 222 Query: 243 RVFDD-----HALFLSGKPDI 258 +F + HA + +G D+ Sbjct: 223 LLFKEERIPKHAFYSTGSSDM 243 >gi|171322906|ref|ZP_02911602.1| glutamate racemase [Burkholderia ambifaria MEX-5] gi|171091727|gb|EDT37266.1| glutamate racemase [Burkholderia ambifaria MEX-5] Length = 287 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 9/236 (3%) Query: 1 MKIDNYPCEKKLQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M + + P ++ + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++ Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSHHAPYGPRDEA 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + + L + VIACNTA +R S+ +G P IK AAA + Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +G+ +L+T +TL L+ Y + L +E ++ Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRA 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 +E D +VL CTHYP R L + +D SD+IAR+ AR L Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDLVGDRLTIVDTSDAIARQLARVL 230 >gi|322373870|ref|ZP_08048405.1| glutamate racemase [Streptococcus sp. C150] gi|321277242|gb|EFX54312.1| glutamate racemase [Streptococcus sp. C150] Length = 271 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 16/246 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESVVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K ++ VIACNTA ++ +E++ + LG V P A +QSG Sbjct: 53 YTWQLVRFLLTKNVKMI-VIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSQSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ SN+ + + + + R +IK KK + Sbjct: 111 KIGVIGTPMTI----ASNIYEQKIKRLAPQMAVLSLPCPRFAPIVESNEIKSSVAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ESMAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDD 247 +R +D Sbjct: 226 SREVED 231 >gi|332877978|ref|ZP_08445709.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684082|gb|EGJ56948.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 272 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 23/231 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL---FSDIL 72 I +FDSG+GG + +++ LMP + +++AD+ PYG K+ ++ L + L Sbjct: 11 IGLFDSGVGGTTIWKEINALMPNENTLFLADNKNAPYG----EKTKEEIIALCDANTQFL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNT T LR + + F+G PAIK A + + I +L+T Sbjct: 67 LNHNAKIIVVACNTGTTNAIAYLRDKYKQVPFIGIEPAIKPAGLQSITKKIGVLAT---- 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK----- 187 RRT TS+L + H+ + + +V E + I+ +++ ++K Sbjct: 123 RRTLTSDLFAK--TSEHLKQEEKIEIIEQVGEGLVDL-IEAGQMESAKMTALLQKYLQPM 179 Query: 188 --EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 EG D +VL CTHYP ++ ++ P + +D+ ++AR+ R +L + Sbjct: 180 VAEG--IDYLVLGCTHYPYLLPQIQRFIPVSIKVIDSGYAVARQTRNILAQ 228 >gi|299066438|emb|CBJ37623.1| Glutamate racemase [Ralstonia solanacearum CMR15] Length = 277 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 6/218 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + + Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAGRTLRVCEW 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + L VIACNTA LR ++ +G P +K A A ++S ++ +L+T + Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLREQL-AVPVIGVEPGLKPAVATSRSRVVGVLATES 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+ + C + L +E + + + + Sbjct: 122 TLRSDKFARLLGTVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLRAYLLPMLEA 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYP + R+++ + +D ++AR Sbjct: 178 GADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVAR 215 >gi|310642114|ref|YP_003946872.1| glutamate racemase 2 [Paenibacillus polymyxa SC2] gi|309247064|gb|ADO56631.1| Glutamate racemase 2 [Paenibacillus polymyxa SC2] Length = 262 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 8/226 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL ++P ++Y AD + PYG+ +KK ++ + + + Sbjct: 3 IGFFDSGIGGITVLHDTLKVLPNEDYMYYADTLNVPYGHKTKDEVKKYVLNAI-EFISQQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133 + VIACNTA + +E+R + S+ +G PA+K A ++ + + +T TLR Sbjct: 62 KVKAIVIACNTATSAAIEEIRGKY-SIPIIGMEPAVKPAVKSKKNIDKRVLVTATALTLR 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NLI ++ H+V + L V ++A + E + ++ + + + Sbjct: 121 EERLQNLITKLDNE---HVVDLLPLPKLV-QFAESFEFNEQIVLPYLQEQLSIYDLSKYE 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 IVL CTH+ +FR+L V+ +D ++ A+ + +L +N+ Sbjct: 177 TIVLGCTHFSYYKDIFRKLFSSDVNIIDGNNGTAKNLKKVLEEMNS 222 >gi|197116675|ref|YP_002137102.1| glutamate racemase [Geobacter bemidjiensis Bem] gi|197086035|gb|ACH37306.1| glutamate racemase [Geobacter bemidjiensis Bem] Length = 278 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 9/216 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L Sbjct: 4 KAIGIFDSGVGGLTVLKEVVRALPQEDTIYLGDTARVPYGTKSPETVVRYSRQITRYLLS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + VL V+ACNTA + L+ F S+ +G + P + AAA T+SG + ++ T AT+ Sbjct: 64 RDIKVL-VVACNTASAVALSALQQEF-SIPIVGVIEPGARAAAAVTKSGKVGVIGTTATV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR- 191 + + I + + + + EE ++E+ + G ++E K Sbjct: 122 ASSAYTKAIKRINPEIEVVSRACPLFVPLAEEGWV-----DNEVARLTAGIYLEDLKKHG 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTHYP++ V ++ V +D ++ A Sbjct: 177 VDTLVLGCTHYPILRKVIAEVMGPEVTLVDAAEQTA 212 >gi|110639009|ref|YP_679218.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406] gi|110281690|gb|ABG59876.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406] Length = 269 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 11/245 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I IFDSGIGGL V + L+P IY D FPYG+ A++ + + +L Sbjct: 5 QRPIGIFDSGIGGLTVAYAVNQLLPNESIIYFGDTAHFPYGDKSTAAIQSYAVKITDMLL 64 Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 ++ V+ +IACN+ A+ L+K+ S + + P ++ A G + ++ T Sbjct: 65 QQHCKVI-LIACNSASSAAYQLVKEYAGSRAKVINVID--PIVRYVGAKYPKGKVGLIGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ I + + +++ +LA +EE I E I ++ +K Sbjct: 122 KKTVSSNVYQRKIDKLNKEITLKALATPLLAPMIEEGYFNNAISESIILNYLQ----DKS 177 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 + ++L CTHYPLI L VD +D+SD +A + L N T H Sbjct: 178 LDGIESLILGCTHYPLIKEQINNLYKGSVDVIDSSDIVAAAVKDYLADTNLLNTDADVQH 237 Query: 249 ALFLS 253 ++S Sbjct: 238 KFYVS 242 >gi|172061157|ref|YP_001808809.1| glutamate racemase [Burkholderia ambifaria MC40-6] gi|171993674|gb|ACB64593.1| glutamate racemase [Burkholderia ambifaria MC40-6] Length = 287 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 9/236 (3%) Query: 1 MKIDNYPCEKKLQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M + + P ++ + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++ Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSQHAPYGPRDEA 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + + L + VIACNTA +R S+ +G P IK AAA + Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +G+ +L+T +TL L+ Y + L +E ++ Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRT 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 +E D +VL CTHYP R + + +D SD+IAR+ AR L Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLTIVDTSDAIARQLARVL 230 >gi|29653649|ref|NP_819341.1| glutamate racemase [Coxiella burnetii RSA 493] gi|161830181|ref|YP_001596247.1| glutamate racemase [Coxiella burnetii RSA 331] gi|29540911|gb|AAO89855.1| glutamate racemase [Coxiella burnetii RSA 493] gi|161762048|gb|ABX77690.1| glutamate racemase [Coxiella burnetii RSA 331] Length = 280 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 10/227 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++ +P +IY+ D PYG + R + IL Sbjct: 7 IGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETV-SRYATQMASILIAQ 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA T +L+ F + +G V P + A T++ +++L+T T++ Sbjct: 66 NIKLLVVACNTASTAALPQLQQQFSHIPIIGVVEPGARAAVVATKNNKVALLATETTIQS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EG-KR 191 N + + Q I + + + EE C DEI + ++E G + Sbjct: 126 GIYQNTLRALSPQIEITTQTCGLFVALAEE-GC----TNDEIALLVAKKYLEPIINGYHQ 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D ++L CTH+P+++ + ++ ++++ + A + +L + N Sbjct: 181 CDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNN 227 >gi|17546675|ref|NP_520077.1| glutamate racemase [Ralstonia solanacearum GMI1000] gi|20177976|sp|Q8XY07|MURI_RALSO RecName: Full=Glutamate racemase gi|17428974|emb|CAD15658.1| probable glutamate racemase protein [Ralstonia solanacearum GMI1000] Length = 277 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 6/218 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + + Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAGRTLRVCEW 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + L VIACNTA LR ++ +G P +K A A ++S ++ +L+T + Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLREQL-AVPVIGVEPGLKPAVATSRSRVVGVLATES 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+ + C + L +E + + + + Sbjct: 122 TLRSDKFARLLGNVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLRAYLLPMLEA 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYP + R+++ + +D ++AR Sbjct: 178 GADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVAR 215 >gi|317131748|ref|YP_004091062.1| glutamate racemase [Ethanoligenens harbinense YUAN-3] gi|315469727|gb|ADU26331.1| glutamate racemase [Ethanoligenens harbinense YUAN-3] Length = 271 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 23/234 (9%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSG+GGL V++ + +P IY D PYG + + K Sbjct: 1 MDNRP--------IGVFDSGLGGLTVIRALERTLPHEDLIYFGDTGRVPYGTKGNDTIVK 52 Query: 63 RLMFLFSDILDKYQPVLSV----IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 +S+ + ++ V IACNT ++ +E+ + F PA++ A T Sbjct: 53 -----YSEQIVRFLRGFDVKAILIACNTVSSVAFEEVCAQAGVPVFGVVEPAVEAAVRTT 107 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEI 176 + G I +L T AT+R IH Y+ + + + VE +A G ++ E Sbjct: 108 RGGEILVLGTSATVRSGAYEQAIHRYLPDAGVRSRACPLFVPLVENGHFAAGDQLAELAA 167 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + ++ FI G+ D ++L CTHYP++ + ++ V+ +D+ +A RA Sbjct: 168 HEYLD-SFI---GQGVDTVILGCTHYPILRSLIAKIMGGQVELVDSGCEMAVRA 217 >gi|326202256|ref|ZP_08192125.1| glutamate racemase [Clostridium papyrosolvens DSM 2782] gi|325987374|gb|EGD48201.1| glutamate racemase [Clostridium papyrosolvens DSM 2782] Length = 258 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 26/231 (11%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I DSG GG+ VL + +P+ ++IY AD PYG +++ +F + L Sbjct: 4 DKIGFLDSGFGGITVLSEALRQLPQENYIYYADIEHVPYGTKTKEEVRE-YVFRAVEFLV 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K V+ACNTA ++ ELR + LG PA+K A + +L+T TLR Sbjct: 63 KQGIKALVVACNTATSIAVRELRGMY-DFPILGMEPAVKPAVRNGNGKRVLVLATALTLR 121 Query: 134 RTYTSNLIHSYVSQCH----------IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 NL+ V Q H + + +MI +Y + + IK ++EG Sbjct: 122 EEKFHNLVQR-VDQEHVVDYLPFPELVEMAENMIF-----DYDSIVPV----IKSKLEGF 171 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +E VL CTH+P+ F+++ P VD +D S+ R + LL Sbjct: 172 NLEN----YKTFVLGCTHFPIYRDAFKKVLPSFVDIIDGSEGTIRYLKRLL 218 >gi|312862544|ref|ZP_07722786.1| glutamate racemase [Streptococcus vestibularis F0396] gi|322517484|ref|ZP_08070357.1| glutamate racemase [Streptococcus vestibularis ATCC 49124] gi|311101949|gb|EFQ60150.1| glutamate racemase [Streptococcus vestibularis F0396] gi|322123966|gb|EFX95525.1| glutamate racemase [Streptococcus vestibularis ATCC 49124] Length = 271 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 16/246 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K ++ VIACNTA ++ +E++ + LG V P A +QSG Sbjct: 53 YTWQLVKFLLTKDVKMI-VIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSQSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I Q ++ +S A VE + + +I E Sbjct: 111 QIGVIGTPMTIASNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAK-KIVYESM 169 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++K D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 170 APLVDK----VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDD 247 +R +D Sbjct: 226 SREVED 231 >gi|241663373|ref|YP_002981733.1| glutamate racemase [Ralstonia pickettii 12D] gi|240865400|gb|ACS63061.1| glutamate racemase [Ralstonia pickettii 12D] Length = 280 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 6/218 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + Q + +FDSG+GGL VL+ + +P +Y+AD PYG + +R + + Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAISAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCEW 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+T + Sbjct: 64 LVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLATES 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+ + C + L +E + + ++ Sbjct: 122 TLRSEKFARLLAAASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLQAYLQPMLDA 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYP + R+++ + +D ++AR Sbjct: 178 HADTLVLGCTHYPFLEDAIREIAGDRLTLIDTGHAVAR 215 >gi|255692422|ref|ZP_05416097.1| glutamate racemase [Bacteroides finegoldii DSM 17565] gi|260621890|gb|EEX44761.1| glutamate racemase [Bacteroides finegoldii DSM 17565] Length = 280 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + S + D Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVSKLFD-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L + P+ LG + P ++ TQ+ I IL+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPNIDPARRVLGVIRPTVECIGNITQNQHIGILATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ IH + V+ + S VE + + I+K I+ + Sbjct: 131 GTVKSESYPLEIHKLFPDIRVSGVACPMWVSLVENNESQNEGTDYFIRKYIDQLLTKD-- 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + D ++L CTH+P+++ RQ P + + + +A+ + L R Sbjct: 189 PQIDTVILGCTHFPILLPKIRQYIPEHISVISQGEYVAQSLKDYLRR 235 >gi|150389186|ref|YP_001319235.1| glutamate racemase [Alkaliphilus metalliredigens QYMF] gi|149949048|gb|ABR47576.1| glutamate racemase [Alkaliphilus metalliredigens QYMF] Length = 279 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 6/223 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL + +PE ++Y D PYG +KK L F + L Sbjct: 10 IGVFDSGVGGISVLADLISQLPEESYVYYGDSGNAPYGIKSKDEVKK-LSFDVVEFLLAQ 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + DELR++ + +G PA+K A SG + +++TP TLR Sbjct: 69 GIKALVVACNTATSAAIDELRASL-DIPVIGMEPALKPALELHPSGRVIVMATPVTLREK 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + LI + + + L +E + ++ +E F + D I Sbjct: 128 KFNTLIDRFNDCGEVIKLPCPGLVEIIEREGA----RGPALETYLEKLFSPFNMEEIDAI 183 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 VL CTHY + ++ +D + A+ R LL N Sbjct: 184 VLGCTHYVFVRESIAEMIGNHAALIDGNGGTAKHVRRLLQEEN 226 >gi|293115464|ref|ZP_05791593.2| glutamate racemase [Butyrivibrio crossotus DSM 2876] gi|292809801|gb|EFF69006.1| glutamate racemase [Butyrivibrio crossotus DSM 2876] Length = 280 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 7/213 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GG+ VL ++ LMP +FIY D PYG + + L +D+L Sbjct: 29 VFDSGVGGISVLSELVKLMPYENFIYFGDSANAPYGTKPLDKVAE-LTIHTADMLIAKGC 87 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 VIACNTA +R+ +P++ +G PA+K AA I +L+T TL ++ Sbjct: 88 KCLVIACNTATVAAVSRIRNMYPAIPVIGIEPALKPAALDNPGKRILVLATHITLNQSKF 147 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 NL+ Y I + + + VE+ G+ E ++ E D +VL Sbjct: 148 LNLMTRYKDLADIFTLEAPGIVEAVEK---GLT-DSQEFMDYLKNLLHEYIDNPVDAVVL 203 Query: 198 ACTHYPLIV-HVFRQLSPWPVDWLDNSDSIARR 229 CTHYP + + L P + D + AR Sbjct: 204 GCTHYPFVKRQILEALQYTPAVY-DGGNGTARE 235 >gi|315225613|ref|ZP_07867422.1| glutamate racemase [Capnocytophaga ochracea F0287] gi|314944430|gb|EFS96470.1| glutamate racemase [Capnocytophaga ochracea F0287] Length = 269 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 111/224 (49%), Gaps = 9/224 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL---FSDIL 72 I +FDSG+GG + +++ LMP + +++AD+ PYG K+ ++ L + L Sbjct: 11 IGLFDSGVGGTTIWKEVNALMPNENTLFIADNKNAPYG----EKTKEEIIALCDANTRFL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL Sbjct: 67 LENNAKIIVVACNTGTTNAISYLRNKYKEVPFIGIEPAIKPASLQSVTKKIGVLATRSTL 126 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + ++ + V+ G +IK E+ + + + Sbjct: 127 ASDLFAKTSEHLKQEEQVEIIEQ-VGEGLVDLIEAG-RIKSPEMTLLLRKYLLPMVAEGI 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 D +VL CTHYP ++ ++L P + +D+ ++A++ R +L + Sbjct: 185 DYLVLGCTHYPYLLPQIQELIPPHIKVIDSGYAVAKQTRNILSQ 228 >gi|116070411|ref|ZP_01467680.1| Glutamate racemase [Synechococcus sp. BL107] gi|116065816|gb|EAU71573.1| Glutamate racemase [Synechococcus sp. BL107] Length = 262 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 31/251 (12%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSGIGGL VL+++ IY+ D PYG+ ++ + + + D+ Q Sbjct: 8 FDSGIGGLTVLRQVLERHGPVQCIYLGDTARVPYGSRSAPEIRLIAAEVVAWLRDQ-QVS 66 Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNT L +D E ++ P + +GA AAA Q+ + +L+TPAT+ Sbjct: 67 TVVMACNTTNALARDVAEGQAGGPVIGLIGA------AAAMVQTSRVGVLATPATV---- 116 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCFIEKE 188 S+ + + ++ + V E AC + DE+++ + Sbjct: 117 --------ASEAYRFSIEALHPGTLVVEQACPEFVPLIESGDLSSDELRRTAKEYLHPLL 168 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFD 246 + IVL CTHYPL+ V RQL P V +D + +AR+ +L P+++ + D Sbjct: 169 EASVESIVLGCTHYPLLEPVLRQLLPDSVQLIDPAVGVARQLDSVLGAPKLSVGEGLHLD 228 Query: 247 DHALFLSGKPD 257 D ++ PD Sbjct: 229 DCRFCVTADPD 239 >gi|220931107|ref|YP_002508015.1| glutamate racemase [Halothermothrix orenii H 168] gi|254766117|sp|B8D151|MURI_HALOH RecName: Full=Glutamate racemase gi|219992417|gb|ACL69020.1| glutamate racemase [Halothermothrix orenii H 168] Length = 253 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 6/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG+ VL++ L+P +IY AD PYG + + +++ + ++++ Sbjct: 3 IGIFDSGVGGITVLKEALNLLPGEDYIYYADTANVPYGTKDKNEVRQYIFKAVEFLINRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA ++ +LR T+ +G PA+K A +++ + +L+TP T+R Sbjct: 63 IEAL-VVACNTATSIAIKDLRETY-QFPIVGMEPAVKPAVERSRNKKVLVLATPLTIREE 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NL+ ++ +V S+ L V EYA G E+ I ++ + + Sbjct: 121 KFRNLVSRVKAE---DIVDSLGLPGLV-EYAEGFVFDENIIIPYLKDRLSPFNLQEYGTL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+ +F ++ P +D +D + R + LL Sbjct: 177 VLGCTHFLYFRDIFNKIIPDHIDIIDGNKGTVRHLKNLL 215 >gi|86157092|ref|YP_463877.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773603|gb|ABC80440.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-C] Length = 259 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 14/247 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V + + +P +Y+ D PYG + + + +L Sbjct: 2 SRIGIFDSGVGGLTVQRAILAALPSADTVYLGDTARVPYGTKSAETVTQ-YSLRNARVLA 60 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + + L V+ACNTA + LR+ S+ LG V P + AA +++G I ++ T T+ Sbjct: 61 RREIDLLVVACNTASAVALPALRAEL-SVPVLGVVDPGARVAAKASRTGRIGVIGTQGTV 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191 I + + + EE G +DE+ + I +++ G Sbjct: 120 ASGAYQEAIRRERPGAEVVARACPLFVPLAEE---GWTDPDDEVVRGIVRRYLDPLRGAA 176 Query: 192 TDVIVLACTHYPLI-VHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRVFD 246 D +VL CTHYPL+ + R+L V +D++++IA R +P R H+ V D Sbjct: 177 IDTLVLGCTHYPLLRAAIARELP--EVRLVDSAEAIAEEVRARIPAAPGRTGVHRFLVTD 234 Query: 247 DHALFLS 253 FL+ Sbjct: 235 VPERFLA 241 >gi|166030602|ref|ZP_02233431.1| hypothetical protein DORFOR_00268 [Dorea formicigenerans ATCC 27755] gi|166029604|gb|EDR48361.1| hypothetical protein DORFOR_00268 [Dorea formicigenerans ATCC 27755] Length = 272 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 8/216 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL VL + ++PE F+Y AD+ PYG ++ + + + ++ K Sbjct: 2 KIGIFDSGMGGLSVLHRALRMIPEADFLYYADEEHVPYGEKTREQVRGYIDEIIAFMIKK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132 Q VIACNTA ++ E RS FP + +G PA+K+A + G I + +TP T+ Sbjct: 62 -QVDAIVIACNTATSVATKEYRSQFP-LPIVGMEPAVKKAVEEYADRPGRILVAATPITI 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + +H V + + ++ ++ +A +D++ ++ + + Sbjct: 120 Q----GDKLHHLVDRVDKRDMVDLVALPKLVRFAEQEIFDQDQVVPYLKEALKDYPLEEY 175 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 VL CTH+ ++++ P ++++D ++ R Sbjct: 176 KAFVLGCTHFNYFKESYQEIFPNKIEFVDGNEGALR 211 >gi|269122263|ref|YP_003310440.1| glutamate racemase [Sebaldella termitidis ATCC 33386] gi|268616141|gb|ACZ10509.1| glutamate racemase [Sebaldella termitidis ATCC 33386] Length = 258 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 9/230 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI IFDSG+GGL VL+++R + P Y D PYG + + + +L K Sbjct: 2 SIGIFDSGLGGLTVLKEVRKIFPNEEIFYFGDTARVPYGEKTKELIIRYSKEITDFLLTK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133 VL V+ACNTA L +EL++ + + +G + A ++ A + T++ I ++ T AT+ Sbjct: 62 NINVL-VVACNTATALALEELKAVY-DIPVIGVIEAGVRSALSVTKTNEIGVIGTKATIN 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 IH ++ + + VEE +I E IK + G F +K D Sbjct: 120 SEKYKQEIHRRNKDIVVYQKACPLFVHVVEEGLLDGEIIESIIKHYL-GDFDDK----VD 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 ++L CTHYPL+ +++ P ++ +D + A + +L N + + Sbjct: 175 TLILGCTHYPLLKKEIQKIYP-DLNLIDPAMETALDLKKVLTENNAAENK 223 >gi|196250191|ref|ZP_03148885.1| glutamate racemase [Geobacillus sp. G11MC16] gi|196210375|gb|EDY05140.1| glutamate racemase [Geobacillus sp. G11MC16] Length = 264 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 1 MERAIGVIDSGVGGLTVAKEIIRQLPKERIIYLGDTARCPYGPRPIEEIRQ-FTWQMIHY 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + VIACNTA ++ DE+R+ + LG V P + A T++G I ++ T Sbjct: 60 LQQYPLKMLVIACNTATAVVLDEVRAKL-DIPVLGVVHPGARAALKATKNGHIGVIGTVG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R + S + H+ ++ VE + ++ + + Sbjct: 119 TVRSKAYEKALQSINPRVHVESLACPKFVPLVESG----DFEGEKALAIVAESLAPLRPR 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 DV++L CTHYPL+ + R+ V + + D AR +L + T + +H Sbjct: 175 PIDVLILGCTHYPLLAPLIREYMGKKVKLICSGDETAREVSAILHHSHLLYTGGCEPEHL 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G ++ + + FG Sbjct: 235 FFTTGSKELFEKISRKWFG 253 >gi|224543164|ref|ZP_03683703.1| hypothetical protein CATMIT_02364 [Catenibacterium mitsuokai DSM 15897] gi|224523951|gb|EEF93056.1| hypothetical protein CATMIT_02364 [Catenibacterium mitsuokai DSM 15897] Length = 264 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 5/195 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I +FDSG+GG+ VLQ + +MP + + D + PYG +++ + + Sbjct: 11 KKEEYIGVFDSGVGGVSVLQAIHEMMPGENLYFFGDSLNAPYGEKTLEDVQQLTLNAIEN 70 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + K VIACNTA + LR + + +G PA+K AA ++ I +++T Sbjct: 71 MNKKKHLKAIVIACNTATSAAVTLLREKYTDIPVIGIEPALKPAALSKKNSCILVMATAN 130 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR L Y I V LA R+E+ + E ++ + + +GK Sbjct: 131 TLRLDKFHQLAERYDKSATIIPVPCYGLAKRIEQG----NLDEPDLIELLTDLIGPYKGK 186 Query: 191 RTDVIVLACTHYPLI 205 D +VL CTHYP + Sbjct: 187 -VDSVVLGCTHYPFV 200 >gi|256820188|ref|YP_003141467.1| glutamate racemase [Capnocytophaga ochracea DSM 7271] gi|256581771|gb|ACU92906.1| glutamate racemase [Capnocytophaga ochracea DSM 7271] Length = 269 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 111/224 (49%), Gaps = 9/224 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL---FSDIL 72 I +FDSG+GG + +++ LMP + +++AD+ PYG K+ ++ L + L Sbjct: 11 IGLFDSGVGGTTIWKEVNALMPNENTLFIADNKNAPYG----EKTKEEIIALCDANTRFL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL Sbjct: 67 LENNAKIIVVACNTGTTNAISYLRNKYKEVPFIGIEPAIKPASLQSVTKKIGVLATRSTL 126 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + ++ + V+ G +IK E+ + + + Sbjct: 127 ASDLFAKTSEHLKQEEQVEIIEQ-VGEGLVDLIEAG-RIKSPEMTLLLRKYLLPMIAEGI 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 D +VL CTHYP ++ ++L P + +D+ ++A++ R +L + Sbjct: 185 DYLVLGCTHYPYLLPQIQELIPPHIKVIDSGYAVAKQTRNILSQ 228 >gi|315652855|ref|ZP_07905828.1| glutamate racemase [Eubacterium saburreum DSM 3986] gi|315484886|gb|EFU75295.1| glutamate racemase [Eubacterium saburreum DSM 3986] Length = 269 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 15/228 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V +++ MP +Y D PYG+ + K + + + K Sbjct: 8 IGVFDSGVGGLTVAREIISQMPNEGIVYFGDTARVPYGSKSKDTVIKYSRQIVNFLQTKN 67 Query: 76 QPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + VIACNTA ++K E+ + GA+ A K T+ G I ++ T T Sbjct: 68 VKAI-VIACNTASAFALDILKTEINIPIIGVIHAGAITATKT----TKVGRIGVVGTNGT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEGK 190 + IH S+ + + +L VEE + D + EI ++ E + + Sbjct: 123 ISSGIYEKTIHEINSELEVIQKACPLLVPLVEE-----GLINDSVTDEIISRYVSELKSR 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTHYPL+ + FR++ V ++ + A+ + LL R N Sbjct: 178 HIDSLVLGCTHYPLLYNTFRRIMGEGVSLVNPAYETAKELKSLLIREN 225 >gi|187917978|ref|YP_001883541.1| glutamate racemase [Borrelia hermsii DAH] gi|119860826|gb|AAX16621.1| glutamate racemase [Borrelia hermsii DAH] Length = 254 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 18/228 (7%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 L++ I+IFDSGIGGL + + +++Y+AD+ FPYG L K ++ L Sbjct: 3 NLEDVIVIFDSGIGGLSYFEYISKRFVNRNYVYIADNKNFPYGEKSPEFLLKEILELVLK 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + Y VIACNTA + D+L FP + L +V +++ A + +++T + Sbjct: 63 LEQMYNIASIVIACNTASISVYDKLNLRFPIIYTLPSVGLVEELAC----KRVILIATSS 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLV--SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + +CH +L+ S+ L + VE G + KED ++ + +E E Sbjct: 119 TINSEFVQR-----EKKCHWNLILKSASELVNFVEY---GDRFKEDALRY-LRALQLEVE 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLP 235 R D++ L CTHY I + PV +N + +A A+ L P Sbjct: 170 ANRRDMVFLGCTHYLHIKDMIESFLGIPV--YENRELVANELAKVLGP 215 >gi|325125275|gb|ADY84605.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 261 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72 I +FDSG GGL VL ++ L+P +++ D PYG E + L KR++ +++ Sbjct: 10 IGVFDSGQGGLTVLSRLVDLIPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVV---DELI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + V + L +E+ + I + +E GK Sbjct: 126 EQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYVGKAA 181 Query: 193 DVIVLACTHYPLIVHVFRQL 212 V VL CTH+P +++ Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200 >gi|117926510|ref|YP_867127.1| glutamate racemase [Magnetococcus sp. MC-1] gi|117610266|gb|ABK45721.1| glutamate racemase [Magnetococcus sp. MC-1] Length = 272 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 22/221 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ + P+ FIY+ D PYG + +R +D L ++ Sbjct: 11 IGIFDSGVGGLTVLRTLARRFPQESFIYLGDTARVPYGTKSPRTV-ERYTLQVADHLQRH 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLISILSTPATLRR 134 V ACNTA L LR+ P + G VP + A TQ+G + ++ T AT Sbjct: 70 GVKGVVAACNTASALGLGALRAHQPKLPVQGVIVPGCRSALNVTQTGRVGVIGTRAT--- 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEKE---- 188 I S + ++L++ I V + AC + + E+ I +E Sbjct: 127 ------ISSGAYRTTLNLLNPTI---EVSDIACPLFVPLAEEGWTHHAATEMIVRETLTP 177 Query: 189 --GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D ++L CTHYP++ V +++ V +D+++++A Sbjct: 178 LLDSDIDTLILGCTHYPVLKEVIQKVMGEGVMLVDSAEAVA 218 >gi|313680798|ref|YP_004058537.1| glutamate racemase [Oceanithermus profundus DSM 14977] gi|313153513|gb|ADR37364.1| glutamate racemase [Oceanithermus profundus DSM 14977] Length = 260 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 21/261 (8%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ I +FDSG+GGL VL+ +R +P F+Y D PYG+ + L +R + S Sbjct: 9 LEQPIGVFDSGVGGLTVLEALRRALPGRDFLYFGDTARVPYGS-KPPELVRRFAWEISGF 67 Query: 72 LDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L + V V+ACNTA ++ + D R P + PA+ +A Y G+I +T A Sbjct: 68 LLRQGAVALVVACNTASSVALADLARLGVPVTGVID--PAVAEAERYGHVGVIGTRATVA 125 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + Y S L + +++ + VEE + D + + + ++E Sbjct: 126 S--GAYQSRL---EARGKRVWSLATPLFVPIVEE-----GLWSDGVAELVARHYLEGAPD 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 + ++L CTHYP + + +L P + +D+++ AR LP RV Sbjct: 176 DLEALILGCTHYPYLKPLLERLRPG-LTLIDSAEPTARAVARSLP-AGPGSGRVVH---- 229 Query: 251 FLSGKPDIAMRRLMQGFGLKS 271 +++G P+ A R L G+ + Sbjct: 230 YVTGDPE-AYRALAARLGVPA 249 >gi|300811367|ref|ZP_07091863.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497602|gb|EFK32628.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 261 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72 I +FDSG GGL VL ++ LMP +++ D PYG E + L KR++ +++ Sbjct: 10 IGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVV---DELI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++T TL Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATSLTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + V + L +E+ + I + +E GK Sbjct: 126 EQDKFNQLVAECAEPGQVAKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYAGKAA 181 Query: 193 DVIVLACTHYPLIVHVFRQL 212 V VL CTH+P +++ Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200 >gi|309782392|ref|ZP_07677116.1| glutamate racemase [Ralstonia sp. 5_7_47FAA] gi|308918729|gb|EFP64402.1| glutamate racemase [Ralstonia sp. 5_7_47FAA] Length = 282 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 6/218 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + + Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAERTLRVCEW 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+T + Sbjct: 64 LVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLATES 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+ C + L +E + + + Sbjct: 122 TLRSEKFARLLAGASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLRAYLQPMLDA 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYP + +++ + +D ++AR Sbjct: 178 NADTLVLGCTHYPFLEDAIHEIAGDRLTLIDTGHAVAR 215 >gi|302380932|ref|ZP_07269394.1| glutamate racemase [Finegoldia magna ACS-171-V-Col3] gi|302311310|gb|EFK93329.1| glutamate racemase [Finegoldia magna ACS-171-V-Col3] Length = 261 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 19/226 (8%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++K N I DSG+GGL V +K++ LMP +IY AD PYG+ +++++ + Sbjct: 4 KQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGS----KTREQMIKIS 59 Query: 69 SDIL---DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLIS 124 +I+ ++ Q L V+ACNT ++ +RS + +G V +K A T + + Sbjct: 60 ENIVRFFNEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQTTSNKKVG 118 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMIL--ASRVEEYACGIKIKEDEIKKEIEG 182 ++ST AT+ + L + Q I + S L VEE C K ++I K++E Sbjct: 119 VISTKATV----DNGLYKKLLEQNDIGVCQSACLDFVGFVEE-DCKDK---EKILKKVEE 170 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D I+L CTHYP+++ ++ + + ++D +DS++ Sbjct: 171 YLKPIVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSE 216 >gi|55822242|ref|YP_140683.1| glutamate racemase [Streptococcus thermophilus CNRZ1066] gi|116627188|ref|YP_819807.1| glutamate racemase [Streptococcus thermophilus LMD-9] gi|81559855|sp|Q5M1I5|MURI_STRT1 RecName: Full=Glutamate racemase gi|122268209|sp|Q03MG1|MURI_STRTD RecName: Full=Glutamate racemase gi|55738227|gb|AAV61868.1| glutamate racemase [Streptococcus thermophilus CNRZ1066] gi|116100465|gb|ABJ65611.1| glutamate racemase [Streptococcus thermophilus LMD-9] Length = 271 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 16/248 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K ++ VIACNTA ++ +E++ + + LG V P A ++SG Sbjct: 53 YTWQLVKFLLTKDVKMI-VIACNTATAVVWEEIKESL-DIPVLGVVLPGSSAAIKSSRSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I Q ++ +S A VE + + + + + Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMA 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----DRVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDDHA 249 +R D Sbjct: 226 SREVKDKT 233 >gi|227540150|ref|ZP_03970199.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC 33300] gi|227240011|gb|EEI90026.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC 33300] Length = 275 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 27/239 (11%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WED-HALKKRLMFL 67 L NS I +FDSG GGL V ++++ +PEY +IY+ D+ PYGN +E + K +F Sbjct: 6 LHNSPIGVFDSGYGGLSVFKEIKKELPEYDYIYLGDNARIPYGNRSFETVYQFTKECVFK 65 Query: 68 FSDILDKYQPVLSVIACNTAF--TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124 D+ L ++ACNTA L + P LG + P + YT + I Sbjct: 66 LFDLGCD----LVILACNTASAKALRSIQQHDLPPGKKVLGVIRPTTEIIKEYTTTNKIG 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 IL+T T++ I+ + + + VE +EI E F Sbjct: 122 ILATTGTVKSESYKIEINKFYPEIEVFQHDCPFWVPLVE---------NNEIDTEGARYF 172 Query: 185 IEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 +EK + D IVLACTHYPL++ V +Q P + + +A + L R Sbjct: 173 VEKDIHELLSQSSDIDTIVLACTHYPLLLPVIKQFVPPHIQIISQGPIVAHSLKNYLER 231 >gi|296136513|ref|YP_003643755.1| glutamate racemase [Thiomonas intermedia K12] gi|295796635|gb|ADG31425.1| glutamate racemase [Thiomonas intermedia K12] Length = 263 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 8/216 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P+ IYVAD PYG+ D L++R + ++ + Sbjct: 7 IGVFDSGVGGLTVLRALRAQLPQASLIYVADSAHAPYGDRPDDFLQQRARQITRFLIGQG 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA LR+ F + F+G P IK A A + + + +L+TP+TLR Sbjct: 67 A-RLIVVACNTATAAAIAALRAEF-DLPFVGIEPGIKPALARSDARRVGVLATPSTLRSA 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+H++ + L LA VE ++ ++++ I D + Sbjct: 125 KFRALLHTHAAAAEPVLQPCPGLADAVERG----DLQAPQVQQLIRQFCAPLRTAGCDTV 180 Query: 196 VLACTHYPLIVHVFR-QLSPWPVDWLDNSDSIARRA 230 VL CTHYPL+ + +L P V LD ++ +AR+A Sbjct: 181 VLGCTHYPLLAEQIQAELGPQ-VHLLDTAEPVARQA 215 >gi|205374388|ref|ZP_03227186.1| glutamate racemase [Bacillus coahuilensis m4-4] Length = 264 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 25/233 (10%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I I DSG+GGL V++++ +P YV D PYG ++ + ++ Sbjct: 1 MNKPIGIIDSGVGGLTVVKEVMRQLPNERIYYVGDTARCPYGPRHTDEVRT-FTWELTNY 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + +IACNTA ++ DE++ S+ +G + P + A +T+SG I +L T Sbjct: 60 LLQYDIKMLIIACNTATAVVLDEIKHKL-SIPVIGVIDPGARAAIKHTKSGRIGVLGTNV 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + S VE E G F EK K Sbjct: 119 TVKSKAYDRALRTINRDVQVWSKSCPKFVPLVE-------------SGEYTGSFAEKIVK 165 Query: 191 RT---------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 T D I+L CTHYPL+ + + + V + + D AR A +L Sbjct: 166 NTLQSMKQHPLDTIILGCTHYPLLEPIIQDVMGSNVKVISSGDETAREASAIL 218 >gi|169350167|ref|ZP_02867105.1| hypothetical protein CLOSPI_00911 [Clostridium spiroforme DSM 1552] gi|169292950|gb|EDS75083.1| hypothetical protein CLOSPI_00911 [Clostridium spiroforme DSM 1552] Length = 261 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 112/227 (49%), Gaps = 12/227 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I +FDSG+GGL VL ++ L+P + IY+ D+ PYG+ L K + Sbjct: 1 MERAIGVFDSGVGGLTVLNSIKSLLPNENIIYIGDNYHCPYGDKTPAQLFKYASGIVEYF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + K L V+ACNT + + + L+ T+P + +G + A + I++T AT Sbjct: 61 I-KQNVKLIVLACNTTSSTVLERLQMTYPEVMIIGVIDATVNDFINRKVANTLIIATVAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ I S+ +++ L VE +Y GI +I ++++ Sbjct: 120 IKSNKYPETIKQIDSKIETFSLATPKLVPLVESGKYKEGI--------YDILHEYLDEYK 171 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 +R I+L CTHYP++ + P ++++ +S++I++ + +L R Sbjct: 172 ERIQSIILGCTHYPILKEQIENVLP-NIEYVSSSEAISKSVKDILLR 217 >gi|298207461|ref|YP_003715640.1| Glutamate racemase [Croceibacter atlanticus HTCC2559] gi|83850097|gb|EAP87965.1| Glutamate racemase [Croceibacter atlanticus HTCC2559] Length = 263 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 8/229 (3%) Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 +QN+ I IFDSG+GG + +++ L+P IY+AD PYG + + L + Sbjct: 1 MQNNAPIGIFDSGVGGTSIWREIHQLLPLEQTIYLADSKYAPYGEKTKDEIVE-LSIKNT 59 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + L + ++ACNTA T LR+ + ++ + PAIK AA T++ + IL+T Sbjct: 60 EKLISLGAKVIIVACNTATTNAIKHLRANY-TLPIIAIEPAIKPAALNTKTKAVGILATQ 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TL + Y I V L +E K E+++ ++ Sbjct: 119 GTLNSELFTQTSELYARDIDIIEVFGKGLVPEIEAGRQDGK----EVERLLKLYLKPMLD 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 K D +VL C+HYP ++ ++L P V +D+ ++AR+ + +L N Sbjct: 175 KNIDYLVLGCSHYPYLIPKLKELLPKTVTIIDSGLAVARQTKAVLEHYN 223 >gi|251796096|ref|YP_003010827.1| glutamate racemase [Paenibacillus sp. JDR-2] gi|247543722|gb|ACT00741.1| glutamate racemase [Paenibacillus sp. JDR-2] Length = 271 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 8/249 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q I I DSG+GGL V +++ +P +Y D PYG D + R D Sbjct: 3 VQQPIAILDSGVGGLTVAREVMRQLPREKIVYFGDTARAPYGP-RDPKIVTRFTREIVDY 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +++P + VIACNTA +E+R+ + +G + P + A T +G I ++ T Sbjct: 62 LIQFRPKMIVIACNTATAFALEEIRAIV-DIPVVGVIKPGARAALGRTITGCIGVIGTEG 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + H+ + + VE+ + + + I Sbjct: 121 TIKSGAYEHALLEISPDVHVISEACPLFVPLVEKG----NFRSLQTYETIRSSIGHLRKF 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249 D ++L CTHYP + V +++ ++ + ++D AR +L + + H Sbjct: 177 PMDSLILGCTHYPFLADVIQEVVGPDINLISSADETAREVSDILQDQGMLSRGEILPVHQ 236 Query: 250 LFLSGKPDI 258 F SG+P + Sbjct: 237 FFCSGEPQM 245 >gi|149183306|ref|ZP_01861747.1| glutamate racemase [Bacillus sp. SG-1] gi|148848999|gb|EDL63208.1| glutamate racemase [Bacillus sp. SG-1] Length = 266 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 7/224 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I I DSG+GGL V +++ +P Y+ D PYG +KK + + Sbjct: 1 MDQPIGIIDSGVGGLTVAKEVMRQLPNETIFYLGDTARCPYGPRTAEEVKK-FTWEMAAF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L Y + VIACNTA ++ +EL+ P + +G + P + A ++Q+G I +L T Sbjct: 60 LMNYNIKMLVIACNTATAVVLEELQDMLP-IPVVGVIQPGARAALKHSQNGRIGVLGTVG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ IHS + ++ VE K D + + + + Sbjct: 119 TVNSKAYDKAIHSINDSIDVTSLACPKFVPLVESGEYESKWAVDIVNE----TLVHMREE 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYPL+ + + + V +++ D AR +L Sbjct: 175 PIDTLILGCTHYPLLQPIVQTVMGQEVKVINSGDETAREVSAIL 218 >gi|187929182|ref|YP_001899669.1| glutamate racemase [Ralstonia pickettii 12J] gi|229486249|sp|B2U6V5|MURI_RALPJ RecName: Full=Glutamate racemase gi|187726072|gb|ACD27237.1| glutamate racemase [Ralstonia pickettii 12J] Length = 282 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 6/218 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + + Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEYIADRTLRVCEW 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+T + Sbjct: 64 LVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLATES 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+ C + L +E + + + Sbjct: 122 TLRSEKFARLLAGASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLRAYLQPMLDA 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYP + +++ + +D ++AR Sbjct: 178 NADTLVLGCTHYPFLEDAIHEIAGDRLTLIDTGHAVAR 215 >gi|115352286|ref|YP_774125.1| glutamate racemase [Burkholderia ambifaria AMMD] gi|115282274|gb|ABI87791.1| glutamate racemase [Burkholderia ambifaria AMMD] Length = 287 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 7/221 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + + L Sbjct: 16 GPVGLFDSGLGGLSVLRAVRAHLPGESFVYVADSQHAPYGPRDEAFITERTLAI-GEWLA 74 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + VIACNTA +R S+ +G P IK AAA + +G+ +L+T +TL Sbjct: 75 REGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSTTGVAGVLATQSTLN 133 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L+ Y + L +E ++ +E D Sbjct: 134 SPRFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRTLLERYLQPMLDDGAD 189 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 +VL CTHYP R + + +D SD+IAR+ AR L Sbjct: 190 TLVLGCTHYPFFTETIRDIVGDRLTIVDTSDAIARQLARVL 230 >gi|213961790|ref|ZP_03390056.1| glutamate racemase [Capnocytophaga sputigena Capno] gi|213955579|gb|EEB66895.1| glutamate racemase [Capnocytophaga sputigena Capno] Length = 271 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 9/222 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL---FSDIL 72 I +FDSG+GG + +++ LMP +++AD+ PYG K+ ++ L + L Sbjct: 11 IGLFDSGVGGTTIWKEINALMPNESTLFLADNKNAPYG----EKTKEEIITLCDANTQFL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL Sbjct: 67 LAQKAKIIVVACNTGTTNAISYLRNKYKDVPFIGIEPAIKPASLQSVTKKIGVLATRSTL 126 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + ++ + V+ G +I+ E+ + + + Sbjct: 127 ASDLFAKTSEHLKQEEQVEIIEQ-VGEGLVDLIEAG-RIESPEMTQLLRHHLLPMVALGI 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYP ++ +QL P + +D+ ++A++ R +L Sbjct: 185 DYLVLGCTHYPYLLPQIQQLIPARIKVIDSGYAVAKQTRNIL 226 >gi|294340641|emb|CAZ89033.1| putative Glutamate racemase [Thiomonas sp. 3As] Length = 263 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 111/214 (51%), Gaps = 8/214 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+ +R +P+ IYVAD PYG+ D L++R + ++ + Sbjct: 9 VFDSGVGGLTVLRALRAQLPQVSLIYVADSAHAPYGDRPDDFLQQRARQITRFLIGQGA- 67 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA LR+ F + F+G P IK A A + + + +L+TP+TLR Sbjct: 68 RLIVVACNTATAAAITALRAEF-DLPFVGIEPGIKPALARSDARRVGVLATPSTLRSAKF 126 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L+H++ + L LA VE ++ ++++ I D +VL Sbjct: 127 RALLHTHAAAAEPVLQPCPGLADAVERG----DLQAPQVQQLIRQFCAPLRTAGCDTVVL 182 Query: 198 ACTHYPLIVHVFR-QLSPWPVDWLDNSDSIARRA 230 CTHYPL+ + +L P V LD ++ +AR+A Sbjct: 183 GCTHYPLLAEQIQAELGPQ-VHLLDTAEPVARQA 215 >gi|170703387|ref|ZP_02894167.1| glutamate racemase [Burkholderia ambifaria IOP40-10] gi|170131707|gb|EDT00255.1| glutamate racemase [Burkholderia ambifaria IOP40-10] Length = 287 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 9/236 (3%) Query: 1 MKIDNYPCEKKLQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M + + P ++ + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++ Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSHHAPYGPRDEA 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + + L + VIACNTA +R S+ +G P IK AAA + Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +G+ +L+T +TL L+ Y + L +E ++ Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRT 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 +E D +VL CTHYP R + + +D SD+IAR+ AR L Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLMIVDTSDAIARQLARVL 230 >gi|78188551|ref|YP_378889.1| glutamate racemase [Chlorobium chlorochromatii CaD3] gi|78170750|gb|ABB27846.1| glutamate racemase [Chlorobium chlorochromatii CaD3] Length = 267 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 6/223 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +N I IFDSGIGGL V++ ++ +P IY D PYG ++K S IL Sbjct: 4 ENPIGIFDSGIGGLTVVKAIQAALPSERIIYFGDTARVPYGPKSQVTIRKYAAD-DSAIL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 +YQP L ++ACNT L D + S+ LG + A A +++G I ++ T AT Sbjct: 63 MRYQPKLIIVACNTVSALALDVVEKCCGSVPVLGVLKAGASLAVQASRNGRIGVIGTQAT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + I+ + + + EE G I+ D E Sbjct: 123 VCSNAYACAINQQAPDYEVTSKACPLFVPLAEE---GF-IEHDATALIAEHYLAPLRTHN 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYP++ +V + + +D+++++A +A +L Sbjct: 179 IDTLVLGCTHYPILRNVIERTIGSNIRIIDSAEAVALQAGEML 221 >gi|303326014|ref|ZP_07356457.1| glutamate racemase [Desulfovibrio sp. 3_1_syn3] gi|302863930|gb|EFL86861.1| glutamate racemase [Desulfovibrio sp. 3_1_syn3] Length = 276 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 6/235 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL VL+ + +P +Y+ D PYG + + + ++D+ Sbjct: 9 VALFDSGVGGLTVLKALADRLPGEDLLYLGDTARLPYGTKGRETITRYTLLAARKLVDRG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 +L V+ACNTA LR F + +G V P + AA +++G I +++T AT+ Sbjct: 69 AKML-VVACNTATAAALPALREHFAPLPVVGVVEPGARAAARTSRNGEIVVIATEATITG 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTD 193 I + H+ + + EE + E ++ +E F R D Sbjct: 128 GAYQQAITRIRPEAHVRGRACTLFVPMAEEGWMDGPLVEGIARRYLEDMFTPAVTAPRPD 187 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 ++L CTH+PL+ + + V +D++ + A L R++ +T D+H Sbjct: 188 TLLLGCTHFPLLQAALQNVVGPQVRIVDSAATTAESVEEELTRLDLLRT---DEH 239 >gi|251794653|ref|YP_003009384.1| glutamate racemase [Paenibacillus sp. JDR-2] gi|247542279|gb|ACS99297.1| glutamate racemase [Paenibacillus sp. JDR-2] Length = 258 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 8/231 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I IFDSG+GGL VL + +P ++IY+AD PYG + ++ ++ ++ + Sbjct: 2 TIGIFDSGLGGLTVLAEALKRLPAENYIYMADTKHVPYGTKSEEEVRDFVLQTVEQMVAE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132 L V+ACNTA ++ +ELR + S +G PA+K A ++ +L +TP TL Sbjct: 62 GIDAL-VVACNTATSIAINELRERY-SFPIIGMEPAVKPAVEMNRATGKKVLVWATPLTL 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ S V + I V S+ + V +Y ++ +D +K + Sbjct: 120 RMPKYYALV-SRVDEEGI--VDSLPMPELV-QYCEALQFDKDVLKDYFLAKLAPYDLNEY 175 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 ++VL CTH+P + R + P + ++ + RR +L R R Sbjct: 176 GILVLGCTHFPFYTSILRNVLPPHIQIVNGNLGTIRRLTAMLSRYGIGTGR 226 >gi|312277667|gb|ADQ62324.1| Glutamate racemase [Streptococcus thermophilus ND03] Length = 271 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 16/248 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K ++ VIACNTA ++ +E++ + LG V P A ++SG Sbjct: 53 YTWQLVKFLLTKDVKMI-VIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSRSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I Q ++ +S A VE + + + + + Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMA 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----DRVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDDHA 249 +R D Sbjct: 226 SREVKDKT 233 >gi|55820352|ref|YP_138794.1| glutamate racemase [Streptococcus thermophilus LMG 18311] gi|81561031|sp|Q5M627|MURI_STRT2 RecName: Full=Glutamate racemase gi|55736337|gb|AAV59979.1| glutamate racemase [Streptococcus thermophilus LMG 18311] Length = 271 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 16/248 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPYESIVYIGDSARAPYGPRPAGQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K ++ VIACNTA ++ +E++ + + LG V P A ++SG Sbjct: 53 YTWQLVKFLLTKDVKMI-VIACNTATAVVWEEIKESL-DIPVLGVVLPGSSAAIKSSRSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I Q ++ +S A VE + + + + + Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMA 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----DRVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDDHA 249 +R D Sbjct: 226 SREVKDKT 233 >gi|144900285|emb|CAM77149.1| Asp/Glu racemase [Magnetospirillum gryphiswaldense MSR-1] Length = 284 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 16/226 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE-----DHALKKRLMFLFSD 70 I +FDSG+GGL V + +P +Y+ D PYG + L+ F D Sbjct: 21 IGVFDSGVGGLTVAAALHRRLPAETLLYLGDVARLPYGTKAPQTIIQYVLRAAAFFRSHD 80 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129 I + V+ACNTA L FP + LG + A +QAAA + G I + +T Sbjct: 81 I------KMLVLACNTASAHAAAALAQHFPDLLVLGVIDAGAEQAAAQSPGGRIVVAATE 134 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T R I + I V + + VEE I E I++ + F + +G Sbjct: 135 GTCRSGAFDRAIAVHRPTAAITPVPCPLFVALVEEGLTEGPIAEAMIRQYLAEHF-QGDG 193 Query: 190 KRTDVIVLACTHYPLIVHVFRQ-LSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+PL+ R+ L P PV +D + ++A RA +L Sbjct: 194 A-ADCLVLGCTHFPLLAPSLRKVLGPIPV-LVDCAQAVAERAALML 237 >gi|169824250|ref|YP_001691861.1| glutamate racemase [Finegoldia magna ATCC 29328] gi|167831055|dbj|BAG07971.1| glutamate racemase [Finegoldia magna ATCC 29328] Length = 261 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 19/226 (8%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++K N I DSG+GGL V +K++ LMP +IY AD PYG+ +++++ + Sbjct: 4 KQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGS----KTREQMIKIS 59 Query: 69 SDIL---DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLIS 124 +I+ ++ Q L V+ACNT ++ +RS + +G V +K A T + + Sbjct: 60 ENIVRFFNEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQTTSNKKVG 118 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMIL--ASRVEEYACGIKIKEDEIKKEIEG 182 +++T AT+ + L + Q I + S L VEE C K ++I K++E Sbjct: 119 VIATKATV----DNGLYKKLLEQNDIEVCQSACLDFVGFVEE-DCKDK---EKILKKVEE 170 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D I+L CTHYP+++ ++ + + ++D +DS++ Sbjct: 171 YLKPIVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSE 216 >gi|258544909|ref|ZP_05705143.1| glutamate racemase [Cardiobacterium hominis ATCC 15826] gi|258519829|gb|EEV88688.1| glutamate racemase [Cardiobacterium hominis ATCC 15826] Length = 272 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 7/207 (3%) Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + LQN I +FDSG+GGL V++ + +P H IY D PYG ++ + Sbjct: 5 ETLQNRPIGVFDSGVGGLTVVRALMERLPLEHLIYYGDTARVPYGVKSRATIETYSAQIV 64 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILS 127 +L + L VIACNT + D +R+ + L + A QAA T Q+ I++++ Sbjct: 65 EYLLAQRVKAL-VIACNTIAAVAGDSIRAQARGLPVLDVITAGAQAALQTSQNHHIAVIA 123 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + IH++ Q + + +L VEE + +++ ++ + Sbjct: 124 TNTTVNSNAYARAIHAHDPQARVQSQACPLLVPLVEEGWLEHDVTRLTVREYLKPILADD 183 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSP 214 D +VL CTHYPL+ + R+ +P Sbjct: 184 ----ADTLVLGCTHYPLLKPLLREEAP 206 >gi|184200646|ref|YP_001854853.1| glutamate racemase [Kocuria rhizophila DC2201] gi|183580876|dbj|BAG29347.1| glutamate racemase [Kocuria rhizophila DC2201] Length = 297 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 13/250 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL V + + +P +YV D PYG ++ + + D++ Sbjct: 14 NSPIGVFDSGVGGLTVARSIIDQLPNEEILYVGDTANGPYGPLPIAQVRSNALRIMDDLV 73 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILST 128 D +L VIACNTA + + R + S+ + PA+++A A T+SG + ++ T Sbjct: 74 DSGVKLL-VIACNTASAAVLRDARERYTRGYSIPVTEVIQPAVRRAVATTRSGRVGVIGT 132 Query: 129 PATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT+ R Y N + Q I V+ VE G+ + + E K Sbjct: 133 EATIGSRAY--NDTFAAAPQLEITSVACPAFVEYVER---GVTSGPELLSTAQEYLQPLK 187 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFD 246 + + D +VL CTHYPL+ V + V+ + +++ AR R LL + Sbjct: 188 DAQ-VDTLVLGCTHYPLLTAVISYVMGESVNLVSSAEETARDVYRSLLDNGLERDPSLAP 246 Query: 247 DHALFLSGKP 256 H +G P Sbjct: 247 HHEFLATGDP 256 >gi|331701298|ref|YP_004398257.1| glutamate racemase [Lactobacillus buchneri NRRL B-30929] gi|329128641|gb|AEB73194.1| Glutamate racemase [Lactobacillus buchneri NRRL B-30929] Length = 264 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 15/233 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+++ ++P +I++ D PYG ++K Sbjct: 1 MDNRP--------IGVMDSGVGGLTVLKEITKILPNESYIFIGDQANLPYGQKSSETVRK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +D L + + VIACNTA + L+ P + +G + P + A ++SG Sbjct: 53 -LTKRIADYLVEQNIKMFVIACNTATAAAYEYLKKILP-IPVIGVIEPGAQMAVEASKSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T T+R LI + + + VEE G + + + Sbjct: 111 EIGVIATNGTVRSGDYQRLIKQANRSAVVSSLGCPEFVTMVEEGLAGTVEAQVAVNNRL- 169 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 F++K D +V+ CTH+P++ + + + V +D + A++ + L Sbjct: 170 AWFMDKP---IDTLVMGCTHFPILKNEIQNVMGNAVTLIDPGVATAQQVKAKL 219 >gi|225849254|ref|YP_002729418.1| glutamate racemase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644018|gb|ACN99068.1| glutamate racemase [Sulfurihydrogenibium azorense Az-Fu1] Length = 260 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 7/230 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI IFDSGIGGL V +++ P+ Y+ D PYGN + + + + + Sbjct: 2 SIGIFDSGIGGLTVFKEVAENFPKADIYYLGDTARVPYGNKSKETIIRYSIECATYLYHN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + L +IACNTA + + L+ P + +G V P + A YT++ + ++ T AT++ Sbjct: 62 FNVDLLIIACNTASSYAIETLKKILP-IPIIGVVKPGAEAAIRYTKNKKVGVIGTVATVK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 N + + + I+ + VEE ++ +K+ ++ IE K D Sbjct: 121 SQSYVNELKNLDNSLEIYQKPCPLFVPLVEEGWIDNEVARLTVKEYLQE-LIE---KGID 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 ++L CTHYPL+ + + L P ++ +D+S +I + L N + R Sbjct: 177 TLILGCTHYPLLKNTIKSLYPH-LNIVDSSIAIVDHIKNLNLTFNGNGVR 225 >gi|218291114|ref|ZP_03495129.1| glutamate racemase [Alicyclobacillus acidocaldarius LAA1] gi|218238925|gb|EED06133.1| glutamate racemase [Alicyclobacillus acidocaldarius LAA1] Length = 281 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 15/254 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL V M+ +P +Y D PYG+ + + +R L Sbjct: 5 HRPIGVFDSGIGGLTVFHAMKRRLPHESMVYFGDRARCPYGDRDPQEV-ERFALEIGRYL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + L V+ACNTA + L+ + +G + P QA +++G I ++ T T Sbjct: 64 ECLGIKLLVVACNTATAVALPRLKEEL-GIEVVGVIEPGASQAIEASETGRIGVIGTSVT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + ++ + + + V+ + VE+ ++ D ++ + +R Sbjct: 123 VSSHAYADALRALRPDVSVIEVACPLFVPLVEQG----HVEGDAVEAVVHESLQPLLQER 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPRINTHQTRVFDDH-- 248 D +VL CTHYPL++ V R++ + + ++D+ A+R AR L R DDH Sbjct: 179 IDTLVLGCTHYPLLMPVIRRVLGPAIRVISSADATAQRVARLLAER----GLEAPDDHVP 234 Query: 249 -ALFLSGKPDIAMR 261 A FL+ ++R Sbjct: 235 DACFLTTGDTTSLR 248 >gi|332800387|ref|YP_004461886.1| glutamate racemase [Tepidanaerobacter sp. Re1] gi|332698122|gb|AEE92579.1| Glutamate racemase [Tepidanaerobacter sp. Re1] Length = 269 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 18/249 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK----RLMFLFSDI 71 I +FDSGIGGL V ++ L+P+ + +Y D PYG + + L FL Sbjct: 8 IGVFDSGIGGLTVAGEIMKLLPKENIVYFGDTARVPYGPKSSEVVTQFAFEGLRFLLGKD 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + L VIACNT D+L ++ P + +G + P + A A T++ ++ ++ T Sbjct: 68 VK-----LIVIACNTVSATCLDKLCASSP-VPVIGVIEPGARAAVAATENQVVGVIGTER 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ IH+ Q IH + + VEE E+E ++E K Sbjct: 122 TIKSCAYERAIHALNKQIKIHSKACPLFVPLVEEGWL-----ENEAAFYTAKTYLESLKK 176 Query: 191 R-TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDH 248 + D +VLACTHYPL+ ++ V +D++ AR R L+ + Q + Sbjct: 177 QGIDTLVLACTHYPLLKLTLGKVMGETVRLVDSAWETAREVQRILIDKNLKRQDNSPAFY 236 Query: 249 ALFLSGKPD 257 F+S P+ Sbjct: 237 QYFVSDNPE 245 >gi|119356253|ref|YP_910897.1| glutamate racemase [Chlorobium phaeobacteroides DSM 266] gi|166231032|sp|A1BDJ6|MURI_CHLPD RecName: Full=Glutamate racemase gi|119353602|gb|ABL64473.1| glutamate racemase [Chlorobium phaeobacteroides DSM 266] Length = 272 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 16/228 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD-- 70 ++ I IFDSG+GGL V++ ++ MP IY D PYG ++K + D Sbjct: 9 ESPIGIFDSGVGGLTVVRAIQAEMPAERIIYFGDTARVPYGTKSPATIRK---YAHEDTA 65 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTP 129 IL + P + ++ACNT L D + T S+ +G + A A T++ + ++ T Sbjct: 66 ILMSHLPKIIIVACNTVSALALDVVEKTAGSIPVIGVLKAGADLAVQVTRNKHVGVIGTQ 125 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT+ ++ I + +I +VS + EE E + I ++ Sbjct: 126 ATVSSNAYADAI--TLLDANIEVVSKACPLFVPLAEE-----GFTEHAATRLIASDYLAA 178 Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +G D +VL CTHYP++ HV + + +D+++++A R R LL Sbjct: 179 FDGHDIDTLVLGCTHYPILRHVITETLHRDIRIIDSAEAVAGRTRKLL 226 >gi|82702343|ref|YP_411909.1| glutamate racemase [Nitrosospira multiformis ATCC 25196] gi|82410408|gb|ABB74517.1| glutamate racemase [Nitrosospira multiformis ATCC 25196] Length = 268 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 14/220 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VLQ ++ P+ ++Y+ D PYG +++ L IL Y Sbjct: 9 IAVFDSGIGGLTVLQALKKRYPQESYVYLGDTARLPYGTKSPEIVQRYSQSL-CRILLNY 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 P VIACNTA T + +R+ + +G + PA A T++ I +++T T+R Sbjct: 68 NPSAIVIACNTASTHALEAVRALAAPLPVIGMIEPAAAAAIQATKNQHIGVIATFGTIR- 126 Query: 135 TYTSNLIHSYVSQCHIHLVSS-----MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 S + + + + H+ +S M++A E ++ G I +++ ++ F E Sbjct: 127 ---SGVYEKELKKINPHIKASSQACQMLVALAEEGWSSG-PIATAIVRQYLDPIFDTAEA 182 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D ++L CTH+P+ +FR + V +++ ++ A + Sbjct: 183 P--DTLILGCTHFPVFEALFRDILGSSVTLINSGEAAATQ 220 >gi|118579835|ref|YP_901085.1| glutamate racemase [Pelobacter propionicus DSM 2379] gi|118502545|gb|ABK99027.1| glutamate racemase [Pelobacter propionicus DSM 2379] Length = 272 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 11/225 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI IFDSG+GGL VL+++ MP+ IY D PYG + R + L + Sbjct: 5 SIGIFDSGVGGLTVLREIIKAMPQEDTIYFGDTARVPYGTKSPETV-IRYAHEITSFLVR 63 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 L V+ACNT + + L+ FP + +G + P K+A ++SG I ++ T T++ Sbjct: 64 RDIKLLVVACNTVSAVALNGLKRHFP-IPVVGVIEPGAKRAVEVSRSGRIGVIGTAGTIK 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEGKR 191 + S I +Q + + + EE ++++ + +++ KE Sbjct: 123 SSAYSRAIKRLNAQAEVLTRACPLFVPLAEEGWI-----DNQVARLTAQSYLQDLKEAG- 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 D +VL CTHYPL+ + + V +D+++ AR +L R Sbjct: 177 VDTLVLGCTHYPLLKPLICETMGPDVTLVDSAEETARSVAEILSR 221 >gi|294500374|ref|YP_003564074.1| glutamate racemase [Bacillus megaterium QM B1551] gi|294350311|gb|ADE70640.1| glutamate racemase [Bacillus megaterium QM B1551] Length = 266 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 16/225 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL + P+ F+Y AD PYG + K + DIL + Sbjct: 3 IGFFDSGIGGISVLNEAIKHFPKEDFLYYADTRNVPYGTRTKEEVNKHVQTAVEDILKQE 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133 L VIACNTA ++ +ELRST+ + +G PA K A + S + + +T TL+ Sbjct: 63 VKAL-VIACNTATSISINELRSTY-DIPIIGMEPAAKPAIELSSSMDKRVLVFATDLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI----KKEIEGCFIEKEG 189 LI +V + L V E+ + D++ + ++EG + + G Sbjct: 121 ELKYKKLITRIDKDS---IVDPLPLPELV-EFCEDLNFNWDKLSTYFRTKLEGFDLNQYG 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+P V + L P + +D S R LL Sbjct: 177 ----TVVLGCTHFPYYKPVLKDLLPSHIQLIDGSKGTVERLSSLL 217 >gi|229543635|ref|ZP_04432695.1| glutamate racemase [Bacillus coagulans 36D1] gi|229328055|gb|EEN93730.1| glutamate racemase [Bacillus coagulans 36D1] Length = 269 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 110/254 (43%), Gaps = 18/254 (7%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V ++M +P YV D PYG +KK + + Sbjct: 1 MNAPIGVIDSGVGGLTVAKEMMRQLPNETIYYVGDTARCPYGPRPVEEVKKFTWQMIRFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +DK Q + VIACNTA +I DE+R + LG + P + A +T++ I +L T Sbjct: 61 MDK-QIKMLVIACNTATAVILDEVREEL-KIPVLGVIYPGARAALKHTKNFRIGVLGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIK-EDEIKKEIEGCFIEK 187 T++ + S + I ++ VE +Y I K E I+ C I Sbjct: 119 TIKSQAYERALKSINKKVKITALACPKFVPLVESGQYNSPIAKKIVAETLYPIQNCGI-- 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 D ++L CTHYPL+ + + + V + + + AR LL N TR Sbjct: 177 -----DTVILGCTHYPLLGPIIKNVMGAGVSVISSGEETAREVSTLLYFHDLFNMEDTR- 230 Query: 245 FDDHALFLSGKPDI 258 H + +G I Sbjct: 231 -QKHRFYTTGSSKI 243 >gi|167755834|ref|ZP_02427961.1| hypothetical protein CLORAM_01350 [Clostridium ramosum DSM 1402] gi|237734803|ref|ZP_04565284.1| glutamate racemase [Mollicutes bacterium D7] gi|167704773|gb|EDS19352.1| hypothetical protein CLORAM_01350 [Clostridium ramosum DSM 1402] gi|229382131|gb|EEO32222.1| glutamate racemase [Coprobacillus sp. D7] Length = 261 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 113/229 (49%), Gaps = 20/229 (8%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I +FDSG+GGL VL +R L+P + IY+ D+ PYG +++L S+I Sbjct: 1 MERAIGVFDSGVGGLTVLNSIRTLLPNENIIYIGDNYHCPYG----EKTREQLFSYASEI 56 Query: 72 LD---KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 ++ K L V+ACNT + +EL++ + + +G + A + +++T Sbjct: 57 VEYFIKENVKLIVLACNTTSATVLNELQAVYKEVLIIGVIDATVEDFISRGVDNTLVIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC---FI 185 AT+ + I Y + + + + L VE G+ KK+I ++ Sbjct: 117 AATINSHKYPDTIDCYQTGIEVFTLPTPKLVPLVE---AGMD------KKDIYDVLHEYL 167 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + I+L CTHYP++ + + + P ++++ +SD++ + R +L Sbjct: 168 DSYAGKIKSIILGCTHYPILENQIKDILP-DIEYISSSDAVCKNVRDVL 215 >gi|227824990|ref|ZP_03989822.1| glutamate racemase [Acidaminococcus sp. D21] gi|226905489|gb|EEH91407.1| glutamate racemase [Acidaminococcus sp. D21] Length = 274 Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 6/219 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I + DSG+GGL VL++++ LMP HFI++ D + PYGN + RL+ +D L Sbjct: 4 QQPIGVIDSGVGGLTVLRRLQELMPHEHFIFLGDTLNTPYGNRSREDI-IRLVNQMTDYL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V ACNT L ++ +R+ +G K T++G I I++T T+ Sbjct: 63 SYRNIKALVAACNTITVLGEETIRNGH-DFEVIGMAKGSKMIPRVTKTGRIGIMATDFTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 I + + + V L +E G +D IK+ + I K Sbjct: 122 STGAHKKEIQAAHPEYQVFGVGCPRLVPLIEHEQFGTAELKDAIKEYTD---ILKS-HDV 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 D ++L+CTHYP + V LD ++ A++ R Sbjct: 178 DTVMLSCTHYPFLKKEIEAAMGPAVTVLDPAEVTAKKCR 216 >gi|256829170|ref|YP_003157898.1| glutamate racemase [Desulfomicrobium baculatum DSM 4028] gi|256578346|gb|ACU89482.1| glutamate racemase [Desulfomicrobium baculatum DSM 4028] Length = 272 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 5/229 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E + I +FDSGIGGL VL+ + +P+ F+Y+ D PYG ++ R + Sbjct: 3 ESECTLPIGVFDSGIGGLTVLKALTEALPKESFLYLGDTARLPYGTKSAKSV-TRYVLQT 61 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + +L L VIACNTA + + L+ +P + +G + P + A +++G I ++ Sbjct: 62 TALLKARGIKLLVIACNTATGVSLEALQEAYPELPVIGVIRPGAEAACRSSRNGRIGVIG 121 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T +T+ I + + + EE C +I ++ + G + Sbjct: 122 TESTVNARGYEREILRIRPDAQVFAQACPLFVPLAEEGWCDGQIASLVAERYLGG-LVRD 180 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 G D +VL CTH+P++ + + V +D++ + A + +L R Sbjct: 181 TG--IDTLVLGCTHFPVLADAIQDVVGPDVTLVDSARTTAEFVQDMLER 227 >gi|124515180|gb|EAY56691.1| Glutamate racemase [Leptospirillum rubarum] Length = 314 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 9/210 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMF 66 E++ + I +FDSG+GGL VL+ P+ F Y+ D FPYG + + R Sbjct: 5 ERRPEGGIALFDSGVGGLTVLRHFWETFPDRDFAYLGDMARFPYGTKSRETILRFARENV 64 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISI 125 LF L P L V AC T + + EL FP + +G + A +AA T++G + + Sbjct: 65 LF---LRTLHPSLIVAACFTVSSQVLPELSREFPDVPIVGMLEAGARAACRLTRTGSVGV 121 Query: 126 LSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 L+T T+ + Y + + ++ + + A VEE I E +K +E F Sbjct: 122 LATEGTISSQAYPAVIGEMTAHSVRVYGQACPLFAPMVEEGVTEGPIAELVARKYLE-PF 180 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 + + D I+L CTHYP + + P Sbjct: 181 LNVY-REVDTIILGCTHYPPLRRTLEAILP 209 >gi|289163917|ref|YP_003454055.1| glutamate racemase [Legionella longbeachae NSW150] gi|288857090|emb|CBJ10905.1| putative glutamate racemase [Legionella longbeachae NSW150] Length = 273 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 8/216 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I +FDSG+GGL VL+ +R +P+ F+Y+ D PYG +K+ M + ++ Sbjct: 7 QLAIGVFDSGMGGLTVLRALREGLPQESFVYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPAT 131 ++ L VIACNTA T L+S P M L P A A T++ + +L+T T Sbjct: 67 ERRIKAL-VIACNTATTAALPYLQSMLPDMPVLGVVAPGAAAAVAATKNNHVIVLATETT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + LI + + I+ + +L + EE ++ + +K ++ E Sbjct: 126 IASNAYQQLIAQQLPRAVINTRACSVLVALAEEGMINNQVAREALKYYLDDFTHE----- 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D ++L CTH+P+ + + P V +D++ + A Sbjct: 181 -DTVLLGCTHFPVFKSLLISILPEGVSIVDSAHATA 215 >gi|325266613|ref|ZP_08133290.1| glutamate racemase [Kingella denitrificans ATCC 33394] gi|324982056|gb|EGC17691.1| glutamate racemase [Kingella denitrificans ATCC 33394] Length = 287 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 17/214 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG-----NWEDHALKKRLMFLFSD 70 I +FDSG+GGL V++ + +P + +Y D PYG ED +L+ D Sbjct: 27 IGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTIEDFSLQ------IVD 80 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTP 129 L + Q VIACNT + +++ +M L + A QAA A T++ I +++T Sbjct: 81 FLLQNQVKALVIACNTIAAVAGAKVQQMAGNMPVLSVIEAGAQAALATTRNNHIGVIATN 140 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ + IH++ I ++ +L VEE ++ +++ ++ +K Sbjct: 141 TTVNSNAYARAIHAHNPDTRILSQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLADK-- 198 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 D ++L CTHYPL+ + RQ +P ++ +D+S Sbjct: 199 --IDTLILGCTHYPLLKPLIRQEAPH-IELVDSS 229 >gi|303234940|ref|ZP_07321565.1| glutamate racemase [Finegoldia magna BVS033A4] gi|302494058|gb|EFL53839.1| glutamate racemase [Finegoldia magna BVS033A4] Length = 261 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 19/226 (8%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++K N I DSG+GGL V +K++ LMP +IY AD PYG+ +++++ + Sbjct: 4 KQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGS----KTREQMIKIS 59 Query: 69 SDIL---DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLIS 124 +I+ ++ Q L V+ACNT ++ +RS + +G V +K A T + + Sbjct: 60 ENIVRFFNEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQATYNKKVG 118 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMIL--ASRVEEYACGIKIKEDEIKKEIEG 182 +++T AT+ + L + Q I + S L VEE C K ++I K++E Sbjct: 119 VIATKATV----DNGLYKKLLEQNDIEVCQSACLDFVGFVEE-DCKDK---EKILKKVEE 170 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D I+L CTHYP+++ ++ + + ++D +DS++ Sbjct: 171 YLKPIVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSE 216 >gi|302335208|ref|YP_003800415.1| glutamate racemase [Olsenella uli DSM 7084] gi|301319048|gb|ADK67535.1| glutamate racemase [Olsenella uli DSM 7084] Length = 257 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 7/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GG+ VL+ + +P F Y D PYG + + D+ + Sbjct: 8 VGVFDSGVGGISVLRHLVDELPHEDFCYFGDSANNPYGGKTPDEILSLSRGIVDDMAARG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA ++ LR +P + +G PAI+ A + I +++T TL Sbjct: 68 AKAV-VIACNTATSVAAARLRLEYPDLPIVGVEPAIRPATRAPRHERILVMATQVTLALD 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L S I + LA R+E+ + ++ IE + + D + Sbjct: 127 KYHRLAEECGSSSQILGEPCVGLAHRIEQG----NLDAPDLHGLIE-TLVGRYRGTVDSV 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTHYP + R + V D ARR R LL Sbjct: 182 VLGCTHYPFVRAQIRDVV-GDVPLFDGGTGAARRLRSLL 219 >gi|71908727|ref|YP_286314.1| glutamate racemase [Dechloromonas aromatica RCB] gi|71848348|gb|AAZ47844.1| glutamate racemase [Dechloromonas aromatica RCB] Length = 269 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 6/222 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL VL+ +R +P+ F Y AD PYG+ + L++R L + L Sbjct: 11 NQPIAVFDSGLGGLTVLRALRDRLPQEDFFYFADTRFLPYGDRPEVFLRER-GVLIAKAL 69 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K Q +++ T E + + P +K A A T+SG+I +L+T TL Sbjct: 70 AK-QGAKALVIACNTATAAAAEAIRAAIDLPVVALEPGVKPAVALTRSGVIGVLATTRTL 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 L+ ++ + + + LA +E ++ ++ Sbjct: 129 ASERFQRLVGNHANHLRVIAQACPGLAEAIEAQGP----DSPQVAALLDAFVTPLAAADA 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 DV+VL CTHYP + + P LD + +AR+ LL Sbjct: 185 DVVVLGCTHYPWVAGAIARRMPVGTSLLDTGEPVARQLERLL 226 >gi|94265271|ref|ZP_01289030.1| Glutamate racemase [delta proteobacterium MLMS-1] gi|93454252|gb|EAT04568.1| Glutamate racemase [delta proteobacterium MLMS-1] Length = 264 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 13/216 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS----DI 71 I IFDSG+GG+ V + + +P++ IY D PYG+ + +S D Sbjct: 2 IGIFDSGVGGMTVARAIEQALPDHRLIYFGDLARTPYGSKSAETITA-----YSRQNVDF 56 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + L V+ACN+A ++ LR+++ F PA+++A + G + ++ T AT Sbjct: 57 LLQQGAKLLVVACNSAASVATAALRASYELPLFEVISPAVREAVHCSSGGRVGVIGTRAT 116 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R L+ C + + +L VEE + + E K + + + Sbjct: 117 IRSGVYEELLQRQRPACRVFAAACPLLVPLVEEG----WLDKRETKMILRRYLAPLKRHQ 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTHYPL+ + ++ V +D+S ++A Sbjct: 173 VDTLVLGCTHYPLLKEMIQRRIGRRVRVIDSSAALA 208 >gi|300771876|ref|ZP_07081747.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC 33861] gi|300761262|gb|EFK58087.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC 33861] Length = 275 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 104/237 (43%), Gaps = 26/237 (10%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WED-HALKKRLMFLFS 69 + I +FDSG GGL V ++++ +PEY +IY+ D+ PYGN +E + K +F Sbjct: 8 NSPIGVFDSGYGGLSVFKEIKKELPEYDYIYLGDNARIPYGNRSFETVYQFTKECVFKLF 67 Query: 70 DILDKYQPVLSVIACNTAF--TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 D+ L ++ACNTA L + P LG + P + YT + I IL Sbjct: 68 DLGCD----LVILACNTASAKALRSIQQHDLPPGKKVLGVIRPTTEIIKKYTITNKIGIL 123 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T++ I+ + + + VE +EI E F+E Sbjct: 124 ATTGTVKSESYKIEINKFYPEIEVFQHDCPFWVPLVE---------NNEIDTEGARYFVE 174 Query: 187 K-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 K + D IVLACTHYPL++ V +Q P + + +A + L R Sbjct: 175 KDIHELLSQSSEIDTIVLACTHYPLLLPVIKQFVPPHIQIISQGPIVAHSLKNYLER 231 >gi|325273239|ref|ZP_08139520.1| glutamate racemase [Pseudomonas sp. TJI-51] gi|324101626|gb|EGB99191.1| glutamate racemase [Pseudomonas sp. TJI-51] Length = 187 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 1/129 (0%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL VL +++ L+P +YVAD PYG +++R + ++ Sbjct: 10 VMDSGVGGLSVLAEIQRLLPNETLLYVADCGHVPYGEKSPDYIRERCRRIAGFFREQGAK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL+ Sbjct: 70 AL-VLACNTATVAAAADLRELYPNWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSAKF 128 Query: 138 SNLIHSYVS 146 + L+ + S Sbjct: 129 AALLDRFAS 137 >gi|319651762|ref|ZP_08005888.1| glutamate racemase [Bacillus sp. 2_A_57_CT2] gi|317396581|gb|EFV77293.1| glutamate racemase [Bacillus sp. 2_A_57_CT2] Length = 264 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 13/227 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I I DSG+GGL V +++ +P +Y+ D PYG +K + + Sbjct: 1 MKQPIGIIDSGVGGLTVAKEIMRQLPNEDIVYLGDTARCPYGPRPGDEVKSFTWQMTKYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L++ +L +IACNTA + +E+R ++ +G + P + A T++ I ++ T Sbjct: 61 LERNIKML-IIACNTATAVALEEIRREL-TIPVIGVIFPGARTAIKVTKNHKIGVIGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEK- 187 T+R N + + +H ++ VE EY E + K+I ++ Sbjct: 119 TVRSKAYENALIQLNRRSDVHSLACPKFVPLVESGEY-------EGSVAKKIVAETLQPI 171 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +GK D ++L CTHYPL+ + + + V+ + + + AR A +L Sbjct: 172 KGKGMDTLILGCTHYPLLEPIIKNVMGKGVNVISSGEETAREASTIL 218 >gi|322391355|ref|ZP_08064825.1| glutamate racemase [Streptococcus peroris ATCC 700780] gi|321145781|gb|EFX41172.1| glutamate racemase [Streptococcus peroris ATCC 700780] Length = 264 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++S + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKSKL-DIPVLGVILPGASAAIKASQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + +S A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPNLQVESLSCPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|288905998|ref|YP_003431220.1| glutamate racemase [Streptococcus gallolyticus UCN34] gi|306832017|ref|ZP_07465172.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288732724|emb|CBI14298.1| glutamate racemase [Streptococcus gallolyticus UCN34] gi|304425943|gb|EFM29060.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 269 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 18/255 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + ++ V ACNTA + +E++ + LG + P A T++G Sbjct: 53 YTWELVNFLLTQNVKMI-VFACNTATAVAWEEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I S Q ++ +S A VE ++ KK + Sbjct: 111 KIGVIGTPMTIKSDIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSG 254 +R DD HA + + Sbjct: 226 SRTQDDVTHAFYTTA 240 >gi|313893755|ref|ZP_07827321.1| glutamate racemase [Veillonella sp. oral taxon 158 str. F0412] gi|313441319|gb|EFR59745.1| glutamate racemase [Veillonella sp. oral taxon 158 str. F0412] Length = 267 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 8/210 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TFLACRIAEAL 64 Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +K QPV L VIACNT + DE+R S+ +G +K A + ++S I I++T AT Sbjct: 65 EK-QPVKLMVIACNTFTVVALDEVRERV-SVPVIGVSQGVKTAISESKSNTIGIMATVAT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + ++ + + LA +E+ D ++ +E + Sbjct: 123 VNSHIHKHVALEVDPEVLVWEQPCPELAGLIEQGHLDDFFVRDVCEEYVEPLL----SRE 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 DV+VL CTH+P + + +L+ + ++D Sbjct: 179 IDVVVLGCTHFPFVKPLLEELTAGRIQFVD 208 >gi|325978965|ref|YP_004288681.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178893|emb|CBZ48937.1| Glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 269 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 18/255 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + ++ V ACNTA + +E++ + LG + P A T++G Sbjct: 53 YTWELVNFLLTQNVKMI-VFACNTATAVAWEEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I S Q ++ +S A VE ++ KK + Sbjct: 111 KIGVIGTPMTIKSGIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSG 254 +R DD HA + + Sbjct: 226 SRTQDDVTHAFYTTA 240 >gi|304407349|ref|ZP_07389002.1| glutamate racemase [Paenibacillus curdlanolyticus YK9] gi|304343790|gb|EFM09631.1| glutamate racemase [Paenibacillus curdlanolyticus YK9] Length = 264 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 14/229 (6%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I FDSGIGGL VL + +P ++Y+AD + PYG +K + ++ + Sbjct: 2 TIGFFDSGIGGLSVLAESLRRLPAQDYLYMADTLHVPYGTKTKEEVKDYVFEAVERMMSR 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATL 132 L VIACNTA ++ ++LR+T+ S+ +G PA+K A ++ + +++T TL Sbjct: 62 GIDAL-VIACNTATSIAVEDLRATY-SLPIVGMEPAVKPAVEMNRATGKRVLVMATQLTL 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + L+ S V + I V S+ L V E ++ E+ + E+ +++ G Sbjct: 120 QLPKYYALV-SRVDEGGI--VDSLPLPGLVRYCESLQFDPQVMEEYFRAELAPYNLDEYG 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + VL CTHYP ++ R + P + +D + +R LL R Sbjct: 177 ----IFVLGCTHYPFYRNILRAMLPPHIQIVDGNAGTVKRLSALLNRFG 221 >gi|262341174|ref|YP_003284029.1| glutamate racemase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272511|gb|ACY40419.1| glutamate racemase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 269 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 11/186 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSGIGGL++ ++++ MP IY D PYG + + M + S + K Sbjct: 11 IFDSGIGGLLIAKEIKIQMPNEDLIYFGDTRNMPYGEKSKEFIIENSMKIASFLYKKKCK 70 Query: 78 VLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L VIACN+ + D L TF + + I + S I I++TPAT+R + Sbjct: 71 AL-VIACNSITSNALDILCKTFHRKILIFNVIDPIVKHKILLSSKRIGIIATPATIRSNF 129 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 + I Y I +S+ +LA +E+ G KIK++ I + K D ++ Sbjct: 130 YTKEIKKYYHHLDIVQISTSLLAPMIEK---GFKIKKNIINNYLNRL------KSIDTLL 180 Query: 197 LACTHY 202 LACTHY Sbjct: 181 LACTHY 186 >gi|301062755|ref|ZP_07203367.1| glutamate racemase [delta proteobacterium NaphS2] gi|300443162|gb|EFK07315.1| glutamate racemase [delta proteobacterium NaphS2] Length = 272 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 108/245 (44%), Gaps = 19/245 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG GGL +L +PEY ++Y+ D PYGN + ++ + FLFS Sbjct: 2 IGVFDSGFGGLTILGAFLKSLPEYDYLYLGDSARTPYGNKSQEVIYNYTRQAVRFLFSKG 61 Query: 72 LDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 VL ++ACNTA T + ++ L P+ LG V P + A A T+ G I + Sbjct: 62 C-----VLIILACNTASTKALRKIQQEWLPENHPNRRVLGVVIPLAESAVASTRYGRIGV 116 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 + T AT+ I I + +L VEE G +KK + Sbjct: 117 IGTQATIDSRVYEEEIRKLNPGVKIFTQACPLLVPLVEEGWVGKPESNMILKKYLS---- 172 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 + K+ D ++L CTHY + ++ L+ + IA + + L R +TR+ Sbjct: 173 RLKRKQIDTLILGCTHYSFLEKDIARIMGKNCRVLNGPEIIAAKLKDYLNRHPEIETRIP 232 Query: 246 DDHAL 250 D+ L Sbjct: 233 DNRNL 237 >gi|117928893|ref|YP_873444.1| glutamate racemase [Acidothermus cellulolyticus 11B] gi|166231023|sp|A0LVJ8|MURI_ACIC1 RecName: Full=Glutamate racemase gi|117649356|gb|ABK53458.1| glutamate racemase [Acidothermus cellulolyticus 11B] Length = 263 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 12/216 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK-RLMFLFSDILDK 74 I +FDSG+GGL V + + L+P YVAD FPYG +++ L L + D Sbjct: 6 IGVFDSGVGGLTVARAILDLLPHEPLYYVADTAHFPYGTKSIAEVRQYGLAVLDRMVADG 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + L VIACN+A + + + R + PA+++A + T++G + ++ TPAT+ Sbjct: 66 VK--LLVIACNSASSALLRDARERYDVPVVEVIQPAVRKAVSATRNGKVGVIGTPATIAS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEGKRT 192 + ++ + H+ L ++ VE GI + ++ E KE +E+ Sbjct: 124 MAYDD---AFAAAPHVDLTTAA-CPRFVEFVEAGITMSDELLECAKEYLAPIVERG---C 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYP + + V + ++D AR Sbjct: 177 DTLILGCTHYPFLAGAIALVVGDEVMLVSSADETAR 212 >gi|38174839|emb|CAD70220.1| glutamate racemase [Microcystis aeruginosa PCC 7806] gi|159027640|emb|CAO89504.1| murI [Microcystis aeruginosa PCC 7806] Length = 270 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 26/265 (9%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL- 72 + I +FDSG+GGL VL+++ +P+ +Y AD PYG K ++ +IL Sbjct: 7 SPIGVFDSGVGGLTVLRELYKQLPQESILYFADTARLPYGTRS----KGEIIEFVREILT 62 Query: 73 --DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +++ + ++ACNT+ L +E+R+ F + LG + P K A Q I ++STP Sbjct: 63 WMGEHRVKMVIMACNTSSALALEEVRAEFKDLPILGVILPGAK--TAVKQGKRIGVISTP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRV-EEYACGIKIKEDEIKKEIEGC 183 AT + I + + +I A+R+ + Y + ++ ++ Sbjct: 121 ATAKSNAYKQAIQEIDPTAQVWQIPCPEFVPLIEANRIFDPYTTQVA------REYLQPL 174 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 E D +V CTHY + V R+L P V +D + ++ R A L + Sbjct: 175 LAEN----IDTLVYGCTHYRHLSPVLRRLLPSSVRLVDPAAAVVRAAEKELELLGLKNPE 230 Query: 244 VFDDHALFLSGKPDIAMRRLMQGFG 268 +SG PD R Q G Sbjct: 231 TSLPTNFAVSGDPDTFARLSRQWLG 255 >gi|310641730|ref|YP_003946488.1| glutamate racemase 2 [Paenibacillus polymyxa SC2] gi|309246680|gb|ADO56247.1| Glutamate racemase 2 [Paenibacillus polymyxa SC2] Length = 284 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 12/239 (5%) Query: 5 NYPCEKKLQNSILI--FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 N E+K +S+ I FDSG+GG+ VL + +P +F+Y+AD + PYG + Sbjct: 7 NTIVERKKVSSLKIGFFDSGLGGITVLSEALRRLPNENFVYMADTLHVPYGTKTPQEVLG 66 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG- 121 + IL + L VIACNTA ++ ELR + +G PA+K A ++ Sbjct: 67 YVKASVQTILKEDIKAL-VIACNTATSIAVAELRKEY-KFPIIGMEPAVKPAVEMNRANG 124 Query: 122 -LISILSTPATLRRTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEIKKE 179 + +L+TP TL+++ + L VS+ H V S+ L V +Y + E+ Sbjct: 125 KRVLVLATPLTLKQSGYAAL----VSRVDDHGSVDSLPLPELV-QYCEQLNFDRTELFNY 179 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +VL CTHYP + R+L P + +D S +R + +L N Sbjct: 180 FNHKLSSFNLDIYGTVVLGCTHYPFYKEILRELLPSHIQLIDGSHGTVKRLKQVLSERN 238 >gi|197121115|ref|YP_002133066.1| glutamate racemase [Anaeromyxobacter sp. K] gi|220915816|ref|YP_002491120.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-1] gi|196170964|gb|ACG71937.1| glutamate racemase [Anaeromyxobacter sp. K] gi|219953670|gb|ACL64054.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-1] Length = 259 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 12/246 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V + + +P +Y+ D PYG + + + +L Sbjct: 2 SRIGIFDSGVGGLTVQRAILAALPSADTVYLGDTARVPYGTKSAETVTQ-YSLRNARVLA 60 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + + L V+ACNTA + LR+ P + LG V P + AA +++G I ++ T T+ Sbjct: 61 RREIDLLVVACNTASAVALPALRAELP-VPVLGVVEPGARVAAKASRTGRIGVIGTQGTV 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191 I + + + EE G +DE+ + + +++ Sbjct: 120 ASGAYQAAILRERPGAEVVARACPLFVPLAEE---GWTDPDDEVVRGVVRRYLDPLRDAA 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRVFDD 247 D +VL CTHYPL+ + P V +D++D+IA R +P R H+ V D Sbjct: 177 IDTLVLGCTHYPLLREAIARALPE-VRLVDSADAIAEEVRARIPAVAGRSGVHRFLVTDV 235 Query: 248 HALFLS 253 FL Sbjct: 236 PERFLG 241 >gi|325299201|ref|YP_004259118.1| Glutamate racemase [Bacteroides salanitronis DSM 18170] gi|324318754|gb|ADY36645.1| Glutamate racemase [Bacteroides salanitronis DSM 18170] Length = 275 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 23/241 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL +L K+R L+P+Y+++Y+ D+ PYG + + + + Sbjct: 7 IGIFDSGYGGLTILAKIRELLPQYNYLYLGDNARTPYGTRSFEVVYEFTLQAVRKLFGLG 66 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 P L ++ACNTA ++ + +L PS LG + P ++ A T + + +L+T Sbjct: 67 CP-LVILACNTASAKALRSIQQHDLPHLDPSRRVLGVIRPTVECIGALTHTRHVGLLATE 125 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-- 187 T+R IH + + V + +E +E F++K Sbjct: 126 GTVRSQSYPLEIHKLYADIRLTGVPCPMWVPLIE---------NNEFNSPGADYFVQKYL 176 Query: 188 -----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D I+L CTHYPL++ R+ +P + ++ +A + L R +T Sbjct: 177 GQLLSQDPEIDTIILGCTHYPLLLEKIRRYTPSHIRLVEQGKYVASSLKDYLARHPELRT 236 Query: 243 R 243 R Sbjct: 237 R 237 >gi|188996911|ref|YP_001931162.1| glutamate racemase [Sulfurihydrogenibium sp. YO3AOP1] gi|229486280|sp|B2V9I5|MURI_SULSY RecName: Full=Glutamate racemase gi|188931978|gb|ACD66608.1| glutamate racemase [Sulfurihydrogenibium sp. YO3AOP1] Length = 260 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 9/228 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL V +++ P+ Y+ D PYGN + + + S + Y Sbjct: 3 IGIFDSGIGGLTVFKEIAASFPKVDLYYLGDTARVPYGNKSKTTIIRYSVECASYLYHNY 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 VIACNTA + D LR P + +G V P + A +++ I ++ T AT++ Sbjct: 63 NVDAIVIACNTASSYALDTLREILP-IPVIGVVQPGAESAVKVSKNKKIGVIGTSATIKS 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + S I+ + + VEE ++ + +K+ ++ + K G D Sbjct: 122 NSYFETLKSLDKDLEIYQKACPLFVPLVEEGWIDNEVAKLTVKEYLDD--LVKTG--IDT 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 ++L CTHYPL+ + + L P ++ +D+S +I + + ++N +T Sbjct: 178 LILGCTHYPLLKNTIKGLYPH-LNIVDSSVAIVEHLKNI--KLNIEET 222 >gi|206603690|gb|EDZ40170.1| Glutamate racemase [Leptospirillum sp. Group II '5-way CG'] Length = 314 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 10/224 (4%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLM 65 E + + I +FDSG+GGL VL+ P+ F Y+ D FPYG + + R Sbjct: 4 AEPRSKGGIALFDSGVGGLTVLRHFWETFPDRDFAYLGDMARFPYGTKSRETILRFAREN 63 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLIS 124 LF L P L V AC T + + EL FP + +G + A +AA T++G + Sbjct: 64 VLF---LQTLHPSLIVAACFTVSSQVLPELSREFPDVPIVGVLEAGARAACRLTRTGSVG 120 Query: 125 ILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T+ + Y + + ++ + + A VEE I E +K +E Sbjct: 121 VLATEGTISSQAYPAVIGEMTAHAVRVYGQACPLFAPMVEEGVTEGPIAELVARKYLE-P 179 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 F+ + D I+L CTHYP + + P V ++D +A Sbjct: 180 FLSVY-REVDTIILGCTHYPPLRRTMEAILPD-VVFVDPGQELA 221 >gi|322387113|ref|ZP_08060724.1| glutamate racemase [Streptococcus infantis ATCC 700779] gi|321142100|gb|EFX37594.1| glutamate racemase [Streptococcus infantis ATCC 700779] Length = 264 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++S + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKSKL-DIPVLGVILPGASAAIKTSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 RIGVIGTPMTVQSDIYRQKIHDLDPNLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPEVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|309798855|ref|ZP_07693116.1| glutamate racemase [Streptococcus infantis SK1302] gi|308117504|gb|EFO54919.1| glutamate racemase [Streptococcus infantis SK1302] Length = 264 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKASQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVKSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|320354870|ref|YP_004196209.1| glutamate racemase [Desulfobulbus propionicus DSM 2032] gi|320123372|gb|ADW18918.1| glutamate racemase [Desulfobulbus propionicus DSM 2032] Length = 262 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 5/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG+ V + + P + +Y+ D PYG+ + A+ +D L + Sbjct: 2 IGIFDSGVGGMTVARAIEQFCPGFPLVYLGDLARTPYGS-KSPAMITEYSHRNTDFLLRQ 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACN+A + LRS + + PA+ +AA + +G I ++ T AT+ Sbjct: 61 GAKLIVIACNSAASTASSFLRSHYHQLIIDVIFPAVDRAAGESVNGRIGVIGTRATINSG 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + C ++ + +L VEE ++ E K ++ K+ D + Sbjct: 121 LYEQRLQAARPDCKVYSQACPLLVPLVEEGW----LERRETKMIVKKYLHPLRDKQIDTL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +L CTHYPL+ V +D+S +A + LL Sbjct: 177 ILGCTHYPLLKKTIAPRIGRRVHIIDSSVEVALHLKTLL 215 >gi|167039186|ref|YP_001662171.1| glutamate racemase [Thermoanaerobacter sp. X514] gi|300913219|ref|ZP_07130536.1| glutamate racemase [Thermoanaerobacter sp. X561] gi|307723767|ref|YP_003903518.1| glutamate racemase [Thermoanaerobacter sp. X513] gi|229486283|sp|B0K3R0|MURI_THEPX RecName: Full=Glutamate racemase gi|166853426|gb|ABY91835.1| glutamate racemase [Thermoanaerobacter sp. X514] gi|300889904|gb|EFK85049.1| glutamate racemase [Thermoanaerobacter sp. X561] gi|307580828|gb|ADN54227.1| glutamate racemase [Thermoanaerobacter sp. X513] Length = 264 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 32/254 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+ Sbjct: 6 IGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61 Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Q V + VIACNT +I +S + + F + AA YT + I +++T T+ Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTV 118 Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++Y N+ I Y C + L+ + S + Y K C Sbjct: 119 ESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPI-AYETASK------------C 165 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 E + K D +VL CTHYPL+ V ++ V +D + +A + L + + + Sbjct: 166 LKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQ 225 Query: 244 VFDDHALFLSGKPD 257 + F+SG D Sbjct: 226 IRGKAEFFVSGDKD 239 >gi|302390710|ref|YP_003826531.1| glutamate racemase [Thermosediminibacter oceani DSM 16646] gi|302201338|gb|ADL08908.1| glutamate racemase [Thermosediminibacter oceani DSM 16646] Length = 273 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 11/225 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSGIGGL V +++ +P + +Y D PYG+ + R F + L Sbjct: 5 ERPIGIFDSGIGGLTVAREIMNHLPGENLVYFGDTARVPYGSKSKETI-TRFAFEGVNFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K + VIACNT DEL+ P + +G + P + A T +G++ ++ T T Sbjct: 64 MKQAVKMIVIACNTVSATCLDELQQAVP-VPVVGVIEPGARAAVNATVNGVVGVIGTERT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI--KKEIEGCFIEKEG 189 + IH S I + + VEE G E + + G ++KEG Sbjct: 123 INSGAYIKAIHRLNSSIKIFSRACPMFVPLVEE---GWLDNEAAVFAARTYLGP-LKKEG 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VLACTHYPL+ R++ V +D++ AR LL Sbjct: 179 --IDTLVLACTHYPLLKPTLRKVMGDQVFLVDSAMETAREVARLL 221 >gi|20807679|ref|NP_622850.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4] gi|24418564|sp|Q8RAJ0|MURI3_THETN RecName: Full=Glutamate racemase 3 gi|20516226|gb|AAM24454.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4] Length = 271 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 16/227 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLMFLFSDIL 72 I +FDSG+GGL VL+++ ++P+ +++Y D PYG+ E A K++M + L Sbjct: 11 IGVFDSGVGGLTVLKRLMEVLPQENYVYFGDTRRVPYGDRSKEEIKAFTKQIM----NFL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K + VIACNT + + E + + F +K A T + I ++ T T Sbjct: 67 KKKNVKIFVIACNTISAVFEKEGK----EIVFNVVEAGVKSAVETTCNKRIGVIGTRRTT 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 SN I ++ V+ L +E+ G K + +K+ + C + ++ Sbjct: 123 EERIYSNKIKEINKSIEVYEVACPELVPLIEK---GF-YKTESVKRVVIECVKNLKEEKI 178 Query: 193 DVIVLACTHYPLIV-HVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTHYP+++ ++ L V +D ++ +A + + R+N Sbjct: 179 DTLVLGCTHYPIVIDYIEEALIGENVRIVDPAERLAYDVKEYITRVN 225 >gi|326790779|ref|YP_004308600.1| glutamate racemase [Clostridium lentocellum DSM 5427] gi|326541543|gb|ADZ83402.1| glutamate racemase [Clostridium lentocellum DSM 5427] Length = 253 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 14/242 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA----LKKRLMFLFSDILD 73 IFDSG+GG+ VL+ L+P+ +IY +D+ PYG + + FL S +D Sbjct: 5 IFDSGVGGITVLKTALKLLPQVDYIYYSDNNHVPYGTKTKEEVLGYVNDVVAFLISQQVD 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 VIACNTA ++ LRS +P + +G PA+K A + G + + +T TL+ Sbjct: 65 AI-----VIACNTATSIAVKTLRSRYP-VPIIGMEPAVKLAFNHHSDGKVLVTATSLTLK 118 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NL++ + V ++ L V +A E +IK + + + Sbjct: 119 EEKFKNLVNRLGEE---ERVCTLALPELV-TFAEAFMFDEAQIKAYFKEKLKDYPLEEIV 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTH+ + ++ P + D ++ R + L+ R + + S Sbjct: 175 AIVLGCTHFVYFKKILKECLPPHITVYDGNEGTIRHLKELIDSEKVMHIRKEPEVTFYYS 234 Query: 254 GK 255 GK Sbjct: 235 GK 236 >gi|308233557|ref|ZP_07664294.1| glutamate racemase [Atopobium vaginae DSM 15829] gi|328943355|ref|ZP_08240820.1| glutamate racemase [Atopobium vaginae DSM 15829] gi|327491324|gb|EGF23098.1| glutamate racemase [Atopobium vaginae DSM 15829] Length = 261 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 11/226 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GG+ VL+K+ +P F Y D PYG + + +++ Sbjct: 5 QGFIGVFDSGLGGISVLKKLVSQLPHEDFFYFGDTGHNPYGARSADDIFDLSKAIVDNMV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K + VIACNTA + +LR+ +P + +G PA+KQA I +L+TP TL Sbjct: 65 CKGAKAV-VIACNTATAVAAHKLRTMYPQLPLIGIEPALKQACDAHIYKHILVLATPVTL 123 Query: 133 R----RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 R + + I ++ LA R+E+ + ++ ++ Sbjct: 124 RMEKFHQLRDRMCACNSANVKISALACDGLAHRIEQG----NLDAPDLDNDLRTILAPYI 179 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 G D +VL CTHYP + + PV D + +A R +L Sbjct: 180 GS-VDAVVLGCTHYPFVKDRIVSILGNPV-CFDGAAGVAHHVRDVL 223 >gi|124025384|ref|YP_001014500.1| putative aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. NATL1A] gi|167017318|sp|A2C175|MURI_PROM1 RecName: Full=Glutamate racemase gi|123960452|gb|ABM75235.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. NATL1A] Length = 265 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 19/243 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGG VL+K+ L P FIY+AD PYG ++ +KK + S +Y Sbjct: 3 IGLFDSGIGGFTVLKKVIELCPNNSFIYLADTARLPYGVKTNNEIKKIAEEISSWF--RY 60 Query: 76 QPVLS-VIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Q + + ++ACNT + D +++ P +G+ AA+ Q + +L+TP+T+ Sbjct: 61 QNIDAFLVACNTTNAIALDVIKNNLDIPVFDLIGS------AASNIQESRVGVLATPSTV 114 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R +N I + + + +E I D+I G ++ Sbjct: 115 RTKAYTNAILEFKPKTFVIEQPCPAFVPMIEMD----NINSDDITDVATGYLQPLLKQKI 170 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 ++L C+HYPLI R++ P V +D +++++ + + + +TR + + F+ Sbjct: 171 HSLILGCSHYPLITSSLRKVLPSSVKLIDPAEALSFKLKFFI----DSKTRNYSKNKNFV 226 Query: 253 SGK 255 K Sbjct: 227 DLK 229 >gi|227513134|ref|ZP_03943183.1| glutamate racemase [Lactobacillus buchneri ATCC 11577] gi|227083709|gb|EEI19021.1| glutamate racemase [Lactobacillus buchneri ATCC 11577] Length = 264 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 7/211 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL VL+++ ++P +I+V D PYG ++K L +D + K Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRK-LTKRIADYMLKQNVK 59 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNT+ D L+ P + +G + P + A A T + I +++T T+ Sbjct: 60 MFVIACNTSTAASLDYLKKILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVSSGVY 118 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +I S + ++ + + VE G ++ +++ ++ F +K D +VL Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQL-AYFHDKS---IDTLVL 174 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 CTH+P++ + +D +D S A+ Sbjct: 175 GCTHFPVLEAEIKGAVNSGIDLIDPGISTAK 205 >gi|270292152|ref|ZP_06198367.1| glutamate racemase [Streptococcus sp. M143] gi|270279680|gb|EFA25522.1| glutamate racemase [Streptococcus sp. M143] Length = 264 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|257468922|ref|ZP_05633016.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|317063170|ref|ZP_07927655.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|313688846|gb|EFS25681.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] Length = 263 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 8/192 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GG VL+ M ++P + IY AD PYG L + L F D K Sbjct: 6 SIGVFDSGVGGTTVLKIMAEILPHENMIYYADSGNAPYGKKTVEEL-QSLCFNIMDFFLK 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + VIACNTA ++ + + +G + P K AA +++G I++L+TP T Sbjct: 65 NRCKAVVIACNTATAAALTAIKERY-DIPVIGVITPGSKAAANISKNGHIAVLATPFTAN 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + + ++ L + +EE G + ED + EI I + D Sbjct: 124 SNAYGEEIKKFAKKASVYQEGCSELCTMIEE---GWETFED--RGEILDGHISQFPGSAD 178 Query: 194 VIVLACTHYPLI 205 +VL CTHYP+I Sbjct: 179 TLVLGCTHYPII 190 >gi|119026186|ref|YP_910031.1| glutamate racemase [Bifidobacterium adolescentis ATCC 15703] gi|166231027|sp|A1A2L6|MURI_BIFAA RecName: Full=Glutamate racemase gi|118765770|dbj|BAF39949.1| glutamate racemase [Bifidobacterium adolescentis ATCC 15703] Length = 258 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 15/225 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++R MP H +Y D PYG +++ SD++ K Sbjct: 7 IGVFDSGLGGISVAREIRRDMPNEHVLYFGDSANAPYGTKSPEQVRE-----LSDVIVKR 61 Query: 76 ---QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTP 129 Q V + VIACNTA + +ELR T+ + +G PA+K A + + + + +TP Sbjct: 62 FVEQGVKAVVIACNTATSAAANELRDTY-DIPIIGMEPALKVACDRGHGKRQRVIVAATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TLR + L+ + + H + VE G D + + + F + + Sbjct: 121 LTLRERKFAVLMDRFKAD---HTIFPEPCPGLVEIVEHGQLDDHDVVMRTLHQYFDQYDL 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+ FR+L P +D ++ R +L Sbjct: 178 STIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVL 222 >gi|294795084|ref|ZP_06760219.1| glutamate racemase [Veillonella sp. 3_1_44] gi|294454446|gb|EFG22820.1| glutamate racemase [Veillonella sp. 3_1_44] Length = 272 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 14/213 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 11 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TYLACRIAETL 69 Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +K QPV L VIACNT FT++ + S+ +G +K A ++S I I++T AT Sbjct: 70 EK-QPVKLMVIACNT-FTVVALDAVRELVSVPVIGVSQGVKTAINKSKSKTIGIMATVAT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--EDEIKKEIEGCFIEK-E 188 + ++ IH +V+ H V ++ E A I+ +D +E+ ++E Sbjct: 128 V-----NSHIHKHVALEVDHEV--LVWEQPCPELAGLIEQGHLDDYFVREVCKDYLEPLL 180 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 + +V+VL CTH+P + + +L+ + ++D Sbjct: 181 SREIEVVVLGCTHFPFVQPLLEELTSCRIQFID 213 >gi|293364220|ref|ZP_06610946.1| glutamate racemase [Streptococcus oralis ATCC 35037] gi|307702427|ref|ZP_07639383.1| glutamate racemase [Streptococcus oralis ATCC 35037] gi|291317066|gb|EFE57493.1| glutamate racemase [Streptococcus oralis ATCC 35037] gi|307624009|gb|EFO02990.1| glutamate racemase [Streptococcus oralis ATCC 35037] Length = 264 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAKL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|110597807|ref|ZP_01386090.1| Glutamate racemase [Chlorobium ferrooxidans DSM 13031] gi|110340532|gb|EAT59015.1| Glutamate racemase [Chlorobium ferrooxidans DSM 13031] Length = 272 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 26/233 (11%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD-- 70 ++ I IFDSGIGGL V++ +R +P IY D PYG ++K + D Sbjct: 9 ESPIGIFDSGIGGLTVVKAIRAALPSERLIYFGDTARVPYGPKSQITIRK---YAADDTA 65 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTP 129 IL +YQP L ++ACNT L D + + + +G + A + A T + I ++ T Sbjct: 66 ILMRYQPKLIIVACNTVSALALDVVEKSCSGIPVIGVLKAGAELAVQVTGNNRIGVIGTQ 125 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE-------IKKEIEG 182 AT+ SN +Y + I+L++ S V AC + + E K I G Sbjct: 126 ATV----CSN---AYARE--INLLNE---ESAVVSKACPLFVPLAEEGFIDHPATKLIAG 173 Query: 183 CFIEKEGKR-TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++ + K D +VL CTHYP++ V + + +D+++++A + + LL Sbjct: 174 EYLAEIRKHDIDTLVLGCTHYPILKRVIADIVGPGIRIIDSAEAVALKTKELL 226 >gi|189485683|ref|YP_001956624.1| glutamate racemase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287642|dbj|BAG14163.1| glutamate racemase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 275 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 18/236 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 I+N+P I IFDSG GGL V+ + ++P IY D PYG+ + K Sbjct: 10 INNHP--------IGIFDSGFGGLTVMSAITKMLPLESLIYFGDTAHVPYGSKSKDIVIK 61 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSG 121 + S L + + L VIACNTA L+ T + +G + +AA Y +++ Sbjct: 62 YSKEITS-FLMRCKVKLIVIACNTASAFALSILQKTL-KVPVIGVIEPGSKAAVYASKNK 119 Query: 122 LISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I I+ T T+ ++Y + + +S+ ++ + + VEE +I + +KK I Sbjct: 120 KIGIIGTEGTINSKSYLREI--NRISKSKVYQQACPLFVPLVEEGWSSGEITDSIVKKYI 177 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 E K+ D +VL CTHYPL+ + + V ++D++ ++++ + +L + Sbjct: 178 EPLL----NKKIDTLVLGCTHYPLLRETLEKNAGGNVVFIDSAKAVSQEVKNILKK 229 >gi|261408424|ref|YP_003244665.1| glutamate racemase [Paenibacillus sp. Y412MC10] gi|329928213|ref|ZP_08282144.1| glutamate racemase [Paenibacillus sp. HGF5] gi|261284887|gb|ACX66858.1| glutamate racemase [Paenibacillus sp. Y412MC10] gi|328937981|gb|EGG34381.1| glutamate racemase [Paenibacillus sp. HGF5] Length = 268 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 22/256 (8%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-- 69 +Q +I I DSG+GGL V +++ +P IY D PYG ++ LF+ Sbjct: 1 MQQAIAILDSGVGGLTVAKEVMRQLPREKIIYFGDTARAPYGPRTPEEVR-----LFTEQ 55 Query: 70 --DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 D L +Y P + VIACNTA D + S P + +G + P + A + T++G + ++ Sbjct: 56 IVDYLIQYDPKMIVIACNTATAAALDYISSKVP-VPVIGVIHPGARAAISATKTGHVGVI 114 Query: 127 STPATL-RRTYTSNL--IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 T T+ YT+ L + Y+ V S V G+ +D ++ +E Sbjct: 115 GTVGTIGSGAYTAALKQLSPYIG------VESQACPELVPLVEHGLFRSKDSLQV-VERS 167 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQT 242 + D ++L CTHYP +++ + + V + ++D AR +L + + Sbjct: 168 LRGIKDTSIDCLILGCTHYPFLMNTIQTVMGPNVKLISSADETAREVSTILYDKGQLASS 227 Query: 243 RVFDDHALFLSGKPDI 258 H F +G P+I Sbjct: 228 MEGPVHQFFCTGDPEI 243 >gi|306824554|ref|ZP_07457900.1| glutamate racemase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|315611776|ref|ZP_07886698.1| glutamate racemase [Streptococcus sanguinis ATCC 49296] gi|322375928|ref|ZP_08050439.1| glutamate racemase [Streptococcus sp. C300] gi|331265743|ref|YP_004325373.1| glutamate racemase [Streptococcus oralis Uo5] gi|304433341|gb|EFM36311.1| glutamate racemase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|315316191|gb|EFU64221.1| glutamate racemase [Streptococcus sanguinis ATCC 49296] gi|321279196|gb|EFX56238.1| glutamate racemase [Streptococcus sp. C300] gi|326682415|emb|CBZ00032.1| glutamate racemase [Streptococcus oralis Uo5] Length = 264 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|258511815|ref|YP_003185249.1| glutamate racemase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478541|gb|ACV58860.1| glutamate racemase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 281 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 8/226 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL V M+ +P +Y D PYG+ + + +R L Sbjct: 5 HRPIGVFDSGIGGLTVFHAMKRRLPHESMVYFGDRARCPYGDRDPDEV-ERFALEIGRYL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ L V+ACNTA + L+ + +G + P QA +++G I ++ T T Sbjct: 64 ERLGIKLLVVACNTATAVALPRLKQEL-GIDVVGVIEPGASQAIEASETGRIGVIGTSVT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + V+ + VE+ ++ D ++ + R Sbjct: 123 VSSHAYAEALRVLRPDVSVVEVACPLFVPLVEQG----HVEGDAVEAVVRESLQPLLEAR 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPR 236 D +VL CTHYPL++ V R++ + + ++D+ A R AR L R Sbjct: 179 IDTLVLGCTHYPLLMPVIRRVLGPSIRVISSADATAERVARVLAER 224 >gi|227524349|ref|ZP_03954398.1| glutamate racemase [Lactobacillus hilgardii ATCC 8290] gi|227088580|gb|EEI23892.1| glutamate racemase [Lactobacillus hilgardii ATCC 8290] Length = 264 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 7/211 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL VL+++ ++P +I+V D PYG ++K L +D + K Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRK-LTKRIADYMLKQNVK 59 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNT+ D L+ P + +G + P + A A T + I +++T T+ Sbjct: 60 MFVIACNTSTAASLDYLKRILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVSSGVY 118 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +I S + ++ + + VE G ++ +++ ++ F +K D +VL Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQL-AYFHDKS---IDTLVL 174 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 CTH+P++ + +D +D S A+ Sbjct: 175 GCTHFPVLEAEIKGAVNSGIDLIDPGISTAK 205 >gi|300310872|ref|YP_003774964.1| glutamate racemase [Herbaspirillum seropedicae SmR1] gi|300073657|gb|ADJ63056.1| glutamate racemase protein [Herbaspirillum seropedicae SmR1] Length = 297 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 23/243 (9%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 + P +I IFDSGIGGL VL+ + +P +Y AD PYG+ + + +R Sbjct: 18 SSSPMPTAADAAIGIFDSGIGGLSVLRHIHAALPREQLLYFADSGYAPYGDKTEAQIVER 77 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 + + S +L++ L V+ACNTA +R+ +P + +G P +K AA T+S + Sbjct: 78 SLAIASFLLEQRVKAL-VVACNTATAAAIQAIRTRWPQLLVVGIEPGLKPAAQLTRSRTV 136 Query: 124 SILSTPATL--------RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 +L+T +TL + + Y+ Q + LV +I + A +++ E Sbjct: 137 GVLATRSTLASQRFALLQAQMQAQYQVRYLPQACVGLVD-LIEKGELHSPAT-VQLLERY 194 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPL----IVHVFRQLSPWPVDWLDNSDSIARRAR 231 + +E + D +VL CTHYP I V + L D +D ++ R+ + Sbjct: 195 LAPLLE--------QGADTLVLGCTHYPFVRPAIESVCKSLVGETPDIIDTGQAVTRQLQ 246 Query: 232 CLL 234 LL Sbjct: 247 RLL 249 >gi|289577814|ref|YP_003476441.1| glutamate racemase [Thermoanaerobacter italicus Ab9] gi|289527527|gb|ADD01879.1| glutamate racemase [Thermoanaerobacter italicus Ab9] Length = 264 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 32/254 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+ Sbjct: 6 IGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61 Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Q V + VIACNT +I +S + + F + AA YT + I +++T T+ Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTV 118 Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++Y N+ I Y C + L+ + S + C Sbjct: 119 ESKSYEKNIKIIDKNIKVYQKACPEFVPLIEKGLYNSPIAYETAS-------------NC 165 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 E + + D +VL CTHYPL++ V ++ V +D + +A + L R + + Sbjct: 166 LKELKERDIDTLVLGCTHYPLMMEVIEEIVGENVKIVDPAIKLAYDVKDYLLRRDLFNIQ 225 Query: 244 VFDDHALFLSGKPD 257 F+SG D Sbjct: 226 NIGKTKFFVSGDKD 239 >gi|154488995|ref|ZP_02029844.1| hypothetical protein BIFADO_02305 [Bifidobacterium adolescentis L2-32] gi|154083132|gb|EDN82177.1| hypothetical protein BIFADO_02305 [Bifidobacterium adolescentis L2-32] Length = 258 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 15/225 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++R MP H +Y D PYG +++ SD++ K Sbjct: 7 IGVFDSGLGGISVAREIRRDMPNEHVLYFGDSANAPYGTKSPEQVRE-----LSDVIVKR 61 Query: 76 ---QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTP 129 Q V + VIACNTA + +ELR T+ + +G PA+K A + + + + +TP Sbjct: 62 FVEQGVKAVVIACNTATSAAANELRDTY-DIPIIGMEPALKVACDRGHGKRQHVIVAATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TLR + L+ + + H + VE G D + + + F + + Sbjct: 121 LTLRERKFAVLMDRFKAD---HTIFPEPCPGLVEIVEHGQLDDHDVVMRTLHQYFDQYDL 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+ FR+L P +D ++ R +L Sbjct: 178 STIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVL 222 >gi|229163447|ref|ZP_04291398.1| Glutamate racemase [Bacillus cereus R309803] gi|228620016|gb|EEK76891.1| Glutamate racemase [Bacillus cereus R309803] Length = 269 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 16/264 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 KRTD+ ++L CTHYP++ V + + V + + D AR +L +N + + Sbjct: 174 KRTDIDTLILGCTHYPILGPVIKNVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232 Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268 DH +GK D+ + FG Sbjct: 233 -SDHLFLTTGKIDLFKEIASKWFG 255 >gi|306830119|ref|ZP_07463303.1| glutamate racemase [Streptococcus mitis ATCC 6249] gi|304427645|gb|EFM30741.1| glutamate racemase [Streptococcus mitis ATCC 6249] Length = 264 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAKL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|255282581|ref|ZP_05347136.1| glutamate racemase [Bryantella formatexigens DSM 14469] gi|255266874|gb|EET60079.1| glutamate racemase [Bryantella formatexigens DSM 14469] Length = 275 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 19/257 (7%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLM 65 ++ + + IFDSG+GGL V +++ +PE +Y D PYG+ + ++ + Sbjct: 4 RERERPVGIFDSGVGGLTVTREVMRNIPEERIVYFGDTARVPYGSKSKETILRYSRQIVR 63 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124 FL + + V+ACNTA +E+R P + +G V P K A A T++ I Sbjct: 64 FLLTQDVKAI-----VVACNTASAFALEEIRHELP-VPIIGVVRPGAKVACAATKNNRIG 117 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 ++ T T+ + LI + + + VEE + E+ ++ + G Sbjct: 118 VIGTKGTIASGLYTELIRQIKPDAEVIGKACPLFVPLVEEGMMKDTVTEEVARRYLAGL- 176 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + + D ++L CTHYPL+ + ++ V ++ + A R LL + T Sbjct: 177 ---QEQDIDTLILGCTHYPLLRSMIGKIMGEGVTLVNPAYETACSLRTLLIQEGLQNTEP 233 Query: 245 F----DDHALFLSGKPD 257 + H ++S P+ Sbjct: 234 LAEGENPHRFYVSDAPE 250 >gi|282849105|ref|ZP_06258490.1| glutamate racemase [Veillonella parvula ATCC 17745] gi|282580809|gb|EFB86207.1| glutamate racemase [Veillonella parvula ATCC 17745] Length = 267 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 14/213 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TYLACRIAETL 64 Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +K QPV L VIACNT FT++ + S+ +G +K A ++S I I++T AT Sbjct: 65 EK-QPVKLMVIACNT-FTVVALDAVRELVSVPVIGVSQGVKTAINKSKSKTIGIMATVAT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--EDEIKKEIEGCFIEK-E 188 + ++ IH +V+ H V ++ E A I+ +D +EI ++E Sbjct: 123 V-----NSHIHKHVALEVDHEV--LVWEQPCPELAGLIEQGHLDDYFVREICKEYLEPLL 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 + +V+VL CTH+P + + +L+ + ++D Sbjct: 176 SREIEVVVLGCTHFPFVQPLLEELTSGRIRFID 208 >gi|157164289|ref|YP_001466834.1| glutamate racemase [Campylobacter concisus 13826] gi|166231029|sp|A7ZDH6|MURI_CAMC1 RecName: Full=Glutamate racemase gi|112801263|gb|EAT98607.1| glutamate racemase [Campylobacter concisus 13826] Length = 262 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 14/219 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDI--L 72 I IFDSG+GGL VL + + E+ F+Y AD PYG D LK F F + L Sbjct: 3 IGIFDSGLGGLSVLNEALSKLSEHEFLYYADVKNVPYGQKSRDEILK----FSFDAVKFL 58 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS--ILSTPA 130 K V+ACNTA ++ ELR+ S+ +G PA+K+A + + +++TP Sbjct: 59 VKNGAKAVVVACNTATSVAIKELRANL-SVPIIGMEPAVKKAHDLSHDDALKTLVIATPV 117 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ LI + ++ L++ R+ +A + + + +K ++ ++ + Sbjct: 118 TVNGAKLKELIINLNAKDKTELLA----LPRLVNFAEKAEFESENVKSYLKEELVKFDLS 173 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + D +VL CTH+ R++ P V +D ++ +R Sbjct: 174 KFDFLVLGCTHFNYFKDSLREILPPNVSIIDGNEGTIKR 212 >gi|77920315|ref|YP_358130.1| glutamate racemase [Pelobacter carbinolicus DSM 2380] gi|77546398|gb|ABA89960.1| glutamate racemase [Pelobacter carbinolicus DSM 2380] Length = 266 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 7/215 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I +FDSG+GGL VL++++ L+P +Y+ D PYG + A +R + L Sbjct: 4 RAIGVFDSGVGGLTVLKEIQRLLPGEEVLYLGDTARVPYGT-KSPATVRRYALEAASFLT 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + + + V+ACNTA ++ +L + F + +G + P ++A + T++G I ++ T T+ Sbjct: 63 RRRVKMLVVACNTASSVALGDLENRF-KLPVIGVIEPGARRAVSVTRTGRIGVIGTEGTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + I + + + VEE + + E Sbjct: 122 KSGAYTLAIKQLAPDADVVALHCPLFVPLVEEG----WLDHPVTRLAAEEYLGSLRHHGI 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTHYPL+ V +Q+ V +D+++ A Sbjct: 178 DTLVLGCTHYPLLKPVLQQVLGPQVMLIDSAEETA 212 >gi|194335598|ref|YP_002017392.1| glutamate racemase [Pelodictyon phaeoclathratiforme BU-1] gi|194308075|gb|ACF42775.1| glutamate racemase [Pelodictyon phaeoclathratiforme BU-1] Length = 273 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 16/228 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD-- 70 + I IFDSGIGGL V++ ++ +P +Y D PYG ++K + D Sbjct: 10 EAPIGIFDSGIGGLTVVKAVQAALPFERILYFGDTARVPYGPKSQVTIRK---YAADDTA 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129 +L +YQP + ++ACNT L D ++ + + G + A + A T++ I ++ T Sbjct: 67 MLMRYQPKIIIVACNTVSALALDVVQKSCGVIPVTGVLRAGARLATEVTRNNRIGVIGTR 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY---ACGIKIKEDEIKKEIEGCFIE 186 AT+ I+ + S+ + + + EE ++ +E E I Sbjct: 127 ATVSSNAYGIAINEFNSEIEVVSRACPLFVPLAEEGFIDHLATRLIAEEYLAE-----IT 181 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +EG D +VL CTHYP++ V ++ + +D+++++A R R LL Sbjct: 182 REG--IDTLVLGCTHYPILRKVIEEIVGPEIRIIDSAEAVALRTRELL 227 >gi|167038101|ref|YP_001665679.1| glutamate racemase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|307266301|ref|ZP_07547841.1| glutamate racemase [Thermoanaerobacter wiegelii Rt8.B1] gi|320116507|ref|YP_004186666.1| glutamate racemase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|229486282|sp|B0KBP8|MURI_THEP3 RecName: Full=Glutamate racemase gi|166856935|gb|ABY95343.1| glutamate racemase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|306918679|gb|EFN48913.1| glutamate racemase [Thermoanaerobacter wiegelii Rt8.B1] gi|319929598|gb|ADV80283.1| glutamate racemase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 264 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 32/254 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+ Sbjct: 6 IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61 Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Q V + VIACNT +I +S + + F + AA YT + I +++T T+ Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTV 118 Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++Y N+ I Y C + L+ + S + Y K C Sbjct: 119 ESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPI-AYETASK------------C 165 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 E + K D +VL CTHYPL+ V ++ V +D + +A + L + + + Sbjct: 166 LKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQ 225 Query: 244 VFDDHALFLSGKPD 257 + F+SG D Sbjct: 226 IRGKAEFFVSGDKD 239 >gi|238020101|ref|ZP_04600527.1| hypothetical protein VEIDISOL_01982 [Veillonella dispar ATCC 17748] gi|237863625|gb|EEP64915.1| hypothetical protein VEIDISOL_01982 [Veillonella dispar ATCC 17748] Length = 267 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 18/225 (8%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TYLACHIAEAL 64 Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +K QPV L VIACNT + D +R S+ +G +K A + ++S I I++T AT Sbjct: 65 EK-QPVKLMVIACNTFTVVALDAVRERV-SVPVIGVSQGVKTAISQSKSKTIGIMATVAT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--EDEIKKEIEGCFIEK-E 188 + ++ IH +V+ H V ++ E A I+ +D +++ ++E Sbjct: 123 V-----NSHIHKHVALEVDHEV--LVWEQPCPELAGLIEQGHLDDHFVRDVCTEYLEPLL 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD----NSDSIARR 229 + +V+VL CTH+P + + +L+ + ++D S+ + RR Sbjct: 176 SREIEVVVLGCTHFPFVQPLLEELTSGRIQFIDPAFETSELVRRR 220 >gi|189500924|ref|YP_001960394.1| glutamate racemase [Chlorobium phaeobacteroides BS1] gi|189496365|gb|ACE04913.1| glutamate racemase [Chlorobium phaeobacteroides BS1] Length = 269 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 9/232 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSGIGGL V++ ++ L+P IY D PYG+ ++K + IL KYQP Sbjct: 11 IFDSGIGGLTVVKAIQALLPSERIIYFGDTARVPYGSKSQVTIRKYAQD-DTGILMKYQP 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPATLRRTY 136 L ++ACNT L D ++ + LG + A + A +++ + ++ T AT+ Sbjct: 70 KLIIVACNTVSALALDVVKRAGHGIPVLGVLEAGAELAVENSRNNQVGVIGTRATVLSNA 129 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 +++ + + + + EE E I +E ++ D +V Sbjct: 130 YPLAMNALNPEVEVFSAACPLFVPLAEEGFIDHPAAE-MIAREYLLPLLD---HGIDTLV 185 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVF 245 L CTHYP++ + +++ V +D+++++A +++ +L +N Q VF Sbjct: 186 LGCTHYPILRKMIAEIAGQEVRIIDSAEAVALKSKEMLAGNGMLNGSQCHVF 237 >gi|148989674|ref|ZP_01821006.1| glutamate racemase [Streptococcus pneumoniae SP6-BS73] gi|147924991|gb|EDK76073.1| glutamate racemase [Streptococcus pneumoniae SP6-BS73] Length = 264 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGAKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|150018421|ref|YP_001310675.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052] gi|149904886|gb|ABR35719.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052] Length = 267 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 8/222 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSGIGG+ VL ++P +IY AD PYG +KK ++ I+++ Sbjct: 6 FDSGIGGITVLYDTLKVLPNEDYIYYADTSNVPYGPKPKDEVKKYILNAIDFIVEQGVKA 65 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLRRTY 136 + VIACNTA ++ + LRS + S+ +G PA+K A + + + + +T TL+ Sbjct: 66 V-VIACNTATSVAIEALRSKY-SIPIIGMEPAVKPAIEKNKDMNKRVLVTATALTLKEEK 123 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 NLI+ ++ H+V + L V +++ ++ E + ++ + + + IV Sbjct: 124 LHNLIYKLDNE---HVVDLLPLPGLV-QFSERLEFDEQIVLPYLKEELFKFDLNNYEAIV 179 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 L CTH+ + R+L P V +D + A+ + +L +N Sbjct: 180 LGCTHFSYYKDMVRKLVPSNVSIIDGNIGTAKNLKRILKEMN 221 >gi|153808969|ref|ZP_01961637.1| hypothetical protein BACCAC_03270 [Bacteroides caccae ATCC 43185] gi|149128302|gb|EDM19521.1| hypothetical protein BACCAC_03270 [Bacteroides caccae ATCC 43185] Length = 280 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 14/251 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILNKIREILPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-L 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ + L P LG + P ++ TQS I IL+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNNLPKIDPERRVLGVIRPTVECIGNITQSRHIGILATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ +H ++ V+ + VE + + I+K I ++ Sbjct: 131 GTIKSESYPLEVHKLYPDIQVNGVACPMWVPLVENNEAQNEGADYFIRKYINQLL--QKD 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR---CLLPRINTHQTRVFD 246 + D ++L CTHYPL++ +Q P + + + +A + C P ++ T+ + Sbjct: 189 SQIDTVILGCTHYPLLLPKIQQYIPDNIRVIAQGEYVAESLKDYLCRHPEMDIKCTK--N 246 Query: 247 DHALFLSGKPD 257 + LF + + + Sbjct: 247 NSCLFYTTEAE 257 >gi|323483118|ref|ZP_08088510.1| hypothetical protein HMPREF9474_00259 [Clostridium symbiosum WAL-14163] gi|323691441|ref|ZP_08105713.1| glutamate racemase [Clostridium symbiosum WAL-14673] gi|323403538|gb|EGA95844.1| hypothetical protein HMPREF9474_00259 [Clostridium symbiosum WAL-14163] gi|323504487|gb|EGB20277.1| glutamate racemase [Clostridium symbiosum WAL-14673] Length = 275 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 7/220 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V++++ MP+ +Y D PYGN + + + + K Sbjct: 7 IGVFDSGVGGLTVMREIMRQMPDERIVYFGDTARVPYGNKSKETVIRYSQQIIRFLQTKE 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134 + VIACNTA + + + + +G + A +AA T++G I I+ T AT+R Sbjct: 67 VKAI-VIACNTASACALEAVEKSL-DIPIIGVISAGSRAAVEATRNGKIGIIGTEATIRS 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 S + + + VEE + DEI C +GK D Sbjct: 125 GVYSEEMKQLRGDIEVTGKPCPLFVPLVEEGLLHDSVT-DEIASRYLACL---KGKYIDT 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +V+ CTHYPL+ F++L V ++ + A + LL Sbjct: 181 LVMGCTHYPLLRSTFKRLMGDDVTLVNPAYETAVELKGLL 220 >gi|237755668|ref|ZP_04584279.1| glutamate racemase [Sulfurihydrogenibium yellowstonense SS-5] gi|237692180|gb|EEP61177.1| glutamate racemase [Sulfurihydrogenibium yellowstonense SS-5] Length = 260 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 9/228 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL V +++ P+ Y+ D PYGN + + + S + Y Sbjct: 3 IGVFDSGIGGLTVFKEIAASFPKVDLYYLGDTARVPYGNKSKTTIIRYSVECASYLYHNY 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 VIACNTA + D LR P + +G V P + A +++ I ++ T AT++ Sbjct: 63 NVDAIVIACNTASSYALDTLREILP-IPVIGVVQPGAESAVKVSKNKKIGVIGTSATIKS 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + S ++ + + VEE ++ + +K+ ++ K G D Sbjct: 122 NSYLETLKSLDKDLEVYQKACPLFVPLVEEGWIDNEVAKLTVKEYLDDLV--KTG--IDT 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 ++L CTHYPL+ + + L P ++ +D+S +I + + ++N +T Sbjct: 178 LILGCTHYPLLKNTIKGLYPH-LNIVDSSVAIVEHLKNI--KLNIEET 222 >gi|95931009|ref|ZP_01313737.1| Glutamate racemase [Desulfuromonas acetoxidans DSM 684] gi|95132905|gb|EAT14576.1| Glutamate racemase [Desulfuromonas acetoxidans DSM 684] Length = 289 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 15/227 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 +N+I +FDSG+GGL VL ++R L+P + IY+ D PYG+ + ++ FL Sbjct: 16 ENAIGVFDSGVGGLTVLHELRRLLPGENLIYLGDTARVPYGSKSPETVCSYSEQAAEFLL 75 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Q + V+ACNTA + + L+ P +P + A ++ ++ ++ T Sbjct: 76 AK-----QVKMIVVACNTASSFALERLQQCLPVPVVGVILPGARCAVRLSRRHVVGVIGT 130 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMI-LASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T+ + + Q + +VS L + E ++ +E +E+ Sbjct: 131 HGTVSSDAYPRALKAL--QPDMKVVSEPCPLFVPLAEEGWAEHAVAHQVAREYLAPLLEQ 188 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + D +VL CTHYPL+ RQ+ P V +D++ A + LL Sbjct: 189 Q---IDTLVLGCTHYPLLKPTLRQVLPDTVQLVDSAQETALEVKELL 232 >gi|221195778|ref|ZP_03568831.1| glutamate racemase [Atopobium rimae ATCC 49626] gi|221184252|gb|EEE16646.1| glutamate racemase [Atopobium rimae ATCC 49626] Length = 284 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 7/217 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSGIGG+ VL+++ +P FI+ D PYG+ ++ + +D+ Sbjct: 28 VFDSGIGGISVLKRLVTELPYERFIFYGDSAHAPYGSKTPQQVQALSGAITDTFVDEGAK 87 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNTA LR +P + +G PA+K AA G I +++T TL + Sbjct: 88 AI-VIACNTATAAAAQMLRERYPQLPIVGVEPALKPAALAHSQGRIIVMATARTLSLSKF 146 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L + + I ++ + +E D ++K I + D +VL Sbjct: 147 LRLEAQWGATSQIIPIAGTGIVELIEAGKANSPQMHDLLEK-----LIGQYRGTVDAVVL 201 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 CTHYP I R + VD+ D A++ LL Sbjct: 202 GCTHYPFITSQIRAVL-GNVDFYDGGTGAAQQLHRLL 237 >gi|160881908|ref|YP_001560876.1| glutamate racemase [Clostridium phytofermentans ISDg] gi|160430574|gb|ABX44137.1| glutamate racemase [Clostridium phytofermentans ISDg] Length = 270 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 12/245 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +++I +FDSGIGGL V +++ +P+ IY D PYG+ + + +L Sbjct: 4 KSAIGVFDSGIGGLTVTKEIMNQLPKEQIIYFGDTARLPYGSKSKATITMYSRQIIRFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K + VIACNTA + +R + +G + P K AA T++G I +++T T Sbjct: 64 TKDVKAI-VIACNTASAHALETVRKEI-EIPIIGVINPGAKVAAETTRNGNIGVIATEGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190 +R + + + + + VEE +D I KE+ +I++ K Sbjct: 122 IRSGIYNEFLGEIRPDLRVFGKACPLFVPLVEEGWI-----DDPITKEVVSRYIQELLYK 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDH 248 D ++L CTHYPL+ V R++ ++ ++ + AR + +L ++ + +T +H Sbjct: 177 DIDTLILGCTHYPLLRKVIREVVGDGIELVNPAYETARTLKHVLEEQKLLSEETTT-PEH 235 Query: 249 ALFLS 253 F+S Sbjct: 236 TFFVS 240 >gi|315223134|ref|ZP_07865002.1| glutamate racemase [Streptococcus anginosus F0211] gi|315187823|gb|EFU21570.1| glutamate racemase [Streptococcus anginosus F0211] Length = 264 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K ++ V+ACNTA ++ +E++ + LG + P A +Q G Sbjct: 53 YTWQLVQFLLTKNVKMI-VLACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKASQHG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I I+ TP T++ I + + + +S VE I KK + Sbjct: 111 TIGIIGTPMTIQSDIYRQKIERLLPEVEVTSLSCPKFVPLVESNELSSSIT----KKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + +GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 167 ESLMPLKGK-VDTLVLGCTHYPLLKPIIQNVMGPAVKLIDSGAECVRDISVLLNYFEINH 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|218961215|ref|YP_001740990.1| Glutamate racemase [Candidatus Cloacamonas acidaminovorans] gi|167729872|emb|CAO80784.1| Glutamate racemase [Candidatus Cloacamonas acidaminovorans] Length = 267 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 34/272 (12%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE-----DHALKKRLMF 66 ++ +I IFDSG+GGL V Q +R P IY D PYG D++L+ Sbjct: 1 MKRAIGIFDSGVGGLTVYQAIRNTFPNEDIIYFGDTARVPYGPKSPNTIIDYSLQNARFL 60 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 L I + ++ACNT+ + L++ + +G + P +Q+ T+ I + Sbjct: 61 LQQGIK------ILIVACNTSSAVAIPALQN-LSDIPVIGVIEPGAEQSVKVTKCKRIGV 113 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE----EYACGIKIKEDEIKKEIE 181 + T T+R + I + + + + + VE E+ I E+ +K Sbjct: 114 IGTEGTIRSGAYPSAIRKLLPEAFVVSSACPLFVPLVEEGWQEHPVAEVIAEEYLK---- 169 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 E + + D +VL CTHYPL+ ++ +Q+ V +D++ ++A C L N Q Sbjct: 170 ----EMKEQNIDTLVLGCTHYPLLSNIIQQVMGEEVTLVDSAMAVAEYLSCYLSAENDGQ 225 Query: 242 TR-----VFDDHALFLSGKPDIAMRRLMQGFG 268 V D+ F +IA R L G Sbjct: 226 KGRDSFYVSDNENKF----AEIAERILQHNIG 253 >gi|291280169|ref|YP_003497004.1| glutamate racemase [Deferribacter desulfuricans SSM1] gi|290754871|dbj|BAI81248.1| glutamate racemase [Deferribacter desulfuricans SSM1] Length = 253 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 8/231 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSGIGGL V + + P+ Y D PYG + K ++ Sbjct: 2 AIGVFDSGIGGLTVFRTIAKEFPKLDIYYFGDTARVPYGIRSKDTIIKYTTECIDYLVKH 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 Y VIACN+A + D L+ F ++ LG + P ++ A T++ I ++ T AT+ Sbjct: 62 YNLEAIVIACNSASSYAIDSLKIKF-NLPVLGVIDPGVRAALTTTKTNNILVIGTKATVN 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 N I+ I+ + + VEE K+ E + KE +I+K D Sbjct: 121 SNAYPNKINQISPLTKIYQQACPLFVPIVEEGLFNHKVAETMV-KEYLSPYIDK----ID 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 ++L CTHYPL+ +L P ++ +D+S +I R L N R+ Sbjct: 176 TVILGCTHYPLLKETISKLYP-DLNLVDSSIAILDDLRNLQITFNESGKRL 225 >gi|269797494|ref|YP_003311394.1| glutamate racemase [Veillonella parvula DSM 2008] gi|269094123|gb|ACZ24114.1| glutamate racemase [Veillonella parvula DSM 2008] Length = 267 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 117/238 (49%), Gaps = 16/238 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TYLACRIAETL 64 Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +K QPV L VIACNT FT++ + S+ +G +K A ++S I I++T AT Sbjct: 65 EK-QPVKLMVIACNT-FTVVALDAVRELVSVPVIGVSQGVKTAINKSKSKTIGIMATVAT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--EDEIKKEIEGCFIEK-E 188 + ++ IH +V+ H V + E A I+ +D +E+ ++E Sbjct: 123 V-----NSHIHKHVALEVDHEV--FVWEQPCPELAGLIEQGHLDDYFVREVCKDYLEPLL 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRV 244 + +V+VL CTH+P + + +L+ + ++D + + R L N HQ V Sbjct: 176 SREIEVVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNHQDTV 233 >gi|313205149|ref|YP_004043806.1| glutamate racemase [Paludibacter propionicigenes WB4] gi|312444465|gb|ADQ80821.1| glutamate racemase [Paludibacter propionicigenes WB4] Length = 282 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 29/244 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL +L+K+R +PEY +IY+ D+ PYG + K + + + + Sbjct: 14 IGIFDSGYGGLTILEKIRTELPEYDYIYLGDNARTPYGTRSFDVVYKFTLECVTKLFE-M 72 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L V+ACNTA ++ + +L + LG + P ++ A T+S I +L+T Sbjct: 73 GCQLVVLACNTASAKALRSIQQRDLPLLDANRRVLGVIRPTVEAVGAMTRSKHIGLLATS 132 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186 T++ +SY + H L +++ S AC + I+ +E K E F+ Sbjct: 133 GTVQS-------NSYPLEIH-KLHDDIVVTSE----ACPMWVPLIENNEHKSEGADYFVR 180 Query: 187 KEGK-------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 K + + D I+L CTHYPL+ + L P + + + +A+ L R Sbjct: 181 KNVEHLLAADPKIDTIMLGCTHYPLLEDKIKSLLPKEISVVSQGEIVAKSLADYLQRHTE 240 Query: 240 HQTR 243 ++R Sbjct: 241 MESR 244 >gi|15901709|ref|NP_346313.1| glutamate racemase [Streptococcus pneumoniae TIGR4] gi|15903738|ref|NP_359288.1| glutamate racemase [Streptococcus pneumoniae R6] gi|111657289|ref|ZP_01408054.1| hypothetical protein SpneT_02001506 [Streptococcus pneumoniae TIGR4] gi|116516596|ref|YP_817111.1| glutamate racemase [Streptococcus pneumoniae D39] gi|148993339|ref|ZP_01822879.1| glutamate racemase [Streptococcus pneumoniae SP9-BS68] gi|148998745|ref|ZP_01826183.1| glutamate racemase [Streptococcus pneumoniae SP11-BS70] gi|149006464|ref|ZP_01830163.1| glutamate racemase [Streptococcus pneumoniae SP18-BS74] gi|149011254|ref|ZP_01832501.1| glutamate racemase [Streptococcus pneumoniae SP19-BS75] gi|149025005|ref|ZP_01836385.1| glutamate racemase [Streptococcus pneumoniae SP23-BS72] gi|168483413|ref|ZP_02708365.1| glutamate racemase [Streptococcus pneumoniae CDC1873-00] gi|168487311|ref|ZP_02711819.1| glutamate racemase [Streptococcus pneumoniae CDC1087-00] gi|168489841|ref|ZP_02714040.1| glutamate racemase [Streptococcus pneumoniae SP195] gi|168491804|ref|ZP_02715947.1| glutamate racemase [Streptococcus pneumoniae CDC0288-04] gi|168494203|ref|ZP_02718346.1| glutamate racemase [Streptococcus pneumoniae CDC3059-06] gi|168574930|ref|ZP_02720893.1| glutamate racemase [Streptococcus pneumoniae MLV-016] gi|169833125|ref|YP_001695247.1| glutamate racemase [Streptococcus pneumoniae Hungary19A-6] gi|182684824|ref|YP_001836571.1| glutamate racemase [Streptococcus pneumoniae CGSP14] gi|221232616|ref|YP_002511770.1| glutamate racemase [Streptococcus pneumoniae ATCC 700669] gi|225855314|ref|YP_002736826.1| glutamate racemase [Streptococcus pneumoniae JJA] gi|225857468|ref|YP_002738979.1| glutamate racemase [Streptococcus pneumoniae P1031] gi|225859643|ref|YP_002741153.1| glutamate racemase [Streptococcus pneumoniae 70585] gi|225861674|ref|YP_002743183.1| glutamate racemase [Streptococcus pneumoniae Taiwan19F-14] gi|298230339|ref|ZP_06964020.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298503608|ref|YP_003725548.1| glutamate racemase [Streptococcus pneumoniae TCH8431/19A] gi|303254610|ref|ZP_07340712.1| glutamate racemase [Streptococcus pneumoniae BS455] gi|303258827|ref|ZP_07344807.1| glutamate racemase [Streptococcus pneumoniae SP-BS293] gi|303261990|ref|ZP_07347936.1| glutamate racemase [Streptococcus pneumoniae SP14-BS292] gi|303263853|ref|ZP_07349775.1| glutamate racemase [Streptococcus pneumoniae BS397] gi|303265612|ref|ZP_07351511.1| glutamate racemase [Streptococcus pneumoniae BS457] gi|303269880|ref|ZP_07355623.1| glutamate racemase [Streptococcus pneumoniae BS458] gi|307068494|ref|YP_003877460.1| glutamate racemase [Streptococcus pneumoniae AP200] gi|307128076|ref|YP_003880107.1| glutamate racemase [Streptococcus pneumoniae 670-6B] gi|307710764|ref|ZP_07647192.1| glutamate racemase [Streptococcus mitis SK321] gi|54037869|sp|P63641|MURI_STRR6 RecName: Full=Glutamate racemase gi|54041262|sp|P63640|MURI_STRPN RecName: Full=Glutamate racemase gi|122278043|sp|Q04IS7|MURI_STRP2 RecName: Full=Glutamate racemase gi|229486278|sp|B1I891|MURI_STRPI RecName: Full=Glutamate racemase gi|229486279|sp|B2ISX9|MURI_STRPS RecName: Full=Glutamate racemase gi|254766126|sp|C1C9E7|MURI_STRP7 RecName: Full=Glutamate racemase gi|254766127|sp|B8ZNI5|MURI_STRPJ RecName: Full=Glutamate racemase gi|254766129|sp|C1CGA5|MURI_STRZJ RecName: Full=Glutamate racemase gi|254766130|sp|C1CMJ1|MURI_STRZP RecName: Full=Glutamate racemase gi|254766131|sp|C1CTB1|MURI_STRZT RecName: Full=Glutamate racemase gi|14973385|gb|AAK75953.1| glutamate racemase [Streptococcus pneumoniae TIGR4] gi|15459371|gb|AAL00499.1| Glutamate racemase [Streptococcus pneumoniae R6] gi|116077172|gb|ABJ54892.1| glutamate racemase [Streptococcus pneumoniae D39] gi|147755439|gb|EDK62488.1| glutamate racemase [Streptococcus pneumoniae SP11-BS70] gi|147761762|gb|EDK68725.1| glutamate racemase [Streptococcus pneumoniae SP18-BS74] gi|147764244|gb|EDK71175.1| glutamate racemase [Streptococcus pneumoniae SP19-BS75] gi|147928106|gb|EDK79125.1| glutamate racemase [Streptococcus pneumoniae SP9-BS68] gi|147929498|gb|EDK80493.1| glutamate racemase [Streptococcus pneumoniae SP23-BS72] gi|168995627|gb|ACA36239.1| glutamate racemase [Streptococcus pneumoniae Hungary19A-6] gi|172043246|gb|EDT51292.1| glutamate racemase [Streptococcus pneumoniae CDC1873-00] gi|182630158|gb|ACB91106.1| glutamate racemase [Streptococcus pneumoniae CGSP14] gi|183569790|gb|EDT90318.1| glutamate racemase [Streptococcus pneumoniae CDC1087-00] gi|183571721|gb|EDT92249.1| glutamate racemase [Streptococcus pneumoniae SP195] gi|183573878|gb|EDT94406.1| glutamate racemase [Streptococcus pneumoniae CDC0288-04] gi|183575767|gb|EDT96295.1| glutamate racemase [Streptococcus pneumoniae CDC3059-06] gi|183578940|gb|EDT99468.1| glutamate racemase [Streptococcus pneumoniae MLV-016] gi|220675078|emb|CAR69656.1| glutamate racemase [Streptococcus pneumoniae ATCC 700669] gi|225720017|gb|ACO15871.1| glutamate racemase [Streptococcus pneumoniae 70585] gi|225723477|gb|ACO19330.1| glutamate racemase [Streptococcus pneumoniae JJA] gi|225725094|gb|ACO20946.1| glutamate racemase [Streptococcus pneumoniae P1031] gi|225728008|gb|ACO23859.1| glutamate racemase [Streptococcus pneumoniae Taiwan19F-14] gi|298239203|gb|ADI70334.1| glutamate racemase [Streptococcus pneumoniae TCH8431/19A] gi|301802572|emb|CBW35333.1| glutamate racemase [Streptococcus pneumoniae INV200] gi|302598322|gb|EFL65366.1| glutamate racemase [Streptococcus pneumoniae BS455] gi|302637073|gb|EFL67562.1| glutamate racemase [Streptococcus pneumoniae SP14-BS292] gi|302640328|gb|EFL70783.1| glutamate racemase [Streptococcus pneumoniae SP-BS293] gi|302640583|gb|EFL70987.1| glutamate racemase [Streptococcus pneumoniae BS458] gi|302644739|gb|EFL74987.1| glutamate racemase [Streptococcus pneumoniae BS457] gi|302646891|gb|EFL77116.1| glutamate racemase [Streptococcus pneumoniae BS397] gi|306410031|gb|ADM85458.1| Glutamate racemase [Streptococcus pneumoniae AP200] gi|306485138|gb|ADM92007.1| glutamate racemase [Streptococcus pneumoniae 670-6B] gi|307617370|gb|EFN96542.1| glutamate racemase [Streptococcus mitis SK321] gi|327390042|gb|EGE88387.1| glutamate racemase [Streptococcus pneumoniae GA04375] gi|332072219|gb|EGI82704.1| glutamate racemase [Streptococcus pneumoniae GA17545] gi|332072704|gb|EGI83187.1| glutamate racemase [Streptococcus pneumoniae GA17570] gi|332073032|gb|EGI83512.1| glutamate racemase [Streptococcus pneumoniae GA41301] gi|332199901|gb|EGJ13976.1| glutamate racemase [Streptococcus pneumoniae GA41317] gi|332200436|gb|EGJ14509.1| glutamate racemase [Streptococcus pneumoniae GA47368] Length = 264 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|15605845|ref|NP_213222.1| glutamate racemase [Aquifex aeolicus VF5] gi|6225737|sp|O66662|MURI_AQUAE RecName: Full=Glutamate racemase gi|2983010|gb|AAC06621.1| glutamate racemase [Aquifex aeolicus VF5] Length = 254 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 9/213 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GG+ VL+ +R P +Y+ D PYG + + + + DK Sbjct: 3 IGIFDSGAGGMTVLKAIREAYPNVDVVYLGDTARVPYGIRSKETIVRYSKECANFLKDKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +L V+ACNTA +EL+ FP F P +K+A +++ I ++ T AT++ Sbjct: 63 VDLL-VVACNTASAYALEELKREFPFPVFGVIEPGVKEALRKSKTKRIGVIGTQATIKSG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + ++ + + VEE + E EI K++ +++ + D + Sbjct: 122 AYQEALKR--AGAEVYSKACPLFVPLVEE-----GMIEGEIPKKVVEHYLKDFKGKVDTL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +L CTHYPL+ + V+ +D+S + A+ Sbjct: 175 ILGCTHYPLLKREIQNFLEG-VNVIDSSRATAK 206 >gi|194397943|ref|YP_002038470.1| glutamate racemase [Streptococcus pneumoniae G54] gi|226707591|sp|B5E1Z3|MURI_STRP4 RecName: Full=Glutamate racemase gi|194357610|gb|ACF56058.1| glutamate racemase [Streptococcus pneumoniae G54] Length = 264 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRKKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|331002651|ref|ZP_08326166.1| glutamate racemase [Lachnospiraceae oral taxon 107 str. F0167] gi|330407064|gb|EGG86568.1| glutamate racemase [Lachnospiraceae oral taxon 107 str. F0167] Length = 267 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 16/240 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +++ MP+ +Y D PYG+ + K + + K Sbjct: 5 IGIFDSGVGGLTVAKEIVAQMPDESTVYFGDTARVPYGSKSGDTIIKYSRQIVKFLQTKN 64 Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131 + VIACNTA D L++ P M + GAV AIK T+ G I ++ T T Sbjct: 65 VKAI-VIACNTASAFALDILKTEIDIPIMGVIHAGAVTAIKT----TKVGRIGVVGTEGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I ++ + + +L VE+ ++ ++ I + + E + + Sbjct: 120 ISSGIYKKTIQDINNELEVIQKACPLLVPLVEDGLINDRVTDEIISRYVS----ELKSRH 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHYPL+ F ++ V ++ + A+ + LL + N T+ D +F Sbjct: 176 IDSLVLGCTHYPLLYKTFGRIMGEGVSLVNPAYETAKELKSLLEQKNLCATK---DGGIF 232 >gi|307709763|ref|ZP_07646214.1| glutamate racemase [Streptococcus mitis SK564] gi|301794843|emb|CBW37299.1| glutamate racemase [Streptococcus pneumoniae INV104] gi|307619465|gb|EFN98590.1| glutamate racemase [Streptococcus mitis SK564] gi|332201291|gb|EGJ15362.1| glutamate racemase [Streptococcus pneumoniae GA47901] Length = 264 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|124005254|ref|ZP_01690095.1| glutamate racemase [Microscilla marina ATCC 23134] gi|123989076|gb|EAY28654.1| glutamate racemase [Microscilla marina ATCC 23134] Length = 268 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 24/240 (10%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N+I IFDSGIGGL V + +R L+P+ IY D PYG+ AL+ + + + +L Sbjct: 5 NAIGIFDSGIGGLTVARAVRQLLPQESIIYFGDTAHLPYGDKSTAALQAYAIKICNVLLQ 64 Query: 74 KYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILST 128 + V+ ++ACN+ A+ L+K+ + S M + + I A GLI Sbjct: 65 QNCKVI-LMACNSASVAAYDLVKEYVGSRAKVMNVIEPMINYINDVYAGKNVGLIGT--- 120 Query: 129 PATLRRTYTSNLIHSYVSQ----CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 ++T SN+ V Q + +++ +L +EE ++ I+ EI + Sbjct: 121 ----KQTILSNVYKKKVDQLGAGIDLRSLATPLLVPMIEE-----NFFKNSIRAEIIETY 171 Query: 185 IEKEG-KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQT 242 + +E + D ++L CTHYPLI ++ V+ LD+S+ +A + +L N T++T Sbjct: 172 LSREELQDIDALILGCTHYPLIKASIQKFYNTKVEVLDSSEIVASSLKGMLEMHNLTNKT 231 >gi|46447487|ref|YP_008852.1| glutamate racemase [Candidatus Protochlamydia amoebophila UWE25] gi|46401128|emb|CAF24577.1| probable glutamate racemase [Candidatus Protochlamydia amoebophila UWE25] Length = 249 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 115/236 (48%), Gaps = 19/236 (8%) Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88 +++M L+P+ + +Y+ D PYGN + + + +L+K VL V+ACNTA Sbjct: 1 MREMIRLLPQENLLYLGDTARVPYGNKSAATIIRYSIENAIFLLEKQIKVL-VVACNTAS 59 Query: 89 TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147 L +L+ F + +G + P K AAA T++ I++L T T+ + IH + Sbjct: 60 ALALPKLKQLF-HLPIIGVIEPGAKLAAATTRNKRIAVLGTKGTIESGAYQSAIHQLIPD 118 Query: 148 CHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204 I ++ +L S VEE Y K+ E K +E + D I+L CTHYPL Sbjct: 119 AIIFPIACPLLVSLVEEGFLYHSASKLIIQEYLKNLEKADV-------DTILLGCTHYPL 171 Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL---FLSGKPD 257 + + ++ V +D++ + A+ + LL +HQ + HA+ F++ P+ Sbjct: 172 LKPLIEEIMGSSVTIIDSALTCAQTVKKLL---ESHQLVNSNQHAIHQYFVTDDPE 224 >gi|222054462|ref|YP_002536824.1| glutamate racemase [Geobacter sp. FRC-32] gi|221563751|gb|ACM19723.1| glutamate racemase [Geobacter sp. FRC-32] Length = 283 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 7/215 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I +FDSG+GGL VL+++ ++P+ IY+ D PYG + + + S ++ Sbjct: 4 KAIGVFDSGVGGLTVLKEIMKVLPQEDTIYLGDTARVPYGTKSPETVVRYSRQITSFLVS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + +L V+ACNTA + L+ F S+ +G + P ++AAA T+SG + ++ T T+ Sbjct: 64 RDIKML-VVACNTASAVSLTALKKEF-SIPIVGVIEPGARRAAAVTRSGKVGVIGTAGTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + I + + + EE +I + ++G KE + Sbjct: 122 KSSAYAKAIKRINPGIEVVTRACPLFVPLAEEGWIDNEIARLTAQTYLKGL---KE-ESV 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTHYP++ + ++ V +D+++ A Sbjct: 178 DTLVLGCTHYPILKGIIAEVMGDGVTLVDSAEETA 212 >gi|188994603|ref|YP_001928855.1| glutamate racemase [Porphyromonas gingivalis ATCC 33277] gi|188594283|dbj|BAG33258.1| glutamate racemase [Porphyromonas gingivalis ATCC 33277] Length = 274 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 30/242 (12%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +SI IFDSG GGL +L ++R LMPEY+F+Y+ D+ PYGN + K + + Sbjct: 1 MNSSIGIFDSGYGGLTILSEIRRLMPEYNFVYLGDNARSPYGNRSYEVVYKFTLQAVRKL 60 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTF-PSMAFLGAV-PAIKQAAAYTQSGLIS 124 + P L ++ACNTA T+ + +L + P+ LG + P ++ T++ + Sbjct: 61 FELGCP-LVILACNTASAKALRTIQQRDLPNMEDPTRRVLGIIRPTVEAVDEITRTKHVG 119 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIE 181 +L+T T+ HSY + ++ + V E AC + ++ E Sbjct: 120 VLATQGTVSS-------HSYQLE-----IAKLFPEISVTEEACPMWVPLVETGESDSPGA 167 Query: 182 GCFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 FI K + D I+LACTHYPL+ ++L + + + +A + L Sbjct: 168 DYFIRKHLDSIIAKDDTIDTIILACTHYPLLRPKMKRLLTPTIKLIAQGELVAHSLKDYL 227 Query: 235 PR 236 R Sbjct: 228 SR 229 >gi|297544101|ref|YP_003676403.1| glutamate racemase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841876|gb|ADH60392.1| glutamate racemase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 264 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 113/255 (44%), Gaps = 34/255 (13%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+ Sbjct: 6 IGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61 Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Q V + VIACNT +I +S + + F + AA YT + I +++T T+ Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTV 118 Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVE-EYACGIKIKEDEIKKEIEG 182 ++Y N+ I Y C + L+ + S + E A Sbjct: 119 ESKSYEKNIKIIDKNIKVYQKACPEFVPLIEKGLYNSPIAFETAS--------------N 164 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 C E + D +VL CTHYPL++ V ++ V +D + +A + L R + Sbjct: 165 CLKELRERDIDTLVLGCTHYPLMMEVIEEIVGENVKIVDPAIKLAYDVKDYLLRRDLFNI 224 Query: 243 RVFDDHALFLSGKPD 257 + F+SG D Sbjct: 225 QNIGKTKFFVSGDKD 239 >gi|294792937|ref|ZP_06758083.1| glutamate racemase [Veillonella sp. 6_1_27] gi|294455882|gb|EFG24246.1| glutamate racemase [Veillonella sp. 6_1_27] Length = 272 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 14/213 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 11 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TYLACRIAETL 69 Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ QPV L VIACNT FT++ + S+ +G +K A ++S I I++T AT Sbjct: 70 ER-QPVKLMVIACNT-FTVVALDAVRELVSVPVIGVSQGVKTAINKSKSKTIGIMATVAT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--EDEIKKEIEGCFIEK-E 188 + ++ IH +V+ H V ++ E A I+ +D +E+ ++E Sbjct: 128 V-----NSHIHKHVALEVDHEV--LVWEQPCPELAGLIEQGHLDDYFVREVCKEYLEPLL 180 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 + +V+VL CTH+P + + +L+ + ++D Sbjct: 181 SREIEVVVLGCTHFPFVQPLLEELTSCRIQFID 213 >gi|257784875|ref|YP_003180092.1| glutamate racemase [Atopobium parvulum DSM 20469] gi|257473382|gb|ACV51501.1| glutamate racemase [Atopobium parvulum DSM 20469] Length = 277 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 11/225 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL+ + MP F Y D PYG + +R + +D+ Sbjct: 11 IGVFDSGVGGMSVLKHLVAQMPHETFHYFGDSAFAPYGTKPKEQIAQRSSVIAKKFIDEG 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA DELR+ +P ++ +G PA+K A G + +L+T ATL Sbjct: 71 AKAL-VIACNTATAAAADELRAAYPYLSIVGVEPALKPAVTAYPHGTVIVLATKATLSLQ 129 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NL S+ H I + E + +++ K + G + D + Sbjct: 130 KYHNL----ESRLHPSAKVISIPGEGLVELIESGQTDSEQLHKRLTELLGGYTG-QVDAV 184 Query: 196 VLACTHYPLIVHVFRQLSP--WPVDWLDNSDSIARRARCLLPRIN 238 VL CTHYP I +Q+S V++ D A + + LL + N Sbjct: 185 VLGCTHYPFIK---KQISSVLGNVEFFDGGAGAAHQLKRLLKQAN 226 >gi|227510206|ref|ZP_03940255.1| glutamate racemase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190411|gb|EEI70478.1| glutamate racemase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 264 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 7/212 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL VL+++ ++P +I+V D PYG ++K L +D + K Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRK-LTKRIADYMLKQNVK 59 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNT+ D L+ P + +G + P + A A T + I +++T T+ Sbjct: 60 MFVIACNTSTAASLDYLKKILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVNSGVY 118 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +I S + ++ + + VE G ++ +++ ++ F +K D +VL Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQL-AYFHDKP---IDTLVL 174 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 CTH+P++ + ++ +D S A+ Sbjct: 175 GCTHFPVLETEIKDAVNSGINLIDPGISTAKN 206 >gi|212550932|ref|YP_002309249.1| glutamate racemase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549170|dbj|BAG83838.1| glutamate racemase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 276 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 9/223 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K++ SI IFDSG GG +L+K+R+ +P Y F+Y+ D+ PYG + + + Sbjct: 2 KVKGSIGIFDSGYGGFTILEKIRYRLPRYDFLYLGDNARAPYGTRSFEIVYEFTLQSVRK 61 Query: 71 ILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124 + +K L ++ACNT+ T+ +++L S P LG + P ++ TQ+ I Sbjct: 62 LFEK-GCHLVILACNTSSAKALRTIQQNDLPSIAPQKRLLGVIRPTVEAVGRLTQTRHIG 120 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L T T+ S + + + + S VE + +K+ I Sbjct: 121 VLGTQGTILSGSYSIEMKRLFPDIVVTGEACPMWVSLVENGEYDRPGADYFVKQHINS-- 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 I + D +VL CTHYPL+ +Q P V L +A Sbjct: 179 ILNKDPLIDTLVLGCTHYPLLETKIKQYLPKSVSILSQGKYVA 221 >gi|89889534|ref|ZP_01201045.1| glutamate racemase [Flavobacteria bacterium BBFL7] gi|89517807|gb|EAS20463.1| glutamate racemase [Flavobacteria bacterium BBFL7] Length = 262 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 6/238 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG V +++ L+P + IY+AD PYG + +L ++ L Sbjct: 7 IGFFDSGVGGTSVWKEVVQLLPHENTIYLADSKHAPYGRKSKEEIT-QLCIKNTEYLLSR 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L + CNTA T LR + + F+G PAIK AA + +G + IL+T TL Sbjct: 66 GCKLIAVPCNTATTNSISYLRGHY-DIPFIGIEPAIKPAALNSATGKVGILATKGTL--- 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 TS L + + + I+ + + E K +E++ + D + Sbjct: 122 -TSELFNRTQRAFTKDVNTIEIVGTGIVELIESGKKDSEEMRNLLVSITEPFMISGIDYL 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 VL C+HYP I + ++L P V +D+ ++AR+ +L N ++ H S Sbjct: 181 VLGCSHYPYIKDMLQELLPSRVKIIDSGAAVARQTYHILKEFNLLNDQISSGHHELFS 238 >gi|89895983|ref|YP_519470.1| hypothetical protein DSY3237 [Desulfitobacterium hafniense Y51] gi|89335431|dbj|BAE85026.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 295 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 14/258 (5%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K Q+ I +FDSG+GGL V++++ +P+ IY D PYGN L + S Sbjct: 16 KLAQHVIGMFDSGVGGLTVMKEIVTQLPDVQIIYFGDTARVPYGNRSREELIHFGEEIIS 75 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128 ++++ + V+ACNT+ LR F ++ +G + P K A T +G I +++T Sbjct: 76 FLIEQGAEAI-VVACNTSSANAVPVLREQF-NLPLIGTIEPGAKAAIQATATGNIGLIAT 133 Query: 129 PATLRRTYTSNLIHSYVSQCH----IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 AT+R S+ + +S+ I LV + V G+ E + Sbjct: 134 EATVRSKAYSSAVRRILSKRRGGHAIELVKAQACPLFVPLVEAGLS-HSPEARGIARTYL 192 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-- 242 + + D ++L CTHYP + V +++ + +D + ++ + +L ++ ++ Sbjct: 193 APIQEAQVDALILGCTHYPFLAPVIQEILGEEIILVDPAQAMTEELKEVLKQLEYNRESG 252 Query: 243 ----RVFDDHALFLSGKP 256 + H F+SG P Sbjct: 253 QETHKAPGHHRFFVSGDP 270 >gi|261749317|ref|YP_003257002.1| glutamate racemase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497409|gb|ACX83859.1| glutamate racemase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 271 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 8/186 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSGIGGL++ ++++ MP IY D PYGN ++ M + S + +K Sbjct: 11 IFDSGIGGLLIAKEIKNYMPNECIIYFGDTKNMPYGNKSKEFIRNHSMKIASFLYEKKCK 70 Query: 78 VLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 + VIACN+ + D ++ F + + I + S I I++TPAT+R + Sbjct: 71 AI-VIACNSIVSNALDVIQKNFLKKILIFNVIEPIVKNKVLISSKRIGIMATPATIRSNF 129 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 I Y I +S+ +LA+ +E G + K+ K F + + D ++ Sbjct: 130 YQKNIKRYCPHLDIVQISTPLLATIIEN---GFEKKKINYLKNYLNHF---KSIKIDTLL 183 Query: 197 LACTHY 202 LACTHY Sbjct: 184 LACTHY 189 >gi|326439557|ref|ZP_08214291.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064] Length = 281 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 16/260 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + D G P+G + +R + + ++ Sbjct: 23 IALMDSGIGLLAAAAAVRGLRPDADLVLSQDPDGMPWGPRTPEGVTERALAVAR-AAAEH 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 P ++ACNTA LR+ P++ +G VPAIK AA G I+I +TPAT Sbjct: 82 APDALIVACNTATVHALPALRAALEPAIPVIGTVPAIKPAA--VAGGPIAIWATPATTGS 139 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y +LI + + V LA V+ +DE + + T Sbjct: 140 PYQRDLIGRFAGAVDVAEVPCPGLADAVDH-------ADDEAIDRAVAAAAARTPRDTRA 192 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHY L+ R PV ++ ++A +A + + LSG Sbjct: 193 VVLGCTHYELVAERIRDAIGTPVALHGSAGAVAAQALRRIGAAPAPGATASGTLTVLLSG 252 Query: 255 K----PDIAMRRLMQGFGLK 270 + PD A+ R +G GL+ Sbjct: 253 RASALPDRAL-RYAEGRGLQ 271 >gi|289167204|ref|YP_003445471.1| glutamate racemase, COG0796 [Streptococcus mitis B6] gi|288906769|emb|CBJ21603.1| glutamate racemase, COG0796 [Streptococcus mitis B6] Length = 264 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVESDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|219670410|ref|YP_002460845.1| glutamate racemase [Desulfitobacterium hafniense DCB-2] gi|219540670|gb|ACL22409.1| glutamate racemase [Desulfitobacterium hafniense DCB-2] Length = 295 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 14/258 (5%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K Q+ I +FDSG+GGL V++++ +P+ IY D PYGN L + S Sbjct: 16 KLAQHVIGMFDSGVGGLTVMKEIVTQLPDVQIIYFGDTARVPYGNRSREELIHFGEEIIS 75 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128 ++++ + V+ACNT+ LR F ++ +G + P K A T +G I +++T Sbjct: 76 FLIEQGAEAI-VVACNTSSANAVPVLREQF-NLPLIGTIEPGAKAAIQATATGNIGLIAT 133 Query: 129 PATLRRTYTSNLIHSYVSQCH----IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 AT+R S+ + +S+ I LV + V G+ E + Sbjct: 134 EATVRSKAYSSAVRRILSKRRGGHAIELVKAQACPLFVPLVEAGLS-HSPEARGIARTYL 192 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-- 242 + + D ++L CTHYP + V +++ + +D + ++ + +L ++ ++ Sbjct: 193 APIQEAQVDALILGCTHYPFLAPVIQEILGEEIILVDPAQAMTEELKEVLKQLEYNRESG 252 Query: 243 ----RVFDDHALFLSGKP 256 + H F+SG P Sbjct: 253 QETHKAPGHHRFFVSGDP 270 >gi|297567944|ref|YP_003686914.1| Glutamate racemase [Meiothermus silvanus DSM 9946] gi|296852393|gb|ADH65406.1| Glutamate racemase [Meiothermus silvanus DSM 9946] Length = 234 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 19/200 (9%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL L+++R L P+ ++Y+AD PYG +++R+ + +L+ Sbjct: 2 TVGVFDSGVGGLAALEELRRLRPDLDYLYLADTAWAPYGPLPPERIRERVEQVGGFLLEA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA L L A+ +QAA + ++ +T AT R Sbjct: 62 GAEAL-VVACNTASAWGAGALEGL--RAPVLEAIGPTRQAAGREEG--TAVWTTAATWR- 115 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 S V + ++ + +LA VEE +D + + + G ++E+ T Sbjct: 116 --------SGVYRGVGEVIPTPLLAPLVEEGHL-----DDRVAEAVVGAYLERLPGGTRR 162 Query: 195 IVLACTHYPLIVHVFRQLSP 214 +VL CTHY + + +L+P Sbjct: 163 LVLGCTHYSFLRPLLSRLAP 182 >gi|313675673|ref|YP_004053669.1| glutamate racemase [Marivirga tractuosa DSM 4126] gi|312942371|gb|ADR21561.1| glutamate racemase [Marivirga tractuosa DSM 4126] Length = 270 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 17/226 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL V K++ LMP +Y D PYG+ A++ + + +D+L + Sbjct: 9 IGIFDSGIGGLTVAHKVKELMPNESMVYFGDIAHLPYGDKSAAAIQAYSIKV-TDVLLQQ 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV--PAIKQAAAYTQSGLISILSTPATLR 133 L +IACN+A + + +R S A + V P ++ + + + ++ T + Sbjct: 68 GCKLILIACNSASSAAFELVREYVGSKAKVFNVIDPVVEHVSQHYNKQKVGLIGT----K 123 Query: 134 RTYTSNLIHSYVSQCH----IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 +T SN S + Q + + +++ +L +EE E+ I +I ++ E Sbjct: 124 QTVNSNAYESRLKQLNPDIELKSLATPLLVPMIEE-----GFFENRISHDIIEAYLHDEA 178 Query: 190 -KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + ++L CTHYPLI + + VD LD++ +A+R + L Sbjct: 179 LEEIEALILGCTHYPLIKNEIDKFYGGKVDILDSATIVAKRLQQFL 224 >gi|223038331|ref|ZP_03608625.1| glutamate racemase [Campylobacter rectus RM3267] gi|222880188|gb|EEF15275.1| glutamate racemase [Campylobacter rectus RM3267] Length = 519 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 104/225 (46%), Gaps = 10/225 (4%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 N +K L+ I FDSGIGGL VL + F+Y AD+ PYG + A RL Sbjct: 8 NLTLDKDLK--IAFFDSGIGGLSVLAEALGRFSGAEFLYFADEDHVPYGT-KSRAEIVRL 64 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 L + VIACNTA + ELRS F S+ +G PA+K AA S Sbjct: 65 SLDAVGFLVSHGAEAVVIACNTATSAAISELRSAF-SVPIIGMEPAVKLAADRFGSRPTL 123 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +++TP T+ + L+ +C I S+ L R+ E+A ++ ++ ++G Sbjct: 124 LIATPLTIAGEKLARLVGRL--ECEIW---SLPL-PRLVEFAQDLEFDSPAVRTYLQGEL 177 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + E R +VL CTH+ V R++ P V +D D R Sbjct: 178 GKFELARLGSLVLGCTHFNYFKDVLREILPPHVRIIDGIDGTLNR 222 >gi|167043360|gb|ABZ08063.1| putative Asp/Glu/hydantoin racemase [uncultured marine crenarchaeote HF4000_ANIW141O9] Length = 253 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 20/259 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG G L +++ ++ + + +Y AD FPYG L K + + + +K+ Sbjct: 4 IAVFDSGFGSLSIIKPIQQAI-KSDIVYFADQKNFPYGKKSKSELTKIITKTVNMLEEKF 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P L VI NT L++ ++ + +P IK+AA + +G ++IL+T A +R Sbjct: 63 EPDLIVIGSNTPSLLVEINKKN------IVKVLPPIKKAAKISMTGNVAILATLALIRSK 116 Query: 136 YTSNLIHSYVSQCHIHL--VSSMILASRVEE--YACGIKIKEDEIKKEIEGCFIEKEGKR 191 S + H++L + + L VEE + K+ E ++K + F++ Sbjct: 117 KLSEYVRKSRLPKHVNLKRIDATQLVRLVEEGKFLDNRKLCEKTVRKVLSKPFLKSN--- 173 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV +L+ TH P ++ ++ P + ++D ++ IA++ R +I + + +F Sbjct: 174 VDVAILSSTHLPFLLPFLKKQFPN-ITFVDPANEIAQKVR----KIVAKKPSKTNTMKIF 228 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S P R L Q G+K Sbjct: 229 TSSDPKKFQRYLWQ-IGIK 246 >gi|325263159|ref|ZP_08129894.1| glutamate racemase [Clostridium sp. D5] gi|324031552|gb|EGB92832.1| glutamate racemase [Clostridium sp. D5] Length = 277 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 22/256 (8%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E K I +FDSG+GGL V+++M +P + +Y D PYG+ + + + Sbjct: 5 AECKKTAPIGVFDSGVGGLTVVREMIRQLPNENIVYFGDTARVPYGSKSQNTIIR----- 59 Query: 68 FSDILDKY----QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122 FS+ + ++ + VIACNTA L D +R F + LG V P + A TQ+ Sbjct: 60 FSEQIIRFLKKKKVKAIVIACNTASALALDAVRDEF-EVPILGVVIPGARAAVEATQNLK 118 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + ++ T AT++ + +IH + + + + VEE KE ++ +EI Sbjct: 119 VGVVGTDATVQSGMYTKIIHGMNPEITVIEKACPLFVPLVEE-----GFKEHKVTQEIID 173 Query: 183 CFIEKEGKRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---I 237 ++E KRTD+ ++L CTHYPL+ R + ++ + A + LL + Sbjct: 174 FYLESI-KRTDIDAMILGCTHYPLLRSKIRAYMGDGIQIVNPAYETAMDLKKLLKEQDMV 232 Query: 238 NTHQTRVFDDHALFLS 253 N Q + + F+S Sbjct: 233 NDGQKAPYSRYEFFVS 248 >gi|189462010|ref|ZP_03010795.1| hypothetical protein BACCOP_02682 [Bacteroides coprocola DSM 17136] gi|189431224|gb|EDV00209.1| hypothetical protein BACCOP_02682 [Bacteroides coprocola DSM 17136] Length = 276 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 9/234 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R L+P+Y +IY+ D+ PYG + + + + D Sbjct: 8 IGVFDSGYGGLTILDKIRELLPQYDYIYLGDNARTPYGTRSFEVVYEFTLQAVRKLFDLG 67 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 P L ++ACNTA ++ +++L + LG + P + T S + +L+T Sbjct: 68 CP-LVILACNTASAKALRSIQENDLPHIDATRRVLGVIRPTAECIGDITVSRHVGLLATA 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ +H + V+ + VE D +E +E++ Sbjct: 127 GTVKSQSYPIELHKLFPDIQLTGVACPLWVPLVENNEFN-SPGADYFVQEYINQLLEQDP 185 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 K D I+L CTHYPL++ RQ +P + + + +A + L R + +TR Sbjct: 186 K-IDTIILGCTHYPLLIEKIRQFTPPHIRLVAQGEYVAASLKDYLRRHSEIRTR 238 >gi|291288784|ref|YP_003505600.1| glutamate racemase [Denitrovibrio acetiphilus DSM 12809] gi|290885944|gb|ADD69644.1| glutamate racemase [Denitrovibrio acetiphilus DSM 12809] Length = 256 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 7/230 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I IFDSG+GGL V + + PE Y+ D PYG+ + + ++D Sbjct: 2 AIGIFDSGVGGLTVYKTISEHFPELDMHYLGDTARVPYGSRSQETVINYSLQCAGFLVDN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + ++ACNTA + D +R F + +G V P A T++ I ++ T AT+R Sbjct: 62 FDIDTIIVACNTASSYAIDHIRKKF-KVNVIGVVEPGSYSALQVTENNKIGVIGTRATVR 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + S I + + VEE I + ++ ++ D Sbjct: 121 SGSYVKALKAIRSDVEITQTACPLFVPIVEEMLVDTDIADMVVRHYLDNMMTTG----AD 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 ++L CTHYPL+ +V + P + +D+S++I L +N H R Sbjct: 177 TLILGCTHYPLLKNVIAKFYP-DIKIVDSSEAIIDCINELKLNVNQHSKR 225 >gi|228987734|ref|ZP_04147845.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772008|gb|EEM20463.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 269 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 118/251 (47%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K+TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + + Sbjct: 174 KKTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 233 -SDHLFLTTGK 242 >gi|306834137|ref|ZP_07467257.1| glutamate racemase [Streptococcus bovis ATCC 700338] gi|304423710|gb|EFM26856.1| glutamate racemase [Streptococcus bovis ATCC 700338] Length = 269 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 18/255 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + ++ V ACNTA + + ++ + LG + P A T++G Sbjct: 53 YTWELVNFLLTQNVKMI-VFACNTATAVAWEAVKEKL-DIPVLGVILPGSSAAIKSTRNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I S Q ++ +S A VE ++ KK + Sbjct: 111 KIGVIGTPMTIKSDIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSG 254 +R DD HA + + Sbjct: 226 SRTQDDVTHAFYTTA 240 >gi|255009918|ref|ZP_05282044.1| putative glutamate racemase [Bacteroides fragilis 3_1_12] gi|313147706|ref|ZP_07809899.1| glutamate racemase [Bacteroides fragilis 3_1_12] gi|313136473|gb|EFR53833.1| glutamate racemase [Bacteroides fragilis 3_1_12] Length = 280 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 9/218 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILSKIREALPDYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA T+ + L PS LG + P ++ + TQ+ + +L+T Sbjct: 71 GCHLVILACNTASAKALRTIQMNNLPDIDPSRRVLGVIRPTVECIGSITQTRHVGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ IH + + + VE + + I+K I + K+G Sbjct: 131 GTIKSESYPLEIHKLFPDIKVSGEACPMWVPLVENNEANGEGTDFFIRKYIHN-LLAKDG 189 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + D I+L CTHYPL++ +Q P + + + +A Sbjct: 190 Q-IDTIILGCTHYPLLLPKIQQFVPQSMKVVAQGEYVA 226 >gi|307707605|ref|ZP_07644086.1| glutamate racemase [Streptococcus mitis NCTC 12261] gi|307616318|gb|EFN95510.1| glutamate racemase [Streptococcus mitis NCTC 12261] Length = 264 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVHSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|78187589|ref|YP_375632.1| glutamate racemase [Chlorobium luteolum DSM 273] gi|78167491|gb|ABB24589.1| glutamate racemase [Chlorobium luteolum DSM 273] Length = 271 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 8/224 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I IFDSG+GGL V++ +R +P +Y D PYG + +R + L Sbjct: 8 ESPIGIFDSGVGGLTVVKAVRHALPGERILYFGDTARVPYGP-KSQVTIRRYAEDDTQAL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 ++QP + ++ACNT L D + + LG + A A T++ I ++ T AT Sbjct: 67 LRHQPKMIIVACNTVSALALDVVEHAADPLPVLGVLEAGATLAVEVTKNRRIGVIGTQAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF-IEKEGK 190 + + I+ Q + + + EE + DE + I + + G+ Sbjct: 127 VCSNAYAYAINRLDPQIEVFSRACPLFVPLAEE-----GMVNDEATRLIARQYLLPLVGE 181 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYP++ V + V +D+++++A R +L Sbjct: 182 GIDTLVLGCTHYPILRRVIEETVGPAVRIIDSAEAVATRTETML 225 >gi|300932724|ref|ZP_07147980.1| glutamate racemase [Corynebacterium resistens DSM 45100] Length = 270 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 6/213 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + L+P + +Y+ D PYG+ + A ++L +D L + Sbjct: 7 IGIFDSGVGGLTVARAVVDLLPRENIVYIGDTANSPYGD-KPLAQVRQLSIAIADELVER 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACN+A + + R +P +PA+++A A T++G + ++ T AT+ Sbjct: 66 GCKMIVVACNSASSAFIRDARERYPVPVIEVILPAVRRAVAATRNGKVGVIGTHATVTSG 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L + + ++ V++ V GI +I E + D + Sbjct: 126 SYQDL---FAASPNVE-VTAQACPQFVPFVERGITTGR-QIVGLAENYLEPLKDAGVDTV 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 VL CTHYPL+ V + + V ++++D A+ Sbjct: 181 VLGCTHYPLLAGVVQLVMGDDVTLVNSADETAK 213 >gi|91202612|emb|CAJ72251.1| similar to glutamate racemase [Candidatus Kuenenia stuttgartiensis] Length = 266 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 9/229 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG+G L +++++R +P ++IY+AD FPYG L + + Sbjct: 3 IDDPIAIFDSGVGSLSIIKEIRNSLPGENYIYLADKKHFPYGKKTHDELLLIIRNTIEYL 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + P L V+A NT + EL+ ++ +G P + +A + +++G I+IL+T T Sbjct: 63 SKNFTPKLIVLASNTPSIQVLHELKKG--AVDVIGVFPPVNEAVSVSKTGHIAILATQNT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLV----SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 + + IHS ++ S M+ ++ K K I E E +E+ Sbjct: 121 ILSSELDEYIHSQEMPASAKIIKWNASRMVDLVETGDFLSN-KEKSLRIISE-ELSLLEE 178 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 D I L+ TH P + F L P + +D + +A + + LL R Sbjct: 179 TDNMVDTITLSSTHLPFLNEYFTLLRPC-LHLIDPAKIVAGKVKSLLER 226 >gi|293376564|ref|ZP_06622792.1| glutamate racemase [Turicibacter sanguinis PC909] gi|325839373|ref|ZP_08166812.1| glutamate racemase [Turicibacter sp. HGF1] gi|292644790|gb|EFF62872.1| glutamate racemase [Turicibacter sanguinis PC909] gi|325490493|gb|EGC92809.1| glutamate racemase [Turicibacter sp. HGF1] Length = 257 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 8/210 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGGL VL + +P + ++Y AD + PYG ++ + ++ K Sbjct: 3 IGFFDSGIGGLTVLSEALKRLPHHDYLYYADTLHAPYGPKPKEEVRGYIFEAIEFLVRKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATLR 133 ++ VIACNTA ++ ++LR + + +G PA+K A + Q +L +TP TL+ Sbjct: 63 ADII-VIACNTATSIAVNDLREKY-QIPIIGMEPAVKPAIEWVQESGKRVLVTATPLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +LI + Q H V+ ++ + +A + + ++ ++ + Sbjct: 121 EEKLHHLIER-LDQSH---VTDLLPLPDLVRFAESFDFSPETVVPYLKKQLVDYQISDYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 IVL CTH+PL F+++ ++ +D S Sbjct: 177 AIVLGCTHFPLFASSFKEVFEPGIELIDGS 206 >gi|237715314|ref|ZP_04545795.1| glutamate racemase [Bacteroides sp. D1] gi|262405155|ref|ZP_06081705.1| glutamate racemase [Bacteroides sp. 2_1_22] gi|294643545|ref|ZP_06721351.1| glutamate racemase [Bacteroides ovatus SD CC 2a] gi|294807052|ref|ZP_06765871.1| glutamate racemase [Bacteroides xylanisolvens SD CC 1b] gi|229444623|gb|EEO50414.1| glutamate racemase [Bacteroides sp. D1] gi|262356030|gb|EEZ05120.1| glutamate racemase [Bacteroides sp. 2_1_22] gi|292641120|gb|EFF59332.1| glutamate racemase [Bacteroides ovatus SD CC 2a] gi|294445751|gb|EFG14399.1| glutamate racemase [Bacteroides xylanisolvens SD CC 1b] Length = 280 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ IH + + + + S VE + + I+K I+ + Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLL--SKD 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + D ++L CTH+P+++ RQ P + + + +A + L R Sbjct: 189 PQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKR 235 >gi|308177066|ref|YP_003916472.1| glutamate racemase [Arthrobacter arilaitensis Re117] gi|307744529|emb|CBT75501.1| glutamate racemase [Arthrobacter arilaitensis Re117] Length = 307 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 16/220 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +YV D PYG ++ + + +++D Sbjct: 19 IGIFDSGVGGLTVARAIIDQLPGESLVYVGDTANSPYGPLPIAQVRANALGVMDELVDGG 78 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L VIACN+A + + R + + + V PA+++A A T++G I I+ T AT Sbjct: 79 VKLL-VIACNSASAAVLRDARERYTARYGIPVVEVIQPAVRRAVAGTKNGKIGIIGTQAT 137 Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKE 188 + R Y ++ + ++ VS++ VE GI + EI +E + Sbjct: 138 VGSRAYED----AFAAAPNLQ-VSTVACPRFVEFVESGITAGAELLEIAQEY---LAPLQ 189 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + D +VL CTHYPL+ V + V + +++ A+ Sbjct: 190 AAQVDTLVLGCTHYPLLTGVISYVMGDSVTLVSSAEETAK 229 >gi|304384311|ref|ZP_07366722.1| glutamate racemase [Prevotella marshii DSM 16973] gi|304334627|gb|EFM00909.1| glutamate racemase [Prevotella marshii DSM 16973] Length = 278 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 19/226 (8%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFS 69 +I +FDSG GGL +L ++R +P Y +IY+ D+ PYG+ + ++ +M LF+ Sbjct: 8 GAIGVFDSGYGGLTILHEIRQQLPMYDYIYIGDNARAPYGSRSFDVVYEFTRQAVMKLFA 67 Query: 70 DILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123 L ++ACNTA T+ + +L +T+PS LG + P + T + + Sbjct: 68 QGCR-----LVILACNTASAKALRTIQQHDLPTTYPSRRVLGVIRPTAEVIGDITTTRHV 122 Query: 124 SILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I++TP T++ R+Y + Y + + + A+ VE K + +KK ++ Sbjct: 123 GIVATPGTIKSRSYEMEIGKLY-PDIIVTGQACPLWAAIVEANEADSKGADYFVKKRLDE 181 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + + D ++L CTHYPL++ R+ P V + +AR Sbjct: 182 --LMSKDPHIDSLILGCTHYPLLLSKIRKHLPASVHIIPQGCYVAR 225 >gi|210623229|ref|ZP_03293668.1| hypothetical protein CLOHIR_01618 [Clostridium hiranonis DSM 13275] gi|210153766|gb|EEA84772.1| hypothetical protein CLOHIR_01618 [Clostridium hiranonis DSM 13275] Length = 267 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 9/233 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL++++ ++P +Y D PYG + K + +L Sbjct: 3 KRGIGVFDSGLGGLTVLKEIKKILPNEDLVYFGDTARVPYGPRSKETIMKYTFQAINFLL 62 Query: 73 DKYQPVLSVIACNTAF--TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 K + VIACNTA +L++ + + P + + A + AAA T++G + I+ T Sbjct: 63 TKDVKAI-VIACNTATARSLVEAQEKYDIPIIGVIEA--GARTAAASTKNGKVGIIGTEG 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I + ++ + + VEE ++ K+ ++ E E K Sbjct: 120 TIKSKAYNAEIKKIDKRIKVYGKACSLFVPIVEEGWANTEVARLTAKEYLK----ELEEK 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 D IVL CTHYPL+ + V ++ + A + +L N T+ Sbjct: 176 DVDSIVLGCTHYPLLKRTIGEEVGMEVKLVNPARETAIDLKNILIEKNLLNTK 228 >gi|319938692|ref|ZP_08013056.1| glutamate racemase [Streptococcus anginosus 1_2_62CV] gi|319811742|gb|EFW08008.1| glutamate racemase [Streptococcus anginosus 1_2_62CV] Length = 264 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPADQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K ++ V+ACNTA ++ +E++ + LG + P A +Q G Sbjct: 53 YTWQLVQFLLTKNVKMI-VLACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKASQHG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I I+ TP T++ I + + + +S VE I KK + Sbjct: 111 KIGIIGTPMTIQSDIYRQKIERLLPEVEVTSLSCPKFVPLVESNELSSSIT----KKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + +GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 167 ESLMPLKGK-VDTLVLGCTHYPLLKPIIQNVMGPTVKLIDSGAECVRDISVLLNYFEINH 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|295397445|ref|ZP_06807532.1| glutamate racemase [Aerococcus viridans ATCC 11563] gi|294974346|gb|EFG50086.1| glutamate racemase [Aerococcus viridans ATCC 11563] Length = 287 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 105/238 (44%), Gaps = 29/238 (12%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWEDHALKKRLMF 66 E + I DSG+GGL V+++ +P IY+ D+ PYG + E+ A M Sbjct: 7 EVNMNRPIGFLDSGVGGLTVVKEAMRQLPNESIIYIGDNARCPYGPRSVEEIAAFTNQMV 66 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 F +L K +L VIACNTA + DE++ S+ +G + P + A YT++G I + Sbjct: 67 DF--LLTKDIKLL-VIACNTATAVALDEIKQRV-SIPVIGVIQPGARAANKYTKNGKIGV 122 Query: 126 LSTPATLRR-TYTSNLIH--------SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 L T T++ Y NL+ S + LV S ++YA + Sbjct: 123 LGTEGTIKSGMYLENLLQKNKDLNTTSLACPAFVPLVES-------QQYATPLA------ 169 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 KK I + K D ++L CTHYPL+ ++ V +D+ LL Sbjct: 170 KKVIAETLAPIKNKGLDTVILGCTHYPLLRDTIQKTLGHTVKLIDSGQETISDVSILL 227 >gi|226311374|ref|YP_002771268.1| glutamate racemase [Brevibacillus brevis NBRC 100599] gi|226094322|dbj|BAH42764.1| probable glutamate racemase [Brevibacillus brevis NBRC 100599] Length = 270 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 7/217 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I + DSG+GGL V +++ +PE +YV D+ PYG+ ++ F D + Sbjct: 4 ERAIAVIDSGVGGLTVAKEVMRQLPEERIVYVGDNARCPYGSKSPEEIRT-YSFQMIDYV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + VIACNTA ++ +E P + +G + P + A T++G I ++ T T Sbjct: 63 MRTPLKALVIACNTATAVVLEEAIGDLP-LPVIGVIEPGARAAVQVTKNGRIGVIGTETT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + ++ ++ VE + + + + KE F+ ++ Sbjct: 122 IRTKAYERALLRIQPDLYVAGMACPAFVPLVESHMANTE-EARRVVKETLAPFLHED--- 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYPL+ + ++ V +++++ AR Sbjct: 178 LDTLILGCTHYPLLAPIISEVMGDRVRLINSAEETAR 214 >gi|256750841|ref|ZP_05491725.1| glutamate racemase [Thermoanaerobacter ethanolicus CCSD1] gi|256750176|gb|EEU63196.1| glutamate racemase [Thermoanaerobacter ethanolicus CCSD1] Length = 264 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 32/254 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+ Sbjct: 6 IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61 Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Q V + VIACNT +I +S + + F + A YT + I +++T T+ Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAVLYTINKKIGVIATTRTV 118 Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++Y N+ I Y C + L+ + S + Y K C Sbjct: 119 ESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPI-AYETASK------------C 165 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 E + K D +VL CTHYPL+ V ++ V +D + +A + L + + + Sbjct: 166 LKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQ 225 Query: 244 VFDDHALFLSGKPD 257 + F+SG D Sbjct: 226 IRGKAEFFVSGDKD 239 >gi|148984333|ref|ZP_01817628.1| glutamate racemase [Streptococcus pneumoniae SP3-BS71] gi|149003922|ref|ZP_01828736.1| glutamate racemase [Streptococcus pneumoniae SP14-BS69] gi|147758062|gb|EDK65067.1| glutamate racemase [Streptococcus pneumoniae SP14-BS69] gi|147923622|gb|EDK74735.1| glutamate racemase [Streptococcus pneumoniae SP3-BS71] gi|301800660|emb|CBW33304.1| glutamate racemase [Streptococcus pneumoniae OXC141] Length = 264 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG + + Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIGE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|166368300|ref|YP_001660573.1| glutamate racemase [Microcystis aeruginosa NIES-843] gi|226722987|sp|B0JGW5|MURI_MICAN RecName: Full=Glutamate racemase gi|166090673|dbj|BAG05381.1| glutamate racemase [Microcystis aeruginosa NIES-843] Length = 283 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 20/263 (7%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I +FDSG+GGL VL+++ +P+ +Y AD PYG + + ++ + + + + Sbjct: 7 SPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGTRSKGEIIEFVLEILTWMSE 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + ++ ++ACNT+ L +E+++ F + LG + P K A + I ++STPAT Sbjct: 67 RRVKMV-IMACNTSSALALEEVQAEFKDLPILGVILPGAK--TAVQKGKRIGVISTPATA 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVS-----SMILASRV-EEYACGIKIKEDEIKKEIEGCFIE 186 + I + + +I A+R+ + Y + ++ ++ E Sbjct: 124 KSNAYKQAIQEIDPTAQVWQIPCPEFVPLIEANRIFDPYTTQVA------REYLQPLLAE 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D +V CTHY + V R+L P V +D + S+ R A L + Sbjct: 178 N----IDTLVYGCTHYRHLSPVLRRLLPSSVRLVDPAASVVRAAEKELELLGLKNPETPL 233 Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269 +SG PD R Q G Sbjct: 234 PTNFAVSGDPDTFARLSRQWLGF 256 >gi|34540498|ref|NP_904977.1| glutamate racemase [Porphyromonas gingivalis W83] gi|34396811|gb|AAQ65876.1| glutamate racemase [Porphyromonas gingivalis W83] Length = 274 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 30/242 (12%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + SI IFDSG GGL +L ++R LMPEY+F+Y+ D+ PYGN + K + + Sbjct: 1 MNPSIGIFDSGYGGLTILSEIRKLMPEYNFVYLGDNARSPYGNRSYEVVYKFTLQAVRKL 60 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTF-PSMAFLGAV-PAIKQAAAYTQSGLIS 124 + P L ++ACNTA T+ + +L + P+ LG + P ++ T++ + Sbjct: 61 FELGCP-LVILACNTASAKALRTIQQRDLPNMEDPTRRVLGIIRPTVEAVDEITRTKHVG 119 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIE 181 +L+T T+ HSY + ++ + V E AC + ++ E Sbjct: 120 VLATQGTVSS-------HSYQLE-----IAKLFPEISVTEEACPMWVPLVETGESDSPGA 167 Query: 182 GCFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 FI K + D I+LACTHYPL+ ++L + + + +A + L Sbjct: 168 DYFIRKHLDSIIAKDDTIDTIILACTHYPLLRPKMKRLLTPTIKLIAQGELVAHSLKDYL 227 Query: 235 PR 236 R Sbjct: 228 SR 229 >gi|22298004|ref|NP_681251.1| glutamate racemase [Thermosynechococcus elongatus BP-1] gi|22294182|dbj|BAC08013.1| glutamate racemase [Thermosynechococcus elongatus BP-1] Length = 297 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 29/219 (13%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I +FDSG+GGL VLQ ++ +P+ F+Y D PYG ++R S+IL Sbjct: 15 GAIGVFDSGVGGLTVLQALQSRLPQESFLYFGDTARLPYGT------RRR-----SEILQ 63 Query: 74 KYQPVL----------SVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGL 122 + +L +V+ACNT+ L ++RS F LG VP K A T Sbjct: 64 YVREILRWMHAQGVKMAVMACNTSSALALTQVRSEF-CFPILGLIVPTAK--IAVTLGKR 120 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +++TPAT++ + + + I V+ VE ++ D + + + Sbjct: 121 IGVIATPATVKSGAYARALQEFSPTVAIAQVACPEFVPLVESNC----LEGDRVHRIVRQ 176 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 DV++ CTHYP + HV Q P V LD Sbjct: 177 TLSPLVEFDPDVLIYGCTHYPHLRHVIEQYVPTTVHHLD 215 >gi|115373706|ref|ZP_01461000.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1] gi|310823643|ref|YP_003956001.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1] gi|115369253|gb|EAU68194.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1] gi|309396715|gb|ADO74174.1| Glutamate racemase [Stigmatella aurantiaca DW4/3-1] Length = 270 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 13/225 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I +FDSG+GGL VL+ + +P + +Y+ D PYG + + + +L+ Sbjct: 7 SPIGVFDSGVGGLTVLKALMERLPHENTLYLGDTARVPYGTKSGEVVTRYSLKNAQFLLE 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 K +L V+ACNTA + L + S+ LG + P + A T+ G + ++ TP T+ Sbjct: 67 KGIKLL-VVACNTASAVALPALSAAL-SVPVLGVIAPGAQAALRRTRGGGVGVIGTPGTI 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE---KEG 189 R + + + + + + EE + E+ + ++ +EG Sbjct: 125 RSGAYQRELQAADPKVQVKARACPLFVPLAEE-----GWTQGEVPALVAREYLADFAREG 179 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYPL+ + Q+ V +D++++ A LL Sbjct: 180 --VDTLVLGCTHYPLLKDIIAQVVGPRVSLVDSAEATAEAVALLL 222 >gi|304403816|ref|ZP_07385478.1| glutamate racemase [Paenibacillus curdlanolyticus YK9] gi|304346794|gb|EFM12626.1| glutamate racemase [Paenibacillus curdlanolyticus YK9] Length = 269 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 11/226 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q I I DSG+GGL V +++ +P +Y D PYG + R D Sbjct: 1 MQQPIAILDSGVGGLTVAKEVMRQLPREKIVYFGDTARTPYGPRPAGEV-VRFTKEIVDY 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y P + V+ACNTA D+L+ S+ +G + P + A + T +G+I ++ T Sbjct: 60 LIQYNPKMIVVACNTATAFALDDLKEMV-SVPVVGVIDPGARAALSRTNTGVIGVIGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+R + + HIH++S A VE+ + E ++ Sbjct: 119 TVRSGAYEHALKQLSP--HIHVISQACPAFVPLVEQG----NFRSTETFHTVQQALGYLR 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYP + ++ V + +++ R R +L Sbjct: 173 EYPLDCMILGCTHYPFLSESISEVMGPEVALISSAEETVREIRAIL 218 >gi|294791442|ref|ZP_06756599.1| glutamate racemase [Scardovia inopinata F0304] gi|294457913|gb|EFG26267.1| glutamate racemase [Scardovia inopinata F0304] Length = 263 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 9/222 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V++++R +P ++ D PYG +K+ + +L + Sbjct: 6 IGVFDSGMGGISVVRQIRQDLPHEDILFYGDSAHAPYGTKPTEQVKELSFAVTRHLLSRG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133 + VIACNTA + +LRS+ S+ +G PA+K A + + +L+T TLR Sbjct: 66 VKAI-VIACNTATSAAAPDLRSSL-SLPVIGMEPALKVACDRGEGKPQNVLVLATSLTLR 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKRT 192 + L+ IH + L S VE K+++ ++ K I + Sbjct: 124 EKKFARLVEQVRGNNTIHTQACPDLVSLVESG----KVEDRDLAIKTITSYLKPYDLNSL 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+ + FRQ+ P V +D + + R +L Sbjct: 180 DSVVLGCTHFIFYRNYFRQILPDSVAIIDGNAGTSHHVRTIL 221 >gi|116611238|gb|ABK03962.1| glutamate racemase [Arthrobacter sp. FB24] Length = 312 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 14/219 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +YV D PYG ++ + + +++D Sbjct: 6 IGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDELVDSG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L+ IACN+A + + R + + + + PA+++A A T+SG + ++ T AT Sbjct: 66 VKLLT-IACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVAATRSGRVGVIGTSAT 124 Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189 + R Y + HI V+ S VE GI + + E ++E Sbjct: 125 IGSRAYEDTF--AAAPDLHITSVACPAFVSYVE---AGITTGPELLAVARE--YLEPLRT 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYPL+ V + V + +++ A+ Sbjct: 178 AGVDTVVLGCTHYPLLTGVISYVMGEDVTLVSSAEETAK 216 >gi|326390909|ref|ZP_08212460.1| glutamate racemase [Thermoanaerobacter ethanolicus JW 200] gi|325993057|gb|EGD51498.1| glutamate racemase [Thermoanaerobacter ethanolicus JW 200] Length = 264 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 32/254 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+ Sbjct: 6 IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61 Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Q V + VIACNT +I +S + + F + AA YT + I ++T T+ Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGAIATTRTV 118 Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++Y N+ I Y C + L+ + S + Y K C Sbjct: 119 ESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPI-AYETANK------------C 165 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 E + K D +VL CTHYPL+ V ++ V +D + +A + L + + + Sbjct: 166 LKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQ 225 Query: 244 VFDDHALFLSGKPD 257 + F+SG D Sbjct: 226 IRGKAEFFVSGDKD 239 >gi|313892611|ref|ZP_07826198.1| putative glutamate racemase [Dialister microaerophilus UPII 345-E] gi|313119008|gb|EFR42213.1| putative glutamate racemase [Dialister microaerophilus UPII 345-E] Length = 257 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 96/215 (44%), Gaps = 29/215 (13%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK- 61 +DN P I I DSG+GGL V + +R PE I++ D PYG H + Sbjct: 1 MDNRP--------IGIMDSGVGGLTVARVLRQKYPEESIIFIGDTANNPYGERTSHEINV 52 Query: 62 ---KRLMFLFSDILDKYQPVLSVIACNT-AFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 K FL S + + +IACNT F + K+ P +P + A Sbjct: 53 LAGKMKKFLISKNVK-----MIIIACNTITFNVQKNFYDEKIPIEGMSLDLPHFENA--- 104 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 G I++ +TPAT+ N I I + LA +EE KI E +K Sbjct: 105 ---GSITVFATPATINLHIHKNKIKEKFPNSKIEEMPCEGLAHAIEENNSREKITEI-LK 160 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212 K IE +++ TD+ + ACTHYPL+ VF+++ Sbjct: 161 KIIE----KRKISPTDIGIFACTHYPLVEDVFKKI 191 >gi|72381894|ref|YP_291249.1| glutamate racemase [Prochlorococcus marinus str. NATL2A] gi|123621455|sp|Q46LT2|MURI_PROMT RecName: Full=Glutamate racemase gi|72001744|gb|AAZ57546.1| glutamate racemase [Prochlorococcus marinus str. NATL2A] Length = 265 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 15/222 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGG VL+K+ L P FIY+AD PYG + +KK + S +Y Sbjct: 3 IGLFDSGIGGFTVLKKVIKLCPNNSFIYLADTARLPYGIKTTNEIKKIAEEISSWF--RY 60 Query: 76 QPVLS-VIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Q + + ++ACNT + D L+ P +G+ AA+ Q + +L+TP+T+ Sbjct: 61 QKIDAFLVACNTTNAIALDILKKNLDIPVFDLIGS------AASTIQESRVGVLATPSTV 114 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +N I + + + +E I D+I G ++ Sbjct: 115 KTKAYTNAILEFKPKTFVIEQPCPAFVPMIEMD----NINSDDITDVATGYLQPLLKQKI 170 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++L C+HYPLI R++ P V +D +++++ + + + Sbjct: 171 HSLILGCSHYPLIAPSLRKVLPSSVKLIDPAEALSFKLKLFI 212 >gi|17227590|ref|NP_484138.1| glutamate racemase [Nostoc sp. PCC 7120] gi|11386941|sp|Q9L870|MURI_ANASP RecName: Full=Glutamate racemase gi|6969397|gb|AAF33755.1|AF216288_2 putative glutamate racemase [Nostoc sp. PCC 7120] gi|17135072|dbj|BAB77618.1| glutamate racemase [Nostoc sp. PCC 7120] Length = 292 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 17/222 (7%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 + ++ + I +FDSG+GGL VL+++ +P IY D PYG + + Sbjct: 13 GFSAQEPQRAPIGVFDSGVGGLTVLRQIYRQLPNESVIYFGDTARLPYGIRS----QAEI 68 Query: 65 MFLFSDILDKYQPV---LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 + DILD Q + V+ACNT+ L D +R + LG + P K AA Q Sbjct: 69 LTFVRDILDWMQQQHVKMVVMACNTSSALALDIVREEY-DFPILGVILPGAK--AAVQQG 125 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++STPAT + I + V +E+ +D E+ Sbjct: 126 KRIGVISTPATAKSNAYRQAIWEIDPNVEVWQVGCPEFVPLIEQNRI-----QDPYTTEV 180 Query: 181 EGCFIEKEGKR-TDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 ++E ++ D +V CTHYPL+ V R L P V +D Sbjct: 181 ARAYLEPLIQQDIDTLVYGCTHYPLLAPVLRSLLPPQVKIID 222 >gi|300859076|ref|YP_003784059.1| glutamate racemase [Corynebacterium pseudotuberculosis FRC41] gi|300686530|gb|ADK29452.1| Glutamate racemase [Corynebacterium pseudotuberculosis FRC41] Length = 297 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 24/204 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ IY+ D PYG+ +++ M + +++ + Sbjct: 36 IGIFDSGVGGLTVARAIMEQLPQESVIYIGDTANSPYGSKPIAQVRELSMRIGDELVARG 95 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 ++ VIACNTA + +LR + S+ +G + PA+++A A T++G I +L T T+ Sbjct: 96 CKMI-VIACNTATSAALRDLRERY-SIPVVGVILPAVRRAVAATRNGKIGVLGTQGTIAS 153 Query: 135 TYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 L + Y C + V I + R +I +G Sbjct: 154 GAYQELFAASPGVEVYAQACPSFVSFVERGITSGR-------------QILGVTQGYTEG 200 Query: 187 KEGKRTDVIVLACTHYPLIVHVFR 210 + D +VL CTHYPL+ V + Sbjct: 201 LQSAGVDTLVLGCTHYPLLTGVIQ 224 >gi|329121243|ref|ZP_08249870.1| glutamate racemase [Dialister micraerophilus DSM 19965] gi|327470177|gb|EGF15640.1| glutamate racemase [Dialister micraerophilus DSM 19965] Length = 257 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 96/215 (44%), Gaps = 29/215 (13%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK- 61 +DN P I I DSG+GGL V + +R PE I++ D PYG H + Sbjct: 1 MDNRP--------IGIMDSGVGGLTVARVLRQKYPEESIIFIGDTANNPYGERTSHEINV 52 Query: 62 ---KRLMFLFSDILDKYQPVLSVIACNT-AFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 K FL S + + +IACNT F + K+ P +P + A Sbjct: 53 LAGKMKKFLISKNVK-----MIIIACNTITFNVQKNFYDEKIPIEGMSLDLPHFENA--- 104 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 G I++ +TPAT+ N I I + LA +EE KI E +K Sbjct: 105 ---GSITVFATPATINLHIHKNKIKEKFPNSKIEEMPCEGLAHAIEENNSREKITEI-LK 160 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212 K IE +++ TD+ + ACTHYPL+ VF+++ Sbjct: 161 KIIE----KRKISPTDIGIFACTHYPLVEDVFKKI 191 >gi|220906704|ref|YP_002482015.1| glutamate racemase [Cyanothece sp. PCC 7425] gi|219863315|gb|ACL43654.1| glutamate racemase [Cyanothece sp. PCC 7425] Length = 295 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 20/270 (7%) Query: 7 PCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALK 61 P + L Q SI +FDSG+GGL VL+ ++ +P+ F+Y AD PYGN E Sbjct: 15 PANQSLSQQASIGVFDSGVGGLTVLRVLQQHLPQESFLYFADTAHLPYGNRCQAEIVTFA 74 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 ++++ ++ K + ++ACNT+ L D +R+ F ++ LG + P + A + Sbjct: 75 RQILTWMTEQGVK----MVIVACNTSSALALDIVRTEF-NLPILGLILPGAR--TAVQRG 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I I++T AT+ I Q + +S +E+ D E+ Sbjct: 128 KRIGIIATAATVASECYPQAILEANPQLQVWQMSCPEFVPLIEQNRIN-----DPYTLEV 182 Query: 181 EGCFIEKE-GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 +++ R D ++ CTHYP + V R++ P V +D + S+ A L + Sbjct: 183 ARTYLQPLIESRIDTLIYGCTHYPHLESVIRKVLPRSVQRIDPARSVVTAAARELELLGL 242 Query: 240 H-QTRVFDDHALFLSGKPDIAMRRLMQGFG 268 Q+R F SG P+ R Q G Sbjct: 243 RKQSRQTSSTRFFASGCPEQFARVSSQWLG 272 >gi|315648539|ref|ZP_07901638.1| glutamate racemase [Paenibacillus vortex V453] gi|315276233|gb|EFU39579.1| glutamate racemase [Paenibacillus vortex V453] Length = 268 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 115/264 (43%), Gaps = 38/264 (14%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-- 69 +Q +I I DSG+GGL V +++ +P IY D PYG ++ LF+ Sbjct: 1 MQQAIAILDSGVGGLTVAKEVMRQLPREKIIYFGDTARAPYGPRTPEEVR-----LFTEQ 55 Query: 70 --DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 D L +Y P + VIACNTA D + S S+ +G + P + A + T++G + ++ Sbjct: 56 IVDYLIQYDPKMIVIACNTATAAALDYISSKV-SVPVIGVIHPGARAAISATKTGNVGVI 114 Query: 127 STPATL-RRTYTSNL--IHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIE 181 T T+ YT+ L + YV V+ AC + + E + + E Sbjct: 115 GTTGTIGSGAYTAALKQLSPYV---------------EVQSQACPKLVPLVEHGLFRSKE 159 Query: 182 GCFIEKEGKR------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL- 234 + +E R D ++L CTHYP + + + + V + ++D AR +L Sbjct: 160 SLQVVQESLRGIKDTSIDCLILGCTHYPFLRNTIQTVMGPAVKLISSADETAREVSTILY 219 Query: 235 PRINTHQTRVFDDHALFLSGKPDI 258 + + H F +G P I Sbjct: 220 DKGQLASSEESPVHQFFCTGDPVI 243 >gi|229158101|ref|ZP_04286171.1| Glutamate racemase [Bacillus cereus ATCC 4342] gi|229198612|ref|ZP_04325314.1| Glutamate racemase [Bacillus cereus m1293] gi|228584894|gb|EEK43010.1| Glutamate racemase [Bacillus cereus m1293] gi|228625420|gb|EEK82177.1| Glutamate racemase [Bacillus cereus ATCC 4342] Length = 274 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + + Sbjct: 179 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 238 -SDHLFLTTGK 247 >gi|237719665|ref|ZP_04550146.1| glutamate racemase [Bacteroides sp. 2_2_4] gi|298482436|ref|ZP_07000622.1| glutamate racemase [Bacteroides sp. D22] gi|229450934|gb|EEO56725.1| glutamate racemase [Bacteroides sp. 2_2_4] gi|298271415|gb|EFI12990.1| glutamate racemase [Bacteroides sp. D22] Length = 280 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 23/234 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-- 187 T++ IH + + + + S VE +E + E FI K Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVE---------NNESQDEGADYFIRKYI 181 Query: 188 -----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + + D ++L CTH+P+++ RQ P + + + +A + L R Sbjct: 182 NQLLSKDPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKR 235 >gi|295088107|emb|CBK69630.1| glutamate racemase [Bacteroides xylanisolvens XB1A] Length = 280 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 23/234 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-- 187 T++ IH + + + + S VE +E + E FI K Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVE---------NNESQDEGADYFIRKYI 181 Query: 188 -----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + + D ++L CTH+P+++ RQ P + + + +A + L R Sbjct: 182 NQLLSKDPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKR 235 >gi|157693253|ref|YP_001487715.1| glutamate racemase [Bacillus pumilus SAFR-032] gi|167017314|sp|A8FFY8|MURI_BACP2 RecName: Full=Glutamate racemase gi|157682011|gb|ABV63155.1| glutamate racemase [Bacillus pumilus SAFR-032] Length = 272 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 11/248 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L I + DSG+GGL V +++ +P+ IYV D PYG ++ + + + + Sbjct: 2 LDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYVGDTKRCPYGPRKEEEVLQYTWEMAHYL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + + VIACNTA + DE+++T + +G + P + A T + I ++ T Sbjct: 62 LRHHHIKMLVIACNTATAIALDEIKATL-DIPVIGVIQPGARTAIKVTNNQQIGVIGTAN 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + + ++ +L VE + ++ +K +E +++ G Sbjct: 121 TIKSEAYKEALLSLKAGLAVQSLACPLLVPFVESGTFLDQTADEVVKDSLEP--MKETG- 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDD 247 D ++L CTHYP++ ++ V + + D AR A +L +NT Q Sbjct: 178 -IDTLILGCTHYPILKESIQRFMGSDVSIISSGDETAREASTILSYKGLLNTSQEAPV-- 234 Query: 248 HALFLSGK 255 H + +G+ Sbjct: 235 HTFYTTGQ 242 >gi|42783635|ref|NP_980882.1| glutamate racemase [Bacillus cereus ATCC 10987] gi|206975961|ref|ZP_03236871.1| glutamate racemase [Bacillus cereus H3081.97] gi|217961978|ref|YP_002340548.1| glutamate racemase [Bacillus cereus AH187] gi|222097946|ref|YP_002532003.1| glutamate racemase [Bacillus cereus Q1] gi|229141225|ref|ZP_04269764.1| Glutamate racemase [Bacillus cereus BDRD-ST26] gi|47606713|sp|O31332|MURI_BACC1 RecName: Full=Glutamate racemase gi|42739564|gb|AAS43490.1| glutamate racemase [Bacillus cereus ATCC 10987] gi|206745713|gb|EDZ57110.1| glutamate racemase [Bacillus cereus H3081.97] gi|217068220|gb|ACJ82470.1| glutamate racemase [Bacillus cereus AH187] gi|221242004|gb|ACM14714.1| glutamate racemase [Bacillus cereus Q1] gi|228642266|gb|EEK98558.1| Glutamate racemase [Bacillus cereus BDRD-ST26] gi|324328386|gb|ADY23646.1| glutamate racemase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 269 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + + Sbjct: 174 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 233 -SDHLFLTTGK 242 >gi|304570642|ref|YP_832062.2| glutamate racemase [Arthrobacter sp. FB24] Length = 351 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 14/219 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +YV D PYG ++ + + +++D Sbjct: 45 IGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDELVDSG 104 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L+ IACN+A + + R + + + + PA+++A A T+SG + ++ T AT Sbjct: 105 VKLLT-IACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVAATRSGRVGVIGTSAT 163 Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189 + R Y + HI V+ S VE GI + + E ++E Sbjct: 164 IGSRAYEDTF--AAAPDLHITSVACPAFVSYVE---AGITTGPELLAVARE--YLEPLRT 216 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYPL+ V + V + +++ A+ Sbjct: 217 AGVDTVVLGCTHYPLLTGVISYVMGEDVTLVSSAEETAK 255 >gi|30264552|ref|NP_846929.1| glutamate racemase [Bacillus anthracis str. Ames] gi|47530017|ref|YP_021366.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187374|ref|YP_030626.1| glutamate racemase [Bacillus anthracis str. Sterne] gi|49478653|ref|YP_038536.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65321850|ref|ZP_00394809.1| COG0796: Glutamate racemase [Bacillus anthracis str. A2012] gi|165871456|ref|ZP_02216103.1| glutamate racemase [Bacillus anthracis str. A0488] gi|167635587|ref|ZP_02393899.1| glutamate racemase [Bacillus anthracis str. A0442] gi|167641657|ref|ZP_02399902.1| glutamate racemase [Bacillus anthracis str. A0193] gi|170688300|ref|ZP_02879510.1| glutamate racemase [Bacillus anthracis str. A0465] gi|177653155|ref|ZP_02935442.1| glutamate racemase [Bacillus anthracis str. A0174] gi|190567038|ref|ZP_03019954.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I] gi|196034413|ref|ZP_03101822.1| glutamate racemase [Bacillus cereus W] gi|196039175|ref|ZP_03106481.1| glutamate racemase [Bacillus cereus NVH0597-99] gi|196044858|ref|ZP_03112092.1| glutamate racemase [Bacillus cereus 03BB108] gi|218905685|ref|YP_002453519.1| glutamate racemase [Bacillus cereus AH820] gi|225866466|ref|YP_002751844.1| glutamate racemase [Bacillus cereus 03BB102] gi|227817263|ref|YP_002817272.1| glutamate racemase [Bacillus anthracis str. CDC 684] gi|228929530|ref|ZP_04092549.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229602085|ref|YP_002868766.1| glutamate racemase [Bacillus anthracis str. A0248] gi|254687028|ref|ZP_05150886.1| glutamate racemase [Bacillus anthracis str. CNEVA-9066] gi|254724590|ref|ZP_05186373.1| glutamate racemase [Bacillus anthracis str. A1055] gi|254736586|ref|ZP_05194292.1| glutamate racemase [Bacillus anthracis str. Western North America USA6153] gi|254741624|ref|ZP_05199311.1| glutamate racemase [Bacillus anthracis str. Kruger B] gi|254754778|ref|ZP_05206813.1| glutamate racemase [Bacillus anthracis str. Vollum] gi|254757610|ref|ZP_05209637.1| glutamate racemase [Bacillus anthracis str. Australia 94] gi|254766106|sp|C1ETT1|MURI_BACC3 RecName: Full=Glutamate racemase gi|30259210|gb|AAP28415.1| glutamate racemase [Bacillus anthracis str. Ames] gi|47505165|gb|AAT33841.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181301|gb|AAT56677.1| glutamate racemase [Bacillus anthracis str. Sterne] gi|49330209|gb|AAT60855.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164712753|gb|EDR18283.1| glutamate racemase [Bacillus anthracis str. A0488] gi|167510364|gb|EDR85765.1| glutamate racemase [Bacillus anthracis str. A0193] gi|167529007|gb|EDR91762.1| glutamate racemase [Bacillus anthracis str. A0442] gi|170667806|gb|EDT18559.1| glutamate racemase [Bacillus anthracis str. A0465] gi|172081679|gb|EDT66750.1| glutamate racemase [Bacillus anthracis str. A0174] gi|190562029|gb|EDV15998.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I] gi|195992955|gb|EDX56914.1| glutamate racemase [Bacillus cereus W] gi|196024346|gb|EDX63019.1| glutamate racemase [Bacillus cereus 03BB108] gi|196029802|gb|EDX68403.1| glutamate racemase [Bacillus cereus NVH0597-99] gi|218535114|gb|ACK87512.1| glutamate racemase [Bacillus cereus AH820] gi|225786992|gb|ACO27209.1| glutamate racemase [Bacillus cereus 03BB102] gi|227006462|gb|ACP16205.1| glutamate racemase [Bacillus anthracis str. CDC 684] gi|228830109|gb|EEM75727.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229266493|gb|ACQ48130.1| glutamate racemase [Bacillus anthracis str. A0248] Length = 269 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + + Sbjct: 174 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 233 -SDHLFLTTGK 242 >gi|302206779|gb|ADL11121.1| Glutamate racemase [Corynebacterium pseudotuberculosis C231] gi|302331332|gb|ADL21526.1| Glutamate racemase [Corynebacterium pseudotuberculosis 1002] gi|308277024|gb|ADO26923.1| Glutamate racemase [Corynebacterium pseudotuberculosis I19] Length = 297 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 24/204 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ IY+ D PYG+ +++ M + +++ + Sbjct: 36 IGIFDSGVGGLTVARAIMEQLPQESVIYIGDTANSPYGSKPIAQVRELSMRIGDELVARG 95 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 ++ VIACNTA + +LR + S+ +G + PA+++A A T++G I +L T T+ Sbjct: 96 CKMI-VIACNTATSAALRDLRERY-SIPVVGVILPAVRRAVAATRNGKIGVLGTQGTIAS 153 Query: 135 TYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 L + Y C + V I + R +I +G Sbjct: 154 GAYQELFAASPGVEVYAQACPSFVSFVERGITSGR-------------QILGVAQGYTEG 200 Query: 187 KEGKRTDVIVLACTHYPLIVHVFR 210 + D +VL CTHYPL+ V + Sbjct: 201 LQSAGVDTLVLGCTHYPLLTGVIQ 224 >gi|118479648|ref|YP_896799.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam] gi|228917121|ref|ZP_04080679.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228935802|ref|ZP_04098614.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948207|ref|ZP_04110491.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093579|ref|ZP_04224680.1| Glutamate racemase [Bacillus cereus Rock3-42] gi|229124023|ref|ZP_04253215.1| Glutamate racemase [Bacillus cereus 95/8201] gi|229186725|ref|ZP_04313883.1| Glutamate racemase [Bacillus cereus BGSC 6E1] gi|118418873|gb|ABK87292.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam] gi|228596738|gb|EEK54400.1| Glutamate racemase [Bacillus cereus BGSC 6E1] gi|228659325|gb|EEL14973.1| Glutamate racemase [Bacillus cereus 95/8201] gi|228689788|gb|EEL43594.1| Glutamate racemase [Bacillus cereus Rock3-42] gi|228811565|gb|EEM57902.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823859|gb|EEM69679.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228842539|gb|EEM87629.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 274 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + + Sbjct: 179 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 238 -SDHLFLTTGK 247 >gi|75907689|ref|YP_321985.1| glutamate racemase [Anabaena variabilis ATCC 29413] gi|123610062|sp|Q3MD46|MURI_ANAVT RecName: Full=Glutamate racemase gi|75701414|gb|ABA21090.1| glutamate racemase [Anabaena variabilis ATCC 29413] Length = 292 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 18/219 (8%) Query: 9 EKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E++ Q + I +FDSG+GGL VL+++ +P IY D PYG + ++ Sbjct: 16 EQEPQRAPIGVFDSGVGGLTVLRQIYRQLPNESVIYFGDTARLPYGIRS----QAEILTF 71 Query: 68 FSDILDKYQPV---LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123 DILD Q + V+ACNT+ L D +R + LG + P K AA Q I Sbjct: 72 VRDILDWMQQQHVKMVVMACNTSSALALDIVREEY-DFPILGVILPGAK--AAVQQGKRI 128 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++STPAT + I + V +E+ +D E+ Sbjct: 129 GVISTPATAKSNAYRQAIWEIDPNVEVWQVGCPEFVPLIEQNRI-----QDPYTTEVARA 183 Query: 184 FIEKEGKR-TDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 ++E ++ D +V CTHYPL+ V R L P V +D Sbjct: 184 YLEPLIQQDIDTLVYGCTHYPLLAPVLRSLLPPQVKIID 222 >gi|228923236|ref|ZP_04086526.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836442|gb|EEM81793.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 269 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 14/263 (5%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188 T++ + S ++ +V S+ VE G E E+ E+ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245 D ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 175 STDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 232 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 DH +GK D+ + FG Sbjct: 233 SDHLFLTTGKIDLFKEIASKWFG 255 >gi|149241773|pdb|2GZM|A Chain A, Crystal Structure Of The Glutamate Racemase From Bacillus Anthracis gi|149241774|pdb|2GZM|B Chain B, Crystal Structure Of The Glutamate Racemase From Bacillus Anthracis gi|149241775|pdb|2GZM|C Chain C, Crystal Structure Of The Glutamate Racemase From Bacillus Anthracis gi|149241776|pdb|2GZM|D Chain D, Crystal Structure Of The Glutamate Racemase From Bacillus Anthracis Length = 267 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 1 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 60 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 61 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 119 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 172 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + + Sbjct: 173 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 231 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 232 -SDHLFLTTGK 241 >gi|293371702|ref|ZP_06618113.1| glutamate racemase [Bacteroides ovatus SD CMC 3f] gi|299147392|ref|ZP_07040457.1| glutamate racemase [Bacteroides sp. 3_1_23] gi|292633399|gb|EFF51969.1| glutamate racemase [Bacteroides ovatus SD CMC 3f] gi|298514670|gb|EFI38554.1| glutamate racemase [Bacteroides sp. 3_1_23] Length = 280 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECVGEISKNQHIGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ IH + + + + S VE + + I+K I+ + Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLL--SKD 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + D ++L CTH+P+++ RQ P + + + +A + L R Sbjct: 189 PQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKR 235 >gi|238021903|ref|ZP_04602329.1| hypothetical protein GCWU000324_01807 [Kingella oralis ATCC 51147] gi|237866517|gb|EEP67559.1| hypothetical protein GCWU000324_01807 [Kingella oralis ATCC 51147] Length = 266 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 7/211 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N I +FDSG+GGL V++ + +P + +Y D PYG + + + D L Sbjct: 4 NPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYG-VKSRSTIETFTAQIVDFLL 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATL 132 + Q VIACNT + ++ +M L + A QAA A T++G I +++T T+ Sbjct: 63 QNQVKALVIACNTIAAVAHQRVQQMAGNMPVLSVIEAGAQAALATTRNGNIGVIATSTTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I + + I ++ +L VEE ++ +++ + +K Sbjct: 123 NSNAYARAISARNADTRILSQAAPLLVPLVEEGWLEHEVTRLTVREYLRPLLADK----I 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 D ++L CTH+PL+ + +Q +P ++ +D+S Sbjct: 179 DTLILGCTHFPLLKPLIKQEAPH-IELVDSS 208 >gi|303236418|ref|ZP_07323007.1| glutamate racemase [Prevotella disiens FB035-09AN] gi|302483390|gb|EFL46396.1| glutamate racemase [Prevotella disiens FB035-09AN] Length = 280 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 25/235 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--------WEDHALKKRLMFL 67 I +FDSG GGL +L+ +R +P+Y +IY+ D+ PYG+ + A+KK L Sbjct: 12 IGVFDSGYGGLTILKGIREQLPQYDYIYLGDNARAPYGSRSFDIVYQFTLQAVKK----L 67 Query: 68 FSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 FS L ++ CNTA T+ K++L + P LG + P + T+S Sbjct: 68 FS-----MGCQLVILGCNTASAKALRTIQKNDLPNIDPRRRVLGVIRPTAEIVGKLTESK 122 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I IL+TP T++ + I + + + VE + + +KK I+ Sbjct: 123 HIGILATPGTIKSESYNMEIKKLWGNVEVTGEACPLWVPIVENNEAEGEGADYFVKKRID 182 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + + D ++L CTHYP+++ +Q P + + + +A + L R Sbjct: 183 HLL--QTDPKIDTLILGCTHYPILLPKIKQYVPEGIRIISQGEYVASSLKDYLSR 235 >gi|237651133|ref|ZP_04525385.1| glutamate racemase [Streptococcus pneumoniae CCRI 1974] gi|237820927|ref|ZP_04596772.1| glutamate racemase [Streptococcus pneumoniae CCRI 1974M2] Length = 264 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +++++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEKIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRKKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|312864874|ref|ZP_07725105.1| glutamate racemase [Streptococcus downei F0415] gi|311100001|gb|EFQ58214.1| glutamate racemase [Streptococcus downei F0415] Length = 264 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAQQIRD 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG V P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKEKL-DIPVLGVVLPGSSAAIKSTSSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I Q + ++ A VE ++ KK + Sbjct: 111 KIGVIGTPMTVKSDIYREKIVDLAPQMQVTSLACPRFAPLVESN----QMTSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ESLAPLVGK-VDTLILGCTHYPLLRGIIQNVMGPSVKLIDSGAETIRDVSVLLNYFQLNR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|52842520|ref|YP_096319.1| glutamate racemase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629631|gb|AAU28372.1| glutamate racemase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 288 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 8/228 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + ++++ Sbjct: 24 AIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMAKILVER 83 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA T L+S + L P A + T++ I++L+T T+ Sbjct: 84 RIKAL-VIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLATETTIA 142 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +LI + + + + +L + EE + + +K ++ E D Sbjct: 143 SRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE------D 196 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++L CTH+P+ + L P V +D++ + A LL N H Sbjct: 197 AVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNLHN 244 >gi|170708321|ref|ZP_02898765.1| glutamate racemase [Bacillus anthracis str. A0389] gi|170126696|gb|EDS95579.1| glutamate racemase [Bacillus anthracis str. A0389] Length = 269 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGDFESEMAYEVVRETLQPL------ 173 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + + Sbjct: 174 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 233 -SDHLFLTTGK 242 >gi|260584033|ref|ZP_05851781.1| glutamate racemase [Granulicatella elegans ATCC 700633] gi|260158659|gb|EEW93727.1| glutamate racemase [Granulicatella elegans ATCC 700633] Length = 480 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 13/227 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I DSG+GGL VL++ +P I++ D PYGN ++K + + Sbjct: 4 MSKAIGFIDSGVGGLTVLKEALKQLPHESMIFLGDSARCPYGNRTVEEIRKFTKEMVQFL 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFL--GAVPAIKQAAAYTQSGLISILS 127 L K ++ VIACNTA +I +EL+ T P + + G++ AIKQ T+S I++L Sbjct: 64 LKKDVKMI-VIACNTATAVILEELQETLDIPVVGVIQPGSLAAIKQ----TKSQKIAVLG 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++ I Q + + VE I + + + ++ Sbjct: 119 THATIQSDVYRKTIQKKNHQLMVTSLECPKFVPLVESNQTDSPIAKKVVAQTLQPLM--- 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 GK D ++L CTHYPL+ + + V +D+ LL Sbjct: 176 -GKEFDTLILGCTHYPLLKQRIQAVVGPQVTLIDSGAETVSTVSALL 221 >gi|332883073|gb|EGK03357.1| glutamate racemase [Dysgonomonas mossii DSM 22836] Length = 275 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 37/241 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG GGL +L +++ LMPEY + Y+ D+ PYG + K+ + LF Sbjct: 7 IGVFDSGYGGLTILSEIQALMPEYDYCYLGDNSRAPYGARSFEVVYEFTKQAVTALFDMG 66 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 + L ++ACNTA T+ + +L + P LG + P + T+S + + Sbjct: 67 CN-----LVILACNTASAKALRTIQQKDLPNMNPDKRVLGIIRPTAEIIGQITRSRHVGV 121 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEG 182 L T T++ SQ + ++ + +V AC + ++ +E + E Sbjct: 122 LGTVGTIQ------------SQSYPIEINKLFPDIKVTGEACPMWVPLVENNEYESEGAD 169 Query: 183 CFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 F++K + D+++L CTHYPL++H +++ P V L + IA + L Sbjct: 170 YFVKKNLDNILAKDPDIDILILGCTHYPLLLHKIKKILPKEVTALPQGEYIAHSLKDYLR 229 Query: 236 R 236 R Sbjct: 230 R 230 >gi|225850547|ref|YP_002730781.1| glutamate racemase [Persephonella marina EX-H1] gi|254766121|sp|C0QQ35|MURI_PERMH RecName: Full=Glutamate racemase gi|225646550|gb|ACO04736.1| glutamate racemase [Persephonella marina EX-H1] Length = 259 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 17/218 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM----FLFSD 70 SI IFDSG+GGL V +++ P Y+ D PYGN + + + +L+S Sbjct: 2 SIGIFDSGVGGLTVFREIDREFPFADIYYLGDTARVPYGNKSKETIIRYSLECANYLYSF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +D ++ACNTA + + LR +F + +G + P ++ A T++G I ++ T Sbjct: 62 GIDAL-----IVACNTASSYAIEALRESF-DIPVIGVIKPGVELAVKTTKNGRIGVIGTQ 115 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT++ I ++ + VEE KI E +K+ ++ Sbjct: 116 ATIKSGSYRTEIEKK-GDFTVYQKPCPLFVPLVEEGLIDHKITELTVKEYLDDIV----S 170 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 K D ++L CTHYPL+ V +++ P ++ +D+S + A Sbjct: 171 KGIDTLILGCTHYPLLKDVIKKIYPH-LNIIDSSKATA 207 >gi|146319360|ref|YP_001199072.1| glutamate racemase [Streptococcus suis 05ZYH33] gi|146321565|ref|YP_001201276.1| glutamate racemase [Streptococcus suis 98HAH33] gi|253752389|ref|YP_003025530.1| glutamate racemase [Streptococcus suis SC84] gi|253754215|ref|YP_003027356.1| glutamate racemase [Streptococcus suis P1/7] gi|253756149|ref|YP_003029289.1| glutamate racemase [Streptococcus suis BM407] gi|166231062|sp|A4W3D7|MURI_STRS2 RecName: Full=Glutamate racemase gi|166231064|sp|A4VX33|MURI_STRSY RecName: Full=Glutamate racemase gi|145690166|gb|ABP90672.1| Glutamate racemase [Streptococcus suis 05ZYH33] gi|145692371|gb|ABP92876.1| Glutamate racemase [Streptococcus suis 98HAH33] gi|251816678|emb|CAZ52319.1| glutamate racemase [Streptococcus suis SC84] gi|251818613|emb|CAZ56447.1| glutamate racemase [Streptococcus suis BM407] gi|251820461|emb|CAR47171.1| glutamate racemase [Streptococcus suis P1/7] gi|292558992|gb|ADE31993.1| Glutamate racemase [Streptococcus suis GZ1] Length = 264 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 18/257 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V +++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ V ACNTA ++ +E++ + LG + P A TQ+G Sbjct: 53 YTWQLVNFLLTKNVKMI-VFACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T++ I + + + ++ A VE + + + K++ Sbjct: 111 KVGVLGTAMTIQSDIYREKIQALSPETQVDSLACPKFAPLVESNS-----HQSSLAKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + D +VL CTHYPL+ + + V +D+ AR LL ++ Sbjct: 166 YETLRPLVGQVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225 Query: 242 TRVFDD--HALFLSGKP 256 +R D H + + P Sbjct: 226 SRTEKDIQHRFYTTASP 242 >gi|257463297|ref|ZP_05627695.1| glutamate racemase [Fusobacterium sp. D12] Length = 274 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 111/227 (48%), Gaps = 9/227 (3%) Query: 6 YPCEKKLQNSIL---IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 Y +K+ + I+ +FDSGIGGL VL + ++P+ +FIY AD PYG + K Sbjct: 3 YNVKKRKKGIIMKIGVFDSGIGGLSVLHQAMQMLPQENFIYYADIDHVPYGTKTKEEIIK 62 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 ++ K + VIACNTA + ELR + ++ +G PA+K+A + Sbjct: 63 YSSEAVEFLVQKGVKAI-VIACNTATSAAIQELREKY-TLPIIGMEPAVKKAIDFHPKKR 120 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++TP T++ NLI ++ HLV ++ L V +A +E+E+ + + Sbjct: 121 VLVIATPMTIQGEKLHNLIEKVDTE---HLVDAVALPKLV-TFAEEENFEEEEVTEYLRE 176 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + +VL CTH+ +++ P V +LD ++ ++ Sbjct: 177 ALKHFNLENYSSVVLGCTHFNYFKDSLKKMLPKGVHFLDGNEGTIKK 223 >gi|220913060|ref|YP_002488369.1| glutamate racemase [Arthrobacter chlorophenolicus A6] gi|219859938|gb|ACL40280.1| glutamate racemase [Arthrobacter chlorophenolicus A6] Length = 360 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 12/229 (5%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 + P I +FDSG+GGL V + + +P +YV D PYG ++ Sbjct: 34 DLPAAALETRPIGVFDSGVGGLTVARSIIDQLPNESILYVGDTAHGPYGPLPIAEVRANA 93 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQS 120 + + +++D +L+ IACN+A + + R + + + + PA+++A A T+S Sbjct: 94 LGVMDELVDSGVKLLT-IACNSASAAVLRDARERYTAKYGIPVIEVIQPAVRRAVAATRS 152 Query: 121 GLISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 G + ++ T AT+ R Y + HI V+ S VE GI E+ Sbjct: 153 GRVGVIGTSATVGSRAYEDTF--AAAPDLHITSVACPEFVSYVE---AGITTGP-ELLAV 206 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 E + D +VL CTHYPL+ V + V + +++ A+ Sbjct: 207 AEEYLAPLKASGVDTVVLGCTHYPLLTGVISYVMGADVTLVSSAEETAK 255 >gi|83312625|ref|YP_422889.1| glutamate racemase [Magnetospirillum magneticum AMB-1] gi|82947466|dbj|BAE52330.1| Glutamate racemase [Magnetospirillum magneticum AMB-1] Length = 284 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 4/211 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL V +R MP+ +Y+ D PYG + + + +++K Sbjct: 22 VGIFDSGVGGLTVAAAIRRAMPDERLLYLGDVARQPYGTKSPRTVTRYAVQAAEFLVEKG 81 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATLRR 134 L V+ACNTA + + + FP + LG V A AA + G I + +T T R Sbjct: 82 IKAL-VVACNTASAVALEAIAERFPGLPVLGVVEAGADGAARASARGRIVVAATEGTCRS 140 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I + V + + EE I D + + G + + D Sbjct: 141 EAYERAIARRRDGALVRCVPCPLFVALAEEGLTDGPIV-DSVARHYLGSLFDGT-EPGDC 198 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 +VL CTH+PL+ +L+ V +D +++ Sbjct: 199 LVLGCTHFPLLAPALSRLAGPEVTLVDCAEA 229 >gi|303238403|ref|ZP_07324938.1| glutamate racemase [Acetivibrio cellulolyticus CD2] gi|302594107|gb|EFL63820.1| glutamate racemase [Acetivibrio cellulolyticus CD2] Length = 268 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 19/229 (8%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL VL+++ L+P+ +Y D PYG + K Sbjct: 1 MDNRP--------IGVFDSGIGGLTVLKEINRLLPQESVVYFGDSGRAPYGTKSKETVIK 52 Query: 63 RLMFLFSDI--LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + F DI L + VIACNTA D ++ +F P AA T++ Sbjct: 53 ---YTFQDIRFLQNQDIKMIVIACNTASACSLDRVKHSFDFPIVEVVQPGSAAAAKETRN 109 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + ++ TPAT+ I S I + VEE E+EI +I Sbjct: 110 NRVGVIGTPATISSGVYEKAITRINSSIEIFSKPCPMFVPLVEEGWW-----ENEIAFKI 164 Query: 181 -EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 E + + D +VL CTHYPL+ + +++ V ++++ +A+ Sbjct: 165 AEEYLLPLKELDIDTLVLGCTHYPLLQNTIQKVMGDDVKLVNSALEVAK 213 >gi|54298200|ref|YP_124569.1| hypothetical protein lpp2258 [Legionella pneumophila str. Paris] gi|53751985|emb|CAH13411.1| hypothetical protein lpp2258 [Legionella pneumophila str. Paris] gi|307611149|emb|CBX00793.1| hypothetical protein LPW_24971 [Legionella pneumophila 130b] Length = 279 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 8/228 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + ++++ Sbjct: 15 AIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMAKILVER 74 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA T L+S + L P A + T++ I++L+T T+ Sbjct: 75 RIKAL-VIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLATETTIA 133 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +LI + + + + +L + EE + + +K ++ E D Sbjct: 134 SRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE------D 187 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++L CTH+P+ + L P V +D++ + A LL N H Sbjct: 188 AVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNLHN 235 >gi|317060877|ref|ZP_07925362.1| glutamate racemase [Fusobacterium sp. D12] gi|313686553|gb|EFS23388.1| glutamate racemase [Fusobacterium sp. D12] Length = 261 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 6/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL + ++P+ +FIY AD PYG + K ++ K Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADIDHVPYGTKTKEEIIKYSSEAVEFLVQKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA + ELR + ++ +G PA+K+A + + +++TP T++ Sbjct: 63 VKAI-VIACNTATSAAIQELREKY-TLPIIGMEPAVKKAIDFHPKKRVLVIATPMTIQGE 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NLI ++ HLV ++ L V +A +E+E+ + + + + Sbjct: 121 KLHNLIEKVDTE---HLVDAVALPKLV-TFAEEENFEEEEVTEYLREALKHFNLENYSSV 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VL CTH+ +++ P V +LD ++ ++ Sbjct: 177 VLGCTHFNYFKDSLKKMLPKGVHFLDGNEGTIKK 210 >gi|294811101|ref|ZP_06769744.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064] gi|294323700|gb|EFG05343.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064] Length = 256 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 108/257 (42%), Gaps = 16/257 (6%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSGIG L +R L P+ + D G P+G + +R + + ++ P Sbjct: 1 MDSGIGLLAAAAAVRGLRPDADLVLSQDPDGMPWGPRTPEGVTERALAVARAAA-EHAPD 59 Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 ++ACNTA LR+ P++ +G VPAIK AA G I+I +TPAT Y Sbjct: 60 ALIVACNTATVHALPALRAALEPAIPVIGTVPAIKPAA--VAGGPIAIWATPATTGSPYQ 117 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +LI + + V LA V+ +DE + + T +VL Sbjct: 118 RDLIGRFAGAVDVAEVPCPGLADAVDH-------ADDEAIDRAVAAAAARTPRDTRAVVL 170 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK-- 255 CTHY L+ R PV ++ ++A +A + + LSG+ Sbjct: 171 GCTHYELVAERIRDAIGTPVALHGSAGAVAAQALRRIGAAPAPGATASGTLTVLLSGRAS 230 Query: 256 --PDIAMRRLMQGFGLK 270 PD A+ R +G GL+ Sbjct: 231 ALPDRAL-RYAEGRGLQ 246 >gi|260890743|ref|ZP_05902006.1| glutamate racemase [Leptotrichia hofstadii F0254] gi|260859621|gb|EEX74121.1| glutamate racemase [Leptotrichia hofstadii F0254] Length = 261 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 9/223 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSGIGGL VL+++R ++P Y D PYG + + + +L+K Sbjct: 2 SIGVFDSGIGGLTVLKEIRKVLPNEKIYYFGDTARVPYGEKTKELIIRYSKEIVEFLLEK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA L EL+ F + +G + A + A T+S I ++ T AT++ Sbjct: 62 DVSAI-VVACNTATALALKELKEIF-KIPIIGVIEAGARTAINTTKSNEIGVIGTKATIK 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + + + + + VEE K+ IK +++ D Sbjct: 120 SEKYIEEIKLFNPKVKVFQKACPLFVPAVEEGILSGKLVNQIIK-----TYLDDFEGEID 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++L CTHYPL+ ++ P + +D + A + +L + Sbjct: 175 TLILGCTHYPLLKDAISKIYP-DIKIVDPAKETALDLKSILQK 216 >gi|157151279|ref|YP_001450953.1| glutamate racemase [Streptococcus gordonii str. Challis substr. CH1] gi|189030375|sp|A8AYU3|MURI_STRGC RecName: Full=Glutamate racemase gi|157076073|gb|ABV10756.1| glutamate racemase [Streptococcus gordonii str. Challis substr. CH1] Length = 264 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRD 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKSTHSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ TS++ + + S + + ++ KK + Sbjct: 111 KIGVIGTPMTV----TSDIYRKKIEALSPEMEVSSLACPKFVPLVESNELTSSVTKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLLPLAGK-VDTLVLGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|56477960|ref|YP_159549.1| glutamate racemase [Aromatoleum aromaticum EbN1] gi|56314003|emb|CAI08648.1| Glutamate racemase (EC 5.1.1.3), gene: MURI OR GLR OR NMA2026 OR NMB0458 [Aromatoleum aromaticum EbN1] Length = 267 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 6/208 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL V++ + +P H +Y D PYG + A + +D L + Sbjct: 7 IGVFDSGIGGLTVVRALMERLPLEHIVYFGDTARVPYG-VKSVATIRHFTEQITDFLLQQ 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRR 134 + ++ACNT + + +R S+ L + A QAA A ++S I ++ TP T+ Sbjct: 66 DVKMLIVACNTMAAVAAETVRQRAGSIPVLDVIEAGAQAAVAQSRSRGIGVIGTPTTVNS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + IH+ S ++ + + VEE + ++ ++ E+ D Sbjct: 126 NAYARRIHALDSGARVYSQACPLFVPLVEEGWLDHPVTRLTAQEYLKPVLAEE----VDS 181 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDN 222 +VL CTHYPL+ + R + V +D+ Sbjct: 182 LVLGCTHYPLLKPLLRDVVGPGVRLVDS 209 >gi|160885540|ref|ZP_02066543.1| hypothetical protein BACOVA_03540 [Bacteroides ovatus ATCC 8483] gi|156109162|gb|EDO10907.1| hypothetical protein BACOVA_03540 [Bacteroides ovatus ATCC 8483] Length = 280 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECIGEISKNQHIGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ IH + + + + S VE + + I+K I+ + Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLL--SKD 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + D ++L CTH+P+++ RQ P + + + +A + L R Sbjct: 189 PQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKR 235 >gi|254422538|ref|ZP_05036256.1| glutamate racemase [Synechococcus sp. PCC 7335] gi|196190027|gb|EDX84991.1| glutamate racemase [Synechococcus sp. PCC 7335] Length = 307 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 33/256 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I +FDSG+GGL VL++MR +P IY D PYGN K ++ +I+ Sbjct: 16 IGVFDSGVGGLTVLREMRSHLPAESIIYFGDTARVPYGNRS----KSEILRFVREIIAWM 71 Query: 74 -KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + L V+ACNT+ L+ +E+RS FP + LG V + A T I ++ST AT Sbjct: 72 IRLEVKLIVMACNTSSALVLEEVRSEFP-IPILGIVLPGARGAVKT-GKRIGVVSTEATA 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKE-----DEIKKEIEGCFI 185 + S ++ V + RV + C + + E D + ++ Sbjct: 130 K------------SDAYLQAVQEIDSTIRVWQVGCPEFVPLIESGRSYDPYTLTVAKRYL 177 Query: 186 EKE-GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 E D +V CTHYP + VF+Q+ P + +D + ++ A L + + Sbjct: 178 EPLIAAGIDTLVYGCTHYPHLAPVFKQILPTRIKLVDPAKHLSVAAAQELEILGLCNSNA 237 Query: 245 FDDHA----LFLSGKP 256 + A ++SG P Sbjct: 238 VETGATPTEFYVSGDP 253 >gi|257058497|ref|YP_003136385.1| glutamate racemase [Cyanothece sp. PCC 8802] gi|256588663|gb|ACU99549.1| glutamate racemase [Cyanothece sp. PCC 8802] Length = 281 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 26/232 (11%) Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMF 66 + +QNS I +FDSG+GGL VL+++ +P+ +Y AD PYGN + + R + Sbjct: 2 RSVQNSPIGVFDSGVGGLTVLRELYRQLPQESMLYFADTARLPYGNRSGAEILQYVREIL 61 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 ++ + + + ++ACNT+ L D +RS F + LG + P + AA Q I + Sbjct: 62 VW---MSQQNVKMVIMACNTSSALALDIVRSEF-NFPILGVILPGAR--AAVKQGQRIGV 115 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRVEEYACGIKIKEDEIKKEI 180 +STPAT + I + + V +I A+R+ D K++ Sbjct: 116 ISTPATAKSNAYRQAIQEINPKAQVWQVGCPEFVPLIEANRI----------HDPYTKQV 165 Query: 181 EGCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 ++ + D +V CTHY + +F+++ P V+ +D ++ + A+ Sbjct: 166 AWKYLAPLLAQNIDTLVYGCTHYRHLSPIFQEIIPPTVNLIDPANFVVAAAK 217 >gi|108758013|ref|YP_633888.1| glutamate racemase [Myxococcus xanthus DK 1622] gi|27804816|gb|AAO22860.1| glutamate racemase [Myxococcus xanthus] gi|108461893|gb|ABF87078.1| glutamate racemase [Myxococcus xanthus DK 1622] Length = 271 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 15/251 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+ + +P +Y+ D PYG + + + +L Sbjct: 6 HSPIGVFDSGVGGLTVLKALMARLPHESTVYLGDTARVPYGTKSGEVVTRYSLKNAEFLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ +L V+ACNTA + L + P +P + A A TQ G + I+ TP T+ Sbjct: 66 ERGIKLL-VVACNTASAVALPALEAALPVPVVGVILPGARAALARTQGGGVGIIGTPGTI 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACG---IKIKEDEIKKEIEGCFIEKE 188 R + S + + + EE + G + + D + + ++ Sbjct: 125 RSGAYQRALESADPRVRAKARACPLFVPLAEEGWTTGDVPLLVARDYLAE------FTRD 178 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFD 246 G D +VL CTHYPL+ V ++ V +D++++ A LL + +R Sbjct: 179 G--VDTLVLGCTHYPLLKGVIAEVVGPQVALVDSAEATADAVAALLSERDGLAPASRGTP 236 Query: 247 DHALFLSGKPD 257 +HA +++ P+ Sbjct: 237 EHAYYVTDVPE 247 >gi|262283242|ref|ZP_06061009.1| glutamate racemase [Streptococcus sp. 2_1_36FAA] gi|262261494|gb|EEY80193.1| glutamate racemase [Streptococcus sp. 2_1_36FAA] Length = 264 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRD 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKSTHSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ TS++ + + S + + ++ KK + Sbjct: 111 KIGVIGTPMTV----TSDIYRKKIEALSPEMEVSSLACPKFVPLVESNELTSSVTKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLLPLAGK-VDTLVLGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|260172140|ref|ZP_05758552.1| glutamate racemase [Bacteroides sp. D2] gi|315920449|ref|ZP_07916689.1| glutamate racemase [Bacteroides sp. D2] gi|313694324|gb|EFS31159.1| glutamate racemase [Bacteroides sp. D2] Length = 280 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECVEEISKNQHIGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ IH + + + + S VE + + I+K I+ + Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLL--SKD 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + D ++L CTH+P+++ RQ P + + + +A + L R Sbjct: 189 PQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKR 235 >gi|24380092|ref|NP_722047.1| glutamate racemase [Streptococcus mutans UA159] gi|29839525|sp|Q8DSQ5|MURI_STRMU RecName: Full=Glutamate racemase gi|24378087|gb|AAN59353.1|AE015000_11 putative glutamate racemase [Streptococcus mutans UA159] Length = 264 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 105/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG +K Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKT 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ V ACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWELVNFLLTKKVKMI-VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I I+ TP T++ I Q + ++ VE K+ KK + Sbjct: 111 QIGIIGTPMTIKSNIYEQKIRDLSPQMKVRSLACPKFVPIVESN----KMNSSVAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V+ +D+ R LL + ++ Sbjct: 167 ESLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPDVELIDSGAECVRDISVLLNYFDLNR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|149278811|ref|ZP_01884946.1| glutamate racemase [Pedobacter sp. BAL39] gi|149230430|gb|EDM35814.1| glutamate racemase [Pedobacter sp. BAL39] Length = 276 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 31/266 (11%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + SI IFDSG GGL V + + +P+Y++IY+ D+ PYG+ + + + Sbjct: 2 NISQSIGIFDSGFGGLTVFKSIAQKLPQYNYIYLGDNSRAPYGDRSFETVYRYTLECVEW 61 Query: 71 ILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124 + + P L ++ACNTA ++ + L +P LG + P + Y+ S I Sbjct: 62 LFGQGCP-LVILACNTASAKALRSIQQKVLPFKYPDRRVLGVIRPTAEVVGNYSNSRTIG 120 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGC 183 ++ T T++ S+ ++ V+ +V + +C + + E + I EG Sbjct: 121 VMGTRGTVK------------SESYLIEVAKFFPEIKVLQQSCPLWVPLIENNEHIHEGA 168 Query: 184 --FIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 F++K + D I+LACTHYPL++ R L P V L + +A L Sbjct: 169 DYFLKKYLGQLLAKDDAIDCILLACTHYPLLIPKLRALLPEKVALLGQGEIVADSLVDYL 228 Query: 235 PRINTHQTRVFDDHAL--FLSGKPDI 258 R + R+ D + F SG + Sbjct: 229 ERHPEMKDRLARDREMRFFTSGDTSV 254 >gi|38234423|ref|NP_940190.1| glutamate racemase [Corynebacterium diphtheriae NCTC 13129] gi|81564603|sp|Q6NFN4|MURI_CORDI RecName: Full=Glutamate racemase gi|38200686|emb|CAE50382.1| glutamate racemase [Corynebacterium diphtheriae] Length = 265 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 8/196 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P IY+ D PYG + A + L + L + Sbjct: 6 IGIFDSGVGGLTVARVIMEQLPNESVIYIGDTANSPYG-PKPIAQVRELSLAIGEELVRR 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA + +LR F + LG + PA+++A + T++G I ++ T T++ Sbjct: 65 GCKMIVIACNTATSAALRDLRERF-DVPVLGVILPAVRRAVSTTRNGKIGVIGTEGTIKS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L + S +H + S VE GI +I +G + D Sbjct: 124 GAYQELFAASPS-VEVHAQACPSFVSFVER---GIT-SGRQILGVAQGYVEPLQAAGVDT 178 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHYPL+ V + Sbjct: 179 LVLGCTHYPLLTGVIQ 194 >gi|299137116|ref|ZP_07030299.1| glutamate racemase [Acidobacterium sp. MP5ACTX8] gi|298601631|gb|EFI57786.1| glutamate racemase [Acidobacterium sp. MP5ACTX8] Length = 267 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 26/200 (13%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL+ + L+P H+IY+ D PYG+ + R + L++ Sbjct: 6 IGVFDSGFGGLTVLRALLPLVPGAHYIYLGDTARLPYGSKSQTTI-ARYAVESARFLEER 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L VIACNTA L E+R+ S+ +G + P ++ A S + +L+T AT++ Sbjct: 65 GSDLLVIACNTATALALPEIRAAV-SVPVVGVIEPVVRAANLQHPSAEVLVLATTATVQS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------EDEIKKEIEGCFIEK 187 H+Y+ C L R E AC + + + + +++ ++E+ Sbjct: 124 -------HAYLQHCE-------ALGLRATEKACPLLVPLVEEGWIDHPVTRDVLRIYLEE 169 Query: 188 EGKRTD--VIVLACTHYPLI 205 ++L CTHYPL+ Sbjct: 170 ALATCSPKAVLLGCTHYPLL 189 >gi|238764511|ref|ZP_04625459.1| Glutamate racemase [Yersinia kristensenii ATCC 33638] gi|238697323|gb|EEP90092.1| Glutamate racemase [Yersinia kristensenii ATCC 33638] Length = 186 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 6/177 (3%) Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 R FP +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S Sbjct: 9 RFDFP---VVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTLDLIERFATDCKIELLGS 65 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 L E G + + +KK + +E D IVL CTH+PL+ Q+ P Sbjct: 66 SELVELAETKLHGGAVPPEALKKILHPWLAMREPP--DTIVLGCTHFPLLSDELAQVLPE 123 Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271 +D+ +IARR L+ + ++ A ++ D A+ ++QG+G + Sbjct: 124 GTRMVDSGAAIARRTAWLISSQENVVSSQAENIAYCMALNTDTDALLPVLQGYGFPT 180 >gi|329964674|ref|ZP_08301728.1| glutamate racemase [Bacteroides fluxus YIT 12057] gi|328525074|gb|EGF52126.1| glutamate racemase [Bacteroides fluxus YIT 12057] Length = 281 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 29/237 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILSKIRETLPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVTKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P LG + P ++ TQS I +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQINDLPRLDPMRRVLGVIRPTVECIGNITQSRHIGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186 T++ SQ + V + +V AC + ++ +E + + FI Sbjct: 131 GTIK------------SQSYPLEVHKLFPDIKVSGEACPLWVPLVENNEARGDGTDYFIR 178 Query: 187 K-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 K + + D ++L CTHYP+++ RQ P + + + +A+ + L R Sbjct: 179 KYIDELLAKDNQIDTVILGCTHYPILLPKIRQYMPSGITTVAQGEFVAKSLKDYLQR 235 >gi|296111814|ref|YP_003622196.1| glutamate racemase [Leuconostoc kimchii IMSNU 11154] gi|295833346|gb|ADG41227.1| glutamate racemase [Leuconostoc kimchii IMSNU 11154] Length = 280 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 24/254 (9%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N I + DSG+GGL V++ + +P FI++ D PYG + + + + +++ Sbjct: 5 NPIGMVDSGVGGLTVIKAAQKQLPNEQFIFIGDTARMPYGPRTTDEVIAYTLQMANFLVN 64 Query: 74 KYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128 + L VIACNT A ++++D+L S+ +G + P K A T++ I +++T Sbjct: 65 EKHIKLLVIACNTATARALSVLQDQL-----SIPVIGVIQPGAKAAQLATKNKKIGVIAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKE---DEIKKEIEGCF 184 T+ +Y Q H H S + + S+ E E+ +++ + DE +K + Sbjct: 120 QGTVTS-------EAYDVQLH-HYNSQITVVSQAEPEFVQTVELNKYHSDEARKLVNSHL 171 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR-CLL-PRINTHQT 242 + + D ++L CTH+PL+ + V +D+ + + CL ++T Sbjct: 172 ATLKAAKIDTLILGCTHFPLLTPFIKSAIGENVTLIDSGQETVQVIQDCLAQSHLSTVSK 231 Query: 243 RVFDDHALFLSGKP 256 +D + +G P Sbjct: 232 HDHNDDVYYTTGDP 245 >gi|266620112|ref|ZP_06113047.1| glutamate racemase [Clostridium hathewayi DSM 13479] gi|288868341|gb|EFD00640.1| glutamate racemase [Clostridium hathewayi DSM 13479] Length = 272 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 + I +FDSG+GGL V +++ MPE +Y D PYGN + + ++ + FL Sbjct: 5 NSPIGVFDSGVGGLTVAREIMRQMPEERIVYFGDTARVPYGNKSGNTVIRFTRQIIRFLL 64 Query: 69 SDILDKYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + + VIACN TA+ L E P + + A + A T++G I I+ Sbjct: 65 TQDVKAI-----VIACNTATAYALEAVEGELDIPIIGVIHA--GARTATQATKNGKIGII 117 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI- 185 T T+R + ++ + +L VEE + D + EI ++ Sbjct: 118 GTEGTIRSGVYTKVMMEMRPDIEVTGKPCPLLVPLVEE-----GLLHDSVTDEIASRYLS 172 Query: 186 EKEGKRTDVIVLACTHYPLI-VHVFRQLSP 214 E +GK D +VL CTHYPL+ V R + P Sbjct: 173 ELKGKYIDTLVLGCTHYPLLRSTVGRLMGP 202 >gi|325690950|gb|EGD32950.1| glutamate racemase [Streptococcus sanguinis SK115] Length = 264 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + K++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ R D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNMMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|218245461|ref|YP_002370832.1| glutamate racemase [Cyanothece sp. PCC 8801] gi|226722982|sp|B7JWN0|MURI_CYAP8 RecName: Full=Glutamate racemase gi|218165939|gb|ACK64676.1| glutamate racemase [Cyanothece sp. PCC 8801] Length = 281 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 26/232 (11%) Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMF 66 + +QNS I +FDSG+GGL VL+++ +P+ +Y AD PYGN + + R + Sbjct: 2 RSVQNSPIGVFDSGVGGLTVLRELYRQLPQESMLYFADTARLPYGNRSGAEILQYVREIL 61 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 ++ + + + ++ACNT+ L D +RS F + LG + P + AA Q I + Sbjct: 62 VW---MSQQNVKMVIMACNTSSALALDIVRSEF-NFPILGVILPGAR--AAVKQGQRIGV 115 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRVEEYACGIKIKEDEIKKEI 180 +STPAT + I + + V +I A+R+ D K++ Sbjct: 116 ISTPATAKSNAYRQAIQEINPKAQVWQVGCAEFVPLIEANRI----------HDPYTKQV 165 Query: 181 EGCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 ++ + D +V CTHY + +F+++ P V+ +D ++ + A+ Sbjct: 166 AWKYLAPLLAQNIDTLVYGCTHYRHLSPIFQEIIPPTVNLIDPANFVVAAAK 217 >gi|291166140|gb|EFE28186.1| glutamate racemase [Filifactor alocis ATCC 35896] Length = 257 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 20/248 (8%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLM-FLFSD 70 +I IFDSGIGGL VL ++P +FIY AD PYG +E +M F S Sbjct: 2 NIGIFDSGIGGLSVLHHALKIIPHANFIYYADRKNVPYGEKSVFEIQTFIDEIMNFFISK 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGL-ISILST 128 +D VIACNTA ++ E R FP +G PA+K+A YT+ I + +T Sbjct: 62 KVDAL-----VIACNTASSVATKEYRDKFP-FPIIGMEPAVKKAVETYTEKQQRILVAAT 115 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 P T++ N + +++ + + +I ++ +A + E+++ I+ + Sbjct: 116 PITIQ----GNKLRQLLNRVDKYHQADLIALPKLVHFAELKQFDSLEVEEYIKTALNQYC 171 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 IVL CTH+ F+++ ++D ++ ++ P I ++ V Sbjct: 172 AVDYSAIVLGCTHFNYFKPSFQRIFSKKTQFIDGNEGTIKQLLRKAPLIESYSQSV---- 227 Query: 249 ALFLSGKP 256 + SG P Sbjct: 228 QFYFSGIP 235 >gi|213965871|ref|ZP_03394062.1| glutamate racemase [Corynebacterium amycolatum SK46] gi|213951449|gb|EEB62840.1| glutamate racemase [Corynebacterium amycolatum SK46] Length = 288 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 6/195 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+ D PYG +++ + +++ + Sbjct: 27 IGIFDSGVGGLTVARAIMDQLPHESIMYIGDTANGPYGPLRIAEVRQHAEAIADELVARG 86 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ VIACNTA + R +P +PA+++A + T++G + ++ T AT+R Sbjct: 87 CKMI-VIACNTASAAFLRDARERYPVPVVEVILPAVRRAVSTTRNGKVGVIGTAATIRSR 145 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L + V + V VE GI +I EG + D + Sbjct: 146 AYQDLFDA-VPGVDVSAVDCPRFVDFVER---GITSGR-QILGLAEGYLAPLQADGVDTL 200 Query: 196 VLACTHYPLIVHVFR 210 VL CTHYPL+ V + Sbjct: 201 VLGCTHYPLLSGVIQ 215 >gi|259047138|ref|ZP_05737539.1| glutamate racemase [Granulicatella adiacens ATCC 49175] gi|259036188|gb|EEW37443.1| glutamate racemase [Granulicatella adiacens ATCC 49175] Length = 482 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 13/227 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I DSG+GGL VL++ +P +++ D PYG +++ + + + Sbjct: 1 MKRPIGFIDSGVGGLTVLKEALKQLPNESMVFLGDSARCPYGTRPKEEIRQYTLEMVQFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFL--GAVPAIKQAAAYTQSGLISILS 127 L K +L VIACNTA ++ +EL+ T P + + G++ AIKQ T + I +L Sbjct: 61 LQKNIKML-VIACNTATAVVLEELKQTLEIPVVGVIQPGSLAAIKQ----TSNDRIGVLG 115 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ +H + ++ VE + +K+ + Sbjct: 116 TNATISSKVYPKTMHDKNKNIQVFDIACPNFVPLVENNQSDTPEAWEIVKETLNPL---- 171 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 EG D ++L CTHYPL+ +++ V +D+ LL Sbjct: 172 EGTNVDTVILGCTHYPLLRKTIQKVVGNQVSLIDSGAETVSSVSALL 218 >gi|229497077|ref|ZP_04390781.1| glutamate racemase [Porphyromonas endodontalis ATCC 35406] gi|229316002|gb|EEN81931.1| glutamate racemase [Porphyromonas endodontalis ATCC 35406] Length = 277 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 115/249 (46%), Gaps = 36/249 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL +L+++R LMP+Y ++Y+ D+ PYG+ + K + + + Sbjct: 8 IGIFDSGYGGLTILREIRKLMPQYDYLYLGDNARSPYGSRSFEIVYKFTLQAVERLFEMG 67 Query: 76 QPVLSVIACNTAF-----TLIKDEL-RSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128 P L ++ACNTA T+ + +L + + PS LG + P ++ T S + IL+T Sbjct: 68 CP-LVILACNTASAKALRTIQQQDLPQMSDPSRRVLGIIRPTVEAVDTITASKHVGILAT 126 Query: 129 PATLRRTYTSNLIHSY---VSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEG 182 T+ HSY +++ H++ V E AC + ++ E Sbjct: 127 EGTVSS-------HSYQMEIAKLFPHII--------VSEEACPMWVPLVENGEADSPGAD 171 Query: 183 CFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 ++ K + K D IVLACTHYPL+ ++L + + + +A + L Sbjct: 172 YYVRKHLDALLCKDKAIDTIVLACTHYPLLRQKIKRLITPSITVVSQGEYVASSLQDYLG 231 Query: 236 RINTHQTRV 244 R R+ Sbjct: 232 RQTEMDARL 240 >gi|212638431|ref|YP_002314951.1| glutamate racemase [Anoxybacillus flavithermus WK1] gi|212559911|gb|ACJ32966.1| Glutamate racemase [Anoxybacillus flavithermus WK1] Length = 278 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 12/261 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ I + DSG+GGL V +++ +P+ +Y+ D PYG +++ + ++ Sbjct: 14 LERPIGVIDSGVGGLTVAKEIMRQLPKEQIVYLGDTARCPYGPRPREEIRQ-FTWEMTNY 72 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L Y + VIACNTA + +E+R T ++ +G V P + A T++ I ++ T Sbjct: 73 LLGYDIKMLVIACNTATAVALEEIRHTL-NIPVIGVVHPGARTALKITKNYHIGVIGTIG 131 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S S I ++ VE + + +E K+ + + + Sbjct: 132 TVKSGAYEQALKSINSDVKIESLACPKFVPLVESG----QFEGEEAKQIVAESLEPFKDR 187 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDD 247 D ++L CTHYPL+ + +Q V + + D AR +L + T R + Sbjct: 188 PIDTLILGCTHYPLLSPLIQQYMGEHVKLICSGDETAREVSTILHHSGLLYTGNKR--RE 245 Query: 248 HALFLSGKPDIAMRRLMQGFG 268 H F +G + + + FG Sbjct: 246 HIFFTTGSKETFQQIASKWFG 266 >gi|319441880|ref|ZP_07991036.1| glutamate racemase [Corynebacterium variabile DSM 44702] Length = 277 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 22/206 (10%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL V + + +PE IY+ D PYG+ +++ + D++ Sbjct: 7 NSPIGVFDSGVGGLTVARAIVDQLPEESMIYIGDTANSPYGDKPLAVVRELATAIADDLV 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D+ ++ V+ACNTA + R +P +PA+++A + T++G + ++ T AT+ Sbjct: 67 DRGCKMI-VVACNTASAAFLRDARERYPVPIIEVILPAVRRAVSVTRNGRVGVIGTHATI 125 Query: 133 RRTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L + + C + V I R +I E Sbjct: 126 TSGAYQDLFRANPNVEVFAQDCPQFVPFVERGITTGR-------------QILGLAEAYL 172 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFR 210 + + D +VL CTHYPL+ V + Sbjct: 173 EPLKDEGVDTLVLGCTHYPLLTGVLQ 198 >gi|322377632|ref|ZP_08052122.1| glutamate racemase [Streptococcus sp. M334] gi|321281397|gb|EFX58407.1| glutamate racemase [Streptococcus sp. M334] Length = 264 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I+ + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKINDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|322385930|ref|ZP_08059571.1| glutamate racemase [Streptococcus cristatus ATCC 51100] gi|321270045|gb|EFX52964.1| glutamate racemase [Streptococcus cristatus ATCC 51100] Length = 264 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 18/249 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVVYIGDSARAPYGPRPAEQIRD 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A T G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKAKL-DIPVLGVILPGASAAIKSTTGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I + + + ++ VE +++ KK + Sbjct: 111 KIGVIGTPMTVQSDIYRKKIEALSPEMEVQSLACPKFVPLVESN----ELQSSLTKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLHPLAGK-VDTLVLGCTHYPLLRPIIQNMMGPSVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDDHAL 250 +R D H L Sbjct: 226 SR--DKHEL 232 >gi|307705571|ref|ZP_07642423.1| glutamate racemase [Streptococcus mitis SK597] gi|307620848|gb|EFN99932.1| glutamate racemase [Streptococcus mitis SK597] Length = 264 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E+++ + LG + P A + G Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSPGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 R Sbjct: 226 GR 227 >gi|46199582|ref|YP_005249.1| glutamate racemase [Thermus thermophilus HB27] gi|81567628|sp|Q72I52|MURI_THET2 RecName: Full=Glutamate racemase gi|46197208|gb|AAS81622.1| glutamate racemase [Thermus thermophilus HB27] Length = 257 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 17/225 (7%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I +FDSG+GGL VL+ +R L+P F+Y D PYG + A+ +R + + Sbjct: 2 KDPKAPIGVFDSGVGGLTVLKALRRLLPREEFLYFGDTARVPYGG-KPLAMVRRFAWEIA 60 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L + V+ACNTA + +L F PA + A + + GLI +T Sbjct: 61 GFLLRQGVKAIVVACNTASSAALPDLAEDLSVPVFGVVEPAARAARGFRKVGLIGTQATV 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 + Y + ++ C + + VEE + +D + + ++E Sbjct: 121 ES--GAYPRYVDLAWAKACPLFV-------PLVEE-----GLWDDPVALLVARHYLEDAP 166 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 K + ++L CTHYP + + P V LD+++ AR AR L Sbjct: 167 KDLEALILGCTHYPFLKGAIGAVLPG-VALLDSAELTAREVARAL 210 >gi|56421203|ref|YP_148521.1| glutamate racemase [Geobacillus kaustophilus HTA426] gi|261418316|ref|YP_003251998.1| glutamate racemase [Geobacillus sp. Y412MC61] gi|297529170|ref|YP_003670445.1| glutamate racemase [Geobacillus sp. C56-T3] gi|319767724|ref|YP_004133225.1| glutamate racemase [Geobacillus sp. Y412MC52] gi|81557797|sp|Q5KWI3|MURI_GEOKA RecName: Full=Glutamate racemase gi|56381045|dbj|BAD76953.1| glutamate racemase [Geobacillus kaustophilus HTA426] gi|261374773|gb|ACX77516.1| glutamate racemase [Geobacillus sp. Y412MC61] gi|297252422|gb|ADI25868.1| glutamate racemase [Geobacillus sp. C56-T3] gi|317112590|gb|ADU95082.1| glutamate racemase [Geobacillus sp. Y412MC52] Length = 264 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 7/246 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I + DSG+GGL V +++ +P+ IY+ D PYG + +R + D Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKEQIIYLGDTARCPYGPRPVEEV-RRFTWQMIDY 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + VIACNTA + D++R+ + LG + P + A T+ G I ++ T Sbjct: 60 LRQYPLKMLVIACNTATAVALDDVRAKL-DIPVLGVIHPGARAALKATRRGHIGVIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R + S + + ++ VE + E + Sbjct: 119 TIRSRAYEKALQSINPRVQVESLACPKFVPLVESG----DFEGQEAMAIVAESLAPLRPL 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 DV++L CTHYPL+ + R V + + AR +L T + L Sbjct: 175 PIDVLILGCTHYPLLAPLIRTYMGKRVKLICSGGETAREVSAILHHSQLLYTGEREPEHL 234 Query: 251 FLSGKP 256 F + P Sbjct: 235 FFTTGP 240 >gi|313673160|ref|YP_004051271.1| glutamate racemase [Calditerrivibrio nitroreducens DSM 19672] gi|312939916|gb|ADR19108.1| glutamate racemase [Calditerrivibrio nitroreducens DSM 19672] Length = 261 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 8/214 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GGL V + + YV D PYGN + K + L ++ Sbjct: 2 SIGVFDSGVGGLTVFKSIADRFKTVDIYYVGDTARVPYGNKSRDTIVKYSLELTEFLVKS 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + L V+ACNTA + D L++ + ++ +G V P A T++G I ++ T AT+ Sbjct: 62 FAVDLVVVACNTASSYALDFLKNRY-NIPIIGVVEPGCIAAINATKNGKIGVIGTQATIN 120 Query: 134 RTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +N + + ++ +L VEE + + +K+ ++G I EG Sbjct: 121 SNSYANTLSALTGGGVRVYQKGCPLLVPLVEEGKIEHPVTKIILKEYLDG--IVSEG--I 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 D ++L CTHYP++ V + P ++ +D+S +I Sbjct: 177 DTLILGCTHYPVLKDVINSIYP-ELNLVDSSVAI 209 >gi|302024339|ref|ZP_07249550.1| glutamate racemase [Streptococcus suis 05HAS68] gi|330833329|ref|YP_004402154.1| glutamate racemase [Streptococcus suis ST3] gi|329307552|gb|AEB81968.1| glutamate racemase [Streptococcus suis ST3] Length = 264 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 18/257 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V +++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ V ACNTA + +E++ + LG + P A TQ+G Sbjct: 53 YTWQLVNFLLTKNVKMI-VFACNTATAVAWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T++ I + + + ++ A VE + + + K++ Sbjct: 111 KVGVLGTAMTIQSDIYRQKIQALSPETQVDSLACPKFAPLVESNS-----HQSSLAKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + D +VL CTHYPL+ + + V +D+ AR LL ++ Sbjct: 166 YETLRPLVGKVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225 Query: 242 TRVFDD--HALFLSGKP 256 +R D H + + P Sbjct: 226 SRTEKDIQHRFYTTASP 242 >gi|197303990|ref|ZP_03169022.1| hypothetical protein RUMLAC_02727 [Ruminococcus lactaris ATCC 29176] gi|197296958|gb|EDY31526.1| hypothetical protein RUMLAC_02727 [Ruminococcus lactaris ATCC 29176] Length = 273 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 17/223 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V +++ +P+ + +Y D PYG+ + + + FS+ + ++ Sbjct: 11 VFDSGVGGLTVAREISRQLPDENIVYFGDTARVPYGSKSQNTIIR-----FSEQIIRFLK 65 Query: 78 VLS----VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 VIACNTA L D ++ F + LG V P + A T++ + ++ T AT+ Sbjct: 66 TKEVKAIVIACNTASALALDAVKDEF-DIPILGVVIPGARAAVEATKNRKVGVVGTEATV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191 + + +I + + + + VEE KE ++ +E+ ++E Sbjct: 125 QSGMYTKVIQGMNPEITVIEKACPLFVPLVEE-----GFKEHQVTEEVIEYYLESMRSTD 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYPL+ R + ++ + A +CLL Sbjct: 180 IDAMILGCTHYPLLRSKIRAYMGDKIQIVNPAYETAMDLKCLL 222 >gi|15827591|ref|NP_301854.1| glutamate racemase [Mycobacterium leprae TN] gi|221230068|ref|YP_002503484.1| glutamate racemase [Mycobacterium leprae Br4923] gi|1171077|sp|P46705|MURI_MYCLE RecName: Full=Glutamate racemase gi|254766120|sp|B8ZR57|MURI_MYCLB RecName: Full=Glutamate racemase gi|466915|gb|AAA50890.1| murI [Mycobacterium leprae] gi|13093142|emb|CAC31553.1| glutamate racemase [Mycobacterium leprae] gi|219933175|emb|CAR71267.1| glutamate racemase [Mycobacterium leprae Br4923] Length = 272 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 6/211 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ + Sbjct: 10 VFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLSIPEIRAHALAICDDLVGRGVK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 +L VIACNTA + R + +PA+++A A T++G I ++ T R T Sbjct: 70 IL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVAATRNGRIGVIGT----RATIA 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 S+ + ++++ V+ CG+ ++ EG + D +VL Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVECGVT-SGRQVLGLAEGYLEPLQRSGVDTLVL 183 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 CTHYPL+ + + V + +++ A+ Sbjct: 184 GCTHYPLLAGLIQLAMGENVTLVSSAEETAK 214 >gi|198275393|ref|ZP_03207924.1| hypothetical protein BACPLE_01555 [Bacteroides plebeius DSM 17135] gi|198271729|gb|EDY95999.1| hypothetical protein BACPLE_01555 [Bacteroides plebeius DSM 17135] Length = 281 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 9/237 (3%) Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 YP I +FDSG GGL +L K +P+Y ++Y+ D+ PYG + + Sbjct: 2 YPLSAPHTGPIGVFDSGYGGLTILGKFIERLPQYDYLYLGDNARAPYGTRSFEVVYDFTL 61 Query: 66 FLFSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + P L ++ACNTA ++ +++L P+ LG + P ++ T+ Sbjct: 62 QAVKKLFELGCP-LVILACNTASAKALRSIQQNDLPHMDPTRRVLGVIRPTVECIGEITR 120 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 +G + +L+T T+R I + ++ + VE + +KK Sbjct: 121 NGHVGLLATAGTVRSESYPLEIKKIFPDIQVTGMACPMWVPLVENKEYDGDGADYFVKKY 180 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 I+ I ++ D ++L CTHYPL++ RQ +P + + + ++ + L R Sbjct: 181 IDT--ILQKDPDIDTLILGCTHYPLLLQKIRQYTPSHIRLVTQGEYVSESLKDYLSR 235 >gi|311031420|ref|ZP_07709510.1| glutamate racemase [Bacillus sp. m3-13] Length = 269 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 12/251 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q I + DSG+GGL V +++ +P+ IY+ D PYG + + + + Sbjct: 1 MQRPIGVIDSGVGGLTVAKEIMRQLPKERIIYLGDTARCPYGPRPVDEV-RLYTWEMTRY 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + + VIACNTA ++ DE+R + +G V P + A T + + ++ T Sbjct: 60 LLTHDIKMLVIACNTATAVVLDEIREQL-DIPVIGVVDPGARTALKVTSNYQVGVIGTVG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIEKEG 189 T+ +N + S ++ + ++ VE E E KEI E +G Sbjct: 119 TINSGAYANALKSINNEVKVESLACPNFVPLVESGEF-----EGERAKEIVEDTLHLFKG 173 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDD 247 + D ++L CTHYPL+ + + + + + D AR +L ++ + R ++ Sbjct: 174 SKIDTLILGCTHYPLLTPTIQAVMGDGIQLISSGDETAREVSTILNFKKLLNKKQRT-EN 232 Query: 248 HALFLSGKPDI 258 H + +G ++ Sbjct: 233 HQFYTTGSKEL 243 >gi|196229452|ref|ZP_03128317.1| glutamate racemase [Chthoniobacter flavus Ellin428] gi|196226684|gb|EDY21189.1| glutamate racemase [Chthoniobacter flavus Ellin428] Length = 295 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 18/239 (7%) Query: 1 MKIDNYP-CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59 M D +P + + ++DSG GGL VL+++R +PE +IY+ D PYG + Sbjct: 1 MPADFFPNASSPISCPVGVYDSGYGGLTVLRQLRRTLPELDYIYLGDSGRAPYGGRDVDT 60 Query: 60 L----KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA--FLGAVPAIKQ 113 + ++ + LF++ + V+AC+T + L+ + S LG + Sbjct: 61 ILDFAEQCVERLFAEGCR-----VVVVACHTVSCVALRHLQHRYGSAERRILGVTIPAAE 115 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 AA G I + T T+ + ++ + V + +LA VEE +I Sbjct: 116 AAVNRTRGHIGFVGTARTVASHTFRTEVRKLNAEVKVTEVPAPLLAPIVEEGWEDTEIAR 175 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 +++ + F D +VL CTHYPL+ F++L+P PV L+ + +A R R Sbjct: 176 LAVQRYL-AMF-----DGVDTLVLGCTHYPLLEREFQELTPAPVQVLNPAPEVAERFRA 228 >gi|111023014|ref|YP_705986.1| glutamate racemase [Rhodococcus jostii RHA1] gi|110822544|gb|ABG97828.1| probable glutamate racemase [Rhodococcus jostii RHA1] Length = 257 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 16/244 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L P+ I D G P+G + + R++ LD+ Sbjct: 3 VALIDSGLGMLPTSAWLRKLRPDLDLILALDPDGAPWGPKPEQWVIDRVLATAQRCLDRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ V+ CNTA D +R P++ +G VPAIK AAA +S +++ +T AT Sbjct: 63 AEVI-VLPCNTASVTALDHVREFVGPAVPVVGTVPAIKPAAAACES--VAVWATAATTAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++LI + + + V+ LA ++ E + +E+ Sbjct: 120 RYQADLIEKFGNGSSVVGVACHGLAEAIDR-------GERDAATAAIASAVERTPDDVGG 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LFL 252 +VL CTHYPL+ P V D+++++A + L RI+ + +FL Sbjct: 173 VVLGCTHYPLMADEIAAQLPAGVRLFDSAEAVATQT---LRRIDALNRPSAGEGTVEVFL 229 Query: 253 SGKP 256 SG+P Sbjct: 230 SGRP 233 >gi|212637364|ref|YP_002313889.1| glutamate racemase [Shewanella piezotolerans WP3] gi|212558848|gb|ACJ31302.1| Glutamate racemase [Shewanella piezotolerans WP3] Length = 273 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 21/233 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +I IFD+GIG + +K+R P+ +Y+AD FPYG+ L + + + Sbjct: 1 MQKAIAIFDAGIGSYSITEKLRKAFPKADLVYLADRASFPYGHKTQPELLSLIYSAMNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA- 130 D Y P L V+A N + +++R + +G P +K+A + S L+ +L + Sbjct: 61 QDNYSPQLIVLASNVPSVTVLEQVRELI-DVPIIGVYPPVKKALDISTSSLVGVLGVKSL 119 Query: 131 ----TLRRTYTSNLI-----HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + R +N+I S+ + +HLV S E+ + ++ +K+ I+ Sbjct: 120 VCSEQMTRYIENNVIKGQQAKSFDASELVHLVES-------GEFLFNQEKTKETVKRYID 172 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++ D L+ TH P + F L P +++LD +D + R ++ Sbjct: 173 TLLVQY--PTMDTFTLSSTHLPWLWDYFTTLYP-TLNFLDPADDVVAGIRSVV 222 >gi|52141014|ref|YP_085815.1| glutamate racemase [Bacillus cereus E33L] gi|81686030|sp|Q633V2|MURI_BACCZ RecName: Full=Glutamate racemase gi|51974483|gb|AAU16033.1| glutamate racemase [Bacillus cereus E33L] Length = 269 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTERCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188 T++ + S ++ +V S+ VE G E E+ E+ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRV---VVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245 D ++L CTHYP++ V +Q+ V + + D AR +L +N + + Sbjct: 175 NTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 232 Query: 246 DDHALFLSGK 255 DH +GK Sbjct: 233 SDHLFLTTGK 242 >gi|223934204|ref|ZP_03626140.1| glutamate racemase [Streptococcus suis 89/1591] gi|223897120|gb|EEF63545.1| glutamate racemase [Streptococcus suis 89/1591] Length = 264 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 18/257 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V +++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ V ACNTA + +E++ + LG + P A TQ+G Sbjct: 53 YTWQLVNFLLTKNVKMI-VFACNTATAVAWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T++ I + + + ++ A VE + + + K++ Sbjct: 111 KVGVLGTAMTIQSDIYRQKIQALSPKTQVDSLACPKFAPLVESNS-----HQSSLAKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + D +VL CTHYPL+ + + V +D+ AR LL ++ Sbjct: 166 YETLRPLVGKVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225 Query: 242 TRVFDD--HALFLSGKP 256 +R D H + + P Sbjct: 226 SRTEKDIQHRFYTTASP 242 >gi|289549102|ref|YP_003474090.1| glutamate racemase [Thermocrinis albus DSM 14484] gi|289182719|gb|ADC89963.1| glutamate racemase [Thermocrinis albus DSM 14484] Length = 255 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 24/221 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL+ +R P+ +Y+ D PYG+ + +R ++ L + Sbjct: 3 IGVFDSGIGGLTVLKAIRERYPKVDLLYLGDTARVPYGSKSKETV-QRYSIECAEFLLGH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA D LR P F P +++A SG + ++ T T+ Sbjct: 62 DVDLVVVACNTASAYALDLLRERLPVEVFGVIEPGVEEALRVCTSGKVGVIGTRGTISSG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE---KEG 189 NL+ +V AC + ++E ++ + +E K+ Sbjct: 122 AYQNLLQKK--------------GVKVLAKACPLFVPLVEEGMVRGPVAELLVEHYLKDL 167 Query: 190 KRT--DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 K + D ++L CTHYPL+ V + V +D++ + AR Sbjct: 168 KESGIDTLILGCTHYPLLKDVIQAYMDGTV-IVDSAHATAR 207 >gi|298370218|ref|ZP_06981534.1| glutamate racemase [Neisseria sp. oral taxon 014 str. F0314] gi|298281678|gb|EFI23167.1| glutamate racemase [Neisseria sp. oral taxon 014 str. F0314] Length = 269 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 6/203 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL ++ + +P + +Y D PYG ++ + + +L Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIVYFGDTARVPYGTKSRATIETFALQIVDFLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ L +IACNT + ++R +M L + A +AA + T++ I I++T T Sbjct: 66 EQDVKAL-IIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALSTTRNNRIGIIATNTT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IHS + ++ +L VEE ++ ++ ++ ++ Sbjct: 125 VNSNAYARAIHSRNPDTLVRTQAAALLVPLVEEGWLDHEVTRLTAREYLKPLLVDN---- 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 D +VL CTH+PL+ + RQ +P Sbjct: 181 IDTLVLGCTHFPLLKPLIRQEAP 203 >gi|228903012|ref|ZP_04067151.1| Glutamate racemase [Bacillus thuringiensis IBL 4222] gi|228856605|gb|EEN01126.1| Glutamate racemase [Bacillus thuringiensis IBL 4222] Length = 269 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYQVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 174 KSTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 233 -SDHLFLTTGK 242 >gi|60680023|ref|YP_210167.1| putative glutamate racemase [Bacteroides fragilis NCTC 9343] gi|265765173|ref|ZP_06093448.1| glutamate racemase [Bacteroides sp. 2_1_16] gi|60491457|emb|CAH06207.1| putative glutamate racemase [Bacteroides fragilis NCTC 9343] gi|263254557|gb|EEZ25991.1| glutamate racemase [Bacteroides sp. 2_1_16] Length = 280 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA T+ ++L + P LG + P + + TQ+ + IL+T Sbjct: 71 GCHLVILACNTASAKALRTIQMNDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ +H + + + VE + + I+K I+ + Sbjct: 131 GTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEANGEGADFFIRKYIDNLLAKD-- 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++ D +VL CTHYP+++ ++ P V + + +A + L R Sbjct: 189 RQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHR 235 >gi|288553638|ref|YP_003425573.1| glutamate racemase [Bacillus pseudofirmus OF4] gi|288544798|gb|ADC48681.1| glutamate racemase [Bacillus pseudofirmus OF4] Length = 269 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 34/261 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + + Sbjct: 1 MDRPIGVIDSGLGGLTVAKELMRQLPKEEIVYLGDSARCPYGPRTSEEVRTYTWEMINRL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L++ +L VIACNTA ++ +E++ S+ +G V P A T+ ++++ T Sbjct: 61 LEENMKML-VIACNTATAVVLEEVKKEL-SIPVVGVVHPGATSALKVTKKDHVAVIGTVG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEKE 188 T+ S + + S+ +VE AC + + E + + E I KE Sbjct: 119 TIE------------SGAYEKALKSINHEVKVESLACPPFVPLVERGVFEGAEADLIVKE 166 Query: 189 ------GKRTDVIVLACTHYPLIVHVF-RQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ +Q+ P V + + D AR LL H Sbjct: 167 VLEPLQNRGFDTMILGCTHYPLLKDTIQKQMGP-DVQLISSGDETAREVSGLL----YHN 221 Query: 242 TRVFDD-----HALFLSGKPD 257 +F D H F +G D Sbjct: 222 NLLFTDQRKPTHRFFTTGDKD 242 >gi|284043326|ref|YP_003393666.1| glutamate racemase [Conexibacter woesei DSM 14684] gi|283947547|gb|ADB50291.1| glutamate racemase [Conexibacter woesei DSM 14684] Length = 283 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 8/216 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL ++ +P F+Y+ D FPYG+ L+ + +L Sbjct: 14 IAVFDSGVGGLTVLHELLVSLPSEDFLYLGDTARFPYGDKSQEELRVCSAEIADHLLVAG 73 Query: 76 QPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 +L V+AC TA L E R + LG + PA + A T SG I +L+TPAT+ Sbjct: 74 AKLL-VVACGSATAAALPLLEERLAGSGVDVLGVIAPAAQLAVEATASGRIGVLATPATV 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +N I + + V LA ++ G E + + + Sbjct: 133 ASGAYANAIAASDPHVRLESVPCPDLAPIIQ---SGFPFDE-RVVETVRRYTAPLRAAEV 188 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L THYPL+ + +++ V + + + + R Sbjct: 189 DTVILGSTHYPLVAPMLQRMLGRGVHLVTSGEGVVR 224 >gi|229817186|ref|ZP_04447468.1| hypothetical protein BIFANG_02445 [Bifidobacterium angulatum DSM 20098] gi|229784975|gb|EEP21089.1| hypothetical protein BIFANG_02445 [Bifidobacterium angulatum DSM 20098] Length = 259 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 7/221 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++ MP+ +Y D PYG ++ L F + K Sbjct: 7 IGVFDSGLGGISVARQIAHDMPDEKVLYFGDSANAPYGTKTPQQVRD-LSFAIVEQFVKQ 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133 VIACNTA + D LR T+ + +G PA+K A + + + +TP TLR Sbjct: 66 GVKAVVIACNTATSAAADALRDTY-DIPIIGMEPALKVACDRGHGHRQRVIVAATPLTLR 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ + + I L + VE G D + + + F + D Sbjct: 125 ERKFAKLMDRFKADHTIFPEPCPGLVNIVEH---GQLDDHDTVMRTLHHYFGNYDLPTID 181 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+ FR+L P +D ++ R +L Sbjct: 182 SVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLHVVL 222 >gi|83312678|ref|YP_422942.1| glutamate racemase [Magnetospirillum magneticum AMB-1] gi|82947519|dbj|BAE52383.1| Glutamate racemase [Magnetospirillum magneticum AMB-1] Length = 273 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 6/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P IY+ D PYG + + ++ Y Sbjct: 9 IGIFDSGVGGLTVLKAVRERLPGESLIYLGDTARLPYGTKSAQTVAAYALEATRRLV-SY 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 ++A NT+ + LR+ FP + +G V P AAA + G I++++T + ++ Sbjct: 68 GIKALLVADNTSSAHALEGLRAAFPGLPVIGVVEPGATAAAAASARGRIAVIATESAVQA 127 Query: 135 -TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 TY ++HS + + + S VEE I E + ++ F + D Sbjct: 128 GTYPRAILHSR-PNAQVTQLPCPLFVSMVEEGLVDGPIAEQIARHYLDPLFSGPDA--AD 184 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 ++L CTH+P + +FR+L V +D++ + A Sbjct: 185 CLLLGCTHFPALAPLFRRLLGRDVAVVDSASTTA 218 >gi|228974598|ref|ZP_04135164.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981193|ref|ZP_04141493.1| Glutamate racemase [Bacillus thuringiensis Bt407] gi|228778393|gb|EEM26660.1| Glutamate racemase [Bacillus thuringiensis Bt407] gi|228785001|gb|EEM33014.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 274 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188 T++ + S ++ +V S+ VE G E E+ E+ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 179 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245 D ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 180 STGIDTLILGCTHYPILGPVIKKVMGNKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 237 Query: 246 DDHALFLSGK 255 DH +GK Sbjct: 238 SDHLFLTTGK 247 >gi|312870481|ref|ZP_07730601.1| glutamate racemase [Lactobacillus oris PB013-T2-3] gi|311094038|gb|EFQ52362.1| glutamate racemase [Lactobacillus oris PB013-T2-3] Length = 266 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 7/200 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL VL+ +R +P+ ++V D FPYG + A +RL L ++ Sbjct: 6 IGVMDSGLGGLSVLRVLRRELPDESLLFVGDQGHFPYGT-KTQAEVRRLALAIGRFLVRH 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA T + +G + AA T I ++ T +T++ Sbjct: 65 DAKLMVVACNTA-TGAALPALQAALPIPVIGVIRPGASAALATNPRTIGVIGTDSTIKNG 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +H + + L S VE G + + K ++ CF + + + Sbjct: 124 AYERTLHELQPAVQVVSQPAQPLVSIVEHGQTGTPAAQQAVDKVLQ-CFATQP---VETL 179 Query: 196 VLACTHYPLIV-HVFRQLSP 214 +L CTH+P + + R+L P Sbjct: 180 ILGCTHFPFLSREIQRRLGP 199 >gi|213691663|ref|YP_002322249.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254766108|sp|B7GPZ1|MURI_BIFLI RecName: Full=Glutamate racemase gi|213523124|gb|ACJ51871.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457754|dbj|BAJ68375.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 264 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 19/230 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++ MP H +Y D PYG ++ L DI++++ Sbjct: 7 IGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRA----LSFDIVERF 62 Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--------AYTQSGLIS 124 Q V + VIACNTA + ++LR + + +G PA+K A + + Sbjct: 63 VRQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TP TLR + L+ + SQ I L VE G D + + + G F Sbjct: 122 VAATPLTLRERKFATLMDRFDSQNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + + D +VL CTH+ FR+L P +D ++ R +L Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVL 228 >gi|229032138|ref|ZP_04188115.1| Glutamate racemase [Bacillus cereus AH1271] gi|228729194|gb|EEL80193.1| Glutamate racemase [Bacillus cereus AH1271] Length = 274 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 179 KNTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 238 -SDHLFLTTGK 247 >gi|229175163|ref|ZP_04302679.1| Glutamate racemase [Bacillus cereus MM3] gi|228608299|gb|EEK65605.1| Glutamate racemase [Bacillus cereus MM3] Length = 274 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 179 KNTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 238 -SDHLFLTTGK 247 >gi|75760743|ref|ZP_00740765.1| Glutamate racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491771|gb|EAO54965.1| Glutamate racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 274 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYQVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 179 KSTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 238 -SDHLFLTTGK 247 >gi|228941671|ref|ZP_04104218.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228817883|gb|EEM63961.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942279|gb|AEA18175.1| glutamate racemase [Bacillus thuringiensis serovar chinensis CT-43] Length = 269 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188 T++ + S ++ +V S+ VE G E E+ E+ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245 D ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 175 STGIDTLILGCTHYPILGPVIKKVMGNKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 232 Query: 246 DDHALFLSGK 255 DH +GK Sbjct: 233 SDHLFLTTGK 242 >gi|229105119|ref|ZP_04235770.1| Glutamate racemase [Bacillus cereus Rock3-28] gi|228678300|gb|EEL32526.1| Glutamate racemase [Bacillus cereus Rock3-28] Length = 273 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 179 KNTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 238 -SDHLFLTTGK 247 >gi|306820477|ref|ZP_07454113.1| glutamate racemase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551552|gb|EFM39507.1| glutamate racemase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 271 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 17/229 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+G VL K+ +MP ++IY D PYG L+K L D L + Sbjct: 6 IGIFDSGVGAFSVLNKLVEVMPNENYIYFGDSGHNPYGQKTAEELQK-LCSCIVDFLTRK 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR- 133 + VIACNTA D L+ + + +G + P K+A T++ I + ST T + Sbjct: 65 EVKAIVIACNTATVAALDYLQERY-YLPIIGVINPGAKEALRLTKNNKIGVCSTVFTAKT 123 Query: 134 RTYTS--NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEG 189 Y + N + + ++ S+ LA+ +E G + ++ I KE+ G F + Sbjct: 124 HGYLNDINKVSNNDKSLKVYEEGSVNLANIIEN---GFEYNDENEAIIKELVGRFTD--- 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D ++L CTHYPL+ +F + + + +D A AR +L N Sbjct: 178 -NIDTLILGCTHYPLVEDLFAKY--FKGNIVDPGMQTAIEARNILKAKN 223 >gi|240169479|ref|ZP_04748138.1| glutamate racemase [Mycobacterium kansasii ATCC 12478] Length = 271 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 19/257 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL V + + +P+ IYV D PYG ++ + + D++D+ Sbjct: 10 IFDSGVGGLTVARAIIDQLPDEDIIYVGDTGNGPYGPLTIPEIRAHALAIGDDLVDRGVK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 VL VIACN+A + R + +PA+++A A T++G I ++ T R T T Sbjct: 70 VL-VIACNSASAACLRDARERYDVPVVEVILPAVRRAVAATRNGRIGVIGT----RATIT 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 S+ + ++++ V+ G+ ++ EG + D +VL Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVERGVTSGR-QVLGLAEGYLEPLQRAGVDTLVL 183 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR-------RARCLLPRINTHQTRVFDDHAL 250 CTHYPL+ + + V + +++ A+ ++ L P TRVF+ Sbjct: 184 GCTHYPLLSGLIQLAMGDHVTLVSSAEETAKEVLRVLTQSDLLRPHDAPPATRVFE---- 239 Query: 251 FLSGKPDIAMRRLMQGF 267 +G P+ A RL F Sbjct: 240 -ATGDPE-AFTRLAARF 254 >gi|229098955|ref|ZP_04229890.1| Glutamate racemase [Bacillus cereus Rock3-29] gi|229117984|ref|ZP_04247344.1| Glutamate racemase [Bacillus cereus Rock1-3] gi|228665433|gb|EEL20915.1| Glutamate racemase [Bacillus cereus Rock1-3] gi|228684453|gb|EEL38396.1| Glutamate racemase [Bacillus cereus Rock3-29] Length = 268 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 174 KNTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 233 -SDHLFLTTGK 242 >gi|291533966|emb|CBL07079.1| glutamate racemase [Megamonas hypermegale ART12/1] Length = 270 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL--FSDILD 73 I +FDSG+GGL VL+++R L+P +FI+V D PYG+ + + FL F D Sbjct: 7 IGVFDSGLGGLTVLKELRRLLPHENFIFVGDSARAPYGSRTPEEI---ISFLQQFMDYFQ 63 Query: 74 KYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++V ACNT + +IKD+ S A + PAI A + + I +++T Sbjct: 64 SRGVKMAVCACNTMTSYGYPVIKDKT-----SFALVPMNPAIIPAVKASANKHIGVIATE 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+++ + Q + V +E I +D I + ++ + + Sbjct: 119 ATIKKGMHKQAASNLDPQIKVFGVGCPKFVPLIETG----HIHDDAIDEAVQEYADKFKT 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 ++L CTHYP+I V + V ++ + A+ A +L + N T+ Sbjct: 175 SDIHSLILGCTHYPIISEVLTKHFGKDVALINPALETAKDAATILTKNNLLNTQ 228 >gi|304317524|ref|YP_003852669.1| glutamate racemase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779026|gb|ADL69585.1| glutamate racemase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 264 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 28/252 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL++++ L+P +IY D PYG ++K + + +K Sbjct: 6 IGVFDSGVGGLTVLKRLKELLPNEDYIYFGDTKRVPYGEKSKKEIEKYARQIVHFMNEKN 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATLR- 133 ++ VIACNT I ++ + + F + A ++AAY T++ + +++T T+ Sbjct: 66 TKII-VIACNTTCASID---KNEYSEILF-NVLEAGAESAAYLTKNKKVGVIATTRTIES 120 Query: 134 RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 R+Y N+ I + C + LV LA+ E + C KE Sbjct: 121 RSYEKNIKLIDSGIDVFGKACPRFVPLVEEG-LANSDEAFKCA---------KEYLSVLN 170 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 +E D +VL CTHYP++++ + V +D + ++ + + L +R+ Sbjct: 171 NEE---IDTLVLGCTHYPILINAIKNAVHKDVIIVDPAIKLSEKVKSYLEENAMLNSRLT 227 Query: 246 DDHALFLSGKPD 257 F+SG + Sbjct: 228 GKTEYFVSGNKE 239 >gi|54295149|ref|YP_127564.1| hypothetical protein lpl2229 [Legionella pneumophila str. Lens] gi|53754981|emb|CAH16469.1| hypothetical protein lpl2229 [Legionella pneumophila str. Lens] Length = 279 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + ++++ Sbjct: 15 AIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMAKILVER 74 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA T L+S + L P A + T++ I++L+T T+ Sbjct: 75 RIKAL-VIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLATETTIA 133 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +LI + + + + +L + EE + + +K ++ E D Sbjct: 134 SRAYHDLIIKNLPEAVVSTRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE------D 187 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 ++L CTH+P+ + L P V +D++ + A Sbjct: 188 AVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATA 221 >gi|253698914|ref|YP_003020103.1| glutamate racemase [Geobacter sp. M21] gi|251773764|gb|ACT16345.1| glutamate racemase [Geobacter sp. M21] Length = 278 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 9/215 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L++ Sbjct: 5 AIGIFDSGVGGLTVLKEVVRALPQEDTIYLGDTARVPYGTKSPETVVRYSRQIARYLLNR 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 +L V+ACNTA + L+ F S+ +G + P + AAA T+SG + ++ T AT+ Sbjct: 65 DIKLL-VVACNTASAVALSALQQEF-SIPIVGVIEPGARAAAAATKSGKVGVIGTAATVA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR-T 192 + + I + + + EE ++E+ + G ++E K Sbjct: 123 SSAYTKAIKRINPDIEVVNRACPLFVPLAEEGWV-----DNEVARLTAGIYLEDLKKHGV 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTHYP++ V ++ V +D+++ A Sbjct: 178 DTLVLGCTHYPILKDVIAEVMGPEVTLVDSAEQTA 212 >gi|297242787|ref|ZP_06926725.1| glutamate racemase [Gardnerella vaginalis AMD] gi|296888998|gb|EFH27732.1| glutamate racemase [Gardnerella vaginalis AMD] Length = 257 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 7/225 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L +I +FDSG+GG+ V +++ +P +Y D PYG +KK L F + Sbjct: 3 LSAAIGVFDSGLGGISVARQLHAALPHERIVYFGDSANAPYGIKTPEEVKK-LSFAIVEH 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTP 129 + VIACNTA + ++LR+ + ++ +G PA+K A +S + + +TP Sbjct: 62 FVRLNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGESQRVIVAATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TLR ++L+ + I L VE G D + + F E + Sbjct: 121 LTLRERKFADLLQRFSQNNTIFSQPCPDLVRIVER---GELNDRDVVFAALHKYFDEYDL 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+ FR+ P + +D ++ R +L Sbjct: 178 DSIDSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKIL 222 >gi|2462097|emb|CAA71858.1| glutamate racemase [Bacillus cereus ATCC 14579] Length = 258 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 174 KSTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 233 -SDHLFLTTGK 242 >gi|290579929|ref|YP_003484321.1| putative glutamate racemase [Streptococcus mutans NN2025] gi|254996828|dbj|BAH87429.1| putative glutamate racemase [Streptococcus mutans NN2025] Length = 264 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 8/226 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V++++ +P IY+ D PYG +K L + +L K + Sbjct: 9 LDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 69 I-VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIY 126 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 I Q + ++ VE K+ KK + GK D +VL Sbjct: 127 EQKILDLSPQMKVRSLACPKFVPIVESN----KMNSSVAKKIVYESLSPLVGK-IDTLVL 181 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 CTHYPL+ + + + V+ +D+ R LL + +++R Sbjct: 182 GCTHYPLLRPIIQNVMGPDVELIDSGAECVRDISVLLNYFDLNRSR 227 >gi|291299061|ref|YP_003510339.1| glutamate racemase [Stackebrandtia nassauensis DSM 44728] gi|290568281|gb|ADD41246.1| glutamate racemase [Stackebrandtia nassauensis DSM 44728] Length = 277 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 6/216 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GGL V + +R L+P +YV D PYG +++ + ++ Sbjct: 3 EAPIGIFDSGVGGLTVARAIRDLLPAERLLYVGDTARAPYGPRSIAQIRQYTLDACDYLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA + +LR F PA ++A T++G + ++ T AT+ Sbjct: 63 GQGVKAL-VIACNTASSASLADLRERFDVPVLEVIRPAARRAVTVTRNGRVGVIGTIATV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + HS S ++S+ + V+ G+ ++ +G + + Sbjct: 122 TSGAYGDAFHSAPSVT----LTSVACPAFVDFVERGVTTGR-QLLGLAQGYLEPLQRSQV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYPL+ + + V + +S+ AR Sbjct: 177 DTLVLGCTHYPLLAGLIGLVMGDEVTLVSSSEEAAR 212 >gi|253564140|ref|ZP_04841597.1| glutamate racemase [Bacteroides sp. 3_2_5] gi|251947916|gb|EES88198.1| glutamate racemase [Bacteroides sp. 3_2_5] gi|301161564|emb|CBW21104.1| putative glutamate racemase [Bacteroides fragilis 638R] Length = 280 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA T+ ++L + P LG + P + + TQ+ + IL+T Sbjct: 71 GCHLVILACNTASAKALRTIQMNDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ +H + + + VE + + I+K I+ + Sbjct: 131 GTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEASGEGADFFIRKYIDNLLAKD-- 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++ D +VL CTHYP+++ ++ P V + + +A + L R Sbjct: 189 RQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHR 235 >gi|284928811|ref|YP_003421333.1| glutamate racemase [cyanobacterium UCYN-A] gi|284809270|gb|ADB94975.1| glutamate racemase [cyanobacterium UCYN-A] Length = 281 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 25/234 (10%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +++YP I IFDSG+GGL V Q++ L+P+ +Y AD+ PYGN + Sbjct: 4 VNDYP--------IGIFDSGVGGLTVFQEIHKLLPQESILYFADNARLPYGNRSSTEI-- 53 Query: 63 RLMFLFSDILD--KYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYT 118 L F+ +IL+ Y V ++V+ACNT+ L + +R F + LG V P + A Y+ Sbjct: 54 -LQFV-REILNWMSYSKVKMAVMACNTSSALALEAVRKEF-NFPILGVVLPGARAATKYS 110 Query: 119 QS-GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 G+IS L+T + I+ + + + L R + Y EI Sbjct: 111 HRVGVISTLATAKSDSYRQAIQEINPNIKVWQVGCPELVPLIERDKIY----DFHTQEIL 166 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 K+ +EK D ++ CTHY + + + + P+ ++ +D + +A+ + Sbjct: 167 KKYINPLLEKN---IDTLIYGCTHYRHLEEIIKNIIPYKIELIDPAYYVAQSVK 217 >gi|146329274|ref|YP_001208944.1| glutamate racemase [Dichelobacter nodosus VCS1703A] gi|146232744|gb|ABQ13722.1| glutamate racemase [Dichelobacter nodosus VCS1703A] Length = 264 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 6/222 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG + + +P+ I+ AD+ PYG+ + + +L + Sbjct: 6 IGLFDSGVGGTSIWCAVCAELPQESTIFWADNAHAPYGDKSPAEIIELAARNTEQLLSRG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ +IACNTA LR+ + ++ F+ PAIK AA T++G + +L+T +TL Sbjct: 66 CKMI-IIACNTASAHAAAILRTRY-NVPFVAVEPAIKPAALATKTGAVGVLATTSTLMSA 123 Query: 136 YTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 N + +V +Q ++ L++ + E +++ ++ + + D Sbjct: 124 AFQNTVTRWVDTQKNVRLIARS--GRGIVELIESGQMESANMRALLAAHAQAFRAEHIDQ 181 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 +VL CTHYP + + ++L P V +D+ ++AR++R +L + Sbjct: 182 LVLGCTHYPYLRPLLQELLP-AVSIIDSGAAVARQSRRILAQ 222 >gi|295425843|ref|ZP_06818523.1| glutamate racemase [Lactobacillus amylolyticus DSM 11664] gi|295064446|gb|EFG55374.1| glutamate racemase [Lactobacillus amylolyticus DSM 11664] Length = 267 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 110/237 (46%), Gaps = 36/237 (15%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I + DSG GG V++K+ +PE I++ D+ PYG+ + Sbjct: 1 MDNRP--------IGLLDSGDGGFSVVKKVIKKLPEESTIFIGDNAHMPYGDKSKEEVIE 52 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQA 114 + + FL S + L + ACNTA + I+ E++ + G++ A++ Sbjct: 53 LTRHSVNFLLSRDVK-----LIIFACNTATAAAMSTIQKEIKPQIIGVIQSGSLAAVRT- 106 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKI 171 T++ +++ +TP T+ N I + + +++ LA VE +Y +++ Sbjct: 107 ---TENKKVAVSATPVTIASHAYKNEIQVRDPEIEVTELATPKLAPLVEAEEDYNTNLRV 163 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++ +K +GK D VL CTHYPLI F + P V +D +D +A+ Sbjct: 164 VKESLKP--------LQGKDFDTFVLGCTHYPLIQKEFEEALPDNVSIVDPADQVAQ 212 >gi|298386827|ref|ZP_06996382.1| glutamate racemase [Bacteroides sp. 1_1_14] gi|298260501|gb|EFI03370.1| glutamate racemase [Bacteroides sp. 1_1_14] Length = 280 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILNKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P LG + P ++ TQS I +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGDITQSRHIGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ IH + ++ + VE + + I+K I+ + Sbjct: 131 GTIKSESYPLEIHKLFPDIQVSGIACPMWVPLVENNESQNEGADYFIRKYIDQLL--SKD 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 D ++L CTHYP+++ ++ +P + + + +A + L R Sbjct: 189 PEIDTMILGCTHYPILLPKIQEYTPKHIRIVAQGEYVAESLKDYLSR 235 >gi|218296251|ref|ZP_03497007.1| glutamate racemase [Thermus aquaticus Y51MC23] gi|218243323|gb|EED09853.1| glutamate racemase [Thermus aquaticus Y51MC23] Length = 257 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 16/217 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL ++ +P+ F+Y D PYG+ + ++ +R + + L Sbjct: 5 KAPIGVFDSGVGGLTVLTALKKALPQEDFLYFGDTARVPYGS-KPLSVVRRFAWEIAGFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNTA + +L F PA + A Y + GLI +T + Sbjct: 64 LREGVKAIVVACNTASSAALPDLAEDLSVPVFGVLEPAAQVAQGYRKVGLIGTQATVGS- 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R Y + S+ C + + VEE + +D + I ++E+ + Sbjct: 123 -RAYERYVDLSWAKACPLFV-------PLVEE-----GLWDDPVALLIARHYLEEAPEDL 169 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + ++L CTHYP + Q+ P V +D++++ A R Sbjct: 170 EALILGCTHYPYLKRTIAQVLPG-VKLIDSAEATAGR 205 >gi|126348285|emb|CAJ90006.1| putative glutamate racemase [Streptomyces ambofaciens ATCC 23877] Length = 280 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 85/196 (43%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ I D G P+G L R + + + Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPEDLTGRALAVAE-AAAAH 80 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ CNTA LR+ F P++ +G VPAIK AAA G ++I +TPAT Sbjct: 81 RPDALIVGCNTATVHALPALRARFEPALPVIGTVPAIKPAAA--GGGPVAIWATPATTGS 138 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y +LI + + + V LA VE E I + G T Sbjct: 139 PYQRDLIERFGGEATVTEVPCPGLADAVEHA------DEAAITAAVAAAAALTPGDVT-T 191 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 192 VVLGCTHYELVAERIR 207 >gi|296331613|ref|ZP_06874082.1| glutamate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675428|ref|YP_003867100.1| glutamate racemase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151208|gb|EFG92088.1| glutamate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413672|gb|ADM38791.1| glutamate racemase [Bacillus subtilis subsp. spizizenii str. W23] Length = 271 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 7/248 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 LD + + VIACNTA + ++++ + + +G + P + A T++ I ++ T Sbjct: 61 LDNHHIKMLVIACNTATAIALEDIQRSV-GIPVVGVIQPGARAAIKVTENQHIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE K ++ +K + Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKT----SLYPLKDT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH Sbjct: 176 SIDTLILGCTHYPILKESIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIVPDHQ 235 Query: 250 LFLSGKPD 257 +G D Sbjct: 236 FLTTGARD 243 >gi|228967586|ref|ZP_04128610.1| Glutamate racemase [Bacillus thuringiensis serovar sotto str. T04001] gi|229081749|ref|ZP_04214242.1| Glutamate racemase [Bacillus cereus Rock4-2] gi|229129779|ref|ZP_04258746.1| Glutamate racemase [Bacillus cereus BDRD-Cer4] gi|229152686|ref|ZP_04280874.1| Glutamate racemase [Bacillus cereus m1550] gi|228630832|gb|EEK87473.1| Glutamate racemase [Bacillus cereus m1550] gi|228653695|gb|EEL09566.1| Glutamate racemase [Bacillus cereus BDRD-Cer4] gi|228701594|gb|EEL54087.1| Glutamate racemase [Bacillus cereus Rock4-2] gi|228792110|gb|EEM39688.1| Glutamate racemase [Bacillus thuringiensis serovar sotto str. T04001] Length = 274 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188 T++ + S ++ +V S+ VE G E E+ E+ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 179 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245 D ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 180 STDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 237 Query: 246 DDHALFLSGK 255 DH +GK Sbjct: 238 SDHLFLTTGK 247 >gi|194017293|ref|ZP_03055905.1| glutamate racemase [Bacillus pumilus ATCC 7061] gi|194011161|gb|EDW20731.1| glutamate racemase [Bacillus pumilus ATCC 7061] Length = 271 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 6/224 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ IYV D PYG ++ + + + + Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYVGDTKRCPYGPRKEEEVLQYTWEMAHYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + + VIACNTA + DE++ T + +G + P + A T + I ++ T Sbjct: 61 LRHHHIKMLVIACNTATAIALDEIKGTL-DIPVIGVIQPGARTAIKVTNNQQIGVIGTAN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + + ++ +L VE + ++ +K +E +++ G Sbjct: 120 TIKSEAYKEALLSLKAGLAVQSLACPLLVPFVESGTFLDQTADEVVKDSLEP--MKETG- 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYP++ ++ V + + D AR A +L Sbjct: 177 -IDTLILGCTHYPILKESIQRFMGSDVSIISSGDETAREASTIL 219 >gi|30022575|ref|NP_834206.1| glutamate racemase [Bacillus cereus ATCC 14579] gi|206969797|ref|ZP_03230751.1| glutamate racemase [Bacillus cereus AH1134] gi|218233554|ref|YP_002369290.1| glutamate racemase [Bacillus cereus B4264] gi|218899650|ref|YP_002448061.1| glutamate racemase [Bacillus cereus G9842] gi|228910317|ref|ZP_04074134.1| Glutamate racemase [Bacillus thuringiensis IBL 200] gi|229048200|ref|ZP_04193769.1| Glutamate racemase [Bacillus cereus AH676] gi|229072001|ref|ZP_04205211.1| Glutamate racemase [Bacillus cereus F65185] gi|229111955|ref|ZP_04241499.1| Glutamate racemase [Bacillus cereus Rock1-15] gi|229147053|ref|ZP_04275413.1| Glutamate racemase [Bacillus cereus BDRD-ST24] gi|229180762|ref|ZP_04308100.1| Glutamate racemase [Bacillus cereus 172560W] gi|229192695|ref|ZP_04319654.1| Glutamate racemase [Bacillus cereus ATCC 10876] gi|296504971|ref|YP_003666671.1| glutamate racemase [Bacillus thuringiensis BMB171] gi|226722979|sp|B7IIZ3|MURI_BACC2 RecName: Full=Glutamate racemase gi|226722980|sp|B7HEB5|MURI_BACC4 RecName: Full=Glutamate racemase gi|29898133|gb|AAP11407.1| Glutamate racemase [Bacillus cereus ATCC 14579] gi|206735485|gb|EDZ52653.1| glutamate racemase [Bacillus cereus AH1134] gi|218161511|gb|ACK61503.1| glutamate racemase [Bacillus cereus B4264] gi|218541324|gb|ACK93718.1| glutamate racemase [Bacillus cereus G9842] gi|228590785|gb|EEK48645.1| Glutamate racemase [Bacillus cereus ATCC 10876] gi|228602740|gb|EEK60223.1| Glutamate racemase [Bacillus cereus 172560W] gi|228636441|gb|EEK92911.1| Glutamate racemase [Bacillus cereus BDRD-ST24] gi|228671519|gb|EEL26819.1| Glutamate racemase [Bacillus cereus Rock1-15] gi|228711160|gb|EEL63125.1| Glutamate racemase [Bacillus cereus F65185] gi|228723187|gb|EEL74563.1| Glutamate racemase [Bacillus cereus AH676] gi|228849377|gb|EEM94214.1| Glutamate racemase [Bacillus thuringiensis IBL 200] gi|296326023|gb|ADH08951.1| glutamate racemase [Bacillus thuringiensis BMB171] Length = 269 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188 T++ + S ++ +V S+ VE G E E+ E+ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245 D ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 175 STDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 232 Query: 246 DDHALFLSGK 255 DH +GK Sbjct: 233 SDHLFLTTGK 242 >gi|228960759|ref|ZP_04122398.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798975|gb|EEM45950.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 269 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKKLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188 T++ + S ++ +V S+ VE G E E+ E+ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245 D ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 175 STDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 232 Query: 246 DDHALFLSGK 255 DH +GK Sbjct: 233 SDHLFLTTGK 242 >gi|121534586|ref|ZP_01666408.1| glutamate racemase [Thermosinus carboxydivorans Nor1] gi|121306838|gb|EAX47758.1| glutamate racemase [Thermosinus carboxydivorans Nor1] Length = 269 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 39/224 (17%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHAL 60 DN+P I + DSGIGGL V++++ LMP+ HFIY D PYG+ E Sbjct: 3 DNWP--------IGVCDSGIGGLTVVKELLELMPDEHFIYFGDTARIPYGDRPPAEILTF 54 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 ++++ F++ K + V+ACNT + D FP +G I+ A A ++S Sbjct: 55 MRQILRFFTEQKVK----MVVVACNTMTAVGLDMAWREFP-FPVVGVNTGIRSALAASRS 109 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G I +++T AT+ S H ++ + V AC + E ++++ Sbjct: 110 GRIGVIATQATV------------ASGLHERTAKAIDAKAVVALQACPKLVPLIE-REQL 156 Query: 181 EGCFIEK---------EGKRTDVIVLACTHYPLIVHVF-RQLSP 214 EG +E D ++L CTHYP I V R L P Sbjct: 157 EGPAVEAAVAEYLRPLRDAGVDALILGCTHYPFISPVISRYLGP 200 >gi|116626345|ref|YP_828501.1| glutamate racemase [Candidatus Solibacter usitatus Ellin6076] gi|116229507|gb|ABJ88216.1| glutamate racemase [Candidatus Solibacter usitatus Ellin6076] Length = 252 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VLQ +R +P+ F+YV D PYG + A+ +D L Sbjct: 2 IGVFDSGVGGLTVLQALRKRLPQREFLYVGDTARAPYGR-KPAAMVAGFACEIADYLCGR 60 Query: 76 QPVLSVIACNTAFTLIKDEL--RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL- 132 V+ACNTA + EL R P + A ++ A T++G I +++T AT+ Sbjct: 61 GVEAIVVACNTASAVALPELERRCKVPVWGVVDA--GVEAATRMTRTGHIGVIATRATIA 118 Query: 133 ----RRTYTSNLIHSYVSQCH--IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +R + + + +C +HLV + E E + ++ Sbjct: 119 SAAYQRRLEARGLRVWARECPMLVHLVEE--------------GLAESEEADVLSRHYLS 164 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D ++L CTHYPL+ ++ + V +D++ A R Sbjct: 165 GR-PEIDTLILGCTHYPLLRASLQRAAGGHVRLVDSASVTAER 206 >gi|295696096|ref|YP_003589334.1| glutamate racemase [Bacillus tusciae DSM 2912] gi|295411698|gb|ADG06190.1| glutamate racemase [Bacillus tusciae DSM 2912] Length = 285 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 15/195 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I ++DSG+GGL VL MPE+ ++Y D + PYG+ ++ + ++ + Sbjct: 3 IGMYDSGVGGLTVLAAFVRHMPEHDYVYFGDTLHAPYGDRTAEEVRALSLAAVKQLVARN 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +L V+ACNT+ ++ D L + +P + L + A+ A + I++L+T T+ Sbjct: 63 IDLL-VVACNTSASVAVDALVNHYPDLPVLTLLDAVGPAVRHLPGRKIALLATRRTVEAG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK----- 190 +HS + V++ L +E G+K + G F++ K Sbjct: 122 VFEARLHSARPDAAVRSVAAPALVPLIER---GVK------DPAVYGPFLDSYLKPLATW 172 Query: 191 RTDVIVLACTHYPLI 205 DV+VL CTHYPLI Sbjct: 173 GADVLVLGCTHYPLI 187 >gi|237785980|ref|YP_002906685.1| glutamate racemase [Corynebacterium kroppenstedtii DSM 44385] gi|259509812|sp|C4LJY7|MURI_CORK4 RecName: Full=Glutamate racemase gi|237758892|gb|ACR18142.1| Glutamate racemase [Corynebacterium kroppenstedtii DSM 44385] Length = 288 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 13/238 (5%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 ++NS I +FDSG+GGL V + + P +YV D PYG + + + D Sbjct: 1 MKNSPIGVFDSGVGGLTVARTIVDQAPTESIMYVGDTAHAPYGPKPREDIIRYSTAIADD 60 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 ++ + ++ VIACNTA ++ D+ R + + +G + PA ++A A T++G + ++ T Sbjct: 61 LVARGAKMI-VIACNTAASVFLDKARELY-DVPVVGVIEPASRRAVAATRNGRVGVIGTT 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ I + +H V VE GI +I E + Sbjct: 119 GTIASGAYQRCIANLDPNIEVHAVDCPQFVPFVER---GITTGR-QIMGLAEAYLEPLQD 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D +VL CTHYPL+ V + + V + +S+ + +PR+ +Q +F+D Sbjct: 175 VGVDTVVLGCTHYPLLTGVIQLVMGDNVTLVSSSEEEGKE----VPRV-LYQEDLFND 227 >gi|319758794|gb|ADV70736.1| glutamate racemase [Streptococcus suis JS14] Length = 264 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 18/257 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V +++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K ++ V ACNTA ++ +E++ + LG + P A TQ+G Sbjct: 53 YTWQVGNFLLTKNVKMI-VFACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T++ I + + + ++ A VE + + + K++ Sbjct: 111 KVGVLGTAMTIQSDIYREKIQALSPETQVDSLACPKFAPLVESNS-----HQSSLAKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + D +VL CTHYPL+ + + V +D+ AR LL ++ Sbjct: 166 YETLRPLVGQVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225 Query: 242 TRVFDD--HALFLSGKP 256 +R D H + + P Sbjct: 226 SRTEKDIQHRFYTTASP 242 >gi|238917207|ref|YP_002930724.1| glutamate racemase [Eubacterium eligens ATCC 27750] gi|259509814|sp|C4Z114|MURI_EUBE2 RecName: Full=Glutamate racemase gi|238872567|gb|ACR72277.1| glutamate racemase [Eubacterium eligens ATCC 27750] Length = 265 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 8/218 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL VL + MPE +I+ AD PYG ++K + ++DK Sbjct: 3 IGIFDSGIGGLSVLHQAMITMPEADYIFYADVDNVPYGEKTREEVRKLVDHAVGFLVDKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSG-LISILSTPATLR 133 + V+ACNTA + LR + + +G PA+K A +T ++G + ++STP T + Sbjct: 63 CQAI-VLACNTATSAAISYLREKY-KLPIIGIEPAVKPAVEHTSETGRRVMVVSTPVTAK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 LI Y + H+V + L V +A ++ ++ F Sbjct: 121 GEKLKRLIDKYDDK---HVVDVVALPKLV-RFAQDDDFDSSDVTDYLKCEFAPYNLNDYS 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +VL CTH+ F +L P ++ +D + ++ + Sbjct: 177 ELVLGCTHFNYFKDSFAKLFPDDLEMVDGNTGVSNNLK 214 >gi|53711792|ref|YP_097784.1| glutamate racemase [Bacteroides fragilis YCH46] gi|52214657|dbj|BAD47250.1| glutamate racemase [Bacteroides fragilis YCH46] Length = 280 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA T+ ++L + P LG + P + + TQ+ + IL+T Sbjct: 71 GCHLVILACNTASAKALRTIQINDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ +H + + + VE + + I+K I+ + Sbjct: 131 GTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEANSEGADFFIRKYIDNLLAKD-- 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++ D +VL CTHYP+++ ++ P V + + +A + L R Sbjct: 189 RQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHR 235 >gi|222152578|ref|YP_002561753.1| glutamate racemase [Streptococcus uberis 0140J] gi|254766128|sp|B9DTR9|MURI_STRU0 RecName: Full=Glutamate racemase gi|222113389|emb|CAR41037.1| glutamate racemase [Streptococcus uberis 0140J] Length = 264 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 18/258 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +YV D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHESIVYVGDSARAPYGPRPADQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ V ACNTA + +E+++ S+ LG + P A T SG Sbjct: 53 FTWELVNFLLTKNVKMI-VFACNTATAVAWEEVKNAL-SIPVLGVILPGSSAAIKSTTSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T++ I Q + ++ VE + + K+I Sbjct: 111 KVGVIGTPMTIQSDIYRQKIQLLAPQIEVLSLACPKFVPIVESNET-----KSSVAKKIV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINT 239 +E + D +VL CTHYPL+ + + + V +D+ R LL +IN Sbjct: 166 YETLEPLVGKVDTLVLGCTHYPLLRPIIQNVMGSEVTLIDSGAECIRDISVLLNYFQINA 225 Query: 240 HQTRVFDDHALFLSGKPD 257 + D+ F + D Sbjct: 226 SREEKKADNLFFTTAGTD 243 >gi|172058162|ref|YP_001814622.1| glutamate racemase [Exiguobacterium sibiricum 255-15] gi|229486273|sp|B1YJW7|MURI_EXIS2 RecName: Full=Glutamate racemase gi|171990683|gb|ACB61605.1| glutamate racemase [Exiguobacterium sibiricum 255-15] Length = 271 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 25/233 (10%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + SI + DSG+GGL V +++ +P IYV D + PYG + +++ + D Sbjct: 1 MNRSIGVLDSGVGGLTVARELMRQLPHEQIIYVGDTLRCPYGPRPEEEIRQ-FTWEMIDF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L L VIACNTA ++ E R S+ +G + P + A T+S I ++ T Sbjct: 60 LVAQGVKLIVIACNTATAVVLKEARQKL-SIPVIGVIDPGARAAVKVTRSKRIGVIGTKM 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + Q + +S VE + G ++E+ Sbjct: 119 TIESNSYEKALRHVEGQVVVESLSCPPFVPLVE-------------SSQTSGPYVERVVA 165 Query: 191 RT---------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 T D ++L CTHYPL+ V ++ V + + D A LL Sbjct: 166 NTLKPLLSYDMDTLILGCTHYPLLAEVIGRVIGPNVQLISSGDETALEVSALL 218 >gi|325963803|ref|YP_004241709.1| glutamate racemase [Arthrobacter phenanthrenivorans Sphe3] gi|323469890|gb|ADX73575.1| glutamate racemase [Arthrobacter phenanthrenivorans Sphe3] Length = 332 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 42/249 (16%) Query: 3 IDNYPCEKKLQNS------ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56 I P LQ + I +FDSG+GGL V + + +P +YV D PYG Sbjct: 7 IAAAPATGGLQAAAVESRPIGVFDSGVGGLTVARSIIDQLPNESILYVGDTAHGPYGPLP 66 Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIK 112 ++ + + +++D +L+ IACN+A + + R + + + + PA++ Sbjct: 67 IAEVRANALGVMDELVDSGVKLLT-IACNSASAAVLRDARERYTAKYGIPVIEVIQPAVR 125 Query: 113 QAAAYTQSGLISILSTPATL-RRTY------------TSNLIHSYVSQCHIHLVSSMILA 159 +A A T+SG + ++ T AT+ R Y TS +VS + + L Sbjct: 126 RAVAATRSGRVGVIGTSATIGSRAYEDTFAAAPDLAITSVACPEFVSYVEAGITTGPALL 185 Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 + EEY +K D +VL CTHYPL+ V + V Sbjct: 186 AVAEEYLAPLK------------------AAGVDTVVLGCTHYPLLTGVISYVMGADVTL 227 Query: 220 LDNSDSIAR 228 + +++ A+ Sbjct: 228 VSSAEETAK 236 >gi|229169224|ref|ZP_04296938.1| Glutamate racemase [Bacillus cereus AH621] gi|228614290|gb|EEK71401.1| Glutamate racemase [Bacillus cereus AH621] Length = 270 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 3 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 63 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 121 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 174 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 175 KSTDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQ- 233 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 234 -SDHLFLTTGK 243 >gi|167628589|ref|YP_001679088.1| glutamate racemase, putative [Heliobacterium modesticaldum Ice1] gi|167591329|gb|ABZ83077.1| glutamate racemase, putative [Heliobacterium modesticaldum Ice1] Length = 284 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 11/224 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +++ MP +Y AD PYG L R +D L Sbjct: 7 IGIFDSGVGGLTVAREVFRQMPGEEILYFADTAHVPYGPRPASEL-IRFALEITDFLVAE 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L ++ACNT+ +L D +R P ++A +++G I +L+T AT+R+ Sbjct: 66 GAKLILVACNTSSSLALDIIRERHKVPVVGVVDPGAEEAVRLSRNGRIGVLATEATIRKG 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEKEGKRT 192 S + S + + VE + DE + K+ IE Sbjct: 126 AHSRRVGELNSAMQVFGQACPRFVPLVESG----RYSGDEARAASKQYLAPLIEAG---V 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 D IVL CTHYP + V R++ + +D + + + L+ R Sbjct: 179 DTIVLGCTHYPFLEPVIREVIGEKITLIDPACQTVAQGKALMER 222 >gi|229019709|ref|ZP_04176516.1| Glutamate racemase [Bacillus cereus AH1273] gi|229027350|ref|ZP_04183605.1| Glutamate racemase [Bacillus cereus AH1272] gi|228733958|gb|EEL84697.1| Glutamate racemase [Bacillus cereus AH1272] gi|228741616|gb|EEL91809.1| Glutamate racemase [Bacillus cereus AH1273] Length = 274 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 179 KSTDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 238 -SDHLFLTTGK 247 >gi|29349130|ref|NP_812633.1| glutamate racemase [Bacteroides thetaiotaomicron VPI-5482] gi|29341037|gb|AAO78827.1| glutamate racemase [Bacteroides thetaiotaomicron VPI-5482] Length = 280 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R +PEY ++Y+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILNKIREALPEYDYVYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P LG + P ++ TQS I +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGGITQSRHIGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ IH + ++ + VE + + I+K I+ + Sbjct: 131 GTIKSESYPLEIHKLFPDIQVSGMACPMWVPLVENNESQNEGADYFIRKYIDQLL--SKD 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 D ++L CTHYP+++ ++ +P + + + +A + L R Sbjct: 189 PEIDTMILGCTHYPILLPKIQEYTPKHIRIVAQGEYVAESLKDYLSR 235 >gi|253571293|ref|ZP_04848700.1| glutamate racemase [Bacteroides sp. 1_1_6] gi|251839246|gb|EES67330.1| glutamate racemase [Bacteroides sp. 1_1_6] Length = 280 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILNKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P LG + P ++ TQS I +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGDITQSRHIGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ IH + ++ + VE + + I+K I+ + Sbjct: 131 GTIKSESYPLEIHKLFPDIQVSGIACPMWVPLVENNESQNEGADYFIRKYIDQLL--SKD 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 D ++L CTHYP+++ ++ +P + + + +A + L R Sbjct: 189 PEIDTMILGCTHYPILLPKIQKYTPKHIRIVAQGEYVAESLKDYLSR 235 >gi|229013698|ref|ZP_04170827.1| Glutamate racemase [Bacillus mycoides DSM 2048] gi|228747620|gb|EEL97494.1| Glutamate racemase [Bacillus mycoides DSM 2048] Length = 274 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 179 KSTDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 238 -SDHLFLTTGK 247 >gi|255037214|ref|YP_003087835.1| glutamate racemase [Dyadobacter fermentans DSM 18053] gi|254949970|gb|ACT94670.1| glutamate racemase [Dyadobacter fermentans DSM 18053] Length = 269 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 7/223 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGG+ V + L+P+ + IY D PYG+ A++ + + + +L + Sbjct: 8 IGIFDSGIGGMTVASAVTKLLPQENTIYFGDTAHLPYGDKSTAAIQAYSIKICNMLLQQ- 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV--PAIKQAAAYTQSGLISILSTPATLR 133 L +IACN+A + +R S A + V P + + + I ++ T T+ Sbjct: 67 NCKLILIACNSASAAAYELVREYVGSKAKVLNVIDPVVDYVKEHYEGKTIGLIGTKQTVL 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + H+ +++ +LA +EE I E I + ++ + Sbjct: 127 SNVYKKKVDALDRNIHLKSLATPLLAPMIEEGFFDNNISESVIANYLSDASLDG----IE 182 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++L CTHYPLI R+ ++ LD S+ +AR + L + Sbjct: 183 ALILGCTHYPLIKTQIRKFYGEAIETLDTSEIVARSLKAWLEQ 225 >gi|312135723|ref|YP_004003061.1| glutamate racemase [Caldicellulosiruptor owensensis OL] gi|311775774|gb|ADQ05261.1| glutamate racemase [Caldicellulosiruptor owensensis OL] Length = 267 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 93/203 (45%), Gaps = 13/203 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+ Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDIPIVAVIE--PGAEAAVRATKNKKIGVIGTEGTIA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191 I S + + VEE G KE + KE FIEKE Sbjct: 123 SGSFEKKILELDSSIKVFSKPCPLFVPLVEE---GWTDKEVTYLVAKEYLEEFIEKE--- 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 D +VL CTHYP + V +++ P Sbjct: 177 IDTLVLGCTHYPFLQDVIKKVLP 199 >gi|229062177|ref|ZP_04199501.1| Glutamate racemase [Bacillus cereus AH603] gi|228717160|gb|EEL68836.1| Glutamate racemase [Bacillus cereus AH603] Length = 274 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 179 KSTDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNDGEEQ- 237 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 238 -SDHLFLTTGK 247 >gi|171780258|ref|ZP_02921162.1| hypothetical protein STRINF_02046 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281606|gb|EDT47041.1| hypothetical protein STRINF_02046 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 269 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 18/255 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ V ACNTA + E++ + LG + P A T++G Sbjct: 53 YTWELVNFLLTKNVKMI-VFACNTATAVAWKEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I I+ TP T+ I S + + ++ VE G + KK + Sbjct: 111 KIGIIGTPMTINSEVYPEKIKSLSPKMEVSGLACSKFVPIVESNEMGSSVA----KKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 ESLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINH 225 Query: 240 HQTRVFDDHALFLSG 254 +T DH + + Sbjct: 226 SRTENAVDHHFYTTA 240 >gi|297620368|ref|YP_003708505.1| Glutamate racemase [Waddlia chondrophila WSU 86-1044] gi|297375669|gb|ADI37499.1| Glutamate racemase [Waddlia chondrophila WSU 86-1044] Length = 276 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 6/221 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N+I +FDSG+GGL V++ + +P+ IY D PYG + + + + +L Sbjct: 2 NAIAVFDSGLGGLTVVKALCEHLPQEEIIYFGDTARVPYGGKSRETVIRYAREISAFLLS 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VI CNTA D L + F P I++ +A Q+ I++L T AT+R Sbjct: 62 QEIKAL-VIGCNTASAYAADLLAAELELPVFNVIDPLIEEISA-CQAEHIAVLGTAATVR 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + +S + VEE+ + +E + +R D Sbjct: 120 SGIYQARLAQKIPNVKVTGISCPLFVPIVEEHF----QNHPAARLIVEEYLFRVKDERMD 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTHYPL+ + R+ V +D++ + A++ + L Sbjct: 176 TVVLGCTHYPLLYCLIREYLGDEVRIVDSASACAKQIQAAL 216 >gi|153815937|ref|ZP_01968605.1| hypothetical protein RUMTOR_02182 [Ruminococcus torques ATCC 27756] gi|145846756|gb|EDK23674.1| hypothetical protein RUMTOR_02182 [Ruminococcus torques ATCC 27756] Length = 279 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD----ILD 73 +FDSG+GGL V +++ +P + +Y D PYG+ + + + FS+ L Sbjct: 17 VFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTIIR-----FSEQIIRFLK 71 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 Q VIACNTA L D +R F P M + +P + A T++ + ++ T AT Sbjct: 72 TKQVKAIVIACNTASALALDAVRDEFDIPIMGVV--IPGARAAVETTRNQKVGVIGTDAT 129 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190 ++ + +I S + + + VEE KE + +E+ ++E Sbjct: 130 VQSGMYTKVIQSMAPDIEVIEKACPLFVPLVEE-----GFKEHVVTEEVIEYYLESMRHT 184 Query: 191 RTDVIVLACTHYPLI 205 + D ++L CTHYPL+ Sbjct: 185 QIDAMILGCTHYPLL 199 >gi|309805303|ref|ZP_07699354.1| glutamate racemase [Lactobacillus iners LactinV 09V1-c] gi|312875202|ref|ZP_07735215.1| glutamate racemase [Lactobacillus iners LEAF 2053A-b] gi|308165379|gb|EFO67611.1| glutamate racemase [Lactobacillus iners LactinV 09V1-c] gi|311089309|gb|EFQ47740.1| glutamate racemase [Lactobacillus iners LEAF 2053A-b] Length = 261 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 29/261 (11%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW--EDHAL 60 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119 R F +L K V+ + CNTA ++ P M +G + + AA+ TQ Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK---EDEI 176 + +++++T AT+ HSYV + I ++ I + + E ++ DEI Sbjct: 109 TNQVAVIATNATVNS-------HSYVKE--IAFRNAQIQVTELGEPKLAPLVEANPSDEI 159 Query: 177 KKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 KK + C + + D ++L CTHYPL++ + +D +D +A+ +L Sbjct: 160 KKAVVAQCLAPLKHVQYDTLILGCTHYPLLIREIAEFIGKDKKIVDPADQVAQYTFNVLK 219 Query: 236 RINTHQTRVFDDHALFLSGKP 256 R N + H + +G P Sbjct: 220 RDNLLAAK-GGKHEYYTTGDP 239 >gi|34496658|ref|NP_900873.1| glutamate racemase [Chromobacterium violaceum ATCC 12472] gi|34102513|gb|AAQ58878.1| glutamate racemase [Chromobacterium violaceum ATCC 12472] Length = 256 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 6/219 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 ++DSG+GGL V + +R +P++ Y+AD PYG + R + + ++ + Sbjct: 1 MYDSGLGGLSVWRAVRAALPDWPITYLADQAYCPYGPRSREEIIARALKVGHYLVSQGAT 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 +L V I S+ +G PAIK AAA +++G I++L+T TL Sbjct: 61 LLVVACNTATTAAIAALRAEL--SLPIVGIEPAIKPAAAMSRTGRIAVLATEYTLASERV 118 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L+ + + + +VE + ++K +E E D I L Sbjct: 119 KTLLDDHAGDVDVLRRAGHGWVEQVEAGELSSERTRALVRKVVEPLIDEN----IDHIAL 174 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 CTHYP + + R+++ + D +++IARR LL R Sbjct: 175 GCTHYPFLAPLIREVTGDGIQLYDPAEAIARRVCDLLRR 213 >gi|297195902|ref|ZP_06913300.1| glutamate racemase [Streptomyces pristinaespiralis ATCC 25486] gi|297152990|gb|EFH32086.1| glutamate racemase [Streptomyces pristinaespiralis ATCC 25486] Length = 270 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 85/196 (43%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + R + + + Sbjct: 12 IALMDSGIGLLAAAAVVRTLRPDADLVLSSDPGSMPWGPRTPDDVAGRALTVAR-AAAAH 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ PS+ +G VPAIK AAA G ++I +TPAT Sbjct: 71 KPDALIVACNTASVHALPALRAELEPSIPVIGTVPAIKPAAA--GGGPVAIWATPATTGS 128 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE + +D I + + + Sbjct: 129 PYQRGLIKEFAGSVEVTEVPCPGLADAVE------RADKDAIDRAVAAAAALTP-RDVRA 181 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 182 VVLGCTHYELVSERIR 197 >gi|331089823|ref|ZP_08338716.1| glutamate racemase [Lachnospiraceae bacterium 3_1_46FAA] gi|330403520|gb|EGG83078.1| glutamate racemase [Lachnospiraceae bacterium 3_1_46FAA] Length = 275 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 17/194 (8%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD----ILD 73 +FDSG+GGL V +++ +P + +Y D PYG+ + + + FS+ L Sbjct: 13 VFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTIIR-----FSEQIIRFLK 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 Q VIACNTA L D +R F + +G V P + A T++ + ++ T AT+ Sbjct: 68 TKQVKAIVIACNTASALALDAVRDEF-DIPIMGVVIPGARAAVETTRNQKVGVIGTDATV 126 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191 + + +I S + + + VEE KE + +E+ ++E + Sbjct: 127 QSGMYTKVIQSMAPDIEVIEKACPLFVPLVEE-----GFKEHVVTEEVIEYYLESMRHTQ 181 Query: 192 TDVIVLACTHYPLI 205 D ++L CTHYPL+ Sbjct: 182 IDAMILGCTHYPLL 195 >gi|317500702|ref|ZP_07958920.1| glutamate racemase [Lachnospiraceae bacterium 8_1_57FAA] gi|316897896|gb|EFV19949.1| glutamate racemase [Lachnospiraceae bacterium 8_1_57FAA] Length = 273 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 17/194 (8%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD----ILD 73 +FDSG+GGL V +++ +P + +Y D PYG+ + + + FS+ L Sbjct: 11 VFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTIIR-----FSEQIIRFLK 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 Q VIACNTA L D +R F + +G V P + A T++ + ++ T AT+ Sbjct: 66 TKQVKAIVIACNTASALALDAVRDEF-DIPIMGVVIPGARAAVETTRNQKVGVIGTDATV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191 + + +I S + + + VEE KE + +E+ ++E + Sbjct: 125 QSGMYTKVIQSMAPDIEVIEKACPLFVPLVEE-----GFKEHVVTEEVIEYYLESMRHTQ 179 Query: 192 TDVIVLACTHYPLI 205 D ++L CTHYPL+ Sbjct: 180 IDAMILGCTHYPLL 193 >gi|309802168|ref|ZP_07696277.1| glutamate racemase [Bifidobacterium dentium JCVIHMP022] gi|308221248|gb|EFO77551.1| glutamate racemase [Bifidobacterium dentium JCVIHMP022] Length = 258 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 7/221 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++R MP +Y D PYG ++ L F + + Sbjct: 7 IGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTRTPKQVRD-LSFAIVERFVQQ 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133 VIACNTA + D LR + + +G PA+K A Q + + +TP TLR Sbjct: 66 GAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLTLR 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ + S H + VE G D + + + F + D Sbjct: 125 ERKFAVLMDRFKSD---HTIFPQPCPGLVEIVEQGRLDDHDLVMRTLHDYFDRYDLSTID 181 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+ FR+L P +D + R +L Sbjct: 182 SVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVL 222 >gi|74317540|ref|YP_315280.1| glutamate racemase [Thiobacillus denitrificans ATCC 25259] gi|74057035|gb|AAZ97475.1| glutamate racemase [Thiobacillus denitrificans ATCC 25259] Length = 265 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 10/223 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSGIGGL V++ + +P + +Y D PYG + + +L Sbjct: 6 HSPIGVFDSGIGGLTVVRALMERLPYENIVYFGDTARVPYGVKSVETIAHFTTQIAQFLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPAT 131 +K +L VIACNT + ++ P + + I AA + G I ++ TP T Sbjct: 66 EKDVKLL-VIACNTMAAVAAQVVKDLSP----VPVLDVIDAGAASARGGKKIGVIGTPTT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH Y IH + + VEE ++ + ++ E Sbjct: 121 INSNAYARAIHDYAPDSRIHSQACPLFVPLVEEGWLDNEVTRLTAQDYMKPLLAE----H 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYPL+ + R++ V +D+++++A + +L Sbjct: 177 IDTLVLGCTHYPLLKPLLREVVGDGVALVDSAEAMAEQVAAVL 219 >gi|331086725|ref|ZP_08335802.1| glutamate racemase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330409891|gb|EGG89326.1| glutamate racemase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 278 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 12/212 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKI+N K I +FDSG+GGL V +++ +P +Y D PYG+ + + Sbjct: 1 MKIEN-----KKDMPIGVFDSGVGGLTVAREIMRQLPNESIVYFGDTARVPYGSKSETTI 55 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + +L K + VIACNTA L D +R F + +G V P + A T Sbjct: 56 IRYSRQIIRFLLTKEVKAI-VIACNTASALALDAVRKEF-KIPIIGVVAPGARAAREETI 113 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I ++ T AT++ LI + Q + + + VEE KI ++ Sbjct: 114 NKKIGVIGTEATVKSEIYKKLIQAEDPQISVSGRACPLFVPLVEEGFAKHKI----TREV 169 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 I+ + D ++L CTHYPL+ R+ Sbjct: 170 IDIYLSDMRESDIDTLILGCTHYPLLRSTIRE 201 >gi|306822342|ref|ZP_07455721.1| glutamate racemase [Bifidobacterium dentium ATCC 27679] gi|304554340|gb|EFM42248.1| glutamate racemase [Bifidobacterium dentium ATCC 27679] Length = 262 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 7/221 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++R MP +Y D PYG ++ L F + + Sbjct: 11 IGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTRTPKQVRD-LSFAIVERFVQQ 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133 VIACNTA + D LR + + +G PA+K A Q + + +TP TLR Sbjct: 70 GAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLTLR 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ + S H + VE G D + + + F + D Sbjct: 129 ERKFAVLMDRFKSD---HTIFPQPCPGLVEIVEQGRLDDHDLVMRTLHDYFDRYDLSTID 185 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+ FR+L P +D + R +L Sbjct: 186 SVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVL 226 >gi|170782455|ref|YP_001710788.1| glutamate racemase [Clavibacter michiganensis subsp. sepedonicus] gi|169157024|emb|CAQ02197.1| glutamate racemase 1 [Clavibacter michiganensis subsp. sepedonicus] Length = 294 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 14/194 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + L+P IY+ D PYG+ +++ + + D++++ Sbjct: 6 IGIFDSGVGGLTVARAVAALLPRESIIYIGDTAHTPYGDKPIADVRRYALAVLDDLVERG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134 +L VIACNTA + + R + PA++ A + T++ + +++T AT+ R Sbjct: 66 VKML-VIACNTASAAMLRDARERYDIPVVEVIQPAVRTAVSVTRNHRVGVIATHATVTSR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEKEGKR 191 Y ++ + H+ L S + ++ ++ E E+ EG Sbjct: 125 AYDD----AFAAAPHLALTS-----AEAPDFVGFVERGETSGPELMSAAEGYLAPLRAAG 175 Query: 192 TDVIVLACTHYPLI 205 D +VL CTHYP + Sbjct: 176 VDTLVLGCTHYPFL 189 >gi|225872661|ref|YP_002754118.1| glutamate racemase [Acidobacterium capsulatum ATCC 51196] gi|225792605|gb|ACO32695.1| glutamate racemase [Acidobacterium capsulatum ATCC 51196] Length = 276 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 31/222 (13%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL+ + +P+ F+Y D PYG + R ++ L + Sbjct: 11 IGVFDSGFGGLTVLRALLRELPQAEFLYFGDTARLPYGAKSRETI-ARYAVSAAEFLVRQ 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRR 134 VIACNTA L D+LR+ + LG V AA A++ SG + +++T AT+ Sbjct: 70 GAEYLVIACNTASALALDDLRAAL-DIPVLGVVETGANAAQAHSHSGDVLVIATAATVES 128 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------EDEIKKEIEGCFIEK 187 H+Y + C + R E AC + + + + +E+ + + Sbjct: 129 -------HAYATACAERNL-------RAVEKACPLLVPLVEEGWIDHPVTREVLSIYFTE 174 Query: 188 EGKRT-------DVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 ++ D ++L CTHYPL+ Q P + +D+ Sbjct: 175 LMHQSKAAALAPDTLLLGCTHYPLLREPIEQAIPAQIRVIDS 216 >gi|328946845|gb|EGG40982.1| glutamate racemase [Streptococcus sanguinis SK1087] Length = 264 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + K++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|324993660|gb|EGC25579.1| glutamate racemase [Streptococcus sanguinis SK405] gi|324995028|gb|EGC26941.1| glutamate racemase [Streptococcus sanguinis SK678] gi|327462929|gb|EGF09250.1| glutamate racemase [Streptococcus sanguinis SK1] gi|327474533|gb|EGF19938.1| glutamate racemase [Streptococcus sanguinis SK408] gi|332359127|gb|EGJ36948.1| glutamate racemase [Streptococcus sanguinis SK49] gi|332362249|gb|EGJ40049.1| glutamate racemase [Streptococcus sanguinis SK1056] Length = 264 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + K++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|125974438|ref|YP_001038348.1| glutamate racemase [Clostridium thermocellum ATCC 27405] gi|256005209|ref|ZP_05430177.1| glutamate racemase [Clostridium thermocellum DSM 2360] gi|281418963|ref|ZP_06249981.1| glutamate racemase [Clostridium thermocellum JW20] gi|125714663|gb|ABN53155.1| glutamate racemase [Clostridium thermocellum ATCC 27405] gi|255990863|gb|EEU00977.1| glutamate racemase [Clostridium thermocellum DSM 2360] gi|281407420|gb|EFB37680.1| glutamate racemase [Clostridium thermocellum JW20] gi|316941574|gb|ADU75608.1| glutamate racemase [Clostridium thermocellum DSM 1313] Length = 268 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 113/244 (46%), Gaps = 23/244 (9%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSG+GGL VL++++ L+P +Y D PYG+ + K Sbjct: 1 MDNRP--------IGVFDSGLGGLTVLKEIKNLLPRESIVYFGDSGRAPYGSKSKETVVK 52 Query: 63 RLMFLFSDI--LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYT 118 + F DI L + VIACNTA D+++++F P + +G P A T Sbjct: 53 ---YTFQDIRFLLNQDIKMIVIACNTASACSLDQVKNSFDIPIVEVVG--PGAATAVRET 107 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 + + ++ T AT+ I + I+ + + VEE E++I Sbjct: 108 VNKKVGVIGTVATVSSGVYEKAILKLDPEIEIYQKACPLFVPLVEEGWW-----ENDIAL 162 Query: 179 EI-EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 I E + + K D +VL CTHYPL+ + ++ V + ++ +A+ + ++ + Sbjct: 163 RIAEEYLLPLKEKNIDTLVLGCTHYPLLYNTISKVMGDGVKLVSSALEVAKVVKEMIEKS 222 Query: 238 NTHQ 241 N ++ Sbjct: 223 NLNR 226 >gi|163781564|ref|ZP_02176564.1| glutamate racemase [Hydrogenivirga sp. 128-5-R1-1] gi|159882784|gb|EDP76288.1| glutamate racemase [Hydrogenivirga sp. 128-5-R1-1] Length = 255 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 15/220 (6%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+ +R P Y+ D PYG + + + + +K Sbjct: 5 VFDSGVGGLTVLKAIREKFPRIDLFYLGDTARVPYGTKSPDTVIRYSVECAEFLSEKSVD 64 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 VL V+ACNTA + + L S ++ LG V P +++A + T+ G + ++ T AT+R Sbjct: 65 VL-VVACNTASSYALETLTSML-TIPVLGVVEPGVRKALSLTK-GRVGVIGTSATIR--- 118 Query: 137 TSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 S + + + + S + VEE G+ ++ D ++ +E E K D Sbjct: 119 -SEAYQHRLREAGVEVFSKACPLFVPLVEE---GL-VEGDITERVVEFYLKEFREKGIDT 173 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++L CTHYPL+ + + + +D+SD++A L+ Sbjct: 174 LILGCTHYPLLKNTIKNFLKG-TEVVDSSDAVAEELSSLV 212 >gi|291550542|emb|CBL26804.1| glutamate racemase [Ruminococcus torques L2-14] Length = 273 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 17/202 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V +++ +P + +Y D PYG+ + + + FS+ + ++ Sbjct: 9 IGVFDSGVGGLTVAREISRQLPYENIVYFGDTARVPYGSKSQNTIIR-----FSEQIIRF 63 Query: 76 ----QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 Q VIACNTA L D ++ F + +G V P + A T +G + ++ T A Sbjct: 64 LRTKQVKAIVIACNTASALALDAVKDEF-DLPIIGVVIPGARAAVEATTNGKVGVVGTEA 122 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189 T++ + +I + + + + VEE KE + +EI ++E Sbjct: 123 TVQSGMYTKVIQGMNPKIEVIEKACPLFVPLVEE-----GFKEHIVTREIIEYYLESMRN 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQ 211 D ++L CTHYPL+ R+ Sbjct: 178 TDIDAMILGCTHYPLLRSKIRE 199 >gi|167760730|ref|ZP_02432857.1| hypothetical protein CLOSCI_03115 [Clostridium scindens ATCC 35704] gi|167661617|gb|EDS05747.1| hypothetical protein CLOSCI_03115 [Clostridium scindens ATCC 35704] Length = 281 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 15/203 (7%) Query: 9 EKKLQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALK-KRL 64 E +N+ + +FDSG+GGL V +++ +P + +Y D PYG+ D+ ++ R Sbjct: 10 ENNRENTAPVGVFDSGVGGLTVAREIMRQLPMENVVYFGDTARVPYGSKSRDNIIRFSRQ 69 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGL 122 + F L+ VIACNTA L D ++ + P + +G P + A T++G Sbjct: 70 IIRF---LETKNVKAIVIACNTASALALDTVQKETDVPVIGVIG--PGARAAVKETRNGQ 124 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I ++ T AT++ + +IHS + + + VEE KI E+ I + Sbjct: 125 IGVVGTEATIQSETYTKVIHSLNPEASVIGKPCPLFVPLVEEGFAKHKITEEAIDFYLS- 183 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 + + + D ++L CTHYPL+ Sbjct: 184 ---DMKSTQIDTMILGCTHYPLL 203 >gi|283456482|ref|YP_003361046.1| glutamate racemase [Bifidobacterium dentium Bd1] gi|283103116|gb|ADB10222.1| MurI Glutamate racemase [Bifidobacterium dentium Bd1] Length = 258 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 7/221 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++R MP +Y D PYG ++ L F + + Sbjct: 7 IGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTKTPKQVRD-LSFAIVERFVQQ 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133 VIACNTA + D LR + + +G PA+K A Q + + +TP TLR Sbjct: 66 GAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLTLR 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ + S H + VE G D + + + F + D Sbjct: 125 ERKFAVLMDRFKSD---HTIFPQPCPGLVEIVEQGRLDDHDLVMRTLHDYFDRYDLSTID 181 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+ FR+L P +D + R +L Sbjct: 182 SVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVL 222 >gi|171742432|ref|ZP_02918239.1| hypothetical protein BIFDEN_01543 [Bifidobacterium dentium ATCC 27678] gi|171278046|gb|EDT45707.1| hypothetical protein BIFDEN_01543 [Bifidobacterium dentium ATCC 27678] Length = 262 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 7/221 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++R MP +Y D PYG ++ L F + + Sbjct: 11 IGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTKTPKQVRD-LSFAIVERFVQQ 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133 VIACNTA + D LR + + +G PA+K A Q + + +TP TLR Sbjct: 70 GAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLTLR 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ + S H + VE G D + + + F + D Sbjct: 129 ERKFAVLMDRFKSD---HTIFPQPCPGLVEIVEQGRLDDHDLVMRTLHDYFDRYDLSTID 185 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VL CTH+ FR+L P +D + R +L Sbjct: 186 SVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVL 226 >gi|294789006|ref|ZP_06754246.1| glutamate racemase [Simonsiella muelleri ATCC 29453] gi|294483108|gb|EFG30795.1| glutamate racemase [Simonsiella muelleri ATCC 29453] Length = 272 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 12/248 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL V++ + +P + +Y D PYG + +++ + +L Sbjct: 9 EKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTIEEFTAQIVEFLL 68 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 L VIACNT + ++ +M + + A QAA A T++ I +++T T Sbjct: 69 QNEVKAL-VIACNTIAAVAYKRVQQMVGNMPIISVIEAGAQAALATTRNNHIGVIATSTT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH+ I +S IL VEE ++ +++ ++ E Sbjct: 128 VNSNAYARAIHAQNPDTRILSQASPILVPLVEEGWLDHEVTRLTVREYLKPILAED---- 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR-RARCLLPR--INTHQTRVFDDH 248 D +VL CTHYPL+ + ++ ++ +D+S + A A+ LL +NT Q D+ Sbjct: 184 VDTLVLGCTHYPLLKPLIKK-EANTLELVDSSITTAEATAQALLDAHLLNTSQQ--MPDY 240 Query: 249 ALFLSGKP 256 ++S P Sbjct: 241 RFYVSDIP 248 >gi|163840216|ref|YP_001624621.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209] gi|162953692|gb|ABY23207.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209] Length = 306 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 12/223 (5%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + Q + IFDSG+GGL V + + +P YV D PYG ++ + + + Sbjct: 8 QAQAPLGIFDSGVGGLTVARSVIDQLPNESIFYVGDTANAPYGPLPIAEVRANALGVMDE 67 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISIL 126 ++D +L VIACN+A + + R + + V PA+++A A T++G I ++ Sbjct: 68 LVDSGVKLL-VIACNSATAAVLPDARERYTLRHGIPVVEVIRPAVRRAVAATRNGRIGVI 126 Query: 127 STPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 T AT+ R Y + + Q V+S VE GI E+ E Sbjct: 127 GTEATIGSRAYEDSFAVASDLQ-----VTSAACPKFVEFVELGITAGP-ELLNTAEEYLA 180 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + D +VL CTHYPL+ V + V + +++ A+ Sbjct: 181 PLKAAGVDTLVLGCTHYPLLTGVISYVMGDGVTLVSSAEETAK 223 >gi|324991303|gb|EGC23236.1| glutamate racemase [Streptococcus sanguinis SK353] gi|325687120|gb|EGD29143.1| glutamate racemase [Streptococcus sanguinis SK72] Length = 264 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + K++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|228954765|ref|ZP_04116787.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804963|gb|EEM51560.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 269 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG + +R + ++ Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEV-RRFTWEMTE 60 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 61 HLLNLNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 174 KSTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 233 -SDHLFLTTGK 242 >gi|125718584|ref|YP_001035717.1| glutamate racemase [Streptococcus sanguinis SK36] gi|166231063|sp|A3CPR2|MURI_STRSV RecName: Full=Glutamate racemase gi|125498501|gb|ABN45167.1| Glutamate racemase, putative [Streptococcus sanguinis SK36] Length = 264 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + K++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|312898722|ref|ZP_07758111.1| glutamate racemase [Megasphaera micronuciformis F0359] gi|310620153|gb|EFQ03724.1| glutamate racemase [Megasphaera micronuciformis F0359] Length = 270 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 20/233 (8%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I +FDSG+GGL V+ K+R L+P IYV D PYG + + L F Sbjct: 6 KAEQPIGVFDSGVGGLTVVNKLRHLLPHEDIIYVGDTKRNPYGTRTQNEI---LTFTEQI 62 Query: 71 I--LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I L++ Q L V ACNTA + ++R ++ LG I+ A + I++ +T Sbjct: 63 IAFLERRQVKLIVFACNTATAVAYMKMREKTKTL-LLGMSRGIETARHISTENRIAVFAT 121 Query: 129 PATLRRTYTSNLIH-SYVSQCHIHLV----SSMILASRVEEYACGIKIKEDEIKKEIEGC 183 P T+ +N +H +Q L LA+ +E ++ +E+++ + Sbjct: 122 PLTI-----ANHVHRDEAAQLDPSLTIVEQPCASLAALIERG----QLNTEEMRQAVTAD 172 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 D + CTHYP + +F ++ + ++D + A +A +L + Sbjct: 173 TKPVLEAHVDTAIFGCTHYPFVQPLFEEICGDSIVFVDPAHETALQASAILKK 225 >gi|302872434|ref|YP_003841070.1| glutamate racemase [Caldicellulosiruptor obsidiansis OB47] gi|302575293|gb|ADL43084.1| glutamate racemase [Caldicellulosiruptor obsidiansis OB47] Length = 267 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 13/203 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +++ LMP + +Y D PYG+ + K M +L K Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNENIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ V+ACNTA + L+ +F P +A + P K A T++ + ++ T T+ Sbjct: 66 VKIV-VVACNTASAYAYETLKKSFDIPIVAVIE--PGAKAAVNATKNKRVGVVGTEGTIA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191 I S + + VEE G KE + KE F EKE Sbjct: 123 SGSFEKKILELDSSIKVFSKPCPLFVPLVEE---GWTDKEVTYLVAKEYLEEFSEKE--- 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 D +VL CTHYP + V +++ P Sbjct: 177 IDTLVLGCTHYPFLQDVIKKVLP 199 >gi|255767654|ref|NP_390717.2| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168] gi|251757300|sp|P94556|MURI1_BACSU RecName: Full=Glutamate racemase 1 gi|225185282|emb|CAB14799.2| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168] Length = 272 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 7/248 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T Sbjct: 62 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE K ++ +K + Sbjct: 121 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKT----SLYPLKDT 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH Sbjct: 177 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 236 Query: 250 LFLSGKPD 257 +G D Sbjct: 237 FLTTGARD 244 >gi|329116659|ref|ZP_08245376.1| glutamate racemase [Streptococcus parauberis NCFD 2020] gi|326907064|gb|EGE53978.1| glutamate racemase [Streptococcus parauberis NCFD 2020] Length = 264 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 34/263 (12%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++R +P + +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELRRQLPHENIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ V ACNTA + +E++ S+ LG + P A T + Sbjct: 53 FTWDLVNFLLTKDVKMI-VFACNTATAVAWEEVKEAL-SIPVLGVILPGSSAAIKSTTNR 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKE 173 + ++ TP T + S + Q I L++ M+ V AC +IK Sbjct: 111 KVGVIGTPMT---------VSSNIYQEKIQLLAPML---SVISLACPKFVPIVESNEIKS 158 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 KK + GK D +VL CTHYPL+ + + + V +D+ R L Sbjct: 159 SVAKKVVYDTLSPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPGVKLIDSGAECVRDISVL 217 Query: 234 LP--RINTHQTRVFDDHALFLSG 254 L +IN + + +H + + Sbjct: 218 LNYFQINANPKEIEKNHRFYTTA 240 >gi|325695051|gb|EGD36954.1| glutamate racemase [Streptococcus sanguinis SK150] gi|325696351|gb|EGD38242.1| glutamate racemase [Streptococcus sanguinis SK160] Length = 264 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRS 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + K++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMKVESLACPKFVPLVESNEL-----HSSLTKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|261337748|ref|ZP_05965632.1| glutamate racemase [Bifidobacterium gallicum DSM 20093] gi|270277201|gb|EFA23055.1| glutamate racemase [Bifidobacterium gallicum DSM 20093] Length = 258 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 7/221 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V++++R +P H +Y D PYG +++ L F D + Sbjct: 7 IGVFDSGLGGLSVVRQIREDLPNEHVLYFGDSAHAPYGVKTPDEVRE-LSFGIVDNFVRQ 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATLR 133 VIACNTA + +ELR T+ + +G PA+K A Q +I+ +T TLR Sbjct: 66 GAKAIVIACNTATSAAVNELRDTY-DVPIIGMEPALKVAVDRGQGQRQNIIVAATELTLR 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L+ + + IH + L VE G + + + + D Sbjct: 125 ERKFEQLMQRFEADHTIHRLPCPDLVEIVEH---GQLDDTALVDATLRRYLHDYDLDTID 181 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 IVL CTH+ F+++ P +D + A R +L Sbjct: 182 AIVLGCTHFVFYRDAFQRIVPEHTAIIDGNAGTAHHLRVVL 222 >gi|332830408|gb|EGK03036.1| glutamate racemase [Dysgonomonas gadei ATCC BAA-286] Length = 275 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 17/231 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG GGL +L +++ LMPEY + Y+ D+ PYG+ + K+ ++ LF Sbjct: 7 IGVFDSGYGGLTILSEIQSLMPEYDYCYLGDNSRAPYGSRSFDVVYEFTKQAVLSLFDMG 66 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 + L ++ACNTA T+ + +L P LG + P + TQS + I Sbjct: 67 CN-----LVILACNTASAKALRTIQQKDLPHIDPDKRVLGVIRPTAEIIGPITQSRHVGI 121 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L T T++ S I+ + + + VE + + IKK + I Sbjct: 122 LGTTGTIQSESYSIEINKLFPDIKVSGEACPMWVPLVENREYENEGADYFIKKNLSN--I 179 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + + D ++L CTHYP++++ + P V + + IAR + L R Sbjct: 180 LSKDPQIDTLILGCTHYPILLNKIKSFLPDGVTAIAQGEYIARSLQDYLHR 230 >gi|270295594|ref|ZP_06201795.1| glutamate racemase [Bacteroides sp. D20] gi|270274841|gb|EFA20702.1| glutamate racemase [Bacteroides sp. D20] Length = 279 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 9/218 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL +L K+R ++P+Y +IY+ D+ PYG + + + + + + Sbjct: 12 IGIFDSGYGGLTILSKIREVLPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA + ++L P LG + P ++ TQS + +L+T Sbjct: 71 GCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ +H + + + S VE + + I+K I G + K+ Sbjct: 131 GTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNI-GNLLAKD- 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + D ++L CTH+PL++ +Q P + + + +A Sbjct: 189 TQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVA 226 >gi|83753859|pdb|1ZUW|A Chain A, Crystal Structure Of B.Subtilis Glutamate Racemase (Race) With D-Glu gi|83753860|pdb|1ZUW|B Chain B, Crystal Structure Of B.Subtilis Glutamate Racemase (Race) With D-Glu gi|83753861|pdb|1ZUW|C Chain C, Crystal Structure Of B.Subtilis Glutamate Racemase (Race) With D-Glu gi|1770057|emb|CAA99552.1| glutamate racemase [Bacillus subtilis] Length = 272 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 7/248 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T Sbjct: 62 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE + DEI K + Sbjct: 121 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKF-LDQTADEIVKT---SLYPLKDT 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH Sbjct: 177 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 236 Query: 250 LFLSGKPD 257 +G D Sbjct: 237 FLTTGARD 244 >gi|327403118|ref|YP_004343956.1| glutamate racemase [Fluviicola taffensis DSM 16823] gi|327318626|gb|AEA43118.1| glutamate racemase [Fluviicola taffensis DSM 16823] Length = 275 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 25/235 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL+++R +PEY F+Y+ D+ PYG+ + + D+ Sbjct: 7 IGVFDSGYGGLTVLKEIREKLPEYDFLYLGDNARAPYGSRSFPVIYDYTWQAVQALFDR- 65 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA + + +L P LG + P+ ++ ++++ + +L+T Sbjct: 66 DCSLVILACNTASAKALRNIQRIKLPELHPDKRVLGVIRPSTEELDKHSKTKHVGVLATD 125 Query: 130 ATLRRT--------YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 T+R + +L+ V+Q + +I ++ + I+ED ++ Sbjct: 126 GTIRSNSYQIELAKFAPDLV---VNQHACPMWVPLIENNKFDSPGGIYFIQEDLVQ---- 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 +EK+ K D I+LACTHYP+++ + L P ++ L +A L R Sbjct: 179 --LLEKDPK-IDTILLACTHYPILLDQIKGLLPEQIEVLPQGQIVANSLADYLDR 230 >gi|158520555|ref|YP_001528425.1| glutamate racemase [Desulfococcus oleovorans Hxd3] gi|158509381|gb|ABW66348.1| glutamate racemase [Desulfococcus oleovorans Hxd3] Length = 261 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 5/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + + Y +Y D PYG + K + +++L + Sbjct: 2 IGIFDSGLGGLTVARAVMDELAGYDILYFGDTARTPYGAKSPETVIKYALE-NTELLLSH 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + ++ACNTA ++ + + + F F PA+ AA +++G I ++ T AT+ Sbjct: 61 GAKMVIMACNTASSVATEAVTARFDIPVFEVITPAVALAARLSKTGAIGVIGTRATINSG 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 I +H + +L VEE +K+ E ++ + ++ D + Sbjct: 121 IYEKKILEQRPGARVHSQACPLLVPLVEEG----WLKKPETAMIVKKYLHPLKTRQVDTL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +L CTHYP++ V +D+S ++AR + + Sbjct: 177 ILGCTHYPILKKTIGHKIGRRVAIIDSSTAVARSVKAFI 215 >gi|325663116|ref|ZP_08151566.1| glutamate racemase [Lachnospiraceae bacterium 4_1_37FAA] gi|325470570|gb|EGC73800.1| glutamate racemase [Lachnospiraceae bacterium 4_1_37FAA] Length = 286 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 7/204 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E K I +FDSG+GGL V +++ +P +Y D PYG+ + + + + Sbjct: 12 ENKKDMPIGVFDSGVGGLTVAREIMRQLPNESIVYFGDTARVPYGSKSETTIIRYSRQII 71 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 +L K + VIACNTA L D +R F + +G V P + A T + I ++ Sbjct: 72 RFLLTKEVKAI-VIACNTASALALDAVRKEF-KIPIIGVVAPGARAAREETINKKIGVIG 129 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++ LI + Q + + + VEE KI ++ I+ + Sbjct: 130 TEATVKSEIYKKLIQAEDPQISVSGRACPLFVPLVEEGFAKHKI----TREVIDIYLSDM 185 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQ 211 D ++L CTHYPL+ R+ Sbjct: 186 RESDIDTLILGCTHYPLLRSTIRE 209 >gi|41408522|ref|NP_961358.1| glutamate racemase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81571208|sp|Q73X85|MURI_MYCPA RecName: Full=Glutamate racemase gi|41396878|gb|AAS04741.1| MurI [Mycobacterium avium subsp. paratuberculosis K-10] Length = 275 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 6/188 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL V + + +P+ H IYV D PYG ++ + + D++ + Sbjct: 10 IFDSGVGGLTVARAIIDQLPDEHIIYVGDTGHGPYGPLSIPEVRAHALAIGDDLVGRGVK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACNTA + R + +PA+++A A T++G I ++ T AT+ ++ Sbjct: 70 AL-VIACNTASAACLRDARERYEVPVVEVILPAVRRAVATTRNGRIGVIGTQATI-NSHA 127 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + I V+ VE + ++ EG + + D +VL Sbjct: 128 YQDAFAAARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVDTLVL 183 Query: 198 ACTHYPLI 205 CTHYPL+ Sbjct: 184 GCTHYPLL 191 >gi|253580902|ref|ZP_04858164.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847744|gb|EES75712.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 273 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 20/216 (9%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKID + I +FDSG+GGL V +++ +P +Y D PYG+ + Sbjct: 1 MKIDR-------EAPIGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKETI 53 Query: 61 KK--RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117 + R + F L + Q V+ACNTA D +R F + +G + P K AAA Sbjct: 54 IRYSRQIIRF---LQQQQVKAIVVACNTASAFALDAVRDEF-DIPIIGVIEPGAKVAAAQ 109 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T++ + I+ T T+ + + + + + + VEE D + Sbjct: 110 TRNKRVGIIGTVGTVGSGIHAEYLKHLDPEITVFGKACPLFVPLVEEGWL-----HDPVT 164 Query: 178 KEIEGCFI-EKEGKRTDVIVLACTHYPLIVHVFRQL 212 E+ ++ E + K+ D ++L CTHYPL+ R++ Sbjct: 165 DEVAARYLKELQDKQVDTLILGCTHYPLLRSTIRKI 200 >gi|310780269|ref|YP_003968601.1| glutamate racemase [Ilyobacter polytropus DSM 2926] gi|309749592|gb|ADO84253.1| glutamate racemase [Ilyobacter polytropus DSM 2926] Length = 261 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM----FLFSDI 71 I +FDSG+GG+ V++++ ++PE IY D+ F Y N +++ M FL + Sbjct: 4 IGVFDSGVGGITVVKEINKILPEDTIIYYGDNKNFHYENLSVDQIREHCMKIVEFLVLNG 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D V+AC+ A D L+S F + +G + K T + I I +TPA Sbjct: 64 VDAV-----VVACSVATAAALDTLKSRFAHIPIVGVIDTGAKVGVEMTSNNSIGIFATPA 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + + L +E+ ++ DE+ KE ++ + Sbjct: 119 TVAMDAYPKALRNINRKISVFQKGCPKLCYMIED-GWEDTLENDEVVKE----YLSYIPE 173 Query: 191 RTDVIVLACTHYPLIVHVFRQ 211 +TD ++L CTHYPLI HV + Sbjct: 174 QTDTLLLGCTHYPLIRHVIAR 194 >gi|300780581|ref|ZP_07090436.1| glutamate racemase [Corynebacterium genitalium ATCC 33030] gi|300533567|gb|EFK54627.1| glutamate racemase [Corynebacterium genitalium ATCC 33030] Length = 284 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 22/203 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL V + + +P IY+ D PYG ++ M + D++++ Sbjct: 21 IGIFDSGFGGLTVARSVMDQLPGESVIYIGDGANGPYGPKPLAEVRGHAMAIADDLVERG 80 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ VIACNTA + R + PA+++A A T++G + ++ T AT+R Sbjct: 81 CKMI-VIACNTASAAFLHDARERYSVPVIEVIKPAVRRAVATTRNGKVGVIGTQATIRSG 139 Query: 136 YTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 +L I + + C + V + + R ++ +G Sbjct: 140 VYQDLFSLAPGIEATAAACPAFVEFVEAGVTHGR-------------QVLGVAQGYVEPL 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFR 210 + D +VL CTHYPL+ V + Sbjct: 187 QAAGVDTLVLGCTHYPLLSGVIQ 209 >gi|118465713|ref|YP_880790.1| glutamate racemase [Mycobacterium avium 104] gi|254774375|ref|ZP_05215891.1| glutamate racemase [Mycobacterium avium subsp. avium ATCC 25291] gi|166231040|sp|A0QD02|MURI_MYCA1 RecName: Full=Glutamate racemase gi|118167000|gb|ABK67897.1| glutamate racemase [Mycobacterium avium 104] Length = 275 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 6/188 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL V + + +P+ H IYV D PYG ++ + + D++ + Sbjct: 10 IFDSGVGGLTVARAIIDQLPDEHIIYVGDTGHGPYGPLSIPEVRAHALAIGDDLVGRGVK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACNTA + R + +PA+++A A T++G I ++ T AT+ ++ Sbjct: 70 AL-VIACNTASAACLRDARERYEVPVVEVILPAVRRAVATTRNGRIGVIGTQATI-NSHA 127 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + I V+ VE + ++ EG + + D +VL Sbjct: 128 YQDAFAAARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVDTLVL 183 Query: 198 ACTHYPLI 205 CTHYPL+ Sbjct: 184 GCTHYPLL 191 >gi|302562067|ref|ZP_07314409.1| glutamate racemase [Streptomyces griseoflavus Tu4000] gi|302479685|gb|EFL42778.1| glutamate racemase [Streptomyces griseoflavus Tu4000] Length = 264 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 81/196 (41%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + D G P+G L +R + + + Sbjct: 3 IALMDSGIGLLAATAAVRRLRPDADLVLSLDPDGMPWGPRTPQDLTERALAVAE-AAAAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIVGCNTATVHALTALRARLEPGLPVIGTVPAIKPAAA--GGGPLAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y +LI + + V LA VE ++ E Sbjct: 120 PYQRDLIEDFAGGVAVTQVPCWGLAEAVER-------ADETAIDAAVAAAAELTPDEVTT 172 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 173 VVLGCTHYELVGERIR 188 >gi|253581900|ref|ZP_04859124.1| glutamate racemase [Fusobacterium varium ATCC 27725] gi|251836249|gb|EES64786.1| glutamate racemase [Fusobacterium varium ATCC 27725] Length = 263 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 8/192 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GG VL+ M ++P + IY AD PYG L + L F D K Sbjct: 6 SIGVFDSGVGGTTVLKIMAEILPHENIIYYADSGNAPYGKKTVEEL-QSLCFNIMDFFLK 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + VIACNTA ++ + + +G + P K AA +++G I++L+TP T Sbjct: 65 NRCKAVVIACNTATAAALTAIKERY-DIPVIGVINPGAKAAANMSKNGHIAVLATPFTAN 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + ++ L + +EE + E + +I I + D Sbjct: 124 SNAYGEEIKKISKKVSVYQEGCSELCTMIEE-----GWENFENRGDILDGHISQFPGSAD 178 Query: 194 VIVLACTHYPLI 205 +VL CTHYP+I Sbjct: 179 TLVLGCTHYPII 190 >gi|148359847|ref|YP_001251054.1| glutamate racemase [Legionella pneumophila str. Corby] gi|296107897|ref|YP_003619598.1| glutamate racemase [Legionella pneumophila 2300/99 Alcoy] gi|148281620|gb|ABQ55708.1| glutamate racemase [Legionella pneumophila str. Corby] gi|295649799|gb|ADG25646.1| glutamate racemase [Legionella pneumophila 2300/99 Alcoy] Length = 272 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + ++++ Sbjct: 8 AIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMAKILVER 67 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA T L+S + L P A + T++ I++L+T T+ Sbjct: 68 RIKAL-VIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLATETTIA 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +LI + + + + +L + EE + + +K ++ E D Sbjct: 127 SRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE------D 180 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 ++L CTH+P+ + L P V +D++ + A Sbjct: 181 AVLLGCTHFPVFKPLLSSLLPKGVAIVDSAQATA 214 >gi|119961466|ref|YP_948293.1| glutamate racemase [Arthrobacter aurescens TC1] gi|119948325|gb|ABM07236.1| glutamate racemase [Arthrobacter aurescens TC1] Length = 373 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 14/219 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +YV D PYG ++ + + +++D Sbjct: 59 IGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDELVDSG 118 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L+ IACN+A + + R + + + + PA+++A + T+SG I ++ T AT Sbjct: 119 VKLLT-IACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVSATRSGKIGVIGTSAT 177 Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189 + R Y + ++S+ + V GI D + E ++E + Sbjct: 178 VGSRAYEDTF-----AAAPDLTITSVACPAFVNFVEAGITTGPDLLAAANE--YLEPLKS 230 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYPL+ V + V + +++ A+ Sbjct: 231 AGVDTVVLGCTHYPLLTGVISFVMGEDVTLVSSAEETAK 269 >gi|328880727|emb|CCA53966.1| Glutamate racemase [Streptomyces venezuelae ATCC 10712] Length = 264 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 81/191 (42%), Gaps = 11/191 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + D G P+G L R + + + + Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLLLSNDPDGMPWGPRTPEDLTGRALAVALAAAE-H 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA +R+ P +A +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPQALIVACNTATVHALPAIRAALEPDIAVIGTVPAIKPAAA--GGGKVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE + E + Sbjct: 120 AYQRGLIRDFADGAEVTEVPCPGLADAVEH-------ADPEAVDRAVAAAAALTPRDVRT 172 Query: 195 IVLACTHYPLI 205 +VL CTHY L+ Sbjct: 173 VVLGCTHYELV 183 >gi|328953591|ref|YP_004370925.1| Glutamate racemase [Desulfobacca acetoxidans DSM 11109] gi|328453915|gb|AEB09744.1| Glutamate racemase [Desulfobacca acetoxidans DSM 11109] Length = 267 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 30/252 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL++ +P+Y ++Y+ D+ PYG D + K D L + Sbjct: 2 IGVFDSGFGGLAVLREFLQALPDYDYLYLGDNARIPYGTRSDQVVLK-FTRQAVDYLFRQ 60 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +L ++AC+TA T+ + L +P+ LG V P +++A + T SG I I+ T Sbjct: 61 GCILIILACHTASSKALRTIQQYYLPVHYPNNRVLGVVIPTVEEALSRTVSGRIGIIGTE 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIE 186 T+ SN S+ + H + +V + AC + I+ E E+ + Sbjct: 121 GTV----ASN---SFPIELH-----KLNPGVQVFQQACPLLVPIIEAGEQDGEVADLMLN 168 Query: 187 K-----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRIN 238 K E R D ++L CTHY ++ + L + + + + A + L P IN Sbjct: 169 KYLGPFEAHRIDTLILGCTHYSILKTKIKNLLGQKIQIICSGEVTAVKLADYLRRHPEIN 228 Query: 239 THQTRVFDDHAL 250 +R H L Sbjct: 229 QRLSRTGQRHYL 240 >gi|296118692|ref|ZP_06837268.1| glutamate racemase [Corynebacterium ammoniagenes DSM 20306] gi|295968181|gb|EFG81430.1| glutamate racemase [Corynebacterium ammoniagenes DSM 20306] Length = 265 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 21/262 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ IYV D PYG E ++ + D++ + Sbjct: 7 IGIFDSGVGGLTVARTIMEQLPQESIIYVGDTAHAPYGPRELEDVQNLSRAIADDLVARG 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +L VIACNTA DE R + PA+++A A T++ + ++ T T+ Sbjct: 67 CKML-VIACNTATAAFLDEARQRYDIPVVEVIRPAVRRALATTRNHKVGVIGTEGTINSQ 125 Query: 136 YTSNLI----HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +L + H V+ VE GI +I E + Sbjct: 126 AYQHLFVQANDAETPNVEAHAVACPDFVPFVER---GITSGR-QILGVAEAYLAPLQAAG 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR-----INTHQTRVF 245 D +VL CTHYPL+ + + V + +++ A+ R L R ++ TR+F Sbjct: 182 VDTLVLGCTHYPLLTGIIQLAMGDNVTLVSSAEETAKDVLRILTERDELAPVDNEPTRLF 241 Query: 246 DDHALFLSGKPDIAMRRLMQGF 267 + +G P+ RL Q F Sbjct: 242 ES-----TGDPE-TFARLAQRF 257 >gi|326803296|ref|YP_004321114.1| glutamate racemase [Aerococcus urinae ACS-120-V-Col10a] gi|326650395|gb|AEA00578.1| glutamate racemase [Aerococcus urinae ACS-120-V-Col10a] Length = 273 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 7/202 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I DSG+GGL V+++ +P IY+ D+ PYG + + + L + Sbjct: 1 MKRPIGFLDSGVGGLTVVKEAMRQLPNESIIYIGDNARCPYGPRPEAEINEFTQELVDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L++ +L VIACNTA + + +R ++ +G + P + A Y+++G I IL+T A Sbjct: 61 LEQNIKML-VIACNTATAVSLERIRQRV-NIPVIGVIHPGARAANRYSENGHIGILATEA 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + N++ + + HL+ ++ S+ + KK + + + Sbjct: 119 TINSHFYQNVLLDH----NKHLILYPLVCSKFVPLVESGQYSSPIAKKIVAESLYDLKQT 174 Query: 191 RTDVIVLACTHYPLIVHVFRQL 212 D ++L CTHYPL+ + ++ Sbjct: 175 AIDTLILGCTHYPLLAPLIQKF 196 >gi|55981612|ref|YP_144909.1| glutamate racemase [Thermus thermophilus HB8] gi|81600355|sp|Q5SHT7|MURI_THET8 RecName: Full=Glutamate racemase gi|55773025|dbj|BAD71466.1| glutamate racemase [Thermus thermophilus HB8] Length = 257 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 17/225 (7%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I +FDSG+GGL VL+ +R L+P F+Y D PYG + A+ +R + + Sbjct: 2 KDPKAPIGVFDSGVGGLTVLKALRRLLPREEFLYFGDTARVPYGG-KPLAMVRRFAWEIA 60 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L + V+ACNTA + +L F PA + A + + GLI +T Sbjct: 61 GFLLRQGVKAIVVACNTASSAALPDLAEDLSVPVFGVVEPAARAARGFRKVGLIGTQATV 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 + Y + ++ C + + VEE + +D + + ++E Sbjct: 121 ES--GAYPRYVDLAWAKACPLFV-------PLVEE-----GLWDDPVALLVARHYLEDAP 166 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 K + ++L CTHYP + + P V LD+++ A+ AR L Sbjct: 167 KDLEALILGCTHYPFLKGAIGAVLPG-VALLDSAELTAQEVARAL 210 >gi|327490090|gb|EGF21878.1| glutamate racemase [Streptococcus sanguinis SK1058] gi|332367402|gb|EGJ45135.1| glutamate racemase [Streptococcus sanguinis SK1059] Length = 264 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTVSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + K++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|253573241|ref|ZP_04850584.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846769|gb|EES74774.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14] Length = 272 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 21/231 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-- 69 +Q +I I DSG+GGL V +++ +P IY D PYG ++ LF+ Sbjct: 3 VQQAIAILDSGVGGLTVCKEVMRQLPREKIIYFGDTARAPYGPRSPEEVR-----LFTEQ 57 Query: 70 --DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 D L ++ P + VIACNTA D +++ + +G + P + A + T++G + ++ Sbjct: 58 IVDYLIQFHPKMIVIACNTATAAALDFIKAKV-DIPVIGVIHPGARAAISETKTGKVGVI 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE---IEGC 183 T T+R + + Q + I++ E+ ++ E K+ +E Sbjct: 117 GTVGTIRSGAYTVALRELNPQ-------TEIVSEACPEFVPLVEHGLYETKEALHVVERS 169 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 E + + D ++L CTHYP + +++ V + ++D AR +L Sbjct: 170 LREMKKQPMDCLILGCTHYPFLKDPIQRVMGPNVKLISSADETAREISTIL 220 >gi|327470419|gb|EGF15875.1| glutamate racemase [Streptococcus sanguinis SK330] Length = 264 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + K++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVDSLACPKFVPLVESNEL-----HSSLTKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|312903654|ref|ZP_07762830.1| glutamate racemase [Enterococcus faecalis TX0635] gi|310633007|gb|EFQ16290.1| glutamate racemase [Enterococcus faecalis TX0635] Length = 275 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVIQFTWEMADFLL 65 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + ++ VE + + KK + Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 168 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222 >gi|42523267|ref|NP_968647.1| hypothetical protein Bd1778 [Bdellovibrio bacteriovorus HD100] gi|39575472|emb|CAE79640.1| murI [Bdellovibrio bacteriovorus HD100] Length = 268 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 9/214 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL+++ P F+YV D PYG+ ++K + L+K Sbjct: 9 IGVFDSGIGGLTVLKELALQFPHESFLYVGDTARLPYGSKSPQTIRKYSEQIIQ-FLEKQ 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA + + + P + P ++A + I +L+T AT+ Sbjct: 68 NVKAIVIACNTASSQVPEREIDGLPIYNVIE--PGSQRALELSSGKRIGVLATRATVNSQ 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDV 194 ++ IH+ Q + + + EE D + I ++ D Sbjct: 126 AYTHKIHALDPQAQVFDQACPLFVPLAEE-----GWDADPVTNLIVFRYLSPLLQNHIDT 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++L CTHYP++ + +++ ++ +D+ ++IA+ Sbjct: 181 LILGCTHYPILKNSIARVTGSSIELVDSGEAIAQ 214 >gi|192988279|pdb|2VVT|A Chain A, Glutamate Racemase (Muri) From E. Faecalis In Complex With A 9-Benzyl Purine Inhibitor gi|192988280|pdb|2VVT|B Chain B, Glutamate Racemase (Muri) From E. Faecalis In Complex With A 9-Benzyl Purine Inhibitor Length = 290 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 24 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 83 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 84 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 130 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + ++ VE + + KK + Sbjct: 131 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 186 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 187 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 240 >gi|78066994|ref|YP_369763.1| glutamate racemase [Burkholderia sp. 383] gi|77967739|gb|ABB09119.1| glutamate racemase [Burkholderia sp. 383] Length = 286 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 6/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P+ FIYVAD PYG ++ + +R + + + L + Sbjct: 17 IGIFDSGLGGLSVLRAVRAQLPDESFIYVADSHHAPYGPRDEAFITERTLAI-GEWLARE 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA R SM +G P IK AAA + SG+ +L+T +TL Sbjct: 76 GAKALVIACNTATARAIAATREHL-SMPLVGVEPGIKPAAAVSASGVAGVLATQSTLNSP 134 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ Y + L +E ++ ++ D + Sbjct: 135 RFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRALLDSYLQPMLDDGADTL 190 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VL CTHYP R L + +D SD+IAR+ Sbjct: 191 VLGCTHYPFFTETIRDLVGDRLTLVDTSDAIARQ 224 >gi|315144634|gb|EFT88650.1| glutamate racemase [Enterococcus faecalis TX2141] gi|315160935|gb|EFU04952.1| glutamate racemase [Enterococcus faecalis TX0645] Length = 275 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + ++ VE + + KK + Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 168 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222 >gi|229546200|ref|ZP_04434925.1| glutamate racemase [Enterococcus faecalis TX1322] gi|229550385|ref|ZP_04439110.1| glutamate racemase [Enterococcus faecalis ATCC 29200] gi|255973156|ref|ZP_05423742.1| glutamate racemase [Enterococcus faecalis T1] gi|255976199|ref|ZP_05426785.1| glutamate racemase [Enterococcus faecalis T2] gi|256618705|ref|ZP_05475551.1| glutamate racemase [Enterococcus faecalis ATCC 4200] gi|256762129|ref|ZP_05502709.1| glutamate racemase [Enterococcus faecalis T3] gi|256852771|ref|ZP_05558141.1| glutamate racemase [Enterococcus faecalis T8] gi|256958618|ref|ZP_05562789.1| glutamate racemase [Enterococcus faecalis DS5] gi|256965478|ref|ZP_05569649.1| glutamate racemase [Enterococcus faecalis HIP11704] gi|257078028|ref|ZP_05572389.1| glutamate racemase [Enterococcus faecalis JH1] gi|257082916|ref|ZP_05577277.1| glutamate racemase [Enterococcus faecalis E1Sol] gi|257085618|ref|ZP_05579979.1| glutamate racemase [Enterococcus faecalis Fly1] gi|257089533|ref|ZP_05583894.1| glutamate racemase [Enterococcus faecalis CH188] gi|257422962|ref|ZP_05599952.1| glutamate racemase [Enterococcus faecalis X98] gi|307268765|ref|ZP_07550133.1| glutamate racemase [Enterococcus faecalis TX4248] gi|307273812|ref|ZP_07555034.1| glutamate racemase [Enterococcus faecalis TX0855] gi|307274577|ref|ZP_07555757.1| glutamate racemase [Enterococcus faecalis TX2134] gi|307278843|ref|ZP_07559906.1| glutamate racemase [Enterococcus faecalis TX0860] gi|307288574|ref|ZP_07568558.1| glutamate racemase [Enterococcus faecalis TX0109] gi|307291104|ref|ZP_07570989.1| glutamate racemase [Enterococcus faecalis TX0411] gi|312899596|ref|ZP_07758922.1| glutamate racemase [Enterococcus faecalis TX0470] gi|312951373|ref|ZP_07770271.1| glutamate racemase [Enterococcus faecalis TX0102] gi|229304507|gb|EEN70503.1| glutamate racemase [Enterococcus faecalis ATCC 29200] gi|229308724|gb|EEN74711.1| glutamate racemase [Enterococcus faecalis TX1322] gi|255964174|gb|EET96650.1| glutamate racemase [Enterococcus faecalis T1] gi|255969071|gb|EET99693.1| glutamate racemase [Enterococcus faecalis T2] gi|256598232|gb|EEU17408.1| glutamate racemase [Enterococcus faecalis ATCC 4200] gi|256683380|gb|EEU23075.1| glutamate racemase [Enterococcus faecalis T3] gi|256711230|gb|EEU26268.1| glutamate racemase [Enterococcus faecalis T8] gi|256949114|gb|EEU65746.1| glutamate racemase [Enterococcus faecalis DS5] gi|256955974|gb|EEU72606.1| glutamate racemase [Enterococcus faecalis HIP11704] gi|256986058|gb|EEU73360.1| glutamate racemase [Enterococcus faecalis JH1] gi|256990946|gb|EEU78248.1| glutamate racemase [Enterococcus faecalis E1Sol] gi|256993648|gb|EEU80950.1| glutamate racemase [Enterococcus faecalis Fly1] gi|256998345|gb|EEU84865.1| glutamate racemase [Enterococcus faecalis CH188] gi|257164786|gb|EEU94746.1| glutamate racemase [Enterococcus faecalis X98] gi|306497758|gb|EFM67290.1| glutamate racemase [Enterococcus faecalis TX0411] gi|306500481|gb|EFM69814.1| glutamate racemase [Enterococcus faecalis TX0109] gi|306504514|gb|EFM73721.1| glutamate racemase [Enterococcus faecalis TX0860] gi|306508729|gb|EFM77819.1| glutamate racemase [Enterococcus faecalis TX2134] gi|306509497|gb|EFM78545.1| glutamate racemase [Enterococcus faecalis TX0855] gi|306514893|gb|EFM83440.1| glutamate racemase [Enterococcus faecalis TX4248] gi|310630633|gb|EFQ13916.1| glutamate racemase [Enterococcus faecalis TX0102] gi|311293275|gb|EFQ71831.1| glutamate racemase [Enterococcus faecalis TX0470] gi|315030713|gb|EFT42645.1| glutamate racemase [Enterococcus faecalis TX4000] gi|315031599|gb|EFT43531.1| glutamate racemase [Enterococcus faecalis TX0017] gi|315034959|gb|EFT46891.1| glutamate racemase [Enterococcus faecalis TX0027] gi|315148458|gb|EFT92474.1| glutamate racemase [Enterococcus faecalis TX4244] gi|315153644|gb|EFT97660.1| glutamate racemase [Enterococcus faecalis TX0031] gi|315156538|gb|EFU00555.1| glutamate racemase [Enterococcus faecalis TX0043] gi|315158364|gb|EFU02381.1| glutamate racemase [Enterococcus faecalis TX0312] gi|315165532|gb|EFU09549.1| glutamate racemase [Enterococcus faecalis TX1302] gi|315168389|gb|EFU12406.1| glutamate racemase [Enterococcus faecalis TX1341] gi|315170972|gb|EFU14989.1| glutamate racemase [Enterococcus faecalis TX1342] gi|315174640|gb|EFU18657.1| glutamate racemase [Enterococcus faecalis TX1346] gi|315577482|gb|EFU89673.1| glutamate racemase [Enterococcus faecalis TX0630] gi|329576388|gb|EGG57901.1| glutamate racemase [Enterococcus faecalis TX1467] Length = 275 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + ++ VE + + KK + Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 168 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222 >gi|327462020|gb|EGF08349.1| glutamate racemase [Streptococcus sanguinis SK1057] Length = 264 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + K++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVDSLACPKFVPLVESNEL-----HSSLTKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|151567719|pdb|2JFO|A Chain A, Crystal Structure Of Enterococcus Faecalis Glutamate Racemase In Complex With D- And L-Glutamate gi|151567720|pdb|2JFO|B Chain B, Crystal Structure Of Enterococcus Faecalis Glutamate Racemase In Complex With D- And L-Glutamate gi|151567721|pdb|2JFP|A Chain A, Crystal Structure Of Enterococcus Faecalis Glutamate Racemase In Complex With D-Glutamate gi|151567722|pdb|2JFP|B Chain B, Crystal Structure Of Enterococcus Faecalis Glutamate Racemase In Complex With D-Glutamate Length = 293 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 24 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 83 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 84 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 130 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + ++ VE + + KK + Sbjct: 131 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 186 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 187 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 240 >gi|253583512|ref|ZP_04860710.1| glutamate racemase [Fusobacterium varium ATCC 27725] gi|251834084|gb|EES62647.1| glutamate racemase [Fusobacterium varium ATCC 27725] Length = 263 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 14/198 (7%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K +I +FDSG+GG VL+++ L+P + IY D+ PYG K + D Sbjct: 2 KKNYNIGVFDSGVGGTTVLKRIIELLPNENIIYYGDNGNAPYG----EKTTKEIQGFCLD 57 Query: 71 ILDKY---QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 I+D + VIACNTA D ++ + ++ +G + P K A + + I +L Sbjct: 58 IMDFFMMNNCKAVVIACNTATAASLDLIKGRY-TVPVIGVISPGAKSAVETSTNKCIGVL 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 STP T ++ I Y ++ L +E G + ED ++ I I Sbjct: 117 STPFTAASNAYADEIAKYSKTAKVYQEGCPELCPMIE---AGWETFED--RETIIKNHIS 171 Query: 187 KEGKRTDVIVLACTHYPL 204 K + D +VL CTHYP+ Sbjct: 172 KFPRNVDTVVLGCTHYPI 189 >gi|310826435|ref|YP_003958792.1| hypothetical protein ELI_0815 [Eubacterium limosum KIST612] gi|308738169|gb|ADO35829.1| hypothetical protein ELI_0815 [Eubacterium limosum KIST612] Length = 269 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 15/203 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI--LD 73 I + DSGIGG VL++++ +P + +Y+ D PYG E+ + + F SDI L+ Sbjct: 7 IGLIDSGIGGFTVLRELQRQLPRENIVYLGDAKRMPYGERENEEI---IAFGNSDIRFLE 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ACNT +LI + L + P S+ G + I++ + G + +++T AT Sbjct: 64 NMGVKAILLACNTISSLI-ESLNANVPLFSIVEAGCLATIERQ----KEGAVGLIATTAT 118 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +++ S+ + LA+ + + + + IK+ I+ F E +R Sbjct: 119 VKNGTYEHILSSHTQALRYITQGTRTLANVINNHPGELALLRQNIKEAIDPIF---ERER 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 ++L CTH+P++ ++ P Sbjct: 176 VSALLLGCTHFPIVRKTIEEMYP 198 >gi|296454516|ref|YP_003661659.1| glutamate racemase [Bifidobacterium longum subsp. longum JDM301] gi|296183947|gb|ADH00829.1| glutamate racemase [Bifidobacterium longum subsp. longum JDM301] Length = 264 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 19/230 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++ MP H +Y D PYG ++ L DI++++ Sbjct: 7 IGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGVKTPEQVRA----LSFDIVERF 62 Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--------AYTQSGLIS 124 Q V + VIACNTA + ++LR + + +G PA+K A + + Sbjct: 63 VRQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TP TLR + L+ + S I L VE G D + + + G F Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + + D +VL CTH+ FR+L P +D ++ R +L Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVL 228 >gi|154686974|ref|YP_001422135.1| glutamate racemase [Bacillus amyloliquefaciens FZB42] gi|166231025|sp|A7Z7C8|MURI_BACA2 RecName: Full=Glutamate racemase gi|154352825|gb|ABS74904.1| RacE [Bacillus amyloliquefaciens FZB42] Length = 272 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 115/248 (46%), Gaps = 11/248 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + + Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 61 Query: 72 LDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L+ + + VIACNTA + ++D R T + +G + P + A T++ I ++ T Sbjct: 62 LENHHIKMLVIACNTATAIALEDIQRKT--DIPVVGVIQPGARTAIKVTKNQHIGVIGTV 119 Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ R Y L+ ++ + + +L VE + ++ ++ +E + Sbjct: 120 NTIKSRAYEQALL-GLNAELQVENTACPLLVPFVESG----RFLQESAEEAVEASLEPLK 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDD 247 G D ++L CTHYP++ + V + + D AR +L +Q++ + Sbjct: 175 GTSIDTLILGCTHYPILKDPIQNYMGEHVKIISSGDETAREVSTILSYKGLLNQSKHAPE 234 Query: 248 HALFLSGK 255 H +G+ Sbjct: 235 HQFLTTGE 242 >gi|298253437|ref|ZP_06977229.1| glutamate racemase [Gardnerella vaginalis 5-1] gi|297532832|gb|EFH71718.1| glutamate racemase [Gardnerella vaginalis 5-1] Length = 256 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 7/222 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GG+ V +++ +P IY D PYG +KK L F + + Sbjct: 6 AIGVFDSGLGGISVARQLHAALPHERIIYFGDSANAPYGIKTPEEVKK-LSFAIVEHFVR 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATL 132 VIACNTA + ++LR+ + ++ +G PA+K A + + + +TP TL Sbjct: 65 LNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGEPQRVIVAATPLTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R ++L+ + I L VE G D + + F E + Sbjct: 124 RERKFADLLQRFSQNNTIFSQPCPDLVRIVER---GELSNRDVVFAALHKYFDEYDLDSI 180 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+ FR+ P + +D ++ R +L Sbjct: 181 DSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKIL 222 >gi|256962283|ref|ZP_05566454.1| glutamate racemase [Enterococcus faecalis Merz96] gi|257086476|ref|ZP_05580837.1| glutamate racemase [Enterococcus faecalis D6] gi|257418950|ref|ZP_05595944.1| glutamate racemase [Enterococcus faecalis T11] gi|293383312|ref|ZP_06629227.1| glutamate racemase [Enterococcus faecalis R712] gi|293387531|ref|ZP_06632080.1| glutamate racemase [Enterococcus faecalis S613] gi|312905819|ref|ZP_07764839.1| glutamate racemase [Enterococcus faecalis DAPTO 512] gi|312909126|ref|ZP_07767985.1| glutamate racemase [Enterococcus faecalis DAPTO 516] gi|256952779|gb|EEU69411.1| glutamate racemase [Enterococcus faecalis Merz96] gi|256994506|gb|EEU81808.1| glutamate racemase [Enterococcus faecalis D6] gi|257160778|gb|EEU90738.1| glutamate racemase [Enterococcus faecalis T11] gi|291079335|gb|EFE16699.1| glutamate racemase [Enterococcus faecalis R712] gi|291083041|gb|EFE20004.1| glutamate racemase [Enterococcus faecalis S613] gi|310628158|gb|EFQ11441.1| glutamate racemase [Enterococcus faecalis DAPTO 512] gi|311290550|gb|EFQ69106.1| glutamate racemase [Enterococcus faecalis DAPTO 516] gi|315028078|gb|EFT40010.1| glutamate racemase [Enterococcus faecalis TX2137] gi|315150399|gb|EFT94415.1| glutamate racemase [Enterococcus faecalis TX0012] gi|327534752|gb|AEA93586.1| glutamate racemase [Enterococcus faecalis OG1RF] Length = 275 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + ++ VE + + KK + Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLACPKFVPIVESN----QYRSSVAKKIV 168 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222 >gi|294780992|ref|ZP_06746344.1| glutamate racemase [Enterococcus faecalis PC1.1] gi|300859676|ref|ZP_07105764.1| glutamate racemase [Enterococcus faecalis TUSoD Ef11] gi|294451938|gb|EFG20388.1| glutamate racemase [Enterococcus faecalis PC1.1] gi|300850494|gb|EFK78243.1| glutamate racemase [Enterococcus faecalis TUSoD Ef11] gi|323480360|gb|ADX79799.1| glutamate racemase [Enterococcus faecalis 62] Length = 273 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 64 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 110 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + ++ VE + + KK + Sbjct: 111 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 166 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 167 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 220 >gi|312132407|ref|YP_003999746.1| muri [Bifidobacterium longum subsp. longum BBMN68] gi|311772761|gb|ADQ02249.1| MurI [Bifidobacterium longum subsp. longum BBMN68] Length = 264 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 19/230 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++ MP H +Y D PYG ++ L DI++++ Sbjct: 7 IGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRA----LSFDIVERF 62 Query: 76 --QPVLSV-IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--------AYTQSGLIS 124 Q V +V IACNTA + ++LR + + +G PA+K A + + Sbjct: 63 VRQGVKAVAIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TP TLR + L+ + S I L VE G D + + + G F Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + + D +VL CTH+ FR+L P +D ++ R +L Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVL 228 >gi|295112705|emb|CBL31342.1| glutamate racemase [Enterococcus sp. 7L76] Length = 273 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 64 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 110 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + ++ VE + + KK + Sbjct: 111 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 166 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 167 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 220 >gi|257415735|ref|ZP_05592729.1| glutamate racemase [Enterococcus faecalis AR01/DG] gi|257157563|gb|EEU87523.1| glutamate racemase [Enterococcus faecalis ARO1/DG] Length = 275 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + ++ VE + + KK + Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 168 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222 >gi|283782931|ref|YP_003373685.1| glutamate racemase [Gardnerella vaginalis 409-05] gi|283441996|gb|ADB14462.1| glutamate racemase [Gardnerella vaginalis 409-05] Length = 256 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 7/222 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GG+ V +++ +P IY D PYG +KK L F + + Sbjct: 6 AIGVFDSGLGGISVARQLHAALPHERIIYFGDSANAPYGIKTPEEVKK-LSFAIVEHFVR 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATL 132 VIACNTA + ++LR+ + ++ +G PA+K A + + + +TP TL Sbjct: 65 LNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGEPQRVIVAATPLTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R ++L+ + I L VE G D + + F E + Sbjct: 124 RERKFADLLQRFSQNNTIFSQPCPDLVRIVER---GELNNRDVVFAALHKYFDEYDLDSI 180 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+ FR+ P + +D ++ R +L Sbjct: 181 DSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKIL 222 >gi|300869685|ref|YP_003784556.1| glutamate racemase [Brachyspira pilosicoli 95/1000] gi|300687384|gb|ADK30055.1| glutamate racemase [Brachyspira pilosicoli 95/1000] Length = 267 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 14/195 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GG+ VL+K+ ++P ++IY+ D+ PYG+ + +L D L K Sbjct: 8 IAVFDSGFGGISVLKKLLNILPNENYIYLGDNHNIPYGDKSKEEI-TQLSIKILDFLIKQ 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++VIACNT D L+ + ++ T++ ISI++T T+ Sbjct: 67 NCKMAVIACNTITASSYDVLKEKYNIPIIEIISNGVEDIIDNTKNNNISIMATEFTVHSN 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEE----YACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I Y + + V+ L +E Y I + E+ +++K Sbjct: 127 MYHDKILDYNDKIKVTQVACQKLCPMIENNWYSYDDRILVLEE---------YVKKIDDN 177 Query: 192 TDVIVLACTHYPLIV 206 +D ++LACTHYP I+ Sbjct: 178 SDTLLLACTHYPFII 192 >gi|291456377|ref|ZP_06595767.1| glutamate racemase [Bifidobacterium breve DSM 20213] gi|291381654|gb|EFE89172.1| glutamate racemase [Bifidobacterium breve DSM 20213] Length = 264 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 13/227 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++ MP H +Y D PYG +K L F + ++ Sbjct: 7 IGVFDSGLGGISVAREIAKDMPAEHVLYFGDSANAPYGVKTPEQVKA-LSFDIVERFVEH 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL--------ISILS 127 VIACNTA + ++LR + + +G PA+K A + L + + + Sbjct: 66 GVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDAPLGQQHIPQRVIVAA 124 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP TLR + L+ + S I L VE G D + + + F Sbjct: 125 TPLTLRERKFAELMKRFDSDNTIFKEPCPDLVEIVESGQLG---NHDLVMRTLHHYFDRY 181 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + R D +VL CTH+ FR+L P +D ++ R +L Sbjct: 182 DLDRIDSVVLGCTHFVFYRDYFRELLPKHAAIIDGNEGTVRHLGVVL 228 >gi|56751751|ref|YP_172452.1| glutamate racemase [Synechococcus elongatus PCC 6301] gi|81301170|ref|YP_401378.1| glutamate racemase [Synechococcus elongatus PCC 7942] gi|56686710|dbj|BAD79932.1| glutamate racemase [Synechococcus elongatus PCC 6301] gi|81170051|gb|ABB58391.1| glutamate racemase [Synechococcus elongatus PCC 7942] Length = 289 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 21/220 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL++++ +P F+Y D PYG +++ +ILD Sbjct: 16 IGVFDSGVGGLTVLRELQRQLPHESFLYFGDTARLPYGTRSPAEIRQ----FVREILDWM 71 Query: 76 QPV---LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 Q L V+ACNT+ L + LR + +M +G + PA + A Q I +++T AT Sbjct: 72 QAEGCKLVVMACNTSSALALEALRGDY-TMPLIGLIQPAARVAVQRGQR--IGVIATAAT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE---IKKEIEGCFIEKE 188 + + + + VE+ +I + + + + IE + Sbjct: 129 AQSRAYRQALREANPNVQVWEIGCPEFVPLVEQQ----RIHDPQTLQVAAQYLAPLIEAQ 184 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++ CTHYP + V +QL P LD ++++ R Sbjct: 185 ---VDTLIYGCTHYPHLAPVIQQLLPSSTHLLDPAEAVTR 221 >gi|23336033|ref|ZP_00121262.1| COG0796: Glutamate racemase [Bifidobacterium longum DJO10A] gi|23464712|ref|NP_695315.1| glutamate racemase [Bifidobacterium longum NCC2705] gi|189438967|ref|YP_001954048.1| glutamate racemase [Bifidobacterium longum DJO10A] gi|227546821|ref|ZP_03976870.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239620799|ref|ZP_04663830.1| glutamate racemase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|317481620|ref|ZP_07940656.1| Asp/Glu/Hydantoin racemase [Bifidobacterium sp. 12_1_47BFAA] gi|322689588|ref|YP_004209322.1| glutamate racemase [Bifidobacterium longum subsp. infantis 157F] gi|322691549|ref|YP_004221119.1| glutamate racemase [Bifidobacterium longum subsp. longum JCM 1217] gi|29839545|sp|Q8G7Z8|MURI_BIFLO RecName: Full=Glutamate racemase gi|229486231|sp|B3DQ51|MURI_BIFLD RecName: Full=Glutamate racemase gi|23325278|gb|AAN23951.1| glutamate racemase [Bifidobacterium longum NCC2705] gi|189427402|gb|ACD97550.1| Glutamate racemase [Bifidobacterium longum DJO10A] gi|227212783|gb|EEI80664.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239516375|gb|EEQ56242.1| glutamate racemase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|316916980|gb|EFV38366.1| Asp/Glu/Hydantoin racemase [Bifidobacterium sp. 12_1_47BFAA] gi|320456405|dbj|BAJ67027.1| glutamate racemase [Bifidobacterium longum subsp. longum JCM 1217] gi|320460924|dbj|BAJ71544.1| glutamate racemase [Bifidobacterium longum subsp. infantis 157F] Length = 264 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 19/230 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++ MP H +Y D PYG ++ L DI++++ Sbjct: 7 IGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRA----LSFDIVERF 62 Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--------AYTQSGLIS 124 Q V + VIACNTA + ++LR + + +G PA+K A + + Sbjct: 63 VRQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TP TLR + L+ + S I L VE G D + + + G F Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + + D +VL CTH+ FR+L P +D ++ R +L Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVL 228 >gi|301055994|ref|YP_003794205.1| glutamate racemase [Bacillus anthracis CI] gi|300378163|gb|ADK07067.1| glutamate racemase [Bacillus cereus biovar anthracis str. CI] Length = 267 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 16/250 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + + Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 61 LDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S ++ + + VE ++ + +++ ++ K Sbjct: 119 TVKSGAYEEALKSINNRVMVESFACPPFVELVESGNFESEMAYEVVRETLQPL------K 172 Query: 191 RTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245 TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + + Sbjct: 173 NTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 230 Query: 246 DDHALFLSGK 255 DH +GK Sbjct: 231 SDHLFLTTGK 240 >gi|255534473|ref|YP_003094844.1| Glutamate racemase [Flavobacteriaceae bacterium 3519-10] gi|255340669|gb|ACU06782.1| Glutamate racemase [Flavobacteriaceae bacterium 3519-10] Length = 282 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 8/223 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V ++++ L+P + IY D PYG A+ + +L+K Sbjct: 23 IGIFDSGVGGLTVAKEIKRLLPNENLIYFGDTKHLPYGEKSRDAIVGYSTKITRFLLEKN 82 Query: 76 QPVLSVIACNTAF-TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + VIACN+A +K+ L + + + + + AY + +++T AT+ Sbjct: 83 CKAI-VIACNSATANALKEVLDEVADRVPVIDVINPVAEKVAYEIHNNVGVIATKATVNS 141 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRTD 193 I + + +++ +L +EE K I I ++ K + Sbjct: 142 GLYRKSIRKHNKFIKVDELATPLLVPAIEE-----GFKNHPITHSIVYNYLSNNKLKNIE 196 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++L CTHYPL++ RQ V +D+ +A + R +L + Sbjct: 197 TLILGCTHYPLLIDEIRQYYGNRVRVIDSPGIVANQLRIILDK 239 >gi|21219535|ref|NP_625314.1| glutamate racemase [Streptomyces coelicolor A3(2)] gi|11071227|emb|CAC14386.1| putative glutamate racemase [Streptomyces coelicolor A3(2)] Length = 280 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 79/196 (40%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ I D G P+G L R + + + Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPKDLTGRALGVAE-AAAAH 80 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT Sbjct: 81 RPDALIVGCNTATVHALPALRARLEPDVPVIGTVPAIKPAAA--GGGPVAIWATPATTGS 138 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE ++ E Sbjct: 139 PYQRGLIEDFAGDTEVTEVPCPGLADAVEH-------ADETAITEAVAAAAALTPDDVTT 191 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 192 VVLGCTHYELVAERIR 207 >gi|221310780|ref|ZP_03592627.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168] gi|221315105|ref|ZP_03596910.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320023|ref|ZP_03601317.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324306|ref|ZP_03605600.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. SMY] gi|3241851|dbj|BAA28871.1| glutamate racemase [Bacillus subtilis] gi|291485269|dbj|BAI86344.1| glutamate racemase [Bacillus subtilis subsp. natto BEST195] Length = 271 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 7/248 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE K ++ +K + + Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKTSL----YPLKDT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 235 Query: 250 LFLSGKPD 257 +G D Sbjct: 236 FLTTGARD 243 >gi|332358334|gb|EGJ36160.1| glutamate racemase [Streptococcus sanguinis SK355] Length = 264 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 171 PLV-----GRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|224532254|ref|ZP_03672886.1| glutamate racemase [Borrelia valaisiana VS116] gi|224511719|gb|EEF82125.1| glutamate racemase [Borrelia valaisiana VS116] Length = 260 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 21/198 (10%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++FL Sbjct: 2 KNFKEVIIVFDSGIGGLSYFKYIKSKIEGYQYVYVADNKNFPYGEKSSDYLLQSVLFLIE 61 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + Y + V+ACNT + ++L FP + L V ++ + A + +++T Sbjct: 62 KLKKIYNIIALVLACNTISVSVYNKLNFVFPVIYTLPEVSSVSELALKK----VLLIATN 117 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184 TL + + Q +IH +I+ + E EY G K ++D ++ +E Sbjct: 118 TTLESKFVKD-------QVNIH--DDLIVKAAGELVNFVEY--GEKFRKDALRC-LEALK 165 Query: 185 IEKEGKRTDVIVLACTHY 202 E +++ L CTHY Sbjct: 166 FEVVHTGREIVFLGCTHY 183 >gi|317478578|ref|ZP_07937735.1| Asp/Glu/Hydantoin racemase [Bacteroides sp. 4_1_36] gi|316905219|gb|EFV27016.1| Asp/Glu/Hydantoin racemase [Bacteroides sp. 4_1_36] Length = 279 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 9/218 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + + Sbjct: 12 IGIFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA + ++L P LG + P ++ TQS + +L+T Sbjct: 71 GCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ +H + + + S VE + + I+K I G + K+ Sbjct: 131 GTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNI-GNLLAKD- 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + D ++L CTH+PL++ +Q P + + + +A Sbjct: 189 TQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVA 226 >gi|320451387|ref|YP_004203483.1| glutamate racemase [Thermus scotoductus SA-01] gi|320151556|gb|ADW22934.1| glutamate racemase [Thermus scotoductus SA-01] Length = 257 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 16/218 (7%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I +FDSG+GGL VL +R +P+ F+Y D PYG+ + ++ +R + + Sbjct: 2 KDPRRPIGVFDSGVGGLTVLSALRRALPQEDFLYFGDTARVPYGS-KPLSMVRRFAWEIA 60 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L + V+ACNTA + +L F P K A Y + GLI +T Sbjct: 61 GFLLRQGVKAIVVACNTASSAALPDLAEDLSVPVFGVLEPVAKAARGYGKVGLIGTQATV 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 + R Y + S+ C + + VEE + +D + + ++E Sbjct: 121 ES--RAYERYVGVSWARACPLFV-------PLVEE-----GLWDDPVALLVARHYLEDAP 166 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + + ++L CTHYP + ++ P V +D++++ A Sbjct: 167 QDLEALILGCTHYPFLKGTLAKVLPG-VRLIDSAEATA 203 >gi|328949910|ref|YP_004367245.1| Glutamate racemase [Marinithermus hydrothermalis DSM 14884] gi|328450234|gb|AEB11135.1| Glutamate racemase [Marinithermus hydrothermalis DSM 14884] Length = 264 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 21/218 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P F+Y D PYG+ + AL ++ + S L + Sbjct: 10 IGVFDSGVGGLTVLRALRAALPGEDFLYFGDTARVPYGS-KPPALVRQFAWEISGFLLRK 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR- 134 V+ACNTA ++ +L ++ + PA+ AAA G + ++ T T++ Sbjct: 69 GVKAIVVACNTASSVALPDLAASLSVPVYGVLEPAV--AAALRVEGRVGLIGTETTVQSG 126 Query: 135 TYTSNLIHS----YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 Y + L + + C + + VEE + ED + + + +++ K Sbjct: 127 AYQARLARAGRAVWARPCPLFV-------PLVEE-----GLWEDGVARLVVAHYLKDAPK 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++L CTHYP + V ++ P V +D+++ AR Sbjct: 175 DLSALILGCTHYPYLKPVIAEVLPG-VQLIDSAEVTAR 211 >gi|167741431|ref|ZP_02414205.1| glutamate racemase [Burkholderia pseudomallei 14] Length = 171 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ + Sbjct: 18 IGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLVAQG 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRSA 135 Query: 136 YTSNLIHSYVSQCH 149 L+ + + C Sbjct: 136 RFEALLARHAADCR 149 >gi|25028959|ref|NP_739013.1| glutamate racemase [Corynebacterium efficiens YS-314] gi|23494246|dbj|BAC19213.1| glutamate racemase [Corynebacterium efficiens YS-314] Length = 316 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 6/195 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++ Sbjct: 56 IGIFDSGVGGLTVARTIIDQLPHESIIYIGDTANGPYGPLPIARVREHALRIADELVERG 115 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ VIACNTA + R + +PA+++A A T++G + ++ T T+ Sbjct: 116 CKMI-VIACNTASAAFLRDARERYDVPVVEVILPAVRRAVAATRNGKVGVIGTVGTINSG 174 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L + S +H + VE GI +I EG + + D + Sbjct: 175 AYQDLFAASPS-IEVHAAACPRFVDFVER---GIT-SGRQILNIAEGYLEPLQAQGVDTL 229 Query: 196 VLACTHYPLIVHVFR 210 VL CTHYPL+ V + Sbjct: 230 VLGCTHYPLLSGVIQ 244 >gi|308235626|ref|ZP_07666363.1| glutamate racemase [Gardnerella vaginalis ATCC 14018] gi|311114374|ref|YP_003985595.1| glutamate racemase [Gardnerella vaginalis ATCC 14019] gi|310945868|gb|ADP38572.1| glutamate racemase [Gardnerella vaginalis ATCC 14019] Length = 260 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 7/225 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V++++R MP IY D PYG +++ L F + Sbjct: 7 IGVFDSGLGGISVVRELREAMPNERIIYFGDSANAPYGIKTPQEVRE-LSFKIVEHFASL 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133 VIACNTA + +LR + SM +G PA+K A + + + +TP TL+ Sbjct: 66 NVKAIVIACNTATSAAVKDLREHY-SMPIIGMEPALKLACDLGGGKPQRVIVAATPLTLK 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L++ + H + S VE G ++ + + F + D Sbjct: 125 ERKFAELMNRFTQD---HQIFSRPCPDLVEIVENGDLGNKNIVMSALHKYFDSYDLNNID 181 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +VL CTH+ FR+ P V +D + + +L +N Sbjct: 182 SVVLGCTHFVFYKSYFREFLPDCVKIVDGNAGTIHHLKSVLDSMN 226 >gi|291516158|emb|CBK69774.1| glutamate racemase [Bifidobacterium longum subsp. longum F8] Length = 264 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 19/230 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++ MP H +Y D PYG ++ L DI++++ Sbjct: 7 IGVFDSGLGGISVARQIAKDMPAEHVLYFGDSASAPYGIKTPEQVRA----LSFDIVERF 62 Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--------AYTQSGLIS 124 Q V + VIACNTA + ++LR + + +G PA+K A + + Sbjct: 63 VRQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TP TLR + L+ + S I L VE G D + + + G F Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + + D +VL CTH+ FR+L P +D ++ R +L Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVL 228 >gi|288819213|ref|YP_003433561.1| glutamate racemase [Hydrogenobacter thermophilus TK-6] gi|288788613|dbj|BAI70360.1| glutamate racemase [Hydrogenobacter thermophilus TK-6] gi|308752795|gb|ADO46278.1| glutamate racemase [Hydrogenobacter thermophilus TK-6] Length = 255 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 19/238 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL++++ P +Y+ D PYG + R ++ L ++ Sbjct: 5 VFDSGVGGLTVLKEIKKAFPSLDLVYLGDTARVPYGGKSKDTI-IRYSLECAEFLIRFDI 63 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR-TY 136 L V+ACNTA + D L+ F P +++A +++ +I ++ T +T++ Y Sbjct: 64 DLLVVACNTASSYALDILKKELGIPVFGVIKPGVRKALEVSKNKVIGVIGTKSTIKSGVY 123 Query: 137 TSNLIHS----YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +L+ + Y C + + VEE G+ D + K ++ + + + Sbjct: 124 QRSLMEAGSVVYAKACPLFV-------PLVEE---GLT-HGDIVDKVVDFYLRDFKNTQM 172 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D ++L CTHYPL+ + V +D++ ++ + T R+ F DH+ Sbjct: 173 DTLILGCTHYPLLAEAIKNYM-GDVQIVDSASALVEDISSFVKNEGTSSLRLFFTDHS 229 >gi|319946457|ref|ZP_08020694.1| glutamate racemase [Streptococcus australis ATCC 700641] gi|319747425|gb|EFV99681.1| glutamate racemase [Streptococcus australis ATCC 700641] Length = 264 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 16/246 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVVYIGDSARAPYGPRPADQIRD 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + +L K ++ V+ACNTA ++ +E++ + LG + P A T+S Sbjct: 53 YTWEMVRFLLTKNVKMI-VLACNTATAVVWEEVKEAL-DIPVLGVILPGASAAIKATKSK 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I S + + ++ VE + + K++ Sbjct: 111 RIGVIGTPMTVASDIYRKKIQSLSPEMAVESLACPKFVPLVESNEL-----QSSVTKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ + D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 166 YETLKPLAGKVDTLVLGCTHYPLLRPIIQNVMGPEVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD 247 +R +D Sbjct: 226 SRQLED 231 >gi|313884172|ref|ZP_07817938.1| glutamate racemase [Eremococcus coleocola ACS-139-V-Col8] gi|312620619|gb|EFR32042.1| glutamate racemase [Eremococcus coleocola ACS-139-V-Col8] Length = 280 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 7/224 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I DSG GGL VL++ +P IY+ D PYG + +R ++ ++ L + Sbjct: 6 IGFIDSGFGGLTVLKQSLKQLPNESSIYLGDSARAPYGVRSVDEI-RRFIWQMTNFLREK 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATLRR 134 + VIACNT DE+R++ ++ +G + A +AA T++ + I+ TPAT+ Sbjct: 65 GIKMLVIACNTGAAAALDEIRASL-AIPVVGVIHAGSRAAILTTENNKVGIIGTPATINS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + +IH +Q + + VEE ++ + E + + D Sbjct: 124 DSYARIIHEKNAQLQVFSKACPDFVPIVEEN----QMVQPETMNTVANYLAPLKNAGVDT 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +VL CTHYP + ++ V+ +D+ LL N Sbjct: 180 LVLGCTHYPHLRPQIQEFMGPEVELIDSGVETINEVSALLDYFN 223 >gi|212715492|ref|ZP_03323620.1| hypothetical protein BIFCAT_00389 [Bifidobacterium catenulatum DSM 16992] gi|212661574|gb|EEB22149.1| hypothetical protein BIFCAT_00389 [Bifidobacterium catenulatum DSM 16992] Length = 271 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 13/218 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++R MP +Y D PYG ++K L I+ ++ Sbjct: 20 IGVFDSGLGGISVAREIRRDMPNERVLYFGDSANAPYGTKSPEQVRK----LSDAIVKRF 75 Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPA 130 Q V + VIACNTA + +ELR + + +G PA+K A + + + +TP Sbjct: 76 VEQGVKAVVIACNTATSAAANELRDKY-DIPIIGMEPALKVACDRGHGNRQRVIVAATPL 134 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+ + + H + VE G D + + F + + Sbjct: 135 TLRERKFAVLMDRFKTD---HTIFPEPCPGLVEIVEHGQLDDHDVVMHTLHQYFDQYDLS 191 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTH+ FR+L P +D ++ R Sbjct: 192 TIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVR 229 >gi|47776277|dbj|BAD20742.1| glutamate racemase [Bacillus subtilis] Length = 271 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/248 (22%), Positives = 111/248 (44%), Gaps = 7/248 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE + DEI K + Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKF-LDQTADEIVKT---SLYPLKDT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 235 Query: 250 LFLSGKPD 257 +G D Sbjct: 236 FLTTGARD 243 >gi|296125119|ref|YP_003632371.1| glutamate racemase [Brachyspira murdochii DSM 12563] gi|296016935|gb|ADG70172.1| glutamate racemase [Brachyspira murdochii DSM 12563] Length = 275 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 14/206 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL+++ L+P ++IY+ D++ PYG+ + + L + L Sbjct: 12 IAVFDSGFGGLTVLKQLLQLLPNENYIYLGDNINIPYGDKSEEEI-INLTSKMVEFLISK 70 Query: 76 QPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + +IACNT A+ ++K + + G A+ + T++ IS+++T T Sbjct: 71 KCKIIIIACNTISACAYNILKQKYDIPIIEVISNGVADALNK----TKNNNISVMATEFT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + N I+ + + I +S L +E + D +K +++ + Sbjct: 127 VHSNVYKNKINKHNKESKITQISCKELCPMIENDWYSYDNRLDVLKN-----YLKNIDDK 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPV 217 +D ++LACTHYP I+ ++ + V Sbjct: 182 SDTLILACTHYPHIIDDIKKTLEYNV 207 >gi|227552906|ref|ZP_03982955.1| glutamate racemase [Enterococcus faecalis HH22] gi|227177960|gb|EEI58932.1| glutamate racemase [Enterococcus faecalis HH22] Length = 275 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG +WE D L Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFSWEMADFLL 65 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + + VE + + KK + Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESN----QYRSSVAKKIV 168 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222 >gi|119952902|ref|YP_945111.1| glutamate racemase [Borrelia turicatae 91E135] gi|119861673|gb|AAX17441.1| glutamate racemase [Borrelia turicatae 91E135] Length = 254 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 15/208 (7%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+N I+IFDSG+GGL + + + +++YVAD+ FPYG L K ++ L + Sbjct: 4 LKNVIVIFDSGVGGLSYFEYISKRFVKRNYVYVADNKNFPYGEKSSDFLLKEILELILKL 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 Y VIACNTA + D+L +FP + L +V +++ AY + + +++T AT Sbjct: 64 EQMYNVAAIVIACNTASISVYDKLNFSFPVIYTLPSVCLVEE-LAYKR---VILVATHAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLV--SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + CH L+ + L + VE G + KED +K + +E + Sbjct: 120 INSKFIQR-----EKDCHWDLILKPASELVNFVEY---GDRFKEDALKY-LNFLKLEVKA 170 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPV 217 R D++ L CTHY I + PV Sbjct: 171 SRRDMVFLGCTHYLHIKDMIENFLGIPV 198 >gi|89098912|ref|ZP_01171792.1| glutamate racemase [Bacillus sp. NRRL B-14911] gi|89086316|gb|EAR65437.1| glutamate racemase [Bacillus sp. NRRL B-14911] Length = 266 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 11/226 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I I DSG+GGL V +++ +P + +Y+ D PYG + +R + ++ Sbjct: 1 MKQPIGIIDSGVGGLTVAKEVMRQLPNENIVYLGDTARCPYGPRTAEEV-RRFTWQMTEF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + VIACNTA ++ +E++ P + LG + P + A ++S I I+ T Sbjct: 60 LLTQDIKMLVIACNTATAVVLEEIQEKLP-IPVLGVIYPGARAALKVSKSNKIGIIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + ++ VE EY + KK + Sbjct: 119 TVNSKAYEKALKQINRKVCVKPLACPKFVPLVESGEYGSAVA------KKIVAETLKPLR 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 K D ++L CTHYPL+ + + + V + + + AR +L Sbjct: 173 NKDLDTLILGCTHYPLLEPLIKNIMGPGVKVISSGEETAREVSTIL 218 >gi|67921667|ref|ZP_00515185.1| Glutamate racemase [Crocosphaera watsonii WH 8501] gi|67856779|gb|EAM52020.1| Glutamate racemase [Crocosphaera watsonii WH 8501] Length = 281 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 14/226 (6%) Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +++QNS I +FDSG+GGL VL+++ +P+ +Y AD PYG D + ++ L F+ Sbjct: 2 REIQNSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYG---DRSAREILEFVR 58 Query: 69 SDI--LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 + + + + + ++ACNT+ L + +R F + LG + P K AA Q I + Sbjct: 59 EILAWMTQQRVKMVIMACNTSSALAVEAVRQEF-DLPILGVILPGAK--AAVKQGQRIGV 115 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 +STPAT + I + V +E+ + E+ +E + Sbjct: 116 ISTPATAKSQAYRQAIQEINPNAQVWQVGCPPFVPLIEQNRLW-DVHTKEVAREYLTPLL 174 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 D +V CTHY + V + + P V +D + + + A+ Sbjct: 175 ---AHNIDTLVYGCTHYRHLEPVIKTIIPTTVKLVDPASYVVQAAK 217 >gi|160888040|ref|ZP_02069043.1| hypothetical protein BACUNI_00448 [Bacteroides uniformis ATCC 8492] gi|156862539|gb|EDO55970.1| hypothetical protein BACUNI_00448 [Bacteroides uniformis ATCC 8492] Length = 279 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 9/218 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + + Sbjct: 12 IGIFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA + ++L P LG + P ++ TQS + +L+T Sbjct: 71 GCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ +H + + + S VE + + I+K I G + K+ Sbjct: 131 GTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNI-GNLLAKD- 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + D ++L CTH+PL++ +Q P + + + +A Sbjct: 189 TQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVA 226 >gi|259508024|ref|ZP_05750924.1| glutamate racemase [Corynebacterium efficiens YS-314] gi|29839541|sp|Q8FMU6|MURI_COREF RecName: Full=Glutamate racemase gi|259164365|gb|EEW48919.1| glutamate racemase [Corynebacterium efficiens YS-314] Length = 273 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 6/195 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++ Sbjct: 13 IGIFDSGVGGLTVARTIIDQLPHESIIYIGDTANGPYGPLPIARVREHALRIADELVERG 72 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ VIACNTA + R + +PA+++A A T++G + ++ T T+ Sbjct: 73 CKMI-VIACNTASAAFLRDARERYDVPVVEVILPAVRRAVAATRNGKVGVIGTVGTINSG 131 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L + S +H + VE GI +I EG + + D + Sbjct: 132 AYQDLFAASPS-IEVHAAACPRFVDFVER---GIT-SGRQILNIAEGYLEPLQAQGVDTL 186 Query: 196 VLACTHYPLIVHVFR 210 VL CTHYPL+ V + Sbjct: 187 VLGCTHYPLLSGVIQ 201 >gi|326800551|ref|YP_004318370.1| glutamate racemase [Sphingobacterium sp. 21] gi|326551315|gb|ADZ79700.1| Glutamate racemase [Sphingobacterium sp. 21] Length = 276 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 9/219 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL V +++ +P+Y +IY D+ PYG + M + + D Sbjct: 4 IGIFDSGYGGLTVFKEISHTLPQYDYIYFGDNARVPYGTRSYDTVYHYTMECVNHLFD-L 62 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA T+ + +L LG + P + +T S + IL+T Sbjct: 63 GCHLVILACNTASAKALRTIQQKDLPKRTDLRNVLGVIRPTTEIIDRFTISNHVGILATS 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ IH + Q ++ + + VE +K+ I+ ++ Sbjct: 123 GTVNSASYVLEIHKFFPQIKVYQEACPMWVPLVENNEMDSPGARYFVKQHIDRLL--QQS 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++LACTHYPL++ ++ P V + +A+ Sbjct: 181 TEIDAVILACTHYPLLLPTIKEFMPKGVQVISQGSIVAK 219 >gi|160947016|ref|ZP_02094219.1| hypothetical protein PEPMIC_00978 [Parvimonas micra ATCC 33270] gi|158447400|gb|EDP24395.1| hypothetical protein PEPMIC_00978 [Parvimonas micra ATCC 33270] Length = 267 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 7/218 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSGIGGL V++++ ++P +Y D PYG + + KR + L++ Sbjct: 5 SIGVFDSGIGGLTVVKELTKILPNEKIVYFGDTARVPYGTRSEETI-KRFSKECIEFLNQ 63 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +IACNT + + L+ F +P K A+ T++ I ++ T AT+ Sbjct: 64 KDIKALIIACNTVSAVALEMLKELFDIYILGVIIPGSKMASYVTKNKKIGVIGTNATVLS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEGKRTD 193 I S S+ ++ + + VEE + EI E ++ E + D Sbjct: 124 GAYEKCIKSENSENIVYSKACPLFVPIVEE-----GLSNTEIALETAKYYLNELINQDVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 IV+ CTHYP++ + + + + ++ + A + Sbjct: 179 TIVMGCTHYPILENTIKAVVGKDISLVNPAKETANEMK 216 >gi|225351503|ref|ZP_03742526.1| hypothetical protein BIFPSEUDO_03099 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157847|gb|EEG71130.1| hypothetical protein BIFPSEUDO_03099 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 271 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 13/224 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V +++R MP +Y D PYG ++K L I+ ++ Sbjct: 20 IGVFDSGLGGISVAREIRRDMPNERVLYFGDSANAPYGTKSPEQVRK----LSDAIVKRF 75 Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPA 130 Q V + VIACNTA + +ELR + + +G PA+K A + + + +TP Sbjct: 76 VEQGVKAVVIACNTATSAAANELRDKY-DIPIIGMEPALKVACDRGHGNRQRVIVAATPL 134 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+ + + H + VE G D + + F + + Sbjct: 135 TLRERKFAVLMDRFKTD---HTIFPEPCPGLVEIVEHGQLDDHDVVMHTLHQYFDQYDLS 191 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTH+ FR+L P +D ++ R +L Sbjct: 192 TIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVL 235 >gi|203284025|ref|YP_002221765.1| glutamate racemase [Borrelia duttonii Ly] gi|201083468|gb|ACH93059.1| glutamate racemase [Borrelia duttonii Ly] Length = 254 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 13/216 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L++ I+IFDSGIGGL + + + ++IYVAD+ FPYG+ + + + L S + Sbjct: 4 LEDVIVIFDSGIGGLAYFEYISKKLFNRNYIYVADNKNFPYGDKSSNFILNEFLELISKL 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y V V+ACNTA + ++L FP + L +V +K+ + +++T T Sbjct: 64 REIYNIVSIVVACNTASISVYNKLNFNFPIIYTLPSVSLVKELLC----KRVILIATNTT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + ++ HI L+ + A + ++ I E + + ++ E + + Sbjct: 120 INSEFVKKEQNN-----HIDLI--LKSAGELVKFVEYGDIFEKDALEYLKSLKFEVQSTK 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D++ L CTHY I + + PV DN +A Sbjct: 173 RDMVFLGCTHYLHIKDMIESVLEIPV--YDNRKIVA 206 >gi|227875772|ref|ZP_03993900.1| glutamate racemase [Mobiluncus mulieris ATCC 35243] gi|269977417|ref|ZP_06184389.1| glutamate racemase [Mobiluncus mulieris 28-1] gi|306819045|ref|ZP_07452762.1| glutamate racemase [Mobiluncus mulieris ATCC 35239] gi|307700282|ref|ZP_07637322.1| glutamate racemase [Mobiluncus mulieris FB024-16] gi|227843714|gb|EEJ53895.1| glutamate racemase [Mobiluncus mulieris ATCC 35243] gi|269934333|gb|EEZ90895.1| glutamate racemase [Mobiluncus mulieris 28-1] gi|304648238|gb|EFM45546.1| glutamate racemase [Mobiluncus mulieris ATCC 35239] gi|307614493|gb|EFN93722.1| glutamate racemase [Mobiluncus mulieris FB024-16] Length = 293 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 14/225 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+ D PYG +K + + +++ Sbjct: 6 IGIFDSGLGGLTVARAIIDQLPGESVVYIGDTANSPYGTKPVETVKHLALNVMDKLVEHG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L VIACNTA + + R+ + P + + PA+ +A + T +G I +++T Sbjct: 66 VKIL-VIACNTASAAVLFDARARYDRLGIPVLEVIS--PAVHRAVSATHNGKIGVIATST 122 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + +Y Q V++ + VE GI + + K E K G Sbjct: 123 TIATGTYQRALGAY-QQVE---VTAQACPAFVEFVERGITSGSELLAKAREYLEPVKAGG 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLL 234 D +VL CTHYPL+ V + V + +S+ AR R LL Sbjct: 179 -VDTLVLGCTHYPLLTGVINYVMGSEVTLVSSSEETARDVYRTLL 222 >gi|203287567|ref|YP_002222582.1| glutamate racemase [Borrelia recurrentis A1] gi|201084787|gb|ACH94361.1| glutamate racemase [Borrelia recurrentis A1] Length = 254 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 13/216 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L++ I+IFDSGIGGL + + + ++IYVAD+ FPYG+ + + + L S + Sbjct: 4 LEDVIVIFDSGIGGLAYFEYISKKLFNRNYIYVADNKNFPYGDKSSNFILNEFLELISKL 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y V V+ACNTA + ++L FP + L +V +K+ + +++T T Sbjct: 64 REIYNIVSIVVACNTASISVYNKLNFNFPIIYTLPSVSLVKELVF----KRVILIATNTT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + HI L+ + A + ++ I E + + ++ E + + Sbjct: 120 INSEFVKK-----EQNNHIDLI--LKSAGELVKFVEYGDIFEKDALEYLKSLKFEVQSTK 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D++ L CTHY I + + PV DN +A Sbjct: 173 RDMVFLGCTHYLHIKDMIESVLEIPV--YDNRKIVA 206 >gi|315573713|gb|EFU85904.1| glutamate racemase [Enterococcus faecalis TX0309B] gi|315582672|gb|EFU94863.1| glutamate racemase [Enterococcus faecalis TX0309A] Length = 275 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + + VE + + KK + Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESN----QYRSSVAKKIV 168 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222 >gi|29375697|ref|NP_814851.1| glutamate racemase [Enterococcus faecalis V583] gi|81585411|sp|Q836J0|MURI_ENTFA RecName: Full=Glutamate racemase gi|29343158|gb|AAO80921.1| glutamate racemase [Enterococcus faecalis V583] Length = 273 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 64 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 110 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + + VE + + KK + Sbjct: 111 NKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESN----QYRSSVAKKIV 166 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 167 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 220 >gi|228471185|ref|ZP_04055998.1| glutamate racemase [Porphyromonas uenonis 60-3] gi|228307000|gb|EEK16082.1| glutamate racemase [Porphyromonas uenonis 60-3] Length = 281 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 27/222 (12%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++++ I +FDSG GGL +L+K+R +P+Y F+Y+ D+ PYG+ H + + Sbjct: 2 QQIEGPIGVFDSGYGGLTILRKLREQLPQYDFVYLGDNARSPYGSRSMHVVYQFTREAVE 61 Query: 70 DILDKYQPVLSVIACNTAFT-LIKDELRSTFPSM-------AFLGAV-PAIKQAAAYTQS 120 + D P L ++ACNTA ++ + P + LG + P ++ T + Sbjct: 62 KLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTGT 120 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE----- 175 + IL+T T+ SYV++ H ++ + ++ E + Sbjct: 121 KHVGILATEGTVSS-------ESYVAEIHKLYPDMTVVQEACPLWVPIVETGESDSPGTD 173 Query: 176 --IKKEIEGCFIEKEGKRTDVIVLACTHYPLIV-HVFRQLSP 214 ++K +E + E + D I+L CTHYP+++ + R L+P Sbjct: 174 FFVRKHLERLLAQDE--KIDTIILGCTHYPILMPKIQRLLTP 213 >gi|169831664|ref|YP_001717646.1| glutamate racemase [Candidatus Desulforudis audaxviator MP104C] gi|229486275|sp|B1I4X2|MURI_DESAP RecName: Full=Glutamate racemase gi|169638508|gb|ACA60014.1| glutamate racemase [Candidatus Desulforudis audaxviator MP104C] Length = 273 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 15/224 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 + ++ +FDSG+GGL V++++ ++P IY D PYG+ L ++ + FL Sbjct: 3 KGTVGLFDSGVGGLTVVREVSVILPGKRVIYFGDTAHVPYGDKSVDELLSYAERIIGFLC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 S D + ACNT+ + +R F + +G + P +A + +G I +++ Sbjct: 63 SQGADYI-----IFACNTSSAVSLRLMRDRF-QVPMIGLIEPGAAEAVRLSATGRIGLIA 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++ + + + C + ++ L VE E +++ +E + + Sbjct: 117 TEATVKAGAYARAVSALNRNCQVFSQAAPRLVPLVESGESDTPKAEQAVREYLEP--LRE 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +G D ++L CTHYP + V ++ V +D + + R AR Sbjct: 175 QG--IDTLILGCTHYPFLRDVIERVLGPEVVLVDPAAATVRAAR 216 >gi|2462086|emb|CAA70886.1| putative glutamate racemase protein [Bacillus cereus ATCC 10987] Length = 269 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 116/251 (46%), Gaps = 16/251 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD +L VIA NTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLDLNIKML-VIAMNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173 Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244 K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + + Sbjct: 174 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232 Query: 245 FDDHALFLSGK 255 DH +GK Sbjct: 233 -SDHLFLTTGK 242 >gi|172037379|ref|YP_001803880.1| glutamate racemase [Cyanothece sp. ATCC 51142] gi|171698833|gb|ACB51814.1| glutamate racemase [Cyanothece sp. ATCC 51142] Length = 281 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 14/263 (5%) Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +++QNS I +FDSG+GGL VL+++ +P+ +Y AD PYGN E + L F+ Sbjct: 2 REIQNSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGNREASEI---LQFVR 58 Query: 69 SDI--LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 + + + + ++ACNT+ L + +R F + LG + P K AA Q I + Sbjct: 59 EILVWMTQQNVKMVIMACNTSSALALEAVRQEF-DVPILGVILPGAK--AAVKQGKRIGV 115 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 +STPAT + I + + V +E+ + ++ +E + Sbjct: 116 ISTPATAKSQAYRQAIQEINPEAQVWQVGCPQFVPLIEQNRIW-DVYTKQVAQEYLSPLL 174 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 + D ++ CTHY + + + + P + +D + + + A+ L + +T Sbjct: 175 AHD---IDTLIYGCTHYRHLEALIKTIIPPTIKLIDPASYVVQAAKKELELMGLSKTASA 231 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 +SG D R Q G Sbjct: 232 SPTRFAVSGCSDTFSRLSQQWLG 254 >gi|304385230|ref|ZP_07367575.1| glutamate racemase [Pediococcus acidilactici DSM 20284] gi|304328437|gb|EFL95658.1| glutamate racemase [Pediococcus acidilactici DSM 20284] Length = 265 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 15/235 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++ + LMP +++ D+ PYG + K Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKAAKELMPNEAVVFIGDEARVPYGPRPTAEVIK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +D L K VIACNTA L +T P + +G + P + A A T++ Sbjct: 53 -FSQQMADFLVKKDVKALVIACNTATNAAFQILSTTLP-IPVIGVIQPGAQAAVATTRNN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T T++ S + + Q + V+ E ++ E + I+ Sbjct: 111 RIGVIATEGTIKSQAYSTALAALAPQTEVFPVACQSFVELAEHN----QLTTPEALQVID 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + + + D +VL CTH+PL+ + V +D + ++ + +L R Sbjct: 167 QQLVGLKNQGIDTLVLGCTHFPLLAKGIQTAVGDQVKLVDPGVAAVQQLKDVLER 221 >gi|257468044|ref|ZP_05632140.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|317062330|ref|ZP_07926815.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|313688006|gb|EFS24841.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] Length = 263 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 94/201 (46%), Gaps = 20/201 (9%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K +I +FDSG+GG VL+++ L+P + IY D+ PYG + +K+ F D Sbjct: 2 KKNYNIGVFDSGVGGTTVLKRIIELLPNENIIYYGDNGNAPYG---EKTIKEIQGFCL-D 57 Query: 71 ILDKY---QPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 I+D + VIACNTA LIK+ + T P + + P K A + + I Sbjct: 58 IMDFFMMNNCKAVVIACNTATAASLELIKE--KYTVPVIGVIS--PGAKSAVEASTNKCI 113 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +LSTP T ++ I Y ++ L +E G + ED ++ I Sbjct: 114 GVLSTPFTAASNAYADEIAKYSKTAKVYQEGCPELCPMIE---AGWETFED--RETIIKN 168 Query: 184 FIEKEGKRTDVIVLACTHYPL 204 I K + D +VL CTHYP+ Sbjct: 169 HISKFPRNVDTVVLGCTHYPI 189 >gi|227518376|ref|ZP_03948425.1| glutamate racemase [Enterococcus faecalis TX0104] gi|227074054|gb|EEI12017.1| glutamate racemase [Enterococcus faecalis TX0104] Length = 275 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 29/234 (12%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60 Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKR+ L VIACNTA + +E+++ P +P + A T++ Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ T T++ I S + + VE + + KK + Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESN----QYRSSVAKKIV 168 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + K D ++L CTHYPL+ V + + V +D+ LL Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGNHVTLIDSGAETVGEVSMLL 222 >gi|152976904|ref|YP_001376421.1| glutamate racemase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025656|gb|ABS23426.1| glutamate racemase [Bacillus cytotoxicus NVH 391-98] Length = 267 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 120/262 (45%), Gaps = 14/262 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + ++ Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQ-FTWEMTEY 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + VIACNTA ++ +E++ P + +G + P + A T + + ++ T Sbjct: 60 LLALNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTCHVGVIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189 T++ + + S ++ +V S+ VE G E E+ E+ ++ + Sbjct: 119 TVKSGAYEDALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLKH 173 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFD 246 D ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 174 TEIDTLILGCTHYPILGPVIKRVMGEKVQLISSGDETAREVSTILYHSKMLNEGEEQ--S 231 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 DH +GK D+ + FG Sbjct: 232 DHLFLTTGKIDLFKEIASKWFG 253 >gi|259501297|ref|ZP_05744199.1| glutamate racemase [Lactobacillus iners DSM 13335] gi|302190979|ref|ZP_07267233.1| glutamate racemase [Lactobacillus iners AB-1] gi|312870760|ref|ZP_07730867.1| glutamate racemase [Lactobacillus iners LEAF 3008A-a] gi|259167267|gb|EEW51762.1| glutamate racemase [Lactobacillus iners DSM 13335] gi|311093772|gb|EFQ52109.1| glutamate racemase [Lactobacillus iners LEAF 3008A-a] Length = 261 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 37/265 (13%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW--EDHAL 60 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119 R F +L K V+ + CNTA ++ P M +G + + AA+ TQ Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108 Query: 120 SGLISILSTPATLRRTYTSNLIHSYV-------SQCHIHLVSSMILASRVEEYACGIKIK 172 + +++++T AT+ HSYV +Q + + LA VE Sbjct: 109 TNQVAVIATNATVNS-------HSYVKEIAFRNAQIQVTELGEPKLAPLVEANPS----- 156 Query: 173 EDEIKKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 D+IKK + C + + D ++L CTHYPL++ + +D +D +A+ Sbjct: 157 -DKIKKAVVAQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTF 215 Query: 232 CLLPRINTHQTRVFDDHALFLSGKP 256 +L R N + H + +G P Sbjct: 216 NVLKRDNLLAAK-GGKHEYYTTGDP 239 >gi|255530901|ref|YP_003091273.1| glutamate racemase [Pedobacter heparinus DSM 2366] gi|255343885|gb|ACU03211.1| glutamate racemase [Pedobacter heparinus DSM 2366] Length = 279 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 27/255 (10%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 SI +FDSG GGL V + + +P+Y++IY D+ PYG+ + + + + Sbjct: 4 NQSIGVFDSGYGGLTVFKSIASKLPQYNYIYFGDNARTPYGDHSFETIYQYTLECVEWLF 63 Query: 73 DKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 + P L ++ACNTA + ++ L +P LG + P + +T S + ++ Sbjct: 64 AQGCP-LVILACNTASAKALRNIQQNVLPFKYPDRRVLGVIRPTAEIVGDFTLSKHVGVM 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ I+ + + + S + +E + +KK I+ Sbjct: 123 GTRGTVNSESYLMEINKFFPEISVSQQSCPMWVPLIENNEHIAAGADYFVKKYIDELL-- 180 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + + D IVLACTHYPL+V + + P ++ L D +A D Sbjct: 181 AKDNQIDCIVLACTHYPLLVPKIKTILPDHINLLGQDDIVA------------------D 222 Query: 247 DHALFLSGKPDIAMR 261 AL+L P++ R Sbjct: 223 SLALYLENHPEMTDR 237 >gi|207742838|ref|YP_002259230.1| glutamate racemase (n terminal fragment) protein [Ralstonia solanacearum IPO1609] gi|206594232|emb|CAQ61159.1| probable glutamate racemase (n terminal fragment) protein [Ralstonia solanacearum IPO1609] Length = 141 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 2/140 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + + Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCEW 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + L VIACNTA LR ++ +G P +K A A +QS ++ +L+T + Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLATES 121 Query: 131 TLRRTYTSNLIHSYVSQCHI 150 TLR + L+ + C + Sbjct: 122 TLRSDKFARLLGNVSGDCQV 141 >gi|119509564|ref|ZP_01628711.1| glutamate racemase [Nodularia spumigena CCY9414] gi|119465753|gb|EAW46643.1| glutamate racemase [Nodularia spumigena CCY9414] Length = 297 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/250 (27%), Positives = 114/250 (45%), Gaps = 29/250 (11%) Query: 4 DNYPCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 D++ +K+ Q + I +FDSG+GGL VL+++ +P IY D PYG ++ Sbjct: 21 DDHLADKEPQRAPIGVFDSGVGGLTVLRQLYRHLPNESIIYFGDTARLPYG------IRT 74 Query: 63 RLMFL--FSDILDKYQPV---LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAA 116 ++ L +IL+ Q + ++ACNT+ L + +R F S+ +G + P K AA Sbjct: 75 QVEILQYVREILNWMQQQRVKMVIMACNTSSALALEIVRREF-SLPIIGVILPGAK--AA 131 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 Q I +++TPAT + + I + + VS +E+ D Sbjct: 132 VQQGKRIGVIATPATAKSNAYRHAILEMDANVQVWQVSCPEFVPLIEQNRIN-----DPY 186 Query: 177 KKEIEGCFIEKE-GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC--- 232 E+ ++E + D +V CTHYP + + R L P V +D + + A C Sbjct: 187 TTEVARSYLEPLIQQEIDTLVYGCTHYPHLAPILRSLLPSQVKLVDPAVHVV--AACTQE 244 Query: 233 --LLPRINTH 240 LL NTH Sbjct: 245 LELLGLTNTH 254 >gi|302529722|ref|ZP_07282064.1| glutamate racemase [Streptomyces sp. AA4] gi|302438617|gb|EFL10433.1| glutamate racemase [Streptomyces sp. AA4] Length = 266 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 14/256 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + L+P YV D PYG ++ + D+++ Sbjct: 8 IGVFDSGVGGLTVARSILELLPAEQLRYVGDTARNPYGPLPIATAREYALAALDDMVESG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-R 134 L VIACNTA + R + +PA ++AA T +G + ++ T T+R R Sbjct: 68 VKAL-VIACNTASAACLRDARERYDVPVIEVVLPAARRAAVATHTGRVGLIGTEGTVRSR 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++ + + L S + R ++ +I +G D Sbjct: 127 AYD----DAFAAAPDVRLTS--VACPRFVDFVERGITTGRQILGLAQGYLQPLLEAEVDT 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---HALF 251 ++L CTHYPL+ V + + V + ++D A+ +L ++ R D+ H Sbjct: 181 LILGCTHYPLLSGVLQIVMGQDVTLVSSADETAKDLYRVLTELDLLAER--DEPPKHEFL 238 Query: 252 LSGKPDIAMRRLMQGF 267 +G P+ RL Q F Sbjct: 239 ATGSPE-PFARLAQRF 253 >gi|298490221|ref|YP_003720398.1| glutamate racemase ['Nostoc azollae' 0708] gi|298232139|gb|ADI63275.1| glutamate racemase ['Nostoc azollae' 0708] Length = 284 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 11/262 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++ Q +I +FDSG+GGL VL+++ +P IY D PYG + + + + Sbjct: 16 DQNSQPAIGVFDSGVGGLTVLRQIYKQLPNESIIYFGDTAHLPYGIRSQAEILQYVREIL 75 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + + + + ++ACNT+ L + +R F LG V P + AA Q I +++ Sbjct: 76 K-WMQQQRVKMVIMACNTSSALALENVRQEF-DFPILGVVLPGAR--AAVQQGKRIGVIA 131 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TPAT + I + VS +E+ D E+ ++E Sbjct: 132 TPATAKSNAYRQAIMEIQPDVQVWQVSCPEFVPLIEQNRI-----HDPYTTEVAKSYLEP 186 Query: 188 EGKRT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 K+ D +V CTHYP + V L P V +D S + L ++ TR+ Sbjct: 187 LIKQEIDTLVYGCTHYPHLAPVLGALLPSYVKLVDPSVHVVAACAQELDLLSIRNTRLPM 246 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 +SG P + +Q G Sbjct: 247 PTRFAVSGCPQQFAQSGLQWLG 268 >gi|170017584|ref|YP_001728503.1| glutamate racemase [Leuconostoc citreum KM20] gi|169804441|gb|ACA83059.1| Glutamate racemase [Leuconostoc citreum KM20] Length = 289 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 6/193 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N I DSG+GGL V+++ + +P FI++ D PYG + + + + +++ Sbjct: 5 NPIGFVDSGVGGLTVIKEAQKQLPNEQFIFIGDTARMPYGPRPTEEVVRYTFQMANYLVE 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA + +L+ T ++ +G + P A T++ I I++T T+ Sbjct: 65 QKHIKLLVIACNTATARVLSQLQRTL-AIPVIGVIQPGAWAATKTTKNNRIGIIATQGTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 N IH++ I + VE K E + + + + Sbjct: 124 DSGAYDNEIHAFRDDVQITSQAEPEFVQLVESN----KYHEAATRNIVSQHLEHMKSQDV 179 Query: 193 DVIVLACTHYPLI 205 D ++L CTH+PL+ Sbjct: 180 DTLILGCTHFPLL 192 >gi|323351014|ref|ZP_08086671.1| glutamate racemase [Streptococcus sanguinis VMC66] gi|322122738|gb|EFX94447.1| glutamate racemase [Streptococcus sanguinis VMC66] Length = 264 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + K++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ + D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 166 YETLQPLAGQVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|270290961|ref|ZP_06197184.1| glutamate racemase [Pediococcus acidilactici 7_4] gi|270280357|gb|EFA26192.1| glutamate racemase [Pediococcus acidilactici 7_4] Length = 265 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 15/204 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++ + LMP +++ D+ PYG + K Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKAAKELMPNEAVVFIGDEARVPYGPRPTAEVIK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +D L K VIACNTA L +T P + +G + P + A A T++ Sbjct: 53 -FSQQMADFLVKKDVKALVIACNTATNAAFQILSTTLP-IPVIGVIQPGAQAAVATTRNN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T T++ S + + Q + V+ E ++ E + I+ Sbjct: 111 RIGVIATEGTIKSQAYSTALAALAPQTEVFPVACQSFVELAEHN----QLTTPEALQVID 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205 + + + D +VL CTH+PL+ Sbjct: 167 QQLVGLKNQGIDTLVLGCTHFPLL 190 >gi|293401254|ref|ZP_06645398.1| glutamate racemase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305380|gb|EFE46625.1| glutamate racemase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 239 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 4/232 (1%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 +L+++R MP+ ++Y D PYG E + +R + + ++ + VIACNTA Sbjct: 1 MLKELRRWMPKERYLYFGDSAFAPYGEKERDIITQRCLHICDKLVHIGVKAI-VIACNTA 59 Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147 + +ELR +P + +G PA+K A + + +++T TL+ +L+ Y Q Sbjct: 60 TSACVEELRKRYPQLPIVGMEPALKPAVEGKEHQQVIVMATHFTLKEKKFEHLMSRYRKQ 119 Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 I+ + + L VE ++K ++ + D IVL CTH+ Sbjct: 120 HCIYKLPTPKLVEIVEHDQLE---NTTLVEKTLQDYLAPYDLSHIDSIVLGCTHFVFFKE 176 Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA 259 R + V +D + +R + LL NT Q L+ D A Sbjct: 177 QIRHIVKDKVTLVDGNAGTSRHVKELLSEKNTLQKESGHAKVTILNSSDDPA 228 >gi|312792765|ref|YP_004025688.1| glutamate racemase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179905|gb|ADQ40075.1| glutamate racemase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 267 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 13/203 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+ Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDIPIVAVIE--PGAEAAVRATKNKRIGVIGTEGTIA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191 I S + + VEE G KE + KE F EKE Sbjct: 123 SGAFEKKILELDSSLQVFSKPCPLFVPLVEE---GWTDKEVTYLVAKEYLEEFNEKE--- 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 D +VL CTHYP + V +++ P Sbjct: 177 IDTLVLGCTHYPFLQDVIKKVLP 199 >gi|312885977|ref|ZP_07745605.1| glutamate racemase [Mucilaginibacter paludis DSM 18603] gi|311301514|gb|EFQ78555.1| glutamate racemase [Mucilaginibacter paludis DSM 18603] Length = 276 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 9/219 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL V + + L+P+Y +IY+ D+ PYG+ + + + Sbjct: 7 IGVFDSGYGGLTVFRSIAKLLPQYDYIYLGDNSRAPYGSRSFKTIHQYTWECVQHLFKMG 66 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 P L ++ACNTA T+ + +L+ S LG + P + Y+++ I +L T Sbjct: 67 CP-LVILACNTASAKALRTIQQHDLKKHDSSKRVLGVIRPTAEVIGNYSKTKEIGVLGTK 125 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ I ++ +++ + + +E + +K+ ++ I + Sbjct: 126 GTVQSGSYQIEIGNFFPDVNVYQQACPLWVPLIENGEYDKPGADYFVKQYLDQ--ILAQS 183 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 R D ++LACTHYPL+ R P V + D +A+ Sbjct: 184 PRIDTLLLACTHYPLLEQKIRAYLPADVQAVSQGDIVAQ 222 >gi|309803584|ref|ZP_07697676.1| glutamate racemase [Lactobacillus iners LactinV 11V1-d] gi|309806029|ref|ZP_07700055.1| glutamate racemase [Lactobacillus iners LactinV 03V1-b] gi|312872868|ref|ZP_07732930.1| glutamate racemase [Lactobacillus iners LEAF 2062A-h1] gi|312873716|ref|ZP_07733761.1| glutamate racemase [Lactobacillus iners LEAF 2052A-d] gi|325913753|ref|ZP_08176114.1| glutamate racemase [Lactobacillus iners UPII 60-B] gi|308164332|gb|EFO66587.1| glutamate racemase [Lactobacillus iners LactinV 11V1-d] gi|308167632|gb|EFO69785.1| glutamate racemase [Lactobacillus iners LactinV 03V1-b] gi|311090714|gb|EFQ49113.1| glutamate racemase [Lactobacillus iners LEAF 2052A-d] gi|311091602|gb|EFQ49984.1| glutamate racemase [Lactobacillus iners LEAF 2062A-h1] gi|325476953|gb|EGC80104.1| glutamate racemase [Lactobacillus iners UPII 60-B] Length = 261 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 37/265 (13%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW--EDHAL 60 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119 R F +L K V+ + CNTA ++ P M +G + + AA+ TQ Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108 Query: 120 SGLISILSTPATLRRTYTSNLIHSYV-------SQCHIHLVSSMILASRVEEYACGIKIK 172 + +++++T AT+ HSYV +Q + + LA VE Sbjct: 109 TNQVAVIATNATVNS-------HSYVKEIAFRNAQIQVTELGEPKLAPLVEANPS----- 156 Query: 173 EDEIKKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 D+IKK + C + + D ++L CTHYPL++ + +D +D +A+ Sbjct: 157 -DKIKKAVVAQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTF 215 Query: 232 CLLPRINTHQTRVFDDHALFLSGKP 256 +L R N + H + +G P Sbjct: 216 NVLKRDNLLAEK-GGKHEYYTTGDP 239 >gi|114566002|ref|YP_753156.1| glutamate racemase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336937|gb|ABI67785.1| glutamate racemase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 267 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 7/209 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V++ + MP+ FIY D PYGN + L + S ++ K Sbjct: 7 IGIFDSGVGGLTVVKSLMEKMPDESFIYFGDTAHVPYGNKSEQQLFNYAHKIISFLISKQ 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 + ++AC T ++ + + S+ LG V A + AA +++G I + +T AT+ + Sbjct: 67 VKAI-IVACGTHSSVTLPSVLQEY-SLPMLGVVKAGARSAARLSRNGKIGVAATQATVNK 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + I ++ + VE K+ E ++ + + D Sbjct: 125 KAYTREIQELEPDFQVYETACPRFVPLVE----AGKLNNSESREAVAEYLGPLLAQGIDT 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 +VL CTHYP + + + ++ +D S Sbjct: 181 LVLGCTHYPFLATAISEFAGEKLELVDTS 209 >gi|172041148|ref|YP_001800862.1| glutamate racemase [Corynebacterium urealyticum DSM 7109] gi|171852452|emb|CAQ05428.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 288 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 23/231 (9%) Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P ++ N+ I IFDSG+GGL V + + L+P IY+ D PYG+ +++ Sbjct: 15 PEQESHNNAPIGIFDSGVGGLTVARTIVDLLPHESIIYIGDTANSPYGDKTIAQVREYAR 74 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125 + +++ + ++ VIACNTA + R +P +PA+++A + +++ I + Sbjct: 75 MVADELVARGVKMI-VIACNTASAAFMRDARERYPIPVVEVILPAVRRAVSASRNNRIGL 133 Query: 126 LSTPATLRRTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIK 177 + T AT+ +L + + C + V I + R +I Sbjct: 134 IGTQATVTSGAYQDLFAASPDVTAVAQACPQFVPFVERGITSGR-------------QIH 180 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 EG + D +VL CTHYPL+ V + + V +++++ A+ Sbjct: 181 ALAEGYLEPLKEAGVDTVVLGCTHYPLLTGVVQFVMGEDVTLVNSAEETAK 231 >gi|332974650|gb|EGK11567.1| glutamate racemase [Kingella kingae ATCC 23330] Length = 270 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 7/215 (3%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++ Q I +FDSG+GGL V++ + +P + +Y D PYG + +++ + Sbjct: 4 QRKQKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTIEEFTTQIVE 63 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILST 128 +L L VIACNT + +++ ++ L + A QAA A T++ I +++T Sbjct: 64 FLLQNEVKAL-VIACNTIAAVAYKKVQQMAGNIPVLSVIEAGAQAALATTRNNHIGVIAT 122 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + IH+ I ++ +L VEE ++ I + ++ ++ Sbjct: 123 STTVNSNAYARAIHAQNPDTRILSQATPLLVPLVEEGWLDHEVTRLTIHEYLKPLLADQ- 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 D ++L CTH+PL+ + +P+ ++ +D+S Sbjct: 182 ---IDTLILGCTHFPLLKAAIKHEAPY-IELVDSS 212 >gi|332710932|ref|ZP_08430868.1| glutamate racemase [Lyngbya majuscula 3L] gi|332350246|gb|EGJ29850.1| glutamate racemase [Lyngbya majuscula 3L] Length = 298 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 9/256 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL VL+++ +P IY AD PYG + + + S ++ Sbjct: 16 SPIGIFDSGVGGLTVLRELYKQLPSESIIYFADTARLPYGTRSTDEIVQFGFEILSWMVQ 75 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + ++ V+ACNT+ L + LRS F + LG + P + AA Q I +++TPAT Sbjct: 76 QDVKMV-VMACNTSSALALETLRSEF-DIPMLGLILPGAR--AALHQGRRIGVIATPATA 131 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 N I + V VE+ ++ +E + Sbjct: 132 ASNAYRNAILEVEPTAQVWQVGCPEFVPLVEQNRLCEPYTTAVARQYLEPLL----AAQI 187 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +V CTHYP + + R++ P V +D + + A L I T + Sbjct: 188 DTLVYGCTHYPHLEPILREILPPDVKLVDPAKYVVAAAAQELDLIGGKNTGEARPTRFGV 247 Query: 253 SGKPDIAMRRLMQGFG 268 SG P ++ +Q G Sbjct: 248 SGCPQQFAQQSLQWLG 263 >gi|325280786|ref|YP_004253328.1| Glutamate racemase [Odoribacter splanchnicus DSM 20712] gi|324312595|gb|ADY33148.1| Glutamate racemase [Odoribacter splanchnicus DSM 20712] Length = 278 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 48/285 (16%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + SI +FDSG GGL +L+++ +PEY+++Y+ D+ PYG + + + Sbjct: 5 KESIGVFDSGYGGLTILKEIVRKLPEYNYVYLGDNARAPYGARSFEVVYEYTREAVHKLF 64 Query: 73 DKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 + + L ++ACNTA T+ + +L P LG + P+++ Y+Q+G + IL Sbjct: 65 E-MECRLVILACNTASAKALRTIQQVDLPQWDPEKRVLGVIRPSVEALNTYSQNGHVGIL 123 Query: 127 STPATLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEG 182 +T T+ +Y + Y + R+ + AC + ++ +E+ E Sbjct: 124 ATRGTVASGSYPIEVGKLYGEE-----------RFRITQLACPMWVPLVENNELDGEGAI 172 Query: 183 CFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPV--------------DWLD 221 F+ K D I+L CTHYPL+ + + P V D+L Sbjct: 173 YFVRKYIQELLGTDPEIDTIILGCTHYPLLRPLIARFVPSRVKIIGQGQIVAGSLADYLK 232 Query: 222 NSDSIARRARCLLPR--INTHQTRVFDDHA-LFLSGKPDIAMRRL 263 I RR R + T +T +FD A LFL K +I+ +R+ Sbjct: 233 RHPEIDRRLGKDSRRSYLTTEKTELFDRMAGLFL--KEEISSQRI 275 >gi|297568262|ref|YP_003689606.1| glutamate racemase [Desulfurivibrio alkaliphilus AHT2] gi|296924177|gb|ADH84987.1| glutamate racemase [Desulfurivibrio alkaliphilus AHT2] Length = 267 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 5/190 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V + + +P+Y +Y D PYG+ + + +L + Sbjct: 2 IGVFDSGVGGMTVARAIEQALPDYRLVYFGDLARTPYGSKSSDTISRYSCQNVDFLLSRG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACN+A ++ LR+ + F PA+ QAA ++ G + ++ T AT+R Sbjct: 62 AKII-VVACNSAASVAAANLRAAYDLPIFEVIGPAVAQAARFSSRGRVGVIGTRATIRSG 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ + C + + +L VEE + + E K + + ++ D + Sbjct: 121 VYEQLLQQQNAGCRVFSAACPLLVPLVEEG----WLDKRETKMILRRYLAPLKQQQVDTL 176 Query: 196 VLACTHYPLI 205 VL CTHYPL+ Sbjct: 177 VLGCTHYPLL 186 >gi|289809548|ref|ZP_06540177.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 169 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 108 VPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167 +PAIK AA T +G++ +L+T AT++R YT LI + ++C I ++ S L E Sbjct: 1 MPAIKPAARLTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLH 60 Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 G + +E+++ + E D +VL CTH+PL+ Q+ P +D+ +IA Sbjct: 61 GDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIA 118 Query: 228 RRARCLL 234 RR LL Sbjct: 119 RRTAWLL 125 >gi|226941421|ref|YP_002796495.1| glutamate racemase [Laribacter hongkongensis HLHK9] gi|226716348|gb|ACO75486.1| MurI [Laribacter hongkongensis HLHK9] Length = 272 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 16/217 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE----DHALKKRLMFLF 68 + I +FDSGIGGL V++ + +P +Y D PYG H ++ FL Sbjct: 6 RRPIGVFDSGIGGLTVVRALMDRLPFEDILYFGDSARVPYGTKSVATIQHYTREIAEFLL 65 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA--FLGAVPAIKQAA-AYTQSGLISI 125 + + +IACNT + D +RS + L + A QAA A ++SG I + Sbjct: 66 ARDVKAL-----IIACNTMAAVAADVVRSVAEPLGVPVLDVIDAGSQAAVAASRSGEIGV 120 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 ++TP T+ + IH Q ++ + + VEE + ++ ++ + Sbjct: 121 IATPTTINANAYARAIHVMNPQARLYSQACPLFVPLVEEGWLDHPVTRLTAEEYLKTVLV 180 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 E+ D +VL CTHYPL+ + ++ V +D+ Sbjct: 181 EE----VDTLVLGCTHYPLLKPLLADVAGPGVQLVDS 213 >gi|50913675|ref|YP_059647.1| glutamate racemase [Streptococcus pyogenes MGAS10394] gi|68052498|sp|Q5XDP9|MURI_STRP6 RecName: Full=Glutamate racemase gi|50902749|gb|AAT86464.1| Glutamate racemase [Streptococcus pyogenes MGAS10394] Length = 264 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 28/252 (11%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + + Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E+++T + LG V P A T G + ++ TP T Sbjct: 69 I-VFACNTATAVAWEEVKATL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190 + S + + I L++ + +V AC + I E I K+I + Sbjct: 121 ---VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVG 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246 + D +VL CTHYPL+ + + + V +D+ R LL N HQ V Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232 Query: 247 DHALFLSGKPDI 258 +H F + P+I Sbjct: 233 EHRFFTTANPEI 244 >gi|186682253|ref|YP_001865449.1| glutamate racemase [Nostoc punctiforme PCC 73102] gi|186464705|gb|ACC80506.1| glutamate racemase [Nostoc punctiforme PCC 73102] Length = 288 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 18/246 (7%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 +D++ + + I IFDSG+GGL VL+++ +P +Y D PYG + Sbjct: 10 NLDDFSALEPQRAPIGIFDSGVGGLTVLRQIYRQLPNESIVYFGDTARLPYGIRSQAEIL 69 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 + + + L + Q + ++ACNT+ L + +R F ++ LG + P K AA + Sbjct: 70 QFTREILT-WLQQQQVKMVIMACNTSSALALETVRQEF-NIPILGVILPGAK--AAVQEG 125 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +++TPAT + + I + V +E+ D E+ Sbjct: 126 KRIGVIATPATAKSNAYKHAILEIAPDVQVWQVGCPEFVPLIEQNRI-----HDPYTAEV 180 Query: 181 EGCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-----LL 234 ++E + D +V CTHYP + V R L P V +D + + A C LL Sbjct: 181 ARAYLEPLLEQEIDTLVHGCTHYPHLTPVLRSLLPSQVKLVDPAVHVV--AACAQELDLL 238 Query: 235 PRINTH 240 NTH Sbjct: 239 GLKNTH 244 >gi|332528172|ref|ZP_08404203.1| aspartate and glutamate racemase:glutamate racemase [Rubrivivax benzoatilyticus JA2] gi|332112743|gb|EGJ12536.1| aspartate and glutamate racemase:glutamate racemase [Rubrivivax benzoatilyticus JA2] Length = 247 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 7/241 (2%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 +L+ +R +P F+YVAD PYG+ L R + + + L V+ACNT Sbjct: 1 MLRALRARLPAERFVYVADSGHAPYGDRPRPYLLGRAGAVAGFFVAQRAKAL-VLACNTI 59 Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147 + + LR+ ++ + PAIK A A T+SG++ +L+T AT+ L + + Sbjct: 60 SVVAAETLRAHH-ALPIVAMEPAIKPAVAATRSGIVLVLATTATVHSPAVERLCRIWGRE 118 Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 I L L +E+ + + + +E D++VL CTHY + Sbjct: 119 VEILLQPCPGLVELIEQG----RFADPATRTLLERYLRPALDAGADMVVLGCTHYAFVQD 174 Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 R+L+ V ++ SD++AR+ L + SG P+ A+RR ++ Sbjct: 175 EIRRLAGAAVQVIEPSDAVARQLVHRLGPALAPAGAAGASTCYYSSGDPE-ALRRFLELM 233 Query: 268 G 268 G Sbjct: 234 G 234 >gi|163942231|ref|YP_001647115.1| glutamate racemase [Bacillus weihenstephanensis KBAB4] gi|163864428|gb|ABY45487.1| glutamate racemase [Bacillus weihenstephanensis KBAB4] Length = 267 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 116/250 (46%), Gaps = 16/250 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + + Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 61 LDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S ++ + ++ VE ++ + +++ ++ K Sbjct: 119 TVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------K 172 Query: 191 RTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245 TD+ ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 173 STDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 230 Query: 246 DDHALFLSGK 255 DH +GK Sbjct: 231 SDHLFLTTGK 240 >gi|116750432|ref|YP_847119.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB] gi|116750474|ref|YP_847161.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB] gi|116699496|gb|ABK18684.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB] gi|116699538|gb|ABK18726.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB] Length = 275 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 115/257 (44%), Gaps = 11/257 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++I +FDSGIGGL V++ + +P IY D PYG + K ++ L Sbjct: 13 NSAIGVFDSGIGGLTVVRALMERLPFESIIYFGDTARVPYGVKSVDTISK-FAGEITEFL 71 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Q L ++ACNT + ++ + P A T++ + ++ TPAT+ Sbjct: 72 LRQQVKLLIVACNTMAAVAREVIVGLSPVPVLDVIDAGASSAVEATRARYVGVIGTPATI 131 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH + + I + + VEE + ++ + + Sbjct: 132 NSNAYARAIHRHDAGIRIFSQACPLFVPLVEEGWLDHPVTRLTAREYLRPVTTHQ----I 187 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251 D +VL CTHYPL+ + +++ + +D+++++A R +L ++ +++ D+ F Sbjct: 188 DTLVLGCTHYPLLKPLLQKVVGKDIHLVDSAEAMAERTAAVLTEMDLWNRSASPPDYRFF 247 Query: 252 LSGKPDIAMRRLMQGFG 268 +S D+ +R QG G Sbjct: 248 VS---DVPLR--FQGIG 259 >gi|126436408|ref|YP_001072099.1| glutamate racemase [Mycobacterium sp. JLS] gi|126236208|gb|ABN99608.1| glutamate racemase [Mycobacterium sp. JLS] Length = 280 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 7/189 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++++ Sbjct: 14 IFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDDLVERGVK 73 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 L VIACNTA + + R + ++ + + PA+++A A T++G I ++ T AT+ Sbjct: 74 AL-VIACNTASSACLRDARERYAPVSVVEVILPAVRRAVATTRNGRIGVIGTAATI---A 129 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 + ++ + I ++ + R ++ ++ EG + D +V Sbjct: 130 SGAYQDAFAAARDIEVIG--VACPRFVDFVERGVTSGRQVLGLAEGYLEPLQRADVDTLV 187 Query: 197 LACTHYPLI 205 L CTHYP++ Sbjct: 188 LGCTHYPML 196 >gi|209524014|ref|ZP_03272566.1| glutamate racemase [Arthrospira maxima CS-328] gi|209495686|gb|EDZ95989.1| glutamate racemase [Arthrospira maxima CS-328] Length = 284 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 21/218 (9%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLF 68 K I IFDSG+GGL VL+++ +P +Y AD PYG + + R + + Sbjct: 5 KRGQKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITW 64 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + D + ++ACNT+ L + +RS F + LG + P + AA +Q I +++ Sbjct: 65 AVAQDVK---MVLMACNTSSALALEVVRSEF-DIPILGLILPGSR--AAISQGERIGVIA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY----ACGIKIKEDEIKKEIEGC 183 TPAT I + V +E+ C +++ + + I+ Sbjct: 119 TPATAASNAYRQAIQEINPAVQVWQVGCPAFVPLIEQNRIHDPCTLEVAREYLAPLIQ-- 176 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 +R D ++ CTHYP + V R L P V +D Sbjct: 177 ------QRIDTLIYGCTHYPHLAPVLRSLLPASVKLVD 208 >gi|269123416|ref|YP_003305993.1| glutamate racemase [Streptobacillus moniliformis DSM 12112] gi|268314742|gb|ACZ01116.1| glutamate racemase [Streptobacillus moniliformis DSM 12112] Length = 256 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 25/207 (12%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI IFDSG+GG+ VL ++R P+ + D PYG + K + +L K Sbjct: 2 SIGIFDSGMGGITVLNEIRKQYPKLDIHFFGDTARLPYGEKSKEEIIKYSTEIVEFLLTK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR- 133 + L V+ACNTA +L DE++ + ++ +G + A +S + +++T AT+ Sbjct: 62 -EVELIVVACNTATSLALDEIKEKY-NINIIGVIEAGVNGVINNKSKNVGLIATTATVNS 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK------ 187 + YT +L + V+S I ++ E AC + + E I G +I + Sbjct: 120 KKYTQSL----------NFVNSQI---KIIERACPLLVPTIE-NGNINGAYINELINEYV 165 Query: 188 --EGKRTDVIVLACTHYPLIVHVFRQL 212 K D ++L CTHY ++ + L Sbjct: 166 NHMSKEIDTLILGCTHYSILKETIKSL 192 >gi|158333794|ref|YP_001514966.1| glutamate racemase [Acaryochloris marina MBIC11017] gi|158304035|gb|ABW25652.1| glutamate racemase [Acaryochloris marina MBIC11017] Length = 264 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 31/247 (12%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL--DKYQPV-L 79 +GGL VL++++ +P F+Y D PYG + ++ IL QP+ + Sbjct: 1 MGGLTVLKELQQQLPNESFLYFGDTANVPYGTRS----QAEILGFVRQILCWMTSQPIKM 56 Query: 80 SVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTS 138 +++ACNT+ L DE+R+ F + LG + P + AA Q I +++TPAT+ Sbjct: 57 AIMACNTSSALALDEVRAEF-DIPILGIILPGAR--AAVKQGKRIGVIATPATV------ 107 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACG--------IKIKEDEIKKEIEGCFIEKEGK 190 S+ + + + ++V + AC +I+E E + + + Sbjct: 108 ------ASESYPQAIQEVNTTAKVFQEACPEFVPLIEHNRIREPETLQIVHQHLHPLLQQ 161 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +V CTHYP + V RQ+ P V +D + I A+ L + Sbjct: 162 GIDTLVYGCTHYPHLSGVIRQVLPSHVKTVDPAVYITTAAKQELKLLQLQNGHAAQTTRF 221 Query: 251 FLSGKPD 257 F+SG P+ Sbjct: 222 FVSGCPE 228 >gi|332978147|gb|EGK14883.1| glutamate racemase [Desmospora sp. 8437] Length = 206 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 8/204 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 ++I I DSG+GGL V++++ +P +Y D + PYG + +R L Sbjct: 9 SAIGILDSGVGGLTVVREVFRQLPNEKILYFGDTLRCPYGPRSSDEV-RRFTLEIVRHLS 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 Y VIACNTA L +E+R + LG + P + A ++ G + ++ T T+ Sbjct: 68 GYPLKALVIACNTATALALEEVRHQV-DVPVLGVIEPGARAAIKVSRRGRVGVIGTEGTI 126 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + + + ++ + L VE ++ +E +K + + R Sbjct: 127 RSSAYERALKRIDPRLYVVSLPCPALVPLVESGG----VENEESRKILRESLAPLKSHRL 182 Query: 193 DVIVLACTHYPLIVHVF-RQLSPW 215 + ++L CTHYPLI + R++ P Sbjct: 183 ESLILGCTHYPLIASMISREMGPG 206 >gi|315653048|ref|ZP_07905976.1| glutamate racemase [Lactobacillus iners ATCC 55195] gi|315489583|gb|EFU79217.1| glutamate racemase [Lactobacillus iners ATCC 55195] Length = 261 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 37/265 (13%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW--EDHAL 60 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119 R F +L K V+ + CNTA ++ P M +G + + AA+ TQ Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108 Query: 120 SGLISILSTPATLRRTYTSNLIHSYV-------SQCHIHLVSSMILASRVEEYACGIKIK 172 + +++++T AT+ HSYV +Q + + LA VE Sbjct: 109 TNQVAVIATNATVNS-------HSYVKEIAFRNAQIQVTELGEPKLAPLVEANPS----- 156 Query: 173 EDEIKKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 D+IKK + C + + D ++L CTHYPL++ + +D +D +A+ Sbjct: 157 -DKIKKAVVAQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTF 215 Query: 232 CLLPRINTHQTRVFDDHALFLSGKP 256 +L R N + H + +G P Sbjct: 216 NVLKRDNLLGEK-GGKHEYYTTGDP 239 >gi|255659131|ref|ZP_05404540.1| glutamate racemase [Mitsuokella multacida DSM 20544] gi|260848578|gb|EEX68585.1| glutamate racemase [Mitsuokella multacida DSM 20544] Length = 260 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 16/219 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I FDSGIGGL VL ++P+ F++ AD+ PYG +K + F D L Sbjct: 2 KIAFFDSGIGGLSVLHHAMRVLPKEQFVFYADEDNVPYGVKTTDEVKGFVQQAF-DFLVG 60 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA ++ E+R + + +G PA K+A + + +TP T+ Sbjct: 61 CDVKAIVVACNTATSVAVREMRHRY-DIPIIGMEPAAKKALDLDGEHRVLVAATPITVHG 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR--- 191 LI + HLV + L R+ E+A + +E + E ++ +E R Sbjct: 120 KKMQILIDRFDKD---HLVDLLPL-PRLVEFA-----EREEFRSEAVHAYLAQELGRFHL 170 Query: 192 --TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTH+ R++ P + ++D ++ R Sbjct: 171 ADYSALVLGCTHFNYFKDTMREIMPENMHFVDGNEGTVR 209 >gi|25011689|ref|NP_736084.1| glutamate racemase [Streptococcus agalactiae NEM316] gi|77407235|ref|ZP_00784198.1| glutamate racemase [Streptococcus agalactiae H36B] gi|77414377|ref|ZP_00790532.1| glutamate racemase [Streptococcus agalactiae 515] gi|29839529|sp|Q8E3V7|MURI_STRA3 RecName: Full=Glutamate racemase gi|24413229|emb|CAD47308.1| Unknown [Streptococcus agalactiae NEM316] gi|77159567|gb|EAO70723.1| glutamate racemase [Streptococcus agalactiae 515] gi|77174157|gb|EAO77063.1| glutamate racemase [Streptococcus agalactiae H36B] Length = 264 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 14/257 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I DSG+GGL V+++M +PE I++ D PYG +++ + + +L K Sbjct: 6 IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLTKN 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 ++ VIACNTA + E++ + LG + P A T SG + I+ TP T++ Sbjct: 66 VKMI-VIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNSGKVGIIGTPMTVKS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I + + ++ VE ++ KK + GK D Sbjct: 124 DAYRQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKVVYETLSPLVGK-LDT 178 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHALFL 252 ++L CTHYPL+ + + + V +D+ R LL IN + H + Sbjct: 179 LILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHFYT 238 Query: 253 SGKP----DIAMRRLMQ 265 + P +IA + L Q Sbjct: 239 TASPKGFKEIAEQWLSQ 255 >gi|260905616|ref|ZP_05913938.1| glutamate racemase [Brevibacterium linens BL2] Length = 268 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 21/224 (9%) Query: 35 LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94 L P I D PYG+ AL+ R + + +L ++P VIACNTA + Sbjct: 23 LAPHADLILAMDPDFTPYGSLSPEALEARALN-SAAVLAAWEPDAIVIACNTASVQALET 81 Query: 95 LRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV 153 +R+ + P + +G VPA+K AA Q +I +TPAT Y NLI ++ ++ + V Sbjct: 82 VRARYEPDIPVIGTVPAVKMAAGTGQD--FAIWATPATTGSAYQQNLIDTFAAEVAVSPV 139 Query: 154 SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 + LA + E I I+ +++ + IVL CTHY L+ Sbjct: 140 ACPGLAEAINEADIAT------IDSAIDAA-LDQMDPGMETIVLGCTHYGLVAERIMAAR 192 Query: 214 PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 + D+ +A++ L RI D H + G+PD Sbjct: 193 AGAITLFDSPIPVAKQ---TLRRIG------IDAHGVG-PGQPD 226 >gi|218782867|ref|YP_002434185.1| glutamate racemase [Desulfatibacillum alkenivorans AK-01] gi|218764251|gb|ACL06717.1| glutamate racemase [Desulfatibacillum alkenivorans AK-01] Length = 264 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 5/212 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL V + + L P + Y D PYG + + + +LD+ Sbjct: 2 IGIFDSGIGGLTVARAVMELFPHLNICYFGDTARTPYGTKSKDTVTRYAVENTRFLLDQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA + LR F F PA+ A + ++ I ++ T T+ Sbjct: 62 AKII-VVACNTASAVAVPTLRERFDVPIFEVISPAVDMALSLAKAKRIGVIGTRGTINSG 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI + + +L S VEE +K+ E + ++ + ++ + Sbjct: 121 IYERLIKERDPERKVFSEPCPLLVSLVEEGW----LKKPETRMIVKKYLHPLKAQQIQSL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 +L CTHYP+I + + V +D+S++++ Sbjct: 177 ILGCTHYPIIKQLIARKIGKRVKIVDSSEAVS 208 >gi|307325961|ref|ZP_07605160.1| Glutamate racemase [Streptomyces violaceusniger Tu 4113] gi|306888453|gb|EFN19440.1| Glutamate racemase [Streptomyces violaceusniger Tu 4113] Length = 259 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 80/193 (41%), Gaps = 11/193 (5%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSGIG L MR L P+ + +D P+G + + L + ++P Sbjct: 1 MDSGIGLLPTAAAMRRLRPDADLLLSSDPATMPWGPRTPEDVTE-LALGCARAAAAHRPD 59 Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 ++ACNTA LR+ P + +G VPAIK AAA G I+I +TPAT Y Sbjct: 60 ALIVACNTASVHALPALRAELEPVLPVVGTVPAIKPAAA--GGGPIAIWATPATTGSPYQ 117 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 LI + + V LA V+ +DE + + +VL Sbjct: 118 RGLIRDFADGVEVTEVPCPGLADAVQH-------ADDEGIDAAVAAAAARTPREVTTVVL 170 Query: 198 ACTHYPLIVHVFR 210 CTHY L+ R Sbjct: 171 GCTHYELVADRIR 183 >gi|294501442|ref|YP_003565142.1| glutamate racemase [Bacillus megaterium QM B1551] gi|294351379|gb|ADE71708.1| glutamate racemase [Bacillus megaterium QM B1551] Length = 264 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 26/258 (10%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + + Sbjct: 1 MSRPIGVIDSGVGGLTVAKEIMRQLPKEQIMYIGDTARCPYGPRPSEEVRAFTWEMTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + K +L VIACNTA ++ DE++ + +G + P + A T++ I ++ T Sbjct: 61 VGKDIKML-VIACNTATAVVLDEIQEQL-DIPVIGVIEPGSRAALKVTKNHKIGVIGTNG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ SQ + H + ++ VE AC + + E EG ++ K Sbjct: 119 TVK------------SQAYTHALRALHTRVEVENLACPLFVPLVE-SGNYEGPEAQRIVK 165 Query: 191 RT---------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 T D ++L CTHYPL+ V ++ V + + + A +L N Sbjct: 166 ETLKPFYHTDMDTLILGCTHYPLLKPVIQEAIGPRVQLISSGEETAIEVSAILSYSNLLA 225 Query: 242 TRVFD-DHALFLSGKPDI 258 R + +H F +G ++ Sbjct: 226 PRNMEPEHYFFTTGSTEL 243 >gi|23016272|ref|ZP_00056030.1| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1] Length = 273 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 6/214 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R +P+ IY+ D PYG + + + L Y Sbjct: 9 IGIFDSGVGGLTVLKAVRERLPDESLIYLGDTARLPYGTKSAQTVAAYALEA-TRALVAY 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 ++A NT+ + +R+ FP + +G V P AA + G I +++T + ++ Sbjct: 68 GIKALLVADNTSSAHALEAVRAAFPGLPVIGVVEPGAAAAATASARGRIVVIATESAVQA 127 Query: 135 -TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +Y ++HS + L + + VEE I E + + F E D Sbjct: 128 GSYPRAILHSRPNALVTQLPCPLFV-PMVEEGLVDGPIAEQIARHYLGPLFTGPEA--AD 184 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 ++L CTH+P + +FR+L V +D++ + A Sbjct: 185 CLLLGCTHFPALAPLFRRLLGRDVAVVDSASTTA 218 >gi|319745525|gb|EFV97827.1| glutamate racemase [Streptococcus agalactiae ATCC 13813] Length = 290 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 22/272 (8%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 +K+D+ P I DSG+GGL V+++M +PE I++ D PYG + Sbjct: 25 IKMDSRP--------IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQI 76 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 ++ + + +L K ++ VIACNTA + E++ + LG + P A T Sbjct: 77 REFTWQMVNFLLTKNVKMI-VIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTN 134 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 SG + I+ TP T++ I + + ++ VE ++ KK Sbjct: 135 SGKVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKV 190 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RI 237 + GK D ++L CTHYPL+ + + + V +D+ R LL I Sbjct: 191 VYETLSPLVGK-LDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEI 249 Query: 238 NTHQTRVFDDHALFLSGKP----DIAMRRLMQ 265 N + H + + P +IA + L Q Sbjct: 250 NHNWQNKHGGHHFYTTASPKGFKEIAEQWLSQ 281 >gi|148272474|ref|YP_001222035.1| glutamate racemase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830404|emb|CAN01339.1| murI [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 294 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 14/194 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + L+P Y+ D PYG+ +++ + + D++++ Sbjct: 6 IGIFDSGVGGLTVARAVATLLPRESITYIGDTAHTPYGDKPIADVRRYALAVLDDLVERG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134 +L VIACNTA + + R + PA++ A + T++ + +++T AT+ R Sbjct: 66 VKML-VIACNTASAAMLRDARERYDIPVVEVIQPAVRTAVSVTRNHRVGVIATHATVTSR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKR 191 Y ++ + H+ L S + ++ ++ E+ EG Sbjct: 125 AYDD----AFAAAPHLELTS-----AEAPDFVAFVERGVTSGPELMAAAEGYLAPLRAAG 175 Query: 192 TDVIVLACTHYPLI 205 D +VL CTHYP + Sbjct: 176 IDTLVLGCTHYPFL 189 >gi|325911946|ref|ZP_08174349.1| glutamate racemase [Lactobacillus iners UPII 143-D] gi|325476248|gb|EGC79411.1| glutamate racemase [Lactobacillus iners UPII 143-D] Length = 261 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 37/265 (13%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WEDHAL 60 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119 R F +L K V+ + CNTA ++ P M +G + + AA+ TQ Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108 Query: 120 SGLISILSTPATLRRTYTSNLIHSYV-------SQCHIHLVSSMILASRVEEYACGIKIK 172 + +++++T AT+ HSYV +Q + + LA VE Sbjct: 109 TNQVAVIATNATVNS-------HSYVKEIAFRNAQIQVTELGEPKLAPLVEANPS----- 156 Query: 173 EDEIKKE-IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 D+IKK + C + + D ++L CTHYPL++ + +D +D +A+ Sbjct: 157 -DKIKKAVVVQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTF 215 Query: 232 CLLPRINTHQTRVFDDHALFLSGKP 256 +L R N + H + +G P Sbjct: 216 NVLKRDNLLAAK-GGKHEYYTTGDP 239 >gi|255067504|ref|ZP_05319359.1| glutamate racemase [Neisseria sicca ATCC 29256] gi|255048299|gb|EET43763.1| glutamate racemase [Neisseria sicca ATCC 29256] Length = 269 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPAT 131 + L VIACNT + ++R +M L + A QAA T S I I++T T Sbjct: 66 ENDVKAL-VIACNTIAAVAGQKIRQKAGNMPVLDVISAGAQAALNTTSNNKIGIIATNTT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH+ + ++ +L VEE ++ +++ ++ ++ Sbjct: 125 VNSNAYARAIHAQNPDTLVRTQATPLLVPLVEEGWLDHEVTRLTVREYLKPLLVDD---- 180 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 181 IDTLVLGCTHFPLL 194 >gi|282858901|ref|ZP_06268041.1| glutamate racemase [Prevotella bivia JCVIHMP010] gi|282588283|gb|EFB93448.1| glutamate racemase [Prevotella bivia JCVIHMP010] Length = 294 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 13/210 (6%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 N P + SI +FDSG GGL +L ++ ++PEY +IY+ D+ PYG+ + + Sbjct: 15 NMPFYPQQPGSIGVFDSGYGGLTILHGIQQVLPEYDYIYLGDNARAPYGS---RSFEVVY 71 Query: 65 MFLFSDILDKYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAA 116 F +L ++ L ++ CNTA T+ +++L P LG + P + + Sbjct: 72 EFTRQAVLKLFEMGCHLVILGCNTASAKALRTIQQNDLPKLAPDRRVLGVIRPTAEVIGS 131 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T S + IL+T T+R + I + +S + +E + + Sbjct: 132 LTSSRHVGILATEGTIRSQSYNIEIQKQSPDIQVTGLSCPLWVPIIENNEADSPGADYFV 191 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 KK I+ I + + D ++L CTHYP+++ Sbjct: 192 KKRID--HIMRLDPQIDTLILGCTHYPILM 219 >gi|256789389|ref|ZP_05527820.1| glutamate racemase [Streptomyces lividans TK24] gi|289773278|ref|ZP_06532656.1| glutamate racemase [Streptomyces lividans TK24] gi|289703477|gb|EFD70906.1| glutamate racemase [Streptomyces lividans TK24] Length = 280 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 79/196 (40%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ I D G P+G L R + + + Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPKDLTGRALAVAE-AAAAH 80 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT Sbjct: 81 RPDALIVGCNTATVHALPALRARLEPDVPVIGTVPAIKPAAA--GGGPVAIWATPATTGS 138 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE ++ E Sbjct: 139 PYQRGLIEDFAGDTEVTEVPCPGLADAVEH-------ADETAITEAVAAAAALTPDDVTT 191 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 192 VVLGCTHYELVAERIR 207 >gi|330718035|ref|ZP_08312635.1| glutamate racemase [Leuconostoc fallax KCTC 3537] Length = 238 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 12/196 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GG+ L+ + ++P FI+ D + PYG+ +++ L ++ Sbjct: 4 KQPIGVFDSGVGGISTLRVLTQMLPNEDFIFFGDSLHAPYGS----KTAGQVVDLSQKVV 59 Query: 73 DKY--QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 D Q V + VIACNTA + K L +P++ +G PA+K+A ++ +L T Sbjct: 60 DTLLAQNVKAIVIACNTATSSAKPWLVDHYPNVPIIGIEPALKEAVDDGHQDIL-VLGTA 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TL + Y HI ++ LA +E+ G K + +IK + F + + Sbjct: 119 LTLSLPKFQTQLDQYQENHHITVLPCPGLADLIEQ---GDK-RLTDIKALLIDLFKDIQN 174 Query: 190 KRTDVIVLACTHYPLI 205 + +VL CTHYP I Sbjct: 175 RSFSAVVLGCTHYPFI 190 >gi|261363930|ref|ZP_05976813.1| glutamate racemase [Neisseria mucosa ATCC 25996] gi|288567943|gb|EFC89503.1| glutamate racemase [Neisseria mucosa ATCC 25996] Length = 269 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + L VIACNT + ++R +M L + A QAA T++ I I++T T Sbjct: 66 ENDVKAL-VIACNTIAAVAGQKIRQKAGNMPVLDVISAGAQAALNTTRNNKIGIIATNTT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH+ + ++ +L VEE ++ +++ ++ ++ Sbjct: 125 VNSNAYARAIHAQNPDTLVRTQATPLLVPLVEEGWLDHEVTRLTVREYLKPLLVDD---- 180 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 181 IDTLVLGCTHFPLL 194 >gi|254415880|ref|ZP_05029637.1| glutamate racemase [Microcoleus chthonoplastes PCC 7420] gi|196177307|gb|EDX72314.1| glutamate racemase [Microcoleus chthonoplastes PCC 7420] Length = 287 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 9/216 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++ +P +Y AD PYG + + + + ++++ Sbjct: 18 IGVFDSGVGGLTVLRELYRQLPHESILYFADTARLPYGTRSPREIIQFGREILTWMVEQD 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPATLRR 134 ++ V+ACNT+ L D LR F + LG + + + A Q G I +++TPAT Sbjct: 78 VKMV-VLACNTSDALALDTLRREF-QLPILGLI--LPGSRAAVQVGRRIGVIATPATAAS 133 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + VS VE+ ++ E + +R D Sbjct: 134 NAYRRALLEVEPTAQVWQVSCPEFVPLVEQN----RLYEPYTSEVALQYLTPLLQQRIDT 189 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 ++ CTHYPL+ V RQ+ P V +D ++ + A Sbjct: 190 LIYGCTHYPLLAPVLRQILPASVQLIDPAEHVVAAA 225 >gi|159036256|ref|YP_001535509.1| glutamate racemase [Salinispora arenicola CNS-205] gi|157915091|gb|ABV96518.1| glutamate racemase [Salinispora arenicola CNS-205] Length = 293 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 12/246 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+ D PYG +++ + ++D Sbjct: 6 IGIFDSGVGGLTVARALTDQLPGEDLVYLGDTAHVPYGPKPIADVRRHALACLDQLMDAG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +L VIACN+A + R + PA+++A A T++G + ++ T AT+ Sbjct: 66 AKLL-VIACNSAAAACLHDARERYSVPVVEVIRPAVRRAVAATRNGRVGVIGTSATI--- 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + ++ + HI V+ + VE GI + + D + Sbjct: 122 TSGAYEDAFAAAPHI-TVTGVACPEFVEFVERGIT-SGSALHSIAQRYLTPLRASGIDTL 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-----PRINTHQTRVFDDHAL 250 VL CTHYPL+ + + V + ++D A++ LL PR ++R H Sbjct: 180 VLGCTHYPLLAGLLNLVMGNGVTLVSSADEAAKKVYRLLTEGVVPRRADDESRPA-RHRF 238 Query: 251 FLSGKP 256 +G P Sbjct: 239 IATGDP 244 >gi|86607856|ref|YP_476618.1| glutamate racemase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556398|gb|ABD01355.1| glutamate racemase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 287 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 96/216 (44%), Gaps = 33/216 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I +FDSG+GGL V + +R +P+ IY D PYG + + ++ L F+ IL Sbjct: 15 IGVFDSGLGGLTVWRALRRRLPQERLIYFGDTARLPYG---ERSPEEILAFV-RQILTWM 70 Query: 74 KYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + QPV L V+ACNT+ L D +R F ++ LG + Q AA Q I +L+T AT+ Sbjct: 71 QAQPVKLVVMACNTSSALALDHVRQEF-ALPVLGLILPGAQ-AALAQGSRIGVLATVATV 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + S I Y + + E AC E IE +++ R Sbjct: 129 KSRAYSRAIQEYSALDPKRFPYPVY----CWEQAC------PEFVPLIEAGWLDSPALRQ 178 Query: 193 --------------DVIVLACTHYPLIVHVFRQLSP 214 D +V CTHYPL+ + + L P Sbjct: 179 AAERYLQPLLQQGIDTLVYGCTHYPLLDPILKPLLP 214 >gi|309809660|ref|ZP_07703516.1| glutamate racemase [Lactobacillus iners SPIN 2503V10-D] gi|308170020|gb|EFO72057.1| glutamate racemase [Lactobacillus iners SPIN 2503V10-D] Length = 261 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 37/265 (13%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WEDHAL 60 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119 R F +L K V+ + CNTA ++ P M +G + + AA+ TQ Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108 Query: 120 SGLISILSTPATLRRTYTSNLIHSYV-------SQCHIHLVSSMILASRVEEYACGIKIK 172 + +++++T AT+ HSYV +Q + + LA VE Sbjct: 109 TNQVAVIATNATVNS-------HSYVKEIAFRNAQIQVTELGEPKLAPLVEANPS----- 156 Query: 173 EDEIKKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 D+IKK + C + + D ++L CTHYPL++ + +D +D +A+ Sbjct: 157 -DKIKKVVVAQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTF 215 Query: 232 CLLPRINTHQTRVFDDHALFLSGKP 256 +L R N + H + +G P Sbjct: 216 NVLKRDNLLAEK-GGKHEYYTTGDP 239 >gi|300814837|ref|ZP_07095071.1| glutamate racemase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511033|gb|EFK38299.1| glutamate racemase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 270 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 7/199 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI FDSG+GGL VL+ +P +IY D + PYG + +R + Sbjct: 5 SIGFFDSGVGGLSVLKVSLGEIPRESYIYYGDTLRMPYGVRSKEDI-ERYTCQAMEFFRS 63 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++VIACNTA + R F F PA+K++ ++S +++L+T T+ Sbjct: 64 KNVKMAVIACNTATCYGIKKARELFDFPIFGVVEPAVKESLHKSKSKKVALLATEGTVNS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTD 193 SY S +I + L +E DE+ + +++K E D Sbjct: 124 GVYDKFFESYSSNIYIKEIGCPDLVLAIENGDL-----RDEVIVPVINKYLDKFEDFEYD 178 Query: 194 VIVLACTHYPLIVHVFRQL 212 ++L CTH+P++ + F+++ Sbjct: 179 TLILGCTHFPIVENTFKRI 197 >gi|312126950|ref|YP_003991824.1| glutamate racemase [Caldicellulosiruptor hydrothermalis 108] gi|311776969|gb|ADQ06455.1| glutamate racemase [Caldicellulosiruptor hydrothermalis 108] Length = 267 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 13/203 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+ Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDIPIVAVIE--PGAEAAVRATKNKKIGVIGTEGTVA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191 I S + + VEE G KE + KE F EKE Sbjct: 123 SGAFKKKILELDSSIKVFSKPCPLFVPLVEE---GWTDKEVTYLVAKEYLEEFNEKE--- 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 D +VL CTHYP + V +++ P Sbjct: 177 IDTLVLGCTHYPFLQDVIKKVLP 199 >gi|295706790|ref|YP_003599865.1| glutamate racemase [Bacillus megaterium DSM 319] gi|294804449|gb|ADF41515.1| glutamate racemase [Bacillus megaterium DSM 319] Length = 264 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 26/258 (10%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + + Sbjct: 1 MSRPIGVIDSGVGGLTVAKEIMRQLPKEQIMYIGDTARCPYGPRPSEEVRAFTWEMTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + K +L VIACNTA ++ DE++ + +G + P + A T++ I ++ T Sbjct: 61 IAKDIKML-VIACNTATAVVLDEIQEQL-DIPVIGVIEPGSRAALKVTKNHKIGVIGTNG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ SQ + H + ++ VE AC + + E EG ++ K Sbjct: 119 TVK------------SQAYTHALRALHTRVEVENLACPLFVPLVE-SGNYEGPEAQRIVK 165 Query: 191 RT---------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 T D ++L CTHYPL+ V ++ V + + + A +L N Sbjct: 166 ETLKPFYHTDMDTLILGCTHYPLLKPVIQEAIGPRVQLISSGEETAIEVSAILSYSNLLA 225 Query: 242 TRVFD-DHALFLSGKPDI 258 R + +H F +G ++ Sbjct: 226 PRNMEPEHYFFTTGSTEL 243 >gi|329919573|ref|ZP_08276562.1| glutamate racemase [Lactobacillus iners SPIN 1401G] gi|328937378|gb|EGG33800.1| glutamate racemase [Lactobacillus iners SPIN 1401G] Length = 261 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 29/261 (11%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WEDHAL 60 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119 R F +L K V+ + CNTA ++ P M +G + + AA+ TQ Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK---EDEI 176 + +++++T AT+ HSYV + I ++ I + + E ++ DEI Sbjct: 109 TNQVAVIATNATVNS-------HSYVKE--IAFRNAQIQVTELGEPKLAPLVEANPSDEI 159 Query: 177 KKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 K + C + + D ++L CTHYPL++ + +D +D +A+ +L Sbjct: 160 KMAVVAQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLK 219 Query: 236 RINTHQTRVFDDHALFLSGKP 256 R N + H + +G P Sbjct: 220 RDNLLAEK-GGKHEYYTTGDP 239 >gi|237737770|ref|ZP_04568251.1| glutamate racemase [Fusobacterium mortiferum ATCC 9817] gi|229419650|gb|EEO34697.1| glutamate racemase [Fusobacterium mortiferum ATCC 9817] Length = 262 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 12/196 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + SI +FDSG+GG VL+++ ++P + Y D PYG +++ L + D Sbjct: 5 KQSIGVFDSGVGGTTVLKEILSILPNENIFYYGDSKNSPYGQKSAEEIRE-LCYKILDFF 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + V+ACNTA D L++ + S+ +G + A +K+A + + I+IL+TP T Sbjct: 64 IANECKAVVVACNTATAAALDSLKNRY-SIPIIGVIDAGVKRALKVSSNNKINILATPFT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE--GCFIEKEG 189 + +Y+++ + + + E+ I+ + K E I+ Sbjct: 123 VSS-------KAYITKFNKISKNISVTQEGCPEFCTMIETGWETHKDRYELLKNHIDNLS 175 Query: 190 KRTDVIVLACTHYPLI 205 K+ D ++L CTHYP+I Sbjct: 176 KKADTLILGCTHYPII 191 >gi|153853948|ref|ZP_01995281.1| hypothetical protein DORLON_01272 [Dorea longicatena DSM 13814] gi|149753330|gb|EDM63261.1| hypothetical protein DORLON_01272 [Dorea longicatena DSM 13814] Length = 316 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 17/205 (8%) Query: 8 CEKKLQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 E K +N+ I +FDSG+GGL V +++ +P + +Y D PYG + K + Sbjct: 44 VENKNRNTAAIGVFDSGVGGLTVTREIMRQLPNENVVYFGDTARVPYG-----SKSKNNI 98 Query: 66 FLFSDILDKYQPVLSV----IACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS 120 FS + ++ +V IACNTA L + ++ F + +G VP + A T++ Sbjct: 99 IRFSRQIIRFLKTKNVKAIVIACNTASALALETVQQEF-DIPIIGVIVPGARAAVRETRN 157 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G I +L T AT++ + I + + + + VEE KI E+ I + Sbjct: 158 GQIGVLGTEATIKSETYTKEIRKLMPEAEVIGKPCPLFVPLVEEGFAKHKITEEVIDIYL 217 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLI 205 + D ++L CTHYPL+ Sbjct: 218 S----DMRKSEIDTLILGCTHYPLL 238 >gi|108800810|ref|YP_641007.1| glutamate racemase [Mycobacterium sp. MCS] gi|119869950|ref|YP_939902.1| glutamate racemase [Mycobacterium sp. KMS] gi|108771229|gb|ABG09951.1| Glutamate racemase [Mycobacterium sp. MCS] gi|119696039|gb|ABL93112.1| glutamate racemase [Mycobacterium sp. KMS] Length = 280 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 7/189 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++++ Sbjct: 14 IFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDDLVERGVK 73 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 L VIACNTA + + R + + + + PA+++A A T++G I ++ T AT+ Sbjct: 74 AL-VIACNTASSACLRDARERYAPVPVVEVILPAVRRAVATTRNGRIGVIGTAATI---A 129 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 + ++ + I ++ + R ++ ++ EG + D +V Sbjct: 130 SGAYQDAFAAARDIEVIG--VACPRFVDFVERGVTSGRQVLGLAEGYLEPLQRADVDTLV 187 Query: 197 LACTHYPLI 205 L CTHYP++ Sbjct: 188 LGCTHYPML 196 >gi|321312372|ref|YP_004204659.1| glutamate racemase [Bacillus subtilis BSn5] gi|320018646|gb|ADV93632.1| glutamate racemase [Bacillus subtilis BSn5] Length = 271 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 55/248 (22%), Positives = 111/248 (44%), Gaps = 7/248 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE K ++ +K + + Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKTSL----YPLKDT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ DH Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSANAPDHQ 235 Query: 250 LFLSGKPD 257 +G D Sbjct: 236 FLTTGARD 243 >gi|312876812|ref|ZP_07736790.1| glutamate racemase [Caldicellulosiruptor lactoaceticus 6A] gi|311796431|gb|EFR12782.1| glutamate racemase [Caldicellulosiruptor lactoaceticus 6A] Length = 267 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 13/203 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+ Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDIPIVAVIE--PGAEAAVRATKNKRIGVIGTEGTIA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191 I S + + VEE G KE + KE F EKE Sbjct: 123 SGAFEKKILELDSSLQVFSKPCPLFVPLVEE---GWTDKEVTYLVAKEYLEEFNEKE--- 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 D +V+ CTHYP + V +++ P Sbjct: 177 IDTLVMGCTHYPFLQDVIKKVLP 199 >gi|325268397|ref|ZP_08135029.1| glutamate racemase [Prevotella multiformis DSM 16608] gi|324989251|gb|EGC21202.1| glutamate racemase [Prevotella multiformis DSM 16608] Length = 279 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 17/231 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG GGL +L +R L+PEY +IY+ D+ PYG+ + ++ +M LF Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPEYDYIYLGDNARAPYGSRSFDIVYQFTRQAVMKLFG-- 68 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 L ++ CNTA T+ +++L + P LG + P + T+S + + Sbjct: 69 ---LGCQLVILGCNTASAKALRTIQQNDLPALDPDRRVLGVIRPTAEIIGRLTRSRHVGL 125 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T T+R + I + V + +E + +KK I+ I Sbjct: 126 LATEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRID--HI 183 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + + D ++L CTHYP+++ + +P V + + +A R L R Sbjct: 184 MRIDPQIDSLILGCTHYPILMPKILKHAPHGVRIIPQGEYVAESLRDYLRR 234 >gi|282882426|ref|ZP_06291053.1| glutamate racemase [Peptoniphilus lacrimalis 315-B] gi|281297746|gb|EFA90215.1| glutamate racemase [Peptoniphilus lacrimalis 315-B] Length = 270 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 7/199 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI FDSG+GGL VL+ +P +IY D + PYG + +R + Sbjct: 5 SIGFFDSGVGGLSVLKVSLGEIPRESYIYYGDTLRMPYGVKSKEDI-ERYTCQAMEFFRS 63 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++VIACNTA + R F F PA+K++ ++S +++L+T T+ Sbjct: 64 KNVKMAVIACNTATCYGIKKARELFDFPIFGVVEPAVKESLHKSKSKKVALLATEGTVNS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTD 193 SY S +I + L +E DE+ + +++K E D Sbjct: 124 GVYDKFFESYSSNIYIKEIGCPDLVLAIENGDL-----RDEVIVPVINKYLDKFEDFEYD 178 Query: 194 VIVLACTHYPLIVHVFRQL 212 ++L CTH+P++ + F+++ Sbjct: 179 ALILGCTHFPIVENTFKRI 197 >gi|319900213|ref|YP_004159941.1| glutamate racemase [Bacteroides helcogenes P 36-108] gi|319415244|gb|ADV42355.1| glutamate racemase [Bacteroides helcogenes P 36-108] Length = 281 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 29/237 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P LG + P +++ T++ + +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQINDLPHLDPMRRVLGVIRPTVERIGDITKNRHVGVLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186 T++ SY + H + RV AC + ++ +E + + FI Sbjct: 131 GTIKS-------GSYPLEIH-----KLFPDIRVSGEACPMWVYLVENNEAQGDGTDYFIR 178 Query: 187 K-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 K + ++ D ++L CTHYPL++ R+ P + + + +A + L R Sbjct: 179 KYINSLLAKDRQVDTVILGCTHYPLLLPKIRRYMPEGITTVTQGELVAESLKDYLRR 235 >gi|296170277|ref|ZP_06851868.1| glutamate racemase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895000|gb|EFG74719.1| glutamate racemase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 271 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 13/236 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ + Sbjct: 10 IFDSGVGGLTVARAIIDQLPDEDIVYVGDTGHGPYGPLTIPEVRAHALAIGDDLVGRGVK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACNTA + R + +PA+++A A T++G I ++ T AT+ Sbjct: 70 AL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTQATI----N 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 S+ + V+++ V+ G+ ++ EG + + D +VL Sbjct: 125 SHAYQDAFAAARDTEVTAVACPRFVDFVERGVTSGR-QVLGLAEGYLEPLQRAQVDTLVL 183 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR--INTHQ----TRVFD 246 CTHYPL+ + + V + +++ A+ R L R + H+ TRVF+ Sbjct: 184 GCTHYPLLSGLIQLAMGEQVTLVSSAEETAKEVLRVLTERDLLRAHEAPPATRVFE 239 >gi|291571969|dbj|BAI94241.1| glutamate racemase [Arthrospira platensis NIES-39] Length = 285 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 21/218 (9%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLF 68 K I IFDSG+GGL VL+++ +P +Y AD PYG + + R + + Sbjct: 5 KRGQKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITW 64 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + D + ++ACNT+ L + +RS F + LG + P + AA +Q I +++ Sbjct: 65 AVAQDVK---MVLMACNTSSALALEVVRSEF-DIPILGLILPGAR--AAISQGERIGVIA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY----ACGIKIKEDEIKKEIEGC 183 TPAT I + V +E+ C ++ + + I+ Sbjct: 119 TPATAASNAYRQAIQEINPAVQVWQVGCPAFVPLIEQNRIHDPCTLEAAREYLTPLIQ-- 176 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 +R D ++ CTHYP + V R L P V +D Sbjct: 177 ------QRIDTLIYGCTHYPHLAPVLRSLLPAAVKLVD 208 >gi|194468341|ref|ZP_03074327.1| glutamate racemase [Lactobacillus reuteri 100-23] gi|194453194|gb|EDX42092.1| glutamate racemase [Lactobacillus reuteri 100-23] Length = 267 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 10/232 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V++ +R MP+ I+V D FPYG +++ + + +L++ Sbjct: 6 IGVMDSGLGGLSVIRVLREQMPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLLEQD 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ +IACNTA L++ P + +G + AA I ++ T +T++ Sbjct: 66 VKMM-IIACNTATAAALQLLQNELP-IPVIGVIEPGAMAATQHHYKKIGVIGTESTIKNG 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + ++ + + L S VE G + + E+E F + K + + Sbjct: 124 AYAKILAKLNPTLSVISSPAQPLVSIVEHGQTGTSEAQKAVDTELE-VF---DNKSIEAL 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 +L CTH+P + V +D + R+A+ LL T + ++ DD Sbjct: 180 ILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELL----TSENQLSDD 227 >gi|23099563|ref|NP_693029.1| glutamate racemase [Oceanobacillus iheyensis HTE831] gi|29839537|sp|Q8EPJ4|MURI_OCEIH RecName: Full=Glutamate racemase gi|22777793|dbj|BAC14064.1| glutamate racemase [Oceanobacillus iheyensis HTE831] Length = 274 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 15/253 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + SI + DSG+GGL V+ ++ +P+ IY+ D PYG +++ + + Sbjct: 1 MDKSIGVIDSGVGGLTVVHELMRQLPKEQLIYLGDTARCPYGPRSKEEVRQFTWEMVDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L K +L V+ACNTA +L+ + +G + P + A T + + ++ T Sbjct: 61 LTKNIKML-VVACNTATAFTLKDLKEQL-DIPVIGVIQPGARAAIKSTTNNQVGVIGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIEKEG 189 T+ S + S + ++ VE G+ + E K + E Sbjct: 119 TISSGAYSQALEKIKSDIQVSGLACPPFVPMVER---GV-LSGPEAKAVVSEALRPFSNN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247 K D ++L CTHYPL+ +++ V + +S+ AR LL + HQ D Sbjct: 175 KEMDTLILGCTHYPLLKSTIQEVMGEEVTVISSSEETARETSTLL---DVHQIMNRSDLV 231 Query: 248 --HALFLSGKPDI 258 H + +G +I Sbjct: 232 PLHQFYTTGDLEI 244 >gi|162453120|ref|YP_001615487.1| glutamate racemase [Sorangium cellulosum 'So ce 56'] gi|161163702|emb|CAN95007.1| glutamate racemase [Sorangium cellulosum 'So ce 56'] Length = 309 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 17/218 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V++ +R P +Y+ D PYG + + + ++ + Sbjct: 11 VFDSGLGGLTVVRALRRRCPAEDIVYLGDTARVPYGTRSPETVVRYALGCARVLIGRGVK 70 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 + V+ACNT + D LR + LG + P + A A ++ I +L T T+ Sbjct: 71 AI-VVACNTVSAVAIDMLRVEL-DLPVLGVILPGARAAVAASRGATIGVLGTAGTIASGA 128 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE---KEGKRTD 193 + S ++ + ++ +L S EE E E+ + + ++E G R+ Sbjct: 129 YPRAVASLSTRTEVAGQAAPLLVSLAEE-----GWLEGEVPRLVARRYLEPLIGAGARS- 182 Query: 194 VIVLACTHYPLIVHVFR----QLSPWPVDWLDNSDSIA 227 IVL CTH+PL+ L+ P+ +D++ + A Sbjct: 183 -IVLGCTHFPLLRAAIEAETASLAGGPLPIVDSASATA 219 >gi|331695366|ref|YP_004331605.1| glutamate racemase [Pseudonocardia dioxanivorans CB1190] gi|326950055|gb|AEA23752.1| Glutamate racemase [Pseudonocardia dioxanivorans CB1190] Length = 275 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 8/214 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +YV D PYG +++ + + +++++ Sbjct: 10 IGIFDSGVGGLTVARAVIDQLPAERIVYVGDTEHGPYGPLRIPEIRRHALAIGDELIERG 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +L VIACNTA + R +P +PA+++A A T++G I ++ T AT+ Sbjct: 70 VKLL-VIACNTASAACLADARERYPVPVVEVVLPAVRRAVAATRNGRIGVIGTSATI--- 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDV 194 TS S V+S+ V+ G+ + I ++E + R D Sbjct: 126 -TSGAYADAFSAARDVSVTSVACPRFVDFVERGVTSGRQILG--IAQSYLEPLQRARVDT 182 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V + ++D A+ Sbjct: 183 VVLGCTHYPLLSGLLQIVLGPEVTLVSSADETAK 216 >gi|307150996|ref|YP_003886380.1| glutamate racemase [Cyanothece sp. PCC 7822] gi|306981224|gb|ADN13105.1| glutamate racemase [Cyanothece sp. PCC 7822] Length = 278 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 15/222 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL--FSD 70 ++ I IFDSG+GGL VL+++ +P +Y AD PYG + + L F+ D Sbjct: 6 RSPIGIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGT---RSAGEILEFVREIMD 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTP 129 + Q + ++ACNT+ L D +R F + LG + + A A Q G I +++TP Sbjct: 63 WMTAQQVKMVIMACNTSSALALDAVRDEF-DVPVLGVI--LPGARAAVQKGKRIGVIATP 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT I V + V +E+ +I E + KE+ +++ Sbjct: 120 ATAASNAYRQAIEEIVPTAQVWQVGCPEFVPLIEQN----RIYEP-LTKEVAKQYLKPLL 174 Query: 190 K-RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + + D +V CTHY + +FRQ+ P V +D + + A Sbjct: 175 QLKIDTLVYGCTHYRHLEPLFRQILPSSVRLVDPARYVVSAA 216 >gi|254819168|ref|ZP_05224169.1| glutamate racemase [Mycobacterium intracellulare ATCC 13950] Length = 271 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 19/257 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P+ IYV D PYG ++ + + D++ + Sbjct: 10 VFDSGVGGLTVARAIIDQLPDEDIIYVGDTGHGPYGPLTIPDVRAHALAIGDDLVGRGVK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACNTA + R + +PA+++A A T++G I ++ T AT+ ++ Sbjct: 70 AL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTQATI-NSHA 127 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + I V+ VE + ++ EG + + D +VL Sbjct: 128 YQDAFAAARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVDTLVL 183 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA------RCLL-PRINTHQTRVFDDHAL 250 CTHYPL+ + + V + +++ A+ R LL P TRVF+ Sbjct: 184 GCTHYPLLSGLIQLAMGEHVTLVSSAEETAKEVLRVLTERDLLRPHDAPPATRVFE---- 239 Query: 251 FLSGKPDIAMRRLMQGF 267 +G PD A RL F Sbjct: 240 -ATGDPD-AFTRLAARF 254 >gi|297625966|ref|YP_003687729.1| glutamate racemase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921731|emb|CBL56289.1| Glutamate racemase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 272 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 108/249 (43%), Gaps = 10/249 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + + I IFDSG GGL V + + L+P IY+ D PYG +++ ++ Sbjct: 3 RDVNAPIGIFDSGFGGLTVARAVVDLLPREDIIYLGDTARAPYGPRPIAEVREFVLQALD 62 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++ + L VIACNT + + R + +PA ++AA T++G + ++ T Sbjct: 63 SLVARGVKSL-VIACNTGSSAALHDARERYDLPITEVVLPAARKAARITRNGRVGVICTR 121 Query: 130 AT-LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T + R+Y L S V + + + VE GI + ++ E + Sbjct: 122 GTAISRSYNDALAASPVK------LFTQVCPRFVEFVEAGITTGPEVLQLARE-YLAPLQ 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-D 247 D ++L CTHYPL+ V + V + +SD AR L R + +T + Sbjct: 175 ADDIDTLILGCTHYPLLSGVISYVMGEDVTLVSSSDECARAVFAELTRDDLLRTEPHEPQ 234 Query: 248 HALFLSGKP 256 F +G P Sbjct: 235 REFFTTGDP 243 >gi|298374652|ref|ZP_06984610.1| glutamate racemase [Bacteroides sp. 3_1_19] gi|298269020|gb|EFI10675.1| glutamate racemase [Bacteroides sp. 3_1_19] Length = 276 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 33/239 (13%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + F +L + Sbjct: 9 IGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGT---RSFEVVYQFTRQAVLRLF 65 Query: 76 QP--VLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + L ++ACNTA T+ + +L + P+ LG + P ++ +++ I I+ Sbjct: 66 ESGCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVG 125 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCF 184 T T+ TSN + + + H+ +V AC + ++ +E F Sbjct: 126 TSGTI----TSNSYTIEIGRMYPHI--------QVTGEACPMWVPLVENNEFNSPGADYF 173 Query: 185 IEKE-------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++K + D ++L CTHYPL++ R P + + +A R L R Sbjct: 174 VKKHIDHILSVDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGR 232 >gi|118619134|ref|YP_907466.1| glutamate racemase [Mycobacterium ulcerans Agy99] gi|183984029|ref|YP_001852320.1| glutamate racemase MurI [Mycobacterium marinum M] gi|166231044|sp|A0PUH6|MURI_MYCUA RecName: Full=Glutamate racemase gi|229486244|sp|B2HQH3|MURI_MYCMM RecName: Full=Glutamate racemase gi|118571244|gb|ABL05995.1| glutamate racemase MurI [Mycobacterium ulcerans Agy99] gi|183177355|gb|ACC42465.1| glutamate racemase MurI [Mycobacterium marinum M] Length = 271 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 6/188 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ + Sbjct: 10 IFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEVRAHALAIGDDLVGRGVK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACNTA + R + +PA+++A A T++G I ++ T R T T Sbjct: 70 AL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGT----RATIT 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 S+ + ++++ V+ G+ ++ EG + D +VL Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVERGVTSGR-QVLGLAEGYLEPLQRSGVDTLVL 183 Query: 198 ACTHYPLI 205 CTHYPL+ Sbjct: 184 GCTHYPLL 191 >gi|229159921|ref|ZP_04287928.1| Glutamate racemase [Bacillus cereus R309803] gi|228623660|gb|EEK80479.1| Glutamate racemase [Bacillus cereus R309803] Length = 276 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 54/244 (22%), Positives = 106/244 (43%), Gaps = 8/244 (3%) Query: 13 QNSIL-IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +NS++ + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + Sbjct: 6 ENSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FIFEMVEF 64 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L ++ V+ACNT +L+ S+ +G + P + A T+ G I ++ T Sbjct: 65 LKQFPLKALVVACNTGAAAALTDLQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVG 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ +H + +H + LA+ VE I ++K+ + + Sbjct: 124 TIKSNMYEKALHELDTYLEVHSHACPTLATVVENQLEDIAYVTQQVKQ----ALLPLTKE 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D ++L CTHYPL+ ++ V + +++ A +L ++ H Sbjct: 180 DIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDKLNPKHRF 239 Query: 251 FLSG 254 F +G Sbjct: 240 FTTG 243 >gi|229918347|ref|YP_002886993.1| glutamate racemase [Exiguobacterium sp. AT1b] gi|229469776|gb|ACQ71548.1| glutamate racemase [Exiguobacterium sp. AT1b] Length = 272 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 49/225 (21%), Positives = 101/225 (44%), Gaps = 7/225 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 +++ +I + DSG+GGL V++++ +P+ +Y+ D PYG ++ L Sbjct: 5 QMKRAIGVLDSGVGGLTVVKELMRQLPKEEIVYIGDTERCPYGPRPHDEIEAYTWELIEF 64 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +L K ++ VIACNTA ++ E R + +G + P + A T++ I ++ T Sbjct: 65 LLKKDVKMI-VIACNTATAVVLKEARKRL-DIPVIGVIDPGARAAVKGTRNKHIGVIGTK 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ + + ++ ++ VE ++ + +++ +E + Sbjct: 123 MTIESGSYEKALRHVAGEVDVYSLACPPFVPLVEAG----EVSGERVRQVVEETLRPLQP 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYPL+ V + + V + + D A +L Sbjct: 179 SEMDTLILGCTHYPLLAPVIQDVVGPDVHLISSGDETALEVAAML 223 >gi|126656938|ref|ZP_01728116.1| glutamate racemase [Cyanothece sp. CCY0110] gi|126621776|gb|EAZ92485.1| glutamate racemase [Cyanothece sp. CCY0110] Length = 281 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 10/224 (4%) Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +++QNS I +FDSG+GGL VL+++ +P+ +Y AD PYGN E + + + + Sbjct: 2 REIQNSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGNREASEILQFVREIL 61 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + + + ++ ++ACNT+ L + +R F + LG + P K AA Q I ++S Sbjct: 62 AWMTGQNVKMV-IMACNTSSALALEAVRQEF-DLPILGVILPGAK--AAVKQGKRIGVIS 117 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TPAT + I + + V +E+ +I + K+ + Sbjct: 118 TPATAKSQAYRQAIQEINPEAQVWQVGCPQFVPLIEQN----RIWDVYTKQVAQEYLSPL 173 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 D +V CTHY + + + + P + +D + + + A+ Sbjct: 174 LAHDIDTLVYGCTHYRHLEALIKTIIPGTIKLIDPASYVVQAAK 217 >gi|281421511|ref|ZP_06252510.1| glutamate racemase [Prevotella copri DSM 18205] gi|281404583|gb|EFB35263.1| glutamate racemase [Prevotella copri DSM 18205] Length = 278 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 17/201 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG GGL +L +R MP+Y ++Y+ D+ PYG+ + ++ ++ LFS Sbjct: 10 IGVFDSGYGGLTILHGLRQTMPQYDYMYLGDNARAPYGSRSFEVVYKFTRQAVLKLFSMG 69 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 L ++ CNTA +L + ++ PS LG + P + T+S + + Sbjct: 70 CH-----LVILGCNTASAKALRSLQQRDIPELDPSRRVLGIIRPTAEVIGTITKSNHVGL 124 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T T++ + I + + V+ + A+ VE + +KK I+ + Sbjct: 125 LATEGTIKSQSYNMEISKLWPEIQVSGVACPLWAAIVEANEADSPGADYFVKKRIDQLML 184 Query: 186 EKEGKRTDVIVLACTHYPLIV 206 + D I+L CTHYPL++ Sbjct: 185 KD--ADIDTIILGCTHYPLLM 203 >gi|167765980|ref|ZP_02438033.1| hypothetical protein CLOSS21_00471 [Clostridium sp. SS2/1] gi|317497209|ref|ZP_07955533.1| Asp/Glu/Hydantoin racemase [Lachnospiraceae bacterium 5_1_63FAA] gi|167712337|gb|EDS22916.1| hypothetical protein CLOSS21_00471 [Clostridium sp. SS2/1] gi|291558774|emb|CBL37574.1| glutamate racemase [butyrate-producing bacterium SSC/2] gi|316895454|gb|EFV17612.1| Asp/Glu/Hydantoin racemase [Lachnospiraceae bacterium 5_1_63FAA] Length = 267 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 11/224 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V +++ +PE IY D PYG + + + + +L K Sbjct: 5 IGVFDSGVGGLTVAREIMRQLPEESMIYFGDTARVPYGTKSKDTIVRYSRQIVNFLLSKG 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA L +L+ + ++ +G V P A T++ I I+ T AT++ Sbjct: 65 VKAV-VIACNTASALALADLQELY-NVPIIGMVQPGAIAAMNATKNKNIGIIGTNATIKS 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + + + VEE +I ED + + + +E K+ D+ Sbjct: 123 GQYGQYLRKLDPSVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYL------REFKQYDI 176 Query: 195 --IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++L CTHYPL+++ ++ V ++ + +A+ + +L + Sbjct: 177 DSLILGCTHYPLLINPIQRFVGDKVTLVNPAYEVAKTLKQMLAQ 220 >gi|308174536|ref|YP_003921241.1| glutamate racemase [Bacillus amyloliquefaciens DSM 7] gi|307607400|emb|CBI43771.1| glutamate racemase [Bacillus amyloliquefaciens DSM 7] Length = 272 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 11/248 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + + Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 61 Query: 72 LDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L+ + + VIACNTA + ++D R T + +G + P + A T++ I ++ T Sbjct: 62 LENHHIKMLVIACNTATAIALEDIQRKT--DIPVVGVIQPGARTAIKVTKNQHIGVIGTI 119 Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ R Y L+ + + ++ +L VE + ++ + +E + Sbjct: 120 NTIKSRAYEQALL-GLNADLQVENMACPLLVPFVESG----RFLQESAAEAVEASLEPLK 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDD 247 G D ++L CTHYP++ + V + + D AR +L +Q++ + Sbjct: 175 GTAIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPE 234 Query: 248 HALFLSGK 255 H +G+ Sbjct: 235 HQFLTTGE 242 >gi|261380865|ref|ZP_05985438.1| glutamate racemase [Neisseria subflava NJ9703] gi|319638648|ref|ZP_07993408.1| glutamate racemase [Neisseria mucosa C102] gi|284796337|gb|EFC51684.1| glutamate racemase [Neisseria subflava NJ9703] gi|317400032|gb|EFV80693.1| glutamate racemase [Neisseria mucosa C102] Length = 269 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + L VIACNT + ++R +M L + A +AA T++ I I++T T Sbjct: 66 ENDVKAL-VIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALQTTKNNRIGIIATNTT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IHS + + ++ +L VEE ++ +++ ++ + Sbjct: 125 VNSNAYARAIHSQNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLADD---- 180 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 181 IDTLVLGCTHFPLL 194 >gi|241889903|ref|ZP_04777201.1| glutamate racemase [Gemella haemolysans ATCC 10379] gi|241863525|gb|EER67909.1| glutamate racemase [Gemella haemolysans ATCC 10379] Length = 264 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 27/258 (10%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + N+I +FDSG+GGL V +++ +P Y D PYG+ + K + Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTKEEIIKNTDRAVKFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +DK L V+ACNTA D L++ + + +G V P ++A T++ + +L T Sbjct: 61 IDKGVK-LVVLACNTATAAALDYLQNKY-EVPIIGVVQPGARRAIQATENNKVLVLGTK- 117 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KEDEIKKEIEGCFIE 186 +T+N S V I ++S I+ V + AC + E + KE I Sbjct: 118 -----FTAN---SKVYDIEIENINSDII---VFDKACPAFVPFIESEGNLDKEATKNLIS 166 Query: 187 KEGKRT-----DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 T D +VL CTHYP++ + + + + AR +L HQ Sbjct: 167 DTLGNTNTLGVDTVVLGCTHYPILKKDIEEYYGNNIKVISSGREAAREVSTVLGYTKLHQ 226 Query: 242 TRVFD--DHALFLSGKPD 257 + F+ +H F+S K D Sbjct: 227 KK-FNKKEHRFFISQKSD 243 >gi|325104671|ref|YP_004274325.1| glutamate racemase [Pedobacter saltans DSM 12145] gi|324973519|gb|ADY52503.1| glutamate racemase [Pedobacter saltans DSM 12145] Length = 270 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 9/218 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSGIGGL V +R ++P+ IY D PYG+ A++ + + + Sbjct: 4 EQPIGIFDSGIGGLTVANAIRKVLPKEKIIYFGDTGHMPYGDKSPDAIRYYSLKIGKFLE 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +K V+ VIACNTA +L D+L + L + P + Q I ++ T A Sbjct: 64 EKGCKVI-VIACNTASSLAYDDLVQFMGDRIPILNVIDPVVHYVTDDMQYQKIGVIGTKA 122 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-IEGCFIEKEG 189 T+ + + ++ +++ +LA +EE E+ I IE + Sbjct: 123 TISSDVYARKLKERNLGLQVNSLATPLLAPMIEE-----GFFENNISHTVIESYLSSPQL 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + D ++LACTHYPLI VD L+ + +A Sbjct: 178 QNIDALILACTHYPLIKREIESFFNNQVDILNTASIVA 215 >gi|312621720|ref|YP_004023333.1| glutamate racemase [Caldicellulosiruptor kronotskyensis 2002] gi|312202187|gb|ADQ45514.1| glutamate racemase [Caldicellulosiruptor kronotskyensis 2002] Length = 267 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 13/203 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+ Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDVPIVAVIE--PGAEAAVKATKNKRIGVIGTEGTIS 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191 I + + + VEE G KE I KE F E K Sbjct: 123 SGAFEKKILELDNSIKVFSKPCPLFVPLVEE---GWTDKEVTYLIAKEYLEEFNE---KA 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 D +VL CTHYP + V R++ P Sbjct: 177 IDTLVLGCTHYPFLQDVIRKVLP 199 >gi|269216891|ref|ZP_06160745.1| glutamate racemase [Slackia exigua ATCC 700122] gi|269129698|gb|EEZ60782.1| glutamate racemase [Slackia exigua ATCC 700122] Length = 430 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 30/250 (12%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 + DN P I +FDSG GGL V +++ LMP +Y D PYG + H + Sbjct: 143 EFDNAP--------IGVFDSGYGGLTVAREIAALMPHESIVYFGDTARCPYGPRDPHEVA 194 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 + + + + + +L VIACNTA + + TF S+ GAV P + AA T + Sbjct: 195 EFVQQIGRWLTARNVKML-VIACNTATAAGLERAQQTF-SVPVRGAVEPGARAAARATHN 252 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK--- 177 G + ++ T T+ I + + + +++ VE GI++ + I+ Sbjct: 253 GRVGVIGTKGTIESDCYPRAIRAIDAGLTVFSIATPRFVEIVEN---GIRLSKGPIEDLT 309 Query: 178 ------------KEIEGCFIEKEGK-RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224 + I ++E + D +VLACTHYPL+ + + V + +S+ Sbjct: 310 SMASKAYIRPSFQAIAREYLEPLRRCHVDALVLACTHYPLLKALIGGVMGHKVLLVSSSE 369 Query: 225 SIARRARCLL 234 ++A R L Sbjct: 370 ALAHDVRATL 379 >gi|324997298|ref|ZP_08118410.1| glutamate racemase [Pseudonocardia sp. P1] Length = 283 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 21/267 (7%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E+ + I IFDSG+GGL V + + L+P +YV D PYG +++ + + Sbjct: 4 ERGIDAPIGIFDSGVGGLTVARSVIDLLPAEQIVYVGDTAHSPYGPRTIADIRRLALQIG 63 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 ++++ L VIACN+A + R +P PA+++A A T++G I ++ T Sbjct: 64 DELVESGVKAL-VIACNSASAACLADFRERYPVPVVEVVRPAVRRAVAATRNGRIGVIGT 122 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ ++ + I V+ VE + ++ EG + Sbjct: 123 QATIASGAYADAFDA-ARDTEITSVACPRFVDFVERGTTSGR----QVLGVAEGYLEPLQ 177 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246 D +VL CTHYPL+ V + V + ++D AR + T TR + D Sbjct: 178 RAGVDTVVLGCTHYPLLTGVLEIVLGPDVTLVSSADETARTL------VRTLHTRDLLRD 231 Query: 247 D------HALFLSGKPDIAMRRLMQGF 267 D H +G P+ RRL + F Sbjct: 232 DTAPAAAHRFLATGDPE-PFRRLGRRF 257 >gi|158429235|pdb|2OHO|A Chain A, Structural Basis For Glutamate Racemase Inhibitor gi|158429236|pdb|2OHO|B Chain B, Structural Basis For Glutamate Racemase Inhibitor Length = 273 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 28/252 (11%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + + Sbjct: 18 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 77 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E+++ + LG V P A T G + ++ TP T Sbjct: 78 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 129 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190 + S + + I L++ I +V AC + I E I K+I + Sbjct: 130 ---VASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVG 183 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246 + D +VL CTHYPL+ + + + V +D+ R LL N HQ V Sbjct: 184 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 241 Query: 247 DHALFLSGKPDI 258 +H F + P+I Sbjct: 242 EHRFFTTANPEI 253 >gi|146296395|ref|YP_001180166.1| glutamate racemase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409971|gb|ABP66975.1| glutamate racemase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 267 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 18/233 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM----FLFSDI 71 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M FL S Sbjct: 6 IGIFDSGLGGLTVFKEIVNLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + + V+ACNTA + L+ F P +A + P + AA T++ + ++ T Sbjct: 66 IK-----IVVVACNTASAYAYEFLKGQFDIPIIAVIE--PGARAAALATKNKKVGVIGTE 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ I + + + VEE ++ K+ +E E + Sbjct: 119 GTIASGSFEKKILEFDPDIKVFSKPCPLFVPLVEEGWIDKEVTYLVAKEYLE----EFKE 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 K D +VL CTHYP + +V +++ P V ++ + A++ +L + N T Sbjct: 175 KGIDTLVLGCTHYPFLQNVIKKILP-EVTLINPALETAKQTYEVLKQNNMLNT 226 >gi|225023363|ref|ZP_03712555.1| hypothetical protein EIKCOROL_00221 [Eikenella corrodens ATCC 23834] gi|224943841|gb|EEG25050.1| hypothetical protein EIKCOROL_00221 [Eikenella corrodens ATCC 23834] Length = 271 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 6/203 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL V++ + +P + +Y D PYG ++ + + L Sbjct: 8 QRPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRSTIETYTAQIV-EFL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPAT 131 ++ VIACNT + ++R T M L + A QAA T ++G I I++T T Sbjct: 67 MQHDVKALVIACNTIAAVAGAKVRQTAGGMPVLDVIAAGAQAALATSRNGRIGIIATSTT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH+ Q + + +L VEE ++ +++ ++ E Sbjct: 127 VNSNAYARAIHAQNPQARVPSQACPLLVPLVEEGWLEHEVTRLTVREYLKPLLAED---- 182 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 D +VL CTHYPL+ + + +P Sbjct: 183 IDTLVLGCTHYPLLKPLLQSEAP 205 >gi|15674511|ref|NP_268685.1| glutamate racemase [Streptococcus pyogenes M1 GAS] gi|71910117|ref|YP_281667.1| glutamate racemase [Streptococcus pyogenes MGAS5005] gi|20177988|sp|Q9A1B7|MURI_STRP1 RecName: Full=Glutamate racemase gi|158429234|pdb|2OHG|A Chain A, Structural Basis For Glutamte Racemase Inhibition gi|158429237|pdb|2OHV|A Chain A, Structural Basis For Glutamate Racemase Inhibition gi|13621614|gb|AAK33406.1| putative glutamate racemase [Streptococcus pyogenes M1 GAS] gi|71852899|gb|AAZ50922.1| glutamate racemase [Streptococcus pyogenes MGAS5005] Length = 264 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 28/252 (11%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + + Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E+++ + LG V P A T G + ++ TP T Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190 + S + + I L++ I +V AC + I E I K+I + Sbjct: 121 ---VASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVG 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246 + D +VL CTHYPL+ + + + V +D+ R LL N HQ V Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232 Query: 247 DHALFLSGKPDI 258 +H F + P+I Sbjct: 233 EHRFFTTANPEI 244 >gi|229087049|ref|ZP_04219201.1| Glutamate racemase [Bacillus cereus Rock3-44] gi|228696242|gb|EEL49075.1| Glutamate racemase [Bacillus cereus Rock3-44] Length = 265 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 57/261 (21%), Positives = 117/261 (44%), Gaps = 12/261 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + ++ Sbjct: 2 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQ-FTWEMTEH 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 61 LLALDIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S ++ + ++ VE + + +++ ++ + Sbjct: 120 TVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESAMAYEVVRETLQPL----KTT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDD 247 D ++L CTHYP++ V +++ V + + D AR +L +N + + D Sbjct: 176 EIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ--SD 233 Query: 248 HALFLSGKPDIAMRRLMQGFG 268 H +GK D+ + FG Sbjct: 234 HLFLTTGKIDLFKEIASKWFG 254 >gi|224536359|ref|ZP_03676898.1| hypothetical protein BACCELL_01233 [Bacteroides cellulosilyticus DSM 14838] gi|224522019|gb|EEF91124.1| hypothetical protein BACCELL_01233 [Bacteroides cellulosilyticus DSM 14838] Length = 279 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILSKIREALPQYDYIYLGDNARSPYGTRSFEIVYEFTLQAVTRLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P+ LG + P ++ T S + IL+T Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPEMDPARRVLGVIRPTVECIGNITHSRHVGILATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ IH + + + S VE + ++K I + E Sbjct: 131 GTIKSESYPLEIHKLFPDIQVEGEACPLWVSLVENNEAEGDGTDYFVRKYINELLSKDE- 189 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + D ++L CTHYP+++ + P + + + +A + L R Sbjct: 190 -QIDTVILGCTHYPILLPKIEKYMPKGITTVAQGELVATSLKDYLQR 235 >gi|307564832|ref|ZP_07627360.1| glutamate racemase [Prevotella amnii CRIS 21A-A] gi|307346554|gb|EFN91863.1| glutamate racemase [Prevotella amnii CRIS 21A-A] Length = 278 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG GGL +L ++ L+PEY +IY+ D+ PYG+ + ++ ++ LF Sbjct: 10 IGVFDSGYGGLTILHAIQKLLPEYDYIYLGDNARAPYGSRSFDVVYEFTRQAVLKLFD-- 67 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 L ++ CNTA T+ +++L P LG + P + T S I I Sbjct: 68 ---MGCSLVILGCNTASAKALRTIQRNDLPVIAPDNRVLGVIRPTAEVVGLLTHSNHIGI 124 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T T+R + I + + ++ + +E + +KK IE I Sbjct: 125 LATEGTVRSKSYNIEIQKLWPKISVTGIACPLWVPIIENNEADSPGADYFVKKRIE--HI 182 Query: 186 EKEGKRTDVIVLACTHYPLIV 206 + + D I+L CTHYP+++ Sbjct: 183 MRLDPQIDTIILGCTHYPILM 203 >gi|294674929|ref|YP_003575545.1| glutamate racemase [Prevotella ruminicola 23] gi|294473325|gb|ADE82714.1| glutamate racemase [Prevotella ruminicola 23] Length = 277 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 13/231 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + F ++ Sbjct: 7 GPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYG---PRSFDVVYEFTRQAVVK 63 Query: 74 KYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 ++ L ++ CNTA T+ +++L P LG + P + T S + + Sbjct: 64 LFEMGCHLVILGCNTASAKALRTIQQNDLPKIDPERRVLGIIRPTAEVIGDLTTSKHVGV 123 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T T++ IH + V+ VE + +KK I+ I Sbjct: 124 LATEGTIKSESYDLEIHKLFPDIKVSGVACPFWVPLVEYNEADSPGADYFVKKRIDE--I 181 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++ D I+L CTHYPL++ + P V + + +A + L R Sbjct: 182 MRKDPDIDTIILGCTHYPLLMPKILKYLPAGVRVVPQGEYVAESLKQYLER 232 >gi|189464295|ref|ZP_03013080.1| hypothetical protein BACINT_00636 [Bacteroides intestinalis DSM 17393] gi|189438085|gb|EDV07070.1| hypothetical protein BACINT_00636 [Bacteroides intestinalis DSM 17393] Length = 279 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 9/222 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + Sbjct: 8 IPGPIGVFDSGYGGLTILSKIREALPQYDYIYLGDNARTPYGTRSFEIVYEFTLQAVTKL 67 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 + L ++ACNTA ++ ++L P+ LG + P ++ + TQS + + Sbjct: 68 FE-MGCHLVILACNTASAKALRSIQINDLPGMDPARRVLGVIRPTVECIGSITQSRHVGV 126 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T T++ IH + + + S VE + ++K I Sbjct: 127 LATAGTIKSESYPLEIHKLFPDIQVAGEACPLWVSLVENNEAEGDGTDYFVRKYINELLA 186 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + + D ++L CTHYPL++ ++ P + + + +A Sbjct: 187 KD--AQIDTVILGCTHYPLLLPKIKKHMPDGITTVAQGELVA 226 >gi|218264477|ref|ZP_03478310.1| hypothetical protein PRABACTJOHN_04010 [Parabacteroides johnsonii DSM 18315] gi|218221970|gb|EEC94620.1| hypothetical protein PRABACTJOHN_04010 [Parabacteroides johnsonii DSM 18315] Length = 278 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 17/222 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I IFDSG GGL + K+R MP Y +IY+ D+ PYG + ++ + LF++ Sbjct: 9 IGIFDSGYGGLTIFDKIREAMPGYDYIYLGDNARSPYGTRSFEVVYRFTRQAVETLFNEG 68 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 L ++ACNTA T+ + +L P+ LG + P ++ ++S + I Sbjct: 69 CQ-----LVILACNTASAKALRTIQQRDLPQWDPARRVLGVIRPTVELMDKISKSKHVGI 123 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L T T+ S I + + + VE G + ++K +E I Sbjct: 124 LGTTGTITSGSYSLEIKKMFPHMTVTGEACPMWVPLVENNEFGSPGADYFVRKHLE--HI 181 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + D +VL CTHYPL++ + P + + +A Sbjct: 182 LATDPKIDTLVLGCTHYPLLIEKIKAFLPAGITLFSQGEYVA 223 >gi|225076304|ref|ZP_03719503.1| hypothetical protein NEIFLAOT_01345 [Neisseria flavescens NRL30031/H210] gi|224952428|gb|EEG33637.1| hypothetical protein NEIFLAOT_01345 [Neisseria flavescens NRL30031/H210] Length = 269 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + L VIACNT + +R +M L + A +AA T++ I I++T T Sbjct: 66 ENDVKAL-VIACNTIAAVAGQRIRQKAGNMPVLDVISAGAEAALQTTKNNRIGIIATNTT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IHS + + ++ +L VEE ++ +++ ++ + Sbjct: 125 VNSNAYARAIHSKNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLADD---- 180 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 181 IDTLVLGCTHFPLL 194 >gi|320547382|ref|ZP_08041671.1| glutamate racemase [Streptococcus equinus ATCC 9812] gi|320447978|gb|EFW88732.1| glutamate racemase [Streptococcus equinus ATCC 9812] Length = 269 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 18/255 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+ ++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVHELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K ++ V ACNTA + E++ + LG + P A T++G Sbjct: 53 YTWELVNFLLTKNVKMI-VFACNTATAVAWKEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I S + + ++ VE ++ KK + Sbjct: 111 KIGVIGTPMTINSEVYPEKIKSLSPKMEVSGLACPKFVPIVESN----EMTSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 ESLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPDVKLIDSGAECIRDVSVLLNYFEINH 225 Query: 240 HQTRVFDDHALFLSG 254 ++T +H + + Sbjct: 226 NRTEDVTNHHFYTTA 240 >gi|228993222|ref|ZP_04153143.1| Glutamate racemase [Bacillus pseudomycoides DSM 12442] gi|228999271|ref|ZP_04158851.1| Glutamate racemase [Bacillus mycoides Rock3-17] gi|228760468|gb|EEM09434.1| Glutamate racemase [Bacillus mycoides Rock3-17] gi|228766548|gb|EEM15190.1| Glutamate racemase [Bacillus pseudomycoides DSM 12442] Length = 271 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 14/262 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + ++ Sbjct: 8 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQ-FTWEMTEY 66 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + VIACNTA ++ +E++ + +G + P + A T + + I+ T Sbjct: 67 LLALDIKMLVIACNTATAVVLEEMQKQL-KIPVVGVIHPGSRTALKVTNTYHVGIIGTIG 125 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189 T++ + + S ++ +V S+ VE G E E+ E+ ++ + Sbjct: 126 TVKSGAYEDALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLKN 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFD 246 D ++L CTHYP++ V +++ V + + D AR +L +N + + Sbjct: 181 TEIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ--S 238 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 DH +GK D+ + FG Sbjct: 239 DHLFLTTGKIDLFKEIASKWFG 260 >gi|229006826|ref|ZP_04164459.1| Glutamate racemase [Bacillus mycoides Rock1-4] gi|228754448|gb|EEM03860.1| Glutamate racemase [Bacillus mycoides Rock1-4] Length = 265 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/261 (21%), Positives = 118/261 (45%), Gaps = 12/261 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + ++ Sbjct: 2 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQ-FTWEMTEY 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + VIACNTA ++ +E++ + +G + P + A T + + I+ T Sbjct: 61 LLALDIKMLVIACNTATAVVLEEMQKQL-KIPVVGVIHPGSRTALKVTNTYHVGIIGTIG 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 TVKSGAYEDALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL----KNT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDD 247 D ++L CTHYP++ V +++ V + + D AR +L +N + + D Sbjct: 176 EIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ--SD 233 Query: 248 HALFLSGKPDIAMRRLMQGFG 268 H +GK D+ + FG Sbjct: 234 HLFLTTGKIDLFKEIASKWFG 254 >gi|329956144|ref|ZP_08296867.1| glutamate racemase [Bacteroides clarus YIT 12056] gi|328524730|gb|EGF51788.1| glutamate racemase [Bacteroides clarus YIT 12056] Length = 279 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 12/215 (5%) Query: 9 EKKLQNS---ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 ++KL +S I +FDSG GGL +L K+R +PEY ++Y+ D+ PYG + + + Sbjct: 2 KQKLPSSPGPIGVFDSGYGGLTILSKIREALPEYDYVYLGDNARAPYGTRSFEVVYEFTL 61 Query: 66 FLFSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + + L ++ACNTA ++ ++L P+ LG + P ++ T+ Sbjct: 62 QAVTKLFE-MGCHLVILACNTASAKALRSIQINDLPHLDPARRVLGVIRPTVECIGNITR 120 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 S + +L+T T++ IH + + + S VE + I+K Sbjct: 121 SRHVGVLATGGTIKSESYPLEIHKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFIRKY 180 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 I + + D +L CTHYP+++ RQ P Sbjct: 181 INELLAKD--REIDTAILGCTHYPILLPKIRQYMP 213 >gi|331092253|ref|ZP_08341081.1| glutamate racemase [Lachnospiraceae bacterium 2_1_46FAA] gi|330401685|gb|EGG81264.1| glutamate racemase [Lachnospiraceae bacterium 2_1_46FAA] Length = 276 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 15/195 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG+GGL V++++ +P + +Y D PYG+ + K+ + FL + Sbjct: 11 IGVFDSGVGGLTVVKEIMQNLPNENLVYFGDTARVPYGSKSVDTIIRFSKQIVRFLQT-- 68 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 K + + VIACNT L D LR + +G V P K AA T++ + I+ T A Sbjct: 69 -KKVKAI--VIACNTVSALALDILRQE-TDIPIIGVVKPGSKVAAEVTENKRVGIIGTEA 124 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I Y + + + VEE +I + I + E + Sbjct: 125 TVKSGVYTKFIQQYKPDIEVLAKACPLFVPLVEEGFVDNRIAREAIDYYLH----EMKQS 180 Query: 191 RTDVIVLACTHYPLI 205 D ++L CTHYPL+ Sbjct: 181 GIDTLILGCTHYPLL 195 >gi|332881250|ref|ZP_08448900.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680626|gb|EGJ53573.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 281 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 28/237 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L ++R LMP+Y ++Y+ D+ PYG + + + D Sbjct: 12 IGVFDSGYGGLTILHEIRQLMPQYDYLYLGDNARTPYGTRSFEVVYEFTREAVQKLFD-L 70 Query: 76 QPVLSVIACNTA------------FTLIKDELRSTF----PSMAFLGAVPAIKQAAAYTQ 119 L ++ACNTA ++ E R P+ +G + + Sbjct: 71 GCHLVILACNTASAKALKTIQQNDLPQMEGETRRVLGVIRPTAECIGQITHSRHVGILAT 130 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 SG IS S P +R+ Y ++ + LV + S +Y ++K Sbjct: 131 SGTISSGSYPLEIRKLYPDIVVSGEACPMWVPLVENYEYDSPGADYF---------VEKR 181 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 I G + K+ D I+L CTHYPL+++ + +P V + + +A + L R Sbjct: 182 I-GNLLRKD-PAIDTIILGCTHYPLLLNKILKYTPRNVRIVPQGEYVAYSLKDYLQR 236 >gi|328554458|gb|AEB24950.1| glutamate racemase [Bacillus amyloliquefaciens TA208] Length = 271 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 11/248 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 60 Query: 72 LDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L+ + + VIACNTA + ++D R T + +G + P + A T++ I ++ T Sbjct: 61 LENHHIKMLVIACNTATAIALEDIQRKT--DIPVVGVIQPGARTAIKVTKNQHIGVIGTI 118 Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ R Y L+ + + + +L VE + ++ + +E + Sbjct: 119 NTIKSRAYEQALL-GLNADLQVENTACPLLVPFVESG----RFLQESAAEAVEASLEPLK 173 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDD 247 G D ++L CTHYP++ + V + + D AR +L +Q++ + Sbjct: 174 GTAIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPE 233 Query: 248 HALFLSGK 255 H +G+ Sbjct: 234 HQFLTTGE 241 >gi|327312842|ref|YP_004328279.1| glutamate racemase [Prevotella denticola F0289] gi|326944421|gb|AEA20306.1| glutamate racemase [Prevotella denticola F0289] Length = 279 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 17/233 (7%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFS 69 I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + ++ +M LF Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGSRSFDIVYQFTRQAVMKLFG 68 Query: 70 DILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123 L ++ CNTA T+ +++L + P LG + P + T+S + Sbjct: 69 -----LGCQLVILGCNTASAKALRTIQQNDLPALDPDRRVLGVIRPTAEIIGRLTRSRHV 123 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T+R + I + V + +E + +KK I+ Sbjct: 124 GLLATEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRID-- 181 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 I + + D ++L CTHYP+++ + P V + + +A R L R Sbjct: 182 HIMRIDPQIDCLILGCTHYPILMPKILKHVPCGVRIIPQGEYVAESLRDYLRR 234 >gi|328912861|gb|AEB64457.1| Glutamate racemase [Bacillus amyloliquefaciens LL3] Length = 271 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/248 (22%), Positives = 114/248 (45%), Gaps = 11/248 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 60 Query: 72 LDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L+ + + VIACNTA + ++D R T + +G + P + A T++ I ++ T Sbjct: 61 LENHHIKMLVIACNTATAIALEDIQRKT--DIPVVGVIQPGARTAIKVTKNQHIGVIGTI 118 Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ R Y L+ + + ++ +L VE + ++ + +E + Sbjct: 119 NTIKSRAYEQALL-GLNADLQVENMACPLLVPFVESG----RFLQESAAEAVEASLEPLK 173 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDD 247 G D ++L CTHYP++ + V + + D AR +L +Q++ + Sbjct: 174 GTAIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPE 233 Query: 248 HALFLSGK 255 H +G+ Sbjct: 234 HQFLTTGE 241 >gi|327439324|dbj|BAK15689.1| glutamate racemase [Solibacillus silvestris StLB046] Length = 266 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 16/263 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V + + L+P Y+ D PYG + + + + Sbjct: 1 MNAPIGVIDSGVGGLTVAKAIMELLPNETIYYIGDTARCPYGPRTKQEV-RNFTWEMAKA 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPA 130 L+K + VIACNTA + + L+ P LG + A +AA T+ + +L+T Sbjct: 60 LEKMNVKMLVIACNTATAVALESLQKHMP-FPVLGVINAGARAAIKKTKRNEVVVLATEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S ++ I ++ VE + D + K ++ E + Sbjct: 119 TIKSGAYEEAVKSLSTKAKIIPLACPTFVPLVESGEYEGQFSYDLVAKGLKPL----EDE 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--- 247 R D ++L CTHYP++ V L +++ A+ +L T Q R ++ Sbjct: 175 RFDTVILGCTHYPILQKQIEAAVGSQVHVLSSAEETAKDVEAILSY--TGQLRTDEEPPK 232 Query: 248 HALFLSGK----PDIAMRRLMQG 266 H L SG IA R L +G Sbjct: 233 HILHASGSVPIFRSIAERWLEKG 255 >gi|19745519|ref|NP_606655.1| glutamate racemase [Streptococcus pyogenes MGAS8232] gi|139474362|ref|YP_001129078.1| glutamate racemase [Streptococcus pyogenes str. Manfredo] gi|24418567|sp|Q8P2D3|MURI_STRP8 RecName: Full=Glutamate racemase gi|166231061|sp|A2RG97|MURI_STRPG RecName: Full=Glutamate racemase gi|19747638|gb|AAL97154.1| putative glutamate racemase [Streptococcus pyogenes MGAS8232] gi|134272609|emb|CAM30876.1| glutamate racemase [Streptococcus pyogenes str. Manfredo] Length = 264 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 28/252 (11%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + + Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E+++ + LG V P A T G + ++ TP T Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190 + S + + I L++ + +V AC + I E I K+I + Sbjct: 121 ---VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVG 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246 + D +VL CTHYPL+ + + + V +D+ R LL N HQ V Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232 Query: 247 DHALFLSGKPDI 258 +H F + P+I Sbjct: 233 EHRFFTTANPEI 244 >gi|154501141|ref|ZP_02039179.1| hypothetical protein BACCAP_04830 [Bacteroides capillosus ATCC 29799] gi|150269833|gb|EDM97368.1| hypothetical protein BACCAP_04830 [Bacteroides capillosus ATCC 29799] Length = 259 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 9/217 (4%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI--LDKYQPVLS 80 +GGL ++++ LMPE +Y D PYG+ + K + D+ L+ + Sbjct: 1 MGGLTAVRELIHLMPEEDIVYFGDTGRVPYGSRSRDTIIK---YARQDVAFLNTFDLKAV 57 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 VIAC T T + L P + LG V PA+ +A A T+SG I ++ T AT+R Sbjct: 58 VIACGTVSTTALEVLEQENP-IPVLGVVRPAVAEAVAATRSGKIGLIGTQATIRTGAYEK 116 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 I + + + + VE K E+ E +++ G D +VL C Sbjct: 117 YIAKLLPDAQVTARACPLFVPLVENGRFRPGDKVAEMVAEEYLTPLKEAG--VDTLVLGC 174 Query: 200 THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 THYPL+ V V ++ + AR+ +L + Sbjct: 175 THYPLLSQVIGNFMGPDVKLINTGAACARQVAAMLKK 211 >gi|222530006|ref|YP_002573888.1| glutamate racemase [Caldicellulosiruptor bescii DSM 6725] gi|222456853|gb|ACM61115.1| glutamate racemase [Caldicellulosiruptor bescii DSM 6725] Length = 267 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 9/201 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+ Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDVPIVAVIE--PGAEAAVRSTKNKKIGVIGTEGTIS 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + + + VEE ++ K+ +E E K D Sbjct: 123 SGAFEKKILELDNSIKVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFNEKAID 178 Query: 194 VIVLACTHYPLIVHVFRQLSP 214 +VL CTHYP + V R++ P Sbjct: 179 TLVLGCTHYPFLQDVIRKVLP 199 >gi|212697494|ref|ZP_03305622.1| hypothetical protein ANHYDRO_02064 [Anaerococcus hydrogenalis DSM 7454] gi|212675493|gb|EEB35100.1| hypothetical protein ANHYDRO_02064 [Anaerococcus hydrogenalis DSM 7454] Length = 249 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 17/218 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70 +I +FDSG+GGL VL+++ +F Y+ D+ PYGN + + K + FL Sbjct: 3 NIGVFDSGLGGLTVLRELSKKHKANYF-YLGDNKNVPYGNRSNEEIIKLSKDIVRFLIKK 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +D + VIACNT + ELR F IK+A ++G + +++T A Sbjct: 62 DIDFF-----VIACNTISVVAIKELRKEFDKKFISITDEGIKEA--LNRNGDVFVMATKA 114 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T + +I S+ ++ S L +EE GI + ++I +++ K Sbjct: 115 TCKNHAYKKIIEGRSSK-KVYEKSCPKLVDYIEE---GI-LSGEKIDSQLKDYLTLANEK 169 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + + I+L CTHYP+I + + + +D + +AR Sbjct: 170 KIENIILGCTHYPIIKKTIEKNLTYKANIIDPAKVLAR 207 >gi|94989807|ref|YP_597907.1| glutamate racemase [Streptococcus pyogenes MGAS10270] gi|166231059|sp|Q1JIG0|MURI_STRPD RecName: Full=Glutamate racemase gi|94543315|gb|ABF33363.1| Glutamate racemase [Streptococcus pyogenes MGAS10270] Length = 264 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 28/256 (10%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + Sbjct: 5 AIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQ 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 ++ V ACNTA + +E+++ + LG + P A T G + ++ TP T Sbjct: 65 NVKMI-VFACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT-- 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIE 186 + S + + I L++ + +V AC + I E I K+I + Sbjct: 121 -------VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLS 170 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQT 242 + D +VL CTHYPL+ + + + V +D+ R LL N HQ Sbjct: 171 PLVGKIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQK 230 Query: 243 RVFDDHALFLSGKPDI 258 V +H F + P+I Sbjct: 231 AV--EHRFFTTANPEI 244 >gi|150010273|ref|YP_001305016.1| glutamate racemase [Parabacteroides distasonis ATCC 8503] gi|301308360|ref|ZP_07214314.1| glutamate racemase [Bacteroides sp. 20_3] gi|149938697|gb|ABR45394.1| glutamate racemase [Parabacteroides distasonis ATCC 8503] gi|300833830|gb|EFK64446.1| glutamate racemase [Bacteroides sp. 20_3] Length = 276 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 29/237 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S + + Sbjct: 9 IGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSRLFES- 67 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA T+ + +L + P+ LG + P ++ +++ I I+ T Sbjct: 68 GCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVGTS 127 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186 T+ TSN + + + H+ +V AC + ++ +E F++ Sbjct: 128 GTI----TSNSYTIEIGRMYPHI--------QVTGEACPMWVPLVENNEFNSPGADYFVK 175 Query: 187 KE-------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 K + D ++L CTHYPL++ R P + + +A R L R Sbjct: 176 KHIDHLLSVDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGR 232 >gi|262199960|ref|YP_003271169.1| glutamate racemase [Haliangium ochraceum DSM 14365] gi|262083307|gb|ACY19276.1| glutamate racemase [Haliangium ochraceum DSM 14365] Length = 268 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 13/227 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V++ +R +P+ Y+ D PYG+ +++ + +L++ Sbjct: 8 IGVFDSGVGGLTVVRAVRAALPDRDIAYLGDTARVPYGSKSARTVERYALACQRFLLER- 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L ++ACNTA L + P A A + I ++ T AT+ Sbjct: 67 EVDLVLVACNTASATALPALAAASQVPVVGVVEPGAASAVAASTCMHIGVIGTLATVGSG 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK---EGKRT 192 IH+ + V+ +L EE +D+I + + ++ + + Sbjct: 127 AYPRAIHALAPGAAVSAVACPLLVPLAEE-----GWVDDDIARAVARRYLARLFEQDAEI 181 Query: 193 DVIVLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARCLLP 235 D +VL CTHYPL+ V + L PV +D++ ++A AR P Sbjct: 182 DTLVLGCTHYPLLAEVLAETAAALVGHPVAIVDSASAMAEVARAHGP 228 >gi|325859706|ref|ZP_08172836.1| glutamate racemase [Prevotella denticola CRIS 18C-A] gi|325482632|gb|EGC85635.1| glutamate racemase [Prevotella denticola CRIS 18C-A] Length = 279 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 17/231 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + ++ +M LF Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGSRSFDIVYQFTRQAVMKLFG-- 68 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 L ++ CNTA T+ +++L + P+ LG + P + T+S + + Sbjct: 69 ---LGCQLVILGCNTASAKALRTIQQNDLPALDPNRRVLGVIRPTAEIIGRLTRSRHVGL 125 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T T+R + I + V + +E + +KK I+ I Sbjct: 126 LATEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRID--HI 183 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + + D ++L CTHYP+++ + P V + + +A R L R Sbjct: 184 MRIDPQIDSLILGCTHYPILMPKILKHVPRGVRIIPQGEYVAESLRDYLRR 234 >gi|260892383|ref|YP_003238480.1| glutamate racemase [Ammonifex degensii KC4] gi|260864524|gb|ACX51630.1| glutamate racemase [Ammonifex degensii KC4] Length = 265 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 16/247 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLM-FLFSDI 71 I +FDSG+GGL VL ++ L+P +Y AD + PYG+ E AL R++ FL + Sbjct: 7 IGLFDSGVGGLTVLAQIVRLLPHESIVYFADTLNLPYGDKTPAELIALGDRIIRFLLAQG 66 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130 + V ACNT+ ++ + L+ +P + LG + A + A ++ G I IL+T A Sbjct: 67 VK-----CVVFACNTSSSISLEVLQQRYP-VPMLGLLQAGARLALKSSRRGRIGILATAA 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I Q + ++ L +E +I E + + + Sbjct: 121 TVKSGAYEKAIKDLCPQAQVFSQAAPRLVPLIESG----EIDTPEAEAALREYLTPLKEA 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D ++ CTHYP + + V +D + ++ + LL + H + Sbjct: 177 GIDTLIFGCTHYPFLAPLISSFMGPGVALVDPAVAVVEELKELLSQKGLLANST-PFHRI 235 Query: 251 FLSGKPD 257 F+SG P+ Sbjct: 236 FVSGDPE 242 >gi|167747288|ref|ZP_02419415.1| hypothetical protein ANACAC_02002 [Anaerostipes caccae DSM 14662] gi|167653266|gb|EDR97395.1| hypothetical protein ANACAC_02002 [Anaerostipes caccae DSM 14662] Length = 272 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 7/220 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V +++ +P+ IY D PYG + + + + +L K Sbjct: 10 IGVFDSGVGGLTVAREIMRQLPDESLIYFGDTARVPYGTKSKDTVIRYSRQIVNFLLSKN 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA L +L+ + + +G V P AA T++ I I+ T AT++ Sbjct: 70 VKAI-VIACNTASALAMHKLQQEY-IVPMIGMVRPGAIAAARATKNHHIGIIGTNATVKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + + + VEE +I ED + + + E + + D Sbjct: 128 GQYGKYLRELNPDVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYLR----EFDQYQIDS 183 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++L CTHYPL+ + + V ++ + A+ R LL Sbjct: 184 LILGCTHYPLLQNPIKNFVGDNVTLINPAYETAKSLRELL 223 >gi|224823853|ref|ZP_03696962.1| glutamate racemase [Lutiella nitroferrum 2002] gi|224604308|gb|EEG10482.1| glutamate racemase [Lutiella nitroferrum 2002] Length = 270 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 14/233 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I +FDSG+GGL V++ + +P IY D PYG + A + + Sbjct: 4 KARRPIGVFDSGVGGLTVVRALMDRLPFEDIIYFGDTARVPYG-VKSVATIRAFSRQIVE 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTP 129 L +++ V+ACNT + +++R + +G + A QAA +++ I +++T Sbjct: 63 FLLQHEVKALVVACNTISAVALEQVRELAGDIPVIGVIEAGAQAAVKVSKNHEIGVIATS 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE----YACGIKIKEDEIKKEIEGCFI 185 T+ + IH + ++ + + VEE + E+ +K +E Sbjct: 123 TTINSNAYAREIHRLMPDARVYSQACPLFVPLVEEGWVDHPVTRLTAEEYLKTVLE---- 178 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D +VL CTHYPLI + +++ V+ +D++ + A +L +N Sbjct: 179 ----EHVDTLVLGCTHYPLIKPLLTEVTGGRVELVDSALTTAEATAEVLAGLN 227 >gi|152967707|ref|YP_001363491.1| glutamate racemase [Kineococcus radiotolerans SRS30216] gi|151362224|gb|ABS05227.1| glutamate racemase [Kineococcus radiotolerans SRS30216] Length = 282 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 8/222 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I IFDSG+GGL V + + +P YV D PYG + A +RL Sbjct: 3 PARPDADLPIGIFDSGVGGLTVARAVLDQLPHEAVHYVGDTAHAPYGP-KPIAEVRRLAL 61 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 D L + + VIACN+A + + R + PA+++A T++G + ++ Sbjct: 62 DVLDRLVESGVKMLVIACNSASAAMLRDARERYDVPVVEVIQPAVRRAVRATRNGRVGVI 121 Query: 127 STPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 T AT+ R Y ++ + H+ L ++ A VE G+ E+ G Sbjct: 122 GTRATISSRAYED----AFAAAPHLALTTAACPAF-VEFVERGVT-SGPELLTAARGYLA 175 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTHYPL++ V R + V + +++ A Sbjct: 176 PAIAADVDTLVLGCTHYPLLMAVLRSVVGDDVTLVSSAEETA 217 >gi|121637269|ref|YP_977492.1| glutamate racemase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989743|ref|YP_002644430.1| glutamate racemase [Mycobacterium bovis BCG str. Tokyo 172] gi|166231041|sp|A1KIC8|MURI_MYCBP RecName: Full=Glutamate racemase gi|254766119|sp|C1AMY3|MURI_MYCBT RecName: Full=Glutamate racemase gi|121492916|emb|CAL71387.1| Probable glutamate racemase murI [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772856|dbj|BAH25662.1| glutamate racemase [Mycobacterium bovis BCG str. Tokyo 172] Length = 271 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 13/236 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ + Sbjct: 10 VFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVGRGVK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACN+A + + R + +PA+++A A T++G I ++ T R T T Sbjct: 70 AL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGT----RATIT 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 S+ + ++++ V+ G+ ++ +G + D +VL Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVELGVT-SGRQVLGLAQGYLEPLQRAEVDTLVL 183 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-------THQTRVFD 246 CTHYPL+ + + V + +++ A+ +L I+ TR+F+ Sbjct: 184 GCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFE 239 >gi|256839107|ref|ZP_05544617.1| glutamate racemase [Parabacteroides sp. D13] gi|262382441|ref|ZP_06075578.1| glutamate racemase [Bacteroides sp. 2_1_33B] gi|256740026|gb|EEU53350.1| glutamate racemase [Parabacteroides sp. D13] gi|262295319|gb|EEY83250.1| glutamate racemase [Bacteroides sp. 2_1_33B] Length = 276 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 29/237 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S + + Sbjct: 9 IGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSRLFES- 67 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA T+ + +L + P+ LG + P ++ +++ I I+ T Sbjct: 68 GCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVGTS 127 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186 T+ TSN + + + H+ +V AC + ++ +E F++ Sbjct: 128 GTI----TSNSYTIEIGRMYPHI--------QVTGEACPMWVPLVENNEFNSPGADYFVK 175 Query: 187 KE-------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 K + D ++L CTHYPL++ R P + + +A R L R Sbjct: 176 KHIDHILSVDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGR 232 >gi|257056887|ref|YP_003134719.1| glutamate racemase [Saccharomonospora viridis DSM 43017] gi|256586759|gb|ACU97892.1| glutamate racemase [Saccharomonospora viridis DSM 43017] Length = 265 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 9/214 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P YV D + PYG +++ + ++ Sbjct: 11 IGIFDSGVGGLTVARAVADQLPAERLRYVGDTLHAPYGPLPIARVRELALRALDGLVADG 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-R 134 L VIACNTA + R + F +PA ++A A T++G + ++ T T+R R Sbjct: 71 VKAL-VIACNTASAACLRDARERYDIPVFEVVLPAARRAVATTRNGHVGLIGTEGTVRSR 129 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y L + V +SS+ VE G+ +I +G D Sbjct: 130 AYDDALAATGVR------LSSVACPRFVEFVERGVTSGR-QILGLAQGYLEPLTRADVDT 182 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++L CTHYPL+ V + + V + +++ A+ Sbjct: 183 LILGCTHYPLLTGVLQTVMGPDVTLVSSAEETAK 216 >gi|295092631|emb|CBK78738.1| glutamate racemase [Clostridium cf. saccharolyticum K10] Length = 271 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 13/223 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILD 73 I +FDSG+GGL V +++ MPE +Y D PYG + + R + F L Sbjct: 7 IGVFDSGVGGLTVAREIMRQMPEEKLVYFGDTARVPYGTKSQETVIRYSRQIIRF---LR 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATL 132 + VIACNTA + + + +G + A K A T++ I I+ T AT+ Sbjct: 64 TKEVKAIVIACNTATACALETVEKDL-DIPIIGVIHAGAKAAVEATKNRKIGIIGTEATI 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191 R + L+ + + VEE + D + EI ++ + K Sbjct: 123 RSGVYTELMKQMNPAIEVTGKPCPLFVPLVEE-----GLLHDSVTDEIASRYLASLKEKY 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +V+ CTHYPL+ +L V ++ + AR + LL Sbjct: 178 IDTLVMGCTHYPLLRSTLARLMGEEVTLINPAYETARELKSLL 220 >gi|255012458|ref|ZP_05284584.1| glutamate racemase [Bacteroides sp. 2_1_7] Length = 276 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 29/237 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S + + Sbjct: 9 IGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSRLFES- 67 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA T+ + +L + P+ LG + P ++ +++ I I+ T Sbjct: 68 GCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVGTS 127 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186 T+ TSN + + + H+ +V AC + ++ +E F++ Sbjct: 128 GTI----TSNSYTIEIGRMYPHI--------QVTGEACPMWVPLVENNEFNSPGADYFVK 175 Query: 187 KE-------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 K + D ++L CTHYPL++ R P + + +A R L R Sbjct: 176 KHIDHILSVDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGR 232 >gi|323142469|ref|ZP_08077289.1| glutamate racemase [Phascolarctobacterium sp. YIT 12067] gi|322413046|gb|EFY03945.1| glutamate racemase [Phascolarctobacterium sp. YIT 12067] Length = 267 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 6/190 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL VL+ + ++P FIYV D PYG + ++ + + D L Sbjct: 7 IGVLDSGVGGLSVLKCLHQMLPYEDFIYVGDTARTPYGTRSEQEIRGFVGEII-DWLAAK 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNT L D LR T P +G +Q A + + I +L+T T+ Sbjct: 66 NVKQVVIACNTLTMLGVDSLRGTHP-FGVVGMSKGAQQLLAASPNKKIGVLATQFTIASG 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 I + +Q ++ V+ +E G + E+++ I + + + Sbjct: 125 LHKKAILAADAQAQVYPVACPKFVPLIE----GERFDSPELQQAIAEYTEPFKKAGVEAV 180 Query: 196 VLACTHYPLI 205 +L+CTHYP I Sbjct: 181 ILSCTHYPFI 190 >gi|329941791|ref|ZP_08291056.1| glutamate racemase [Streptomyces griseoaurantiacus M045] gi|329299508|gb|EGG43408.1| glutamate racemase [Streptomyces griseoaurantiacus M045] Length = 261 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 81/196 (41%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D G P+G L R + + + Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLVLSSDPEGMPWGPRTPEDLTVRALAVAE-AAAAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ P + +G VPAIK AAA G +I +TPAT Sbjct: 62 RPDALIVACNTASVHTLPTLRARLEPGLPVIGTVPAIKPAAA--GGGPFAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + + V+ LA V+ G T V Sbjct: 120 PYQRGLIEEFAAGLDVAEVACPGLAEAVQHADEAAIDAAIADA------AARTPGDVTTV 173 Query: 195 IVLACTHYPLIVHVFR 210 VL CTHY L+ R Sbjct: 174 -VLGCTHYELVAERIR 188 >gi|325847040|ref|ZP_08169866.1| glutamate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481012|gb|EGC84057.1| glutamate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 248 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 17/218 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70 +I +FDSG+GGL VL+++ +F Y+ D+ PYGN + + K + FL Sbjct: 3 NIGVFDSGLGGLTVLRELSKKHKANYF-YLGDNKNVPYGNKSNEEIIKLSKDIVKFLIKK 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +D + VIACNT + ELR F IK+A ++G + +++T A Sbjct: 62 DIDFF-----VIACNTISVVAIKELREEFDKKFISITDEGIKEA--LNKNGDVFVMATKA 114 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T + +I S+ ++ S L +EE GI + ++I +++ K Sbjct: 115 TCKNHAYKKIIEGRSSK-KVYEESCPKLVDYIEE---GI-LSGEKIDSQLKDYLTIANEK 169 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + + I+L CTHYP+I + + + +D + +AR Sbjct: 170 KIENIILGCTHYPIIKKTIEKNLTYKANIIDPAKVLAR 207 >gi|317471031|ref|ZP_07930406.1| Asp/Glu/Hydantoin racemase [Anaerostipes sp. 3_2_56FAA] gi|316901472|gb|EFV23411.1| Asp/Glu/Hydantoin racemase [Anaerostipes sp. 3_2_56FAA] Length = 272 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 7/220 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V +++ +P+ IY D PYG + + + + +L K Sbjct: 10 IGVFDSGVGGLTVAREIMRQLPDESMIYFGDTARVPYGTKSKDTVIRYSRQIVNFLLSKN 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA L +L+ + + +G V P AA T++ I I+ T AT++ Sbjct: 70 VKAI-VIACNTASALAMHKLQQEY-IVPMIGMVRPGAIAAARATKNHHIGIIGTNATVKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + + + VEE +I ED + + + E + + D Sbjct: 128 GQYGKYLRELNPDVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYLR----EFDQYQIDS 183 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++L CTHYPL+ + + V ++ + A+ R LL Sbjct: 184 LILGCTHYPLLQNPIKNFVGDNVTLINPAYETAKSLRELL 223 >gi|288959026|ref|YP_003449367.1| glutamate racemase [Azospirillum sp. B510] gi|288911334|dbj|BAI72823.1| glutamate racemase [Azospirillum sp. B510] Length = 299 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 22/238 (9%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++L+ I +FDSG GGL VL+ + P F+Y+ D PYG + + RL Sbjct: 15 RRLKQLIGVFDSGHGGLTVLRALVDAAPGRPFVYLGDHAAAPYGPRSEDDI-YRLTIAGM 73 Query: 70 DILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 D L L VIACNTA L ++ L S P LG + + A T+ + Sbjct: 74 DRLFAQGCRLVVIACNTAAAVALRRLQQEWLPSAHPGRNVLGVL--VPMVEAITRVPWMI 131 Query: 125 ILSTPATLRRTYTSNLIHSYV---SQCHIHLVSSMILASRVEEYACGIKIK-------ED 174 P L T + + S + + RV + AC + + Sbjct: 132 DTVPPDHLAEPRTVGIFATLATVNSGSFPREIGKRAPSVRVVQQACPDLVPLIERGAADG 191 Query: 175 EIKKEIEG---CFIEKEGKRT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 EI+ + G ++K G++ D +VL CTHYPL+ H+F + P V+ L AR Sbjct: 192 EIEPAVAGYVRVLLDKLGRQPLDAVVLGCTHYPLVRHLFARALPPGVEILSQPTLTAR 249 >gi|11386940|sp|Q9L4V5|MURI_CARST RecName: Full=Glutamate racemase gi|8102037|gb|AAF72713.1|AF263927_1 glutamate racemase [Carnobacterium sp. St2] Length = 268 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 11/229 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I DSG+GGL V+++ +P YV D PYG + ++K + +L Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEDQVRKFTWEMTHFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 DK +L VIACNTA +++ ++ +G + P + A T + I ++ T T Sbjct: 63 DKNIKML-VIACNTATAAALKDIKKKL-AIPVIGVILPGSRAAIKATHTNRIGVIGTEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ +IHS ++ + ++ VE EY+ I KK + + Sbjct: 121 VKSNQYKKMIHSKDTKALVTSLACPKFVPLVESNEYSSAIA------KKVVAETLRPLKN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D ++L CTHYPL+ + + V +D+ +L N Sbjct: 175 EGLDTLILGCTHYPLLRPIIQNTLGDSVTLIDSGAETVSEVSTILDYFN 223 >gi|119490901|ref|ZP_01623184.1| glutamate racemase [Lyngbya sp. PCC 8106] gi|119453719|gb|EAW34878.1| glutamate racemase [Lyngbya sp. PCC 8106] Length = 284 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 9/212 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I +FDSG+GGL VL+++ +P +Y D PYG + + + + Sbjct: 5 KKARKIAVFDSGVGGLTVLRELYQQLPNESILYFGDTARLPYGTRSQSEILQFVREIIIW 64 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +D+ ++ V+ACNT+ L + ++S F ++ LG + P K AA + I +++TP Sbjct: 65 AIDQDVKMI-VMACNTSSALALETVQSEF-NVPILGVILPGAK--AAVQKGRRIGVIATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ I + + VS +E+ +I + + + Sbjct: 121 ATVTSNAYRQAIQEMDATVQVWQVSCPEFVPLIEQN----RIHDPYTYQVAQEYLAPLLD 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 +R D ++ CTHYP + V R L P V +D Sbjct: 177 QRIDTLIYGCTHYPHLAPVLRSLLPPSVQLVD 208 >gi|300775208|ref|ZP_07085070.1| glutamate racemase [Chryseobacterium gleum ATCC 35910] gi|300505948|gb|EFK37084.1| glutamate racemase [Chryseobacterium gleum ATCC 35910] Length = 276 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 8/223 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V ++++ L+P IY D PYG A+ + + + +L++ Sbjct: 17 IGIFDSGVGGLTVAKEIKRLLPNEDLIYFGDTKHLPYGEKSREAIIEYSTKITNFLLEQN 76 Query: 76 QPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA +E ++S + + + + + +Y + +++T AT+ Sbjct: 77 CKAI-VIACNTATANALNEVMQSVAGRVPVIDVINPVAEKVSYEIHNNVGVIATKATVNS 135 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRTD 193 I + + +++ +L +EE K I I ++ K + Sbjct: 136 GLYKKSIRKHNKWIKVDELATPLLVPAIEE-----GFKNHPITHAIIYNYLSNSKLKNIE 190 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++L CTHYPL++ +Q V +D+ + +A + ++ + Sbjct: 191 TLILGCTHYPLLIDEIKQYYGNRVRVIDSPNIVANHLKIIMDK 233 >gi|6980778|pdb|1B73|A Chain A, Glutamate Racemase From Aquifex Pyrophilus gi|6980779|pdb|1B74|A Chain A, Glutamate Racemase From Aquifex Pyrophilus Length = 254 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 9/212 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R + +Y+ D PYG + + + + DK Sbjct: 3 IGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA + L+ F P +K+A +++ I ++ TPAT++ Sbjct: 63 VDII-VVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + + + A EE + E EI +++ ++++ + D + Sbjct: 122 AYQRKLEE--GGADVFAKACPLFAPLAEE-----GLLEGEITRKVVEHYLKEFKGKIDTL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 +L CTHYPL+ ++ + +D+S++++ Sbjct: 175 ILGCTHYPLLKKEIKKFL-GDAEVVDSSEALS 205 >gi|56808577|ref|ZP_00366308.1| COG0796: Glutamate racemase [Streptococcus pyogenes M49 591] gi|94987933|ref|YP_596034.1| glutamate racemase [Streptococcus pyogenes MGAS9429] gi|94991817|ref|YP_599916.1| glutamate racemase [Streptococcus pyogenes MGAS2096] gi|209558858|ref|YP_002285330.1| glutamate racemase [Streptococcus pyogenes NZ131] gi|166231057|sp|Q1JDD6|MURI_STRPB RecName: Full=Glutamate racemase gi|166231058|sp|Q1JNA9|MURI_STRPC RecName: Full=Glutamate racemase gi|226707592|sp|B5XJX3|MURI_STRPZ RecName: Full=Glutamate racemase gi|94541441|gb|ABF31490.1| glutamate racemase [Streptococcus pyogenes MGAS9429] gi|94545325|gb|ABF35372.1| Glutamate racemase [Streptococcus pyogenes MGAS2096] gi|209540059|gb|ACI60635.1| Glutamate racemase [Streptococcus pyogenes NZ131] Length = 264 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 28/252 (11%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + + Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E+++ + LG V P A T G + ++ TP T Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190 + S + + I L++ I +V AC + I E I K+I + Sbjct: 121 ---VASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVG 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246 + D +VL CTHYPL+ + + + V +D+ R LL N HQ V Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232 Query: 247 DHALFLSGKPDI 258 H F + P+I Sbjct: 233 KHRFFTTANPEI 244 >gi|219684903|ref|ZP_03539845.1| glutamate racemase [Borrelia garinii PBr] gi|219671848|gb|EED28903.1| glutamate racemase [Borrelia garinii PBr] Length = 304 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 21/204 (10%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIVFDSGIGGLSYFKYIKNKIDRYQYVYVADNKNFPYGEKSSEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 +++L + Y ++ACNT + ++L FP + L V I A + Sbjct: 100 ILYLIEKLNKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSLISDLAL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKK 178 +++T TL + + Q ++H +I+ + E EY G K ++D ++ Sbjct: 156 LLIATNTTLESKFVKD-------QVNMH--DDLIVKAAGELVNFVEY--GEKYRKDALRC 204 Query: 179 EIEGCFIEKEGKRTDVIVLACTHY 202 +E E +++ L CTHY Sbjct: 205 -LEALKFEVVNTDREIVFLGCTHY 227 >gi|289706341|ref|ZP_06502699.1| glutamate racemase [Micrococcus luteus SK58] gi|289556836|gb|EFD50169.1| glutamate racemase [Micrococcus luteus SK58] Length = 310 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 16/220 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P +YV D PYG ++ + + +++ + Sbjct: 14 IGVFDSGVGGLTVARAIMDQLPHESILYVGDTEHSPYGPRPIAEVRALALAIMDELVARG 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 L VIACN+A + + R + + + PA+++A A T++G I ++ T AT Sbjct: 74 VKAL-VIACNSASAAVLRDARERYTGGHGIPVIEVIQPAVRRAVAATRTGRIGVIGTEAT 132 Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKE 188 + R Y S+ + H+ ++S+ VE GI + E +E Sbjct: 133 VGSRAYED----SFSAAPHLE-ITSVACPRFVEFVEAGITTGPELLETAREYTAPL---R 184 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYPL+ + V + +++ A+ Sbjct: 185 AAGVDTLVLGCTHYPLLTGALSLVMGEDVTLVSSAEETAK 224 >gi|218438768|ref|YP_002377097.1| glutamate racemase [Cyanothece sp. PCC 7424] gi|226722981|sp|B7KCC4|MURI_CYAP7 RecName: Full=Glutamate racemase gi|218171496|gb|ACK70229.1| glutamate racemase [Cyanothece sp. PCC 7424] Length = 278 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 13/248 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL--FSD 70 ++ I IFDSG+GGL VL+++ +P +Y AD PYG + + L F+ D Sbjct: 6 RSPIGIFDSGVGGLTVLRELYRRLPNESILYFADTARLPYGT---RSAGEILQFVREIMD 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTP 129 + Q + ++ACNT+ L + +R F ++ LG + + A A Q G I +++TP Sbjct: 63 WMTSQQVKMVIMACNTSSALALEAIRDEF-ALPVLGVI--LPGARAAVQKGKRIGVIATP 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT I S + V +E+ + E+ K+ ++ Sbjct: 120 ATAASNAYRQAIEEIDSTAQVWQVGCPDFVPLIEQNRL-YEPYTKEVAKQYLNPLLQVN- 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D +V CTHY + +FRQ+ P + +D + + A L + T Sbjct: 178 --IDTLVYGCTHYRHLEPLFRQILPPSISLVDPAQYVVSAAEKELELLGLKSTLPCLPTR 235 Query: 250 LFLSGKPD 257 +SG P+ Sbjct: 236 FCVSGNPE 243 >gi|116235003|dbj|BAF34941.1| putative glutamate racemase [Hydrogenobacter thermophilus] Length = 206 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 17/199 (8%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL++++ P +Y+ D PYG + R ++ L ++ Sbjct: 5 VFDSGVGGLTVLKEIKKAFPSLDLVYLGDTARVPYGGKSKDTI-IRYSLECAEFLIRFDI 63 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR-TY 136 L V+ACNTA + D L+ F P +++A +++ +I ++ T +T++ Y Sbjct: 64 DLLVVACNTASSYALDILKKELGIPVFGVIKPGVRKALEVSKNKVIGVIGTKSTIKSGVY 123 Query: 137 TSNLIHS----YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +L+ + Y C + + VEE G+ D + K ++ + + + Sbjct: 124 QRSLMEAGSVVYAKACPLFV-------PLVEE---GLT-HGDIVDKVVDFYLRDFKNTQM 172 Query: 193 DVIVLACTHYPLIVHVFRQ 211 D ++L CTHYPL+ + Sbjct: 173 DTLILGCTHYPLLAEAIKN 191 >gi|4996220|dbj|BAA78374.1| D-glutamate racemase [Corynebacterium glutamicum] Length = 284 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 14/199 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++ Sbjct: 24 IGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADELVERG 83 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ VIACNTA + R + +PA+++A A T++G + ++ T T+ Sbjct: 84 CKMI-VIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTINSG 142 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----IKIKEDEIKKEIEGCFIEKEGKR 191 +L + S ++ V+ VE + I +D ++ ++ EG Sbjct: 143 AYQDLFSASPS-IEVNAVACPRFVDFVERGITSGRQILNIAQDYLEP------LQAEG-- 193 Query: 192 TDVIVLACTHYPLIVHVFR 210 D +VL CTHYPL+ V + Sbjct: 194 VDTLVLGCTHYPLLSGVIQ 212 >gi|30019021|ref|NP_830652.1| glutamate racemase [Bacillus cereus ATCC 14579] gi|229126278|ref|ZP_04255296.1| Glutamate racemase [Bacillus cereus BDRD-Cer4] gi|29894563|gb|AAP07853.1| Glutamate racemase [Bacillus cereus ATCC 14579] gi|228657270|gb|EEL13090.1| Glutamate racemase [Bacillus cereus BDRD-Cer4] Length = 276 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA EL+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLEVHSYACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|51598363|ref|YP_072551.1| glutamate racemase [Borrelia garinii PBi] gi|51572934|gb|AAU06959.1| glutamate racemase [Borrelia garinii PBi] Length = 260 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 21/198 (10%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I++FDSGIGGL + ++ M Y ++YVAD+ FPYG L + +++L Sbjct: 2 KNFKEVIIVFDSGIGGLSYFKYIKNKMDGYQYVYVADNKNFPYGEKSSEYLLEAVLYLIE 61 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + Y ++ACNT + ++L FP + L V +I + +++T Sbjct: 62 KLNKIYNISALILACNTISVSVYNKLNFIFPVVYTLPEVSSISDLVL----KRVLLIATN 117 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184 TL + + Q ++H + +I+ + E EY G K ++D I+ +E Sbjct: 118 TTLESKFVKD-------QVNMH--NDLIIKAAGELVNFVEY--GEKYRKDAIRC-LEALK 165 Query: 185 IEKEGKRTDVIVLACTHY 202 E +++ L CTHY Sbjct: 166 FEVVNTGREIVFLGCTHY 183 >gi|227833923|ref|YP_002835630.1| Glutamate racemase [Corynebacterium aurimucosum ATCC 700975] gi|262184926|ref|ZP_06044347.1| glutamate racemase [Corynebacterium aurimucosum ATCC 700975] gi|227454939|gb|ACP33692.1| Glutamate racemase [Corynebacterium aurimucosum ATCC 700975] Length = 258 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 22/205 (10%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V + + +P+ IY+ D PYG +++ + ++++ Sbjct: 6 SPIGIFDSGVGGLTVARTIIEQLPDESIIYIGDTAHAPYGPRPIAQVRELSTAIADELVE 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + +L VIACNTA + R + PA+++A A T++G I ++ T T+ Sbjct: 66 RGCKML-VIACNTATAAFLHDARERYDIPVVEVIRPAVRRAIATTRNGKIGVIGTEGTIN 124 Query: 134 RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 +L + C ++ V I A R +I EG Sbjct: 125 SGAYQDLFAVNPNVECEAVACPDFVNFVERGITAGR-------------QILGVAEGYLA 171 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFR 210 + D +VL CTHYPL+ V + Sbjct: 172 PLQSAGVDTLVLGCTHYPLLTGVIQ 196 >gi|283796789|ref|ZP_06345942.1| glutamate racemase [Clostridium sp. M62/1] gi|291075679|gb|EFE13043.1| glutamate racemase [Clostridium sp. M62/1] gi|295115201|emb|CBL36048.1| glutamate racemase [butyrate-producing bacterium SM4/1] Length = 271 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 13/223 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILD 73 I +FDSG+GGL V +++ MPE +Y D PYG + + R + F L Sbjct: 7 IGVFDSGVGGLTVAREIMRQMPEEKLVYFGDTARVPYGTKSQETVIRYSRQIIRF---LR 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATL 132 + VIACNTA + + + +G + A +AA T++ I I+ T AT+ Sbjct: 64 TKEVKAIVIACNTATACALETVEKDL-DIPIIGVIHAGARAAVEATKNRKIGIIGTEATI 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191 R + L+ + + VEE + D + EI ++ + K Sbjct: 123 RSGVYTELMKQMNPAIEVTGKPCPLFVPLVEE-----GLLHDSVTDEIASRYLASLKEKY 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +V+ CTHYPL+ +L V ++ + AR + LL Sbjct: 178 IDTLVMGCTHYPLLRSTLARLMGEEVTLINPAYETARELKSLL 220 >gi|291458619|ref|ZP_06598009.1| glutamate racemase [Oribacterium sp. oral taxon 078 str. F0262] gi|291419152|gb|EFE92871.1| glutamate racemase [Oribacterium sp. oral taxon 078 str. F0262] Length = 279 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 28/229 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKR-LMFLFSDI 71 I IFDSG+GG+ V++ ++ +P I+ D PYG E AL +R FL Sbjct: 22 IGIFDSGVGGISVVKALKRELPGEDLIFFGDSKNAPYGEKSVEEIRALSERSYQFLRGQR 81 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTP 129 + VIACNTA + + LR P +G PA+K A A + I +L+T Sbjct: 82 VKAV-----VIACNTATSAAAELLREENPGEIIVGMEPALKPAIENAGRERPEILVLATS 136 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSS-----MILASRVEEYACGIKIKE--DEIKKEIEG 182 +TL L +H + + M+ A R + ++E ++ +G Sbjct: 137 STLGGERFHKLAARLGMGARVHSLPAPEIVRMVEAGREDSDEMRSYLRELLRPYRRMADG 196 Query: 183 ---CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 C + D +VL CTH+P R++ +PV D ++ AR Sbjct: 197 TIRCPL-------DGLVLGCTHFPFAKRAIREVLSYPVPIYDGAEGTAR 238 >gi|241895985|ref|ZP_04783281.1| glutamate racemase [Weissella paramesenteroides ATCC 33313] gi|241870716|gb|EER74467.1| glutamate racemase [Weissella paramesenteroides ATCC 33313] Length = 277 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 8/217 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSGIGGL V+++ +P+ Y+ D PYG +KK + D L + Sbjct: 9 LDSGIGGLSVVKQALKQLPDEQVYYIGDTARMPYGPRTSDEVKK-FTWQLVDFLMEKDIK 67 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA D+L P + +G + P + A+ T+S I I++T T+ Sbjct: 68 LLVVACNTATAATLDDLIKYLP-IPVVGVIQPGVDAASQVTESNNIGIIATQGTVNSMAY 126 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + + H+ +++ L E+ + E + + + + + D +VL Sbjct: 127 YDGLKKINADFHVLQLATPTLVKIAEQP----EKNELTVNQVVTKVLLPIKASGIDTLVL 182 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLD-NSDSIARRARCL 233 CTH+PL+ ++ V +D + +IA A+ L Sbjct: 183 GCTHFPLLAKFIQESVGEQVKLVDPGTSTIAAVAQIL 219 >gi|332300836|ref|YP_004442757.1| Glutamate racemase [Porphyromonas asaccharolytica DSM 20707] gi|332177899|gb|AEE13589.1| Glutamate racemase [Porphyromonas asaccharolytica DSM 20707] Length = 281 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 26/235 (11%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++++ I +FDSG GGL +L+K++ +P+Y F+Y+ D+ PYG+ + + Sbjct: 2 QQIEGPIGVFDSGYGGLTILRKLQEQLPQYDFVYLGDNARSPYGSRSMRVVYQFTREAVE 61 Query: 70 DILDKYQPVLSVIACNTAFT-LIKDELRSTFPSM-------AFLGAV-PAIKQAAAYTQS 120 + D P L ++ACNTA ++ + P + LG + P ++ T + Sbjct: 62 RLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTGT 120 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE----- 175 + IL+T T+ SYV++ H ++ + ++ E + Sbjct: 121 KHVGILATEGTVSS-------ESYVTEIHKLYPDVTVVQEACPLWVPIVETGESDSPGAD 173 Query: 176 --IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++K +E + E + D I+L CTHYP+++ R+L + + + +A+ Sbjct: 174 FFVRKHLERLLAQDE--KIDTIILGCTHYPILMPKIRRLLTPTIKVVSQGELVAK 226 >gi|271963270|ref|YP_003337466.1| glutamate racemase [Streptosporangium roseum DSM 43021] gi|270506445|gb|ACZ84723.1| Glutamate racemase [Streptosporangium roseum DSM 43021] Length = 276 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 6/216 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q SI IFDSG+GGL V + + +P YVAD PYG ++ + + D L Sbjct: 6 QASIGIFDSGVGGLTVARAIIDQLPNESIFYVADTARQPYGPKSIAQVRAYALEVM-DHL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACN+A + + R + PA ++A T++G + ++ T AT+ Sbjct: 65 VEHDVKMLVIACNSASAAVLRDARERYDVPVVEVIQPAARRAVQATRNGRVGVIGTRATI 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + ++ + + L + A R+ E+ + +E+ + I G Sbjct: 125 ESMAYHD---AFAAAPDVMLTG--VAAPRLVEFVERGETMSEELIEVIRGYMGPVLRDGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYPL+ ++ V + ++D A+ Sbjct: 180 DTLILGCTHYPLLTAPISYVAGDGVTLVSSADETAK 215 >gi|256847951|ref|ZP_05553395.1| glutamate racemase [Lactobacillus coleohominis 101-4-CHN] gi|256715011|gb|EEU29988.1| glutamate racemase [Lactobacillus coleohominis 101-4-CHN] Length = 267 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 16/233 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V++ +R +P ++V D FPYG + Sbjct: 1 MDNRP--------IGVMDSGLGGLSVIRIIREQLPNESIVFVGDQGHFPYGVRTQENV-C 51 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L L Y + +IACNTA L+ P + +G + P + A A + Sbjct: 52 QLALNIGRYLMTYDIKMMIIACNTATAASLPTLQKELP-IPVIGVIKPGAEAALAQPKHA 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I + +T T++ IH + ++ + S VE G K E+ E Sbjct: 111 RIGVTATEGTIKAGAYPKTIHELNPDVTVIPKAAQPMVSVVEHNEVGTP-KAQEVVNEQL 169 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 F + + DV+VL CTH+P + L P V +D + + A+ +L Sbjct: 170 AIF---KKQPVDVLVLGCTHFPFLAKEISNLLPD-VKLVDPALETVKTAKQML 218 >gi|71902958|ref|YP_279761.1| glutamate racemase [Streptococcus pyogenes MGAS6180] gi|123640458|sp|Q48V50|MURI_STRPM RecName: Full=Glutamate racemase gi|71802053|gb|AAX71406.1| glutamate racemase [Streptococcus pyogenes MGAS6180] Length = 264 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 28/252 (11%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + + Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E+++ + LG V P A T G + ++ TP T Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190 + S + + I L++ + +V AC + I E I K+I + Sbjct: 121 ---VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVG 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246 + D +VL CTHYPL+ + + + V +D+ R LL N HQ V Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232 Query: 247 DHALFLSGKPDI 258 H F + P+I Sbjct: 233 KHRFFTTANPEI 244 >gi|7387915|sp|P56868|MURI_AQUPY RecName: Full=Glutamate racemase gi|6707573|gb|AAF25672.1|AF212972_1 glutamate racemase [Aquifex pyrophilus] Length = 254 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 9/212 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R + +Y+ D PYG + + + + DK Sbjct: 3 IGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ V+ACNTA + L+ F P +K+A +++ I ++ TPAT++ Sbjct: 63 VDII-VVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + + + EE + E EI +++ ++++ + D + Sbjct: 122 AYQRKLEE--GGADVFAKACPLFVPLAEE-----GLLEGEITRKVVEHYLKEFKGKIDTL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 +L CTHYPL+ ++ V+ +D+S++++ Sbjct: 175 ILGCTHYPLLKKEIKKFL-GDVEVVDSSEALS 205 >gi|330996365|ref|ZP_08320248.1| glutamate racemase [Paraprevotella xylaniphila YIT 11841] gi|329573223|gb|EGG54837.1| glutamate racemase [Paraprevotella xylaniphila YIT 11841] Length = 281 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 28/237 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L ++R LMP+Y ++Y+ D+ PYG + + + D Sbjct: 12 IGVFDSGYGGLTILHEIRQLMPQYDYLYLGDNARTPYGTRSFEVVYEFTREAVQKLFD-L 70 Query: 76 QPVLSVIACNTA------------FTLIKDELRSTF----PSMAFLGAVPAIKQAAAYTQ 119 L ++ACNTA ++ E R P+ +G + + Sbjct: 71 GCHLVILACNTASAKALKTIQQNDLPKMEGETRRVLGVIRPTAECIGQITHSRHVGILAT 130 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 SG IS S P +R+ Y + + LV + S +Y ++K Sbjct: 131 SGTISSGSYPLEIRKLYPDIAVSGEACPMWVPLVENYEYDSPGADYF---------VEKR 181 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 I G + K+ D I+L CTHYPL+++ + +P V + + +A + L R Sbjct: 182 I-GNLLRKD-PAIDTIILGCTHYPLLLNKILKYTPRNVRIVPQGEYVAYSLKDYLQR 236 >gi|255321691|ref|ZP_05362846.1| glutamate racemase [Campylobacter showae RM3277] gi|255301171|gb|EET80433.1| glutamate racemase [Campylobacter showae RM3277] Length = 327 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 18/229 (7%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK-- 62 N +K L+ I FDSGIGGL VL + F+Y AD+ PYG + + Sbjct: 8 NLTLDKDLK--IAFFDSGIGGLSVLAEALRRFSGAEFLYFADEDHVPYGTKSRAEIVRLS 65 Query: 63 --RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + FL S D V+ACNTA + ELR F S+ +G PA+K AA + Sbjct: 66 LDAVGFLVSRGADGV-----VVACNTATSAAISELRGAF-SVPVIGMEPAVKLAADSFGA 119 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +++TP T+ + L+ +C S+ L R+ E+A ++ ++ + Sbjct: 120 RPTLLIATPLTIAGEKLARLVGRL--ECETW---SLPL-PRLVEFAQDLEFDSPAVRAYL 173 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + E +R +VL CTH+ V R++ P V +D D R Sbjct: 174 REELAKFELERLGSLVLGCTHFNYFKDVLREILPSHVRIIDGIDGTLNR 222 >gi|288800322|ref|ZP_06405780.1| glutamate racemase [Prevotella sp. oral taxon 299 str. F0039] gi|288332535|gb|EFC71015.1| glutamate racemase [Prevotella sp. oral taxon 299 str. F0039] Length = 281 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 22/242 (9%) Query: 10 KKLQNSIL----IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----K 61 K QN+I +FDSG GGL +L+ R +P+Y++IY+ D+ PYG+ + + Sbjct: 2 KNEQNNIAGPIGVFDSGYGGLTILEAFRKELPQYNYIYLGDNARAPYGSRSFDVVYEFTR 61 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFT-LIKDELRSTFPSM-----AFLGAV-PAIKQA 114 + +M LF + L ++ CNTA ++ R P M LG + P ++ Sbjct: 62 QAVMKLF-----ELGCRLIILGCNTASAKALRTIQRHDLPQMDNSLRRVLGIIHPTVEVI 116 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 T + + IL+T T++ + I+ + VS + +E + + Sbjct: 117 GDLTHTNHVGILATEGTIKSNSYALEINKLHPDITVTGVSCPLWVPIIENNEADGEGADY 176 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +KK I+ I + D ++L CTHYPL++ ++ +P V + +A+ L Sbjct: 177 FVKKRID--TIMSLDSQIDTLILGCTHYPLLLPKIKKYTPKGVQVVAQGQYVAKSLANYL 234 Query: 235 PR 236 R Sbjct: 235 QR 236 >gi|168334522|ref|ZP_02692683.1| glutamate racemase [Epulopiscium sp. 'N.t. morphotype B'] Length = 267 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 14/204 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I IFDSG+GGL V++++ + +Y D PYGN + K Sbjct: 1 MDNRP--------IGIFDSGLGGLTVVKEVMKQLTNESIVYFGDTARVPYGNKSKSTVTK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + +L K + +IACNT + ELR FP + G V P + A+ T++G Sbjct: 53 FSAQIIRFLLSKDVKAI-IIACNTVNSNCAIELRELFPELMIEGVVGPGVIMASRATKNG 111 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ T T++ + + + I + + VE+ ++ + I + Sbjct: 112 RIGVIGTEGTVKSGRYAERLREIHPEYQIFSKACPLFVPLVEDGWTNTEVAKMVIATYLN 171 Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205 E D ++L CTHYP++ Sbjct: 172 ELLEED----IDTLILGCTHYPIL 191 >gi|304439446|ref|ZP_07399355.1| glutamate racemase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372042|gb|EFM25639.1| glutamate racemase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 267 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 12/234 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG+ VL+++ ++P+ +IY D PYG ++ F + +D+ Sbjct: 4 IGIFDSGVGGVSVLKELLKVLPDEEYIYYCDQKNLPYGEKTPGEIRNLTKTSF-NFIDRQ 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA + L++ F F I + T++ I I++T +T+ Sbjct: 63 NVDMVVIACNTATANAERYLKAIFGFPIFGIIRSGISEIVKATKNNKILIIATESTVENG 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDV 194 I S V + L VE+ +DE+ ++ ++E+ D Sbjct: 123 IYQEKIKSLVPNADVRAKGCSNLVRAVEDGHI-----DDELAVQVVKEYLEEYRDFEFDT 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDD 247 +VL CTH+PL ++ ++ +D +I A+ L ++ Q R F++ Sbjct: 178 LVLGCTHFPLARPAIEKV----LEEMDKEVTIVDPAKSLAETVSEFLQDRDFEN 227 >gi|21909798|ref|NP_664066.1| glutamate racemase [Streptococcus pyogenes MGAS315] gi|28896509|ref|NP_802859.1| glutamate racemase [Streptococcus pyogenes SSI-1] gi|25453114|sp|Q8K8I8|MURI_STRP3 RecName: Full=Glutamate racemase gi|21903983|gb|AAM78869.1| putative glutamate racemase [Streptococcus pyogenes MGAS315] gi|28811763|dbj|BAC64692.1| putative glutamate racemase [Streptococcus pyogenes SSI-1] Length = 264 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 28/252 (11%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + + Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E+++ + LG V P A T G + ++ TP T Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190 + S + + I L++ + +V AC + I E I K+I + Sbjct: 121 ---VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVG 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246 + D +VL CTHYPL+ + + + V +D+ R LL N HQ V Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232 Query: 247 DHALFLSGKPDI 258 H F + P+I Sbjct: 233 KHRFFTTANPEI 244 >gi|311069331|ref|YP_003974254.1| glutamate racemase [Bacillus atrophaeus 1942] gi|310869848|gb|ADP33323.1| glutamate racemase [Bacillus atrophaeus 1942] Length = 271 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 6/224 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIIRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTRELTQYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D ++ + +G + P + A T++ I ++ T Sbjct: 61 LNSHHIKMLVIACNTATAIALDAIKREV-DIPVVGVIQPGARTAIKVTKNQTIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + ++ + ++ +L VE + DEI +E + Sbjct: 120 TIKSGAYEEALVALNTELKVENLACPLLVPFVESGKF-LDKTADEI---VETSLHPLKNT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYP++ ++ V + + D AR +L Sbjct: 176 TIDTLILGCTHYPILKDAIQRYMGEHVKIISSGDETAREVSTIL 219 >gi|254231591|ref|ZP_04924918.1| glutamate racemase murI [Mycobacterium tuberculosis C] gi|124600650|gb|EAY59660.1| glutamate racemase murI [Mycobacterium tuberculosis C] Length = 236 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 101/221 (45%), Gaps = 6/221 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ + Sbjct: 10 VFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVGRGVK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACN+A + + R + +PA+++A A T++G I ++ T R T T Sbjct: 70 AL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGT----RATIT 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 S+ + ++++ V+ G+ ++ +G + D +VL Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVERGVTSGR-QVLGLAQGYLEPLQRAEVDTLVL 183 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 CTHYPL+ + + V + +++ A+ +L I+ Sbjct: 184 GCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEID 224 >gi|22537740|ref|NP_688591.1| glutamate racemase [Streptococcus agalactiae 2603V/R] gi|76787427|ref|YP_330218.1| glutamate racemase [Streptococcus agalactiae A909] gi|76799029|ref|ZP_00781224.1| glutamate racemase [Streptococcus agalactiae 18RS21] gi|77408489|ref|ZP_00785227.1| glutamate racemase [Streptococcus agalactiae COH1] gi|29839527|sp|Q8DY92|MURI_STRA5 RecName: Full=Glutamate racemase gi|123601417|sp|Q3JZT5|MURI_STRA1 RecName: Full=Glutamate racemase gi|22534630|gb|AAN00464.1|AE014264_19 glutamate racemase [Streptococcus agalactiae 2603V/R] gi|76562484|gb|ABA45068.1| glutamate racemase [Streptococcus agalactiae A909] gi|76585615|gb|EAO62178.1| glutamate racemase [Streptococcus agalactiae 18RS21] gi|77172931|gb|EAO76062.1| glutamate racemase [Streptococcus agalactiae COH1] Length = 264 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 14/254 (5%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++M +PE I++ D PYG +++ + + +L K + Sbjct: 9 LDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLTKNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNTA + E++ + LG + P A T G + I+ TP T++ Sbjct: 69 I-VIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNLGKVGIIGTPMTVKSDAY 126 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 I + + ++ VE ++ KK + GK D ++L Sbjct: 127 RQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKVVYETLSPLVGK-LDTLIL 181 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHALFLSGK 255 CTHYPL+ + + + V +D+ R LL IN + H + + Sbjct: 182 GCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHFYTTAS 241 Query: 256 P----DIAMRRLMQ 265 P +IA + L Q Sbjct: 242 PKGFKEIAEQWLSQ 255 >gi|323126640|gb|ADX23937.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 264 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 10/243 (4%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V++++ +P +Y+ D PYG +++ L +L K + Sbjct: 9 LDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIREYTWDLVRFLLTKNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E++ + LG + P A T G + ++ TP T+ Sbjct: 69 I-VFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIY 126 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 I + ++ VE +I+ KK + GK D +VL Sbjct: 127 RQKIQLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVL 181 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHALFLSGK 255 CTHYPL+ + + + V +D+ R LL IN + + H + + Sbjct: 182 GCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINGSRCQEKVKHHFYTTAS 241 Query: 256 PDI 258 P+I Sbjct: 242 PEI 244 >gi|16330377|ref|NP_441105.1| glutamate racemase [Synechocystis sp. PCC 6803] gi|2492985|sp|P73737|MURI_SYNY3 RecName: Full=Glutamate racemase gi|1652867|dbj|BAA17785.1| glutamate racemase [Synechocystis sp. PCC 6803] Length = 279 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 11/221 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I +FDSG+GGL VL+++ +P+ +Y D PYG + + + + + + Sbjct: 6 RSRIGVFDSGVGGLTVLRELYRQLPKESILYFGDTARLPYGKRSPQVILQYVREILT-WM 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + ++ACNT+ L + ++ F +M LG + P + AA Q I ++STPAT Sbjct: 65 AAEEVKMVIMACNTSSALALETVQQEF-NMPILGVILPGAR--AAVRQGRRIGVISTPAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190 + IH + ++ +E+ D E+ +++ Sbjct: 122 AASNAYRHAIHEITPDALVWQMACPEFVPLIEQNRL-----HDPYTLEVAKGYLQPLLDA 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 D +V CTHY + VF+Q+ P + +D + + + AR Sbjct: 177 DIDTLVFGCTHYRHLTPVFQQILPSHIRLVDPASHVVKAAR 217 >gi|332522432|ref|ZP_08398684.1| glutamate racemase [Streptococcus porcinus str. Jelinkova 176] gi|332313696|gb|EGJ26681.1| glutamate racemase [Streptococcus porcinus str. Jelinkova 176] Length = 264 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 26/250 (10%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V++++ +P + +Y+ D PYG +K+ L + ++ K + Sbjct: 9 LDSGVGGLTVVRELMRQLPYENIVYIGDSARAPYGPRPAEQIKEYTWELVNFLMTKNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E++ + LG + P A T +G + ++ TP T+ Sbjct: 69 I-VFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTNGRVGVIGTPMTV----- 121 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCFIEKEG 189 +S + + + A V AC +I+ KK + G Sbjct: 122 -------ISDIYRQKIQLLAPAVEVTSLACPKFVPIVESNEIQSSVAKKVVYETLAPLVG 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDD 247 K D +VL CTHYPL+ + + + V +D+ R LL IN+ + + Sbjct: 175 K-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINSGRYQEKVR 233 Query: 248 HALFLSGKPD 257 H + + P+ Sbjct: 234 HYFYTTASPE 243 >gi|33240493|ref|NP_875435.1| glutamate racemase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238021|gb|AAQ00088.1| Glutamate racemase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 267 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 18/226 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSGIGG VL+ ++ + IY+AD P+G + +++ + S L + Sbjct: 7 IFDSGIGGFTVLKSIQERHSSFRSIYLADTQRVPFGTKQPSEIRQ-IALEISKWLCRQNI 65 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RRTY 136 V+ACNT ++ D +++ F I + I IL+TP+T+ + Y Sbjct: 66 NAVVVACNTTNSVALDVVKNNVEVPVF----DLIGSTSELIHESRIGILATPSTVASKAY 121 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIEKEGKRTD 193 + ++ S S +L E+ I +I E++ I + + Sbjct: 122 SKEILSSKPF--------SFVLEEGCPEFVPMIERGQINSSEVRGAIVNHLEPLIKENVE 173 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRIN 238 IVL C+H+PL+ +F++L P + +D S ++A++ L+ P +N Sbjct: 174 AIVLGCSHFPLLKPIFKELMPSNIRLIDPSLNLAKKLDTLITPSVN 219 >gi|239917359|ref|YP_002956917.1| glutamate racemase [Micrococcus luteus NCTC 2665] gi|281414158|ref|ZP_06245900.1| glutamate racemase [Micrococcus luteus NCTC 2665] gi|239838566|gb|ACS30363.1| glutamate racemase [Micrococcus luteus NCTC 2665] Length = 310 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 16/220 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P +YV D PYG ++ + + +++ + Sbjct: 14 IGVFDSGVGGLTVARAIMDQLPHESILYVGDTEHSPYGPRPIAEVRALALAIMDELVARG 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 L VIACN+A + + R + + + PA+++A A T++G I ++ T AT Sbjct: 74 VKAL-VIACNSASAAVLRDARERYTGGHGIPVIEVIQPAVRRAVAATRTGRIGVIGTEAT 132 Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKE 188 + R Y S+ + H+ ++S+ VE GI + E +E Sbjct: 133 VGSRAYED----SFSAAPHL-AITSVACPRFVEFVEAGITTGPELLETAREYTAPL---R 184 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYPL+ + V + +++ A+ Sbjct: 185 AAGVDTLVLGCTHYPLLTGALSLVMGEDVTLVSSAEETAK 224 >gi|322411173|gb|EFY02081.1| glutamate racemase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 264 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 10/243 (4%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V++++ +P +Y+ D PYG +++ L +L K + Sbjct: 9 LDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIREYTWDLVRFLLTKNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E++ + LG + P A T G + ++ TP T+ Sbjct: 69 I-VFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIY 126 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 I + ++ VE +I+ KK + GK D +VL Sbjct: 127 RQKIQLLAPTVEVTSLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVL 181 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHALFLSGK 255 CTHYPL+ + + + V +D+ R LL IN + + H + + Sbjct: 182 GCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINGSRCQEKVKHHFYTTAS 241 Query: 256 PDI 258 P+I Sbjct: 242 PEI 244 >gi|256375157|ref|YP_003098817.1| glutamate racemase [Actinosynnema mirum DSM 43827] gi|255919460|gb|ACU34971.1| glutamate racemase [Actinosynnema mirum DSM 43827] Length = 264 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 19/243 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P YV D PYG ++K + L ++ Sbjct: 8 IGIFDSGVGGLTVARAIMDQLPAERIRYVGDTANGPYGPLPIAQVRKHALDLADKLVADG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +L VIACNTA + R + +PA+++A A T+SG + ++ T +T+ Sbjct: 68 VKML-VIACNTASAACLRDARERYDVPVVEVVLPAVRRAVATTRSGRVGVIGTQSTI--- 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDV 194 TS + V+++ V+ G + I ++E + D Sbjct: 124 -TSGAYQDTFAAARDVQVTAVACPRFVDFVERGTTSGRQVLG--IAQAYLEPLQRADVDT 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHYPL+ V + + V + +++ + RV + F G Sbjct: 181 LVLGCTHYPLLTGVVQLVMGDGVTLVSSAEETVKDV-----------VRVLTERDQFREG 229 Query: 255 KPD 257 +PD Sbjct: 230 EPD 232 >gi|257884711|ref|ZP_05664364.1| glutamate racemase [Enterococcus faecium 1,231,501] gi|257820549|gb|EEV47697.1| glutamate racemase [Enterococcus faecium 1,231,501] Length = 277 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 19/238 (7%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 DN P I DSG+GGL V+++ +P + ++V D PYG + + Sbjct: 10 DNRP--------IGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQY 61 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122 + ++D+ +L VIACNTA + +E+++ S+ +G + P + A TQ+ Sbjct: 62 TWEMTDYLVDQGIKML-VIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQ 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEI 180 + I+ T T++ + V + + ++ S VE EY + KK + Sbjct: 120 VGIIGTIGTVKSRAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIV 173 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 K+ D ++L CTHYPL+ + + + V +D+ LL N Sbjct: 174 AETLAPLTTKKIDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFN 231 >gi|167764308|ref|ZP_02436435.1| hypothetical protein BACSTE_02693 [Bacteroides stercoris ATCC 43183] gi|167698424|gb|EDS15003.1| hypothetical protein BACSTE_02693 [Bacteroides stercoris ATCC 43183] Length = 279 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 9/227 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 12 IGVFDSGYGGLTILSKIREALPEYDYIYLGDNARAPYGTRSFEVVYEFTLQAVTKLFE-M 70 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ACNTA ++ ++L P+ LG + P ++ T+S + +L+T Sbjct: 71 GCHLVILACNTASAKALRSIQINDLPHLDPARRVLGVIRPTVECIGNITRSRHVGVLATG 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ IH + + + S VE + ++K I + Sbjct: 131 GTIKSESYPLEIHKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFVRKYINELLAKD-- 188 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + D +L CTHYP+++ R+ P + + +A + L R Sbjct: 189 REIDTAILGCTHYPILLPKIRKYMPESITIVSQGKLVADSLKDYLHR 235 >gi|251781827|ref|YP_002996129.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390456|dbj|BAH80915.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 265 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 10/243 (4%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V++++ +P +Y+ D PYG +++ L +L K + Sbjct: 10 LDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIREYTWDLVRFLLTKNVKM 69 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E++ + LG + P A T G + ++ TP T+ Sbjct: 70 I-VFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIY 127 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 I + ++ VE +I+ KK + GK D +VL Sbjct: 128 RQKIQLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVL 182 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFLSGK 255 CTHYPL+ + + + V +D+ R LL + +R + H + + Sbjct: 183 GCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINGSRCQEKVKHHFYTTAS 242 Query: 256 PDI 258 P+I Sbjct: 243 PEI 245 >gi|160872350|ref|ZP_02062482.1| glutamate racemase [Rickettsiella grylli] gi|159121149|gb|EDP46487.1| glutamate racemase [Rickettsiella grylli] Length = 271 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 11/223 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + L+P IY D P+G+ A++ + + D+L K Sbjct: 8 IGIFDSGMGGLTVAHAVTKLLPNESIIYFGDTAHAPWGDKSAAAIQAYSIKI-CDMLIKQ 66 Query: 76 QPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +IACN+ A+ L+K+ L M P I A Y I ++ T T Sbjct: 67 NCKLILIACNSASAVAYELVKEYL--GHKRMVVDVIDPMIDHLARYYVDKTIGLIGTKQT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + ++ +++ +L +EE I D IK ++ E + Sbjct: 125 INSNIYKKKLDELGINIQLNTLATPLLVPLIEEGFMDQTIMSDAIKTYLK----ESSLRN 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D +VL CTHYPLI ++ +D++D +A + L Sbjct: 181 LDALVLGCTHYPLIKQQIKRFYGDSTTIVDSTDIVAEAVKSRL 223 >gi|323342863|ref|ZP_08083095.1| glutamate racemase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463975|gb|EFY09169.1| glutamate racemase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 252 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 88/206 (42%), Gaps = 31/206 (15%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWED--------HALKKRLMFLFS 69 IFDSG+GG V Q ++ + + AD PYGN D HA+K F Sbjct: 12 IFDSGLGGYSVYQYLKQHLDPVSLVLYADQKNAPYGNQSDDAIIAYTLHAMK---WFQDH 68 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 DI D VIACNT + R+ FP M +G + + I+ST Sbjct: 69 DIRD------VVIACNTVSAVALSTARNHFPDMNLIGIIELTVGQIEPNADTCVGIVSTL 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK---EDEIKKEIEGCFIE 186 AT N IH H+ ++ L + +E +K+ E+E+K +E Sbjct: 123 ATFNAHAYRNFIHEK-GPIHVKELALPELVNIIEGLNQNLKLDTYLENELKPILES---- 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQL 212 TD+I L CTHYPL+ FR++ Sbjct: 178 -----TDLI-LGCTHYPLVHDAFRKI 197 >gi|227494818|ref|ZP_03925134.1| glutamate racemase [Actinomyces coleocanis DSM 15436] gi|226831270|gb|EEH63653.1| glutamate racemase [Actinomyces coleocanis DSM 15436] Length = 272 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 16/236 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ +YV D PYG +++ + + ++ + Sbjct: 6 IGIFDSGLGGLTVARSIMDKLPQEQILYVGDTAHTPYGTKPIATVRELALNVMDELASRG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L VIACNTA + + R + A + V PA K A A T++ I +++T AT Sbjct: 66 VKML-VIACNTASAAVLRDARERYEVDAGIPVVEVIQPASKAAVAATRNRKIGVIATAAT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEK-E 188 + TS + V+ VE GI + E+ +E +++ + Sbjct: 125 V----TSGAYKDAFAVVPDLEVTQQACPRFVEFVEKGITTGAELNEVARE----YLDPVK 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 D +VL CTHYPL+ + Q V + +S+S A L R N + V Sbjct: 177 TAGVDTLVLGCTHYPLLTGLISQHMGERVTLISSSESAANEVYQRLVRENLTASEV 232 >gi|15608478|ref|NP_215854.1| glutamate racemase [Mycobacterium tuberculosis H37Rv] gi|15840793|ref|NP_335830.1| glutamate racemase [Mycobacterium tuberculosis CDC1551] gi|31792534|ref|NP_855027.1| glutamate racemase [Mycobacterium bovis AF2122/97] gi|148661127|ref|YP_001282650.1| glutamate racemase [Mycobacterium tuberculosis H37Ra] gi|148822559|ref|YP_001287313.1| glutamate racemase [Mycobacterium tuberculosis F11] gi|167969085|ref|ZP_02551362.1| glutamate racemase [Mycobacterium tuberculosis H37Ra] gi|215403185|ref|ZP_03415366.1| glutamate racemase [Mycobacterium tuberculosis 02_1987] gi|215410983|ref|ZP_03419791.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A] gi|215426667|ref|ZP_03424586.1| glutamate racemase [Mycobacterium tuberculosis T92] gi|215430224|ref|ZP_03428143.1| glutamate racemase [Mycobacterium tuberculosis EAS054] gi|215445520|ref|ZP_03432272.1| glutamate racemase [Mycobacterium tuberculosis T85] gi|218753049|ref|ZP_03531845.1| glutamate racemase [Mycobacterium tuberculosis GM 1503] gi|219557241|ref|ZP_03536317.1| glutamate racemase [Mycobacterium tuberculosis T17] gi|253799614|ref|YP_003032615.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 1435] gi|254364235|ref|ZP_04980281.1| glutamate racemase murI [Mycobacterium tuberculosis str. Haarlem] gi|254550350|ref|ZP_05140797.1| glutamate racemase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186277|ref|ZP_05763751.1| glutamate racemase [Mycobacterium tuberculosis CPHL_A] gi|260200395|ref|ZP_05767886.1| glutamate racemase [Mycobacterium tuberculosis T46] gi|260204599|ref|ZP_05772090.1| glutamate racemase [Mycobacterium tuberculosis K85] gi|289442780|ref|ZP_06432524.1| glutamate racemase [Mycobacterium tuberculosis T46] gi|289446933|ref|ZP_06436677.1| glutamate racemase MurI [Mycobacterium tuberculosis CPHL_A] gi|289554870|ref|ZP_06444080.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 605] gi|289569351|ref|ZP_06449578.1| glutamate racemase MurI [Mycobacterium tuberculosis T17] gi|289574004|ref|ZP_06454231.1| glutamate racemase MurI [Mycobacterium tuberculosis K85] gi|289745090|ref|ZP_06504468.1| glutamate racemase MurI [Mycobacterium tuberculosis 02_1987] gi|289749894|ref|ZP_06509272.1| glutamate racemase MurI [Mycobacterium tuberculosis T92] gi|289753420|ref|ZP_06512798.1| glutamate racemase MurI [Mycobacterium tuberculosis EAS054] gi|289757443|ref|ZP_06516821.1| glutamate racemase [Mycobacterium tuberculosis T85] gi|289761499|ref|ZP_06520877.1| glutamate racemase MurI [Mycobacterium tuberculosis GM 1503] gi|294994896|ref|ZP_06800587.1| glutamate racemase [Mycobacterium tuberculosis 210] gi|297633891|ref|ZP_06951671.1| glutamate racemase [Mycobacterium tuberculosis KZN 4207] gi|297730879|ref|ZP_06959997.1| glutamate racemase [Mycobacterium tuberculosis KZN R506] gi|298524845|ref|ZP_07012254.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A] gi|306775517|ref|ZP_07413854.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu001] gi|306780667|ref|ZP_07419004.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu002] gi|306784068|ref|ZP_07422390.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu003] gi|306788429|ref|ZP_07426751.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu004] gi|306792758|ref|ZP_07431060.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu005] gi|306797162|ref|ZP_07435464.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu006] gi|306803041|ref|ZP_07439709.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu008] gi|306807235|ref|ZP_07443903.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu007] gi|306967432|ref|ZP_07480093.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu009] gi|306971625|ref|ZP_07484286.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu010] gi|307079337|ref|ZP_07488507.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu011] gi|307083902|ref|ZP_07493015.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu012] gi|313658212|ref|ZP_07815092.1| glutamate racemase [Mycobacterium tuberculosis KZN V2475] gi|54037866|sp|P63636|MURI_MYCBO RecName: Full=Glutamate racemase gi|54041259|sp|P63635|MURI_MYCTU RecName: Full=Glutamate racemase gi|166231043|sp|A5U238|MURI_MYCTA RecName: Full=Glutamate racemase gi|1340104|emb|CAA98102.1| PROBABLE GLUTAMATE RACEMASE MURI [Mycobacterium tuberculosis H37Rv] gi|13880988|gb|AAK45644.1| glutamate racemase [Mycobacterium tuberculosis CDC1551] gi|31618123|emb|CAD94234.1| PROBABLE GLUTAMATE RACEMASE MURI [Mycobacterium bovis AF2122/97] gi|134149749|gb|EBA41794.1| glutamate racemase murI [Mycobacterium tuberculosis str. Haarlem] gi|148505279|gb|ABQ73088.1| glutamate racemase [Mycobacterium tuberculosis H37Ra] gi|148721086|gb|ABR05711.1| glutamate racemase murI [Mycobacterium tuberculosis F11] gi|253321117|gb|ACT25720.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 1435] gi|289415699|gb|EFD12939.1| glutamate racemase [Mycobacterium tuberculosis T46] gi|289419891|gb|EFD17092.1| glutamate racemase MurI [Mycobacterium tuberculosis CPHL_A] gi|289439502|gb|EFD21995.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 605] gi|289538435|gb|EFD43013.1| glutamate racemase MurI [Mycobacterium tuberculosis K85] gi|289543105|gb|EFD46753.1| glutamate racemase MurI [Mycobacterium tuberculosis T17] gi|289685618|gb|EFD53106.1| glutamate racemase MurI [Mycobacterium tuberculosis 02_1987] gi|289690481|gb|EFD57910.1| glutamate racemase MurI [Mycobacterium tuberculosis T92] gi|289694007|gb|EFD61436.1| glutamate racemase MurI [Mycobacterium tuberculosis EAS054] gi|289709005|gb|EFD73021.1| glutamate racemase MurI [Mycobacterium tuberculosis GM 1503] gi|289713007|gb|EFD77019.1| glutamate racemase [Mycobacterium tuberculosis T85] gi|298494639|gb|EFI29933.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A] gi|308215989|gb|EFO75388.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu001] gi|308326496|gb|EFP15347.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu002] gi|308331137|gb|EFP19988.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu003] gi|308334978|gb|EFP23829.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu004] gi|308338784|gb|EFP27635.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu005] gi|308342425|gb|EFP31276.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu006] gi|308346336|gb|EFP35187.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu007] gi|308350259|gb|EFP39110.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu008] gi|308354908|gb|EFP43759.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu009] gi|308358852|gb|EFP47703.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu010] gi|308362789|gb|EFP51640.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu011] gi|308366436|gb|EFP55287.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu012] gi|323720155|gb|EGB29258.1| glutamate racemase murI [Mycobacterium tuberculosis CDC1551A] gi|326902961|gb|EGE49894.1| glutamate racemase murI [Mycobacterium tuberculosis W-148] gi|328459360|gb|AEB04783.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 4207] Length = 271 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 13/236 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ + Sbjct: 10 VFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVGRGVK 69 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACN+A + + R + +PA+++A A T++G I ++ T R T T Sbjct: 70 AL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGT----RATIT 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 S+ + ++++ V+ G+ ++ +G + D +VL Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVERGVT-SGRQVLGLAQGYLEPLQRAEVDTLVL 183 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-------THQTRVFD 246 CTHYPL+ + + V + +++ A+ +L I+ TR+F+ Sbjct: 184 GCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFE 239 >gi|293554039|ref|ZP_06674639.1| glutamate racemase [Enterococcus faecium E1039] gi|291601821|gb|EFF32073.1| glutamate racemase [Enterococcus faecium E1039] Length = 277 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 11/223 (4%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++ +P + ++V D PYG + + + ++D+ + Sbjct: 17 IDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLVDQGIKM 76 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T++ Sbjct: 77 L-VIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSRAY 134 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + V + + ++ S VE EY + KK + K+ D + Sbjct: 135 EKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIVAETLAPLTTKKIDTL 188 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +L CTHYPL+ + + + V +D+ LL N Sbjct: 189 ILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFN 231 >gi|333029733|ref|ZP_08457794.1| Glutamate racemase [Bacteroides coprosuis DSM 18011] gi|332740330|gb|EGJ70812.1| Glutamate racemase [Bacteroides coprosuis DSM 18011] Length = 279 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 9/232 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I +FDSG GGL +L+K+R +PEY +IY+ D+ PYG + K + Sbjct: 6 KRPGPIGVFDSGYGGLTILEKIRKKLPEYDYIYLGDNARAPYGTRSFELVYKFTLQAVKH 65 Query: 71 ILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124 + ++ L ++ACNTA ++ +++L P LG + P ++ T S I Sbjct: 66 LFEE-GCHLVILACNTASAKALRSIQQNDLPLLDPQRRVLGVIRPTVESINELTISNHIG 124 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +++T T++ + + + + VE + +K+ I+ Sbjct: 125 VVATLGTIKSESYPLELAKLFPHIKVSGEACPMWVPLVENNEFDTPGADYFVKQSIDNLL 184 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++ D I+L CTHYPL+ Q P + + +A+ + L R Sbjct: 185 --QQDSDIDTILLGCTHYPLLQSKIEQFVPNNIKVIAQGQYVAKSLQNYLER 234 >gi|69246346|ref|ZP_00603902.1| Glutamate racemase [Enterococcus faecium DO] gi|257878166|ref|ZP_05657819.1| glutamate racemase [Enterococcus faecium 1,230,933] gi|257881050|ref|ZP_05660703.1| glutamate racemase [Enterococcus faecium 1,231,502] gi|257889635|ref|ZP_05669288.1| glutamate racemase [Enterococcus faecium 1,231,410] gi|257892425|ref|ZP_05672078.1| glutamate racemase [Enterococcus faecium 1,231,408] gi|258616328|ref|ZP_05714098.1| glutamate racemase [Enterococcus faecium DO] gi|289565821|ref|ZP_06446263.1| glutamate racemase [Enterococcus faecium D344SRF] gi|293563127|ref|ZP_06677592.1| glutamate racemase [Enterococcus faecium E1162] gi|293569788|ref|ZP_06680875.1| glutamate racemase [Enterococcus faecium E1071] gi|294614005|ref|ZP_06693935.1| glutamate racemase [Enterococcus faecium E1636] gi|294617100|ref|ZP_06696766.1| glutamate racemase [Enterococcus faecium E1679] gi|294623311|ref|ZP_06702173.1| glutamate racemase [Enterococcus faecium U0317] gi|68195299|gb|EAN09750.1| Glutamate racemase [Enterococcus faecium DO] gi|257812394|gb|EEV41152.1| glutamate racemase [Enterococcus faecium 1,230,933] gi|257816708|gb|EEV44036.1| glutamate racemase [Enterococcus faecium 1,231,502] gi|257825995|gb|EEV52621.1| glutamate racemase [Enterococcus faecium 1,231,410] gi|257828804|gb|EEV55411.1| glutamate racemase [Enterococcus faecium 1,231,408] gi|289162364|gb|EFD10222.1| glutamate racemase [Enterococcus faecium D344SRF] gi|291587536|gb|EFF19413.1| glutamate racemase [Enterococcus faecium E1071] gi|291593112|gb|EFF24691.1| glutamate racemase [Enterococcus faecium E1636] gi|291596637|gb|EFF27864.1| glutamate racemase [Enterococcus faecium E1679] gi|291597279|gb|EFF28468.1| glutamate racemase [Enterococcus faecium U0317] gi|291604905|gb|EFF34374.1| glutamate racemase [Enterococcus faecium E1162] Length = 277 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 19/238 (7%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 DN P I DSG+GGL V+++ +P + ++V D PYG + + Sbjct: 10 DNRP--------IGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQ 60 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122 + +D L + + VIACNTA + +E+++ S+ +G + P + A TQ+ Sbjct: 61 YTWEMTDYLVEQGIKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQ 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEI 180 + I+ T T++ + V + + ++ S VE EY + KK + Sbjct: 120 VGIIGTIGTVKSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIV 173 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 K+ D ++L CTHYPL+ + + + V +D+ LL N Sbjct: 174 AETLAPLTTKKIDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFN 231 >gi|269218711|ref|ZP_06162565.1| glutamate racemase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211822|gb|EEZ78162.1| glutamate racemase [Actinomyces sp. oral taxon 848 str. F0332] Length = 275 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 10/217 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + PE Y+ D PYG +++ + + ++D Sbjct: 6 IGIFDSGVGGLTVARAIIDQFPEESITYIGDTAHTPYGPKPIAQVRELALDIMDSLVDSG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L VIACN+A + + R + + + V PA+++A + T++ I ++ T AT Sbjct: 66 VKML-VIACNSASAAVLHDARERYQAARSIPVVEVIQPAVRRAVSATRNRRIGVIGTEAT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + ++ + H+ L ++ VE GI ++++ E Sbjct: 125 IGSGAYED---AFAAAPHLTLTTAA-CPEFVELVEAGITAGP-QVEEVAERYLAPVRDAG 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYPL+ V + ++D AR Sbjct: 180 VDTLVLGCTHYPLLAGAIGYTMGESVTLVSSADETAR 216 >gi|288801916|ref|ZP_06407358.1| glutamate racemase [Prevotella melaninogenica D18] gi|288335958|gb|EFC74391.1| glutamate racemase [Prevotella melaninogenica D18] Length = 279 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMF 66 K I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + ++ +M Sbjct: 6 KQPGPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVMK 65 Query: 67 LFSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 LF + L ++ CNTA T+ +++L + P LG + P + T S Sbjct: 66 LF-----ELGCQLVILGCNTASAKALRTIQQNDLPNLDPDRRVLGVIRPTAEVIGKLTHS 120 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L+T T++ + I + V + +E + +KK I Sbjct: 121 RHVGVLATEGTIKSDSYNLEIQKLWGDVKVTGVPCPLWVPIIENNEADSPGADYFVKKRI 180 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIV 206 + I + D ++L CTHYP+++ Sbjct: 181 D--HIMRLDPEIDTLILGCTHYPILM 204 >gi|325068394|ref|ZP_08127067.1| glutamate racemase [Actinomyces oris K20] Length = 287 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 12/216 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P+ +Y+ D PYG + ++ + + +++D+ Sbjct: 1 MFDSGVGGLTVARSVLDQLPQEQVLYIGDTANSPYGPRDIAEVRSLALGIMDELVDRGVK 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPATL- 132 +L VIACNTA + + R + + + PA + AA T++G + +++T T+ Sbjct: 61 LL-VIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGTVD 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R Y L + + LVS R E A E+ E + Sbjct: 120 SRAYDDAL----QAVPGVELVSQAC--PRFVELAERGVTTGPEVLDVAEEYLAPIKAAGV 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYPL+V + V + +SD A+ Sbjct: 174 DTLILGCTHYPLLVGPISYVMGRDVTLVTSSDETAK 209 >gi|257887546|ref|ZP_05667199.1| glutamate racemase [Enterococcus faecium 1,141,733] gi|257896041|ref|ZP_05675694.1| glutamate racemase [Enterococcus faecium Com12] gi|293378787|ref|ZP_06624944.1| glutamate racemase [Enterococcus faecium PC4.1] gi|257823600|gb|EEV50532.1| glutamate racemase [Enterococcus faecium 1,141,733] gi|257832606|gb|EEV59027.1| glutamate racemase [Enterococcus faecium Com12] gi|292642580|gb|EFF60733.1| glutamate racemase [Enterococcus faecium PC4.1] Length = 281 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 19/238 (7%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 DN P I DSG+GGL V+++ +P + ++V D PYG + + Sbjct: 10 DNRP--------IGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQ 60 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122 + +D L + + VIACNTA + +E+++ S+ +G + P + A TQ+ Sbjct: 61 YTWEMTDYLVEQGIKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQ 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEI 180 + I+ T T++ + V + + ++ S VE EY + KK + Sbjct: 120 VGIIGTIGTVKSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIV 173 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 K+ D ++L CTHYPL+ + + + V +D+ LL N Sbjct: 174 AETLAPLTTKKIDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFN 231 >gi|227551339|ref|ZP_03981388.1| glutamate racemase [Enterococcus faecium TX1330] gi|227179550|gb|EEI60522.1| glutamate racemase [Enterococcus faecium TX1330] Length = 277 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 11/223 (4%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++ +P + ++V D PYG + + + +D L + Sbjct: 13 IDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQYTWEMTDYLVEQGIK 71 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T++ Sbjct: 72 MLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAY 130 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + V + + ++ S VE EY + KK + K+ D + Sbjct: 131 EKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIVAETLAPLTTKKIDTL 184 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +L CTHYPL+ + + + V +D+ LL N Sbjct: 185 ILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFN 227 >gi|113474067|ref|YP_720128.1| glutamate racemase [Trichodesmium erythraeum IMS101] gi|122965316|sp|Q11A19|MURI_TRIEI RecName: Full=Glutamate racemase gi|110165115|gb|ABG49655.1| glutamate racemase [Trichodesmium erythraeum IMS101] Length = 270 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 27/268 (10%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI- 71 Q I IFDSGIGGL VL+++ +P+ +Y AD PYG ++ L F+ I Sbjct: 7 QKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGT---RTTEEILQFVDEIIT 63 Query: 72 -LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFL--GAVPAIKQAAAYTQSGLISIL 126 L K + ++ACNT+ L ++++S F P + + GA A+KQ I ++ Sbjct: 64 WLVKSGVKMVLMACNTSSALALEKVKSKFDVPILGLIVPGANTAVKQGKR------IGVI 117 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC----GIKIKEDEIKKEIEG 182 +TPAT I + + V +E+ +I E+ + I+ Sbjct: 118 ATPATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHDPYTYQIAEEYLMPLIQ- 176 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 ++ D +V CTHYP + + R L P V ++D + S+ + L +N Sbjct: 177 -------QQIDTLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLEND 229 Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFGLK 270 + +S P +Q G K Sbjct: 230 KTPKPTKFVVSSSPQKFADLSLQLLGYK 257 >gi|329766985|ref|ZP_08258513.1| glutamate racemase [Gemella haemolysans M341] gi|328837710|gb|EGF87335.1| glutamate racemase [Gemella haemolysans M341] Length = 264 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 25/253 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + N+I +FDSG+GGL V +++ +P Y D PYG+ + K + Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTREEIIKYTDRAVKYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +DK ++ V+ACNTA + L+ + + +G V P ++A T++ + +L T Sbjct: 61 IDKGVKMV-VLACNTATAAALNYLQDKY-DIPIIGVVQPGARRAIQATENNKVLVLGTKF 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---------KIKEDEIKKEIE 181 T + S V I ++S I +V + AC + +D KK I Sbjct: 119 TAK---------SKVYDIEIENINSDI---QVVDKACPAFVPFIESEGNVDKDATKKIIH 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 D +VL CTHYP++ + + + + AR +L HQ Sbjct: 167 ETLENTRNLGVDTVVLGCTHYPILKKDIEEYYGNNIKVISSGREAAREVSSVLGYAKLHQ 226 Query: 242 TRVF-DDHALFLS 253 R DH ++S Sbjct: 227 KRFNKKDHEFYIS 239 >gi|302346059|ref|YP_003814412.1| glutamate racemase [Prevotella melaninogenica ATCC 25845] gi|302149137|gb|ADK95399.1| glutamate racemase [Prevotella melaninogenica ATCC 25845] Length = 279 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMF 66 K I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + ++ +M Sbjct: 6 KQPGPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVMK 65 Query: 67 LFSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 LF L ++ CNTA T+ +++L + P LG + P + T+S Sbjct: 66 LFD-----LGCQLVILGCNTASAKALRTIQQNDLPNLDPDRRVLGVIRPTAEVIGKLTRS 120 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L+T T++ + I + V + +E + +KK I Sbjct: 121 RHVGVLATEGTIKSDSYNLEIQKLWEDVKVTGVPCPLWVPIIENNEADSPGADYFVKKRI 180 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIV 206 + I + D ++L CTHYP+++ Sbjct: 181 D--HIMRLDPEIDTLILGCTHYPILM 204 >gi|118470579|ref|YP_889158.1| glutamate racemase [Mycobacterium smegmatis str. MC2 155] gi|166231042|sp|A0R1X0|MURI_MYCS2 RecName: Full=Glutamate racemase gi|118171866|gb|ABK72762.1| glutamate racemase [Mycobacterium smegmatis str. MC2 155] Length = 277 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 7/191 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ + Sbjct: 8 IGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHSLAIGDDLVSRG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L VIACNTA + + R + + + + PA+++A A T++G I ++ T AT+ Sbjct: 68 VKAL-VIACNTASSACLRDARERYSPVPVVEVILPAVRRAVAATRNGRIGVIGTQATI-- 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 S + V ++ V+ G+ ++ EG + D Sbjct: 125 --ASGAYQDAFAAARDTEVFTVACPRFVDFVERGVTSGR-QVLGLAEGYLEPLQLAEVDT 181 Query: 195 IVLACTHYPLI 205 +VL CTHYP++ Sbjct: 182 LVLGCTHYPML 192 >gi|291541513|emb|CBL14623.1| glutamate racemase [Ruminococcus bromii L2-63] Length = 272 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 36/262 (13%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q++I +FDSG+GGL +++ ++P IY D PYGN + K + ++ L Sbjct: 4 QDAIGVFDSGLGGLSAVKEFLHVLPNEKIIYFGDTGRVPYGNRSRETISKYAL-QDANFL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K+ V AC T ++ D L S+ + G V P A T++G I I+ T AT Sbjct: 63 LKHNVKTVVAACGTVSSVAGDMLEEKL-SVPYTGVVNPTAFIADQKTKNGKIGIIGTAAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC---------GIKIKEDEIKKEIEG 182 + HSY + + + +V E AC G ++D+I + + Sbjct: 122 ISS-------HSYKLR-----LEKLNPKYKVYEQACPLFVPLVENGFICRDDQIVRLVIR 169 Query: 183 CFI-EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA------RRARCLLP 235 ++ E + D ++L CTHYPL+ V +D+ A R LL Sbjct: 170 RYLSELKETGVDTLILGCTHYPLLRDAIADFMGDGVTLVDSGYETAIYCSKILRENNLLN 229 Query: 236 RINTHQTRVFDDHALFLSGKPD 257 HQT F ++S PD Sbjct: 230 TDGVHQTPEF-----YVSDTPD 246 >gi|319942509|ref|ZP_08016819.1| hypothetical protein HMPREF9464_02038 [Sutterella wadsworthensis 3_1_45B] gi|319803912|gb|EFW00830.1| hypothetical protein HMPREF9464_02038 [Sutterella wadsworthensis 3_1_45B] Length = 271 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 16/208 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I I DSG GGL V + +R +P ++ AD PYG+ ++ RL + S +L + Sbjct: 7 IGILDSGFGGLSVARAIRAAIPNEDLVFAADCAYAPYGDNSSEYIQARLEHVVSFLLAQQ 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V ACNTA + R+ SM +G PA+ A +T++G I +L+T T+ Sbjct: 67 VKAL-VFACNTATAVGIRAFRARL-SMPIIGIEPAVFPALRHTRTGHIGVLATCRTIESQ 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-------- 187 +++ H + + S + V + C + E + + + + + Sbjct: 125 KYADVRHRAIEWAEV----SRPMPVTVWDVPCP-GLMECVERGDFDSANVHELLVRYVDP 179 Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSP 214 D IVL CTHYP + + + +P Sbjct: 180 LTAHNVDEIVLGCTHYPFLANAIAKHAP 207 >gi|302384966|ref|YP_003820788.1| glutamate racemase [Clostridium saccharolyticum WM1] gi|302195594|gb|ADL03165.1| glutamate racemase [Clostridium saccharolyticum WM1] Length = 272 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 24/212 (11%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 + I +FDSG+GGL V +++ MP+ +Y D PYG+ + ++ + FL Sbjct: 5 NSPIGVFDSGVGGLTVAREIMRQMPDERIVYFGDTARVPYGSKSCSTVIRFTRQIIRFLL 64 Query: 69 SDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + + VIACNT A ++ E+ + GA + A T++G I Sbjct: 65 TQDVKAI-----VIACNTATACALEAVEKEVEIPIVGVIHAGA----RTAVDSTKNGKIG 115 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 I+ T T+R + ++ + +L VEE + D + EI + Sbjct: 116 IIGTEGTIRSGVYTRVMKEMREDIDVTGKPCPLLVPLVEE-----GLLHDSVTDEIASRY 170 Query: 185 I-EKEGKRTDVIVLACTHYPLI-VHVFRQLSP 214 + E +GK D +VL CTHYPL+ V R + P Sbjct: 171 LSELKGKYIDTLVLGCTHYPLLRSTVGRLMGP 202 >gi|260559213|ref|ZP_05831399.1| glutamate racemase [Enterococcus faecium C68] gi|261207746|ref|ZP_05922431.1| glutamate racemase [Enterococcus faecium TC 6] gi|314939892|ref|ZP_07847098.1| glutamate racemase [Enterococcus faecium TX0133a04] gi|314943739|ref|ZP_07850478.1| glutamate racemase [Enterococcus faecium TX0133C] gi|314949695|ref|ZP_07853013.1| glutamate racemase [Enterococcus faecium TX0082] gi|314953241|ref|ZP_07856180.1| glutamate racemase [Enterococcus faecium TX0133A] gi|314993679|ref|ZP_07859027.1| glutamate racemase [Enterococcus faecium TX0133B] gi|314997404|ref|ZP_07862355.1| glutamate racemase [Enterococcus faecium TX0133a01] gi|260074970|gb|EEW63286.1| glutamate racemase [Enterococcus faecium C68] gi|260078129|gb|EEW65835.1| glutamate racemase [Enterococcus faecium TC 6] gi|313588539|gb|EFR67384.1| glutamate racemase [Enterococcus faecium TX0133a01] gi|313591853|gb|EFR70698.1| glutamate racemase [Enterococcus faecium TX0133B] gi|313594707|gb|EFR73552.1| glutamate racemase [Enterococcus faecium TX0133A] gi|313597602|gb|EFR76447.1| glutamate racemase [Enterococcus faecium TX0133C] gi|313640855|gb|EFS05435.1| glutamate racemase [Enterococcus faecium TX0133a04] gi|313643953|gb|EFS08533.1| glutamate racemase [Enterococcus faecium TX0082] Length = 273 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 11/223 (4%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++ +P + ++V D PYG + + + +D L + Sbjct: 13 IDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQYTWEMTDYLVEQGIK 71 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T++ Sbjct: 72 MLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAY 130 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + V + + ++ S VE EY + KK + K+ D + Sbjct: 131 EKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIVAETLAPLTTKKIDTL 184 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +L CTHYPL+ + + + V +D+ LL N Sbjct: 185 ILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFN 227 >gi|229108454|ref|ZP_04238071.1| Glutamate racemase [Bacillus cereus Rock1-15] gi|228675081|gb|EEL30308.1| Glutamate racemase [Bacillus cereus Rock1-15] Length = 265 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 103/240 (42%), Gaps = 11/240 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA EL+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 60 KTLVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRTDV 194 +H + +H + LA+ VE ED + ++++ + + D Sbjct: 119 YEKALHELDTYLEVHSYACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDIDT 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYPL+ ++ + + +++ A +L + H F +G Sbjct: 173 LILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 232 >gi|151567725|pdb|2JFU|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate Racemase In Complex With Phosphate gi|151567726|pdb|2JFV|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate Racemase In Complex With Citrate gi|151567727|pdb|2JFW|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate Racemase In Complex With Tartrate Length = 291 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 19/238 (7%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 DN P I DSG+GGL V+++ +P + ++V D PYG + + Sbjct: 24 DNRP--------IGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQ 74 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122 + +D L + + VIACNTA + +E+++ S+ +G + P + A TQ+ Sbjct: 75 YTWEMTDYLVEQGIKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQ 133 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEI 180 + I+ T T++ + V + + ++ S VE EY + KK + Sbjct: 134 VGIIGTIGTVKSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIV 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 K+ D ++L CTHYPL+ + + + V +D+ LL N Sbjct: 188 AETLAPLTTKKIDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFN 245 >gi|78779002|ref|YP_397114.1| glutamate racemase [Prochlorococcus marinus str. MIT 9312] gi|78712501|gb|ABB49678.1| glutamate racemase [Prochlorococcus marinus str. MIT 9312] Length = 264 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 124/265 (46%), Gaps = 29/265 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWEDHALKKRLMFLFSDILD 73 I IFDSGIGG +L + + Y+AD P+G N+E+ L + + F + D Sbjct: 5 IGIFDSGIGGFTILNSLLKTRNDVEVFYLADTKRIPFGDKNFEEIRLIAKEICNFFE--D 62 Query: 74 KYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 K L +IACNT A +++++L+ P + +V I +I IL+T Sbjct: 63 KNLDAL-LIACNTTNACALDILENDLK--IPCFDLINSVSEI------VNKQIIGILATK 113 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI-KIKEDEIK-KEIEGCFIEK 187 T+R +Y N I S +S I + E+ I + K D IK + +++ Sbjct: 114 TTVRSSYYKNAISSKKE-------NSKIFQNECPEFVSEIEREKLDFIKLNNLSDLYLKP 166 Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR--ARCLLPRINTHQTRV 244 K + I+L C+HYPLI R+ + +D S+++ ++ +P+ + +++ Sbjct: 167 LLNKNIEEIILGCSHYPLIYEFLRKKISSNIKIIDPSEALIKKFNESFAIPKTDRYESLS 226 Query: 245 FDDHALFLSGKPDIAMRRLMQGFGL 269 F++ F++ + D +++ G+ Sbjct: 227 FENVKFFVTSERDKFSKKVKFWLGI 251 >gi|257898669|ref|ZP_05678322.1| glutamate racemase [Enterococcus faecium Com15] gi|257836581|gb|EEV61655.1| glutamate racemase [Enterococcus faecium Com15] Length = 273 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 11/223 (4%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++ +P + ++V D PYG + + + +D L + Sbjct: 13 IDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQYTWEMTDYLVEQGIK 71 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T++ Sbjct: 72 MLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAY 130 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + V + + ++ S VE EY + KK + K+ D + Sbjct: 131 EKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIVAETLAPLTTKKIDTL 184 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +L CTHYPL+ + + + V +D+ LL N Sbjct: 185 ILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFN 227 >gi|21903447|sp|Q9XDZ7|MURI_CORGL RecName: Full=Glutamate racemase Length = 273 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 6/195 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++ Sbjct: 13 IGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADELVERG 72 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ VIACNTA + R + +PA+++A A T++G + ++ T T+ Sbjct: 73 CKMI-VIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTINSG 131 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L + S +V + + R ++ +I + + + D + Sbjct: 132 AYQDLFSASPS-----IVVNAVACPRFVDFVERGITSGRQILNIAQDYLEPLQAEGVDTL 186 Query: 196 VLACTHYPLIVHVFR 210 VL CTHYPL+ V + Sbjct: 187 VLGCTHYPLLSGVIQ 201 >gi|20806735|ref|NP_621906.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4] gi|24418566|sp|Q8RD38|MURI1_THETN RecName: Full=Glutamate racemase 1 gi|20515192|gb|AAM23510.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4] Length = 266 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 24/231 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I I DSG+GG+ VL+++ ++PE +IY D + PYGN ++K + L K Sbjct: 7 IGIIDSGVGGITVLKRLLEILPEEDYIYFGDTLRVPYGNRPKEEIEK-FTREIVNYLKKQ 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNT + I ++ + + F IK A T +G I +++T T+ Sbjct: 66 KVKAVVIACNTICSSIN---KNDYEILMFGILEAGIKSAVEATSNGRIGVIATKRTVE-- 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKED------EIKKEIEGCFIEK 187 S+ ++ + + + V + AC + I E+ I ++ C E Sbjct: 121 ----------SEAYLKGIKRLNRNAMVFQKACPELVLIVENGFYEASSIYSAVKKCTEEF 170 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 K D +VL CTH+P+++ ++ V +D + +A + L N Sbjct: 171 LEKDIDTLVLGCTHFPILLPFIERVVDNKVTVVDPAIKLAHEVKKYLVENN 221 >gi|306836771|ref|ZP_07469732.1| glutamate racemase [Corynebacterium accolens ATCC 49726] gi|304567358|gb|EFM42962.1| glutamate racemase [Corynebacterium accolens ATCC 49726] Length = 259 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 24/230 (10%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V + + +P+ IY D PYG ++ + ++++ Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPQESVIYKGDTAHGPYGPRPISQVRAFSQDIADELVE 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + +L VIACNTA + R + + L + PA+++A + T++G I ++ T T+ Sbjct: 66 RGCKML-VIACNTATAAFLHDARERY-DIPILEVIRPAVRRAMSTTRNGKIGVIGTEGTI 123 Query: 133 RRTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +L + + + C + V I A R +I EG Sbjct: 124 KSGAYQDLFAVNPNVEAVAAACPDFVPFVERGITAGR-------------QILGVAEGYL 170 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + D +VL CTHYPL+ + + V + +S+ + LL Sbjct: 171 APLQAQGVDTLVLGCTHYPLLTGIIQLAMGENVSLVTSSEETTKDVMRLL 220 >gi|256544593|ref|ZP_05471965.1| glutamate racemase [Anaerococcus vaginalis ATCC 51170] gi|256399482|gb|EEU13087.1| glutamate racemase [Anaerococcus vaginalis ATCC 51170] Length = 249 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 21/223 (9%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70 +I +FDSG+GGL VL+++ +F Y+ D+ PYG+ + + KK + FL Sbjct: 3 NIGVFDSGLGGLTVLKELSKKHKANYF-YLGDNKNVPYGDKSNEEIIELSKKIVKFLLKK 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +D + VIACNT T+ + LR F AIK++ G I +++T A Sbjct: 62 DIDFF-----VIACNTISTVAIEYLRKEFDKKFISITDQAIKKSLEC--EGDIFVMATKA 114 Query: 131 T-LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T L+ TY + + S + + +L S +E+ GI +K D + K ++ Sbjct: 115 TCLQHTYKIKIEEN--SNKKVFEKACPLLVSLIEK---GI-VKGDVLDKALKDYLELANE 168 Query: 190 KRTDVIVLACTHYPLIV-HVFRQLSPWPVDWLDNSDSIARRAR 231 K+ + IVL CTHYP++ +F+ L+ + + +D ++ +A+ + Sbjct: 169 KKIENIVLGCTHYPIVEDEIFKNLN-YKANIIDPANVLAQNIK 210 >gi|19553709|ref|NP_601711.1| glutamate racemase [Corynebacterium glutamicum ATCC 13032] gi|62391349|ref|YP_226751.1| glutamate racemase [Corynebacterium glutamicum ATCC 13032] gi|21325280|dbj|BAB99902.1| Glutamate racemase [Corynebacterium glutamicum ATCC 13032] gi|41326690|emb|CAF21172.1| GLUTAMATE RACEMASE [Corynebacterium glutamicum ATCC 13032] Length = 284 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 6/195 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++ Sbjct: 24 IGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADELVERG 83 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ VIACNTA + R + +PA+++A A T++G + ++ T T+ Sbjct: 84 CKMI-VIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTINSG 142 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L + S +V + + R ++ +I + + + D + Sbjct: 143 AYQDLFSASPS-----IVVNAVACPRFVDFVERGITSGRQILNIAQDYLEPLQAEGVDTL 197 Query: 196 VLACTHYPLIVHVFR 210 VL CTHYPL+ V + Sbjct: 198 VLGCTHYPLLSGVIQ 212 >gi|326773725|ref|ZP_08233008.1| glutamate racemase [Actinomyces viscosus C505] gi|326636955|gb|EGE37858.1| glutamate racemase [Actinomyces viscosus C505] Length = 294 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 12/218 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++D+ Sbjct: 6 IGMFDSGVGGLTVARSVLDQLPHEQVLYIGDTANSPYGPRDIAEVRSLALGIMDELVDRG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L VIACNTA + + R + + + PA + AA T++G + +++T T Sbjct: 66 VKLL-VIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGT 124 Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + R Y L + + LVS R E A E+ E + Sbjct: 125 VDSRAYDDAL----QAVPGVELVSQA--CPRFVELAERGVTTGPEVLDVAEEYLAPIKAA 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYPL+V + V + +SD A+ Sbjct: 179 GVDTLILGCTHYPLLVGPISYVMGRDVTLVTSSDETAK 216 >gi|145296506|ref|YP_001139327.1| glutamate racemase [Corynebacterium glutamicum R] gi|140846426|dbj|BAF55425.1| hypothetical protein [Corynebacterium glutamicum R] Length = 284 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 6/195 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++ Sbjct: 24 IGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADELVERG 83 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ VIACNTA + R + +PA+++A A T++G + ++ T T+ Sbjct: 84 CKMI-VIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTINSG 142 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L + S +V + + R ++ +I + + + D + Sbjct: 143 AYQDLFSASPS-----IVVNAVACPRFVDFVERGITSGRQILNIAQDYLEPLQAEGVDTL 197 Query: 196 VLACTHYPLIVHVFR 210 VL CTHYPL+ V + Sbjct: 198 VLGCTHYPLLSGVIQ 212 >gi|219685353|ref|ZP_03540172.1| glutamate racemase [Borrelia garinii Far04] gi|219673126|gb|EED30146.1| glutamate racemase [Borrelia garinii Far04] Length = 260 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 19/197 (9%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + +++L Sbjct: 2 KNFKEVIIVFDSGIGGLSYFKYIKNKIDGYQYVYVADNKNFPYGEKSSEYLLEAILYLIE 61 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + Y ++ACNT + ++L FP + L V I A + +++T Sbjct: 62 KLNKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSLISDLAL----KRVLLIATN 117 Query: 130 ATLRRTYTSNLIHSYVSQCHIH----LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 TL + + Q +IH + ++ L + VE G K ++D ++ +E Sbjct: 118 TTLESKFVKD-------QVNIHNDLIVKAAGELVNFVEH---GEKYRKDALRC-LEALKF 166 Query: 186 EKEGKRTDVIVLACTHY 202 E +++ L CTHY Sbjct: 167 EVVNTDREIVFLGCTHY 183 >gi|260910465|ref|ZP_05917134.1| glutamate racemase [Prevotella sp. oral taxon 472 str. F0295] gi|260635411|gb|EEX53432.1| glutamate racemase [Prevotella sp. oral taxon 472 str. F0295] Length = 279 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 13/229 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + F ++ + Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYG---PRSFDVVYQFTRQAVIKLF 67 Query: 76 QPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + L +I CNTA ++ + +L S LG + P + + T + + IL+ Sbjct: 68 EQGCHLIIIGCNTASAKALRSIQQRDLPSLDAKRRVLGIIRPTAETIGSLTATRHVGILA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ I + ++ + A+ VE + +KK I+ + + Sbjct: 128 TEGTIKSDSYRLEIQKLFPDIQVQGMACPLWAAIVEANEADSPGADYFVKKRIDA--LMR 185 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + D IVL CTHYPL+++ + P V + + +A + L R Sbjct: 186 TDPQIDAIVLGCTHYPLLMNSIVKHVPSGVRIVPQGEYVANSLQQYLQR 234 >gi|154484251|ref|ZP_02026699.1| hypothetical protein EUBVEN_01963 [Eubacterium ventriosum ATCC 27560] gi|149734728|gb|EDM50645.1| hypothetical protein EUBVEN_01963 [Eubacterium ventriosum ATCC 27560] Length = 270 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 13/195 (6%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDIL 72 +I +FDSG+GGL V +++ +PE Y D PYG+ + + R + F L Sbjct: 7 AIGVFDSGVGGLTVAREIIRQLPEESITYFGDTARVPYGSKSKDTIIRYSRQIIRF---L 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 V+ACNTA D + + +G V P K A T++ I I+ T T Sbjct: 64 KTKNVKAIVVACNTASAFALDTIEKEI-DIPIIGVVKPGAKSAVESTKNKRIGIIGTEGT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190 ++ + IHS + + + + VEE + D + E+ ++E + + Sbjct: 123 IKSELYTQYIHSIDPEITVVGKACPLFVPLVEE-----GMLHDSVTDEVASRYLESMKEE 177 Query: 191 RTDVIVLACTHYPLI 205 D ++L CTHYPL+ Sbjct: 178 NIDSLILGCTHYPLL 192 >gi|125624017|ref|YP_001032500.1| glutamate racemase [Lactococcus lactis subsp. cremoris MG1363] gi|166231039|sp|A2RKH0|MURI_LACLM RecName: Full=Glutamate racemase gi|124492825|emb|CAL97780.1| MurI protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070787|gb|ADJ60187.1| glutamate racemase [Lactococcus lactis subsp. cremoris NZ9000] Length = 271 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 24/249 (9%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V +++ +P +Y+ D PYG + Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + + +L K ++ V+ACNT A ++K+EL + GA AI++ T Sbjct: 53 FTWDMVNFLLSKNVKMI-VMACNTATAMALEIVKEELDIPVIGVILPGASSAIQK----T 107 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ I +++T A++R I S + ++ S VE E EI K Sbjct: 108 KTNKIGVIATQASIRSDEYHKTIARKSSAIEVLSLACPKFVSIVESNEM-----ESEIAK 162 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--R 236 + + + D ++L CTHYPL+ + ++ V +D+ R LL Sbjct: 163 RVVSESLAPLVGKIDTLILGCTHYPLLRPLIQETMGKEVRLIDSGAEAVRDISVLLNYFE 222 Query: 237 INTHQTRVF 245 IN H+ + F Sbjct: 223 INAHERKEF 231 >gi|227488222|ref|ZP_03918538.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51867] gi|227542820|ref|ZP_03972869.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091792|gb|EEI27104.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181446|gb|EEI62418.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51866] Length = 261 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 24/204 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P Y+ D PYG ++ L +D L Sbjct: 6 IGIFDSGVGGLTVARAIADQLPHESIHYLGDTAHAPYGPRTADEVRA-LSTSVADQLVAR 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L VIACNTA ++ DE R+ + + LG + PA+++A T++G +++L T T+R Sbjct: 65 DIKLLVIACNTATSVFLDEARALY-DVPVLGVIEPAVRRAVQVTKNGKVAVLGTVGTIRS 123 Query: 135 TYTSNLIHSYVS-QCH-------IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 + SY C+ + V I R +I + Sbjct: 124 GEYQRQMESYEGVTCYAAPAPRFVDFVERGITTGR-------------QILGVAQAYVSP 170 Query: 187 KEGKRTDVIVLACTHYPLIVHVFR 210 + D VL CTHYPL+ V + Sbjct: 171 LQEAGVDTCVLGCTHYPLLSGVIQ 194 >gi|288928934|ref|ZP_06422780.1| glutamate racemase [Prevotella sp. oral taxon 317 str. F0108] gi|288329918|gb|EFC68503.1| glutamate racemase [Prevotella sp. oral taxon 317 str. F0108] Length = 279 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++N+P + I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + Sbjct: 1 MNNFPQQA---GPIGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYG---PRSFDV 54 Query: 63 RLMFLFSDILDKYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQA 114 F ++ ++ L +I CNTA ++ + +L S LG + P + Sbjct: 55 VYQFTRQAVVKLFEQGCHLIIIGCNTASAKALRSIQQRDLPSLDAKRRVLGIIRPTAESI 114 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 + T + + IL+T T++ I + ++ + A+ VE + Sbjct: 115 GSLTSTRHVGILATEGTIKSDSYRLEIQKLFPDIVVQGMACPLWAAIVEANEADSPGADY 174 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +KK I+ + + D IVL CTHYPL+++ + P V + + +A + L Sbjct: 175 FVKKRIDSLL--RTDPQIDAIVLGCTHYPLLMNSIVKHVPPGVRIVPQGEYVANSLQQYL 232 Query: 235 PR 236 R Sbjct: 233 QR 234 >gi|314930288|gb|EFS94119.1| glutamate racemase [Propionibacterium acnes HL067PA1] Length = 284 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 112/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + +IACNTA + + + R + +PA +A+A T++G I ++ T AT Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAACRASAATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEA------ 181 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESG 229 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 + + FL+ + + RRLM+GF Sbjct: 230 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|167626313|ref|YP_001676813.1| glutamate racemase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668746|ref|ZP_04756324.1| glutamate racemase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877277|ref|ZP_05249987.1| glutamate racemase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596314|gb|ABZ86312.1| Glutamate racemase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254843298|gb|EET21712.1| glutamate racemase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 265 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 15/194 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL V++ + ++P IY D PYG ++K ++D+ Sbjct: 7 IGVFDSGIGGLTVVKNLMNILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQE 66 Query: 76 QPVLSVIACNTAFTLIKD---ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + +IACNT + KD E+ T P + + A ++ + + +++TPAT+ Sbjct: 67 VKAI-IIACNTISAIAKDIVQEIAKTVPVIDVISAGVSLVDSLK-----TVGVIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191 + IH ++ S + S +EE E E+ + + ++E K Sbjct: 121 NSNAYALQIHKNNPSTEVYSSSCGLFVSMIEE-----GFIEGEVVELVAKQYLEYFNDKN 175 Query: 192 TDVIVLACTHYPLI 205 ++L CTHYP+I Sbjct: 176 IQALILGCTHYPII 189 >gi|301596669|ref|ZP_07241677.1| glutamate racemase [Acinetobacter baumannii AB059] Length = 256 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 9/203 (4%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 +P +Y AD PYG D +++ L D L + ++V+ACNTA D L Sbjct: 11 LPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQGCKIAVVACNTASAFSLDHL 69 Query: 96 RSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV--SQCHIHL 152 R + +G VPA+K A T+S ++++L+TPAT R +++ + + + Sbjct: 70 REHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKFAVPAGVKVMT 129 Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212 ++S+ L VE + + +++ ++ ++G D +VL CTHYP + L Sbjct: 130 LTSLELVPCVEAGQQMSPVCLNALREVLQPAV--EQG--ADYLVLGCTHYPFLNEAIHHL 185 Query: 213 SPWPVDWLDNSDSIARR-ARCLL 234 +D+ ++AR+ AR L+ Sbjct: 186 FDNQFTLVDSGLAVARQTARILI 208 >gi|282880529|ref|ZP_06289236.1| glutamate racemase [Prevotella timonensis CRIS 5C-B1] gi|281305632|gb|EFA97685.1| glutamate racemase [Prevotella timonensis CRIS 5C-B1] Length = 292 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 9/219 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L +R L+P+Y F+Y+ D+ PYG + + + + + + Sbjct: 19 IGVFDSGYGGLTILHSIRRLLPQYDFLYLGDNARAPYGTRSFEVVYEFTLQAVTKLFE-M 77 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ CNTA ++ +++L LG + P + TQS + +L+T Sbjct: 78 GCHLVILGCNTASAKALRSIQQNDLPHLDAKRRVLGVIRPTAEIIGKLTQSRHVGLLATE 137 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ I + + V+ VE + +KK ++ + K+G Sbjct: 138 GTVKSESYPLEIQKFYPDIQVSGVACPFWVPLVEYNEANSPGADYFVKKRMD-ALMAKDG 196 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D I+L CTHYPL++ + + V + + +AR Sbjct: 197 A-IDTIILGCTHYPLLMAKIEKYNKPGVRIVAQGEYVAR 234 >gi|210632427|ref|ZP_03297355.1| hypothetical protein COLSTE_01251 [Collinsella stercoris DSM 13279] gi|210159522|gb|EEA90493.1| hypothetical protein COLSTE_01251 [Collinsella stercoris DSM 13279] Length = 292 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 15/240 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL V + + +P YV D PYG + ++ + L Sbjct: 5 ERPIGVFDSGLGGLTVARCIAESLPHESIYYVGDTKRCPYGVRSEEEVRA-FVLQAGHWL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA + P P + A T++ + +L+TP T+ Sbjct: 64 AEHDVKIMVIACNTATAAGLRIAQQILPVPVIGVIAPGARAAINSTRTRKVGVLATPLTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKE-----------DEIKKEI 180 R + I + +++ + VE E A G ++E E + E+ Sbjct: 124 RTGAYTRAIQDLDAGVNVYGCPAPSFVEIVERELATGAHLQERWLQDGDIFDTPENRAEV 183 Query: 181 EGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 E I + G + D +VL CTH+PL+ R V + +++ R +L R N Sbjct: 184 ERTLAPIVEGGAQVDTVVLGCTHFPLLAGPIRHALGPDVRVVSSAEETTRELEDILRRRN 243 >gi|72162561|ref|YP_290218.1| glutamate racemase [Thermobifida fusca YX] gi|71916293|gb|AAZ56195.1| glutamate racemase [Thermobifida fusca YX] Length = 256 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 11/195 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R + P+ I D P+G + R + +LD+ Sbjct: 3 IALVDSGIGLLSTAAALRRIRPDADLILSMDPDYMPWGPRSVPEIVARALAGARAVLDE- 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 QP V+ACNTA + LR+ P + +G VPA+K AA + +I +TPAT Sbjct: 62 QPDAVVVACNTASVHALESLRAELEPRIPVIGTVPAVKPAA--DRGAPFAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y +LI + + V+ LA VE + + + ++ Sbjct: 120 PYQRDLIDRFARGIAVTPVACPGLADAVE------RADPAAVAEAVDHAAAHTPAD-VSA 172 Query: 195 IVLACTHYPLIVHVF 209 +VL CTHY L+ V Sbjct: 173 VVLGCTHYDLVSDVI 187 >gi|311741210|ref|ZP_07715034.1| glutamate racemase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303380|gb|EFQ79459.1| glutamate racemase [Corynebacterium pseudogenitalium ATCC 33035] Length = 259 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 22/205 (10%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V + + +P IY D PYG ++ + +++ Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPHESVIYTGDTAHSPYGPRPISEVRAFSQGVADRLVE 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + +L VIACNTA + R + PA+++A + T++G I ++ T T++ Sbjct: 66 RGCKML-VIACNTATAAFLHDARERYDIPIVEVIRPAVRRAMSTTRNGKIGVIGTEGTIK 124 Query: 134 RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 +L + ++ + C + V I A R +I EG Sbjct: 125 SGAYQDLFALNPKVQAFATACPDFVPFVERGITAGR-------------QILGVAEGYLA 171 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFR 210 + + D +VL CTHYPL+ + + Sbjct: 172 PLQAQGVDTLVLGCTHYPLLTGIIQ 196 >gi|163791540|ref|ZP_02185944.1| glutamate racemase [Carnobacterium sp. AT7] gi|159873176|gb|EDP67276.1| glutamate racemase [Carnobacterium sp. AT7] Length = 272 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 11/229 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I DSG+GGL V+++ +P YV D PYG + +++ + +L Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEEQVRQFTWEMTHFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 +K +L VIACNTA + ++L+ ++ +G + P + A T++ I ++ T T Sbjct: 63 NKDIKML-VIACNTATAVALEDLKKKL-AIPIIGVILPGSRAAIKATKNNHIGVIGTEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ +I S + + ++ VE EY I KK + + Sbjct: 121 VKSEKYKKMIQSKDTLASVSSLACPKFVPIVESNEYGSAIA------KKIVAETLKPFKN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 K D ++L CTHYPL+ + + + V +D+ +L N Sbjct: 175 KNIDTLILGCTHYPLLRPIIQNVMGDSVTLIDSGAETISEVSTILDYFN 223 >gi|332665127|ref|YP_004447915.1| glutamate racemase [Haliscomenobacter hydrossis DSM 1100] gi|332333941|gb|AEE51042.1| Glutamate racemase [Haliscomenobacter hydrossis DSM 1100] Length = 267 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 8/192 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL V + +P IY D PYG+ A++ + + +LD+ Sbjct: 8 IGVFDSGIGGLTVANAIVKKLPNEEIIYFGDTAHLPYGDKSADAIRYYCLRISKFLLDQG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++ V+ACN+A + D L F A F+ V + A A + +++T AT++ Sbjct: 68 CKMI-VVACNSASSAGYDVLLEFFRDQALFVNVVDPLVSAVAKRGFDKVGVIATKATVQS 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRTD 193 +H ++ +++ +LA +EE ++ K I ++ G + Sbjct: 127 GIYHKQLHRVSPTLNVESLATPLLAPMIEE-----GFVHNQASKAILDMYLAHPGFVDIE 181 Query: 194 VIVLACTHYPLI 205 ++LACTHYPLI Sbjct: 182 ALLLACTHYPLI 193 >gi|313887367|ref|ZP_07821057.1| glutamate racemase [Porphyromonas asaccharolytica PR426713P-I] gi|312923135|gb|EFR33954.1| glutamate racemase [Porphyromonas asaccharolytica PR426713P-I] Length = 281 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 27/222 (12%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++++ I +FDSG GGL +L+K++ +P+Y F+Y+ D+ PYG+ + + Sbjct: 2 QQIEGPIGVFDSGYGGLTILRKLQEQLPQYDFVYLGDNARSPYGSRSMRVVYQFTREAVE 61 Query: 70 DILDKYQPVLSVIACNTAFT-LIKDELRSTFPSM-------AFLGAV-PAIKQAAAYTQS 120 + D P L ++ACNTA ++ + P + LG + P ++ T + Sbjct: 62 RLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTST 120 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE----- 175 + IL+T T+ SYV++ H ++ + ++ E + Sbjct: 121 KHVGILATEGTVSS-------ESYVTEIHKLYPDVTVVQEACPLWVPIVETGESDSPGAD 173 Query: 176 --IKKEIEGCFIEKEGKRTDVIVLACTHYPLIV-HVFRQLSP 214 ++K +E + E + D I+L CTHYP+++ + R L+P Sbjct: 174 FFVRKHLERLLAQDE--KIDTIILGCTHYPILMPKIQRLLTP 213 >gi|126640457|ref|YP_001083441.1| glutamate racemase [Acinetobacter baumannii ATCC 17978] Length = 256 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 9/203 (4%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 +P +Y AD PYG D +++ L D L + ++V+ACNTA D L Sbjct: 11 LPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQGCKIAVVACNTASAFSLDHL 69 Query: 96 RSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV--SQCHIHL 152 R + +G VPA+K A T+S ++++L+TPAT R +++ + + + Sbjct: 70 REHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKFAVPAGVKVMT 129 Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212 ++S+ L VE + + +++ ++ ++G D +VL CTHYP + L Sbjct: 130 LTSLELVPCVEAGQQMSPVCLNALREVLQPAV--EQG--ADYLVLGCTHYPFLNEAIHHL 185 Query: 213 SPWPVDWLDNSDSIARR-ARCLL 234 +D+ ++AR+ AR L+ Sbjct: 186 FDNQFTLVDSGLAVARQTARILI 208 >gi|313890894|ref|ZP_07824518.1| glutamate racemase [Streptococcus pseudoporcinus SPIN 20026] gi|313120792|gb|EFR43907.1| glutamate racemase [Streptococcus pseudoporcinus SPIN 20026] Length = 264 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 10/243 (4%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V++++ +P + +YV D PYG +++ L + ++ K + Sbjct: 9 LDSGVGGLTVVRELMRQLPYENIVYVGDSARAPYGPRPAEQIREYTWELVNFLVTKNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E++ + LG + P A T G + ++ TP T+ Sbjct: 69 I-VFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGHVGVIGTPMTVTSDIY 126 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 I + ++ VE +I+ KK + GK D +VL Sbjct: 127 RQKIQLLAPAVEVISLACPKFVPIVESN----EIQSSVAKKVVYETLAPLVGK-VDTLVL 181 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALFLSGK 255 CTHYPL+ + + + V +D+ R LL + +R + H + + Sbjct: 182 GCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINSSRYQEKVRHYFYTTAS 241 Query: 256 PDI 258 P+I Sbjct: 242 PEI 244 >gi|313835875|gb|EFS73589.1| glutamate racemase [Propionibacterium acnes HL037PA2] gi|314927125|gb|EFS90956.1| glutamate racemase [Propionibacterium acnes HL044PA1] gi|314970768|gb|EFT14866.1| glutamate racemase [Propionibacterium acnes HL037PA3] gi|328906033|gb|EGG25808.1| glutamate racemase [Propionibacterium sp. P08] Length = 284 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG ++ + + Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRHYALQCLDRL 68 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + L +IACNTA + + + R + +PA ++A++ T++G I ++ T AT Sbjct: 69 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASSATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + +Y I+ Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIARQYLAPIQEA------ 181 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + V + +S AR + L Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLIAYVLGDDVTLISSSHQCARASYSLTAESG 229 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 +R + FL+ + + RRLM+GF Sbjct: 230 LLHSRPRESSRYFLTTGNAERFERLGRRLMEGF 262 >gi|28210023|ref|NP_780967.1| glutamate racemase [Clostridium tetani E88] gi|28202458|gb|AAO34904.1| glutamate racemase [Clostridium tetani E88] Length = 266 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 9/199 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL +++++ L+P + Y D+ PYGN + + + ++ + Sbjct: 14 IGVLDSGVGGLTTVKELQELLPNENIYYFGDNKNVPYGNKTQEEIIQFTRNMIEFLVSQN 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V++V ACNT T+I D++ + P + + + +++T T+ Sbjct: 74 VKVIAV-ACNTISTII-DKISGDYDVKIIKVIDPIVNNIKNIQKKHKVGLIATSFTISTK 131 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y ++ + S LA+ V+ K +D IK IE K + D I Sbjct: 132 YYDEML----GDVKVIGKGSPELAAIVDSGEINEKEVKDIIKVHIEDI---KSRENVDTI 184 Query: 196 VLACTHYPLIVHVFRQLSP 214 +L CTHYP+I H F + P Sbjct: 185 ILGCTHYPIIKHFFDECYP 203 >gi|239944153|ref|ZP_04696090.1| glutamate racemase [Streptomyces roseosporus NRRL 15998] gi|239990608|ref|ZP_04711272.1| glutamate racemase [Streptomyces roseosporus NRRL 11379] gi|291447623|ref|ZP_06587013.1| glutamate racemase [Streptomyces roseosporus NRRL 15998] gi|291350570|gb|EFE77474.1| glutamate racemase [Streptomyces roseosporus NRRL 15998] Length = 277 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 16/195 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL V+ ++ L+P H IY+ D PYG ++K + ++ Sbjct: 8 IGVFDSGFGGLTVVSALQRLLPSEHIIYLGDSARQPYGARRLAEVRKMSLECLDQLVGLG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT-L 132 + VIACNTA + + R + P + +G PA + AA+ T++ + ++ T AT + Sbjct: 68 VKAI-VIACNTASAAVLRDARERYQVPVIEVVG--PASRMAASATKNHSVGVVCTEATRV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEGK 190 + Y ++ + HI LV+ A V G+ + + ++ +E + Sbjct: 125 AKAYED----AFAAAPHIDLVTKACPAF-VGFVEAGVTTGPELVSVAEQYLTPLVEAD-- 177 Query: 191 RTDVIVLACTHYPLI 205 D ++L CTHYPLI Sbjct: 178 -IDTLILGCTHYPLI 191 >gi|169829488|ref|YP_001699646.1| glutamate racemase [Lysinibacillus sphaericus C3-41] gi|229486243|sp|B1HW77|MURI_LYSSC RecName: Full=Glutamate racemase gi|168993976|gb|ACA41516.1| Glutamate racemase [Lysinibacillus sphaericus C3-41] Length = 265 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 12/243 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V +++ +P Y+ D PYG ++ + + L+K Sbjct: 5 IGVIDSGVGGLTVAKEIIKRLPNETIYYIGDTARCPYGPRSRQEVRN-FTWQMAKALEKM 63 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134 + VIACNTA + + L+ P LG + A +AA T+ + +L+T T++ Sbjct: 64 NIKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEGTIKS 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + S + HI ++ VE EY K + K I + ++ Sbjct: 123 GAYEEALLSLNTSTHIIPLACPTFVPLVESGEY------KGEFATKLIAEGLKPLKNQQF 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251 D ++L CTHYP++ + V+ L +++ A+ A+ +L T H F Sbjct: 177 DTVILGCTHYPILQKQIEAVVGEEVNVLSSAEETAKDAQEMLAYNGTLANANTVPAHKFF 236 Query: 252 LSG 254 +G Sbjct: 237 ATG 239 >gi|293572584|ref|ZP_06683558.1| glutamate racemase [Enterococcus faecium E980] gi|291607367|gb|EFF36715.1| glutamate racemase [Enterococcus faecium E980] Length = 270 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 11/219 (5%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++ +P + ++V D PYG + + + +D L + Sbjct: 10 IDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQYTWEMTDYLVEQGIK 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T++ Sbjct: 69 MLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAY 127 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + V + + ++ S VE EY + KK + K+ D + Sbjct: 128 EKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIVAETLAPLTTKKIDTL 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +L CTHYPL+ + + + V +D+ LL Sbjct: 182 ILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLL 220 >gi|254478075|ref|ZP_05091458.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653] gi|214035937|gb|EEB76628.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653] Length = 278 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 24/231 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GG+ VL+++ ++PE +IY D + PYGN ++K + L K Sbjct: 19 IGVIDSGVGGITVLKRLLEILPEEDYIYFGDTLRVPYGNRPKEEIEK-FTREIVNYLKKQ 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNT + I ++ + + F IK A T +G I +++T T+ Sbjct: 78 KVKAVVIACNTICSSIN---KNDYEILMFGILEAGIKSAVEATSNGRIGVIATKRTVE-- 132 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKED------EIKKEIEGCFIEK 187 S+ ++ + + + V + AC + I E+ I ++ C E Sbjct: 133 ----------SEAYLKGIKRLNRNAMVFQKACPELVLIVENGFYEASSIYTAVKKCTEEF 182 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 K D +VL CTH+P+++ ++ V +D + +A + L N Sbjct: 183 LEKDIDTLVLGCTHFPILLPFIERVVDNKVTVVDPAIKLAHEVKKYLVENN 233 >gi|298345217|ref|YP_003717904.1| glutamate racemase [Mobiluncus curtisii ATCC 43063] gi|298235278|gb|ADI66410.1| glutamate racemase [Mobiluncus curtisii ATCC 43063] Length = 269 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 11/194 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P IY+ D PYG +K+ + + ++D+ Sbjct: 6 IGIFDSGLGGLTVARSIIDQLPGESVIYIGDTANSPYGTKPVERVKELSLSVMDKLVDRG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAV-PAIKQAAAYTQSGLISILSTPATL 132 +L VIACNTA RS + + L + PA+ +A + T++G I +++T T+ Sbjct: 66 VKML-VIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIATHTTI 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191 +H+Y Q + + VE GI + + E ++E Sbjct: 125 ETETYQRALHAY-QQVQVSAKACPAFVDFVER---GITSGPELLAVARE--YLEPIRDAG 178 Query: 192 TDVIVLACTHYPLI 205 D +VL CTHYPL+ Sbjct: 179 VDTLVLGCTHYPLL 192 >gi|290962603|ref|YP_003493785.1| glutamate racemase [Streptomyces scabiei 87.22] gi|260652129|emb|CBG75261.1| putative glutamate racemase [Streptomyces scabiei 87.22] Length = 268 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 78/196 (39%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D G P+G L +R + + + Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLVISSDPDGMPWGPRTPQDLTERALAVATAAAAHA 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L ++ CNTA LR+ P + +G VPAIK AA + G +I +TPAT Sbjct: 63 PDAL-IVGCNTASVHALPALRALLEPGLPVIGTVPAIKPAA--SGGGPFTIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE + + Sbjct: 120 PYQRGLIEEFAGGVAVTEVPCWGLAEAVEHADDAAIDAAIAAAAALTPADV-------TT 172 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 173 VVLGCTHYELVAERIR 188 >gi|317504610|ref|ZP_07962579.1| glutamate racemase [Prevotella salivae DSM 15606] gi|315664281|gb|EFV03979.1| glutamate racemase [Prevotella salivae DSM 15606] Length = 278 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 17/201 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + ++ +M LF Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQAVMKLFE-- 68 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 L + L ++ CNTA ++ +++L + PS LG + P + TQ+ + + Sbjct: 69 LGCH---LVILGCNTASAKALRSIQQNDLPNITPSRRVLGVIRPTAEVIGTLTQNNHVGL 125 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T T++ I + + V+ VE + +KK I+ Sbjct: 126 LATEGTVKSHSYELEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRIDDLM- 184 Query: 186 EKEGKRTDVIVLACTHYPLIV 206 + D I+L CTHYP+++ Sbjct: 185 -RRDPAIDTIILGCTHYPILM 204 >gi|182416025|ref|YP_001821091.1| glutamate racemase [Opitutus terrae PB90-1] gi|177843239|gb|ACB77491.1| glutamate racemase [Opitutus terrae PB90-1] Length = 285 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 25/249 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL + +P Y ++++AD PYG + + + + D+ Sbjct: 2 IGVFDSGFGGLTVLASLLKTLPRYDYLFLADSARAPYGARSADVINEFTLEAVEWLFDQG 61 Query: 76 QPVLSVIACNTAFTLIKDEL------------------RSTFPSMAFL--GAVPAIKQAA 115 P L V+ACNTA L R + ++A L GA+P + A Sbjct: 62 CP-LVVLACNTASARALRNLQQLHLPAHRPDRRVLGVVRPSVEALAGLPPGAIPG--ETA 118 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 +G +++L T +T+ + + + + VE E Sbjct: 119 PSLATGTVAVLGTASTIASDSYAIELQKLAPGLTLIQQPCPMWVPLVEAGELDGPGAEYF 178 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 +++ +E ++L CTHYPL++ R+L P V+ LD + +A R L Sbjct: 179 LRRSLEPVL--NRAPLPQRLLLGCTHYPLLLPAIRRLVPASVEILDQGEIVATRLADWLQ 236 Query: 236 RINTHQTRV 244 R H+ R+ Sbjct: 237 RHRDHEARL 245 >gi|254671042|emb|CBA07884.1| Glutamate racemase [Neisseria meningitidis alpha153] gi|325132881|gb|EGC55559.1| glutamate racemase [Neisseria meningitidis M6190] Length = 327 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 122 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 183 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 238 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 239 IDTLVLGCTHFPLL 252 >gi|297250774|ref|ZP_06865032.2| glutamate racemase [Neisseria polysaccharea ATCC 43768] gi|296837995|gb|EFH21933.1| glutamate racemase [Neisseria polysaccharea ATCC 43768] Length = 327 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 122 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 183 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 238 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 239 IDTLVLGCTHFPLL 252 >gi|154491820|ref|ZP_02031446.1| hypothetical protein PARMER_01441 [Parabacteroides merdae ATCC 43184] gi|154088061|gb|EDN87106.1| hypothetical protein PARMER_01441 [Parabacteroides merdae ATCC 43184] Length = 278 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 17/222 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I IFDSG GGL + K+R MP Y +IY+ D+ PYG + K+ + LF++ Sbjct: 9 IGIFDSGYGGLTIFDKIRAAMPGYDYIYLGDNARSPYGTRSFEVVYRFTKQAVETLFNEG 68 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 L ++ACNTA T+ + +L P+ LG + P ++ ++S + I Sbjct: 69 CQ-----LVILACNTASAKALRTIQQRDLPQWDPARRVLGVIRPTVELMDKISKSKHVGI 123 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L T T+ S I + + + VE + ++K +E I Sbjct: 124 LGTTGTITSDSYSLEIKKMFPHMTVTGEACPMWVPLVENNEFDSPGADYFVRKHLE--HI 181 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTHYPL++ + P + + +A Sbjct: 182 LAADPEIDTLVLGCTHYPLLIEKIKAFLPEGITLFSQGEYVA 223 >gi|329770518|ref|ZP_08261896.1| glutamate racemase [Gemella sanguinis M325] gi|328836267|gb|EGF85936.1| glutamate racemase [Gemella sanguinis M325] Length = 264 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 19/266 (7%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + N+I +FDSG+GGL V +++ +P Y D PYG+ KK + + ++ Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDK-----KKDEIIINTEK 55 Query: 72 LDKY---QPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 KY Q V + ++ACNTA + L+ + + +G V P ++A T++ + +L Sbjct: 56 AIKYLINQGVKMIILACNTATAAALEYLQEKY-DLPIIGVVQPGARRAIQATENNKVLVL 114 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T I + S ++ + +E K + D+I KE I+ Sbjct: 115 GTKFTTTSEVYDIEIQNINSDIVVYDKACPSFVPFIESEGYLNKEEADDIIKETLNDTID 174 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D +VL CTHYP++ + + + + AR +L HQ++V Sbjct: 175 ---LGMDTVVLGCTHYPMLKKNIEEFYGNQIKVISSGREAAREVSTVLGYSKLHQSKVNK 231 Query: 247 -DHALFLSGKP----DIAMRRLMQGF 267 +H F+S K +IA + L Q Sbjct: 232 TEHKFFISAKSENFDNIASKWLKQNI 257 >gi|294670141|ref|ZP_06735066.1| glutamate racemase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308068|gb|EFE49311.1| glutamate racemase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 270 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 6/203 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL ++ + +P + +Y D PYG ++ + +L Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPLENIVYFGDTARVPYGVKSRATIETFTAQIVGFML 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + L VIACNT + ++R +M L + A QAA A T++ I +++T T Sbjct: 66 EHDVKAL-VIACNTIAAVAGHKVRQMAGNMPVLDVISAGAQAALATTRNNHIGVIATNTT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + + + VEE ++ ++ ++ E Sbjct: 125 VNSNAYAREIHRRNPAARVQSQACPLFVPLVEEGWLDHEVTRLTAREYLKPLLAED---- 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 D +VL CTHYPL+ + +Q +P Sbjct: 181 VDTLVLGCTHYPLLKPLLQQEAP 203 >gi|116512125|ref|YP_809341.1| glutamate racemase [Lactococcus lactis subsp. cremoris SK11] gi|123025382|sp|Q02YQ3|MURI_LACLS RecName: Full=Glutamate racemase gi|116107779|gb|ABJ72919.1| glutamate racemase [Lactococcus lactis subsp. cremoris SK11] Length = 271 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 24/249 (9%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V +++ +P +Y+ D PYG + Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + + +L K ++ V+ACNTA ++K+EL + GA AI++ T Sbjct: 53 FTWDMVNFLLSKNVKMI-VMACNTATAMTLEIVKEELDIPVIGVILPGASSAIQK----T 107 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ I +++T A++R I S + ++ S VE E EI K Sbjct: 108 KTNKIGVIATQASIRSDEYHKTIARKSSAIEVLSLACPKFVSIVESNEM-----ESEIAK 162 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--R 236 + + + D ++L CTHYPL+ + ++ V +D+ R LL Sbjct: 163 RVVSESLAPLVGKIDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLLNYFE 222 Query: 237 INTHQTRVF 245 IN H+ + + Sbjct: 223 INAHERKEY 231 >gi|269214987|ref|ZP_05987513.2| glutamate racemase [Neisseria lactamica ATCC 23970] gi|269208607|gb|EEZ75062.1| glutamate racemase [Neisseria lactamica ATCC 23970] Length = 326 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 121 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 122 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 182 VNSNAYARAIHRSNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 237 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 238 IDTLVLGCTHFPLL 251 >gi|108804439|ref|YP_644376.1| glutamate racemase [Rubrobacter xylanophilus DSM 9941] gi|108765682|gb|ABG04564.1| glutamate racemase [Rubrobacter xylanophilus DSM 9941] Length = 281 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 7/198 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL ++R +P H IY D PYG D A + + L Sbjct: 7 IGVFDSGVGGLTVLAEIRDRLPYEHTIYFGDTARVPYG-VRDLAEVRWFAYEIIRYLVSL 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L VIACNTA + +F + +G + P + A T++ + +L+TPAT+ Sbjct: 66 NVKLVVIACNTATAAALMTAQRSF-DVPIIGVIEPGARAAVLETRNRRVGVLATPATVES 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + I + ++ ++ +E GI E++ + + DV Sbjct: 125 GAYAKAISYLDAGIEVYEQAAPEFVPLIER---GIT-SGPELEAAARRYLAPLQERGADV 180 Query: 195 IVLACTHYPLIVHVFRQL 212 ++L CTHYPLI ++ Sbjct: 181 VILGCTHYPLISETINRI 198 >gi|304386743|ref|ZP_07369012.1| glutamate racemase [Neisseria meningitidis ATCC 13091] gi|304339178|gb|EFM05263.1| glutamate racemase [Neisseria meningitidis ATCC 13091] Length = 327 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 122 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 183 VNSNAYARAIHRSNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 238 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 239 IDTLVLGCTHFPLL 252 >gi|169628573|ref|YP_001702222.1| glutamate racemase [Mycobacterium abscessus ATCC 19977] gi|169240540|emb|CAM61568.1| Probable glutamate racemase MurI [Mycobacterium abscessus] Length = 282 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 7/191 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ + Sbjct: 6 IGIFDSGVGGLTVARAIIDQLPDEDILYVGDTGNGPYGPLTIPEIRTHALTIGDDLVGRG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L VIACNTA + R + + + V PA+++A T + I ++ T AT+ Sbjct: 66 VKAL-VIACNTASAACLRDARERYAPVPVIEVVLPAVRRAVHTTHNNKIGVIGTEATI-- 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 S + ++++ V+ GI ++ + EG + + D Sbjct: 123 --ASGAYQDAFAAARDTEITAVACPRFVDFVERGITSGR-QVLQLAEGYLEPLQRAQVDT 179 Query: 195 IVLACTHYPLI 205 +VL CTHYPL+ Sbjct: 180 VVLGCTHYPLL 190 >gi|325128817|gb|EGC51677.1| glutamate racemase [Neisseria meningitidis N1568] Length = 255 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|302549431|ref|ZP_07301773.1| glutamate racemase [Streptomyces viridochromogenes DSM 40736] gi|302467049|gb|EFL30142.1| glutamate racemase [Streptomyces viridochromogenes DSM 40736] Length = 283 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 78/196 (39%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + D G P+G L +R + + + Sbjct: 3 IALMDSGIGLLAATTAVRRLRPDADLVLSLDPDGMPWGPRTPENLTERALAVAEAAAARR 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L ++ CNTA LR+ F P + +G VPAIK AAA G +I +TPAT Sbjct: 63 PDAL-IVGCNTATVHALTALRARFEPDLPVIGTVPAIKPAAA--GGGHFAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 TY LI + + V LA VE + Sbjct: 120 TYQRTLIRDFADGVPVTEVPCWGLAEAVEHADEAAIAAAVAAAAAL-------TPDEVTT 172 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 173 VVLGCTHYELVAERIR 188 >gi|224282549|ref|ZP_03645871.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171] gi|310287011|ref|YP_003938269.1| glutamate racemase [Bifidobacterium bifidum S17] gi|311063884|ref|YP_003970609.1| glutamate racemase MurI [Bifidobacterium bifidum PRL2010] gi|313139703|ref|ZP_07801896.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171] gi|309250947|gb|ADO52695.1| glutamate racemase [Bifidobacterium bifidum S17] gi|310866203|gb|ADP35572.1| MurI Glutamate racemase [Bifidobacterium bifidum PRL2010] gi|313132213|gb|EFR49830.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171] Length = 269 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 24/229 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V++++ MP +Y D PYG + +RL F DI++++ Sbjct: 7 IGVFDSGLGGISVVRQIVQDMPHERVLYFGDSANAPYGTKTPQEV-RRLSF---DIMERF 62 Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSG--------- 121 Q V + VIACNTA + + LR + + +G PA+K A T +G Sbjct: 63 MSQGVKAVVIACNTATSAAVNALRDHY-DIPIIGMEPALKVACDRGDTAAGDGPAPARHM 121 Query: 122 --LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + + +TP TLR + L+ + + +++S VE G D + + Sbjct: 122 PQHVIVAATPLTLREHKFAALMDRFKAN---NMISPQPCPDLVEIVESGRLCDHDLVMRT 178 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + F + D +VL CTH+ FR+L P +D + R Sbjct: 179 LHRYFDGYDLPSIDSVVLGCTHFVFYRDYFRELLPSTTAIIDGNRGTVR 227 >gi|197103587|ref|YP_002128964.1| glutamate racemase [Phenylobacterium zucineum HLK1] gi|229486245|sp|B4RCD6|MURI_PHEZH RecName: Full=Glutamate racemase gi|196477007|gb|ACG76535.1| glutamate racemase [Phenylobacterium zucineum HLK1] Length = 283 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 94/230 (40%), Gaps = 40/230 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70 +I +FDSG+GGL V ++ P+ F+Y+AD PYG + K + LF Sbjct: 2 AIGVFDSGVGGLTVHHRLVERFPDADFVYLADQANAPYGGRPGEEIVELTKAGCIRLFEA 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDEL---------RSTFPSMAFLG-AVPAIKQAAA---- 116 D L V+ACNTA ++ L R T ++ LG VP I+ A Sbjct: 62 GCD-----LVVLACNTAASVALRRLQQTWLPGYRRETGRALNVLGIVVPTIEAATGLPWE 116 Query: 117 ---------YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167 + ++ + STPAT R I + LA +E A Sbjct: 117 HEAERRGEKVEKLDILGVFSTPATARSRVYEIEIDKRRQDVAVFSEPCPELARMIEAGA- 175 Query: 168 GIKIKEDEIKKEIEG---CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 +E+K IEG + G+ D +L CTHY ++ +FR+ P Sbjct: 176 ----PREELKAVIEGHVQALRTRIGRAPDRAILGCTHYEIVADLFREALP 221 >gi|227502996|ref|ZP_03933045.1| glutamate racemase [Corynebacterium accolens ATCC 49725] gi|227076057|gb|EEI14020.1| glutamate racemase [Corynebacterium accolens ATCC 49725] Length = 259 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 24/230 (10%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V + + +P+ IY D PYG ++ + ++++ Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPQESVIYKGDTAHGPYGPRPISQVRAFSQDIADELVE 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + +L VIACNTA + R + + L + PA+++A + T++G I ++ T T+ Sbjct: 66 RGCKML-VIACNTATAAFLHDARERY-DIPILEVIRPAVRRAMSTTRNGKIGVIGTEGTI 123 Query: 133 RRTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +L + + + C + V I A R +I EG Sbjct: 124 KSGAYQDLFAVNPNVEAVAAACPDFVPFVERGITAGR-------------QILGVAEGYL 170 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + D +VL CTHYPL+ + V + +S+ + LL Sbjct: 171 APLQAQGVDTLVLGCTHYPLLTGTIQLAMGENVSLVTSSEETTKDVMRLL 220 >gi|327399664|ref|YP_004340533.1| glutamate racemase [Hippea maritima DSM 10411] gi|327182293|gb|AEA34474.1| Glutamate racemase [Hippea maritima DSM 10411] Length = 254 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 16/215 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYH--FIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL V+++ L+ ++ IY+ D PYG + K ++ L Sbjct: 7 IGVFDSGVGGLSVVKQ---LLKAFNSDIIYLGDTARLPYGTKSKETVLK-YSIQNAEFLM 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ V+ACNTA ++ D L+ F F PA K AA + + + ++ T +T++ Sbjct: 63 RFNVDAIVVACNTASSVAIDVLKKKFNLPVFGVIEPAAKLAAKFEK---VCVIGTTSTIQ 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I Y C + + + VEE D+I E+ ++ D Sbjct: 120 SNAYPKKIAKYNKGCRVTQRACPLFVPLVEE-----GWIYDDITYEVAKRYLYD--LECD 172 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++L CTHYPL+ + +++ V +D+ +++ + Sbjct: 173 ALILGCTHYPLLREIIQRVMGVGVSLIDSGEALVK 207 >gi|269955858|ref|YP_003325647.1| glutamate racemase [Xylanimonas cellulosilytica DSM 15894] gi|269304539|gb|ACZ30089.1| glutamate racemase [Xylanimonas cellulosilytica DSM 15894] Length = 268 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 36/230 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P +Y+ D PYG A++ + + D++D+ Sbjct: 6 IGVFDSGVGGLTVARAILDQLPHEQVLYIGDTANAPYGPKPLAAVRAMALAVMDDLVDQG 65 Query: 76 QPVLSVIACNTAFTLI------KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L VIACN+A + + E+R P + + PA ++A ++SG I ++ T Sbjct: 66 VKLL-VIACNSATAVALPDARERYEVRRGIPVVEVI--RPAARRAVVTSRSGRIGVIGTK 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEK 187 AT I S + H+ +I+ ++ AC + + E I G I Sbjct: 123 AT---------IDSRAYEDAFHVTPGLIITTQ----ACPEFVPLVERGITS---GPEILA 166 Query: 188 EGKR---------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 R D +VL CTHYPL+ + V + +++ A+ Sbjct: 167 AAHRYLDPVRDAGVDTLVLGCTHYPLLAGAISYVMGEDVTLVSSAEETAK 216 >gi|254479197|ref|ZP_05092544.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653] gi|214034860|gb|EEB75587.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653] Length = 264 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 34/252 (13%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I +FDSG+GGL VL+++ ++PE +IY D PYG+ K+ + I++ Sbjct: 6 IGVFDSGVGGLTVLKRLIQVLPEEDYIYFGDTKRVPYGDRS----KEEIELFAGQIINFM 61 Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPAT 131 K + V + VIACNT I + + + + A ++ Y T++ + +++T T Sbjct: 62 KEKNVKAVVIACNTTCATID---KGKY-DIELFDVLKAGAESGVYCTKNKKVGVIATKRT 117 Query: 132 LR-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + R+Y N+ I Y C + L+ + S + Y+ E Sbjct: 118 VESRSYEINIKSINPQIEVYQKACPEFVPLIEKGLYNSPL-AYSVA------------EK 164 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 C + + K D ++L CTHYPL+ + +++ V+ +D + +A + L + N + Sbjct: 165 CLKDLKAKEIDTLILGCTHYPLMEGIIKEIMGDGVEVVDPAIRLAFEVKKYLEKNNILNS 224 Query: 243 RVFDDHALFLSG 254 F+SG Sbjct: 225 GPKGKIEFFVSG 236 >gi|260592030|ref|ZP_05857488.1| glutamate racemase [Prevotella veroralis F0319] gi|260536314|gb|EEX18931.1| glutamate racemase [Prevotella veroralis F0319] Length = 279 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 17/231 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + ++ +M LF Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVMKLFESG 70 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 L ++ CNTA ++ +++L P LG + P + T+S + + Sbjct: 71 CQ-----LVILGCNTASAKALRSIQQNDLPKLDPQRRVLGVIRPTAEVIGKLTRSHHVGL 125 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T T++ + I + V+ + +E + +KK I+ I Sbjct: 126 LATEGTVKSQSYNIEIQKLWPDVKVTGVACPLWVPIIENNEADSPGADYFVKKRID--HI 183 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + D ++L CTHYP+++ + P V + + +A + L R Sbjct: 184 MRIDPEIDTLILGCTHYPILMPKIIKYVPRGVRIVPQGEYVAESLQDYLRR 234 >gi|121635399|ref|YP_975644.1| glutamate racemase [Neisseria meningitidis FAM18] gi|20177991|sp|Q9RMM3|MURI_NEIMC RecName: Full=Glutamate racemase gi|166231045|sp|A1KVG8|MURI_NEIMF RecName: Full=Glutamate racemase gi|6449085|gb|AAF08814.1|AF194079_1 MurI [Neisseria meningitidis] gi|120867105|emb|CAM10872.1| glutamate racemase [Neisseria meningitidis FAM18] gi|261391971|emb|CAX49435.1| glutamate racemase [Neisseria meningitidis 8013] gi|325142940|gb|EGC65299.1| glutamate racemase [Neisseria meningitidis 961-5945] gi|325205523|gb|ADZ00976.1| glutamate racemase [Neisseria meningitidis M04-240196] Length = 270 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|317508768|ref|ZP_07966418.1| Asp/Glu/Hydantoin racemase [Segniliparus rugosus ATCC BAA-974] gi|316252931|gb|EFV12351.1| Asp/Glu/Hydantoin racemase [Segniliparus rugosus ATCC BAA-974] Length = 287 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 31/231 (13%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I +FDSG+GGL V + + L+P YVAD PYG ++K + + Sbjct: 5 KSEAPIGVFDSGVGGLTVARAIAELLPNEEMRYVADSAHQPYGPQSVAQVRKHALAVLDS 64 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++++ +L VIACN+A + R +P +PA++ A A T++G I ++ T Sbjct: 65 LVEEGVKML-VIACNSASVACLADARERYPVPVVEVVLPAVRSALAATRTGRIGVIGTRI 123 Query: 131 TL-RRTYTSNLIHSYVSQCHIHLVSS------------MILASRVEEYACGIKIKEDEIK 177 T+ R Y + H +VS+ ++ R+E A E Sbjct: 124 TIASRAYEDSF---AAVAPHTRIVSAPCPQFVDFIERGVVSGPRLEALA-------REYL 173 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +E + DV+VL CTHYPL+ + ++ V + S+ A+ Sbjct: 174 APLEAADV-------DVLVLGCTHYPLLAELIGEVMGPGVRLVSPSEETAK 217 >gi|257459967|ref|ZP_05625071.1| glutamate racemase [Campylobacter gracilis RM3268] gi|257442408|gb|EEV17547.1| glutamate racemase [Campylobacter gracilis RM3268] Length = 400 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 16/218 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK----RLMFLFSDI 71 I FDSGIGGL VL + F+Y AD+ PYG + + + FL S Sbjct: 3 IAFFDSGIGGLSVLAEALQRFSGAEFLYFADEDHVPYGTKSRAEIVRLSLDAVGFLVSRG 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 D V+ACNTA + ELR F S+ +G PA+K AA + +++TP T Sbjct: 63 ADGV-----VVACNTATSAAISELRGAF-SVPVIGMEPAVKLAADSFGARPTLLIATPLT 116 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + L+ +C S+ L R+ E+A ++ ++ + + E R Sbjct: 117 ISGEKLARLVGRL--ECETW---SLAL-PRLVEFAQDLEFDSPAVRAYLSEELAKFELAR 170 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +VL CTH+ V R++ P V +D D R Sbjct: 171 LGSLVLGCTHFNYFKDVLREILPPHVRIIDGIDGTLNR 208 >gi|213861499|ref|ZP_03385969.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 84 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+ Sbjct: 2 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 60 Query: 133 RRTYTSNLIHSYVSQCHIHLVSS 155 +R+YT LI + ++C I ++ S Sbjct: 61 KRSYTHELIARFANECQIEMLGS 83 >gi|15676369|ref|NP_273505.1| glutamate racemase [Neisseria meningitidis MC58] gi|218768777|ref|YP_002343289.1| glutamate racemase [Neisseria meningitidis Z2491] gi|60392794|sp|P0A0Q9|MURI_NEIMA RecName: Full=Glutamate racemase gi|60392795|sp|P0A0R0|MURI_NEIMB RecName: Full=Glutamate racemase gi|6274531|gb|AAF06679.1|AF163663_4 putative glutamate racemase MurI [Neisseria meningitidis] gi|7225684|gb|AAF40895.1| glutamate racemase [Neisseria meningitidis MC58] gi|121052785|emb|CAM09131.1| glutamate racemase [Neisseria meningitidis Z2491] gi|254672785|emb|CBA06865.1| Glutamate racemase [Neisseria meningitidis alpha275] gi|316985801|gb|EFV64744.1| glutamate racemase [Neisseria meningitidis H44/76] gi|319411017|emb|CBY91415.1| glutamate racemase [Neisseria meningitidis WUE 2594] gi|325136845|gb|EGC59443.1| glutamate racemase [Neisseria meningitidis M0579] gi|325140970|gb|EGC63477.1| glutamate racemase [Neisseria meningitidis CU385] gi|325199643|gb|ADY95098.1| glutamate racemase [Neisseria meningitidis H44/76] Length = 270 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|325208730|gb|ADZ04182.1| glutamate racemase [Neisseria meningitidis NZ-05/33] Length = 270 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|320534621|ref|ZP_08035066.1| glutamate racemase [Actinomyces sp. oral taxon 171 str. F0337] gi|320133141|gb|EFW25644.1| glutamate racemase [Actinomyces sp. oral taxon 171 str. F0337] Length = 287 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 12/216 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++D+ Sbjct: 1 MFDSGVGGLTVARSVLDQLPHEQVLYIGDTANGPYGPRDIAEVRSLALSIMDELVDRGVK 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPATL- 132 +L VIACNTA + + R + + + PA + AA T++G + +++T T+ Sbjct: 61 LL-VIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGTVD 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R Y L + + LVS R E A E+ E + Sbjct: 120 SRAYDDAL----QAVPGVELVSQAC--PRFVELAERGVTTGPEVLDVAEEYLAPIKAAGV 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYPL+V + V + +SD A+ Sbjct: 174 DTLILGCTHYPLLVGPISYVMGEDVALVTSSDETAK 209 >gi|50955005|ref|YP_062293.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07] gi|71648716|sp|Q6AEK8|MURI_LEIXX RecName: Full=Glutamate racemase gi|50951487|gb|AAT89188.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 272 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 8/191 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + +R +P +YV D PYG + A +R D+L + Sbjct: 6 IGIFDSGVGGLTVARAIRDQLPNESILYVGDTTHSPYGP-KPIADVRRYSLEVLDLLVEQ 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134 L VIACNTA + + + R + PA+++A A T++G + ++ T T+ R Sbjct: 65 GVKLLVIACNTASSAVLRDARERYAVPVVEVIQPAVRRAVAATRTGRVGVIGTVGTIASR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++ + + L R E+ DE+ + D Sbjct: 125 AYED----AFAAAPDLRLFPRA--CPRFVEFVETGVTSGDEVLRVAAEYLQPLRDADVDT 178 Query: 195 IVLACTHYPLI 205 +VL CTHYP + Sbjct: 179 LVLGCTHYPFL 189 >gi|315655639|ref|ZP_07908537.1| glutamate racemase [Mobiluncus curtisii ATCC 51333] gi|315489703|gb|EFU79330.1| glutamate racemase [Mobiluncus curtisii ATCC 51333] Length = 271 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 17/212 (8%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ++N P I IFDSG+GGL V + + +P IY+ D PYG + Sbjct: 1 MIVNNAP--------IGIFDSGLGGLTVARSIIDQLPGESVIYIGDTANSPYGTKPVERV 52 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAV-PAIKQAAAY 117 K+ + + ++D+ +L VIACNTA RS + + L + PA+ +A + Sbjct: 53 KELSLSVMDKLVDRGVKML-VIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSA 111 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T++G I +++T T+ +H+Y Q + + VE GI + + Sbjct: 112 TRNGHIGVIATHTTIETETYQRALHAY-QQVQVSAKACPAFVDFVER---GITSGPELLA 167 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209 E ++ D +VL CTHYPL+ V Sbjct: 168 VAREYLDPIRDAG-VDTLVLGCTHYPLLSGVI 198 >gi|308388659|gb|ADO30979.1| glutamate racemase [Neisseria meningitidis alpha710] Length = 270 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|319937290|ref|ZP_08011697.1| glutamate racemase [Coprobacillus sp. 29_1] gi|319807656|gb|EFW04249.1| glutamate racemase [Coprobacillus sp. 29_1] Length = 260 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 120/263 (45%), Gaps = 23/263 (8%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I IFDSG+GGL VL ++ +P + IY+ D+ PYG+ H +L+ +I Sbjct: 1 MDKPIGIFDSGVGGLTVLTALQKELPHENMIYIGDNAHCPYGDKTKH----QLLSYTKEI 56 Query: 72 LDKY--QPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D + Q V + V+ACNT + EL+ + + +G + + + I++T Sbjct: 57 CDYFISQNVKMIVLACNTTSANVLAELQELY-QVPVVGVIHSTVHDFLTRKKKCPLIIAT 115 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIE 186 AT+ +I Y I + + L +E +Y GI +++ + Sbjct: 116 HATIESHKYREIIMHYEPDIQIFELETPALVPLIESGQYKKGI--------QDVLEHYFY 167 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYP+++ +++ P +++ +S+SI + L R++ D Sbjct: 168 PYVNKVDSLILGCTHYPIVLEQIKEVFPNK-EYISSSESICQEVASYL-RVHHILNESND 225 Query: 247 DHA--LFLSGKPDIAMRRLMQGF 267 A ++ +G P R +GF Sbjct: 226 SGATVIYTTGDPH-EFRYSSEGF 247 >gi|307298986|ref|ZP_07578788.1| glutamate racemase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915411|gb|EFN45796.1| glutamate racemase [Thermotogales bacterium mesG1.Ag.4.2] Length = 273 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 21/246 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPE-YHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSGIGGL VL+++ +PE F Y AD PYG+ L++ + +F D+ Sbjct: 7 IGVFDSGIGGLTVLKRLVETLPEGVSFHYFADTARVPYGSKPVETLRRYVREIF-DLFAH 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPATLR 133 V ACNT+ +++ ++ F P +++ + + ++I++T T++ Sbjct: 66 LNVDAIVTACNTSDSILTQSDKAELGVPYFSIIDPTVRRIGESAPGNSTVAIIATENTVK 125 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEKEGKR 191 ++ + Y S I + + +EE GI E D I K F E E Sbjct: 126 KSLYLRKLFRYESFSKIVQKACPLFVPLIEE---GIWEGEIVDSIVKYYLNDFAEIE--- 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR----ARCLLPRINT------HQ 241 D ++L CTHYP I + + P +D S+ I R A L P +T Sbjct: 180 PDFMILGCTHYPFIKNSIERFLPSKTKVVDPSEYIVRDVADWATILSPEPSTVDYYVSGN 239 Query: 242 TRVFDD 247 TR+F D Sbjct: 240 TRIFQD 245 >gi|325138826|gb|EGC61377.1| glutamate racemase [Neisseria meningitidis ES14902] Length = 270 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|116872608|ref|YP_849389.1| glutamate racemase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466205|sp|A0AHX8|MURI_LISW6 RecName: Full=Glutamate racemase gi|116741486|emb|CAK20610.1| glutamate racemase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 266 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 26/273 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ +L VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATKNNKIGVLGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + ++ S VE EY I KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238 + D ++L CTHYPL+ + V +++ + A LL N Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDGVSVINSGEETASEVSALLDYHNLLDATDEEIE 232 Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266 T T++F D A PD+ + + G Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMIVEHIKLG 265 >gi|315656446|ref|ZP_07909335.1| glutamate racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493005|gb|EFU82607.1| glutamate racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 271 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 50/292 (17%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ++N P I IFDSG+GGL V + + +P Y+ D PYG + Sbjct: 1 MIVNNAP--------IGIFDSGLGGLTVARSIIDQLPGESVTYIGDTANSPYGTKPVERV 52 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAV-PAIKQAAAY 117 K+ + + ++D+ +L VIACNTA RS + + L + PA+ +A + Sbjct: 53 KELSLSVMDKLVDRGVKML-VIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSA 111 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T++G I +++T T+ +H+Y Q + + VE GI + + Sbjct: 112 TRNGHIGVIATHTTIETETYQRALHAY-QQVQVSAKACPAFVDFVER---GITSGPELLA 167 Query: 178 KEIEGCFIEK-EGKRTDVIVLACTHYPLIV----------------------HVFRQLSP 214 E ++E D +VL CTHYPL+ V+RQL Sbjct: 168 VARE--YLEPIRDAGVDTLVLGCTHYPLLSGIISYVMGPEVTLVSSAEETAHDVYRQL-- 223 Query: 215 WPVDWLDNSDSIARRARCLLPR---INTHQTRVFDDHALFLSGKPDIAMRRL 263 DWL+ D A + PR + T T+ F A G A+ R+ Sbjct: 224 LDKDWLNTDDG----ADTVNPRYQFLATGDTQTFTRLARRFLGPEVTAVERV 271 >gi|305680741|ref|ZP_07403548.1| glutamate racemase [Corynebacterium matruchotii ATCC 14266] gi|305658946|gb|EFM48446.1| glutamate racemase [Corynebacterium matruchotii ATCC 14266] Length = 288 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKI N + I IFDSG+GGL V + + +P Y+ D PYG + Sbjct: 21 MKITN-------NSPIGIFDSGVGGLTVARTIMEQLPGESITYIGDTAHSPYGPLPIAEV 73 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +K + + +++++ +L VIACNTA + R + PA+++A A T++ Sbjct: 74 RKHALRIADELVERGSKML-VIACNTASAACLRDARERYDVPVIEVIHPAVRRAVATTRN 132 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G I ++ T T+ +L S I + VE GI + + Sbjct: 133 GRIGVIGTSGTINSGAYQDLF-SVNPNVEITAQACPRFVDFVER---GITSGRQILG--V 186 Query: 181 EGCFIEK-EGKRTDVIVLACTHYPLIVHVFR 210 +IE + D +VL CTHYPL+ V + Sbjct: 187 AQAYIEPLQTAGVDTLVLGCTHYPLLSGVIQ 217 >gi|227529708|ref|ZP_03959757.1| glutamate racemase [Lactobacillus vaginalis ATCC 49540] gi|227350374|gb|EEJ40665.1| glutamate racemase [Lactobacillus vaginalis ATCC 49540] Length = 266 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 30/240 (12%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V++ ++ +P ++V D+ FPYG + L + Sbjct: 1 MDNRP--------IGVMDSGLGGLSVIRVIQQELPNESVVFVGDEGHFPYGT-KSQELIR 51 Query: 63 RLMFLFSDILDKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +L+ L QPV L VIACNTA ++ P + +G + AA +++ Sbjct: 52 QLVLRIGRFL-VAQPVKLMVIACNTATAAALSTVQKELP-IPVIGVINPGATAAIESKAS 109 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQC-----HIHLVSSMI--LASRVEEYACGIKIKED 174 I +++T +T + +YV + H+ ++S L + VE G Sbjct: 110 RIGVIATESTTKDG-------AYVRELKKLDPHVKVISKATQPLVAIVEHGKTGTA---- 158 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 E +K ++ + + D ++L CTH+P + + Q V +D + + + LL Sbjct: 159 EAQKTVDQQLASFDQEPVDALILGCTHFPFLANEISQKMGKKVKLIDPALETVNQVKKLL 218 >gi|254805513|ref|YP_003083734.1| glutamate racemase MurI [Neisseria meningitidis alpha14] gi|254669055|emb|CBA07540.1| glutamate racemase MurI [Neisseria meningitidis alpha14] Length = 327 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 122 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 183 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 238 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 239 IDTLVLGCTHFPLL 252 >gi|257063632|ref|YP_003143304.1| glutamate racemase [Slackia heliotrinireducens DSM 20476] gi|256791285|gb|ACV21955.1| glutamate racemase [Slackia heliotrinireducens DSM 20476] Length = 307 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 30/242 (12%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 DN P I +FDSG GGL +++ LMP +Y D PYG + + Sbjct: 21 DNAP--------IGVFDSGYGGLTCAREIAELMPNESIVYFGDTARCPYGPRDQAEVDLF 72 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122 + + + ++DK +L VIACNTA + + TF S+ LGAV P + AA T++ Sbjct: 73 VQQIGAWLMDKGVKML-VIACNTATAAGLEHAQQTF-SVPILGAVEPGARAAARTTKNRK 130 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE---DEIKKE 179 + ++ T T+ I + + + ++ VE GI++ + +++ Sbjct: 131 VGVIGTKGTIESGCYPRAIRNIDAGITVFSTATPRFVEIVEN---GIRLAKGPFEDLTSS 187 Query: 180 IEGCFIEKEGK-------------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 + +I E + D +VLACTHYP++ + + V + +++ + Sbjct: 188 VSKVYIRPEFRTIAIEYLEPLRRCEIDTLVLACTHYPMLKALIGGVIGTNVRLVSSAEEL 247 Query: 227 AR 228 A+ Sbjct: 248 AK 249 >gi|299535537|ref|ZP_07048858.1| glutamate racemase [Lysinibacillus fusiformis ZC1] gi|298728737|gb|EFI69291.1| glutamate racemase [Lysinibacillus fusiformis ZC1] Length = 265 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 12/243 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V +++ +P Y+ D PYG ++ + + L+K Sbjct: 5 IGVIDSGVGGLTVAKEIMKRLPNETIYYIGDTARCPYGPRSRQEVRN-FTWQMAKALEKM 63 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134 + VIACNTA + + L+ P LG + A +AA T+ + +L+T T++ Sbjct: 64 NVKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEGTIKS 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + S + HI ++ VE EY K D I + ++ Sbjct: 123 GAYEEALLSLNTSTHIIPLACPTFVPLVESGEY------KGDFANNLIAEGLKPLKNRQF 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251 D ++L CTHYP++ + V+ L +++ A+ + +L T H F Sbjct: 177 DTVILGCTHYPILQKQIEAVVGEDVNVLSSAEETAKDVQEMLAYNGTLANANAVPAHRFF 236 Query: 252 LSG 254 +G Sbjct: 237 ATG 239 >gi|227504002|ref|ZP_03934051.1| glutamate racemase [Corynebacterium striatum ATCC 6940] gi|227199396|gb|EEI79444.1| glutamate racemase [Corynebacterium striatum ATCC 6940] Length = 258 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 10/217 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V + + +P IY+ D PYG +++ L +D L Sbjct: 6 SPIGIFDSGVGGLTVARTIIEQLPNESVIYIGDTEHSPYGPRPIAEVRE-LSTKIADELV 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + VIACNTA + R + PA+++A A T++G I ++ T T+ Sbjct: 65 ERGCKMIVIACNTATAAFLHDARERYDIPVVEVIRPAVRRAIATTRNGKIGVIGTEGTVN 124 Query: 134 RTYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +L + H+ H V+ VE GI +I EG + Sbjct: 125 SGAYQDL---FAVNPHVEAHAVACPDFVGFVER---GITAGR-QILGVAEGYLAPLQSVG 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYPL+ V + V + +++ A+ Sbjct: 178 VDTLVLGCTHYPLLTGVIQLAMGDNVTLVSSAEETAK 214 >gi|325134824|gb|EGC57460.1| glutamate racemase [Neisseria meningitidis M13399] Length = 270 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT ++ ++R +M L + A +AA + T++ I I++T T Sbjct: 66 LEHDVKAMVIACNTIAAVVGQKIRQKTGNMPVLDVISAGAKAALSTTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|228957263|ref|ZP_04119029.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802454|gb|EEM49305.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 265 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 7/238 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA EL+ S+ +G + P + A T+ I ++ T T++ Sbjct: 60 KALVVACNTAAATALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 +H + +H + LA+ VE I ++K+ + + D ++ Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENRLEDIAYVTQQVKQ----ALLPLTKEDIDTLI 174 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 232 >gi|315443407|ref|YP_004076286.1| glutamate racemase [Mycobacterium sp. Spyr1] gi|315261710|gb|ADT98451.1| glutamate racemase [Mycobacterium sp. Spyr1] Length = 278 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 7/191 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ IYV D PYG ++ + + D+ + Sbjct: 9 IGIFDSGVGGLTVARAVIDQLPDEDIIYVGDTGNGPYGPLTIPQIRAHALAIGDDLAGRG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L VIACN+A + + R + + + + PA+++A A T++G I ++ T AT+ Sbjct: 69 IKAL-VIACNSASSACLRDARERYAPIPVVEVILPAVRRAVAATRNGRIGVIGTAATI-- 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + S+ + I + + R ++ ++ E + + D Sbjct: 126 -ASGAYQDSFAAARDIEVFG--VACPRFVDFVERGVTSGRQVLGLAEAYLEPLQRAQVDT 182 Query: 195 IVLACTHYPLI 205 +VL CTHYP++ Sbjct: 183 LVLGCTHYPML 193 >gi|120405243|ref|YP_955072.1| glutamate racemase [Mycobacterium vanbaalenii PYR-1] gi|119958061|gb|ABM15066.1| glutamate racemase [Mycobacterium vanbaalenii PYR-1] Length = 281 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 7/191 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ IY+ D PYG ++ + + D+ + Sbjct: 12 IGIFDSGVGGLTVARAVIDQLPDEDIIYIGDTGNGPYGPLTIPEIRAHALAIGDDLAGRG 71 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L VIACN+A + + R + + + + PA+++A A T++G I ++ T AT+ Sbjct: 72 IKAL-VIACNSASSACLRDARERYAPIPVVEVILPAVRRAVATTRNGRIGVIGTAATI-- 128 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + ++ + I + + R ++ ++ EG + D Sbjct: 129 -ASGAYQDTFAAARDIEVFG--VACPRFVDFVERGVTSGRQVLGLAEGYLEPLQRAEVDT 185 Query: 195 IVLACTHYPLI 205 +VL CTHYP++ Sbjct: 186 LVLGCTHYPML 196 >gi|311743615|ref|ZP_07717421.1| glutamate racemase [Aeromicrobium marinum DSM 15272] gi|311312745|gb|EFQ82656.1| glutamate racemase [Aeromicrobium marinum DSM 15272] Length = 272 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 8/222 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL V + + +P +Y+ D PYG +++ + ++D Sbjct: 6 IGIFDSGFGGLTVARAVLDQLPHESVLYLGDTARQPYGPLPISQVREYALDCLDHLVDHG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT-LRR 134 L VIACN+A + + R + VPA ++A T++G + ++ T +T R Sbjct: 66 VKAL-VIACNSASAAVLRDARERYAVPVVEVIVPATRRAVNATRNGRVGVICTQSTATSR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y + + H VE G+ E+ I E KE D Sbjct: 125 AYDDAFAANPSIELHTRACPRF-----VEFVEAGVTGGEELITVAREYLAPLKEAG-VDT 178 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 +VL CTHYPL+ V + V + +++ A+ LL R Sbjct: 179 LVLGCTHYPLLTGVVSYVMGDTVTLVSSAEETAKDVFALLAR 220 >gi|225021576|ref|ZP_03710768.1| hypothetical protein CORMATOL_01597 [Corynebacterium matruchotii ATCC 33806] gi|224945567|gb|EEG26776.1| hypothetical protein CORMATOL_01597 [Corynebacterium matruchotii ATCC 33806] Length = 288 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKI N + I IFDSG+GGL V + + +P Y+ D PYG + Sbjct: 21 MKITN-------NSPIGIFDSGVGGLTVARTIMEQLPGESITYIGDTAHSPYGPLPIAEV 73 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +K + + +++++ +L VIACNTA + R + PA+++A A T++ Sbjct: 74 RKHALRIADELVERGSKML-VIACNTASAACLRDARERYDVPVIEVIHPAVRRAVATTRN 132 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G I ++ T T+ +L S I + VE GI + + Sbjct: 133 GRIGVIGTSGTINSGAYQDLF-SVNPNVEITAQACPRFVDFVER---GITSGRQILG--V 186 Query: 181 EGCFIEK-EGKRTDVIVLACTHYPLIVHVFR 210 +IE + D +VL CTHYPL+ V + Sbjct: 187 AQAYIEPLQTAGVDTLVLGCTHYPLLSGVIQ 217 >gi|16803277|ref|NP_464762.1| glutamate racemase [Listeria monocytogenes EGD-e] gi|46907456|ref|YP_013845.1| glutamate racemase [Listeria monocytogenes serotype 4b str. F2365] gi|47097378|ref|ZP_00234930.1| glutamate racemase [Listeria monocytogenes str. 1/2a F6854] gi|224499092|ref|ZP_03667441.1| glutamate racemase [Listeria monocytogenes Finland 1988] gi|224503808|ref|ZP_03672115.1| glutamate racemase [Listeria monocytogenes FSL R2-561] gi|226223837|ref|YP_002757944.1| glutamate racemase [Listeria monocytogenes Clip81459] gi|254823509|ref|ZP_05228510.1| racE [Listeria monocytogenes FSL J1-194] gi|254828597|ref|ZP_05233284.1| glutamate racemase [Listeria monocytogenes FSL N3-165] gi|254830009|ref|ZP_05234664.1| glutamate racemase [Listeria monocytogenes 10403S] gi|254852894|ref|ZP_05242242.1| racE [Listeria monocytogenes FSL R2-503] gi|254898602|ref|ZP_05258526.1| glutamate racemase [Listeria monocytogenes J0161] gi|254932885|ref|ZP_05266244.1| racE [Listeria monocytogenes HPB2262] gi|254936234|ref|ZP_05267931.1| racE [Listeria monocytogenes F6900] gi|254993152|ref|ZP_05275342.1| glutamate racemase [Listeria monocytogenes FSL J2-064] gi|255025221|ref|ZP_05297207.1| glutamate racemase [Listeria monocytogenes FSL J2-003] gi|255522515|ref|ZP_05389752.1| glutamate racemase [Listeria monocytogenes FSL J1-175] gi|284801557|ref|YP_003413422.1| hypothetical protein LM5578_1310 [Listeria monocytogenes 08-5578] gi|284994699|ref|YP_003416467.1| hypothetical protein LM5923_1263 [Listeria monocytogenes 08-5923] gi|290893281|ref|ZP_06556267.1| racE protein [Listeria monocytogenes FSL J2-071] gi|300764386|ref|ZP_07074380.1| glutamate racemase [Listeria monocytogenes FSL N1-017] gi|20177977|sp|Q8Y7N7|MURI_LISMO RecName: Full=Glutamate racemase gi|67460886|sp|Q720J2|MURI_LISMF RecName: Full=Glutamate racemase gi|259509916|sp|C1L2E2|MURI_LISMC RecName: Full=Glutamate racemase gi|16410653|emb|CAC99315.1| racE [Listeria monocytogenes EGD-e] gi|46880724|gb|AAT04022.1| glutamate racemase [Listeria monocytogenes serotype 4b str. F2365] gi|47014250|gb|EAL05231.1| glutamate racemase [Listeria monocytogenes str. 1/2a F6854] gi|225876299|emb|CAS05008.1| Putative glutamate racemase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600995|gb|EEW14320.1| glutamate racemase [Listeria monocytogenes FSL N3-165] gi|258606229|gb|EEW18837.1| racE [Listeria monocytogenes FSL R2-503] gi|258608824|gb|EEW21432.1| racE [Listeria monocytogenes F6900] gi|284057119|gb|ADB68060.1| hypothetical protein LM5578_1310 [Listeria monocytogenes 08-5578] gi|284060166|gb|ADB71105.1| hypothetical protein LM5923_1263 [Listeria monocytogenes 08-5923] gi|290557089|gb|EFD90617.1| racE protein [Listeria monocytogenes FSL J2-071] gi|293584439|gb|EFF96471.1| racE [Listeria monocytogenes HPB2262] gi|293592729|gb|EFG00490.1| racE [Listeria monocytogenes FSL J1-194] gi|300515038|gb|EFK42091.1| glutamate racemase [Listeria monocytogenes FSL N1-017] gi|313609160|gb|EFR84843.1| glutamate racemase [Listeria monocytogenes FSL F2-208] gi|328466631|gb|EGF37766.1| glutamate racemase [Listeria monocytogenes 1816] gi|328475255|gb|EGF46036.1| glutamate racemase [Listeria monocytogenes 220] gi|332311623|gb|EGJ24718.1| Glutamate racemase [Listeria monocytogenes str. Scott A] Length = 266 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 26/273 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ +L VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + ++ S VE EY I KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238 + D ++L CTHYPL+ + V +++ + A LL N Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIE 232 Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266 T T++F D A PD+ + + G Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLG 265 >gi|328956948|ref|YP_004374334.1| glutamate racemase [Carnobacterium sp. 17-4] gi|328673272|gb|AEB29318.1| glutamate racemase [Carnobacterium sp. 17-4] Length = 272 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 11/229 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I DSG+GGL V+++ +P YV D PYG + + + + +L Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEEQILQFTWEMTHFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 +K +L VIACNTA + ++L+ ++ +G + P + A T++ I I+ T T Sbjct: 63 NKDIKML-VIACNTATAVALEDLKKKL-AIPIIGVILPGSRAAIKATKNNRIGIIGTEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ +I S + + ++ VE EY I KK + + Sbjct: 121 IKSDKYRKMIRSKDTLASVESLACPKFVPLVESNEYDSAIA------KKIVTETLKPIKN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 K D +VL CTHYPL+ + + V +D+ +L N Sbjct: 175 KNIDTLVLGCTHYPLLRPIIQNFMGDSVTLIDSGAETISEVSTILDYFN 223 >gi|307243173|ref|ZP_07525346.1| glutamate racemase [Peptostreptococcus stomatis DSM 17678] gi|306493434|gb|EFM65414.1| glutamate racemase [Peptostreptococcus stomatis DSM 17678] Length = 270 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 15/224 (6%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL VL+++ +P IY D PYG+ + K F + L Sbjct: 5 AIGVFDSGLGGLTVLKEINKYLPNEDTIYFGDTARVPYGSRSKETIIK-YTFQAINFLAS 63 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATLR 133 VIACNTA E R + + +G + A + A Y T++ ++ ++ T AT+R Sbjct: 64 QNVKAIVIACNTASARALLEAREEY-DIPIMGVIEAGARTAVYSTRNKVVGVIGTTATVR 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + I + S + + I VEE +I ++ +E K D Sbjct: 123 SKAYNKAIKAKDSGIRVIGKACPIFVPLVEEGWSNKEISTMAAHMYLD-SLVE---KGID 178 Query: 194 VIVLACTHYPLIVHVFRQ--------LSPWPVDWLDNSDSIARR 229 +VL CTHYP++ + ++P LD D + +R Sbjct: 179 SLVLGCTHYPILKRTIGEVVGKDVKLINPAKETALDLKDVLEKR 222 >gi|320012326|gb|ADW07176.1| Glutamate racemase [Streptomyces flavogriseus ATCC 33331] Length = 279 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 84/196 (42%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + +R + + + Sbjct: 19 IALMDSGIGLLAAAAAVRRLRPDADLVLSSDPGSMPWGPRTPEDVTRRALAVAQ-AAAAH 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ P + +G VPAIK AAA G +I +TPAT Sbjct: 78 RPDALIVACNTASVHALPTLRAELEPGLPVIGTVPAIKPAAA--GGGPFAIWATPATTGS 135 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI+ + + V LA VE E I + + TDV Sbjct: 136 PYQRGLINDFARAVDVTEVPCPGLADAVEHA------DEQGIDRAVAAAAALTPPDVTDV 189 Query: 195 IVLACTHYPLIVHVFR 210 VL CTHY L+ R Sbjct: 190 -VLGCTHYELVAERIR 204 >gi|116327584|ref|YP_797304.1| glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331805|ref|YP_801523.1| glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280458|sp|Q04QQ5|MURI_LEPBJ RecName: Full=Glutamate racemase gi|122284619|sp|Q053X4|MURI_LEPBL RecName: Full=Glutamate racemase gi|116120328|gb|ABJ78371.1| Glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125494|gb|ABJ76765.1| Glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 258 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 14/214 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL VL+ + E +Y D PYG E ++ L D+ + Sbjct: 7 IGLMDSGMGGLSVLKGILKYDAELEVVYYGDLKNSPYGEKETS----EILELVRDVCKRL 62 Query: 76 QP---VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Q ++ACNTA + LR F S+ G PAIK A I++L+TP T Sbjct: 63 QEENVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKIALLATPVTQ 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L ++ I VS LA V+ K + DE +K + + + Sbjct: 122 REKKLQRLKAELGAEELILPVSCPGLAGLVD------KGEFDEAEKYLRPILKKLREENV 175 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 + +VL CTHY + H+ + P + NS +I Sbjct: 176 ENLVLGCTHYIFLKHIILKNFPNVRIYDGNSGTI 209 >gi|241759734|ref|ZP_04757834.1| glutamate racemase [Neisseria flavescens SK114] gi|241319742|gb|EER56138.1| glutamate racemase [Neisseria flavescens SK114] Length = 269 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + L VIACNT + ++ +M L + A +AA T++ I I++T T Sbjct: 66 ENDVKAL-VIACNTIAAVAGQKILQKAGNMPVLDVISAGAEAALQTTKNNRIGIIATNTT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IHS + + ++ +L VEE ++ +++ ++ + Sbjct: 125 VNSNAYARAIHSKNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLADD---- 180 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 181 IDTLVLGCTHFPLL 194 >gi|217964697|ref|YP_002350375.1| glutamate racemase [Listeria monocytogenes HCC23] gi|254766118|sp|B8DHZ5|MURI_LISMH RecName: Full=Glutamate racemase gi|217333967|gb|ACK39761.1| glutamate racemase [Listeria monocytogenes HCC23] gi|307570742|emb|CAR83921.1| racE [Listeria monocytogenes L99] Length = 266 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 26/273 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ +L VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + ++ S VE EY I KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238 + D ++L CTHYPL+ + V +++ + A LL N Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDSTDEEIE 232 Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266 T T++F D A PD+ + + G Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLG 265 >gi|322390073|ref|ZP_08063608.1| glutamate racemase [Streptococcus parasanguinis ATCC 903] gi|321143200|gb|EFX38643.1| glutamate racemase [Streptococcus parasanguinis ATCC 903] Length = 264 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K ++ V+ACNTA ++ +E++ + LG + P A T Sbjct: 53 YTWQMVNFLLTKNVKMI-VLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I S + ++ VE + + + + ++ Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMEVSSLACPKFVPLVESNELASSVTKKVVYETLK 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|325130825|gb|EGC53559.1| glutamate racemase [Neisseria meningitidis OX99.30304] Length = 270 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG + A + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGT-KSKATIEHFSMQIVDFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|86606820|ref|YP_475583.1| glutamate racemase [Synechococcus sp. JA-3-3Ab] gi|86555362|gb|ABD00320.1| glutamate racemase [Synechococcus sp. JA-3-3Ab] Length = 292 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 21/198 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I +FDSG+GGL V + +R +P+ +Y AD PYG D + ++ L F+ IL Sbjct: 15 IGVFDSGLGGLTVWRALRRRLPQERLVYFADTARLPYG---DRSAEEILTFV-RQILRWM 70 Query: 74 KYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + QPV + V+ACNT+ L ++++ F ++ LG + Q AA Q I +++T AT+ Sbjct: 71 QAQPVKVVVMACNTSSALALEQVQQEF-ALPILGLILPGAQ-AALAQGSRIGVIATAATV 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCF 184 + S I Y + + + E AC ++ E+++ E Sbjct: 129 KSRAYSKAIQEYSALDPRRFPQPV----QCWEQACPEFVPLIEAGQLDGPELRQAAERYL 184 Query: 185 IEKEGKRTDVIVLACTHY 202 + D +V CTHY Sbjct: 185 QPLLQQGIDTLVYGCTHY 202 >gi|315302795|ref|ZP_07873560.1| glutamate racemase [Listeria ivanovii FSL F6-596] gi|313628832|gb|EFR97200.1| glutamate racemase [Listeria ivanovii FSL F6-596] Length = 266 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 26/273 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + +++ + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQIYYLGDTARCPYGPRDKEEVRQFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ +L VIACNTA ++R+ + +G + P + A T++ I +L T Sbjct: 61 VDRGIKML-VIACNTATAAALYDIRAKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + ++ S VE EY I KK + + + Sbjct: 119 TVESMAYPRALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238 + D ++L CTHYPL+ + V +++ + A LL N Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDDVAVINSGEETASEVSALLDYHNLLDASDKEIQ 232 Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266 T T++F D A P++ + + G Sbjct: 233 HRFFTTGSTQIFQDIAXXWLNMPEMTVEHIKLG 265 >gi|312868338|ref|ZP_07728538.1| glutamate racemase [Streptococcus parasanguinis F0405] gi|311096083|gb|EFQ54327.1| glutamate racemase [Streptococcus parasanguinis F0405] Length = 264 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K ++ V+ACNTA ++ +E++ + LG + P A T Sbjct: 53 YTWQMVNFLLTKNVKMI-VLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I S + ++ VE + + + + ++ Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMEVSSLACPKFVPLVESNELASSVTKKVVYETLK 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|269213840|ref|ZP_05982968.2| glutamate racemase [Neisseria cinerea ATCC 14685] gi|269145167|gb|EEZ71585.1| glutamate racemase [Neisseria cinerea ATCC 14685] Length = 293 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG + A + D L Sbjct: 30 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGT-KSKATIEHFSMQIVDFL 88 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 89 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 148 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 149 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 204 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 205 IDTLVLGCTHFPLL 218 >gi|226365519|ref|YP_002783302.1| glutamate racemase [Rhodococcus opacus B4] gi|226244009|dbj|BAH54357.1| glutamate racemase [Rhodococcus opacus B4] Length = 257 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 106/246 (43%), Gaps = 20/246 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L PE I D G P+G + + R++ +D+ Sbjct: 3 VALIDSGLGMLPTAAWLRKLRPELDLILALDPDGAPWGPKPEQWVIDRVLATAQRSVDRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ V+ CNTA D +R P + +G VPAIK AAA S + + R Sbjct: 63 AEVI-VLPCNTASVTALDHVREFVGPQVPVVGTVPAIKPAAAAFASVAVWATAATTASR- 120 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++LI + + + V+ LA ++ E E E+ Sbjct: 121 -YQADLIEKFGNGSSVVGVACHGLAEAIDR-------GEREAAAAAIASAAERTPGDVGA 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA----RRARCLLPRINTHQTRVFDDHAL 250 +VL CTHYPL+ P V D+++++A RR L R +T + V + Sbjct: 173 VVLGCTHYPLMADEIAARLPAGVRLFDSAEAVAAQTLRRIDALN-RPSTGEGTV----EV 227 Query: 251 FLSGKP 256 FLSG+P Sbjct: 228 FLSGRP 233 >gi|313206123|ref|YP_004045300.1| glutamate racemase [Riemerella anatipestifer DSM 15868] gi|312445439|gb|ADQ81794.1| glutamate racemase [Riemerella anatipestifer DSM 15868] gi|315022930|gb|EFT35953.1| glutamate racemase [Riemerella anatipestifer RA-YM] gi|325336432|gb|ADZ12706.1| Glutamate racemase [Riemerella anatipestifer RA-GD] Length = 271 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 11/234 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL V ++++ MP + IY D PYG+ A+ R ++ L Sbjct: 9 QQPIGVFDSGVGGLTVAKEIKRQMPHENIIYFGDTKHLPYGDKSKEAI-VRFSEKIAEFL 67 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPAT 131 + VIACN+A E++ + A + V + + AY + +++T AT Sbjct: 68 LEQNCKAIVIACNSATANALKEVKELVGNRAIVFDVVNPVAEKIAYEIHTNVGVIATKAT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-K 190 + I + + +++ +L +EE K I I ++ K Sbjct: 128 VNAGIYKKSIRRFNKFIKVDELATPLLVPAIEE-----GFKNHPITHSILYHYLSNSKLK 182 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQ 241 + ++L CTHYPL++ +Q V +D+ +A + L + +N+ Q Sbjct: 183 NIETLILGCTHYPLLLEEIKQYYGSRVRVIDSPSIVANYIKISLEKHHLLNSEQ 236 >gi|239787442|emb|CAX83914.1| Glutamate racemase [uncultured bacterium] Length = 277 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 11/217 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ + P FIY+ D PYG +++ + + +L + Sbjct: 10 IGIFDSGVGGLTVLKALVSRFPHERFIYLGDTARVPYGTKSARTVERYSIQVADCLLARG 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIK----QAAAYTQSGLISILSTPA 130 L V+ACNTA L + L+S P+ LG + P + AA + G + ++ T + Sbjct: 70 VKGL-VVACNTASALGMEALKSHSPT-PILGVIEPGCRAAGALAAGLGRPGKVGVIGTRS 127 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + ++ + VEE +++ ++ +E + Sbjct: 128 TVASGAYPAQLSRLDPGIEVFSLACPLFVPLVEEG----WLEQPAVRLIVEESLSPFLDQ 183 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 R D ++L CTHYPL+ V ++ V +D++ ++A Sbjct: 184 RLDALILGCTHYPLLAPVIAEVMGSAVPLVDSATAVA 220 >gi|313667842|ref|YP_004048126.1| glutamate racemase [Neisseria lactamica ST-640] gi|313005304|emb|CBN86737.1| glutamate racemase [Neisseria lactamica 020-06] gi|325202734|gb|ADY98188.1| glutamate racemase [Neisseria meningitidis M01-240149] Length = 270 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|309378294|emb|CBX23082.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|325144995|gb|EGC67278.1| glutamate racemase [Neisseria meningitidis M01-240013] Length = 270 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|255324315|ref|ZP_05365436.1| glutamate racemase [Corynebacterium tuberculostearicum SK141] gi|255298645|gb|EET77941.1| glutamate racemase [Corynebacterium tuberculostearicum SK141] Length = 259 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 22/205 (10%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V + + +P IY D PYG ++ + +++ Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPHESVIYTGDTAHSPYGPRPISEVRAFSQDVADRLVE 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + +L VIACNTA + R + PA+++A + T++G I ++ T T++ Sbjct: 66 RGCKML-VIACNTATAAFLHDARERYDIPIVEVIRPAVRRAMSTTRNGKIGVIGTEGTIK 124 Query: 134 RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 +L + ++ + C + V I A R +I EG Sbjct: 125 SGAYQDLFALNPKVQAFATACPDFVPFVERGITAGR-------------QILGVAEGYLA 171 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFR 210 + + D +VL CTHYPL+ + + Sbjct: 172 PLQEQGVDTLVLGCTHYPLLTGIIQ 196 >gi|78043344|ref|YP_359176.1| glutamate racemase [Carboxydothermus hydrogenoformans Z-2901] gi|123577026|sp|Q3AFA8|MURI_CARHZ RecName: Full=Glutamate racemase gi|77995459|gb|ABB14358.1| glutamate racemase [Carboxydothermus hydrogenoformans Z-2901] Length = 265 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 17/219 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD- 73 I IFDSG+GG+ VL+++ L+P +F Y+ D PYG+ K+ L+ L I+ Sbjct: 7 GIGIFDSGVGGVTVLKELINLLPGENFYYLGDTAHVPYGSKS----KEELLILGDAIIRF 62 Query: 74 --KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 K + V ACNT+ + L+ +P + P K A + G +L+T AT Sbjct: 63 FLKLGVKMVVFACNTSSAITLPILKERYPVLMEGMLEPLRKNMPAKAKVG---VLATEAT 119 Query: 132 LRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 ++ Y L+ + Q +++++ +E+ K E+ ++ E KE Sbjct: 120 VKSGLYQKKLMETNKFQ-EVYMIACPQYVPLIEKGIVSGKEVEEATREYFEPLL--KEEV 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 R +VL CTHYP + ++L P + +D + +AR Sbjct: 177 RD--VVLGCTHYPFLTETIQKLYP-KIQVIDPAAYVARE 212 >gi|255994482|ref|ZP_05427617.1| glutamate racemase [Eubacterium saphenum ATCC 49989] gi|255993195|gb|EEU03284.1| glutamate racemase [Eubacterium saphenum ATCC 49989] Length = 267 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 7/220 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSG+GGL + + +P IY D PYG+ + +R D L + Sbjct: 9 FDSGLGGLTCIASVSRRLPHEDIIYFGDTARTPYGSKSVKTI-QRFSAEICDFLLQKNVK 67 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATLRRTY 136 + VIACN+ LR + + +G + + + A + I I+ T AT+ Sbjct: 68 MIVIACNSVSATSLGFLREKYKDIPIVGIIESAAEKAIDDAKEGNKIGIIGTKATISSMA 127 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 N+I V + + +EE I +K ++ E R + +V Sbjct: 128 YKNIIEQSVEGADVAQKACPAFVPLIEEGIIENDIMNLSVKYYLDHFIAE---NRINTLV 184 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 L CTHYP I + ++ P + +D SD ++R+ +L + Sbjct: 185 LGCTHYPFIANNIKRNYPN-LKLIDPSDEVSRQIEKILKK 223 >gi|229815852|ref|ZP_04446176.1| hypothetical protein COLINT_02906 [Collinsella intestinalis DSM 13280] gi|229808547|gb|EEP44325.1| hypothetical protein COLINT_02906 [Collinsella intestinalis DSM 13280] Length = 297 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 15/241 (6%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + + I +FDSG+GGL V + + +P YV D PYG + ++ + Sbjct: 7 RDCERPIGVFDSGLGGLTVARCIATSLPHESIYYVGDTKRCPYGVRPEEEVRS-FVLQAG 65 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L +++ + VIACNTA + P P + A T++ + +L+TP Sbjct: 66 RWLAEHEVKIMVIACNTATAAGLRIAQQVLPVPVIGVIAPGARAAINSTRTRKVGVLATP 125 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKED-----------EIK 177 T+R + I + ++ + VE E A G ++E E + Sbjct: 126 LTVRTGAYTRAIQDLDAGVDVYGCPAPSFVEIVEHELATGAHLQERWLQNGDIFDTLENR 185 Query: 178 KEIEGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 E+E I G + D +VL CTH+PL+ R V + +++ R +L Sbjct: 186 VEVERTLAPIISGGAQVDTVVLGCTHFPLLAGPIRHALGPDVRVVSSAEETTRELEDILS 245 Query: 236 R 236 R Sbjct: 246 R 246 >gi|94993693|ref|YP_601791.1| glutamate racemase [Streptococcus pyogenes MGAS10750] gi|306827957|ref|ZP_07461224.1| glutamate racemase [Streptococcus pyogenes ATCC 10782] gi|166231060|sp|Q1J8B4|MURI_STRPF RecName: Full=Glutamate racemase gi|94547201|gb|ABF37247.1| Glutamate racemase [Streptococcus pyogenes MGAS10750] gi|304429876|gb|EFM32918.1| glutamate racemase [Streptococcus pyogenes ATCC 10782] Length = 264 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 28/252 (11%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + + Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V ACNTA + +E+++ + LG V P A T G + ++ TP T Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190 + S + + I L++ + +V AC + I E I K+I + Sbjct: 121 ---VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVG 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246 + D +VL CTHYPL+ + + + V +D+ R LL N HQ V Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232 Query: 247 DHALFLSGKPDI 258 +H F + +I Sbjct: 233 EHRFFTTANSEI 244 >gi|300789525|ref|YP_003769816.1| glutamate racemase [Amycolatopsis mediterranei U32] gi|299799039|gb|ADJ49414.1| glutamate racemase [Amycolatopsis mediterranei U32] Length = 257 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 8/251 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P YV D PYG + + ++++ Sbjct: 1 MFDSGVGGLTVARAILEQLPAEQLRYVGDTAHNPYGPLPIATARSYALAALDELVESGVK 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-RTY 136 L VIACNTA + R + +PA+++A T +G + ++ T T+R R Y Sbjct: 61 AL-VIACNTASAACLRDARERYDVPVIEVVLPAVRRAVVATHTGRVGVIGTEGTVRSRAY 119 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 ++ + I L S + R ++ ++ +G + D +V Sbjct: 120 ED----AFAAAPAITLTS--VACPRFVDFVERGITTGRQVLGLAQGYLQPLLDAQVDTLV 173 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHYPL+ V + + V + ++D A+ +L + TR FL+ Sbjct: 174 LGCTHYPLLQGVLQIVMGQEVTLVSSADETAKDLVRVLTEGDLLTTRDTPPRHEFLATGS 233 Query: 257 DIAMRRLMQGF 267 RL Q F Sbjct: 234 AEPFTRLAQRF 244 >gi|284037266|ref|YP_003387196.1| glutamate racemase [Spirosoma linguale DSM 74] gi|283816559|gb|ADB38397.1| glutamate racemase [Spirosoma linguale DSM 74] Length = 280 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 30/268 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL+++ +P+Y +IY+ D+ PYG + + + D+ Sbjct: 8 IGVFDSGYGGLTVLREIVKKLPQYDYIYLGDNARTPYGTRSFDTVYHYTLECVQHLFDR- 66 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSM-----AFLGAV-PAIKQAAAYTQSGLIS 124 L ++ACNTA + + +L + +P + LG + P + Y+++G + Sbjct: 67 GCRLVILACNTASAKALRNIQQLDLPAQYPGLDGPDRRVLGVIRPTTEVIGTYSKTGKVG 126 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+T T+ I + + + + VE + +K+ I+ Sbjct: 127 VLATRGTVTSESYRVEIEKFFPGLGVFQEACPMWVPLVENGEYDSPGADYFVKQHIDRLL 186 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIAR--------RARC 232 + D ++LACTHYPL++ + +P L SDS+A A+C Sbjct: 187 AQS--PDIDTLLLACTHYPLLLEKIKHFAPSGATILSQGGIVSDSLADYLVRHPEIEAQC 244 Query: 233 ----LLPRINTHQTRVFDDHALFLSGKP 256 + T T FD A G+P Sbjct: 245 SKHGQRTFLTTDATEDFDRQATIFYGQP 272 >gi|225552350|ref|ZP_03773290.1| glutamate racemase [Borrelia sp. SV1] gi|225371348|gb|EEH00778.1| glutamate racemase [Borrelia sp. SV1] Length = 261 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 21/198 (10%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I+IFDSGIGGL + ++ + E ++YVAD+ FPYG L + ++FL Sbjct: 2 KNFKEVIIIFDSGIGGLSYFKYIKSRIGECQYVYVADNKNFPYGEKSPEYLLEAVLFLIE 61 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + Y V+ACNT + ++L FP + L V ++ + +++T Sbjct: 62 KLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIATN 117 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184 TL + + Q +IH + +I+ + E EY G K+D ++ +E Sbjct: 118 TTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC-LEALK 165 Query: 185 IEKEGKRTDVIVLACTHY 202 E +++ L CTHY Sbjct: 166 FEVVNTGREIVFLGCTHY 183 >gi|239833140|ref|ZP_04681469.1| Glutamate racemase [Ochrobactrum intermedium LMG 3301] gi|239825407|gb|EEQ96975.1| Glutamate racemase [Ochrobactrum intermedium LMG 3301] Length = 278 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 16/233 (6%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 +K + P + L + + +FD+GIG +++ +R P+ IY AD FPYG Sbjct: 2 LKHETAPAVENLHDPVAVFDAGIGSYALVELIRRSQPQRDIIYFADRASFPYGAKS---- 57 Query: 61 KKRLMFLFSDILDKYQPVLS----VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + +L+ + + +Y L V+A N ++ D L+S F ++ G P ++ A A Sbjct: 58 RDQLLSIMRHTI-RYLTGLGAQTIVLASNAPSVMVLDALKSEF-AVPVYGVAPPVRAAFA 115 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCH-IHLVSSMILASRVEEYACGIKIKEDE 175 ++SG ++++ + + + + + + + L+++ + VE A + E Sbjct: 116 ASRSGKVAVMGVRSMIESEELARFVRAEADRPEDVALINASAMVELVENGAFLRQPGETG 175 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW--LDNSDSI 226 K I R D + L+ TH P + F P DW LD +D + Sbjct: 176 QKVAAFCDEIAASHPRIDTLTLSSTHLPWLRSFFETARP---DWRFLDPADDV 225 >gi|325570406|ref|ZP_08146183.1| glutamate racemase [Enterococcus casseliflavus ATCC 12755] gi|325156616|gb|EGC68793.1| glutamate racemase [Enterococcus casseliflavus ATCC 12755] Length = 277 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 14/249 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I DSG+GGL V+++ +P +Y+ D PYG + + +L+K Sbjct: 13 IGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIAYTWQMTRFLLEKN 72 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 +L VIACNTA + +E++ ++ +G + P + A +++ I ++ T T++ Sbjct: 73 IKML-VIACNTATAVALEEIKEKL-AIPVIGVILPGSRAAVKASKNQRIGVIGTNGTIKS 130 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +H + ++ VE +Y + KK + + KR Sbjct: 131 DSYKRALHGKAPHASVVSLACPKFVPIVESKQYHSSVA------KKIVAETLRPLKNKRL 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDHA 249 D ++L CTHYPL+ + + + +D+ LL + T Q HA Sbjct: 185 DTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPQHA 244 Query: 250 LFLSGKPDI 258 F +G P I Sbjct: 245 FFTTGSPKI 253 >gi|225867935|ref|YP_002743883.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus] gi|225871149|ref|YP_002747096.1| glutamate racemase [Streptococcus equi subsp. equi 4047] gi|254766125|sp|C0M7R0|MURI_STRE4 RecName: Full=Glutamate racemase gi|259509918|sp|C0MGG5|MURI_STRS7 RecName: Full=Glutamate racemase gi|225700553|emb|CAW95041.1| glutamate racemase [Streptococcus equi subsp. equi 4047] gi|225701211|emb|CAW98144.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus] Length = 264 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 33/255 (12%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+ ++ +P IY+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVSELMRQLPHEKIIYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K+ ++ V ACNTA + +E++ + LG + P A T G Sbjct: 53 YTWELVRFLLTKHVKMI-VFACNTATAVAWEEVKEAL-DIPVLGVILPGASAAIKATSGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKE 173 + ++ T T I S + Q I L++ + +V AC +I Sbjct: 111 KVGVIGTSMT---------ISSGIYQEKIQLLAPTV---QVTSLACPRFVPIVESNEISS 158 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 KK + GK D +VL CTHYPL+ + + + V +D+ R L Sbjct: 159 SVAKKIVYETLAPLVGK-IDTLVLGCTHYPLLRTIIQNVLGPQVKLIDSGAECVRDISVL 217 Query: 234 LPRINTHQTRVFDDH 248 L + +R D+H Sbjct: 218 LNYFEINGSR-DDEH 231 >gi|284049086|ref|YP_003399425.1| glutamate racemase [Acidaminococcus fermentans DSM 20731] gi|283953307|gb|ADB48110.1| glutamate racemase [Acidaminococcus fermentans DSM 20731] Length = 279 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 6/195 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + + I + DSG+GGL VL+ ++ +P FI++ D PYGN + R + +D Sbjct: 3 QAKQPIGVIDSGVGGLTVLKWLQAKLPHEDFIFIGDTARTPYGNRSREEI-TRFVAEMTD 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 LDK V+ACNT L D ++ P +G + T++ + +T Sbjct: 62 WLDKRHIKQLVVACNTITVLGLDVIKGNHP-FDVIGMAKGSRMVPGVTKNNRVGFFATDF 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ I + + +E G K E+K I + Sbjct: 121 TVSTGAHKREIQRICPEIQVFGQGCPKFVPLIE----GEKFGSPELKAAIHEYADKLREH 176 Query: 191 RTDVIVLACTHYPLI 205 D ++L+CTHYP + Sbjct: 177 NVDTVLLSCTHYPFV 191 >gi|299822584|ref|ZP_07054470.1| glutamate racemase [Listeria grayi DSM 20601] gi|299816113|gb|EFI83351.1| glutamate racemase [Listeria grayi DSM 20601] Length = 270 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 22/258 (8%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + Sbjct: 1 MKQAIGFIDSGVGGLTVVKEVLKQLPHEQIYYLGDTARCPYGPRKPEEVLKFTREMSHFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ +L VIACNTA ++R+ + +G + P + A +++ I++L T Sbjct: 61 IDRGIKML-VIACNTATAAALVQIRAEL-DIPVIGVIQPGSRAALKESRNNKIAVLGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 T++ + Q + ++ S VE EY I KK + + + Sbjct: 119 TVKSEAYPKALKRLNHQVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D ++L CTHYPL+ + V +++ + A LL D H Sbjct: 173 NTTIDTVILGCTHYPLLKPIIENFLGADVAVINSGEETASEVSALL-----------DYH 221 Query: 249 ALFLSGKPDIAMRRLMQG 266 L SG I R G Sbjct: 222 GLLDSGGDTIKHRFFTTG 239 >gi|304390777|ref|ZP_07372729.1| glutamate racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325660|gb|EFL92906.1| glutamate racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 271 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 19/209 (9%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ++N P I IFDSG+GGL V + + +P Y+ D PYG + Sbjct: 1 MIVNNAP--------IGIFDSGLGGLTVARSIIDQLPGESVTYIGDTANSPYGTKPVERV 52 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAV-PAIKQAAAY 117 K+ + + ++D+ +L VIACNTA RS + + L + PA+ +A + Sbjct: 53 KELSLSVMDKLVDRGVKML-VIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSA 111 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T++G I +++T T+ +H+Y Q + + VE GI + + Sbjct: 112 TRNGHIGVIATHTTIETETYQRALHAY-QQVQVSAKACPAFVDFVER---GITSGPELLA 167 Query: 178 KEIEGCFIEK-EGKRTDVIVLACTHYPLI 205 E ++E D +VL CTHYPL+ Sbjct: 168 VARE--YLEPIRDAGVDTLVLGCTHYPLL 194 >gi|296393941|ref|YP_003658825.1| glutamate racemase [Segniliparus rotundus DSM 44985] gi|296181088|gb|ADG97994.1| glutamate racemase [Segniliparus rotundus DSM 44985] Length = 274 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 17/199 (8%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL V + + L+P YVAD PYG +++ + + ++ Sbjct: 7 EAPIGVFDSGVGGLTVARAVADLLPHEAMRYVADSAHQPYGPQSVAQVRRHALAVLDSLV 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D+ +L VIACN+A + R +P +PA++ A A T+SG I ++ T T+ Sbjct: 67 DEGVKML-VIACNSASVACLADARERYPVPVVEVVLPAVRSALAATRSGRIGVIGTRITI 125 Query: 133 -RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGK 190 R Y + H +VS+ R ++ I++ + E+E +E Sbjct: 126 ASRAYEDSF---AAVAPHTSVVSAPC--PRFVDF-----IEQGVVSGPELEALALEYLAP 175 Query: 191 RT----DVIVLACTHYPLI 205 T DV+VL CTHYPL+ Sbjct: 176 LTAADVDVLVLGCTHYPLL 194 >gi|126652650|ref|ZP_01724811.1| glutamate racemase [Bacillus sp. B14905] gi|126590499|gb|EAZ84617.1| glutamate racemase [Bacillus sp. B14905] Length = 265 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 12/243 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V +++ +P Y+ D PYG + + + + L+K Sbjct: 5 IGVIDSGVGGLTVAKEIMKRLPNETIYYIGDTARCPYGPRSRQEV-RNFTWQMAKALEKM 63 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134 + VIACNTA + + L+ P LG + A +AA T+ + +L+T T++ Sbjct: 64 NVKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEGTIKS 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + S + HI ++ VE EY K + K I + ++ Sbjct: 123 GAYEEALLSLNTSTHIIPLACPTFVPLVESGEY------KGEFATKLIAEGLKPLKNQQF 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251 D ++L CTHYP++ + V+ L +++ A+ + +L T H F Sbjct: 177 DTVILGCTHYPILQKQIEAVVGDEVNVLSSAEETAKDVQEMLAYNGTLANANTVPAHKFF 236 Query: 252 LSG 254 +G Sbjct: 237 ATG 239 >gi|300866341|ref|ZP_07111042.1| Glutamate racemase [Oscillatoria sp. PCC 6506] gi|300335646|emb|CBN56202.1| Glutamate racemase [Oscillatoria sp. PCC 6506] Length = 288 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 29/211 (13%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE----DHALKKRLMFLF 68 Q I IFDSG+GGL VL+++ +P +Y D PYG H +++ + +L Sbjct: 7 QQRIGIFDSGVGGLTVLRELYRQLPGESILYFGDTARLPYGTRSAGEITHFVREIMAWLR 66 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 S + + ++ACNT+ L + +++ F + LG + P + AA Q I +++ Sbjct: 67 SLNVK-----MVIMACNTSSALALETVQAEF-DIPILGVILPGAR--AAVQQGKRIGVIA 118 Query: 128 TPATL-----RRTYTSNLIHSYVSQCHIHLVSSMILASRV-EEYACGIKIKEDEIKKEIE 181 TPAT RR ++S V Q +I +R+ + Y E+ +E Sbjct: 119 TPATAASNAYRRAILEMDVNSQVWQVGCPEFVPLIEQNRIYDPYTL-------EVAREYL 171 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212 I+++ D +V CTHYP + V R L Sbjct: 172 APLIQQQ---IDTLVYGCTHYPHLAPVVRSL 199 >gi|297622727|ref|YP_003704161.1| glutamate racemase [Truepera radiovictrix DSM 17093] gi|297163907|gb|ADI13618.1| glutamate racemase [Truepera radiovictrix DSM 17093] Length = 270 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 10/211 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL +R L+P HF+YV D PYG+ ++ + + +L + Sbjct: 11 VFDSGVGGLTVLAALRALLPAEHFLYVGDTARVPYGSKPLEMVRAFAAEICALLLSRGVK 70 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 + V+ACNTA L + P + P ++ A G I +L T T+R Sbjct: 71 GI-VVACNTASAAALPGLAAELPVPVWGVIAPGVQAALRRAPGGRIGVLGTAGTIRTGAY 129 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + + C + + VEE + + I + + ++ K+ D +L Sbjct: 130 QRPLEA--AGCRVWARPCPLFVPIVEE-----GVSDTVIARLVAEHYL-KDAPALDAAIL 181 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 CTHYP + + ++ P LD+++ AR Sbjct: 182 GCTHYPALKGILSEVLPG-TALLDSAEETAR 211 >gi|20807090|ref|NP_622261.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4] gi|24418565|sp|Q8RC52|MURI2_THETN RecName: Full=Glutamate racemase 2 gi|20515581|gb|AAM23865.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4] Length = 264 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 34/234 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I +FDSG+GGL VL+++ ++PE +IY D PYG+ K+ + I++ Sbjct: 6 IGVFDSGVGGLTVLKRLIQVLPEEDYIYFGDTKRVPYGDRS----KEEIELFAGQIINFM 61 Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPAT 131 K + V + VIACNT I + + + + A ++ Y T++ + +++T T Sbjct: 62 KEKNVKAVVIACNTTCATID---KGKY-DIELFDVLKAGAESGVYCTKNKKVGVIATKRT 117 Query: 132 LR-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + R+Y N+ I Y C + L+ + S + A + Sbjct: 118 VESRSYEINIKSINPQIEVYQKACPEFVPLIEKGLYNSHLAYKAA-------------KD 164 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 C E +GK D ++L CTHYPL+ + + + V +D + ++ + L R Sbjct: 165 CLEEFKGKEIDTLILGCTHYPLMEPIIKAIMGDGVKVVDPAVRLSHEVKEYLER 218 >gi|332686497|ref|YP_004456271.1| glutamate racemase [Melissococcus plutonius ATCC 35311] gi|332370506|dbj|BAK21462.1| glutamate racemase [Melissococcus plutonius ATCC 35311] Length = 273 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 14/248 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I + DSG+GGL V++++ +P +FIY+ D PYG+ + + + ++ L Sbjct: 4 QYAIGLIDSGVGGLTVVKELCRQLPNENFIYLGDTAHCPYGSKPTEQV-IQYTWQMTNFL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + L VIACNTA + +E+++T + +G + P + A A T+S I ++ T T Sbjct: 63 LRKKIKLLVIACNTATAAVLEEIKNTL-DIPVIGVIAPGARAAIAATKSQRIGVIGTEGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI--KIKEDEIKKEIEGCFIEKEG 189 ++ I V + VS + S V G IK EI + + Sbjct: 122 IKSQAYEKNIKLLVEK---SFVSCLACPSFVPLVEMGNYHTIKAKEI---VTKTLAPLKL 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFD 246 K+ D +VL CTHYPL+ + V +D S + + LL ++ ++QT Sbjct: 176 KQLDTLVLGCTHYPLLRSFIQTAIGSQVTLIDPSIETVKEIQDLLAHSNKLTSNQTNNNP 235 Query: 247 DHALFLSG 254 + +G Sbjct: 236 SRKFYTTG 243 >gi|194099309|ref|YP_002002407.1| glutamate racemase [Neisseria gonorrhoeae NCCP11945] gi|193934599|gb|ACF30423.1| glutamate racemase [Neisseria gonorrhoeae NCCP11945] Length = 326 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 121 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 122 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 182 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 237 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 238 IDTLVLGCTHFPLL 251 >gi|296875970|ref|ZP_06900029.1| glutamate racemase [Streptococcus parasanguinis ATCC 15912] gi|296433045|gb|EFH18833.1| glutamate racemase [Streptococcus parasanguinis ATCC 15912] Length = 264 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 16/242 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K ++ V+ACNTA ++ +E++ + LG + P A T Sbjct: 53 YTWQMVNFLLTKNVKMI-VLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I S + ++ VE + + + + ++ Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMKVTSLACPKFVPLVESNELASSVTKKVVYETLK 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225 Query: 242 TR 243 +R Sbjct: 226 SR 227 >gi|195978747|ref|YP_002123991.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975452|gb|ACG62978.1| glutamate racemase MurI [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 292 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 33/255 (12%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+ ++ +P IY+ D PYG +++ Sbjct: 29 MDNRP--------IGFLDSGVGGLTVVSELMRQLPHEKIIYIGDSARAPYGPRPAEQIRE 80 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K+ ++ V ACNTA + +E++ + LG + P A T G Sbjct: 81 YTWELVRFLLTKHVKMI-VFACNTATAVAWEEVKEAL-DIPVLGVILPGASAAIKATSGG 138 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKE 173 + ++ T T I S + Q I L++ + +V AC +I Sbjct: 139 KVGVIGTSMT---------ISSGIYQEKIQLLAPTV---QVTSLACPRFVPIVESNEISS 186 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 KK + GK D +VL CTHYPL+ + + + V +D+ R L Sbjct: 187 SVAKKIVYETLAPLVGK-IDTLVLGCTHYPLLRTIIQNVLGPQVKLIDSGAECVRDISVL 245 Query: 234 LPRINTHQTRVFDDH 248 L + +R D+H Sbjct: 246 LNYFEINGSR-DDEH 259 >gi|293398523|ref|ZP_06642701.1| glutamate racemase [Neisseria gonorrhoeae F62] gi|291610994|gb|EFF40091.1| glutamate racemase [Neisseria gonorrhoeae F62] Length = 326 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 121 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 122 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 182 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 237 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 238 IDTLVLGCTHFPLL 251 >gi|290967732|ref|ZP_06559287.1| glutamate racemase [Megasphaera genomosp. type_1 str. 28L] gi|290782248|gb|EFD94821.1| glutamate racemase [Megasphaera genomosp. type_1 str. 28L] Length = 267 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 14/216 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL V+ K+R L+P + IYV D PYG+ ++ DIL Sbjct: 8 IGIFDSGVGGLTVVNKLRMLLPHENIIYVGDTKRNPYGSRT----AAEILSYTRDILRFM 63 Query: 74 KYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Q V L I CNT + +L P +G IK A + G I++ +T T+ Sbjct: 64 SAQSVKLVAIGCNTVTATVYPQLMQEVP-YPLIGMSKGIKTAQKISAGGTIAVFATELTI 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I LA +E Y G KI ++K + + Sbjct: 123 ANHSHKKAAAAWDPGLKIIEQPCPELAGLIERGYLQGTKIMA-PLQKYLAPVL----QTQ 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D + CTH+P I +F LS + ++D + +A Sbjct: 178 ADTAIFGCTHFPFIQPLFEMLSQDRLAFVDPAHEMA 213 >gi|145222944|ref|YP_001133622.1| glutamate racemase [Mycobacterium gilvum PYR-GCK] gi|145215430|gb|ABP44834.1| glutamate racemase [Mycobacterium gilvum PYR-GCK] Length = 278 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 7/191 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P IYV D PYG ++ + + D+ + Sbjct: 9 IGIFDSGVGGLTVARAVIDQLPHEDIIYVGDTGNGPYGPLTIPQIRAHALAIGDDLAGRG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L VIACN+A + + R + + + + PA+++A A T++G I ++ T AT+ Sbjct: 69 IKAL-VIACNSASSACLRDARERYAPIPVVEVILPAVRRAVAATRNGRIGVIGTAATI-- 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + S+ + I + + R ++ ++ E + + D Sbjct: 126 -ASGAYQDSFAAARDIEVFG--VACPRFVDFVERGVTSGRQVLGLAEAYLEPLQRAQVDT 182 Query: 195 IVLACTHYPLI 205 +VL CTHYP++ Sbjct: 183 LVLGCTHYPML 193 >gi|224476259|ref|YP_002633865.1| glutamate racemase [Staphylococcus carnosus subsp. carnosus TM300] gi|254766124|sp|B9DPT7|MURI_STACT RecName: Full=Glutamate racemase gi|222420866|emb|CAL27680.1| putative glutamate racemase [Staphylococcus carnosus subsp. carnosus TM300] Length = 266 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 7/245 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG E ++K + L + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDSARCPYGPREGDEVRKFTVQLAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + D L+ P + +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALDTLKELLP-IPVIGVIEPGSRTAIMTTKNNNVMVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I + + V+ VE+ + + + I Sbjct: 119 TIKSEAYTKHIKAINPHVDVTGVACPDFVPLVEQMRYHDPVPTNIV---IHQTLKNYRTN 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 + D ++L CTHYPL+ + + AR LL N H + H Sbjct: 176 KADTVILGCTHYPLLFEPLHDYFGGSKTVISSGLETAREVSALLTFSNEHAPYTPNTKHR 235 Query: 250 LFLSG 254 F +G Sbjct: 236 FFATG 240 >gi|227544196|ref|ZP_03974245.1| glutamate racemase [Lactobacillus reuteri CF48-3A] gi|300908191|ref|ZP_07125657.1| glutamate racemase [Lactobacillus reuteri SD2112] gi|227185832|gb|EEI65903.1| glutamate racemase [Lactobacillus reuteri CF48-3A] gi|300894618|gb|EFK87974.1| glutamate racemase [Lactobacillus reuteri SD2112] Length = 267 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 6/239 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V++ +R +P+ I+V D FPYG +++ + + +L++ Sbjct: 6 IGVMDSGLGGLSVIRVLREQLPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLLEQD 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ +IACNTA L++ P + +G + AA I ++ T +T++ Sbjct: 66 VKMM-IIACNTATAAALRLLQNELP-IPVIGVIEPGAMAATQHHYKKIGVIGTESTIKNG 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + + + L S VE G + + E+E F + + + + Sbjct: 124 AYAKTLAKLNPDLSVISSPAQPLVSIVEHGQTGTSEAQKAVDTELE-VF---DNQSIEAL 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +L CTH+P + V +D + R+A+ LL N + L+ +G Sbjct: 180 ILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTGKNQLSDNLASSINLYSTG 238 >gi|257866171|ref|ZP_05645824.1| glutamate racemase [Enterococcus casseliflavus EC30] gi|257872501|ref|ZP_05652154.1| glutamate racemase [Enterococcus casseliflavus EC10] gi|257800105|gb|EEV29157.1| glutamate racemase [Enterococcus casseliflavus EC30] gi|257806665|gb|EEV35487.1| glutamate racemase [Enterococcus casseliflavus EC10] Length = 274 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 16/250 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I DSG+GGL V+++ +P +Y+ D PYG + + + +L+K Sbjct: 10 IGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIEYTWQMTRFLLEKN 69 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +L VIACNTA + +E++ T P + + +P + A +++ I ++ T T++ Sbjct: 70 IKML-VIACNTATAVALEEIKEQLTIPVIGVI--LPGSRAAVKASKNQRIGVIGTNGTIK 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +H + ++ VE +Y + KK + + KR Sbjct: 127 SDSYKRALHGKAPHASVVSLACPKFVPIVESKQYHSSVA------KKIVAETLRPLKNKR 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDH 248 D ++L CTHYPL+ + + + +D+ LL + T Q H Sbjct: 181 LDTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPKH 240 Query: 249 ALFLSGKPDI 258 A F +G P + Sbjct: 241 AFFTTGSPKM 250 >gi|254385389|ref|ZP_05000717.1| glutamate racemase [Streptomyces sp. Mg1] gi|194344262|gb|EDX25228.1| glutamate racemase [Streptomyces sp. Mg1] Length = 263 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L MR L P+ + +D G P+G L +R + + + Sbjct: 3 IALMDSGIGLLAAAAAMRRLRPDADLVISSDPDGMPWGPRTPADLTERAVAVAR-AAAAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIVACNTASVHSLPNLRAELEPAIPVIGTVPAIKPAAA--AGGRVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + + V LA VE ++ + + TDV Sbjct: 120 PYQRGLIRDFAAGVRVTEVPCPGLADAVEHGNEEEVVRAVAAAAALTPPDV------TDV 173 Query: 195 IVLACTHYPLIVHVFR 210 VL CTHY L+ V R Sbjct: 174 -VLGCTHYELVDEVIR 188 >gi|257875806|ref|ZP_05655459.1| glutamate racemase [Enterococcus casseliflavus EC20] gi|257809972|gb|EEV38792.1| glutamate racemase [Enterococcus casseliflavus EC20] Length = 274 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 14/249 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I DSG+GGL V+++ +P +Y+ D PYG + + + +L+K Sbjct: 10 IGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIEYTWQMTRFLLEKN 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 +L VIACNTA + +E++ ++ +G + P + A +++ I ++ T T++ Sbjct: 70 IKML-VIACNTATAVALEEIKEQL-AIPVIGVILPGSRAAVKASKNQRIGVIGTNGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +H + ++ VE +Y + KK + + KR Sbjct: 128 DSYKRALHGKAPHASVVSLACPKFVPIVESKQYHSSVA------KKIVAETLRPLKNKRL 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDHA 249 D ++L CTHYPL+ + + + +D+ LL + T Q HA Sbjct: 182 DTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPQHA 241 Query: 250 LFLSGKPDI 258 F +G P + Sbjct: 242 FFTTGSPKM 250 >gi|148543776|ref|YP_001271146.1| glutamate racemase [Lactobacillus reuteri DSM 20016] gi|184153182|ref|YP_001841523.1| glutamate racemase [Lactobacillus reuteri JCM 1112] gi|227363244|ref|ZP_03847376.1| glutamate racemase [Lactobacillus reuteri MM2-3] gi|325682148|ref|ZP_08161666.1| glutamate racemase [Lactobacillus reuteri MM4-1A] gi|167017317|sp|A5VIY5|MURI_LACRD RecName: Full=Glutamate racemase gi|229486242|sp|B2G6G1|MURI_LACRJ RecName: Full=Glutamate racemase gi|148530810|gb|ABQ82809.1| glutamate racemase [Lactobacillus reuteri DSM 20016] gi|183224526|dbj|BAG25043.1| glutamate racemase [Lactobacillus reuteri JCM 1112] gi|227071700|gb|EEI09991.1| glutamate racemase [Lactobacillus reuteri MM2-3] gi|324978792|gb|EGC15741.1| glutamate racemase [Lactobacillus reuteri MM4-1A] Length = 267 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 6/239 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V++ +R +P+ I+V D FPYG +++ + + +L++ Sbjct: 6 IGVMDSGLGGLSVIRVLREQLPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLLEQD 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ +IACNTA L++ P + +G + AA I ++ T +T++ Sbjct: 66 VKMM-IIACNTATAAALRLLQNELP-IPVIGVIKPGAMAATQHHYKKIGVIGTESTIKNG 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + + + L S VE G + + E+E F + + + + Sbjct: 124 AYAKTLAKLNPDLSVISSPAQPLVSIVEHGQTGTSEAQKAVDTELE-VF---DNQSIEAL 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +L CTH+P + V +D + R+A+ LL N + L+ +G Sbjct: 180 ILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTGKNQLSDNLASSINLYSTG 238 >gi|329947436|ref|ZP_08294640.1| glutamate racemase [Actinomyces sp. oral taxon 170 str. F0386] gi|328525186|gb|EGF52237.1| glutamate racemase [Actinomyces sp. oral taxon 170 str. F0386] Length = 280 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 12/226 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++D+ Sbjct: 1 MFDSGVGGLTVARSVLDQLPHERVLYIGDTANGPYGPRDIAEVRSLALSIMDELVDRGVK 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPATL- 132 +L VIACNTA + + R + + + PA + AA T++G + +++T T+ Sbjct: 61 LL-VIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGRVGLIATRGTVD 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R Y L + + L S R E A E+ E + Sbjct: 120 SRAYDDAL----QAVPGVELFSQAC--PRFVELAERGVTTGPEVLDVAEEYLAPIKAAGV 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D ++L CTHYPL+V + V + +SD A+ L R N Sbjct: 174 DTLILGCTHYPLLVGPISYVMGEEVALVTSSDETAKDVYRALARRN 219 >gi|229490649|ref|ZP_04384487.1| glutamate racemase [Rhodococcus erythropolis SK121] gi|229322469|gb|EEN88252.1| glutamate racemase [Rhodococcus erythropolis SK121] Length = 254 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 19/219 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L P+ + D G P+G + + R++ LD+ Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLVLSLDPDGAPWGPKPEPWVVDRVLGAVRRSLDRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ V+ CNTA +R P + +G VPAIK AAA S ++I +T AT Sbjct: 63 AQVI-VLPCNTASVTALPHVRELVGPGVPVIGTVPAIKPAAAACDS--VAIWATAATTAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-- 192 Y ++LI + + + V LA + D + IE RT Sbjct: 120 RYQADLIEQFGNGAKVVGVPCHGLADSI-----------DLGDRAAALAAIESAVARTPD 168 Query: 193 DV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 DV +VL CTHYPL+ P V D+++++AR+ Sbjct: 169 DVNGVVLGCTHYPLLADEIAARLPAGVTLFDSAEAVARQ 207 >gi|317164818|gb|ADV08359.1| glutamate racemase [Neisseria gonorrhoeae TCDC-NG08107] Length = 349 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 86 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 144 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 145 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 204 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 205 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 260 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 261 IDTLVLGCTHFPLL 274 >gi|225571415|ref|ZP_03780411.1| hypothetical protein CLOHYLEM_07513 [Clostridium hylemonae DSM 15053] gi|225159891|gb|EEG72510.1| hypothetical protein CLOHYLEM_07513 [Clostridium hylemonae DSM 15053] Length = 273 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 13/194 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILD 73 I +FDSG+GGL V +++ +P+ + +Y D PYG+ + + + R + F L+ Sbjct: 11 IGVFDSGVGGLTVAREIMRQLPDENIVYFGDTARVPYGSKSRNNIIRFSRQIIRF---LE 67 Query: 74 KYQPVLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 VIACNTA L D ++ S P + + VP + A T+S I ++ T AT Sbjct: 68 TKGVKAIVIACNTASALALDVVKEESGIPIIGVI--VPGARAAVKETKSKKIGVVGTEAT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ S +I + + + VEE + DEI IE E + Sbjct: 126 IQSHTYSKVITDMEPEASVIGKPCPLFVPLVEEGFAKHHVT-DEI---IEYYLDEMKHSD 181 Query: 192 TDVIVLACTHYPLI 205 D ++L CTHYPL+ Sbjct: 182 IDTMILGCTHYPLL 195 >gi|229553813|ref|ZP_04442538.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family protein [Lactobacillus rhamnosus LMS2-1] gi|229312836|gb|EEN78809.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family protein [Lactobacillus rhamnosus LMS2-1] Length = 485 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 16/252 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L Sbjct: 4 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 63 Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 K+ +L VIACNT A LIK L+ + +G + P + A TQ+G I I++ Sbjct: 64 TKHIKML-VIACNTATAAALPLIKARLK-----IPVIGVIKPGSRAALKATQTGHIGIIA 117 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + + + +++ S VE I + + ++ + Sbjct: 118 TEGTVKSGAYPKALRAKAPNIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHQD 177 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246 D +VL CTHYP++ + + + V +D+ LL + + Sbjct: 178 ----IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVP 233 Query: 247 DHALFLSGKPDI 258 H + +G P + Sbjct: 234 THTYYTTGAPSM 245 >gi|332673655|gb|AEE70472.1| glutamate racemase [Helicobacter pylori 83] Length = 255 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 34/249 (13%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKYSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT++ N + +HL +S+ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVLHLATSLFV-PLIEE-----NILESELLETCMRYYFTPLK 171 Query: 190 KRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCL 233 +V++L CTH+PLI H + LS P V++L ++ + A C Sbjct: 172 ILPEVVILGCTHFPLIAHQIKGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA-CA 230 Query: 234 LPRINTHQT 242 P++ H + Sbjct: 231 FPKVEFHAS 239 >gi|297379750|gb|ADI34637.1| glutamate racemase [Helicobacter pylori v225d] Length = 255 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQ-------LSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAHPIESYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|312143228|ref|YP_003994674.1| glutamate racemase [Halanaerobium sp. 'sapolanicus'] gi|311903879|gb|ADQ14320.1| glutamate racemase [Halanaerobium sp. 'sapolanicus'] Length = 291 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 29/270 (10%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I + DSG+GGL V +++ L+P IY D + PYG + +++ + + + + Sbjct: 5 KRAIGLLDSGVGGLTVAREIFKLLPGEDIIYYGDTLHLPYGPKKLSEVREYVENIIAYLK 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + VIACNT + D ++ F F A K+A +Q+ I+++ T T+ Sbjct: 65 QEKNVKAVVIACNTGSSAALDYVKQKFEIPIFGMIDSAAKKAVKVSQNNKIAVIGTEGTI 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR- 191 SQ + + S + AC +K E K G +EK R Sbjct: 125 N------------SQAYQKAIKYESAESEIFAKACPGFVKLVEAGK-FSGPEVEKTAYRY 171 Query: 192 --------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 DV++L CTH+P ++ V ++ V ++ + A + R L + N Sbjct: 172 LESIIKAKVDVLILGCTHFPYLMPVLAKVMGKDVMLVNPAQETALKFRKELNKANLLNKD 231 Query: 244 VF-------DDHALFLSGKPDIAMRRLMQG 266 +F +H +S + I+ L G Sbjct: 232 IFLNKDIVEGEHKFIVSDESRISKSFLEHG 261 >gi|306480261|emb|CBV36488.1| glutamate racemase [Helicobacter pylori] Length = 255 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 32/248 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA +L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASSLALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 R N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 RSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234 +V++L CTH+PLI H LS P V++L ++ + A C Sbjct: 173 LPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLHQKYALKKNA-CAF 231 Query: 235 PRINTHQT 242 P++ H + Sbjct: 232 PKVEFHAS 239 >gi|258538968|ref|YP_003173467.1| glutamate racemase [Lactobacillus rhamnosus Lc 705] gi|257150644|emb|CAR89616.1| Glutamate racemase [Lactobacillus rhamnosus Lc 705] Length = 484 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 16/252 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 K+ +L VIACNT A LIK L+ + +G + P + A TQ+G I I++ Sbjct: 63 TKHIKML-VIACNTATAAALPLIKARLK-----IPVIGVIKPGSRAALKATQTGHIGIIA 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + + + +++ S VE I + + ++ + Sbjct: 117 TEGTVKSGAYPKALRAKAPNIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHQD 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246 D +VL CTHYP++ + + + V +D+ LL + + Sbjct: 177 ----IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVP 232 Query: 247 DHALFLSGKPDI 258 H + +G P + Sbjct: 233 THTYYTTGAPSM 244 >gi|188527606|ref|YP_001910293.1| glutamate racemase [Helicobacter pylori Shi470] gi|229486238|sp|B2UTT1|MURI_HELPS RecName: Full=Glutamate racemase gi|188143846|gb|ACD48263.1| glutamate racemase [Helicobacter pylori Shi470] Length = 255 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|323706012|ref|ZP_08117582.1| glutamate racemase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534626|gb|EGB24407.1| glutamate racemase [Thermoanaerobacterium xylanolyticum LX-11] Length = 263 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 26/215 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+K++ L+P +IY D PYG+ ++ + + + +K Sbjct: 6 IGVFDSGVGGLTVLKKLKELLPNEDYIYFGDTKRVPYGDKSKGEIEMYARQIINFMNEKN 65 Query: 76 QPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++ VIACNT I KDE + S+ GA + AA T++ + +++T T Sbjct: 66 TKII-VIACNTTCASIDKDEYKEILFSVLEAGA----ESAADITKNNKVGVIATTRT--- 117 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEKE---- 188 + S + I L + + V + AC + + E + + E + KE Sbjct: 118 ------VESGSYEKSIRLKNGDV---DVFQKACPGFVPLVEKGLSESDESFKLAKEYLKA 168 Query: 189 --GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 + D +VL CTHYP++++ + + V +D Sbjct: 169 LNDEGIDTLVLGCTHYPILLNAIKNAAREDVLIVD 203 >gi|323489950|ref|ZP_08095171.1| glutamate racemase [Planococcus donghaensis MPA1U2] gi|323396246|gb|EGA89071.1| glutamate racemase [Planococcus donghaensis MPA1U2] Length = 267 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 103/258 (39%), Gaps = 26/258 (10%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ L+P Y+ D+ PYG A + + ++ Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIMKLLPNEQICYIGDNARCPYGP-RPLAEVRTYTWQMANA 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L K + VIACNTA L+ P + +G + P + A + + I++L T Sbjct: 60 LMKKNIKMLVIACNTATAAALYSLQKNLP-IPVIGVIFPGARAAVKSSTTNKIAVLGTSG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S VS H+ ++ VE E EG F + + Sbjct: 119 TVKSGAYEKAVLSLVSSAHVIQLACPRFVPLVE-------------SDEYEGEFAHRIVQ 165 Query: 191 RT---------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 T D +L CTHYPL+ ++ V L +++ A+ L N Sbjct: 166 ETLATIAYEEFDTAILGCTHYPLLQGFIEEVLGDTVHVLSSAEETAKDVERYLHYKNQFA 225 Query: 242 TRVFDD-HALFLSGKPDI 258 R H + SG I Sbjct: 226 NREKPPVHRFYTSGSTQI 243 >gi|258645749|ref|ZP_05733218.1| glutamate racemase [Dialister invisus DSM 15470] gi|260403118|gb|EEW96665.1| glutamate racemase [Dialister invisus DSM 15470] Length = 258 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 32/244 (13%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL V ++ P FI++ D PYGN + Sbjct: 1 MDNRP--------IGIMDSGVGGLTVACVLKEKYPNEKFIFIGDTARNPYGNKS----PE 48 Query: 63 RLMFLFSDI---LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 + F ++ L Q + + ACNT + + P F G +P I + + + Sbjct: 49 EVTFFAEEMKAFLAGKQVKMIIAACNT--------ITFSVPPSFFEGKIPVIGMSLDFPE 100 Query: 120 ---SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 ++++ TP T+R + ++ + LA YA + +E I Sbjct: 101 LESVNHLAVIGTPMTIRSHRHRERLKKDFPLMNVTEIPIDGLA-----YAIEMGKEESFI 155 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + I + + D VLACTHYPL+ VFR + P + +D ++ ++A +L Sbjct: 156 YRMINKAVQKAGAESVDAAVLACTHYPLVAGVFRDILPNTL-LIDPAERTVKKAMSILAD 214 Query: 237 INTH 240 N Sbjct: 215 QNGQ 218 >gi|85860927|ref|YP_463129.1| glutamate racemase [Syntrophus aciditrophicus SB] gi|123517831|sp|Q2LXZ9|MURI_SYNAS RecName: Full=Glutamate racemase gi|85724018|gb|ABC78961.1| glutamate racemase [Syntrophus aciditrophicus SB] Length = 270 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 5/214 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I +FDSG+GGL V++ + +P + +Y D PYG + + ++ L Sbjct: 9 HPIGVFDSGVGGLTVVRALMERLPFENILYFGDTARVPYGVKSVETINAYARQI-TEFLL 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + L +IACNT + + + S P ++A A T++ + ++ TP T+ Sbjct: 68 RQEVKLLIIACNTMAAVARQSVESLSPVPVLDVIDAGARRAVAETRTHSVGVIGTPTTIN 127 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + I + I + +L VEE + ++ + E D Sbjct: 128 SNAYARAICRLAPETRIFSQACALLVPLVEEGWLDHPVTRLTAQEYLRPVLAEH----ID 183 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 +VL CTHYPL+ + + ++ + +D+++++A Sbjct: 184 TLVLGCTHYPLLKALLQDVAGPDIHLVDSAEAMA 217 >gi|313624059|gb|EFR94143.1| glutamate racemase [Listeria innocua FSL J1-023] Length = 266 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 112/273 (41%), Gaps = 26/273 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAQFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ +L VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + ++ S VE EY I KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238 + D ++L CTHYPL+ + V +++ + A LL N Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIE 232 Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266 T T++F D A PD+ + + G Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLG 265 >gi|16800269|ref|NP_470537.1| glutamate racemase [Listeria innocua Clip11262] gi|20177980|sp|Q92CH2|MURI_LISIN RecName: Full=Glutamate racemase gi|16413659|emb|CAC96431.1| racE [Listeria innocua Clip11262] gi|313619282|gb|EFR91023.1| glutamate racemase [Listeria innocua FSL S4-378] Length = 266 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 112/273 (41%), Gaps = 26/273 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAQFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ +L VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + ++ S VE EY I KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238 + D ++L CTHYPL+ + V +++ + A LL N Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDDEIE 232 Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266 T T++F D A PD+ + + G Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLG 265 >gi|325955658|ref|YP_004239318.1| glutamate racemase [Weeksella virosa DSM 16922] gi|323438276|gb|ADX68740.1| Glutamate racemase [Weeksella virosa DSM 16922] Length = 269 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 15/241 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL ++++ L+P+ +Y D PYG A+KK + ++ + Sbjct: 8 IGVFDSGVGGLNFAKEIKRLLPKESIVYFGDTKHLPYGEKSAEAIKKYSKEITQFLISQN 67 Query: 76 QPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + ++ACNT A +IK+ + + + + + AY I +++T AT Sbjct: 68 CKAI-LVACNTATANAIEIIKE---VAGEEILVVDVINPVAEKVAYELRTKIGVIATKAT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I + + V++ +L +EE + + +E K+ + Sbjct: 124 VNSCAYKKTIRKFNKHIKVVEVATPLLVPIIEEGLYNTNVS----RAVLEVYLSNKKLEG 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D I+L CTHYPLI Q+ V + NS I CL+ +++ Q +++ + Sbjct: 180 IDSIILGCTHYPLIQKEIEQIFEGKVQVI-NSPLIV--VNCLIYQLHQRQQLANNNNPYY 236 Query: 252 L 252 L Sbjct: 237 L 237 >gi|308063661|gb|ADO05548.1| glutamate racemase [Helicobacter pylori Sat464] Length = 255 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L E++ S P + +G ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALKEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|199598101|ref|ZP_03211524.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family protein [Lactobacillus rhamnosus HN001] gi|258507777|ref|YP_003170528.1| glutamate racemase [Lactobacillus rhamnosus GG] gi|199591027|gb|EDY99110.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family protein [Lactobacillus rhamnosus HN001] gi|257147704|emb|CAR86677.1| Glutamate racemase [Lactobacillus rhamnosus GG] gi|259649124|dbj|BAI41286.1| glutamate racemase [Lactobacillus rhamnosus GG] Length = 484 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 16/252 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 K+ +L VIACNT A LIK L+ + +G + P + A TQ+G I I++ Sbjct: 63 TKHIKML-VIACNTATAAALPLIKARLK-----IPVIGVIKPGSRAALKATQTGHIGIIA 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + + + +++ S VE I + + ++ + Sbjct: 117 TEGTVKSGAYPKALRAKAPDIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHQD 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246 D +VL CTHYP++ + + + V +D+ LL + + Sbjct: 177 ----IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVP 232 Query: 247 DHALFLSGKPDI 258 H + +G P + Sbjct: 233 THTYYTTGAPSM 244 >gi|59801838|ref|YP_208550.1| glutamate racemase [Neisseria gonorrhoeae FA 1090] gi|239999567|ref|ZP_04719491.1| glutamate racemase [Neisseria gonorrhoeae 35/02] gi|240014744|ref|ZP_04721657.1| glutamate racemase [Neisseria gonorrhoeae DGI18] gi|240017192|ref|ZP_04723732.1| glutamate racemase [Neisseria gonorrhoeae FA6140] gi|240081170|ref|ZP_04725713.1| glutamate racemase [Neisseria gonorrhoeae FA19] gi|240113384|ref|ZP_04727874.1| glutamate racemase [Neisseria gonorrhoeae MS11] gi|240116270|ref|ZP_04730332.1| glutamate racemase [Neisseria gonorrhoeae PID18] gi|240118556|ref|ZP_04732618.1| glutamate racemase [Neisseria gonorrhoeae PID1] gi|240121267|ref|ZP_04734229.1| glutamate racemase [Neisseria gonorrhoeae PID24-1] gi|240124100|ref|ZP_04737056.1| glutamate racemase [Neisseria gonorrhoeae PID332] gi|240126283|ref|ZP_04739169.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679] gi|254494283|ref|ZP_05107454.1| glutamate racemase [Neisseria gonorrhoeae 1291] gi|260439916|ref|ZP_05793732.1| glutamate racemase [Neisseria gonorrhoeae DGI2] gi|268595380|ref|ZP_06129547.1| glutamate racemase [Neisseria gonorrhoeae 35/02] gi|268597280|ref|ZP_06131447.1| glutamate racemase [Neisseria gonorrhoeae FA19] gi|268599457|ref|ZP_06133624.1| glutamate racemase [Neisseria gonorrhoeae MS11] gi|268601935|ref|ZP_06136102.1| glutamate racemase [Neisseria gonorrhoeae PID18] gi|268604265|ref|ZP_06138432.1| glutamate racemase [Neisseria gonorrhoeae PID1] gi|268682724|ref|ZP_06149586.1| glutamate racemase [Neisseria gonorrhoeae PID332] gi|268684866|ref|ZP_06151728.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679] gi|75432415|sp|Q5F6P9|MURI_NEIG1 RecName: Full=Glutamate racemase gi|59718733|gb|AAW90138.1| putative glutamate racemase [Neisseria gonorrhoeae FA 1090] gi|226513323|gb|EEH62668.1| glutamate racemase [Neisseria gonorrhoeae 1291] gi|268548769|gb|EEZ44187.1| glutamate racemase [Neisseria gonorrhoeae 35/02] gi|268551068|gb|EEZ46087.1| glutamate racemase [Neisseria gonorrhoeae FA19] gi|268583588|gb|EEZ48264.1| glutamate racemase [Neisseria gonorrhoeae MS11] gi|268586066|gb|EEZ50742.1| glutamate racemase [Neisseria gonorrhoeae PID18] gi|268588396|gb|EEZ53072.1| glutamate racemase [Neisseria gonorrhoeae PID1] gi|268623008|gb|EEZ55408.1| glutamate racemase [Neisseria gonorrhoeae PID332] gi|268625150|gb|EEZ57550.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679] Length = 270 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|282895562|ref|ZP_06303696.1| Glutamate racemase [Raphidiopsis brookii D9] gi|281199402|gb|EFA74266.1| Glutamate racemase [Raphidiopsis brookii D9] Length = 292 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 19/255 (7%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E+ ++ I +FDSG+GGL VL+++ +P IY D PYG +K ++ Sbjct: 21 EEIPKSPIGVFDSGVGGLTVLRQVYQQLPNESVIYFGDTAHLPYGIRS----QKEILGYV 76 Query: 69 SDILD--KYQPV-LSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 +IL+ + Q V + ++ACNT A TL L FP + + PA K A + I Sbjct: 77 REILNWMEQQGVKMVIMACNTSSALTLETVRLEYKFPILGMIS--PATKFAVNVGKR--I 132 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++TPAT + I + VS +E+ D + Sbjct: 133 GVIATPATAKSNAYRQAIMELKPNVQVWQVSCPEFVPLIEQNRL-----HDPYTLAVAKS 187 Query: 184 FIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 ++E + D ++ CTHYPL+ + + L P + +D + + R + L +N Sbjct: 188 YLEPLLAQEIDTLIYGCTHYPLLEPIIKTLIPNHIHLVDPAVHVVRVCQRELEILNIKNH 247 Query: 243 RVFDDHALFLSGKPD 257 + +SG P Sbjct: 248 LLPMPTRFVVSGSPQ 262 >gi|299142407|ref|ZP_07035539.1| glutamate racemase [Prevotella oris C735] gi|298576129|gb|EFI48003.1| glutamate racemase [Prevotella oris C735] Length = 278 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 17/203 (8%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFS 69 I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + ++ +M LF Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQAVMKLF- 67 Query: 70 DILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123 + L ++ CNTA ++ +++L + PS LG + P + T++ + Sbjct: 68 ----ELGCHLVILGCNTASAKALRSIQRNDLPNLDPSRRVLGVIRPTAEIIGTLTKNNHV 123 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T++ I + + V+ VE + +KK I+ Sbjct: 124 GLLATEGTVKSHSYDLEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRIDEL 183 Query: 184 FIEKEGKRTDVIVLACTHYPLIV 206 + D I+L CTHYP+++ Sbjct: 184 MLHD--PDIDTIILGCTHYPILM 204 >gi|291043190|ref|ZP_06568913.1| glutamate racemase [Neisseria gonorrhoeae DGI2] gi|291012796|gb|EFE04779.1| glutamate racemase [Neisseria gonorrhoeae DGI2] Length = 285 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 22 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 80 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 81 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 140 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 141 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 196 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 197 IDTLVLGCTHFPLL 210 >gi|229042717|ref|ZP_04190457.1| Glutamate racemase [Bacillus cereus AH676] gi|228726657|gb|EEL77874.1| Glutamate racemase [Bacillus cereus AH676] Length = 265 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 7/238 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA EL+ S+ +G + P + A T+ I ++ T T++ Sbjct: 60 KALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 +H + +H + LA+ VE I ++K+ + + D ++ Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENRLEDIAYVTQQVKQ----ALLPLTKEDIDTLI 174 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 232 >gi|325203563|gb|ADY99016.1| glutamate racemase [Neisseria meningitidis M01-240355] Length = 270 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL + + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVCALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 ++ VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|240128767|ref|ZP_04741428.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035] gi|268687151|ref|ZP_06154013.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035] gi|268627435|gb|EEZ59835.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035] Length = 270 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A +AA A T++ I I++T T Sbjct: 66 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181 Query: 192 TDVIVLACTHYPLI 205 D +VL CTH+PL+ Sbjct: 182 IDTLVLGCTHFPLL 195 >gi|257069150|ref|YP_003155405.1| glutamate racemase [Brachybacterium faecium DSM 4810] gi|256559968|gb|ACU85815.1| glutamate racemase [Brachybacterium faecium DSM 4810] Length = 270 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 32/203 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ +Y+ D PYG ++ + + +++ Sbjct: 6 IGIFDSGVGGLTVARAVLDQLPQEELVYIGDTAHGPYGPRPIAEVRSLALEIMDELVGHG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR- 134 +L VIACNTA + + R + PA+++A A T++ + +++T T+ Sbjct: 66 VKML-VIACNTASAAVLRDARERYDVPVIEVIQPAVRRAVAATRNRRVGVIATEGTVTSR 124 Query: 135 ------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 T T+ +V +VS + EEY ++E E+ Sbjct: 125 AYEDAFAAAPDLTLTAQACPRFVEFVENGVVSGREVVEMAEEYLA--PVREAEV------ 176 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 D +VL CTHYP++ Sbjct: 177 ----------DTLVLGCTHYPML 189 >gi|258651923|ref|YP_003201079.1| glutamate racemase [Nakamurella multipartita DSM 44233] gi|258555148|gb|ACV78090.1| glutamate racemase [Nakamurella multipartita DSM 44233] Length = 301 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 24/251 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P YV D PYG +++ + + ++D Sbjct: 40 IGIFDSGVGGLTVARAIIDQLPGERVRYVGDTANGPYGPLPIAEVRRHALAVGDRLVDSG 99 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +L VIACNTA + R + PA+++A A T++G + ++ T AT+ Sbjct: 100 VKIL-VIACNTASAACLADARERYDVPVVEVIRPAVRRAIAATRTGEVGVIGTSATIASG 158 Query: 136 YTSNL--------IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 + +H+ + V I + R ++ + Sbjct: 159 AYQDAFDVNPGVRVHAVACPSFVDFVERGITSGR-------------QVIGLAQAYLGPL 205 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVF 245 + D +VL CTHYPL+ + V + ++D A+ L ++ TR Sbjct: 206 QRTNLDTLVLGCTHYPLLTGALSLVMGDQVTLVSSADETAKDVYRKLTELDLLAPGTRPS 265 Query: 246 DDHALFLSGKP 256 H +G P Sbjct: 266 APHEFLATGDP 276 >gi|317474408|ref|ZP_07933682.1| Asp/Glu/Hydantoin racemase [Bacteroides eggerthii 1_2_48FAA] gi|316909089|gb|EFV30769.1| Asp/Glu/Hydantoin racemase [Bacteroides eggerthii 1_2_48FAA] Length = 279 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 39/259 (15%) Query: 9 EKKLQNS---ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 ++KL +S I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + Sbjct: 2 KQKLPSSPGPIGVFDSGYGGLTILSKIREILPEYDYIYLGDNARAPYGT---RSFEVVYA 58 Query: 66 FLFSDILDKYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117 F + ++ L ++ACNTA ++ ++L + LG + P ++ Sbjct: 59 FTLQAVTRLFEMGCHLVILACNTASAKALRSIQINDLPHLDSARRVLGVIRPTVECIGNI 118 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKED 174 T+S + +L+T T++ S+ + + + +V AC + ++ + Sbjct: 119 TRSRHVGVLATSGTIK------------SESYPLEIRKLFPDIKVSGEACPLWVSLVENN 166 Query: 175 EIKKEIEGCFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 E + + FI K + + D +L CTHYP+++ +Q P + + +A Sbjct: 167 EAQGDGTDYFIRKYINELLAKDREIDTAILGCTHYPILLPKIQQYMPAGITIVSQGQLVA 226 Query: 228 RRARCLL---PRINTHQTR 243 + L P I+ TR Sbjct: 227 DSLKDYLHRHPEIDIKCTR 245 >gi|323359605|ref|YP_004226001.1| glutamate racemase [Microbacterium testaceum StLB037] gi|323275976|dbj|BAJ76121.1| glutamate racemase [Microbacterium testaceum StLB037] Length = 272 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 12/193 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+ D PYG +++ + + ++++ Sbjct: 6 IGIFDSGVGGLTVARAVSQQLPRESILYIGDTARSPYGPKPIADVRRYALEVLDTLVEQG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL- 132 +L VIACNTA + + R + P + +G PA++ A + T++G I ++ T T+ Sbjct: 66 VKML-VIACNTASAAMLRDARERYDVPVVEVIG--PAVRTAMSTTRNGRIGVIGTVGTIG 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R Y L + + +L R E+ E+ E Sbjct: 123 SRAYQDML------EVNENLTVFAEACPRFVEFVEAGVTDSPEVLATAEQYLAPLRHAGV 176 Query: 193 DVIVLACTHYPLI 205 D +VL CTHYP + Sbjct: 177 DTLVLGCTHYPFL 189 >gi|261879009|ref|ZP_06005436.1| glutamate racemase [Prevotella bergensis DSM 17361] gi|270334393|gb|EFA45179.1| glutamate racemase [Prevotella bergensis DSM 17361] Length = 281 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 17/242 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 Q +I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + ++ + LF Sbjct: 10 QGAIGVFDSGYGGLTILHGIRRLLPQYDYIYLGDNARAPYGPRSFDVVYEFTRQSVAKLF 69 Query: 69 SDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122 + L +I CNTA ++ +++L P LG + P + T++ Sbjct: 70 AMGCQ-----LVIIGCNTASAKALRSIQQNDLPQWDPDRRVLGIIRPTAEVIGQLTRNNH 124 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L+T T++ + I Q + + VE + +KK I+ Sbjct: 125 VGLLATEGTVKSQSYNMEIAKLWPQIQVTGQACPFWVLLVEYNEADSPGADYFVKKRIDQ 184 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D I+L CTH+PL++ ++ V + D +A+ + L R + Sbjct: 185 LM--QLDPDIDTIILGCTHFPLLMPKIQKYVKPNVRIVPQGDYVAKSLKAYLERHQDMEA 242 Query: 243 RV 244 R+ Sbjct: 243 RL 244 >gi|197693690|gb|ACH71514.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPVVGVIGPSILAIKQQVK-NKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LEILPEVVILGCTHFPLIAH 189 >gi|289434486|ref|YP_003464358.1| hypothetical protein lse_1119 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170730|emb|CBH27270.1| murI [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313633648|gb|EFS00406.1| glutamate racemase [Listeria seeligeri FSL N1-067] gi|313638209|gb|EFS03457.1| glutamate racemase [Listeria seeligeri FSL S4-171] Length = 266 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 11/226 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + +++ + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVRQFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ +L VIACNTA ++R+ + +G + P + A T++ I +L T Sbjct: 61 VDRGIKML-VIACNTATAAALYDIRAKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + ++ S VE EY I KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + D ++L CTHYPL+ + V +++ + A LL Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDDVAVINSGEETASEVSALL 218 >gi|322434927|ref|YP_004217139.1| glutamate racemase [Acidobacterium sp. MP5ACTX9] gi|321162654|gb|ADW68359.1| glutamate racemase [Acidobacterium sp. MP5ACTX9] Length = 271 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 17/197 (8%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG GGL VL+ + L+P ++Y+ D PYG + + + + +L++ Sbjct: 10 TIGVFDSGFGGLTVLRALLPLIPGARYLYLGDTARLPYGAKSQQTIARYALSSAAFLLEQ 69 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 +L V+ACNTA L D+L+ P + +G + P AA+ + +L+T AT++ Sbjct: 70 GIEML-VVACNTATALALDDLKQALP-IPVVGVIAPGTAAAASANADTNVLVLATTATVQ 127 Query: 134 -----RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 R T+ + +Y C +L VEE + + ++ + +E Sbjct: 128 SGAYTRACTALGLTAYEKACP-------LLVPLVEEGWIDHPVTAEVLRIYLTEAL--EE 178 Query: 189 GKRTDVIVLACTHYPLI 205 ++L CTHYPL+ Sbjct: 179 APNATTLLLGCTHYPLL 195 >gi|300172982|ref|YP_003772148.1| glutamate racemase/Nucleoside-triphosphatase [Leuconostoc gasicomitatum LMG 18811] gi|299887361|emb|CBL91329.1| Glutamate racemase/Nucleoside-triphosphatase [Leuconostoc gasicomitatum LMG 18811] Length = 486 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 25/232 (10%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GGL V+++ + +P FI++ D PYG + + + ++ Sbjct: 4 NNPIGMIDSGVGGLTVIKEAQKQLPNEQFIFIGDTARMPYGPRTTDEVIAYTFQMANYLI 63 Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Q + VIACNT A T+++ +L T P + + P + A T++ I I++T Sbjct: 64 TEKQIKMLVIACNTATACALTVLQKKL--TIPVIGVI--QPGAQAAQLATKNKTIGIIAT 119 Query: 129 PATLRRTYTSNLIHSY------VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 T+ IH Y +SQ V ++ A++ +++A + + Sbjct: 120 DGTVNSKAYELQIHQYGADTKVLSQGEPDFV-QLVEANKYQDHAT---------RDIVMN 169 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS-DSIARRARCL 233 + D ++L CTH+PL+ R+ + +D+ ++I +CL Sbjct: 170 HLAPFKAAGIDTLILGCTHFPLLEPFIREAVGKQITLIDSGRETIYAIKQCL 221 >gi|289422435|ref|ZP_06424278.1| glutamate racemase [Peptostreptococcus anaerobius 653-L] gi|289157007|gb|EFD05629.1| glutamate racemase [Peptostreptococcus anaerobius 653-L] Length = 268 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 31/245 (12%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSG+GGL VL+++ + +Y D PYG + K Sbjct: 1 MDNRP--------IGVFDSGLGGLTVLREIHKRLANEDTVYFGDTARVPYGPRSKETIIK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSG 121 F + L + VIACNTA +E ++ + ++ +G + A + A YT + Sbjct: 53 -YTFQAINFLIQQDVKAIVIACNTATARALEEAKAEY-NVPIIGVIEAGARSAVEYTNNK 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKK 178 ++ ++ T T+ S+ +++ + SM + RV + AC + ++E + Sbjct: 111 VVGVIGTLGTIN------------SKAYVNTIRSMDESIRVIDKACPLFVPLVEEGWANE 158 Query: 179 EIEGC-----FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 EI E K D IVL CTHYP++ + ++ + A + + Sbjct: 159 EISSTAAHMYLDELVEKGVDSIVLGCTHYPILKRTIGMAVGQEIKLINPAKETALELKEI 218 Query: 234 LPRIN 238 L + N Sbjct: 219 LNQAN 223 >gi|89067791|ref|ZP_01155245.1| Glutamate racemase [Oceanicola granulosus HTCC2516] gi|89046761|gb|EAR52816.1| Glutamate racemase [Oceanicola granulosus HTCC2516] Length = 270 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 48/224 (21%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70 ++ IFDSG+GGL VL+ ++ +PE F+Y+AD PYG + + + LF Sbjct: 2 AVGIFDSGLGGLTVLEAVQKRLPEVPFVYMADSAHAPYGVRDADDIYDLTTASVARLFEA 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121 D L+++ACNTA ++ ++ P+ LG + +A Q G Sbjct: 62 GCD-----LAILACNTASAAALRRMQESWVPPNKRVLGVFVPLIEALTERQWGDNSPPRE 116 Query: 122 ----LISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-------- 168 +++ +TPAT+R R + L + VE ACG Sbjct: 117 VAVKHVALFATPATVRARAFQRELAFRAIG-------------VDVEAQACGGVVDAIEE 163 Query: 169 --IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + + E ++ ++ ++ D VL CTHYPL+ VF+ Sbjct: 164 GDMILAEALVRSHVDALL--RKMPEPDAAVLGCTHYPLMAEVFQ 205 >gi|220903374|ref|YP_002478686.1| glutamate racemase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867673|gb|ACL48008.1| glutamate racemase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 311 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 27/248 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL VL+ + +P +Y+ D PYG + + + ++D Sbjct: 9 VGLFDSGMGGLTVLKALNHRLPGEDLLYLGDTARLPYGTKGPDTIVRYTLKAAQKLVDMG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 +L V+ACNTA LR F + LG V P + AA +++G I +L T AT+ Sbjct: 69 VKML-VVACNTATAAALPALRQHFAPLPVLGVVEPGAQAAAQASRNGHIVVLGTEATING 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG--CFIEKEGK-- 190 I + + + + EE + E ++ +EG C + G Sbjct: 128 GAYQQAIARIRPEAVVLGRACNLFVPLAEEGWMDGPLVEGVARRYLEGFFCAPDTNGANG 187 Query: 191 ---------------------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + D ++L CTHYPL+ R + V +D++ A+ Sbjct: 188 SNDAASTAQPRAAAGAANAPVQPDTLLLGCTHYPLLQGALRHVVGPDVRIVDSAAITAQV 247 Query: 230 ARCLLPRI 237 L R+ Sbjct: 248 VAGELARL 255 >gi|57866660|ref|YP_188316.1| glutamate racemase [Staphylococcus epidermidis RP62A] gi|242242450|ref|ZP_04796895.1| glutamate racemase [Staphylococcus epidermidis W23144] gi|71151977|sp|Q5HQ24|MURI_STAEQ RecName: Full=Glutamate racemase gi|57637318|gb|AAW54106.1| glutamate racemase [Staphylococcus epidermidis RP62A] gi|242234100|gb|EES36412.1| glutamate racemase [Staphylococcus epidermidis W23144] gi|319401537|gb|EFV89747.1| glutamate racemase [Staphylococcus epidermidis FRI909] Length = 267 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 9/246 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +KK L + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKKFTTELAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + D L++ P + +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALDYLQNILP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189 T++ I +++ V+ VE+ ++ K+ I I + Sbjct: 119 TIKSEAYRTHIKKINPNVNVYSVACPGFVPLVEQ----MRYKDPTITNIVIHQTLKQWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248 D ++L CTHYPL+ + + + AR LL N H + H Sbjct: 175 SDADTVILGCTHYPLLYQPIYEYFSGTKTVISSGLETAREVSALLTFSNEHASYTEHPQH 234 Query: 249 ALFLSG 254 F +G Sbjct: 235 RFFATG 240 >gi|333022620|ref|ZP_08450684.1| putative glutamate racemase [Streptomyces sp. Tu6071] gi|332742472|gb|EGJ72913.1| putative glutamate racemase [Streptomyces sp. Tu6071] Length = 260 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 82/194 (42%), Gaps = 17/194 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + RL ++ Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDI-TRLALGAAEAAAAL 61 Query: 76 QPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +P VIACNTA T LR+ TFP +G VPAIK AAA+ ++I +TPAT Sbjct: 62 EPDALVIACNTASTHALPALRARFEDTFP---VIGTVPAIKPAAAFGAP--VAIWATPAT 116 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 Y LI + ++ V+ LA V+ + Sbjct: 117 TGSEYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADAAARTPAGVR----- 171 Query: 192 TDVIVLACTHYPLI 205 V+VL CTHY L+ Sbjct: 172 --VVVLGCTHYELV 183 >gi|282877118|ref|ZP_06285960.1| glutamate racemase [Prevotella buccalis ATCC 35310] gi|281300800|gb|EFA93127.1| glutamate racemase [Prevotella buccalis ATCC 35310] Length = 279 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG + ++ ++ LF Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGTRSFDVVYEFTRQAVVKLFEMG 70 Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 L ++ CNTA T+ + +L S + LG + P + + T+S + + Sbjct: 71 CH-----LVILGCNTASAKALRTIQQHDLPSLDSNRRVLGVIRPTAEVIGSLTKSRHVGL 125 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T T++ I + + ++ VE + +KK ++ + Sbjct: 126 LATEGTVKSESYQLEIQKFFPDIQVSGIACPFWVPLVEYNEADSPGADYFVKKRLDA--L 183 Query: 186 EKEGKRTDVIVLACTHYPLIV 206 ++ D I+L CTHYPL++ Sbjct: 184 AQKDPLIDTIILGCTHYPLLM 204 >gi|216263947|ref|ZP_03435941.1| glutamate racemase [Borrelia afzelii ACA-1] gi|215979991|gb|EEC20813.1| glutamate racemase [Borrelia afzelii ACA-1] Length = 261 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 22/199 (11%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPE-YHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++FL Sbjct: 2 KNFKEVIIVFDSGIGGLSYFKYIKSKVEGGYQYVYVADNKNFPYGEKSSEYLLEAVLFLI 61 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y ++ACNT + ++L FP + L V +I A + +++T Sbjct: 62 EKLKKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSSISDLAL----KRVLLIAT 117 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGC 183 TL + + Q ++H +I+ + E EY G K K+D ++ +E Sbjct: 118 NTTLESKFVKD-------QVNMH--EDLIVKAAGELVNFVEY--GKKYKKDALRC-LEAL 165 Query: 184 FIEKEGKRTDVIVLACTHY 202 E +++ L CTHY Sbjct: 166 KSEVVNTGREIVFLGCTHY 184 >gi|217033496|ref|ZP_03438925.1| hypothetical protein HP9810_905g15 [Helicobacter pylori 98-10] gi|216944021|gb|EEC23452.1| hypothetical protein HP9810_905g15 [Helicobacter pylori 98-10] Length = 255 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT+R N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQ-------LSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAHQIESYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CTFPKVEFHAS 239 >gi|300725872|ref|ZP_07059336.1| glutamate racemase [Prevotella bryantii B14] gi|299776860|gb|EFI73406.1| glutamate racemase [Prevotella bryantii B14] Length = 280 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 14/208 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + F +L + Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYGI---RSFDVVYQFTRQAVLKMF 67 Query: 76 QP--VLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 Q L ++ CNTA ++ + +L PS LG + P + T S + +L+ Sbjct: 68 QMGCQLVILGCNTASAKALRSIQQRDLPELDPSRRVLGVIRPTAEIIGNLTSSRHVGLLA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ I + V+ VE + +KK ++ ++ Sbjct: 128 TEGTIKSQSYDIEIKKLFPDIQVSGVACPFWVPLVEYNEMDSPGADYFVKKRVDELMLKD 187 Query: 188 EGKRTDVIVLACTHYPLIV-HVFRQLSP 214 K D I+L CTH+PL++ + + +SP Sbjct: 188 --KDIDAIILGCTHFPLLMPKIIKYVSP 213 >gi|296268925|ref|YP_003651557.1| glutamate racemase [Thermobispora bispora DSM 43833] gi|296091712|gb|ADG87664.1| glutamate racemase [Thermobispora bispora DSM 43833] Length = 277 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 14/247 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +I IFDSG+GGL V + + +P YVAD PYG +++ + + D L Sbjct: 3 SGAIGIFDSGVGGLTVARAIIDQLPNESIFYVADTARQPYGPKPIAKVREYALEVM-DHL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++ + VIACN+A + + R + PA+++A T++ + ++ T AT+ Sbjct: 62 VEHEVKMLVIACNSASAAVLRDARERYSVPVVEVIQPAVRRAVRVTKNRKVGVIGTRATI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + ++ + I LV+ + A + E+ + E+ + I G Sbjct: 122 ESMAYHD---AFAAAPDIELVA--VAAPLLVEFVERGETMSKELIEVIRGYLKPILDAGC 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR--INT-----HQTRV 244 D ++L CTHYPL+ ++ V + +++ A+ R L R N H+ R Sbjct: 177 DTLILGCTHYPLLTGAISYVAGDGVTLVSSAEETAKDVYRILHDRGMFNAEAEPFHRFRA 236 Query: 245 FDDHALF 251 D ALF Sbjct: 237 TGDTALF 243 >gi|171911183|ref|ZP_02926653.1| glutamate racemase [Verrucomicrobium spinosum DSM 4136] Length = 271 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 25/235 (10%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK----RLMFLFSDILD 73 +FDSG+GGL V++ + L+P IY+ D PYG+ ++K FL S + Sbjct: 12 VFDSGVGGLTVVRALLDLLPNESIIYLGDTARVPYGSKSPDTIRKFSVEDTQFLLSKGVK 71 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 V+ACNTA +LR F P + L P ++ A + I+ T T Sbjct: 72 AV-----VVACNTATAHALPQLRQMFRVPVVGVLE--PGVEATLADPACQRVGIIGTAGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE----YACGIKIKEDEIKKEIEGCFIEK 187 ++ + + I+ ++ +L VEE + + + +K ++ Sbjct: 125 IKSHAYQHELAMRRPDLQIYAEATPLLVPLVEEDWIDHPATKMVLREYLKPMLD------ 178 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 K D +VL CTHYPL+ + +++ V +D++ + A + +L +T Sbjct: 179 --KGMDTLVLGCTHYPLLKPLLKRILNNKVRMVDSALTCAEHVKRMLAEQGLERT 231 >gi|153811627|ref|ZP_01964295.1| hypothetical protein RUMOBE_02019 [Ruminococcus obeum ATCC 29174] gi|149832368|gb|EDM87453.1| hypothetical protein RUMOBE_02019 [Ruminococcus obeum ATCC 29174] Length = 273 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 23/236 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILD 73 I +FDSG+GGL V +++ +P +Y D PYG+ + + R + F L Sbjct: 9 IGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSRDTVIRYSRQIIHF---LK 65 Query: 74 KYQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Q VIACNT AF L + P + +GA K AA T + + ++ T T Sbjct: 66 EQQAKAIVIACNTASAFALDAVQHEQDIPVLGVIGA--GAKVAAEETVNKRVGVIGTVGT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLV----SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 + S + +Y+ + + + + VEE D + E+ ++++ Sbjct: 124 V----GSGIHEAYLKKLDPEITVIGKACPLFVPLVEEGWL-----HDPVTVEVANRYLQE 174 Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + K D ++L CTHYPLI R++ V ++ + A + LL + N T Sbjct: 175 LKDKDVDTLILGCTHYPLIRSTIREVMGEKVRLVNPAYETALELKNLLQKTNMLST 230 >gi|226320707|ref|ZP_03796265.1| glutamate racemase [Borrelia burgdorferi 29805] gi|226233923|gb|EEH32646.1| glutamate racemase [Borrelia burgdorferi 29805] Length = 305 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKK 178 +++T TL + + Q +IH + +I+ + E EY G K+D ++ Sbjct: 156 LLIATNTTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC 204 Query: 179 EIEGCFIEKEGKRTDVIVLACTHY 202 +E E +++ L CTHY Sbjct: 205 -LEALKFEVVNTGREIVFLGCTHY 227 >gi|221217513|ref|ZP_03588984.1| glutamate racemase [Borrelia burgdorferi 72a] gi|221192791|gb|EEE19007.1| glutamate racemase [Borrelia burgdorferi 72a] Length = 305 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKK 178 +++T TL + + Q +IH + +I+ + E EY G K+D ++ Sbjct: 156 LLIATNTTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC 204 Query: 179 EIEGCFIEKEGKRTDVIVLACTHY 202 +E E +++ L CTHY Sbjct: 205 -LEALKFEVVNTGREIVFLGCTHY 227 >gi|229143571|ref|ZP_04271996.1| Glutamate racemase [Bacillus cereus BDRD-ST24] gi|296501581|ref|YP_003663281.1| glutamate racemase [Bacillus thuringiensis BMB171] gi|228639927|gb|EEK96332.1| Glutamate racemase [Bacillus cereus BDRD-ST24] gi|296322633|gb|ADH05561.1| glutamate racemase [Bacillus thuringiensis BMB171] Length = 276 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 7/240 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA EL+ S+ +G + P + A T+ I ++ T T++ Sbjct: 69 PLKALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +H + +H + LA+ VE I ++K+ + + D Sbjct: 128 NMYEKALHELDTYLEVHSHACPNLATVVENRLEDIAYVTQQVKQ----ALLPLTKEDIDT 183 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 184 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 243 >gi|209966583|ref|YP_002299498.1| glutamate racemase [Rhodospirillum centenum SW] gi|209960049|gb|ACJ00686.1| glutamate racemase [Rhodospirillum centenum SW] Length = 280 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 20/231 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL+ + +P F+Y+ D PYGN + L + L Sbjct: 2 IGVFDSGHGGLTVLRALVDALPGRSFVYLGDHAHAPYGNRTPEEIYG-LTVAAVERLFAQ 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTF---------------PSMAFLGAVPAIKQAAAYTQS 120 L V+ACNTA L L+ T+ P + + VP + A + Sbjct: 61 GCRLVVLACNTASALALRRLQQTWLPCHHPDRRVLGVLVPMVEAITGVPWMADIPAGRHA 120 Query: 121 G---LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 G ++I +T T++ I + + + LA +EE A +I+ ++ Sbjct: 121 GEPRSVAIFATRRTVQSQAYPREIGKRAPEVEVVQQACPDLARLIEEDAPEAEIRR-AVR 179 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + + E ++L CTHYPL+ F P VD LD AR Sbjct: 180 RYTASLMDKLEHGTPSAVMLGCTHYPLVAGEFAAALPAGVDVLDQPALCAR 230 >gi|239782122|pdb|3HFR|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes gi|239782123|pdb|3HFR|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes gi|259090342|pdb|3IST|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes In Complex With Succinic Acid gi|259090343|pdb|3IST|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes In Complex With Succinic Acid gi|259090345|pdb|3ISV|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes In Complex With Acetate Ion gi|259090346|pdb|3ISV|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes In Complex With Acetate Ion Length = 269 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/272 (22%), Positives = 108/272 (39%), Gaps = 26/272 (9%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I DSG+GGL V++++ +P Y+ D PYG + + K + ++ Sbjct: 5 KQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEXTNFLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 D+ L VIACNTA ++R + +G + P + A T++ I +L T T Sbjct: 65 DRGIKXL-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLGT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + ++ S VE EY I KK + + + Sbjct: 123 VESXAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLKS 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN----------- 238 + D ++L CTHYPL+ + V +++ + A LL N Sbjct: 177 TKIDTVILGCTHYPLLKPIIENFXGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEH 236 Query: 239 ----THQTRVFDDHALFLSGKPDIAMRRLMQG 266 T T++F D A PD + + G Sbjct: 237 RFFTTGSTQIFKDIAKDWLNXPDXTVEHIKLG 268 >gi|310778213|ref|YP_003966546.1| glutamate racemase [Ilyobacter polytropus DSM 2926] gi|309747536|gb|ADO82198.1| glutamate racemase [Ilyobacter polytropus DSM 2926] Length = 270 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 10/195 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG GGL V+++++ ++P Y D PYG+ + + + ++ L Sbjct: 3 NRGIGVFDSGFGGLTVVKEIKKVLPGEKIYYFGDTARLPYGSKSKENIIHYSLEI-AEFL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 V+ACNTA DEL+ +FP + + A ++A T++G + I+ T Sbjct: 62 KTKDIKALVVACNTASAFALDELKKHCSFPVIGVIEA--GSRRALGITKNGKVGIIGTKG 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + ++ + VEE + +DE+ + + ++ + Sbjct: 120 TVSSGVYDRSLSKGRKGIEVYSKPCPLFVPLVEE-----GMVQDEVTEIMIDRYLREFKN 174 Query: 191 RTDVIVLACTHYPLI 205 + D +++ CTHYPL+ Sbjct: 175 KVDSLIMGCTHYPLL 189 >gi|315282014|ref|ZP_07870520.1| glutamate racemase [Listeria marthii FSL S4-120] gi|313614341|gb|EFR87979.1| glutamate racemase [Listeria marthii FSL S4-120] Length = 266 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 111/273 (40%), Gaps = 26/273 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVARFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ +L VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + ++ S VE EY I KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238 D ++L CTHYPL+ + V +++ + A LL N Sbjct: 173 STNIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIE 232 Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266 T T++F D A PD+ + + G Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLG 265 >gi|217967731|ref|YP_002353237.1| glutamate racemase [Dictyoglomus turgidum DSM 6724] gi|217336830|gb|ACK42623.1| glutamate racemase [Dictyoglomus turgidum DSM 6724] Length = 265 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 6/203 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRF--LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I I DSG+GGL VL+++ L E +F+ D FPYG +++R+ + S Sbjct: 2 SKIGILDSGVGGLSVLKEVYLNNLADEVYFL--GDTKYFPYGIKPVEFIQERVFEIVS-F 58 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +IACNTA ++ D L+ F + V + A ++ I +L+T T Sbjct: 59 FKSLGVEEVIIACNTASSVAYDFLKDRFRDLKIHSIVLGAIEGAKNYKAKKIGVLATRRT 118 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + LIH +S V S +E GI ++ + I+KEI C K Sbjct: 119 MESNIYPRLIHEKISDKIEVYVQSCSEGPLLETIEKGI-VEGELIEKEIMRCIDPLVEKN 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 + ++L CTH P + V + L P Sbjct: 178 IEGLILGCTHLPFVKKVIKDLYP 200 >gi|282863002|ref|ZP_06272062.1| Glutamate racemase [Streptomyces sp. ACTE] gi|282561984|gb|EFB67526.1| Glutamate racemase [Streptomyces sp. ACTE] Length = 256 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 82/196 (41%), Gaps = 17/196 (8%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSGIG L +R L P+ + +D P+G + +R + + V Sbjct: 1 MDSGIGLLAAAAAVRRLRPDADLVLSSDPASMPWGPLTPEGVTERALAVARAAAAHRPDV 60 Query: 79 LSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L ++ACNT A ++DEL P++ +G VPAIK AAA G ++I +TPAT Sbjct: 61 L-IVACNTASVHALPTLRDELE---PALPVVGTVPAIKPAAA--GGGPVAIWATPATTGS 114 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + S + V LA VE ++ T Sbjct: 115 PYQRGLIEDFASHVDVTEVPCPGLADAVEH-------ADEAAIDRAVAAAAALTPPGTAG 167 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 168 VVLGCTHYELVAERIR 183 >gi|282901288|ref|ZP_06309214.1| Glutamate racemase [Cylindrospermopsis raciborskii CS-505] gi|281193783|gb|EFA68754.1| Glutamate racemase [Cylindrospermopsis raciborskii CS-505] Length = 285 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 19/250 (7%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I +FDSG+GGL VL+++ +P IY D PYG +K ++ +IL+ Sbjct: 23 SPIGVFDSGVGGLTVLRQVYQQLPNESVIYFGDTAHLPYGIRS----QKEILGYVREILN 78 Query: 74 --KYQPV-LSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Q V + ++ACNT A TL L FP + + PA K A + I +++T Sbjct: 79 WMEQQGVKMVIMACNTSSALTLETVRLEYKFPILGMIS--PATKFAVNVGKR--IGVIAT 134 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK- 187 PAT + I + VS +E+ D + ++E Sbjct: 135 PATAKSNAYRQAIMELKVNVQVWQVSCPEFVPLIEQNRL-----HDPYTLAVAKSYLEPL 189 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + D ++ CTHYPL+ + + L P + +D + + R + L +N + Sbjct: 190 LAQEIDTLIYGCTHYPLLEPIIKTLIPNHIHLVDPAVHVVRVCQRELEILNIKNRLLPMP 249 Query: 248 HALFLSGKPD 257 +SG P Sbjct: 250 TRFVVSGSPQ 259 >gi|238853843|ref|ZP_04644208.1| glutamate racemase [Lactobacillus gasseri 202-4] gi|311111115|ref|ZP_07712512.1| glutamate racemase [Lactobacillus gasseri MV-22] gi|238833538|gb|EEQ25810.1| glutamate racemase [Lactobacillus gasseri 202-4] gi|311066269|gb|EFQ46609.1| glutamate racemase [Lactobacillus gasseri MV-22] Length = 266 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 43/264 (16%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ K+ Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRS----KE 48 Query: 63 RLMFLFSD----ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117 ++ L D +L K ++ + CNTA + ++ P + +G V + AAA Sbjct: 49 EIISLTRDSVNFLLSKDVKII-IFGCNTATAVAMSTIKKEIP-LQIIGVVQSGALAAART 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--- 174 T++ ++++ T AT+ HSY+ + I I S + +ED Sbjct: 107 TETKNVAVIGTKATVNS-------HSYLKE--IQYRDPKIQVSEFAQPKLAPLAEEDPAE 157 Query: 175 EIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 EIK+ + + K D +VL CTHYPL+ + +D +D +A+ + Sbjct: 158 EIKQAVVSESLAPLKKADYDTLVLGCTHYPLLRKEIVAVVGQDRKIVDPADQVAQYTYNV 217 Query: 234 LPRINTHQTRVFDDHALFLSGKPD 257 L R LF +G D Sbjct: 218 LRR-----------DGLFAAGNSD 230 >gi|224534028|ref|ZP_03674612.1| glutamate racemase [Borrelia burgdorferi CA-11.2a] gi|224512864|gb|EEF83231.1| glutamate racemase [Borrelia burgdorferi CA-11.2a] Length = 305 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPKYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKK 178 +++T TL + + Q +IH + +I+ + E EY G K+D ++ Sbjct: 156 LLIATNTTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC 204 Query: 179 EIEGCFIEKEGKRTDVIVLACTHY 202 +E E +++ L CTHY Sbjct: 205 -LEALKFEVVNTGREIVFLGCTHY 227 >gi|302523482|ref|ZP_07275824.1| glutamate racemase [Streptomyces sp. SPB78] gi|302432377|gb|EFL04193.1| glutamate racemase [Streptomyces sp. SPB78] Length = 260 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 82/194 (42%), Gaps = 17/194 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + RL ++ Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDI-TRLALGAAEAAAAL 61 Query: 76 QPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +P V+ACNTA T LR+ TFP +G VPAIK AAA+ ++I +TPAT Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFP---VIGTVPAIKPAAAFGAP--VAIWATPAT 116 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 Y LI + ++ V+ LA V+ + Sbjct: 117 TGSEYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADAAARTPAGVR----- 171 Query: 192 TDVIVLACTHYPLI 205 V+VL CTHY L+ Sbjct: 172 --VVVLGCTHYELV 183 >gi|148242257|ref|YP_001227414.1| glutamate racemase [Synechococcus sp. RCC307] gi|147850567|emb|CAK28061.1| Glutamate racemase [Synechococcus sp. RCC307] Length = 292 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 9/214 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q + +FDSG+GGL VL+++ P +YV D PYG+ D A + + L Sbjct: 28 QALLGLFDSGLGGLTVLRRLLSQRPGQRCVYVGDTARVPYGS-RDRAEIRCIAAEVVGWL 86 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNT L D +S + LG + A+ A Q I +L+T AT Sbjct: 87 REQGAEAVVMACNTTNALALDVAQSEA-GVPVLGLIDAV---ARQVQQQRIGVLATEATA 142 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + I + VE + ++ +E R Sbjct: 143 SSGAYGRALQAQRQGLTIVEMGCPAFVPAVEAHQLDTPALRRAAQRYLEPLL----DARV 198 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 + IVL C+HYPL+ + R L P V+ +D + ++ Sbjct: 199 EAIVLGCSHYPLLEPMLRDLLPAGVELIDPAHAL 232 >gi|318059525|ref|ZP_07978248.1| glutamate racemase [Streptomyces sp. SA3_actG] Length = 260 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 82/194 (42%), Gaps = 17/194 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + RL ++ Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDI-TRLALGAAEAAAAL 61 Query: 76 QPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +P V+ACNTA T LR+ TFP +G VPAIK AAA+ ++I +TPAT Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFP---VIGTVPAIKPAAAFGAP--VAIWATPAT 116 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 Y LI + ++ V+ LA V+ + Sbjct: 117 TGSEYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADAAARTPAGVR----- 171 Query: 192 TDVIVLACTHYPLI 205 V+VL CTHY L+ Sbjct: 172 --VVVLGCTHYELV 183 >gi|224534952|ref|ZP_03675521.1| glutamate racemase [Borrelia spielmanii A14S] gi|224513892|gb|EEF84217.1| glutamate racemase [Borrelia spielmanii A14S] Length = 260 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 21/198 (10%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL Sbjct: 2 KNFKEVIIIFDSGIGGLSYFEYIKSKLGGCQYVYVADNKNFPYGKKSPEYLLEAVLFLIE 61 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + Y ++ACNT + ++L FP + L V + A + +++T Sbjct: 62 RLKKIYNVSALILACNTISVSVYNKLNFVFPVVYTLPEVSLVSDLAL----KRVLLIATN 117 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184 TL + + Q ++H + +I+ + E EY G K K+D ++ +E Sbjct: 118 TTLESKFVKD-------QVNMH--NDLIVKAAGELVNFVEY--GKKYKKDALRC-LEALK 165 Query: 185 IEKEGKRTDVIVLACTHY 202 E +++ L CTHY Sbjct: 166 SEVVNTGREIVFLGCTHY 183 >gi|257066004|ref|YP_003152260.1| glutamate racemase [Anaerococcus prevotii DSM 20548] gi|256797884|gb|ACV28539.1| glutamate racemase [Anaerococcus prevotii DSM 20548] Length = 250 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 9/206 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++ +F Y D + PYG + L+ R D L+K+ Sbjct: 4 IGVFDSGLGGLTVLRELAKTNKSQYF-YFGDSLRVPYGGRSEEELR-RFSADIVDFLEKF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNT + D LR + A+K + Y G +L T T+ Sbjct: 62 DIDYYVIACNTLSVTVTDFLREKYDKKFIPITELALKASEKY--QGKFLVLGTKTTINSH 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + N + + ++ V++ L +E K + ++ + I+ K+ + I Sbjct: 120 FYKNNLEKN-PRNTVYEVAASKLVDLIE----ADKKDDKKLNEYIDSYIKIANDKKIENI 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLD 221 +LACTHYP+I + + + +D Sbjct: 175 LLACTHYPIIRENIERRLDYKANIID 200 >gi|119899045|ref|YP_934258.1| glutamate racemase [Azoarcus sp. BH72] gi|119671458|emb|CAL95371.1| glutamate racemase [Azoarcus sp. BH72] Length = 271 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 6/224 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + SI +FDSGIGGL V++ + +P + IY D PYG + A ++ Sbjct: 3 ADARASRSIGVFDSGIGGLTVVRALMERLPFENIIYFGDTARVPYG-VKSVATIEQFTAQ 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126 +D L + + ++ACNT + + + + L + + A A + G I ++ Sbjct: 62 ITDFLLQQDVKMLIVACNTMAAVAAHIVAARAGGIPVLDVIEAGARAAVAASPGGRIGVI 121 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 TP T+ + IH + ++ + + VEE + ++ + E Sbjct: 122 GTPTTVNSNAYARRIHELDAGARVYSQACPLFVPLVEEGWLDHPVTRMTAQEYLRPVLAE 181 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + D +VL CTHYPL+ + R ++ V +D++ + A A Sbjct: 182 E----VDSLVLGCTHYPLLKPLLRDVAGPGVKLIDSALTTAELA 221 >gi|317057059|ref|YP_004105526.1| glutamate racemase [Ruminococcus albus 7] gi|315449328|gb|ADU22892.1| glutamate racemase [Ruminococcus albus 7] Length = 273 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 26/238 (10%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + NS I +FDSG+GGL ++++ L+P +Y+ D PYG + R + Sbjct: 1 MNNSPIGVFDSGVGGLTCVKELTKLLPHEDIVYLGDTARVPYGTRSKETI-ARYTAQDME 59 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELR---STFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 L + + ++AC TA ++I +T PS + G V PA A A T++G I ++ Sbjct: 60 FLRGHDVKMILVACGTASSVIMSSPEFSGNTEPS--YSGVVKPAANAACAATKNGRIGVI 117 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-IKEDEIKKEIEGCFI 185 +T AT+R +I S + + + VE G I +E C Sbjct: 118 ATGATIRSGSYGKVIRSIDPDAKVIGKACPMFVPLVENGYVGKDCIPTRYFAEEYLECMK 177 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFR--------------QLSPWPVDWLDNSDSIARR 229 ++ D ++L CTHYPL+ + +L+ + V L SDS+A R Sbjct: 178 REQ---VDTLILGCTHYPLLADLISDIMGDGVKLISAGAELARFAVKTLTFSDSLADR 232 >gi|225175994|ref|ZP_03729986.1| glutamate racemase [Dethiobacter alkaliphilus AHT 1] gi|225168582|gb|EEG77384.1| glutamate racemase [Dethiobacter alkaliphilus AHT 1] Length = 267 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 15/236 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG GGL VL +P F+Y D PYG+ ++ L +++L + Sbjct: 11 IGFFDSGAGGLTVLASAVKCLPNESFLYFGDTAHAPYGSRPVEDVRN-LSVQAAEMLCRQ 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + LR P + +G PA+K A A G + +++TP TL+ Sbjct: 70 GCKALVVACNTATSAAVHVLREMLP-IPVIGMEPAVKPALA--GGGKVLVMATPLTLKEE 126 Query: 136 YTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L + ++ ++ L VE + + +++ + F + Sbjct: 127 KFKALCDRCGADESNVIVLPCPGLVEMVERG----ETEGPAVERALAQLFAGADLTGVSA 182 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLD-NSDSIARRARC-----LLPRINTHQTRV 244 +VL CTHY + + P V ++D N ++ + AR LL T QT V Sbjct: 183 VVLGCTHYLFLRRALAGILPADVKFVDGNLGTVKQLARILKKEGLLREEKTSQTNV 238 >gi|149194034|ref|ZP_01871132.1| glutamate racemase [Caminibacter mediatlanticus TB-2] gi|149135987|gb|EDM24465.1| glutamate racemase [Caminibacter mediatlanticus TB-2] Length = 245 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 10/199 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL V +++ IY D PYGN + + R + L + Sbjct: 6 IFDSGVGGLSVAREILKSKLFDEIIYFGDTARVPYGNKNESTII-RYSLECLEFLKNFNI 64 Query: 78 VLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACN+A ++ +ELR +FP + + A IK ++ I ++ T T+ + Sbjct: 65 DFLVVACNSASSVAIEELRKEVSFPVVGVIEA--GIKAIENENKNSNILLIGTKRTISSS 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 N + S + +I +++ +L VEE KI +D E F + ++ D+I Sbjct: 123 KYQNALIS-LGFKNIISIATPLLVPLVEEGIVEGKIVDDIF----EMYFRNLDKEKIDII 177 Query: 196 VLACTHYPLIVHVFRQLSP 214 +L CTHYP + F++ P Sbjct: 178 ILGCTHYPFLEKSFKKHFP 196 >gi|116629100|ref|YP_814272.1| glutamate racemase [Lactobacillus gasseri ATCC 33323] gi|116094682|gb|ABJ59834.1| glutamate racemase [Lactobacillus gasseri ATCC 33323] Length = 283 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 43/264 (16%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ K+ Sbjct: 18 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRS----KE 65 Query: 63 RLMFLFSD----ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117 ++ L D +L K ++ + CNTA + ++ P + +G V + AAA Sbjct: 66 EIISLTRDSVNFLLSKDVKII-IFGCNTATAVAMSTIKKEIP-LQIIGVVQSGALAAART 123 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--- 174 T++ ++++ T AT+ HSY+ + I I S + +ED Sbjct: 124 TETKNVAVIGTKATVNS-------HSYLKE--IQYRDPKIQVSEFAQPKLAPLAEEDPAE 174 Query: 175 EIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 EIK+ + + K D +VL CTHYPL+ + +D +D +A+ + Sbjct: 175 EIKQAVVSESLAPLKKADYDTLVLGCTHYPLLRKEIVAVVGQDRKIVDPADQVAQYTYNV 234 Query: 234 LPRINTHQTRVFDDHALFLSGKPD 257 L R LF +G D Sbjct: 235 LRR-----------DGLFAAGNSD 247 >gi|197693736|gb|ACH71537.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D Y Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPY 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQIK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 173 LPEVVILGCTHFPLIAH 189 >gi|258451847|ref|ZP_05699868.1| glutamate racemase [Staphylococcus aureus A5948] gi|257860455|gb|EEV83282.1| glutamate racemase [Staphylococcus aureus A5948] Length = 266 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 17/252 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ I I + K Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYS--------DPTITSIVIHQTLK 170 Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV- 244 R +D ++L CTHYPL+ + + AR LL N H + Sbjct: 171 RWCNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTE 230 Query: 245 FDDHALFLSGKP 256 DH F +G P Sbjct: 231 HPDHRFFATGDP 242 >gi|15924141|ref|NP_371675.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50] gi|15926734|ref|NP_374267.1| glutamate racemase [Staphylococcus aureus subsp. aureus N315] gi|21282762|ref|NP_645850.1| glutamate racemase [Staphylococcus aureus subsp. aureus MW2] gi|49485988|ref|YP_043209.1| glutamate racemase [Staphylococcus aureus subsp. aureus MSSA476] gi|57650260|ref|YP_186024.1| glutamate racemase [Staphylococcus aureus subsp. aureus COL] gi|87161415|ref|YP_493747.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194852|ref|YP_499650.1| glutamate racemase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267642|ref|YP_001246585.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH9] gi|150393697|ref|YP_001316372.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH1] gi|151221275|ref|YP_001332097.1| glutamate racemase [Staphylococcus aureus subsp. aureus str. Newman] gi|156979472|ref|YP_001441731.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu3] gi|161509325|ref|YP_001574984.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140452|ref|ZP_03564945.1| glutamate racemase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317067|ref|ZP_04840280.1| glutamate racemase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731764|ref|ZP_04865929.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733613|ref|ZP_04867778.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH130] gi|255005936|ref|ZP_05144537.2| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795120|ref|ZP_05644099.1| glutamate racemase [Staphylococcus aureus A9781] gi|258407172|ref|ZP_05680321.1| glutamate racemase [Staphylococcus aureus A9763] gi|258421737|ref|ZP_05684658.1| glutamate racemase [Staphylococcus aureus A9719] gi|258432919|ref|ZP_05688608.1| glutamate racemase [Staphylococcus aureus A9299] gi|258443409|ref|ZP_05691752.1| glutamate racemase [Staphylococcus aureus A8115] gi|258446082|ref|ZP_05694244.1| glutamate racemase [Staphylococcus aureus A6300] gi|258449805|ref|ZP_05697903.1| glutamate racemase [Staphylococcus aureus A6224] gi|258454904|ref|ZP_05702867.1| glutamate racemase [Staphylococcus aureus A5937] gi|262048731|ref|ZP_06021613.1| glutamate racemase [Staphylococcus aureus D30] gi|262051669|ref|ZP_06023888.1| glutamate racemase [Staphylococcus aureus 930918-3] gi|269202763|ref|YP_003282032.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED98] gi|282894178|ref|ZP_06302409.1| glutamate racemase [Staphylococcus aureus A8117] gi|282919928|ref|ZP_06327657.1| glutamate racemase [Staphylococcus aureus A9765] gi|282928673|ref|ZP_06336270.1| glutamate racemase [Staphylococcus aureus A10102] gi|284024075|ref|ZP_06378473.1| glutamate racemase [Staphylococcus aureus subsp. aureus 132] gi|294848141|ref|ZP_06788888.1| glutamate racemase [Staphylococcus aureus A9754] gi|295405955|ref|ZP_06815764.1| glutamate racemase [Staphylococcus aureus A8819] gi|296275637|ref|ZP_06858144.1| glutamate racemase [Staphylococcus aureus subsp. aureus MR1] gi|297208211|ref|ZP_06924641.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912288|ref|ZP_07129731.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH70] gi|304381292|ref|ZP_07363945.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54037867|sp|P63638|MURI_STAAN RecName: Full=Glutamate racemase gi|54037868|sp|P63639|MURI_STAAW RecName: Full=Glutamate racemase gi|54041261|sp|P63637|MURI_STAAM RecName: Full=Glutamate racemase gi|56749202|sp|Q6GA64|MURI_STAAS RecName: Full=Glutamate racemase gi|71151976|sp|Q5HGT3|MURI_STAAC RecName: Full=Glutamate racemase gi|122539773|sp|Q2FZC6|MURI_STAA8 RecName: Full=Glutamate racemase gi|123486328|sp|Q2FHT1|MURI_STAA3 RecName: Full=Glutamate racemase gi|166231056|sp|A7X179|MURI_STAA1 RecName: Full=Glutamate racemase gi|172048828|sp|A6QG53|MURI_STAAE RecName: Full=Glutamate racemase gi|189030372|sp|A6U0W7|MURI_STAA2 RecName: Full=Glutamate racemase gi|189030373|sp|A5IS36|MURI_STAA9 RecName: Full=Glutamate racemase gi|189030374|sp|A8Z1T2|MURI_STAAT RecName: Full=Glutamate racemase gi|13700950|dbj|BAB42246.1| glutamate racemase [Staphylococcus aureus subsp. aureus N315] gi|14246921|dbj|BAB57313.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50] gi|21204200|dbj|BAB94898.1| glutamate racemase [Staphylococcus aureus subsp. aureus MW2] gi|49244431|emb|CAG42859.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus MSSA476] gi|57284446|gb|AAW36540.1| glutamate racemase [Staphylococcus aureus subsp. aureus COL] gi|87127389|gb|ABD21903.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202410|gb|ABD30220.1| glutamate racemase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740711|gb|ABQ49009.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH9] gi|149946149|gb|ABR52085.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH1] gi|150374075|dbj|BAF67335.1| glutamate racemase [Staphylococcus aureus subsp. aureus str. Newman] gi|156721607|dbj|BAF78024.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu3] gi|160368134|gb|ABX29105.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724493|gb|EES93222.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728412|gb|EES97141.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH130] gi|257789092|gb|EEV27432.1| glutamate racemase [Staphylococcus aureus A9781] gi|257841327|gb|EEV65772.1| glutamate racemase [Staphylococcus aureus A9763] gi|257842070|gb|EEV66498.1| glutamate racemase [Staphylococcus aureus A9719] gi|257849359|gb|EEV73336.1| glutamate racemase [Staphylococcus aureus A9299] gi|257851499|gb|EEV75438.1| glutamate racemase [Staphylococcus aureus A8115] gi|257855140|gb|EEV78081.1| glutamate racemase [Staphylococcus aureus A6300] gi|257856725|gb|EEV79628.1| glutamate racemase [Staphylococcus aureus A6224] gi|257862784|gb|EEV85549.1| glutamate racemase [Staphylococcus aureus A5937] gi|259160404|gb|EEW45429.1| glutamate racemase [Staphylococcus aureus 930918-3] gi|259163187|gb|EEW47747.1| glutamate racemase [Staphylococcus aureus D30] gi|262075053|gb|ACY11026.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED98] gi|269940644|emb|CBI49023.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus TW20] gi|282589712|gb|EFB94798.1| glutamate racemase [Staphylococcus aureus A10102] gi|282594644|gb|EFB99628.1| glutamate racemase [Staphylococcus aureus A9765] gi|282763664|gb|EFC03793.1| glutamate racemase [Staphylococcus aureus A8117] gi|285816830|gb|ADC37317.1| Glutamate racemase [Staphylococcus aureus 04-02981] gi|294824941|gb|EFG41363.1| glutamate racemase [Staphylococcus aureus A9754] gi|294969390|gb|EFG45410.1| glutamate racemase [Staphylococcus aureus A8819] gi|296886950|gb|EFH25853.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|298694438|gb|ADI97660.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED133] gi|300886534|gb|EFK81736.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH70] gi|302332758|gb|ADL22951.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus JKD6159] gi|302750973|gb|ADL65150.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340275|gb|EFM06216.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829543|emb|CBX34385.1| glutamate racemase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128549|gb|EFT84554.1| glutamate racemase [Staphylococcus aureus subsp. aureus CGS03] gi|315196875|gb|EFU27218.1| glutamate racemase [Staphylococcus aureus subsp. aureus CGS01] gi|320141035|gb|EFW32882.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143092|gb|EFW34882.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA177] gi|323440701|gb|EGA98411.1| glutamate racemase [Staphylococcus aureus O11] gi|323442356|gb|EGA99985.1| glutamate racemase [Staphylococcus aureus O46] gi|329313818|gb|AEB88231.1| Glutamate racemase [Staphylococcus aureus subsp. aureus T0131] gi|329725174|gb|EGG61663.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21172] gi|329728845|gb|EGG65266.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21193] gi|329730728|gb|EGG67107.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21189] Length = 266 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 9/248 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189 T++ I +H V+ VE+ ++ + I + +++ Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQ----MRYSDPTITSIVIHQTLKRWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248 +D ++L CTHYPL+ + + AR LL N H + DH Sbjct: 175 SESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDH 234 Query: 249 ALFLSGKP 256 F +G P Sbjct: 235 RFFATGDP 242 >gi|111220958|ref|YP_711752.1| glutamate racemase [Frankia alni ACN14a] gi|111148490|emb|CAJ60161.1| Glutamate racemase [Frankia alni ACN14a] Length = 306 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 8/195 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL V + + +P +Y+ D PYG +++ + ++D+ Sbjct: 6 VGVFDSGVGGLTVARAILDQLPHEPLVYLGDTGRAPYGPRPIAEVRRYALECLDRLVDEG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134 +L VIACNTA + R + +PA ++A A T+SG + ++ T AT+ R Sbjct: 66 VKLL-VIACNTASAACLRDARERYSVPVVEVIMPATRRAVAATRSGRVGVIGTVATIGSR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++ + + L + + + V+ GI ++ E + D Sbjct: 125 AYD----DAFTAAAGVDL-TGVACPAFVDFVERGITSGR-QLLGLTEAYLAPLQEADVDT 178 Query: 195 IVLACTHYPLIVHVF 209 ++L CTHYPL+ V Sbjct: 179 VILGCTHYPLLTGVI 193 >gi|281425969|ref|ZP_06256882.1| glutamate racemase [Prevotella oris F0302] gi|281399862|gb|EFB30693.1| glutamate racemase [Prevotella oris F0302] Length = 278 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 17/203 (8%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFS 69 I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + ++ +M LF Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQAVMKLF- 67 Query: 70 DILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123 + L ++ CNTA ++ + +L + PS LG + P + T++ + Sbjct: 68 ----ELGCHLVILGCNTASAKALRSIQRTDLPNLDPSRRVLGVIRPTAEIIGTLTKNNHV 123 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T++ I + + V+ VE + +KK I+ Sbjct: 124 GLLATEGTVKSHSYDLEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRIDEL 183 Query: 184 FIEKEGKRTDVIVLACTHYPLIV 206 + D I+L CTHYP+++ Sbjct: 184 MLHD--PDIDTIILGCTHYPILM 204 >gi|323465948|gb|ADX69635.1| Glutamate racemase [Lactobacillus helveticus H10] Length = 267 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 41/269 (15%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I + DSG+GG V++K+ +P +++ D PYG+ + Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVKKVIEKLPHESTVFIGDSANMPYGDKSREQIIE 52 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117 ++ + FL + L + ACNTA + L++ +G + + AAA Sbjct: 53 LTRRSVKFLLQKKVK-----LIIFACNTATAVAMPTLQNEV-EQQIIGVIQSGSLAAART 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--- 174 T++ +++ +TP T+ H+Y + ++ E A I+ ++D Sbjct: 107 TKNKKVAVAATPVTINS-------HAYQKEIKFRDPDIKVMEVAAPELAPLIESQKDYDT 159 Query: 175 ---EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +K+ I + + D VL CTHYPLI + F + + +D +D +A+ Sbjct: 160 NLAAVKRSIAPL----KDQDFDTFVLGCTHYPLIQNEFAEALGDKIQIVDPADQVAQYTF 215 Query: 232 CLLPRINTHQTRVFDD---HALFLSGKPD 257 ++ R + FD H + +G PD Sbjct: 216 NVMRRDGLFSS--FDQAGKHEYYTTGDPD 242 >gi|332653705|ref|ZP_08419449.1| glutamate racemase [Ruminococcaceae bacterium D16] gi|332516791|gb|EGJ46396.1| glutamate racemase [Ruminococcaceae bacterium D16] Length = 278 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 9/207 (4%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 V +++R +P + +Y D PYGN + ++ D + + Q ++ACNT Sbjct: 20 VARRVRRQLPNENILYFGDGGNNPYGNHTAEEILSLTRYML-DFMRQRQVKALLVACNTI 78 Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147 LI DE R L V A ++AA+ + ++ST T LI + Sbjct: 79 SCLI-DEYRREM-DCPVLSVVQAGAESAAHRPEKRVGVISTCFTASTGCYPALIAQLAPE 136 Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 + LA+ VE A +I E E+++ ++G + + + +LACTHYPL+ Sbjct: 137 KKVFSRGYKNLAAMVEHGASQQEIDE-ELRENLDGLVHQDQ---VECCLLACTHYPLVEE 192 Query: 208 VFRQLSPWPVDWLDNSDSIARR-ARCL 233 R+L P + +D +D +AR RCL Sbjct: 193 NIRRLYPQ-LQLVDPADRMARELERCL 218 >gi|124023594|ref|YP_001017901.1| aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. MIT 9303] gi|123963880|gb|ABM78636.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. MIT 9303] Length = 268 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 20/223 (8%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+++ + +Y+ D PYGN H ++ + + D+ Q Sbjct: 7 LFDSGLGGLTVLRRVLERHGQVSCLYLGDTARVPYGNRMPHEIRVIAKEVVQWLRDQ-QV 65 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA---IKQAAAYTQSGLISILSTPATLRR 134 V+ACNT L D + A G +P I+ AA + +L+T Sbjct: 66 TAVVMACNTTNALASDV------AEAVAGGIPVVRLIEAAANMLSEARVGVLAT------ 113 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIEKEGKR 191 + +Y Q I +M++ + I ++ +E+ + + Sbjct: 114 -PAAAASGAYGKQIEISRPGTMVIEQGCPAFVPLIETGQLSSEELYQAAREYLNPLLAAQ 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + +VL CTHYPL+ + RQ+ P V +D + +AR LL Sbjct: 173 VEAVVLGCTHYPLLEPILRQILPQDVRLIDPAIGVARELDVLL 215 >gi|317179086|dbj|BAJ56874.1| glutamate racemase [Helicobacter pylori F30] Length = 255 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT+R N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H LS P V++L ++ + A Sbjct: 170 LKILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|260579687|ref|ZP_05847548.1| glutamate racemase [Corynebacterium jeikeium ATCC 43734] gi|258602179|gb|EEW15495.1| glutamate racemase [Corynebacterium jeikeium ATCC 43734] Length = 288 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 36/235 (15%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E+ I +FDSG+GGL V + + +P + +Y+ D PYG+ + A + L Sbjct: 18 EQANNAPIGVFDSGVGGLTVARAIVDQLPHENLVYIGDTANSPYGD-KPLARVRELSIGI 76 Query: 69 SDILDKYQPVLSVIACNTAFT-LIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 +D L + + V+ACN+A + I+D R + P + + +PA+++AAA T++G I ++ Sbjct: 77 ADTLAERGCKMIVVACNSASSAFIRDARERYSIPVVEVI--LPAVRRAAAATRNGKIGVI 134 Query: 127 STPATLRRTYTSNL------IHSYVSQC-------HIHLVSSMILASRVEEYACGIKIKE 173 T AT+ +L + +Y C + S L E Y +K Sbjct: 135 GTQATVSSRSYQDLFAAIPGVEAYAQACPQFVPFVERGMTSGRQLMGLAENYLAPLK--- 191 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 EG D +VL CTHYPL+ V + + V +++++ A+ Sbjct: 192 -------------AEG--VDTVVLGCTHYPLLAGVVQLVMGEDVTLINSAEETAK 231 >gi|239629726|ref|ZP_04672757.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239528412|gb|EEQ67413.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 578 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 16/252 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L Sbjct: 97 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 156 Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 K+ +L VIACNT A LIK L + +G + P + A TQ+G I I++ Sbjct: 157 KKHIKML-VIACNTATAAALPLIKANL-----DIPVIGVIKPGSRAALKATQTGHIGIIA 210 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + + + I +++ S VE I + + ++ E Sbjct: 211 TEGTVKSGAYVKALRAKAPKIRITSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHED 270 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246 D ++L CTHYP++ + + + V +D+ LL + + + Sbjct: 271 ----IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTP 326 Query: 247 DHALFLSGKPDI 258 H + +G P + Sbjct: 327 THEYYTTGAPSM 338 >gi|281491802|ref|YP_003353782.1| glutamate racemase [Lactococcus lactis subsp. lactis KF147] gi|281375516|gb|ADA65026.1| Glutamate racemase [Lactococcus lactis subsp. lactis KF147] Length = 271 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 22/236 (9%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V +++ +P +Y+ D PYG + Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + + +L K ++ V+ACNT A ++K++L + GA AI++ T Sbjct: 53 FTWDMVNFLLSKDVKMI-VMACNTATAMALEIVKEKLDIPVIGVILPGASSAIQK----T 107 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ I +++T A++R I S ++ ++ S VE E EI + Sbjct: 108 KTNKIGVIATQASIRSDEYHKTIARKSSAVEVYSLACQKFVSIVESNEM-----ESEIAR 162 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++ + + D ++L CTHYPL+ + ++ V +D+ R LL Sbjct: 163 KVVSESLVPLIGKVDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLL 218 >gi|134097799|ref|YP_001103460.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338] gi|291005565|ref|ZP_06563538.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338] gi|189030368|sp|A4F910|MURI_SACEN RecName: Full=Glutamate racemase gi|133910422|emb|CAM00535.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338] Length = 271 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 8/196 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P YV D PYG ++ R + + ++ + Sbjct: 6 IGIFDSGVGGLTVARAIMDQLPGEALRYVGDTANAPYGPRPLADIRARTLAITDSLVAEG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134 +L VIACN+A + R + +PA+++A A T++G + ++ T AT+ R Sbjct: 66 VKML-VIACNSASAACLRDARERYDVPVVEVVLPAVRRAVATTRNGRVGVIGTQATITSR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++ + + L S R ++ ++ + + D Sbjct: 125 AYD----DAFTAAPGVTL--STAACPRFADFVERGITSGRQVLGLAQAYLDPLQQADVDT 178 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHYPL+ V + Sbjct: 179 LVLGCTHYPLLTGVLQ 194 >gi|68535566|ref|YP_250271.1| glutamate racemase [Corynebacterium jeikeium K411] gi|68263165|emb|CAI36653.1| murI [Corynebacterium jeikeium K411] Length = 288 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 36/228 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P + +Y+ D PYG+ + A + L +D L + Sbjct: 25 IGVFDSGVGGLTVARAIVDQLPHENLVYIGDTANSPYGD-KPLAQVRELSIRIADTLAER 83 Query: 76 QPVLSVIACNTAFT-LIKDEL-RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + V+ACN+A + I+D R + P + + +PA+++AAA T++G I ++ T AT+ Sbjct: 84 GCKMIVVACNSASSAFIRDARERYSIPVVEVI--LPAVRRAAAATRNGRIGVIGTQATVN 141 Query: 134 RTYTSNL------IHSYVSQC-------HIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +L + +Y C + S L E Y +K Sbjct: 142 SMSYQDLFAAIPGVEAYAQACPQFVPFVERGMTSGRQLMGLAENYLAPLK---------- 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + D +VL CTHYPL+ V + + V +++++ A+ Sbjct: 192 --------AQGVDTVVLGCTHYPLLTGVVQLVMGEDVTLINSAEETAK 231 >gi|297162715|gb|ADI12427.1| putative glutamate racemase [Streptomyces bingchenggensis BCW-1] Length = 274 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 79/196 (40%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L + L P+ + +D P+G + +R + + Sbjct: 3 IALMDSGIGLLPAAAAVHRLRPDADLVLSSDPGSMPWGPRTPEDVTQRALACVR-AAAAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ P + +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIVACNTASVHALSALRAELEPGLPVIGTVPAIKPAAA--GGGPVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V+ LA V+ + + Sbjct: 120 PYQRRLISDFADGVTVTEVACPGLAEAVQRADSAAIDAAVADAA-------ARTPRDIRA 172 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 173 LVLGCTHYELVADRIR 188 >gi|83589382|ref|YP_429391.1| glutamate racemase [Moorella thermoacetica ATCC 39073] gi|83572296|gb|ABC18848.1| glutamate racemase [Moorella thermoacetica ATCC 39073] Length = 276 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 14/248 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL V +++ +P IY D PYG+ L + ++ Sbjct: 5 QPVGVFDSGVGGLTVAREITRQLPAETIIYFGDTAHVPYGSRPVDELIHFADTIVGFLIA 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + + V ACNT + L+ + S+ +G + P ++ A T++G I +++T AT+ Sbjct: 65 RGAKAI-VDACNTTSAVALPYLQQKY-SIPIIGVIEPGVEAALQATKNGRIGVIATEATI 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + S + + + VE GI + ++ + C Sbjct: 123 ASDAHRRALLSRGKEVQVFTRACPPFVPLVE---AGI-VAGPRVEGVVAECLESLLQAGI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFDDH 248 D ++L CTHYP + V + L+ V +D + + R + +L H +R H Sbjct: 179 DTLILGCTHYPFLAPVIQDLAGPGVTLVDPAAATVRELKSVLAAGGGLRGPHGSRA---H 235 Query: 249 ALFLSGKP 256 ++SG P Sbjct: 236 EFYVSGDP 243 >gi|89256134|ref|YP_513496.1| glutamate racemase [Francisella tularensis subsp. holarctica LVS] gi|115314607|ref|YP_763330.1| glutamate racemase [Francisella tularensis subsp. holarctica OSU18] gi|156502156|ref|YP_001428221.1| glutamate racemase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009837|ref|ZP_02274768.1| glutamate racemase [Francisella tularensis subsp. holarctica FSC200] gi|290953270|ref|ZP_06557891.1| glutamate racemase [Francisella tularensis subsp. holarctica URFT1] gi|295313512|ref|ZP_06804107.1| glutamate racemase [Francisella tularensis subsp. holarctica URFT1] gi|89143965|emb|CAJ79186.1| glutamate racemase [Francisella tularensis subsp. holarctica LVS] gi|115129506|gb|ABI82693.1| glutamate racemase [Francisella tularensis subsp. holarctica OSU18] gi|156252759|gb|ABU61265.1| glutamate racemase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 265 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL +++ + ++P IY D PYG ++K Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQK 53 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + ++D+ + +IACNT + KD ++ ++ + + A + Sbjct: 54 FAVQTAKFLIDQEVKAI-IIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++TPAT+ + IH ++ + S +EE I E + KE Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVE-LVAKEYLS 169 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 F K ++L CTHYP+I Sbjct: 170 YF---HDKNIQTLILGCTHYPII 189 >gi|257869444|ref|ZP_05649097.1| glutamate racemase [Enterococcus gallinarum EG2] gi|257803608|gb|EEV32430.1| glutamate racemase [Enterococcus gallinarum EG2] Length = 270 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 16/243 (6%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++ +P H IY+ D PYG + + + ++ L + Sbjct: 10 IDSGVGGLTVVKEAIKQLPNEHIIYLGDTARCPYGPRPAEQVIE-YTWQMTEFLLQQNIK 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNTA + +E++ S+ +G + P + A T++ I ++ T T++ Sbjct: 69 MLVIACNTATAVALEEIKEKL-SIPVIGVILPGSRAAVKATKNQQIGVIGTAGTIKS--- 124 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE---IKKEIEGCFIEKEGKRTDV 194 ++Y + S++++ ++A ++ + + KK + + K+ D Sbjct: 125 ----NAYEEAIKLKSPRSVVVSLACPKFAPIVESNQAQSSVAKKIVAETLRPLKNKKLDT 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALF 251 ++L CTHYPL+ + + + +D+ LL NT Q ++ + Sbjct: 181 LILGCTHYPLLRSLIQNEMGSQIQLIDSGAETVGEVSMLLDYFAIANTSQMTQEPEYFFY 240 Query: 252 LSG 254 +G Sbjct: 241 TTG 243 >gi|24113787|ref|NP_708297.1| glutamate racemase [Shigella flexneri 2a str. 301] gi|24052869|gb|AAN44004.1| similar to glutamate racemase [Shigella flexneri 2a str. 301] gi|281601863|gb|ADA74847.1| glutamate racemase [Shigella flexneri 2002017] gi|332766260|gb|EGJ96470.1| glutamate racemase [Shigella flexneri 2930-71] Length = 273 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 ++ I + DSG+GGL ++++ L+P IY D++ PYGN + KK L FL Sbjct: 9 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFLQ 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124 S + L +ACNT + ++ E S +FP L + + Q + Sbjct: 69 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 122 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 I++T T++ LI S ++ S LA +EE ++IKK + Sbjct: 123 IIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 182 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 + I+L CTHYP++ + F ++P Sbjct: 183 ---SLHPVNEIILGCTHYPIVQNFFEAVAP 209 >gi|197693646|gb|ACH71492.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG +D A K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPATIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|29827966|ref|NP_822600.1| glutamate racemase [Streptomyces avermitilis MA-4680] gi|29605067|dbj|BAC69135.1| putative glutamate racemase [Streptomyces avermitilis MA-4680] Length = 261 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 80/196 (40%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + +R + + + Sbjct: 3 IALLDSGIGLLAAAAAVRRLRPDADLVLSSDPASVPWGPRTPQDVTERSLAVAE-AAAAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P + ACNT LR+ F P + +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIAACNTMSVHALPALRARFEPGLPVIGTVPAIKPAAA--SGGPVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE E+ V Sbjct: 120 PYQRGLIREFADGVAVTEVPCPGLADAVEHANEAAIDAAIAAAA-------ERTPDDVRV 172 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 173 VVLGCTHYELVAERIR 188 >gi|239983757|ref|ZP_04706281.1| glutamate racemase [Streptomyces albus J1074] gi|291455563|ref|ZP_06594953.1| glutamate racemase [Streptomyces albus J1074] gi|291358512|gb|EFE85414.1| glutamate racemase [Streptomyces albus J1074] Length = 261 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 78/196 (39%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G L + + + Sbjct: 3 IALVDSGIGLLPAAAAVRRLRPDADLVLSSDPDSMPWGPRTPEDLSAHALAVAEAAAEHA 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA LR F P + +G VPAIK AAA G ++I +TPAT Sbjct: 63 PDAL-VVACNTASVHALPALRERFEPGLPVIGTVPAIKPAAA--AGGHVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V+ LA V+ + + Sbjct: 120 PYQRRLIAEFSGSTPVTEVACPGLADAVQ-------WDDPTAVAAAIADAAARTPSTVTS 172 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 173 VVLGCTHYELVGDAIR 188 >gi|294786553|ref|ZP_06751807.1| glutamate racemase [Parascardovia denticolens F0305] gi|294485386|gb|EFG33020.1| glutamate racemase [Parascardovia denticolens F0305] Length = 273 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 105/264 (39%), Gaps = 26/264 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V++++R MP+ I+ D PYG + + L F +D L K Sbjct: 17 IGVFDSGMGGISVVRQLRRDMPDQDIIFFGDSANAPYGTRPINEVTD-LSFAVADRLVKQ 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST------- 128 VIACNTA + LR + + +G PA+K A Q +L T Sbjct: 76 GVKAIVIACNTATSACAPLLRRHY-DIPIIGMEPALKVAIDRGQGKSQHVLVTATKLTLE 134 Query: 129 ----PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 A + R +N+I + + LV + L R + + IE Sbjct: 135 GRKFAALMDRERGNNIIETQPCPDLVTLVEADDLGDR------------ELVLSTIERYL 182 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + D IVL CTH+ FR++ P +D + +R + +L R Sbjct: 183 RPFDLDSLDSIVLGCTHFVFYRRYFREILPDYAAIIDGNQGTSRHVQEVLGYQGKSAERA 242 Query: 245 FDDHALFL-SGKPDIAMRRLMQGF 267 + L + K D LMQ Sbjct: 243 AGKGTVILQNSKTDPQTAALMQAL 266 >gi|254369138|ref|ZP_04985150.1| hypothetical protein FTAG_00072 [Francisella tularensis subsp. holarctica FSC022] gi|157122088|gb|EDO66228.1| hypothetical protein FTAG_00072 [Francisella tularensis subsp. holarctica FSC022] Length = 265 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL +++ + ++P IY D PYG ++K Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQK 53 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + ++D+ + +IACNT + KD ++ ++ + + A + Sbjct: 54 FAVQTAKFLIDQEVKAI-IIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++TPAT+ + IH ++ + S +EE I E + KE Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVE-LVAKEYLS 169 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 F K ++L CTHYP+I Sbjct: 170 YF---HDKNIQALILGCTHYPII 189 >gi|333001587|gb|EGK21155.1| glutamate racemase [Shigella flexneri VA-6] Length = 269 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 ++ I + DSG+GGL ++++ L+P IY D++ PYGN + KK L FL Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFLQ 64 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124 S + L +ACNT + ++ E S +FP L + + Q + Sbjct: 65 SRNVK-----LVAVACNTISSTLESEKYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 118 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 I++T T++ LI S ++ S LA +EE ++IKK + Sbjct: 119 IIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 + I+L CTHYP++ + F ++P Sbjct: 179 ---SLHPVNEIILGCTHYPIVQNFFEAVAP 205 >gi|226305260|ref|YP_002765218.1| glutamate racemase [Rhodococcus erythropolis PR4] gi|226184375|dbj|BAH32479.1| glutamate racemase [Rhodococcus erythropolis PR4] Length = 254 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 19/219 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L P+ + D G P+G + + R++ LD+ Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLVLSLDPDGAPWGPKPEPWVVDRVLGAVRRSLDRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ V+ CNTA +R P + +G VPAIK AAA S ++I +T AT Sbjct: 63 AQVI-VLPCNTASVTALPHVRELVGPEVPVIGTVPAIKPAAAACDS--VAIWATAATTAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-- 192 Y ++LI + + + V LA + D + I+ RT Sbjct: 120 RYQADLIEQFGNGAKVVGVPCHGLADSI-----------DLGDRAAALAAIDSAVARTPD 168 Query: 193 DV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 DV +VL CTHYPL+ P V D+++++AR+ Sbjct: 169 DVSGVVLGCTHYPLLADEIAARLPAGVTLFDSAEAVARQ 207 >gi|218131992|ref|ZP_03460796.1| hypothetical protein BACEGG_03615 [Bacteroides eggerthii DSM 20697] gi|217985868|gb|EEC52208.1| hypothetical protein BACEGG_03615 [Bacteroides eggerthii DSM 20697] Length = 279 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 39/259 (15%) Query: 9 EKKLQNS---ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 ++KL +S I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + Sbjct: 2 KQKLPSSPGPIGVFDSGYGGLTILSKIREILPEYDYIYLGDNARAPYGT---RSFEVVYA 58 Query: 66 FLFSDILDKYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117 F + ++ L ++ACNTA ++ ++L + LG + P ++ Sbjct: 59 FTLQAVTRLFEMGCHLVILACNTASAKALRSIQINDLPHLDSARRVLGVIRPTVECIGNI 118 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKED 174 T+S + +L+T T++ S+ + + + +V AC + ++ + Sbjct: 119 TRSRHVGVLATSGTIK------------SESYPLEIRKLFPDIKVSGEACPLWVSLVENN 166 Query: 175 EIKKEIEGCFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 E + FI K + + D +L CTHYP+++ +Q P + + +A Sbjct: 167 EALGDGTDYFIRKYINELLAKDREIDTAILGCTHYPILLPKIQQYMPAGITIVSQGQLVA 226 Query: 228 RRARCLL---PRINTHQTR 243 + L P I+ TR Sbjct: 227 DSLKDYLHRHPEIDIKCTR 245 >gi|169335598|ref|ZP_02862791.1| hypothetical protein ANASTE_02013 [Anaerofustis stercorihominis DSM 17244] gi|169258336|gb|EDS72302.1| hypothetical protein ANASTE_02013 [Anaerofustis stercorihominis DSM 17244] Length = 269 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 17/197 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I I DSG+GGL V ++ L+P + IY+ D PYGN + + K + +L Sbjct: 7 IGILDSGVGGLTVFKQTERLLPNENIIYLGDTKRMPYGNKSEEEIIILANKMISYL---- 62 Query: 72 LDKYQPVLSV-IACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSGLISILST 128 + Q V +V +ACNT + I ++L S P S+ G+ A K+++ T LI +++T Sbjct: 63 --EEQDVKAVLLACNTISSHI-EKLTSKVPIFSIVKAGSELATKKSSE-TNVDLIGLIAT 118 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + IH +I S L ++ + IK+ IE I+KE Sbjct: 119 KATVNSGSYNKEIHKLNKDINIISNDSTRLPKVIDSQIENKPLLNQLIKECIEP-IIDKE 177 Query: 189 GKRTDVIVLACTHYPLI 205 K ++L C+H+P+I Sbjct: 178 -KNVKNLILGCSHFPII 193 >gi|313650908|gb|EFS15308.1| glutamate racemase [Shigella flexneri 2a str. 2457T] gi|332755494|gb|EGJ85858.1| glutamate racemase [Shigella flexneri K-671] gi|333001965|gb|EGK21531.1| glutamate racemase [Shigella flexneri K-218] Length = 269 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 ++ I + DSG+GGL ++++ L+P IY D++ PYGN + KK L FL Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFLQ 64 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124 S + L +ACNT + ++ E S +FP L + + Q + Sbjct: 65 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 118 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 I++T T++ LI S ++ S LA +EE ++IKK + Sbjct: 119 IIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 + I+L CTHYP++ + F ++P Sbjct: 179 ---SLHPVNEIILGCTHYPIVQNFFEAVAP 205 >gi|254374574|ref|ZP_04990055.1| glutamate racemase [Francisella novicida GA99-3548] gi|151572293|gb|EDN37947.1| glutamate racemase [Francisella novicida GA99-3548] Length = 265 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL +++ + ++P IY D PYG + A + Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGT-KSRATIQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + L + + +IACNT + KD ++ ++ + + A + Sbjct: 53 KFAAQTAKFLIEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++TPAT+ + IH ++ + S +EE +I E + KE Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVE-LVAKEYLS 169 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 F K +VL CTHYP+I Sbjct: 170 YF---HDKNIQALVLGCTHYPII 189 >gi|315226136|ref|ZP_07867924.1| glutamate racemase [Parascardovia denticolens DSM 10105] gi|315120268|gb|EFT83400.1| glutamate racemase [Parascardovia denticolens DSM 10105] Length = 282 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 105/264 (39%), Gaps = 26/264 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V++++R MP+ I+ D PYG + + L F +D L K Sbjct: 26 IGVFDSGMGGISVVRQLRRDMPDQDIIFFGDSANAPYGTRPINEVTD-LSFAVADRLVKQ 84 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST------- 128 VIACNTA + LR + + +G PA+K A Q +L T Sbjct: 85 GVKAIVIACNTATSACAPLLRRHY-DIPIIGMEPALKVAIDRGQGKSQHVLVTATKLTLE 143 Query: 129 ----PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 A + R +N+I + + LV + L R + + IE Sbjct: 144 GRKFAALMDRERGNNIIETQPCPDLVTLVEADDLGDR------------ELVLSTIERYL 191 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + D IVL CTH+ FR++ P +D + +R + +L R Sbjct: 192 RPFDLDSLDSIVLGCTHFVFYRRYFREILPDYAAIIDGNQGTSRHVQEVLGYQGKSAERA 251 Query: 245 FDDHALFL-SGKPDIAMRRLMQGF 267 + L + K D LMQ Sbjct: 252 AGKGTVILQNSKTDPQTAALMQAL 275 >gi|298373442|ref|ZP_06983431.1| glutamate racemase [Bacteroidetes oral taxon 274 str. F0058] gi|298274494|gb|EFI16046.1| glutamate racemase [Bacteroidetes oral taxon 274 str. F0058] Length = 282 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 9/205 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL+ + +P+Y ++Y+ D+ PYG + + + D Sbjct: 14 IGVFDSGYGGLTVLKDIIEQLPQYDYVYLGDNARTPYGTRSYEVVYGYTLQCVRRLFDMD 73 Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 ++ ++ACNTA ++ +++L P LG + P + + T++ + IL T Sbjct: 74 CRIV-ILACNTASAKALRSIQQNDLPLIAPDRRVLGVIRPTAESIGSLTKTNTVGILGTT 132 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+R I + + + +E + IKK I+ I + Sbjct: 133 GTIRSQSYEIEIKKLFPRIEVVSQECPMWVPLIENNEHLTAGADYFIKKYIDS--ILAKN 190 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSP 214 D +VL CTHYPLI + P Sbjct: 191 NNIDTLVLGCTHYPLIADSIARFVP 215 >gi|46091551|dbj|BAD13991.1| HP0549 [Helicobacter pylori] Length = 255 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 32/248 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + +Y D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIVYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234 +V++L CTH+PLI H LS P V++L ++ + A C Sbjct: 173 LPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYTLKKNA-CAF 231 Query: 235 PRINTHQT 242 P++ H + Sbjct: 232 PKVEFHAS 239 >gi|324324893|gb|ADY20153.1| glutamate racemase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 276 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLMKENI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + +H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|158317397|ref|YP_001509905.1| glutamate racemase [Frankia sp. EAN1pec] gi|229486274|sp|A8L764|MURI_FRASN RecName: Full=Glutamate racemase gi|158112802|gb|ABW14999.1| glutamate racemase [Frankia sp. EAN1pec] Length = 276 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 22/229 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P +Y+ D PYG +++ + +++ Sbjct: 6 IGVFDSGVGGLTVARAILDQLPGESLLYIGDTAHAPYGPRPIAEVRRYALAALDELVSAG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134 +L VIACN+A + R + VPA ++A A T+SG + ++ T AT+ R Sbjct: 66 VKLL-VIACNSASAACLRDARERYDVPVVEVIVPATRRAVAATRSGRVGVIGTVATITSR 124 Query: 135 TY-------TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 Y + S + V I + R ++ E Sbjct: 125 AYEDAFAAAAGTELVSVACPAFVDFVERGITSGR-------------QLLGLTEAYLAPL 171 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + D ++L CTHYPL+ V + V + +++ A+ +L R Sbjct: 172 QEADVDTVILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLAR 220 >gi|311113410|ref|YP_003984632.1| glutamate racemase [Rothia dentocariosa ATCC 17931] gi|310944904|gb|ADP41198.1| glutamate racemase [Rothia dentocariosa ATCC 17931] Length = 346 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 11/233 (4%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I +FDSG+GGL V + + +P IYV D PYG + ++ + Sbjct: 23 PAGPTSSAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 82 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGL 122 + +++D +L VIACNTA + + R + + + PA ++A A T++ Sbjct: 83 IMDELVDSGVKML-VIACNTASAAVLRDARERYTRHYGIPVIEVIQPAARRALAATRNRK 141 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +++T AT+ TS + +V S+ VE G+ E+ + E Sbjct: 142 IGVIATEATV----TSRAYEDTFAIAPNLMVQSVACPRFVEFVEKGV-TSGPELLRTAEE 196 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLL 234 + R D +VL CTHYPL+ + + V + ++D A+ R LL Sbjct: 197 YLQPLKDSRVDTLVLGCTHYPLLTGIISYIMGEGVTLVSSADETAKDVYRALL 249 >gi|224372568|ref|YP_002606940.1| glutamate racemase [Nautilia profundicola AmH] gi|223588690|gb|ACM92426.1| glutamate racemase [Nautilia profundicola AmH] Length = 245 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSGIGGL V ++ IY D PYGN + + R + L + Sbjct: 6 VFDSGIGGLSVASELLKSKLFDEIIYFGDTARVPYGNKNESTII-RYSLEALEFLKNFDI 64 Query: 78 VLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACN+A ++ DELR + FP +G + A +A ++ I + T T++ Sbjct: 65 DFLVVACNSASSVAIDELRREAGFP---VVGVIEAGVKALDAAKTSNILLTGTKRTIQSN 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIEKEGKRTDV 194 N++ Q +I V++ + VEE I E +I E+ E F + + D Sbjct: 122 KYQNMLLDLGYQ-NIISVATPLFVPLVEE-----GITEGKIVDEVFELYFGDIDKSSIDY 175 Query: 195 IVLACTHYPLIVHVFRQLSP 214 ++L CTHYP + F++ P Sbjct: 176 VILGCTHYPFLAKSFKKHFP 195 >gi|307776633|pdb|3OUT|A Chain A, Crystal Structure Of Glutamate Racemase From Francisella Tularensis Subsp. Tularensis Schu S4 In Complex With D-Glutamate. gi|307776634|pdb|3OUT|B Chain B, Crystal Structure Of Glutamate Racemase From Francisella Tularensis Subsp. Tularensis Schu S4 In Complex With D-Glutamate. gi|307776635|pdb|3OUT|C Chain C, Crystal Structure Of Glutamate Racemase From Francisella Tularensis Subsp. Tularensis Schu S4 In Complex With D-Glutamate Length = 268 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 15/203 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL +++ + ++P IY D PYG ++K Sbjct: 5 LDNRP--------IGVFDSGIGGLTIVKNLXSILPNEDIIYFGDIARIPYGTKSRATIQK 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 ++D+ + +IACNT + KD ++ ++ + + A + Sbjct: 57 FAAQTAKFLIDQEVKAI-IIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 113 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++TPAT+ + IH ++ + S +EE I E + KE Sbjct: 114 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSXIEEGFVSGHIVE-LVAKEYLS 172 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 F K ++L CTHYP+I Sbjct: 173 YF---HDKNIQALILGCTHYPII 192 >gi|297246515|ref|ZP_06930353.1| glutamate racemase [Staphylococcus aureus A8796] gi|297176621|gb|EFH35884.1| glutamate racemase [Staphylococcus aureus A8796] Length = 266 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 17/252 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQFTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ I I + K Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYS--------DPTITSIVIHQTLK 170 Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV- 244 R +D ++L CTHYPL+ + + AR LL N H + Sbjct: 171 RWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTE 230 Query: 245 FDDHALFLSGKP 256 DH F +G P Sbjct: 231 HPDHRFFATGDP 242 >gi|210614803|ref|ZP_03290332.1| hypothetical protein CLONEX_02546 [Clostridium nexile DSM 1787] gi|210150572|gb|EEA81581.1| hypothetical protein CLONEX_02546 [Clostridium nexile DSM 1787] Length = 275 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHA 59 M IDN K + +FDSG+GGL V +++ +P + +Y D PYG+ D+ Sbjct: 1 MSIDN-----KNAAPVGVFDSGVGGLTVAREIMRQLPNENLVYFGDTARVPYGSKSRDNI 55 Query: 60 LK-KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117 ++ R + F L VIACNTA L D +R + +G V P + A Sbjct: 56 IRYSRQIIHF---LKTKGVKAIVIACNTASALALDVVREE-SDIPIIGVVEPGARAALQI 111 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 TQ+ I ++ T AT++ +I + + + VEE K+ E+ I Sbjct: 112 TQTKKIGVIGTEATVQSAMYGKIIKGLDPTVSVIGKACPLFVPLVEEGFAKHKVTEEIID 171 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLI 205 + KE D ++L CTHYPL+ Sbjct: 172 YYLASM---KESD-IDSLILGCTHYPLL 195 >gi|161506994|ref|YP_001576948.1| glutamate racemase [Lactobacillus helveticus DPC 4571] gi|260102884|ref|ZP_05753121.1| glutamate racemase [Lactobacillus helveticus DSM 20075] gi|172048195|sp|A8YTR6|MURI_LACH4 RecName: Full=Glutamate racemase gi|160347983|gb|ABX26657.1| Glutamate racemase [Lactobacillus helveticus DPC 4571] gi|260083308|gb|EEW67428.1| glutamate racemase [Lactobacillus helveticus DSM 20075] Length = 267 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 41/269 (15%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I + DSG+GG V++K+ +P +++ D PYG+ + Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVKKVIEKLPHESTVFIGDSANMPYGDKSREQIIE 52 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117 ++ + FL + L + ACNTA + L++ +G + + AAA Sbjct: 53 LTRRSVKFLLQKKVK-----LIIFACNTATAVAMPTLQNEV-EQQIIGVIQSGSLAAART 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--- 174 T++ +++ +TP T+ H+Y + ++ E A I+ ++D Sbjct: 107 TKNKKVAVAATPVTINS-------HAYQKEIKFRDPDIKVMEVAAPELAPLIESQKDYDT 159 Query: 175 ---EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +K+ I + + D VL CTHYPLI + F + + +D +D +A+ Sbjct: 160 NLAAVKRSIAPL----KDQDFDTFVLGCTHYPLIQNEFVEALGDKIQIVDPADQVAQYTF 215 Query: 232 CLLPRINTHQTRVFDD---HALFLSGKPD 257 ++ R + FD H + +G PD Sbjct: 216 NVMRRDGLFSS--FDQAGKHEYYTTGDPD 242 >gi|160944622|ref|ZP_02091849.1| hypothetical protein FAEPRAM212_02135 [Faecalibacterium prausnitzii M21/2] gi|158443806|gb|EDP20810.1| hypothetical protein FAEPRAM212_02135 [Faecalibacterium prausnitzii M21/2] gi|295104374|emb|CBL01918.1| glutamate racemase [Faecalibacterium prausnitzii SL3/3] Length = 274 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 27/265 (10%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I +FDSG+GGL ++++R +P IY D PYG+ + Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPHEDIIYFGDTGRVPYGSRSPETILQ 52 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY- 117 ++ + FL S + + AC T + + P + +LG V A + AA+ Sbjct: 53 YARQDVAFLLSKNVK-----CIMAACGTVSSTYPAAEAAQLP-VPYLGVVDAAAREAAFV 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH-----LVSSMILASRVEEYACGIKIK 172 T++ I ++ T AT+R L+ V I L ++ A V+ G K Sbjct: 107 TRNRRIGVIGTAATIRSRSYEKLLRQLVPGVEITARACPLFVPLVEAGYVDHSEAG---K 163 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 + K I E D ++L CTHYPL+ + + V +D + + A Sbjct: 164 QQITKLVIAQYLTEVREAGVDTLILGCTHYPLLKSMIGEFMGPGVTLVDPAMTAAHHLER 223 Query: 233 LLPRINTHQTRVFDDHALFLSGKPD 257 +L + ++S PD Sbjct: 224 MLAERGLRASHESGQAHFYVSDVPD 248 >gi|332184267|gb|AEE26521.1| Glutamate racemase [Francisella cf. novicida 3523] Length = 265 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 17/204 (8%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL +++ + ++P IY D PYG + A+ + Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLINILPNEDIIYFGDIARIPYGT-KSRAMIQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSG 121 + + L + + +IACNT + KD ++ ++ + + A + + ++ G Sbjct: 53 KFAAQTAKFLIEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDSLSKVG 112 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +I +TPAT+ + IH ++ + S +EE +I E + KE Sbjct: 113 VI---ATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVE-LVAKEYL 168 Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205 F K ++L CTHYP+I Sbjct: 169 SYF---HDKNIQALILGCTHYPII 189 >gi|160934063|ref|ZP_02081450.1| hypothetical protein CLOLEP_02926 [Clostridium leptum DSM 753] gi|156866736|gb|EDO60108.1| hypothetical protein CLOLEP_02926 [Clostridium leptum DSM 753] Length = 271 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 29/246 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG+GGL ++++R L+P +Y D PYGN + ++ + FL S Sbjct: 7 IGVFDSGVGGLTAVKELRALLPHEDIVYFGDTSRAPYGNRSRDTILRYARQDVNFLLS-- 64 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 Q V +IA + + + + P + F G V P + A T++ I +++T A Sbjct: 65 ----QKVKMIIAACGTVSSVAASMGQSLP-VPFTGVVTPTCRAAVKATKNKRIGVIATAA 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEKE 188 T+ +++ + + + VE G ++ ++ + G Sbjct: 120 TIDSGSYRKELNALHPEIQVFEQPCPLFVPLVENAFIDPGDQVTNLVAQRYLSGL----R 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 G D ++L CTHYP+I + + V +D+ A + R+ D Sbjct: 176 GAGVDTLILGCTHYPIISAIISKAMGDQVTLIDSGRETA-----------VYAARLLKDQ 224 Query: 249 ALFLSG 254 L SG Sbjct: 225 QLLASG 230 >gi|46091437|dbj|BAD13881.1| HP0549 [Helicobacter pylori] Length = 286 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALGEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT+R N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYLMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|332678480|gb|AEE87609.1| Glutamate racemase [Francisella cf. novicida Fx1] Length = 265 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL +++ + ++P IY D PYG + A + Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGT-KSRATIQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + L + + +IACNT + KD ++ ++ + + A + Sbjct: 53 KFAAQTAKFLIEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++TPAT+ + IH ++ + S +EE +I E + KE Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGEIVE-LVAKEYLS 169 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 F K +VL CTHYP+I Sbjct: 170 YF---HDKNIQALVLGCTHYPII 189 >gi|295395118|ref|ZP_06805327.1| glutamate racemase [Brevibacterium mcbrellneri ATCC 49030] gi|294972066|gb|EFG47932.1| glutamate racemase [Brevibacterium mcbrellneri ATCC 49030] Length = 310 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 11/216 (5%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ + DSG+G + + +P + D PYG +++R + ++D Sbjct: 26 TVGLLDSGLGLVPFAVAVHHELPHANLALAMDPDFAPYGALTSAQIEQRALASARTLVDA 85 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA +R F P + +G VPA+K AAA ++ +T AT Sbjct: 86 GARAL-VIACNTASVHALSAVRERFEPLVPVIGTVPAVKPAAA--TGAPFAVWATTATTG 142 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 Y +LI Y +++ V+ LA ++ + E + + Sbjct: 143 SAYQRSLISMYAGDINVYPVACAGLAQAIDS-------ADPETIDIALSAAVTATPREAQ 195 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 IVL CTHY L+ PV D+ ++AR+ Sbjct: 196 SIVLGCTHYGLVADRIEAAFDRPVTLFDSPQAVARQ 231 >gi|224532535|ref|ZP_03673159.1| glutamate racemase [Borrelia burgdorferi WI91-23] gi|224512525|gb|EEF82902.1| glutamate racemase [Borrelia burgdorferi WI91-23] Length = 305 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y + + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMENFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKK 178 +++T TL + + Q +IH + +I+ + E EY G K+D ++ Sbjct: 156 LLIATNTTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC 204 Query: 179 EIEGCFIEKEGKRTDVIVLACTHY 202 +E E +++ L CTHY Sbjct: 205 -LEALKFEVVNTGREIVFLGCTHY 227 >gi|197693580|gb|ACH71459.1| glutamate racemase [Helicobacter pylori] gi|197693696|gb|ACH71517.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LEILPEVVILGCTHFPLIAH 189 >gi|195941838|ref|ZP_03087220.1| glutamate racemase (murI) [Borrelia burgdorferi 80a] Length = 261 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 21/198 (10%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL Sbjct: 2 KNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLIE 61 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + Y V+ACNT + ++L FP + L V ++ + +++T Sbjct: 62 KLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIATN 117 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184 TL + + Q +IH + +I+ + E EY G K+D ++ +E Sbjct: 118 TTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC-LEALK 165 Query: 185 IEKEGKRTDVIVLACTHY 202 E +++ L CTHY Sbjct: 166 FEVVNTGREIVFLGCTHY 183 >gi|229074552|ref|ZP_04207581.1| Glutamate racemase [Bacillus cereus Rock4-18] gi|228708672|gb|EEL60816.1| Glutamate racemase [Bacillus cereus Rock4-18] Length = 275 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 15/244 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS--DILD 73 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++K+ F+F + L Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYG---PRSVKEVQSFVFEMVEFLK 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T+ Sbjct: 67 QFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTI 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGK 190 + +H + +H + LA+ VE ED + ++++ + + Sbjct: 126 QSNMYEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLTKE 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D ++L CTHYPL+ ++ V + +++ A +L + H Sbjct: 180 DIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRF 239 Query: 251 FLSG 254 F +G Sbjct: 240 FTTG 243 >gi|206975573|ref|ZP_03236485.1| glutamate racemase [Bacillus cereus H3081.97] gi|222094594|ref|YP_002528654.1| glutamate racemase [Bacillus cereus Q1] gi|206746035|gb|EDZ57430.1| glutamate racemase [Bacillus cereus H3081.97] gi|221238652|gb|ACM11362.1| glutamate racemase [Bacillus cereus Q1] Length = 276 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + +H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|24215750|ref|NP_713231.1| glutamate racemase [Leptospira interrogans serovar Lai str. 56601] gi|59798407|sp|Q8F1S7|MURI_LEPIN RecName: Full=Glutamate racemase gi|24196929|gb|AAN50249.1| glutamate racemase [Leptospira interrogans serovar Lai str. 56601] Length = 256 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 9/223 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL VL+++ E +Y D PYG +D + L+ + L K Sbjct: 7 IGLMDSGMGGLSVLKELLKYDSELEIVYYGDLKNSPYGE-KDASEVLELVRSVCNFLQKE 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ACNTA + LR F S+ G PAIK A +++L+TP T R Sbjct: 66 NVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKVALLATPVTQREE 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L ++ + +S LA V++ D+ +K + + + + + Sbjct: 125 KLQRLKSELKAEELVLSISCPGLAGLVDQGDF------DKAEKYLRPILANLQEQDVENL 178 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-LPRI 237 VL CTHY + + + P + NS +I L +PR+ Sbjct: 179 VLGCTHYVFLKQIILKNFPNVKIYDGNSGTIKHLLNSLQVPRV 221 >gi|10955413|ref|NP_053125.1| hypothetical protein pB171_063 [Escherichia coli] gi|6009439|dbj|BAA84898.1| orf63 [Escherichia coli] Length = 273 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 ++ I + DSG+GGL ++++ L+P IY D+ PYGN + KK L FL Sbjct: 9 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFLQ 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124 S + L +ACNT + ++ E S +FP L + + Q + Sbjct: 69 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 122 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 I++T T++ LI +I S LA +EE ++IKK + Sbjct: 123 IIATEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 182 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 + I+L CTHYP++ ++F ++P Sbjct: 183 ---SLHPVNEIILGCTHYPIVQNLFEAVAP 209 >gi|197693692|gb|ACH71515.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T Sbjct: 59 KPHKIGLLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LEILPEVVILGCTHFPLIAH 189 >gi|227548659|ref|ZP_03978708.1| glutamate racemase [Corynebacterium lipophiloflavum DSM 44291] gi|227079273|gb|EEI17236.1| glutamate racemase [Corynebacterium lipophiloflavum DSM 44291] Length = 258 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 6/193 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + M + IY+ D PYG ++ R + +++++ Sbjct: 1 MFDSGLGGLTVARAMMDQLHNESLIYIGDSANGPYGPQPIADVRIRAQNIADELVERGVK 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 +L VIACNTA + R + PA+++A A T++ + ++ T T+ Sbjct: 61 ML-VIACNTASAAFLHDARERYDVPVIEVIRPAVRRAIATTRNNRVGVIGTIGTINSGAY 119 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +L + Q I V++ + VE G+ +I +G + D +VL Sbjct: 120 QDL---FSLQPGIE-VTAAACPAFVEFVERGVTSGR-QILGVAQGYLEPLQAAGVDTLVL 174 Query: 198 ACTHYPLIVHVFR 210 CTHYPL+ V + Sbjct: 175 GCTHYPLLSGVIQ 187 >gi|45656923|ref|YP_001009.1| glutamate racemase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|59798336|sp|Q72TI2|MURI_LEPIC RecName: Full=Glutamate racemase gi|45600160|gb|AAS69646.1| glutamate racemase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 256 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 9/223 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL VL+++ E +Y D PYG +D + L+ + L K Sbjct: 7 IGLMDSGMGGLSVLKELLKYDSELEIVYYGDLKNSPYGE-KDASEVLELVRSVCNFLQKE 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ACNTA + LR F S+ G PAIK A +++L+TP T R Sbjct: 66 NVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKVALLATPVTQREE 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L ++ + +S LA V++ D+ +K + + + + + Sbjct: 125 KLQRLKSELKAEELVLSISCPGLAGLVDQGDF------DKAEKYLRPILANLQEQDVENL 178 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-LPRI 237 VL CTHY + + + P + NS +I L +PR+ Sbjct: 179 VLGCTHYVFLKQIILKNFPNVKIYDGNSGTIKHLLNSLQVPRV 221 >gi|123968208|ref|YP_001009066.1| putative aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. AS9601] gi|123198318|gb|ABM69959.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. AS9601] Length = 264 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 19/254 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGG +L + + Y+AD PYGN ++ + + +DK Sbjct: 5 IGIFDSGIGGFTILNSLLKTRKDVKVFYLADTKRIPYGNKNSKEIRLIAKEICTFFVDKN 64 Query: 76 QPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L ++ACNT A +++D L+ P + +V I +I +L+T T Sbjct: 65 LDAL-LVACNTTNACALDILEDNLK--VPCFDLINSVSEI------VDKQIIGVLATQRT 115 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R +Y I++ I S +E+ K+ D++ + K Sbjct: 116 VRSSYYKKAINAKKGNTIIFQQECPEFVSEIEKE----KLNLDKLNSLSDLYLRPLINKN 171 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR--ARCLLPRINTHQTRVFDDHA 249 + ++L C+HYPLI FR+ + +D S ++ ++ + + ++++ +++ Sbjct: 172 IEELILGCSHYPLIYDFFRKKLDSNIKIIDPSVALIKKFNESFAISKTTSYESLFYENVD 231 Query: 250 LFLSGKPDIAMRRL 263 F++ + D ++++ Sbjct: 232 FFVTSEKDKFLKKV 245 >gi|291546372|emb|CBL19480.1| glutamate racemase [Ruminococcus sp. SR1/5] Length = 273 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 21/239 (8%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILDKY 75 +FDSGIGGL V +++ +P +Y D PYG+ + + R + F L + Sbjct: 11 VFDSGIGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSRETVIRYSRQIIHF---LQEQ 67 Query: 76 QPVLSVIACNT--AFTL--IKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130 + V+ACNT AF L +KDEL + LG + A K AA T++ + I+ T Sbjct: 68 KVKAIVVACNTASAFALDAVKDEL-----DIPILGVIEAGAKVAAQETRNKRVGIIGTVG 122 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEG 189 T+ ++ + + + + + VEE D + +E+ ++ E + Sbjct: 123 TVGSGIHASYLKELDPEITVIGKACPLFVPLVEE-----GWYHDPVTEEVARRYLKELQE 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 + D ++L CTHYPL+ R++ V ++ + A + LL R++ V + Sbjct: 178 QEIDTLILGCTHYPLLRSTIRKIMGEEVCLVNPAYETALELKKLLSRLDLSSNEVAQEE 236 >gi|126701188|ref|YP_001090085.1| glutamate racemase [Clostridium difficile 630] gi|254977188|ref|ZP_05273660.1| glutamate racemase [Clostridium difficile QCD-66c26] gi|255094517|ref|ZP_05323995.1| glutamate racemase [Clostridium difficile CIP 107932] gi|255102774|ref|ZP_05331751.1| glutamate racemase [Clostridium difficile QCD-63q42] gi|255308595|ref|ZP_05352766.1| glutamate racemase [Clostridium difficile ATCC 43255] gi|255316269|ref|ZP_05357852.1| glutamate racemase [Clostridium difficile QCD-76w55] gi|255518930|ref|ZP_05386606.1| glutamate racemase [Clostridium difficile QCD-97b34] gi|255652109|ref|ZP_05399011.1| glutamate racemase [Clostridium difficile QCD-37x79] gi|260685082|ref|YP_003216367.1| glutamate racemase [Clostridium difficile CD196] gi|260688740|ref|YP_003219874.1| glutamate racemase [Clostridium difficile R20291] gi|306521843|ref|ZP_07408190.1| glutamate racemase [Clostridium difficile QCD-32g58] gi|115252625|emb|CAJ70468.1| Glutamate racemase [Clostridium difficile] gi|260211245|emb|CBA66775.1| glutamate racemase [Clostridium difficile CD196] gi|260214757|emb|CBE07455.1| glutamate racemase [Clostridium difficile R20291] Length = 268 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 12/246 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++ ++P IY D PYG+ + K F + L Sbjct: 6 IGVFDSGLGGLTVLKEIMKILPNEDIIYFGDTARIPYGSRSKETIIK-YTFQAINFLKTK 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 VIACNTA E + + + +G + A + A + T++ ++ I+ T T+ Sbjct: 65 GVKAIVIACNTATARSLKEAQEKY-DIPIIGVIEAGARTAVSSTKNKIVGIIGTEGTI-S 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + NL S + + I +V+ + VEE ++ + K ++ E + K Sbjct: 123 SKAYNLEISKIDES-IEIVNKACPLFVPIVEEGWANTEVAKLTAKIYLQ----ELKEKNI 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251 D +VL CTHYP++ + + ++ + A+ + +L N + T + + + Sbjct: 178 DSLVLGCTHYPILKRTIGEEVGEHIKLVNPAKETAKDLKKILEVQNIINNTEIHGTYQYY 237 Query: 252 LSGKPD 257 +S P+ Sbjct: 238 VSDIPE 243 >gi|56708260|ref|YP_170156.1| glutamate racemase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670731|ref|YP_667288.1| glutamate racemase [Francisella tularensis subsp. tularensis FSC198] gi|134302177|ref|YP_001122146.1| glutamate racemase [Francisella tularensis subsp. tularensis WY96-3418] gi|224457380|ref|ZP_03665853.1| glutamate racemase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370745|ref|ZP_04986750.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875080|ref|ZP_05247790.1| glutamate racemase [Francisella tularensis subsp. tularensis MA00-2987] gi|56604752|emb|CAG45830.1| glutamate racemase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321064|emb|CAL09213.1| glutamate racemase [Francisella tularensis subsp. tularensis FSC198] gi|134049954|gb|ABO47025.1| glutamate racemase [Francisella tularensis subsp. tularensis WY96-3418] gi|151568988|gb|EDN34642.1| hypothetical protein FTBG_00552 [Francisella tularensis subsp. tularensis FSC033] gi|254841079|gb|EET19515.1| glutamate racemase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159487|gb|ADA78878.1| glutamate racemase [Francisella tularensis subsp. tularensis NE061598] Length = 265 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 15/203 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL +++ + ++P IY D PYG ++K Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQK 53 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 ++D+ + +IACNT + KD ++ ++ + + A + Sbjct: 54 FAAQTAKFLIDQEVKAI-IIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++TPAT+ + IH ++ + S +EE I E + KE Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVE-LVAKEYLS 169 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 F K ++L CTHYP+I Sbjct: 170 YF---HDKNIQALILGCTHYPII 189 >gi|215276268|ref|YP_002332231.1| putative glutamate racemase [Escherichia coli O127:H6 str. E2348/69] gi|312964743|ref|ZP_07778984.1| glutamate racemase [Escherichia coli 2362-75] gi|215267864|emb|CAS07533.1| putative glutamate racemase [Escherichia coli O127:H6 str. E2348/69] gi|312290592|gb|EFR18471.1| glutamate racemase [Escherichia coli 2362-75] Length = 269 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 ++ I + DSG+GGL ++++ L+P IY D+ PYGN + KK L FL Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFLQ 64 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124 S + L +ACNT + ++ E S +FP L + + Q + Sbjct: 65 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 118 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 I++T T++ LI +I S LA +EE ++IKK + Sbjct: 119 IIATEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 + I+L CTHYP++ ++F ++P Sbjct: 179 ---SLHPVNEIILGCTHYPIVQNLFEAVAP 205 >gi|194430317|ref|ZP_03062810.1| glutamate racemase [Escherichia coli B171] gi|194411647|gb|EDX27976.1| glutamate racemase [Escherichia coli B171] Length = 269 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 ++ I + DSG+GGL ++++ L+P IY D+ PYGN + KK L FL Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFLQ 64 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124 S + L +ACNT + ++ E S +FP L + + Q + Sbjct: 65 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 118 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 I++T T++ LI +I S LA +EE ++IKK + Sbjct: 119 IIATEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 + I+L CTHYP++ ++F ++P Sbjct: 179 ---SLHPVNEIILGCTHYPIVQNLFEAVAP 205 >gi|197693730|gb|ACH71534.1| glutamate racemase [Helicobacter pylori] gi|197693732|gb|ACH71535.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQIK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LEILPEVVILGCTHFPLIAH 189 >gi|190014952|ref|YP_001965464.1| Putative glutamate racemase [Escherichia coli] gi|109389673|gb|ABG29592.1| Putative glutamate racemase [Escherichia coli] Length = 273 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 ++ I + DSG+GGL ++++ L+P IY D+ PYGN + KK L FL Sbjct: 9 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFLQ 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124 S + L +ACNT + ++ E S +FP L + + Q + Sbjct: 69 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 122 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 I++T T++ LI +I S LA +EE ++IKK + Sbjct: 123 IIATEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 182 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 + I+L CTHYP++ ++F ++P Sbjct: 183 ---SLHPVNEIILGCTHYPIVQNLFEAVAP 209 >gi|27467761|ref|NP_764398.1| glutamate racemase [Staphylococcus epidermidis ATCC 12228] gi|251810598|ref|ZP_04825071.1| glutamate racemase [Staphylococcus epidermidis BCM-HMP0060] gi|282876402|ref|ZP_06285269.1| glutamate racemase [Staphylococcus epidermidis SK135] gi|293366868|ref|ZP_06613544.1| glutamate racemase [Staphylococcus epidermidis M23864:W2(grey)] gi|29839516|sp|Q8CPL0|MURI_STAES RecName: Full=Glutamate racemase gi|27315305|gb|AAO04440.1|AE016746_230 glutamate racemase [Staphylococcus epidermidis ATCC 12228] gi|251805758|gb|EES58415.1| glutamate racemase [Staphylococcus epidermidis BCM-HMP0060] gi|281295427|gb|EFA87954.1| glutamate racemase [Staphylococcus epidermidis SK135] gi|291319169|gb|EFE59539.1| glutamate racemase [Staphylococcus epidermidis M23864:W2(grey)] gi|329730002|gb|EGG66393.1| glutamate racemase [Staphylococcus epidermidis VCU144] gi|329734459|gb|EGG70772.1| glutamate racemase [Staphylococcus epidermidis VCU045] gi|329736265|gb|EGG72537.1| glutamate racemase [Staphylococcus epidermidis VCU028] Length = 267 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 9/246 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +KK L + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKKFTTELAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L++ P + +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALNYLQNILP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189 T++ I +++ V+ VE+ ++ K+ I I + Sbjct: 119 TIKSEAYRTHIKKINPNVNVYSVACPGFVPLVEQ----MRYKDPTITNIVIHQTLKQWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248 D ++L CTHYPL+ + + + AR LL N H + H Sbjct: 175 SDADTVILGCTHYPLLYQPIYEYFSGTKTVISSGLETAREVSALLTFSNEHASYTEHPQH 234 Query: 249 ALFLSG 254 F +G Sbjct: 235 RFFATG 240 >gi|315640905|ref|ZP_07896001.1| glutamate racemase [Enterococcus italicus DSM 15952] gi|315483323|gb|EFU73823.1| glutamate racemase [Enterococcus italicus DSM 15952] Length = 272 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 7/233 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++ +P + IY+ D PYG + + +L+K + Sbjct: 10 IDSGVGGLTVVKEALKQLPNENIIYLGDTARCPYGPRPAEQVIAFTWEMTRFLLNKNIKM 69 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACNTA + +E++ T S+ +G + P + A T + I ++ T T++ Sbjct: 70 L-VIACNTATAVALEEIKKTL-SIPVIGVILPGSRAAIKATHTNQIGVIGTEGTIKSASY 127 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 ++ + I ++ VE + + + + + + EK+ D ++L Sbjct: 128 ERVLQEKSPKAKILSLACPKFVPIVESNQFQTSVAKKIVAESLR--YFEKQ--PVDTLIL 183 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 CTHYP++ + + + V +D+ LL T + + ++ Sbjct: 184 GCTHYPILRPLIQNVMGSKVKLIDSGAETVGEVSTLLDYFQMANTTLTTERSM 236 >gi|195953669|ref|YP_002121959.1| glutamate racemase [Hydrogenobaculum sp. Y04AAS1] gi|229486240|sp|B4UA20|MURI_HYDS0 RecName: Full=Glutamate racemase gi|195933281|gb|ACG57981.1| glutamate racemase [Hydrogenobaculum sp. Y04AAS1] Length = 259 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 31/223 (13%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG+GGL VL+ +R + + +Y+ D PYG + K+ FL + Sbjct: 3 IGMFDSGVGGLTVLKSVRKVYDKVDIVYLGDTARVPYGIKSKETIITYAKESANFLINQN 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130 +D + +IACN+ + L+ F + +G + A ++ A +++ + I+ T A Sbjct: 63 VD-----VILIACNSVSANAMEALQEMF-DIPIVGVIEAGVEAALKSSKTKHVGIIGTSA 116 Query: 131 TLRRT-YTSNL----IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 T+ Y L I +Y C + +V ++ + + + A +KE Sbjct: 117 TINSNKYQERLEAFNIKTYAKACPLFVPIVEEKLINTDISKKAVEFYLKE---------- 166 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 K+ K D ++L CTHYPL+ + P ++ + +SD+I Sbjct: 167 --FKDLKDIDTLILGCTHYPLLEEDIKAFLPH-INLVSSSDAI 206 >gi|309388889|gb|ADO76769.1| glutamate racemase [Halanaerobium praevalens DSM 2228] Length = 277 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 6/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I + DSG+GGL V ++ +P + +Y D + PYG ++ + + + ++ Sbjct: 6 KKAIGLLDSGVGGLTVAFEIFKFLPRENIVYFGDTLHLPYGPKSLSVVRTYVEKIINYLI 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + +IACNTA + D ++ F F A +A T+ I+++ T T+ Sbjct: 66 EEKKVKAIIIACNTATSAALDYVKDKFEVPIFGMIKRAAFKAVTLTKKKKIAVIGTEGTI 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I S ++ ++ + I V GI K E++K + + Sbjct: 126 KSQVYQQAILSRNTEIEVY---TRICPEFVTLVEAGI-FKGPEVRKIADFYLKPLKNYGV 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHAL 250 D ++LACTH+P + + L V ++ + + + L +N ++ F H L Sbjct: 182 DTLILACTHFPYLTPIIADLMGAKVKLVNPASELVAELQNTLSNLNLLNSQNDNFTQHQL 241 Query: 251 FLSGKPDIAMRRLMQG 266 +S K I+ + L G Sbjct: 242 LVSKKQKISTKFLQNG 257 >gi|229149186|ref|ZP_04277427.1| Glutamate racemase [Bacillus cereus m1550] gi|228634385|gb|EEK90973.1| Glutamate racemase [Bacillus cereus m1550] Length = 276 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAAALNALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLEVHSYACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ + + +++ A +L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|208779829|ref|ZP_03247173.1| glutamate racemase [Francisella novicida FTG] gi|254373122|ref|ZP_04988611.1| glutamate racemase [Francisella tularensis subsp. novicida GA99-3549] gi|151570849|gb|EDN36503.1| glutamate racemase [Francisella novicida GA99-3549] gi|208744284|gb|EDZ90584.1| glutamate racemase [Francisella novicida FTG] Length = 265 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL +++ + ++P IY D PYG + A + Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGT-KSRATIQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + L + + +IACNT + KD ++ ++ + + A + Sbjct: 53 KFAAQTAKFLIEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++TPAT+ + IH ++ + S +EE +I E + KE Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVE-LVAKEYLS 169 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 F K ++L CTHYP+I Sbjct: 170 YF---HDKNIQALILGCTHYPII 189 >gi|123965917|ref|YP_001010998.1| putative aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. MIT 9515] gi|123200283|gb|ABM71891.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. MIT 9515] Length = 264 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 15/246 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGG +L + + Y+AD PYG+ + ++ + + DK Sbjct: 5 IGIFDSGIGGFTILDYLLKTRKDLEIFYLADTKRVPYGDKDFEQIRIIAKEICNWFEDKN 64 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 L ++ACNT D L + P + +V I I +L+TPAT++ Sbjct: 65 LDAL-LVACNTTNACALDILENHLGIPVFDLINSVSEI------VSKKCIGVLATPATIK 117 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +Y +I S + + S +E+ K+ +++ + K + Sbjct: 118 TSYYKKIIESKGENIKVFQQACPEFVSEIEK----TKLNLNKLNYLSDSYLNPLFKKNIE 173 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR--ARCLLPRINTHQTRVFDDHALF 251 I+L CTHYPLI +V P + +D S ++ + L+P+ + + + ++ F Sbjct: 174 EIILGCTHYPLIFNVLENKIPSNIKIIDPSVALVNKFNNSFLIPKNDCNNSISQENVKFF 233 Query: 252 LSGKPD 257 ++ K + Sbjct: 234 VTSKSE 239 >gi|15673264|ref|NP_267438.1| glutamate racemase [Lactococcus lactis subsp. lactis Il1403] gi|13878595|sp|Q9CG28|MURI_LACLA RecName: Full=Glutamate racemase gi|12724258|gb|AAK05380.1|AE006360_9 glutamate racemase [Lactococcus lactis subsp. lactis Il1403] Length = 271 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 22/236 (9%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V +++ +P +Y+ D PYG + Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + + +L K ++ V+ACNT A ++K++L + GA AI++ T Sbjct: 53 FTWDMVNFLLSKDVKMI-VMACNTATAMALEIVKEKLDIPVIGVILPGASSAIQK----T 107 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ I +++T A++R I S ++ ++ S VE E EI + Sbjct: 108 KTNKIGVIATQASIRSDEYHKTIARKSSAVEVYSLACPKFVSIVESNEM-----ESEIAR 162 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++ + + D ++L CTHYPL+ + ++ V +D+ R LL Sbjct: 163 KVVSESLVPLIGKVDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLL 218 >gi|151567723|pdb|2JFQ|A Chain A, Crystal Structure Of Staphylococcus Aureus Glutamate Racemase In Complex With D-Glutamate gi|151567724|pdb|2JFQ|B Chain B, Crystal Structure Of Staphylococcus Aureus Glutamate Racemase In Complex With D-Glutamate Length = 286 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 9/251 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + I + DSG+GGL V +++ +P Y+ D PYG +K+ + Sbjct: 16 PRGSHMNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVE 75 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 + +++ + + VIACNTA + + L+ T S++ +G + P + A T++ + + Sbjct: 76 IARKLME-FDIKMLVIACNTATAVALEYLQKTL-SISVIGVIEPGARTAIMTTRNQNVLV 133 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L T T++ I +H V+ VE+ ++ + I + + Sbjct: 134 LGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQ----MRYSDPTITSIVIHQTL 189 Query: 186 EK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 ++ +D ++L CTHYPL+ + + AR LL N H + Sbjct: 190 KRWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYT 249 Query: 245 -FDDHALFLSG 254 DH F +G Sbjct: 250 EHPDHRFFATG 260 >gi|52786718|ref|YP_092547.1| glutamate racemase [Bacillus licheniformis ATCC 14580] gi|319647248|ref|ZP_08001470.1| RacE protein [Bacillus sp. BT1B_CT2] gi|52349220|gb|AAU41854.1| RacE [Bacillus licheniformis ATCC 14580] gi|317390595|gb|EFV71400.1| RacE protein [Bacillus sp. BT1B_CT2] Length = 272 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 6/224 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L I + DSG+GGL V +++ +P+ IY+ D PYG + + + + + Sbjct: 2 LDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYLGDTKRCPYGPRDRKEVLSYTWEMTNYL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L ++ + VIACNTA + +E+ S ++ +G V P + A T++ I ++ T Sbjct: 62 LSRHHIKMLVIACNTATAIALEEI-SREVAIPVIGVVQPGARTAIKVTENQRIGVIGTEN 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + ++ + VE K ++ + + Sbjct: 121 TIKSGAYEEALLSLNGDLTVENLACPMFVPFVESG----KFLDETADEIVRTSLHPLRDS 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYP++ ++ V+ + + D AR +L Sbjct: 177 SIDTLILGCTHYPILKEPIQRYMGERVNIISSGDETAREVSTIL 220 >gi|197693674|gb|ACH71506.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVE-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LKILPEVVILGCTHFPLIAH 189 >gi|206968268|ref|ZP_03229224.1| glutamate racemase [Bacillus cereus AH1134] gi|206737188|gb|EDZ54335.1| glutamate racemase [Bacillus cereus AH1134] Length = 276 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAAALNALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLEVHSYACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ + + +++ A +L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|255657512|ref|ZP_05402921.1| glutamate racemase [Clostridium difficile QCD-23m63] gi|296452816|ref|ZP_06894503.1| glutamate racemase [Clostridium difficile NAP08] gi|296879932|ref|ZP_06903904.1| glutamate racemase [Clostridium difficile NAP07] gi|296258364|gb|EFH05272.1| glutamate racemase [Clostridium difficile NAP08] gi|296429046|gb|EFH14921.1| glutamate racemase [Clostridium difficile NAP07] Length = 268 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 12/246 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++ ++P IY D PYG+ + K F + L Sbjct: 6 IGVFDSGLGGLTVLKEIMKILPNEDIIYFGDTARIPYGSRSKETIIK-YTFQAINFLKTK 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 VIACNTA E + + + +G + A + A + T++ ++ I+ T T+ Sbjct: 65 GVKAIVIACNTATARSLKEAQEKY-DIPIIGVIEAGARTAVSSTKNKIVGIIGTEGTI-S 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + NL S + + I +V+ + VEE ++ + K ++ E + K Sbjct: 123 SKAYNLEISKIDES-IEIVNKACPLFVPIVEEGWANTEVAKLTAKIYLQ----ELKEKNI 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251 D +VL CTHYP++ + + ++ + A+ + +L N + T + + + Sbjct: 178 DSLVLGCTHYPILKRTIGEEVGEHIKLVNPAKETAKDLKKVLEVKNIINNTEIHGTYQYY 237 Query: 252 LSGKPD 257 +S P+ Sbjct: 238 VSDIPE 243 >gi|317177617|dbj|BAJ55406.1| glutamate racemase [Helicobacter pylori F16] Length = 255 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHV-------FRQLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H + LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEYFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|118497764|ref|YP_898814.1| glutamate racemase [Francisella tularensis subsp. novicida U112] gi|194323736|ref|ZP_03057512.1| glutamate racemase [Francisella tularensis subsp. novicida FTE] gi|118423670|gb|ABK90060.1| glutamate racemase [Francisella novicida U112] gi|194322100|gb|EDX19582.1| glutamate racemase [Francisella tularensis subsp. novicida FTE] Length = 265 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL +++ + ++P IY D PYG + A + Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGT-KSRATIQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + L + + +IACNT + KD ++ ++ + + A + Sbjct: 53 KFAAQTAKFLIEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++TPAT+ + IH ++ + S +EE +I E + KE Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVE-LVAKEYLS 169 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 F K ++L CTHYP+I Sbjct: 170 YF---HDKNIQALILGCTHYPII 189 >gi|255020717|ref|ZP_05292777.1| Glutamate racemase [Acidithiobacillus caldus ATCC 51756] gi|254969833|gb|EET27335.1| Glutamate racemase [Acidithiobacillus caldus ATCC 51756] Length = 274 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 22/222 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL L +P + + D PYG+ + +++ + L Sbjct: 3 IGVFDSGLGGLSTLLACLRYLPSAEYRFFGDVAHAPYGDKDPQVVRRWTAEAYERFLAAG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA + LR P + LG PAIK+A +SG I +L+T T+R Sbjct: 63 VDAV-VLACNTATSAAAAPLREQSP-VPILGLEPAIKKALD-VESGPILLLATTLTVRGD 119 Query: 136 YTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-IEGCFIEKEGKRTD 193 L+ +Q + V+ L VE + + + +E + F+E R Sbjct: 120 KLRALLQRMDGAQQRVRAVACPGLMEIVEAQTTDWRAQAESYWRERLLPHFVE---LRPK 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWL-------DNSDSIAR 228 +VL CTHY + FR DW+ D +D +AR Sbjct: 177 GLVLGCTHYCWLEDAFR-------DWVGPGCRVYDGNDGLAR 211 >gi|282856714|ref|ZP_06265980.1| glutamate racemase [Pyramidobacter piscolens W5455] gi|282585479|gb|EFB90781.1| glutamate racemase [Pyramidobacter piscolens W5455] Length = 267 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 14/201 (6%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWED----HALKKRLMFLFSDILD 73 +FDSG+GG V+++++ ++P +Y D PYGN H ++ L F L+ Sbjct: 9 VFDSGVGGFSVVKEIQKVLPGEDVLYYGDSANMPYGNRSGEEILHLTRQILAF-----LE 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + +ACNT +LI D R +P F + A + A + + ++ T T R Sbjct: 64 RRGVKAAAVACNTISSLI-DRYRDDYPFKIF-SVIEAGAASVATLDADCVGVIGTVFTAR 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 LI++ + ++ LA ++ + + E++ +E + + Sbjct: 122 SGAYHRLINAVRPEMKVYAQGCPNLARLIDGGDLRPESIDPELRAAVEPLLAQAPIRH-- 179 Query: 194 VIVLACTHYPLIVHVFRQLSP 214 ++L CTHYPL+ +L P Sbjct: 180 -LILGCTHYPLVSGYLNRLYP 199 >gi|317180321|dbj|BAJ58107.1| glutamate racemase [Helicobacter pylori F32] Length = 255 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALGEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT+R N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYLMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|322417854|ref|YP_004197077.1| glutamate racemase [Geobacter sp. M18] gi|320124241|gb|ADW11801.1| glutamate racemase [Geobacter sp. M18] Length = 279 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 10/222 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L++ Sbjct: 5 AIGIFDSGVGGLTVLKEVVQALPQEDTIYLGDTARVPYGTKSPETVIRYSRQIARYLLNR 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 +L V+ACNTA + L+ F + +G + P + AAA T++G + ++ T AT+ Sbjct: 65 DIKLL-VVACNTASAVALSALQQEF-DIPIVGVIEPGARAAAAATRTGRVGVIGTAATVA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRT 192 + + I + + + EE ++++ + ++E + + Sbjct: 123 SSAYTKAIKRINPDIEVVNRACPLFVPLAEEGWV-----DNDVARMTARLYLEDLKQQGV 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233 D +VL CTHYP++ V Q+ V +D++ AR AR L Sbjct: 178 DTLVLGCTHYPILKEVIAQVMGPEVTLVDSAAETARTVARIL 219 >gi|225549352|ref|ZP_03770325.1| glutamate racemase [Borrelia burgdorferi 94a] gi|225370210|gb|EEG99650.1| glutamate racemase [Borrelia burgdorferi 94a] Length = 305 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 17/202 (8%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTS---NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +++T TL + N+ + + + LV+ + ++YA + + Sbjct: 156 LLIATNTTLESKFVKDQVNIHNDLIVKAAGELVNFVEYGENYKKYAL----------RCL 205 Query: 181 EGCFIEKEGKRTDVIVLACTHY 202 E E +++ L CTHY Sbjct: 206 EALKFEVVNTGREIVFLGCTHY 227 >gi|197693548|gb|ACH71443.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 +VI+L CTH+PLI RQ+ + Sbjct: 173 LPEVIILGCTHFPLIA---RQIESY 194 >gi|218249889|ref|YP_002374628.1| glutamate racemase [Borrelia burgdorferi ZS7] gi|226321989|ref|ZP_03797514.1| glutamate racemase [Borrelia burgdorferi Bol26] gi|218165077|gb|ACK75138.1| glutamate racemase [Borrelia burgdorferi ZS7] gi|226232579|gb|EEH31333.1| glutamate racemase [Borrelia burgdorferi Bol26] Length = 305 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 17/202 (8%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTS---NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +++T TL + N+ + + + LV+ + ++YA + + Sbjct: 156 LLIATNTTLESKFVKDQVNIHNDLIVKAAGELVNFVEYGENYKKYAL----------RCL 205 Query: 181 EGCFIEKEGKRTDVIVLACTHY 202 E E +++ L CTHY Sbjct: 206 EALKFEVVNTGREIVFLGCTHY 227 >gi|296129171|ref|YP_003636421.1| glutamate racemase [Cellulomonas flavigena DSM 20109] gi|296020986|gb|ADG74222.1| glutamate racemase [Cellulomonas flavigena DSM 20109] Length = 285 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 23/223 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+ D + PYG A++ + + D++D Sbjct: 21 IGIFDSGVGGLTVARAVLDQLPHESTLYIGDTLNGPYGPKPLAAVRAHALEIMDDLVDAG 80 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L VIACN+A + + R + L V PA ++A A T++G I ++ T AT Sbjct: 81 VKML-VIACNSASAAVLRDARERYTVRRGLPVVEVVLPAARRAVAATRNGRIGVIGTRAT 139 Query: 132 LR-RTYTSNLIHSYVSQCHIHLVSSMILASR-----VEEYACGIKIKEDEIKKEIEGCFI 185 + R Y V+ + L SR VE G+ D + E Sbjct: 140 VESRAYDDAFA-----------VAGVDLTSRACPRFVELVEAGVTSGPDALATAHEYLDP 188 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++ D +VL CTHYPL+ V + V + +++ A+ Sbjct: 189 VRQAG-VDTLVLGCTHYPLLTGVISYVMGDQVTLVSSAEETAK 230 >gi|312149583|gb|ADQ29654.1| glutamate racemase [Borrelia burgdorferi N40] Length = 261 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 21/198 (10%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL Sbjct: 2 KNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLIE 61 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + Y V+ACNT + ++L FP + L V ++ + +++T Sbjct: 62 KLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIATN 117 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184 TL + + Q +IH + +I+ + E EY G K+D + +E Sbjct: 118 TTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDAFRC-LEALK 165 Query: 185 IEKEGKRTDVIVLACTHY 202 E +++ L CTHY Sbjct: 166 FEVVNTGREIVFLGCTHY 183 >gi|170077204|ref|YP_001733842.1| glutamate racemase [Synechococcus sp. PCC 7002] gi|229486281|sp|B1XPV8|MURI_SYNP2 RecName: Full=Glutamate racemase gi|169884873|gb|ACA98586.1| glutamate racemase [Synechococcus sp. PCC 7002] Length = 279 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 7/217 (3%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + Q+ I IFDSG+GG+ VL+ + +P+ IY AD PYG+ L + + + + Sbjct: 3 NQQQHPIGIFDSGLGGITVLRALYRQLPQESIIYFADTARLPYGDRSPEELIQYVREILT 62 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++ + V+ACNT+ + D +RS F + +P + A +Q I +++T Sbjct: 63 -WMEAQGVKMVVMACNTSSAIALDVIRSEFKTPVLGLILPGAR--GAVSQGKRIGVIATQ 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ N I + + + +E +I + K+ ++ Sbjct: 120 ATVNSGAYENAILEANPEAAVWQMPCPEFVPLIEAN----RINDPHTKRIVQKRLQPLLE 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 + D +V CTHY + V + + P V +D ++ + Sbjct: 176 QGIDTLVYGCTHYRHLSGVIQSILPSHVICVDPAEYV 212 >gi|260587549|ref|ZP_05853462.1| glutamate racemase [Blautia hansenii DSM 20583] gi|331084204|ref|ZP_08333310.1| glutamate racemase [Lachnospiraceae bacterium 6_1_63FAA] gi|260541814|gb|EEX22383.1| glutamate racemase [Blautia hansenii DSM 20583] gi|330402059|gb|EGG81632.1| glutamate racemase [Lachnospiraceae bacterium 6_1_63FAA] Length = 273 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 11/222 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILD 73 I +FDSG+GGL V +++ +P +Y D PYG+ + + R + F L Sbjct: 9 IGVFDSGVGGLTVAREIMRNLPHEKIVYFGDTARVPYGSKSKETILRYSRQIVRF---LQ 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + V+ACNTA L + + + +G V P K AA T++ I ++ T AT+ Sbjct: 66 TQEVKAIVVACNTASALALETISEEI-DIPIIGVVKPGAKVAAQTTRNKKIGLIGTRATV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I + + + + VEE + E+ K +EK+ Sbjct: 125 KSDLYRKTIQAENPEIEVIGQPCPLFVPLVEEGWLKDSVT-IEVAKRYLAPLLEKD---I 180 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYPL+ + L V ++ + A+ + LL Sbjct: 181 DTLILGCTHYPLLRSTLKTLVGDGVTLVNPAYETAKELQRLL 222 >gi|86149468|ref|ZP_01067699.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596590|ref|ZP_01099827.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 84-25] gi|218563241|ref|YP_002345021.1| glutamate racemase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11386947|sp|Q9PM24|MURI_CAMJE RecName: Full=Glutamate racemase gi|85840250|gb|EAQ57508.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191431|gb|EAQ95403.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 84-25] gi|112360948|emb|CAL35749.1| glutamate racemase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926846|gb|ADC29198.1| glutamate racemase [Campylobacter jejuni subsp. jejuni IA3902] gi|315927597|gb|EFV06928.1| glutamate racemase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929474|gb|EFV08670.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 305] Length = 250 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 15/206 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + D +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-DFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++ Sbjct: 62 QIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121 Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y L+ +I+ +++ + VEE GI + D ++ +E F K Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218 D ++LACTH+PL+ R LS + D Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196 >gi|315607047|ref|ZP_07882051.1| glutamate racemase [Prevotella buccae ATCC 33574] gi|315251101|gb|EFU31086.1| glutamate racemase [Prevotella buccae ATCC 33574] Length = 278 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 13/231 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + F ++ Sbjct: 8 GPIGIFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGT---RSFDVVYQFTRQAVIK 64 Query: 74 KYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 ++ L ++ CNTA ++ ++ P LG + P + T++ + + Sbjct: 65 LFEMGCHLVILGCNTASAKALRSIQHRDIPELDPGRRVLGVIRPTAEVIGELTRNNHVGL 124 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 +T T+R + I + V+ VE + +KK ++ + Sbjct: 125 FATEGTVRSCSYNLEIGKLWPDIKVTGVACPFWVPLVEYNEADSPGADYFVKKRVDE--L 182 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++ D I+L CTHYPL++ + P V + + +A + R Sbjct: 183 MRKDPEIDTIILGCTHYPLLMPKILKYVPPGVRIIPQGEYVADSLKAYFER 233 >gi|148925791|ref|ZP_01809479.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845801|gb|EDK22892.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8486] Length = 247 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 15/206 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + D +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-DFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++ Sbjct: 62 QIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121 Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y L+ +I+ +++ + VEE GI + D ++ +E F K Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218 D ++LACTH+PL+ R LS + D Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196 >gi|228984040|ref|ZP_04144229.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775720|gb|EEM24097.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 284 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 76 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 77 PLKALVVACNTAAAAALAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 135 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 136 NMYEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTEEDI 189 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 190 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 249 Query: 253 SG 254 +G Sbjct: 250 TG 251 >gi|33862666|ref|NP_894226.1| putative aspartate and glutamate racemase:glutamate racemase [Prochlorococcus marinus str. MIT 9313] gi|33634582|emb|CAE20568.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. MIT 9313] Length = 268 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 20/223 (8%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+++ + +Y+ D PYGN H ++ + + D+ Q Sbjct: 7 LFDSGVGGLTVLRRVLERHGQVPCLYLGDTARVPYGNRMPHEIRVIAKEVVQWLRDQ-QV 65 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA---IKQAAAYTQSGLISILSTPATLRR 134 V+ACNT L D + A G +P I+ AA + +L+T Sbjct: 66 TAVVMACNTTNALASDV------AEAVAGRIPVVRLIEAAANMLSEERVGVLAT------ 113 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIEKEGKR 191 + +Y Q I +M++ + I ++ +E+ + + Sbjct: 114 -PAAAASGAYGKQIEISRPGTMVIEQGCPAFVPLIETGQLSSEELYQAAREYLNPLLAAQ 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + +VL CTHYPL+ + RQ+ P V +D + +AR LL Sbjct: 173 VEAVVLGCTHYPLLEPILRQILPQDVRLIDPAIGVARELDVLL 215 >gi|229095486|ref|ZP_04226477.1| Glutamate racemase [Bacillus cereus Rock3-29] gi|228688032|gb|EEL41919.1| Glutamate racemase [Bacillus cereus Rock3-29] Length = 275 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|262201908|ref|YP_003273116.1| glutamate racemase [Gordonia bronchialis DSM 43247] gi|262085255|gb|ACY21223.1| glutamate racemase [Gordonia bronchialis DSM 43247] Length = 254 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 13/244 (5%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL V + + L+P+ +Y+ D PYG +++ + + D+ + + VI Sbjct: 1 MGGLTVARAIIDLLPDEDIVYIGDTANGPYGPLTIPEIRRHALAIGDDLAARGVKAI-VI 59 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL-RRTYTSNL 140 ACNTA + R + + + V PA+++A T++G I ++ T AT+ R Y + Sbjct: 60 ACNTASAACLRDARERYAPIPVVEVVLPAVRRAVVATKTGRIGVIGTEATIASRAYQDSF 119 Query: 141 IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + +++++ V+ GI +I +G + D +VL CT Sbjct: 120 -----AAARDAVITAVACPRFVDFVERGITSGR-QILGLAQGYLEPLQEAGVDTVVLGCT 173 Query: 201 HYPLIVHVFRQLSPWPVDWLDNSDSIAR---RARCLLPRINTHQTRVFDDHALFLSGKPD 257 HYPL+ V + V + +++ A+ R +++H RV D +G P+ Sbjct: 174 HYPLLSGVIQLAMGDEVTLVSSAEETAKDLFRVLTEADLLHSHSDRVA-DRVFQATGDPE 232 Query: 258 IAMR 261 R Sbjct: 233 FFAR 236 >gi|254758420|ref|ZP_05210447.1| glutamate racemase [Bacillus anthracis str. Australia 94] Length = 276 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSAILQHKGILADNLNPKHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|227432402|ref|ZP_03914392.1| glutamate racemase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351841|gb|EEJ42077.1| glutamate racemase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 291 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 7/238 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSGIGGL V+++ + +P IY+ D PYG + + + ++ Sbjct: 17 NNPIGLVDSGIGGLTVVKESQKQLPNEQLIYIGDTARMPYGPRSEKEVIDYTFQMTHYLV 76 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA +LR + +G + P + A + +Q+ I +++T T Sbjct: 77 NEQNIKMLVIACNTATARALSQLREQL-CIPVIGVIQPGAEAAVSISQNKKIGLIATQGT 135 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + + I + + VE + DE ++ I + Sbjct: 136 VESQVYNEKMLAIDNNVQITSQAEPEFVTLVENNLY----QSDEAREVIAHHLSAFKEAN 191 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTH+PL+ ++ V +D+ + L ++ H + V +H+ Sbjct: 192 IDTLILGCTHFPLLTPFIQEAVGSDVTLVDSGAKTVAVMKQYLDELDIH-SEVKHNHS 248 >gi|116617725|ref|YP_818096.1| glutamate racemase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096572|gb|ABJ61723.1| glutamate racemase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 291 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 7/238 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSGIGGL V+++ + +P IY+ D PYG + + + ++ Sbjct: 17 NNPIGLVDSGIGGLTVVKESQKQLPNEQLIYIGDTARMPYGPRSEKEVIDYTFQMAHYLV 76 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA +LR + +G + P + A + +Q+ I +++T T Sbjct: 77 NEQNIKMLVIACNTATARALSQLREQL-CIPVIGVIQPGAEAAVSISQNKKIGLIATQGT 135 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + + I + + VE + DE ++ I + Sbjct: 136 VESQVYNEKMLAIDNNVQITSQAEPEFVTLVENNLY----QSDEAREVIAHHLSAFKEAN 191 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTH+PL+ ++ V +D+ + L ++ H + V +H+ Sbjct: 192 IDTLILGCTHFPLLTPFIQEAVGSDVTLVDSGAKTVAVMKQYLDELDIH-SEVKHNHS 248 >gi|229177385|ref|ZP_04304768.1| Glutamate racemase [Bacillus cereus 172560W] gi|228606108|gb|EEK63546.1| Glutamate racemase [Bacillus cereus 172560W] Length = 284 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 76 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 77 PLKALVVACNTAAAAALNALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 135 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 136 NMYEKALHELDTYLEVHSYACPTLATVVENQL------EDTAYVTQQVKQALLPLMKEDI 189 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ + + +++ A +L + H F Sbjct: 190 DTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 249 Query: 253 SG 254 +G Sbjct: 250 TG 251 >gi|229195184|ref|ZP_04321959.1| Glutamate racemase [Bacillus cereus m1293] gi|228588413|gb|EEK46456.1| Glutamate racemase [Bacillus cereus m1293] Length = 284 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 76 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 77 PLKALVVACNTAAAAALAALQEAL-SVPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 135 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 136 NMYEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTEEDI 189 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 190 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 249 Query: 253 SG 254 +G Sbjct: 250 TG 251 >gi|300362243|ref|ZP_07058419.1| glutamate racemase [Lactobacillus gasseri JV-V03] gi|300353234|gb|EFJ69106.1| glutamate racemase [Lactobacillus gasseri JV-V03] Length = 283 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 38/246 (15%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ K+ Sbjct: 18 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRS----KE 65 Query: 63 RLMFLFSD----ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117 ++ L D +L K ++ + CNTA + ++ P + +G V + AAA Sbjct: 66 EIISLTRDSVNFLLSKDVKII-IFGCNTATAVAMSTIQKEVP-LQIIGVVQSGALAAART 123 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE 175 T++ ++++ T AT+ HSY+ + V +V E+A + E++ Sbjct: 124 TETKNVAVIGTKATVNS-------HSYLKE-----VQYRDPEIQVSEFAQPKLAPLAEED 171 Query: 176 IKKEIEGCFIEKE-----GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 +EI+ + + D +VL CTHYPL+ + +D +D +A+ Sbjct: 172 PAEEIKQAVVSESLAPLRNINYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYT 231 Query: 231 RCLLPR 236 +L R Sbjct: 232 YNVLRR 237 >gi|288926935|ref|ZP_06420833.1| glutamate racemase [Prevotella buccae D17] gi|288336294|gb|EFC74677.1| glutamate racemase [Prevotella buccae D17] Length = 280 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 13/231 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + F ++ Sbjct: 10 GPIGIFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGT---RSFDVVYQFTRQAVIK 66 Query: 74 KYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 ++ L ++ CNTA ++ ++ P LG + P + T++ + + Sbjct: 67 LFEMGCHLVILGCNTASAKALRSIQHRDIPELDPDRRVLGVIRPTAEVIGELTRNNHVGL 126 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 +T T+R + I + V+ VE + +KK ++ + Sbjct: 127 FATEGTVRSCSYNLEIGKLWPDIKVTGVACPFWVPLVEYNEADSPGADYFVKKRVDE--L 184 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++ D I+L CTHYPL++ + P V + + +A + R Sbjct: 185 MRKDPEIDTIILGCTHYPLLMPKILKYVPPGVRIIPQGEYVADSLKAYFER 235 >gi|157363388|ref|YP_001470155.1| glutamate racemase [Thermotoga lettingae TMO] gi|157313992|gb|ABV33091.1| glutamate racemase [Thermotoga lettingae TMO] Length = 278 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGG VLQK+ MP ++YVAD + PYG + +R+ + + + + Sbjct: 3 IGVFDSGIGGFTVLQKLVEYMPHNEYVYVADTLYAPYGTKTHQQIFERVTRIINFLALQG 62 Query: 76 QPVLSVIACNTAFTLIK-DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V ACNTA ++K L + P + G + ++ + I + +T T++ Sbjct: 63 ADCI-VAACNTADAVLKLSSLSARIP--PYFGILDF---DINFSSAQCIGVAATELTIKS 116 Query: 135 -TYTSNLIHSYVS---QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 Y L++ +S Q + +I + V I+IKE CF + K Sbjct: 117 GIYEKLLLNRGISKIIQRPCQKLVELIENNEVHGRQADIEIKE---------CF--EPFK 165 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D+++L CTH PL++ + + P + + D ++S+ + Sbjct: 166 NADLVILGCTHLPLLIEKIQTIFP-KLRFYDPAESLVKN 203 >gi|225010450|ref|ZP_03700921.1| Glutamate racemase [Flavobacteria bacterium MS024-3C] gi|225005279|gb|EEG43230.1| Glutamate racemase [Flavobacteria bacterium MS024-3C] Length = 138 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/130 (37%), Positives = 62/130 (47%), Gaps = 6/130 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG V + L+P IYVAD PYG + L +D L Sbjct: 8 IGFFDSGVGGTSVWSAVNNLLPNESTIYVADSANAPYGERSAETILA-LSIKNTDFLISK 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA T LR + + F+G PAIK AA T +G + +L+T TL Sbjct: 67 GCKLIVVACNTATTNAIAVLREKY-IIPFIGIEPAIKPAALQTLTGKVGLLATKGTLG-- 123 Query: 136 YTSNLIHSYV 145 S L H V Sbjct: 124 --SALFHKTV 131 >gi|47564795|ref|ZP_00235839.1| glutamate racemase [Bacillus cereus G9241] gi|47558168|gb|EAL16492.1| glutamate racemase [Bacillus cereus G9241] Length = 276 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG A + +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGP-RSVAEVQSFVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAVALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|239985839|ref|ZP_04706503.1| putative glutamate racemase [Streptomyces roseosporus NRRL 11379] Length = 261 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 81/196 (41%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G L + + + Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDLTALALDVARAAAAQ- 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P +IACNTA +R+ P++ +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIIACNTASVHALPAIRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE E I + + Sbjct: 120 PYQRGLIAEFGGSAEVTEVPCPGLADAVEHG------DEAGIDRTVAAAAALTP-PDVRA 172 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 173 VVLGCTHYELVATRIR 188 >gi|30260986|ref|NP_843363.1| glutamate racemase [Bacillus anthracis str. Ames] gi|47526136|ref|YP_017485.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor'] gi|49183830|ref|YP_027082.1| glutamate racemase [Bacillus anthracis str. Sterne] gi|65318262|ref|ZP_00391221.1| COG0796: Glutamate racemase [Bacillus anthracis str. A2012] gi|165871919|ref|ZP_02216561.1| glutamate racemase [Bacillus anthracis str. A0488] gi|167635884|ref|ZP_02394192.1| glutamate racemase [Bacillus anthracis str. A0442] gi|167638901|ref|ZP_02397175.1| glutamate racemase [Bacillus anthracis str. A0193] gi|170687688|ref|ZP_02878904.1| glutamate racemase [Bacillus anthracis str. A0465] gi|170708261|ref|ZP_02898706.1| glutamate racemase [Bacillus anthracis str. A0389] gi|177653883|ref|ZP_02935955.1| glutamate racemase [Bacillus anthracis str. A0174] gi|190566741|ref|ZP_03019658.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I] gi|227816283|ref|YP_002816292.1| glutamate racemase [Bacillus anthracis str. CDC 684] gi|229604796|ref|YP_002865427.1| glutamate racemase [Bacillus anthracis str. A0248] gi|254682956|ref|ZP_05146817.1| glutamate racemase [Bacillus anthracis str. CNEVA-9066] gi|254734368|ref|ZP_05192081.1| glutamate racemase [Bacillus anthracis str. Western North America USA6153] gi|254739982|ref|ZP_05197674.1| glutamate racemase [Bacillus anthracis str. Kruger B] gi|254753322|ref|ZP_05205358.1| glutamate racemase [Bacillus anthracis str. Vollum] gi|150261200|pdb|2DWU|A Chain A, Crystal Structure Of Glutamate Racemase Isoform Race1 From Bacillus Anthracis gi|150261201|pdb|2DWU|B Chain B, Crystal Structure Of Glutamate Racemase Isoform Race1 From Bacillus Anthracis gi|150261202|pdb|2DWU|C Chain C, Crystal Structure Of Glutamate Racemase Isoform Race1 From Bacillus Anthracis gi|30254435|gb|AAP24849.1| glutamate racemase [Bacillus anthracis str. Ames] gi|47501284|gb|AAT29960.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor'] gi|49177757|gb|AAT53133.1| glutamate racemase [Bacillus anthracis str. Sterne] gi|164712350|gb|EDR17885.1| glutamate racemase [Bacillus anthracis str. A0488] gi|167513031|gb|EDR88403.1| glutamate racemase [Bacillus anthracis str. A0193] gi|167528701|gb|EDR91460.1| glutamate racemase [Bacillus anthracis str. A0442] gi|170126782|gb|EDS95664.1| glutamate racemase [Bacillus anthracis str. A0389] gi|170668501|gb|EDT19248.1| glutamate racemase [Bacillus anthracis str. A0465] gi|172081111|gb|EDT66188.1| glutamate racemase [Bacillus anthracis str. A0174] gi|190562293|gb|EDV16261.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I] gi|227007254|gb|ACP16997.1| glutamate racemase [Bacillus anthracis str. CDC 684] gi|229269204|gb|ACQ50841.1| glutamate racemase [Bacillus anthracis str. A0248] Length = 276 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|73662954|ref|YP_301735.1| glutamate racemase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642328|sp|Q49WR7|MURI_STAS1 RecName: Full=Glutamate racemase gi|72495469|dbj|BAE18790.1| glutamate racemase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 269 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 113/263 (42%), Gaps = 9/263 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P Y+ D PYG+ E +++ L + Sbjct: 1 MEKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIERCPYGSREGSEVRQFTTELAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + + + VIACNTA + + L++ P + +G + P + A T++ + IL T Sbjct: 61 M-TFDIKMLVIACNTATAVALNHLQNILP-IPVIGVIEPGARTAIMTTKNNDVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189 T++ + I + + ++ A VE+ ++ K+ I I ++ Sbjct: 119 TIKSEAYRHHIKAINPNVEVTGIACPSFAPMVEQ----MRYKDPIITSIIIHQNLKHWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248 D ++L CTHYPL+ + + AR LL N H + H Sbjct: 175 SNADTVILGCTHYPLLYQPINDYFGGEKTVISSGLETAREVSALLTFSNEHAGYQRQPKH 234 Query: 249 ALFLSGKPDIAMRRLMQGFGLKS 271 F++G+ + R + + + + Sbjct: 235 RFFVTGETEYIERIITEWLNISA 257 >gi|228913534|ref|ZP_04077163.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846121|gb|EEM91143.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 279 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 13 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 71 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 72 PLKALVVACNTAAATALAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 130 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 131 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTEEDI 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 185 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 244 Query: 253 SG 254 +G Sbjct: 245 TG 246 >gi|153952642|ref|YP_001398928.1| glutamate racemase [Campylobacter jejuni subsp. doylei 269.97] gi|152940088|gb|ABS44829.1| glutamate racemase [Campylobacter jejuni subsp. doylei 269.97] Length = 247 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 15/206 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++ Sbjct: 62 QINMLIIACNTASAYALDVLRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121 Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y L+ Y +I+ +++ + VEE GI + D ++ +E F K Sbjct: 122 SEEYQKRLL--YQGYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218 D ++LACTH+PL+ R LS + D Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196 >gi|312140967|ref|YP_004008303.1| glutamate racemase [Rhodococcus equi 103S] gi|325675397|ref|ZP_08155081.1| glutamate racemase [Rhodococcus equi ATCC 33707] gi|311890306|emb|CBH49624.1| putative glutamate racemase [Rhodococcus equi 103S] gi|325553368|gb|EGD23046.1| glutamate racemase [Rhodococcus equi ATCC 33707] Length = 255 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 21/218 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L P+ + D G P+G ++ + R++ +D+ Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLMLSLDPEGAPWGPRDERWVIDRVVGTARRAVDRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ V+ CNTA + +R+ S+ +G VPAIK AAA S ++I +T AT Sbjct: 63 AEVV-VLPCNTASVTALEHVRADLGDSIPVIGTVPAIKPAAAVCDS--VAIWATAATTAS 119 Query: 135 TYTSNLIHSYVSQCHI-----HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 Y +NL+ + + + H ++ I VE I ++ G Sbjct: 120 DYQANLVKEFANGSSVVGVACHGLADAIDLGDVEAARAAIAAAAARTPDDVTG------- 172 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 +VL CTHYPL+ P V D+++++A Sbjct: 173 -----VVLGCTHYPLVADEIAAHLPDGVALFDSAEAVA 205 >gi|183220317|ref|YP_001838313.1| glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910434|ref|YP_001961989.1| glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775110|gb|ABZ93411.1| Glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778739|gb|ABZ97037.1| Glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 270 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 19/192 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ + +IY D V PYG + + F +++K Sbjct: 9 IGIFDSGLGGLSVLRTLWKETSNIDYIYFGDLVHSPYGQKSKQKVIELSKNAFEYLIEKD 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + + ACNTA + D LR S+ G PAIK A A I++ +T TL+ Sbjct: 69 CEAV-LFACNTATSAAADFLRKEH-SIPIFGMEPAIKPALAENPGVKIAVFATDLTLKEE 126 Query: 136 YTSNLIHSYVSQCHIHLV-----SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 NL+ I V + +I + R E+ + K +K E Sbjct: 127 KFKNLVTGLAKGSEILPVPCEGLAKLIDSDRWEDAWDFLDSKIKLVKSE----------- 175 Query: 191 RTDVIVLACTHY 202 T++IVL CTHY Sbjct: 176 -TEIIVLGCTHY 186 >gi|239939360|ref|ZP_04691297.1| putative glutamate racemase [Streptomyces roseosporus NRRL 15998] gi|291442794|ref|ZP_06582184.1| glutamate racemase [Streptomyces roseosporus NRRL 15998] gi|291345741|gb|EFE72645.1| glutamate racemase [Streptomyces roseosporus NRRL 15998] Length = 261 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 81/196 (41%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G L + + + Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDLTALALDVARAAAAQ- 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P +IACNTA +R+ P++ +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIIACNTASVHALPAIRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE E I + + Sbjct: 120 PYQRGLIAEFGGSAEVTEVPCPGLADAVEHG------DEAGIDRTVAAAAALTP-PDVRA 172 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 173 VVLGCTHYELVATRIR 188 >gi|327332416|gb|EGE74152.1| glutamate racemase [Propionibacterium acnes HL097PA1] Length = 284 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYDVSVIDVIMPAARRASAATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMAESG 229 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 + D FL+ + + RRLM+GF Sbjct: 230 LLHSHPRDSSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|49476942|ref|YP_035099.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328498|gb|AAT59144.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 276 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA T L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAATATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLTEEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|295105836|emb|CBL03379.1| glutamate racemase [Gordonibacter pamelaeae 7-10-1-b] Length = 313 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 27/273 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL V +++ +P +Y+ D PYG + + + ++D+ Sbjct: 35 IGVFDSGFGGLTVARELAKALPRESIVYLGDSARCPYGPRTLQEVDGFVQQIGGWLVDRG 94 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR- 133 ++ VIACNTA + TFP + +G V P + AA T++ + +++T AT+ Sbjct: 95 VKMV-VIACNTATAAGLAHAQRTFP-VPVIGVVEPGARAAAHATRNNRVGVVATKATVES 152 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---------------K 178 YT + H V S VE GI++ E ++ + Sbjct: 153 NAYTKAIRHLDAGIT----VFSTATPRFVEIAEQGIRMAEGPLENYTSLASKVYIRPAFE 208 Query: 179 EIEGCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 EI ++E D +VL CTH+PL+ + + V + +S AR +L R Sbjct: 209 EIAREYLEPLRRAGVDTLVLGCTHFPLLKALIGGVMGREVTLISSSTEAARDVAEILARR 268 Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 + + + F + D+ R GFG + Sbjct: 269 SAYARADHEARYEFFTTGDDLEEFR---GFGSR 298 >gi|70726812|ref|YP_253726.1| glutamate racemase [Staphylococcus haemolyticus JCSC1435] gi|123659934|sp|Q4L5F5|MURI_STAHJ RecName: Full=Glutamate racemase gi|68447536|dbj|BAE05120.1| Glutamate racemase [Staphylococcus haemolyticus JCSC1435] Length = 266 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 9/246 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ L + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGDEVKQFTTQLANKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + ++ + VIACNTA + + L+ P + +G + P + A T++ + IL T Sbjct: 61 M-QFDIKMLVIACNTATAVALEHLQQMLP-IPVIGVIEPGSRTAIMTTKNQNVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189 T++ + I H++ V+ VE+ ++ + I I + Sbjct: 119 TIKSEAYRHHIKHINPNVHVYGVACPGFVPLVEQ----MRYDDPTITSIVIHQTLKQWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248 D I+L CTHYPL+ + + AR LL N H + +H Sbjct: 175 TDADTIILGCTHYPLLYKPINDYFGGEKKVISSGLETAREVSALLTFSNEHASYTQHPEH 234 Query: 249 ALFLSG 254 F +G Sbjct: 235 RFFATG 240 >gi|282916399|ref|ZP_06324161.1| glutamate racemase [Staphylococcus aureus subsp. aureus D139] gi|282319839|gb|EFB50187.1| glutamate racemase [Staphylococcus aureus subsp. aureus D139] Length = 266 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 33/258 (12%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGQCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ I I + K Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYS--------DPTITSIVIHQTLK 170 Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPV-DWLDNSDSI-------ARRARCLLPRI 237 R +D ++L CTHYPL+ P+ D+ D ++ AR LL Sbjct: 171 RWRNSESDTVILGCTHYPLLYK--------PIYDYFDGKKTVISSGLETAREVSALLTFS 222 Query: 238 NTHQTRV-FDDHALFLSG 254 N H + DH F +G Sbjct: 223 NEHASYTEHPDHRFFATG 240 >gi|116494343|ref|YP_806077.1| bifunctional glutamate racemase/xanthosine/inosine pyrophosphatase [Lactobacillus casei ATCC 334] gi|116104493|gb|ABJ69635.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family [Lactobacillus casei ATCC 334] Length = 484 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 16/252 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 K+ +L VIACNT A LIK L + +G + P + A TQ+G I I++ Sbjct: 63 KKHIKML-VIACNTATAAALPLIKANL-----DIPVIGVIKPGSRAALKATQTGHIGIIA 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + + + + +++ S VE I + + ++ E Sbjct: 117 TEGTVKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHED 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246 D ++L CTHYP++ + + + V +D+ LL + + + Sbjct: 177 ----IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTP 232 Query: 247 DHALFLSGKPDI 258 H + +G P + Sbjct: 233 THEYYTTGAPSM 244 >gi|191637675|ref|YP_001986841.1| Glutamate racemase [Lactobacillus casei BL23] gi|190711977|emb|CAQ65983.1| Glutamate racemase [Lactobacillus casei BL23] gi|327381734|gb|AEA53210.1| Ribonuclease PH/Ham1 protein [Lactobacillus casei LC2W] gi|327384898|gb|AEA56372.1| Ribonuclease PH/Ham1 protein [Lactobacillus casei BD-II] Length = 484 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 16/252 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 K+ +L VIACNT A LIK L + +G + P + A TQ+G I I++ Sbjct: 63 KKHIKML-VIACNTATAAALPLIKANL-----DIPVIGVIKPGSRAALKATQTGHIGIIA 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + + + + +++ S VE I + + ++ E Sbjct: 117 TEGTVKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHED 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246 D ++L CTHYP++ + + + V +D+ LL + + + Sbjct: 177 ----IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTP 232 Query: 247 DHALFLSGKPDI 258 H + +G P + Sbjct: 233 THEYYTTGAPSM 244 >gi|153003580|ref|YP_001377905.1| glutamate racemase [Anaeromyxobacter sp. Fw109-5] gi|152027153|gb|ABS24921.1| glutamate racemase [Anaeromyxobacter sp. Fw109-5] Length = 259 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 12/246 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V + + +P +Y+ D PYG + + + +L Sbjct: 2 SRIGIFDSGVGGLTVQRAILEALPSVDTVYLGDTARVPYGTKSADTVTQ-YSLRNARLLA 60 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 +++ L V+ACNTA + LR+ ++ LG V P + AA ++ G I ++ T T+ Sbjct: 61 RHEIDLLVVACNTASAVALPALRAEL-AVPVLGVVEPGARAAARASRGGRIGVIGTQGTV 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191 + + + + + + EE G D + + ++ R Sbjct: 120 SSGAYQSALRAARPDAEVVARACPLFVPLAEE---GWTDPGDPVVRGAVARYLAPLREAR 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHYPL+ + P V +D++++IA R R+ + R HA Sbjct: 177 IDTLVLGCTHYPLLREAIARELPE-VVLVDSAEAIAAEVRA---RMGEERGR-EGSHAFL 231 Query: 252 LSGKPD 257 ++ P+ Sbjct: 232 VTDAPE 237 >gi|52081340|ref|YP_080131.1| glutamate racemase [Bacillus licheniformis ATCC 14580] gi|52004551|gb|AAU24493.1| glutamate racemase [Bacillus licheniformis ATCC 14580] Length = 271 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 98/224 (43%), Gaps = 6/224 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ IY+ D PYG + + + + + Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYLGDTKRCPYGPRDRKEVLSYTWEMTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L ++ + VIACNTA + +E+ S ++ +G V P + A T++ I ++ T Sbjct: 61 LSRHHIKMLVIACNTATAIALEEI-SREVAIPVIGVVQPGARTAIKVTENQRIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + ++ + VE K ++ + + Sbjct: 120 TIKSGAYEEALLSLNGDLTVENLACPMFVPFVESG----KFLDETADEIVRTSLHPLRDS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYP++ ++ V+ + + D AR +L Sbjct: 176 SIDTLILGCTHYPILKEPIQRYMGERVNIISSGDETAREVSTIL 219 >gi|197693746|gb|ACH71542.1| glutamate racemase [Helicobacter pylori] gi|197693748|gb|ACH71543.1| glutamate racemase [Helicobacter pylori] gi|197693750|gb|ACH71544.1| glutamate racemase [Helicobacter pylori] gi|197693752|gb|ACH71545.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ ++ +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKKAPIL-VLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y+S H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLSVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|227534493|ref|ZP_03964542.1| glutamate racemase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187892|gb|EEI67959.1| glutamate racemase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 484 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 16/252 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 K+ +L VIACNT A LIK L + +G + P + A TQ+G I I++ Sbjct: 63 KKHIKML-VIACNTATAAALPLIKANL-----DIPVIGVIKPGSRAALKATQTGHIGIIA 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + + + + +++ S VE I + + ++ E Sbjct: 117 TEGTVKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHED 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246 D ++L CTHYP++ + + + V +D+ LL + + + Sbjct: 177 ----IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTP 232 Query: 247 DHALFLSGKPDI 258 H + +G P + Sbjct: 233 THEYYTTGAPSM 244 >gi|283770211|ref|ZP_06343103.1| glutamate racemase [Staphylococcus aureus subsp. aureus H19] gi|283460358|gb|EFC07448.1| glutamate racemase [Staphylococcus aureus subsp. aureus H19] Length = 266 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 33/258 (12%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ I I + K Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYS--------DPTITSIVIHQTLK 170 Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPV-DWLDNSDSI-------ARRARCLLPRI 237 R +D ++L CTHYPL+ P+ D+ D ++ AR LL Sbjct: 171 RWRNSESDTVILGCTHYPLLYK--------PIYDYFDGKKTVISSGLETAREVSALLTFS 222 Query: 238 NTHQTRV-FDDHALFLSG 254 N H + DH F +G Sbjct: 223 NEHASYTEHPDHRFFATG 240 >gi|187931550|ref|YP_001891534.1| glutamate racemase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712459|gb|ACD30756.1| glutamate racemase [Francisella tularensis subsp. mediasiatica FSC147] Length = 265 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 15/203 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL +++ + ++P IY D PYG ++K Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQK 53 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 ++D+ + +IACNT + KD ++ ++ + + A + Sbjct: 54 FAAQTAKFLIDQEVKAI-IIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++TPAT+ + +H ++ + S +EE I E + KE Sbjct: 111 VGVIATPATINSNAYALQMHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVE-LVAKEYLS 169 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 F K ++L CTHYP+I Sbjct: 170 YF---HDKNIQALILGCTHYPII 189 >gi|301065854|ref|YP_003787877.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family [Lactobacillus casei str. Zhang] gi|300438261|gb|ADK18027.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family [Lactobacillus casei str. Zhang] Length = 484 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 16/252 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 K+ +L VIACNT A LIK L + +G + P + A TQ+G I I++ Sbjct: 63 KKHIKML-VIACNTATAAALPLIKANL-----DIPVIGVIKPGSRAALKATQTGHIGIIA 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + + + + +++ S VE I + + ++ E Sbjct: 117 TEGTVKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHED 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246 D ++L CTHYP++ + + + V +D+ LL + + + Sbjct: 177 ----IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTP 232 Query: 247 DHALFLSGKPDI 258 H + +G P + Sbjct: 233 THEYYTTGAPSM 244 >gi|283470360|emb|CAQ49571.1| glutamate racemase [Staphylococcus aureus subsp. aureus ST398] Length = 266 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 9/246 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189 T++ I +H V+ VE+ ++ + I I Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQ----MRYNDPTITSIVIHQTLKRWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248 + D ++L CTHYPL+ + + AR LL N H + DH Sbjct: 175 SKADTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDH 234 Query: 249 ALFLSG 254 F +G Sbjct: 235 RFFATG 240 >gi|308182705|ref|YP_003926832.1| glutamate racemase [Helicobacter pylori PeCan4] gi|308064890|gb|ADO06782.1| glutamate racemase [Helicobacter pylori PeCan4] Length = 255 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 32/248 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQ-------LSPWP---------VDWLDNSDSIARRARCLL 234 +V++L CTH+PLI LS P V +L ++ + A C Sbjct: 173 LPEVVILGCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVGYLQQKYTLKKNA-CAF 231 Query: 235 PRINTHQT 242 P++ H + Sbjct: 232 PKVEFHAS 239 >gi|313812338|gb|EFS50052.1| glutamate racemase [Propionibacterium acnes HL025PA1] Length = 284 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMAESG 229 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 + D FL+ + + RRLM+GF Sbjct: 230 LLHSHPRDSSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|227873305|ref|ZP_03991570.1| possible glutamate racemase [Oribacterium sinus F0268] gi|227840872|gb|EEJ51237.1| possible glutamate racemase [Oribacterium sinus F0268] Length = 121 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 1/106 (0%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+K++ +P FI+ D PYG + ++ + + + + Sbjct: 5 KAIGIFDSGLGGLSVLRKLKQELPGEDFIFYGDQKHAPYGEKSEEEVRSLSLSAYRFLQE 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 K +VIACNTA + LR FP +G PA+K A Q Sbjct: 65 KGVKA-TVIACNTATSAAAPYLRELFPEDIIIGMEPAVKPAVEALQ 109 >gi|196037606|ref|ZP_03104917.1| glutamate racemase [Bacillus cereus NVH0597-99] gi|218902060|ref|YP_002449894.1| glutamate racemase [Bacillus cereus AH820] gi|196031848|gb|EDX70444.1| glutamate racemase [Bacillus cereus NVH0597-99] gi|218535080|gb|ACK87478.1| glutamate racemase [Bacillus cereus AH820] Length = 276 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|313888088|ref|ZP_07821762.1| glutamate racemase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845778|gb|EFR33165.1| glutamate racemase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 276 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 29/212 (13%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK---RLMFLFS 69 N I +DSG+GGL VL+ + +F++ D + PYG + +K +M F Sbjct: 3 NNVIGFYDSGVGGLSVLKVALNKIKNKNFVFFGDTLRMPYGARTNEEIKNYTMEVMGFFE 62 Query: 70 DILDKYQPVLSVIACNTAFT--LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 D+ LS+IACNTA + L + R +P +G V P + A T++ ++++ Sbjct: 63 DL----DVDLSIIACNTATSHGLKESNERYKYP---IIGVVEPGSENALERTKTKRVALV 115 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV------EEYACGIKIKEDEIKKEI 180 +T + + ++ S + V L + EEY GI +KK + Sbjct: 116 ATKSCVESGVYDKVLKSMDPSIELRSVYCPDLTLAIERGEFEEEYMDGI------VKKYL 169 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212 + E D ++L CTHYPL+ F+++ Sbjct: 170 DYF----EDYDFDTMILGCTHYPLVEDSFKRI 197 >gi|227894671|ref|ZP_04012476.1| glutamate racemase [Lactobacillus ultunensis DSM 16047] gi|227863510|gb|EEJ70931.1| glutamate racemase [Lactobacillus ultunensis DSM 16047] Length = 268 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 24/240 (10%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNW--ED--HALKKRLMFLFSDILDKYQPVLSVIA 83 V++K+ +P I++ D+ PYGN ED + +K + FL ++ + L +IA Sbjct: 18 VVKKVIKKLPNESTIFIGDNAHMPYGNRTKEDIINLTRKSVKFLLNNDVK-----LVIIA 72 Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIH 142 CNTA D + +G + + AAA T++ +++++T T+ IH Sbjct: 73 CNTATAAAMDTIEKEIDPQ-VIGVIQSGALAAARTTKNKKVAVVATSVTIASHAYEKEIH 131 Query: 143 SYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + + +++ LA V E++A +++ ++ +GK D +VL C Sbjct: 132 FRDPEIKVTELAAPKLAPLVEAQEDHATNLRV--------VKESLAPLQGKDFDTLVLGC 183 Query: 200 THYPLIVHVFRQLSPWP-VDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALFLSGKPD 257 THYPLI F + P V LD +D +A+ ++ R + R H + +G PD Sbjct: 184 THYPLIKREFTEAVDDPKVTILDPADQVAQYTFNVMRRDGLFSEERHKAVHKYYTTGNPD 243 >gi|225575569|ref|ZP_03784179.1| hypothetical protein RUMHYD_03661 [Blautia hydrogenotrophica DSM 10507] gi|225037202|gb|EEG47448.1| hypothetical protein RUMHYD_03661 [Blautia hydrogenotrophica DSM 10507] Length = 273 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 11/228 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALK-KRLMFLFSDILDKY 75 +FDSGIGGL V +++ +P +Y D PYG+ +D L+ R + F L+ Sbjct: 11 VFDSGIGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKDTVLRYSRQIIRF---LETE 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA E++ ++ +G + A + AA T + + ++ T T+ Sbjct: 68 NVKAIVVACNTASAFALSEIQKEM-NLPIIGVIEAGARVAAETTMNKKVGVIGTEGTIHS 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + S + ++ + VEE + E EI + +EKE D Sbjct: 127 GIHERWLKSLDQEITVYGKPCPLFVPLVEEGWLKDPVTE-EIAERYLRELLEKE---VDT 182 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 ++L CTHYPL+ + +++ V ++ + A + LL + N T Sbjct: 183 LILGCTHYPLLRSLIQKVVGPEVKLVNPAYETALELKKLLSQENLLST 230 >gi|228932265|ref|ZP_04095149.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827390|gb|EEM73140.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 265 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 11/240 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 60 KALVVACNTAAAAALAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRTDV 194 +H + +H + LA+ VE ED + ++++ + + D Sbjct: 119 YEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDIDT 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 173 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTG 232 >gi|229137668|ref|ZP_04266273.1| Glutamate racemase [Bacillus cereus BDRD-ST26] gi|228645783|gb|EEL02012.1| Glutamate racemase [Bacillus cereus BDRD-ST26] Length = 283 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V +++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 18 IGVLDSGVGGLTVAREIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 76 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 77 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 135 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 136 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTKEDI 189 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++ CTHYPL+ ++ V + +++ A +L + +H F Sbjct: 190 DTLIPGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHQFFT 249 Query: 253 SG 254 +G Sbjct: 250 TG 251 >gi|257438473|ref|ZP_05614228.1| glutamate racemase [Faecalibacterium prausnitzii A2-165] gi|257199052|gb|EEU97336.1| glutamate racemase [Faecalibacterium prausnitzii A2-165] Length = 274 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 111/272 (40%), Gaps = 41/272 (15%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I +FDSG+GGL ++++R +P + +Y D PYG+ + Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRRRLPHENIVYFGDTGRVPYGSRSPETILQ 52 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-------MAFLGAVPAI 111 ++ + FL S + + AC T + ST+P+ + +LG V A Sbjct: 53 YARQDIAFLLSKDVK-----CIMAACGT--------VSSTYPAAEAEKLPVPYLGVVDAA 99 Query: 112 KQAAAY-TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH-----LVSSMILASRVEEY 165 + AA+ T++ I ++ T AT+R L+ V I L ++ A V+ Sbjct: 100 AREAAFSTRNRRIGVIGTAATIRSRSYEALLRRLVPGVEITARPCPLFVPLVEAGYVDHS 159 Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 A K++ K I E D ++L CTHYPLI + + V +D + + Sbjct: 160 A---PDKQEITKLVIAQYLTEIRDAGVDTLILGCTHYPLIKTMIGEFMGRNVVLVDPAKT 216 Query: 226 IARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 A +L ++S PD Sbjct: 217 AAHHLERILSERGLKADHPAGQAHFYVSDAPD 248 >gi|229028645|ref|ZP_04184759.1| Glutamate racemase [Bacillus cereus AH1271] gi|228732664|gb|EEL83532.1| Glutamate racemase [Bacillus cereus AH1271] Length = 281 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 19/246 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 13 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 71 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 72 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQS 130 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 131 NMYEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTKEDI 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----H 248 D ++L CTHYPL+ ++ V + +++ A L I H+ + DD H Sbjct: 185 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIE----LSTILQHKGILSDDLNPKH 240 Query: 249 ALFLSG 254 F +G Sbjct: 241 RFFTTG 246 >gi|289427817|ref|ZP_06429526.1| glutamate racemase [Propionibacterium acnes J165] gi|295131197|ref|YP_003581860.1| glutamate racemase [Propionibacterium acnes SK137] gi|289158999|gb|EFD07194.1| glutamate racemase [Propionibacterium acnes J165] gi|291377076|gb|ADE00931.1| glutamate racemase [Propionibacterium acnes SK137] gi|313773262|gb|EFS39228.1| glutamate racemase [Propionibacterium acnes HL074PA1] gi|313793455|gb|EFS41506.1| glutamate racemase [Propionibacterium acnes HL110PA1] gi|313801146|gb|EFS42409.1| glutamate racemase [Propionibacterium acnes HL110PA2] gi|313808495|gb|EFS46960.1| glutamate racemase [Propionibacterium acnes HL087PA2] gi|313812068|gb|EFS49782.1| glutamate racemase [Propionibacterium acnes HL083PA1] gi|313819230|gb|EFS56944.1| glutamate racemase [Propionibacterium acnes HL046PA2] gi|313821098|gb|EFS58812.1| glutamate racemase [Propionibacterium acnes HL036PA1] gi|313823476|gb|EFS61190.1| glutamate racemase [Propionibacterium acnes HL036PA2] gi|313827021|gb|EFS64735.1| glutamate racemase [Propionibacterium acnes HL063PA1] gi|313829865|gb|EFS67579.1| glutamate racemase [Propionibacterium acnes HL007PA1] gi|313834707|gb|EFS72421.1| glutamate racemase [Propionibacterium acnes HL056PA1] gi|313837924|gb|EFS75638.1| glutamate racemase [Propionibacterium acnes HL086PA1] gi|314925917|gb|EFS89748.1| glutamate racemase [Propionibacterium acnes HL036PA3] gi|314960892|gb|EFT04993.1| glutamate racemase [Propionibacterium acnes HL002PA2] gi|314963344|gb|EFT07444.1| glutamate racemase [Propionibacterium acnes HL082PA1] gi|314974021|gb|EFT18117.1| glutamate racemase [Propionibacterium acnes HL053PA1] gi|314975447|gb|EFT19542.1| glutamate racemase [Propionibacterium acnes HL045PA1] gi|314979454|gb|EFT23548.1| glutamate racemase [Propionibacterium acnes HL072PA2] gi|314988438|gb|EFT32529.1| glutamate racemase [Propionibacterium acnes HL005PA2] gi|314988643|gb|EFT32734.1| glutamate racemase [Propionibacterium acnes HL005PA3] gi|315083402|gb|EFT55378.1| glutamate racemase [Propionibacterium acnes HL027PA2] gi|315086803|gb|EFT58779.1| glutamate racemase [Propionibacterium acnes HL002PA3] gi|315089450|gb|EFT61426.1| glutamate racemase [Propionibacterium acnes HL072PA1] gi|315097779|gb|EFT69755.1| glutamate racemase [Propionibacterium acnes HL038PA1] gi|327325396|gb|EGE67201.1| glutamate racemase [Propionibacterium acnes HL096PA2] gi|327328265|gb|EGE70029.1| glutamate racemase [Propionibacterium acnes HL096PA3] gi|327443689|gb|EGE90343.1| glutamate racemase [Propionibacterium acnes HL043PA1] gi|327449226|gb|EGE95880.1| glutamate racemase [Propionibacterium acnes HL043PA2] gi|327450180|gb|EGE96834.1| glutamate racemase [Propionibacterium acnes HL013PA2] gi|327451244|gb|EGE97898.1| glutamate racemase [Propionibacterium acnes HL092PA1] gi|328756764|gb|EGF70380.1| glutamate racemase [Propionibacterium acnes HL020PA1] gi|328761038|gb|EGF74590.1| glutamate racemase [Propionibacterium acnes HL099PA1] Length = 284 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + + Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDRL 68 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + L +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 69 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESG 229 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 + D FL+ + + RRLM+GF Sbjct: 230 LLHSHPRDSSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|254725743|ref|ZP_05187525.1| glutamate racemase [Bacillus anthracis str. A1055] Length = 276 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTFLQHKGILADNLNPKHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|332676074|gb|AEE72890.1| glutamate racemase [Propionibacterium acnes 266] Length = 297 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + + Sbjct: 22 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDRL 81 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + L +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 82 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 140 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 141 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 194 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 195 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESG 242 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 + D FL+ + + RRLM+GF Sbjct: 243 LLHSHPRDSSRYFLTTGNAERFEKLGRRLMEGF 275 >gi|111114922|ref|YP_709540.1| glutamate racemase [Borrelia afzelii PKo] gi|110890196|gb|ABH01364.1| glutamate racemase [Borrelia afzelii PKo] Length = 261 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 22/199 (11%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++ L Sbjct: 2 KNFKEVIIVFDSGIGGLSYFKYIKSKVGGGYQYVYVADNKNFPYGEKSSEYLLEAVLVLI 61 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y ++ACNT + ++L FP + L V +I A + +++T Sbjct: 62 EKLKKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSSISDLAL----KRVLLIAT 117 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGC 183 TL + + Q ++H +I+ + E EY G K K+D ++ +E Sbjct: 118 NTTLESKFVKD-------QVNMH--EDLIVKAAGELVNFVEY--GKKYKKDALRC-LEAL 165 Query: 184 FIEKEGKRTDVIVLACTHY 202 E +++ L CTHY Sbjct: 166 KSEVVNTGREIVFLGCTHY 184 >gi|217958454|ref|YP_002337002.1| glutamate racemase [Bacillus cereus AH187] gi|217063367|gb|ACJ77617.1| glutamate racemase [Bacillus cereus AH187] Length = 275 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V +++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVAREIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++ CTHYPL+ ++ V + +++ A +L + +H F Sbjct: 182 DTLIPGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHQFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|317181866|dbj|BAJ59650.1| glutamate racemase [Helicobacter pylori F57] Length = 255 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +++ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIRQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMKHFTLSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|283458299|ref|YP_003362918.1| glutamate racemase [Rothia mucilaginosa DY-18] gi|283134333|dbj|BAI65098.1| glutamate racemase [Rothia mucilaginosa DY-18] Length = 350 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 12/227 (5%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I +FDSG+GGL V + + +P IYV D PYG + ++ + Sbjct: 22 PVGPTAAAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 81 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGL 122 + +++D +L VIACNTA + + R + + + PA ++A A T++ Sbjct: 82 IMDELVDSGVKML-VIACNTASAAVLRDARERYTRQYGIPVIEVIQPAARRALAATRNRK 140 Query: 123 ISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T AT+ R Y + +H V+ VE+ GI + ++ E Sbjct: 141 IGVIATEATVTSRAYEDTF--AITPNLEVHSVACPRFVEFVEK---GITSGPELLETARE 195 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 K+ D +VL CTHYPL+ V + V + ++D A+ Sbjct: 196 YLQPLKDAG-VDTLVLGCTHYPLLAGVISYIMGEDVTLVSSADETAK 241 >gi|255326294|ref|ZP_05367380.1| glutamate racemase [Rothia mucilaginosa ATCC 25296] gi|255296748|gb|EET76079.1| glutamate racemase [Rothia mucilaginosa ATCC 25296] Length = 350 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 12/227 (5%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I +FDSG+GGL V + + +P IYV D PYG + ++ + Sbjct: 22 PVGPTAAAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 81 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGL 122 + +++D +L VIACNTA + + R + + + PA ++A A T++ Sbjct: 82 IMDELVDSGVKML-VIACNTASAAVLRDARERYTRQYGIPVIEVIQPAARRALAATRNRK 140 Query: 123 ISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T AT+ R Y + +H V+ VE+ GI + ++ E Sbjct: 141 IGVIATEATVTSRAYEDTF--AITPNLEVHSVACPRFVEFVEK---GITSGPELLETARE 195 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 K+ D +VL CTHYPL+ V + V + ++D A+ Sbjct: 196 YLQPLKDAG-VDTLVLGCTHYPLLAGVISYIMGEDVTLVSSADETAK 241 >gi|197693666|gb|ACH71502.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVA-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI H Sbjct: 173 LPEVIILGCTHFPLIAH 189 >gi|153820612|ref|ZP_01973279.1| glutamate racemase [Vibrio cholerae NCTC 8457] gi|126508845|gb|EAZ71439.1| glutamate racemase [Vibrio cholerae NCTC 8457] Length = 176 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 5/120 (4%) Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 A+ S I +++TPAT++R YT LI + + ++ L+ S L + EE G + + Sbjct: 17 ASLIASKAIGLIATPATVKRQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLE 76 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 E+ ++ DV VL CTH+PLI +Q+ V +D+ +IARR + LL Sbjct: 77 EL-----ASILQPLKNTIDVAVLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 131 >gi|161527572|ref|YP_001581398.1| glutamate racemase [Nitrosopumilus maritimus SCM1] gi|160338873|gb|ABX11960.1| Glutamate racemase [Nitrosopumilus maritimus SCM1] Length = 251 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 20/242 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+G L ++++M+ + IY AD +PYG L +R+M ++L+K+ Sbjct: 4 IAVFDSGLGSLSIIKEMQKAF-KSEIIYFADQQSYPYGKKSQAQL-ERIMRKSINLLEKF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P V+A NT +L+ D + P +K+A T+S I IL+T + + Sbjct: 62 SPDFIVVASNTP-SLMLD-----LGTNRIFVVKPPLKEAKKITKSKQIGILATESATKSK 115 Query: 136 YTSNLIHSYVSQC-HIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 S I + + I ++ L VE ++ K E IKK++E I E + Sbjct: 116 GLSKYIQENIPKSFKIFKINGTKLVDLVESGKFLTEKKYCEKIIKKKLE---ILNEN-QI 171 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D + L+ TH P + + P + ++D + +A++ + +I Q++ + +F Sbjct: 172 DAVTLSSTHLPFLKKYLEKEFPN-IQFVDPGNIVAQK---IYFKIKNKQSKK-NSLKIFT 226 Query: 253 SG 254 SG Sbjct: 227 SG 228 >gi|229101609|ref|ZP_04232332.1| Glutamate racemase [Bacillus cereus Rock3-28] gi|228681851|gb|EEL36005.1| Glutamate racemase [Bacillus cereus Rock3-28] Length = 264 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 11/240 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVECLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 60 KALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRTDV 194 +H + +H + LA+ VE ED + ++++ + + D Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDIDT 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 173 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 232 >gi|308061881|gb|ADO03769.1| glutamate racemase [Helicobacter pylori Cuz20] Length = 255 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ +IKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILSIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CTFPKVEFHAS 239 >gi|227486394|ref|ZP_03916710.1| possible glutamate racemase [Anaerococcus lactolyticus ATCC 51172] gi|227235575|gb|EEI85590.1| possible glutamate racemase [Anaerococcus lactolyticus ATCC 51172] Length = 249 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 15/210 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI--- 71 +I IFDSG+GG+ VL ++ + ++ Y+ D++ PYGN K + +DI Sbjct: 3 NIGIFDSGLGGIAVLNELA-KKNKANYFYLGDNLRVPYGNRS----KAEITSFATDIVNF 57 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ Y +IACNT KD LR F A AI+ A Y L L T AT Sbjct: 58 LEGYDIDYYIIACNTISVTCKDYLREKFKKKFITIADMAIEAAMEYDGDYL--ALGTKAT 115 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + C ++ ++ L + +E G ++ + ++ K+ Sbjct: 116 MESHFYKTTLEA-KKPCKVYESKAIDLVNLIE----GGVLEGATLNGALDEYLSIANEKK 170 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 I+LACTHYP+I + + + +D Sbjct: 171 LANIILACTHYPIIKGEISKRLDYKANIID 200 >gi|42780015|ref|NP_977262.1| glutamate racemase [Bacillus cereus ATCC 10987] gi|42735933|gb|AAS39870.1| glutamate racemase [Bacillus cereus ATCC 10987] Length = 275 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAAALTALQKAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGENVTIISSAEETAIELSTILQHKGILSDNLNPVHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|15594446|ref|NP_212234.1| glutamate racemase (murI) [Borrelia burgdorferi B31] gi|11386901|sp|O51127|MURI_BORBU RecName: Full=Glutamate racemase gi|2687975|gb|AAC66479.1| glutamate racemase (murI) [Borrelia burgdorferi B31] Length = 261 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 17/196 (8%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL Sbjct: 2 KNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLIE 61 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + Y V+ACNT + ++L FP + L V ++ + +++T Sbjct: 62 KLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIATN 117 Query: 130 ATLRRTYTS---NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 TL + N+ + + + LV+ + ++YA + +E E Sbjct: 118 TTLESKFVKDQVNIHNDLIVKAAGELVNFVEYGENYKKYAL----------RCLEALKFE 167 Query: 187 KEGKRTDVIVLACTHY 202 +++ L CTHY Sbjct: 168 VVNTGREIVFLGCTHY 183 >gi|197693660|gb|ACH71499.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE G ++ E ++ I Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKILP 174 Query: 188 EGKRTDVIVLACTHYPLIVH 207 E VI+L CTH+PLI Sbjct: 175 E-----VIILGCTHFPLIAQ 189 >gi|312147962|gb|ADQ30621.1| glutamate racemase [Borrelia burgdorferi JD1] Length = 261 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 17/196 (8%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL Sbjct: 2 KNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLIE 61 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + Y V+ACNT + ++L FP + L V ++ + +++T Sbjct: 62 KLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIATN 117 Query: 130 ATLRRTYTS---NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 TL + N+ + + + LV+ + ++YA + +E E Sbjct: 118 TTLESKFVKDQVNIHNDLIVKAAGELVNFVEYGENYKKYAL----------RCLEALKFE 167 Query: 187 KEGKRTDVIVLACTHY 202 +++ L CTHY Sbjct: 168 VVNTGREIVFLGCTHY 183 >gi|33861174|ref|NP_892735.1| putative aspartate and glutamate racemase:glutamate racemase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639906|emb|CAE19076.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 264 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 23/246 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL--- 72 I IFDSGIGG +L + + Y+AD PYGN ++ F+ DI Sbjct: 5 IGIFDSGIGGFTILSALMKTREDIEVFYLADTKRVPYGNKNIEQIR----FIAKDICNWF 60 Query: 73 -DKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 DK VL +IACNT D L + P + +V I I +L+TP Sbjct: 61 KDKNLDVL-LIACNTTNACALDILENNLQIPCFDLINSVSEI------VTKKYIGVLATP 113 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT++ +Y +I S + + +E+ + + + ++ + KE Sbjct: 114 ATIKTSYYKKIIESKRENVQVFQQACPEFVPEIEK--TNLDLNKLNYLSDLYINPLLKEN 171 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR--RARCLLPRINTHQTRVFDD 247 + I+L C+HYPLI +V + + +D S ++ L+P+ ++++ D+ Sbjct: 172 --IEEIILGCSHYPLIYNVLKSKVHSNIRIIDPSAALVNNFNNSFLIPKNYSYESTSSDN 229 Query: 248 HALFLS 253 F++ Sbjct: 230 IKFFVT 235 >gi|84494378|ref|ZP_00993497.1| glutamate racemase [Janibacter sp. HTCC2649] gi|84383871|gb|EAP99751.1| glutamate racemase [Janibacter sp. HTCC2649] Length = 274 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 12/219 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG GGL V + + +P Y+ D PYG + + ++ Sbjct: 3 DSPIGIFDSGYGGLTVARAVLDQLPHESVAYLGDTARTPYGPRPIAETRAFALECLDRLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA + + R + PA+++A T++G I ++ST T Sbjct: 63 NHGVKAL-VIACNTASAAVLHDARERYDVPVVEVIRPAVRRAVGATRTGRIGVISTLGTH 121 Query: 133 R-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEG 189 + R Y + ++ + H+ V+S V+ G+ E+ + +E E++ Sbjct: 122 QSRAY----LDAFAAAPHL-TVTSEPCPRFVDFVESGVTGGEELRTVAREYLAPLQEQD- 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYPL+ V + V + +++ A+ Sbjct: 176 --VDTLILGCTHYPLLAGVISYVMGPDVTLVSSAEETAK 212 >gi|126695981|ref|YP_001090867.1| putative aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. MIT 9301] gi|126543024|gb|ABO17266.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. MIT 9301] Length = 264 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 19/246 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSGIGG +L + + + Y+AD P+GN + ++ + + +DK Sbjct: 7 IFDSGIGGFTILNSLLKIRKDVEVFYLADTKRIPFGNKDSKEIRLIAKEICTFFVDKNLD 66 Query: 78 VLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 L ++ACNT A +++D L+ P + +V + + +I +L+T T+R Sbjct: 67 AL-LVACNTTNACALDILEDNLK--IPCFDLINSV------SELVEKQIIGVLATSTTVR 117 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +Y I++ I S +E+ K+ D++ + K + Sbjct: 118 SSYYEKAINTKKENTIILQQECPKFVSEIEKE----KLNLDKLNSLSDLYLRPLINKNIE 173 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR--ARCLLPRINTHQTRVFDDHALF 251 ++L C+HYPLI + R+ + +D S + ++ +P ++ F++ F Sbjct: 174 ELILGCSHYPLIYDILRKKLGPNIKIIDPSIGLIKKFNESFAIPETERCESISFENVKFF 233 Query: 252 LSGKPD 257 ++ + D Sbjct: 234 VTSERD 239 >gi|197693710|gb|ACH71524.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE G ++ E ++ I E Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKILPE-- 175 Query: 191 RTDVIVLACTHYPLIVH 207 VI+L CTH+PLI Sbjct: 176 ---VIILGCTHFPLIAQ 189 >gi|295100376|emb|CBK97921.1| glutamate racemase [Faecalibacterium prausnitzii L2-6] Length = 274 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 27/213 (12%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I +FDSG+GGL ++++R +P + +Y D PYG+ + Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPNENIVYFGDTGRVPYGSRSPETILQ 52 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY- 117 ++ + FL S + + AC T ++ + P + +LG V A + AA+ Sbjct: 53 YARQDIAFLLSKDVK-----CIMAACGTVSSIYPAAEAAKLP-VPYLGVVDAAAREAAFV 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH-----LVSSMILASRVEEYACGIKIK 172 T++ I ++ T AT+R ++ V I L ++ A V+ A K Sbjct: 107 TRNRRIGVIGTAATIRSRSYETVLRKLVPGVEITAQPCPLFVPLVEAGYVDHSALD---K 163 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 + + I E D ++L CTHYPLI Sbjct: 164 QQVTRLVIAQYLAEVREAGVDTLILGCTHYPLI 196 >gi|197693872|gb|ACH71605.1| glutamate racemase [Helicobacter pylori] gi|197693874|gb|ACH71606.1| glutamate racemase [Helicobacter pylori] gi|197693876|gb|ACH71607.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI H Sbjct: 173 LPEVIILGCTHFPLIAH 189 >gi|49483313|ref|YP_040537.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425201|ref|ZP_05601627.1| glutamate racemase [Staphylococcus aureus subsp. aureus 55/2053] gi|257427864|ref|ZP_05604262.1| glutamate racemase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430499|ref|ZP_05606881.1| glutamate racemase [Staphylococcus aureus subsp. aureus 68-397] gi|257433261|ref|ZP_05609619.1| glutamate racemase [Staphylococcus aureus subsp. aureus E1410] gi|257436100|ref|ZP_05612147.1| glutamate racemase [Staphylococcus aureus subsp. aureus M876] gi|258423807|ref|ZP_05686693.1| glutamate racemase [Staphylococcus aureus A9635] gi|282903699|ref|ZP_06311587.1| glutamate racemase [Staphylococcus aureus subsp. aureus C160] gi|282905467|ref|ZP_06313322.1| glutamate racemase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908441|ref|ZP_06316272.1| glutamate racemase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910725|ref|ZP_06318528.1| glutamate racemase [Staphylococcus aureus subsp. aureus WBG10049] gi|282913925|ref|ZP_06321712.1| glutamate racemase [Staphylococcus aureus subsp. aureus M899] gi|282918848|ref|ZP_06326583.1| glutamate racemase [Staphylococcus aureus subsp. aureus C427] gi|282923970|ref|ZP_06331646.1| glutamate racemase [Staphylococcus aureus subsp. aureus C101] gi|283957893|ref|ZP_06375344.1| glutamate racemase [Staphylococcus aureus subsp. aureus A017934/97] gi|293500960|ref|ZP_06666811.1| glutamate racemase [Staphylococcus aureus subsp. aureus 58-424] gi|293509917|ref|ZP_06668626.1| glutamate racemase [Staphylococcus aureus subsp. aureus M809] gi|293526504|ref|ZP_06671189.1| glutamate racemase [Staphylococcus aureus subsp. aureus M1015] gi|295427637|ref|ZP_06820269.1| glutamate racemase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591408|ref|ZP_06950046.1| glutamate racemase [Staphylococcus aureus subsp. aureus MN8] gi|56749237|sp|Q6GHT5|MURI_STAAR RecName: Full=Glutamate racemase gi|49241442|emb|CAG40126.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus MRSA252] gi|257272177|gb|EEV04309.1| glutamate racemase [Staphylococcus aureus subsp. aureus 55/2053] gi|257274705|gb|EEV06192.1| glutamate racemase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278627|gb|EEV09246.1| glutamate racemase [Staphylococcus aureus subsp. aureus 68-397] gi|257281354|gb|EEV11491.1| glutamate racemase [Staphylococcus aureus subsp. aureus E1410] gi|257284382|gb|EEV14502.1| glutamate racemase [Staphylococcus aureus subsp. aureus M876] gi|257846039|gb|EEV70067.1| glutamate racemase [Staphylococcus aureus A9635] gi|282313942|gb|EFB44334.1| glutamate racemase [Staphylococcus aureus subsp. aureus C101] gi|282316658|gb|EFB47032.1| glutamate racemase [Staphylococcus aureus subsp. aureus C427] gi|282321993|gb|EFB52317.1| glutamate racemase [Staphylococcus aureus subsp. aureus M899] gi|282325330|gb|EFB55639.1| glutamate racemase [Staphylococcus aureus subsp. aureus WBG10049] gi|282328106|gb|EFB58388.1| glutamate racemase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330759|gb|EFB60273.1| glutamate racemase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595317|gb|EFC00281.1| glutamate racemase [Staphylococcus aureus subsp. aureus C160] gi|283790042|gb|EFC28859.1| glutamate racemase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920576|gb|EFD97639.1| glutamate racemase [Staphylococcus aureus subsp. aureus M1015] gi|291095965|gb|EFE26226.1| glutamate racemase [Staphylococcus aureus subsp. aureus 58-424] gi|291467367|gb|EFF09884.1| glutamate racemase [Staphylococcus aureus subsp. aureus M809] gi|295127995|gb|EFG57629.1| glutamate racemase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576294|gb|EFH95010.1| glutamate racemase [Staphylococcus aureus subsp. aureus MN8] gi|312438474|gb|ADQ77545.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH60] gi|315193821|gb|EFU24216.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus CGS00] Length = 266 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 17/250 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ I I + K Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYS--------DPTITSIVIHQTLK 170 Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV- 244 R +D ++L CTHYPL+ + + AR LL N H + Sbjct: 171 RWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTE 230 Query: 245 FDDHALFLSG 254 DH F +G Sbjct: 231 HPDHRFFATG 240 >gi|228944589|ref|ZP_04106959.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229120481|ref|ZP_04249728.1| Glutamate racemase [Bacillus cereus 95/8201] gi|228663066|gb|EEL18659.1| Glutamate racemase [Bacillus cereus 95/8201] gi|228815049|gb|EEM61300.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 265 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 11/240 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 60 KALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRTDV 194 +H + +H + LA+ VE ED + ++++ + + D Sbjct: 119 YEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDIDT 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 173 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTG 232 >gi|256372517|ref|YP_003110341.1| glutamate racemase [Acidimicrobium ferrooxidans DSM 10331] gi|256009101|gb|ACU54668.1| glutamate racemase [Acidimicrobium ferrooxidans DSM 10331] Length = 276 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 10/199 (5%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++ I +FDSG GGL +L +R L+P +Y D PYG+ + + + + Sbjct: 4 ERAHGPIGVFDSGFGGLNILAALRDLLPSEDLVYFGDSARSPYGSRPADEVVRFSLEIGR 63 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILST 128 ++D+ L V+ CNTA + D LR+ ++ +G V A +AA SG + ++ T Sbjct: 64 WLVDEAGSKLVVVGCNTASAVALDALRAEL-AVPVIGVVGAGARAARRCVGSGRVGVIGT 122 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 RT S ++ V+ L VE + ++ I Sbjct: 123 ----ERTIASGAYQRALADDAGVAVACPGLVEFVEAG----QTTGPAVRAVIADRLAPVV 174 Query: 189 GKRTDVIVLACTHYPLIVH 207 +V++L CTHYP + Sbjct: 175 DAGVEVLLLGCTHYPYLAR 193 >gi|222151562|ref|YP_002560718.1| hypothetical protein MCCL_1315 [Macrococcus caseolyticus JCSC5402] gi|222120687|dbj|BAH18022.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 247 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 15/228 (6%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 +P Y+ D+ PYG +++ + L +++K+ +L VIACNTA + L Sbjct: 4 LPNETIYYLGDEARCPYGPRTQEEVRRFTIQLAEFLINKHIKML-VIACNTATAAALESL 62 Query: 96 RSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154 R TF ++ +G + P + A T++ + +L T T+R H+Y + H+ Sbjct: 63 RETF-NIPIIGVIEPGARTAIMTTENNHVLVLGTEGTIRS-------HAYKEKIHMINPH 114 Query: 155 SMILASRVEEYACGIKIK----EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + E+ ++ + E E + I E + ++D ++L CTHYPL+ Sbjct: 115 IEVAGKSCPEFVPLVESRRYKDEAESMRIISRVLQEFKTHKSDTVILGCTHYPLLQEYIN 174 Query: 211 QLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFLSGKPD 257 + + + AR LL N H T+ H F++G + Sbjct: 175 RFFDNQKKVISSGLETAREVSALLTFRNIHVTQPATVAHRFFVNGDAE 222 >gi|261839621|gb|ACX99386.1| glutamate racemase [Helicobacter pylori 52] Length = 255 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQDYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEHFTLSTPPLLIHSGDAIVEYLHQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|216264433|ref|ZP_03436425.1| glutamate racemase [Borrelia burgdorferi 156a] gi|223889211|ref|ZP_03623800.1| glutamate racemase [Borrelia burgdorferi 64b] gi|225549776|ref|ZP_03770741.1| glutamate racemase [Borrelia burgdorferi 118a] gi|215980906|gb|EEC21713.1| glutamate racemase [Borrelia burgdorferi 156a] gi|223885460|gb|EEF56561.1| glutamate racemase [Borrelia burgdorferi 64b] gi|225369736|gb|EEG99184.1| glutamate racemase [Borrelia burgdorferi 118a] Length = 305 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 17/202 (8%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y + + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMENFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTS---NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +++T TL + N+ + + + LV+ + ++YA + + Sbjct: 156 LLIATNTTLESKFVKDQVNIHNDLIVKAAGELVNFVEYGENYKKYAL----------RCL 205 Query: 181 EGCFIEKEGKRTDVIVLACTHY 202 E E +++ L CTHY Sbjct: 206 EALKFEVVNTGREIVFLGCTHY 227 >gi|197693698|gb|ACH71518.1| glutamate racemase [Helicobacter pylori] gi|197693700|gb|ACH71519.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L V+ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 173 LPEVVILGCTHFPLIAH 189 >gi|297583708|ref|YP_003699488.1| glutamate racemase [Bacillus selenitireducens MLS10] gi|297142165|gb|ADH98922.1| glutamate racemase [Bacillus selenitireducens MLS10] Length = 280 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 13/227 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q I + DSG+GGL V+ ++ +P+ IY+ D PYG + + + + Sbjct: 1 MQRPIGVIDSGVGGLTVVSELMRQLPKEEIIYIGDTKRCPYGPRPAFEVAEYTWEMIDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFL--GAVPAIKQAAAYTQSGLISILS 127 + + +L VIACNTA ++ D+ R P + + GAV A+K T++ + ++ Sbjct: 61 MSRDIKLL-VIACNTASAVVLDDARQALDIPVIGVIHPGAVAALKA----TENLEVGVIG 115 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + S + + ++ L VE + +E K I Sbjct: 116 TEGTISSGAYYEELKSIHNDVKVVSLACPTLVPLVESN----RYTGEEAKAVIREALEPM 171 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYP+I + + + + + D AR LL Sbjct: 172 LDYPVDSLILGCTHYPMIEREIQDVVGEDIHVICSGDETARAVSTLL 218 >gi|268318989|ref|YP_003292645.1| hypothetical protein FI9785_498 [Lactobacillus johnsonii FI9785] gi|262397364|emb|CAX66378.1| murI [Lactobacillus johnsonii FI9785] Length = 266 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 38/246 (15%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ + Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117 + + FL S + + + CNTA ++ P + +G + + AAA Sbjct: 53 LTRDSVNFLLSKDVK-----IIIFGCNTATAAAMSTIQKEIP-LQIIGVIQSGALAAART 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE 175 T++ ++++ T AT+ HSY+ + I I +V E+A + E++ Sbjct: 107 TETKNVAVIGTKATVDS-------HSYLKE--IQYRDPEI---KVSEFAQPKLAPLAEED 154 Query: 176 IKKEIEGCFIEK-----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 ++I+ + + + D +VL CTHYPL+ + +D +D +A+ Sbjct: 155 PDEDIKNAVVSESLTPLKNADYDTLVLGCTHYPLLREEIVAVVGQDKKIVDPADQVAQYT 214 Query: 231 RCLLPR 236 +L R Sbjct: 215 YNVLRR 220 >gi|223984567|ref|ZP_03634697.1| hypothetical protein HOLDEFILI_01992 [Holdemania filiformis DSM 12042] gi|223963472|gb|EEF67854.1| hypothetical protein HOLDEFILI_01992 [Holdemania filiformis DSM 12042] Length = 244 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 15/216 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL +L K+R P+ F+Y+AD PYG+ D L+ L + L+K Sbjct: 2 IGVFDSGIGGLRLLDKLRQRWPQEDFVYLADQAHVPYGS-LDRDTLLDLLQLNLNWLEKQ 60 Query: 76 QPVLSVIACNTA-FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA T I R + + +Q A T+ I +L+TP T + Sbjct: 61 GADRIVVACNTASATGIARRYRGQAQIVEIISKT--CEQIPASTEK--ILVLATPFTAQS 116 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 ++ + Q + V LA + E+ C + E +K E+ + G D+ Sbjct: 117 HRYQQVLARQLPQAEVKEVGLSCLAFMI-EHLCPKQEIETYLKGELNA---YRNG--FDL 170 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 VLACTH+P F ++ P L +S+SIA A Sbjct: 171 AVLACTHFPFARDQFAKVLGIP---LIDSESIALEA 203 >gi|167648830|ref|YP_001686493.1| glutamate racemase [Caulobacter sp. K31] gi|189030358|sp|B0T549|MURI_CAUSK RecName: Full=Glutamate racemase gi|167351260|gb|ABZ73995.1| Glutamate racemase [Caulobacter sp. K31] Length = 283 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 26/223 (11%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GGL V + + +P+ FIY+AD PYG + + D Sbjct: 2 SIGVFDSGVGGLTVHRALVNRLPQADFIYLADQANAPYGGRPGEEIVALTRAGCERLFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-------------------PSMAFLGAVP----AI 111 L V+ACNTA + L+ T+ P++ +P A Sbjct: 62 GA-SLVVLACNTASAIALRRLQQTWLPGYRKALGRPINVLGIIVPTIEAATGLPWEHEAE 120 Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 ++ Q ++ + STP T I + LA +E A +++ Sbjct: 121 RRGEKVEQLDILGVFSTPGTAASRVYEIEIDKRRQDVAVFSEPCPNLARMIEAGAGAVEL 180 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 E+++ ++ + G+ D +L CTHY +I +FR P Sbjct: 181 A-TEVERHVQ-QLKTRIGRYPDRAILGCTHYEIIADLFRAALP 221 >gi|197693686|gb|ACH71512.1| glutamate racemase [Helicobacter pylori] gi|197693688|gb|ACH71513.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LEILPEVVILGCTHFPLIAH 189 >gi|227888697|ref|ZP_04006502.1| glutamate racemase [Lactobacillus johnsonii ATCC 33200] gi|227850724|gb|EEJ60810.1| glutamate racemase [Lactobacillus johnsonii ATCC 33200] Length = 266 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 38/246 (15%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ + Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117 + + FL S + + + CNTA + ++ P + +G V + AAA Sbjct: 53 LTRDSVNFLLSKDVK-----IIIFGCNTATAVAMSTIQKEIP-LQIIGVVQSGALAAART 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIK 170 T++ ++++ T AT+ HSY+ + + + LA EE Sbjct: 107 TETKNVAVIGTKATVDS-------HSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----D 154 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 ED + + D +VL CTHYPL+ + +D +D +A+ Sbjct: 155 PDEDTKNAVVSESLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYT 214 Query: 231 RCLLPR 236 +L R Sbjct: 215 YNVLRR 220 >gi|37811807|gb|AAR03882.1| glutamate racemase [Helicobacter pylori] Length = 255 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 32/248 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQIFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234 +V++L CTH+PLI LS P V++L ++ + A C Sbjct: 173 LPEVVILGCTHFPLIARQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA-CAF 231 Query: 235 PRINTHQT 242 P++ H + Sbjct: 232 PKVEFHAS 239 >gi|119715551|ref|YP_922516.1| glutamate racemase [Nocardioides sp. JS614] gi|119536212|gb|ABL80829.1| glutamate racemase [Nocardioides sp. JS614] Length = 282 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 6/194 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL V + + +P +YV D PYG +++ + ++++ Sbjct: 21 IGIFDSGFGGLTVARSVIDQLPHESIVYVGDTARQPYGPKPIGEVREYALECLDHLVERG 80 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACN+A + + R + PA ++A A +++G I ++ T AT Sbjct: 81 VKAL-VIACNSASAAMLRDARERYDVPVVEVIYPATRRAVAASRTGRIGVICTRATAESM 139 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + ++ + H+ LV+ R ++ DE+ + D + Sbjct: 140 AYDD---AFAAAPHVRLVTQP--CPRFVDFVEAGVTSGDELISVAHEYLDPLISEGVDTL 194 Query: 196 VLACTHYPLIVHVF 209 +L CTHYPL+ V Sbjct: 195 ILGCTHYPLLTGVI 208 >gi|37811906|gb|AAR03971.1| glutamate racemase [Helicobacter pylori] Length = 255 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 30/247 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIA---------RRARCLLP 235 +VI+L CTH+PLI P P + + D+I ++ C P Sbjct: 173 LPEVIILGCTHFPLIAQKIEGYFMEHFALPTPPLLIHSGDAIVGYLQQKYALKKNACAFP 232 Query: 236 RINTHQT 242 ++ H + Sbjct: 233 KVEFHAS 239 >gi|315079376|gb|EFT51374.1| glutamate racemase [Propionibacterium acnes HL053PA2] Length = 284 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 112/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + + Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDRL 68 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + L +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 69 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESG 229 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 D FL+ + + RRLM+GF Sbjct: 230 LLHPHPRDSSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|229822946|ref|ZP_04449016.1| hypothetical protein GCWU000282_00238 [Catonella morbi ATCC 51271] gi|229787759|gb|EEP23873.1| hypothetical protein GCWU000282_00238 [Catonella morbi ATCC 51271] Length = 286 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 7/189 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I DSG GGL V+++ +P IY+ D+ PYG +K + L +L K Sbjct: 9 IGFIDSGYGGLTVVKQSLKQLPNESIIYLGDNARCPYGPRSMEEVKDYIWQLTRFLLKKG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 +L VIACNT +E+R T + +G + P + A T++ I ++ T T+ Sbjct: 69 IKML-VIACNTGTAAALEEIRQTL-DIPVVGVIHPGSRAAIERTENNHIGVIGTQGTIAS 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 ++ + V+ VE++ + ++++ + ++ G D Sbjct: 127 NLYERVMKDKADYLQVTSVACPSFVQLVEDHQLNSPLAWQQVRESLSA--FDQTG--IDT 182 Query: 195 IVLACTHYP 203 +V+ CTHYP Sbjct: 183 LVMGCTHYP 191 >gi|197693734|gb|ACH71536.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LEILPEVVILGCTHFPLIAH 189 >gi|297197689|ref|ZP_06915086.1| glutamate racemase [Streptomyces sviceus ATCC 29083] gi|297146828|gb|EFH28366.1| glutamate racemase [Streptomyces sviceus ATCC 29083] Length = 262 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 75/196 (38%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + D G P+G + R + L + Sbjct: 3 IALLDSGIGLLAATAAVRRLRPDADLVLSLDPDGMPWGPRTPDDIIGRALTLAE-AAAAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 P +I CNTA LR+ P + +G VPAIK AA + G +I +TPAT Sbjct: 62 GPEALIIGCNTATVHALTALRARLEPDLPVIGTVPAIKPAA--SAGGPFAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y L+ + V LA VE + + Sbjct: 120 PYQRGLLAEFADGVPATEVPCHGLAEAVEHADEAAIDAAVAAAAAL-------TPEDVTT 172 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 173 VVLGCTHYELVAERIR 188 >gi|319892140|ref|YP_004149015.1| Glutamate racemase [Staphylococcus pseudintermedius HKU10-03] gi|317161836|gb|ADV05379.1| Glutamate racemase [Staphylococcus pseudintermedius HKU10-03] gi|323464749|gb|ADX76902.1| glutamate racemase [Staphylococcus pseudintermedius ED99] Length = 265 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 8/196 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG + +KK ++ Sbjct: 1 MDRPIGVMDSGVGGLTVAKEIMRQLPNETIYYLGDVARCPYGPRDQEEVKK-FTIEMANY 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + VIACNTA + + L+ + +G + P + A T++ + +L T Sbjct: 60 LVQYDIKMLVIACNTATAVALEPLQEQL-KIPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189 T++ I ++ V+ VEE +K K+ I I Sbjct: 119 TIKSEAYRTHIKKINPHVDVYGVACPGFVPLVEE----MKYKDPTITNIVIHQTLKSWRQ 174 Query: 190 KRTDVIVLACTHYPLI 205 D ++L CTHYPL+ Sbjct: 175 TEADTVILGCTHYPLL 190 >gi|86152334|ref|ZP_01070545.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 260.94] gi|85840823|gb|EAQ58074.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 260.94] Length = 247 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++ Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121 Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y L+ +I+ +++ + VEE GI + D ++ +E F K Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218 D ++LACTH+PL+ R LS + D Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196 >gi|319779418|ref|YP_004130331.1| Glutamate racemase [Taylorella equigenitalis MCE9] gi|317109442|gb|ADU92188.1| Glutamate racemase [Taylorella equigenitalis MCE9] Length = 267 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 18/213 (8%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 KKL I +FD+GIG + +R P+ IY AD FPY W+ K + Sbjct: 5 KKLVKPIAVFDAGIGSYAWARAIREKFPKQDIIYFADRANFPYA-WKTKDELKACIKGAI 63 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI-----S 124 + L L V+ N + E++ S+ +G++P I A +++G I Sbjct: 64 ECLADMGACLVVVTSNAPSITVVSEIKEEC-SVPVMGSIPPIASGVATSKTGEIINLGVK 122 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 ILS+ R + S +HLV++ L + VE G I E E E F Sbjct: 123 ILSSLPEFRF-----FVESISDDAKVHLVNAEDLVTTVE---SGQFITEHEKTVEQVKKF 174 Query: 185 IEKEGKR---TDVIVLACTHYPLIVHVFRQLSP 214 ++ ++ DV L+ TH IV +F++ +P Sbjct: 175 MDDVRQKYPNADVCTLSSTHLTWIVDIFQKAAP 207 >gi|127663934|gb|ABO28649.1| glutamate recemase [Helicobacter pylori] Length = 255 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 30/247 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIA---------RRARCLLP 235 +VI+L CTH+PLI P P + + D+I R+ C P Sbjct: 173 LPEVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQKYALRKNACTFP 232 Query: 236 RINTHQT 242 ++ H + Sbjct: 233 KVEFHAS 239 >gi|229114438|ref|ZP_04243856.1| Glutamate racemase [Bacillus cereus Rock1-3] gi|228669117|gb|EEL24541.1| Glutamate racemase [Bacillus cereus Rock1-3] Length = 275 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/242 (21%), Positives = 102/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ E ED + ++++ + + Sbjct: 128 NMYEKALHELDTYLEVHSHACPTLATVAENQL------EDTAYVTQQVKQALLPLTKEDI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 241 Query: 253 SG 254 +G Sbjct: 242 TG 243 >gi|57238663|ref|YP_179794.1| glutamate racemase [Campylobacter jejuni RM1221] gi|86152895|ref|ZP_01071100.1| glutamate racemase [Campylobacter jejuni subsp. jejuni HB93-13] gi|57167467|gb|AAW36246.1| glutamate racemase [Campylobacter jejuni RM1221] gi|85843780|gb|EAQ60990.1| glutamate racemase [Campylobacter jejuni subsp. jejuni HB93-13] gi|315059102|gb|ADT73431.1| Glutamate racemase [Campylobacter jejuni subsp. jejuni S3] Length = 247 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++ Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121 Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y L+ +I+ +++ + VEE GI + D ++ +E F K Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218 D ++LACTH+PL+ R LS + D Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196 >gi|147677122|ref|YP_001211337.1| glutamate racemase [Pelotomaculum thermopropionicum SI] gi|146273219|dbj|BAF58968.1| glutamate racemase [Pelotomaculum thermopropionicum SI] Length = 266 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 17/259 (6%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I +FDSGIGGL V ++ +P IY D PYG+ L R D L+ Sbjct: 5 GAIGLFDSGIGGLTVAVEVYRQLPAESTIYFGDTAHVPYGSRNPGEL-YRFASRIVDFLE 63 Query: 74 KYQPVLSVIACNTAFTL---IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + ACNT+ +L I E R P + + P + A T + I +++T A Sbjct: 64 GEGAKYIIFACNTSSSLSLPILQE-RKAVPMIGLI--KPGVAAALQKTVNRRIGVIATEA 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + ++ L VE G + +++ + F KE Sbjct: 121 TVKSGAYERELKRQDENVQVFCQAASRLVPLVEAGETGTPAAAEAVREYL---FPLKEAG 177 Query: 191 RTDVIVLACTHYPLIVH-VFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP + + ++ P V +D + + A L R+ +H Sbjct: 178 -IDTLILGCTHYPFLKPLIAGEMGPG-VQLVDPAAATVEEAGKELQRLGLAAGGPAVPEH 235 Query: 249 ALFLSGKPDI---AMRRLM 264 +SG P A RR + Sbjct: 236 RFVVSGDPAAFQKAARRFL 254 >gi|197693658|gb|ACH71498.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE G ++ E ++ I Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKILP 174 Query: 188 EGKRTDVIVLACTHYPLIVH 207 E VI+L CTH+PLI Sbjct: 175 E-----VIILGCTHFPLIAQ 189 >gi|157415872|ref|YP_001483128.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81116] gi|157386836|gb|ABV53151.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81116] gi|307748509|gb|ADN91779.1| Glutamate racemase [Campylobacter jejuni subsp. jejuni M1] gi|315931379|gb|EFV10348.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 327] Length = 247 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++ Sbjct: 62 QIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121 Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y L+ +I+ +++ + VEE GI + D ++ +E F K Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218 D ++LACTH+PL+ R LS + D Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196 >gi|329766264|ref|ZP_08257822.1| glutamate racemase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137323|gb|EGG41601.1| glutamate racemase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 253 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 22/215 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+G L V+++++ + + IY AD FPYG +KK + + I + + Sbjct: 4 IAIFDSGLGSLSVIKQIQKQI-KCDIIYFADSKNFPYGKKSIKEIKKITLQTITTIQNLF 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P L ++ NT L T S + +P + +A T+S I+IL+T + ++ Sbjct: 63 KPDLIIVGSNTL------SLTLTSHSKNIIIVLPPLSEAQKITKSKSIAILATESIVK-- 114 Query: 136 YTSNLIHSYVSQCHIHLVSSM-ILASRVEEYACGIKIKEDE------IKKEIEGCFIEKE 188 S L+ SY++ I+ + I AS + E K D+ IKK ++ I Sbjct: 115 --SKLLDSYINLFQINNTKIIKINASPLVELVESGKFYSDQKYCKVIIKKTLDYKLIRNN 172 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 DV+ L+ TH P ++ +++ P V +LD S Sbjct: 173 ---VDVVTLSSTHLPFLLKFLKEIFPH-VTFLDPS 203 >gi|300741330|ref|ZP_07071351.1| glutamate racemase [Rothia dentocariosa M567] gi|300380515|gb|EFJ77077.1| glutamate racemase [Rothia dentocariosa M567] Length = 346 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 11/233 (4%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I +FDSG+GGL V + + +P IYV D PYG + ++ + Sbjct: 23 PAGPTSSAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 82 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGL 122 + +++D +L VIACNTA + + R + + + PA ++A A T++ Sbjct: 83 IMDELVDSGVKML-VIACNTASAAVLRDARERYTRHYGIPVIEVIQPAARRALAATRNRK 141 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +++T AT+ TS + +V S+ VE G+ E+ + E Sbjct: 142 IGVIATEATV----TSRAYEDTFAIAPNLMVQSVACPRFVEFVEKGV-TSGPELLRTAEE 196 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLL 234 + D +VL CTHYPL+ + + V + ++D A+ R LL Sbjct: 197 YLQPLKDSGVDTLVLGCTHYPLLTGIISYIMGEDVTLVSSADETAKDVYRALL 249 >gi|237751612|ref|ZP_04582092.1| glutamate racemase [Helicobacter bilis ATCC 43879] gi|229372978|gb|EEO23369.1| glutamate racemase [Helicobacter bilis ATCC 43879] Length = 258 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 18/224 (8%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N+I IFDSG GGL VL+ + + H +Y D PYGN +D +R + Sbjct: 5 NNIGIFDSGAGGLTVLKSLIEEVGFNHIVYYGDTARVPYGN-KDTETIRRFSLEALEFFS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL-----ISILST 128 + L V+ACNTA ++ + +G + + AA TQ + I +++T Sbjct: 64 NFGLDLLVVACNTASAHALHAMQEC-SKIPIIGVIES--GIAALTQQHIAKDKHILVIAT 120 Query: 129 PATLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ Y +L + + +I +++ + S VEE+ ++ + ++ Sbjct: 121 EATIKSDNYAKSLRN--LGYTNITSLATNLFVSLVEEHVFSGEVVDSVLRHYFPPTL--- 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 + DV++L CTH+PL++ ++ V ++ + ++IA R Sbjct: 176 ---KPDVVILGCTHFPLLLLPMQKYFGSDVKFIHSGEAIACYVR 216 >gi|239618385|ref|YP_002941707.1| glutamate racemase [Kosmotoga olearia TBF 19.5.1] gi|239507216|gb|ACR80703.1| glutamate racemase [Kosmotoga olearia TBF 19.5.1] Length = 277 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 20/247 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPE-YHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSGIGG+ VL+++ +P F Y D PYG+ +KK + +F D Sbjct: 7 IGIFDSGIGGITVLRELMKSVPTGVRFHYFGDTARVPYGSKPPSEIKKYVHQVF-DFFRS 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 V ACNT+ +++ E + + P + + V A+K S ++I+ T T Sbjct: 66 LSVEAIVTACNTSDSILSKEEKKSLEVPFFSIIDPVTEALKNDLPINSS--VAIIGTRNT 123 Query: 132 LRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 ++R+ Y LI S + C I + + VEE + E ++ + G K Sbjct: 124 IKRSLYLKKLIGSD-NICRISQKACPLFVPLVEEGVWEGTLAETIVRYYLRGI------K 176 Query: 191 R--TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 R D ++L CTHYP ++ + V +D ++ +AR + I Q V Sbjct: 177 RFAPDYLILGCTHYPFLLKPIKTYLGEDVKVVDPAEYVAREFKAW---IENQQNDVDSTV 233 Query: 249 ALFLSGK 255 +++G+ Sbjct: 234 VFYVTGE 240 >gi|229154555|ref|ZP_04282672.1| Glutamate racemase [Bacillus cereus ATCC 4342] gi|228628953|gb|EEK85663.1| Glutamate racemase [Bacillus cereus ATCC 4342] Length = 284 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ ++ + + L ++ Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVLEMV-EFLKQF 76 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 77 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 135 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192 +H + +H + LA+ VE ED + ++++ + + Sbjct: 136 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTEEDI 189 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 190 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 249 Query: 253 SG 254 +G Sbjct: 250 TG 251 >gi|197693566|gb|ACH71452.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|121612969|ref|YP_001001295.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176] gi|167006189|ref|ZP_02271947.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176] gi|87249921|gb|EAQ72880.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176] Length = 247 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 12/193 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++ Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121 Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y L+ +I+ +++ + VEE GI + D ++ +E F K Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLI 205 D ++LACTH+PL+ Sbjct: 174 DALILACTHFPLL 186 >gi|197693762|gb|ACH71550.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI H Sbjct: 173 LPEVIILGCTHFPLIAH 189 >gi|197693584|gb|ACH71461.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + S +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVSLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693764|gb|ACH71551.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI H Sbjct: 173 LPEVIILGCTHFPLIAH 189 >gi|197693594|gb|ACH71466.1| glutamate racemase [Helicobacter pylori] gi|197693596|gb|ACH71467.1| glutamate racemase [Helicobacter pylori] gi|197693822|gb|ACH71580.1| glutamate racemase [Helicobacter pylori] gi|197693824|gb|ACH71581.1| glutamate racemase [Helicobacter pylori] gi|197693826|gb|ACH71582.1| glutamate racemase [Helicobacter pylori] gi|197693828|gb|ACH71583.1| glutamate racemase [Helicobacter pylori] gi|197693830|gb|ACH71584.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI H Sbjct: 173 LPEVIILGCTHFPLIAH 189 >gi|82750757|ref|YP_416498.1| glutamate racemase [Staphylococcus aureus RF122] gi|123549008|sp|Q2YXC5|MURI_STAAB RecName: Full=Glutamate racemase gi|82656288|emb|CAI80702.1| glutamate racemase [Staphylococcus aureus RF122] Length = 266 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/246 (22%), Positives = 103/246 (41%), Gaps = 9/246 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 MG-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189 T++ I +H V+ VE+ ++ + I + +++ Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQ----MRYSDPTITSIVIHQTLKRWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248 +D ++L CTHYPL+ + + AR LL N H + DH Sbjct: 175 SESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDH 234 Query: 249 ALFLSG 254 F +G Sbjct: 235 RFFATG 240 >gi|282855013|ref|ZP_06264345.1| glutamate racemase [Propionibacterium acnes J139] gi|282581601|gb|EFB86986.1| glutamate racemase [Propionibacterium acnes J139] gi|314982112|gb|EFT26205.1| glutamate racemase [Propionibacterium acnes HL110PA3] gi|315090351|gb|EFT62327.1| glutamate racemase [Propionibacterium acnes HL110PA4] Length = 284 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTMADVRRYALQCLDR 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEA------ 181 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESG 229 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 + + FL+ + + RRLM+GF Sbjct: 230 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|228926020|ref|ZP_04089101.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833732|gb|EEM79288.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 265 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 11/240 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 60 KALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRTDV 194 +H + +H + LA+ VE ED + ++++ + + D Sbjct: 119 YEKALHELDTYLKVHSHACPNLATVVENRL------EDTAYVTQQVKQALLPLTKEDIDT 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 173 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTG 232 >gi|197693624|gb|ACH71481.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 16/204 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTPAT 131 Q L ++ACNTA L +E++ F + +G + AIKQ ++ I +L T AT Sbjct: 62 QIELLIVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ N + +HL +S+ + +EE I E E+ + + Sbjct: 120 IQSNAYDNALKQQGYLNVVHLATSLFV-PLIEE-----NILEGELLETCMRYYFTPLKIL 173 Query: 192 TDVIVLACTHYPLIVHVFRQLSPW 215 +V++L CTH+PLI RQ+ + Sbjct: 174 PEVVILGCTHFPLIA---RQIEGY 194 >gi|197693804|gb|ACH71571.1| glutamate racemase [Helicobacter pylori] gi|197693836|gb|ACH71587.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVA-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 VI+L CTH+PLI RQ+ + Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194 >gi|116333824|ref|YP_795351.1| glutamate racemase [Lactobacillus brevis ATCC 367] gi|122269489|sp|Q03R52|MURI_LACBA RecName: Full=Glutamate racemase gi|116099171|gb|ABJ64320.1| Glutamate racemase [Lactobacillus brevis ATCC 367] Length = 276 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/228 (22%), Positives = 102/228 (44%), Gaps = 13/228 (5%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL--F 68 +QN I + DSG+GGL VL++++ L+P + +++ D PYG ++ + MF Sbjct: 1 MQNDPIGLMDSGVGGLTVLKEVQRLLPTENTVFLGDQARLPYG---PRSVAEVTMFTKQI 57 Query: 69 SDILDKYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 + L + + + VIACNTA ++ T P + +G + P + A T++ I ++ Sbjct: 58 AQFLRQQAGIKALVIACNTATAAALTTMQQTLP-IPVIGVIAPGAQAAVQTTRNHRIGVI 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T++ I + I V+ + + E+ + + + Sbjct: 117 ATAGTVKSDQYRRDILAAAPNSQIFSVACPEMVTLAEQN----DLTTTHARSVVAANLAS 172 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 K+ D +V+ CTH+PL+ + V +D + A + +L Sbjct: 173 LMDKKIDTLVMGCTHFPLLRSAIQHAVGSQVTLVDPGLATAEQTAAIL 220 >gi|259502881|ref|ZP_05745783.1| glutamate racemase [Lactobacillus antri DSM 16041] gi|259169132|gb|EEW53627.1| glutamate racemase [Lactobacillus antri DSM 16041] Length = 257 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 6/187 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL VL+ +R +P+ ++V D FPYG + A ++L L ++ Sbjct: 1 MDSGLGGLSVLRVLRQELPDESLLFVGDQGHFPYGT-KTQAEVRQLALAIGRFLVRHDAK 59 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 L V+ACNTA T + +G + AA T I ++ T +T++ Sbjct: 60 LMVVACNTA-TGAALPALQAALPIPVVGVIRPGATAALATNPRTIGVIGTDSTIKNGAYE 118 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 +H + + L + VE G + + K ++ F + + ++L Sbjct: 119 RTLHELQPAVKVVSQPAQPLVAIVEHGQTGTPAAQRAVDKVLQ-PFASQP---VENLILG 174 Query: 199 CTHYPLI 205 CTH+P + Sbjct: 175 CTHFPFL 181 >gi|256824843|ref|YP_003148803.1| glutamate racemase [Kytococcus sedentarius DSM 20547] gi|256688236|gb|ACV06038.1| glutamate racemase [Kytococcus sedentarius DSM 20547] Length = 285 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/243 (24%), Positives = 99/243 (40%), Gaps = 9/243 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+ D PYG +++ + ++D+ Sbjct: 6 IGIFDSGLGGLTVARAVIDHLPHESTVYLGDTHHAPYGPRPIAEVRRLALDSLDALMDRG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACN+A + + R + PA ++AA T++G + ++ST AT Sbjct: 66 VKAL-VIACNSASAAVLHDARERYSVPVIEVIRPAARRAAGITRTGAVGVISTQAT---- 120 Query: 136 YTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +TS ++ + + L S R + I E+ + D Sbjct: 121 HTSGAYRDAFAAVPSVQLRSQPC--PRFVHFVESGTISGPEVFAAATEYLQPLKEAGVDT 178 Query: 195 IVLACTHYPLIVHVFR-QLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L CTHYPL+ V ++ P ++ A R L R H + Sbjct: 179 LILGCTHYPLLRGVIAYEMGPEVSLVSSAEETAAELLRTLADRGELAPDATVPTHEFLTT 238 Query: 254 GKP 256 G P Sbjct: 239 GDP 241 >gi|42518578|ref|NP_964508.1| glutamate racemase [Lactobacillus johnsonii NCC 533] gi|81668196|sp|Q74KU5|MURI_LACJO RecName: Full=Glutamate racemase gi|41582863|gb|AAS08474.1| glutamate racemase [Lactobacillus johnsonii NCC 533] Length = 266 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 38/246 (15%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ + Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117 + + FL S + + + CNTA + ++ P + +G V + AAA Sbjct: 53 LTRDSVNFLLSKDVK-----IIIFGCNTATAVAMATIQKEIP-LQIIGVVQSGALAAART 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIK 170 T++ ++++ T AT+ HSY+ + + + LA EE Sbjct: 107 TETKNVAVIGTKATVAS-------HSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----D 154 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 ED + + D +VL CTHYPL+ + +D +D +A+ Sbjct: 155 PDEDTKNAVVSESLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYT 214 Query: 231 RCLLPR 236 +L R Sbjct: 215 YNVLRR 220 >gi|1346607|sp|P48797|MURI_LACBR RecName: Full=Glutamate racemase gi|468450|dbj|BAA06106.1| glutamate racemase [Lactobacillus brevis] Length = 276 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 24/257 (9%) Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL--F 68 +QN I + DSG+GGL VL++++ L+P + +++ D PYG ++ + MF Sbjct: 1 MQNDPIGLMDSGVGGLTVLKEVQRLLPTENTVFLGDQARLPYG---PRSVAEVTMFTKQI 57 Query: 69 SDILDKYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 + L + + + VIACNTA ++ T P + +G + P + A T++ I ++ Sbjct: 58 AQFLRQQARIKALVIACNTATAAALTTMQQTLP-IPVIGVIAPGAQAAVQTTRNHRIGVI 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T++ I + I V+ + + E+ + + + Sbjct: 117 ATAGTVKSDQYRRDILAAAPNSQIFSVACPEMVTLAEQN----DLTTTHAQSVVAANLAS 172 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR------RARCLLPRINTH 240 K+ D +V+ CTH+PL+ + V +D + A + R LL T Sbjct: 173 LMDKKIDTLVMGCTHFPLLRSAIQHAVGSQVTLVDPGLATAEQTVAILKTRGLLNSATTR 232 Query: 241 QTRVFDDHALFLSGKPD 257 T F F +G+ D Sbjct: 233 GTAQF-----FTTGETD 244 >gi|227498833|ref|ZP_03928973.1| glutamate racemase [Acidaminococcus sp. D21] gi|226904285|gb|EEH90203.1| glutamate racemase [Acidaminococcus sp. D21] Length = 274 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 6/190 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL VL+ ++ MP FI++ D PYG+ + +R + +D L + Sbjct: 15 IGVIDSGVGGLTVLKWLQKKMPHEQFIFIGDTARTPYGDRAREEI-QRFVKEMTDCLARR 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNT L D +R+ + +G T + + +T T+ Sbjct: 74 KIKELVVACNTITVLGLDTIRNGY-DFDVIGMAKGASNIREVTHNNKVGFFATDFTVSTG 132 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 I + + L +E G ++ IK+ ++ + D + Sbjct: 133 AHKREIERLDPGVEVFGLGCPKLVPLIESEKFGRPEMQEAIKEYVDAMKVHG----IDTL 188 Query: 196 VLACTHYPLI 205 +L+CTHYP + Sbjct: 189 LLSCTHYPFL 198 >gi|197693694|gb|ACH71516.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYGNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LEILPEVVILGCTHFPLIAH 189 >gi|314984207|gb|EFT28299.1| glutamate racemase [Propionibacterium acnes HL005PA1] Length = 284 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 112/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + + Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDRL 68 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + L +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 69 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + + +S AR + L+ Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGAAPALISSSQQCARASYSLMAESG 229 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 + D FL+ + + RRLM+GF Sbjct: 230 LLHSHPRDSSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|228938111|ref|ZP_04100731.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970986|ref|ZP_04131623.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977589|ref|ZP_04137981.1| Glutamate racemase [Bacillus thuringiensis Bt407] gi|228782233|gb|EEM30419.1| Glutamate racemase [Bacillus thuringiensis Bt407] gi|228788795|gb|EEM36737.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821596|gb|EEM67601.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938613|gb|AEA14509.1| glutamate racemase [Bacillus thuringiensis serovar chinensis CT-43] Length = 276 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 7/240 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++ Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA L+ S+ +G + P + A T+ I ++ T T++ Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +H + +H + LA+ VE I ++K+ + + D Sbjct: 128 NMYEKALHELDTYLEVHSHACPTLATVVENRLEDIAYVTQQVKQ----ALLPLTKEDIDT 183 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 184 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 243 >gi|197693792|gb|ACH71565.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 24/208 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFAP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPW 215 VI+L CTH+PLI RQ+ + Sbjct: 170 LKILPKVIILGCTHFPLIA---RQIEGY 194 >gi|197693668|gb|ACH71503.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LKILPEVVILGCTHFPLIAH 189 >gi|197693676|gb|ACH71507.1| glutamate racemase [Helicobacter pylori] gi|197693678|gb|ACH71508.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LKILPEVVILGCTHFPLIAH 189 >gi|197693576|gb|ACH71457.1| glutamate racemase [Helicobacter pylori] gi|197693766|gb|ACH71552.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTPAT 131 Q L V+ACNTA L +E++ F + +G + AIKQ ++ I +L T AT Sbjct: 62 QIKLLVVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKAT 119 Query: 132 LRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 120 IQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLE 171 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPW 215 +VI+L CTH+PLI RQ+ + Sbjct: 172 ILPEVIILGCTHFPLIA---RQIEGY 194 >gi|315586766|gb|ADU41147.1| glutamate racemase [Helicobacter pylori 35A] Length = 255 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L E++ S P + + ++ AI Q ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAINQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT+R N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIRSHAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI H LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|78212667|ref|YP_381446.1| glutamate racemase [Synechococcus sp. CC9605] gi|123578331|sp|Q3AKJ1|MURI_SYNSC RecName: Full=Glutamate racemase gi|78197126|gb|ABB34891.1| Glutamate racemase [Synechococcus sp. CC9605] Length = 265 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 19/189 (10%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSG+GGL VL+++ +Y+ D PYGN + +++ + + D+ Sbjct: 9 FDSGLGGLTVLRRVLERHGSVPCVYLGDTARVPYGNRQPDDIRRIAAEVVGWLRDQKVST 68 Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 + V+ACNT L +D + ++ P + +GA AAA ++ + +L+TPAT+ Sbjct: 69 V-VMACNTTNALARDVADGQAGAPVIGLIGA------AAAMVETRRVGVLATPATV---- 117 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKRTD 193 S+ + + H SM++ + I+ + D++++ + + Sbjct: 118 ASSAYRASIEALH---PGSMVIEQACPAFVPLIESGDMNSDDLRRAAQAYLEPLLAASVE 174 Query: 194 VIVLACTHY 202 IVL CTHY Sbjct: 175 SIVLGCTHY 183 >gi|197693558|gb|ACH71448.1| glutamate racemase [Helicobacter pylori] gi|197693586|gb|ACH71462.1| glutamate racemase [Helicobacter pylori] gi|197693614|gb|ACH71476.1| glutamate racemase [Helicobacter pylori] gi|197693616|gb|ACH71477.1| glutamate racemase [Helicobacter pylori] gi|197693620|gb|ACH71479.1| glutamate racemase [Helicobacter pylori] gi|197693768|gb|ACH71553.1| glutamate racemase [Helicobacter pylori] gi|197693770|gb|ACH71554.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTPAT 131 Q L V+ACNTA L +E++ F + +G + AIKQ ++ I +L T AT Sbjct: 62 QIKLLVVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKAT 119 Query: 132 LRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 120 IQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLK 171 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPW 215 +VI+L CTH+PLI RQ+ + Sbjct: 172 ILPEVIILGCTHFPLIA---RQIEGY 194 >gi|197693702|gb|ACH71520.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LEILPEVVILGCTHFPLIAH 189 >gi|283957038|ref|ZP_06374510.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 1336] gi|283791539|gb|EFC30336.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 1336] Length = 247 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 15/206 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Q + +IACNTA D L++ FP + A A + ++ I +++T AT++ Sbjct: 62 QIDMLIIACNTASAYALDALKAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121 Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y L+ + +I+ +++ + VEE GI + D ++ +E F K Sbjct: 122 SEEYQKRLL--FQGYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218 D ++LACTH+PL+ R LS + D Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196 >gi|127663966|gb|ABO28671.1| glutamate recemase [Helicobacter pylori] Length = 255 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 30/247 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIA---------RRARCLLP 235 +VI+L CTH+PLI P P + + D+I R C P Sbjct: 173 LPEVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQKYSLRENACTFP 232 Query: 236 RINTHQT 242 ++ H + Sbjct: 233 KVEFHAS 239 >gi|197693684|gb|ACH71511.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LEILPEVVILGCTHFPLIAH 189 >gi|329666855|gb|AEB92803.1| glutamate racemase [Lactobacillus johnsonii DPC 6026] Length = 266 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 38/246 (15%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ + Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117 + + FL S + + + CNTA + ++ P + +G V + AAA Sbjct: 53 LTRDSVNFLLSKDVK-----IIIFGCNTATAVAMATIQKEIP-LQIIGVVQSGALAAART 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIK 170 T++ ++++ T AT+ HSY+ + + + LA EE Sbjct: 107 TETKNVAVIGTKATVAS-------HSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----D 154 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 ED + + D +VL CTHYPL+ + +D +D +A+ Sbjct: 155 PDEDTKSAVVSESLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYT 214 Query: 231 RCLLPR 236 +L R Sbjct: 215 YNVLRR 220 >gi|197693622|gb|ACH71480.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|295691544|ref|YP_003595237.1| glutamate racemase [Caulobacter segnis ATCC 21756] gi|295433447|gb|ADG12619.1| glutamate racemase [Caulobacter segnis ATCC 21756] Length = 282 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 108/275 (39%), Gaps = 27/275 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P+ F Y+AD PYG + + D+ Sbjct: 2 IGVFDSGVGGLTVHRALVQRLPQADFTYLADQANAPYGVRTGEDIVALTKAGCEHLFDRG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PS--------MAFLG-AVPAIKQAAA--------- 116 V+ V+ACNTA + L+ T+ PS + LG VP I++A Sbjct: 62 ASVV-VLACNTASAIALRRLQQTWLPSYRKELGRPVNILGIIVPTIEKATGLPWEHEAER 120 Query: 117 ----YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 Q ++ + +T AT+R I + + L +E A + + Sbjct: 121 RGEKVEQLDILGVFATQATVRSRVYEIEIDKRKQDLAVFSEACPELVPLIEGDASAVDLA 180 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 + ++ +E + G+ D +VL CTHY +I +FR P + ++ A Sbjct: 181 K-AVQGHVE-ALKTRIGRYPDRVVLGCTHYEIIADIFRAALPAGTPLIQQPEATADALEL 238 Query: 233 LLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 L R + +G P L+Q F Sbjct: 239 YLERHPEYDPGQGGSRVFLTTGTPG-PQNGLVQSF 272 >gi|256396658|ref|YP_003118222.1| glutamate racemase [Catenulispora acidiphila DSM 44928] gi|256362884|gb|ACU76381.1| glutamate racemase [Catenulispora acidiphila DSM 44928] Length = 295 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 6/213 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL V++ + +P Y D PYG ++ + +++ Sbjct: 18 IGIFDSGFGGLTVVRALLDQLPHEAVSYFGDTARAPYGPRPIAQVRAYALECMDKLVESG 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +L VIACN+A + + R + PA++ A A T++ + ++ST +T R Sbjct: 78 VKML-VIACNSASGAVLRDARERYEIPVVEVIRPAVRLAVAATRNQHVGVISTRSTRR-- 134 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + ++ + I L + R E+ + +E+ K D + Sbjct: 135 -SMAYVDAFAAAPQIQLTTQEC--PRFVEFVEAGETAGEELLKVAREYLDPVAAAGVDTL 191 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +L CTHYPL+ V + V +++++ A+ Sbjct: 192 ILGCTHYPLLTGVISYVMGEDVILINSAEETAK 224 >gi|197693864|gb|ACH71601.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|116074593|ref|ZP_01471854.1| Glutamate racemase [Synechococcus sp. RS9916] gi|116067815|gb|EAU73568.1| Glutamate racemase [Synechococcus sp. RS9916] Length = 265 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 35/230 (15%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD--KY 75 +FDSG+GGL VL+ + +Y+ D PYG+ ++ + ++++ K+ Sbjct: 7 LFDSGVGGLTVLRSILQRHGPVPTVYLGDTARVPYGSRSPAEIRS----IAAEVVAWLKH 62 Query: 76 QPVLSVI-ACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Q V +V+ ACNT L +D E ++ P + +GA AAA + + +L+TPAT+ Sbjct: 63 QHVSTVVMACNTTNALARDVAEGQAGVPVVGLIGA------AAAMVRETRVGVLATPATV 116 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCF 184 S + + ++ + V + AC + E+++E G Sbjct: 117 ------------ASGAYRQSIEALNPGTLVVQQACPNFVPLIESGDLSSQELREEAMGYL 164 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + ++L CTHYPL+ + R L P V +D ++ +AR+ LL Sbjct: 165 TPLLEASVEAVILGCTHYPLLEPLLRSLLPPDVRLIDPAEGVARQLDALL 214 >gi|284047416|ref|YP_003397755.1| glutamate racemase [Acidaminococcus fermentans DSM 20731] gi|283951637|gb|ADB46440.1| glutamate racemase [Acidaminococcus fermentans DSM 20731] Length = 264 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 20/224 (8%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I + DSG+GGL VL+ ++ MP FI++ D PYGN ++ + + L+ Sbjct: 5 DPIGVIDSGVGGLTVLKWLQEKMPHERFIFIGDTARTPYGNRSREEIQG-FVGEMTAWLN 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNT L D +++ + + +G T++ + L+T T+ Sbjct: 64 RRNIKQLVVACNTITVLGTDVIKNGY-DFSVIGMKKGAHMVEGVTRNKKVGFLATDFTVA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVE-------EYACGIKIKEDEIKKEIEGCFIE 186 I + + +E E A IK D++K+ Sbjct: 123 SGAHKKEIQEMDPEIQVFGQGCPKFVPLIEGEQFGSPELAAAIKEYTDKLKE-------- 174 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 D ++L+CTHYP + R+ V LD ++ + A Sbjct: 175 ---YDVDTVMLSCTHYPFVEKEIREAFGPGVTILDPAERTVQAA 215 >gi|150021250|ref|YP_001306604.1| glutamate racemase [Thermosipho melanesiensis BI429] gi|149793771|gb|ABR31219.1| glutamate racemase [Thermosipho melanesiensis BI429] Length = 263 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 118/260 (45%), Gaps = 42/260 (16%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGG+ VL+K+ ++ H+IY+AD PYG AL+ ++ F D K Sbjct: 3 IGLFDSGIGGISVLKKLTYINGA-HYIYIADTERAPYGLRTSEALES-FVWEFVDFFHKK 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-- 133 + ACNT ++I L + + ++ I+ + +S + ++ T T++ Sbjct: 61 KVNEIFAACNTTDSII---LENNLDLVIKYNSI--IRAGVSAAKSSKVGVIGTNVTIKNG 115 Query: 134 --RTY---TSNLIHSYVSQCHIHLVSSMILASRVEEYACG---IKIKEDEIKKEIEGCFI 185 R Y ++ +Q + LV + R+ E + +K++ +K+ Sbjct: 116 SYRRYLEVEGKEVYQKATQLFVSLVEEGVFYGRMVEAIANYYLLPLKKENVKE------- 168 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 ++L CTH+P + + ++ P V +D ++ +++ LL + NT + V Sbjct: 169 ---------LILGCTHFPFLKGIISRVLP-KVRIIDPAEELSK----LLVKNNTRRPFV- 213 Query: 246 DDHALFLSGKPDIAMRRLMQ 265 +++G P R+L + Sbjct: 214 ---EFYVTGDPKEFERKLKR 230 >gi|197693600|gb|ACH71469.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|33865544|ref|NP_897103.1| putative aspartate and glutamate racemase:glutamate racemase [Synechococcus sp. WH 8102] gi|33632713|emb|CAE07525.1| Putative Aspartate and glutamate racemases:Glutamate racemase [Synechococcus sp. WH 8102] Length = 262 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 33/265 (12%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSG+GGL VL+++ +Y+ D PYGN A +R+ L Q Sbjct: 8 FDSGVGGLTVLRRVLERHGSVACVYLGDTARVPYGN-RPPAEIRRIAAEVVGWLRDQQVS 66 Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNT L +D E ++ P + +GA AAA ++ + +L+TPAT+ Sbjct: 67 TVVMACNTTNALARDVAEGQAGGPVIGLIGA------AAAMVETRRVGVLATPATV---- 116 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCFIEKE 188 S + + ++ + V E AC DE++ ++ ++E Sbjct: 117 --------ASAAYSASIEALHPGALVVEQACPAFVPLIEAGDFSSDELR-QVAKVYLEPL 167 Query: 189 -GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVF 245 + IVL CTHYPL++ + +QL P + +D + +AR+ +L PR T Sbjct: 168 LAASVETIVLGCTHYPLLIPLLKQLLPDAIQLVDPALGVARQLDAVLGVPRSTPGDTLEL 227 Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270 ++ PD R G + Sbjct: 228 GQCRFCVTADPDGFANRATPWLGAR 252 >gi|289424939|ref|ZP_06426718.1| glutamate racemase [Propionibacterium acnes SK187] gi|289154638|gb|EFD03324.1| glutamate racemase [Propionibacterium acnes SK187] gi|313763385|gb|EFS34749.1| glutamate racemase [Propionibacterium acnes HL013PA1] gi|313814691|gb|EFS52405.1| glutamate racemase [Propionibacterium acnes HL059PA1] gi|314914537|gb|EFS78368.1| glutamate racemase [Propionibacterium acnes HL005PA4] gi|314917605|gb|EFS81436.1| glutamate racemase [Propionibacterium acnes HL050PA1] gi|314919639|gb|EFS83470.1| glutamate racemase [Propionibacterium acnes HL050PA3] gi|314924269|gb|EFS88100.1| glutamate racemase [Propionibacterium acnes HL001PA1] gi|314956853|gb|EFT01007.1| glutamate racemase [Propionibacterium acnes HL027PA1] gi|314957644|gb|EFT01747.1| glutamate racemase [Propionibacterium acnes HL002PA1] gi|314967393|gb|EFT11492.1| glutamate racemase [Propionibacterium acnes HL082PA2] gi|314968973|gb|EFT13071.1| glutamate racemase [Propionibacterium acnes HL037PA1] gi|315098010|gb|EFT69986.1| glutamate racemase [Propionibacterium acnes HL059PA2] gi|315102644|gb|EFT74620.1| glutamate racemase [Propionibacterium acnes HL046PA1] gi|315104465|gb|EFT76441.1| glutamate racemase [Propionibacterium acnes HL050PA2] gi|315106208|gb|EFT78184.1| glutamate racemase [Propionibacterium acnes HL030PA1] gi|327325474|gb|EGE67278.1| glutamate racemase [Propionibacterium acnes HL103PA1] gi|327451223|gb|EGE97877.1| glutamate racemase [Propionibacterium acnes HL087PA3] gi|327452580|gb|EGE99234.1| glutamate racemase [Propionibacterium acnes HL083PA2] gi|328751976|gb|EGF65592.1| glutamate racemase [Propionibacterium acnes HL025PA2] gi|328754780|gb|EGF68396.1| glutamate racemase [Propionibacterium acnes HL087PA1] Length = 284 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEA------ 181 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESG 229 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 + + FL+ + + RRLM+GF Sbjct: 230 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|37811838|gb|AAR03910.1| glutamate racemase [Helicobacter pylori] Length = 255 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHV-------FRQLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI + LS P V++L ++ + A Sbjct: 170 LKILPEVVILGCTHFPLIAQKIEGYFMEYFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|224418377|ref|ZP_03656383.1| glutamate racemase [Helicobacter canadensis MIT 98-5491] gi|253827696|ref|ZP_04870581.1| glutamate racemase [Helicobacter canadensis MIT 98-5491] gi|313141908|ref|ZP_07804101.1| glutamate racemase [Helicobacter canadensis MIT 98-5491] gi|253511102|gb|EES89761.1| glutamate racemase [Helicobacter canadensis MIT 98-5491] gi|313130939|gb|EFR48556.1| glutamate racemase [Helicobacter canadensis MIT 98-5491] Length = 259 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 15/208 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL + IY D PYG + + + D ++ Sbjct: 6 IGLFDSGVGGISVLGNLINSKTFEEIIYYGDTARVPYGTRSKETIIQYSLEAL-DFFKQF 64 Query: 76 QPVLSVIACNT--AFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNT A+ L + + +P + + V A+ S ++ +L T AT+ Sbjct: 65 KLDLLVVACNTISAYGLEAMQKATNYPIIGVIEPGVLALTNNLQNKDSKIL-VLGTKATI 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+ + C I+ +++ + VEE G KI E ++ + + ++ Sbjct: 124 QSQLYQTLLENQGYSC-INSLATSLFVPLVEEGIFGGKILESVME-----YYFQDYTEKP 177 Query: 193 DVIVLACTHYPL----IVHVFRQLSPWP 216 D I+L CTH+PL I H F+ P P Sbjct: 178 DAIILGCTHFPLISKTIAHYFQNKFPTP 205 >gi|313828237|gb|EFS65951.1| glutamate racemase [Propionibacterium acnes HL063PA2] gi|315110459|gb|EFT82435.1| glutamate racemase [Propionibacterium acnes HL030PA2] Length = 284 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEA------ 181 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDDVTLISSSHQCARASYSLMVESG 229 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 + + FL+ + + RRLM+GF Sbjct: 230 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|300025005|ref|YP_003757616.1| glutamate racemase [Hyphomicrobium denitrificans ATCC 51888] gi|299526826|gb|ADJ25295.1| Glutamate racemase [Hyphomicrobium denitrificans ATCC 51888] Length = 281 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 30/223 (13%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + F+Y+AD PYGN A+ D+ + Sbjct: 2 IGVFDSGLGGLTVLRVLTQRFKAADFVYLADHAHVPYGNRPSDAIVGYTRDCVEDLFARG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-------PSMAFLGAVPAIKQAAAYT---------- 118 L ++ CNTA + L+ + + LG V +AA T Sbjct: 62 AK-LVLLGCNTATAVALRRLQQEWLPRSPWAGTHNVLGIVAPTVEAATQTPWAVTSPQYP 120 Query: 119 ---QSGLISILSTPATLRRTYTSNLIHSYVSQ-CHIHLVSSMI---LASRVEEYACGIKI 171 + I + T RT T+ + + + C V I LA +EE + Sbjct: 121 QKYNTDTIGVFGT----TRTVTAGVYPEEIGKRCPKVTVVQQICSELAGAIEEKQPEAHL 176 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 E+ ++ I G + +G +L CTH+PL+ H+FR+ P Sbjct: 177 -EELVRAGITGLLDQTDGVPPHRAILGCTHFPLVEHLFRKHLP 218 >gi|332669874|ref|YP_004452882.1| glutamate racemase [Cellulomonas fimi ATCC 484] gi|332338912|gb|AEE45495.1| glutamate racemase [Cellulomonas fimi ATCC 484] Length = 271 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 16/220 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+ D + PYG A++ + + D++D Sbjct: 6 IGIFDSGVGGLTVARSVLDQLPHESTLYIGDTLNTPYGPKPLAAVRAHALEVMDDLVDAG 65 Query: 76 QPVLSVIACNTA-FTLIKDE-----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L VIACNTA +++D LR P + + +PA ++A A T++G I ++ T Sbjct: 66 VKLL-VIACNTASAAVLRDARERYTLRRGIPVVEVI--LPAARRAVAATRTGRIGVIGTR 122 Query: 130 ATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ R Y ++ + L +S VE G+ + + E ++ Sbjct: 123 ATVDSRAYDD----AFAVAPGVTL-TSQACPRFVELVEAGVTSGPEVLAVAHEYLDPVRD 177 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYPL+ V + V + +S+ A+ Sbjct: 178 AG-VDTLVLGCTHYPLLTGVISYVMGDDVTLVSSSEETAK 216 >gi|197693650|gb|ACH71494.1| glutamate racemase [Helicobacter pylori] gi|197693652|gb|ACH71495.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L V+ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 +VI+L CTH+PLI RQ+ + Sbjct: 173 LPEVIILGCTHFPLIA---RQIEGY 194 >gi|30959108|gb|AAO73313.1| glutamate racemase [Helicobacter pylori] Length = 231 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI H Sbjct: 173 LPEVIILGCTHFPLIAH 189 >gi|139438502|ref|ZP_01772018.1| Hypothetical protein COLAER_01010 [Collinsella aerofaciens ATCC 25986] gi|133776041|gb|EBA39861.1| Hypothetical protein COLAER_01010 [Collinsella aerofaciens ATCC 25986] Length = 294 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 15/234 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P Y D PYG + ++ L K+ Sbjct: 14 IGVFDSGLGGLTVARAIATALPHESVYYFGDTKRCPYGTRTEDEVRS-FALQAGRWLSKH 72 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA + + +G + P + A T++ + +L+T T+R Sbjct: 73 DVKIMVIACNTATAAALRLAQQVL-DVPVIGVIAPGARAAINSTRTRRVGVLATNLTIRS 131 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKE----------IEGC 183 + I + ++ + VE E A G ++E ++ E + G Sbjct: 132 GAYTRAIQDLDAGVDVYGCPASSFVEVVEHELASGAHLQEQWLENEDIFDTPAVRALVGA 191 Query: 184 FIEKEGKRT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 +E R D +VL CTH+PL+V R V + +++ R +L R Sbjct: 192 TVEPLRDRGIDTVVLGCTHFPLLVGPIRHALGPGVRVVSSAEETTRELTDILTR 245 >gi|116490738|ref|YP_810282.1| glutamate racemase [Oenococcus oeni PSU-1] gi|290890158|ref|ZP_06553240.1| hypothetical protein AWRIB429_0630 [Oenococcus oeni AWRIB429] gi|122277078|sp|Q04G05|MURI_OENOB RecName: Full=Glutamate racemase gi|116091463|gb|ABJ56617.1| glutamate racemase [Oenococcus oeni PSU-1] gi|290480202|gb|EFD88844.1| hypothetical protein AWRIB429_0630 [Oenococcus oeni AWRIB429] Length = 281 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 5/190 (2%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++ +P +V D+ PYG ++K + + ++ K+ Sbjct: 9 IDSGLGGLTVVREALKQLPNESVYFVGDEARMPYGPRPTVEIQKFTLQMADFLVKKHNIK 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL-ISILSTPATLR-RTY 136 V+ACNTA +LR+ + + +G + A A L ++++ T +T+ + Y Sbjct: 69 ALVVACNTATAQALPQLRA-YLEIPVIGVISAGALAGINATRNLHVNVIGTQSTVESKAY 127 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDVI 195 LI + S I + VE G + + + I EK +GK++D + Sbjct: 128 YDQLI-ALNSDLVIEQKALPEFVQLVESDMAGTPKGKQIVYQAIHNWMEEKNDGKKSDTL 186 Query: 196 VLACTHYPLI 205 VL CTH+P++ Sbjct: 187 VLGCTHFPIL 196 >gi|197693670|gb|ACH71504.1| glutamate racemase [Helicobacter pylori] gi|197693672|gb|ACH71505.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L V+ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPVVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 173 LPEVVILGCTHFPLIAH 189 >gi|197693862|gb|ACH71600.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D A K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPATIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTLLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693682|gb|ACH71510.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQIK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LKILPEVVILGCTHFPLIAH 189 >gi|127663884|gb|ABO28624.1| glutamate recemase [Helicobacter pylori 908] Length = 255 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 30/247 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIA---------RRARCLLP 235 +VI+L CTH+PLI P P + + D+I ++ C P Sbjct: 173 LPEVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQNYALKKNACAFP 232 Query: 236 RINTHQT 242 ++ H + Sbjct: 233 KVEFHAS 239 >gi|217032399|ref|ZP_03437894.1| hypothetical protein HPB128_25g47 [Helicobacter pylori B128] gi|298736238|ref|YP_003728764.1| glutamate racemase [Helicobacter pylori B8] gi|216945966|gb|EEC24582.1| hypothetical protein HPB128_25g47 [Helicobacter pylori B128] gi|298355428|emb|CBI66300.1| glutamate racemase [Helicobacter pylori B8] Length = 255 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|50843138|ref|YP_056365.1| glutamate racemase [Propionibacterium acnes KPA171202] gi|50840740|gb|AAT83407.1| glutamate racemase [Propionibacterium acnes KPA171202] Length = 297 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D Sbjct: 22 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 80 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 81 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 140 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 141 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEA------ 194 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 GC D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 195 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESG 242 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 + + FL+ + + RRLM+GF Sbjct: 243 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 275 >gi|254779458|ref|YP_003057563.1| glutamate racemase [Helicobacter pylori B38] gi|254001369|emb|CAX29354.1| Glutamate racemase [Helicobacter pylori B38] Length = 255 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQIK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693680|gb|ACH71509.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQFNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 170 LKILPEVVILGCTHFPLIAH 189 >gi|317010769|gb|ADU84516.1| glutamate racemase [Helicobacter pylori SouthAfrica7] Length = 255 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG +D A K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPATIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQHVKNKNTPIL-VLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFAPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 173 VPEVVILGCTHFPLIAQ 189 >gi|210134751|ref|YP_002301190.1| glutamate racemase [Helicobacter pylori P12] gi|226707586|sp|B6JLD2|MURI_HELP2 RecName: Full=Glutamate racemase gi|210132719|gb|ACJ07710.1| glutamate racemase [Helicobacter pylori P12] Length = 255 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|108562952|ref|YP_627268.1| glutamate racemase [Helicobacter pylori HPAG1] gi|123373795|sp|Q1CTX8|MURI_HELPH RecName: Full=Glutamate racemase gi|107836725|gb|ABF84594.1| glutamate racemase [Helicobacter pylori HPAG1] Length = 255 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 32/248 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234 +V++L CTH+PLI LS P V +L ++ + A C Sbjct: 173 LPEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQKYALKKNA-CAF 231 Query: 235 PRINTHQT 242 P++ H + Sbjct: 232 PKVEFHAS 239 >gi|182440359|ref|YP_001828078.1| putative glutamate racemase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468875|dbj|BAG23395.1| putative glutamate racemase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 261 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 11/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + + + + Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDITALALDVAR-AAAAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIVACNTASVHALPALRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA +E E I + + + Sbjct: 120 PYQRGLIGDFGGTAEVTEVPCPGLADALEHG------DEAGIDRAVAAAAALTP-RDVRA 172 Query: 195 IVLACTHYPLIVHVFR 210 +VL CTHY L+ R Sbjct: 173 VVLGCTHYELVAARIR 188 >gi|197693772|gb|ACH71555.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTPAT 131 Q L ++ACNTA L +E++ F + +G + AIKQ ++ I +L T AT Sbjct: 62 QIELLIVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKAT 119 Query: 132 LRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 120 IQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLK 171 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPW 215 +VI+L CTH+PLI RQ+ + Sbjct: 172 ILPEVIILGCTHFPLIA---RQIEGY 194 >gi|329847625|ref|ZP_08262653.1| asp/Glu/Hydantoin racemase family protein [Asticcacaulis biprosthecum C19] gi|328842688|gb|EGF92257.1| asp/Glu/Hydantoin racemase family protein [Asticcacaulis biprosthecum C19] Length = 284 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 26/234 (11%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL + + +P+ FIY+AD PYG+ + + L + L + Sbjct: 5 VFDSGVGGLSIHHALVNRLPQADFIYLADQKHTPYGDRSGEEIVE-LTRQGCETLFEAGA 63 Query: 78 VLSVIACNTAFTLIKDELRSTFPS---------MAFLG-AVPAIKQAAAY---------- 117 L V+ACNTA + L+ T+ S + LG VP I+ A Sbjct: 64 SLVVLACNTASAVALRRLQQTWLSGFRKTYKRPVNVLGIIVPTIEAATGLPWEHEAERRG 123 Query: 118 ---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 + ++ + +T AT R I + + LA +E+ A + Sbjct: 124 EKIEKLDIVGVFATVATARSRVYEIEIDKRRQDIAVFTEACSGLADMIEKGADRDSLSA- 182 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +IK +E I + G+ D +L CTHY L+ +FRQ P + S+A+ Sbjct: 183 KIKGHVESLRI-RVGRYPDRAILGCTHYELVADLFRQHLPAGTPIIHQPPSVAK 235 >gi|317009473|gb|ADU80053.1| glutamate racemase [Helicobacter pylori India7] Length = 255 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 32/248 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234 +V++L CTH+PLI LS P V++L ++ ++ C Sbjct: 173 LPEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYAL-KKNTCAF 231 Query: 235 PRINTHQT 242 P++ H + Sbjct: 232 PKVEFHAS 239 >gi|15645174|ref|NP_207344.1| glutamate racemase [Helicobacter pylori 26695] gi|2492984|sp|P56068|MURI_HELPY RecName: Full=Glutamate racemase gi|2313665|gb|AAD07615.1| glutamate racemase (glr) [Helicobacter pylori 26695] Length = 255 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 32/248 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234 +V++L CTH+PLI LS P V++L + ++ + A C Sbjct: 173 LPEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQNYALKKNA-CAF 231 Query: 235 PRINTHQT 242 P++ H + Sbjct: 232 PKVEFHAS 239 >gi|208434471|ref|YP_002266137.1| glutamate racemase [Helicobacter pylori G27] gi|226707587|sp|B5Z6S2|MURI_HELPG RecName: Full=Glutamate racemase gi|208432400|gb|ACI27271.1| glutamate racemase [Helicobacter pylori G27] Length = 255 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-EKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|328462612|gb|EGF34566.1| glutamate racemase [Lactobacillus helveticus MTCC 5463] Length = 266 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 42/269 (15%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I + DSG+GG V++ + L P +++ D PYG+ + Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVKVIEKL-PHESTVFIGDSANMPYGDKSREQIIE 51 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117 ++ + FL + L + ACNTA + L++ +G + + AAA Sbjct: 52 LTRRSVKFLLQKKVK-----LIIFACNTATAVAMPTLQNEV-EQQIIGVIQSGSLAAART 105 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--- 174 T++ +++ +TP T+ H+Y + ++ E A I+ ++D Sbjct: 106 TKNKKVAVAATPVTINS-------HAYQKEIKFRDPDIKVMEVAAPELAPLIESQKDYDT 158 Query: 175 ---EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +K+ I + + D VL CTHYPLI + F + + +D +D +A+ Sbjct: 159 NLAAVKRSIAPL----KDQDFDTFVLGCTHYPLIQNEFVEALGDKIQIVDPADQVAQYTF 214 Query: 232 CLLPRINTHQTRVFDD---HALFLSGKPD 257 ++ R + FD H + +G PD Sbjct: 215 NVMRRDGLFSS--FDQAGKHEYYTTGDPD 241 >gi|197693626|gb|ACH71482.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693796|gb|ACH71567.1| glutamate racemase [Helicobacter pylori] gi|197693798|gb|ACH71568.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|1709184|sp|P52972|MURI_BACSH RecName: Full=Glutamate racemase gi|849141|gb|AAA68029.1| glutamate racemase [Lysinibacillus sphaericus] Length = 265 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 24/249 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSG+GGL V +++ +P Y+ D PYG + + + + L+K Sbjct: 5 IGVIDSGVGGLTVAKEIIKRLPNETIYYIGDTARCPYGPRTRQEV-RNFTWQMAKALEKM 63 Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131 + VIACNTA + + L+ FP + + GA A+K+ T+ + +L+T T Sbjct: 64 NIKMLVIACNTATAVALESLQRNMPFPVLGVINRGARAAVKK----TKRHEVVVLATEGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK---- 187 ++ + S + HI ++ VE E K + I + Sbjct: 120 IKSGAYEEALLSLNTSTHIIPLACPTFVPLVE---------SGEYKGQFANNLIAEGLKP 170 Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVF 245 + ++ D ++L CTHYP++ + V L +++ A+ +L T T Sbjct: 171 LKNEQFDTVILGCTHYPILQKQIEAVVGEDVFVLSSAEETAKDVEEMLAYNGTLADTNAK 230 Query: 246 DDHALFLSG 254 H + +G Sbjct: 231 PAHKFYATG 239 >gi|58336762|ref|YP_193347.1| gluracemase [Lactobacillus acidophilus NCFM] gi|227903323|ref|ZP_04021128.1| glutamate racemase [Lactobacillus acidophilus ATCC 4796] gi|75433023|sp|Q5FLV8|MURI_LACAC RecName: Full=Glutamate racemase gi|58254079|gb|AAV42316.1| gluracemase [Lactobacillus acidophilus NCFM] gi|227868952|gb|EEJ76373.1| glutamate racemase [Lactobacillus acidophilus ATCC 4796] Length = 267 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 31/235 (13%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WED--H 58 +DN P I + DSG GGL V +K+ +P I++ D+ PYG+ ED + Sbjct: 1 MDNRP--------IGLLDSGFGGLSVAKKVIEKLPNESTIFIGDNAHIPYGDRTREDIIN 52 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 ++ + FL + L VIACNTA + ++ +G + + AAA T Sbjct: 53 LTRRSVKFLLEKNVK-----LIVIACNTATAVAMPTMQKEV-EQQIIGVIQSGALAAART 106 Query: 119 QSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKED 174 + ++ I + + +++ LA VE +YA +K+ Sbjct: 107 TKNKNVAVVATNVTVASHAYQKEIKFRDPEIKVTELAAPKLAPLVEAQKDYATNLKV--- 163 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ-LSPWPVDWLDNSDSIAR 228 +K+ + GK D +VL CTHYPLI F + ++ V LD +D +A+ Sbjct: 164 -VKESLAPLM----GKEFDTLVLGCTHYPLIQKEFEEAINNKEVTILDPADQVAQ 213 >gi|308184333|ref|YP_003928466.1| glutamate racemase [Helicobacter pylori SJM180] gi|308060253|gb|ADO02149.1| glutamate racemase [Helicobacter pylori SJM180] Length = 255 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|118586558|ref|ZP_01544000.1| glutamate racemase [Oenococcus oeni ATCC BAA-1163] gi|118432999|gb|EAV39723.1| glutamate racemase [Oenococcus oeni ATCC BAA-1163] Length = 281 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 6/234 (2%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++ +P +V D+ PYG ++K + + ++ K+ Sbjct: 9 IDSGLGGLTVVREALKQLPNESVYFVGDEARMPYGPRPTVEIQKFTLQMADFLVKKHNIK 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLR-RTY 136 V+ACNTA +L++ + + +G + A A + T++ ++++ T +T+ + Y Sbjct: 69 ALVVACNTATAQALPQLKA-YLEIPVIGVISAGALAGISATRNLHVNVIGTQSTVESKAY 127 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDVI 195 LI + S I + VE G + + + I EK +GK++D + Sbjct: 128 YDQLI-ALNSDLVIEQKALPEFVQLVESDIAGTSQGKQIVYQAIHNWMEEKNDGKKSDTL 186 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLD-NSDSIARRARCLLPRINTHQTRVFDDH 248 VL CTH+P++ + V +D S+ I + A L H ++ + H Sbjct: 187 VLGCTHFPILKKEIQAAVDKNVAVVDPASEEILQTAEILRKNNAFHDSKNINHH 240 >gi|260575249|ref|ZP_05843249.1| glutamate racemase [Rhodobacter sp. SW2] gi|259022509|gb|EEW25805.1| glutamate racemase [Rhodobacter sp. SW2] Length = 270 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 50/226 (22%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--------NWEDHALKKRLMF 66 ++ +FDSG+GGL VL ++ +PE F+Y+ D+ PYG N A+++ Sbjct: 2 AVGVFDSGLGGLTVLDALQKRLPEVPFVYLGDNAHAPYGVRTAEDIFNLTCAAVER---- 57 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG--- 121 L+++ D L ++ACNTA ++ ++ P LG + +A Q G Sbjct: 58 LWAEGCD-----LVILACNTASASALKRMQESWVPPGKRVLGVFVPLIEALTERQWGDNS 112 Query: 122 --------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI-- 171 +++ +TPAT+ S+ ++ + VE CG + Sbjct: 113 PPREVDVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDA 160 Query: 172 --KEDEIKKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211 + DEI E + +E +R VL CTHYPL+ H+F + Sbjct: 161 IEQGDEILAEALVRSHVEALKRRMPLPQAAVLGCTHYPLMQHIFAE 206 >gi|153008159|ref|YP_001369374.1| Asp/Glu racemase [Ochrobactrum anthropi ATCC 49188] gi|151560047|gb|ABS13545.1| Asp/Glu racemase [Ochrobactrum anthropi ATCC 49188] Length = 278 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 12/220 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L + + +FD+GIG +++ +R P+ IY AD FPYG L L + S I Sbjct: 13 LNDPVAVFDAGIGSYALVELIRRSQPQRDIIYFADRASFPYGAKSRDQL---LSIMRSTI 69 Query: 72 --LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L V+A N ++ D L+S F ++ G P ++ A A + SG ++++ Sbjct: 70 QYLTSLGAQTIVLASNAPSVMVLDTLKSEF-AVPVYGVAPPVRTALAASHSGKVAVMGVR 128 Query: 130 ATLRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC-FIEK 187 + + ++ + + + L+++ + VE A ++ ++ +K C I Sbjct: 129 SMIESEELADFVRTQADNPGDVALINASAMVELVENGAF-LRQPDETAQKVAAFCDDIAA 187 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226 D + L+ TH P + F P W +LD +D + Sbjct: 188 SYPLIDTLTLSSTHLPWLRPFFETARPGW--QFLDPADDV 225 >gi|254525989|ref|ZP_05138041.1| glutamate racemase [Prochlorococcus marinus str. MIT 9202] gi|221537413|gb|EEE39866.1| glutamate racemase [Prochlorococcus marinus str. MIT 9202] Length = 264 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 23/248 (9%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWEDHALKKRLMFLFSDILDKY 75 IFDSGIGG +L + + Y+AD P+G N+++ L + + F +DK Sbjct: 7 IFDSGIGGFTILNSLLKTRKDVEVFYLADTKRIPFGGKNFKEIRLIAKEICNF--FVDKN 64 Query: 76 QPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L ++ACNT A ++++ L+ P + +V I +I +L+T T Sbjct: 65 LDAL-LVACNTTNACALDIMENNLK--VPCFDLINSVSGI------VDKQIIGVLATQTT 115 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R +Y N I+S I S +E+ K+ D++ + K Sbjct: 116 VRSSYYKNAINSKKENTIIFQQECPEFVSEIEKE----KLNLDKLNYLSDLYLRPLINKN 171 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDDHA 249 + ++L C+HYPLI R+ + +D S ++ +R +P+ ++ +++ Sbjct: 172 IEELILGCSHYPLIYDFLRKKLDSNITIIDPSVALIKRFNKFFDIPKTACYERLSYENVE 231 Query: 250 LFLSGKPD 257 F++ + D Sbjct: 232 FFVTSERD 239 >gi|328955986|ref|YP_004373319.1| glutamate racemase [Coriobacterium glomerans PW2] gi|328456310|gb|AEB07504.1| glutamate racemase [Coriobacterium glomerans PW2] Length = 309 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 27/232 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG V + + MP +Y+ D PYG ++ + + + ++ + Sbjct: 16 IGVFDSGVGGFTVARAISRAMPHESIVYIGDTARCPYGTRGVEEVRAFVAQVGTWLVRQR 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 V+ VIACNTA + F P + +G P + A T++ I +L+T T+ Sbjct: 76 VKVI-VIACNTATASALGLAQRMFDVPVIGVIG--PGARAAVLATRTREIGVLATDLTIA 132 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE-----------------I 176 I + + +H ++ VE G I D + Sbjct: 133 SGAYLRAIKNLDAGVGVHGCATQRFVELVESRLAG-GIGADAQWLDGADLFDTPEVRALV 191 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++E E G D +VL CTH+PL+V R + V + +++ R Sbjct: 192 RRETE----PLRGLDIDAVVLGCTHFPLLVRPIRAVLGRGVHVVSSAEETMR 239 >gi|217969659|ref|YP_002354893.1| glutamate racemase [Thauera sp. MZ1T] gi|217506986|gb|ACK53997.1| glutamate racemase [Thauera sp. MZ1T] Length = 268 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 6/216 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V++ + +P +Y D PYG + A + ++ L + Sbjct: 8 IGVFDSGVGGLTVVRALMERLPLEDIVYFGDTARVPYG-VKSVATIEHFTAQITEFLLQR 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPATLRR 134 + +IACNT + D + + L + A +AA G I ++ TP T+ Sbjct: 67 DVKMLIIACNTMAAVAADVVHRLAAGIPVLDVIEAGARAAVAASPGRRIGVIGTPTTINS 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + +H ++ + + VEE ++ ++ + E+ D Sbjct: 127 NAYARRMHELDPAVRVYSQACPLFVPLVEEGWLDHEVTRLTAQEYLRPVLAEE----VDS 182 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 +VL CTHYPL+ + R ++ V +D++ + A A Sbjct: 183 LVLGCTHYPLLKPLLRDVAGARVRLIDSALTTAELA 218 >gi|315499265|ref|YP_004088069.1| glutamate racemase [Asticcacaulis excentricus CB 48] gi|315417277|gb|ADU13918.1| Glutamate racemase [Asticcacaulis excentricus CB 48] Length = 284 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 108/275 (39%), Gaps = 42/275 (15%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL + + + MP FIY+ D PYG + + L + L Sbjct: 3 AIGVFDSGVGGLSIHRALVDRMPGADFIYLGDQKHAPYGERSGEEIVE-LTRQGCETLFN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-------------------PSMAFLGAVP----AI 111 + V+ CNTA + L+ST+ P++ +P A Sbjct: 62 AGASIVVLGCNTASAVALRRLQSTWLADYRKSIGRPVNVLGIIVPTIEAATGLPWEHEAE 121 Query: 112 KQAAAYTQSGLISILSTPATLR-RTYTSNL------IHSYVSQCHIHLVSSMILASRVEE 164 ++ A ++ I T AT R R Y + + + C I L ++MI A EE Sbjct: 122 RRGAKIENVDVLGIFCTTATARSRVYEIEIDKRRQDLAVFTEPC-IGL-AAMIEAGESEE 179 Query: 165 YACG-IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 ++ + +K I G+ D +L CTHY +I +F+ P + Sbjct: 180 KLTAVVESRVQALKTRI--------GRYPDRAILGCTHYEIIGELFKAALPEGTPLIHQP 231 Query: 224 DSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258 S+A + R + +HA +G P + Sbjct: 232 SSVANALESYIARHPEYAIGTSANHAFLTTGVPGL 266 >gi|197693754|gb|ACH71546.1| glutamate racemase [Helicobacter pylori] gi|197693756|gb|ACH71547.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|37811872|gb|AAR03940.1| glutamate racemase [Helicobacter pylori] Length = 255 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693716|gb|ACH71527.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693644|gb|ACH71491.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|30959110|gb|AAO73314.1| glutamate racemase [Helicobacter pylori] Length = 231 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE G ++ E ++ I E Sbjct: 121 QSNAYDNALKQQGYLNISHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKILPE-- 175 Query: 191 RTDVIVLACTHYPLIVH 207 VI+L CTH+PLI Sbjct: 176 ---VIILGCTHFPLIAQ 189 >gi|197693574|gb|ACH71456.1| glutamate racemase [Helicobacter pylori] gi|197693740|gb|ACH71539.1| glutamate racemase [Helicobacter pylori] gi|197693742|gb|ACH71540.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFGEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 173 LPEVVILGCTHFPLIAQ 189 >gi|157413034|ref|YP_001483900.1| glutamate racemase [Prochlorococcus marinus str. MIT 9215] gi|157387609|gb|ABV50314.1| Glutamate racemase [Prochlorococcus marinus str. MIT 9215] Length = 264 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 25/249 (10%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLMFLFSDILDK 74 IFDSGIGG +L + + Y+AD P+G E + K + F +DK Sbjct: 7 IFDSGIGGFTILNSLLKTRKDIEVFYLADTKRIPFGGKNFVEIRLIAKEICNFF---VDK 63 Query: 75 YQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L ++ACNT A ++++ L+ P + +V I +I +L+T Sbjct: 64 NLDAL-LVACNTTNACALDIMENNLK--VPCFDLINSVSGI------VDKQIIGVLATQT 114 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R +Y N I+S I S +E+ K+ D++ + K Sbjct: 115 TVRSSYYKNAINSKKENTIIFQQECPEFVSEIEKE----KLNLDKLNYLSDLYLRPLINK 170 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDDH 248 + ++L C+HYPLI R+ + +D S ++ ++ +P+ ++ +++ Sbjct: 171 NIEELILGCSHYPLIYDFLRKKLDSNITIIDPSVALIKKFNQFFDIPKTACYEGLSYENV 230 Query: 249 ALFLSGKPD 257 F++ K D Sbjct: 231 EFFVTSKRD 239 >gi|37521065|ref|NP_924442.1| glutamate racemase [Gloeobacter violaceus PCC 7421] gi|81710349|sp|Q7NKI2|MURI_GLOVI RecName: Full=Glutamate racemase gi|35212061|dbj|BAC89437.1| glutamate racemase [Gloeobacter violaceus PCC 7421] Length = 265 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 15/242 (6%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL---KKRLMFLFSDILDK 74 +FDSG+GGL VL+++ +P IY AD PYG+ + + ++ F Sbjct: 5 LFDSGLGGLTVLREIARRLPAQPVIYFADTARLPYGSRTPAEICRYVREILHWFEQ--QG 62 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Q VL +ACNT+ L + S + +G + A AA + I +++T AT++ Sbjct: 63 VQRVL--MACNTSSALALPVVASEY--ALKVGGLIAPAARAAARRGRRIGVIATAATVQS 118 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + I + + + V+ VE G ++ +E++ +R D Sbjct: 119 HAYTRAIQALTPRAQVWEVACPEFVPLVE----GGRLLGEEVRSVARRYLAPLVEQRIDT 174 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +V CTHYP + V L P V +D + + LP +TR F+SG Sbjct: 175 LVYGCTHYPYLAPVIGDLLPASVRCVDPAVAAVAELAAALPPSRRLETRAACH--FFVSG 232 Query: 255 KP 256 P Sbjct: 233 DP 234 >gi|197693562|gb|ACH71450.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L V+ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFAPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 VI+L CTH+PLI RQ+ + Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194 >gi|77412365|ref|ZP_00788676.1| glutamate racemase [Streptococcus agalactiae CJB111] gi|77161585|gb|EAO72585.1| glutamate racemase [Streptococcus agalactiae CJB111] Length = 159 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL V+++M +PE I++ D PYG +++ + + +L K + Sbjct: 9 LDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLTKNVKM 68 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + VIACNTA + E++ + LG + P A T SG + I+ TP T++ Sbjct: 69 I-VIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNSGKVGIIGTPMTVK 122 >gi|197693606|gb|ACH71472.1| glutamate racemase [Helicobacter pylori] gi|197693760|gb|ACH71549.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693738|gb|ACH71538.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 15/195 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLI 205 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLI 187 >gi|197693598|gb|ACH71468.1| glutamate racemase [Helicobacter pylori] gi|197693774|gb|ACH71556.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 +VI+L CTH+PLI RQ+ + Sbjct: 173 LPEVIILGCTHFPLIA---RQIEGY 194 >gi|197693728|gb|ACH71533.1| glutamate racemase [Helicobacter pylori] gi|197693866|gb|ACH71602.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693704|gb|ACH71521.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693588|gb|ACH71463.1| glutamate racemase [Helicobacter pylori] gi|197693852|gb|ACH71595.1| glutamate racemase [Helicobacter pylori] gi|197693854|gb|ACH71596.1| glutamate racemase [Helicobacter pylori] gi|197693856|gb|ACH71597.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693848|gb|ACH71593.1| glutamate racemase [Helicobacter pylori] gi|197693850|gb|ACH71594.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693564|gb|ACH71451.1| glutamate racemase [Helicobacter pylori] gi|197693744|gb|ACH71541.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693632|gb|ACH71485.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693630|gb|ACH71484.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 +VI+L CTH+PLI RQ+ + Sbjct: 173 LPEVIILGCTHFPLIA---RQIEGY 194 >gi|330717928|ref|ZP_08312528.1| glutamate racemase [Leuconostoc fallax KCTC 3537] Length = 277 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 18/212 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72 I + DSGIGGL V+++ +P IY+ D PYG E A K++ +D L Sbjct: 7 IGMVDSGIGGLTVVKESLEKLPNEQIIYIGDTARMPYGPRTPEEVIAFTKQM----ADFL 62 Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + + L VIACNTA L+ P + +G + +A T + I I++T Sbjct: 63 IATKDIKLLVIACNTATASALIPLQEMLP-IPVIGVINSGASRAVQATHNQKIGIIATEG 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ ++ I + Q + + VE+ + + + ++K ++ + Sbjct: 122 TIASQIYTHKIRALNQQIEVFSQAEPDFVKLVEDNQYRLPVAQHQVKAHLQSL----KQA 177 Query: 191 RTDVIVLACTHYPL----IVHVFRQLSPWPVD 218 D ++L CTH+PL IV F +L +D Sbjct: 178 NIDTLILGCTHFPLLRPFIVEAFGELDVTLID 209 >gi|88856297|ref|ZP_01130956.1| glutamate racemase [marine actinobacterium PHSC20C1] gi|88814381|gb|EAR24244.1| glutamate racemase [marine actinobacterium PHSC20C1] Length = 288 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 12/217 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P +YV D + PYG +++ + + ++D Sbjct: 16 IGVFDSGVGGLTVARAIIDQLPHESIVYVGDTLHSPYGPKPIADVRRYALEVMDRLVDDG 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L VIACNTA + + R + + V PA + A T++ + ++ T T Sbjct: 76 VKLL-VIACNTASAAMLRDARERYTEAYGIEVVEVIQPATRAAVRQTRNRRVGVIGTEGT 134 Query: 132 LR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 ++ R Y ++ + I L + R E+ E+ E + Sbjct: 135 IKSRAYED----AFAAASDIELFTQA--CPRFVEFVEAGVTTGPEVLAVAEEYLAPLKKA 188 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D +VL CTHYP I + + V + +++ A Sbjct: 189 EIDTLVLGCTHYPHISAAIQYVMGREVTLVSSAEETA 225 >gi|197693868|gb|ACH71603.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-EKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693794|gb|ACH71566.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693628|gb|ACH71483.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 173 LPEVVILGCTHFPLIAQ 189 >gi|325479835|gb|EGC82920.1| glutamate racemase [Anaerococcus prevotii ACS-065-V-Col13] Length = 249 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 15/209 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I IFDSG+GGL VL+++ + + Y D + PYG E K+ ++ DI+D Sbjct: 4 IGIFDSGLGGLTVLREL-IKTNKASYFYFGDTLRVPYGGRE----KEEIISFAEDIVDYL 58 Query: 74 -KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y +IACNT L D L+ + + F+ + + A+ G +L T T+ Sbjct: 59 ENYNIDYYIIACNTISVLATDILKEKY-NKDFI-PITDMGLRASLACDGDFLVLGTKTTV 116 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N I + ++ V++ L +E + E+ +K ++ K+ Sbjct: 117 NSHFYKNNIEK-LKDAKVYEVAATKLVDLIESGT----LDEENLKFYLDDYLQIANEKKI 171 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 I+LACTHYP+I + + + +D Sbjct: 172 PNIILACTHYPIIRDSIEKRLTYKANIID 200 >gi|197693806|gb|ACH71572.1| glutamate racemase [Helicobacter pylori] gi|197693808|gb|ACH71573.1| glutamate racemase [Helicobacter pylori] gi|197693810|gb|ACH71574.1| glutamate racemase [Helicobacter pylori] gi|197693812|gb|ACH71575.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693816|gb|ACH71577.1| glutamate racemase [Helicobacter pylori] gi|197693818|gb|ACH71578.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693568|gb|ACH71453.1| glutamate racemase [Helicobacter pylori] gi|197693714|gb|ACH71526.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693708|gb|ACH71523.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L V+ACNTA L +E++ S P + + ++ AIKQ + ++ +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNTPIL-VLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|237740830|ref|ZP_04571311.1| glutamate racemase [Fusobacterium sp. 4_1_13] gi|229431127|gb|EEO41339.1| glutamate racemase [Fusobacterium sp. 4_1_13] Length = 257 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 10/220 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ +R P+ IY AD FPYG LK + + Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIKKSVDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI---LST 128 L+K + V+A N + D++++ +G P +K + + I + Sbjct: 61 LEKGASFI-VLASNAPSITVLDKIKN---KNKVIGIYPPLKNVLNDRRKNTLIIGAKVMI 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 ++ + Y + Y Q H+ S +I ++ + E I+ I+ C E + Sbjct: 117 ESSELQDYIKKEVGDYCKQFHVENASPLIQLIESGDFINNTEETEKTIRNFIDNC--ENK 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + D I L+ TH P I F+++ P V D +D++ + Sbjct: 175 FGKLDSITLSSTHLPWISSYFKKIIP-EVKLYDPADNLVK 213 >gi|197693832|gb|ACH71585.1| glutamate racemase [Helicobacter pylori] gi|197693834|gb|ACH71586.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI H Sbjct: 173 LPEVIILGCTHFPLIAH 189 >gi|91070144|gb|ABE11066.1| putative aspartate and glutamate racemases:glutamate racemase [uncultured Prochlorococcus marinus clone HF10-11A3] Length = 264 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 25/257 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLMFLFSDIL 72 I IFDSGIGG +L + + Y+AD P+G+ E + K + F+ Sbjct: 5 IGIFDSGIGGFTILNSLLKTRKDVEVFYLADTKRIPFGSKNFKEIRLIAKEICNFFA--- 61 Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 DK L ++ACNT A +++D L+ P + +V I +I +L+T Sbjct: 62 DKNLDAL-LVACNTTNACALDILEDNLK--IPCFDLINSVSGI------VDKKIIGVLAT 112 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+R +Y I+S I S +E+ + K + + I Sbjct: 113 QATVRSSYYKKAINSKKENTKIFQQECPEFVSEIEKEKLNLH-KLNYLSDLYLRPLI--- 168 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR--ARCLLPRINTHQTRVFD 246 K + ++L C+HYPLI R+ + +D S ++ ++ + + +++ ++ Sbjct: 169 NKNIEELILGCSHYPLIYDFLRKKLDSNIKIIDPSVALVKKFNESFAIQKTYCYESLSYE 228 Query: 247 DHALFLSGKPDIAMRRL 263 + F++ + D+ +++ Sbjct: 229 NVEFFVTSEKDVFFKKV 245 >gi|317012362|gb|ADU82970.1| glutamate racemase [Helicobacter pylori Lithuania75] Length = 255 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALKEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 173 LPEVVILGCTHFPLIAQ 189 >gi|197693758|gb|ACH71548.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|315093634|gb|EFT65610.1| glutamate racemase [Propionibacterium acnes HL060PA1] Length = 284 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 112/273 (41%), Gaps = 36/273 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ + Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEAD----- 182 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 183 -------------CDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESG 229 Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267 + + FL+ + + RRLM+GF Sbjct: 230 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|237739926|ref|ZP_04570407.1| asp/Glu racemase [Fusobacterium sp. 2_1_31] gi|229423534|gb|EEO38581.1| asp/Glu racemase [Fusobacterium sp. 2_1_31] Length = 263 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 10/225 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 +K+ +I +FD+G+G +++ ++ P+ IY AD FPYG L K ++ Sbjct: 5 EKMNKAIAVFDAGLGSYAIVEAIKKAYPKQDIIYFADRKSFPYGTKTTDEL-KTIIEDSV 63 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI---L 126 D L K V+A N + D++++ +G P +K + + I + Sbjct: 64 DFLLKKGASFIVLASNAPSITVLDKIKN---KDNVIGIYPPLKNVINDKKKNTLIIGAKV 120 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 + + Y + + Q H+ S +I ++ I+ E+ IK I+ C E Sbjct: 121 MIDSFELQEYIKKEVGDFQKQFHVENASPLIQLIESGDFINNIEKTENTIKNFIKTCE-E 179 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 K GK D I L+ TH P + F+++ P D +DS+ + + Sbjct: 180 KYGK-LDSITLSSTHLPWLSSYFQKIIP-EAKLYDPADSLVKAIK 222 >gi|197693572|gb|ACH71455.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 24/208 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPW 215 +VI+L CTH+PLI RQ+ + Sbjct: 170 LEILPEVIILGCTHFPLIA---RQIEGY 194 >gi|1709187|sp|P52974|MURI_STAHA RecName: Full=Glutamate racemase gi|520574|gb|AAA20474.1| glutamate racemase [Staphylococcus haemolyticus] gi|1093233|prf||2103194B Glu racemase Length = 266 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 9/246 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ L + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGDEVKQFTTQLANKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + ++ + VIACNTA + + L+ P + +G + P + A T++ + IL T Sbjct: 61 M-QFDIKMLVIACNTATAVALEHLQQMLP-IPVIGVIEPGSRTAIMTTKNQNVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189 T++ + I H+ VE+ ++ + I I + Sbjct: 119 TIKSEAYRHHIKHINPNVHVLWCGLPGFVPLVEQ----MRYDDPTITSIVIHQTLKQWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248 D I+L CTHYPL+ + + AR LL N H + +H Sbjct: 175 TDADTIILGCTHYPLLYKPINDYFGGEKKVISSGLETAREVSALLTFSNEHASYTQHPEH 234 Query: 249 ALFLSG 254 F +G Sbjct: 235 RFFATG 240 >gi|197693612|gb|ACH71475.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 173 LPEVVILGCTHFPLIAQ 189 >gi|109947429|ref|YP_664657.1| glutamate racemase [Helicobacter acinonychis str. Sheeba] gi|123066226|sp|Q17XG8|MURI_HELAH RecName: Full=Glutamate racemase gi|109714650|emb|CAJ99658.1| murI [Helicobacter acinonychis str. Sheeba] Length = 255 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D A K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDSATIKQFSLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L + ++ S P + + ++ AIKQ + ++ +L T AT+ Sbjct: 62 EIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKDKNTPIL-VLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 R + N + Y++ H+ ++ + +EE + E E+ + + Sbjct: 121 RSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NVLEGELLETCMRYYFAPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 FPEVIILGCTHFPLIAQ 189 >gi|197693706|gb|ACH71522.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693634|gb|ACH71486.1| glutamate racemase [Helicobacter pylori] gi|197693636|gb|ACH71487.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 173 LPEVVILGCTHFPLIAQ 189 >gi|28378862|ref|NP_785754.1| glutamate racemase [Lactobacillus plantarum WCFS1] gi|254557068|ref|YP_003063485.1| glutamate racemase [Lactobacillus plantarum JDM1] gi|38258032|sp|Q88V19|MURI_LACPL RecName: Full=Glutamate racemase gi|28271699|emb|CAD64605.1| glutamate racemase [Lactobacillus plantarum WCFS1] gi|254045995|gb|ACT62788.1| glutamate racemase [Lactobacillus plantarum JDM1] Length = 273 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 29/258 (11%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +++I DSG+GGL V+++ +P ++ D PYG ++ F +D L Sbjct: 4 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRT-FSFQMADFL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 Q + VIACNTA LR S+ +G + P + A + I +++T T Sbjct: 63 MAKQIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 121 Query: 132 LRRT------YTSNLIHSYVSQC---HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +R T + + VSQ + LV S S V + +K ++KK+ Sbjct: 122 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVAKRVVAETLK--QLKKQ--- 176 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NT 239 D +VL CTHYPL+ + + + V +D+ +L + N Sbjct: 177 --------DVDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIAND 228 Query: 240 HQTRVFDDHALFLSGKPD 257 T+ + D + +G D Sbjct: 229 RSTKRYPDE-YYTTGAAD 245 >gi|294782987|ref|ZP_06748311.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA] gi|294479865|gb|EFG27642.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA] Length = 257 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 14/225 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I +FD+G+G +++ ++ P+ IY AD FPYG L K ++ D Sbjct: 1 MNKAIAVFDAGLGSYAIVEAIKKTYPQQDIIYFADRKSFPYGTKTTDEL-KTIIEDSVDF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126 L K V+A N + D++++ +G P +K + + I + Sbjct: 60 LLKKGASFIVLASNAPSITVLDKIKN---KDNVIGIYPPLKNVIKDKKKNTLIIGAKVMI 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +P + Y + + Q H+ S +I ++ I+ E+ IK I+ C E Sbjct: 117 DSPEL--QEYIKKEVGDFYKQFHLENASPLIQLIESGDFINNIEKTENTIKNFIKTC--E 172 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 ++ + D I L+ TH P + F+++ P D +DS+ + + Sbjct: 173 EKYGKLDSITLSSTHLPWLSSYFQKIIP-EAKLYDPADSLVKAIK 216 >gi|300768032|ref|ZP_07077938.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494381|gb|EFK29543.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 279 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 29/258 (11%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +++I DSG+GGL V+++ +P ++ D PYG ++ F +D L Sbjct: 10 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRT-FSFQMADFL 68 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 Q + VIACNTA LR S+ +G + P + A + I +++T T Sbjct: 69 MAKQIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 127 Query: 132 LRRT------YTSNLIHSYVSQC---HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +R T + + VSQ + LV S S V + +K ++KK+ Sbjct: 128 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVAKRVVAETLK--QLKKQ--- 182 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NT 239 D +VL CTHYPL+ + + + V +D+ +L + N Sbjct: 183 --------DVDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIAND 234 Query: 240 HQTRVFDDHALFLSGKPD 257 T+ + D + +G D Sbjct: 235 RSTKRYPDE-YYTTGAAD 251 >gi|197693552|gb|ACH71445.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 173 LPEVVILGCTHFPLIAQ 189 >gi|197693570|gb|ACH71454.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQHVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|297571671|ref|YP_003697445.1| glutamate racemase [Arcanobacterium haemolyticum DSM 20595] gi|296932018|gb|ADH92826.1| glutamate racemase [Arcanobacterium haemolyticum DSM 20595] Length = 282 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 12/218 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL V + + +P YV D PYG +++ + + ++ Sbjct: 10 IGVFDSGIGGLTVARAIIDQLPYESITYVGDTANCPYGPRPIAHVRELALNVMDHLVSTG 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L VIACN+A + + + R + + V PA + A T++ I +++T AT Sbjct: 70 VKML-VIACNSASSAVLHDARERYTKQLGIPVVEVIRPAARAALHATRNNKIGVIATQAT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-CGIKIKEDEIKKEIEGCFIEKEGK 190 ++ + + + V ++ S A R E+A GI + +K E KE Sbjct: 129 IQSGAYDDAL-AVVPDVNVFSAS----APRFVEFAEAGITTGDLVLKTAREYLEPIKE-S 182 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTHYP + V + V + +++ A+ Sbjct: 183 GVDTLVLGCTHYPFLSGVIGYVMGEGVLLVSSAEETAK 220 >gi|308181062|ref|YP_003925190.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046553|gb|ADN99096.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 273 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 29/258 (11%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +++I DSG+GGL V+++ +P ++ D PYG ++ F +D L Sbjct: 4 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRT-FSFQMADFL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 Q + VIACNTA LR S+ +G + P + A + I +++T T Sbjct: 63 IAKQIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 121 Query: 132 LRRT------YTSNLIHSYVSQC---HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +R T + + VSQ + LV S S V + +K ++KK+ Sbjct: 122 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVAKRVVAETLK--QLKKQ--- 176 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NT 239 D +VL CTHYPL+ + + + V +D+ +L + N Sbjct: 177 --------DVDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIAND 228 Query: 240 HQTRVFDDHALFLSGKPD 257 T+ + D + +G D Sbjct: 229 RSTKRYPDE-YYTTGAAD 245 >gi|197693662|gb|ACH71500.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 173 LPEVVILGCTHFPLIAQ 189 >gi|253582420|ref|ZP_04859643.1| glutamate racemase [Fusobacterium varium ATCC 27725] gi|251835959|gb|EES64497.1| glutamate racemase [Fusobacterium varium ATCC 27725] Length = 263 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 14/204 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-HALKKRLMFLFS 69 ++SI IFDSGIGGL +L+K+R L+P + IY D PY + ED L ++M Sbjct: 4 ESSIGIFDSGIGGLTILKKIRELLPRENIIYYGDWKNNPYSEKSKEDIQNLSAKIM---- 59 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILST 128 D L + VI C+ D L+S + ++ +G + +K A ++ I+++ + Sbjct: 60 DFLIRNNCKAVVIGCSIFSAASLDFLKSQY-NIPIIGMIEGGVKSAILESKQKKIAVMGS 118 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ I ++ +S L + +E+ G + D + EI ++ + Sbjct: 119 AFTIKSNVYEESIKEIDPNITVYQISCKALCAMLEK---GWENYPDRM--EILESYLCQI 173 Query: 189 GKRTDVIVLACTHYPLIVHVFRQL 212 D ++L THYP I++ R+ Sbjct: 174 PDTADTLILGGTHYPFILNDIRKF 197 >gi|227514545|ref|ZP_03944594.1| glutamate racemase [Lactobacillus fermentum ATCC 14931] gi|227087102|gb|EEI22414.1| glutamate racemase [Lactobacillus fermentum ATCC 14931] Length = 268 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 16/258 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V++ ++ +P I+V D FPYG +D A + Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGT-KDQAEVR 51 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L L K+ + V+ACNTA L++ P + +G + P + A A + G Sbjct: 52 QLALSIGAFLLKHDVKMMVVACNTATAAALPALQAVLP-IPVIGVIEPGARAALAQDKKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T AT I + ++ + VE G K E+ E Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIVEHGQTGTA-KAQEVVSEQL 169 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 F E K +++ CTH+P + + V +D + A+ L + Sbjct: 170 MTFKEHPVK---TLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226 Query: 242 TRVFDDHALFLSGK-PDI 258 ++ L+ +G PD+ Sbjct: 227 NHAHPNYHLYSTGNLPDL 244 >gi|242373382|ref|ZP_04818956.1| glutamate racemase [Staphylococcus epidermidis M23864:W1] gi|242348745|gb|EES40347.1| glutamate racemase [Staphylococcus epidermidis M23864:W1] Length = 266 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 105/254 (41%), Gaps = 25/254 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEEVKQFTTEIAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ P + +G + P + A T++ + +L T Sbjct: 61 ME-FNIKMLVIACNTATAVALEHLQKLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189 T++ I +++ V+ VE+ ++ + I I + Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQ----MRYNDPTITSIVIHQTLKQWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPV-DWLDNSDSI-------ARRARCLLPRINTHQ 241 D ++L CTHYPL+ P+ D+ D + ++ AR LL N H Sbjct: 175 SDADTVILGCTHYPLLYK--------PIYDYFDGTKTVISSGLETAREVSALLTFSNEHA 226 Query: 242 TRV-FDDHALFLSG 254 + H F +G Sbjct: 227 SYTEHPKHRFFATG 240 >gi|57168788|ref|ZP_00367919.1| glutamate racemase [Campylobacter coli RM2228] gi|57019835|gb|EAL56518.1| glutamate racemase [Campylobacter coli RM2228] Length = 247 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 10/194 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + D K+ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIVKFCLEAL-DFFSKF 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + +IACNTA D LR + FP + A + A ++ I +++T AT++ Sbjct: 62 NIDMLIIACNTASAYALDALRLKADFPIYGVIDAGVEATKKALLDKNKKILVIATKATIQ 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 N + ++ +++ + VEE ++ + ++ +G + D Sbjct: 122 SKEYQNRLQKQ-GFNNVDALATGLFVPMVEEGIFEGELLQSAMRYYFKGI------ETPD 174 Query: 194 VIVLACTHYPLIVH 207 ++LACTH+PL+ + Sbjct: 175 ALILACTHFPLLAN 188 >gi|197693800|gb|ACH71569.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L V+ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----GILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|317495245|ref|ZP_07953615.1| glutamate racemase [Gemella moribillum M424] gi|316914667|gb|EFV36143.1| glutamate racemase [Gemella moribillum M424] Length = 264 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 15/252 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALK---KRLMFL 67 ++N+I +FDSG+GGL V +++ +P Y D PYG+ +D +K K + FL Sbjct: 1 MKNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTKDEIIKNTEKAVEFL 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 + + + V+ACNTA + L+ + ++ +G V P ++A T++ + +L Sbjct: 61 INQGVK-----MIVLACNTATAAALEYLQDRY-NLPIIGVVQPGARRAIQATENNNVLVL 114 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T I + S ++ + +E + E +K ++ + Sbjct: 115 GTQFTADSKVYDKEIKNINSDIVVYDKACPTFCPFIEAEG---NLVEGATQKLLKDVLFD 171 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D +VL CTHYP++ + + + + AR +L Q ++ Sbjct: 172 TKLLDIDTVVLGCTHYPILKKDIEEYYGNNIKVISSGHEAARDVSTVLGYAKLLQKKLNK 231 Query: 247 -DHALFLSGKPD 257 +H F+S + + Sbjct: 232 TEHKFFISKESE 243 >gi|294785961|ref|ZP_06751248.1| glutamate racemase [Fusobacterium sp. 3_1_27] gi|294486298|gb|EFG33661.1| glutamate racemase [Fusobacterium sp. 3_1_27] Length = 256 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 13/224 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ +R P+ IY AD FPYG LK + + + Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIEKSVNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K + V+A N + D++++ +G P ++ + + I+ Sbjct: 61 LEKGASFI-VLASNAPSITVLDKIKNN----KVIGIYPPLRDVINDKKKNTL-IIGAKVM 114 Query: 132 LRRTYTSNLIHSYVS----QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 + + N I V Q H+ SS+I + I+ E IK I+ C E Sbjct: 115 IESSELQNYIKREVGDSYKQFHVENASSLIQLIESGTFINNIEETEKTIKNFIDNC--EN 172 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 + + D I L+ TH P + F ++ P D +DS+ + + Sbjct: 173 KFGKLDSITLSSTHLPWLSSYFEKIIPQ-TKLYDPADSLVKAIK 215 >gi|313115114|ref|ZP_07800601.1| glutamate racemase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622554|gb|EFQ06022.1| glutamate racemase [Faecalibacterium cf. prausnitzii KLE1255] Length = 275 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 28/266 (10%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60 +DN P I +FDSG+GGL ++++R +P IY D PYG+ + Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPHEEIIYFGDTGRVPYGSRSPETILQ 52 Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117 ++ + FL S + + AC T + + P + +LG V A ++AA Sbjct: 53 YARQDVAFLLSKNVK-----CIMAACGTVSSTYPAAEAAKLP-VPYLGVVDAAAREAAFA 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T++ I ++ T AT+R L+ V I + + VE G +E + Sbjct: 107 TRNRRIGVIGTAATIRSRSYEKLLRQLVPGVEITAQACPLFVPLVE---AGYVDHSEESR 163 Query: 178 KEIEGCFI-----EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 +++ I E D ++L CTHYPL+ + + V +D + + A Sbjct: 164 QQVTKLVIAQYLTEVREAGVDTLILGCTHYPLLKTMIGEFMGQSVTLVDPAKTAAHHLEQ 223 Query: 233 LLPRINTHQTRVFDDHA-LFLSGKPD 257 +L + + A ++S PD Sbjct: 224 MLSERGLKAAQEHEGQAHFYVSDVPD 249 >gi|239636354|ref|ZP_04677356.1| glutamate racemase [Staphylococcus warneri L37603] gi|239597709|gb|EEQ80204.1| glutamate racemase [Staphylococcus warneri L37603] Length = 265 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 9/246 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + Sbjct: 1 MNRPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRSGEEVKQFTTEIAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L++ P + +G + P + A T++ + IL T Sbjct: 61 VE-FDIKMLVIACNTATAVALEHLQNILP-IPVIGVIEPGARTAIMTTKNQNVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189 T++ I ++ ++ VE+ ++ + I I + Sbjct: 119 TIKSEAYRKHIKRINPNVEVYGIACPGFVPLVEQ----MRYNDPTITSIVIHQTLKQWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248 D ++L CTHYPL+ + + AR LL N H + H Sbjct: 175 SEADTVILGCTHYPLLYQPINDYFGGKKTVISSGLETAREVSALLTFSNEHASYTQHPPH 234 Query: 249 ALFLSG 254 F +G Sbjct: 235 RFFATG 240 >gi|197693664|gb|ACH71501.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 173 LPEVVILGCTHFPLIAQ 189 >gi|256846771|ref|ZP_05552226.1| glutamate racemase [Fusobacterium sp. 3_1_36A2] gi|256717737|gb|EEU31295.1| glutamate racemase [Fusobacterium sp. 3_1_36A2] Length = 257 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 10/220 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ +R P+ IY AD FPYG LK + + Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIKKSVDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI---LST 128 L+K + V+A N + D++++ +G P +K + + I + Sbjct: 61 LEKGASFI-VLASNAPSITVLDKIKN---KNKVIGIYPPLKNVLNDRRKNTLIIGAKVMI 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 ++ + Y + Y Q H+ S +I + + E I+ I+ C E + Sbjct: 117 ESSELQDYIKREVGDYCKQFHVENASPLIQLIESGNFINNTEETEKTIRNFIDNC--ENK 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + D I L+ TH P I F+++ P V D +D++ + Sbjct: 175 FGKLDSITLSSTHLPWISSYFKKIIP-EVKLYDPADNLVK 213 >gi|227495766|ref|ZP_03926077.1| glutamate racemase [Actinomyces urogenitalis DSM 15434] gi|226834695|gb|EEH67078.1| glutamate racemase [Actinomyces urogenitalis DSM 15434] Length = 288 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 36/230 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P +Y+ D PYG +++ + + +++D Sbjct: 14 IGMFDSGVGGLTVARAVLDQLPGEQVLYIGDTEHSPYGPRPIDEVRELALAVMDELVDSG 73 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L VIACNTA + + R + + V PA + AA T++G I +++T T Sbjct: 74 VKML-VIACNTASAAVLHDARRRYTLGKGVPVVEVIHPAARAAARVTRNGRIGLIATQGT 132 Query: 132 L-RRTYT------------SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 + R Y S +V + + + SR EEY + ++E + Sbjct: 133 VDSRAYADALEAVPGVELLSTACPDFVELAERGVTTGPQVMSRAEEYL--LPLREAGV-- 188 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYPL++ + V + +S+ A+ Sbjct: 189 --------------DTLILGCTHYPLLIGPISYVMGEDVTLVTSSEETAK 224 >gi|197693720|gb|ACH71529.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693610|gb|ACH71474.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 170 LKILPEVIILGCTHFPLIAQ 189 >gi|197693638|gb|ACH71488.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 15/195 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L V+ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIKLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLI 205 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLI 187 >gi|197693718|gb|ACH71528.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 173 LPEVVILGCTHFPLIAQ 189 >gi|144898237|emb|CAM75101.1| Asp/Glu racemase [Magnetospirillum gryphiswaldense MSR-1] Length = 198 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 3/180 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P IY+ D PYG A+ + ++ Sbjct: 9 IGVFDSGVGGLTVLKALRERLPAESLIYLGDTARLPYGTKSAAAVSHYALQAAHALVRMG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L V+A NT+ + LR+ FP + G V P AA + G I +++T +T++ Sbjct: 69 IKAL-VVADNTSSAHALEALRAEFPGLPVTGVVEPGAAAAALASAQGRIVVIATDSTVQA 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTD 193 IH+ + + + S VEE I E + ++ F E KR + Sbjct: 128 GTYPRAIHNSRPGARVISKACPLFVSMVEEGMTDGPIAEQLARHYLDPLFANADEDKRVN 187 >gi|228476279|ref|ZP_04060981.1| glutamate racemase [Staphylococcus hominis SK119] gi|314936670|ref|ZP_07844017.1| glutamate racemase [Staphylococcus hominis subsp. hominis C80] gi|228269682|gb|EEK11184.1| glutamate racemase [Staphylococcus hominis SK119] gi|313655289|gb|EFS19034.1| glutamate racemase [Staphylococcus hominis subsp. hominis C80] Length = 265 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 17/250 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K L + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKTFTTQLANKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ P + +G + P + A T++ + IL T Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQQLLP-IPVIGVIEPGARTAIMTTKNQKVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I ++ V+ VE+ ++ D+ I I + K Sbjct: 119 TIKSEAYRHHIKRINPNVEVYGVACPGFVPLVEQ------MRYDD--PTITSIVIHQTLK 170 Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV- 244 D ++L CTHYPL+ + + AR LL N H + Sbjct: 171 HWRNTDADTVILGCTHYPLLYKPINDYFGGNKKVISSGLETAREVSALLTFSNEHASYTQ 230 Query: 245 FDDHALFLSG 254 H F +G Sbjct: 231 HPKHRFFATG 240 >gi|305432470|ref|ZP_07401632.1| glutamate racemase [Campylobacter coli JV20] gi|304444509|gb|EFM37160.1| glutamate racemase [Campylobacter coli JV20] Length = 253 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 10/198 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I +FDSG+GGL VL+ + IY D PYG + + K + D Sbjct: 5 IKMKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIVKFCLEAL-DF 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 K+ + +IACNTA D LR + FP + A + A ++ I +++T Sbjct: 64 FSKFNIDMLIIACNTASAYALDALRLKADFPIYGVIDAGVEATKKALLDKNKKILVIATK 123 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT++ N + ++ +++ + VEE ++ + ++ +G Sbjct: 124 ATIQSKEYQNRLQKQ-GFNNVDALATGLFVPMVEEGIFEGELLQSAMRYYFKGI------ 176 Query: 190 KRTDVIVLACTHYPLIVH 207 + D ++LACTH+PL+ + Sbjct: 177 ETPDALILACTHFPLLAN 194 >gi|257791702|ref|YP_003182308.1| glutamate racemase [Eggerthella lenta DSM 2243] gi|257475599|gb|ACV55919.1| glutamate racemase [Eggerthella lenta DSM 2243] Length = 303 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 32/222 (14%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 + DN P I +FDSG GGL V +++ +P +Y+ D PYG + Sbjct: 18 RFDNAP--------IGVFDSGFGGLTVAREIAKELPRESIVYLGDSARCPYGPRSLDEVD 69 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 + + + ++++ L VIACNTA + TFP + +G V P + AA T++ Sbjct: 70 GFVQQIGAWLVERGVK-LVVIACNTATAAGLSHAQRTFP-VPVIGVVEPGARAAAHATKN 127 Query: 121 GLISILSTPATLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-- 177 + +++T AT+ YT + H V S VE G+++ E I+ Sbjct: 128 RRVGVIATKATVESDAYTKAIRHLDAGIT----VFSTATPRFVEIAEQGLRMAEGPIEDF 183 Query: 178 -------------KEIEGCFIEKEGK-RTDVIVLACTHYPLI 205 +EI ++E + D +VL CTH+PL+ Sbjct: 184 TSLVSTVYIRPAFQEIAREYLEPLRRCDIDTLVLGCTHFPLL 225 >gi|197693858|gb|ACH71598.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L V+ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIKLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|138896233|ref|YP_001126686.1| glutamate racemase [Geobacillus thermodenitrificans NG80-2] gi|134267746|gb|ABO67941.1| Glutamate racemase [Geobacillus thermodenitrificans NG80-2] Length = 209 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 7/199 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + VIACNTA ++ DE+R+ + LG V P + A T++G I ++ T Sbjct: 5 LQQYPLKMLVIACNTATAVVLDEVRAKL-DIPVLGVVHPGARAALKATKNGHIGVIGTVG 63 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R + S + H+ ++ VE + ++ + + Sbjct: 64 TVRSKAYEKALQSINPRVHVESLACPKFVPLVESG----DFEGEKALAIVAESLAPLRPR 119 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 DV++L CTHYPL+ + R+ V + + D AR +L + T + +H Sbjct: 120 PIDVLILGCTHYPLLAPLIREYMGKKVKLICSGDETAREVSAILHHSHLLYTGGCEPEHL 179 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G ++ + + FG Sbjct: 180 FFTTGSKELFEKISRKWFG 198 >gi|312796622|ref|YP_004029544.1| glutamate racemase [Burkholderia rhizoxinica HKI 454] gi|312168397|emb|CBW75400.1| Glutamate racemase (EC 5.1.1.3) [Burkholderia rhizoxinica HKI 454] Length = 202 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 8/150 (5%) Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154 LR P M +G P IK AA +++ + +L+T +TL+ + L+ Y C + Sbjct: 2 LRERLP-MPIIGVEPGIKPAALQSRTRVAGVLATASTLKSARFNALLAQYGGDCRFVCQA 60 Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 L +E G + + + + C D++VL CTHYP ++ R ++ Sbjct: 61 GHGLVDAIEAGDIGSPV----VMQRLAACLQPILDASADILVLGCTHYPFLLDAVRTITA 116 Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + +D ++IAR+ L+ R+ Q RV Sbjct: 117 DRLHVIDTGEAIARQ---LVRRLTDQQLRV 143 >gi|1752702|gb|AAC44708.1| Glr [Helicobacter pylori] Length = 255 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693860|gb|ACH71599.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKRQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|254304280|ref|ZP_04971638.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324472|gb|EDK89722.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 257 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + N I +FD+G+G +++ ++ P+ IY AD FPYG L K ++ D Sbjct: 1 MNNPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRRSFPYGAKTTEEL-KNIIENSIDF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126 L K ++A N + D+++ +G P +K + + I + Sbjct: 60 LLKKGASFIILASNAPSITVLDKIKKK---DKVIGIYPPLKDVINDKKKNTLIIGAKVMI 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +P + Y + + Q H+ S +I ++ ++ E IK I+ C E Sbjct: 117 DSPEL--QEYIKKEVGDFYKQFHVENASPLIQLIESGDFINNVEETEKTIKNFIDNC--E 172 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 + + D I L+ TH P + F+++ P D +DS+ + R P I T + +V+ Sbjct: 173 NKFGKLDSITLSSTHLPWLSSYFKKIIPQ-AKLYDPADSLVKAIR---PYITTGEGKVY 227 >gi|197693560|gb|ACH71449.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693550|gb|ACH71444.1| glutamate racemase [Helicobacter pylori] gi|197693776|gb|ACH71557.1| glutamate racemase [Helicobacter pylori] gi|197693778|gb|ACH71558.1| glutamate racemase [Helicobacter pylori] gi|197693780|gb|ACH71559.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFAPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 +VI+L CTH+PLI RQ+ + Sbjct: 173 LPEVIILGCTHFPLIA---RQIEGY 194 >gi|223043787|ref|ZP_03613830.1| glutamate racemase [Staphylococcus capitis SK14] gi|222442884|gb|EEE48986.1| glutamate racemase [Staphylococcus capitis SK14] Length = 266 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 105/254 (41%), Gaps = 25/254 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGDEVKQFTTEIAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L++ P + +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQTLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189 T++ I +++ V+ VE+ ++ + I I + Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQ----MRYNDPTITSIVIHQTLKQWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPV-DWLDNSDSI-------ARRARCLLPRINTHQ 241 D ++L CTHYPL+ P+ D+ D ++ AR LL N H Sbjct: 175 SDADTVILGCTHYPLLYK--------PIYDYFDGEKTVISSGLETAREVSALLTFSNEHA 226 Query: 242 TRV-FDDHALFLSG 254 + H F +G Sbjct: 227 SYTEHPKHRFFATG 240 >gi|163746582|ref|ZP_02153940.1| glutamate racemase, putative [Oceanibulbus indolifex HEL-45] gi|161380467|gb|EDQ04878.1| glutamate racemase, putative [Oceanibulbus indolifex HEL-45] Length = 269 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 52/226 (23%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-----HALKKRLMFL 67 ++ IFDSG+GGL V K++ +PE F+Y+AD PYG N +D A +RL Sbjct: 2 AVGIFDSGLGGLTVWNKVQERLPEVDFVYLADSAHAPYGVRNADDIYNLTCAAVQRLFDA 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG---- 121 D++ ++ACNTA ++ + LG + +A Q G Sbjct: 62 GCDLV--------ILACNTASAAALRRMQEGWIPREKRVLGVFVPLIEAMTERQWGDNSP 113 Query: 122 -------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG------ 168 +++ +TPAT+ S+ +S + VE ACG Sbjct: 114 PREVAVNHVALFATPATV------------ASRAFQRELSFRAIGVDVEAQACGGVVDAI 161 Query: 169 ----IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + + E ++ ++ ++++ D +L CTHYPL+ F+ Sbjct: 162 EEGDMILAEALVRSHVDA--LKRKMPNPDAAILGCTHYPLMQEAFQ 205 >gi|326781027|ref|ZP_08240292.1| Glutamate racemase [Streptomyces cf. griseus XylebKG-1] gi|326661360|gb|EGE46206.1| Glutamate racemase [Streptomyces cf. griseus XylebKG-1] Length = 256 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 11/193 (5%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSGIG L +R L P+ + +D P+G + + + ++P Sbjct: 1 MDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDITALALDVAR-AAAAHRPD 59 Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 ++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT Y Sbjct: 60 ALIVACNTASVHALPALRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTGSPYQ 117 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 LI + + V LA +E E I + + + +VL Sbjct: 118 RGLIGDFGGTADVTEVPCPGLADALEHG------DEAGIDRAVAAAAALTP-RDVRAVVL 170 Query: 198 ACTHYPLIVHVFR 210 CTHY L+ R Sbjct: 171 GCTHYELVAARIR 183 >gi|116493005|ref|YP_804740.1| glutamate racemase [Pediococcus pentosaceus ATCC 25745] gi|730082|sp|Q08783|MURI_PEDPE RecName: Full=Glutamate racemase gi|122265531|sp|Q03ES4|MURI_PEDPA RecName: Full=Glutamate racemase gi|349029|gb|AAA16761.1| glutamate racemase [Pediococcus pentosaceus] gi|435999|gb|AAC36914.1| glutamate racemase [Pediococcus pentosaceus] gi|116103155|gb|ABJ68298.1| glutamate racemase [Pediococcus pentosaceus ATCC 25745] Length = 265 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 13/203 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++ + L+P I++ D+ PYG + + Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKTAQKLLPNEEIIFIGDEARMPYGPRPTAEVVE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + S ++ K L VIACNTA L++ P +P A T++ Sbjct: 53 FSRQMASFLMTKNIKAL-VIACNTATNAALAVLQAELPIPVIGVILPGAIAANRQTKNQK 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +++T T++ S +++ + L + + E A ++ +K + Sbjct: 112 IGVIATLGTIK----SEAYPKALAEINTKLRAYPVACQEFVEIAEKNELHTTAAQKVMNE 167 Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205 E + D ++L CTH+PL+ Sbjct: 168 KLAEFRQDQIDTLILGCTHFPLL 190 >gi|33435087|gb|AAP39987.2| glutamate racemase [Helicobacter acinonychis] Length = 255 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FD+G+GG VL+ + IY D PYG +D A K+ D + Sbjct: 3 IGVFDTGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDSATIKQFSLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L + ++ S P + + ++ AIKQ + ++ +L T AT+ Sbjct: 62 EIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKDKNTPIL-VLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 R + N + Y++ H+ ++ + +EE + E E+ + + Sbjct: 121 RSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NVLEGELLETCMRYYFAPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 FPEVIILGCTHFPLIAQ 189 >gi|330685733|gb|EGG97369.1| glutamate racemase [Staphylococcus epidermidis VCU121] Length = 265 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 9/246 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + Sbjct: 1 MNRPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRSGEEVKQFTTEIAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ P + +G + P + A T++ + IL T Sbjct: 61 VE-FDIKMLVIACNTATAVALEHLQKILP-IPVIGVIEPGARTAIMTTKNQNVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189 T++ I ++ ++ VE+ ++ + I I + Sbjct: 119 TIKSEAYRKHIKRINPNVEVYGIACPGFVPLVEQ----MRYNDPTITSIVIHQTLKQWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248 D ++L CTHYPL+ + + AR LL N H + H Sbjct: 175 SEADTVILGCTHYPLLYKPINDYFGGKKTVISSGLETAREVSALLTFSNEHASYTQHPPH 234 Query: 249 ALFLSG 254 F +G Sbjct: 235 RFFATG 240 >gi|257468491|ref|ZP_05632585.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|317062751|ref|ZP_07927236.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|313688427|gb|EFS25262.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] Length = 263 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 14/204 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-HALKKRLMFLFS 69 ++SI IFDSGIGGL +L+K+R L+P + IY D PY + ED L ++M Sbjct: 4 ESSIGIFDSGIGGLTILKKIRELLPRENIIYYGDWKNNPYSEKSKEDIQNLSAKIM---- 59 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILST 128 D L + VI C+ D L++ + + +G + +K A ++ I+++ + Sbjct: 60 DFLIRNNCKAVVIGCSIFSAASLDFLKAQYK-IPIIGMIEGGVKSAILESKQKKIAVMGS 118 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ I + ++ +S L + +E+ G + D I E+ ++ + Sbjct: 119 AFTIKSNVYEKSIKEINPEITVYQISCKALCTMLEK---GWENYSDRI--EVLESYLCQI 173 Query: 189 GKRTDVIVLACTHYPLIVHVFRQL 212 D ++L THYP I++ ++ Sbjct: 174 PDTADTLILGGTHYPFILNDIKKF 197 >gi|217077581|ref|YP_002335299.1| glutamate racemase [Thermosipho africanus TCF52B] gi|217037436|gb|ACJ75958.1| glutamate racemase [Thermosipho africanus TCF52B] Length = 263 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 114/254 (44%), Gaps = 30/254 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGG+ VL+K+ ++ H+IY+AD PYG L + +F F++ K Sbjct: 3 IGLFDSGIGGISVLKKLTYINGA-HYIYIADTERAPYGIKTPEVL-ESFIFEFAEFFHKK 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-LSTPATLRR 134 ACNT ++I + ++ + + + A QA + G+I ++ + + Sbjct: 61 GVNEIFAACNTTDSIILE--KNLDLGIKYNSIIKAAIQAPKSEKVGVIGTNITVSNGIYK 118 Query: 135 TY---TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 Y + ++ +Q + LV I R+ E + + K Sbjct: 119 KYLEMENKEVYQKSTQLFVSLVEEGIFYGRMVEAIANY-------------YLLPLKKKN 165 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 + ++L CTH+P + V ++ P V +D ++ ++++ L + N+ + V + Sbjct: 166 IEELILGCTHFPFLKGVISRVLP-KVRIIDPAEELSKK----LAKNNSKKAFV----EFY 216 Query: 252 LSGKPDIAMRRLMQ 265 ++G P + ++L + Sbjct: 217 VTGDPKVFEKKLKR 230 >gi|307637232|gb|ADN79682.1| glutamate racemase [Helicobacter pylori 908] gi|325995823|gb|ADZ51228.1| Glutamate racemase [Helicobacter pylori 2018] gi|325997417|gb|ADZ49625.1| Glutamate racemase [Helicobacter pylori 2017] Length = 255 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693712|gb|ACH71525.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|317487823|ref|ZP_07946416.1| Asp/Glu/Hydantoin racemase [Eggerthella sp. 1_3_56FAA] gi|325830581|ref|ZP_08164002.1| glutamate racemase [Eggerthella sp. HGA1] gi|316913098|gb|EFV34614.1| Asp/Glu/Hydantoin racemase [Eggerthella sp. 1_3_56FAA] gi|325487327|gb|EGC89769.1| glutamate racemase [Eggerthella sp. HGA1] Length = 303 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 32/222 (14%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 + DN P I +FDSG GGL V +++ +P +Y+ D PYG + Sbjct: 18 RFDNAP--------IGVFDSGFGGLTVAREIAKELPRESIVYLGDSARCPYGPRSLDEVD 69 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 + + + ++++ L VIACNTA + TFP + +G V P + AA T++ Sbjct: 70 GFVQQIGAWLVERGVK-LVVIACNTATAAGLAHAQRTFP-VPVIGVVEPGARAAAHATKN 127 Query: 121 GLISILSTPATLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-- 177 + +++T AT+ YT + H V S VE G+++ E I+ Sbjct: 128 RRVGVIATKATVESDAYTKAIRHLDAGIT----VFSTATPRFVEIAEQGLRMAEGPIEDF 183 Query: 178 -------------KEIEGCFIEKEGK-RTDVIVLACTHYPLI 205 +EI ++E + D +VL CTH+PL+ Sbjct: 184 TSLVSTVYIRPAFQEIAREYLEPLRRCDIDTLVLGCTHFPLL 225 >gi|197693608|gb|ACH71473.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 173 LPEVVILGCTHFPLIAQ 189 >gi|197693592|gb|ACH71465.1| glutamate racemase [Helicobacter pylori] gi|197693838|gb|ACH71588.1| glutamate racemase [Helicobacter pylori] gi|197693840|gb|ACH71589.1| glutamate racemase [Helicobacter pylori] gi|197693842|gb|ACH71590.1| glutamate racemase [Helicobacter pylori] gi|197693844|gb|ACH71591.1| glutamate racemase [Helicobacter pylori] gi|197693846|gb|ACH71592.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693642|gb|ACH71490.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|261838209|gb|ACX97975.1| glutamate racemase [Helicobacter pylori 51] Length = 255 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 38/251 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 A ++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 AMIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231 +V++L CTH+PLI LS P V++L ++ + A Sbjct: 170 LEILPEVVILGCTHFPLIAQKIEGYFMEHFALSAPPLLIHSGDAIVEYLHQKYALKKNA- 228 Query: 232 CLLPRINTHQT 242 C P++ H + Sbjct: 229 CAFPKVEFHAS 239 >gi|16127933|ref|NP_422497.1| glutamate racemase [Caulobacter crescentus CB15] gi|221236753|ref|YP_002519190.1| glutamate racemase [Caulobacter crescentus NA1000] gi|13425469|gb|AAK25665.1| glutamate racemase, putative [Caulobacter crescentus CB15] gi|220965926|gb|ACL97282.1| glutamate racemase [Caulobacter crescentus NA1000] Length = 289 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/282 (24%), Positives = 107/282 (37%), Gaps = 41/282 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSDI 71 I +FDSG+GGL V + + +P+ F Y+AD PYG + ED K + LF Sbjct: 9 IGVFDSGVGGLSVHRALVQRLPQADFTYLADQANAPYGVRSGEDIVELTKAGCIRLF--- 65 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF---------PSMAFLG-AVPAIKQAAAYTQS- 120 + L V+ACNTA + L+ T+ + LG VP I++A Sbjct: 66 --ERGASLVVLACNTASAIALRRLQQTWLPDYRKDIGRPVNILGIIVPTIEKATGLPWEH 123 Query: 121 ------------GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168 ++ + +T AT+R I + + L +E A Sbjct: 124 EAERRGEMVQALDILGVFATQATVRSRVYEIEIDKRKQDLAVFSEACPELVPLIEGDASV 183 Query: 169 IKIKEDEIKKEIEG---CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 + EI K +EG + G+ D +VL CTHY +I +FR P + + Sbjct: 184 V-----EIAKAVEGHVQALKTRIGRYPDRVVLGCTHYEIIADIFRAALPAGTPLIQQPAA 238 Query: 226 IARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 A L R + +G P L+Q F Sbjct: 239 TAEGLALYLERHPEYDVGAGGGRVFLTTGTPG-PQNGLVQSF 279 >gi|254462580|ref|ZP_05075996.1| glutamate racemase [Rhodobacterales bacterium HTCC2083] gi|206679169|gb|EDZ43656.1| glutamate racemase [Rhodobacteraceae bacterium HTCC2083] Length = 270 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 46/218 (21%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70 ++ +FDSG+GGL VL R +P+ F+Y AD PYG + ED KK + +L+++ Sbjct: 2 AVGVFDSGLGGLTVLDAARARLPDVPFVYYADSAHAPYGVRDSEDIYQRTKKAVGYLWAN 61 Query: 71 ILDKYQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG------- 121 D L ++ACNT A L + + LG + +A + G Sbjct: 62 GCD-----LVILACNTASAAALRRMQEAGVPKGKRVLGVFVPLIEALTEREWGDNSPPRE 116 Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--------- 168 ++I +TPAT+ S+ ++ + VE ACG Sbjct: 117 VAVKEVAIFATPATI------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG 164 Query: 169 -IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 + + E ++ +E ++++ +L CTHYPL+ Sbjct: 165 DMILAEALVRSHVEA--LKRKMPEPQAAILGCTHYPLM 200 >gi|260428076|ref|ZP_05782055.1| glutamate racemase [Citreicella sp. SE45] gi|260422568|gb|EEX15819.1| glutamate racemase [Citreicella sp. SE45] Length = 270 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 20/211 (9%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL + +PE F+Y AD PYG + + L D L Sbjct: 2 AVGVFDSGLGGLTVLDAVSKRLPEVPFVYFADSAHAPYGVRDADDIYN-LTTAAVDRLWH 60 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ T+ LG + +A Q G Sbjct: 61 AGCDLVILACNTASAAALRRMQETWIPRDKRVLGVFVPLIEAMTERQWGDNSPPREVGVQ 120 Query: 122 LISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +++ +TPAT+R R + L + + + L +EE + + E ++ + Sbjct: 121 HVALFATPATVRSRAFQRELAFRAIG-VDVEAQACGGLVDAIEE--GDMILAEALVRSHV 177 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 + ++++ + +L CTHYPL+ +F++ Sbjct: 178 DA--LKRKMPEPEAAILGCTHYPLMEDIFQE 206 >gi|295108801|emb|CBL22754.1| glutamate racemase [Ruminococcus obeum A2-162] Length = 272 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 23/234 (9%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD--KY 75 +FDSG+GGL V +++ +P +Y D PYG+ K ++ S I+ + Sbjct: 10 VFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKS----KDTVIRYSSQIVHFLRE 65 Query: 76 QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133 Q V + VIACNTA + ++ + LG + A + AA T++ + ++ T T+ Sbjct: 66 QNVKAIVIACNTASAFALEAVQDKL-DIPVLGVIEAGARVAAEETKNKRVGVIGTVGTV- 123 Query: 134 RTYTSNLIHSYVSQCHIHLV----SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188 S + SY+ + + + + VEE D + E+ ++++ + Sbjct: 124 ---GSGIHESYLKRLDPEITVIGKACPLFVPLVEEGWL-----HDPVTVEVASRYLQELK 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 ++ D ++L CTHYPLI +++ V ++ + A + LL +++ T Sbjct: 176 DEQVDTLILGCTHYPLIRSTIQEVMGEKVRLVNPAYETALELKSLLTKMDLLST 229 >gi|242310721|ref|ZP_04809876.1| glutamate racemase [Helicobacter pullorum MIT 98-5489] gi|239523119|gb|EEQ62985.1| glutamate racemase [Helicobacter pullorum MIT 98-5489] Length = 253 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 19/197 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS----DI 71 I +FDSG+GG+ VL+ + IY D PYG K + +S + Sbjct: 6 IGVFDSGVGGISVLKSLIDSDSFEEIIYYGDTARVPYG-----VRSKETIIQYSLEALEF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY--TQSGLISILST 128 ++ L V+ACNT D ++ F + +G + P + ++ I IL T Sbjct: 61 FKQFNLDLLVVACNTISAYALDSMQK-FANYPIVGVIEPGVLALTNNLDNKNANILILGT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ NL+H+ +I+ +++ + VEE I E EI + + + Sbjct: 120 KATINSNLYQNLLHTQ-GYTNINGLATSLFVPIVEE-----GIFEGEILESTMKYYFKDY 173 Query: 189 GKRTDVIVLACTHYPLI 205 + D I+L CTH+PLI Sbjct: 174 KESPDAIILGCTHFPLI 190 >gi|318076535|ref|ZP_07983867.1| glutamate racemase [Streptomyces sp. SA3_actF] Length = 136 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 10/139 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + RL ++ Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDI-TRLALGAAEAAAAL 61 Query: 76 QPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +P V+ACNTA T LR+ TFP +G VPAIK AAA+ ++I +TPAT Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFP---VIGTVPAIKPAAAFGAP--VAIWATPAT 116 Query: 132 LRRTYTSNLIHSYVSQCHI 150 Y LI + ++ Sbjct: 117 TGSEYQRRLIAEFAPGGNV 135 >gi|15611563|ref|NP_223214.1| glutamate racemase [Helicobacter pylori J99] gi|11133705|sp|Q9ZLT0|MURI_HELPJ RecName: Full=Glutamate racemase gi|151567728|pdb|2JFX|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate gi|151567729|pdb|2JFX|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate gi|151567730|pdb|2JFZ|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|151567731|pdb|2JFZ|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|168177008|pdb|2JFY|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate gi|168177009|pdb|2JFY|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate gi|217035286|pdb|2W4I|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|217035287|pdb|2W4I|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|217035288|pdb|2W4I|E Chain E, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|217035289|pdb|2W4I|F Chain F, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|4155036|gb|AAD06074.1| GLUTAMATE RACEMASE [Helicobacter pylori J99] Length = 255 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 36/250 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T Sbjct: 59 KPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----SILEGELLETCMHYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIA---------RRARC 232 +VI+L CTH+PLI P P + + D+I + C Sbjct: 170 LEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNAC 229 Query: 233 LLPRINTHQT 242 P++ H + Sbjct: 230 TFPKVEFHAS 239 >gi|197693820|gb|ACH71579.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L V+ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693814|gb|ACH71576.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDS +GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSSVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE G ++ E ++ I E Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKILPE-- 175 Query: 191 RTDVIVLACTHYPLIVH 207 VI+L CTH+PLI Sbjct: 176 ---VIILGCTHFPLIAQ 189 >gi|30961743|gb|AAP39988.1| glutamate racemase [Helicobacter acinonychis] Length = 232 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FD+G+GG VL+ + IY D PYG +D A K+ D + Sbjct: 3 IGVFDTGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDSATIKQFSLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L + ++ S P + + ++ AIKQ + ++ +L T AT+ Sbjct: 62 EIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKDKNTPIL-VLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 R + N + Y++ H+ ++ + +EE + E E+ + + Sbjct: 121 RSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NVLEGELLETCMRYYFAPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 FPEVIILGCTHFPLIAQ 189 >gi|315658541|ref|ZP_07911413.1| glutamate racemase [Staphylococcus lugdunensis M23590] gi|315496870|gb|EFU85193.1| glutamate racemase [Staphylococcus lugdunensis M23590] Length = 269 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 25/256 (9%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + I + DSG+GGL V +++ +P Y+ D PYG +K L + Sbjct: 2 KNMNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDIARCPYGPRPGEEVKAFTTELAN 61 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128 +++ + + VIACNTA + + L+ S+ +G + P + A T++ + IL T Sbjct: 62 KLME-FDIKMLVIACNTATAVALEHLQHIL-SIPVIGVIEPGARTAIMTTKNQHVLILGT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKIKEDEIK---KEIEGCF 184 T++ S+ + H + + V AC G ++++ I Sbjct: 120 EGTIK------------SEAYRHHIKRINPNVEVTGVACPGFVPLVEQMRYNDPTITSII 167 Query: 185 IEKEGKR-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 I + K D ++L CTHYPL+ + + AR LL N Sbjct: 168 IHQTLKHWRNSIADTVILGCTHYPLLYQPLNDYFGGDKTVISSGLETAREVSALLTFSNE 227 Query: 240 HQTRVFD-DHALFLSG 254 H + H F +G Sbjct: 228 HASYTAQPQHRFFSTG 243 >gi|33433444|gb|AAP39989.2| glutamate racemase [Helicobacter acinonychis] Length = 255 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FD+G+GG VL+ + + IY D PYG +D A K+ D + Sbjct: 3 IGVFDTGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDSATIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L + ++ S P + + ++ AIKQ + ++ +L T AT+ Sbjct: 62 EIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKDKNTPIL-VLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFAPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 FPEVIILGCTHFPLIAQ 189 >gi|256832123|ref|YP_003160850.1| glutamate racemase [Jonesia denitrificans DSM 20603] gi|256685654|gb|ACV08547.1| glutamate racemase [Jonesia denitrificans DSM 20603] Length = 268 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 14/222 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GGL V + + +P Y+ D PYG + AL + L D L Sbjct: 3 DSPIGIFDSGVGGLTVARSILDQLPGESITYIGDTANTPYGP-KPLALVRELALTIMDRL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILST 128 + VIACNTA + + R + + V PA ++A A T++G I ++ T Sbjct: 62 VDDGVKMLVIACNTASAAVLRDARERYTVGRGIPVVEVILPAARRAVAATRTGKIGVIGT 121 Query: 129 PATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT+ R Y L S VSS+ VE GI I+ +++ Sbjct: 122 QATVASRAYDDAL-----SVAADLTVSSVACPDFVELVEAGITTGPRVIEAATR--YLDS 174 Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + D ++L CTHYPL+ + V + +++ A+ Sbjct: 175 LKHHDVDTLILGCTHYPLLTGAISYVMGEDVTLVSSAEETAK 216 >gi|197693582|gb|ACH71460.1| glutamate racemase [Helicobacter pylori] gi|197693602|gb|ACH71470.1| glutamate racemase [Helicobacter pylori] gi|197693604|gb|ACH71471.1| glutamate racemase [Helicobacter pylori] gi|197693618|gb|ACH71478.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDETIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNT L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILESELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|317013968|gb|ADU81404.1| glutamate racemase [Helicobacter pylori Gambia94/24] Length = 255 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T Sbjct: 59 KPHEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTP 169 Query: 188 EGKRTDVIVLACTHYPLIVH 207 VI+L CTH+PLI Sbjct: 170 LKILPKVIILGCTHFPLIAQ 189 >gi|197693640|gb|ACH71489.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 15/195 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMHYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLI 205 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLI 187 >gi|197693578|gb|ACH71458.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFAPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 VI+L CTH+PLI RQ+ + Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194 >gi|197693546|gb|ACH71442.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|197693590|gb|ACH71464.1| glutamate racemase [Helicobacter pylori] gi|197693782|gb|ACH71560.1| glutamate racemase [Helicobacter pylori] gi|197693784|gb|ACH71561.1| glutamate racemase [Helicobacter pylori] gi|197693786|gb|ACH71562.1| glutamate racemase [Helicobacter pylori] gi|197693788|gb|ACH71563.1| glutamate racemase [Helicobacter pylori] gi|197693790|gb|ACH71564.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFAPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 VI+L CTH+PLI RQ+ + Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194 >gi|256002758|gb|ACU52624.1| glutamate racemase [Bacillus licheniformis] Length = 250 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/224 (20%), Positives = 97/224 (43%), Gaps = 7/224 (3%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 +P+ + IYV D PYG + + + L + +L+ + + VIACNTA + D++ Sbjct: 4 LPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIALDDI 63 Query: 96 RSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154 + + + +G + P + A T + I ++ T T++ + + + ++ Sbjct: 64 QRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVENLA 122 Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 +L VE K ++ +K + + D ++L CTHYP++ ++ Sbjct: 123 CPLLVPFVESGKFLDKTADEIVKTSL----YPLKDTSIDSLILGCTHYPILKEAIQRYMG 178 Query: 215 WPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSGKPD 257 V+ + + D AR +L +Q+ + DH +G D Sbjct: 179 EHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQFLTTGARD 222 >gi|332982127|ref|YP_004463568.1| glutamate racemase [Mahella australiensis 50-1 BON] gi|332699805|gb|AEE96746.1| glutamate racemase [Mahella australiensis 50-1 BON] Length = 268 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 23/230 (10%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE-DHALK 61 +DN P I +FDSG+GGL V++++ +P +Y D PYG D +K Sbjct: 1 MDNRP--------IGVFDSGVGGLTVVKEIMKQLPAEDIVYFGDTARVPYGTRSRDTVIK 52 Query: 62 ---KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY- 117 + + FL S + V+ACNTA + + + F + LG + AA + Sbjct: 53 FTLQSVRFLMSQGIKAV-----VLACNTASAISLEVAQQQF-DVPILGVIEGGAIAAVHA 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T++ I ++ T T+ I + VEE +I + Sbjct: 107 TKNKRIGVIGTEGTINSGAYERAIKLLDDSIETFAKPCPLFVPLVEEGLQDSEIAYMAAR 166 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + + F E G D +++ CTHYPL+ + R+ V ++ ++ A Sbjct: 167 EYLS--FFEDTG--IDTLLMGCTHYPLMANTIRRAVGTGVKLINPAEKTA 212 >gi|197693556|gb|ACH71447.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 VI+L CTH+PLI RQ+ + Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194 >gi|197693554|gb|ACH71446.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 VI+L CTH+PLI RQ+ + Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194 >gi|283853806|ref|ZP_06371029.1| glutamate racemase [Desulfovibrio sp. FW1012B] gi|283570810|gb|EFC18847.1| glutamate racemase [Desulfovibrio sp. FW1012B] Length = 268 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 20/205 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y D PYG + + + +L K Sbjct: 9 IGIFDSGVGGLTVARAVMDRLPHESIVYFGDTARVPYGVKSPDTVARYAAQITRFLLAKD 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-------KQAAAYTQSGLISILST 128 +L ++ACNT + P++ L VP I + A A T++ I I++T Sbjct: 69 VKLL-IVACNTMAAV-------ALPAITALSPVPVIEVIDAGARSALAATRTKRIGIIAT 120 Query: 129 PATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 P+T+ R Y L H + + VEE + + E Sbjct: 121 PSTIASRAYERALTTLGGPGVHTASRACPLFVPLVEEG----WLDHPATRLVAEEYLAPL 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQL 212 D ++L CTHYPL+ + ++ Sbjct: 177 LAYDLDTLILGCTHYPLLAPLLARV 201 >gi|206901151|ref|YP_002251063.1| glutamate racemase [Dictyoglomus thermophilum H-6-12] gi|206740254|gb|ACI19312.1| glutamate racemase [Dictyoglomus thermophilum H-6-12] Length = 266 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 14/205 (6%) Query: 16 ILIFDSGIGGLIVLQKMRF--LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I I DSG+GGL VL+++ F L E +F+ D FPYG +++R+ + S Sbjct: 4 IGILDSGVGGLSVLKEVYFNNLADEVYFL--GDTKYFPYGIKPVEFIQERVFEIVS-FFK 60 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAF----LGAVPAIKQAAAYTQSGLISILSTP 129 + ++ACNTA ++ D L F + LGA+ IK +YT + +L+T Sbjct: 61 NFGVEEVIVACNTASSVAYDFLVDNFRDIKIHSIVLGAIEGIK---SYTFKK-VGVLATK 116 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T NLIH +S+ V S +E GI ++ + I+KEI C Sbjct: 117 RTKESNIYPNLIHERISKNVEVYVQSCSEGPLLETIEKGI-VEGEIIEKEIIKCTDPLVE 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSP 214 + ++L CTH P I V + L P Sbjct: 176 NGIEGLILGCTHLPFIKGVIKNLYP 200 >gi|81428019|ref|YP_395018.1| glutamate racemase [Lactobacillus sakei subsp. sakei 23K] gi|123564670|sp|Q38YM1|MURI_LACSS RecName: Full=Glutamate racemase gi|78609660|emb|CAI54706.1| Glutamate racemase [Lactobacillus sakei subsp. sakei 23K] Length = 274 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/199 (20%), Positives = 90/199 (45%), Gaps = 13/199 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I DSG+GGL ++++ R +P +++ D PYG + A + + ++ L Sbjct: 6 IGFMDSGVGGLTLVKEARKRLPNEDMVFIGDQARLPYGE-KPAATVREFAWQMANFLRHQ 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA +L++ ++ +G + P A T + + +++T T++ Sbjct: 65 EIKALVIACNTATAAALPDLQAQL-AIPVIGVIKPGSIAALQTTHNRRVGVIATTGTIQS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKR 191 S + + + +++ + +E + ++ ++I + ++ I Sbjct: 124 AAYSQQMAALNPDVQVTGLAAPQFVTMIEANQRHGQAVQTIVNQILQPLQKSEI------ 177 Query: 192 TDVIVLACTHYPLIVHVFR 210 D +VL CTH+PL+ + Sbjct: 178 -DTLVLGCTHFPLLTTAIQ 195 >gi|197693802|gb|ACH71570.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE G ++ E ++ I Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKI----- 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215 VI+L CTH+PLI RQ+ + Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194 >gi|197693722|gb|ACH71530.1| glutamate racemase [Helicobacter pylori] gi|197693724|gb|ACH71531.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ + + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALNFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|86739585|ref|YP_479985.1| glutamate racemase [Frankia sp. CcI3] gi|86566447|gb|ABD10256.1| glutamate racemase [Frankia sp. CcI3] Length = 300 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 8/195 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P +Y+ D PYG +++ + ++D+ Sbjct: 6 IGVFDSGVGGLTVARAILDQLPHEPLMYLGDTARAPYGPRRIAEVRRYALDALDRLVDEG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134 +L VIACNTA + R + +PA ++AAA T+SG + ++ T AT+ R Sbjct: 66 VKLL-VIACNTASAACLRDARERYDIPVIEVIMPATRRAAAATRSGRVGVIGTLATIASR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++ + + L + A V+ GI ++ E + D Sbjct: 125 AYD----DAFTAAAGVELTGAACPAF-VDFVERGITCGR-QLLGLTEAYLAPLQEANVDT 178 Query: 195 IVLACTHYPLIVHVF 209 ++L CTHYPL+ V Sbjct: 179 VILGCTHYPLLTGVI 193 >gi|30961747|gb|AAP39990.1| glutamate racemase [Helicobacter acinonychis] Length = 232 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FD+G+GG VL+ + + IY D PYG +D A K+ D + Sbjct: 3 IGVFDTGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDSATIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L + ++ S P + + ++ AIKQ + ++ +L T AT+ Sbjct: 62 EIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKDKNTPIL-VLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFAPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 FPEVIILGCTHFPLIAQ 189 >gi|110680409|ref|YP_683416.1| glutamate racemase, putative [Roseobacter denitrificans OCh 114] gi|123172245|sp|Q163W3|MURI_ROSDO RecName: Full=Glutamate racemase gi|109456525|gb|ABG32730.1| glutamate racemase, putative [Roseobacter denitrificans OCh 114] Length = 269 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 38/220 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 S+ IFDSG+GGL VL ++ +P+ F Y+AD PYG + + + D Sbjct: 2 SVGIFDSGLGGLTVLDAVQTRLPDMPFAYLADSAHAPYGVRTADDIYDLTCQSVARLFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 GCN-LVILACNTASAAALRRMQESWVPEDKRVLGVFVPLIEAMTERQWGDNSPPREVGVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171 +++ +TPAT+ S+ ++ + VE ACG + + Sbjct: 121 HVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDMML 168 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 E ++ +E ++++ D +L CTHYPL+ +F++ Sbjct: 169 AEALVRSHVEA--LQRKMPTPDAAILGCTHYPLMQDIFQK 206 >gi|197693726|gb|ACH71532.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T A + Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKAMI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|326330807|ref|ZP_08197108.1| glutamate racemase [Nocardioidaceae bacterium Broad-1] gi|325951337|gb|EGD43376.1| glutamate racemase [Nocardioidaceae bacterium Broad-1] Length = 285 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 9/196 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL V + + + +YV D PYG +++ + ++++ Sbjct: 24 IGIFDSGFGGLTVARSVIDQLAHESILYVGDTARAPYGPRPIAEVREYALECLDHLVEQG 83 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 L VIACN+A + + R + + + + PA ++A A +++G I ++ T AT Sbjct: 84 VKAL-VIACNSASAAMLRDARERYKPLPVVEVILPATRRAVAASRTGRIGVICTHATAES 142 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTD 193 + ++ + H+ L + V G+ E+ + E +++ D Sbjct: 143 MAYDD---AFAAAPHVSL-HTRACPQFVPFVEAGVTGGEELLAAAHE--YLDPLTSAGVD 196 Query: 194 VIVLACTHYPLIVHVF 209 ++L CTHYPL+ V Sbjct: 197 TLILGCTHYPLLTGVI 212 >gi|138999530|dbj|BAF51348.1| glutamate recemase [Streptococcus mutans] gi|138999536|dbj|BAF51349.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 3/132 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K ++ Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKVKMI- 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118 Query: 140 LIHSYVSQCHIH 151 I Q + Sbjct: 119 KIRDLSPQMKVR 130 >gi|315080007|gb|EFT51983.1| glutamate racemase [Propionibacterium acnes HL078PA1] Length = 248 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 32/236 (13%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + + Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDRL 68 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + L +IACNTA + + + R + +PA ++A+A T++G I ++ T AT Sbjct: 69 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127 Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 R T T+ +V + S L + EY I+ Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 GC D ++L CTHYPL+ + + V + +S AR + L+ Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLM 225 >gi|323343637|ref|ZP_08083864.1| glutamate racemase [Prevotella oralis ATCC 33269] gi|323095456|gb|EFZ38030.1| glutamate racemase [Prevotella oralis ATCC 33269] Length = 280 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 15/212 (7%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MK+ P I +FDSG GGL +L +R L+P Y ++Y+ D+ PYG+ + Sbjct: 1 MKLSQVP------GPIGVFDSGYGGLTILHGIRQLLPRYDYMYLGDNARAPYGSRSFDVV 54 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQA 114 + + + + L ++ CNTA T+ + +L LG + P + Sbjct: 55 YEFTRQAVAKLFE-MGCHLVILGCNTASAKALRTIQRQDLPVWDAERRVLGVIRPTAEVI 113 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 T+S + +L+T T+R I + V + +E + Sbjct: 114 GTLTKSRHVGLLATEGTVRSESYKLEIRKLYPDIKVTGVPCPLWVPIIENNEADSPGADY 173 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 ++K I + D I+L CTHYPL++ Sbjct: 174 FVQKSIHQLMTLD--PQIDTIILGCTHYPLLM 203 >gi|197693654|gb|ACH71496.1| glutamate racemase [Helicobacter pylori] gi|197693656|gb|ACH71497.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 27/203 (13%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + LD + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58 Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +P L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T Sbjct: 59 KPHEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTK 117 Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC---F 184 AT++ N + Y++ H+ ++ + +EE I E E+ +E C + Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGEL---LEACMRYY 166 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 167 FTPLKILPEVIILGCTHFPLIAQ 189 >gi|326693298|ref|ZP_08230303.1| glutamate racemase [Leuconostoc argentinum KCTC 3773] Length = 281 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 4/192 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N I DSG+GGL V++ + +P FI++ D PYG + + +L Sbjct: 5 NPIGFVDSGVGGLTVVKAAQDQLPHEQFIFIGDTARMPYGPRPVQEVIDYTFQMAQFLLT 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA +L++ P VP AAA T + I +++T T+ Sbjct: 65 VKHIKLLVIACNTATARALPQLQAQLPIPVIGVIVPGATAAAATTGNQKIGVIATQGTVT 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + I + + I + E +D + + + + D Sbjct: 125 SGAYQDEIQAVNADVTIFQQAEPDFVQLAEANLAQAATTKDIVAQHLASL----TAQGID 180 Query: 194 VIVLACTHYPLI 205 +VL CTH+PL+ Sbjct: 181 TLVLGCTHFPLL 192 >gi|329119913|ref|ZP_08248587.1| glutamate racemase [Neisseria bacilliformis ATCC BAA-1200] gi|327464069|gb|EGF10380.1| glutamate racemase [Neisseria bacilliformis ATCC BAA-1200] Length = 270 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 6/203 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q + +FDSG+GGL ++ + +P +Y D PYG ++ + +L Sbjct: 6 QCPVGVFDSGVGGLTNVRALMERLPMESIVYFGDTARVPYGVKSRATIEAFTAQIVGFML 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPAT 131 + L VIACNT + ++R +M L + + A A T++ I +++T T Sbjct: 66 EHDVKAL-VIACNTIAAVAGHKVRQMAGNMPVLDVISAGAEAALAATRNNHIGVIATNTT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + V+ + VEE ++ ++ ++ + Sbjct: 125 VNSNAYAREIHRKNPAARVQSVACPLFVPLVEEGWLDHEVTRLTAREYLKPILADT---- 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214 D +VL CTHYPL+ + + +P Sbjct: 181 ADTLVLGCTHYPLLKPLLHREAP 203 >gi|91070263|gb|ABE11182.1| putative aspartate and glutamate racemases:glutamate racemase [uncultured Prochlorococcus marinus clone HF10-11H7] Length = 264 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 17/216 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSGIGG +L + + Y+AD P+GN ++ + + +DK Sbjct: 7 IFDSGIGGFTILNSLLKTRQDVEVFYLADTKRIPFGNKNSKEIRLIAKEICTFFVDKNLD 66 Query: 78 VLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 L ++ACNT A +++D L+ P + +V I +I +L+T T+R Sbjct: 67 AL-LVACNTTNACALDILEDNLK--VPCFDLINSVSEI------VDKRIIGVLATQTTVR 117 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +Y I++ I S +E+ K+ D++ + K + Sbjct: 118 SSYYKKAINAKKESTIIFQQECPKFVSEIEKE----KLNLDKLNTLSDLYLRPLIIKNIE 173 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 ++L C+HYPLI R+ + +D S ++ ++ Sbjct: 174 ELILGCSHYPLIYDFLRKKLDSNIKIIDPSVALIKK 209 >gi|138998767|dbj|BAF51436.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K ++ Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKAKMI- 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIK 112 >gi|314933347|ref|ZP_07840712.1| glutamate racemase [Staphylococcus caprae C87] gi|313653497|gb|EFS17254.1| glutamate racemase [Staphylococcus caprae C87] Length = 266 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 25/254 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +++ + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGDEVRQFTTEIAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ P + +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQRLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189 T++ I +++ V+ VE+ ++ + I I + Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQ----MRYNDPTITSIVIHQTLKQWRN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPV-DWLDNSDSI-------ARRARCLLPRINTHQ 241 D ++L CTHYPL+ P+ D+ D ++ AR LL N H Sbjct: 175 SDADTVILGCTHYPLLYK--------PIYDYFDGEKTVISSGLETAREVSALLTFSNEHA 226 Query: 242 TRV-FDDHALFLSG 254 + H F +G Sbjct: 227 SYTEHPKHRFFATG 240 >gi|197693648|gb|ACH71493.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 VI+L CTH+PLI Sbjct: 173 LPKVIILGCTHFPLIAQ 189 >gi|189501895|ref|YP_001957612.1| hypothetical protein Aasi_0473 [Candidatus Amoebophilus asiaticus 5a2] gi|189497336|gb|ACE05883.1| hypothetical protein Aasi_0473 [Candidatus Amoebophilus asiaticus 5a2] Length = 260 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + N I IFDSG+GGL V + ++ L+P Y+ D PYG ++ + + D+ Sbjct: 1 MHNPIGIFDSGVGGLTVARAIKDLLPNESLYYIGDTANLPYGEKSTEQIQAYVKEI-GDV 59 Query: 72 LDKYQPVLSVIACNTAFT----LIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126 L K + VIAC+TA ++KD + P + + V A ++Q GLI Sbjct: 60 LLKQGCKVIVIACSTATAAAAEVLKDYIGDHIPVLNVIDPVIAYVRQHYMGKTLGLIGTQ 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T T TY L SQ +I+L +++ +L +E D+ +K I + Sbjct: 120 YTVNT--TTYVQKL---EASQANINLKCLATPLLVPMIE---------ADQYEKAILQGY 165 Query: 185 IEKEGKRTDV--IVLACTHYPLI 205 + E TD+ ++L CTHY LI Sbjct: 166 LS-EPILTDIKGLILGCTHYWLI 187 >gi|239905425|ref|YP_002952164.1| glutamate racemase [Desulfovibrio magneticus RS-1] gi|239795289|dbj|BAH74278.1| glutamate racemase [Desulfovibrio magneticus RS-1] Length = 270 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 36/209 (17%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GGL V + + L+P +Y D PYG + + + +L Sbjct: 5 NSPIGIFDSGVGGLTVARAVMELLPNEPVVYFGDTARVPYGVKSPDTVARYAAQITRFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK-------QAAAYTQSGLISI 125 +K +L ++ACNT + P++ + VP ++ A A T++ I I Sbjct: 65 EKNVKLL-IVACNTMAAV-------ALPAITNIAPVPVLEVIDAGAASALAATRTRRIGI 116 Query: 126 LSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEG 182 ++TP+T+ + Y L + + +H V+ AC + + E+ + Sbjct: 117 IATPSTVASQAYEQAL--ARLGGPDVHTVAK----------ACPLFVPLAEEGLTDHPAT 164 Query: 183 CFIEKE------GKRTDVIVLACTHYPLI 205 I E + D ++L CTHYPL+ Sbjct: 165 RLIAAEYLTPLAAENLDTLILGCTHYPLL 193 >gi|195536596|dbj|BAG68021.1| glutamate recemase [Streptococcus mutans] gi|195536598|dbj|BAG68022.1| glutamate recemase [Streptococcus mutans] gi|195536600|dbj|BAG68023.1| glutamate recemase [Streptococcus mutans] gi|195536602|dbj|BAG68024.1| glutamate recemase [Streptococcus mutans] gi|195536604|dbj|BAG68025.1| glutamate recemase [Streptococcus mutans] gi|195536606|dbj|BAG68026.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K ++ Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKVKMI- 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAIVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIK 112 >gi|310816545|ref|YP_003964509.1| Glutamate racemase [Ketogulonicigenium vulgare Y25] gi|308755280|gb|ADO43209.1| Glutamate racemase [Ketogulonicigenium vulgare Y25] Length = 270 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 58/228 (25%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--------NWEDHALKKRLMF 66 ++ +FDSG+GGL VL + +P+ +Y D+ PYG N A +K Sbjct: 2 AVGVFDSGLGGLTVLDAVAKRLPDLPLVYFGDNAHAPYGVRTSDDIYNLTVSATQK---- 57 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 LF + D L ++ACNTA ++ + VP K+ + + Sbjct: 58 LFDNGCD-----LVILACNTASAAALKRMQENW--------VPEGKRVLG------VFVP 98 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG--- 168 A R + N V+ H+ L ++ +ASR VE ACG Sbjct: 99 LIEALTERQWGDNTAPREVAVKHVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVV 158 Query: 169 -------IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209 + + E ++ +E ++++ R D +L CTHYPL+ VF Sbjct: 159 DAIEEGDLILAEALVRSHVEA--LKRKMPRPDAAILGCTHYPLMEKVF 204 >gi|254510376|ref|ZP_05122443.1| glutamate racemase [Rhodobacteraceae bacterium KLH11] gi|221534087|gb|EEE37075.1| glutamate racemase [Rhodobacteraceae bacterium KLH11] Length = 269 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 62/275 (22%), Positives = 108/275 (39%), Gaps = 42/275 (15%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y AD PYG + + + D+ Sbjct: 2 AVGIFDSGLGGLTVLNAAQKRLPDVDFLYYADSAHAPYGVRDAEDIYNLTRAAVQGLWDR 61 Query: 75 YQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNT A L + + LG + +A Q G Sbjct: 62 -GCNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVEVQ 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171 +++ +TPAT+ S+ ++ + VE ACG + + Sbjct: 121 HVALFATPATVS------------SRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDMIL 168 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 E ++ ++ ++++ +L CTHYPL+ F+Q V D + A Sbjct: 169 AEALVRGHVDA--LKRKMPEPQAAILGCTHYPLMAETFQQALGPHVKVYSQGDLV---AE 223 Query: 232 CLLPRINTHQTRVFDDHALFL-SGKPDIAMRRLMQ 265 L + H + + +L +GKP + R Q Sbjct: 224 SLADYLQRHPNMLGEGAGGYLTTGKPGVVTDRATQ 258 >gi|254463861|ref|ZP_05077272.1| glutamate racemase [Rhodobacterales bacterium Y4I] gi|206684769|gb|EDZ45251.1| glutamate racemase [Rhodobacterales bacterium Y4I] Length = 269 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 42/221 (19%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ DK Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVEFLYYGDNAHAPYGVRDAENIYQLTKAAMEDMWDK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L ++ACNTA ++ G +P K+ + + A R Sbjct: 62 GCD-LVILACNTASAAALRRMQE--------GGLPQGKRVLG------VFVPLIEALTER 106 Query: 135 TYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG----------I 169 + N V H+ L ++ +ASR VE ACG + Sbjct: 107 QWGDNSPPREVEVKHVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDM 166 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + E ++ ++ ++++ + +L CTHYPL+ F+ Sbjct: 167 ILAEALVRSHVDA--LKRKMPHPEAAILGCTHYPLMEQTFQ 205 >gi|56696751|ref|YP_167112.1| glutamate racemase [Ruegeria pomeroyi DSS-3] gi|81558534|sp|Q5LS93|MURI_SILPO RecName: Full=Glutamate racemase gi|56678488|gb|AAV95154.1| glutamate racemase [Ruegeria pomeroyi DSS-3] Length = 269 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 38/219 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL+ + +PE F+Y AD PYG + + D+ ++ Sbjct: 2 AVGIFDSGLGGLTVLEAAQKRLPEVEFLYYADSAHAPYGVRTPDDIFQLTRAAVHDLWNR 61 Query: 75 YQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNT A L + + P LG + +A Q G Sbjct: 62 GCD-LVILACNTASAAALRRMQEEGVPPGKRVLGVFVPLIEALTERQWGDNSPPREVEVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171 +++ +TPAT+ S+ ++ + VE ACG + + Sbjct: 121 NVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDLIL 168 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 E ++ ++ ++++ +L CTHYPL+ +F+ Sbjct: 169 AEALVRSHVDA--LKRKMPYPQAAILGCTHYPLMEPIFQ 205 >gi|138998500|dbj|BAF51362.1| glutamate recemase [Streptococcus mutans] gi|138998505|dbj|BAF51363.1| glutamate recemase [Streptococcus mutans] gi|138998507|dbj|BAF51364.1| glutamate recemase [Streptococcus mutans] gi|138998509|dbj|BAF51365.1| glutamate recemase [Streptococcus mutans] gi|138998515|dbj|BAF51366.1| glutamate recemase [Streptococcus mutans] gi|138998517|dbj|BAF51367.1| glutamate recemase [Streptococcus mutans] gi|138998519|dbj|BAF51368.1| glutamate recemase [Streptococcus mutans] gi|138998522|dbj|BAF51369.1| glutamate recemase [Streptococcus mutans] gi|138998524|dbj|BAF51370.1| glutamate recemase [Streptococcus mutans] gi|138998529|dbj|BAF51371.1| glutamate recemase [Streptococcus mutans] gi|138998531|dbj|BAF51372.1| glutamate recemase [Streptococcus mutans] gi|138998533|dbj|BAF51373.1| glutamate recemase [Streptococcus mutans] gi|138998536|dbj|BAF51374.1| glutamate recemase [Streptococcus mutans] gi|138998538|dbj|BAF51375.1| glutamate recemase [Streptococcus mutans] gi|138998545|dbj|BAF51376.1| glutamate recemase [Streptococcus mutans] gi|138998547|dbj|BAF51377.1| glutamate recemase [Streptococcus mutans] gi|138998549|dbj|BAF51378.1| glutamate recemase [Streptococcus mutans] gi|138998551|dbj|BAF51379.1| glutamate recemase [Streptococcus mutans] gi|138998557|dbj|BAF51380.1| glutamate recemase [Streptococcus mutans] gi|138998559|dbj|BAF51381.1| glutamate recemase [Streptococcus mutans] gi|138998565|dbj|BAF51382.1| glutamate recemase [Streptococcus mutans] gi|138998567|dbj|BAF51383.1| glutamate recemase [Streptococcus mutans] gi|138998573|dbj|BAF51384.1| glutamate recemase [Streptococcus mutans] gi|138998575|dbj|BAF51385.1| glutamate recemase [Streptococcus mutans] gi|138998579|dbj|BAF51386.1| glutamate recemase [Streptococcus mutans] gi|138998581|dbj|BAF51387.1| glutamate recemase [Streptococcus mutans] gi|138998586|dbj|BAF51388.1| glutamate recemase [Streptococcus mutans] gi|138998588|dbj|BAF51389.1| glutamate recemase [Streptococcus mutans] gi|138998590|dbj|BAF51390.1| glutamate recemase [Streptococcus mutans] gi|138998596|dbj|BAF51391.1| glutamate recemase [Streptococcus mutans] gi|138998599|dbj|BAF51392.1| glutamate recemase [Streptococcus mutans] gi|138998601|dbj|BAF51393.1| glutamate recemase [Streptococcus mutans] gi|138998608|dbj|BAF51394.1| glutamate recemase [Streptococcus mutans] gi|138998610|dbj|BAF51395.1| glutamate recemase [Streptococcus mutans] gi|138998612|dbj|BAF51396.1| glutamate recemase [Streptococcus mutans] gi|138998618|dbj|BAF51397.1| glutamate recemase [Streptococcus mutans] gi|138998620|dbj|BAF51398.1| glutamate recemase [Streptococcus mutans] gi|138998627|dbj|BAF51399.1| glutamate recemase [Streptococcus mutans] gi|138998629|dbj|BAF51400.1| glutamate recemase [Streptococcus mutans] gi|138998631|dbj|BAF51401.1| glutamate recemase [Streptococcus mutans] gi|138998636|dbj|BAF51402.1| glutamate recemase [Streptococcus mutans] gi|138998638|dbj|BAF51403.1| glutamate recemase [Streptococcus mutans] gi|138998640|dbj|BAF51404.1| glutamate recemase [Streptococcus mutans] gi|138998647|dbj|BAF51405.1| glutamate recemase [Streptococcus mutans] gi|138998649|dbj|BAF51406.1| glutamate recemase [Streptococcus mutans] gi|138998654|dbj|BAF51407.1| glutamate recemase [Streptococcus mutans] gi|138998656|dbj|BAF51408.1| glutamate recemase [Streptococcus mutans] gi|138998662|dbj|BAF51409.1| glutamate recemase [Streptococcus mutans] gi|138998664|dbj|BAF51410.1| glutamate recemase [Streptococcus mutans] gi|138998667|dbj|BAF51411.1| glutamate recemase [Streptococcus mutans] gi|138998672|dbj|BAF51412.1| glutamate recemase [Streptococcus mutans] gi|138998678|dbj|BAF51413.1| glutamate recemase [Streptococcus mutans] gi|138998680|dbj|BAF51414.1| glutamate recemase [Streptococcus mutans] gi|138998685|dbj|BAF51415.1| glutamate recemase [Streptococcus mutans] gi|138998690|dbj|BAF51416.1| glutamate recemase [Streptococcus mutans] gi|138998697|dbj|BAF51417.1| glutamate recemase [Streptococcus mutans NN2025] gi|138998699|dbj|BAF51418.1| glutamate recemase [Streptococcus mutans] gi|138998701|dbj|BAF51419.1| glutamate recemase [Streptococcus mutans] gi|138998704|dbj|BAF51420.1| glutamate recemase [Streptococcus mutans] gi|138998706|dbj|BAF51421.1| glutamate recemase [Streptococcus mutans] gi|138998712|dbj|BAF51422.1| glutamate recemase [Streptococcus mutans] gi|138998714|dbj|BAF51423.1| glutamate recemase [Streptococcus mutans] gi|138998718|dbj|BAF51424.1| glutamate recemase [Streptococcus mutans] gi|138998720|dbj|BAF51425.1| glutamate recemase [Streptococcus mutans] gi|138998726|dbj|BAF51426.1| glutamate recemase [Streptococcus mutans] gi|138998734|dbj|BAF51427.1| glutamate recemase [Streptococcus mutans] gi|138998769|dbj|BAF51437.1| glutamate recemase [Streptococcus mutans] gi|138998771|dbj|BAF51438.1| glutamate recemase [Streptococcus mutans] gi|138998776|dbj|BAF51439.1| glutamate recemase [Streptococcus mutans] gi|138998779|dbj|BAF51440.1| glutamate recemase [Streptococcus mutans] gi|138998781|dbj|BAF51441.1| glutamate recemase [Streptococcus mutans] gi|138998787|dbj|BAF51442.1| glutamate recemase [Streptococcus mutans] gi|138998792|dbj|BAF51443.1| glutamate recemase [Streptococcus mutans] gi|138998794|dbj|BAF51444.1| glutamate recemase [Streptococcus mutans] gi|138998797|dbj|BAF51445.1| glutamate recemase [Streptococcus mutans] gi|138998799|dbj|BAF51446.1| glutamate recemase [Streptococcus mutans] gi|138998803|dbj|BAF51447.1| glutamate recemase [Streptococcus mutans] gi|138998805|dbj|BAF51448.1| glutamate recemase [Streptococcus mutans] gi|138999538|dbj|BAF51350.1| glutamate recemase [Streptococcus mutans] gi|138999544|dbj|BAF51351.1| glutamate recemase [Streptococcus mutans] gi|138999546|dbj|BAF51352.1| glutamate recemase [Streptococcus mutans] gi|138999550|dbj|BAF51353.1| glutamate recemase [Streptococcus mutans] gi|138999552|dbj|BAF51354.1| glutamate recemase [Streptococcus mutans] gi|138999554|dbj|BAF51355.1| glutamate recemase [Streptococcus mutans] gi|138999559|dbj|BAF51356.1| glutamate recemase [Streptococcus mutans] gi|138999565|dbj|BAF51357.1| glutamate recemase [Streptococcus mutans] gi|138999567|dbj|BAF51358.1| glutamate recemase [Streptococcus mutans] gi|138999574|dbj|BAF51359.1| glutamate recemase [Streptococcus mutans] gi|138999576|dbj|BAF51360.1| glutamate recemase [Streptococcus mutans] gi|138999578|dbj|BAF51361.1| glutamate recemase [Streptococcus mutans] gi|195536350|dbj|BAG67898.1| glutamate recemase [Streptococcus mutans] gi|195536352|dbj|BAG67899.1| glutamate recemase [Streptococcus mutans] gi|195536354|dbj|BAG67900.1| glutamate recemase [Streptococcus mutans] gi|195536356|dbj|BAG67901.1| glutamate recemase [Streptococcus mutans] gi|195536358|dbj|BAG67902.1| glutamate recemase [Streptococcus mutans] gi|195536360|dbj|BAG67903.1| glutamate recemase [Streptococcus mutans] gi|195536362|dbj|BAG67904.1| glutamate recemase [Streptococcus mutans] gi|195536364|dbj|BAG67905.1| glutamate recemase [Streptococcus mutans] gi|195536366|dbj|BAG67906.1| glutamate recemase [Streptococcus mutans] gi|195536368|dbj|BAG67907.1| glutamate recemase [Streptococcus mutans] gi|195536370|dbj|BAG67908.1| glutamate recemase [Streptococcus mutans] gi|195536372|dbj|BAG67909.1| glutamate recemase [Streptococcus mutans] gi|195536374|dbj|BAG67910.1| glutamate recemase [Streptococcus mutans] gi|195536376|dbj|BAG67911.1| glutamate recemase [Streptococcus mutans] gi|195536378|dbj|BAG67912.1| glutamate recemase [Streptococcus mutans] gi|195536380|dbj|BAG67913.1| glutamate recemase [Streptococcus mutans] gi|195536382|dbj|BAG67914.1| glutamate recemase [Streptococcus mutans] gi|195536384|dbj|BAG67915.1| glutamate recemase [Streptococcus mutans] gi|195536386|dbj|BAG67916.1| glutamate recemase [Streptococcus mutans] gi|195536388|dbj|BAG67917.1| glutamate recemase [Streptococcus mutans] gi|195536390|dbj|BAG67918.1| glutamate recemase [Streptococcus mutans] gi|195536392|dbj|BAG67919.1| glutamate recemase [Streptococcus mutans] gi|195536394|dbj|BAG67920.1| glutamate recemase [Streptococcus mutans] gi|195536396|dbj|BAG67921.1| glutamate recemase [Streptococcus mutans] gi|195536398|dbj|BAG67922.1| glutamate recemase [Streptococcus mutans] gi|195536400|dbj|BAG67923.1| glutamate recemase [Streptococcus mutans] gi|195536402|dbj|BAG67924.1| glutamate recemase [Streptococcus mutans] gi|195536404|dbj|BAG67925.1| glutamate recemase [Streptococcus mutans] gi|195536406|dbj|BAG67926.1| glutamate recemase [Streptococcus mutans] gi|195536408|dbj|BAG67927.1| glutamate recemase [Streptococcus mutans] gi|195536410|dbj|BAG67928.1| glutamate recemase [Streptococcus mutans] gi|195536412|dbj|BAG67929.1| glutamate recemase [Streptococcus mutans] gi|195536414|dbj|BAG67930.1| glutamate recemase [Streptococcus mutans] gi|195536416|dbj|BAG67931.1| glutamate recemase [Streptococcus mutans] gi|195536418|dbj|BAG67932.1| glutamate recemase [Streptococcus mutans] gi|195536420|dbj|BAG67933.1| glutamate recemase [Streptococcus mutans] gi|195536422|dbj|BAG67934.1| glutamate recemase [Streptococcus mutans] gi|195536424|dbj|BAG67935.1| glutamate recemase [Streptococcus mutans] gi|195536426|dbj|BAG67936.1| glutamate recemase [Streptococcus mutans] gi|195536428|dbj|BAG67937.1| glutamate recemase [Streptococcus mutans] gi|195536430|dbj|BAG67938.1| glutamate recemase [Streptococcus mutans] gi|195536432|dbj|BAG67939.1| glutamate recemase [Streptococcus mutans] gi|195536434|dbj|BAG67940.1| glutamate recemase [Streptococcus mutans] gi|195536436|dbj|BAG67941.1| glutamate recemase [Streptococcus mutans] gi|195536438|dbj|BAG67942.1| glutamate recemase [Streptococcus mutans] gi|195536440|dbj|BAG67943.1| glutamate recemase [Streptococcus mutans] gi|195536442|dbj|BAG67944.1| glutamate recemase [Streptococcus mutans] gi|195536444|dbj|BAG67945.1| glutamate recemase [Streptococcus mutans] gi|195536446|dbj|BAG67946.1| glutamate recemase [Streptococcus mutans] gi|195536448|dbj|BAG67947.1| glutamate recemase [Streptococcus mutans] gi|195536450|dbj|BAG67948.1| glutamate recemase [Streptococcus mutans] gi|195536452|dbj|BAG67949.1| glutamate recemase [Streptococcus mutans] gi|195536454|dbj|BAG67950.1| glutamate recemase [Streptococcus mutans] gi|195536456|dbj|BAG67951.1| glutamate recemase [Streptococcus mutans] gi|195536458|dbj|BAG67952.1| glutamate recemase [Streptococcus mutans] gi|195536460|dbj|BAG67953.1| glutamate recemase [Streptococcus mutans] gi|195536462|dbj|BAG67954.1| glutamate recemase [Streptococcus mutans] gi|195536464|dbj|BAG67955.1| glutamate recemase [Streptococcus mutans] gi|195536466|dbj|BAG67956.1| glutamate recemase [Streptococcus mutans] gi|195536468|dbj|BAG67957.1| glutamate recemase [Streptococcus mutans] gi|195536470|dbj|BAG67958.1| glutamate recemase [Streptococcus mutans] gi|195536472|dbj|BAG67959.1| glutamate recemase [Streptococcus mutans] gi|195536474|dbj|BAG67960.1| glutamate recemase [Streptococcus mutans] gi|195536476|dbj|BAG67961.1| glutamate recemase [Streptococcus mutans] gi|195536478|dbj|BAG67962.1| glutamate recemase [Streptococcus mutans] gi|195536480|dbj|BAG67963.1| glutamate recemase [Streptococcus mutans] gi|195536482|dbj|BAG67964.1| glutamate recemase [Streptococcus mutans] gi|195536484|dbj|BAG67965.1| glutamate recemase [Streptococcus mutans] gi|195536486|dbj|BAG67966.1| glutamate recemase [Streptococcus mutans] gi|195536488|dbj|BAG67967.1| glutamate recemase [Streptococcus mutans] gi|195536490|dbj|BAG67968.1| glutamate recemase [Streptococcus mutans] gi|195536492|dbj|BAG67969.1| glutamate recemase [Streptococcus mutans] gi|195536494|dbj|BAG67970.1| glutamate recemase [Streptococcus mutans] gi|195536496|dbj|BAG67971.1| glutamate recemase [Streptococcus mutans] gi|195536498|dbj|BAG67972.1| glutamate recemase [Streptococcus mutans] gi|195536500|dbj|BAG67973.1| glutamate recemase [Streptococcus mutans] gi|195536502|dbj|BAG67974.1| glutamate recemase [Streptococcus mutans] gi|195536504|dbj|BAG67975.1| glutamate recemase [Streptococcus mutans] gi|195536506|dbj|BAG67976.1| glutamate recemase [Streptococcus mutans] gi|195536508|dbj|BAG67977.1| glutamate recemase [Streptococcus mutans] gi|195536510|dbj|BAG67978.1| glutamate recemase [Streptococcus mutans] gi|195536512|dbj|BAG67979.1| glutamate recemase [Streptococcus mutans] gi|195536514|dbj|BAG67980.1| glutamate recemase [Streptococcus mutans] gi|195536516|dbj|BAG67981.1| glutamate recemase [Streptococcus mutans] gi|195536518|dbj|BAG67982.1| glutamate recemase [Streptococcus mutans] gi|195536520|dbj|BAG67983.1| glutamate recemase [Streptococcus mutans] gi|195536522|dbj|BAG67984.1| glutamate recemase [Streptococcus mutans] gi|195536524|dbj|BAG67985.1| glutamate recemase [Streptococcus mutans] gi|195536526|dbj|BAG67986.1| glutamate recemase [Streptococcus mutans] gi|195536528|dbj|BAG67987.1| glutamate recemase [Streptococcus mutans] gi|195536530|dbj|BAG67988.1| glutamate recemase [Streptococcus mutans] gi|195536532|dbj|BAG67989.1| glutamate recemase [Streptococcus mutans] gi|195536534|dbj|BAG67990.1| glutamate recemase [Streptococcus mutans] gi|195536536|dbj|BAG67991.1| glutamate recemase [Streptococcus mutans] gi|195536538|dbj|BAG67992.1| glutamate recemase [Streptococcus mutans] gi|195536540|dbj|BAG67993.1| glutamate recemase [Streptococcus mutans] gi|195536542|dbj|BAG67994.1| glutamate recemase [Streptococcus mutans] gi|195536544|dbj|BAG67995.1| glutamate recemase [Streptococcus mutans] gi|195536546|dbj|BAG67996.1| glutamate recemase [Streptococcus mutans] gi|195536548|dbj|BAG67997.1| glutamate recemase [Streptococcus mutans] gi|195536550|dbj|BAG67998.1| glutamate recemase [Streptococcus mutans] gi|195536552|dbj|BAG67999.1| glutamate recemase [Streptococcus mutans] gi|195536554|dbj|BAG68000.1| glutamate recemase [Streptococcus mutans] gi|195536556|dbj|BAG68001.1| glutamate recemase [Streptococcus mutans] gi|195536558|dbj|BAG68002.1| glutamate recemase [Streptococcus mutans] gi|195536560|dbj|BAG68003.1| glutamate recemase [Streptococcus mutans] gi|195536562|dbj|BAG68004.1| glutamate recemase [Streptococcus mutans] gi|195536564|dbj|BAG68005.1| glutamate recemase [Streptococcus mutans] gi|195536566|dbj|BAG68006.1| glutamate recemase [Streptococcus mutans] gi|195536568|dbj|BAG68007.1| glutamate recemase [Streptococcus mutans] gi|195536570|dbj|BAG68008.1| glutamate recemase [Streptococcus mutans] gi|195536572|dbj|BAG68009.1| glutamate recemase [Streptococcus mutans] gi|195536574|dbj|BAG68010.1| glutamate recemase [Streptococcus mutans] gi|195536576|dbj|BAG68011.1| glutamate recemase [Streptococcus mutans] gi|195536578|dbj|BAG68012.1| glutamate recemase [Streptococcus mutans] gi|195536580|dbj|BAG68013.1| glutamate recemase [Streptococcus mutans] gi|195536582|dbj|BAG68014.1| glutamate recemase [Streptococcus mutans] gi|195536584|dbj|BAG68015.1| glutamate recemase [Streptococcus mutans] gi|195536586|dbj|BAG68016.1| glutamate recemase [Streptococcus mutans] gi|195536588|dbj|BAG68017.1| glutamate recemase [Streptococcus mutans] gi|195536590|dbj|BAG68018.1| glutamate recemase [Streptococcus mutans] gi|195536592|dbj|BAG68019.1| glutamate recemase [Streptococcus mutans] gi|195536594|dbj|BAG68020.1| glutamate recemase [Streptococcus mutans] gi|195536608|dbj|BAG68027.1| glutamate recemase [Streptococcus mutans] gi|195536610|dbj|BAG68028.1| glutamate recemase [Streptococcus mutans] gi|195536612|dbj|BAG68029.1| glutamate recemase [Streptococcus mutans] gi|195536614|dbj|BAG68030.1| glutamate recemase [Streptococcus mutans] gi|195536616|dbj|BAG68031.1| glutamate recemase [Streptococcus mutans] gi|195536618|dbj|BAG68032.1| glutamate recemase [Streptococcus mutans] gi|195536620|dbj|BAG68033.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K ++ Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKVKMI- 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIK 112 >gi|138998741|dbj|BAF51429.1| glutamate recemase [Streptococcus mutans] gi|138998743|dbj|BAF51430.1| glutamate recemase [Streptococcus mutans] gi|138998746|dbj|BAF51431.1| glutamate recemase [Streptococcus mutans] gi|138998748|dbj|BAF51432.1| glutamate recemase [Streptococcus mutans] gi|138998750|dbj|BAF51433.1| glutamate recemase [Streptococcus mutans] gi|138998761|dbj|BAF51434.1| glutamate recemase [Streptococcus mutans] gi|138998763|dbj|BAF51435.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K ++ Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKRVKMI- 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIK 112 >gi|138998736|dbj|BAF51428.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K ++ Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKVKMI- 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIK 112 >gi|299143433|ref|ZP_07036513.1| glutamate racemase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517918|gb|EFI41657.1| glutamate racemase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 278 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 9/190 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL++ ++ + FIY D PYG ++K F + L K Sbjct: 8 IGVFDSGIGGLSVLKEAINILTDEKFIYFGDTARIPYGIRTPEEIEKFTEESF-EFLKKQ 66 Query: 76 QPVLSVIACNTA--FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +IACNTA + L R FP + + P+ + T++ +++L+T T+ Sbjct: 67 GVKAGIIACNTATCYGLETVSKRFDFPIIGVV--TPSCEAVHKITENKNVALLATQGTVN 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + V L +E I ++ ++K IE E D Sbjct: 125 SKVYDEHFFDIDPFVDLRSVGCPDLVVAIENG----HIDDEYVEKIIEKYLNEINEFDYD 180 Query: 194 VIVLACTHYP 203 ++L CTH+P Sbjct: 181 TLILGCTHFP 190 >gi|46200986|ref|ZP_00055981.2| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1] Length = 243 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 4/168 (2%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 MP+ +Y+ D PYG + + + +++K L V+ACNTA + D + Sbjct: 1 MPDEQLLYLGDVARQPYGTKSPRTVTRYAVQAAEFLVEKGIKAL-VVACNTASAVALDAI 59 Query: 96 RSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154 FP + LG V A AA + G I + +T T R I + V Sbjct: 60 EQRFPGLPVLGVVEAGADGAARASPQGRIVVAATEGTCRSEAYERAIARRRGGAQVRCVP 119 Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 + + EE I E + + F +G D +VL CTH+ Sbjct: 120 CPLFVALAEEGLTDGPIVESVARHYLGSLFDGSQGG--DCLVLGCTHF 165 >gi|167949668|ref|ZP_02536742.1| glutamate racemase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 275 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 23/157 (14%) Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140 VIACNTA LR ++ +G P +K A +++G++ IL+T TL +L Sbjct: 28 VIACNTATAAAVASLRQQH-TLPIIGMEPGLKPGIAASRNGVVGILATEGTLGSAKFRDL 86 Query: 141 IHSY-------VSQCH--IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + CH + V S L+ +K+ +EI+ I+ + Sbjct: 87 LRRHGEGARVIIRPCHGWVRQVESTDLSG-----PRALKVVAEEIQPLID--------QG 133 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D +VL CTH+P + RQ+ P +D ++A+ Sbjct: 134 VDSLVLGCTHFPFLHQAIRQMVPAKTHIIDTGPAVAK 170 >gi|163732003|ref|ZP_02139449.1| glutamate racemase, putative [Roseobacter litoralis Och 149] gi|161394301|gb|EDQ18624.1| glutamate racemase, putative [Roseobacter litoralis Och 149] Length = 269 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 38/220 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 S+ IFDSG+GGL VL ++ +P+ F Y+AD PYG + + + D Sbjct: 2 SVGIFDSGLGGLTVLDAVQTRLPDVSFAYLADSAHAPYGVRTADDIYDLTCRSVARLFDT 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 GCN-LVILACNTASAAALRRMQESWVPDDKRVLGVFVPLIEAMTERQWGDNSPPREVGVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171 +++ +TPAT+ S+ ++ + VE ACG + + Sbjct: 121 HVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDMML 168 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 E ++ ++ ++++ D +L CTHYPL+ +F++ Sbjct: 169 AEALVRSHVDA--LQRKMPTPDAAILGCTHYPLMQDIFQK 206 >gi|322379012|ref|ZP_08053415.1| glutamate racemase [Helicobacter suis HS1] gi|322380777|ref|ZP_08054883.1| glutamate racemase [Helicobacter suis HS5] gi|321146781|gb|EFX41575.1| glutamate racemase [Helicobacter suis HS5] gi|321148504|gb|EFX43001.1| glutamate racemase [Helicobacter suis HS1] Length = 260 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 24/202 (11%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+ + H IY D PYG +D A ++ D YQ Sbjct: 14 VFDSGVGGLSVLESLLKARLFEHIIYYGDTARVPYGP-KDPATIQKFSLEALDFFKPYQI 72 Query: 78 VLSVIACN--TAFTLIKDELRSTFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPATLR 133 + ++ACN +A+ L + +S P + + G + +K+ +Q I IL T AT+ Sbjct: 73 DMLIVACNSVSAWALPQMRNQSKMPIVGVIEAGVLSVLKKT---SQEQPILILGTKATIA 129 Query: 134 RT-YTSNL-IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEG 189 Y L H Y ++ +++ + +EE + E + +E C + K+ Sbjct: 130 SNRYAKELGAHGYK---NVQSLATGLFVPLIEE-----GVLEGPL---LEACMVHYFKDL 178 Query: 190 K-RTDVIVLACTHYPLIVHVFR 210 K V+VL CTH+P IV + Sbjct: 179 KCAPSVVVLGCTHFPWIVSSLK 200 >gi|113954148|ref|YP_730755.1| glutamate racemase [Synechococcus sp. CC9311] gi|113881499|gb|ABI46457.1| glutamate racemase [Synechococcus sp. CC9311] Length = 263 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 19/190 (10%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSGIGGL VL+++ Y+ D PYG+ ++ + + L Q Sbjct: 7 LFDSGIGGLTVLRRILERHGAVPVTYLGDTARVPYGSRSPSEIRSIAAEVVA-WLRAQQV 65 Query: 78 VLSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNT L +D E ++ P + +GA AAA + + +L+TPAT+ Sbjct: 66 STVVMACNTTNALARDVTEGQAGVPVVGLIGA------AAALVKESRVGVLATPATV--- 116 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKRT 192 S + H ++++ ++ I+ ++ DE+++ Sbjct: 117 -ASGAYRESIEALH---PGTLVVQQACPDFVPLIEAGDLRSDELREAAIRYLQPLLEASV 172 Query: 193 DVIVLACTHY 202 D +VL CTHY Sbjct: 173 DSVVLGCTHY 182 >gi|99080963|ref|YP_613117.1| glutamate racemase [Ruegeria sp. TM1040] gi|123077676|sp|Q1GHL1|MURI_SILST RecName: Full=Glutamate racemase gi|99037243|gb|ABF63855.1| glutamate racemase [Ruegeria sp. TM1040] Length = 269 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 39/224 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ D+ Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVDFLYYGDNSHAPYGVRDAEDIYELTHKAVHDMWDR 61 Query: 75 YQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNT A L + + LG + +A Q G Sbjct: 62 -GCNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171 +++ +TPAT+ S+ ++ + VE ACG + + Sbjct: 121 HVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDMIL 168 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ-LSP 214 E +K ++ ++ R + +L CTHYPL+ VF++ L P Sbjct: 169 AEALVKSHVDALL--RKMPRPEAAILGCTHYPLMEDVFQKALGP 210 >gi|283953730|ref|ZP_06371261.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 414] gi|283794771|gb|EFC33509.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 414] Length = 247 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 12/193 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL+ + IY D PYG + + K + + ++ Sbjct: 3 IGVFDSGVGGISVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFKQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Q + +IACNTA D LRS FP + A ++ I +++T AT++ Sbjct: 62 QIDMLIIACNTASAYALDALRSKAHFPIYGVIDAGVKSTIKTLPDKNKEILVIATKATIK 121 Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y L+ +I+ +++ + VEE GI + D ++ +E F K Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITVP 173 Query: 193 DVIVLACTHYPLI 205 D ++LACTH+PL+ Sbjct: 174 DALILACTHFPLL 186 >gi|197693870|gb|ACH71604.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 15/197 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + Y++ H+ ++ + +EE I E E+ + + Sbjct: 121 QSNAYDKALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172 Query: 191 RTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 173 LPEVIILGCTHFPLIAQ 189 >gi|160901642|ref|YP_001567223.1| glutamate racemase [Petrotoga mobilis SJ95] gi|160359286|gb|ABX30900.1| glutamate racemase [Petrotoga mobilis SJ95] Length = 263 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 36/231 (15%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL+K+ + + Y+AD++ PYG+ L++ L + S K Sbjct: 11 IGLFDSGIGGLTVLKKVIENFGNHEYFYLADNLNVPYGSKPIPFLRENLKNILS-FFQKM 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133 + + ACNT +++K ++ F + + +I A T ++ + +L+T T+ Sbjct: 70 KVDFLISACNTTDSIVK---KTNFDTKNYNFTYVSIIDNAIKTIERNDTVLLLATENTIN 126 Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------EDEIKKEIEGCFI 185 Y LI ++ +EE AC + + + ++ + + ++ Sbjct: 127 LGAYKEALISKKITN--------------LEEKACPLFVPLIEEGYWDGQMAESVLRFYL 172 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--------VDWLDNSDSIAR 228 + + ++L CTHYP++ R+ + VD+L N + R Sbjct: 173 QDSKSKYHKVILGCTHYPILEKQIRKYTNSSIVDPADGVVDFLKNEIKLER 223 >gi|159903573|ref|YP_001550917.1| putative aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. MIT 9211] gi|159888749|gb|ABX08963.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. MIT 9211] Length = 267 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 11/213 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL+ + + + +Y+AD PYG ++ + L + + Sbjct: 7 IFDSGVGGLTVLKNVLYRHGDLSAVYLADTARIPYGVKSPLEIQTIALGLVEWLNMQNIS 66 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-RTY 136 VL+V ACNT +L ++ + S+ +G + ++ ++ I +L+TP+T R Y Sbjct: 67 VLAV-ACNTTDSL-AIKIVKQYSSVPVVGLIDSVGDLVFESR---IGVLATPSTTESRAY 121 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T ++ S + V + V G +I +E + + + I+ Sbjct: 122 TKVIMASNPNA----FVIEQACPAFVPLIETG-QINSNEFQIVAKNYLKPLIDSNVEAII 176 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 L C+HYPL+ ++L P V +D S ++++ Sbjct: 177 LGCSHYPLLKSRLQELLPKHVRLIDPSIGLSQK 209 >gi|315453056|ref|YP_004073326.1| glutamate racemase [Helicobacter felis ATCC 49179] gi|315132108|emb|CBY82736.1| glutamate racemase [Helicobacter felis ATCC 49179] Length = 252 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 24/241 (9%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL VL+ + IY D PYG +D A + + YQ Sbjct: 5 IFDSGVGGLSVLKSVLQARLFAEIIYYGDTARVPYGP-KDKATIEHFALEALEFFKPYQI 63 Query: 78 VLSVIACNTAFTLIKDELR--STFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPATLR 133 + ++ACNT L +++R S+ P + + G + I+Q + I +L T AT+ Sbjct: 64 EMLIVACNTVSALALEKMRAHSSIPIVGVIEAGILATIQQFP--NKHTPILVLGTRATIA 121 Query: 134 R-TYTSNL-IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 Y +L H Y ++ +++ + +EE + E + + + E Sbjct: 122 SGQYAQHLSAHGY---SNVQSLATGLFVPLIEE-----GVLEGALLRACMQHYFENIQNA 173 Query: 192 TDVIVLACTHYPLIV----HVFRQLSPWPVDWLDNSDSIA---RRARCLLPRINTHQTRV 244 V++L CTH+PLI + F+ P + + D+I + L+P + Q R Sbjct: 174 PTVLILGCTHFPLIASSLQNYFQTRFNHPCALVHSGDAIVHYLQDTHHLIPLNHPPQVRF 233 Query: 245 F 245 F Sbjct: 234 F 234 >gi|198284544|ref|YP_002220865.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666518|ref|YP_002427212.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249065|gb|ACH84658.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518731|gb|ACK79317.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 269 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 15/264 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL L +P+ H+++ D PYG+ +++ ++ + Sbjct: 3 IGIFDSGIGGLSTLLSCLRYLPDAHYLFYGDSAHAPYGDKSPAQVREWTEAAYAWFIAAG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134 + V+ACNTA + LR + +G PAI++A G + +L+T T+ Sbjct: 63 VDAV-VLACNTATSAAVAPLRERA-DVPIIGIEPAIRKALTEHPQGGVLLLATSITVGGE 120 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE-IKKEIEGCFIEKEGKRTD 193 + L Q + ++ LA +E +++ ++ ++ G Sbjct: 121 KLRNLLNLLENGQERVRPLACSGLAEIIEAQDADWRLRAGRYLQAQVRPARTADIG---- 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPRINTHQTRVFDDHA--- 249 V+VL CTHY I + + +D ++ +AR+ R L I T HA Sbjct: 177 VVVLGCTHYCWIDDLIHDTLGGDITVVDGNEGVARQLCRRLGVPIRTDTAPPLPRHARIS 236 Query: 250 LFLSGKPDIA---MRRLMQGFGLK 270 L+ + D+ R+L+ G++ Sbjct: 237 LYFTANNDVKSHLARQLLAASGVR 260 >gi|262066069|ref|ZP_06025681.1| putative glutamate racemase [Fusobacterium periodonticum ATCC 33693] gi|291380163|gb|EFE87681.1| putative glutamate racemase [Fusobacterium periodonticum ATCC 33693] Length = 257 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 47/225 (20%), Positives = 96/225 (42%), Gaps = 14/225 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I +FD+G+G +++ ++ P+ +Y AD FPYG L+ + + Sbjct: 1 MNKAIAVFDAGLGSYAIVEAIKKAYPQQDILYFADRKSFPYGTKTTEELRDIIENSIDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126 L+K + V+A N + D++++ +G P +K + + I + Sbjct: 61 LEKGAAFI-VLASNAPSITVLDKIKN---KDNVIGIYPPLKDVIKDKKKNTLIIGAKVMI 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +P + Y + + Q H+ S +I ++ ++ E IK I+ C E Sbjct: 117 DSPEL--QEYIKKEVGDFYKQFHVENASPLIQLIESGDFINNVEETEKIIKNFIDNC--E 172 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 + + D I L+ TH P + F+++ P D SD + + + Sbjct: 173 NKFGKLDSITLSSTHLPWLSSYFQKIIP-EAKLYDPSDDLVKAIK 216 >gi|319948539|ref|ZP_08022670.1| glutamate racemase [Dietzia cinnamea P4] gi|319437786|gb|EFV92775.1| glutamate racemase [Dietzia cinnamea P4] Length = 293 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 97/235 (41%), Gaps = 10/235 (4%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 +P+ +YV D PYG ++ + + ++D+ L VIACNTA + + Sbjct: 52 LPDESVVYVGDTAHGPYGPLPLAQVRAHALAVADQLVDRGVKAL-VIACNTASAAMLRDA 110 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 R +P PA ++A A T+SG I +++T R T S V+ ++S Sbjct: 111 RERYPVPVVEVIQPAARRAVATTRSGRIGVIAT----RATVASRAYDDAVAAAAGIELTS 166 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 + VE GI ++ E D +VL CTHYPL+ V + + Sbjct: 167 VACPKFVEFVERGITSGR-QVLGLAEAYLAPIRDADVDTLVLGCTHYPLLSGVVQLAAGD 225 Query: 216 PVDWLDNSDSIARRA-RCLLPR--INTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 V + +++ A+ R L + H ++G PD A RR+ F Sbjct: 226 HVTLVSSAEETAKDVLRVLTAEDLLRPHDPADPPTREYLVTGDPD-AFRRVASRF 279 >gi|84684746|ref|ZP_01012646.1| Glutamate racemase [Maritimibacter alkaliphilus HTCC2654] gi|84667081|gb|EAQ13551.1| Glutamate racemase [Rhodobacterales bacterium HTCC2654] Length = 270 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 38/220 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +PE F+Y D+ PYG + + S + D+ Sbjct: 2 AVGIFDSGLGGLTVLDAVTKRLPEVPFVYFGDNAHTPYGVRDADDIYNLTTKAVSRLWDE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ P LG + +A + G Sbjct: 62 GCD-LVILACNTASAAALRRMQESWIPPDKRVLGVFVPLIEALTERKWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE------ 175 +++ +TPAT+ S+ ++ + VE ACG + E Sbjct: 121 HVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDMIL 168 Query: 176 ----IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 ++ ++ ++++ + +L CTHYP++ VF++ Sbjct: 169 ADALVRSHVDA--LKRKMPNPEAAILGCTHYPIMEDVFQE 206 >gi|184155007|ref|YP_001843347.1| glutamate racemase [Lactobacillus fermentum IFO 3956] gi|417584|sp|Q03469|MURI_LACFE RecName: Full=Glutamate racemase gi|229486241|sp|B2GB35|MURI_LACF3 RecName: Full=Glutamate racemase gi|149549|gb|AAA25241.1| glutamate racemase [Lactobacillus fermentum] gi|183226351|dbj|BAG26867.1| glutamate racemase [Lactobacillus fermentum IFO 3956] Length = 268 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 16/258 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V++ ++ +P I+V D FPYG +D A + Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGT-KDQAEVR 51 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L L K+ + V+ACNTA L++ + +G + P + A A + G Sbjct: 52 QLALSIGAFLLKHDVKMMVVACNTATAAALPALQAAL-PIPVIGVIEPGARAALAQDKKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T AT I + ++ + VE G K E+ E Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIVEHGQTGTA-KAQEVVSEQL 169 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 F E K +++ CTH+P + + V +D + A+ L + Sbjct: 170 MTFKEHPVK---TLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226 Query: 242 TRVFDDHALFLSGK-PDI 258 ++ L+ +G PD+ Sbjct: 227 NHAHPNYHLYSTGNLPDL 244 >gi|261368271|ref|ZP_05981154.1| glutamate racemase [Subdoligranulum variabile DSM 15176] gi|282569788|gb|EFB75323.1| glutamate racemase [Subdoligranulum variabile DSM 15176] Length = 271 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 15/222 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68 + I +FDSG+GGL ++++R ++P +Y D PYG+ + ++ + FL Sbjct: 3 KRPIGVFDSGLGGLTAVRQLRRVLPGEDIVYFGDTGRVPYGSRARDTIVQYARQDIRFLL 62 Query: 69 SDILDKYQPVLSVI-ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 S Q V +I AC T + E + P A + A A T++ I I+ Sbjct: 63 S------QDVKFIIAACGTVSSTFPPEEAARLPVPYTGVVGAASRAAVAATRNRKIGIIG 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+R + +I + I + + VE G + + + + ++E Sbjct: 117 TAATIRSGSYAAVIRDMMPDVQITAKACPLFVPLVEN---GYVQDGNPVTQLVISDYLES 173 Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYPL+ + V +D+ A+ Sbjct: 174 VRAAGIDTLILGCTHYPLLKKMIGDYVGESVTLIDSGKVTAQ 215 >gi|289551045|ref|YP_003471949.1| Glutamate racemase [Staphylococcus lugdunensis HKU09-01] gi|289180577|gb|ADC87822.1| Glutamate racemase [Staphylococcus lugdunensis HKU09-01] Length = 266 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 102/254 (40%), Gaps = 25/254 (9%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K L + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDIARCPYGPRPGDEVKAFTTELANKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ S+ +G + P + A T++ + IL T Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQHIL-SIPVIGVIEPGARTAIMTTKNQHVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKIKEDEIK---KEIEGCFIE 186 T++ S+ + H + + V AC G ++++ I I Sbjct: 119 TIK------------SEAYRHHIKRINPNVEVTGVACPGFVPLVEQMRYNDPTITSIIIH 166 Query: 187 KEGKR-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + K D ++L CTHYPL+ + + AR LL N H Sbjct: 167 QTLKHWRNSIADTVILGCTHYPLLYQPLNDYFGGDKTVISSGLETAREVSALLTFSNEHA 226 Query: 242 TRVFD-DHALFLSG 254 + H F +G Sbjct: 227 SYTAQPQHRFFSTG 240 >gi|259419026|ref|ZP_05742943.1| glutamate racemase [Silicibacter sp. TrichCH4B] gi|259345248|gb|EEW57102.1| glutamate racemase [Silicibacter sp. TrichCH4B] Length = 269 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 39/224 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ D+ Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVDFLYYGDNSHAPYGVRDAEDIYQLTHKAVHDMWDR 61 Query: 75 YQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNT A L + + LG + +A Q G Sbjct: 62 -GCNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171 +++ +TPAT+ S+ ++ + VE ACG + + Sbjct: 121 HVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDMIL 168 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ-LSP 214 E +K ++ ++ R + +L CTHYPL+ +F++ L P Sbjct: 169 AEALVKSHVDALL--RKMPRPEAAILGCTHYPLMEDIFQKALGP 210 >gi|159044309|ref|YP_001533103.1| glutamate racemase [Dinoroseobacter shibae DFL 12] gi|189030360|sp|A8LMF7|MURI_DINSH RecName: Full=Glutamate racemase gi|157912069|gb|ABV93502.1| glutamate racemase [Dinoroseobacter shibae DFL 12] Length = 273 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 38/219 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL + +PE F+Y D++ PYG + + + S + D+ Sbjct: 2 AVGVFDSGLGGLTVLDAVSRRLPEVPFVYYGDNLHAPYGVRDAEDVYELTTGAVSRLWDE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PS-MAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ PS LG + +A Q G Sbjct: 62 GCD-LVILACNTASAAALRRMQESWVPSDKRVLGVFVPLIEALTERQWGDNSPPREVAIK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171 +++ +TPAT+ S+ ++ + VE CG + + Sbjct: 121 HVALFATPATVS------------SRAFQRELAFRAIGVDVEAQPCGGVVDAIEDGDMIL 168 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 E ++ +E +++ + +L CTHYPL+ VF+ Sbjct: 169 AEALVRSHVEA--LKRRMPHPEAAILGCTHYPLMQDVFQ 205 >gi|83942612|ref|ZP_00955073.1| glutamate racemase [Sulfitobacter sp. EE-36] gi|83953853|ref|ZP_00962574.1| glutamate racemase [Sulfitobacter sp. NAS-14.1] gi|83841798|gb|EAP80967.1| glutamate racemase [Sulfitobacter sp. NAS-14.1] gi|83846705|gb|EAP84581.1| glutamate racemase [Sulfitobacter sp. EE-36] Length = 269 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 58/229 (25%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-----HALKKRLMFL 67 ++ IFDSG+GGL V ++ +P+ F+Y+AD PYG N +D A +RL Sbjct: 2 AVGIFDSGLGGLTVWDAVQAQLPDVDFVYLADSAHAPYGVRNADDIYNLTTAATQRLFDA 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PS-MAFLGAVPAIKQAAAYTQSG---- 121 D++ ++ACNTA ++ + PS LG + +A Q G Sbjct: 62 GCDLV--------ILACNTASAAALRRMQEGWIPSDKRVLGVFVPLIEAMTERQWGDNSP 113 Query: 122 -------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 +++ +TPAT+ S+ ++ + VE ACG + Sbjct: 114 PREVDLKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAI 161 Query: 175 EIKKEIEGCFIEKEG---------KRT----DVIVLACTHYPLIVHVFR 210 E +G FI E KR + +L CTHYPL+ F+ Sbjct: 162 E-----DGDFILAEALVRSHVDALKRKMPAPEAAILGCTHYPLMQETFQ 205 >gi|222823123|ref|YP_002574696.1| glutamate racemase [Campylobacter lari RM2100] gi|222538344|gb|ACM63445.1| glutamate racemase [Campylobacter lari RM2100] Length = 246 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 31/223 (13%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+ + +IY D PYG + + K + +K Sbjct: 5 VFDSGVGGLSVLKSLLQAKLFKEYIYYGDTARVPYGVKDKETIIKFSLEALEFFKEKKVD 64 Query: 78 VLSVIACNT----AFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLISILSTPATL 132 +L +IACNT A ++K ++FP + + A V A+K + S ++ +++T AT+ Sbjct: 65 ML-IIACNTVSAHALEILKA--NASFPVLGVIEAGVLAVKNSLEDKNSNIL-VIATQATV 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI--------KEDEIKKEIEGCF 184 H+Y L+ L +VEE A G+ + + D +K E F Sbjct: 121 DS-------HAYKRA----LIKEGFL--KVEEKATGLFVPMVEEGIFQGDFLKAAFEYYF 167 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 K + ++LACTH+PLI H + + + ++IA Sbjct: 168 -NKLKFHPNALILACTHFPLIAHSLSEYFGKNTKLIHSGEAIA 209 >gi|84503079|ref|ZP_01001175.1| Glutamate racemase [Oceanicola batsensis HTCC2597] gi|84388623|gb|EAQ01495.1| Glutamate racemase [Oceanicola batsensis HTCC2597] Length = 270 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 42/221 (19%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + + D Sbjct: 2 AVGIFDSGLGGLTVLDAVTKRLPDVPFVYFGDNAHAPYGVRDADDIYDLTTRAVARMFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA ++ ++ VPA K+ + + A R Sbjct: 62 GCD-LVVLACNTAAAAALRRMQESW--------VPADKRVLG------VFVPLIEALTER 106 Query: 135 TYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG----------I 169 + N V+ H+ L ++ +ASR VE ACG + Sbjct: 107 QWGDNSPPREVAVKHVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDM 166 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + E ++ ++ ++++ R + +L CTHYPL+ VF+ Sbjct: 167 ILAEALVRSHVDA--LKRKMPRPEAAILGCTHYPLMDEVFQ 205 >gi|325290677|ref|YP_004266858.1| glutamate racemase [Syntrophobotulus glycolicus DSM 8271] gi|324966078|gb|ADY56857.1| glutamate racemase [Syntrophobotulus glycolicus DSM 8271] Length = 304 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 41/244 (16%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71 I +FDSG+GGL V++++ +P+ +Y D PYG+ + + + FL S Sbjct: 7 IGVFDSGVGGLTVVKQILASIPDARIVYFGDTARAPYGSRSKEEIIAFSSQIIPFLISQG 66 Query: 72 LDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 D + V ACNT A +IK + GA A+K T++G I +L+ Sbjct: 67 AD-----IIVAACNTSSANALPVIKKDFDLPIIGPIESGACLAVK----MTRNGKIGLLA 117 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR------------VEEYACGI------ 169 T RT S H V++ V + S V+ AC + Sbjct: 118 T----ERTVASEAFHLAVTKVLTKGVRPLAEKSGASGQSGEKPISLVKSQACPLFVPLIE 173 Query: 170 -KIKEDEIKKEIEGCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + + + + I G ++ D I+L CTHYP + L V +D + I Sbjct: 174 AGLADSDQARNIVGMYLAPLTEAGVDTIILGCTHYPFLNSAITDLVGEKVVLVDPAVEIV 233 Query: 228 RRAR 231 R Sbjct: 234 SELR 237 >gi|312199600|ref|YP_004019661.1| glutamate racemase [Frankia sp. EuI1c] gi|311230936|gb|ADP83791.1| glutamate racemase [Frankia sp. EuI1c] Length = 343 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 6/213 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P +Y D PYG A +RL D L Sbjct: 6 IGVFDSGVGGLTVARAILDQLPHEPLLYFGDTAHAPYGPRP-IAEVRRLALDAMDTLVAE 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA + R + +PA ++A A T+SG + ++ T AT+ Sbjct: 65 GVKLLVIACNTASAACLRDARERYDVPVVEVVLPAARRAVAATRSGRVGVIGTVATI--- 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 TS V+ ++S+ + V+ G ++ E + D + Sbjct: 122 -TSRAYDDAVAAAPDVTLTSVSCPAFVDFVERGTTAGR-QLLGLAEAYLAPLQEADVDTL 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +L CTHYPL+ V + V + +++ A+ Sbjct: 180 ILGCTHYPLLTGVIGLVMGESVTLVSSAEETAK 212 >gi|260433846|ref|ZP_05787817.1| glutamate racemase [Silicibacter lacuscaerulensis ITI-1157] gi|260417674|gb|EEX10933.1| glutamate racemase [Silicibacter lacuscaerulensis ITI-1157] Length = 269 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 110/279 (39%), Gaps = 50/279 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70 ++ IFDSG+GGL VL + +P+ F+Y AD PYG + ED + + + L+S Sbjct: 2 AVGIFDSGLGGLTVLNAAQTRLPDVDFLYYADSAHAPYGVRDAEDIYNLTRNAVQDLWSR 61 Query: 71 ILDKYQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG------- 121 D L ++ACNT A L + + LG + +A Q G Sbjct: 62 GCD-----LVILACNTASAAALRRMQEEGVPQGKRVLGVFVPLIEALTERQWGDNSPPRE 116 Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--------- 168 +++ +TPAT+ S+ ++ + VE ACG Sbjct: 117 VAVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG 164 Query: 169 -IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + + E ++ ++ ++++ +L CTHYPL+ F+ V D + Sbjct: 165 DMILAEALVRSHVDA--LKRKMPHPQAAILGCTHYPLMAEAFQAALGPDVQVFSQGDLV- 221 Query: 228 RRARCLLPRINTHQTRVFDDHALFL-SGKPDIAMRRLMQ 265 A L + H + A FL +G P R Q Sbjct: 222 --AESLADYLQRHPGMLGTGEAGFLTTGDPKKVSDRATQ 258 >gi|77463505|ref|YP_353009.1| glutamate racemase [Rhodobacter sphaeroides 2.4.1] gi|123591864|sp|Q3J276|MURI_RHOS4 RecName: Full=Glutamate racemase gi|77387923|gb|ABA79108.1| glutamate racemase [Rhodobacter sphaeroides 2.4.1] Length = 270 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 42/222 (18%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70 ++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + +D H L+++ Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121 D L ++ACNTA ++ T+ LG + +A Q G Sbjct: 62 GCD-----LVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPRE 116 Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KE 173 +++ +TPAT+ S+ ++ + VE CG + + Sbjct: 117 VAVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG 164 Query: 174 DEIKKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211 DEI E + +E +R +L CTHYPL+ +F++ Sbjct: 165 DEILAEALVRSHVEALKRRMPHPQAAILGCTHYPLMEPIFQE 206 >gi|313681673|ref|YP_004059411.1| glutamate racemase [Sulfuricurvum kujiense DSM 16994] gi|313154533|gb|ADR33211.1| glutamate racemase [Sulfuricurvum kujiense DSM 16994] Length = 248 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 25/256 (9%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V++ + IY D PYG +D R + ++ Sbjct: 5 VFDSGVGGLSVVKSLLEHKLFEEIIYFGDTARVPYG-VKDQNTIIRYSLEALEFFKNFEI 63 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTPATLR 133 L + ACNT DE+R +G V A+K A + ++ IL T AT++ Sbjct: 64 DLLITACNTVSAYALDEMRE-HSHCDVIGVVDPGVLALKNAIPSNDANIL-ILGTKATVK 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + S + ++ +++ +L VEE + E E+ + + K D Sbjct: 122 SGAYEKGLRS-LGYRNLSAIATSLLVPIVEE-----GLYEGEVLQSALHHYFRDLEKTPD 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHAL- 250 I+L CTH+PL+ + + ++ ++ + +H T+ FD L Sbjct: 176 AIILGCTHFPLVARAIDT-------YFEGKSTLIHSGEAIVEYLESHYDFTKRFDTTNLK 228 Query: 251 -FLSGKPDIAMRRLMQ 265 F S P+ +RR+ + Sbjct: 229 FFASENPE-GLRRVAK 243 >gi|256002760|gb|ACU52625.1| glutamate racemase [Bacillus sp. LL3] Length = 250 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 11/224 (4%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTL-IKDE 94 +P+ + IYV D PYG + + + + +L+ + + VIACNTA + ++D Sbjct: 4 LPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYLLENHHIKMLVIACNTATAIALEDI 63 Query: 95 LRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR-RTYTSNLIHSYVSQCHIHL 152 R T + +G + P + A T++ I ++ T T++ R Y L+ + + Sbjct: 64 QRKT--DIPVVGVIQPGARTAIKVTKNQHIGVIGTINTIKSRAYEQALL-GLNADLQVEN 120 Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212 ++ +L VE + ++ + +E +G D ++L CTHYP++ + Sbjct: 121 MACPLLVPFVESG----RFLQESAAEAVEASLEPLKGTAIDTLILGCTHYPILKDPIQDY 176 Query: 213 SPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSGK 255 V + + D AR +L +Q++ +H +G+ Sbjct: 177 MGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQFLTTGE 220 >gi|126462361|ref|YP_001043475.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17029] gi|189030365|sp|A3PK37|MURI_RHOS1 RecName: Full=Glutamate racemase gi|126104025|gb|ABN76703.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17029] Length = 270 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 42/222 (18%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70 ++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + +D H L+++ Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121 D L ++ACNTA ++ T+ LG + +A Q G Sbjct: 62 GCD-----LVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPRE 116 Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KE 173 +++ +TPAT+ S+ ++ + VE CG + + Sbjct: 117 VAVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG 164 Query: 174 DEIKKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211 DEI E + +E +R +L CTHYPL+ +F++ Sbjct: 165 DEILAEALVRSHVEALKRRMPHPQAAILGCTHYPLMEPIFQE 206 >gi|87124213|ref|ZP_01080062.1| Glutamate racemase [Synechococcus sp. RS9917] gi|86167785|gb|EAQ69043.1| Glutamate racemase [Synechococcus sp. RS9917] Length = 262 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 21/223 (9%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+ + +Y+ D PYG+ ++ + + L Q Sbjct: 7 LFDSGVGGLTVLRSVLHRHGPVPCVYLGDTARVPYGSRAPSEIRSIAAEVVA-WLRSQQV 65 Query: 78 VLSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNT L +D E ++ P + +GA AAA + + +L+TPAT+ Sbjct: 66 STVVMACNTTNALARDVAEGQAGVPVVGLIGA------AAALVRESRVGVLATPATV--- 116 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEK--EGKR 191 S + H S+++ E+ I+ + ++I ++ E Sbjct: 117 -ASGAYRESIEALHP---GSLVVQQACPEFVPRIEAGDLSSPALRQIAQLYLTPLLEASV 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VI L CTHYPL+ + + L P V +D ++ +AR+ LL Sbjct: 173 QSVI-LGCTHYPLLQPLLQSLLPPDVRLIDPAEGVARQLDALL 214 >gi|332558385|ref|ZP_08412707.1| glutamate racemase [Rhodobacter sphaeroides WS8N] gi|332276097|gb|EGJ21412.1| glutamate racemase [Rhodobacter sphaeroides WS8N] Length = 270 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 42/222 (18%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70 ++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + +D H L+++ Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121 D L ++ACNTA ++ T+ LG + +A Q G Sbjct: 62 GCD-----LVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPRE 116 Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KE 173 +++ +TPAT+ S+ ++ + VE CG + + Sbjct: 117 VAVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG 164 Query: 174 DEIKKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211 DEI E + +E +R +L CTHYPL+ +F++ Sbjct: 165 DEILAEALVRSHVEALKRRMPHPQAAILGCTHYPLMEPIFQE 206 >gi|56964421|ref|YP_176152.1| glutamate racemase [Bacillus clausii KSM-K16] gi|81600804|sp|Q5WEL9|MURI_BACSK RecName: Full=Glutamate racemase gi|56910664|dbj|BAD65191.1| glutamate racemase [Bacillus clausii KSM-K16] Length = 276 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 8/210 (3%) Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85 L V ++ +P+ +Y+ D PYG ++ + +L + ++ VIACN Sbjct: 15 LTVASEIMRQLPKEPIVYIGDSARCPYGPRPVEEVRAFTWQMIGRLLHEDVKMI-VIACN 73 Query: 86 TAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144 TA ++ +E R+ + +G + P A +++ ++++ T T+ + +HS Sbjct: 74 TATAVVLEEARAQL-DIPVVGVIRPGAISAIQVSENRHVAVIGTIGTIASNAYTMALHSI 132 Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204 + ++ + VE+ IK E + + +G D ++L CTHYPL Sbjct: 133 DENVTVESLACPLFVPLVEQG----TIKGPEAEAVVRESLAPLQGAGFDTLILGCTHYPL 188 Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + V P V + + + AR LL Sbjct: 189 LKPVIEACLP-SVTVISSGEETAREVSSLL 217 >gi|295692284|ref|YP_003600894.1| glutamate racemase [Lactobacillus crispatus ST1] gi|295030390|emb|CBL49869.1| Glutamate racemase [Lactobacillus crispatus ST1] Length = 268 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/255 (22%), Positives = 115/255 (45%), Gaps = 35/255 (13%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83 V +K+ +P +++ D+ PYG+ + +K + FL LDK ++ + A Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRTKEEIIELVRKSVQFL----LDKNVKLI-IFA 72 Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIH 142 CNTA + +++ +G + + AA+ T++ ++++ST AT + I Sbjct: 73 CNTATAMAMSTIQAEIDPQ-IIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIR 131 Query: 143 SYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + + +++ LA VE ++ +K+ ++ +GK D +++ C Sbjct: 132 FRDPEIQVTELAAPKLAPLVEAQKDHETNLKV--------VKESLTPLQGKDFDTLIMGC 183 Query: 200 THYPLIVHVFRQ-LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD------HALFL 252 THYPLI F++ ++ V LD +D +A+ ++ R +F D H + Sbjct: 184 THYPLIQKEFKEAINDKNVTILDPADQVAQYTFNVMRRDG-----LFSDGNEKVSHEYYT 238 Query: 253 SGKPDIAMRRLMQGF 267 +G P + RL + F Sbjct: 239 TGDP-TSFDRLARTF 252 >gi|255263591|ref|ZP_05342933.1| glutamate racemase [Thalassiobium sp. R2A62] gi|255105926|gb|EET48600.1| glutamate racemase [Thalassiobium sp. R2A62] Length = 269 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 54/244 (22%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70 ++ +FDSG+GGL VL + +P+ F+Y AD PYG + ED +K + L+ + Sbjct: 2 AVGVFDSGLGGLTVLSAVAARLPDVPFVYYADSAHAPYGVRDAEDIFQLTEKAVRHLWDN 61 Query: 71 ILDKYQPVLSVIACNTA-FTLIKDELRSTFP-SMAFLGA-VPAIKQAAAYTQSGL----- 122 D L ++ACNTA ++ + P LG VP I+ A T+ Sbjct: 62 GCD-----LVILACNTASAAALRRMQEAGVPDGKRVLGVFVPLIE---ALTERDWGDNSP 113 Query: 123 --------ISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----- 168 +++ +TPAT+ R + L V VE ACG Sbjct: 114 PREVDVKHVALFATPATVSSRAFQRELAFRAVG-------------VDVEAQACGGVVDA 160 Query: 169 -----IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 + + E ++ ++ ++++ D +L CTHYPL+ +F+ V L + Sbjct: 161 IEEGDMILAEALVRSHVDA--LKRKMPTPDAAILGCTHYPLMQDIFQAALGPDVRVLSQA 218 Query: 224 DSIA 227 D +A Sbjct: 219 DLVA 222 >gi|332638684|ref|ZP_08417547.1| glutamate racemase [Weissella cibaria KACC 11862] Length = 281 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 11/200 (5%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I DSGIGGL V+++ +P+ YV D PYG + + +L K Sbjct: 5 AIGYIDSGIGGLTVVKQALKQIPDEQVYYVGDTARMPYGPRPQEEVLGFTWQMVRYLLKK 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 +L V+ACNTA +L++ + +G + P + A + G I +++T T++ Sbjct: 65 DIKML-VVACNTATAAALPDLQAKL-DIPVVGVIQPGVDAALRKSADGEIGVIATAGTVK 122 Query: 134 R-TYTSNLIHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 Y + L+ + + L + + + +Y ++ KE F + + Sbjct: 123 SLAYYNGLLQGNRAANVVQLAAPEFVDVAENHDYTSEFA---RQVVKEKLSYF---KNHQ 176 Query: 192 TDVIVLACTHYPLIVHVFRQ 211 D ++L CTH+PL+ + ++ Sbjct: 177 VDTLILGCTHFPLMENFIQE 196 >gi|114766197|ref|ZP_01445197.1| Glutamate racemase [Pelagibaca bermudensis HTCC2601] gi|114541568|gb|EAU44611.1| Glutamate racemase [Roseovarius sp. HTCC2601] Length = 270 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 34/218 (15%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-----HALKKRLMFL 67 ++ +FDSG+GGL VL + +PE F+Y AD PYG + +D A +RL Sbjct: 2 AVGVFDSGLGGLTVLDAVSKRLPEVPFVYFADSAHAPYGVRDADDIYNLTTAAVERLWEA 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG---- 121 D++ ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 GCDLV--------ILACNTASAAALRRMQESWIPRDKRVLGVFVPLIEAMTERQWGDNSP 113 Query: 122 -------LISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 +++ +TPAT+R R + L + + + L +EE + + E Sbjct: 114 PREVAVQHVALFATPATVRSRAFQRELAFRAIG-VDVEAQACGGLVDAIEE--GDMILAE 170 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 ++ ++ ++++ +L CTHYPL+ F++ Sbjct: 171 ALVRSHVDA--LKRKMPSPQAAILGCTHYPLMQETFQE 206 >gi|237744000|ref|ZP_04574481.1| glutamate racemase [Fusobacterium sp. 7_1] gi|229433031|gb|EEO43243.1| glutamate racemase [Fusobacterium sp. 7_1] Length = 257 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 14/225 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ ++ P+ IY AD FPYG LK + D Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTVEQLKTIIKNSI-DF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126 L + V+A N + D++++ + +G P +K + I + Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKN---NDKIIGIYPPLKDVIKDKMKNTLIIGAKVMI 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +P + Y + ++ Q H+ S +I + I E I+ I C E Sbjct: 117 ESPEL--QDYIKREVGNFYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--E 172 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 + + D I L+ TH P + F+++ P V D +D++ + + Sbjct: 173 NKFGKLDSITLSSTHLPWLFSYFKKIIP-EVKLYDPADNLVKAIK 216 >gi|254431905|ref|ZP_05045608.1| glutamate racemase [Cyanobium sp. PCC 7001] gi|197626358|gb|EDY38917.1| glutamate racemase [Cyanobium sp. PCC 7001] Length = 274 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 25/193 (12%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD--KY 75 +FDSG+GGL VL+K+ L P +Y+ D PYG ++ + ++++ ++ Sbjct: 7 LFDSGLGGLTVLRKVNQLYPHSPCLYLGDTARVPYGTRSPDEIRA----IAAEVVRWLRW 62 Query: 76 QPV-LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Q V + ++ACNT+ L D + P + I A+ S + +L+TPAT Sbjct: 63 QGVGVLLMACNTSNALALDVAVAEAGVPVLGL------IDSVASVISSDRVGVLATPATA 116 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK---EDEIKKEIEGCFIEKEG 189 R +Y H ++++ E+ I+ E+++ Sbjct: 117 RS-------GAYRRAIHASRPDALVIEVGCPEFVPLIEAGHRFSPELRRAALAYIAPLLA 169 Query: 190 KRTDVIVLACTHY 202 D +VL CTHY Sbjct: 170 AAVDTVVLGCTHY 182 >gi|85703353|ref|ZP_01034457.1| Glutamate racemase [Roseovarius sp. 217] gi|85672281|gb|EAQ27138.1| Glutamate racemase [Roseovarius sp. 217] Length = 270 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 38/219 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL V + +P+ F+Y+ D+ PYG + + L D L Sbjct: 2 AVGIFDSGLGGLTVWDAVSKRLPDVPFVYLGDNAHTPYGVRDADDIYD-LTTTSVDRLFA 60 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + +A Q G Sbjct: 61 AGCDLVILACNTASAAALRRMQESWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171 +++ +TPAT+R S+ ++ + VE ACG + + Sbjct: 121 NVALFATPATVR------------SRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDMIL 168 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 E ++ ++ ++++ + VL CTHYPL+ VF+ Sbjct: 169 AEALVRSHVDA--LKRKMPHPEAAVLGCTHYPLVQEVFQ 205 >gi|303246204|ref|ZP_07332485.1| glutamate racemase [Desulfovibrio fructosovorans JJ] gi|302492600|gb|EFL52471.1| glutamate racemase [Desulfovibrio fructosovorans JJ] Length = 297 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 6/199 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y D PYG + + + + +L K Sbjct: 36 IGIFDSGVGGLTVARAVMDRLPSESIVYFGDTARVPYGVKSPDTVARYAGQITNFLLAKN 95 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134 +L ++ACNT + + + P+ A A T++ I I++TP+T+ R Sbjct: 96 VKLL-IVACNTMAAVALPAITALSPAPVLEVISAGAASALAATRTKRIGIIATPSTIASR 154 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y S L + + + VEE + + E + D Sbjct: 155 AYESALAALGGPEVFTASKACPLFVPLVEEG----WLAHPATRLVAEEYLTPLLAENLDT 210 Query: 195 IVLACTHYPLIVHVFRQLS 213 ++L CTHYPL+ + +++ Sbjct: 211 LILGCTHYPLLAPLLAEVA 229 >gi|227500398|ref|ZP_03930460.1| possible glutamate racemase [Anaerococcus tetradius ATCC 35098] gi|227217461|gb|EEI82780.1| possible glutamate racemase [Anaerococcus tetradius ATCC 35098] Length = 250 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 23/213 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73 I +FDSG+GGL VL+++ +F Y D + PYG ++ L+ DI+D Sbjct: 4 IGVFDSGLGGLTVLRELSKTNKAQYF-YFGDTLRVPYGGRS----REELIGFACDIVDFL 58 Query: 74 -KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K+ VIACNT KD L + F+ + + A+ T G +L T T Sbjct: 59 EKFDIDYYVIACNTLSVTAKDFLVDKYKK-KFI-PITQMGLRASETYGGSFLVLGTKTT- 115 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMIL----ASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 I+S+ + ++ + I+ A+++ ++ + E++ I+ Sbjct: 116 --------INSHFYKNNLEKIPGNIVYEKAATKLVDFIESGNMASSELETYIDSYISLAN 167 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 K I+LACTHYP+I + + +D Sbjct: 168 EKEIANIILACTHYPIIKSKIENRLTYKANIID 200 >gi|329891275|ref|ZP_08269618.1| glutamate racemase [Brevundimonas diminuta ATCC 11568] gi|328846576|gb|EGF96140.1| glutamate racemase [Brevundimonas diminuta ATCC 11568] Length = 287 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 44/247 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL V +++ P FIY+ D PYG + + L + L + Sbjct: 2 AIGVFDSGVGGLTVHRELTTRFPTRDFIYLGDQAHAPYGGRSGEDIVE-LTRAGCERLFE 60 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSM--------AFLG-AVPAIKQAAAYTQS---- 120 + V+ACNTA + L+ T+ P M LG VP I+ A S Sbjct: 61 AGASVVVLACNTASAIALRRLQQTWIPGMREKLGRPVNVLGIIVPTIEAATGLPWSFEAE 120 Query: 121 -------------GLISILSTPAT-LRRTYTSNL------IHSYVSQCHIHLVSSMILAS 160 + + T AT + R Y + + + C L + L + Sbjct: 121 RESRMEGEKKQAIDITGVFCTAATAMSRVYEIEIDKRRDDLAVFTEACP-GLAGLIELGA 179 Query: 161 RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWL 220 EE + D +++ I G+ D +L CTHY ++ +F Q P V + Sbjct: 180 PPEELKVVVDDHVDALRRRI--------GRHPDKAILGCTHYEIVADLFAQALPPGVQVI 231 Query: 221 DNSDSIA 227 ++A Sbjct: 232 SQPAAVA 238 >gi|297562279|ref|YP_003681253.1| glutamate racemase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846727|gb|ADH68747.1| Glutamate racemase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 261 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 13/194 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG-NWEDHALKKRLMFLFSDILDK 74 I + DSGIG L +R P+ D P+G D + + L + Sbjct: 3 IALVDSGIGMLSTAAALRVARPDADLFLSMDPDHMPWGPRTPDEIVARALAGARAAQEAA 62 Query: 75 YQPVLS--VIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L V+ CNTA ELR+ F P + +G VPAIK AAA I++ ST AT Sbjct: 63 GDAALDAVVVPCNTASVHGLAELRAEFEPDVPVIGTVPAIKPAAAAGGP--IAVWSTAAT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 R Y L+ ++ + V+ LA VE + ++ +D + E + G Sbjct: 121 TRSGYQRQLVETFARGVEVTAVACAGLAEAVE--SADPRLIDDAVAYAAELTPGDVHG-- 176 Query: 192 TDVIVLACTHYPLI 205 +VL CTHY L+ Sbjct: 177 ---VVLGCTHYDLV 187 >gi|126643405|ref|YP_001086389.1| glutamate racemase [Acinetobacter baumannii ATCC 17978] Length = 188 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 4/121 (3%) Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168 PA+K A A T S I++L+T T++ +LI +Y + LV + LA ++E Sbjct: 22 PAVKPAVAMTLSKHIAVLATATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG--- 78 Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 K E+K ++ ++ D I+L CTHYP + +++ + ++ S+++ Sbjct: 79 -KAHTAEVKDYLKNILAPLVEQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTA 137 Query: 229 R 229 + Sbjct: 138 Q 138 >gi|163736577|ref|ZP_02143996.1| Glutamate racemase [Phaeobacter gallaeciensis BS107] gi|161390447|gb|EDQ14797.1| Glutamate racemase [Phaeobacter gallaeciensis BS107] Length = 269 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 40/220 (18%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL ++ +P+ F+Y D+ PYG + + + D+ K Sbjct: 2 AVGIFDSGLGGLTVLNAVQERLPDVDFLYYGDNAHAPYGVRDAEDIYQLTKAAVEDMWSK 61 Query: 75 YQPVLSVIACNTA-FTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSG----------- 121 L V+ACNTA ++ + P LG + +A Q G Sbjct: 62 -GCNLVVLACNTASAAALRRMQENGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IK 170 +++ +TPAT+ R + L + VE ACG + Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIG-------------VDVEAQACGGVVDAIEDGDMI 167 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + E ++ ++ ++++ +L CTHYPL+ +F+ Sbjct: 168 LAEALVRSHVDA--LKRKMPEPQAAILGCTHYPLMEEIFQ 205 >gi|269128064|ref|YP_003301434.1| glutamate racemase [Thermomonospora curvata DSM 43183] gi|268313022|gb|ACY99396.1| glutamate racemase [Thermomonospora curvata DSM 43183] Length = 270 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 16/247 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL V + + +P+ +Y+ D PYG ++ + + ++ + Sbjct: 6 IGIFDSGYGGLTVARAILDQLPDEPILYLGDSARQPYGPRPIAEVRAFALQMLDQLVAEG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134 +L VIACN+A + + R + PA ++AA T +G + +++T AT+ R Sbjct: 66 VKML-VIACNSASAAMLRDARERYDVPIVEVIKPATRRAARATTNGRVGLIATHATVTSR 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++ + HI L S + R E+ K E+ D Sbjct: 125 AYED----AFAAAPHIELTS--VACPRFVEFVEAGITKGPELLSVARSYLQPIVDAGCDT 178 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCL----LPRINTHQTRVFDDHA 249 ++L CTHYPL++ + V + +++ A+ R L L R T V H Sbjct: 179 LILGCTHYPLLIGAISYVVGDGVTLVSSAEETAKDVYRVLQDQGLARAETASPPV---HR 235 Query: 250 LFLSGKP 256 ++G P Sbjct: 236 FLVTGDP 242 >gi|88808406|ref|ZP_01123916.1| Glutamate racemase [Synechococcus sp. WH 7805] gi|88787394|gb|EAR18551.1| Glutamate racemase [Synechococcus sp. WH 7805] Length = 268 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 37/199 (18%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD--KY 75 +FDSG+GGL VL+++ IY+ D PYG+ ++ + S+++ ++ Sbjct: 7 LFDSGLGGLTVLRRVLERHGAVPTIYLGDTARVPYGSRSPSEIR----VIASEVVAWLRH 62 Query: 76 QPVLSVI-ACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Q V +V+ ACNT L +D E ++ P + +GA AAA + + +L+TPAT+ Sbjct: 63 QKVTTVVMACNTTNALARDVAEGKAGVPVVGLIGA------AAAMVRESRVGVLATPATV 116 Query: 133 RRTYTSNLIHS------YVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGC 183 + I + V Q V +I A + E Y I+ + ++ ++ Sbjct: 117 ASGAYRDSIEALHPGTLVVQQACPDFVP-LIEAGDLNCDELYRAAIRYLQPLLEASVQS- 174 Query: 184 FIEKEGKRTDVIVLACTHY 202 IVL CTHY Sbjct: 175 -----------IVLGCTHY 182 >gi|149204811|ref|ZP_01881774.1| Glutamate racemase [Roseovarius sp. TM1035] gi|149141780|gb|EDM29833.1| Glutamate racemase [Roseovarius sp. TM1035] Length = 270 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 46/223 (20%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70 ++ IFDSG+GGL V + +PE +Y+ D+ PYG + + + LF+ Sbjct: 2 AVGIFDSGLGGLTVWDAVSKRLPEVPLVYLGDNAHAPYGVRDADDIYDLTTSSVERLFAA 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121 D L ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 GCD-----LVILACNTASAAALRRMQESWVPRDKRVLGVFVPLIEALTERQWGDNSPPRE 116 Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--------- 168 +++ +TPAT+R S+ ++ + VE ACG Sbjct: 117 VAVKNVALFATPATVR------------SRAFQRELAFRAIGVDVEAQACGGVVDAIEDG 164 Query: 169 -IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + + E ++ ++ ++++ + VL CTHYPL+ VF+ Sbjct: 165 DMILAEALVRSHVDA--LKRKMPHPEAAVLGCTHYPLVQEVFQ 205 >gi|126737902|ref|ZP_01753632.1| glutamate racemase [Roseobacter sp. SK209-2-6] gi|126721295|gb|EBA17999.1| glutamate racemase [Roseobacter sp. SK209-2-6] Length = 269 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 46/223 (20%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70 ++ IFDSG+GGL VL + +P+ F+Y AD PYG + ED KK + ++S Sbjct: 2 AVGIFDSGLGGLTVLNAAQSRLPDVDFLYYADSARAPYGVRDAEDIYQLTKKAVAEMWSK 61 Query: 71 ILDKYQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG------- 121 D L ++ACNT A L + + LG + +A Q G Sbjct: 62 GCD-----LVILACNTASAAALRRMQEEGLPEGKRVLGVFVPLIEALTERQWGDNSPPRE 116 Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--------- 168 +++ +TPAT+ S+ ++ + VE ACG Sbjct: 117 VEVKHVALFATPATVS------------SRAFQRELAFRAIGVDVEAQACGGVVDAIEDG 164 Query: 169 -IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + + E ++ ++ ++++ +L CTHYPL+ F+ Sbjct: 165 DLILAEALVRSHVDA--LKRKMPEPQAAILGCTHYPLMEQDFQ 205 >gi|221639366|ref|YP_002525628.1| glutamate racemase [Rhodobacter sphaeroides KD131] gi|221160147|gb|ACM01127.1| Glutamate racemase [Rhodobacter sphaeroides KD131] Length = 266 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 42/219 (19%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSDILD 73 +FDSG+GGL VL ++ +PE F+Y D+ PYG + +D H L+++ D Sbjct: 1 MFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAEGCD 60 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG---------- 121 L ++ACNTA ++ T+ LG + +A Q G Sbjct: 61 -----LVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAV 115 Query: 122 -LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KEDEI 176 +++ +TPAT+ S+ ++ + VE CG + + DEI Sbjct: 116 KHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQGDEI 163 Query: 177 KKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211 E + +E +R +L CTHYPL+ +F++ Sbjct: 164 LAEALVRSHVEALKRRMPHPQAAILGCTHYPLMEPIFQE 202 >gi|163742776|ref|ZP_02150161.1| glutamate racemase [Phaeobacter gallaeciensis 2.10] gi|161384031|gb|EDQ08415.1| glutamate racemase [Phaeobacter gallaeciensis 2.10] Length = 269 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 40/220 (18%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL ++ +P+ F+Y D+ PYG + + + D+ K Sbjct: 2 AVGIFDSGLGGLTVLNAVQERLPDVDFLYYGDNAHAPYGVRDAEDIYQLTKAAVEDMWSK 61 Query: 75 YQPVLSVIACNTA-FTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSG----------- 121 L V+ACNTA ++ P LG + +A Q G Sbjct: 62 -GCNLVVLACNTASAAALRRMQEDGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IK 170 +++ +TPAT+ R + L + VE ACG + Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIG-------------VDVEAQACGGVVDAIEDGDMI 167 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + E ++ ++ ++++ +L CTHYPL+ +F+ Sbjct: 168 LAEALVRSHVDA--LKRKMPEPQAAILGCTHYPLMEEIFQ 205 >gi|154249839|ref|YP_001410664.1| glutamate racemase [Fervidobacterium nodosum Rt17-B1] gi|154153775|gb|ABS61007.1| glutamate racemase [Fervidobacterium nodosum Rt17-B1] Length = 276 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 106/221 (47%), Gaps = 16/221 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSGIGGL VL+K+ +P H+IYVAD + PYG ++ + +++K Sbjct: 2 NIGLFDSGIGGLSVLKKLIETLPA-HYIYVADTMRAPYGTKSSETIETFSREIIGFLMEK 60 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + ACNT+ + + + R+ F + + + A A+ Y + ++++ T T++ Sbjct: 61 KVERI-FAACNTSDSTL-SKYRNNF-RIPYHSIIQAGVSASKYER---VAVIGTHTTVQS 114 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-RTD 193 N + + + + + + S VEE + E +K ++E K + D Sbjct: 115 GIYKNALEAKGKK--VMQRPAQLFVSLVEEGIFYGNMVEAVVK-----FYLEPFRKFKPD 167 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++L CTH+P + + ++ V +D +D + R L+ Sbjct: 168 ELILGCTHFPFLKDIIMRVM-GNVRVIDPADELVREVSHLV 207 >gi|315638310|ref|ZP_07893491.1| glutamate racemase [Campylobacter upsaliensis JV21] gi|315481657|gb|EFU72280.1| glutamate racemase [Campylobacter upsaliensis JV21] Length = 248 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 31/235 (13%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + + Sbjct: 3 IGVFDSGVGGLSVLKSLYEANLFEEIIYYGDTARVPYGVKDKETIIKFCLEAL-EFFKSF 61 Query: 76 QPVLSVIACNTA--FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + +IACNTA + L R+ FP + A + I +++T AT+ Sbjct: 62 KIDMLIIACNTASAYALEALRARADFPIYGVIEAGVRATCKNLEDKDKEILVIATKATIN 121 Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE------ 186 R Y NL ++ + +++ + VEE GI EG F++ Sbjct: 122 SRQYQINLEKEGFTR--VKALATGLFVPMVEE---GI----------FEGEFLKSAFLHY 166 Query: 187 -KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 K+ K D ++LACTH+PL+ + + + ++I R N+H Sbjct: 167 FKDVKSPDALILACTHFPLLSKALSEFFGSKTRLIHSGEAIVE-----FLRENSH 216 >gi|254440325|ref|ZP_05053819.1| glutamate racemase [Octadecabacter antarcticus 307] gi|198255771|gb|EDY80085.1| glutamate racemase [Octadecabacter antarcticus 307] Length = 269 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 98/242 (40%), Gaps = 50/242 (20%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70 ++ IFDSG+GGL VL ++ +P+ F+Y AD PYG +D + LF Sbjct: 2 AVGIFDSGLGGLTVLDAVQQRLPDVPFVYYADSANAPYGVRTADDIYNLTTAATQALFDA 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 D L ++ACNTA ++ ++ VP K+ + + A Sbjct: 62 GCD-----LVILACNTASAAALRRMQESW--------VPKDKRVLG------VFVPLIEA 102 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG------- 168 R++ N V H+ L ++ ++SR VE ACG Sbjct: 103 MTERSWGDNSPPREVGVKHVALFATPATVSSRAFQRELAFRAIGVDVEGQACGGVVDAIE 162 Query: 169 ---IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 + + E ++ ++ ++++ D VL CTHYP++ F+ V +D Sbjct: 163 EGDMILAEALVRSHVDA--LKRKMPEPDAAVLGCTHYPMMQDAFQTALGADVKVFSQADL 220 Query: 226 IA 227 +A Sbjct: 221 VA 222 >gi|148239373|ref|YP_001224760.1| glutamate racemase [Synechococcus sp. WH 7803] gi|147847912|emb|CAK23463.1| Glutamate racemase [Synechococcus sp. WH 7803] Length = 268 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 9/116 (7%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 FDSG+GGL VL+++ IY+ D PYG+ ++ + + + D+ Q Sbjct: 8 FDSGLGGLTVLRRVLESHGGVPTIYLGDTARVPYGSRSPSEIRAIASEVVAWLRDQ-QVT 66 Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ACNT L +D E ++ P + +GA AAA + + +L+TPAT+ Sbjct: 67 TVVMACNTTNALARDVTEGQAGVPVVGLIGA------AAAMVRDSRVGVLATPATV 116 >gi|254453816|ref|ZP_05067253.1| glutamate racemase [Octadecabacter antarcticus 238] gi|198268222|gb|EDY92492.1| glutamate racemase [Octadecabacter antarcticus 238] Length = 269 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 98/242 (40%), Gaps = 50/242 (20%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70 ++ IFDSG+GGL VL ++ +P+ F+Y AD PYG +D + LF Sbjct: 2 AVGIFDSGLGGLTVLDAVQQRLPDVPFVYYADSANAPYGVRTADDIYNLTTAATQALFDA 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 D L ++ACNTA ++ ++ VP K+ + + A Sbjct: 62 GCD-----LVILACNTASAAALRRMQESW--------VPKDKRVLG------VFVPLIEA 102 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG------- 168 R++ N V H+ L ++ ++SR VE ACG Sbjct: 103 MTERSWGDNSPPREVGVKHVALFATPATVSSRAFQRELAFRAIGVDVEGQACGGVVDAIE 162 Query: 169 ---IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 + + E ++ ++ ++++ D VL CTHYP++ F+ V +D Sbjct: 163 EGDMILAEALVRSHVDA--LKRKMPEPDAAVLGCTHYPMMQDAFQAALGADVKVFSQADL 220 Query: 226 IA 227 +A Sbjct: 221 VA 222 >gi|227877591|ref|ZP_03995646.1| glutamate racemase [Lactobacillus crispatus JV-V01] gi|256844565|ref|ZP_05550051.1| glutamate racemase [Lactobacillus crispatus 125-2-CHN] gi|256849046|ref|ZP_05554479.1| glutamate racemase [Lactobacillus crispatus MV-1A-US] gi|262047528|ref|ZP_06020483.1| glutamate racemase [Lactobacillus crispatus MV-3A-US] gi|293381594|ref|ZP_06627581.1| glutamate racemase [Lactobacillus crispatus 214-1] gi|227862815|gb|EEJ70279.1| glutamate racemase [Lactobacillus crispatus JV-V01] gi|256613643|gb|EEU18846.1| glutamate racemase [Lactobacillus crispatus 125-2-CHN] gi|256713822|gb|EEU28810.1| glutamate racemase [Lactobacillus crispatus MV-1A-US] gi|260572104|gb|EEX28669.1| glutamate racemase [Lactobacillus crispatus MV-3A-US] gi|290921864|gb|EFD98879.1| glutamate racemase [Lactobacillus crispatus 214-1] Length = 268 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 96/210 (45%), Gaps = 23/210 (10%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83 V +K+ +P +++ D+ PYG+ + +K + FL + L + A Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRTKEEIIELVRKSVQFLLEKNVK-----LIIFA 72 Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIH 142 CNTA + +++ +G + + AA+ T++ ++++ST AT + I Sbjct: 73 CNTATAMAMSTIQAEIDPQ-IIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIR 131 Query: 143 SYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + + +++ LA VE ++ +K+ ++ +GK D +++ C Sbjct: 132 FRDPEIQVTELAAPKLAPLVEAQKDHETNLKV--------VKESLTPLQGKDFDTLIMGC 183 Query: 200 THYPLIVHVFRQ-LSPWPVDWLDNSDSIAR 228 THYPLI F++ ++ V LD +D +A+ Sbjct: 184 THYPLIQKEFKEAINDKNVTILDPADQVAQ 213 >gi|256852216|ref|ZP_05557602.1| glutamate racemase [Lactobacillus jensenii 27-2-CHN] gi|260661752|ref|ZP_05862663.1| glutamate racemase [Lactobacillus jensenii 115-3-CHN] gi|282932656|ref|ZP_06338070.1| glutamate racemase [Lactobacillus jensenii 208-1] gi|256615262|gb|EEU20453.1| glutamate racemase [Lactobacillus jensenii 27-2-CHN] gi|260547499|gb|EEX23478.1| glutamate racemase [Lactobacillus jensenii 115-3-CHN] gi|281303230|gb|EFA95418.1| glutamate racemase [Lactobacillus jensenii 208-1] Length = 265 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 28/220 (12%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83 VL+K+ +P +++ D PYG+ + +K + FL S K V+ + A Sbjct: 18 VLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIELTRKSVDFLLS----KNVKVI-IFA 72 Query: 84 CNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 CNT A +I+ E+ + G++ AA T++ ++++ T T+ S Sbjct: 73 CNTATAAAMEVIQKEIAPQIIGVIQSGSLA----AAKITKNNKVAVIGTHVTIESHAYSK 128 Query: 140 LIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 I + +++ LA VE ++A + + D + +GK D +V Sbjct: 129 EIKFRNPDIKVTELATPKLAPLVEAQRDFAYNVDVVRDSLD--------SLKGKDFDTMV 180 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 L CTHYP+I ++ + +D +D +A+ +L R Sbjct: 181 LGCTHYPIIEKEISEIVGSTIKLVDPADQVAQYTENILKR 220 >gi|260663402|ref|ZP_05864293.1| glutamate racemase [Lactobacillus fermentum 28-3-CHN] gi|260552254|gb|EEX25306.1| glutamate racemase [Lactobacillus fermentum 28-3-CHN] Length = 268 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 16/258 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V++ ++ +P I+V D FPYG +D A + Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGT-KDQAEVR 51 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L L K+ + V+ACNTA L++ + +G + P + A A + G Sbjct: 52 QLALSIGAFLLKHDVKMMVVACNTATAAALPALQAAL-PIPVIGVIEPGARAALAQDKKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T AT I + ++ + V E+ K E+ E Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIV-EHGQTETAKAQEVVSEQL 169 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 F E K +++ CTH+P + + V +D + A+ L + Sbjct: 170 MTFKEHPVK---TLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226 Query: 242 TRVFDDHALFLSGK-PDI 258 ++ L+ +G PD+ Sbjct: 227 NHAHPNYHLYSTGNLPDL 244 >gi|297205618|ref|ZP_06923014.1| glutamate racemase [Lactobacillus jensenii JV-V16] gi|297150196|gb|EFH30493.1| glutamate racemase [Lactobacillus jensenii JV-V16] Length = 265 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 28/220 (12%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83 VL+K+ +P +++ D PYG+ + +K + FL S K V+ + A Sbjct: 18 VLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIELTRKSVDFLLS----KNVKVI-IFA 72 Query: 84 CNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 CNT A +I+ E+ + G++ AA T++ ++++ T T+ S Sbjct: 73 CNTATAAAMEVIQKEIAPKIIGVIQSGSLA----AAKITKNNKVAVIGTHVTIESHAYSK 128 Query: 140 LIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 I + +++ LA VE ++A + + D + +GK D +V Sbjct: 129 EIKFRNPDIKVTELATPKLAPLVEAQRDFAYNVDVVRDSLD--------SLKGKDFDTMV 180 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 L CTHYP+I ++ + +D +D +A+ +L R Sbjct: 181 LGCTHYPIIEKEISEIVGSTIKLVDPADQVAQYTENILKR 220 >gi|84515579|ref|ZP_01002941.1| Glutamate racemase [Loktanella vestfoldensis SKA53] gi|84510862|gb|EAQ07317.1| Glutamate racemase [Loktanella vestfoldensis SKA53] Length = 270 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 54/227 (23%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--------NWEDHALKKRLMF 66 ++ IFDSG+GGL VL + +P+ +Y+ D PYG N A ++ Sbjct: 2 AVGIFDSGLGGLTVLDAVAKRLPDVPLVYLGDSAHAPYGVRTPDDIYNLTTAATQR---- 57 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA--FLGAVPAIKQAAAYTQSG--- 121 LF D L ++ACNTA ++ ++ LG + +A Q G Sbjct: 58 LFDAGCD-----LVILACNTASAAALRRMQESWVPQGKRVLGVFVPLIEALTERQWGDNS 112 Query: 122 --------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----- 168 +++ +TPAT+ S+ ++ + VE ACG Sbjct: 113 PPREVAIKHVALFATPATVS------------SRAFQRELAFRAIGVDVEAQACGGVVDA 160 Query: 169 -----IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + + E ++ ++ + ++ D VL CTHYPL+ VF+ Sbjct: 161 IEDGDMILAEALVRSHVDA--LRRKMPNPDAAVLGCTHYPLMEKVFQ 205 >gi|86138828|ref|ZP_01057400.1| glutamate racemase [Roseobacter sp. MED193] gi|85824475|gb|EAQ44678.1| glutamate racemase [Roseobacter sp. MED193] Length = 269 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 46/223 (20%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70 ++ IFDSG+GGL VL+ + +P+ F+Y AD PYG + ED + K + ++S Sbjct: 2 AVGIFDSGLGGLTVLKAAQSRLPDVDFLYYADSARAPYGVRDAEDIFNLTKAAVNDMWSK 61 Query: 71 ILDKYQPVLSVIACNTA-FTLIKDELRSTFPSMA-FLGAVPAIKQAAAYTQSG------- 121 D L ++ACNTA ++ P+ LG + +A Q G Sbjct: 62 GCD-----LVILACNTASAAALRRMQEEGLPAGKRVLGVFVPLIEAMTERQWGDNSPPRE 116 Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--------- 168 +++ +TPAT+ S+ ++ + VE ACG Sbjct: 117 VEVKHVALFATPATVS------------SRAFQRELAFRAIGVDVEAQACGGIVDAIEDG 164 Query: 169 -IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + + E ++ ++ ++++ + +L CTHYPL+ F+ Sbjct: 165 DMILAEALVRSHVDA--LKRKMPEPEAAILGCTHYPLMEKEFQ 205 >gi|149914761|ref|ZP_01903291.1| indolepyruvate ferredoxin oxidoreductase [Roseobacter sp. AzwK-3b] gi|149811554|gb|EDM71389.1| indolepyruvate ferredoxin oxidoreductase [Roseobacter sp. AzwK-3b] Length = 270 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 38/220 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + S + D Sbjct: 2 AVGIFDSGLGGLTVLDAVEKRLPDVPFVYFGDNAHAPYGVRDADDVYDLTTRAVSRLWDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ + LG + +A Q G Sbjct: 62 GCD-LVILACNTASAAALRRMQENWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171 +++ +TPAT+ S+ ++ + VE ACG + + Sbjct: 121 HVALFATPATVS------------SRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDMIL 168 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 E ++ ++ ++++ + +L CTHYPL+ + F++ Sbjct: 169 AEALVRSHVDA--LKRKMPNPEAAILGCTHYPLMQNAFQE 206 >gi|315606165|ref|ZP_07881193.1| glutamate racemase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312123|gb|EFU60212.1| glutamate racemase [Actinomyces sp. oral taxon 180 str. F0310] Length = 276 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 32/227 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ IY+ D PYG+ ++ + ++ + Sbjct: 6 IGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGSRAIAQVRSLTLSALDELASRG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTF------PSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L VIACNTA + R + P + + PA +Q+ + T++ + ++ T Sbjct: 66 VKAL-VIACNTATAAALADARERYWIDAGIPVIEVI--TPAARQSVSATRNRHVGVIGTK 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC---------GIKIKEDEIKKEI 180 AT++ S+ ++ +++ + RV + AC G+ DEI+ Sbjct: 123 ATIQ------------SEAYLRALAA-VPGLRVTQQACPAFVDFVEAGVTTG-DEIEAVA 168 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + D ++L CTHYPL+ V ++ V + +S++ A Sbjct: 169 TEYLTPLKAAGVDTLILGCTHYPLLTGVISRVMGDGVTLVTSSEATA 215 >gi|260497932|ref|ZP_05816049.1| glutamate racemase [Fusobacterium sp. 3_1_33] gi|260196493|gb|EEW94023.1| glutamate racemase [Fusobacterium sp. 3_1_33] Length = 257 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 14/225 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ ++ P+ IY AD FPYG LK + D Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTVEQLKTIIKNSI-DF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126 L + V+A N + D++++ + +G P +K + I + Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKN---NDKVIGIYPPLKDVIKDKMKNTLIIGAKVMI 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +P + Y + + Q H+ S +I + I E I+ I C E Sbjct: 117 ESPEL--QDYIKREVGNSYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--E 172 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 + + D I L+ TH P + F+++ P V D +D++ + + Sbjct: 173 NKFGKLDSITLSSTHLPWLFSYFKKIIP-EVKLYDPADNLVKAIK 216 >gi|256027385|ref|ZP_05441219.1| Asp/Glu racemase [Fusobacterium sp. D11] gi|289765349|ref|ZP_06524727.1| glutamate racemase [Fusobacterium sp. D11] gi|289716904|gb|EFD80916.1| glutamate racemase [Fusobacterium sp. D11] Length = 257 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 14/225 (6%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ ++ P+ IY AD FPYG LK + D Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTIEQLKTIIKNSI-DF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126 L + V+A N + D++++ + +G P +K + I + Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKN---NDKVIGIYPPLKDVIKDKMKNTLIIGAKVMI 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +P + Y + + Q H+ S +I + I E I+ I C E Sbjct: 117 ESPEL--QDYIKREVGNSYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--E 172 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 + + D I L+ TH P + F+++ P V D +D++ + + Sbjct: 173 NKFGKLDSITLSSTHLPWLFSYFKKIIP-EVKLYDPADNLVKAIK 216 >gi|238855622|ref|ZP_04645923.1| glutamate racemase [Lactobacillus jensenii 269-3] gi|260665318|ref|ZP_05866166.1| glutamate racemase [Lactobacillus jensenii SJ-7A-US] gi|282933004|ref|ZP_06338398.1| glutamate racemase [Lactobacillus jensenii 208-1] gi|238831766|gb|EEQ24102.1| glutamate racemase [Lactobacillus jensenii 269-3] gi|260560822|gb|EEX26798.1| glutamate racemase [Lactobacillus jensenii SJ-7A-US] gi|281302858|gb|EFA95066.1| glutamate racemase [Lactobacillus jensenii 208-1] Length = 266 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 22/217 (10%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83 VL+K+ +P +++ D PYG+ + ++ + FL S + + + A Sbjct: 18 VLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIELTRRSVNFLLSKNVK-----VIIFA 72 Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIH 142 CNTA + ++ + +G + + AAA T++ ++++ T T+ S I Sbjct: 73 CNTATAAAMEVIQKEI-TPQIIGVIQSGSLAAARTTKNNKVAVIGTHVTIESHAYSREIK 131 Query: 143 SYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + +++ LA VE +YA I + D + E F D +VL C Sbjct: 132 FRNPDIEVTELATPQLAPLVEAQRDYAYNIDVVRDSLDSLKEKEF--------DTMVLGC 183 Query: 200 THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 THYP+I ++ + +D +D +A+ +L R Sbjct: 184 THYPIIEKEISKVVGSTIKLVDPADQVAQYTENVLKR 220 >gi|15615633|ref|NP_243937.1| glutamate racemase [Bacillus halodurans C-125] gi|10175693|dbj|BAB06790.1| glutamate racemase [Bacillus halodurans C-125] Length = 200 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 22/163 (13%) Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 VIACNTA ++ DE++ P + +G V P A T++ ++++ T T++ Sbjct: 3 VIACNTAAAVVLDEVKEKLP-IPVVGVVQPGAISALKVTKNEHVAVIGTTGTIQ------ 55 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEI---KKEIEGC---FIEKEGKR 191 S + H + + +VE AC + + E I + +E C +GK Sbjct: 56 ------SGAYEHTLKKINNRVQVESLACPPFVPLVERGIFSGPEALETCSETLKPLQGKG 109 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 D ++L CTHYPL+ V +++ + + + D AR LL Sbjct: 110 FDTLILGCTHYPLLKPVIQEVMGPDIQIISSGDETAREVSGLL 152 >gi|78777751|ref|YP_394066.1| glutamate racemase [Sulfurimonas denitrificans DSM 1251] gi|78498291|gb|ABB44831.1| glutamate racemase [Sulfurimonas denitrificans DSM 1251] Length = 247 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 12/191 (6%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSGIGGL V++ + IY D PYG +D + R + ++ Sbjct: 5 VFDSGIGGLTVVKSLLENKLFEEIIYFGDTARVPYG-IKDKSTIIRYAIEAVEFFKNFEL 63 Query: 78 VLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-R 134 L ++ACNT E+R S+ P + + A A ++ I IL T AT+ + Sbjct: 64 DLIIVACNTVSAHALSEMREASSCPVIGVVEAGILATANALKDKNSNILILGTKATINSK 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y L ++ ++ + VEE +I + +K KE ++ D Sbjct: 124 AYEIGLNAEGFK--NLQAKATGLFVPIVEEEIYSGEILDATMKHYF------KEIQKPDA 175 Query: 195 IVLACTHYPLI 205 I+L CTH+PLI Sbjct: 176 IILGCTHFPLI 186 >gi|315037664|ref|YP_004031232.1| glutamate racemase [Lactobacillus amylovorus GRL 1112] gi|312275797|gb|ADQ58437.1| glutamate racemase [Lactobacillus amylovorus GRL 1112] Length = 268 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 96/210 (45%), Gaps = 23/210 (10%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83 V +K+ +P +++ D+ PYG+ + +K + FL + L + A Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRIKEEIIELVRKSVQFLLEKNVK-----LIIFA 72 Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIH 142 CNTA + +++ +G + + AA+ T++ ++++ST AT + I Sbjct: 73 CNTATAMAMSTIQAEIDPQ-IIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIR 131 Query: 143 SYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + + +++ LA VE ++ +K+ ++ +GK D +++ C Sbjct: 132 FRDPEIQVTELAAPKLAPLVEAQKDHETNLKV--------VKESLTPLQGKDFDTLIMGC 183 Query: 200 THYPLIVHVFRQ-LSPWPVDWLDNSDSIAR 228 THYPLI F++ ++ V LD +D +A+ Sbjct: 184 THYPLIQKEFKEAINDKNVTILDPADQVAQ 213 >gi|146276946|ref|YP_001167105.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17025] gi|189030366|sp|A4WQY6|MURI_RHOS5 RecName: Full=Glutamate racemase gi|145555187|gb|ABP69800.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17025] Length = 270 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 48/225 (21%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH-------ALKKRLMFL 67 ++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + A +RL Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFALTCAATERLWAE 61 Query: 68 FSDILDKYQPVLSVIACNTA-FTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSG---- 121 D++ ++ACNTA +K S P LG + +A Q G Sbjct: 62 GCDLV--------ILACNTASAAALKRMQESWIPRDKRVLGVFVPLIEALTERQWGDNSP 113 Query: 122 -------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI--- 171 +++ +TPAT+ S+ ++ + VE CG + Sbjct: 114 PREVAVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAI 161 Query: 172 -KEDEIKKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211 + DEI E + +E +R +L CTHYPL+ F++ Sbjct: 162 EQGDEILAEALVRSHVEALKRRMPHPQAAILGCTHYPLMEATFQE 206 >gi|254419828|ref|ZP_05033552.1| Asp/Glu/Hydantoin racemase superfamily [Brevundimonas sp. BAL3] gi|196186005|gb|EDX80981.1| Asp/Glu/Hydantoin racemase superfamily [Brevundimonas sp. BAL3] Length = 285 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 42/245 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL V +++ P+ F+Y+AD PYG + + L + L + Sbjct: 2 AIGVFDSGVGGLTVHRELTRRFPQRDFVYLADQAHAPYGGRGGEDIVE-LTRAGCERLFE 60 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSM--------AFLG-AVPAIKQAAAYTQS---- 120 + V+ACNTA + L+ T+ P + LG VP I+ A S Sbjct: 61 AGASVVVLACNTASAIALRRLQQTWIPGLRERLGRPVNVLGIIVPTIEAATGKPWSFEAE 120 Query: 121 -----------GLISILSTPAT-LRRTYTSNL------IHSYVSQCHIHLVSSMILASRV 162 + + T AT + R + + I + C L + L + Sbjct: 121 RAAEGDKVEAIAVTGVFCTAATAISRVFEIEIDKRREDIAVFSEPCP-GLAGLIELGAPR 179 Query: 163 EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 EE + D +++ I G+ D +L CTHY +I +F P ++ Sbjct: 180 EELKVVVDDHVDALRRRI--------GRHPDKAILGCTHYEIIAELFASALPAGTVLINQ 231 Query: 223 SDSIA 227 ++A Sbjct: 232 PTAVA 236 >gi|320095955|ref|ZP_08027573.1| glutamate racemase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977112|gb|EFW08837.1| glutamate racemase [Actinomyces sp. oral taxon 178 str. F0338] Length = 275 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 42/241 (17%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I IFDSG+GGL V + + +P+ +Y+ D PYG ++ Sbjct: 1 MDNAP--------IGIFDSGLGGLTVARAVIDKLPDEEVVYLGDTRHTPYGPRPVAQVRT 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF------PSMAFLGAVPAIKQAAA 116 + + L +IACNTA + R + P + + PA +QA Sbjct: 53 YTLACLDQLASMGVKAL-IIACNTATAAALADARERYWVDAGIPVIEVI--TPAARQAVT 109 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR-----VEEYACGIKI 171 T++G I ++ T AT++ S+++ + V + L R VE GI Sbjct: 110 ATRNGRIGVIGTRATIQSEAYSHVLAA---------VPGLSLTQRECPRFVEFVEAGIT- 159 Query: 172 KEDEIKKEIEGCFIE-----KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 E+E + KE D +VL CTHYPL+ V ++ V + +S++ Sbjct: 160 ----TGAELEAVATQYLAPLKEAG-VDTLVLGCTHYPLLTGVIGRVMGEEVALVTSSEAT 214 Query: 227 A 227 A Sbjct: 215 A 215 >gi|54027044|ref|YP_121286.1| putative glutamate racemase [Nocardia farcinica IFM 10152] gi|54018552|dbj|BAD59922.1| putative glutamate racemase [Nocardia farcinica IFM 10152] Length = 253 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 11/213 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L P+ + D G P+G + +R++ + Sbjct: 3 VALIDSGLGLLPTAAWLRKLRPDVDLLLQLDPDGAPWGPKPEQWTIERVVAAARISIAAG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ V+ CNTA +++R+ P + +G VPAIK AAA + + + R Sbjct: 63 AEVI-VLPCNTASVTALEQVRAEVGPEVPVIGTVPAIKPAAAACRRVAVWATAATTASR- 120 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y + LI + + V+ LA ++ + + + T+ Sbjct: 121 -YQAELIEKFGGDAEVVGVACHGLADAIDR-------GDLTAATDAIARAAAQTPAGTEG 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 +VL CTHYPL+V P V D++ ++A Sbjct: 173 VVLGCTHYPLVVDAIVAALPAGVRLFDSAQAVA 205 >gi|294676108|ref|YP_003576723.1| glutamate racemase [Rhodobacter capsulatus SB 1003] gi|294474928|gb|ADE84316.1| glutamate racemase [Rhodobacter capsulatus SB 1003] Length = 270 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 30/216 (13%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK----KRLMFLFSD 70 ++ +FDSG+GGL V + + +PE F+Y D+ PYG + + + L+ + Sbjct: 2 AVGVFDSGLGGLTVYEAVSKRLPEVAFVYYGDNAHAPYGVRTPDDIYNLTCRGVQRLWDE 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121 D L ++ACNTA ++ + LG + +A Q G Sbjct: 62 GCD-----LVILACNTASAAALKRMQEHWIPKDKRVLGVFVPLIEALTERQWGDNSPPRE 116 Query: 122 ----LISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI-KEDE 175 +++ +TPAT+ R + L + + V + V+ G +I E Sbjct: 117 VAVKHVALFATPATVASRAFQRELAYRAIGVD----VEAQPCGGVVDAIEAGDEILAEAL 172 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 ++ +E +++ + +L CTHYPL+ F++ Sbjct: 173 VRSHVEA--LKRRMPHPEAAILGCTHYPLMQKTFQE 206 >gi|309812185|ref|ZP_07705943.1| glutamate racemase [Dermacoccus sp. Ellin185] gi|308433872|gb|EFP57746.1| glutamate racemase [Dermacoccus sp. Ellin185] Length = 266 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 12/216 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL V + + +P IY+ D PYG +++ + ++++ Sbjct: 6 IGIFDSGYGGLTVARAVLDQLPHEKIIYLGDTARAPYGPRPIAEVRQYAIECLDSLVEQG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACN+A + + R + PA ++AAA T++ + ++ST AT + Sbjct: 66 VKAL-VIACNSASAAVLHDARERYDVPVVEVIRPATRRAAAATRNNRVGVISTEATHQ-- 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEKEGKRT 192 + S+ + + +SS+ VE GI + + K ++G E Sbjct: 123 -SGAYTDSFAAAPQVK-ISSVPCPRFVEFVEAGITSGPELLTVAHKYLDGLVDEG----V 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYPL+ V + V + +++ A+ Sbjct: 177 DTLILGCTHYPLLTGVISYVVGSTVTLVSSAEETAK 212 >gi|114771082|ref|ZP_01448522.1| Glutamate racemase [alpha proteobacterium HTCC2255] gi|114548364|gb|EAU51250.1| Glutamate racemase [alpha proteobacterium HTCC2255] Length = 269 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 29/255 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V Q++ +P+ +Y+ D+ PYG DH +++ L + +++ Sbjct: 3 IGIFDSGLGGLTVQQEIASRIPDQSLVYLGDNKYAPYG-VRDH---EQIYSLTQNAIERL 58 Query: 76 QPV---LSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG--------- 121 L ++ACNTA + ++ + + LG + +A Q G Sbjct: 59 WNAGCDLVIVACNTASAVAVKRMQEEWLPENKRVLGVFVPLIEAVTERQWGDNSAPKEVG 118 Query: 122 --LISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +++ +TPAT+ R + L + + L +EE ++ E ++ Sbjct: 119 VKQVALFATPATVATRAFQRELAFRAIG-VDVEAQPCGGLVDAIEEN--DFELAEALVQS 175 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + + VL CTHYP++ F + V + A L+ +N Sbjct: 176 HVSALL--RRMPNPQAAVLGCTHYPILKKCFEKALGPNVQVYSQGRIV---AESLMHYLN 230 Query: 239 THQTRVFDDHALFLS 253 H ALFL+ Sbjct: 231 RHPRFKEKGEALFLT 245 >gi|291277066|ref|YP_003516838.1| putative glutamate racemase [Helicobacter mustelae 12198] gi|290964260|emb|CBG40109.1| putative glutamate racemase [Helicobacter mustelae 12198] Length = 309 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 22/197 (11%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILD 73 IFDSG GGL VL+ + IY D PYG ++ + L FL +D Sbjct: 5 IFDSGAGGLSVLEHVLRAEIFDSIIYYGDTARLPYGTKHPDSIICFCLEALEFLLVQNVD 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTP 129 + ++ACNTA D ++ P + +G + AIK + ++ +L T Sbjct: 65 -----IIIVACNTASAHALDAMQKAAPKIPIIGVIEPGILAIKNRLKNLDAKIL-VLGTK 118 Query: 130 ATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT++ Y +L + +I + + + S VEE I E + +E + Sbjct: 119 ATIQSAQYQRHL--EKLGYSNITAIPTSLFVSLVEE-----GIFEGPLVEECLRYYFGGI 171 Query: 189 GKRTDVIVLACTHYPLI 205 D I+L CTH+PL+ Sbjct: 172 DFVPDAIILGCTHFPLL 188 >gi|296137849|ref|YP_003645092.1| glutamate racemase [Tsukamurella paurometabola DSM 20162] gi|296025983|gb|ADG76753.1| Glutamate racemase [Tsukamurella paurometabola DSM 20162] Length = 265 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 19/221 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG G + + L P+ + D PYG + + + + +Y Sbjct: 3 VAVIDSGFGMVNYADALSRLRPDTELVLARDPDNMPYGLLPPERISE-CIVAMAGAAARY 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V+ACNT + R+ F P++ +G VPAI+ A A + ++ +T A Sbjct: 62 RVDAIVVACNTGSMYALEAARARFEPAVPVIGVVPAIRPAGATGRP--FAVWATAAATVS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++LI ++ LA R+ Y I ++ + + + D+ Sbjct: 120 DYQTSLIDAFADPS---------LAHRIPCYGLAEAIDSGDLDRVADAVAAAADATPPDI 170 Query: 195 --IVLACTHYPL----IVHVFRQLSPWPVDWLDNSDSIARR 229 +VL CTHY L IV R + + D+ + +AR+ Sbjct: 171 ESVVLGCTHYGLVREQIVAALRARTGVDLTVFDSPEPVARQ 211 >gi|57241965|ref|ZP_00369905.1| glutamate racemase [Campylobacter upsaliensis RM3195] gi|57017157|gb|EAL53938.1| glutamate racemase [Campylobacter upsaliensis RM3195] Length = 248 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 33/234 (14%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL+ + IY D PYG + + K + + ++ Sbjct: 5 VFDSGVGGLSVLKSLYEANLFEEIIYYGDTARVPYGVKDKETIIKFCLEAL-EFFKSFKI 63 Query: 78 VLSVIACNTA--FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + +IACNTA + L R+ FP + A + I +++T AT+ Sbjct: 64 DMLIIACNTASAYALEALRARADFPIYGVIEAGVRATCKNLQDKDKEILVIATKATINS- 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIE------- 186 Q I L +RV+ A G + + E+ I EG F++ Sbjct: 123 ----------KQYQISLKKEGF--TRVKALATGLFVPMVEEGI---FEGEFLKSAFLHYF 167 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 K+ K D ++LACTH+PL+ + + + ++I R N+H Sbjct: 168 KDVKSPDALILACTHFPLLSKALSEFFGSKTRLIHSGEAIVE-----FLRENSH 216 >gi|311895050|dbj|BAJ27458.1| putative glutamate racemase [Kitasatospora setae KM-6054] Length = 252 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 90/215 (41%), Gaps = 11/215 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + D G P+G + + + Sbjct: 3 IALVDSGIGLLAAAAAIRRLRPDADLVVSCDPDGMPWGPRTPEDITAHALACAR-AAVAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P V+ACNTA LR+ F P++ +G VPAIK AAA ++I +T T Sbjct: 62 RPDALVVACNTASVHALAHLRAEFEPALPVIGTVPAIKPAAAAGGV--VAIWATSRTTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + +H V+ LA VE + I + TDV Sbjct: 120 AYQRGLIEEFGGAARVHEVACHGLAEAVE------RADRAAIAAAVASAAARTPADTTDV 173 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 VL CTHY LI + P P ++D+IA + Sbjct: 174 -VLGCTHYELIDDLIAAALPGPARLHGSADAIAAQ 207 >gi|237752367|ref|ZP_04582847.1| glutamate racemase [Helicobacter winghamensis ATCC BAA-430] gi|229375856|gb|EEO25947.1| glutamate racemase [Helicobacter winghamensis ATCC BAA-430] Length = 258 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 21/200 (10%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHF---IYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG GG+ VL+ L+ ++F +Y D PYG +++ + + L Sbjct: 13 IGVFDSGAGGISVLKN---LIESHNFKEILYYGDTARVPYGVKSKDTIRQYSL----EAL 65 Query: 73 DKYQPV---LSVIACNTA--FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 D + P L ++ACNTA + L + + +P + + Q A ++ I IL Sbjct: 66 DFFSPFKLDLLIVACNTASAYGLSAMQEVAPYPVIGVIEPGILALQNAIQDKNAKILILG 125 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ S L+ L +S+ + VEE I E I ++++ Sbjct: 126 TKATICSNLYSKLLREKGYLNTFGLATSLFVP-IVEE-----GIFEGAILDSTIAHYLKQ 179 Query: 188 EGKRTDVIVLACTHYPLIVH 207 + I+L CTH+PLI + Sbjct: 180 YPSTPNAIILGCTHFPLIAN 199 >gi|269795791|ref|YP_003315246.1| glutamate racemase [Sanguibacter keddieii DSM 10542] gi|269097976|gb|ACZ22412.1| glutamate racemase [Sanguibacter keddieii DSM 10542] Length = 268 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 20/222 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P Y+ D PYG ++ + + ++D+ Sbjct: 6 IGIFDSGVGGLTVARSILDQLPHESIHYIGDTRHSPYGPKPLATVRALALDVMDSLVDQG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 +L VIACN+A + + R + + V PA ++A A T++G + ++ T AT Sbjct: 66 VKML-VIACNSASAAVLRDARERYTVRHGIPVVEVILPAARRAVAATRTGRVGVIGTRAT 124 Query: 132 LR-RTYTSNLIH----SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 + R Y L S Q VS ++ S V +++ ++ I Sbjct: 125 IESRAYEDALAVAAGISVTGQACPDFVS--LVESGVTSGPAVLEVSRRYLEPVI------ 176 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYPL+ + V + +++ A+ Sbjct: 177 --AADVDTLILGCTHYPLLTGAISYVMGESVTLVSSAEETAK 216 >gi|293596521|ref|ZP_06684239.1| glutamate racemase [Listeria monocytogenes J2818] gi|293589867|gb|EFF98201.1| glutamate racemase [Listeria monocytogenes J2818] Length = 176 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 3/122 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ +L VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TL 132 T+ Sbjct: 119 TV 120 >gi|119386680|ref|YP_917735.1| glutamate racemase [Paracoccus denitrificans PD1222] gi|189030363|sp|A1B945|MURI_PARDP RecName: Full=Glutamate racemase gi|119377275|gb|ABL72039.1| glutamate racemase [Paracoccus denitrificans PD1222] Length = 270 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 52/227 (22%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH-------ALKKRLMFL 67 ++ +FDSG+GGL VL + MP+ +Y+ D+ PYG + A +RL Sbjct: 2 AVGVFDSGLGGLTVLSAIAARMPDLPLVYLGDNAHTPYGVRDADDIFDLTCAGVERLWAE 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 D++ ++ACNTA ++ T+ +P K+ + + Sbjct: 62 GCDLV--------ILACNTASAAALKRMQETW--------LPKDKRVLG------VFVPM 99 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACGIKIK 172 A R + N V+ H+ L ++ +ASR VE CG + Sbjct: 100 IEALTERRWGDNSPPREVAVKHVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVD 159 Query: 173 EDEIKKEIEG-----CFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211 E+ EI +E +R + +L CTHYPL+ F++ Sbjct: 160 AIEMGDEILAEALVTSHVEALLRRMPHPEAAILGCTHYPLVQAAFQK 206 >gi|89054829|ref|YP_510280.1| glutamate racemase [Jannaschia sp. CCS1] gi|122498526|sp|Q28PV7|MURI_JANSC RecName: Full=Glutamate racemase gi|88864378|gb|ABD55255.1| glutamate racemase [Jannaschia sp. CCS1] Length = 270 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 38/219 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ IY+ D+ PYG E + + D+ Sbjct: 2 AVGIFDSGLGGLTVLDAVTKALPDVPLIYMGDNAHTPYGVREADDIYDLTTAGVQHLFDR 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ + LG + +A Q G Sbjct: 62 GCD-LVILACNTASAAALRRMQEGWVPEGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171 +++ +TP T+ S+ ++ + VE CG + + Sbjct: 121 EVALFATPTTVS------------SRAFQRELAFRAIGVDVEAQPCGGVVDAIEDGDMIL 168 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 E ++ ++ +++ +L CTHYPL+ VFR Sbjct: 169 AEALVRSHVDA--LKRRMPNPQAAILGCTHYPLVEDVFR 205 >gi|332296003|ref|YP_004437926.1| glutamate racemase [Thermodesulfobium narugense DSM 14796] gi|332179106|gb|AEE14795.1| glutamate racemase [Thermodesulfobium narugense DSM 14796] Length = 277 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 15/203 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEY--HFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GG+ +L + YVAD + PYGN + L+ + + S L+ Sbjct: 3 IGIFDSGLGGVNILNSIINSNSPLIGDIFYVADTINVPYGNKDIEELELIVGNIIS-FLE 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 L + ACNT+ + + ++L+ + +G + P I + IL+T T+ Sbjct: 62 NKGCELIISACNTSSSTVLNKLKQK-TKIPIIGTIEPTINFVKETFHHKNLIILATKVTI 120 Query: 133 RRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 S + + +S C +++ V+ L +E ++I ED + + ++ I+ Sbjct: 121 E----SKIFENALSACDYNVYPVACPKLVDAIEFMNPSLEI-EDLLNRYLQ---IDINAS 172 Query: 191 RTDVIVLACTHYPLIVHVFRQLS 213 I+L CTHYPLI ++++ Sbjct: 173 EPIGILLGCTHYPLIKSQIKEVA 195 >gi|85711145|ref|ZP_01042205.1| glutamate racemase [Idiomarina baltica OS145] gi|85695058|gb|EAQ32996.1| glutamate racemase [Idiomarina baltica OS145] Length = 248 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 33/202 (16%) Query: 18 IFDSGIGGLIV---LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +FDSG+GGL V LQ+ R+ +Y D PYG+ +D R + + Sbjct: 5 VFDSGVGGLTVARSLQRSRYFS---ELLYFGDTARVPYGS-KDSNTVTRYALEAVEFFNG 60 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLG----AVPAIKQAAAYTQSGLISILSTPA 130 ++ACNT +++ E F + G V A++QA + +++T Sbjct: 61 TDVDALIVACNTV-SVVALETMQKFSNKPVYGVLEPGVMALEQATEVNHDSQVLVIAT-- 117 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG- 189 R T S + Q ++M + I E+E+ EG + Sbjct: 118 --RSTIQSGEYQRRIKQLGFEHATAMAT-------PLFVPIVEEEL---YEGAILHATFD 165 Query: 190 ------KRTDVIVLACTHYPLI 205 +R DV++L CTH+PLI Sbjct: 166 HYFSALERPDVVLLGCTHFPLI 187 >gi|126735639|ref|ZP_01751384.1| glutamate racemase, putative [Roseobacter sp. CCS2] gi|126714826|gb|EBA11692.1| glutamate racemase, putative [Roseobacter sp. CCS2] Length = 270 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 48/225 (21%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70 ++ IFDSG+GGL VL + +P+ +Y+ D PYG + K LF Sbjct: 2 AVGIFDSGLGGLTVLDAVAKRLPDVPLVYMGDSAHAPYGVRTPDDIYDLTTKSTQRLFDA 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121 D L ++ACNTA ++ + LG + +A Q G Sbjct: 62 GCD-----LVILACNTASAAALRRMQEAWVPDGKRVLGVFVPLIEALTERQWGDNSPPRE 116 Query: 122 ----LISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-------- 168 +++ +TPAT+ R + L + VE ACG Sbjct: 117 VDTKHVALFATPATVSSRAFQRELAFRAIG-------------VDVEAQACGGVVDAIEE 163 Query: 169 --IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 + + E + ++ ++++ D +L CTHYPL+ F++ Sbjct: 164 GDMILAEALVSSHVDA--LKRKMPEPDAAILGCTHYPLMAKEFQK 206 >gi|56459706|ref|YP_154987.1| glutamate racemase [Idiomarina loihiensis L2TR] gi|56178716|gb|AAV81438.1| Glutamate racemase [Idiomarina loihiensis L2TR] Length = 248 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 11/193 (5%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + ++ +Y D PYG+ +D R + + Sbjct: 5 VFDSGVGGLTVARSLQQSGCFSELLYYGDTARVPYGS-KDSNTVTRYALEAVEFFNGADV 63 Query: 78 VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNT ++++ S P L V A++Q S + +++T +T+ Sbjct: 64 DCLVVACNTVSVTALEQMQKFSNKPVYGVLEPGVMALEQLQGIDTSAQVLVIATRSTINS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I + + ++ +++ + VEE ++ + I +E + K ++ DV Sbjct: 124 GAYQQQIQA-LGYNQVNAMATPLFVPIVEE-----ELYDGPILQETFKHYFGKL-EKPDV 176 Query: 195 IVLACTHYPLIVH 207 ++L CTH+PLI Sbjct: 177 VLLGCTHFPLIAE 189 >gi|207093320|ref|ZP_03241107.1| glutamate racemase [Helicobacter pylori HPKX_438_AG0C1] Length = 156 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 7/140 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120 Query: 133 RRTYTSNLI--HSYVSQCHI 150 + N + Y++ H+ Sbjct: 121 QSNAYDNALKQQGYLNVSHL 140 >gi|83951823|ref|ZP_00960555.1| Glutamate racemase [Roseovarius nubinhibens ISM] gi|83836829|gb|EAP76126.1| Glutamate racemase [Roseovarius nubinhibens ISM] Length = 270 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 50/225 (22%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-HAL-KKRLMFLFSD 70 ++ IFDSG+GGL VL + +P+ +Y D+ PYG + +D H L ++ + +L+++ Sbjct: 2 AVGIFDSGLGGLTVLSAIEKRLPDLPLVYFGDNAHAPYGVRDADDIHNLTRQHVEYLWAN 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 D L ++ACNTA ++ VP K+ + + A Sbjct: 62 GCD-----LVILACNTASAAALRRMQEA--------GVPQGKRVLG------VFVPLIEA 102 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG------- 168 R + N V+ H+ L ++ ++SR VE +CG Sbjct: 103 LTERNWGDNSPPREVAVKHVALFATPATVSSRAFQRELAFRAIGVDVEAQSCGGVVDAIE 162 Query: 169 ---IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 + + E ++ ++ ++++ +L CTHYPL+ F+ Sbjct: 163 DGDMILAEALVRSHVDA--LKRKMPNPQAAILGCTHYPLMEAQFQ 205 >gi|325956149|ref|YP_004286759.1| glutamate racemase [Lactobacillus acidophilus 30SC] gi|325332714|gb|ADZ06622.1| glutamate racemase [Lactobacillus acidophilus 30SC] gi|327182953|gb|AEA31400.1| glutamate racemase [Lactobacillus amylovorus GRL 1118] Length = 268 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 47/214 (21%) Query: 36 MPEYHFIYVADDVGFPYGNW--ED--HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI 91 +P +++ D+ PYGN ED + ++ + FL ++ + L + ACNTA Sbjct: 26 LPNESTVFIGDNAHMPYGNRTKEDIINLTRRSVKFLLNNDVK-----LVIFACNTA---- 76 Query: 92 KDELRSTFPSMAFLGAVPA--IKQAAAYTQSGLISILSTPATLRRTYTSNLI----HSYV 145 + A +G + Q QSG ++ T + + + H+Y Sbjct: 77 ---------TAAAMGTIEKEIEPQIIGVIQSGALAASRTTKNKKVAVVATSVTVGSHAYE 127 Query: 146 SQCH-------IHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + H + +++ LA V EE+A +K+ ++ +GK D + Sbjct: 128 KEIHFRDPEIEVTELATPKLAPLVEAQEEHATNLKV--------VKESLAPLKGKDFDTL 179 Query: 196 VLACTHYPLIVHVFRQ-LSPWPVDWLDNSDSIAR 228 VL CTHYPLI F++ + V LD +D +A+ Sbjct: 180 VLGCTHYPLIEQEFKEAIDDENVTILDPADQVAQ 213 >gi|288921254|ref|ZP_06415538.1| glutamate racemase [Frankia sp. EUN1f] gi|288347344|gb|EFC81637.1| glutamate racemase [Frankia sp. EUN1f] Length = 277 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 18/199 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG V + + +P +++ + PYG ++ +LD Sbjct: 6 IGVFDSGVGGRTVARAIGDRLPARPLLHLGETANAPYGPQPGAEVRP----PAPAVLD-- 59 Query: 76 QPV-----LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 QPV L VIA N+A + R + VP +A A T+SG + ++ T A Sbjct: 60 QPVAAGVKLLVIAGNSAGAACLRDARERYDVPVVEVIVPTTCRAVAATRSGRVGVVGTVA 119 Query: 131 T-LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T R Y S S + V+ + V E GI E+ E + Sbjct: 120 TNASRAYEDAF--SAASGTELVSVACPAFGAFVVE---GITSGR-ELLGLTEAYRAPLQE 173 Query: 190 KRTDVIVLACTHYPLIVHV 208 D ++L CT YPL+ V Sbjct: 174 ADVDTVILGCTRYPLLTGV 192 >gi|161870616|ref|YP_001599789.1| glutamate racemase [Neisseria meningitidis 053442] gi|161596169|gb|ABX73829.1| glutamate racemase [Neisseria meningitidis 053442] gi|325198860|gb|ADY94316.1| glutamate racemase [Neisseria meningitidis G2136] Length = 239 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 6/167 (3%) Query: 40 HFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF 99 + IY D PYG ++ M + D L ++ VIACNT + ++R Sbjct: 3 NIIYFGDTARVPYGTKSKATIENFSMQIV-DFLLEHDVKAMVIACNTIAAVAGQKIRQKT 61 Query: 100 PSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMIL 158 +M L + A +AA A T++ I I++T T+ + IH + ++ +L Sbjct: 62 GNMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLL 121 Query: 159 ASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 VEE ++ + + ++ + D +VL CTH+PL+ Sbjct: 122 VPLVEEGWLEHEVTRLTVCEYLKPLLADG----IDTLVLGCTHFPLL 164 >gi|152991198|ref|YP_001356920.1| glutamate racemase [Nitratiruptor sp. SB155-2] gi|166231046|sp|A6Q504|MURI_NITSB RecName: Full=Glutamate racemase gi|151423059|dbj|BAF70563.1| glutamate racemase [Nitratiruptor sp. SB155-2] Length = 253 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 27/198 (13%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V++ + IY D PYG + + + R + + Sbjct: 5 VFDSGVGGLTVVKSLLEHGLFDEIIYFGDTARVPYGPKDKNTII-RYSLEAQEFFKNFDV 63 Query: 78 VLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + + ACN+ +ELRS +FP + + Q I ++ T AT+ Sbjct: 64 DILITACNSVSAHAIEELRSNASFPVIGVIEPGVLALQNRGLDPKSQILVIGTQATIGSG 123 Query: 136 YTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK------ 187 L+ H Y + ILA + + I E+EI EG +E Sbjct: 124 KYQKLLREHGY----------NNILAKATPLF---VPIVEEEI---FEGPVLEATLQHYF 167 Query: 188 EGKRTDVIVLACTHYPLI 205 + D I+L CTH+PLI Sbjct: 168 DSLHPDAIILGCTHFPLI 185 >gi|255532930|ref|YP_003093302.1| Asp/Glu/hydantoin racemase [Pedobacter heparinus DSM 2366] gi|255345914|gb|ACU05240.1| Asp/Glu/hydantoin racemase [Pedobacter heparinus DSM 2366] Length = 508 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 79/199 (39%), Gaps = 50/199 (25%) Query: 16 ILIFDSGIGGLIVLQKM----------RFL----MPEY---HFIYVADDVGFPYGNWEDH 58 I +FDSG GGL +L + +F +P++ FIY+AD PYGN+ Sbjct: 60 IGVFDSGTGGLTILNTLVQFDQHNNATKFAGKDNIPDFAKEKFIYLADQANMPYGNYYSE 119 Query: 59 A--------LKKRLMFLFSDIL-----------DKYQPVLSVIACNTAFT----LIKDEL 95 + K FL SD DK + VIACNTA I+D + Sbjct: 120 KKNDLLVEHIIKDAQFLLSDKYYLNNTTKNYSSDKQKVKAIVIACNTATAYGKEYIEDFI 179 Query: 96 RSTFPSMAFLGAVPAIKQAA----AYTQSGLISILSTPATLRRTYTSNLIHS------YV 145 ++T ++ +G + A Q ++G I + +T T+ N I + Y Sbjct: 180 KTTGINLKVIGVIDAGAQGTLDVFKKDENGSIGVFATVGTIASKGYENTILALKDKLGYK 239 Query: 146 SQCHIHLVSSMILASRVEE 164 ++ LA V+E Sbjct: 240 GNLQVYNQGGYGLAEAVDE 258 >gi|87303353|ref|ZP_01086141.1| Glutamate racemase [Synechococcus sp. WH 5701] gi|87282001|gb|EAQ73963.1| Glutamate racemase [Synechococcus sp. WH 5701] Length = 276 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 15/179 (8%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT- 86 VL++M P+ F+Y+ D PYG+ + + +R+ L + Q ++ACNT Sbjct: 17 VLRRMLEHHPDLPFVYLGDTARVPYGHRSPNEI-RRIAAEVVGWLREQQVDAVLMACNTT 75 Query: 87 ---AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS 143 AF + + E P + V A+ Q + +L+TPAT + Sbjct: 76 NALAFDIAEAEAGEGVPVFGLIDCV------ASQLQCQRVGVLATPATASSGAYGRALRQ 129 Query: 144 YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 CH+ + +E+ + ++ +R + IVL CTHY Sbjct: 130 ADPSCHVIEIGCPAFVPLIEDG----NFADPRLRAAAIAYLEPLLAERVEAIVLGCTHY 184 >gi|194477143|ref|YP_002049322.1| Glutamate racemase [Paulinella chromatophora] gi|171192150|gb|ACB43112.1| Glutamate racemase [Paulinella chromatophora] Length = 272 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 45/244 (18%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL ++ P + +IY+ D PYG ++ S + ++ Sbjct: 8 LFDSGVGGLTVLHQVLKRHPNHSYIYLGDTARVPYGERNPREIRSIAGEAISWLRNQQVD 67 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAF-LGAVPA---IKQAAAYTQSGLISILSTPATLR 133 L ++ACNT L D +A + VP I AA ++ + +LST AT Sbjct: 68 AL-IMACNTTNALAYD--------IALKISGVPVYGLIDSAARCIRAKRVGVLSTAATAA 118 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE----- 188 + IH Y SQ ++V E AC + EI G F + Sbjct: 119 SRAYTLQIHRYSSQ------------TQVIEQACPAFVPLIEI-----GNFQDPRLRIAA 161 Query: 189 --------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRIN 238 ++I+L CTHYPL+ + RQL P + LD + ++++R LL P+ Sbjct: 162 NLYLAPLLAANVEIIMLGCTHYPLLEPLLRQLLPSHIQLLDPARALSKRLDQLLGIPKRT 221 Query: 239 THQT 242 H + Sbjct: 222 VHNS 225 >gi|254475982|ref|ZP_05089368.1| glutamate racemase [Ruegeria sp. R11] gi|214030225|gb|EEB71060.1| glutamate racemase [Ruegeria sp. R11] Length = 269 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 28/214 (13%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + ED + ++ Sbjct: 2 AVGIFDSGLGGLTVLDAAQRRLPDVDFLYYGDNARAPYGVRDAEDVFQLTNNAVNAMWER 61 Query: 71 ILDKYQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGA-VPAIKQAAAY---------- 117 D L ++ACNT A L + + LG VP I+ Sbjct: 62 GCD-----LVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTEREWGDNSPPRE 116 Query: 118 TQSGLISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 ++ +++ +TPAT+ R + L + + S L +E+ G I D + Sbjct: 117 VETKHVALFATPATVASRAFQRELAFRAIG-VDVEAQSCGGLVDAIED---GDMILADAL 172 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 K + K +L CTHYPL+ F+ Sbjct: 173 VKSHVDALLRKM-PNPQAAILGCTHYPLMEDAFQ 205 >gi|154507589|ref|ZP_02043231.1| hypothetical protein ACTODO_00069 [Actinomyces odontolyticus ATCC 17982] gi|153797223|gb|EDN79643.1| hypothetical protein ACTODO_00069 [Actinomyces odontolyticus ATCC 17982] Length = 276 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 10/216 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ IY+ D PYG ++ + ++ + Sbjct: 6 IGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGPRAIAQVRSLTLSALDELASRG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 L VIACNTA + R + A + V PA +Q+ T++ + ++ T AT Sbjct: 66 VKAL-VIACNTATAAALADARERYWIDAGIPVVEVITPAARQSVIATRNHHVGVIGTKAT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ S ++ VS + V+ G+ E EI+ + Sbjct: 125 IQ----SEAYLRALAAVPGLTVSQQACPAFVDFVEAGVTTGE-EIEAVAREYLTPLKEAG 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D ++L CTHYPL+ V ++ V + +S++ A Sbjct: 180 VDTLILGCTHYPLLTGVIGRIMGERVTLVTSSEATA 215 >gi|293189259|ref|ZP_06607982.1| glutamate racemase [Actinomyces odontolyticus F0309] gi|292821722|gb|EFF80658.1| glutamate racemase [Actinomyces odontolyticus F0309] Length = 276 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 10/216 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P+ IY+ D PYG ++ + ++ + Sbjct: 6 IGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGPRAIAQVRSLTLSALDELASRG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131 L VIACNTA + R + A + V PA +Q+ T++ + ++ T AT Sbjct: 66 VKAL-VIACNTATAAALADARERYWIDAGIPVVEVITPAARQSVIATRNHHVGVIGTKAT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ S ++ VS + V+ G+ E EI+ + Sbjct: 125 IQ----SEAYLRALAAVPGLTVSQQACPAFVDFVEAGVTTGE-EIEAVAREYLTPLKEAG 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D ++L CTHYPL+ V ++ V + +S++ A Sbjct: 180 VDTLILGCTHYPLLTGVIGRIMGERVTLVTSSEATA 215 >gi|126726358|ref|ZP_01742199.1| glutamate racemase [Rhodobacterales bacterium HTCC2150] gi|126704221|gb|EBA03313.1| glutamate racemase [Rhodobacterales bacterium HTCC2150] Length = 270 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 38/219 (17%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL M+ +P+ F+Y D + PYG + + L + L + Sbjct: 2 AVGVFDSGLGGLTVLAAMQERLPDQAFVYYGDQINSPYGVRTPDDIYQ-LTAAATHSLWE 60 Query: 75 YQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNT A L + + LG + +A Q G Sbjct: 61 QGCDLVILACNTASAAALRRMQEEGVPKGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE------ 175 +++ +TP+T+ S+ ++ + VE CG + E Sbjct: 121 NVALFATPSTV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAIEDGDMML 168 Query: 176 ----IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210 ++ +E +++ +L CTHYPL+ F+ Sbjct: 169 ADALVRSHVEA--LKRRMPNPHAAILGCTHYPLMQSEFQ 205 >gi|17902530|emb|CAC81005.1| glutamate racemase [Pseudanabaena sp. PCC 6903] Length = 115 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 7/94 (7%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +++ + I +FDSG+GGL VLQ++ +P +Y D PYG ++ Sbjct: 6 QQEARFPIGVFDSGVGGLTVLQEVHRQLPNESVVYFGDTARLPYGKRS----PAEIIEYV 61 Query: 69 SDILDKYQPV---LSVIACNTAFTLIKDELRSTF 99 +IL Q + ++++ACNT+ L D +R F Sbjct: 62 YEILHWMQSLEVKMAIMACNTSSALALDVVRPEF 95 >gi|282852140|ref|ZP_06261497.1| glutamate racemase [Lactobacillus gasseri 224-1] gi|282556704|gb|EFB62309.1| glutamate racemase [Lactobacillus gasseri 224-1] Length = 241 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 35/231 (15%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD----ILDKYQPVLSVIACNTAFTLI 91 MP I++ D PYG+ K+ ++ L D +L K ++ + CNTA + Sbjct: 1 MPNESTIFIGDQANMPYGDRS----KEEIISLTRDSVNFLLSKDVKII-IFGCNTATAVA 55 Query: 92 KDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHI 150 ++ P + +G V + AAA T++ ++++ T AT+ HSY+ + I Sbjct: 56 MSTIKKEIP-LQIIGVVQSGALAAARTTETKNVAVIGTKATVNS-------HSYLKE--I 105 Query: 151 HLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIV 206 I S + +ED EIK+ + + K D +VL CTHYPL+ Sbjct: 106 QYRDPKIQVSEFAQPKLAPLAEEDPAEEIKQAVVSESLAPLKKADYDTLVLGCTHYPLLR 165 Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 + +D +D +A+ +L R LF +G D Sbjct: 166 KEIVAVVGQDRKIVDPADQVAQYTYNVLRR-----------DGLFAAGNSD 205 >gi|224437846|ref|ZP_03658793.1| glutamate racemase [Helicobacter cinaedi CCUG 18818] gi|313144294|ref|ZP_07806487.1| glutamate racemase [Helicobacter cinaedi CCUG 18818] gi|313129325|gb|EFR46942.1| glutamate racemase [Helicobacter cinaedi CCUG 18818] Length = 246 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 28/231 (12%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-DILDKYQ 76 +FDSGIGGL VL+ + IY D PYG K+ + FS + LD ++ Sbjct: 5 VFDSGIGGLSVLKSLINAKLFDEIIYYGDTARVPYG-----VKDKQTIIRFSLEALDFFK 59 Query: 77 P---VLSVIACNT--AFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPA 130 P + ++ACNT A+ L + + S P + + V A++ T S ++ IL+T A Sbjct: 60 PHNIDILIVACNTVSAYALEEMQKHSKIPIVGVIEPGVLAVQNKLKDTDSEIL-ILATRA 118 Query: 131 TLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ Y + L + ++ +++ + VEE + E + + + + Sbjct: 119 TINSGEYETRL--RKIGFWNLKSLATGLFVPLVEE-----GLLEGAVLESVFDYYFSNFT 171 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 I+L CTH+PLI + +N + ++ + TH Sbjct: 172 NPPKGIILGCTHFPLIADALSA-------YFNNQSVLIHSGEAIVEYLETH 215 >gi|298254110|ref|ZP_06977696.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19A] Length = 88 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 9/95 (9%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS 97 L + +L K ++ VIACNTA ++ +E+++ Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKA 86 >gi|229821218|ref|YP_002882744.1| glutamate racemase [Beutenbergia cavernae DSM 12333] gi|259509810|sp|C5BY82|MURI_BEUC1 RecName: Full=Glutamate racemase gi|229567131|gb|ACQ80982.1| glutamate racemase [Beutenbergia cavernae DSM 12333] Length = 292 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 19/198 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +YV D PYG +++ + + ++ Sbjct: 6 IGIFDSGVGGLTVARAVLDQLPHESVLYVGDTARTPYGPRPIAQVREYSLEILDSLVASG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK-------QAAAYTQSGLISILST 128 L VIACN+A + + R + VP ++ +AAA T++G I ++ T Sbjct: 66 VKAL-VIACNSASAAMLADARERYEG----DGVPVVEVIRPAVRRAAAATRNGRIGVIGT 120 Query: 129 PATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 AT+ R Y + Q +H + VE+ + + Sbjct: 121 RATISSRAYEDAF--AAAPQLQLHTRACPDFVELVEDG----ETSGPAVLASAHAYLDPL 174 Query: 188 EGKRTDVIVLACTHYPLI 205 D +VL CTHYPL+ Sbjct: 175 RDAGVDTLVLGCTHYPLL 192 >gi|163838785|ref|YP_001623190.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209] gi|162952261|gb|ABY21776.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209] Length = 271 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 28/229 (12%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FD+G+G +++ +R P IY AD FPYG K LF L Sbjct: 11 IAVFDAGLGSYDIVRALRNHFPAVDLIYFADRASFPYG-------AKSASELFEVALRSC 63 Query: 76 QPVLS------VIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 Q + S +I N + D + + FP LG +P I+ A + + + +L+ Sbjct: 64 QYLNSLGASCVIIGSNAPSVTVLDAVAAQCAFP---VLGVLPPIQVALSSIEPTEVLLLA 120 Query: 128 TPATLRRTYT-SNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 A++ ++ + I+ Q + ++ L VE G + + + F Sbjct: 121 GAASMTQSQQLQDFINREAGQQAWRVQTAAATKLIDLVE---SGQFVADPSGTVALVAEF 177 Query: 185 IE---KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 ++ +EG+ + L+ TH P + F++ +P + + +DS+A A Sbjct: 178 LDQQRREGQTIGGVTLSSTHLPWLSFAFKEAAP-NLQLFNPADSVALTA 225 >gi|25808693|gb|AAN74473.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKYSKIPIVGVIGPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +VI+L CTH+PLI H Sbjct: 124 RYYFTPLKILPEVIILGCTHFPLIAH 149 >gi|25808745|gb|AAN74499.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ + N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLKILPEVVILGCTHFPLIAH 149 >gi|34557207|ref|NP_907022.1| glutamate racemase [Wolinella succinogenes DSM 1740] gi|34482923|emb|CAE09922.1| GLUTAMATE RACEMASE [Wolinella succinogenes] Length = 248 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 15/193 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSGIGGL V++ + IY D PYG + + + + + L ++ Sbjct: 5 VFDSGIGGLSVVKSLLDSHAFEEIIYFGDTARVPYGVKDSETIIRYSLEALA-FLREFDI 63 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLG----AVPAIKQAAAYTQSGLISILSTPATLR 133 + ++ACNTA + LR + +G V A++ S ++ I + T Sbjct: 64 DMLIVACNTASAHALEALRQA-ADVDVIGVIEPGVLALENRLPDKNSPILVIGTKATTAS 122 Query: 134 RTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y + L H Y HI +++ +L VEE + E ++ + + Sbjct: 123 GQYPALLKEHGY---THIQSLATGLLVPLVEEGIFHGSLLESALEH-----YFSSLAVKP 174 Query: 193 DVIVLACTHYPLI 205 I+L CTH+PLI Sbjct: 175 KAIILGCTHFPLI 187 >gi|91200741|emb|CAJ73793.1| hypothetical protein kuste3038 [Candidatus Kuenenia stuttgartiensis] Length = 916 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 63/266 (23%) Query: 1 MKIDNYPCEKKLQNS----ILIFDSGIGGLIVLQKMRFLMP--EYHFIYVADDVGFPYGN 54 M+ N P +KK+++ I IFDSG GG+IV +K+ ++P + D FP+G Sbjct: 542 MEAKNAP-QKKMKDKKPLIIGIFDSGQGGIIVTEKLNRILPVGNIKLLLFTDKANFPFGQ 600 Query: 55 WED-----------HALKKR-----------------------LMFLFSDILDKYQPVLS 80 H + +R +F++ I+ + V+ Sbjct: 601 KSKEEINDITFRAVHEINERCKTMHQSNGFFYRFIYNTPYFLKTVFIWLGIIPR--DVIV 658 Query: 81 VIACNTAFTLIK-DELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPATLRRTYTS 138 ACNT T++ +LR FP + F+G V + + A + I I+ T T++ S Sbjct: 659 CFACNTVDTMVNHKKLRIRFPHIQFIGPVKKTLLKINALPKDARIGIIGTVGTIK----S 714 Query: 139 NLIHSYVSQCHIHLVSS-----MILASRVEEYACGIKIKEDEIKKEIEGC-------FIE 186 + + + H+++ +L+ + + + + K+ E K FI+ Sbjct: 715 GIYEKRIREAGYHVLAKPTPLLAVLSEMLYKKSFDTEEKQKEFYKTARDLIYVNLKEFIK 774 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQL 212 K + LACTHY + + L Sbjct: 775 K--NTISHLCLACTHYDYLKSTLKDL 798 >gi|261881993|gb|ACY04880.1| glutamate racemase [Helicobacter pylori] gi|261881995|gb|ACY04881.1| glutamate racemase [Helicobacter pylori] gi|261882007|gb|ACY04887.1| glutamate racemase [Helicobacter pylori] gi|261882009|gb|ACY04888.1| glutamate racemase [Helicobacter pylori] gi|261882011|gb|ACY04889.1| glutamate racemase [Helicobacter pylori] gi|261882013|gb|ACY04890.1| glutamate racemase [Helicobacter pylori] gi|261882015|gb|ACY04891.1| glutamate racemase [Helicobacter pylori] gi|261882019|gb|ACY04893.1| glutamate racemase [Helicobacter pylori] gi|261882021|gb|ACY04894.1| glutamate racemase [Helicobacter pylori] gi|261882023|gb|ACY04895.1| glutamate racemase [Helicobacter pylori] gi|261882025|gb|ACY04896.1| glutamate racemase [Helicobacter pylori] gi|261882027|gb|ACY04897.1| glutamate racemase [Helicobacter pylori] gi|261882029|gb|ACY04898.1| glutamate racemase [Helicobacter pylori] gi|261882031|gb|ACY04899.1| glutamate racemase [Helicobacter pylori] gi|261882033|gb|ACY04900.1| glutamate racemase [Helicobacter pylori] gi|261882035|gb|ACY04901.1| glutamate racemase [Helicobacter pylori] gi|261882037|gb|ACY04902.1| glutamate racemase [Helicobacter pylori] gi|261882039|gb|ACY04903.1| glutamate racemase [Helicobacter pylori] gi|261882041|gb|ACY04904.1| glutamate racemase [Helicobacter pylori] gi|261882043|gb|ACY04905.1| glutamate racemase [Helicobacter pylori] gi|261882045|gb|ACY04906.1| glutamate racemase [Helicobacter pylori] gi|261882047|gb|ACY04907.1| glutamate racemase [Helicobacter pylori] gi|261882049|gb|ACY04908.1| glutamate racemase [Helicobacter pylori] gi|261882051|gb|ACY04909.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPI 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150 >gi|25808687|gb|AAN74470.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + +G ++ AIKQ + ++ Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKDKNASIL 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 -VLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149 >gi|25808753|gb|AAN74503.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIGLLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149 >gi|261882017|gb|ACY04892.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLGA-VPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + +G+ + AIKQ ++ I Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGSSILAIKQQVK-DKNAPI 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150 >gi|254485925|ref|ZP_05099130.1| putative glutamate racemase [Roseobacter sp. GAI101] gi|214042794|gb|EEB83432.1| putative glutamate racemase [Roseobacter sp. GAI101] Length = 189 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL V ++ +P+ F+Y+AD PYG + + + D Sbjct: 2 AVGIFDSGLGGLTVWNAVQAQLPDVEFVYLADSAHAPYGVRTSDDIYNLTVAATQRLFDA 61 Query: 75 YQPVLSVIACNTA 87 L ++ACNTA Sbjct: 62 GCD-LVILACNTA 73 >gi|326385030|ref|ZP_08206702.1| glutamate racemase [Gordonia neofelifaecis NRRL B-59395] gi|326196244|gb|EGD53446.1| glutamate racemase [Gordonia neofelifaecis NRRL B-59395] Length = 220 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 21/196 (10%) Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL-RRTYTS 138 VIACNTA + R + + + + PA+++A T++G I ++ T AT+ R Y Sbjct: 26 VIACNTASAACLRDARERYAPIPVIEVILPAVRRAVVATKTGRIGVIGTEATIASRAYQD 85 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 + + I V VE GI +I EG + D +VL Sbjct: 86 SF--AAARDVEITAVPCPRFVDFVER---GIT-SGRQILGLAEGYLEPLQEADVDTLVLG 139 Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIAR-------RARCLLPRINTHQTRVFDDHALF 251 CTHYPL+ V + + V + +++ A+ + L P N R F Sbjct: 140 CTHYPLLSGVVQLVMGDEVTLVSSAEETAKDTFRVLTESDTLHPHTNRQARRQFS----- 194 Query: 252 LSGKPDIAMRRLMQGF 267 +G P+ + R+L F Sbjct: 195 ATGDPE-SFRKLSTRF 209 >gi|284052422|ref|ZP_06382632.1| glutamate racemase [Arthrospira platensis str. Paraca] Length = 214 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 16/148 (10%) Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 ++ACNT+ L + +RS F + LG + P + AA +Q I +++TPAT Sbjct: 3 LMACNTSSALALEVVRSEF-DIPILGLILPGAR--AAISQGERIGVIATPATAASNAYRQ 59 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEY----ACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 I + V +E+ C ++ + + I+ +R D + Sbjct: 60 AIQEINPAVQVWQVGCPAFVPLIEQNRIHDPCTLEAAREYLTPLIQ--------QRIDTL 111 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNS 223 + CTHYP + V R L P V +D + Sbjct: 112 IYGCTHYPHLAPVLRSLLPAAVKLVDPA 139 >gi|47093489|ref|ZP_00231251.1| glutamate racemase [Listeria monocytogenes str. 4b H7858] gi|47018107|gb|EAL08878.1| glutamate racemase [Listeria monocytogenes str. 4b H7858] Length = 211 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 25/204 (12%) Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 VIACNTA ++R + +G + P + A T++ I +L T T+ Sbjct: 14 VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYPT 72 Query: 140 LIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + + ++ S VE EY I KK + + + + D ++L Sbjct: 73 ALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLKSTKIDTVIL 126 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------------THQT 242 CTHYPL+ + V +++ + A LL N T T Sbjct: 127 GCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRFFTTGST 186 Query: 243 RVFDDHALFLSGKPDIAMRRLMQG 266 ++F D A PD+ + + G Sbjct: 187 QIFKDIAKDWLNMPDMTVEHIKLG 210 >gi|25808677|gb|AAN74465.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT+R N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLKILPEVVILGCTHFPLIAH 149 >gi|30959112|gb|AAO73315.1| glutamate racemase [Helicobacter pylori] Length = 184 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI H Sbjct: 127 FTPLKILPEVIILGCTHFPLIAH 149 >gi|261881937|gb|ACY04852.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILESELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150 >gi|261881929|gb|ACY04848.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI H Sbjct: 128 FTPLKILPEVIILGCTHFPLIAH 150 >gi|25808737|gb|AAN74495.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILESELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|261881961|gb|ACY04864.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA TL +E++ S P + + ++ AIKQ ++ I Sbjct: 14 EALDFFKPHKIELLIVACNTASTLALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150 >gi|261881953|gb|ACY04860.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI H Sbjct: 128 FTPLKILPEVIILGCTHFPLIAH 150 >gi|25808727|gb|AAN74490.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI H Sbjct: 127 FTPLKILPEVIILGCTHFPLIAH 149 >gi|25808691|gb|AAN74472.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + S +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVSLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149 >gi|207110490|ref|ZP_03244652.1| glutamate racemase [Helicobacter pylori HPKX_438_CA4C1] Length = 87 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG +D K+ D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELR 96 Q L ++ACNTA L +E++ Sbjct: 62 QIELLIVACNTASALALEEMQ 82 >gi|25808673|gb|AAN74463.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808639|gb|AAN74446.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ ++ +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKKAPIL-VL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808667|gb|AAN74460.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ ST P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSTIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|255030221|ref|ZP_05302172.1| glutamate racemase [Listeria monocytogenes LO28] Length = 96 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTA 87 +D+ +L VIACNTA Sbjct: 61 VDRGIKML-VIACNTA 75 >gi|25808669|gb|AAN74461.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ ST P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSTIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808683|gb|AAN74468.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALGEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT+R N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149 >gi|25808759|gb|AAN74506.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 16/142 (11%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISI 125 D +Q L V+ACNTA L +E++ F + +G + AIKQ ++ I + Sbjct: 16 DFFKPHQIKLLVVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILV 73 Query: 126 LSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 74 LGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRY 125 Query: 184 FIEKEGKRTDVIVLACTHYPLI 205 + +VI+L CTH+PLI Sbjct: 126 YFTPLKILPEVIILGCTHFPLI 147 >gi|25808715|gb|AAN74484.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT+R N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149 >gi|261881951|gb|ACY04859.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 16/142 (11%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISI 125 D +Q L V+ACNTA L +E++ F + +G + AIKQ ++ I + Sbjct: 17 DFFKPHQIKLLVVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILV 74 Query: 126 LSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 75 LGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRY 126 Query: 184 FIEKEGKRTDVIVLACTHYPLI 205 + +VI+L CTH+PLI Sbjct: 127 YFTPLKILPEVIILGCTHFPLI 148 >gi|46404909|gb|AAS93325.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 23/155 (14%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE------IKKEIEGCFIEKEGKRTD 193 S + + I L++ + +V AC + I E KK + G GK D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYGSLAPLVGK-ID 106 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 107 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|284051284|ref|ZP_06381494.1| glutamate racemase [Arthrospira platensis str. Paraca] Length = 76 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 25/43 (58%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 K I IFDSG+GGL VL+++ +P +Y AD PYG Sbjct: 5 KRGQKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYG 47 >gi|25808649|gb|AAN74451.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + SY++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQSYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|261882003|gb|ACY04885.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNAPI 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 125 RYYFTPLKILPEVVILGCTHFPLIAH 150 >gi|25808689|gb|AAN74471.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIGLLIVACNTASALALGEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 127 FTPLEILPEVVILGCTHFPLIAH 149 >gi|261881957|gb|ACY04862.1| glutamate racemase [Helicobacter pylori] gi|261881959|gb|ACY04863.1| glutamate racemase [Helicobacter pylori] gi|261881963|gb|ACY04865.1| glutamate racemase [Helicobacter pylori] gi|261881965|gb|ACY04866.1| glutamate racemase [Helicobacter pylori] gi|261881967|gb|ACY04867.1| glutamate racemase [Helicobacter pylori] gi|261881969|gb|ACY04868.1| glutamate racemase [Helicobacter pylori] gi|261881971|gb|ACY04869.1| glutamate racemase [Helicobacter pylori] gi|261881973|gb|ACY04870.1| glutamate racemase [Helicobacter pylori] gi|261881977|gb|ACY04872.1| glutamate racemase [Helicobacter pylori] gi|261881979|gb|ACY04873.1| glutamate racemase [Helicobacter pylori] gi|261881983|gb|ACY04875.1| glutamate racemase [Helicobacter pylori] gi|261882005|gb|ACY04886.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150 >gi|261881989|gb|ACY04878.1| glutamate racemase [Helicobacter pylori] gi|261881991|gb|ACY04879.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ + ++ Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL 73 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 74 -VLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150 >gi|12055941|emb|CAC21088.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++T + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKATL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|25808713|gb|AAN74483.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149 >gi|25808699|gb|AAN74476.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149 >gi|25808711|gb|AAN74482.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ + ++ Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 -VLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149 >gi|25808703|gb|AAN74478.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQDYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLKILPEVVILGCTHFPLIAH 149 >gi|25808707|gb|AAN74480.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149 >gi|25808695|gb|AAN74474.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQDYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLKILPEVVILGCTHFPLIAH 149 >gi|198385963|gb|ACH86244.1| glutamate racemase [Streptococcus canis] gi|198385965|gb|ACH86245.1| glutamate racemase [Streptococcus canis] gi|209486169|gb|ACI48540.1| glutamate racemase [Streptococcus canis] Length = 146 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 7/147 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTITSDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ A VE +I KK + GK D +VL CTH Sbjct: 60 QLLAPSVTVTSLACPKFAPIVESN----EIHSSVAKKVVYKSLAPLVGK-VDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228 YPL+ + + + V +D+ R Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|198250339|gb|ACH85186.1| glutamate racemase [Streptococcus canis] Length = 146 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 7/147 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTITSDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ A VE +I KK + GK D +VL CTH Sbjct: 60 QLLAPSVTVTSLACPKFAPIVESN----EIHSSVAKKVVYKSLAPLVGK-VDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228 YPL+ + + + V +D+ R Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|25808761|gb|AAN74507.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFPHLKILPEVVILGCTHFPLIAH 149 >gi|261881975|gb|ACY04871.1| glutamate racemase [Helicobacter pylori] gi|261881981|gb|ACY04874.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 17/144 (11%) Query: 72 LDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISI 125 LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I + Sbjct: 16 LDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILV 74 Query: 126 LSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 75 LGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRY 126 Query: 184 FIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 127 YFTPLEILPEVVILGCTHFPLIAH 150 >gi|261881985|gb|ACY04876.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I Sbjct: 14 EALDFFKPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +VI+L CTH+PLI H Sbjct: 125 RYYFTPLEILPEVIILGCTHFPLIAH 150 >gi|213579831|ref|ZP_03361657.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 134 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 144 YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP 203 + ++C I ++ S L E G + +E+++ + E D +VL CTH+P Sbjct: 2 FANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFP 59 Query: 204 LIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 L+ Q+ P +D+ +IARR LL Sbjct: 60 LLRDELLQVLPEGTRLVDSGAAIARRTAWLL 90 >gi|284029805|ref|YP_003379736.1| glutamate racemase [Kribbella flavida DSM 17836] gi|283809098|gb|ADB30937.1| glutamate racemase [Kribbella flavida DSM 17836] Length = 290 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 10/196 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GGL V + + +P +Y+ D PYG +++ + +++ Sbjct: 29 IGIFDSGFGGLTVARAVLDQLPHEPILYLGDTARQPYGPKSIAEVREYALECLDHLVEAG 88 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACN+A + + R + +PA ++A A T++ + ++ T R+ Sbjct: 89 VKAL-VIACNSASAAMLRDARERYDVPVVEVILPAARRAVAATRNQRVGVICT-----RS 142 Query: 136 YTSNLIH--SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 ++L + ++ + + L ++ V+ G+ + + E E D Sbjct: 143 TAASLAYDDAFAAAPQVEL-TTQACPKFVDFVESGVTSGPELLAAAHEYLDPLVEAG-VD 200 Query: 194 VIVLACTHYPLIVHVF 209 ++L CTHYPL+ V Sbjct: 201 TLILGCTHYPLLTGVI 216 >gi|25808763|gb|AAN74508.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIK+ A ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVA-NKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808679|gb|AAN74466.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFAPLEILPEVVILGCTHFPLIAH 149 >gi|205355664|ref|ZP_03222434.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346441|gb|EDZ33074.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8421] Length = 186 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 14/141 (9%) Query: 81 VIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-RTYT 137 +IACNTA D LR+ FP + A A + ++ I +++T AT++ Y Sbjct: 3 IIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQ 62 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L+ +I+ +++ + VEE GI + D ++ +E F K D ++L Sbjct: 63 KRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTPDALIL 114 Query: 198 ACTHYPLIVHVFRQLSPWPVD 218 ACTH+PL+ R LS + D Sbjct: 115 ACTHFPLLG---RSLSKYFGD 132 >gi|261882001|gb|ACY04884.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISIL 126 D ++ L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 17 DFFKSHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 128 FTPLEILPEVVILGCTHFPLIAH 150 >gi|25808747|gb|AAN74500.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + VI+L CTH+PLI H Sbjct: 124 RYYFAPLKILPKVIILGCTHFPLIAH 149 >gi|25808659|gb|AAN74456.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|261881919|gb|ACY04843.1| glutamate racemase [Helicobacter pylori] gi|261881933|gb|ACY04850.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150 >gi|332755092|gb|EGJ85457.1| asp/Glu/Hydantoin racemase family protein [Shigella flexneri 4343-70] Length = 230 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 17/172 (9%) Query: 51 PYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSM 102 PYGN + KK L FL S + L +ACNT + ++ E S +FP Sbjct: 4 PYGNRSADDIISLTKKMLTFLQSRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-F 57 Query: 103 AFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV 162 L + + Q + I++T T++ LI S ++ S LA + Sbjct: 58 PILSIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLI 117 Query: 163 EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 EE ++IKK + + I+L CTHYP++ + F ++P Sbjct: 118 EEGNLNAPAILNDIKKHVNHLI---SLHPVNEIILGCTHYPIVQNFFEAVAP 166 >gi|25808657|gb|AAN74455.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE G ++ E ++ Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLK 131 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 I E VI+L CTH+PLI Sbjct: 132 ILPE-----VIILGCTHFPLIAQ 149 >gi|25808729|gb|AAN74491.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|46404905|gb|AAS93323.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAATKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ I +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|25808675|gb|AAN74464.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808681|gb|AAN74467.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLKILPEVVILGCTHFPLIAH 149 >gi|25808655|gb|AAN74454.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASIL-VL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808717|gb|AAN74485.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D + +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 16 DFFNPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASIL-VL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 127 FTPLEILPEVVILGCTHFPLIAQ 149 >gi|261881911|gb|ACY04839.1| glutamate racemase [Helicobacter pylori] gi|261881913|gb|ACY04840.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150 >gi|25808645|gb|AAN74449.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQDYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808635|gb|AAN74444.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L V+ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQLK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808749|gb|AAN74501.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 127 FTPLKILPEVVILGCTHFPLIAQ 149 >gi|261881987|gb|ACY04877.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPI 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + V++L CTH+PLI H Sbjct: 125 RYYFTPLEILPKVVILGCTHFPLIAH 150 >gi|46404935|gb|AAS93338.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + ++ V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVTGPSVKLIDSGAECVR 141 >gi|25808731|gb|AAN74492.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 16 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASIL-VL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149 >gi|25808771|gb|AAN74512.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808641|gb|AAN74447.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808709|gb|AAN74481.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + V++L CTH+PLI H Sbjct: 124 RYYFTPLEILPKVVILGCTHFPLIAH 149 >gi|261881997|gb|ACY04882.1| glutamate racemase [Helicobacter pylori] gi|261881999|gb|ACY04883.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D ++ L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 17 DFFKSHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNTPIL-VL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI H Sbjct: 128 FTPLEILPEVVILGCTHFPLIAH 150 >gi|25808685|gb|AAN74469.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808663|gb|AAN74458.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|261881943|gb|ACY04855.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150 >gi|25808697|gb|AAN74475.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149 >gi|25808627|gb|AAN74440.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808661|gb|AAN74457.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIK+ A ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVA-NKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNGSHL---ATSLFVPLIEE-----SILEGELVETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 VI+L CTH+PLI Sbjct: 127 FTPFKILPGVIILGCTHFPLIAQ 149 >gi|25808665|gb|AAN74459.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|33521553|gb|AAQ20064.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 23/155 (14%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE------IKKEIEGCFIEKEGKRTD 193 S + + I L++ + +V AC + I E KK + + GK D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLVPLVGK-ID 106 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 107 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|25808629|gb|AAN74441.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|33521545|gb|AAQ20060.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKLTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ I +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|261881931|gb|ACY04849.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 128 FTPLEILPEVIILGCTHFPLIAQ 150 >gi|25808769|gb|AAN74511.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 14/141 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLI 205 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLI 147 >gi|238761263|ref|ZP_04622240.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638] gi|238761516|ref|ZP_04622492.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638] gi|238700490|gb|EEP93231.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638] gi|238700743|gb|EEP93483.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638] Length = 182 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 8/135 (5%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILA 159 S+ +G +P +K A +++ I+IL + + +I + + +C ++ V++ L Sbjct: 9 SLPVIGILPPVKDACLNSKTKKIAILGVRSMVESPELKRYIIENTIEECDVYGVNASELV 68 Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGK---RTDVIVLACTHYPLIVHVFRQLSPWP 216 + VE+++ + E ++ F+EK + DVI L+ TH P + F P Sbjct: 69 NLVEDFSFR---NDKEKTQQSVSLFLEKLLEIYPNIDVITLSSTHLPWLKEFFLNAQPHI 125 Query: 217 VDWLDNSDSIARRAR 231 + +LD SD + R Sbjct: 126 I-FLDPSDKVIEGIR 139 >gi|25808643|gb|AAN74448.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808633|gb|AAN74443.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808765|gb|AAN74509.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149 >gi|261881915|gb|ACY04841.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-EKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150 >gi|12055951|emb|CAC21093.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ I +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRSIIQNVMGPSVKLIDSGAECVR 141 >gi|25808735|gb|AAN74494.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|32265523|ref|NP_859555.1| glutamate racemase [Helicobacter hepaticus ATCC 51449] gi|32261571|gb|AAP76621.1| glutamate racemase [Helicobacter hepaticus ATCC 51449] Length = 247 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-DILDKYQ 76 +FDSG+GGL VL+ + IY D PYG K+ + FS L+ + Sbjct: 5 VFDSGVGGLSVLKSLINAKLFEDIIYYGDTARVPYG-----VKDKQTIIKFSLQALEFFT 59 Query: 77 PV---LSVIACNT--AFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPA 130 P + ++ACNT A+ L + + S P + + V A++ T S ++ I++T A Sbjct: 60 PHNIDILIVACNTVSAYALQEMQKHSKIPIVGVIEPGVLAVQNNLKDTDSEIL-IIATRA 118 Query: 131 TLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ Y + L + + ++ +++ + VEE + E + + + + Sbjct: 119 TINSGEYETRLRN--IGFWNLKSLATGLFVPIVEE-----GLLEGAVLESVFHHYFASIT 171 Query: 190 KRTDVIVLACTHYPLI 205 ++L CTH+PLI Sbjct: 172 TPPQAVILGCTHFPLI 187 >gi|261881955|gb|ACY04861.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ +IKQ ++ I Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILSIKQQVK-DKNAPI 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI H Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150 >gi|261881941|gb|ACY04854.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150 >gi|46404907|gb|AAS93324.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + I+ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGIIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|12055937|emb|CAC21086.1| glutamate racemase [Streptococcus pyogenes] gi|12055955|emb|CAC21095.1| glutamate racemase [Streptococcus pyogenes] gi|12055973|emb|CAC21110.1| glutamate racemase [Streptococcus pyogenes] gi|46404903|gb|AAS93322.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ I +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|25808647|gb|AAN74450.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149 >gi|110806389|ref|YP_689909.1| hypothetical protein SFV_2500 [Shigella flexneri 5 str. 8401] gi|110615937|gb|ABF04604.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 230 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 17/172 (9%) Query: 51 PYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSM 102 PYGN + KK L FL S + L +ACNT + ++ E S +FP Sbjct: 4 PYGNRSADDIISLTKKMLTFLQSRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-F 57 Query: 103 AFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV 162 L + + Q + I++T T++ LI S ++ S LA + Sbjct: 58 PILSIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLI 117 Query: 163 EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 EE + IKK + + I+L CTHYP++ + F ++P Sbjct: 118 EEGNLNAPAILNNIKKHVNHLI---SLHPVNEIILGCTHYPIVQNFFEAVAP 166 >gi|25808739|gb|AAN74496.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808625|gb|AAN74439.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149 >gi|25808619|gb|AAN74436.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149 >gi|25808725|gb|AAN74489.1| glutamate racemase [Helicobacter pylori] gi|25808757|gb|AAN74505.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|261881935|gb|ACY04851.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNAMKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150 >gi|227873306|ref|ZP_03991571.1| possible glutamate racemase [Oribacterium sinus F0268] gi|227840873|gb|EEJ51238.1| possible glutamate racemase [Oribacterium sinus F0268] Length = 144 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%) Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 IVL CTH+P + ++ P+PV + D ++ A+ R L + V + S Sbjct: 66 IVLGCTHFPFVKEQIQKALPYPVQFFDGAEGTAKETRHRLEERGLLKEGVQKGEVVLFSS 125 Query: 255 KPDIAMRRLMQGF 267 D + LM+ F Sbjct: 126 NEDSS---LMEAF 135 >gi|12055935|emb|CAC21085.1| glutamate racemase [Streptococcus pyogenes] gi|12055939|emb|CAC21087.1| glutamate racemase [Streptococcus pyogenes] gi|12055949|emb|CAC21092.1| glutamate racemase [Streptococcus pyogenes] gi|12055967|emb|CAC21107.1| glutamate racemase [Streptococcus pyogenes] gi|14475673|gb|AAK62686.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|14475679|gb|AAK62689.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|46404931|gb|AAS93336.1| glutamate racemase [Streptococcus pyogenes] gi|46404933|gb|AAS93337.1| glutamate racemase [Streptococcus pyogenes] gi|115394063|gb|ABI97001.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ I +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|25808621|gb|AAN74437.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASIL-VL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 127 FTPLEILPEVVILGCTHFPLIAQ 149 >gi|46404911|gb|AAS93326.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGRSVKLIDSGAECVR 141 >gi|46404919|gb|AAS93330.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKLTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|46404929|gb|AAS93335.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGSSVKLIDSGAECVR 141 >gi|25808719|gb|AAN74486.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 127 FTPLKILPEVVILGCTHFPLIAQ 149 >gi|261881907|gb|ACY04837.1| glutamate racemase [Helicobacter pylori] gi|261881909|gb|ACY04838.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASIL-VL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 128 FTPLEILPEVVILGCTHFPLIAQ 150 >gi|33521555|gb|AAQ20065.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ I +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|12055945|emb|CAC21090.1| glutamate racemase [Streptococcus pyogenes] gi|12055959|emb|CAC21097.1| glutamate racemase [Streptococcus pyogenes] gi|12055971|emb|CAC21109.1| glutamate racemase [Streptococcus pyogenes] gi|46404913|gb|AAS93327.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|261881947|gb|ACY04857.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 17 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 128 FTPLKILPEVVILGCTHFPLIAQ 150 >gi|12055977|emb|CAC21112.1| glutamate racemase [Streptococcus pyogenes] gi|46404923|gb|AAS93332.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ I +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|261881945|gb|ACY04856.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +V++L CTH+PLI Sbjct: 128 FTPLEILPEVVILGCTHFPLIAQ 150 >gi|167044446|gb|ABZ09122.1| putative Asp/Glu/hydantoin racemase [uncultured marine crenarchaeote HF4000_APKG6D9] Length = 253 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 16/218 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+G L ++++++ + + IY AD +PYG L + + ++ Sbjct: 4 IAVFDSGLGSLSIIKEIQ-KITKSEIIYFADQKNYPYGRKSQAQLSIIIQKTVKLLEKEF 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + V+A NT +L+ D + + P +K A T++ I IL+T + + Sbjct: 63 APEIIVVASNTP-SLMLD-----LSTQKIVDVKPPLKIAKKITKTKQIGILATKSAINSK 116 Query: 136 YTSNLI--HSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKR 191 S I +++ I ++ L VE ++ K + IKK++E + Sbjct: 117 GLSEYIRKNNFSKSFKIFKINGSNLIDLVESGKFLTDKKYCREIIKKDLEIL----SQQS 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 D I L+ TH + + ++ P + ++D+ +A++ Sbjct: 173 IDTITLSSTHLIFLKSLLKKEFP-KIKFIDSGKIVAQK 209 >gi|46404917|gb|AAS93329.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPRFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|25808671|gb|AAN74462.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTLLEILPEVIILGCTHFPLIAQ 149 >gi|12055957|emb|CAC21096.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|14475689|gb|AAK62694.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228 YPL+ + + + V +D+ R Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|12055979|emb|CAC21113.1| glutamate racemase [Streptococcus pyogenes] gi|14475677|gb|AAK62688.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ I +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|12055943|emb|CAC21089.1| glutamate racemase [Streptococcus pyogenes] gi|12055947|emb|CAC21091.1| glutamate racemase [Streptococcus pyogenes] gi|12055953|emb|CAC21094.1| glutamate racemase [Streptococcus pyogenes] gi|12055969|emb|CAC21108.1| glutamate racemase [Streptococcus pyogenes] gi|14475675|gb|AAK62687.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|33521547|gb|AAQ20061.1| glutamate racemase [Streptococcus pyogenes] gi|33521551|gb|AAQ20063.1| glutamate racemase [Streptococcus pyogenes] gi|33521557|gb|AAQ20066.1| glutamate racemase [Streptococcus pyogenes] gi|46404925|gb|AAS93333.1| glutamate racemase [Streptococcus pyogenes] gi|115394071|gb|ABI97005.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|14475695|gb|AAK62697.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228 YPL+ + + + V +D+ R Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|261881939|gb|ACY04853.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 128 FTLLEILPEVIILGCTHFPLIAQ 150 >gi|14475681|gb|AAK62690.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|14475683|gb|AAK62691.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|14475691|gb|AAK62695.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228 YPL+ + + + V +D+ R Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|198385967|gb|ACH86246.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|209486171|gb|ACI48541.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVTSLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228 YPL+ + + + V +D+ R Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|25808755|gb|AAN74504.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTLLEILPEVIILGCTHFPLIAQ 149 >gi|213850149|ref|ZP_03381047.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 130 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 +C I ++ S L E G + +E+++ + E D +VL CTH+PL+ Sbjct: 1 ECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFPLLR 58 Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLL 234 Q+ P +D+ +IARR LL Sbjct: 59 DELLQVLPEGTRLVDSGAAIARRTAWLL 86 >gi|25808623|gb|AAN74438.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I + E+ + + Sbjct: 75 GTKATIQSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILDGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|12055965|emb|CAC21103.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSSLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|14475693|gb|AAK62696.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 13/152 (8%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D R A C+ Sbjct: 115 YPLLRPIIQNVMGPSVKLID------RGAECV 140 >gi|25808631|gb|AAN74442.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808721|gb|AAN74487.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L Sbjct: 16 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|12055933|emb|CAC21084.1| glutamate racemase [Streptococcus pyogenes] gi|12055963|emb|CAC21101.1| glutamate racemase [Streptococcus pyogenes] gi|12055975|emb|CAC21111.1| glutamate racemase [Streptococcus pyogenes] gi|46404921|gb|AAS93331.1| glutamate racemase [Streptococcus pyogenes] gi|46404927|gb|AAS93334.1| glutamate racemase [Streptococcus pyogenes] gi|115394065|gb|ABI97002.1| glutamate racemase [Streptococcus pyogenes] gi|115394067|gb|ABI97003.1| glutamate racemase [Streptococcus pyogenes] gi|115394069|gb|ABI97004.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|25808751|gb|AAN74502.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149 >gi|46404915|gb|AAS93328.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 TSDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|14475687|gb|AAK62693.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVVSLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228 YPL+ + + + V +D+ R Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|126728656|ref|ZP_01744471.1| Glutamate racemase [Sagittula stellata E-37] gi|126710586|gb|EBA09637.1| Glutamate racemase [Sagittula stellata E-37] Length = 251 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 41/189 (21%), Positives = 81/189 (42%), Gaps = 20/189 (10%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 +P+ F+Y AD PYG + + + S + D+ L V+ACNTA + Sbjct: 4 LPDVPFVYFADSAHAPYGVRDANDIYDLTTQAVSRLWDEGCD-LVVLACNTASAAALRRM 62 Query: 96 RSTF--PSMAFLGAVPAIKQAAAYTQSG-----------LISILSTPATLR-RTYTSNLI 141 + ++ LG + +A Q G +++ +TPAT+R R + L Sbjct: 63 QESWVPRDKRVLGVFVPLIEALTARQWGDNSPPREVGIQHVALFATPATVRSRAFQRELA 122 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + + + L +EE + + E ++ ++ ++++ + +L CTH Sbjct: 123 FRAIG-VDVEAQACGGLVDAIEE--GDMILAEALVRSHVDA--LKRKMPTPEAAILGCTH 177 Query: 202 YPLIVHVFR 210 YPL+ +F+ Sbjct: 178 YPLMQDIFQ 186 >gi|12055961|emb|CAC21098.1| glutamate racemase [Streptococcus pyogenes] gi|33521549|gb|AAQ20062.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T + Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194 S + + I L++ + +V AC + I E I K+I + + D Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +VL CTHYPL+ + + + V +D+ R Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|25808653|gb|AAN74453.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 14/141 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNT L +E++ S P + + ++ AIKQ + ++ +L Sbjct: 16 DFFKPHQIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLI 205 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLI 147 >gi|14475685|gb|AAK62692.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|198385961|gb|ACH86243.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVISLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228 YPL+ + + + V +D+ R Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141 >gi|330904118|gb|EGH34690.1| glutamate racemase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 44 Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 16/29 (55%), Positives = 22/29 (75%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVAD 46 IFDSG+GGL VL ++R L+P +Y+AD Sbjct: 16 IFDSGVGGLSVLNEVRQLLPSESLLYLAD 44 >gi|25808637|gb|AAN74445.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIK+ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + SY++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQSYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +VI+L CTH+PLI Sbjct: 124 RYYFTPLKILPEVIILGCTHFPLIAQ 149 >gi|261881917|gb|ACY04842.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ + ++ Sbjct: 14 EALDFFKPHEIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNTPIL 73 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 74 -VLGTKATIQSNAYDNALKKQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +VI+L CTH+PLI Sbjct: 125 RYYFTPLKILPEVIILGCTHFPLIAQ 150 >gi|25808767|gb|AAN74510.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ + ++ Sbjct: 13 EALDFFKPHEIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNTPIL 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 -VLGTKATIQSNAYDNALKKQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +VI+L CTH+PLI Sbjct: 124 RYYFTPLKILPEVIILGCTHFPLIAQ 149 >gi|7671531|emb|CAB89281.1| hypothetical protein [Clostridium cellulolyticum H10] Length = 125 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%) Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 IKK+++G + VL CTH+P+ ++ F+++ P +D +D S+ R + LL Sbjct: 31 IKKKLDGYNL----NNYKTFVLGCTHFPIYINAFKEVLPPFIDIIDGSEGTIRYLKLLLE 86 Query: 236 RINTHQTRVFDDHALFL-SGK 255 + T + + +F SG+ Sbjct: 87 ERHLISTNINGGNIVFFDSGR 107 >gi|261881949|gb|ACY04858.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI Sbjct: 125 RYYFTPLKILPEVVILGCTHFPLIAQ 150 >gi|309807427|ref|ZP_07701390.1| glutamate racemase domain protein [Lactobacillus iners LactinV 01V1-a] gi|308169349|gb|EFO71404.1| glutamate racemase domain protein [Lactobacillus iners LactinV 01V1-a] Length = 94 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 8/52 (15%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN 54 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGD 44 >gi|25808701|gb|AAN74477.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 14/141 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLI 205 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLI 147 >gi|261881927|gb|ACY04847.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 VI+L CTH+PLI Sbjct: 128 FAPLKILPKVIILGCTHFPLIAQ 150 >gi|261881923|gb|ACY04845.1| glutamate racemase [Helicobacter pylori] gi|261881925|gb|ACY04846.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 75 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127 Query: 185 IEKEGKRTDVIVLACTHYPLI 205 VI+L CTH+PLI Sbjct: 128 FAPLKILPKVIILGCTHFPLI 148 >gi|25808733|gb|AAN74493.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808651|gb|AAN74452.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207 +VI+L CTH+PLI Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149 >gi|25808723|gb|AAN74488.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 74 Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T AT++ N + Y++ H+ ++ + +EE I E E+ + + Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126 Query: 185 IEKEGKRTDVIVLACTHYPLI 205 VI+L CTH+PLI Sbjct: 127 FAPLKILPKVIILGCTHFPLI 147 >gi|25808743|gb|AAN74498.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 17/144 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L +E++ S P + + ++ AIK+ ++ I Sbjct: 13 EALDFFKPHEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205 + +VI+L CTH+PLI Sbjct: 124 RYYFTPLKILPEVIILGCTHFPLI 147 >gi|54026948|ref|YP_121190.1| hypothetical protein nfa49740 [Nocardia farcinica IFM 10152] gi|54018456|dbj|BAD59826.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 441 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Query: 216 PVDWLDNSDSI-ARRARCLLPRINTH--QTRVFDDHALFLSGKPDI 258 PV W+D+ D+I A LL RI H + RVFD HA L G+P + Sbjct: 222 PVTWVDSPDAITAAEIEALLTRIPAHSRRGRVFDAHAPLLRGQPSL 267 >gi|25808705|gb|AAN74479.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 17/146 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207 + +V++L CTH+PLI Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAQ 149 >gi|167647143|ref|YP_001684806.1| aspartate racemase [Caulobacter sp. K31] gi|167349573|gb|ABZ72308.1| aspartate racemase [Caulobacter sp. K31] Length = 220 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 18/152 (11%) Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 IACNTA S P + + +A + G++ A RRT++ I Sbjct: 77 IACNTAHAYADQVRASGLPLVDLIETAGLAAKADGAQRVGVLGTGGALALYRRTFSHLGI 136 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI---KKEIEGCFIEK-EGKRTDVIVL 197 + H +VE A +IK ++ +E + GK V+V Sbjct: 137 EAVTLDDH----------EQVEFMALLYRIKHGDVGPASRETMAALAHRLVGKGAQVVVA 186 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 CT PL++ S V ++D ++++ARR Sbjct: 187 GCTEVPLVMSA----SDLTVPFIDATEALARR 214 >gi|239932810|ref|ZP_04689763.1| glutamate racemase [Streptomyces ghanaensis ATCC 14672] Length = 98 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L ++R L P+ + D G P+G L R + + + Sbjct: 22 IALMDSGIGLLAATAEVRRLRPDADLVLSLDPDGMPWGPRTPEDLTGRALAVAE-AAAAH 80 Query: 76 QPVLSVIACNTA 87 +P ++ CNTA Sbjct: 81 RPDALIVGCNTA 92 >gi|225010451|ref|ZP_03700922.1| glutamate racemase [Flavobacteria bacterium MS024-3C] gi|225005280|gb|EEG43231.1| glutamate racemase [Flavobacteria bacterium MS024-3C] Length = 143 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 13/63 (20%), Positives = 37/63 (58%) Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 +E+ + ++ + + K D +VL CTHYP ++ +++ ++ +D + ++A++ + + Sbjct: 27 EEVAEVLKSYLLPMQEKGIDRLVLGCTHYPYLIPAIKKILSSRIEIIDAAGAVAKQTKKV 86 Query: 234 LPR 236 L + Sbjct: 87 LEK 89 >gi|253687770|ref|YP_003016960.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754348|gb|ACT12424.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 238 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 24/174 (13%) Query: 65 MFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 M + IL+ +I CNTA F +K + R+ S+ + QA + + Sbjct: 64 MLQYMKILENAGAECIIIPCNTAHYWFNELKQQCRAEMISI-----IDVTCQAIKHANTT 118 Query: 122 LISILSTPATLR-RTYTSNLIHSYV-----SQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + +L+T AT++ R Y NLI + + H V I A + + A ++ Sbjct: 119 RVGLLATTATVKARIYQDNLITDNIECFTPNDADQHQVMESIYAYKSGDIAGAYRMLS-P 177 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +K + +EK I+L CT PLI+ +++ P ++D ++ + ++ Sbjct: 178 VKDRLLHAGVEK-------IILGCTELPLILE--QEVKTSPQHYVDATEELIKK 222 >gi|261344626|ref|ZP_05972270.1| putative aspartate racemase [Providencia rustigianii DSM 4541] gi|282567542|gb|EFB73077.1| putative aspartate racemase [Providencia rustigianii DSM 4541] Length = 235 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 16/166 (9%) Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140 VI CNTA DEL+ + + L + A TQ I +L+T AT+ Sbjct: 80 VIPCNTAHFWF-DELKKSC-HVEILSIIEATMNEVISTQKNKIGLLATDATMHMGLYQQS 137 Query: 141 IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 I C + MI+ S + + ED +KK+ + F ++IVL Sbjct: 138 IEDQGLICIKPDNENQKMIMKSIYLLKSGEFSLAEDIMKKQADILF----SNGAEIIVLG 193 Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 CT P+I+ ++ P ++D++ ++ R IN ++ R+ Sbjct: 194 CTEVPVILS--NEVKSHPDKYIDSTGALVRAG------INWYKKRI 231 >gi|227327191|ref|ZP_03831215.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 238 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 29/189 (15%) Query: 65 MFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 M + IL+ +I CNTA F +K + R+ S+ + QA + + Sbjct: 64 MLQYMKILENAGAECIIIPCNTAHYWFNDLKQQCRAEMISI-----IDVTCQAIKHANTT 118 Query: 122 LISILSTPATLR-RTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKED 174 + +L+T AT++ R Y NLI + C+ H V I A + + A + Sbjct: 119 RVGLLATTATVKARIYQDNLITDNID-CYTPDDADQHQVMESIYAYKSGDIAGAYSLLS- 176 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +K + +EK I+L CT PLI+ +++ P ++D ++ + ++ + Sbjct: 177 PVKDRLLQAGVEK-------IILGCTELPLILE--QEVRTSPQHYVDATEELIKKT---V 224 Query: 235 PRINTHQTR 243 TH TR Sbjct: 225 EWYFTHNTR 233 >gi|261881921|gb|ACY04844.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 17/144 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNT L +E++ S P + + ++ AIK+ ++ I Sbjct: 14 EALDFFKPHKIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPI 72 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 124 Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205 + +VI+L CTH+PLI Sbjct: 125 RYYFTPLKILPEVIILGCTHFPLI 148 >gi|50120438|ref|YP_049605.1| aspartate racemase [Pectobacterium atrosepticum SCRI1043] gi|49610964|emb|CAG74409.1| probable aspartate racemase [Pectobacterium atrosepticum SCRI1043] Length = 238 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 18/157 (11%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 M + IL+ +I CNTA +EL+ S + + QA T + + Sbjct: 64 MLQYMKILENAGAECIIIPCNTAHYWF-NELKQQC-SAEMISIIDVTCQAIRNTNTTRVG 121 Query: 125 ILSTPATLR-RTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKEDEIK 177 +L+T AT++ R Y NLI + +C+ H V I A + + A G +K Sbjct: 122 LLATTATVKARIYQDNLITDNI-ECYTPDDADQHQVMESIYAYKSGDIA-GAYSMLSPVK 179 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 + +EK I+L CT PLI+ ++SP Sbjct: 180 DRLLQAGVEK-------IILGCTELPLILEQEVRISP 209 >gi|25808741|gb|AAN74497.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 17/144 (11%) Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123 + LD ++P L ++ACNT L +E++ S P + + ++ AIK+ ++ I Sbjct: 13 EALDFFKPHKIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPI 71 Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T AT++ N + Y++ H+ ++ + +EE I E E+ + Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123 Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205 + +VI+L CTH+PLI Sbjct: 124 RYYFTPLKILPEVIILGCTHFPLI 147 >gi|325123649|gb|ADY83172.1| putative aspartate racemase [Acinetobacter calcoaceticus PHEA-2] Length = 236 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 16/181 (8%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 N ++ L+K +L IL+ Q +I CNTA + T M + ++ Sbjct: 55 NQDNKPLEKMAEYL--KILEAAQVGCIIIPCNTAHFWFNQLQKRTQTKM-----ISIVES 107 Query: 114 AAAYTQSGLIS---ILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A + Q I IL+T AT+ Y S I + + + + +Y G Sbjct: 108 AVHFIQDSQIDEVCILATSATINTELYQSQFIENSIGFSTPSAEMQNKVMQSIYQYKAGN 167 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + E+ KE+ + KR +LACT PLI+ + +P ++D +D + + Sbjct: 168 IQQAREMMKEVINFYT---NKRNIKFLLACTEIPLILE--ESIEAYPELFIDTTDVLIKN 222 Query: 230 A 230 A Sbjct: 223 A 223 >gi|261821065|ref|YP_003259171.1| aspartate racemase [Pectobacterium wasabiae WPP163] gi|261605078|gb|ACX87564.1| aspartate racemase [Pectobacterium wasabiae WPP163] Length = 238 Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 26/175 (14%) Query: 65 MFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 M + IL+ +I CNTA F +K + R+ S+ + QA + Sbjct: 64 MLQYMKILENAGAECIIIPCNTAHYWFNELKQQCRAEMISI-----IDVTCQAIRSANTT 118 Query: 122 LISILSTPATLR-RTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKED 174 + +L+T AT+ R Y NLI+ + +C+ H V I A + A G Sbjct: 119 RVGLLATTATVTARIYQDNLINDNI-ECYTPDEADQHQVMESIYAYKSGNIA-GAYSMLS 176 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +K + +EK I+L CT PLI+ +++ P ++D ++ + ++ Sbjct: 177 PVKDRLLQAGVEK-------IILGCTELPLILE--QEIKTTPQHYVDATEELIKK 222 Searching..................................................done Results from round 2 >gi|254780905|ref|YP_003065318.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62] gi|254040582|gb|ACT57378.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62] Length = 271 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 271/271 (100%), Positives = 271/271 (100%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL Sbjct: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS Sbjct: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI Sbjct: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH Sbjct: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS Sbjct: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 >gi|212638431|ref|YP_002314951.1| glutamate racemase [Anoxybacillus flavithermus WK1] gi|212559911|gb|ACJ32966.1| Glutamate racemase [Anoxybacillus flavithermus WK1] Length = 278 Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ I + DSG+GGL V +++ +P+ +Y+ D PYG +++ + + + Sbjct: 14 LERPIGVIDSGVGGLTVAKEIMRQLPKEQIVYLGDTARCPYGPRPREEIRQFTWEMTNYL 73 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L Y + VIACNTA + +E+R T ++ +G V P + A T++ I ++ T Sbjct: 74 L-GYDIKMLVIACNTATAVALEEIRHTL-NIPVIGVVHPGARTALKITKNYHIGVIGTIG 131 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S S I ++ VE + + +E K+ + + + Sbjct: 132 TVKSGAYEQALKSINSDVKIESLACPKFVPLVESG----QFEGEEAKQIVAESLEPFKDR 187 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 D ++L CTHYPL+ + +Q V + + D AR +L T +H Sbjct: 188 PIDTLILGCTHYPLLSPLIQQYMGEHVKLICSGDETAREVSTILHHSGLLYTGNKRREHI 247 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G + + + FG Sbjct: 248 FFTTGSKETFQQIASKWFG 266 >gi|295399429|ref|ZP_06809411.1| glutamate racemase [Geobacillus thermoglucosidasius C56-YS93] gi|312110012|ref|YP_003988328.1| glutamate racemase [Geobacillus sp. Y4.1MC1] gi|294978895|gb|EFG54491.1| glutamate racemase [Geobacillus thermoglucosidasius C56-YS93] gi|311215113|gb|ADP73717.1| glutamate racemase [Geobacillus sp. Y4.1MC1] Length = 264 Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I + DSG+GGL V +++ +P+ +Y+ D PYG + +++ + + + Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKERIVYLGDTARCPYGPRPEEEIRQFTWEMTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + VIACNTA ++ DE+R + LG V P + A T++G I ++ T Sbjct: 61 L-QYNIKMLVIACNTATAVVLDEIREQL-DIPVLGVVHPGARAALKATKNGHIGVIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + H+ ++ VE + +E KK + + Sbjct: 119 TVKSGAYEKALKSINPRVHVESLACPKFVPLVESG----NFEGEEAKKIVAESLEPFKSS 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 DV++L CTHYPL+ + ++ V + + D AR +L + T + +H Sbjct: 175 NMDVLILGCTHYPLLSPLIKEYMGKRVKLICSGDETAREVSAILHHSHLLYTGQRAAEHL 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G ++ + + FG Sbjct: 235 FFTTGPKELFQKIASKWFG 253 >gi|239827939|ref|YP_002950563.1| glutamate racemase [Geobacillus sp. WCH70] gi|259509915|sp|C5D5M9|MURI_GEOSW RecName: Full=Glutamate racemase gi|239808232|gb|ACS25297.1| glutamate racemase [Geobacillus sp. WCH70] Length = 264 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 119/259 (45%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I + DSG+GGL V +++ +P+ +Y+ D PYG +++ + + + Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKERIVYLGDTARCPYGPRPKEEIRQFTWEMTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + VIACNTA ++ DE+R + LG V P + A T++G I ++ T Sbjct: 61 L-RYNIKMLVIACNTATAVVLDEIREQL-DIPVLGVVHPGARAALKATKNGHIGVIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + + ++ VE + +E +K + + Sbjct: 119 TVKSGAYEKALKSINHRVRVESLACPKFVPLVESG----NFEGEEARKIVAESLEPFKSS 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 DV++L CTHYPL+ + ++ V + + D AR +L + T + +H Sbjct: 175 NMDVLILGCTHYPLLSPLIKEYMGKRVKLICSGDETAREVSAILHHSHLLYTGQREAEHL 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G ++ + + FG Sbjct: 235 FFTTGSKELFQKIASKWFG 253 >gi|163843460|ref|YP_001627864.1| glutamate racemase [Brucella suis ATCC 23445] gi|189030357|sp|B0CGZ3|MURI_BRUSI RecName: Full=Glutamate racemase gi|163674183|gb|ABY38294.1| glutamate racemase [Brucella suis ATCC 23445] Length = 277 Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 140/260 (53%), Positives = 191/260 (73%), Gaps = 1/260 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF + Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGMVPAIKPAAERTSSGLVSVLATPGT 136 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I CFIEK+GKR Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250 TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 F S KPD A+RRLMQGFGL+ Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276 >gi|296331613|ref|ZP_06874082.1| glutamate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675428|ref|YP_003867100.1| glutamate racemase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151208|gb|EFG92088.1| glutamate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413672|gb|ADM38791.1| glutamate racemase [Bacillus subtilis subsp. spizizenii str. W23] Length = 271 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 115/259 (44%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 LD + + VIACNTA + ++++ + + +G + P + A T++ I ++ T Sbjct: 61 LDNHHIKMLVIACNTATAIALEDIQRSV-GIPVVGVIQPGARAAIKVTENQHIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE K ++ +K + Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVK----TSLYPLKDT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH Sbjct: 176 SIDTLILGCTHYPILKESIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIVPDHQ 235 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G D + FG Sbjct: 236 FLTTGARDQFAKIADDWFG 254 >gi|254701935|ref|ZP_05163763.1| glutamate racemase [Brucella suis bv. 5 str. 513] gi|261752501|ref|ZP_05996210.1| glutamate racemase [Brucella suis bv. 5 str. 513] gi|261742254|gb|EEY30180.1| glutamate racemase [Brucella suis bv. 5 str. 513] Length = 277 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 139/260 (53%), Positives = 190/260 (73%), Gaps = 1/260 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGN E+ ALK+R++ LF + Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNREEEALKRRIIELFGEF 76 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I CFIEK+GKR Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250 TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 F S KPD A+RRLMQGFGL+ Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276 >gi|17987078|ref|NP_539712.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M] gi|23502072|ref|NP_698199.1| glutamate racemase [Brucella suis 1330] gi|62290106|ref|YP_221899.1| glutamate racemase [Brucella abortus bv. 1 str. 9-941] gi|82700029|ref|YP_414603.1| glutamate racemase [Brucella melitensis biovar Abortus 2308] gi|161619150|ref|YP_001593037.1| glutamate racemase [Brucella canis ATCC 23365] gi|189024344|ref|YP_001935112.1| glutamate racemase [Brucella abortus S19] gi|225627664|ref|ZP_03785701.1| glutamate racemase [Brucella ceti str. Cudo] gi|225852691|ref|YP_002732924.1| glutamate racemase [Brucella melitensis ATCC 23457] gi|237815612|ref|ZP_04594609.1| glutamate racemase [Brucella abortus str. 2308 A] gi|254689415|ref|ZP_05152669.1| glutamate racemase [Brucella abortus bv. 6 str. 870] gi|254693900|ref|ZP_05155728.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya] gi|254697550|ref|ZP_05159378.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59] gi|254704480|ref|ZP_05166308.1| glutamate racemase [Brucella suis bv. 3 str. 686] gi|254706624|ref|ZP_05168452.1| glutamate racemase [Brucella pinnipedialis M163/99/10] gi|254710266|ref|ZP_05172077.1| glutamate racemase [Brucella pinnipedialis B2/94] gi|254714263|ref|ZP_05176074.1| glutamate racemase [Brucella ceti M644/93/1] gi|254717699|ref|ZP_05179510.1| glutamate racemase [Brucella ceti M13/05/1] gi|254730444|ref|ZP_05189022.1| glutamate racemase [Brucella abortus bv. 4 str. 292] gi|256031760|ref|ZP_05445374.1| glutamate racemase [Brucella pinnipedialis M292/94/1] gi|256044845|ref|ZP_05447749.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1] gi|256061275|ref|ZP_05451425.1| glutamate racemase [Brucella neotomae 5K33] gi|256113750|ref|ZP_05454554.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether] gi|256159930|ref|ZP_05457648.1| glutamate racemase [Brucella ceti M490/95/1] gi|256255161|ref|ZP_05460697.1| glutamate racemase [Brucella ceti B1/94] gi|256257661|ref|ZP_05463197.1| glutamate racemase [Brucella abortus bv. 9 str. C68] gi|256263818|ref|ZP_05466350.1| glutamate racemase [Brucella melitensis bv. 2 str. 63/9] gi|260168894|ref|ZP_05755705.1| glutamate racemase [Brucella sp. F5/99] gi|260546655|ref|ZP_05822394.1| glutamate racemase [Brucella abortus NCTC 8038] gi|260565553|ref|ZP_05836037.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M] gi|260566276|ref|ZP_05836746.1| glutamate racemase [Brucella suis bv. 4 str. 40] gi|260754937|ref|ZP_05867285.1| glutamate racemase [Brucella abortus bv. 6 str. 870] gi|260758153|ref|ZP_05870501.1| glutamate racemase [Brucella abortus bv. 4 str. 292] gi|260761979|ref|ZP_05874322.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59] gi|260883947|ref|ZP_05895561.1| glutamate racemase [Brucella abortus bv. 9 str. C68] gi|261214189|ref|ZP_05928470.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya] gi|261219542|ref|ZP_05933823.1| glutamate racemase [Brucella ceti M13/05/1] gi|261222358|ref|ZP_05936639.1| glutamate racemase [Brucella ceti B1/94] gi|261314084|ref|ZP_05953281.1| glutamate racemase [Brucella pinnipedialis M163/99/10] gi|261317828|ref|ZP_05957025.1| glutamate racemase [Brucella pinnipedialis B2/94] gi|261322037|ref|ZP_05961234.1| glutamate racemase [Brucella ceti M644/93/1] gi|261325282|ref|ZP_05964479.1| glutamate racemase [Brucella neotomae 5K33] gi|261755160|ref|ZP_05998869.1| glutamate racemase [Brucella suis bv. 3 str. 686] gi|261758384|ref|ZP_06002093.1| glutamate racemase [Brucella sp. F5/99] gi|265988858|ref|ZP_06101415.1| glutamate racemase [Brucella pinnipedialis M292/94/1] gi|265991273|ref|ZP_06103830.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1] gi|265995109|ref|ZP_06107666.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether] gi|265998323|ref|ZP_06110880.1| glutamate racemase [Brucella ceti M490/95/1] gi|294852530|ref|ZP_06793203.1| glutamate racemase [Brucella sp. NVSL 07-0026] gi|297248502|ref|ZP_06932220.1| glutamate racemase [Brucella abortus bv. 5 str. B3196] gi|54037864|sp|P63632|MURI_BRUSU RecName: Full=Glutamate racemase gi|54041256|sp|P63631|MURI_BRUME RecName: Full=Glutamate racemase gi|75496705|sp|Q57CU6|MURI_BRUAB RecName: Full=Glutamate racemase gi|123547536|sp|Q2YRV4|MURI_BRUA2 RecName: Full=Glutamate racemase gi|189082953|sp|A9M5L1|MURI_BRUC2 RecName: Full=Glutamate racemase gi|229486232|sp|B2S641|MURI_BRUA1 RecName: Full=Glutamate racemase gi|254766109|sp|C0RJG2|MURI_BRUMB RecName: Full=Glutamate racemase gi|17982736|gb|AAL51976.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M] gi|23348029|gb|AAN30114.1| glutamate racemase [Brucella suis 1330] gi|62196238|gb|AAX74538.1| MurI, glutamate racemase [Brucella abortus bv. 1 str. 9-941] gi|82616130|emb|CAJ11173.1| Asp/Glu racemase [Brucella melitensis biovar Abortus 2308] gi|161335961|gb|ABX62266.1| glutamate racemase [Brucella canis ATCC 23365] gi|189019916|gb|ACD72638.1| Asp/Glu racemase [Brucella abortus S19] gi|225617669|gb|EEH14714.1| glutamate racemase [Brucella ceti str. Cudo] gi|225641056|gb|ACO00970.1| glutamate racemase [Brucella melitensis ATCC 23457] gi|237788910|gb|EEP63121.1| glutamate racemase [Brucella abortus str. 2308 A] gi|260095705|gb|EEW79582.1| glutamate racemase [Brucella abortus NCTC 8038] gi|260151621|gb|EEW86715.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M] gi|260155794|gb|EEW90874.1| glutamate racemase [Brucella suis bv. 4 str. 40] gi|260668471|gb|EEX55411.1| glutamate racemase [Brucella abortus bv. 4 str. 292] gi|260672411|gb|EEX59232.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59] gi|260675045|gb|EEX61866.1| glutamate racemase [Brucella abortus bv. 6 str. 870] gi|260873475|gb|EEX80544.1| glutamate racemase [Brucella abortus bv. 9 str. C68] gi|260915796|gb|EEX82657.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya] gi|260920942|gb|EEX87595.1| glutamate racemase [Brucella ceti B1/94] gi|260924631|gb|EEX91199.1| glutamate racemase [Brucella ceti M13/05/1] gi|261294727|gb|EEX98223.1| glutamate racemase [Brucella ceti M644/93/1] gi|261297051|gb|EEY00548.1| glutamate racemase [Brucella pinnipedialis B2/94] gi|261301262|gb|EEY04759.1| glutamate racemase [Brucella neotomae 5K33] gi|261303110|gb|EEY06607.1| glutamate racemase [Brucella pinnipedialis M163/99/10] gi|261738368|gb|EEY26364.1| glutamate racemase [Brucella sp. F5/99] gi|261744913|gb|EEY32839.1| glutamate racemase [Brucella suis bv. 3 str. 686] gi|262552791|gb|EEZ08781.1| glutamate racemase [Brucella ceti M490/95/1] gi|262766222|gb|EEZ12011.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether] gi|263002057|gb|EEZ14632.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1] gi|263093947|gb|EEZ17881.1| glutamate racemase [Brucella melitensis bv. 2 str. 63/9] gi|264661055|gb|EEZ31316.1| glutamate racemase [Brucella pinnipedialis M292/94/1] gi|294821119|gb|EFG38118.1| glutamate racemase [Brucella sp. NVSL 07-0026] gi|297175671|gb|EFH35018.1| glutamate racemase [Brucella abortus bv. 5 str. B3196] gi|326409213|gb|ADZ66278.1| Asp/Glu racemase [Brucella melitensis M28] gi|326538922|gb|ADZ87137.1| glutamate racemase [Brucella melitensis M5-90] Length = 277 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 140/260 (53%), Positives = 191/260 (73%), Gaps = 1/260 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF + Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I CFIEK+GKR Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250 TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 F S KPD A+RRLMQGFGL+ Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276 >gi|256369619|ref|YP_003107129.1| glutamate racemase [Brucella microti CCM 4915] gi|255999781|gb|ACU48180.1| glutamate racemase [Brucella microti CCM 4915] Length = 277 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 140/260 (53%), Positives = 190/260 (73%), Gaps = 1/260 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF + Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT +LI S+ S+CH+ LV + LA E + G E + +I CFIEK+GKR Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAVIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250 TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 F S KPD A+RRLMQGFGL+ Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276 >gi|306840341|ref|ZP_07473112.1| glutamate racemase [Brucella sp. BO2] gi|306844094|ref|ZP_07476688.1| glutamate racemase [Brucella sp. BO1] gi|306275537|gb|EFM57269.1| glutamate racemase [Brucella sp. BO1] gi|306289688|gb|EFM60880.1| glutamate racemase [Brucella sp. BO2] Length = 277 Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats. Identities = 140/260 (53%), Positives = 191/260 (73%), Gaps = 1/260 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF + Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I CFIEK+GKR Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250 TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 F S KPD A+RRLMQGFGL+ Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276 >gi|254719253|ref|ZP_05181064.1| glutamate racemase [Brucella sp. 83/13] gi|265984252|ref|ZP_06096987.1| glutamate racemase [Brucella sp. 83/13] gi|306838003|ref|ZP_07470861.1| glutamate racemase [Brucella sp. NF 2653] gi|264662844|gb|EEZ33105.1| glutamate racemase [Brucella sp. 83/13] gi|306406927|gb|EFM63148.1| glutamate racemase [Brucella sp. NF 2653] Length = 277 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 140/260 (53%), Positives = 191/260 (73%), Gaps = 1/260 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF + Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T Sbjct: 77 ITNYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I CFIEK+GKR Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250 TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 F S KPD A+RRLMQGFGL+ Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276 >gi|321312372|ref|YP_004204659.1| glutamate racemase [Bacillus subtilis BSn5] gi|320018646|gb|ADV93632.1| glutamate racemase [Bacillus subtilis BSn5] Length = 271 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE K ++ +K + Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVK----TSLYPLKDT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ DH Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSANAPDHQ 235 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G D + FG Sbjct: 236 FLTTGARDQFAKIADDWFG 254 >gi|221310780|ref|ZP_03592627.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168] gi|221315105|ref|ZP_03596910.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320023|ref|ZP_03601317.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324306|ref|ZP_03605600.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. SMY] gi|3241851|dbj|BAA28871.1| glutamate racemase [Bacillus subtilis] gi|291485269|dbj|BAI86344.1| glutamate racemase [Bacillus subtilis subsp. natto BEST195] Length = 271 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE K ++ +K + Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVK----TSLYPLKDT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 235 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G D + FG Sbjct: 236 FLTTGARDQFAKIADDWFG 254 >gi|47776277|dbj|BAD20742.1| glutamate racemase [Bacillus subtilis] Length = 271 Score = 329 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE K + + ++ + Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESG----KFLDQTADEIVKTSLYPLKDT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 235 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G D + FG Sbjct: 236 FLTTGARDQFAKIADDWFG 254 >gi|154686974|ref|YP_001422135.1| glutamate racemase [Bacillus amyloliquefaciens FZB42] gi|166231025|sp|A7Z7C8|MURI_BACA2 RecName: Full=Glutamate racemase gi|154352825|gb|ABS74904.1| RacE [Bacillus amyloliquefaciens FZB42] Length = 272 Score = 329 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + + Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + ++++ + +G + P + A T++ I ++ T Sbjct: 62 LENHHIKMLVIACNTATAIALEDIQRK-TDIPVVGVIQPGARTAIKVTKNQHIGVIGTVN 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + ++ + + +L VE + E+ + E +G Sbjct: 121 TIKSRAYEQALLGLNAELQVENTACPLLVPFVESGRFLQESAEEAV----EASLEPLKGT 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ + V + + D AR +L +Q++ +H Sbjct: 177 SIDTLILGCTHYPILKDPIQNYMGEHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQ 236 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G+ + + FG Sbjct: 237 FLTTGERNGFAKIAEDWFG 255 >gi|255767654|ref|NP_390717.2| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168] gi|251757300|sp|P94556|MURI1_BACSU RecName: Full=Glutamate racemase 1 gi|225185282|emb|CAB14799.2| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168] Length = 272 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T Sbjct: 62 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE K ++ +K + Sbjct: 121 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVK----TSLYPLKDT 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH Sbjct: 177 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 236 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G D + FG Sbjct: 237 FLTTGARDQFAKIADDWFG 255 >gi|83753859|pdb|1ZUW|A Chain A, Crystal Structure Of B.Subtilis Glutamate Racemase (Race) With D-Glu gi|83753860|pdb|1ZUW|B Chain B, Crystal Structure Of B.Subtilis Glutamate Racemase (Race) With D-Glu gi|83753861|pdb|1ZUW|C Chain C, Crystal Structure Of B.Subtilis Glutamate Racemase (Race) With D-Glu gi|1770057|emb|CAA99552.1| glutamate racemase [Bacillus subtilis] Length = 272 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + + Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T Sbjct: 62 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE K + + ++ + Sbjct: 121 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESG----KFLDQTADEIVKTSLYPLKDT 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH Sbjct: 177 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 236 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G D + FG Sbjct: 237 FLTTGARDQFAKIADDWFG 255 >gi|328912861|gb|AEB64457.1| Glutamate racemase [Bacillus amyloliquefaciens LL3] Length = 271 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + ++++ + +G + P + A T++ I ++ T Sbjct: 61 LENHHIKMLVIACNTATAIALEDIQRK-TDIPVVGVIQPGARTAIKVTKNQHIGVIGTIN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE + ++ + +E +G Sbjct: 120 TIKSRAYEQALLGLNADLQVENMACPLLVPFVESG----RFLQESAAEAVEASLEPLKGT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ + V + + D AR +L +Q++ +H Sbjct: 176 AIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQ 235 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G+ + + FG Sbjct: 236 FLTTGERNGFAKIAEDWFG 254 >gi|163791540|ref|ZP_02185944.1| glutamate racemase [Carnobacterium sp. AT7] gi|159873176|gb|EDP67276.1| glutamate racemase [Carnobacterium sp. AT7] Length = 272 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 10/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I DSG+GGL V+++ +P YV D PYG + +++ + +L Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEEQVRQFTWEMTHFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 +K + VIACNTA + ++L+ ++ +G + P + A T++ I ++ T T Sbjct: 63 NK-DIKMLVIACNTATAVALEDLKKKL-AIPIIGVILPGSRAAIKATKNNHIGVIGTEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +I S + + ++ VE G I KK + + K Sbjct: 121 VKSEKYKKMIQSKDTLASVSSLACPKFVPIVESNEYGSAIA----KKIVAETLKPFKNKN 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDH 248 D ++L CTHYPL+ + + + V +D+ +L N + + + Sbjct: 177 IDTLILGCTHYPLLRPIIQNVMGDSVTLIDSGAETISEVSTILDYFNLAELSKNKEVSER 236 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 F +G + Q G Sbjct: 237 KFFTTGSTHMFNDIASQWLG 256 >gi|328554458|gb|AEB24950.1| glutamate racemase [Bacillus amyloliquefaciens TA208] Length = 271 Score = 327 bits (840), Expect = 9e-88, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + + Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + ++++ + +G + P + A T++ I ++ T Sbjct: 61 LENHHIKMLVIACNTATAIALEDIQRK-TDIPVVGVIQPGARTAIKVTKNQHIGVIGTIN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + + +L VE + ++ + +E +G Sbjct: 120 TIKSRAYEQALLGLNADLQVENTACPLLVPFVESG----RFLQESAAEAVEASLEPLKGT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ + V + + D AR +L +Q++ +H Sbjct: 176 AIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQ 235 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G+ + + FG Sbjct: 236 FLTTGERNGFAKIAEDWFG 254 >gi|148560126|ref|YP_001259114.1| glutamate racemase [Brucella ovis ATCC 25840] gi|166231028|sp|A5VQW7|MURI_BRUO2 RecName: Full=Glutamate racemase gi|148371383|gb|ABQ61362.1| glutamate racemase [Brucella ovis ATCC 25840] Length = 277 Score = 327 bits (840), Expect = 9e-88, Method: Composition-based stats. Identities = 140/260 (53%), Positives = 189/260 (72%), Gaps = 1/260 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF + Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT +LI S+ S+CH+ LV LA+ E + G E + +I CFIEK GKR Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGVDGLAAIAEAHIRGESFDEALVMAQIAPCFIEKGGKR 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250 TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 F S KPD A+RRLMQGFGL+ Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276 >gi|227822188|ref|YP_002826159.1| glutamate racemase [Sinorhizobium fredii NGR234] gi|254766122|sp|C3MD87|MURI_RHISN RecName: Full=Glutamate racemase gi|227341188|gb|ACP25406.1| glutamate racemase [Sinorhizobium fredii NGR234] Length = 267 Score = 326 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 146/256 (57%), Positives = 194/256 (75%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF D+L Sbjct: 7 KPILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGDLLR 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ P + +IACNTAFTL+ +LR+ +P M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 67 EHDPEICIIACNTAFTLVGADLRAAYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ SQCH+ LV S LA E Y G K++++ + EI CF+E +G++TD Sbjct: 127 RAYTRDLIQSFASQCHVRLVGSENLARMAEAYIRGEKLEDEIVLAEIAPCFVEMDGRKTD 186 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F S Sbjct: 187 IVVLACTHYPFMENVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTS 246 Query: 254 GKPDIAMRRLMQGFGL 269 GKPD A RRLMQGFGL Sbjct: 247 GKPDFATRRLMQGFGL 262 >gi|196250191|ref|ZP_03148885.1| glutamate racemase [Geobacillus sp. G11MC16] gi|196210375|gb|EDY05140.1| glutamate racemase [Geobacillus sp. G11MC16] Length = 264 Score = 326 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 1 MERAIGVIDSGVGGLTVAKEIIRQLPKERIIYLGDTARCPYGPRPIEEIRQFTWQMIHY- 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + VIACNTA ++ DE+R+ + LG V P + A T++G I ++ T Sbjct: 60 LQQYPLKMLVIACNTATAVVLDEVRAKL-DIPVLGVVHPGARAALKATKNGHIGVIGTVG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R + S + H+ ++ VE + ++ + + Sbjct: 119 TVRSKAYEKALQSINPRVHVESLACPKFVPLVESG----DFEGEKALAIVAESLAPLRPR 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 DV++L CTHYPL+ + R+ V + + D AR +L + T +H Sbjct: 175 PIDVLILGCTHYPLLAPLIREYMGKKVKLICSGDETAREVSAILHHSHLLYTGGCEPEHL 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G ++ + + FG Sbjct: 235 FFTTGSKELFEKISRKWFG 253 >gi|308174536|ref|YP_003921241.1| glutamate racemase [Bacillus amyloliquefaciens DSM 7] gi|307607400|emb|CBI43771.1| glutamate racemase [Bacillus amyloliquefaciens DSM 7] Length = 272 Score = 326 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + + Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + ++++ + +G + P + A T++ I ++ T Sbjct: 62 LENHHIKMLVIACNTATAIALEDIQRK-TDIPVVGVIQPGARTAIKVTKNQHIGVIGTIN 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + ++ +L VE + ++ + +E +G Sbjct: 121 TIKSRAYEQALLGLNADLQVENMACPLLVPFVESG----RFLQESAAEAVEASLEPLKGT 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ + V + + D AR +L +Q++ +H Sbjct: 177 AIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQ 236 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G+ + + FG Sbjct: 237 FLTTGERNGFAKIAEDWFG 255 >gi|150396728|ref|YP_001327195.1| glutamate racemase [Sinorhizobium medicae WSM419] gi|166231055|sp|A6U9N0|MURI_SINMW RecName: Full=Glutamate racemase gi|150028243|gb|ABR60360.1| glutamate racemase [Sinorhizobium medicae WSM419] Length = 271 Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 148/257 (57%), Positives = 192/257 (74%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF +L Sbjct: 7 KPILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGRLLA 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ P + +IACNTAFTL+ +LR +P M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 67 EHDPEICIIACNTAFTLVGADLRIVYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ SQCH+ LV S LA E Y G + +D ++ EI CF+E +GKRTD Sbjct: 127 RAYTRDLIQSFASQCHVRLVGSENLARMAEAYIRGEALTDDAVRAEIAPCFVEVDGKRTD 186 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F S Sbjct: 187 IVVLACTHYPFVANVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTS 246 Query: 254 GKPDIAMRRLMQGFGLK 270 GKPD A RRLMQGFGLK Sbjct: 247 GKPDFATRRLMQGFGLK 263 >gi|327481904|gb|AEA85214.1| glutamate racemase [Pseudomonas stutzeri DSM 4166] Length = 264 Score = 324 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 6/260 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + +FDSG+GGL VL+++R +P +Y+AD PYG +++R + Sbjct: 1 MSDCNAPVGVFDSGVGGLSVLREIRRRLPHESLLYLADSAHVPYGEKSPEYIRERCRIIA 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + +++ L V+ACNTA ELR +P + +G PA+K AAA T+SG++ +L+T Sbjct: 61 AFFVEQGAKAL-VLACNTATAAGVTELRELYPDLPIIGMEPAVKPAAAATRSGVVGVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL+ + L+ + + L R+E + + +EG Sbjct: 120 TGTLKSARFAALLDRFAGDVRVITQPCPGLVERIEAG----DLASANTRAMLEGWVGPLL 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 + D ++L CTHYP I + QL P V +D ++AR LL + + Sbjct: 176 AQGCDTLILGCTHYPFIRPLLAQLLPGDVRLIDTGAAVARHLHELLAERHLLSSGEASQ- 234 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 + SG P L +G Sbjct: 235 RFYCSGDPQRMAEVLPILWG 254 >gi|89098912|ref|ZP_01171792.1| glutamate racemase [Bacillus sp. NRRL B-14911] gi|89086316|gb|EAR65437.1| glutamate racemase [Bacillus sp. NRRL B-14911] Length = 266 Score = 324 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I I DSG+GGL V +++ +P + +Y+ D PYG +++ + + Sbjct: 1 MKQPIGIIDSGVGGLTVAKEVMRQLPNENIVYLGDTARCPYGPRTAEEVRRFTWQMTEFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + + VIACNTA ++ +E++ P + LG + P + A ++S I I+ T Sbjct: 61 LTQ-DIKMLVIACNTATAVVLEEIQEKLP-IPVLGVIYPGARAALKVSKSNKIGIIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + ++ VE G + KK + K Sbjct: 119 TVNSKAYEKALKQINRKVCVKPLACPKFVPLVESGEYGSAVA----KKIVAETLKPLRNK 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYPL+ + + + V + + + AR +L +Q+ H Sbjct: 175 DLDTLILGCTHYPLLEPLIKNIMGPGVKVISSGEETAREVSTILDYRGLLNQSADEPVHK 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I + Q Sbjct: 235 YFATGSISIFTKIAGQWL 252 >gi|325978965|ref|YP_004288681.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178893|emb|CBZ48937.1| Glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 269 Score = 324 bits (833), Expect = 7e-87, Method: Composition-based stats. Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + + V ACNTA + +E++ + LG + P A T++G Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I S Q ++ +S A VE ++ KK + Sbjct: 111 KIGVIGTPMTIKSGIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 +R DD HA + + + Sbjct: 226 SRTQDDVTHAFYTTASSQSFKEIAVNWL 253 >gi|288905998|ref|YP_003431220.1| glutamate racemase [Streptococcus gallolyticus UCN34] gi|306832017|ref|ZP_07465172.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288732724|emb|CBI14298.1| glutamate racemase [Streptococcus gallolyticus UCN34] gi|304425943|gb|EFM29060.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 269 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + + V ACNTA + +E++ + LG + P A T++G Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I S Q ++ +S A VE ++ KK + Sbjct: 111 KIGVIGTPMTIKSDIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 +R DD HA + + + Sbjct: 226 SRTQDDVTHAFYTTASSQSFKEIAVNWL 253 >gi|15965542|ref|NP_385895.1| glutamate racemase [Sinorhizobium meliloti 1021] gi|307302662|ref|ZP_07582418.1| glutamate racemase [Sinorhizobium meliloti BL225C] gi|307318509|ref|ZP_07597943.1| glutamate racemase [Sinorhizobium meliloti AK83] gi|20177981|sp|Q92PG8|MURI_RHIME RecName: Full=Glutamate racemase gi|15074723|emb|CAC46368.1| Probable glutamate racemase [Sinorhizobium meliloti 1021] gi|306895849|gb|EFN26601.1| glutamate racemase [Sinorhizobium meliloti AK83] gi|306903026|gb|EFN33617.1| glutamate racemase [Sinorhizobium meliloti BL225C] Length = 277 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 147/257 (57%), Positives = 192/257 (74%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF +L Sbjct: 7 KPILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGRLLA 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + P + +IACNTAFTL+ +LR+ +P M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 67 ELDPEICIIACNTAFTLVGADLRAAYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ SQCH+ LV S LA E Y G + ++ + EIE CF+E EGKRTD Sbjct: 127 RAYTRDLIQSFASQCHVRLVGSENLARMAEAYIRGDALADEAVLAEIEPCFVEAEGKRTD 186 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F S Sbjct: 187 IVVLACTHYPFMSNVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTS 246 Query: 254 GKPDIAMRRLMQGFGLK 270 G+PD A RRLMQGFGL+ Sbjct: 247 GRPDFATRRLMQGFGLR 263 >gi|153009326|ref|YP_001370541.1| glutamate racemase [Ochrobactrum anthropi ATCC 49188] gi|166231047|sp|A6X0F8|MURI_OCHA4 RecName: Full=Glutamate racemase gi|151561214|gb|ABS14712.1| glutamate racemase [Ochrobactrum anthropi ATCC 49188] Length = 278 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 140/275 (50%), Positives = 191/275 (69%), Gaps = 8/275 (2%) Query: 3 IDNYPCEK-------KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW 55 + N P + IL+FDSGIGGL VL++ R LMP+ F+YVADD GFPYG W Sbjct: 1 MKNAPAVSFSAMPSADAERPILVFDSGIGGLTVLREARVLMPDRRFVYVADDAGFPYGGW 60 Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115 E+ AL++R++ LF ++ Y P ++VIACNTA TL+ D+LR +PS+ F+G VPAIK AA Sbjct: 61 EEDALRERIVELFGKLIAAYDPEIAVIACNTASTLVLDDLRQAYPSVPFVGTVPAIKPAA 120 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 T SGL+S+L+TP T+RR YT +LI S+ +QCH+ LV + LA+ E + G +I E Sbjct: 121 ERTSSGLVSVLATPGTVRRAYTRDLIQSFATQCHVRLVGADQLATVAEAHIRGERIDEAL 180 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL- 234 + ++I CFIE++G RTD++VLACTHYP + +VFR+L+PWPVDWLD +++IARR LL Sbjct: 181 VVEQIAPCFIEQDGNRTDIVVLACTHYPFLANVFRRLAPWPVDWLDPAEAIARRTVSLLK 240 Query: 235 PRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGL 269 PR + +D A+ S PD A+RRLMQGFGL Sbjct: 241 PRRADEELHHHNDLAVVTSRNPDYAIRRLMQGFGL 275 >gi|330967413|gb|EGH67673.1| glutamate racemase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 275 Score = 323 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 5/257 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + +FDSG+GGL VL ++R +P +Y+AD PYG + +R + Sbjct: 9 PVNPGCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERCL- 67 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + +D + V+ACNTA +R +P +G PA+K AA T+SG++ +L Sbjct: 68 IIADFFHEQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T TL+ + L+ + S + L +E + +I++ ++ Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243 Query: 247 DHALFLSGKPDIAMRRL 263 + + S PD + L Sbjct: 244 ETVYWSSDIPDNFGKIL 260 >gi|328543188|ref|YP_004303297.1| glutamate racemase [polymorphum gilvum SL003B-26A1] gi|326412934|gb|ADZ69997.1| Glutamate racemase [Polymorphum gilvum SL003B-26A1] Length = 258 Score = 323 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 141/253 (55%), Positives = 186/253 (73%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSGIGGL VL++ R LMPE F+YVADD FPYG W++ L+ RL+ LF+++ D++ Sbjct: 2 LLFDSGIGGLTVLREARVLMPERSFVYVADDAAFPYGGWDEAPLRARLLALFAELFDRFD 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 PV+S++ACNTAFTL +LR+ FP F+G VPAIK AA T+SGL+S+L+TP T+RR Y Sbjct: 62 PVVSIVACNTAFTLAGADLRAAFPDRTFVGTVPAIKPAAERTRSGLVSVLATPGTVRRAY 121 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI S+ SQCH+ LV S LA E Y G + ++ + EI CF+EK+G RTD++V Sbjct: 122 TRELIQSFASQCHVRLVGSQNLAPMAEAYIRGEPLSDEAVGAEIADCFLEKDGARTDIVV 181 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 LACTHYP + +VFR+LSPWPVDWLD +++IAR+AR L+P + + R DHA+F SG P Sbjct: 182 LACTHYPFLANVFRRLSPWPVDWLDPAEAIARQARRLVPALAHLKDRTQTDHAVFTSGSP 241 Query: 257 DIAMRRLMQGFGL 269 D RRLMQGFGL Sbjct: 242 DFPTRRLMQGFGL 254 >gi|189425888|ref|YP_001953065.1| glutamate racemase [Geobacter lovleyi SZ] gi|189422147|gb|ACD96545.1| glutamate racemase [Geobacter lovleyi SZ] Length = 275 Score = 323 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 6/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ +P+ IY D PYG + + + S ++ Sbjct: 4 QAIGIFDSGVGGLTVLRELTKALPQEDTIYFGDTARVPYGTKSPDTVIRYSQEIASFLIK 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L V+ACNTA + LR + P P K+AA T+SG++ ++ T T+R Sbjct: 64 R-DIKLLVVACNTASAVALPTLRRSLPVPVVGVIEPGAKRAAEVTRSGVVGVIGTSGTIR 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + S I + + EE + + +E E + D Sbjct: 123 SSAYSRAIKRLNPDISVLAKPCPLFVPLAEEGWIDNDVTRITARLYLE----ELREAQVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFL 252 +VL CTHYPL+ V ++ V +D+++ AR +L + + +H ++ Sbjct: 179 TLVLGCTHYPLLKKVIAEVMGPDVTLVDSAEETARTVATILQEKSMLRPPAELGNHHYYV 238 Query: 253 SGKPDIAMRRLMQGFG 268 + P +R + G Sbjct: 239 TDVPAGFIRVGNRFLG 254 >gi|194017293|ref|ZP_03055905.1| glutamate racemase [Bacillus pumilus ATCC 7061] gi|194011161|gb|EDW20731.1| glutamate racemase [Bacillus pumilus ATCC 7061] Length = 271 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 7/260 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ IYV D PYG ++ + + + + Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYVGDTKRCPYGPRKEEEVLQYTWEMAHYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + + VIACNTA + DE++ T + +G + P + A T + I ++ T Sbjct: 61 LRHHHIKMLVIACNTATAIALDEIKGTL-DIPVIGVIQPGARTAIKVTNNQQIGVIGTAN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + + ++ +L VE + ++ +K +E + Sbjct: 120 TIKSEAYKEALLSLKAGLAVQSLACPLLVPFVESGTFLDQTADEVVKDSLE----PMKET 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 D ++L CTHYP++ ++ V + + D AR A +L T + H Sbjct: 176 GIDTLILGCTHYPILKESIQRFMGSDVSIISSGDETAREASTILSYKGLLNTSKEAPVHT 235 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + +G+ FG Sbjct: 236 FYTTGQQQNFENIARDWFGY 255 >gi|306834137|ref|ZP_07467257.1| glutamate racemase [Streptococcus bovis ATCC 700338] gi|304423710|gb|EFM26856.1| glutamate racemase [Streptococcus bovis ATCC 700338] Length = 269 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + + V ACNTA + + ++ + LG + P A T++G Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEAVKEKL-DIPVLGVILPGSSAAIKSTRNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I S Q ++ +S A VE ++ KK + Sbjct: 111 KIGVIGTPMTIKSDIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 +R DD HA + + + Sbjct: 226 SRTQDDVTHAFYTTASSQSFKEIAVNWL 253 >gi|237799730|ref|ZP_04588191.1| glutamate racemase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022585|gb|EGI02642.1| glutamate racemase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 271 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IFDSG+GGL VL ++R +P +YVAD PYG + +R + + Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQSLPNESLLYVADCGHIPYGEKTPEFIIERCLTIAGFFR 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL Sbjct: 71 EQGAKAL-VVACNTATAAGVAHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L +E + +I++ ++ + Sbjct: 130 QSARFAALLDRFASDVRVVTQPCPGLVELIETG----DLISPQIRQLLQHYVKPLLAAQC 185 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTHYP + + R++ P V +D ++AR+ + LL R + D + Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPARDTLYWS 245 Query: 253 SGKPDIAMRRL 263 SG PD + L Sbjct: 246 SGIPDNFRKIL 256 >gi|328946845|gb|EGG40982.1| glutamate racemase [Streptococcus sanguinis SK1087] Length = 264 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R + +H + + GLK Sbjct: 226 SREKEELNHQFYTTANAKSFSEIAESWLGLK 256 >gi|323351014|ref|ZP_08086671.1| glutamate racemase [Streptococcus sanguinis VMC66] gi|322122738|gb|EFX94447.1| glutamate racemase [Streptococcus sanguinis VMC66] Length = 264 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 109/271 (40%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 171 PL-----AGQVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R +H + + GLK Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256 >gi|330873304|gb|EGH07453.1| glutamate racemase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 275 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 5/257 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + +FDSG+GGL VL ++R +P+ +Y+AD PYG + +R + Sbjct: 9 PVLQNCDAPVGVFDSGVGGLSVLNEIRQTLPKESLLYLADCGHIPYGEKTPEFIIERCL- 67 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + +D + V+ACNTA +R +P +G PA+K AA T+SG++ +L Sbjct: 68 IIADFFHEQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T TL+ + L+ + S + L +E + +I++ ++ Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243 Query: 247 DHALFLSGKPDIAMRRL 263 D + S PD + L Sbjct: 244 DTVYWSSDIPDNFGKIL 260 >gi|324993660|gb|EGC25579.1| glutamate racemase [Streptococcus sanguinis SK405] gi|324995028|gb|EGC26941.1| glutamate racemase [Streptococcus sanguinis SK678] gi|327462929|gb|EGF09250.1| glutamate racemase [Streptococcus sanguinis SK1] gi|327474533|gb|EGF19938.1| glutamate racemase [Streptococcus sanguinis SK408] gi|332359127|gb|EGJ36948.1| glutamate racemase [Streptococcus sanguinis SK49] gi|332362249|gb|EGJ40049.1| glutamate racemase [Streptococcus sanguinis SK1056] Length = 264 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R +H + + GLK Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256 >gi|324991303|gb|EGC23236.1| glutamate racemase [Streptococcus sanguinis SK353] gi|325687120|gb|EGD29143.1| glutamate racemase [Streptococcus sanguinis SK72] Length = 264 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R +H + + GLK Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256 >gi|213967221|ref|ZP_03395370.1| glutamate racemase [Pseudomonas syringae pv. tomato T1] gi|301381043|ref|ZP_07229461.1| glutamate racemase [Pseudomonas syringae pv. tomato Max13] gi|302060375|ref|ZP_07251916.1| glutamate racemase [Pseudomonas syringae pv. tomato K40] gi|302134865|ref|ZP_07260855.1| glutamate racemase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928063|gb|EEB61609.1| glutamate racemase [Pseudomonas syringae pv. tomato T1] Length = 275 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 5/257 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + +FDSG+GGL VL ++R +P +Y+AD PYG + +R + Sbjct: 9 PVLQNCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERCL- 67 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + +D V+ACNTA +R +P +G PA+K AA T+SG++ +L Sbjct: 68 IIADFFHGQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T TL+ + L+ + S + L +E + +I++ ++ Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPASVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243 Query: 247 DHALFLSGKPDIAMRRL 263 D + S PD + L Sbjct: 244 DTVYWSSDIPDNFGKIL 260 >gi|149183306|ref|ZP_01861747.1| glutamate racemase [Bacillus sp. SG-1] gi|148848999|gb|EDL63208.1| glutamate racemase [Bacillus sp. SG-1] Length = 266 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 8/261 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I I DSG+GGL V +++ +P Y+ D PYG +KK + + + Sbjct: 1 MDQPIGIIDSGVGGLTVAKEVMRQLPNETIFYLGDTARCPYGPRTAEEVKKFTWEMAAFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + Y + VIACNTA ++ +EL+ P + +G + P + A ++Q+G I +L T Sbjct: 61 M-NYNIKMLVIACNTATAVVLEELQDMLP-IPVVGVIQPGARAALKHSQNGRIGVLGTVG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ IHS + ++ VE K D + + + + Sbjct: 119 TVNSKAYDKAIHSINDSIDVTSLACPKFVPLVESGEYESKWAVDIVNET----LVHMREE 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249 D ++L CTHYPL+ + + + V +++ D AR +L + H Sbjct: 175 PIDTLILGCTHYPLLQPIVQTVMGQEVKVINSGDETAREVSAILDYQGMLNKKKAKPQHI 234 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G I + + LK Sbjct: 235 FFTTGSKRIFSKIALDWLQLK 255 >gi|157693253|ref|YP_001487715.1| glutamate racemase [Bacillus pumilus SAFR-032] gi|167017314|sp|A8FFY8|MURI_BACP2 RecName: Full=Glutamate racemase gi|157682011|gb|ABV63155.1| glutamate racemase [Bacillus pumilus SAFR-032] Length = 272 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 7/260 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L I + DSG+GGL V +++ +P+ IYV D PYG ++ + + + + Sbjct: 2 LDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYVGDTKRCPYGPRKEEEVLQYTWEMAHYL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + + VIACNTA + DE+++T + +G + P + A T + I ++ T Sbjct: 62 LRHHHIKMLVIACNTATAIALDEIKATL-DIPVIGVIQPGARTAIKVTNNQQIGVIGTAN 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + + ++ +L VE + ++ +K +E + Sbjct: 121 TIKSEAYKEALLSLKAGLAVQSLACPLLVPFVESGTFLDQTADEVVKDSLE----PMKET 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 D ++L CTHYP++ ++ V + + D AR A +L T + H Sbjct: 177 GIDTLILGCTHYPILKESIQRFMGSDVSIISSGDETAREASTILSYKGLLNTSQEAPVHT 236 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + +G+ FG Sbjct: 237 FYTTGQQQNFENIARDWFGY 256 >gi|325293269|ref|YP_004279133.1| Glutamate racemase [Agrobacterium sp. H13-3] gi|325061122|gb|ADY64813.1| Glutamate racemase [Agrobacterium sp. H13-3] Length = 273 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 145/257 (56%), Positives = 187/257 (72%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK R++ LF +L+ Sbjct: 13 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEEALKARILSLFEKLLE 72 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Y P + +IACNTAFTL +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 73 DYSPEVCIIACNTAFTLAGADLRARFPDMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 132 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ +QCH+ LV S LA E + G I ++ + EIE CFI+ +GKRTD Sbjct: 133 RAYTRDLIQSFATQCHVRLVGSENLARMAESWIRGEPISDEAVLAEIEPCFIDSDGKRTD 192 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P + D A+F S Sbjct: 193 IVVLACTHYPFMANVFRRLAPWPVDWLDPAEAIARRARHLVPLPQDAEHPDGFDFAVFTS 252 Query: 254 GKPDIAMRRLMQGFGLK 270 GKPD A RRLMQGFGL Sbjct: 253 GKPDFATRRLMQGFGLS 269 >gi|118579835|ref|YP_901085.1| glutamate racemase [Pelobacter propionicus DSM 2379] gi|118502545|gb|ABK99027.1| glutamate racemase [Pelobacter propionicus DSM 2379] Length = 272 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 6/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 SI IFDSG+GGL VL+++ MP+ IY D PYG + + + S ++ Sbjct: 4 RSIGIFDSGVGGLTVLREIIKAMPQEDTIYFGDTARVPYGTKSPETVIRYAHEITSFLVR 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L V+ACNT + + L+ FP P K+A ++SG I ++ T T++ Sbjct: 64 R-DIKLLVVACNTVSAVALNGLKRHFPIPVVGVIEPGAKRAVEVSRSGRIGVIGTAGTIK 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + S I +Q + + + EE ++ + + + + D Sbjct: 123 SSAYSRAIKRLNAQAEVLTRACPLFVPLAEEGWIDNQVA----RLTAQSYLQDLKEAGVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFL 252 +VL CTHYPL+ + + V +D+++ AR +L R + +H F+ Sbjct: 179 TLVLGCTHYPLLKPLICETMGPDVTLVDSAEETARSVAEILSRKKLLRPPSEKGNHHYFV 238 Query: 253 SGKPDIAMRRLMQGFG 268 S P +R + G Sbjct: 239 SDVPAAFIRVGNRFLG 254 >gi|332358334|gb|EGJ36160.1| glutamate racemase [Streptococcus sanguinis SK355] Length = 264 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE ++ KK + Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESN----ELHSSLTKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 G R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 167 ETLQPLVG-RVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R +H + + GLK Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256 >gi|325695051|gb|EGD36954.1| glutamate racemase [Streptococcus sanguinis SK150] gi|325696351|gb|EGD38242.1| glutamate racemase [Streptococcus sanguinis SK160] Length = 264 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRS 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMKVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R +H + + GLK Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256 >gi|311069331|ref|YP_003974254.1| glutamate racemase [Bacillus atrophaeus 1942] gi|310869848|gb|ADP33323.1| glutamate racemase [Bacillus atrophaeus 1942] Length = 271 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIIRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTRELTQYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + + VIACNTA + D ++ + +G + P + A T++ I ++ T Sbjct: 61 LNSHHIKMLVIACNTATAIALDAIKREV-DIPVVGVIQPGARTAIKVTKNQTIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + ++ + ++ +L VE K + + +E + Sbjct: 120 TIKSGAYEEALVALNTELKVENLACPLLVPFVESG----KFLDKTADEIVETSLHPLKNT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ ++ V + + D AR +L +Q+ +H Sbjct: 176 TIDTLILGCTHYPILKDAIQRYMGEHVKIISSGDETAREVSTILSYKGLLNQSPFAAEHQ 235 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G+ + FG Sbjct: 236 FLTTGERSRFAKIADDWFG 254 >gi|28868327|ref|NP_790946.1| glutamate racemase [Pseudomonas syringae pv. tomato str. DC3000] gi|38257978|sp|Q888B8|MURI_PSESM RecName: Full=Glutamate racemase gi|28851564|gb|AAO54641.1| glutamate racemase [Pseudomonas syringae pv. tomato str. DC3000] gi|331018119|gb|EGH98175.1| glutamate racemase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 275 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 5/257 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + +FDSG+GGL VL ++R +P +Y+AD PYG + +R + Sbjct: 9 PVNPGCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERCL- 67 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + +D V+ACNTA +R +P +G PA+K AA T+SG++ +L Sbjct: 68 IIADFFHGQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T TL+ + L+ + S + L +E + +I++ ++ Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPASVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243 Query: 247 DHALFLSGKPDIAMRRL 263 D + S PD + L Sbjct: 244 DTLYWSSDIPDNFGKIL 260 >gi|328956948|ref|YP_004374334.1| glutamate racemase [Carnobacterium sp. 17-4] gi|328673272|gb|AEB29318.1| glutamate racemase [Carnobacterium sp. 17-4] Length = 272 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 10/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I DSG+GGL V+++ +P YV D PYG + + + + +L Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEEQILQFTWEMTHFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 +K + VIACNTA + ++L+ ++ +G + P + A T++ I I+ T T Sbjct: 63 NK-DIKMLVIACNTATAVALEDLKKKL-AIPIIGVILPGSRAAIKATKNNRIGIIGTEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +I S + + ++ VE I KK + + K Sbjct: 121 IKSDKYRKMIRSKDTLASVESLACPKFVPLVESNEYDSAIA----KKIVTETLKPIKNKN 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDH 248 D +VL CTHYPL+ + + V +D+ +L N + + + Sbjct: 177 IDTLVLGCTHYPLLRPIIQNFMGDSVTLIDSGAETISEVSTILDYFNLAELSKNKEVSER 236 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 + +G + Q G Sbjct: 237 KFYTTGSTHMFNDIASQWLG 256 >gi|327470419|gb|EGF15875.1| glutamate racemase [Streptococcus sanguinis SK330] Length = 264 Score = 321 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVDSLACPKFVPLVESNELHSSLTKKVVYETLQ 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R +H + + GLK Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256 >gi|327490090|gb|EGF21878.1| glutamate racemase [Streptococcus sanguinis SK1058] gi|332367402|gb|EGJ45135.1| glutamate racemase [Streptococcus sanguinis SK1059] Length = 264 Score = 321 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTVSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R +H + + GLK Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256 >gi|311031420|ref|ZP_07709510.1| glutamate racemase [Bacillus sp. m3-13] Length = 269 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 114/258 (44%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q I + DSG+GGL V +++ +P+ IY+ D PYG ++ + + Sbjct: 1 MQRPIGVIDSGVGGLTVAKEIMRQLPKERIIYLGDTARCPYGPRPVDEVRLYTWEMTRYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + + VIACNTA ++ DE+R + +G V P + A T + + ++ T Sbjct: 61 LT-HDIKMLVIACNTATAVVLDEIREQL-DIPVIGVVDPGARTALKVTSNYQVGVIGTVG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ +N + S ++ + ++ VE + + + K+ +E +G Sbjct: 119 TINSGAYANALKSINNEVKVESLACPNFVPLVESG----EFEGERAKEIVEDTLHLFKGS 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 + D ++L CTHYPL+ + + + + + D AR +L + ++H Sbjct: 175 KIDTLILGCTHYPLLTPTIQAVMGDGIQLISSGDETAREVSTILNFKKLLNKKQRTENHQ 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 + +G ++ + + F Sbjct: 235 FYTTGSKELFEKIASKLF 252 >gi|146283506|ref|YP_001173659.1| glutamate racemase [Pseudomonas stutzeri A1501] gi|167017320|sp|A4VPB6|MURI_PSEU5 RecName: Full=Glutamate racemase gi|145571711|gb|ABP80817.1| glutamate racemase [Pseudomonas stutzeri A1501] Length = 264 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 69/258 (26%), Positives = 122/258 (47%), Gaps = 6/258 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL VL+++R +P +Y+AD PYG +++R + + ++ Sbjct: 6 APVGVFDSGVGGLSVLREIRQRLPHESLLYLADSAHVPYGEKSPEYIRERCRVIAAFFVE 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K L V+ACNTA ELR +P + + PA+K AA T+SG++ +L+T TL+ Sbjct: 66 KGAKAL-VVACNTATAAGVTELRELYPQLPIIAMEPAVKPAALATRSGVVGVLATTGTLK 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ + + + L R+E ++ + + + G + D Sbjct: 125 SAKFAALLDRFAADVRVITQPCPGLVERIEAG----DLESADTRAMLMGWVEPMLAQGCD 180 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L CTHYP I + +QL P + +D ++AR R +L + + + S Sbjct: 181 TLILGCTHYPFIRPLLQQLLPNDIRLIDTGAAVARHLREMLAERHLLASGDA-TQRFYCS 239 Query: 254 GKPDIAMRRLMQGFGLKS 271 G P R L +G + Sbjct: 240 GDPQRMARVLPILWGENA 257 >gi|330961731|gb|EGH61991.1| glutamate racemase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 271 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +FDSG+GGL VL ++R L+P +Y+AD PYG + +R + + Sbjct: 11 DAPVGVFDSGVGGLSVLNEIRQLLPNESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFH 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL Sbjct: 71 EQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L +E + +I+ + R Sbjct: 130 QSARFAALLDRFASDVRVVTQPCPGLVELIESG----DLVSPQIRALLSRYVEPLLAARC 185 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + R++ P V +D ++AR+ + LL R + + + Sbjct: 186 DTVILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPARETVYWS 245 Query: 253 SGKPDIAMRRL 263 S PD + L Sbjct: 246 SDIPDNFGKIL 256 >gi|319651762|ref|ZP_08005888.1| glutamate racemase [Bacillus sp. 2_A_57_CT2] gi|317396581|gb|EFV77293.1| glutamate racemase [Bacillus sp. 2_A_57_CT2] Length = 264 Score = 321 bits (823), Expect = 9e-86, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I I DSG+GGL V +++ +P +Y+ D PYG +K + + Sbjct: 1 MKQPIGIIDSGVGGLTVAKEIMRQLPNEDIVYLGDTARCPYGPRPGDEVKSFTWQMTKYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L++ + +IACNTA + +E+R ++ +G + P + A T++ I ++ T Sbjct: 61 LER-NIKMLIIACNTATAVALEEIRREL-TIPVIGVIFPGARTAIKVTKNHKIGVIGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R N + + +H ++ VE + KK + +GK Sbjct: 119 TVRSKAYENALIQLNRRSDVHSLACPKFVPLVESGEYEGSVA----KKIVAETLQPIKGK 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYPL+ + + + V+ + + + AR A +L ++ Sbjct: 175 GMDTLILGCTHYPLLEPIIKNVMGKGVNVISSGEETAREASTILHHYGMLKAVAENPEYK 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G I + G Sbjct: 235 FCTTGSTAIFSKIASTWLG 253 >gi|327462020|gb|EGF08349.1| glutamate racemase [Streptococcus sanguinis SK1057] Length = 264 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVDSLACPKFVPLVESNELHSSLTKKVVYETLQ 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R +H + + + GLK Sbjct: 226 SREKQEINHQFYTTANANSFSEIAESWLGLK 256 >gi|15889167|ref|NP_354848.1| glutamate racemase [Agrobacterium tumefaciens str. C58] gi|22001824|sp|Q8UE93|MURI_AGRT5 RecName: Full=Glutamate racemase gi|15156983|gb|AAK87633.1| glutamate racemase [Agrobacterium tumefaciens str. C58] Length = 273 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 144/257 (56%), Positives = 186/257 (72%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK R++ LF +L Sbjct: 13 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEEALKTRILSLFETLLQ 72 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Y P + +IACNTAFTL +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 73 DYSPEVCIIACNTAFTLAGADLRARFPDMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 132 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ +QCH+ LV S LA E + G + ++ + EIE CFI+ +GKRTD Sbjct: 133 RAYTRDLIQSFATQCHVRLVGSENLARMAESWIRGEPVSDEAVLAEIEPCFIDSDGKRTD 192 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P + D A+F S Sbjct: 193 IVVLACTHYPFMANVFRRLAPWPVDWLDPAEAIARRARHLVPLPQDAEHPDGFDFAVFTS 252 Query: 254 GKPDIAMRRLMQGFGLK 270 GKPD A RRLMQGFGL Sbjct: 253 GKPDFATRRLMQGFGLS 269 >gi|239832083|ref|ZP_04680412.1| glutamate racemase [Ochrobactrum intermedium LMG 3301] gi|239824350|gb|EEQ95918.1| glutamate racemase [Ochrobactrum intermedium LMG 3301] Length = 278 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 139/260 (53%), Positives = 187/260 (71%), Gaps = 1/260 (0%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + IL+FDSGIGGL VL++ R LMP+ F+YVADD GFPYG WE+ AL+ R++ LF Sbjct: 16 DAERPILVFDSGIGGLTVLREARVLMPDRRFVYVADDAGFPYGGWEEDALRARIVQLFGK 75 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ Y P ++VIACNTA TL+ D+LR+ +P++ F+G VPAIK AA T SGL+S+L+TP Sbjct: 76 LIADYDPEIAVIACNTASTLVLDDLRNAYPAVPFVGTVPAIKPAAERTSSGLVSVLATPG 135 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+RR YT +LI S+ SQCH+ LV + LA+ E + G KI E + +I CFIE++G Sbjct: 136 TVRRAYTRDLIQSFASQCHVRLVGADQLAAVAEAHIRGEKIDEALVVAQIAPCFIEQDGN 195 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHA 249 RTD++VLACTHYP + +VFR+L+PWPVDWLD +++IARR LL PR + +D A Sbjct: 196 RTDIVVLACTHYPFLANVFRRLAPWPVDWLDPAEAIARRTVSLLKPRRAVEELHHHNDLA 255 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + S PD A+RRLMQGFGL Sbjct: 256 VVTSQNPDYAIRRLMQGFGL 275 >gi|312903654|ref|ZP_07762830.1| glutamate racemase [Enterococcus faecalis TX0635] gi|310633007|gb|EFQ16290.1| glutamate racemase [Enterococcus faecalis TX0635] Length = 275 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 16/273 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG + Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + +L K + VIACNTA + +E+++ P + +G + P + A T+ Sbjct: 54 IQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I ++ T T++ I S + ++ VE + KK Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKI 167 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + K D ++L CTHYPL+ V + + V +D+ LL + Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227 Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 T H + +G + G++ Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260 >gi|229918347|ref|YP_002886993.1| glutamate racemase [Exiguobacterium sp. AT1b] gi|229469776|gb|ACQ71548.1| glutamate racemase [Exiguobacterium sp. AT1b] Length = 272 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 111/260 (42%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 +++ +I + DSG+GGL V++++ +P+ +Y+ D PYG ++ L Sbjct: 5 QMKRAIGVLDSGVGGLTVVKELMRQLPKEEIVYIGDTERCPYGPRPHDEIEAYTWELIEF 64 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +L K + VIACNTA ++ E R + +G + P + A T++ I ++ T Sbjct: 65 LLKK-DVKMIVIACNTATAVVLKEARKRL-DIPVIGVIDPGARAAVKGTRNKHIGVIGTK 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ + + ++ ++ VE ++ + +++ +E + Sbjct: 123 MTIESGSYEKALRHVAGEVDVYSLACPPFVPLVEAG----EVSGERVRQVVEETLRPLQP 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248 D ++L CTHYPL+ V + + V + + D A +L +H Sbjct: 179 SEMDTLILGCTHYPLLAPVIQDVVGPDVHLISSGDETALEVAAMLDYQELENGLDAVPEH 238 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 A + +G ++ R + G Sbjct: 239 AFYATGDIELFDRLASEWLG 258 >gi|315144634|gb|EFT88650.1| glutamate racemase [Enterococcus faecalis TX2141] gi|315160935|gb|EFU04952.1| glutamate racemase [Enterococcus faecalis TX0645] Length = 275 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 16/273 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG + Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + +L K + VIACNTA + +E+++ P + +G + P + A T+ Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I ++ T T++ I S + ++ VE + KK Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKI 167 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + K D ++L CTHYPL+ V + + V +D+ LL + Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227 Query: 240 HQTRVFDD--HALFLSGKPDIAMRRLMQGFGLK 270 T H + +G + G++ Sbjct: 228 AHTPEAPKQTHEFYTTGSAKMFEEIASSWLGIE 260 >gi|171780258|ref|ZP_02921162.1| hypothetical protein STRINF_02046 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281606|gb|EDT47041.1| hypothetical protein STRINF_02046 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 269 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 18/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + V ACNTA + E++ + LG + P A T++G Sbjct: 53 YTWELVNFLLTK-NVKMIVFACNTATAVAWKEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I I+ TP T+ I S + + ++ VE G + KK + Sbjct: 111 KIGIIGTPMTINSEVYPEKIKSLSPKMEVSGLACSKFVPIVESNEMGSSVA----KKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 167 ESLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINH 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFG 268 +R + DH + + + G Sbjct: 226 SRTENAVDHHFYTTASSQRFKEIAVNWLG 254 >gi|289678403|ref|ZP_06499293.1| glutamate racemase [Pseudomonas syringae pv. syringae FF5] gi|330900878|gb|EGH32297.1| glutamate racemase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 271 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL Sbjct: 71 EQGAKAL-VVACNTATAAGVSHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +I++ ++ R Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLQHYVEPLLAARC 185 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D + Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVSRDTVYWS 245 Query: 253 SGKPDIAMRRL 263 S PD + L Sbjct: 246 SDIPDNFRKIL 256 >gi|262283242|ref|ZP_06061009.1| glutamate racemase [Streptococcus sp. 2_1_36FAA] gi|262261494|gb|EEY80193.1| glutamate racemase [Streptococcus sp. 2_1_36FAA] Length = 264 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 108/269 (40%), Gaps = 18/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRD 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKSTHSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE ++ KK + Sbjct: 111 KIGVIGTPMTVTSDIYRKKIEALSPEMEVSSLACPKFVPLVESN----ELTSSVTKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLLPLAGK-VDTLVLGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFG 268 +R H + + G Sbjct: 226 SREEQTLQHRFYTTASAKSFAEIAEHWLG 254 >gi|228923236|ref|ZP_04086526.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836442|gb|EEM81793.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 269 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK D+ + FG Sbjct: 236 LFLTTGKIDLFKEIASKWFG 255 >gi|330975580|gb|EGH75646.1| glutamate racemase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 271 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL Sbjct: 71 EQGAKAL-VVACNTATAAGVSHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +I++ ++ R Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLQHYVEPLLAARC 185 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D + Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVSRDTVYWS 245 Query: 253 SGKPDIAMRRL 263 S PD + L Sbjct: 246 SDIPDNFRKIL 256 >gi|325690950|gb|EGD32950.1| glutamate racemase [Streptococcus sanguinis SK115] Length = 264 Score = 319 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 109/271 (40%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNMMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R +H + + LK Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLDLK 256 >gi|229546200|ref|ZP_04434925.1| glutamate racemase [Enterococcus faecalis TX1322] gi|229550385|ref|ZP_04439110.1| glutamate racemase [Enterococcus faecalis ATCC 29200] gi|255973156|ref|ZP_05423742.1| glutamate racemase [Enterococcus faecalis T1] gi|255976199|ref|ZP_05426785.1| glutamate racemase [Enterococcus faecalis T2] gi|256618705|ref|ZP_05475551.1| glutamate racemase [Enterococcus faecalis ATCC 4200] gi|256762129|ref|ZP_05502709.1| glutamate racemase [Enterococcus faecalis T3] gi|256852771|ref|ZP_05558141.1| glutamate racemase [Enterococcus faecalis T8] gi|256958618|ref|ZP_05562789.1| glutamate racemase [Enterococcus faecalis DS5] gi|256965478|ref|ZP_05569649.1| glutamate racemase [Enterococcus faecalis HIP11704] gi|257078028|ref|ZP_05572389.1| glutamate racemase [Enterococcus faecalis JH1] gi|257082916|ref|ZP_05577277.1| glutamate racemase [Enterococcus faecalis E1Sol] gi|257085618|ref|ZP_05579979.1| glutamate racemase [Enterococcus faecalis Fly1] gi|257089533|ref|ZP_05583894.1| glutamate racemase [Enterococcus faecalis CH188] gi|257422962|ref|ZP_05599952.1| glutamate racemase [Enterococcus faecalis X98] gi|307268765|ref|ZP_07550133.1| glutamate racemase [Enterococcus faecalis TX4248] gi|307273812|ref|ZP_07555034.1| glutamate racemase [Enterococcus faecalis TX0855] gi|307274577|ref|ZP_07555757.1| glutamate racemase [Enterococcus faecalis TX2134] gi|307278843|ref|ZP_07559906.1| glutamate racemase [Enterococcus faecalis TX0860] gi|307288574|ref|ZP_07568558.1| glutamate racemase [Enterococcus faecalis TX0109] gi|307291104|ref|ZP_07570989.1| glutamate racemase [Enterococcus faecalis TX0411] gi|312899596|ref|ZP_07758922.1| glutamate racemase [Enterococcus faecalis TX0470] gi|312951373|ref|ZP_07770271.1| glutamate racemase [Enterococcus faecalis TX0102] gi|229304507|gb|EEN70503.1| glutamate racemase [Enterococcus faecalis ATCC 29200] gi|229308724|gb|EEN74711.1| glutamate racemase [Enterococcus faecalis TX1322] gi|255964174|gb|EET96650.1| glutamate racemase [Enterococcus faecalis T1] gi|255969071|gb|EET99693.1| glutamate racemase [Enterococcus faecalis T2] gi|256598232|gb|EEU17408.1| glutamate racemase [Enterococcus faecalis ATCC 4200] gi|256683380|gb|EEU23075.1| glutamate racemase [Enterococcus faecalis T3] gi|256711230|gb|EEU26268.1| glutamate racemase [Enterococcus faecalis T8] gi|256949114|gb|EEU65746.1| glutamate racemase [Enterococcus faecalis DS5] gi|256955974|gb|EEU72606.1| glutamate racemase [Enterococcus faecalis HIP11704] gi|256986058|gb|EEU73360.1| glutamate racemase [Enterococcus faecalis JH1] gi|256990946|gb|EEU78248.1| glutamate racemase [Enterococcus faecalis E1Sol] gi|256993648|gb|EEU80950.1| glutamate racemase [Enterococcus faecalis Fly1] gi|256998345|gb|EEU84865.1| glutamate racemase [Enterococcus faecalis CH188] gi|257164786|gb|EEU94746.1| glutamate racemase [Enterococcus faecalis X98] gi|306497758|gb|EFM67290.1| glutamate racemase [Enterococcus faecalis TX0411] gi|306500481|gb|EFM69814.1| glutamate racemase [Enterococcus faecalis TX0109] gi|306504514|gb|EFM73721.1| glutamate racemase [Enterococcus faecalis TX0860] gi|306508729|gb|EFM77819.1| glutamate racemase [Enterococcus faecalis TX2134] gi|306509497|gb|EFM78545.1| glutamate racemase [Enterococcus faecalis TX0855] gi|306514893|gb|EFM83440.1| glutamate racemase [Enterococcus faecalis TX4248] gi|310630633|gb|EFQ13916.1| glutamate racemase [Enterococcus faecalis TX0102] gi|311293275|gb|EFQ71831.1| glutamate racemase [Enterococcus faecalis TX0470] gi|315030713|gb|EFT42645.1| glutamate racemase [Enterococcus faecalis TX4000] gi|315031599|gb|EFT43531.1| glutamate racemase [Enterococcus faecalis TX0017] gi|315034959|gb|EFT46891.1| glutamate racemase [Enterococcus faecalis TX0027] gi|315148458|gb|EFT92474.1| glutamate racemase [Enterococcus faecalis TX4244] gi|315153644|gb|EFT97660.1| glutamate racemase [Enterococcus faecalis TX0031] gi|315156538|gb|EFU00555.1| glutamate racemase [Enterococcus faecalis TX0043] gi|315158364|gb|EFU02381.1| glutamate racemase [Enterococcus faecalis TX0312] gi|315165532|gb|EFU09549.1| glutamate racemase [Enterococcus faecalis TX1302] gi|315168389|gb|EFU12406.1| glutamate racemase [Enterococcus faecalis TX1341] gi|315170972|gb|EFU14989.1| glutamate racemase [Enterococcus faecalis TX1342] gi|315174640|gb|EFU18657.1| glutamate racemase [Enterococcus faecalis TX1346] gi|315577482|gb|EFU89673.1| glutamate racemase [Enterococcus faecalis TX0630] gi|329576388|gb|EGG57901.1| glutamate racemase [Enterococcus faecalis TX1467] Length = 275 Score = 319 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 16/273 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG + Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + +L K + VIACNTA + +E+++ P + +G + P + A T+ Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I ++ T T++ I S + ++ VE + KK Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKI 167 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + K D ++L CTHYPL+ V + + V +D+ LL + Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227 Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 T H + +G + G++ Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260 >gi|257415735|ref|ZP_05592729.1| glutamate racemase [Enterococcus faecalis AR01/DG] gi|257157563|gb|EEU87523.1| glutamate racemase [Enterococcus faecalis ARO1/DG] Length = 275 Score = 319 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 16/273 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG + Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + +L K + VIACNTA + +E+++ P + +G + P + A T+ Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I ++ T T++ I S + ++ VE + KK Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKI 167 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + K D ++L CTHYPL+ V + + V +D+ LL + Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227 Query: 240 HQTRVFDD--HALFLSGKPDIAMRRLMQGFGLK 270 T H + +G + G++ Sbjct: 228 AHTPEVPKQTHEFYTTGSAKMFEEIASSWLGIE 260 >gi|157151279|ref|YP_001450953.1| glutamate racemase [Streptococcus gordonii str. Challis substr. CH1] gi|189030375|sp|A8AYU3|MURI_STRGC RecName: Full=Glutamate racemase gi|157076073|gb|ABV10756.1| glutamate racemase [Streptococcus gordonii str. Challis substr. CH1] Length = 264 Score = 319 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 108/269 (40%), Gaps = 18/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRD 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKSTHSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE ++ KK + Sbjct: 111 KIGVIGTPMTVTSDIYRKKIEALSPEMEVSSLACPKFVPLVESN----ELTSSVTKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLLPLAGK-VDTLVLGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268 +R H + + G Sbjct: 226 SREEQTLRHRFYTTASAKSFAEIAEHWLG 254 >gi|256962283|ref|ZP_05566454.1| glutamate racemase [Enterococcus faecalis Merz96] gi|257086476|ref|ZP_05580837.1| glutamate racemase [Enterococcus faecalis D6] gi|257418950|ref|ZP_05595944.1| glutamate racemase [Enterococcus faecalis T11] gi|293383312|ref|ZP_06629227.1| glutamate racemase [Enterococcus faecalis R712] gi|293387531|ref|ZP_06632080.1| glutamate racemase [Enterococcus faecalis S613] gi|312905819|ref|ZP_07764839.1| glutamate racemase [Enterococcus faecalis DAPTO 512] gi|312909126|ref|ZP_07767985.1| glutamate racemase [Enterococcus faecalis DAPTO 516] gi|256952779|gb|EEU69411.1| glutamate racemase [Enterococcus faecalis Merz96] gi|256994506|gb|EEU81808.1| glutamate racemase [Enterococcus faecalis D6] gi|257160778|gb|EEU90738.1| glutamate racemase [Enterococcus faecalis T11] gi|291079335|gb|EFE16699.1| glutamate racemase [Enterococcus faecalis R712] gi|291083041|gb|EFE20004.1| glutamate racemase [Enterococcus faecalis S613] gi|310628158|gb|EFQ11441.1| glutamate racemase [Enterococcus faecalis DAPTO 512] gi|311290550|gb|EFQ69106.1| glutamate racemase [Enterococcus faecalis DAPTO 516] gi|315028078|gb|EFT40010.1| glutamate racemase [Enterococcus faecalis TX2137] gi|315150399|gb|EFT94415.1| glutamate racemase [Enterococcus faecalis TX0012] gi|327534752|gb|AEA93586.1| glutamate racemase [Enterococcus faecalis OG1RF] Length = 275 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 16/273 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG + Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + +L K + VIACNTA + +E+++ P + +G + P + A T+ Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I ++ T T++ I S + ++ VE + KK Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLACPKFVPIVESNQYRSSVA----KKI 167 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + K D ++L CTHYPL+ V + + V +D+ LL + Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227 Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 T H + +G + G++ Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260 >gi|302024339|ref|ZP_07249550.1| glutamate racemase [Streptococcus suis 05HAS68] gi|330833329|ref|YP_004402154.1| glutamate racemase [Streptococcus suis ST3] gi|329307552|gb|AEB81968.1| glutamate racemase [Streptococcus suis ST3] Length = 264 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 18/270 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V +++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + V ACNTA + +E++ + LG + P A TQ+G Sbjct: 53 YTWQLVNFLLTK-NVKMIVFACNTATAVAWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T++ I + + + ++ A VE + + + + + + Sbjct: 111 KVGVLGTAMTIQSDIYRQKIQALSPETQVDSLACPKFAPLVESNSHQSSLAKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + + V +D+ AR LL ++ Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFGL 269 +R D H + + P G+ Sbjct: 226 SRTEKDIQHRFYTTASPAAFKEIAESWMGI 255 >gi|66044205|ref|YP_234046.1| glutamate racemase [Pseudomonas syringae pv. syringae B728a] gi|63254912|gb|AAY36008.1| Glutamate racemase [Pseudomonas syringae pv. syringae B728a] gi|330972817|gb|EGH72883.1| glutamate racemase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 271 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL Sbjct: 71 EQGAKAL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +I++ ++ R Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARC 185 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D + Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLTRSGLLASGVARDTVYWS 245 Query: 253 SGKPDIAMRRL 263 S PD + L Sbjct: 246 SDIPDNFRKIL 256 >gi|229158101|ref|ZP_04286171.1| Glutamate racemase [Bacillus cereus ATCC 4342] gi|229198612|ref|ZP_04325314.1| Glutamate racemase [Bacillus cereus m1293] gi|228584894|gb|EEK43010.1| Glutamate racemase [Bacillus cereus m1293] gi|228625420|gb|EEK82177.1| Glutamate racemase [Bacillus cereus ATCC 4342] Length = 274 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH Sbjct: 181 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260 >gi|229163447|ref|ZP_04291398.1| Glutamate racemase [Bacillus cereus R309803] gi|228620016|gb|EEK76891.1| Glutamate racemase [Bacillus cereus R309803] Length = 269 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKR 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V + + V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKNVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK D+ + FG Sbjct: 236 LFLTTGKIDLFKEIASKWFG 255 >gi|116252373|ref|YP_768211.1| glutamate racemase [Rhizobium leguminosarum bv. viciae 3841] gi|115257021|emb|CAK08115.1| putative glutamate racemase [Rhizobium leguminosarum bv. viciae 3841] Length = 267 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 142/258 (55%), Positives = 191/258 (74%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+ Sbjct: 9 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFGRLLE 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 69 EHDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG++TD Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDVVSDEAVLSEIDQCFVEKEGRKTD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P+I D A+F S Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPQIADAVHPDNFDFAVFTS 248 Query: 254 GKPDIAMRRLMQGFGLKS 271 G PD A RRLMQGFGL + Sbjct: 249 GNPDFATRRLMQGFGLST 266 >gi|295706790|ref|YP_003599865.1| glutamate racemase [Bacillus megaterium DSM 319] gi|294804449|gb|ADF41515.1| glutamate racemase [Bacillus megaterium DSM 319] Length = 264 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 112/258 (43%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + + Sbjct: 1 MSRPIGVIDSGVGGLTVAKEIMRQLPKEQIMYIGDTARCPYGPRPSEEVRAFTWEMTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + K + VIACNTA ++ DE++ + +G + P + A T++ I ++ T Sbjct: 61 IAK-DIKMLVIACNTATAVVLDEIQEQL-DIPVIGVIEPGSRAALKVTKNHKIGVIGTNG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ ++ + + ++ + ++ + VE + E ++ ++ Sbjct: 119 TVKSQAYTHALRALHTRVEVENLACPLFVPLVESG----NYEGPEAQRIVKETLKPFYHT 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D ++L CTHYPL+ V ++ V + + + A +L N R +H Sbjct: 175 DMDTLILGCTHYPLLKPVIQEAIGPRVQLISSGEETAIEVSAILSYSNLLAPRNMEPEHY 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G ++ + F Sbjct: 235 FFTTGSTELFQSIASKWF 252 >gi|218663166|ref|ZP_03519096.1| glutamate racemase [Rhizobium etli IE4771] Length = 450 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 141/258 (54%), Positives = 190/258 (73%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+ Sbjct: 193 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLN 252 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 253 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 312 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+G++TD Sbjct: 313 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDDAVLAEIDQCFVEKDGQKTD 372 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P + D A+F S Sbjct: 373 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAMFTS 432 Query: 254 GKPDIAMRRLMQGFGLKS 271 G+ D A RRLMQGFGLK+ Sbjct: 433 GQQDFATRRLMQGFGLKA 450 >gi|241204880|ref|YP_002975976.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858770|gb|ACS56437.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 267 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 142/257 (55%), Positives = 191/257 (74%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +L+FDSGIGGL VL+++R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+ Sbjct: 9 KPVLVFDSGIGGLTVLREVRVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFGRLLE 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 69 EHDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG++TD Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDEAVLTEIDQCFVEKEGRKTD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P+I D A+F S Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPQIADAVHPDNFDFAVFTS 248 Query: 254 GKPDIAMRRLMQGFGLK 270 G PD A RRLMQGFGL Sbjct: 249 GNPDFATRRLMQGFGLS 265 >gi|42783635|ref|NP_980882.1| glutamate racemase [Bacillus cereus ATCC 10987] gi|206975961|ref|ZP_03236871.1| glutamate racemase [Bacillus cereus H3081.97] gi|217961978|ref|YP_002340548.1| glutamate racemase [Bacillus cereus AH187] gi|222097946|ref|YP_002532003.1| glutamate racemase [Bacillus cereus Q1] gi|229141225|ref|ZP_04269764.1| Glutamate racemase [Bacillus cereus BDRD-ST26] gi|47606713|sp|O31332|MURI_BACC1 RecName: Full=Glutamate racemase gi|42739564|gb|AAS43490.1| glutamate racemase [Bacillus cereus ATCC 10987] gi|206745713|gb|EDZ57110.1| glutamate racemase [Bacillus cereus H3081.97] gi|217068220|gb|ACJ82470.1| glutamate racemase [Bacillus cereus AH187] gi|221242004|gb|ACM14714.1| glutamate racemase [Bacillus cereus Q1] gi|228642266|gb|EEK98558.1| Glutamate racemase [Bacillus cereus BDRD-ST26] gi|324328386|gb|ADY23646.1| glutamate racemase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 269 Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|152976904|ref|YP_001376421.1| glutamate racemase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025656|gb|ABS23426.1| glutamate racemase [Bacillus cytotoxicus NVH 391-98] Length = 267 Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 116/259 (44%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + + Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + VIACNTA ++ +E++ P + +G + P + A T + + ++ T Sbjct: 61 LA-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTCHVGVIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + S ++ + ++ VE ++ + +++ ++ + Sbjct: 119 TVKSGAYEDALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKHT 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 175 EIDTLILGCTHYPILGPVIKRVMGEKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +GK D+ + FG Sbjct: 235 FLTTGKIDLFKEIASKWFG 253 >gi|320547382|ref|ZP_08041671.1| glutamate racemase [Streptococcus equinus ATCC 9812] gi|320447978|gb|EFW88732.1| glutamate racemase [Streptococcus equinus ATCC 9812] Length = 269 Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+ ++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVHELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + V ACNTA + E++ + LG + P A T++G Sbjct: 53 YTWELVNFLLTK-NVKMIVFACNTATAVAWKEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I S + + ++ VE ++ KK + Sbjct: 111 KIGVIGTPMTINSEVYPEKIKSLSPKMEVSGLACPKFVPIVESN----EMTSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 ESLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPDVKLIDSGAECIRDVSVLLNYFEINH 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 ++T +H + + + + Sbjct: 226 NRTEDVTNHHFYTTASSQSFKKIAVNWL 253 >gi|294501442|ref|YP_003565142.1| glutamate racemase [Bacillus megaterium QM B1551] gi|294351379|gb|ADE71708.1| glutamate racemase [Bacillus megaterium QM B1551] Length = 264 Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 112/258 (43%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + + Sbjct: 1 MSRPIGVIDSGVGGLTVAKEIMRQLPKEQIMYIGDTARCPYGPRPSEEVRAFTWEMTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + K + VIACNTA ++ DE++ + +G + P + A T++ I ++ T Sbjct: 61 VGK-DIKMLVIACNTATAVVLDEIQEQL-DIPVIGVIEPGSRAALKVTKNHKIGVIGTNG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ ++ + + ++ + ++ + VE + E ++ ++ Sbjct: 119 TVKSQAYTHALRALHTRVEVENLACPLFVPLVESG----NYEGPEAQRIVKETLKPFYHT 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D ++L CTHYPL+ V ++ V + + + A +L N R +H Sbjct: 175 DMDTLILGCTHYPLLKPVIQEAIGPRVQLISSGEETAIEVSAILSYSNLLAPRNMEPEHY 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G ++ + F Sbjct: 235 FFTTGSTELFQSIASKWF 252 >gi|223934204|ref|ZP_03626140.1| glutamate racemase [Streptococcus suis 89/1591] gi|223897120|gb|EEF63545.1| glutamate racemase [Streptococcus suis 89/1591] Length = 264 Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 18/270 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V +++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + V ACNTA + +E++ + LG + P A TQ+G Sbjct: 53 YTWQLVNFLLTK-NVKMIVFACNTATAVAWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T++ I + + + ++ A VE + + + + + + Sbjct: 111 KVGVLGTAMTIQSDIYRQKIQALSPKTQVDSLACPKFAPLVESNSHQSSLAKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + + V +D+ AR LL ++ Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFGL 269 +R D H + + P G+ Sbjct: 226 SRTEKDIQHRFYTTASPAAFKEIAESWMGI 255 >gi|118479648|ref|YP_896799.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam] gi|228917121|ref|ZP_04080679.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228935802|ref|ZP_04098614.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948207|ref|ZP_04110491.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093579|ref|ZP_04224680.1| Glutamate racemase [Bacillus cereus Rock3-42] gi|229124023|ref|ZP_04253215.1| Glutamate racemase [Bacillus cereus 95/8201] gi|229186725|ref|ZP_04313883.1| Glutamate racemase [Bacillus cereus BGSC 6E1] gi|118418873|gb|ABK87292.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam] gi|228596738|gb|EEK54400.1| Glutamate racemase [Bacillus cereus BGSC 6E1] gi|228659325|gb|EEL14973.1| Glutamate racemase [Bacillus cereus 95/8201] gi|228689788|gb|EEL43594.1| Glutamate racemase [Bacillus cereus Rock3-42] gi|228811565|gb|EEM57902.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823859|gb|EEM69679.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228842539|gb|EEM87629.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 274 Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH Sbjct: 181 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260 >gi|229175163|ref|ZP_04302679.1| Glutamate racemase [Bacillus cereus MM3] gi|228608299|gb|EEK65605.1| Glutamate racemase [Bacillus cereus MM3] Length = 274 Score = 318 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260 >gi|146319360|ref|YP_001199072.1| glutamate racemase [Streptococcus suis 05ZYH33] gi|146321565|ref|YP_001201276.1| glutamate racemase [Streptococcus suis 98HAH33] gi|253752389|ref|YP_003025530.1| glutamate racemase [Streptococcus suis SC84] gi|253754215|ref|YP_003027356.1| glutamate racemase [Streptococcus suis P1/7] gi|253756149|ref|YP_003029289.1| glutamate racemase [Streptococcus suis BM407] gi|166231062|sp|A4W3D7|MURI_STRS2 RecName: Full=Glutamate racemase gi|166231064|sp|A4VX33|MURI_STRSY RecName: Full=Glutamate racemase gi|145690166|gb|ABP90672.1| Glutamate racemase [Streptococcus suis 05ZYH33] gi|145692371|gb|ABP92876.1| Glutamate racemase [Streptococcus suis 98HAH33] gi|251816678|emb|CAZ52319.1| glutamate racemase [Streptococcus suis SC84] gi|251818613|emb|CAZ56447.1| glutamate racemase [Streptococcus suis BM407] gi|251820461|emb|CAR47171.1| glutamate racemase [Streptococcus suis P1/7] gi|292558992|gb|ADE31993.1| Glutamate racemase [Streptococcus suis GZ1] Length = 264 Score = 318 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 111/270 (41%), Gaps = 18/270 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V +++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + V ACNTA ++ +E++ + LG + P A TQ+G Sbjct: 53 YTWQLVNFLLTK-NVKMIVFACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T++ I + + + ++ A VE + + + + + + Sbjct: 111 KVGVLGTAMTIQSDIYREKIQALSPETQVDSLACPKFAPLVESNSHQSSLAKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + + V +D+ AR LL ++ Sbjct: 171 PLV-----GQVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFGL 269 +R D H + + P G+ Sbjct: 226 SRTEKDIQHRFYTTASPAAFKEIAESWMGI 255 >gi|228987734|ref|ZP_04147845.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772008|gb|EEM20463.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 269 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKK 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|229032138|ref|ZP_04188115.1| Glutamate racemase [Bacillus cereus AH1271] gi|228729194|gb|EEL80193.1| Glutamate racemase [Bacillus cereus AH1271] Length = 274 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260 >gi|170708321|ref|ZP_02898765.1| glutamate racemase [Bacillus anthracis str. A0389] gi|170126696|gb|EDS95579.1| glutamate racemase [Bacillus anthracis str. A0389] Length = 269 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGDFESEMAYEVVRETLQ----PLKN 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|229105119|ref|ZP_04235770.1| Glutamate racemase [Bacillus cereus Rock3-28] gi|228678300|gb|EEL32526.1| Glutamate racemase [Bacillus cereus Rock3-28] Length = 273 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260 >gi|30264552|ref|NP_846929.1| glutamate racemase [Bacillus anthracis str. Ames] gi|47530017|ref|YP_021366.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187374|ref|YP_030626.1| glutamate racemase [Bacillus anthracis str. Sterne] gi|49478653|ref|YP_038536.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65321850|ref|ZP_00394809.1| COG0796: Glutamate racemase [Bacillus anthracis str. A2012] gi|165871456|ref|ZP_02216103.1| glutamate racemase [Bacillus anthracis str. A0488] gi|167635587|ref|ZP_02393899.1| glutamate racemase [Bacillus anthracis str. A0442] gi|167641657|ref|ZP_02399902.1| glutamate racemase [Bacillus anthracis str. A0193] gi|170688300|ref|ZP_02879510.1| glutamate racemase [Bacillus anthracis str. A0465] gi|177653155|ref|ZP_02935442.1| glutamate racemase [Bacillus anthracis str. A0174] gi|190567038|ref|ZP_03019954.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I] gi|196034413|ref|ZP_03101822.1| glutamate racemase [Bacillus cereus W] gi|196039175|ref|ZP_03106481.1| glutamate racemase [Bacillus cereus NVH0597-99] gi|196044858|ref|ZP_03112092.1| glutamate racemase [Bacillus cereus 03BB108] gi|218905685|ref|YP_002453519.1| glutamate racemase [Bacillus cereus AH820] gi|225866466|ref|YP_002751844.1| glutamate racemase [Bacillus cereus 03BB102] gi|227817263|ref|YP_002817272.1| glutamate racemase [Bacillus anthracis str. CDC 684] gi|228929530|ref|ZP_04092549.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229602085|ref|YP_002868766.1| glutamate racemase [Bacillus anthracis str. A0248] gi|254687028|ref|ZP_05150886.1| glutamate racemase [Bacillus anthracis str. CNEVA-9066] gi|254724590|ref|ZP_05186373.1| glutamate racemase [Bacillus anthracis str. A1055] gi|254736586|ref|ZP_05194292.1| glutamate racemase [Bacillus anthracis str. Western North America USA6153] gi|254741624|ref|ZP_05199311.1| glutamate racemase [Bacillus anthracis str. Kruger B] gi|254754778|ref|ZP_05206813.1| glutamate racemase [Bacillus anthracis str. Vollum] gi|254757610|ref|ZP_05209637.1| glutamate racemase [Bacillus anthracis str. Australia 94] gi|254766106|sp|C1ETT1|MURI_BACC3 RecName: Full=Glutamate racemase gi|30259210|gb|AAP28415.1| glutamate racemase [Bacillus anthracis str. Ames] gi|47505165|gb|AAT33841.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181301|gb|AAT56677.1| glutamate racemase [Bacillus anthracis str. Sterne] gi|49330209|gb|AAT60855.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164712753|gb|EDR18283.1| glutamate racemase [Bacillus anthracis str. A0488] gi|167510364|gb|EDR85765.1| glutamate racemase [Bacillus anthracis str. A0193] gi|167529007|gb|EDR91762.1| glutamate racemase [Bacillus anthracis str. A0442] gi|170667806|gb|EDT18559.1| glutamate racemase [Bacillus anthracis str. A0465] gi|172081679|gb|EDT66750.1| glutamate racemase [Bacillus anthracis str. A0174] gi|190562029|gb|EDV15998.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I] gi|195992955|gb|EDX56914.1| glutamate racemase [Bacillus cereus W] gi|196024346|gb|EDX63019.1| glutamate racemase [Bacillus cereus 03BB108] gi|196029802|gb|EDX68403.1| glutamate racemase [Bacillus cereus NVH0597-99] gi|218535114|gb|ACK87512.1| glutamate racemase [Bacillus cereus AH820] gi|225786992|gb|ACO27209.1| glutamate racemase [Bacillus cereus 03BB102] gi|227006462|gb|ACP16205.1| glutamate racemase [Bacillus anthracis str. CDC 684] gi|228830109|gb|EEM75727.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229266493|gb|ACQ48130.1| glutamate racemase [Bacillus anthracis str. A0248] Length = 269 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|302186441|ref|ZP_07263114.1| glutamate racemase [Pseudomonas syringae pv. syringae 642] Length = 271 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL Sbjct: 71 EQGAKAL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L +E + +I++ ++ R Sbjct: 130 QSARFAALLDRFASDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARC 185 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D + Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGVLASGVARDTLYWS 245 Query: 253 SGKPDIAMRRL 263 S PD + L Sbjct: 246 SDIPDNFRKIL 256 >gi|70732473|ref|YP_262235.1| glutamate racemase [Pseudomonas fluorescens Pf-5] gi|68346772|gb|AAY94378.1| glutamate racemase [Pseudomonas fluorescens Pf-5] Length = 267 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL +++ L+P +Y D PYG +++R L + Sbjct: 7 EAPIGVFDSGVGGLSVLAEIQQLLPHESLLYFGDCGHIPYGEKTPEFIRQRCS-LMARFF 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNTA +LR +P +G PA+K AAA T+SG++ +L+T TL Sbjct: 66 REQGAKALVLACNTATVAGVADLRRDYPDWPIVGMEPAVKPAAAATRSGVVGVLATTGTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +++ + G Sbjct: 126 QSAKFAALLDRFATDVKVVTQPCPGLVEMIENG----DLHSAALRQLLHGYLEPLLAAGC 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTHYP + + Q+ P P+ +D ++AR+ + LL + + + Sbjct: 182 DTIILGCTHYPFLKPLLAQMLPGPISLIDTGAAVARQLQRLLDEGDLRAQGPARETCFWT 241 Query: 253 SGKPDIAMRRL 263 SG R L Sbjct: 242 SGDVPHFARVL 252 >gi|228960759|ref|ZP_04122398.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798975|gb|EEM45950.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 269 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKKLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|229019709|ref|ZP_04176516.1| Glutamate racemase [Bacillus cereus AH1273] gi|229027350|ref|ZP_04183605.1| Glutamate racemase [Bacillus cereus AH1272] gi|228733958|gb|EEL84697.1| Glutamate racemase [Bacillus cereus AH1272] gi|228741616|gb|EEL91809.1| Glutamate racemase [Bacillus cereus AH1273] Length = 274 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260 >gi|56421203|ref|YP_148521.1| glutamate racemase [Geobacillus kaustophilus HTA426] gi|261418316|ref|YP_003251998.1| glutamate racemase [Geobacillus sp. Y412MC61] gi|297529170|ref|YP_003670445.1| glutamate racemase [Geobacillus sp. C56-T3] gi|319767724|ref|YP_004133225.1| glutamate racemase [Geobacillus sp. Y412MC52] gi|81557797|sp|Q5KWI3|MURI_GEOKA RecName: Full=Glutamate racemase gi|56381045|dbj|BAD76953.1| glutamate racemase [Geobacillus kaustophilus HTA426] gi|261374773|gb|ACX77516.1| glutamate racemase [Geobacillus sp. Y412MC61] gi|297252422|gb|ADI25868.1| glutamate racemase [Geobacillus sp. C56-T3] gi|317112590|gb|ADU95082.1| glutamate racemase [Geobacillus sp. Y412MC52] Length = 264 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + D Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKEQIIYLGDTARCPYGPRPVEEVRRFTWQMI-DY 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + VIACNTA + D++R+ + LG + P + A T+ G I ++ T Sbjct: 60 LRQYPLKMLVIACNTATAVALDDVRAKL-DIPVLGVIHPGARAALKATRRGHIGVIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R + S + + ++ VE + E + Sbjct: 119 TIRSRAYEKALQSINPRVQVESLACPKFVPLVESG----DFEGQEAMAIVAESLAPLRPL 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 DV++L CTHYPL+ + R V + + AR +L T +H Sbjct: 175 PIDVLILGCTHYPLLAPLIRTYMGKRVKLICSGGETAREVSAILHHSQLLYTGEREPEHL 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G ++ + + FG Sbjct: 235 FFTTGPKELFEKISGKWFG 253 >gi|330951099|gb|EGH51359.1| glutamate racemase [Pseudomonas syringae Cit 7] Length = 271 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL Sbjct: 71 EQGAKAL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +I++ ++ R Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARC 185 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTHYP + + RQ+ P V +D ++AR+ + LL R + + V D + Sbjct: 186 DTIILGCTHYPFLKPLLRQMLPESVTLIDTGAAVARQLQRLLARSDLLASGVARDTVYWS 245 Query: 253 SGKPDIAMRRL 263 S PD + L Sbjct: 246 SDIPDNFRKIL 256 >gi|163942231|ref|YP_001647115.1| glutamate racemase [Bacillus weihenstephanensis KBAB4] gi|163864428|gb|ABY45487.1| glutamate racemase [Bacillus weihenstephanensis KBAB4] Length = 267 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 115/259 (44%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + + Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 61 LD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 119 TVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKST 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 175 DIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 235 FLTTGKIGLFKEIASKWFG 253 >gi|228967586|ref|ZP_04128610.1| Glutamate racemase [Bacillus thuringiensis serovar sotto str. T04001] gi|229081749|ref|ZP_04214242.1| Glutamate racemase [Bacillus cereus Rock4-2] gi|229129779|ref|ZP_04258746.1| Glutamate racemase [Bacillus cereus BDRD-Cer4] gi|229152686|ref|ZP_04280874.1| Glutamate racemase [Bacillus cereus m1550] gi|228630832|gb|EEK87473.1| Glutamate racemase [Bacillus cereus m1550] gi|228653695|gb|EEL09566.1| Glutamate racemase [Bacillus cereus BDRD-Cer4] gi|228701594|gb|EEL54087.1| Glutamate racemase [Bacillus cereus Rock4-2] gi|228792110|gb|EEM39688.1| Glutamate racemase [Bacillus thuringiensis serovar sotto str. T04001] Length = 274 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260 >gi|227518376|ref|ZP_03948425.1| glutamate racemase [Enterococcus faecalis TX0104] gi|227074054|gb|EEI12017.1| glutamate racemase [Enterococcus faecalis TX0104] Length = 275 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 16/273 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG + Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + +L K + VIACNTA + +E+++ P + +G + P + A T+ Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I ++ T T++ I S + + VE + KK Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESNQYRSSVA----KKI 167 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + K D ++L CTHYPL+ V + + V +D+ LL + Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGNHVTLIDSGAETVGEVSMLLDYFDI 227 Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 T H + +G + G++ Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260 >gi|229098955|ref|ZP_04229890.1| Glutamate racemase [Bacillus cereus Rock3-29] gi|229117984|ref|ZP_04247344.1| Glutamate racemase [Bacillus cereus Rock1-3] gi|228665433|gb|EEL20915.1| Glutamate racemase [Bacillus cereus Rock1-3] gi|228684453|gb|EEL38396.1| Glutamate racemase [Bacillus cereus Rock3-29] Length = 268 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|315573713|gb|EFU85904.1| glutamate racemase [Enterococcus faecalis TX0309B] gi|315582672|gb|EFU94863.1| glutamate racemase [Enterococcus faecalis TX0309A] Length = 275 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 16/273 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG + Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + +L K + VIACNTA + +E+++ P + +G + P + A T+ Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I ++ T T++ I S + + VE + KK Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESNQYRSSVA----KKI 167 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + K D ++L CTHYPL+ V + + V +D+ LL + Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227 Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 T H + +G + G++ Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260 >gi|301055994|ref|YP_003794205.1| glutamate racemase [Bacillus anthracis CI] gi|300378163|gb|ADK07067.1| glutamate racemase [Bacillus cereus biovar anthracis str. CI] Length = 267 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + + Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 61 LD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S ++ + + VE ++ + +++ ++ + Sbjct: 119 TVKSGAYEEALKSINNRVMVESFACPPFVELVESGNFESEMAYEVVRETLQ----PLKNT 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH Sbjct: 175 DIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 235 FLTTGKIGLFKEIASKWFG 253 >gi|125718584|ref|YP_001035717.1| glutamate racemase [Streptococcus sanguinis SK36] gi|166231063|sp|A3CPR2|MURI_STRSV RecName: Full=Glutamate racemase gi|125498501|gb|ABN45167.1| Glutamate racemase, putative [Streptococcus sanguinis SK36] Length = 264 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I + + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + V +D+ R LL ++ Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R +H + + LK Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLRLK 256 >gi|151567719|pdb|2JFO|A Chain A, Crystal Structure Of Enterococcus Faecalis Glutamate Racemase In Complex With D- And L-Glutamate gi|151567720|pdb|2JFO|B Chain B, Crystal Structure Of Enterococcus Faecalis Glutamate Racemase In Complex With D- And L-Glutamate gi|151567721|pdb|2JFP|A Chain A, Crystal Structure Of Enterococcus Faecalis Glutamate Racemase In Complex With D-Glutamate gi|151567722|pdb|2JFP|B Chain B, Crystal Structure Of Enterococcus Faecalis Glutamate Racemase In Complex With D-Glutamate Length = 293 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 9/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I + DSG+GGL VL++ +P IY+ D PYG + + + +L Sbjct: 24 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 83 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K + VIACNTA + +E+++ P + +G + P + A T++ I ++ T T Sbjct: 84 KKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTKNNKIGVIGTLGT 141 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I S + ++ VE + KK + + K Sbjct: 142 IKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKIVAETLQALQLKG 197 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHA 249 D ++L CTHYPL+ V + + V +D+ LL + T H Sbjct: 198 LDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQPHE 257 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 + +G + G++ Sbjct: 258 FYTTGSAKMFEEIASSWLGIE 278 >gi|149241773|pdb|2GZM|A Chain A, Crystal Structure Of The Glutamate Racemase From Bacillus Anthracis gi|149241774|pdb|2GZM|B Chain B, Crystal Structure Of The Glutamate Racemase From Bacillus Anthracis gi|149241775|pdb|2GZM|C Chain C, Crystal Structure Of The Glutamate Racemase From Bacillus Anthracis gi|149241776|pdb|2GZM|D Chain D, Crystal Structure Of The Glutamate Racemase From Bacillus Anthracis Length = 267 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 1 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 60 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 61 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 119 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH Sbjct: 175 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 234 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 235 LFLTTGKIGLFKEIASKWFG 254 >gi|30022575|ref|NP_834206.1| glutamate racemase [Bacillus cereus ATCC 14579] gi|206969797|ref|ZP_03230751.1| glutamate racemase [Bacillus cereus AH1134] gi|218233554|ref|YP_002369290.1| glutamate racemase [Bacillus cereus B4264] gi|218899650|ref|YP_002448061.1| glutamate racemase [Bacillus cereus G9842] gi|228910317|ref|ZP_04074134.1| Glutamate racemase [Bacillus thuringiensis IBL 200] gi|229048200|ref|ZP_04193769.1| Glutamate racemase [Bacillus cereus AH676] gi|229072001|ref|ZP_04205211.1| Glutamate racemase [Bacillus cereus F65185] gi|229111955|ref|ZP_04241499.1| Glutamate racemase [Bacillus cereus Rock1-15] gi|229147053|ref|ZP_04275413.1| Glutamate racemase [Bacillus cereus BDRD-ST24] gi|229180762|ref|ZP_04308100.1| Glutamate racemase [Bacillus cereus 172560W] gi|229192695|ref|ZP_04319654.1| Glutamate racemase [Bacillus cereus ATCC 10876] gi|296504971|ref|YP_003666671.1| glutamate racemase [Bacillus thuringiensis BMB171] gi|226722979|sp|B7IIZ3|MURI_BACC2 RecName: Full=Glutamate racemase gi|226722980|sp|B7HEB5|MURI_BACC4 RecName: Full=Glutamate racemase gi|29898133|gb|AAP11407.1| Glutamate racemase [Bacillus cereus ATCC 14579] gi|206735485|gb|EDZ52653.1| glutamate racemase [Bacillus cereus AH1134] gi|218161511|gb|ACK61503.1| glutamate racemase [Bacillus cereus B4264] gi|218541324|gb|ACK93718.1| glutamate racemase [Bacillus cereus G9842] gi|228590785|gb|EEK48645.1| Glutamate racemase [Bacillus cereus ATCC 10876] gi|228602740|gb|EEK60223.1| Glutamate racemase [Bacillus cereus 172560W] gi|228636441|gb|EEK92911.1| Glutamate racemase [Bacillus cereus BDRD-ST24] gi|228671519|gb|EEL26819.1| Glutamate racemase [Bacillus cereus Rock1-15] gi|228711160|gb|EEL63125.1| Glutamate racemase [Bacillus cereus F65185] gi|228723187|gb|EEL74563.1| Glutamate racemase [Bacillus cereus AH676] gi|228849377|gb|EEM94214.1| Glutamate racemase [Bacillus thuringiensis IBL 200] gi|296326023|gb|ADH08951.1| glutamate racemase [Bacillus thuringiensis BMB171] Length = 269 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|228974598|ref|ZP_04135164.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981193|ref|ZP_04141493.1| Glutamate racemase [Bacillus thuringiensis Bt407] gi|228778393|gb|EEM26660.1| Glutamate racemase [Bacillus thuringiensis Bt407] gi|228785001|gb|EEM33014.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 274 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 181 TGIDTLILGCTHYPILGPVIKKVMGNKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260 >gi|2462097|emb|CAA71858.1| glutamate racemase [Bacillus cereus ATCC 14579] Length = 258 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 8/263 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFGLKS 271 +GK + + FG + Sbjct: 236 LFLTTGKIGLFKEIASKWFGRPA 258 >gi|306830119|ref|ZP_07463303.1| glutamate racemase [Streptococcus mitis ATCC 6249] gi|304427645|gb|EFM30741.1| glutamate racemase [Streptococcus mitis ATCC 6249] Length = 264 Score = 317 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAKL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 +R H + + + + Sbjct: 226 SRDAGPLQHRFYTTASSQSFAQIGAEWL 253 >gi|95931009|ref|ZP_01313737.1| Glutamate racemase [Desulfuromonas acetoxidans DSM 684] gi|95132905|gb|EAT14576.1| Glutamate racemase [Desulfuromonas acetoxidans DSM 684] Length = 289 Score = 317 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 6/255 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +N+I +FDSG+GGL VL ++R L+P + IY+ D PYG+ + +L Sbjct: 16 ENAIGVFDSGVGGLTVLHELRRLLPGENLIYLGDTARVPYGSKSPETVCSYSEQAAEFLL 75 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K Q + V+ACNTA + + L+ P +P + A ++ ++ ++ T T+ Sbjct: 76 AK-QVKMIVVACNTASSFALERLQQCLPVPVVGVILPGARCAVRLSRRHVVGVIGTHGTV 134 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + EE + ++ + ++ Sbjct: 135 SSDAYPRALKALQPDMKVVSEPCPLFVPLAEEGWAEHAVAHQVAREYLAPLL----EQQI 190 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYPL+ RQ+ P V +D++ A + LL F+ Sbjct: 191 DTLVLGCTHYPLLKPTLRQVLPDTVQLVDSAQETALEVKELLSEHGLLNPGERGSWTFFV 250 Query: 253 SGKPDIAMRRLMQGF 267 + P ++ + QGF Sbjct: 251 TDVPTRFVQ-VGQGF 264 >gi|227552906|ref|ZP_03982955.1| glutamate racemase [Enterococcus faecalis HH22] gi|227177960|gb|EEI58932.1| glutamate racemase [Enterococcus faecalis HH22] Length = 275 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 16/273 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG + Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + +L K + VIACNTA + +E+++ P + +G + P + A T+ Sbjct: 54 VQFSWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I ++ T T++ I S + + VE + KK Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESNQYRSSVA----KKI 167 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + K D ++L CTHYPL+ V + + V +D+ LL + Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227 Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 T H + +G + G++ Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260 >gi|306824554|ref|ZP_07457900.1| glutamate racemase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|315611776|ref|ZP_07886698.1| glutamate racemase [Streptococcus sanguinis ATCC 49296] gi|322375928|ref|ZP_08050439.1| glutamate racemase [Streptococcus sp. C300] gi|331265743|ref|YP_004325373.1| glutamate racemase [Streptococcus oralis Uo5] gi|304433341|gb|EFM36311.1| glutamate racemase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|315316191|gb|EFU64221.1| glutamate racemase [Streptococcus sanguinis ATCC 49296] gi|321279196|gb|EFX56238.1| glutamate racemase [Streptococcus sp. C300] gi|326682415|emb|CBZ00032.1| glutamate racemase [Streptococcus oralis Uo5] Length = 264 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 +R H + + + + Sbjct: 226 SRDAGPLQHRFYTTANSQSFAQIGAEWL 253 >gi|295112705|emb|CBL31342.1| glutamate racemase [Enterococcus sp. 7L76] Length = 273 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 9/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I + DSG+GGL VL++ +P IY+ D PYG + + + +L Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K + VIACNTA + +E+++ P + +G + P + A T++ I ++ T T Sbjct: 64 KKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTKNNKIGVIGTLGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I S + ++ VE + KK + + K Sbjct: 122 IKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKIVAETLQALQLKG 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HA 249 D ++L CTHYPL+ V + + V +D+ LL + T H Sbjct: 178 LDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPKQTHE 237 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 + +G + G++ Sbjct: 238 FYTTGSAKMFEEIASSWLGIE 258 >gi|228941671|ref|ZP_04104218.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228817883|gb|EEM63961.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942279|gb|AEA18175.1| glutamate racemase [Bacillus thuringiensis serovar chinensis CT-43] Length = 269 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 176 TGIDTLILGCTHYPILGPVIKKVMGNKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|319938692|ref|ZP_08013056.1| glutamate racemase [Streptococcus anginosus 1_2_62CV] gi|319811742|gb|EFW08008.1| glutamate racemase [Streptococcus anginosus 1_2_62CV] Length = 264 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPADQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K + V+ACNTA ++ +E++ + LG + P A +Q G Sbjct: 53 YTWQLVQFLLTK-NVKMIVLACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKASQHG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I I+ TP T++ I + + + +S VE ++ KK + Sbjct: 111 KIGIIGTPMTIQSDIYRQKIERLLPEVEVTSLSCPKFVPLVESN----ELSSSITKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + +GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 167 ESLMPLKGK-VDTLVLGCTHYPLLKPIIQNVMGPTVKLIDSGAECVRDISVLLNYFEINH 225 Query: 242 TRVF--DDHALFLSGKPDIAMRRLMQGF 267 +R H F + Sbjct: 226 SREGELPQHRFFTTANAKSFAEIAETWL 253 >gi|192988279|pdb|2VVT|A Chain A, Glutamate Racemase (Muri) From E. Faecalis In Complex With A 9-Benzyl Purine Inhibitor gi|192988280|pdb|2VVT|B Chain B, Glutamate Racemase (Muri) From E. Faecalis In Complex With A 9-Benzyl Purine Inhibitor Length = 290 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 9/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I + DSG+GGL VL++ +P IY+ D PYG + + + +L Sbjct: 24 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 83 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K + VIACNTA + +E+++ P + +G + P + A T++ I ++ T T Sbjct: 84 KKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTKNNKIGVIGTLGT 141 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I S + ++ VE + KK + + K Sbjct: 142 IKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKIVAETLQALQLKG 197 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHA 249 D ++L CTHYPL+ V + + V +D+ LL + T H Sbjct: 198 LDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQPHE 257 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 + +G + G++ Sbjct: 258 FYTTGSAKMFEEIASSWLGIE 278 >gi|229169224|ref|ZP_04296938.1| Glutamate racemase [Bacillus cereus AH621] gi|228614290|gb|EEK71401.1| Glutamate racemase [Bacillus cereus AH621] Length = 270 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 3 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 63 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 121 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 177 TDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 236 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 237 LFLTTGKIGLFKEIASKWFG 256 >gi|229013698|ref|ZP_04170827.1| Glutamate racemase [Bacillus mycoides DSM 2048] gi|228747620|gb|EEL97494.1| Glutamate racemase [Bacillus mycoides DSM 2048] Length = 274 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260 >gi|289627915|ref|ZP_06460869.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647290|ref|ZP_06478633.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868901|gb|EGH03610.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 271 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 123/263 (46%), Gaps = 10/263 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFI 58 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + ++ L V+ACNTA +R +P +G PA+K AA T+S Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T TL+ + L+ + + + L +E + +I++ + Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLL 173 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + R D I+L CTHYP + + +++ P V +D ++AR+ + LL R + Sbjct: 174 QHYVEPLLAARCDTIILGCTHYPFLKPLLQEMLPESVTLIDTGAAVARQLQRLLSRSSLL 233 Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263 T D + S PD + L Sbjct: 234 ATGDARDTVYWSSDIPDNFRKIL 256 >gi|294780992|ref|ZP_06746344.1| glutamate racemase [Enterococcus faecalis PC1.1] gi|300859676|ref|ZP_07105764.1| glutamate racemase [Enterococcus faecalis TUSoD Ef11] gi|294451938|gb|EFG20388.1| glutamate racemase [Enterococcus faecalis PC1.1] gi|300850494|gb|EFK78243.1| glutamate racemase [Enterococcus faecalis TUSoD Ef11] gi|323480360|gb|ADX79799.1| glutamate racemase [Enterococcus faecalis 62] Length = 273 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 9/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I + DSG+GGL VL++ +P IY+ D PYG + + + +L Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K + VIACNTA + +E+++ P + +G + P + A T++ I ++ T T Sbjct: 64 KKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTKNNKIGVIGTLGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I S + ++ VE + KK + + K Sbjct: 122 IKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKIVAETLQALQLKG 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHA 249 D ++L CTHYPL+ V + + V +D+ LL + T H Sbjct: 178 LDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQPHE 237 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 + +G + G++ Sbjct: 238 FYTTGSAKMFEEIASSWLGIE 258 >gi|319758794|gb|ADV70736.1| glutamate racemase [Streptococcus suis JS14] Length = 264 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 18/270 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V +++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K + V ACNTA ++ +E++ + LG + P A TQ+G Sbjct: 53 YTWQVGNFLLTK-NVKMIVFACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T++ I + + + ++ A VE + + + + + + Sbjct: 111 KVGVLGTAMTIQSDIYREKIQALSPETQVDSLACPKFAPLVESNSHQSSLAKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + + V +D+ AR LL ++ Sbjct: 171 PLV-----GQVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFGL 269 +R D H + + P G+ Sbjct: 226 SRTEKDIQHRFYTTASPAAFKEIAESWMGI 255 >gi|312864874|ref|ZP_07725105.1| glutamate racemase [Streptococcus downei F0415] gi|311100001|gb|EFQ58214.1| glutamate racemase [Streptococcus downei F0415] Length = 264 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 18/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAQQIRD 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++ + LG V P A T SG Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKEKL-DIPVLGVVLPGSSAAIKSTSSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I Q + ++ A VE ++ KK + Sbjct: 111 KIGVIGTPMTVKSDIYREKIVDLAPQMQVTSLACPRFAPLVESN----QMTSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ESLAPLVGK-VDTLILGCTHYPLLRGIIQNVMGPSVKLIDSGAETIRDVSVLLNYFQLNR 225 Query: 242 TR--VFDDHALFLSGKPDIAMRRLMQGFG 268 +R H + + + G Sbjct: 226 SREVATSQHRFYTTAGVESFKEIAETWLG 254 >gi|270292152|ref|ZP_06198367.1| glutamate racemase [Streptococcus sp. M143] gi|270279680|gb|EFA25522.1| glutamate racemase [Streptococcus sp. M143] Length = 264 Score = 316 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 +R H + + + + Sbjct: 226 SRDAGPLQHRFYTTANSQSFAQIGEEWL 253 >gi|309798855|ref|ZP_07693116.1| glutamate racemase [Streptococcus infantis SK1302] gi|308117504|gb|EFO54919.1| glutamate racemase [Streptococcus infantis SK1302] Length = 264 Score = 316 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKASQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVKSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 +R H + + + + Sbjct: 226 SRDAAPLQHRFYTTANSQSFAQIGAEWL 253 >gi|296875970|ref|ZP_06900029.1| glutamate racemase [Streptococcus parasanguinis ATCC 15912] gi|296433045|gb|EFH18833.1| glutamate racemase [Streptococcus parasanguinis ATCC 15912] Length = 264 Score = 316 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K + V+ACNTA ++ +E++ + LG + P A T Sbjct: 53 YTWQMVNFLLTK-NVKMIVLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I S + ++ VE ++ KK + Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMKVTSLACPKFVPLVESN----ELASSVTKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLKPLVGK-VDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225 Query: 242 TR--VFDDHALFLSGKPDIAMRRLMQGF 267 +R + H + + + + Sbjct: 226 SRELLEQTHRFYTTANANSFAAIAEKWL 253 >gi|75760743|ref|ZP_00740765.1| Glutamate racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491771|gb|EAO54965.1| Glutamate racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 274 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYQVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260 >gi|315223134|ref|ZP_07865002.1| glutamate racemase [Streptococcus anginosus F0211] gi|315187823|gb|EFU21570.1| glutamate racemase [Streptococcus anginosus F0211] Length = 264 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K + V+ACNTA ++ +E++ + LG + P A +Q G Sbjct: 53 YTWQLVQFLLTK-NVKMIVLACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKASQHG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I I+ TP T++ I + + + +S VE ++ KK + Sbjct: 111 TIGIIGTPMTIQSDIYRQKIERLLPEVEVTSLSCPKFVPLVESN----ELSSSITKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + +GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 167 ESLMPLKGK-VDTLVLGCTHYPLLKPIIQNVMGPAVKLIDSGAECVRDISVLLNYFEINH 225 Query: 242 TRVF--DDHALFLSGKPDIAMRRLMQGF 267 +R H F + Sbjct: 226 SREGELPQHRFFTTANAKSFAEIAETWL 253 >gi|257866171|ref|ZP_05645824.1| glutamate racemase [Enterococcus casseliflavus EC30] gi|257872501|ref|ZP_05652154.1| glutamate racemase [Enterococcus casseliflavus EC10] gi|257800105|gb|EEV29157.1| glutamate racemase [Enterococcus casseliflavus EC30] gi|257806665|gb|EEV35487.1| glutamate racemase [Enterococcus casseliflavus EC10] Length = 274 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 102/259 (39%), Gaps = 10/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P +Y+ D PYG + + + +L Sbjct: 7 NRPIGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIEYTWQMTRFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 +K + VIACNTA + +E++ ++ +G + P + A +++ I ++ T T Sbjct: 67 EK-NIKMLVIACNTATAVALEEIKEQL-TIPVIGVILPGSRAAVKASKNQRIGVIGTNGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + ++ VE + KK + + KR Sbjct: 125 IKSDSYKRALHGKAPHASVVSLACPKFVPIVESK----QYHSSVAKKIVAETLRPLKNKR 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDH 248 D ++L CTHYPL+ + + + +D+ LL + T Q H Sbjct: 181 LDTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPKH 240 Query: 249 ALFLSGKPDIAMRRLMQGF 267 A F +G P + Sbjct: 241 AFFTTGSPKMFDEIANDWL 259 >gi|52081340|ref|YP_080131.1| glutamate racemase [Bacillus licheniformis ATCC 14580] gi|52004551|gb|AAU24493.1| glutamate racemase [Bacillus licheniformis ATCC 14580] Length = 271 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 107/261 (40%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ IY+ D PYG + + + + + Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYLGDTKRCPYGPRDRKEVLSYTWEMTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L ++ + VIACNTA + +E+ ++ +G V P + A T++ I ++ T Sbjct: 61 LSRHHIKMLVIACNTATAIALEEISREV-AIPVIGVVQPGARTAIKVTENQRIGVIGTEN 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + ++ + VE K ++ + + Sbjct: 120 TIKSGAYEEALLSLNGDLTVENLACPMFVPFVESG----KFLDETADEIVRTSLHPLRDS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L T +H Sbjct: 176 SIDTLILGCTHYPILKEPIQRYMGERVNIISSGDETAREVSTILSYNGLLSKTAEPPEHL 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 +G+ + FG + Sbjct: 236 FLTTGERARFTKIANDWFGYE 256 >gi|322385930|ref|ZP_08059571.1| glutamate racemase [Streptococcus cristatus ATCC 51100] gi|321270045|gb|EFX52964.1| glutamate racemase [Streptococcus cristatus ATCC 51100] Length = 264 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 109/271 (40%), Gaps = 18/271 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVVYIGDSARAPYGPRPAEQIRD 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A T G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKAKL-DIPVLGVILPGASAAIKSTTGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I + + + ++ VE + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRKKIEALSPEMEVQSLACPKFVPLVESNELQSSLTKKVVYETLH 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PL-----AGKVDTLVLGCTHYPLLRPIIQNMMGPSVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270 +R +H + + LK Sbjct: 226 SRDKHELNHRFYTTANAKRFAEIAENWLNLK 256 >gi|229062177|ref|ZP_04199501.1| Glutamate racemase [Bacillus cereus AH603] gi|228717160|gb|EEL68836.1| Glutamate racemase [Bacillus cereus AH603] Length = 274 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L DH Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNDGEEQSDH 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260 >gi|228954765|ref|ZP_04116787.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804963|gb|EEM51560.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 269 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 115/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRRFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +L + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LL-NLNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|228903012|ref|ZP_04067151.1| Glutamate racemase [Bacillus thuringiensis IBL 4222] gi|228856605|gb|EEN01126.1| Glutamate racemase [Bacillus thuringiensis IBL 4222] Length = 269 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYQVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|257875806|ref|ZP_05655459.1| glutamate racemase [Enterococcus casseliflavus EC20] gi|257809972|gb|EEV38792.1| glutamate racemase [Enterococcus casseliflavus EC20] Length = 274 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 102/259 (39%), Gaps = 10/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P +Y+ D PYG + + + +L Sbjct: 7 NRPIGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIEYTWQMTRFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 +K + VIACNTA + +E++ ++ +G + P + A +++ I ++ T T Sbjct: 67 EK-NIKMLVIACNTATAVALEEIKEQL-AIPVIGVILPGSRAAVKASKNQRIGVIGTNGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + ++ VE + KK + + KR Sbjct: 125 IKSDSYKRALHGKAPHASVVSLACPKFVPIVESK----QYHSSVAKKIVAETLRPLKNKR 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDH 248 D ++L CTHYPL+ + + + +D+ LL + T Q H Sbjct: 181 LDTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPQH 240 Query: 249 ALFLSGKPDIAMRRLMQGF 267 A F +G P + Sbjct: 241 AFFTTGSPKMFDEIANDWL 259 >gi|322390073|ref|ZP_08063608.1| glutamate racemase [Streptococcus parasanguinis ATCC 903] gi|321143200|gb|EFX38643.1| glutamate racemase [Streptococcus parasanguinis ATCC 903] Length = 264 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K + V+ACNTA ++ +E++ + LG + P A T Sbjct: 53 YTWQMVNFLLTK-NVKMIVLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I S + ++ VE ++ KK + Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMEVSSLACPKFVPLVESN----ELASSVTKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLKPLVGK-VDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225 Query: 242 TR--VFDDHALFLSGKPDIAMRRLMQGF 267 +R + H + + + + Sbjct: 226 SRELLEQTHRFYTTANANSFAAIAEKWL 253 >gi|52141014|ref|YP_085815.1| glutamate racemase [Bacillus cereus E33L] gi|81686030|sp|Q633V2|MURI_BACCZ RecName: Full=Glutamate racemase gi|51974483|gb|AAU16033.1| glutamate racemase [Bacillus cereus E33L] Length = 269 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTERCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVVVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|261408424|ref|YP_003244665.1| glutamate racemase [Paenibacillus sp. Y412MC10] gi|329928213|ref|ZP_08282144.1| glutamate racemase [Paenibacillus sp. HGF5] gi|261284887|gb|ACX66858.1| glutamate racemase [Paenibacillus sp. Y412MC10] gi|328937981|gb|EGG34381.1| glutamate racemase [Paenibacillus sp. HGF5] Length = 268 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +I I DSG+GGL V +++ +P IY D PYG ++ + + Sbjct: 1 MQQAIAILDSGVGGLTVAKEVMRQLPREKIIYFGDTARAPYGPRTPEEVRLFTEQIVDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + +Y P + VIACNTA D + S P + +G + P + A + T++G + ++ T Sbjct: 61 I-QYDPKMIVIACNTATAAALDYISSKVP-VPVIGVIHPGARAAISATKTGHVGVIGTVG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + + L VE K +++ + G + Sbjct: 119 TIGSGAYTAALKQLSPYIGVESQACPELVPLVEHGLFRSKDSLQVVERSLRGI----KDT 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHA 249 D ++L CTHYP +++ + + V + ++D AR +L + + H Sbjct: 175 SIDCLILGCTHYPFLMNTIQTVMGPNVKLISSADETAREVSTILYDKGQLASSMEGPVHQ 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G P+I + G Sbjct: 235 FFCTGDPEIFQSIATEWLG 253 >gi|312868338|ref|ZP_07728538.1| glutamate racemase [Streptococcus parasanguinis F0405] gi|311096083|gb|EFQ54327.1| glutamate racemase [Streptococcus parasanguinis F0405] Length = 264 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K + V+ACNTA ++ +E++ + LG + P A T Sbjct: 53 YTWQMVNFLLTK-NVKMIVLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I S + ++ VE ++ KK + Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMEVSSLACPKFVPLVESN----ELASSVTKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ETLKPLVGK-VDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225 Query: 242 TR--VFDDHALFLSGKPDIAMRRLMQGF 267 +R + H + + + + Sbjct: 226 SRELLEQTHRFYTTANANSFAAIAEKWL 253 >gi|322387113|ref|ZP_08060724.1| glutamate racemase [Streptococcus infantis ATCC 700779] gi|321142100|gb|EFX37594.1| glutamate racemase [Streptococcus infantis ATCC 700779] Length = 264 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++S + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKSKL-DIPVLGVILPGASAAIKTSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 RIGVIGTPMTVQSDIYRQKIHDLDPNLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPEVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDAGPLQHRFYTTANSHSFAQIGAEWL 253 >gi|293364220|ref|ZP_06610946.1| glutamate racemase [Streptococcus oralis ATCC 35037] gi|307702427|ref|ZP_07639383.1| glutamate racemase [Streptococcus oralis ATCC 35037] gi|291317066|gb|EFE57493.1| glutamate racemase [Streptococcus oralis ATCC 35037] gi|307624009|gb|EFO02990.1| glutamate racemase [Streptococcus oralis ATCC 35037] Length = 264 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAKL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 +R H + + + + Sbjct: 226 SRDAGPLQHRFYTTASSQSFAQIGEEWL 253 >gi|331086725|ref|ZP_08335802.1| glutamate racemase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330409891|gb|EGG89326.1| glutamate racemase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 278 Score = 315 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 18/268 (6%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKI+N K I +FDSG+GGL V +++ +P +Y D PYG+ + + Sbjct: 1 MKIEN-----KKDMPIGVFDSGVGGLTVAREIMRQLPNESIVYFGDTARVPYGSKSETTI 55 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + +L K + VIACNTA L D +R F + +G V P + A T Sbjct: 56 IRYSRQIIRFLLTK-EVKAIVIACNTASALALDAVRKEFK-IPIIGVVAPGARAAREETI 113 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I ++ T AT++ LI + Q + + + VEE KI ++ Sbjct: 114 NKKIGVIGTEATVKSEIYKKLIQAEDPQISVSGRACPLFVPLVEEGFAKHKIT----REV 169 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 I+ + D ++L CTHYPL+ R+ + ++ + A + LL Sbjct: 170 IDIYLSDMRESDIDTLILGCTHYPLLRSTIREYMGEKIHLVNPAYETAMDLKRLLEEEEM 229 Query: 240 HQTRVFDDHA------LFLSGKPDIAMR 261 + +D ++S D + Sbjct: 230 LRDTPVNDQEEHGEYSFYVSDAADKFKQ 257 >gi|320325693|gb|EFW81754.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. B076] gi|320327388|gb|EFW83402.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. race 4] gi|330881879|gb|EGH16028.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. race 4] Length = 271 Score = 315 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFI 58 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + ++ L V+ACNTA +R +P +G PA+K AA T+S Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T TL+ + L+ + + + L +E + +I++ + Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLL 173 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 174 LHYVEPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLL 233 Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263 T + + S PD + L Sbjct: 234 ATGTARETMYWSSDIPDNFRKIL 256 >gi|325570406|ref|ZP_08146183.1| glutamate racemase [Enterococcus casseliflavus ATCC 12755] gi|325156616|gb|EGC68793.1| glutamate racemase [Enterococcus casseliflavus ATCC 12755] Length = 277 Score = 315 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 101/259 (38%), Gaps = 10/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P +Y+ D PYG + + +L Sbjct: 10 NRPIGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIAYTWQMTRFLL 69 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 +K + VIACNTA + +E++ ++ +G + P + A +++ I ++ T T Sbjct: 70 EK-NIKMLVIACNTATAVALEEIKEKL-AIPVIGVILPGSRAAVKASKNQRIGVIGTNGT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + ++ VE + KK + + KR Sbjct: 128 IKSDSYKRALHGKAPHASVVSLACPKFVPIVESK----QYHSSVAKKIVAETLRPLKNKR 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDH 248 D ++L CTHYPL+ + + + +D+ LL + T Q H Sbjct: 184 LDTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPQH 243 Query: 249 ALFLSGKPDIAMRRLMQGF 267 A F +G P I Sbjct: 244 AFFTTGSPKIFDEIANDWL 262 >gi|298485684|ref|ZP_07003763.1| Glutamate racemase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159710|gb|EFI00752.1| Glutamate racemase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330988602|gb|EGH86705.1| glutamate racemase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 271 Score = 315 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFI 58 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + ++ L V+ACNTA +R +P +G PA+K AA T+S Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T TL+ + L+ + + + L +E + +I++ + Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLL 173 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 174 LHYVEPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLL 233 Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263 T D + S PD + L Sbjct: 234 ATGDARDTVYWSSDIPDNFRKIL 256 >gi|322391355|ref|ZP_08064825.1| glutamate racemase [Streptococcus peroris ATCC 700780] gi|321145781|gb|EFX41172.1| glutamate racemase [Streptococcus peroris ATCC 700780] Length = 264 Score = 315 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E++S + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKSKL-DIPVLGVILPGASAAIKASQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + +S A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPNLQVESLSCPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDVGPLQHRFYTTANSQSFAQIGAEWL 253 >gi|194397943|ref|YP_002038470.1| glutamate racemase [Streptococcus pneumoniae G54] gi|226707591|sp|B5E1Z3|MURI_STRP4 RecName: Full=Glutamate racemase gi|194357610|gb|ACF56058.1| glutamate racemase [Streptococcus pneumoniae G54] Length = 264 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRKKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253 >gi|260460843|ref|ZP_05809093.1| glutamate racemase [Mesorhizobium opportunistum WSM2075] gi|259033420|gb|EEW34681.1| glutamate racemase [Mesorhizobium opportunistum WSM2075] Length = 275 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 131/259 (50%), Positives = 183/259 (70%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF+ +L Sbjct: 3 DQPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILELFARLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D++ PV+SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T+ Sbjct: 63 DRFSPVISVIACNTASTLVIDALRDRFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E +G+RT Sbjct: 123 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEAYMREGFVDEEAVRAEITPCFMEHDGRRT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F Sbjct: 183 DIVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFT 242 Query: 253 SGKPDIAMRRLMQGFGLKS 271 SGK D A+ RLMQGFGL + Sbjct: 243 SGKADFAVSRLMQGFGLVA 261 >gi|23099563|ref|NP_693029.1| glutamate racemase [Oceanobacillus iheyensis HTE831] gi|29839537|sp|Q8EPJ4|MURI_OCEIH RecName: Full=Glutamate racemase gi|22777793|dbj|BAC14064.1| glutamate racemase [Oceanobacillus iheyensis HTE831] Length = 274 Score = 314 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + SI + DSG+GGL V+ ++ +P+ IY+ D PYG +++ + + Sbjct: 1 MDKSIGVIDSGVGGLTVVHELMRQLPKEQLIYLGDTARCPYGPRSKEEVRQFTWEMVDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L K + V+ACNTA +L+ + +G + P + A T + + ++ T Sbjct: 61 LTK-NIKMLVVACNTATAFTLKDLKEQL-DIPVIGVIQPGARAAIKSTTNNQVGVIGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ S + S + ++ VE + + + + K Sbjct: 119 TISSGAYSQALEKIKSDIQVSGLACPPFVPMVERGVLSGPEAKAVVSEALRPF---SNNK 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA 249 D ++L CTHYPL+ +++ V + +S+ AR LL + + H Sbjct: 176 EMDTLILGCTHYPLLKSTIQEVMGEEVTVISSSEETARETSTLLDVHQIMNRSDLVPLHQ 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 + +G +I + F Sbjct: 236 FYTTGDLEIFIEIAKTIF 253 >gi|29375697|ref|NP_814851.1| glutamate racemase [Enterococcus faecalis V583] gi|81585411|sp|Q836J0|MURI_ENTFA RecName: Full=Glutamate racemase gi|29343158|gb|AAO80921.1| glutamate racemase [Enterococcus faecalis V583] Length = 273 Score = 314 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 9/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I + DSG+GGL VL++ +P IY+ D PYG + + + +L Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K + VIACNTA + +E+++ P + +G + P + A T++ I ++ T T Sbjct: 64 KKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTKNNKIGVIGTLGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I S + + VE + KK + + K Sbjct: 122 IKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESNQYRSSVA----KKIVAETLQALQLKG 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHA 249 D ++L CTHYPL+ V + + V +D+ LL + T H Sbjct: 178 LDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQPHE 237 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 + +G + G++ Sbjct: 238 FYTTGSAKMFEEIASSWLGIE 258 >gi|15901709|ref|NP_346313.1| glutamate racemase [Streptococcus pneumoniae TIGR4] gi|15903738|ref|NP_359288.1| glutamate racemase [Streptococcus pneumoniae R6] gi|111657289|ref|ZP_01408054.1| hypothetical protein SpneT_02001506 [Streptococcus pneumoniae TIGR4] gi|116516596|ref|YP_817111.1| glutamate racemase [Streptococcus pneumoniae D39] gi|148993339|ref|ZP_01822879.1| glutamate racemase [Streptococcus pneumoniae SP9-BS68] gi|148998745|ref|ZP_01826183.1| glutamate racemase [Streptococcus pneumoniae SP11-BS70] gi|149006464|ref|ZP_01830163.1| glutamate racemase [Streptococcus pneumoniae SP18-BS74] gi|149011254|ref|ZP_01832501.1| glutamate racemase [Streptococcus pneumoniae SP19-BS75] gi|149025005|ref|ZP_01836385.1| glutamate racemase [Streptococcus pneumoniae SP23-BS72] gi|168483413|ref|ZP_02708365.1| glutamate racemase [Streptococcus pneumoniae CDC1873-00] gi|168487311|ref|ZP_02711819.1| glutamate racemase [Streptococcus pneumoniae CDC1087-00] gi|168489841|ref|ZP_02714040.1| glutamate racemase [Streptococcus pneumoniae SP195] gi|168491804|ref|ZP_02715947.1| glutamate racemase [Streptococcus pneumoniae CDC0288-04] gi|168494203|ref|ZP_02718346.1| glutamate racemase [Streptococcus pneumoniae CDC3059-06] gi|168574930|ref|ZP_02720893.1| glutamate racemase [Streptococcus pneumoniae MLV-016] gi|169833125|ref|YP_001695247.1| glutamate racemase [Streptococcus pneumoniae Hungary19A-6] gi|182684824|ref|YP_001836571.1| glutamate racemase [Streptococcus pneumoniae CGSP14] gi|221232616|ref|YP_002511770.1| glutamate racemase [Streptococcus pneumoniae ATCC 700669] gi|225855314|ref|YP_002736826.1| glutamate racemase [Streptococcus pneumoniae JJA] gi|225857468|ref|YP_002738979.1| glutamate racemase [Streptococcus pneumoniae P1031] gi|225859643|ref|YP_002741153.1| glutamate racemase [Streptococcus pneumoniae 70585] gi|225861674|ref|YP_002743183.1| glutamate racemase [Streptococcus pneumoniae Taiwan19F-14] gi|298230339|ref|ZP_06964020.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298503608|ref|YP_003725548.1| glutamate racemase [Streptococcus pneumoniae TCH8431/19A] gi|303254610|ref|ZP_07340712.1| glutamate racemase [Streptococcus pneumoniae BS455] gi|303258827|ref|ZP_07344807.1| glutamate racemase [Streptococcus pneumoniae SP-BS293] gi|303261990|ref|ZP_07347936.1| glutamate racemase [Streptococcus pneumoniae SP14-BS292] gi|303263853|ref|ZP_07349775.1| glutamate racemase [Streptococcus pneumoniae BS397] gi|303265612|ref|ZP_07351511.1| glutamate racemase [Streptococcus pneumoniae BS457] gi|303269880|ref|ZP_07355623.1| glutamate racemase [Streptococcus pneumoniae BS458] gi|307068494|ref|YP_003877460.1| glutamate racemase [Streptococcus pneumoniae AP200] gi|307128076|ref|YP_003880107.1| glutamate racemase [Streptococcus pneumoniae 670-6B] gi|307710764|ref|ZP_07647192.1| glutamate racemase [Streptococcus mitis SK321] gi|54037869|sp|P63641|MURI_STRR6 RecName: Full=Glutamate racemase gi|54041262|sp|P63640|MURI_STRPN RecName: Full=Glutamate racemase gi|122278043|sp|Q04IS7|MURI_STRP2 RecName: Full=Glutamate racemase gi|229486278|sp|B1I891|MURI_STRPI RecName: Full=Glutamate racemase gi|229486279|sp|B2ISX9|MURI_STRPS RecName: Full=Glutamate racemase gi|254766126|sp|C1C9E7|MURI_STRP7 RecName: Full=Glutamate racemase gi|254766127|sp|B8ZNI5|MURI_STRPJ RecName: Full=Glutamate racemase gi|254766129|sp|C1CGA5|MURI_STRZJ RecName: Full=Glutamate racemase gi|254766130|sp|C1CMJ1|MURI_STRZP RecName: Full=Glutamate racemase gi|254766131|sp|C1CTB1|MURI_STRZT RecName: Full=Glutamate racemase gi|14973385|gb|AAK75953.1| glutamate racemase [Streptococcus pneumoniae TIGR4] gi|15459371|gb|AAL00499.1| Glutamate racemase [Streptococcus pneumoniae R6] gi|116077172|gb|ABJ54892.1| glutamate racemase [Streptococcus pneumoniae D39] gi|147755439|gb|EDK62488.1| glutamate racemase [Streptococcus pneumoniae SP11-BS70] gi|147761762|gb|EDK68725.1| glutamate racemase [Streptococcus pneumoniae SP18-BS74] gi|147764244|gb|EDK71175.1| glutamate racemase [Streptococcus pneumoniae SP19-BS75] gi|147928106|gb|EDK79125.1| glutamate racemase [Streptococcus pneumoniae SP9-BS68] gi|147929498|gb|EDK80493.1| glutamate racemase [Streptococcus pneumoniae SP23-BS72] gi|168995627|gb|ACA36239.1| glutamate racemase [Streptococcus pneumoniae Hungary19A-6] gi|172043246|gb|EDT51292.1| glutamate racemase [Streptococcus pneumoniae CDC1873-00] gi|182630158|gb|ACB91106.1| glutamate racemase [Streptococcus pneumoniae CGSP14] gi|183569790|gb|EDT90318.1| glutamate racemase [Streptococcus pneumoniae CDC1087-00] gi|183571721|gb|EDT92249.1| glutamate racemase [Streptococcus pneumoniae SP195] gi|183573878|gb|EDT94406.1| glutamate racemase [Streptococcus pneumoniae CDC0288-04] gi|183575767|gb|EDT96295.1| glutamate racemase [Streptococcus pneumoniae CDC3059-06] gi|183578940|gb|EDT99468.1| glutamate racemase [Streptococcus pneumoniae MLV-016] gi|220675078|emb|CAR69656.1| glutamate racemase [Streptococcus pneumoniae ATCC 700669] gi|225720017|gb|ACO15871.1| glutamate racemase [Streptococcus pneumoniae 70585] gi|225723477|gb|ACO19330.1| glutamate racemase [Streptococcus pneumoniae JJA] gi|225725094|gb|ACO20946.1| glutamate racemase [Streptococcus pneumoniae P1031] gi|225728008|gb|ACO23859.1| glutamate racemase [Streptococcus pneumoniae Taiwan19F-14] gi|298239203|gb|ADI70334.1| glutamate racemase [Streptococcus pneumoniae TCH8431/19A] gi|301802572|emb|CBW35333.1| glutamate racemase [Streptococcus pneumoniae INV200] gi|302598322|gb|EFL65366.1| glutamate racemase [Streptococcus pneumoniae BS455] gi|302637073|gb|EFL67562.1| glutamate racemase [Streptococcus pneumoniae SP14-BS292] gi|302640328|gb|EFL70783.1| glutamate racemase [Streptococcus pneumoniae SP-BS293] gi|302640583|gb|EFL70987.1| glutamate racemase [Streptococcus pneumoniae BS458] gi|302644739|gb|EFL74987.1| glutamate racemase [Streptococcus pneumoniae BS457] gi|302646891|gb|EFL77116.1| glutamate racemase [Streptococcus pneumoniae BS397] gi|306410031|gb|ADM85458.1| Glutamate racemase [Streptococcus pneumoniae AP200] gi|306485138|gb|ADM92007.1| glutamate racemase [Streptococcus pneumoniae 670-6B] gi|307617370|gb|EFN96542.1| glutamate racemase [Streptococcus mitis SK321] gi|327390042|gb|EGE88387.1| glutamate racemase [Streptococcus pneumoniae GA04375] gi|332072219|gb|EGI82704.1| glutamate racemase [Streptococcus pneumoniae GA17545] gi|332072704|gb|EGI83187.1| glutamate racemase [Streptococcus pneumoniae GA17570] gi|332073032|gb|EGI83512.1| glutamate racemase [Streptococcus pneumoniae GA41301] gi|332199901|gb|EGJ13976.1| glutamate racemase [Streptococcus pneumoniae GA41317] gi|332200436|gb|EGJ14509.1| glutamate racemase [Streptococcus pneumoniae GA47368] Length = 264 Score = 314 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253 >gi|288553638|ref|YP_003425573.1| glutamate racemase [Bacillus pseudofirmus OF4] gi|288544798|gb|ADC48681.1| glutamate racemase [Bacillus pseudofirmus OF4] Length = 269 Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 107/258 (41%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + + Sbjct: 1 MDRPIGVIDSGLGGLTVAKELMRQLPKEEIVYLGDSARCPYGPRTSEEVRTYTWEMINRL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L++ + VIACNTA ++ +E++ S+ +G V P A T+ ++++ T Sbjct: 61 LEE-NMKMLVIACNTATAVVLEEVKKEL-SIPVVGVVHPGATSALKVTKKDHVAVIGTVG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + S + + ++ VE + +K+ +E + + Sbjct: 119 TIESGAYEKALKSINHEVKVESLACPPFVPLVERGVFEGAEADLIVKEVLE----PLQNR 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249 D ++L CTHYPL+ ++ V + + D AR LL N + H Sbjct: 175 GFDTMILGCTHYPLLKDTIQKQMGPDVQLISSGDETAREVSGLLYHNNLLFTDQRKPTHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G D + Sbjct: 235 FFTTGDKDQFKTLADKWL 252 >gi|237651133|ref|ZP_04525385.1| glutamate racemase [Streptococcus pneumoniae CCRI 1974] gi|237820927|ref|ZP_04596772.1| glutamate racemase [Streptococcus pneumoniae CCRI 1974M2] Length = 264 Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +++++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEKIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRKKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253 >gi|222148423|ref|YP_002549380.1| glutamate racemase [Agrobacterium vitis S4] gi|221735411|gb|ACM36374.1| glutamate racemase [Agrobacterium vitis S4] Length = 269 Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 139/257 (54%), Positives = 185/257 (71%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSGIGGL VL++ R LMPE FIY+ADD GFPYGNWE+ LK R++ LF+ +L Sbjct: 9 KPILVFDSGIGGLTVLREARVLMPERGFIYIADDAGFPYGNWEEEPLKARIVSLFASLLA 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +Y P ++AC+TAFTL LR FP M F+G VPAIK AA ++SGLIS+L+TP T++ Sbjct: 69 QYDPEAVIVACSTAFTLAGAALREAFPGMRFIGTVPAIKPAAERSRSGLISVLATPGTVK 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ SQC ++LV S LA E Y G ++E +K EI CFIEK+G +TD Sbjct: 129 RAYTRDLIQSFASQCEVNLVGSQHLARLAEAYIRGESVEEAVLKAEIAPCFIEKQGAKTD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + +VFR+L+PWPVDWLD +++IAR+AR L+P ++ D A+F S Sbjct: 189 IVVLACTHYPFLANVFRKLAPWPVDWLDPAEAIARQARRLVPVVDEGAHSDDYDFAVFTS 248 Query: 254 GKPDIAMRRLMQGFGLK 270 G+P + RLMQGFGL+ Sbjct: 249 GQPVFSTHRLMQGFGLR 265 >gi|253573241|ref|ZP_04850584.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846769|gb|EES74774.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14] Length = 272 Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I I DSG+GGL V +++ +P IY D PYG ++ + ++ Sbjct: 4 QQAIAILDSGVGGLTVCKEVMRQLPREKIIYFGDTARAPYGPRSPEEVRLFTEQIVDYLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ P + VIACNTA D +++ + +G + P + A + T++G + ++ T T Sbjct: 64 -QFHPKMIVIACNTATAAALDFIKAKV-DIPVIGVIHPGARAAISETKTGKVGVIGTVGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + + Q I + VE K E +E E + + Sbjct: 122 IRSGAYTVALRELNPQTEIVSEACPEFVPLVEHGLYETK----EALHVVERSLREMKKQP 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250 D ++L CTHYP + +++ V + ++D AR +L + + H Sbjct: 178 MDCLILGCTHYPFLKDPIQRVMGPNVKLISSADETAREISTILHQRGCLARGNGTPVHQF 237 Query: 251 FLSGKPDIAMRRLMQGFG 268 F SG ++ + Q G Sbjct: 238 FCSGDAEMFRKIARQWLG 255 >gi|205374388|ref|ZP_03227186.1| glutamate racemase [Bacillus coahuilensis m4-4] Length = 264 Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 8/262 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I I DSG+GGL V++++ +P YV D PYG ++ L + + Sbjct: 1 MNKPIGIIDSGVGGLTVVKEVMRQLPNERIYYVGDTARCPYGPRHTDEVRTFTWELTNYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L +Y + +IACNTA ++ DE++ S+ +G + P + A +T+SG I +L T Sbjct: 61 L-QYDIKMLIIACNTATAVVLDEIKHKL-SIPVIGVIDPGARAAIKHTKSGRIGVLGTNV 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + S VE E +K ++ + Sbjct: 119 TVKSKAYDRALRTINRDVQVWSKSCPKFVPLVESGEYTGSFAEKIVKNTLQS----MKQH 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249 D I+L CTHYPL+ + + + V + + D AR A +L + H Sbjct: 175 PLDTIILGCTHYPLLEPIIQDVMGSNVKVISSGDETAREASAILDYQELIYAGDTKPAHR 234 Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271 F +G ++ ++ Sbjct: 235 FFTTGSVELFKNIAESWLEFEA 256 >gi|307709763|ref|ZP_07646214.1| glutamate racemase [Streptococcus mitis SK564] gi|301794843|emb|CBW37299.1| glutamate racemase [Streptococcus pneumoniae INV104] gi|307619465|gb|EFN98590.1| glutamate racemase [Streptococcus mitis SK564] gi|332201291|gb|EGJ15362.1| glutamate racemase [Streptococcus pneumoniae GA47901] Length = 264 Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253 >gi|52786718|ref|YP_092547.1| glutamate racemase [Bacillus licheniformis ATCC 14580] gi|319647248|ref|ZP_08001470.1| RacE protein [Bacillus sp. BT1B_CT2] gi|52349220|gb|AAU41854.1| RacE [Bacillus licheniformis ATCC 14580] gi|317390595|gb|EFV71400.1| RacE protein [Bacillus sp. BT1B_CT2] Length = 272 Score = 314 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L I + DSG+GGL V +++ +P+ IY+ D PYG + + + + + Sbjct: 2 LDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYLGDTKRCPYGPRDRKEVLSYTWEMTNYL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L ++ + VIACNTA + +E+ ++ +G V P + A T++ I ++ T Sbjct: 62 LSRHHIKMLVIACNTATAIALEEISREV-AIPVIGVVQPGARTAIKVTENQRIGVIGTEN 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + ++ + VE K ++ + + Sbjct: 121 TIKSGAYEEALLSLNGDLTVENLACPMFVPFVESG----KFLDETADEIVRTSLHPLRDS 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA 249 D ++L CTHYP++ ++ V+ + + D AR +L T +H Sbjct: 177 SIDTLILGCTHYPILKEPIQRYMGERVNIISSGDETAREVSTILSYNGLLSKTAEPPEHL 236 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 +G+ + FG + Sbjct: 237 FLTTGERARFTKIANDWFGYE 257 >gi|222054462|ref|YP_002536824.1| glutamate racemase [Geobacter sp. FRC-32] gi|221563751|gb|ACM19723.1| glutamate racemase [Geobacter sp. FRC-32] Length = 283 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 121/257 (47%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I +FDSG+GGL VL+++ ++P+ IY+ D PYG + + + S ++ Sbjct: 4 KAIGVFDSGVGGLTVLKEIMKVLPQEDTIYLGDTARVPYGTKSPETVVRYSRQITSFLVS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNTA + L+ F S+ +G + P ++AAA T+SG + ++ T T+ Sbjct: 64 R-DIKMLVVACNTASAVSLTALKKEF-SIPIVGVIEPGARRAAAVTRSGKVGVIGTAGTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + I + + + EE +I + ++G + + Sbjct: 122 KSSAYAKAIKRINPGIEVVTRACPLFVPLAEEGWIDNEIARLTAQTYLKG----LKEESV 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 D +VL CTHYP++ + ++ V +D+++ A +L + + + T +H F Sbjct: 178 DTLVLGCTHYPILKGIIAEVMGDGVTLVDSAEETAFTVAEILGKKSLLRPTSEKGNHHFF 237 Query: 252 LSGKPDIAMRRLMQGFG 268 ++ P +R + G Sbjct: 238 VTDVPAGFIRVGSRFLG 254 >gi|257482010|ref|ZP_05636051.1| glutamate racemase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008869|gb|EGH88925.1| glutamate racemase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 271 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFI 58 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + ++ L V+ACNTA +R +P +G PA+K AA T+S Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T TL+ + L+ + + + L +E + +I++ + Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPKIRQLL 173 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 174 LHYVEPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLL 233 Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263 T D + S PD + L Sbjct: 234 ATGDARDTVYWSSDIPDNFRKIL 256 >gi|104780103|ref|YP_606601.1| glutamate racemase [Pseudomonas entomophila L48] gi|166231049|sp|Q1IEW8|MURI_PSEE4 RecName: Full=Glutamate racemase gi|95109090|emb|CAK13787.1| glutamate racemase [Pseudomonas entomophila L48] Length = 265 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 5/255 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I + DSG+GGL VL +++ L+P +YVAD PYG +++RL + Sbjct: 1 MNERSAPIGVMDSGVGGLSVLAEIQRLLPNETLLYVADSGHVPYGEKSPDYIRQRLRHIA 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + ++ + V+ACNTA +LR+ +P +G PA+K AAA T+SG++ +L+T Sbjct: 61 GFLREQGAKAM-VLACNTATVATVADLRALYPDWPLVGMEPAVKPAAAATRSGVVGVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL+ + L+ + S + L +E + +++ + G Sbjct: 120 TGTLQSAKFAALLDRFASDVRVITQPCPGLVECIEAG----DLTSPALRQLLAGYVQPLL 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 + D ++L CTHYP + + + P V +D ++AR+ + LL + + Sbjct: 176 AQGCDTLILGCTHYPFLRPMLADMVPADVAIIDTGAAVARQLQRLLGERDLLADGPARET 235 Query: 249 ALFLSGKPDIAMRRL 263 A + S PD + L Sbjct: 236 AFWTSADPDSLKKIL 250 >gi|315302795|ref|ZP_07873560.1| glutamate racemase [Listeria ivanovii FSL F6-596] gi|313628832|gb|EFR97200.1| glutamate racemase [Listeria ivanovii FSL F6-596] Length = 266 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + +++ + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQIYYLGDTARCPYGPRDKEEVRQFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ + VIACNTA ++R+ + +G + P + A T++ I +L T Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIRAKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + ++ S VE + K KK + + + Sbjct: 119 TVESMAYPRALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 + D ++L CTHYPL+ + V +++ + A LL N + H Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDDVAVINSGEETASEVSALLDYHNLLDASDKEIQHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 235 FFTTGSTQIFQDIAXXWL 252 >gi|330887861|gb|EGH20522.1| glutamate racemase [Pseudomonas syringae pv. mori str. 301020] Length = 271 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTTEFI 58 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + ++ L V+ACNTA +R +P +G PA+K AA T+S Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T TL+ + L+ + + + L +E + +I++ + Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLL 173 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 174 LHYVEPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLL 233 Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263 T D + S PD + L Sbjct: 234 ATGDARDTVYWSSDIPDNFRKIL 256 >gi|327190530|gb|EGE57624.1| glutamate racemase protein (required for biosynthesis of D-glutamate and peptidoglycan) [Rhizobium etli CNPAF512] Length = 266 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 141/258 (54%), Positives = 188/258 (72%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L Sbjct: 9 KPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLT 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+ ++TD Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P I D A+F S Sbjct: 189 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLIADAVHPDNFDFAVFTS 248 Query: 254 GKPDIAMRRLMQGFGLKS 271 G+ D A RRLMQGFGL++ Sbjct: 249 GQQDFATRRLMQGFGLRA 266 >gi|13470360|ref|NP_101926.1| glutamate racemase [Mesorhizobium loti MAFF303099] gi|14021099|dbj|BAB47712.1| glutamate racemase [Mesorhizobium loti MAFF303099] Length = 276 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 131/258 (50%), Positives = 179/258 (69%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF +L Sbjct: 17 DQPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILDLFVKLL 76 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D++ P +SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T+ Sbjct: 77 DRFAPAISVIACNTASTLVIDALRERFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTV 136 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E EG RT Sbjct: 137 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEVYMREGFVDEEAVRAEIAPCFMEHEGLRT 196 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F Sbjct: 197 DIVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFT 256 Query: 253 SGKPDIAMRRLMQGFGLK 270 SGK D A+ RLMQGFGL Sbjct: 257 SGKTDFAIGRLMQGFGLS 274 >gi|222086155|ref|YP_002544687.1| glutamate racemase [Agrobacterium radiobacter K84] gi|221723603|gb|ACM26759.1| glutamate racemase [Agrobacterium radiobacter K84] Length = 266 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 138/258 (53%), Positives = 190/258 (73%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG+WE+ AL++R++ LF+ +L Sbjct: 9 KPVLMFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGDWEEQALRERIVGLFAKLLA 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 69 DYDPEICIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ +QCH+ LV S LA E Y G + +D + E+ CF+E +G++TD Sbjct: 129 RAYTRDLIQSFATQCHVRLVGSENLARIAEAYIRGGTVSDDAVLAEVGQCFVEMDGRKTD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P++ D A+F S Sbjct: 189 IVVLACTHYPFMANIFRRLAPWPVDWLDPAEAIARRARSLVPQVADAVHPDTYDFAVFTS 248 Query: 254 GKPDIAMRRLMQGFGLKS 271 G PD RRLMQGFGL++ Sbjct: 249 GTPDFPTRRLMQGFGLRA 266 >gi|86357929|ref|YP_469821.1| glutamate racemase [Rhizobium etli CFN 42] gi|86282031|gb|ABC91094.1| glutamate racemase (required for biosynthesis of D-glutamate and peptidoglycan) protein [Rhizobium etli CFN 42] Length = 266 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 141/258 (54%), Positives = 188/258 (72%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +L+FDSGIGGL VL++ R LMPE F+YVADD GFPYG WE+ ALK+R++ LF +L Sbjct: 9 KPVLVFDSGIGGLTVLREARVLMPERGFVYVADDAGFPYGGWEEQALKERIIGLFGKLLQ 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 69 DYHPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG +TD Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDEAVLAEIDQCFVEKEGYKTD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P + D A+F S Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTS 248 Query: 254 GKPDIAMRRLMQGFGLKS 271 G PD A RRLMQGFGL++ Sbjct: 249 GNPDFATRRLMQGFGLRA 266 >gi|71733288|ref|YP_273271.1| glutamate racemase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71553841|gb|AAZ33052.1| glutamate racemase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 271 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 10/263 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFI 58 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + ++ L V+ACNTA +R +P +G PA+K AA T+S Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T TL+ + L+ + + + L +E + +I++ + Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRRLL 173 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 D I+L CTHYP + + R++ P V +D ++AR+ + LL R + Sbjct: 174 LHYVEPLLAACCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLL 233 Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263 T + + S PD + L Sbjct: 234 ATGTARETMYWSSDIPDNFRKIL 256 >gi|229543635|ref|ZP_04432695.1| glutamate racemase [Bacillus coagulans 36D1] gi|229328055|gb|EEN93730.1| glutamate racemase [Bacillus coagulans 36D1] Length = 269 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V ++M +P YV D PYG +KK + + Sbjct: 1 MNAPIGVIDSGVGGLTVAKEMMRQLPNETIYYVGDTARCPYGPRPVEEVKKFTWQMIRFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +DK Q + VIACNTA +I DE+R + LG + P + A +T++ I +L T Sbjct: 61 MDK-QIKMLVIACNTATAVILDEVREELK-IPVLGVIYPGARAALKHTKNFRIGVLGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + I ++ VE I KK + + Sbjct: 119 TIKSQAYERALKSINKKVKITALACPKFVPLVESGQYNSPIA----KKIVAETLYPIQNC 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHA 249 D ++L CTHYPL+ + + + V + + + AR LL + H Sbjct: 175 GIDTVILGCTHYPLLGPIIKNVMGAGVSVISSGEETAREVSTLLYFHDLFNMEDTRQKHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 + +G I Sbjct: 235 FYTTGSSKIFAALASDWL 252 >gi|218463622|ref|ZP_03503713.1| glutamate racemase [Rhizobium etli Kim 5] Length = 266 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 141/258 (54%), Positives = 190/258 (73%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+ Sbjct: 9 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLN 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+E++G++TD Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDALSDDAVLAEIDQCFVERDGQKTD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P I D A+F S Sbjct: 189 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLIADAVHPDNFDFAMFTS 248 Query: 254 GKPDIAMRRLMQGFGLKS 271 G+ D A RRLMQGFGLK+ Sbjct: 249 GQQDFATRRLMQGFGLKA 266 >gi|317129840|ref|YP_004096122.1| glutamate racemase [Bacillus cellulosilyticus DSM 2522] gi|315474788|gb|ADU31391.1| glutamate racemase [Bacillus cellulosilyticus DSM 2522] Length = 279 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V+ ++ +P+ IY+ D PYG + ++K + + Sbjct: 1 MDRPIGVIDSGVGGLTVVSELIRQLPKEEIIYIGDTARCPYGPRPESEVRKYTWEMIDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L K + VIACNTA ++ +E + P + +G + P A T++ + ++ T Sbjct: 61 LLK-DIKMLVIACNTATAVVLEEAKQQLP-IPVVGVIHPGTIAALKVTKTDHVGVIGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + ++ L VE DE + ++ Sbjct: 119 TINSGAYERELTMINHEVKVESLACPNLVPLVERGL----FSSDEASEIVKESLAPILST 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249 R D ++L CTHYPL+ V R+++ V+ + + D AR LL + HA Sbjct: 175 RIDSLILGCTHYPLLAPVIREIAGEKVEIICSGDETAREVSALLYHQELLFKEERIPKHA 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 + +G D+ + Q Sbjct: 235 FYSTGSSDMFEQIAKQWL 252 >gi|307707605|ref|ZP_07644086.1| glutamate racemase [Streptococcus mitis NCTC 12261] gi|307616318|gb|EFN95510.1| glutamate racemase [Streptococcus mitis NCTC 12261] Length = 264 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 109/268 (40%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVHSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253 >gi|148262569|ref|YP_001229275.1| glutamate racemase [Geobacter uraniireducens Rf4] gi|146396069|gb|ABQ24702.1| glutamate racemase [Geobacter uraniireducens Rf4] Length = 288 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 6/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ +P+ IY+ D PYG+ + + + S ++ Sbjct: 13 KAIGIFDSGVGGLTVLKEIIKTLPQEDTIYLGDTARVPYGSKSPETVTRYSRQITSFLVQ 72 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + V+ACNTA + L+ FP P ++AA+ T+SG + ++ T T++ Sbjct: 73 R-DIKMLVVACNTASAVSLAALKKEFPIPIVGVIEPGARRAASVTRSGKVGVIGTAGTIK 131 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + I + + + + EE ++ + + + + D Sbjct: 132 SSAYAKAIKRINPEIEVVTRACPLFVPLAEEGWVDNEVA----RLTAQAYLQGVKEEGVD 187 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252 +VL CTHYP++ + ++ V +D+++ A +L + + +H F+ Sbjct: 188 TLVLGCTHYPILKGIIAEVMGGGVTLVDSAEETAFTVAEILRGKALLRPSSEKGNHHFFV 247 Query: 253 SGKPDIAMRRLMQGFG 268 + P +R + G Sbjct: 248 TDVPAGFIRVGNRFLG 263 >gi|229006826|ref|ZP_04164459.1| Glutamate racemase [Bacillus mycoides Rock1-4] gi|228754448|gb|EEM03860.1| Glutamate racemase [Bacillus mycoides Rock1-4] Length = 265 Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 115/259 (44%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + + Sbjct: 2 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEYL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + VIACNTA ++ +E++ + +G + P + A T + + I+ T Sbjct: 62 LA-LDIKMLVIACNTATAVVLEEMQKQLK-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 TVKSGAYEDALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKNT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 176 EIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 235 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +GK D+ + FG Sbjct: 236 FLTTGKIDLFKEIASKWFG 254 >gi|11386940|sp|Q9L4V5|MURI_CARST RecName: Full=Glutamate racemase gi|8102037|gb|AAF72713.1|AF263927_1 glutamate racemase [Carnobacterium sp. St2] Length = 268 Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 104/259 (40%), Gaps = 10/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I DSG+GGL V+++ +P YV D PYG + ++K + +L Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEDQVRKFTWEMTHFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 DK + VIACNTA +++ ++ +G + P + A T + I ++ T T Sbjct: 63 DK-NIKMLVIACNTATAAALKDIKKKL-AIPVIGVILPGSRAAIKATHTNRIGVIGTEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +IHS ++ + ++ VE I KK + + + Sbjct: 121 VKSNQYKKMIHSKDTKALVTSLACPKFVPLVESNEYSSAIA----KKVVAETLRPLKNEG 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDH 248 D ++L CTHYPL+ + + V +D+ +L N Q + + Sbjct: 177 LDTLILGCTHYPLLRPIIQNTLGDSVTLIDSGAETVSEVSTILDYFNLAVDSQNKEKAER 236 Query: 249 ALFLSGKPDIAMRRLMQGF 267 + +G + + Sbjct: 237 NFYTTGSSQMFHAIASEWL 255 >gi|39998014|ref|NP_953965.1| glutamate racemase [Geobacter sulfurreducens PCA] gi|39984959|gb|AAR36315.1| glutamate racemase [Geobacter sulfurreducens PCA] gi|298506955|gb|ADI85678.1| glutamate racemase [Geobacter sulfurreducens KN400] Length = 272 Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 6/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ ++P+ IY+ D PYG + + + + S ++ Sbjct: 4 KAIGIFDSGVGGLTVLKEIIKVLPQEDTIYLGDTARVPYGTKSPETVTRYSLEIASFLVK 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L V+ACNTA + L P P ++A A T++G + ++ T T+R Sbjct: 64 R-DIKLLVVACNTASAASLEALTERLPIPVVGVIEPGARRAVATTRTGKVGVIGTEGTIR 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + I + + + + EE ++ + + G + D Sbjct: 123 SSAYAKAIKRLNPEVEVITRACPLFVPLAEEGWTDNEVARLTARTYLAG----LREQGVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252 IVL CTHYPL+ V + V +D+++ AR +L + + +H F+ Sbjct: 179 TIVLGCTHYPLLKRVIGETVGEDVRLVDSAEETARTVADILRGRDLLRPDGEQGNHHFFV 238 Query: 253 SGKPDIAMRRLMQGFG 268 + P +R + G Sbjct: 239 TDVPAGFIRVGNRFIG 254 >gi|289167204|ref|YP_003445471.1| glutamate racemase, COG0796 [Streptococcus mitis B6] gi|288906769|emb|CBJ21603.1| glutamate racemase, COG0796 [Streptococcus mitis B6] Length = 264 Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 109/268 (40%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVESDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDARPLHHRFYTTASSQSFAQIGEEWL 253 >gi|228993222|ref|ZP_04153143.1| Glutamate racemase [Bacillus pseudomycoides DSM 12442] gi|228999271|ref|ZP_04158851.1| Glutamate racemase [Bacillus mycoides Rock3-17] gi|228760468|gb|EEM09434.1| Glutamate racemase [Bacillus mycoides Rock3-17] gi|228766548|gb|EEM15190.1| Glutamate racemase [Bacillus pseudomycoides DSM 12442] Length = 271 Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 115/259 (44%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + + Sbjct: 8 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEYL 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + VIACNTA ++ +E++ + +G + P + A T + + I+ T Sbjct: 68 LA-LDIKMLVIACNTATAVVLEEMQKQLK-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 125 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + S ++ + ++ VE ++ + +++ ++ + Sbjct: 126 TVKSGAYEDALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKNT 181 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 182 EIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 241 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +GK D+ + FG Sbjct: 242 FLTTGKIDLFKEIASKWFG 260 >gi|209549543|ref|YP_002281460.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535299|gb|ACI55234.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 266 Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 143/258 (55%), Positives = 187/258 (72%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF+ +L Sbjct: 9 KPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFAKLLA 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T+R Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMIFVGTVPAIKPAAERTRSGLVSVLATPGTVR 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+G +TD Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDGHKTD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P D A+F S Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPAAADAVHPDNFDFAVFTS 248 Query: 254 GKPDIAMRRLMQGFGLKS 271 G D A RRLMQGFGL++ Sbjct: 249 GHQDFATRRLMQGFGLRA 266 >gi|325663116|ref|ZP_08151566.1| glutamate racemase [Lachnospiraceae bacterium 4_1_37FAA] gi|325470570|gb|EGC73800.1| glutamate racemase [Lachnospiraceae bacterium 4_1_37FAA] Length = 286 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 109/260 (41%), Gaps = 13/260 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E K I +FDSG+GGL V +++ +P +Y D PYG+ + + + + Sbjct: 12 ENKKDMPIGVFDSGVGGLTVAREIMRQLPNESIVYFGDTARVPYGSKSETTIIRYSRQII 71 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 +L K + VIACNTA L D +R F + +G V P + A T + I ++ Sbjct: 72 RFLLTK-EVKAIVIACNTASALALDAVRKEFK-IPIIGVVAPGARAAREETINKKIGVIG 129 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++ LI + Q + + + VEE KI ++ I+ + Sbjct: 130 TEATVKSEIYKKLIQAEDPQISVSGRACPLFVPLVEEGFAKHKIT----REVIDIYLSDM 185 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT----- 242 D ++L CTHYPL+ R+ + ++ + A + LL + Sbjct: 186 RESDIDTLILGCTHYPLLRSTIREYMGEKIHLVNPAYETAMDLKRLLEEEEMLRDAPVNG 245 Query: 243 -RVFDDHALFLSGKPDIAMR 261 +++ ++S D + Sbjct: 246 QEEHGEYSFYVSDAADKFKQ 265 >gi|148989674|ref|ZP_01821006.1| glutamate racemase [Streptococcus pneumoniae SP6-BS73] gi|147924991|gb|EDK76073.1| glutamate racemase [Streptococcus pneumoniae SP6-BS73] Length = 264 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGAKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253 >gi|319789116|ref|YP_004150749.1| glutamate racemase [Thermovibrio ammonificans HB-1] gi|317113618|gb|ADU96108.1| glutamate racemase [Thermovibrio ammonificans HB-1] Length = 262 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 17/261 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D+ P I +FDSG+GGL VL+ +R L+P+ + IY D PYG + K Sbjct: 1 MDDRP--------IGVFDSGVGGLTVLKALRELLPDENLIYFGDTARVPYGTKSPKTIIK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + +L+ Y + V+ACNT+ + L+ FP P K+A T + Sbjct: 53 FSIQN-TKLLESYGVKMVVVACNTSSAHALEILQEEFPFPVVGVVEPGAKEAVKSTDNRR 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + ++ T AT++ I S C + + + +EE + + ++ Sbjct: 112 VGVIGTEATVKSEAYRKAIVSLDPFCTVFQKACPLFVPLIEEGWLKDPVTLEVARR---- 167 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 E + D +VL CTHYPLI V ++ P + +D+++++AR + LLP + Sbjct: 168 YLGEFKEFNVDTLVLGCTHYPLIKEVIGEVLP-GIRLVDSAEAVAREVKRLLPYR---RK 223 Query: 243 RVFDDHALFLSGKPDIAMRRL 263 + +S K + R Sbjct: 224 GSGGAIKVLVSDKTERFERIA 244 >gi|110633622|ref|YP_673830.1| glutamate racemase [Mesorhizobium sp. BNC1] gi|110284606|gb|ABG62665.1| glutamate racemase [Chelativorans sp. BNC1] Length = 274 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 129/257 (50%), Positives = 182/257 (70%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + IL FDSGIGGL V+++ R L+PE+ ++YVADD FPYG WE+ AL+ RL+ LF ++ Sbjct: 8 SPILFFDSGIGGLSVVKEARVLLPEHPYVYVADDAAFPYGAWEEGALRARLVELFGSLIA 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ P L VIACNTA TL +LR+ +PS F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 68 RFAPSLIVIACNTASTLAIADLRAAYPSQLFVGTVPAIKPAAERTRSGLVSVLATPGTVK 127 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI +Y ++CH+ LV S LAS E+Y + E+ ++KEIE CF+E++G+RTD Sbjct: 128 RQYTRDLISAYAAKCHVRLVGSENLASLAEKYMREGFVDEEAVRKEIEPCFMERDGQRTD 187 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP +V+ R+++PWPVDW+D S++IARRA L + D A F S Sbjct: 188 IVVLACTHYPFLVNRMRKMAPWPVDWIDTSEAIARRALTLAETLPPPARPDLPDRACFTS 247 Query: 254 GKPDIAMRRLMQGFGLK 270 G P ++RRL GFG + Sbjct: 248 GNPPASLRRLASGFGFR 264 >gi|307705571|ref|ZP_07642423.1| glutamate racemase [Streptococcus mitis SK597] gi|307620848|gb|EFN99932.1| glutamate racemase [Streptococcus mitis SK597] Length = 264 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 109/268 (40%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A + G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSPGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253 >gi|229087049|ref|ZP_04219201.1| Glutamate racemase [Bacillus cereus Rock3-44] gi|228696242|gb|EEL49075.1| Glutamate racemase [Bacillus cereus Rock3-44] Length = 265 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + + Sbjct: 2 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + VIACNTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LA-LDIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S ++ + ++ VE + + +++ ++ + Sbjct: 120 TVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESAMAYEVVRETLQ----PLKTT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249 D ++L CTHYP++ V +++ V + + D AR +L ++ DH Sbjct: 176 EIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 235 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +GK D+ + FG Sbjct: 236 FLTTGKIDLFKEIASKWFG 254 >gi|322377632|ref|ZP_08052122.1| glutamate racemase [Streptococcus sp. M334] gi|321281397|gb|EFX58407.1| glutamate racemase [Streptococcus sp. M334] Length = 264 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ I+ + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKINDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDVGPLHHRFYTTASSQSFAQIGEEWL 253 >gi|190892000|ref|YP_001978542.1| glutamate racemase (required for biosynthesis of D-glutamate and peptidoglycan) [Rhizobium etli CIAT 652] gi|190697279|gb|ACE91364.1| glutamate racemase protein (required for biosynthesis of D-glutamate and peptidoglycan) [Rhizobium etli CIAT 652] Length = 266 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 139/258 (53%), Positives = 188/258 (72%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L Sbjct: 9 KPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLT 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++ Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI S+ QC++ LV S LA E Y G + +D + EI+ CF+EK+ ++TD Sbjct: 129 RAYTRDLIQSFAQQCNVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P + D A+F S Sbjct: 189 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTS 248 Query: 254 GKPDIAMRRLMQGFGLKS 271 G+ D A RRLMQGFGL++ Sbjct: 249 GQQDFATRRLMQGFGLRA 266 >gi|20177985|sp|Q98NP9|MURI_RHILO RecName: Full=Glutamate racemase Length = 262 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 131/258 (50%), Positives = 179/258 (69%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF +L Sbjct: 3 DQPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILDLFVKLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D++ P +SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T+ Sbjct: 63 DRFAPAISVIACNTASTLVIDALRERFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E EG RT Sbjct: 123 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEVYMREGFVDEEAVRAEIAPCFMEHEGLRT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F Sbjct: 183 DIVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFT 242 Query: 253 SGKPDIAMRRLMQGFGLK 270 SGK D A+ RLMQGFGL Sbjct: 243 SGKTDFAIGRLMQGFGLS 260 >gi|166368300|ref|YP_001660573.1| glutamate racemase [Microcystis aeruginosa NIES-843] gi|226722987|sp|B0JGW5|MURI_MICAN RecName: Full=Glutamate racemase gi|166090673|dbj|BAG05381.1| glutamate racemase [Microcystis aeruginosa NIES-843] Length = 283 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 8/258 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I +FDSG+GGL VL+++ +P+ +Y AD PYG + + ++ + + + + Sbjct: 7 SPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGTRSKGEIIEFVLEILTWMSE 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + + ++ACNT+ L +E+++ F + LG + P K A + I ++STPAT Sbjct: 67 RR-VKMVIMACNTSSALALEEVQAEFKDLPILGVILPGAKTAVQ--KGKRIGVISTPATA 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I + + +E ++ ++ E Sbjct: 124 KSNAYKQAIQEIDPTAQVWQIPCPEFVPLIEANRIFDPYTTQVAREYLQPLLAE----NI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +V CTHY + V R+L P V +D + S+ R A L + + Sbjct: 180 DTLVYGCTHYRHLSPVLRRLLPSSVRLVDPAASVVRAAEKELELLGLKNPETPLPTNFAV 239 Query: 253 SGKPDIAMRRLMQGFGLK 270 SG PD R Q G Sbjct: 240 SGDPDTFARLSRQWLGFS 257 >gi|38174839|emb|CAD70220.1| glutamate racemase [Microcystis aeruginosa PCC 7806] gi|159027640|emb|CAO89504.1| murI [Microcystis aeruginosa PCC 7806] Length = 270 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 8/258 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I +FDSG+GGL VL+++ +P+ +Y AD PYG + + + + + + Sbjct: 7 SPIGVFDSGVGGLTVLRELYKQLPQESILYFADTARLPYGTRSKGEIIEFVREILTWM-G 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 +++ + ++ACNT+ L +E+R+ F + LG + P K A Q I ++STPAT Sbjct: 66 EHRVKMVIMACNTSSALALEEVRAEFKDLPILGVILPGAKTAVK--QGKRIGVISTPATA 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I + + +E ++ ++ E Sbjct: 124 KSNAYKQAIQEIDPTAQVWQIPCPEFVPLIEANRIFDPYTTQVAREYLQPLLAE----NI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +V CTHY + V R+L P V +D + ++ R A L + + Sbjct: 180 DTLVYGCTHYRHLSPVLRRLLPSSVRLVDPAAAVVRAAEKELELLGLKNPETSLPTNFAV 239 Query: 253 SGKPDIAMRRLMQGFGLK 270 SG PD R Q G Sbjct: 240 SGDPDTFARLSRQWLGFS 257 >gi|118588604|ref|ZP_01546012.1| glutamate racemase [Stappia aggregata IAM 12614] gi|118438590|gb|EAV45223.1| glutamate racemase [Stappia aggregata IAM 12614] Length = 264 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 128/258 (49%), Positives = 174/258 (67%), Gaps = 1/258 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +L FDSG+GGL VL++ R+L+P +YVADD FP G W + LK R++ LF D++ Sbjct: 4 SGPVLFFDSGLGGLTVLREARYLLPYEPLLYVADDAAFPIGRWPEAELKARIVSLFGDLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ P VIACNTAFTL D LR P + F+G VPAIK AA T SGLIS+L+TP T+ Sbjct: 64 AEHGPKAVVIACNTAFTLAGDALREAHPDVPFVGTVPAIKPAAERTSSGLISVLATPGTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 RRTYT +LI S+ SQCH+ LV S +LA E++ G + +D + EI CF+E++GKRT Sbjct: 124 RRTYTRSLIDSFASQCHVRLVGSDMLAELAEKHLRGETVSDDALLPEIADCFLEQDGKRT 183 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALF 251 D++VLACTHYP + + FR+++PWPVDWLD +++IAR+ +L H R D A+F Sbjct: 184 DIVVLACTHYPFLANRFRKIAPWPVDWLDPAEAIARQLVRVLGEEAARHPARNLPDRAIF 243 Query: 252 LSGKPDIAMRRLMQGFGL 269 SG D + RL+ GFGL Sbjct: 244 TSGSKDPGLARLLAGFGL 261 >gi|319784057|ref|YP_004143533.1| glutamate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169945|gb|ADV13483.1| glutamate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 266 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 130/261 (49%), Positives = 175/261 (67%), Gaps = 4/261 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IL+FDSGIGGL VL++ R LMP+ FIYVADD FPYG WE+ AL+ ++ LF +L Sbjct: 3 ERPILMFDSGIGGLTVLREARVLMPDRRFIYVADDAAFPYGAWEEPALRVHILELFGKLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++ P +SVIACNTA TL+ D LR FP F+G VPAIK AA T+SGL+S+L+TP T+ Sbjct: 63 ERFAPAISVIACNTASTLVIDALRDRFPEHPFVGMVPAIKPAAERTRSGLVSVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E++ RT Sbjct: 123 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEIYMREGFVDEEAVRAEITPCFVERDALRT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT----RVFDDH 248 D++VLACTHYP + + R+ +PWPVDWLD +++IARRA LL I+ D Sbjct: 183 DIVVLACTHYPFLANRMRKTAPWPVDWLDPAEAIARRALSLLADIDPSGRGEMLPEGPDL 242 Query: 249 ALFLSGKPDIAMRRLMQGFGL 269 A+F S + D RRLMQGFGL Sbjct: 243 AVFTSKRADFPTRRLMQGFGL 263 >gi|78221768|ref|YP_383515.1| glutamate racemase [Geobacter metallireducens GS-15] gi|123572676|sp|Q39Y84|MURI_GEOMG RecName: Full=Glutamate racemase gi|78193023|gb|ABB30790.1| glutamate racemase [Geobacter metallireducens GS-15] Length = 276 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ +P+ IY D PYG + + + + S ++ Sbjct: 10 KAIGIFDSGVGGLTVLKEIIKALPQEDTIYFGDTARVPYGTKSPETVTRYSLEIASFLVH 69 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA + L+ T S+ +G + P ++AAA T+SG + ++ T T+ Sbjct: 70 R-DIKLLVVACNTASACALEALQQTL-SIPVVGVIEPGARRAAAVTRSGRVGVIGTEGTI 127 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + + I + + + + EE ++ + + G Sbjct: 128 RSSAYAKAIKRINPEVEVVTRACPLFVPLAEEGWTDNEVAHLTARTYLSG----LREAGV 183 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 D +VL CTHYPL+ V + V +D+++ AR +L + T +H F Sbjct: 184 DTLVLGCTHYPLLKRVIGETIGEEVKLVDSAEETARIVAEILRGGELLRPTSEQGNHHYF 243 Query: 252 LSGKPDIAMRRLMQGFG 268 +S P +R + G Sbjct: 244 VSDVPAGFIRVGNRFLG 260 >gi|289434486|ref|YP_003464358.1| hypothetical protein lse_1119 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170730|emb|CBH27270.1| murI [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313633648|gb|EFS00406.1| glutamate racemase [Listeria seeligeri FSL N1-067] gi|313638209|gb|EFS03457.1| glutamate racemase [Listeria seeligeri FSL S4-171] Length = 266 Score = 311 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + +++ + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVRQFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ + VIACNTA ++R+ + +G + P + A T++ I +L T Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIRAKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + ++ S VE + K KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 + D ++L CTHYPL+ + V +++ + A LL N + H Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDDVAVINSGEETASEVSALLDYHNLLDASDKEIQHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 235 FFTTGSTQIFQDIAKDWL 252 >gi|323703720|ref|ZP_08115360.1| glutamate racemase [Desulfotomaculum nigrificans DSM 574] gi|323531308|gb|EGB21207.1| glutamate racemase [Desulfotomaculum nigrificans DSM 574] Length = 268 Score = 311 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 74/244 (30%), Positives = 125/244 (51%), Gaps = 9/244 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V +++R L+P IY AD PYG+ + +++R + + +L Sbjct: 5 APIGIFDSGVGGLSVAREIRRLLPMEDIIYYADSAFCPYGDKDPEVIRRREIAIVDFLLS 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + V+ACNTA + D+LR FP + +G PA+K A A T++G I IL+T T+ Sbjct: 65 QGA-KMIVVACNTASSTGLDDLRKMFP-VPIVGMEPAVKPAVAATRNGKIGILATSVTIA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 ++LI + ++ L RVE ++ + E +K + G ++ D Sbjct: 123 GERLASLIKRFAEHVNVITQPCPGLVERVEHG----QLDDPETEKILAGFLKPILEQQAD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHALF 251 IVL CTHYP + + ++ + +D +++A++ +L N H+ RV + F Sbjct: 179 TIVLGCTHYPFLTPLIEKIVGPNIAIIDTGEAVAKQVSRVLNEHNLAVHEPRVGQE-KFF 237 Query: 252 LSGK 255 SG Sbjct: 238 TSGN 241 >gi|148984333|ref|ZP_01817628.1| glutamate racemase [Streptococcus pneumoniae SP3-BS71] gi|149003922|ref|ZP_01828736.1| glutamate racemase [Streptococcus pneumoniae SP14-BS69] gi|147758062|gb|EDK65067.1| glutamate racemase [Streptococcus pneumoniae SP14-BS69] gi|147923622|gb|EDK74735.1| glutamate racemase [Streptococcus pneumoniae SP3-BS71] gi|301800660|emb|CBW33304.1| glutamate racemase [Streptococcus pneumoniae OXC141] Length = 264 Score = 311 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 109/268 (40%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG + + Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIGE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T++ IH + ++ A VE A + + + + + Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 R H + + + + Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253 >gi|315122618|ref|YP_004063107.1| glutamate racemase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496020|gb|ADR52619.1| glutamate racemase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 271 Score = 311 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 190/263 (72%), Positives = 226/263 (85%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 +K +N I+IFDSGIGGL VLQK+RFLMPEYHFIYVADD GFPYGNWED+ALK+RL+FL Sbjct: 8 VKKNPKNCIMIFDSGIGGLSVLQKVRFLMPEYHFIYVADDSGFPYGNWEDNALKERLLFL 67 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 F+DIL+KY+PVLS++ACNTAFTL+KDELRSTFPSM FLGAVPAIKQA YT +GL+S+LS Sbjct: 68 FADILEKYKPVLSIVACNTAFTLVKDELRSTFPSMLFLGAVPAIKQATVYTSTGLVSVLS 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TPATLRR YT +LI SY S+C I+LVSS LAS E+Y CG +KED I++EI+GCF+EK Sbjct: 128 TPATLRRAYTDDLIRSYASKCQINLVSSTTLASIAEDYTCGKIVKEDGIQREIQGCFLEK 187 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 EG+RTDV+VLACTHYP + H+FR+LSPWPVDWLD S SIARRAR LLP I ++ + DD Sbjct: 188 EGRRTDVVVLACTHYPFMTHIFRRLSPWPVDWLDTSYSIARRARSLLPVIAMNEVGLSDD 247 Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270 +F+S KPDIAM+RLMQGFGLK Sbjct: 248 QVVFISRKPDIAMQRLMQGFGLK 270 >gi|322373870|ref|ZP_08048405.1| glutamate racemase [Streptococcus sp. C150] gi|321277242|gb|EFX54312.1| glutamate racemase [Streptococcus sp. C150] Length = 271 Score = 311 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 111/269 (41%), Gaps = 18/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESVVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K + VIACNTA ++ +E++ + LG V P A +QSG Sbjct: 53 YTWQLVRFLLTK-NVKMIVIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSQSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I Q + + A VE +IK KK + Sbjct: 111 KIGVIGTPMTIASNIYEQKIKRLAPQMAVLSLPCPRFAPIVESN----EIKSSVAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ESMAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268 +R +D + + Q G Sbjct: 226 SREVEDKTEEYYTTASVRGFKEIADQWLG 254 >gi|69246346|ref|ZP_00603902.1| Glutamate racemase [Enterococcus faecium DO] gi|257878166|ref|ZP_05657819.1| glutamate racemase [Enterococcus faecium 1,230,933] gi|257881050|ref|ZP_05660703.1| glutamate racemase [Enterococcus faecium 1,231,502] gi|257889635|ref|ZP_05669288.1| glutamate racemase [Enterococcus faecium 1,231,410] gi|257892425|ref|ZP_05672078.1| glutamate racemase [Enterococcus faecium 1,231,408] gi|258616328|ref|ZP_05714098.1| glutamate racemase [Enterococcus faecium DO] gi|289565821|ref|ZP_06446263.1| glutamate racemase [Enterococcus faecium D344SRF] gi|293563127|ref|ZP_06677592.1| glutamate racemase [Enterococcus faecium E1162] gi|293569788|ref|ZP_06680875.1| glutamate racemase [Enterococcus faecium E1071] gi|294614005|ref|ZP_06693935.1| glutamate racemase [Enterococcus faecium E1636] gi|294617100|ref|ZP_06696766.1| glutamate racemase [Enterococcus faecium E1679] gi|294623311|ref|ZP_06702173.1| glutamate racemase [Enterococcus faecium U0317] gi|68195299|gb|EAN09750.1| Glutamate racemase [Enterococcus faecium DO] gi|257812394|gb|EEV41152.1| glutamate racemase [Enterococcus faecium 1,230,933] gi|257816708|gb|EEV44036.1| glutamate racemase [Enterococcus faecium 1,231,502] gi|257825995|gb|EEV52621.1| glutamate racemase [Enterococcus faecium 1,231,410] gi|257828804|gb|EEV55411.1| glutamate racemase [Enterococcus faecium 1,231,408] gi|289162364|gb|EFD10222.1| glutamate racemase [Enterococcus faecium D344SRF] gi|291587536|gb|EFF19413.1| glutamate racemase [Enterococcus faecium E1071] gi|291593112|gb|EFF24691.1| glutamate racemase [Enterococcus faecium E1636] gi|291596637|gb|EFF27864.1| glutamate racemase [Enterococcus faecium E1679] gi|291597279|gb|EFF28468.1| glutamate racemase [Enterococcus faecium U0317] gi|291604905|gb|EFF34374.1| glutamate racemase [Enterococcus faecium E1162] Length = 277 Score = 311 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P + ++V D PYG + + + ++ Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T Sbjct: 71 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + V + + ++ S VE + KK + K+ Sbjct: 129 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 184 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D ++L CTHYPL+ + + + V +D+ LL N + Sbjct: 185 IDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 244 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + +G + G+ Sbjct: 245 FYTTGSAKLFEEIAEDWLGI 264 >gi|313497102|gb|ADR58468.1| Glutamate racemase [Pseudomonas putida BIRD-1] Length = 265 Score = 311 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I + DSG+GGL VL +++ L+P +YV D PYG +++R + Sbjct: 5 SAPIGVMDSGVGGLSVLAEIQRLLPNETLLYVGDCGHIPYGEKSPDYIRERCRHIAGFFH 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL Sbjct: 65 EQGAKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +++ ++G Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIETG----DLASPALRQMLQGYVQPLLAAGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + + P V +D ++AR+ R LL + + Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPDDVAIIDTGAAVARQLRRLLGANDLLAEGPAGAARFWT 239 Query: 253 SGKPDIAMRRL 263 S P+ + L Sbjct: 240 SADPEALRKIL 250 >gi|218961215|ref|YP_001740990.1| Glutamate racemase [Candidatus Cloacamonas acidaminovorans] gi|167729872|emb|CAO80784.1| Glutamate racemase [Candidatus Cloacamonas acidaminovorans] Length = 267 Score = 311 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 14/262 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I IFDSG+GGL V Q +R P IY D PYG + + + + Sbjct: 1 MKRAIGIFDSGVGGLTVYQAIRNTFPNEDIIYFGDTARVPYGPKSPNTIIDYSLQNARFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + + ++ACNT+ + L++ + +G + P +Q+ T+ I ++ T Sbjct: 61 L-QQGIKILIVACNTSSAVAIPALQN-LSDIPVIGVIEPGAEQSVKVTKCKRIGVIGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R + I + + + + + VEE + E E E + + Sbjct: 119 TIRSGAYPSAIRKLLPEAFVVSSACPLFVPLVEEGWQEHPVAE----VIAEEYLKEMKEQ 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTHYPL+ ++ +Q+ V +D++ ++A C L N Q Sbjct: 175 NIDTLVLGCTHYPLLSNIIQQVMGEEVTLVDSAMAVAEYLSCYLSAENDGQKGRDS---F 231 Query: 251 FLSGK----PDIAMRRLMQGFG 268 ++S +IA R L G Sbjct: 232 YVSDNENKFAEIAERILQHNIG 253 >gi|206889915|ref|YP_002249185.1| glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741853|gb|ACI20910.1| glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 270 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 7/251 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + IFDSG+GGL VL+++ L+P IY+ D PYG + K + S + Sbjct: 3 EKPVGIFDSGVGGLTVLKEIAKLLPNEELIYLGDTARVPYGIRSAETVIKYSIECASFLF 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K + V+ACNT+ ++ + L+ P P ++ A T++G I I+ T AT+ Sbjct: 63 KKG-IKILVVACNTSSSVSLEVLKEKLPIAVIGVIEPGVRAALKATKNGKIGIIGTEATI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I S + + + + VEE I E + E E + Sbjct: 122 QSGAYPKKIKSIEPEIEVISKACPLFVPLVEEGILEGSIAELIV----ERYLKELKNSGI 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251 D ++L CTHYPL+ ++ + +D+++ I+R + +L + + Sbjct: 178 DTLILGCTHYPLLKKTIQKYM-EGIQLVDSAEEISREVKEMLSYQGLINEKTNSGGKTFY 236 Query: 252 LSGKPDIAMRR 262 ++ PD + Sbjct: 237 VTDSPDRFKKI 247 >gi|77460966|ref|YP_350473.1| glutamate racemase [Pseudomonas fluorescens Pf0-1] gi|77384969|gb|ABA76482.1| putative glutamate racemase [Pseudomonas fluorescens Pf0-1] Length = 263 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 5/245 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL +++ L+P +Y+ D PYG +++R + Sbjct: 3 EAPIAVFDSGVGGLSVLAEIQQLLPNESLLYLGDCGHIPYGEKTPEFIRQRCSVMAGFFR 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L VIACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL Sbjct: 63 EQGAKAL-VIACNTATVAGVADLRRDFPEWPIVGMEPAVKPAAAATRSGVVGVLATTGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +++ ++ Sbjct: 122 QSAKFAALLDRFATDVRVITQPCPGLVELIESG----DLHSPQLRALLKHYVDPLLANGC 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTHYP + + + + P + +D ++AR+ + LL + + Sbjct: 178 DTIILGCTHYPFLKPMLKSMIPESISLIDTGAAVARQLQRLLAERDLLAEGPNRPVRFWT 237 Query: 253 SGKPD 257 S P+ Sbjct: 238 SADPE 242 >gi|257884711|ref|ZP_05664364.1| glutamate racemase [Enterococcus faecium 1,231,501] gi|257820549|gb|EEV47697.1| glutamate racemase [Enterococcus faecium 1,231,501] Length = 277 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P + ++V D PYG + + + ++ Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 D+ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T Sbjct: 71 DQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + V + + ++ S VE + KK + K+ Sbjct: 129 VKSRAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 184 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D ++L CTHYPL+ + + + V +D+ LL N + Sbjct: 185 IDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 244 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + +G + G+ Sbjct: 245 FYTTGSAKLFEEIAEDWLGI 264 >gi|26987472|ref|NP_742897.1| glutamate racemase [Pseudomonas putida KT2440] gi|38258012|sp|Q88PW2|MURI_PSEPK RecName: Full=Glutamate racemase gi|24982136|gb|AAN66361.1|AE016264_5 glutamate racemase [Pseudomonas putida KT2440] Length = 265 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I + DSG+GGL VL +++ L+P +YV D PYG +++R + Sbjct: 5 SAPIGVMDSGVGGLSVLAEIQRLLPNETLLYVGDCGHIPYGEKSPDYIRERCRRIAGFFH 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL Sbjct: 65 EQGAKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +++ ++G Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIEAG----DLVSPAVRQLLQGYVQPLLAAGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + + P V +D ++AR+ + LL + + Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPDDVAIIDTGAAVARQLQRLLGANDLLAEGPAGAARFWT 239 Query: 253 SGKPDIAMRRL 263 S P+ + L Sbjct: 240 SADPEALRKIL 250 >gi|315648539|ref|ZP_07901638.1| glutamate racemase [Paenibacillus vortex V453] gi|315276233|gb|EFU39579.1| glutamate racemase [Paenibacillus vortex V453] Length = 268 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +I I DSG+GGL V +++ +P IY D PYG ++ + + Sbjct: 1 MQQAIAILDSGVGGLTVAKEVMRQLPREKIIYFGDTARAPYGPRTPEEVRLFTEQIVDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + +Y P + VIACNTA D + S S+ +G + P + A + T++G + ++ T Sbjct: 61 I-QYDPKMIVIACNTATAAALDYISSKV-SVPVIGVIHPGARAAISATKTGNVGVIGTTG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + + L VE K +++ + G + Sbjct: 119 TIGSGAYTAALKQLSPYVEVQSQACPKLVPLVEHGLFRSKESLQVVQESLRGI----KDT 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHA 249 D ++L CTHYP + + + + V + ++D AR +L + + H Sbjct: 175 SIDCLILGCTHYPFLRNTIQTVMGPAVKLISSADETAREVSTILYDKGQLASSEESPVHQ 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G P I + G Sbjct: 235 FFCTGDPVIFQSIATEWLG 253 >gi|151567725|pdb|2JFU|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate Racemase In Complex With Phosphate gi|151567726|pdb|2JFV|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate Racemase In Complex With Citrate gi|151567727|pdb|2JFW|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate Racemase In Complex With Tartrate Length = 291 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P + ++V D PYG + + + ++ Sbjct: 25 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 84 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T Sbjct: 85 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 142 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + V + + ++ S VE + KK + K+ Sbjct: 143 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 198 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D ++L CTHYPL+ + + + V +D+ LL N + Sbjct: 199 IDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 258 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + +G + G+ Sbjct: 259 FYTTGSAKLFEEIAEDWLGI 278 >gi|313890894|ref|ZP_07824518.1| glutamate racemase [Streptococcus pseudoporcinus SPIN 20026] gi|313120792|gb|EFR43907.1| glutamate racemase [Streptococcus pseudoporcinus SPIN 20026] Length = 264 Score = 311 bits (798), Expect = 8e-83, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P + +YV D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPYENIVYVGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + ++ K + V ACNTA + +E++ + LG + P A T G Sbjct: 53 YTWELVNFLVTK-NVKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE +I+ KK + Sbjct: 111 HVGVIGTPMTVTSDIYRQKIQLLAPAVEVISLACPKFVPIVESN----EIQSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINS 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 +R + H + + P+I Sbjct: 226 SRYQEKVRHYFYTTASPEIFQEIASVWL 253 >gi|114707294|ref|ZP_01440191.1| glutamate racemase [Fulvimarina pelagi HTCC2506] gi|114537175|gb|EAU40302.1| glutamate racemase [Fulvimarina pelagi HTCC2506] Length = 262 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 131/259 (50%), Positives = 182/259 (70%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ILI DSG+GGL VL++ R LMP+ F+YVADD GFPYGNWE+ AL+ RL+ LF D++ Sbjct: 3 DAPILILDSGVGGLTVLREARVLMPDRRFVYVADDAGFPYGNWEEDALRDRLVALFGDLI 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++P+ VIACNTA TL + LR ++P M F+G VPAIK AA T+SGL+S+L+TP T+ Sbjct: 63 VAHEPLACVIACNTASTLALNALRQSYPRMKFVGTVPAIKPAAERTRSGLVSVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 RR YT +LI + S+ + LV S+ LAS E Y G + E + EI CFIE+ G+RT Sbjct: 123 RRQYTQDLIDQWASRVSVKLVGSVALASLAERYMRGGFVDEQAVLAEIAPCFIEENGRRT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D++VLACTHYP +V+ R+++PWPVDWLD +++IAR+A ++ T D A+F Sbjct: 183 DIVVLACTHYPFLVNRMRKMAPWPVDWLDPAEAIARQADRVVGDAGTRSMHGDFDPAVFT 242 Query: 253 SGKPDIAMRRLMQGFGLKS 271 SG PD A +R+++GFGL++ Sbjct: 243 SGAPDYATQRIVRGFGLRT 261 >gi|257869444|ref|ZP_05649097.1| glutamate racemase [Enterococcus gallinarum EG2] gi|257803608|gb|EEV32430.1| glutamate racemase [Enterococcus gallinarum EG2] Length = 270 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 105/262 (40%), Gaps = 10/262 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P H IY+ D PYG + + + +L Sbjct: 4 KQPIGFIDSGVGGLTVVKEAIKQLPNEHIIYLGDTARCPYGPRPAEQVIEYTWQMTEFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + VIACNTA + +E++ S+ +G + P + A T++ I ++ T T Sbjct: 64 -QQNIKMLVIACNTATAVALEEIKEKL-SIPVIGVILPGSRAAVKATKNQQIGVIGTAGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I + + ++ A VE + KK + + K+ Sbjct: 122 IKSNAYEEAIKLKSPRSVVVSLACPKFAPIVESNQAQSSVA----KKIVAETLRPLKNKK 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDH 248 D ++L CTHYPL+ + + + +D+ LL NT Q ++ Sbjct: 178 LDTLILGCTHYPLLRSLIQNEMGSQIQLIDSGAETVGEVSMLLDYFAIANTSQMTQEPEY 237 Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270 + +G + + + Sbjct: 238 FFYTTGSTKLFDEIANEWLNVP 259 >gi|2462086|emb|CAA70886.1| putative glutamate racemase protein [Bacillus cereus ATCC 10987] Length = 269 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +LD + VIA NTA ++ +E++ P + +G + P + A T + + I+ T Sbjct: 62 LLD-LNIKMLVIAMNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + S ++ + ++ VE ++ + +++ ++ + Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248 D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +GK + + FG Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255 >gi|303238403|ref|ZP_07324938.1| glutamate racemase [Acetivibrio cellulolyticus CD2] gi|302594107|gb|EFL63820.1| glutamate racemase [Acetivibrio cellulolyticus CD2] Length = 268 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 14/259 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSGIGGL VL+++ L+P+ +Y D PYG + K Sbjct: 1 MDNRP--------IGVFDSGIGGLTVLKEINRLLPQESVVYFGDSGRAPYGTKSKETVIK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 L + VIACNTA D ++ +F P AA T++ Sbjct: 53 YTFQDI-RFLQNQDIKMIVIACNTASACSLDRVKHSFDFPIVEVVQPGSAAAAKETRNNR 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + ++ TPAT+ I S I + VEE +I K E Sbjct: 112 VGVIGTPATISSGVYEKAITRINSSIEIFSKPCPMFVPLVEEGWWENEIA----FKIAEE 167 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + + D +VL CTHYPL+ + +++ V ++++ +A+ + + N + Sbjct: 168 YLLPLKELDIDTLVLGCTHYPLLQNTIQKVMGDDVKLVNSALEVAKVVKEGIEENNNGRD 227 Query: 243 -RVFDDHALFLSGKPDIAM 260 +V + S + Sbjct: 228 EKVSPVCRFYTSDSVEKFE 246 >gi|260559213|ref|ZP_05831399.1| glutamate racemase [Enterococcus faecium C68] gi|261207746|ref|ZP_05922431.1| glutamate racemase [Enterococcus faecium TC 6] gi|314939892|ref|ZP_07847098.1| glutamate racemase [Enterococcus faecium TX0133a04] gi|314943739|ref|ZP_07850478.1| glutamate racemase [Enterococcus faecium TX0133C] gi|314949695|ref|ZP_07853013.1| glutamate racemase [Enterococcus faecium TX0082] gi|314953241|ref|ZP_07856180.1| glutamate racemase [Enterococcus faecium TX0133A] gi|314993679|ref|ZP_07859027.1| glutamate racemase [Enterococcus faecium TX0133B] gi|314997404|ref|ZP_07862355.1| glutamate racemase [Enterococcus faecium TX0133a01] gi|260074970|gb|EEW63286.1| glutamate racemase [Enterococcus faecium C68] gi|260078129|gb|EEW65835.1| glutamate racemase [Enterococcus faecium TC 6] gi|313588539|gb|EFR67384.1| glutamate racemase [Enterococcus faecium TX0133a01] gi|313591853|gb|EFR70698.1| glutamate racemase [Enterococcus faecium TX0133B] gi|313594707|gb|EFR73552.1| glutamate racemase [Enterococcus faecium TX0133A] gi|313597602|gb|EFR76447.1| glutamate racemase [Enterococcus faecium TX0133C] gi|313640855|gb|EFS05435.1| glutamate racemase [Enterococcus faecium TX0133a04] gi|313643953|gb|EFS08533.1| glutamate racemase [Enterococcus faecium TX0082] Length = 273 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P + ++V D PYG + + + ++ Sbjct: 7 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T Sbjct: 67 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + V + + ++ S VE + KK + K+ Sbjct: 125 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D ++L CTHYPL+ + + + V +D+ LL N + Sbjct: 181 IDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 240 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + +G + G+ Sbjct: 241 FYTTGSAKLFEEIAEDWLGI 260 >gi|217964697|ref|YP_002350375.1| glutamate racemase [Listeria monocytogenes HCC23] gi|254766118|sp|B8DHZ5|MURI_LISMH RecName: Full=Glutamate racemase gi|217333967|gb|ACK39761.1| glutamate racemase [Listeria monocytogenes HCC23] gi|307570742|emb|CAR83921.1| racE [Listeria monocytogenes L99] Length = 266 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ + VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + ++ S VE + K KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 + D ++L CTHYPL+ + V +++ + A LL N + + +H Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDSTDEEIEHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 235 FFTTGSTQIFKDIAKDWL 252 >gi|257887546|ref|ZP_05667199.1| glutamate racemase [Enterococcus faecium 1,141,733] gi|257896041|ref|ZP_05675694.1| glutamate racemase [Enterococcus faecium Com12] gi|293378787|ref|ZP_06624944.1| glutamate racemase [Enterococcus faecium PC4.1] gi|257823600|gb|EEV50532.1| glutamate racemase [Enterococcus faecium 1,141,733] gi|257832606|gb|EEV59027.1| glutamate racemase [Enterococcus faecium Com12] gi|292642580|gb|EFF60733.1| glutamate racemase [Enterococcus faecium PC4.1] Length = 281 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P + ++V D PYG + + + ++ Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T Sbjct: 71 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + V + + ++ S VE + KK + K+ Sbjct: 129 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 184 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D ++L CTHYPL+ + + + V +D+ LL N + Sbjct: 185 IDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 244 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + +G + G+ Sbjct: 245 FYTTGSAKLFQEIAEDWLGI 264 >gi|228476470|ref|ZP_04061160.1| glutamate racemase [Streptococcus salivarius SK126] gi|228251891|gb|EEK10937.1| glutamate racemase [Streptococcus salivarius SK126] Length = 271 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 18/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAEQIRQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K + VIACNTA ++ +E++ + LG V P A +QSG Sbjct: 53 YTWQLVKFLLTK-DVKMIVIACNTATAVVWEEIKGAL-DIPVLGVVLPGSSAAIKSSQSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I Q ++ +S A VE +I KK + Sbjct: 111 HIGVIGTPMTIASNIYEQKIKHLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ESMAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268 +R +D + + Q G Sbjct: 226 SREVEDKTEEYYTTASVLGFKEIAEQWLG 254 >gi|239629726|ref|ZP_04672757.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239528412|gb|EEQ67413.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 578 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 106/261 (40%), Gaps = 8/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L Sbjct: 97 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 156 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T Sbjct: 157 KKH-IKMLVIACNTATAAALPLIKANL-DIPVIGVIKPGSRAALKATQTGHIGIIATEGT 214 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + + I +++ S VE I K+ + + Sbjct: 215 VKSGAYVKALRAKAPKIRITSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHED 270 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250 D ++L CTHYP++ + + + V +D+ LL + + + H Sbjct: 271 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 330 Query: 251 FLSGKPDIAMRRLMQGFGLKS 271 + +G P + L + Sbjct: 331 YTTGAPSMFDELGEAWLELTA 351 >gi|238892365|ref|YP_002917099.1| glutamate racemase [Klebsiella pneumoniae NTUH-K2044] gi|238544681|dbj|BAH61032.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 283 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 83/273 (30%), Positives = 145/273 (53%), Gaps = 10/273 (3%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + ++L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQQRYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ + Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 +E D +VL CTH+PL+ +++ P +D+ +IARR LL Sbjct: 188 RPWLRMQEP--PDTVVLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALF--LSGKPDIAMRRLMQGFGLKS 271 ++ A L+ + + + +++ +G + Sbjct: 246 AKSSDENKAFCMALTAETEQLL-PVLRRYGFST 277 >gi|206577595|ref|YP_002241172.1| glutamate racemase [Klebsiella pneumoniae 342] gi|288937809|ref|YP_003441868.1| glutamate racemase [Klebsiella variicola At-22] gi|290513035|ref|ZP_06552398.1| glutamate racemase [Klebsiella sp. 1_1_55] gi|226707588|sp|B5XZ09|MURI_KLEP3 RecName: Full=Glutamate racemase gi|206566653|gb|ACI08429.1| glutamate racemase [Klebsiella pneumoniae 342] gi|288892518|gb|ADC60836.1| glutamate racemase [Klebsiella variicola At-22] gi|289774417|gb|EFD82422.1| glutamate racemase [Klebsiella sp. 1_1_55] Length = 283 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 83/273 (30%), Positives = 144/273 (52%), Gaps = 10/273 (3%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + ++L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQQRYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ + Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 +E D +VL CTH+PL+ +++ P +D+ +IARR LL Sbjct: 188 RPWLRMQEP--PDTVVLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALF--LSGKPDIAMRRLMQGFGLKS 271 ++ A L+ + + + ++ +G + Sbjct: 246 AKSSDENKAFCMALTAETEQLL-PVLHRYGFPT 277 >gi|251787784|ref|YP_003002505.1| glutamate racemase [Dickeya zeae Ech1591] gi|247536405|gb|ACT05026.1| glutamate racemase [Dickeya zeae Ech1591] Length = 290 Score = 309 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 143/261 (54%), Gaps = 4/261 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ + + Sbjct: 22 ARPTVLVFDSGVGGLSVYDEVRKLLPDLHYIYAFDNEAFPYGEKPEQFIIERVLSIVDAV 81 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ L +IACNTA T+ LR F +G VPA+K AA T++G++ +L+T AT Sbjct: 82 EKQHPLSLVIIACNTASTISLPALRERF-DFPVVGVVPAVKPAAKLTRNGVVGLLATRAT 140 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R+YT LI + C I L+ S L E G + E+ ++K + K + Sbjct: 141 VQRSYTHELISRFAHDCQILLLGSAELVEFAEAKLQGESVSEEVLRKILRPWL--KLAEP 198 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PL+ +++ P +D+ +IARR L+ ++ + + A Sbjct: 199 PDTVVLGCTHFPLLAEELQRVLPDGTRLVDSGSAIARRTAWLIEHLDNPKCSTEKNLAYC 258 Query: 252 LSGKPDI-AMRRLMQGFGLKS 271 LS P + A+ +++ +G S Sbjct: 259 LSITPKVAALWPVLRRYGFNS 279 >gi|260587549|ref|ZP_05853462.1| glutamate racemase [Blautia hansenii DSM 20583] gi|331084204|ref|ZP_08333310.1| glutamate racemase [Lachnospiraceae bacterium 6_1_63FAA] gi|260541814|gb|EEX22383.1| glutamate racemase [Blautia hansenii DSM 20583] gi|330402059|gb|EGG81632.1| glutamate racemase [Lachnospiraceae bacterium 6_1_63FAA] Length = 273 Score = 309 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 102/258 (39%), Gaps = 10/258 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + K I +FDSG+GGL V +++ +P +Y D PYG+ + + + Sbjct: 1 MKYKKTAPIGVFDSGVGGLTVAREIMRNLPHEKIVYFGDTARVPYGSKSKETILRYSRQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 L + V+ACNTA L + + + +G V P K AA T++ I ++ Sbjct: 61 V-RFLQTQEVKAIVVACNTASALALETISEEI-DIPIIGVVKPGAKVAAQTTRNKKIGLI 118 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT++ I + + + + VEE + + K+ + Sbjct: 119 GTRATVKSDLYRKTIQAENPEIEVIGQPCPLFVPLVEEGWLKDSVTIEVAKRYLAPLL-- 176 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TR 243 K D ++L CTHYPL+ + L V ++ + A+ + LL T Sbjct: 177 --EKDIDTLILGCTHYPLLRSTLKTLVGDGVTLVNPAYETAKELQRLLKEQGMENEIHTD 234 Query: 244 VFDDHALFLSGKPDIAMR 261 + F+S + + Sbjct: 235 EEFPYRFFVSDEEECFQE 252 >gi|227551339|ref|ZP_03981388.1| glutamate racemase [Enterococcus faecium TX1330] gi|227179550|gb|EEI60522.1| glutamate racemase [Enterococcus faecium TX1330] Length = 277 Score = 309 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P + ++V D PYG + + + ++ Sbjct: 7 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T Sbjct: 67 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + V + + ++ S VE + KK + K+ Sbjct: 125 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D ++L CTHYPL+ + + + V +D+ LL N + Sbjct: 181 IDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 240 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + +G + G+ Sbjct: 241 FYTTGSAKLFQEIAEDWLGI 260 >gi|319946457|ref|ZP_08020694.1| glutamate racemase [Streptococcus australis ATCC 700641] gi|319747425|gb|EFV99681.1| glutamate racemase [Streptococcus australis ATCC 700641] Length = 264 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 18/254 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG ++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVVYIGDSARAPYGPRPADQIRD 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + +L K + V+ACNTA ++ +E++ + LG + P A T+S Sbjct: 53 YTWEMVRFLLTK-NVKMIVLACNTATAVVWEEVKEAL-DIPVLGVILPGASAAIKATKSK 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I S + + ++ VE + + + + ++ Sbjct: 111 RIGVIGTPMTVASDIYRKKIQSLSPEMAVESLACPKFVPLVESNELQSSVTKKVVYETLK 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 171 PL-----AGKVDTLVLGCTHYPLLRPIIQNVMGPEVQLIDSGAECVRDISVLLNYFEINR 225 Query: 242 TRVFDD--HALFLS 253 +R +D H + + Sbjct: 226 SRQLEDCHHQFYTT 239 >gi|313624059|gb|EFR94143.1| glutamate racemase [Listeria innocua FSL J1-023] Length = 266 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAQFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ + VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + ++ S VE + K KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 + D ++L CTHYPL+ + V +++ + A LL N + +H Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 235 FFTTGSTQIFKDIAKDWL 252 >gi|16800269|ref|NP_470537.1| glutamate racemase [Listeria innocua Clip11262] gi|20177980|sp|Q92CH2|MURI_LISIN RecName: Full=Glutamate racemase gi|16413659|emb|CAC96431.1| racE [Listeria innocua Clip11262] gi|313619282|gb|EFR91023.1| glutamate racemase [Listeria innocua FSL S4-378] Length = 266 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAQFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ + VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + ++ S VE + K KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 + D ++L CTHYPL+ + V +++ + A LL N + +H Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDDEIEHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 235 FFTTGSTQIFKDIAKDWL 252 >gi|308068443|ref|YP_003870048.1| glutamate racemase [Paenibacillus polymyxa E681] gi|305857722|gb|ADM69510.1| Glutamate racemase [Paenibacillus polymyxa E681] Length = 271 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I I DSG+GGL V++++ +P IY D PYG +KK + ++ Sbjct: 4 QQAIAILDSGVGGLTVVKEVMRQLPREKIIYFGDTARTPYGPRPSEEVKKFTEQMVDFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ P + +IACNTA D + S+ +G + P + A + T +G + ++ T T Sbjct: 64 -QFDPKVIIIACNTATAAALDYISQKV-SIPVIGVIHPGARAAISATATGHVGVIGTVGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + + + + L VE+ K + +E + Sbjct: 122 IRSGAYTAALKQLSPYVDVVSHACPALVPLVEQGLFRSKTTS----QVVEETLRPIQTYP 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHAL 250 D ++L CTHYP + +++ V + ++D AR +L + H L Sbjct: 178 IDCLILGCTHYPFLKETIQEVMGPAVKLISSADETARETSTILYNKGKLEAGDETPVHQL 237 Query: 251 FLSGKPDIAMRRLMQGFG 268 F SG P++ R Q G Sbjct: 238 FCSGDPELFQRIAAQWLG 255 >gi|315282014|ref|ZP_07870520.1| glutamate racemase [Listeria marthii FSL S4-120] gi|313614341|gb|EFR87979.1| glutamate racemase [Listeria marthii FSL S4-120] Length = 266 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 103/258 (39%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVARFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ + VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + ++ S VE + K KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 D ++L CTHYPL+ + V +++ + A LL N + +H Sbjct: 175 NIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 235 FFTTGSTQIFKDIAKDWL 252 >gi|116872608|ref|YP_849389.1| glutamate racemase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466205|sp|A0AHX8|MURI_LISW6 RecName: Full=Glutamate racemase gi|116741486|emb|CAK20610.1| glutamate racemase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 266 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ + VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATKNNKIGVLGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + ++ S VE + K KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 + D ++L CTHYPL+ + V +++ + A LL N + +H Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDGVSVINSGEETASEVSALLDYHNLLDATDEEIEHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 235 FFTTGSTQIFKDIAKDWL 252 >gi|312862544|ref|ZP_07722786.1| glutamate racemase [Streptococcus vestibularis F0396] gi|322517484|ref|ZP_08070357.1| glutamate racemase [Streptococcus vestibularis ATCC 49124] gi|311101949|gb|EFQ60150.1| glutamate racemase [Streptococcus vestibularis F0396] gi|322123966|gb|EFX95525.1| glutamate racemase [Streptococcus vestibularis ATCC 49124] Length = 271 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 111/269 (41%), Gaps = 18/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K + VIACNTA ++ +E++ + LG V P A +QSG Sbjct: 53 YTWQLVKFLLTK-DVKMIVIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSQSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I Q ++ +S A VE +I KK + Sbjct: 111 QIGVIGTPMTIASNIYEQKIKRLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 K D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ESMAPLVDK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268 +R +D + + Q G Sbjct: 226 SREVEDKTEEYYTTASVLGFKEIAEQWLG 254 >gi|16803277|ref|NP_464762.1| glutamate racemase [Listeria monocytogenes EGD-e] gi|46907456|ref|YP_013845.1| glutamate racemase [Listeria monocytogenes serotype 4b str. F2365] gi|47097378|ref|ZP_00234930.1| glutamate racemase [Listeria monocytogenes str. 1/2a F6854] gi|224499092|ref|ZP_03667441.1| glutamate racemase [Listeria monocytogenes Finland 1988] gi|224503808|ref|ZP_03672115.1| glutamate racemase [Listeria monocytogenes FSL R2-561] gi|226223837|ref|YP_002757944.1| glutamate racemase [Listeria monocytogenes Clip81459] gi|254823509|ref|ZP_05228510.1| racE [Listeria monocytogenes FSL J1-194] gi|254828597|ref|ZP_05233284.1| glutamate racemase [Listeria monocytogenes FSL N3-165] gi|254830009|ref|ZP_05234664.1| glutamate racemase [Listeria monocytogenes 10403S] gi|254852894|ref|ZP_05242242.1| racE [Listeria monocytogenes FSL R2-503] gi|254898602|ref|ZP_05258526.1| glutamate racemase [Listeria monocytogenes J0161] gi|254932885|ref|ZP_05266244.1| racE [Listeria monocytogenes HPB2262] gi|254936234|ref|ZP_05267931.1| racE [Listeria monocytogenes F6900] gi|254993152|ref|ZP_05275342.1| glutamate racemase [Listeria monocytogenes FSL J2-064] gi|255025221|ref|ZP_05297207.1| glutamate racemase [Listeria monocytogenes FSL J2-003] gi|255522515|ref|ZP_05389752.1| glutamate racemase [Listeria monocytogenes FSL J1-175] gi|284801557|ref|YP_003413422.1| hypothetical protein LM5578_1310 [Listeria monocytogenes 08-5578] gi|284994699|ref|YP_003416467.1| hypothetical protein LM5923_1263 [Listeria monocytogenes 08-5923] gi|290893281|ref|ZP_06556267.1| racE protein [Listeria monocytogenes FSL J2-071] gi|300764386|ref|ZP_07074380.1| glutamate racemase [Listeria monocytogenes FSL N1-017] gi|20177977|sp|Q8Y7N7|MURI_LISMO RecName: Full=Glutamate racemase gi|67460886|sp|Q720J2|MURI_LISMF RecName: Full=Glutamate racemase gi|259509916|sp|C1L2E2|MURI_LISMC RecName: Full=Glutamate racemase gi|16410653|emb|CAC99315.1| racE [Listeria monocytogenes EGD-e] gi|46880724|gb|AAT04022.1| glutamate racemase [Listeria monocytogenes serotype 4b str. F2365] gi|47014250|gb|EAL05231.1| glutamate racemase [Listeria monocytogenes str. 1/2a F6854] gi|225876299|emb|CAS05008.1| Putative glutamate racemase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600995|gb|EEW14320.1| glutamate racemase [Listeria monocytogenes FSL N3-165] gi|258606229|gb|EEW18837.1| racE [Listeria monocytogenes FSL R2-503] gi|258608824|gb|EEW21432.1| racE [Listeria monocytogenes F6900] gi|284057119|gb|ADB68060.1| hypothetical protein LM5578_1310 [Listeria monocytogenes 08-5578] gi|284060166|gb|ADB71105.1| hypothetical protein LM5923_1263 [Listeria monocytogenes 08-5923] gi|290557089|gb|EFD90617.1| racE protein [Listeria monocytogenes FSL J2-071] gi|293584439|gb|EFF96471.1| racE [Listeria monocytogenes HPB2262] gi|293592729|gb|EFG00490.1| racE [Listeria monocytogenes FSL J1-194] gi|300515038|gb|EFK42091.1| glutamate racemase [Listeria monocytogenes FSL N1-017] gi|313609160|gb|EFR84843.1| glutamate racemase [Listeria monocytogenes FSL F2-208] gi|328466631|gb|EGF37766.1| glutamate racemase [Listeria monocytogenes 1816] gi|328475255|gb|EGF46036.1| glutamate racemase [Listeria monocytogenes 220] gi|332311623|gb|EGJ24718.1| Glutamate racemase [Listeria monocytogenes str. Scott A] Length = 266 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ + VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + ++ S VE + K KK + + + Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 + D ++L CTHYPL+ + V +++ + A LL N + +H Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 235 FFTTGSTQIFKDIAKDWL 252 >gi|310641323|ref|YP_003946081.1| glutamate racemase [Paenibacillus polymyxa SC2] gi|309246273|gb|ADO55840.1| Glutamate racemase [Paenibacillus polymyxa SC2] Length = 269 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +I I DSG+GGL V++++ +P IY D PYG +KK + + Sbjct: 1 MQQAIAILDSGVGGLTVVKEVMRQLPREKIIYFGDTARTPYGPRPSEEVKKFTEQMVDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + ++ P + +IACNTA + + S+ +G + P + A + T +G + ++ T Sbjct: 61 I-QFNPKVIIIACNTATAAALEYISQKV-SIPVIGVIHPGARAAISATATGYVGVIGTVG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R + + + + L VE+ K + +E + Sbjct: 119 TIRSGAYTTALKQLSPYVDVVSHACPALVPLVEQGLFRSKTTS----QVVEESLRPIQTY 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHA 249 D ++L CTHYP + +++ V + ++D AR +L + H Sbjct: 175 PIDCLILGCTHYPFLRETIQEVMGPAVKLISSADETARETSTILYNKGKLEAGDETPVHQ 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 LF SG P++ R Q G Sbjct: 235 LFCSGDPELFQRIAAQWLG 253 >gi|257898669|ref|ZP_05678322.1| glutamate racemase [Enterococcus faecium Com15] gi|257836581|gb|EEV61655.1| glutamate racemase [Enterococcus faecium Com15] Length = 273 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P + ++V D PYG + + + ++ Sbjct: 7 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T Sbjct: 67 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + V + + ++ S VE + KK + K+ Sbjct: 125 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D ++L CTHYPL+ + + + V +D+ LL N + Sbjct: 181 IDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 240 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + +G + G+ Sbjct: 241 FYTTGSAKLFQEIAEDWLGI 260 >gi|293554039|ref|ZP_06674639.1| glutamate racemase [Enterococcus faecium E1039] gi|291601821|gb|EFF32073.1| glutamate racemase [Enterococcus faecium E1039] Length = 277 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P + ++V D PYG + + + ++ Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 D+ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T Sbjct: 71 DQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + V + + ++ S VE + KK + K+ Sbjct: 129 VKSRAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 184 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D ++L CTHYPL+ + + + V +D+ LL N + Sbjct: 185 IDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 244 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + +G + G+ Sbjct: 245 FYTTGSAKLFEEIAEDWLGI 264 >gi|222152578|ref|YP_002561753.1| glutamate racemase [Streptococcus uberis 0140J] gi|254766128|sp|B9DTR9|MURI_STRU0 RecName: Full=Glutamate racemase gi|222113389|emb|CAR41037.1| glutamate racemase [Streptococcus uberis 0140J] Length = 264 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +YV D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHESIVYVGDSARAPYGPRPADQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + V ACNTA + +E+++ S+ LG + P A T SG Sbjct: 53 FTWELVNFLLTK-NVKMIVFACNTATAVAWEEVKNAL-SIPVLGVILPGSSAAIKSTTSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T++ I Q + ++ VE + + + + +E Sbjct: 111 KVGVIGTPMTIQSDIYRQKIQLLAPQIEVLSLACPKFVPIVESNETKSSVAKKIVYETLE 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLRPIIQNVMGSEVTLIDSGAECIRDISVLLNYFQINA 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 +R D+ F + D Sbjct: 226 SREEKKADNLFFTTAGTDTFKEIANAWL 253 >gi|315640905|ref|ZP_07896001.1| glutamate racemase [Enterococcus italicus DSM 15952] gi|315483323|gb|EFU73823.1| glutamate racemase [Enterococcus italicus DSM 15952] Length = 272 Score = 308 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 103/260 (39%), Gaps = 9/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 I DSG+GGL V+++ +P + IY+ D PYG + + Sbjct: 2 DKNQPIGFIDSGVGGLTVVKEALKQLPNENIIYLGDTARCPYGPRPAEQVIAFTWEMTRF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +L+K + VIACNTA + +E++ T S+ +G + P + A T + I ++ T Sbjct: 62 LLNK-NIKMLVIACNTATAVALEEIKKTL-SIPVIGVILPGSRAAIKATHTNQIGVIGTE 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ ++ + I ++ VE + + KK + E Sbjct: 120 GTIKSASYERVLQEKSPKAKILSLACPKFVPIVESN----QFQTSVAKKIVAESLRYFEK 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248 + D ++L CTHYP++ + + + V +D+ LL T + + Sbjct: 176 QPVDTLILGCTHYPILRPLIQNVMGSKVKLIDSGAETVGEVSTLLDYFQMANTTLTTERS 235 Query: 249 -ALFLSGKPDIAMRRLMQGF 267 + +G + + + Sbjct: 236 MTFYTTGSTKMFDQIAKEWL 255 >gi|299822584|ref|ZP_07054470.1| glutamate racemase [Listeria grayi DSM 20601] gi|299816113|gb|EFI83351.1| glutamate racemase [Listeria grayi DSM 20601] Length = 270 Score = 308 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 104/259 (40%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + Sbjct: 1 MKQAIGFIDSGVGGLTVVKEVLKQLPHEQIYYLGDTARCPYGPRKPEEVLKFTREMSHFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ + VIACNTA ++R+ + +G + P + A +++ I++L T Sbjct: 61 IDRG-IKMLVIACNTATAAALVQIRAEL-DIPVIGVIQPGSRAALKESRNNKIAVLGTIG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + Q + ++ S VE + K KK + + + Sbjct: 119 TVKSEAYPKALKRLNHQVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKNT 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 D ++L CTHYPL+ + V +++ + A LL + H Sbjct: 175 TIDTVILGCTHYPLLKPIIENFLGADVAVINSGEETASEVSALLDYHGLLDSGGDTIKHR 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F +G I G Sbjct: 235 FFTTGSTSIFKNLAEDWLG 253 >gi|302390710|ref|YP_003826531.1| glutamate racemase [Thermosediminibacter oceani DSM 16646] gi|302201338|gb|ADL08908.1| glutamate racemase [Thermosediminibacter oceani DSM 16646] Length = 273 Score = 308 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 65/250 (26%), Positives = 101/250 (40%), Gaps = 6/250 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSGIGGL V +++ +P + +Y D PYG+ + R F + L Sbjct: 5 ERPIGIFDSGIGGLTVAREIMNHLPGENLVYFGDTARVPYGSKSKETIT-RFAFEGVNFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K + VIACNT DEL+ P P + A T +G++ ++ T T+ Sbjct: 64 MKQAVKMIVIACNTVSATCLDELQQAVPVPVVGVIEPGARAAVNATVNGVVGVIGTERTI 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 IH S I + + VEE + + + + Sbjct: 124 NSGAYIKAIHRLNSSIKIFSRACPMFVPLVEEGW----LDNEAAVFAARTYLGPLKKEGI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALF 251 D +VLACTHYPL+ R++ V +D++ AR LL + +T + F Sbjct: 180 DTLVLACTHYPLLKPTLRKVMGDQVFLVDSAMETAREVARLLREKSLARTGGGPATYRYF 239 Query: 252 LSGKPDIAMR 261 +S P Sbjct: 240 VSDNPAKFKE 249 >gi|199598101|ref|ZP_03211524.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family protein [Lactobacillus rhamnosus HN001] gi|258507777|ref|YP_003170528.1| glutamate racemase [Lactobacillus rhamnosus GG] gi|199591027|gb|EDY99110.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family protein [Lactobacillus rhamnosus HN001] gi|257147704|emb|CAR86677.1| Glutamate racemase [Lactobacillus rhamnosus GG] gi|259649124|dbj|BAI41286.1| glutamate racemase [Lactobacillus rhamnosus GG] Length = 484 Score = 308 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T Sbjct: 63 TKH-IKMLVIACNTATAAALPLIKARLK-IPVIGVIKPGSRAALKATQTGHIGIIATEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + + +++ S VE I K+ + + Sbjct: 121 VKSGAYPKALRAKAPDIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHQD 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTHYP++ + + + V +D+ LL + H Sbjct: 177 IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVPTHTY 236 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 + +G P + LK Sbjct: 237 YTTGAPSMFDELGESWLELK 256 >gi|148546010|ref|YP_001266112.1| glutamate racemase [Pseudomonas putida F1] gi|166231050|sp|A5VYG8|MURI_PSEP1 RecName: Full=Glutamate racemase gi|148510068|gb|ABQ76928.1| glutamate racemase [Pseudomonas putida F1] Length = 265 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + DSG+GGL VL +++ L+P +YVAD PYG +++R + Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPNETLLYVADCGHIPYGEKSPDYIRERCRHIAEFFH 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL Sbjct: 65 EQGAKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +++ ++G Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIETG----DLASPALRQMLQGYVQPLLAAGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + + P V +D ++AR+ R LL + + Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPNDVAIIDTGAAVARQLRRLLGANDLLAKGPAGAARFWT 239 Query: 253 SGKPDIAMRRL 263 S P+ + L Sbjct: 240 SADPEALRKIL 250 >gi|332522432|ref|ZP_08398684.1| glutamate racemase [Streptococcus porcinus str. Jelinkova 176] gi|332313696|gb|EGJ26681.1| glutamate racemase [Streptococcus porcinus str. Jelinkova 176] Length = 264 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 106/268 (39%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P + +Y+ D PYG +K+ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPYENIVYIGDSARAPYGPRPAEQIKE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + ++ K + V ACNTA + +E++ + LG + P A T +G Sbjct: 53 YTWELVNFLMTK-NVKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE +I+ KK + Sbjct: 111 RVGVIGTPMTVISDIYRQKIQLLAPAVEVTSLACPKFVPIVESN----EIQSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINS 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267 R + H + + P+ Sbjct: 226 GRYQEKVRHYFYTTASPETFQEIASVWL 253 >gi|304398949|ref|ZP_07380818.1| glutamate racemase [Pantoea sp. aB] gi|304353409|gb|EFM17787.1| glutamate racemase [Pantoea sp. aB] Length = 283 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 142/262 (54%), Gaps = 4/262 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKSETFIVERVVAIVE 77 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 I +Y L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T Sbjct: 78 AITQRYPLSLVIIACNTASTVSLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+RR YT L+ + C+I ++ S L E G ++ DE+++ ++ + Sbjct: 137 ATVRRPYTHELVAQFAGSCNIEMLGSAELVELAEAKLHGAEVALDEVRRIVQPWL--RMA 194 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 + D +VL CTH+PL+ +Q+ P +D+ +IARR LL + A Sbjct: 195 EPPDTVVLGCTHFPLLREELQQVLPEGTRLIDSGAAIARRTAWLLEHEAPEVNSSQQNVA 254 Query: 250 LFLSGKPD-IAMRRLMQGFGLK 270 + + + + ++Q +G Sbjct: 255 FCTALDGEAVQLSPVLQRYGFP 276 >gi|167461654|ref|ZP_02326743.1| glutamate racemase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322384236|ref|ZP_08057946.1| glutamate racemase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151128|gb|EFX44445.1| glutamate racemase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 268 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 8/253 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +I I DSG+GGL V++++ +P+ IY D PYG +K + + Sbjct: 1 MQQAIAILDSGVGGLTVVKEVMRQLPQEQIIYFGDSARSPYGPRPADEVKLFTRQVVDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + P + VIACNTA + +E+R ++ +G + P + A ++G I ++ T Sbjct: 61 IE-FHPKMIVIACNTATAVALEEIRQRV-AIPVVGVISPGARAAIKMARTGSIGVIGTDG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R + + +H S +LA VE+ +E + +E + K Sbjct: 119 TIRSGAYEETLKTISPTIQVHSQSCPLLAPMVEKGIFNG----EEALQVVESSLLPLLDK 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249 D ++L CTHYP + V ++ V +++++ AR +L N T F +H Sbjct: 175 SMDCLILGCTHYPYLADVIGKVMGPEVCLINSAEETAREVSTILQHQNQLATGKFRPEHR 234 Query: 250 LFLSGKPDIAMRR 262 F SG P + + Sbjct: 235 FFCSGDPVLFKKI 247 >gi|210614803|ref|ZP_03290332.1| hypothetical protein CLONEX_02546 [Clostridium nexile DSM 1787] gi|210150572|gb|EEA81581.1| hypothetical protein CLONEX_02546 [Clostridium nexile DSM 1787] Length = 275 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 105/265 (39%), Gaps = 15/265 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M IDN K + +FDSG+GGL V +++ +P + +Y D PYG+ + Sbjct: 1 MSIDN-----KNAAPVGVFDSGVGGLTVAREIMRQLPNENLVYFGDTARVPYGSKSRDNI 55 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + L VIACNTA L D +R + +G V P + A TQ Sbjct: 56 IRYSRQIIH-FLKTKGVKAIVIACNTASALALDVVREE-SDIPIIGVVEPGARAALQITQ 113 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I ++ T AT++ +I + + + VEE K+ E+ Sbjct: 114 TKKIGVIGTEATVQSAMYGKIIKGLDPTVSVIGKACPLFVPLVEEGFAKHKVTEE----I 169 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 I+ + D ++L CTHYPL+ R + ++ + A + +L Sbjct: 170 IDYYLASMKESDIDSLILGCTHYPLLRSRIRAYLGDKIQLVNPAYETAMDLKYILKESGM 229 Query: 240 HQTRVFDDHA---LFLSGKPDIAMR 261 +HA ++S D + Sbjct: 230 ENAGKEGEHATYSFYVSDAADKFKQ 254 >gi|186682253|ref|YP_001865449.1| glutamate racemase [Nostoc punctiforme PCC 73102] gi|186464705|gb|ACC80506.1| glutamate racemase [Nostoc punctiforme PCC 73102] Length = 288 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 108/269 (40%), Gaps = 9/269 (3%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 +D++ + + I IFDSG+GGL VL+++ +P +Y D PYG + Sbjct: 10 NLDDFSALEPQRAPIGIFDSGVGGLTVLRQIYRQLPNESIVYFGDTARLPYGIRSQAEIL 69 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 + + + L + Q + ++ACNT+ L + +R F ++ LG + P K A + Sbjct: 70 QFTREILT-WLQQQQVKMVIMACNTSSALALETVRQEF-NIPILGVILPGAKAAVQ--EG 125 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +++TPAT + + I + V +E+ +I + + Sbjct: 126 KRIGVIATPATAKSNAYKHAILEIAPDVQVWQVGCPEFVPLIEQN----RIHDPYTAEVA 181 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + D +V CTHYP + V R L P V +D + + L + Sbjct: 182 RAYLEPLLEQEIDTLVHGCTHYPHLTPVLRSLLPSQVKLVDPAVHVVAACAQELDLLGLK 241 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGL 269 T +SG P + +Q G Sbjct: 242 NTHPPLPTRFAVSGCPQQFSQSGVQWLGY 270 >gi|160881908|ref|YP_001560876.1| glutamate racemase [Clostridium phytofermentans ISDg] gi|160430574|gb|ABX44137.1| glutamate racemase [Clostridium phytofermentans ISDg] Length = 270 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 8/249 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +++I +FDSGIGGL V +++ +P+ IY D PYG+ + + +L Sbjct: 4 KSAIGVFDSGIGGLTVTKEIMNQLPKEQIIYFGDTARLPYGSKSKATITMYSRQIIRFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K VIACNTA + +R + +G + P K AA T++G I +++T T Sbjct: 64 TK-DVKAIVIACNTASAHALETVRKEI-EIPIIGVINPGAKVAAETTRNGNIGVIATEGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + + + + + VEE I ++ + + I+ K Sbjct: 122 IRSGIYNEFLGEIRPDLRVFGKACPLFVPLVEEGWIDDPITKEVVSRYIQELL----YKD 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250 D ++L CTHYPL+ V R++ ++ ++ + AR + +L +H Sbjct: 178 IDTLILGCTHYPLLRKVIREVVGDGIELVNPAYETARTLKHVLEEQKLLSEETTTPEHTF 237 Query: 251 FLSGKPDIA 259 F+S + Sbjct: 238 FVSDGAEKF 246 >gi|255282581|ref|ZP_05347136.1| glutamate racemase [Bryantella formatexigens DSM 14469] gi|255266874|gb|EET60079.1| glutamate racemase [Bryantella formatexigens DSM 14469] Length = 275 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 11/253 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++ + + IFDSG+GGL V +++ +PE +Y D PYG+ + + + Sbjct: 4 RERERPVGIFDSGVGGLTVTREVMRNIPEERIVYFGDTARVPYGSKSKETILRYSRQIVR 63 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128 +L + V+ACNTA +E+R P + +G V P K A A T++ I ++ T Sbjct: 64 FLLTQ-DVKAIVVACNTASAFALEEIRHELP-VPIIGVVRPGAKVACAATKNNRIGVIGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + LI + + + VEE + E+ ++ + G + Sbjct: 122 KGTIASGLYTELIRQIKPDAEVIGKACPLFVPLVEEGMMKDTVTEEVARRYLAG----LQ 177 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---- 244 + D ++L CTHYPL+ + ++ V ++ + A R LL + T Sbjct: 178 EQDIDTLILGCTHYPLLRSMIGKIMGEGVTLVNPAYETACSLRTLLIQEGLQNTEPLAEG 237 Query: 245 FDDHALFLSGKPD 257 + H ++S P+ Sbjct: 238 ENPHRFYVSDAPE 250 >gi|293572584|ref|ZP_06683558.1| glutamate racemase [Enterococcus faecium E980] gi|291607367|gb|EFF36715.1| glutamate racemase [Enterococcus faecium E980] Length = 270 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I DSG+GGL V+++ +P + ++V D PYG + + + ++ Sbjct: 4 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T Sbjct: 64 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + V + + ++ S VE + KK + K+ Sbjct: 122 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D ++L CTHYPL+ + + + V +D+ LL + + Sbjct: 178 IDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFHLSNSPQNGRTLCQ 237 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + +G + G+ Sbjct: 238 FYTTGSAKLFQEIAEDWLGI 257 >gi|229553813|ref|ZP_04442538.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family protein [Lactobacillus rhamnosus LMS2-1] gi|229312836|gb|EEN78809.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family protein [Lactobacillus rhamnosus LMS2-1] Length = 485 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L Sbjct: 4 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T Sbjct: 64 TKH-IKMLVIACNTATAAALPLIKARLK-IPVIGVIKPGSRAALKATQTGHIGIIATEGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + + +++ S VE I K+ + + Sbjct: 122 VKSGAYPKALRAKAPNIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHQD 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTHYP++ + + + V +D+ LL + H Sbjct: 178 IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVPTHTY 237 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 + +G P + LK Sbjct: 238 YTTGAPSMFDELGESWLELK 257 >gi|258538968|ref|YP_003173467.1| glutamate racemase [Lactobacillus rhamnosus Lc 705] gi|257150644|emb|CAR89616.1| Glutamate racemase [Lactobacillus rhamnosus Lc 705] Length = 484 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T Sbjct: 63 TKH-IKMLVIACNTATAAALPLIKARLK-IPVIGVIKPGSRAALKATQTGHIGIIATEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + + +++ S VE I K+ + + Sbjct: 121 VKSGAYPKALRAKAPNIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHQD 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTHYP++ + + + V +D+ LL + H Sbjct: 177 IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVPTHTY 236 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 + +G P + LK Sbjct: 237 YTTGAPSMFDELGESWLELK 256 >gi|253580902|ref|ZP_04858164.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847744|gb|EES75712.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 273 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 106/263 (40%), Gaps = 17/263 (6%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKID + I +FDSG+GGL V +++ +P +Y D PYG+ + Sbjct: 1 MKID-------REAPIGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKETI 53 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + L + Q V+ACNTA D +R F + +G + P K AAA T+ Sbjct: 54 IRYSRQII-RFLQQQQVKAIVVACNTASAFALDAVRDEF-DIPIIGVIEPGAKVAAAQTR 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + + I+ T T+ + + + + + + VEE + ++ Sbjct: 112 NKRVGIIGTVGTVGSGIHAEYLKHLDPEITVFGKACPLFVPLVEEGWLHDPVTDE----V 167 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 E + K+ D ++L CTHYPL+ R++ V ++ + A LL Sbjct: 168 AARYLKELQDKQVDTLILGCTHYPLLRSTIRKIMGDGVCLVNPAYETALELGRLLEEKGL 227 Query: 240 HQTRVFDD---HALFLSGKPDIA 259 + + ++S D Sbjct: 228 AGEGTEKNEFPYRFYVSDLADEF 250 >gi|323136843|ref|ZP_08071924.1| glutamate racemase [Methylocystis sp. ATCC 49242] gi|322398160|gb|EFY00681.1| glutamate racemase [Methylocystis sp. ATCC 49242] Length = 267 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 112/266 (42%), Positives = 167/266 (62%), Gaps = 6/266 (2%) Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + IL+FDSG+GGL V ++ + P ++Y ADD GFPYG+W++ L R+M + Sbjct: 1 MNRPPRILVFDSGLGGLTVFAEIVKIRPGADYVYCADDAGFPYGSWKEPELVDRVMKVME 60 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++ ++ P + VIACNTA TL+ LR+ +P + F+G VPAIK AA +++S +IS+L+TP Sbjct: 61 RLIAEHAPDMVVIACNTASTLVLPCLRARWPEIPFVGTVPAIKPAAEHSRSKMISVLATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ R YT NLI + + C + LV S LA E Y + ++EI EI CF E +G Sbjct: 121 GTVARDYTQNLIAQFAADCRVALVGSTTLARLAENYMHHGSVCDEEIAAEIAPCFQESDG 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFD 246 +RTDV+VLACTHYPL++ F++L+PWPV+W+D + +IARRA LL + + R Sbjct: 181 RRTDVVVLACTHYPLLLDAFQRLAPWPVEWIDPAPAIARRADQLLAGRFGRDESEPRAAP 240 Query: 247 DHALFLSG-KPDIAMRRLMQGFGLKS 271 A+F SG P +R + +GL + Sbjct: 241 GRAVFTSGAAPAPQLRETLARYGLAA 266 >gi|167031792|ref|YP_001667023.1| glutamate racemase [Pseudomonas putida GB-1] gi|189030364|sp|B0KNE7|MURI_PSEPG RecName: Full=Glutamate racemase gi|166858280|gb|ABY96687.1| glutamate racemase [Pseudomonas putida GB-1] Length = 265 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + DSG+GGL VL +++ L+P +YVAD PYG +++R + Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPNETLLYVADCGHVPYGEKSPDYIRQRCRHIAGFFH 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL Sbjct: 65 EQGAKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +++ + G Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIETG----DLTSPVLRQMLWGYVQPLLAAGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + + P V +D ++AR+ + LL + D + Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPADVAVIDTGAAVARQLQRLLGANDLLAEGPAGDARFWT 239 Query: 253 SGKPDIAMRRL 263 S P+I + L Sbjct: 240 SADPEILRKIL 250 >gi|125974438|ref|YP_001038348.1| glutamate racemase [Clostridium thermocellum ATCC 27405] gi|256005209|ref|ZP_05430177.1| glutamate racemase [Clostridium thermocellum DSM 2360] gi|281418963|ref|ZP_06249981.1| glutamate racemase [Clostridium thermocellum JW20] gi|125714663|gb|ABN53155.1| glutamate racemase [Clostridium thermocellum ATCC 27405] gi|255990863|gb|EEU00977.1| glutamate racemase [Clostridium thermocellum DSM 2360] gi|281407420|gb|EFB37680.1| glutamate racemase [Clostridium thermocellum JW20] gi|316941574|gb|ADU75608.1| glutamate racemase [Clostridium thermocellum DSM 1313] Length = 268 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 13/253 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSG+GGL VL++++ L+P +Y D PYG+ + K Sbjct: 1 MDNRP--------IGVFDSGLGGLTVLKEIKNLLPRESIVYFGDSGRAPYGSKSKETVVK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L++ + VIACNTA D+++++F P A T + Sbjct: 53 YTFQDIRFLLNQ-DIKMIVIACNTASACSLDQVKNSFDIPIVEVVGPGAATAVRETVNKK 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + ++ T AT+ I + I+ + + VEE I + E Sbjct: 112 VGVIGTVATVSSGVYEKAILKLDPEIEIYQKACPLFVPLVEEGWWENDIA----LRIAEE 167 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + + K D +VL CTHYPL+ + ++ V + ++ +A+ + ++ + N ++ Sbjct: 168 YLLPLKEKNIDTLVLGCTHYPLLYNTISKVMGDGVKLVSSALEVAKVVKEMIEKSNLNRD 227 Query: 243 RVFDDHALFLSGK 255 + + + Sbjct: 228 EKLNPVYRYYTSD 240 >gi|226946178|ref|YP_002801251.1| glutamate racemase [Azotobacter vinelandii DJ] gi|226721105|gb|ACO80276.1| glutamate racemase [Azotobacter vinelandii DJ] Length = 263 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 6/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + +FDSG+GGL VL ++R +P YVAD PYG +++R + + +L Sbjct: 4 EAPVGVFDSGVGGLSVLSEIRARLPGESLFYVADSGHVPYGEKSSEYIRERCRHIAAFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA ELR +P + +G PA+K AAA T+SG + +L+T TL Sbjct: 64 ERGAKAL-VLACNTATAAAVAELRELYPELPVIGMEPAVKPAAAATRSGRVGVLATSGTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + L R+E + ++ + E Sbjct: 123 KSARFAALLDRFAGDVRVITQPCPGLVERIEAGDLDGPATRELLRGFVAPLLAE----GC 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + L P + +D ++AR+ LL + + Sbjct: 179 DTLILGCTHYPFVRPLLGTLVPDSISLIDTGAAVARQLERLLQERDLLAAGPAAA-RFWS 237 Query: 253 SGKPDIAMRRLMQGFGLKS 271 SG P R L +G + Sbjct: 238 SGDPLGLERVLPLLWGAPA 256 >gi|229588286|ref|YP_002870405.1| glutamate racemase [Pseudomonas fluorescens SBW25] gi|229360152|emb|CAY47009.1| putative peptidoglycan biosynthesis protein [Pseudomonas fluorescens SBW25] Length = 264 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 5/243 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL VL +++ L+P +YVAD PYG + +R + + Sbjct: 4 DAPIGVFDSGVGGLTVLDEIQQLLPHESLLYVADCGHIPYGEKSPAFILERSRRVAAFF- 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + VIACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL Sbjct: 63 REQGAKAFVIACNTATVAAVADLRLDFPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +++ ++ Sbjct: 123 QSAKFAALLDRFATDVKVVTQPCPGLVELIESG----DLNSPALRQLLQRYIEPLLSAGC 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTHYP + + Q+ P + +D ++AR+ + LL + + + Sbjct: 179 DTIILGCTHYPFLKPLLAQMLPPSIILIDTGAAVARQLKRLLGERDLLAVGSPEPAQFWT 238 Query: 253 SGK 255 SG Sbjct: 239 SGD 241 >gi|271502433|ref|YP_003335459.1| glutamate racemase [Dickeya dadantii Ech586] gi|270345988|gb|ACZ78753.1| glutamate racemase [Dickeya dadantii Ech586] Length = 290 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 144/268 (53%), Gaps = 11/268 (4%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 N P ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R+ Sbjct: 22 NRP-------TVLVFDSGVGGLSVYDEVRKLLPDLHYIYAFDNEAFPYGEKPEQFIIERV 74 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + + + ++ L +IACNTA T+ LR+ F +G VPA+K AA T++G++ Sbjct: 75 LSIVEAVEKQHPLSLVIIACNTASTISLPALRTRF-DFPVVGVVPAVKPAAKLTRNGVVG 133 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+T AT++R+YT LI + C I L+ S L E G + ED ++K + Sbjct: 134 LLATRATVQRSYTHELISRFAHDCQILLLGSAELVEFAEAKLQGESVSEDVLRKILRPWL 193 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 K + D +VL CTH+PL+ + + P +D+ +IARR L+ ++ + Sbjct: 194 --KLPEPPDTVVLGCTHFPLLTEELQHVLPDGTRLVDSGSAIARRTAWLIEHLDNPKCST 251 Query: 245 FDDHALFLSGKPDI-AMRRLMQGFGLKS 271 + A LS P + A+ +++ +G S Sbjct: 252 EKNLAYCLSITPKVAALWPVLRRYGFHS 279 >gi|227329569|ref|ZP_03833593.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 285 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 140/266 (52%), Gaps = 4/266 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + +IL+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++ Sbjct: 17 PSNLPSRPTILVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L Sbjct: 77 IVNAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT++R YT LI + + C I + S L E G I E++K + Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAESKLQGETISISELQKILRPWL-- 193 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + + D +VL CTH+PL+ + P +D+ +IA+R L+ ++ Sbjct: 194 RLPEPPDTVVLGCTHFPLLAEELKMALPDGTRLVDSGAAIAKRTAWLIANLDNPPLSTDK 253 Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271 + L+ P +A + ++Q +G S Sbjct: 254 NLVYCLAITPKVATLWPILQRYGFDS 279 >gi|261819555|ref|YP_003257661.1| glutamate racemase [Pectobacterium wasabiae WPP163] gi|261603568|gb|ACX86054.1| glutamate racemase [Pectobacterium wasabiae WPP163] Length = 285 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 83/272 (30%), Positives = 143/272 (52%), Gaps = 4/272 (1%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 + ++ P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + Sbjct: 11 ISLEAIPSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + S + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++ Sbjct: 71 IERVVEIVSAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T AT++R YT LI + + C I + S L E G I E++K + Sbjct: 130 GVVGLLATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQKIL 189 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + D +VL CTH+PL+ + P +D+ +IA+R L+ ++ Sbjct: 190 RPWL--RLPEPPDTVVLGCTHFPLLAEELKMALPEGTRLVDSGAAIAKRTAWLIANLDNP 247 Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + L+ P +A + ++Q +G S Sbjct: 248 PLSTDKNLVYCLTITPKVATLWPILQRYGFDS 279 >gi|116494343|ref|YP_806077.1| bifunctional glutamate racemase/xanthosine/inosine pyrophosphatase [Lactobacillus casei ATCC 334] gi|116104493|gb|ABJ69635.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family [Lactobacillus casei ATCC 334] Length = 484 Score = 306 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 8/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T Sbjct: 63 KKH-IKMLVIACNTATAAALPLIKANL-DIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + + + +++ S VE I K+ + + Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHED 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250 D ++L CTHYP++ + + + V +D+ LL + + + H Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236 Query: 251 FLSGKPDIAMRRLMQGFGLKS 271 + +G P + L + Sbjct: 237 YTTGAPSMFDELGEAWLELTA 257 >gi|295397445|ref|ZP_06807532.1| glutamate racemase [Aerococcus viridans ATCC 11563] gi|294974346|gb|EFG50086.1| glutamate racemase [Aerococcus viridans ATCC 11563] Length = 287 Score = 306 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 10/263 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E + I DSG+GGL V+++ +P IY+ D+ PYG + + Sbjct: 7 EVNMNRPIGFLDSGVGGLTVVKEAMRQLPNESIIYIGDNARCPYGPRSVEEIAAFTNQMV 66 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 +L K L VIACNTA + DE++ S+ +G + P + A YT++G I +L Sbjct: 67 DFLLTK-DIKLLVIACNTATAVALDEIKQRV-SIPVIGVIQPGARAANKYTKNGKIGVLG 124 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + + ++ VE + KK I Sbjct: 125 TEGTIKSGMYLENLLQKNKDLNTTSLACPAFVPLVESQQYATPLA----KKVIAETLAPI 180 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + K D ++L CTHYPL+ ++ V +D+ LL + + Sbjct: 181 KNKGLDTVILGCTHYPLLRDTIQKTLGHTVKLIDSGQETISDVSILLDYNDIAKLSNDPS 240 Query: 248 ---HALFLSGKPDIAMRRLMQGF 267 + +G P++ Sbjct: 241 PRMTEFYTTGSPELFKEIADDWL 263 >gi|259047138|ref|ZP_05737539.1| glutamate racemase [Granulicatella adiacens ATCC 49175] gi|259036188|gb|EEW37443.1| glutamate racemase [Granulicatella adiacens ATCC 49175] Length = 482 Score = 306 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 103/260 (39%), Gaps = 10/260 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I DSG+GGL VL++ +P +++ D PYG +++ + + + Sbjct: 1 MKRPIGFIDSGVGGLTVLKEALKQLPNESMVFLGDSARCPYGTRPKEEIRQYTLEMVQFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L K + VIACNTA ++ +EL+ T + +G + P A T + I +L T A Sbjct: 61 LQK-NIKMLVIACNTATAVVLEELKQTL-EIPVVGVIQPGSLAAIKQTSNDRIGVLGTNA 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ +H + ++ VE + +K+ + EG Sbjct: 119 TISSKVYPKTMHDKNKNIQVFDIACPNFVPLVENNQSDTPEAWEIVKETLN----PLEGT 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDD 247 D ++L CTHYPL+ +++ V +D+ LL T +T Sbjct: 175 NVDTVILGCTHYPLLRKTIQKVVGNQVSLIDSGAETVSSVSALLDYCKLSETPETNPNPT 234 Query: 248 HALFLSGKPDIAMRRLMQGF 267 ++ +G + Sbjct: 235 LEIYTTGDATLFEEIAENWL 254 >gi|329116659|ref|ZP_08245376.1| glutamate racemase [Streptococcus parauberis NCFD 2020] gi|326907064|gb|EGE53978.1| glutamate racemase [Streptococcus parauberis NCFD 2020] Length = 264 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++R +P + +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELRRQLPHENIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + V ACNTA + +E++ S+ LG + P A T + Sbjct: 53 FTWDLVNFLLTK-DVKMIVFACNTATAVAWEEVKEAL-SIPVLGVILPGSSAAIKSTTNR 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE +IK KK + Sbjct: 111 KVGVIGTPMTVSSNIYQEKIQLLAPMLSVISLACPKFVPIVESN----EIKSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 DTLSPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPGVKLIDSGAECVRDISVLLNYFQINA 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + +H + + + Sbjct: 226 NPKEIEKNHRFYTTAGVESFQEIATDWL 253 >gi|227534493|ref|ZP_03964542.1| glutamate racemase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187892|gb|EEI67959.1| glutamate racemase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 484 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 8/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T Sbjct: 63 KKH-IKMLVIACNTATAAALPLIKANL-DIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + + + +++ S VE I K+ + + Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHED 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250 D ++L CTHYP++ + + + V +D+ LL + + + H Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236 Query: 251 FLSGKPDIAMRRLMQGFGLKS 271 + +G P + L + Sbjct: 237 YTTGAPSMFDELGEAWLELTA 257 >gi|55822242|ref|YP_140683.1| glutamate racemase [Streptococcus thermophilus CNRZ1066] gi|116627188|ref|YP_819807.1| glutamate racemase [Streptococcus thermophilus LMD-9] gi|81559855|sp|Q5M1I5|MURI_STRT1 RecName: Full=Glutamate racemase gi|122268209|sp|Q03MG1|MURI_STRTD RecName: Full=Glutamate racemase gi|55738227|gb|AAV61868.1| glutamate racemase [Streptococcus thermophilus CNRZ1066] gi|116100465|gb|ABJ65611.1| glutamate racemase [Streptococcus thermophilus LMD-9] Length = 271 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 18/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K + VIACNTA ++ +E++ + + LG V P A ++SG Sbjct: 53 YTWQLVKFLLTK-DVKMIVIACNTATAVVWEEIKESL-DIPVLGVVLPGSSAAIKSSRSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I Q ++ +S A VE +I KK + Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ESMAPLVD-RVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268 +R D + + Q G Sbjct: 226 SREVKDKTEEYYTTASVLGFKEIAEQWLG 254 >gi|154503523|ref|ZP_02040583.1| hypothetical protein RUMGNA_01347 [Ruminococcus gnavus ATCC 29149] gi|153795623|gb|EDN78043.1| hypothetical protein RUMGNA_01347 [Ruminococcus gnavus ATCC 29149] Length = 276 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 14/263 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ++ +K + I +FDSG+GGL V++++ +P + +Y D PYG+ + Sbjct: 1 MSME----CEKKKAPIGVFDSGVGGLTVVREITRQLPHENIVYFGDTARVPYGSKSKSNI 56 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + L Q VIACNTA L D +R F + +G + P + A T Sbjct: 57 IRFSEQII-RFLKTKQVKAIVIACNTASALALDAVRDEF-DIPIIGVIVPGARAAVEATA 114 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 +G I ++ T AT++ + +IH H+ + + VEE + E+ Sbjct: 115 NGEIGVVGTDATVKSGTYTKVIHQMDPNIHVREKACPLFVPLVEEGFKEHVVTEE----V 170 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PR 236 IE + D ++L CTHYPL+ R + ++ + A + LL Sbjct: 171 IEYYLESLKHTEIDAMILGCTHYPLLRSKIRSYMGERIQIVNPAYETAMDLKRLLQSEDM 230 Query: 237 INTHQTRVFDDHALFLSGKPDIA 259 N + + ++S + Sbjct: 231 ENDGEEGTSSKYEFYVSDAAEKF 253 >gi|191637675|ref|YP_001986841.1| Glutamate racemase [Lactobacillus casei BL23] gi|190711977|emb|CAQ65983.1| Glutamate racemase [Lactobacillus casei BL23] gi|327381734|gb|AEA53210.1| Ribonuclease PH/Ham1 protein [Lactobacillus casei LC2W] gi|327384898|gb|AEA56372.1| Ribonuclease PH/Ham1 protein [Lactobacillus casei BD-II] Length = 484 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 8/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T Sbjct: 63 KKH-IKMLVIACNTATAAALPLIKANL-DIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + + + +++ S VE I K+ + + Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHED 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250 D ++L CTHYP++ + + + V +D+ LL + + + H Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236 Query: 251 FLSGKPDIAMRRLMQGFGLKS 271 + +G P + L + Sbjct: 237 YTTGAPSMFDELGEAWLELTA 257 >gi|301065854|ref|YP_003787877.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family [Lactobacillus casei str. Zhang] gi|300438261|gb|ADK18027.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family [Lactobacillus casei str. Zhang] Length = 484 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 8/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T Sbjct: 63 KKH-IKMLVIACNTATAAALPLIKANL-DIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + + + +++ S VE I K+ + + Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHED 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250 D ++L CTHYP++ + + + V +D+ LL + + + H Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236 Query: 251 FLSGKPDIAMRRLMQGFGLKS 271 + +G P + L + Sbjct: 237 YTTGAPSMFDELGEAWLELTA 257 >gi|146296395|ref|YP_001180166.1| glutamate racemase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409971|gb|ABP66975.1| glutamate racemase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 267 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 14/253 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I IFDSG+GGL V +++ LMP +Y D PYG+ + K Sbjct: 1 MDTRP--------IGIFDSGLGGLTVFKEIVNLMPNESIVYFGDTARIPYGSKSKETVTK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 M +L K + V+ACNTA + L+ F P + AA T++ Sbjct: 53 FAMQNTRFLLSK-NIKIVVVACNTASAYAYEFLKGQFDIPIIAVIEPGARAAALATKNKK 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + ++ T T+ I + + + VEE ++ K+ +E Sbjct: 112 VGVIGTEGTIASGSFEKKILEFDPDIKVFSKPCPLFVPLVEEGWIDKEVTYLVAKEYLE- 170 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 E + K D +VL CTHYP + +V +++ P V ++ + A++ +L + N T Sbjct: 171 ---EFKEKGIDTLVLGCTHYPFLQNVIKKILPE-VTLINPALETAKQTYEVLKQNNMLNT 226 Query: 243 RVFDDHALFLSGK 255 + F + Sbjct: 227 SDEEPTYYFYASD 239 >gi|195978747|ref|YP_002123991.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975452|gb|ACG62978.1| glutamate racemase MurI [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 292 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 101/268 (37%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+ ++ +P IY+ D PYG +++ Sbjct: 29 MDNRP--------IGFLDSGVGGLTVVSELMRQLPHEKIIYIGDSARAPYGPRPAEQIRE 80 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K+ + V ACNTA + +E++ + LG + P A T G Sbjct: 81 YTWELVRFLLTKH-VKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGASAAIKATSGG 138 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ T T+ I + ++ VE +I KK + Sbjct: 139 KVGVIGTSMTISSGIYQEKIQLLAPTVQVTSLACPRFVPIVESN----EISSSVAKKIVY 194 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 195 ETLAPLVGK-IDTLVLGCTHYPLLRTIIQNVLGPQVKLIDSGAECVRDISVLLNYFEING 253 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 +R + H + + D Sbjct: 254 SRDDEHRRHHFYTTAGSDSFQAIASAWL 281 >gi|167747288|ref|ZP_02419415.1| hypothetical protein ANACAC_02002 [Anaerostipes caccae DSM 14662] gi|167653266|gb|EDR97395.1| hypothetical protein ANACAC_02002 [Anaerostipes caccae DSM 14662] Length = 272 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 6/249 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V +++ +P+ IY D PYG + + + + +L Sbjct: 7 NAPIGVFDSGVGGLTVAREIMRQLPDESLIYFGDTARVPYGTKSKDTVIRYSRQIVNFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA L +L+ + P AA T++ I I+ T AT+ Sbjct: 67 SK-NVKAIVIACNTASALAMHKLQQEYIVPMIGMVRPGAIAAARATKNHHIGIIGTNATV 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + + VEE +I ED + + + E + + Sbjct: 126 KSGQYGKYLRELNPDVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYLR----EFDQYQI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251 D ++L CTHYPL+ + + V ++ + A+ R LL ++ ++ + Sbjct: 182 DSLILGCTHYPLLQNPIKNFVGDNVTLINPAYETAKSLRELLKEREMEAESGHTAEYHYY 241 Query: 252 LSGKPDIAM 260 +S D + Sbjct: 242 VSDMEDQFL 250 >gi|157373001|ref|YP_001480990.1| glutamate racemase [Serratia proteamaculans 568] gi|167017321|sp|A8GL72|MURI_SERP5 RecName: Full=Glutamate racemase gi|157324765|gb|ABV43862.1| glutamate racemase [Serratia proteamaculans 568] Length = 287 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 144/262 (54%), Gaps = 4/262 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + ++L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S Sbjct: 23 KTRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIVSA 82 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + ++ + +IACNTA T+ LR F + +G VPAIK AA T +G++ +L+T Sbjct: 83 VQQRHPLAIVIIACNTASTVSLPALRERF-TFPVVGVVPAIKPAARLTANGVVGLLATRG 141 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++RTYT LI + + C I L+ S L E G + +KK + +E Sbjct: 142 TVQRTYTHELIARFATDCKIELLGSSELVELAEAKLHGEAVPLPTLKKILHPWLSMREP- 200 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTH+PL+ Q+ P +D+ +IARR L+ + D+ A Sbjct: 201 -PDTVVLGCTHFPLLAEELMQVLPEGTRLIDSGAAIARRTAWLISTQENLVSTQEDNLAY 259 Query: 251 FLSGKPDI-AMRRLMQGFGLKS 271 ++ D A+ ++QG+G KS Sbjct: 260 CMALNEDTDALLPVLQGYGFKS 281 >gi|50123157|ref|YP_052324.1| glutamate racemase [Pectobacterium atrosepticum SCRI1043] gi|81643623|sp|Q6CZB6|MURI_ERWCT RecName: Full=Glutamate racemase gi|49613683|emb|CAG77134.1| glutamate racemase [Pectobacterium atrosepticum SCRI1043] Length = 285 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 84/272 (30%), Positives = 143/272 (52%), Gaps = 4/272 (1%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 + ++ P + +IL+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + Sbjct: 11 ISLEAIPSNLPSRPTILVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + S + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++ Sbjct: 71 IERVVEIVSAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T AT++R YT LI + + C I + S L E G I E++K + Sbjct: 130 GVVGLLATRATVQRPYTHELITRFATDCQILSLGSSELVELAEAKLQGEAISISELQKIL 189 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + D +VL CTH+PL+ + + P +D+ +IA+R L+ ++ Sbjct: 190 RPWL--RLTEPPDTVVLGCTHFPLLAEELKMVLPEGTRLVDSGAAIAKRTAWLIANLDNP 247 Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + L P +A + ++Q +G S Sbjct: 248 PLSTDRNLVYCLKITPKVATLWPILQRYGFNS 279 >gi|312277667|gb|ADQ62324.1| Glutamate racemase [Streptococcus thermophilus ND03] Length = 271 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 110/269 (40%), Gaps = 18/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K + VIACNTA ++ +E++ + LG V P A ++SG Sbjct: 53 YTWQLVKFLLTK-DVKMIVIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSRSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I Q ++ +S A VE +I KK + Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ESMAPLVD-RVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268 +R D + + Q G Sbjct: 226 SREVKDKTEEYYTTASVLGFKEIAEQWLG 254 >gi|308188582|ref|YP_003932713.1| glutamate racemase [Pantoea vagans C9-1] gi|308059092|gb|ADO11264.1| Glutamate racemase [Pantoea vagans C9-1] Length = 283 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 141/262 (53%), Gaps = 4/262 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKSETFIVERVVAIVE 77 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 I +Y L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T Sbjct: 78 AITQRYPLSLVIIACNTASTVSLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+RR YT L+ + C+I ++ S L E G ++ DE+++ ++ + Sbjct: 137 ATVRRPYTHELVSQFAGSCNIEMLGSAELVELAEAKLHGAEVALDEVRRIVQPWL--RMA 194 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 + D +VL CTH+PL+ +Q+ P +D+ +IARR LL + A Sbjct: 195 EPPDTVVLGCTHFPLLREELQQVLPEGTRLIDSGAAIARRTVWLLEHEAPQIHSSQQNVA 254 Query: 250 LFLSGKPD-IAMRRLMQGFGLK 270 + + + ++Q +G Sbjct: 255 FCTELDGEAVQLSPILQRYGFP 276 >gi|330811716|ref|YP_004356178.1| glutamate racemase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379824|gb|AEA71174.1| Glutamate racemase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 263 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 5/244 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL VL ++R L+P +YVAD PYG +++R + +L Sbjct: 3 EAPIGVLDSGVGGLSVLGEIRQLLPNESLLYVADCGHIPYGEKTPEYIRQRCSIIADFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL Sbjct: 63 GQGAKAL-VVACNTATVAAVADLRRDFPHWPIVGMEPAVKPAAAATRSGIVGVLATTGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + + + ++ Sbjct: 122 QSAKFAALLDRFATDVRVITQPCPGLVELIETG----DLHSPALYQLLQHYVDPLLAAGC 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + ++ P + +D ++AR+ + LL + + Sbjct: 178 DTLILGCTHYPFLKPLLARMIPEHISLIDTGAAVARQLQRLLAERELLAEGPAGETYFWT 237 Query: 253 SGKP 256 S P Sbjct: 238 SADP 241 >gi|319408556|emb|CBI82209.1| Glutamate racemase [Bartonella schoenbuchensis R1] Length = 270 Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 130/259 (50%), Positives = 177/259 (68%), Gaps = 1/259 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL V++++R L+ E+ FIYVADD GFPYG W + ALK+R++ +F+++L Sbjct: 3 ERPLLFFDSGIGGLTVVEEVRALISEFQFIYVADDAGFPYGIWSEDALKQRILKIFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y P+L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SGLIS+L+TP T+ Sbjct: 63 KLYNPILCVIACNTASTLVITDLRRKFPNILFVGTVPAIKLAAKKTKSGLISVLATPGTI 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI S+ +QCH+ LV S LA E Y G I + E++ EI CF+EK GK T Sbjct: 123 QRAYTHKLIDSFANQCHVQLVGSTKLAGFAENYLRGNPIDDKELRHEILPCFVEKNGKYT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTHQTRVFDDHALF 251 DVIVLACTHYP ++++F + + WPV W+D + +IARR R LL I + +D ALF Sbjct: 183 DVIVLACTHYPFLINLFHKQALWPVSWIDPAKAIARRTRSLLLEEIQNKNIKKHEDCALF 242 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S +A L+Q FG Sbjct: 243 TSQTIGVATEHLLQKFGFS 261 >gi|319898917|ref|YP_004159010.1| Glutamate racemase [Bartonella clarridgeiae 73] gi|319402881|emb|CBI76432.1| Glutamate racemase [Bartonella clarridgeiae 73] Length = 273 Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 130/262 (49%), Positives = 179/262 (68%), Gaps = 4/262 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL VL+K+R +PEY FIY+ADD FPYG WE+ L++R++ +F+ +L Sbjct: 3 EKPLLFFDSGIGGLTVLRKVRLFVPEYQFIYIADDAAFPYGVWEEEILRRRILKIFAYLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y PVL VIACNTA TLI ++LR FP++ F+G VPAIK AA T+SG+IS+L+TP T+ Sbjct: 63 KLYNPVLCVIACNTASTLIIEDLRQEFPNICFVGTVPAIKLAAEQTKSGIISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI+S+ QCH+ LV S LA E Y G I E+E++ EI CFIEK GK T Sbjct: 123 KRAYTHELINSFAGQCHVQLVGSEKLAGFAENYLRGYPINEEELRHEILPCFIEKNGKLT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRVFDDH 248 D++VLACTHYP ++++FR+ + WPVDW+D + ++A+R R LLP ++ + D Sbjct: 183 DIVVLACTHYPFLINLFREQALWPVDWIDPAKAVAKRIRSLLPILPIKMQNKNMKKHKDF 242 Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270 ALF S + L+Q F L Sbjct: 243 ALFTSQNISSSTEYLLQKFQLN 264 >gi|56751751|ref|YP_172452.1| glutamate racemase [Synechococcus elongatus PCC 6301] gi|81301170|ref|YP_401378.1| glutamate racemase [Synechococcus elongatus PCC 7942] gi|56686710|dbj|BAD79932.1| glutamate racemase [Synechococcus elongatus PCC 6301] gi|81170051|gb|ABB58391.1| glutamate racemase [Synechococcus elongatus PCC 7942] Length = 289 Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 9/259 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL++++ +P F+Y D PYG +++ + + D + Sbjct: 14 APIGVFDSGVGGLTVLRELQRQLPHESFLYFGDTARLPYGTRSPAEIRQFVREIL-DWMQ 72 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 L V+ACNT+ L + LR + +M +G + PA + A + I +++T AT Sbjct: 73 AEGCKLVVMACNTSSALALEALRGDY-TMPLIGLIQPAARVAVQ--RGQRIGVIATAATA 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + VE+ +I + + + + Sbjct: 130 QSRAYRQALREANPNVQVWEIGCPEFVPLVEQQ----RIHDPQTLQVAAQYLAPLIEAQV 185 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++ CTHYP + V +QL P LD ++++ R + L + T + Sbjct: 186 DTLIYGCTHYPHLAPVIQQLLPSSTHLLDPAEAVTRSVQMELEVLGLSHTSKASTVRFCV 245 Query: 253 SGKPDIAMRRLMQGFGLKS 271 S P + + G ++ Sbjct: 246 SHDPQHFSLAIERWLGFQA 264 >gi|260584033|ref|ZP_05851781.1| glutamate racemase [Granulicatella elegans ATCC 700633] gi|260158659|gb|EEW93727.1| glutamate racemase [Granulicatella elegans ATCC 700633] Length = 480 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 104/263 (39%), Gaps = 10/263 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + +I DSG+GGL VL++ +P I++ D PYGN ++K + Sbjct: 1 MNNMSKAIGFIDSGVGGLTVLKEALKQLPHESMIFLGDSARCPYGNRTVEEIRKFTKEMV 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 +L K + VIACNTA +I +EL+ T + +G + P A T+S I++L Sbjct: 61 QFLLKK-DVKMIVIACNTATAVILEELQETL-DIPVVGVIQPGSLAAIKQTKSQKIAVLG 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++ I Q + + VE I KK + Sbjct: 119 THATIQSDVYRKTIQKKNHQLMVTSLECPKFVPLVESNQTDSPIA----KKVVAQTLQPL 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRV 244 GK D ++L CTHYPL+ + + V +D+ LL ++T Sbjct: 175 MGKEFDTLILGCTHYPLLKQRIQAVVGPQVTLIDSGAETVSTVSALLDFNYLAENYETNP 234 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 ++ +G P + Sbjct: 235 SPTLEIYTTGSPILFKEIAENWL 257 >gi|322411173|gb|EFY02081.1| glutamate racemase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 264 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K + V ACNTA + +E++ + LG + P A T G Sbjct: 53 YTWDLVRFLLTK-NVKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE +I+ KK + Sbjct: 111 QVGVIGTPMTIASDIYRQKIQLLAPTVEVTSLACPKFVPIVESN----EIRSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 167 ESLTPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEING 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 +R + H + + P+I Sbjct: 226 SRCQEKVKHHFYTTASPEIFQEIASVWL 253 >gi|262041735|ref|ZP_06014926.1| glutamate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040922|gb|EEW42002.1| glutamate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 260 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 139/257 (54%), Gaps = 6/257 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRYS 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Y Sbjct: 62 LALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S L E G + +E+++ + +E D +V Sbjct: 121 TRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSG 254 L CTH+PL+ +++ P +D+ +IARR LL ++ A L+ Sbjct: 179 LGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPDAKSSDENKAFCMALTA 238 Query: 255 KPDIAMRRLMQGFGLKS 271 + + + +++ +G + Sbjct: 239 ETEQLL-PVLRRYGFST 254 >gi|152972756|ref|YP_001337902.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330001329|ref|ZP_08303946.1| hypothetical protein HMPREF9538_01616 [Klebsiella sp. MS 92-3] gi|150957605|gb|ABR79635.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328537720|gb|EGF63925.1| hypothetical protein HMPREF9538_01616 [Klebsiella sp. MS 92-3] Length = 260 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 139/257 (54%), Gaps = 6/257 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Y Sbjct: 62 LALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S L E G + +E+++ + +E D +V Sbjct: 121 TRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSG 254 L CTH+PL+ +++ P +D+ +IARR LL ++ A L+ Sbjct: 179 LGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPDAKSSDENKAFCMALTA 238 Query: 255 KPDIAMRRLMQGFGLKS 271 + + + +++ +G + Sbjct: 239 ETEQLL-PVLRRYGFST 254 >gi|239636354|ref|ZP_04677356.1| glutamate racemase [Staphylococcus warneri L37603] gi|239597709|gb|EEQ80204.1| glutamate racemase [Staphylococcus warneri L37603] Length = 265 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 101/262 (38%), Gaps = 7/262 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + Sbjct: 1 MNRPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRSGEEVKQFTTEIAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L++ P + +G + P + A T++ + IL T Sbjct: 61 VE-FDIKMLVIACNTATAVALEHLQNILP-IPVIGVIEPGARTAIMTTKNQNVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I ++ ++ VE+ + I + Sbjct: 119 TIKSEAYRKHIKRINPNVEVYGIACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D ++L CTHYPL+ + + AR LL N H + H Sbjct: 176 EADTVILGCTHYPLLYQPINDYFGGKKTVISSGLETAREVSALLTFSNEHASYTQHPPHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271 F +G + + G+ + Sbjct: 236 FFATGDTTHIENIIKEWLGMDT 257 >gi|313884172|ref|ZP_07817938.1| glutamate racemase [Eremococcus coleocola ACS-139-V-Col8] gi|312620619|gb|EFR32042.1| glutamate racemase [Eremococcus coleocola ACS-139-V-Col8] Length = 280 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 12/260 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I DSG GGL VL++ +P IY+ D PYG +++ + + + + +K Sbjct: 5 PIGFIDSGFGGLTVLKQSLKQLPNESSIYLGDSARAPYGVRSVDEIRRFIWQMTNFLREK 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-KQAAAYTQSGLISILSTPATLR 133 + VIACNT DE+R++ ++ +G + A + A T++ + I+ TPAT+ Sbjct: 65 G-IKMLVIACNTGAAAALDEIRASL-AIPVVGVIHAGSRAAILTTENNKVGIIGTPATIN 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + +IH +Q + + VEE ++ + E + + D Sbjct: 123 SDSYARIIHEKNAQLQVFSKACPDFVPIVEEN----QMVQPETMNTVANYLAPLKNAGVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-----RVFDDH 248 +VL CTHYP + ++ V+ +D+ LL N ++ ++ H Sbjct: 179 TLVLGCTHYPHLRPQIQEFMGPEVELIDSGVETINEVSALLDYFNLSRSAEDAQKMPPTH 238 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 + +G R G Sbjct: 239 TYYTTGSGAKFARFAQMWLG 258 >gi|167765980|ref|ZP_02438033.1| hypothetical protein CLOSS21_00471 [Clostridium sp. SS2/1] gi|317497209|ref|ZP_07955533.1| Asp/Glu/Hydantoin racemase [Lachnospiraceae bacterium 5_1_63FAA] gi|167712337|gb|EDS22916.1| hypothetical protein CLOSS21_00471 [Clostridium sp. SS2/1] gi|291558774|emb|CBL37574.1| glutamate racemase [butyrate-producing bacterium SSC/2] gi|316895454|gb|EFV17612.1| Asp/Glu/Hydantoin racemase [Lachnospiraceae bacterium 5_1_63FAA] Length = 267 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 8/251 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FDSG+GGL V +++ +PE IY D PYG + + + + + Sbjct: 1 MNAPIGVFDSGVGGLTVAREIMRQLPEESMIYFGDTARVPYGTKSKDTIVRYSRQIVNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L K VIACNTA L +L+ + ++ +G V P A T++ I I+ T A Sbjct: 61 LSKG-VKAVVIACNTASALALADLQELY-NVPIIGMVQPGAIAAMNATKNKNIGIIGTNA 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + + VEE +I ED + + + E + Sbjct: 119 TIKSGQYGQYLRKLDPSVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYLR----EFKQY 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 D ++L CTHYPL+++ ++ V ++ + +A+ + +L + + + + Sbjct: 175 DIDSLILGCTHYPLLINPIQRFVGDKVTLVNPAYEVAKTLKQMLAQRDMAASEDHTAKYE 234 Query: 250 LFLSGKPDIAM 260 ++S D + Sbjct: 235 YYVSDMADQFL 245 >gi|319745525|gb|EFV97827.1| glutamate racemase [Streptococcus agalactiae ATCC 13813] Length = 290 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 109/270 (40%), Gaps = 18/270 (6%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 +K+D+ P I DSG+GGL V+++M +PE I++ D PYG + Sbjct: 25 IKMDSRP--------IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQI 76 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 ++ + + +L K + VIACNTA + E++ + LG + P A T Sbjct: 77 REFTWQMVNFLLTK-NVKMIVIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTN 134 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 SG + I+ TP T++ I + + ++ VE ++ KK Sbjct: 135 SGKVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKV 190 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--I 237 + GK D ++L CTHYPL+ + + + V +D+ R LL I Sbjct: 191 VYETLSPLVGK-LDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEI 249 Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 N + H + + P Q Sbjct: 250 NHNWQNKHGGHHFYTTASPKGFKEIAEQWL 279 >gi|317471031|ref|ZP_07930406.1| Asp/Glu/Hydantoin racemase [Anaerostipes sp. 3_2_56FAA] gi|316901472|gb|EFV23411.1| Asp/Glu/Hydantoin racemase [Anaerostipes sp. 3_2_56FAA] Length = 272 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 6/249 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V +++ +P+ IY D PYG + + + + +L Sbjct: 7 NAPIGVFDSGVGGLTVAREIMRQLPDESMIYFGDTARVPYGTKSKDTVIRYSRQIVNFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA L +L+ + P AA T++ I I+ T AT+ Sbjct: 67 SK-NVKAIVIACNTASALAMHKLQQEYIVPMIGMVRPGAIAAARATKNHHIGIIGTNATV 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + + VEE +I ED + + + E + + Sbjct: 126 KSGQYGKYLRELNPDVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYLR----EFDQYQI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251 D ++L CTHYPL+ + + V ++ + A+ R LL ++ ++ + Sbjct: 182 DSLILGCTHYPLLQNPIKNFVGDNVTLINPAYETAKSLRELLKEREMEAESGHTAEYHYY 241 Query: 252 LSGKPDIAM 260 +S D + Sbjct: 242 VSDMEDQFL 250 >gi|153815937|ref|ZP_01968605.1| hypothetical protein RUMTOR_02182 [Ruminococcus torques ATCC 27756] gi|145846756|gb|EDK23674.1| hypothetical protein RUMTOR_02182 [Ruminococcus torques ATCC 27756] Length = 279 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 13/264 (4%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++D K + +FDSG+GGL V +++ +P + +Y D PYG+ + + Sbjct: 5 MQMD-----CKKTAPVGVFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTI 59 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + + L Q VIACNTA L D +R F +P + A T++ Sbjct: 60 IRFSEQII-RFLKTKQVKAIVIACNTASALALDAVRDEFDIPIMGVVIPGARAAVETTRN 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + ++ T AT++ + +I S + + + VEE + E+ I Sbjct: 119 QKVGVIGTDATVQSGMYTKVIQSMAPDIEVIEKACPLFVPLVEEGFKEHVVTEE----VI 174 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E + D ++L CTHYPL+ R + ++ + A + LL Sbjct: 175 EYYLESMRHTQIDAMILGCTHYPLLRSKIRDYLGEEIKIVNPAYETAMDLKKLLYEKEMA 234 Query: 241 QTRVFDDH---ALFLSGKPDIAMR 261 H + ++S + R Sbjct: 235 NDGTDAQHSVYSFYVSDAAEKFRR 258 >gi|24380092|ref|NP_722047.1| glutamate racemase [Streptococcus mutans UA159] gi|29839525|sp|Q8DSQ5|MURI_STRMU RecName: Full=Glutamate racemase gi|24378087|gb|AAN59353.1|AE015000_11 putative glutamate racemase [Streptococcus mutans UA159] Length = 264 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 18/270 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG +K Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKT 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + V ACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWELVNFLLTKK-VKMIVFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I I+ TP T++ I Q + ++ VE + KK + Sbjct: 111 QIGIIGTPMTIKSNIYEQKIRDLSPQMKVRSLACPKFVPIVESNKMNSSVA----KKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V+ +D+ R LL + ++ Sbjct: 167 ESLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPDVELIDSGAECVRDISVLLNYFDLNR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGL 269 +R H + + L Sbjct: 226 SRTSKVLHHRFYTTASVASFKEIASDWLPL 255 >gi|331089823|ref|ZP_08338716.1| glutamate racemase [Lachnospiraceae bacterium 3_1_46FAA] gi|330403520|gb|EGG83078.1| glutamate racemase [Lachnospiraceae bacterium 3_1_46FAA] Length = 275 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 13/264 (4%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M++D K + +FDSG+GGL V +++ +P + +Y D PYG+ + + Sbjct: 1 MQMD-----CKKTAPVGVFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTI 55 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + + L Q VIACNTA L D +R F +P + A T++ Sbjct: 56 IRFSEQII-RFLKTKQVKAIVIACNTASALALDAVRDEFDIPIMGVVIPGARAAVETTRN 114 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + ++ T AT++ + +I S + + + VEE + E+ I Sbjct: 115 QKVGVIGTDATVQSGMYTKVIQSMAPDIEVIEKACPLFVPLVEEGFKEHVVTEE----VI 170 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E + D ++L CTHYPL+ R + ++ + A + LL Sbjct: 171 EYYLESMRHTQIDAMILGCTHYPLLRSKIRDYLGEEIKIVNPAYETAMDLKKLLYEKEMA 230 Query: 241 QTRVFDDH---ALFLSGKPDIAMR 261 H + ++S + R Sbjct: 231 NDGTDAQHSVYSFYVSDAAEKFRR 254 >gi|291619386|ref|YP_003522128.1| MurI [Pantoea ananatis LMG 20103] gi|291154416|gb|ADD79000.1| MurI [Pantoea ananatis LMG 20103] Length = 283 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 141/262 (53%), Gaps = 4/262 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKTETFIVERVVAIVD 77 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 I ++ L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T Sbjct: 78 AITRRHPISLVIIACNTASTVTLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+RR+YT L+ + C I ++ S L E G ++ DEI++ ++ + Sbjct: 137 ATVRRSYTHELVSQFAKTCKIEMLGSAELVELAEAKLHGEEVSIDEIRRIVQPWL--RMA 194 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 + D +VL CTH+PL+ +Q+ P +D+ +IARR LL + A Sbjct: 195 EPPDTVVLGCTHFPLLRDELQQILPEGTRLIDSGAAIARRTAWLLENEAPEVRSSLQNVA 254 Query: 250 LFLSGKPD-IAMRRLMQGFGLK 270 + + + ++Q +G Sbjct: 255 FCTELDGEAVQLSPVLQRYGFP 276 >gi|49474225|ref|YP_032267.1| glutamate racemase [Bartonella quintana str. Toulouse] gi|81647061|sp|Q6FZU3|MURI_BARQU RecName: Full=Glutamate racemase gi|49239729|emb|CAF26111.1| Glutamate racemase [Bartonella quintana str. Toulouse] Length = 270 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 128/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IL FDSGIGGL VL+++R L+PE FIYVADD GFPYGNWE++ LK ++ +F+++L Sbjct: 3 ERPILFFDSGIGGLTVLREVRVLIPETQFIYVADDAGFPYGNWEENVLKNHILKVFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y P L V+ACNT TL+ +LR FP F+G VPAIK AA T+SG IS+L+TP T+ Sbjct: 63 TLYNPTLCVVACNTVSTLMMADLRKEFPHTLFVGTVPAIKLAAKQTKSGFISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI+S+ QCH+ LV S LA+ E+Y G I +E++ EI CF E+ GK T Sbjct: 123 KRAYTRELINSFAGQCHVQLVGSEKLAAFAEDYLRGKPIDLEELRNEILPCFFEQNGKYT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251 D IVLACTHYP ++++FR+ + WPV W+D + +IA+ R LLP R+ T+ D ALF Sbjct: 183 DTIVLACTHYPFLINLFREQALWPVKWIDPAKAIAKHIRSLLPERMYHKNTKKLKDFALF 242 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S + + L++ FGL Sbjct: 243 TSQNITSSTKHLLKEFGLN 261 >gi|253686599|ref|YP_003015789.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259509917|sp|C6DHQ3|MURI_PECCP RecName: Full=Glutamate racemase gi|251753177|gb|ACT11253.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 285 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 140/266 (52%), Gaps = 4/266 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++ Sbjct: 17 PSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L Sbjct: 77 IVNAVQLRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT++R YT LI + + C I + S L E G I E++K + Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQKILRPWL-- 193 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + + D +VL CTH+PL+ + P +D+ +IARR L+ ++ Sbjct: 194 RLPEPPDTVVLGCTHFPLLAEELKAALPDGTRLVDSGAAIARRTAWLIANLDNPPLSTDK 253 Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271 + L+ P +A + ++Q +G S Sbjct: 254 NLVYCLAITPKVATLWPILQRYGFDS 279 >gi|225867935|ref|YP_002743883.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus] gi|225871149|ref|YP_002747096.1| glutamate racemase [Streptococcus equi subsp. equi 4047] gi|254766125|sp|C0M7R0|MURI_STRE4 RecName: Full=Glutamate racemase gi|259509918|sp|C0MGG5|MURI_STRS7 RecName: Full=Glutamate racemase gi|225700553|emb|CAW95041.1| glutamate racemase [Streptococcus equi subsp. equi 4047] gi|225701211|emb|CAW98144.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus] Length = 264 Score = 304 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 101/268 (37%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+ ++ +P IY+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVSELMRQLPHEKIIYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K+ + V ACNTA + +E++ + LG + P A T G Sbjct: 53 YTWELVRFLLTKH-VKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGASAAIKATSGG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ T T+ I + ++ VE +I KK + Sbjct: 111 KVGVIGTSMTISSGIYQEKIQLLAPTVQVTSLACPRFVPIVESN----EISSSVAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 167 ETLAPLVGK-IDTLVLGCTHYPLLRTIIQNVLGPQVKLIDSGAECVRDISVLLNYFEING 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 +R + H + + D Sbjct: 226 SRDDEHRRHHFYTTAGSDSFQAIASAWL 253 >gi|163868315|ref|YP_001609524.1| glutamate racemase [Bartonella tribocorum CIP 105476] gi|189082952|sp|A9IU96|MURI_BART1 RecName: Full=Glutamate racemase gi|161017971|emb|CAK01529.1| Glutamate racemase [Bartonella tribocorum CIP 105476] Length = 275 Score = 304 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 127/261 (48%), Positives = 179/261 (68%), Gaps = 3/261 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL VL++ R L+PE FIYVADD GFPYGNWE++ LK+ ++ +F+++L Sbjct: 3 ERPVLFFDSGIGGLTVLREARVLIPEIQFIYVADDAGFPYGNWEENILKEHILNIFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +Y P L VIACNT TL+ +LR FP + F+G VPAIK AA T+SG IS+L+TP T+ Sbjct: 63 TRYNPALCVIACNTVSTLMMADLRQKFPHVPFVGTVPAIKSAAEQTKSGFISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT+ LI+S+ QCH+ LV S LA E++ G I + ++KEI CF++K GK T Sbjct: 123 KRAYTNELINSFAGQCHVQLVGSEKLAGFAEDHLRGKTIDSEALRKEILPCFVKKNGKCT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDDHA 249 DVIVLACTHYP +++ FR+ + W V+W+D + +IA+ R LLP +I+ + + D A Sbjct: 183 DVIVLACTHYPFLINFFREQALWSVEWIDPAKAIAKHIRSLLPLSEKIHQKPIKKYQDFA 242 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 L S + L++GFGLK Sbjct: 243 LLTSKNITASTEHLLKGFGLK 263 >gi|77920315|ref|YP_358130.1| glutamate racemase [Pelobacter carbinolicus DSM 2380] gi|77546398|gb|ABA89960.1| glutamate racemase [Pelobacter carbinolicus DSM 2380] Length = 266 Score = 304 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +I +FDSG+GGL VL++++ L+P +Y+ D PYG +++ + S Sbjct: 2 PDRAIGVFDSGVGGLTVLKEIQRLLPGEEVLYLGDTARVPYGTKSPATVRRYALEAAS-F 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + + + V+ACNTA ++ +L + F + +G + P ++A + T++G I ++ T Sbjct: 61 LTRRRVKMLVVACNTASSVALGDLENRFK-LPVIGVIEPGARRAVSVTRTGRIGVIGTEG 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I + + + VEE + + E Sbjct: 120 TIKSGAYTLAIKQLAPDADVVALHCPLFVPLVEEGWLDHPVT----RLAAEEYLGSLRHH 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 D +VL CTHYPL+ V +Q+ V +D+++ A L +++ + Sbjct: 176 GIDTLVLGCTHYPLLKPVLQQVLGPQVMLIDSAEETAIAVADRLQQLSHVRPLGEAIPPQ 235 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F++ P+ R + G Sbjct: 236 FFVTDVPERFQRVGGEFLG 254 >gi|172058162|ref|YP_001814622.1| glutamate racemase [Exiguobacterium sibiricum 255-15] gi|229486273|sp|B1YJW7|MURI_EXIS2 RecName: Full=Glutamate racemase gi|171990683|gb|ACB61605.1| glutamate racemase [Exiguobacterium sibiricum 255-15] Length = 271 Score = 304 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + SI + DSG+GGL V +++ +P IYV D + PYG + +++ + + Sbjct: 1 MNRSIGVLDSGVGGLTVARELMRQLPHEQIIYVGDTLRCPYGPRPEEEIRQFTWEMIDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + + L VIACNTA ++ E R S+ +G + P + A T+S I ++ T Sbjct: 61 VAQG-VKLIVIACNTATAVVLKEARQKL-SIPVIGVIDPGARAAVKVTRSKRIGVIGTKM 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + Q + +S VE + +++ + Sbjct: 119 TIESNSYEKALRHVEGQVVVESLSCPPFVPLVES----SQTSGPYVERVVANTLKPLLSY 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249 D ++L CTHYPL+ V ++ V + + D A LL +H Sbjct: 175 DMDTLILGCTHYPLLAEVIGRVIGPNVQLISSGDETALEVSALLDYNGITADLDRIPEHV 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 +G R Sbjct: 235 YHATGDTRSFERIASDWL 252 >gi|227113199|ref|ZP_03826855.1| glutamate racemase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 285 Score = 304 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 140/266 (52%), Gaps = 4/266 (1%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++ Sbjct: 17 PSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L Sbjct: 77 IVNAVQLRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT++R YT LI + + C I + S L E G I E+++ + Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQRILRPWL-- 193 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + + D +VL CTH+PL+ + P +D+ +IA+R L+ ++ Sbjct: 194 RLPEPPDTVVLGCTHFPLLAEELKMALPDGTRLVDSGSAIAKRTAWLIANLDNPPLSTDK 253 Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271 + L+ P +A + ++Q +G S Sbjct: 254 NLVYCLTITPKVATLWPILQRYGFDS 279 >gi|251781827|ref|YP_002996129.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390456|dbj|BAH80915.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 265 Score = 304 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 2 MDTRP--------IGFLDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIRE 53 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K + V ACNTA + +E++ + LG + P A T G Sbjct: 54 YTWDLVRFLLTK-NVKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKG 111 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE +I+ KK + Sbjct: 112 QVGVIGTPMTIASDIYRQKIQLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVY 167 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 168 ESLTPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEING 226 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 +R + H + + P+I Sbjct: 227 SRCQEKVKHHFYTTASPEIFQEIASVWL 254 >gi|170723614|ref|YP_001751302.1| glutamate racemase [Pseudomonas putida W619] gi|229486248|sp|B1JEP3|MURI_PSEPW RecName: Full=Glutamate racemase gi|169761617|gb|ACA74933.1| glutamate racemase [Pseudomonas putida W619] Length = 265 Score = 304 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + DSG+GGL VL +++ L+P +YVAD PYG +++R + Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPSESLLYVADCGHVPYGEKTPDYIRQRCRRIAEFFQ 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNTA +LR +P +G PA+K AAA T+SG++ +L+T TL Sbjct: 65 AQGAKAM-VLACNTATVAAVADLRERYPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E G ++++ + G Sbjct: 124 QSAKFAALLDRFANDVRVVTQPCPGLVELIETGDLG----SLQLRQLLLGYVQPLLAAGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + + P V +D ++AR+ + LL D A + Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPADVAIIDTGAAVARQLKRLLAARELLADGPARDAAFWS 239 Query: 253 SGKPDIAMRRL 263 S P L Sbjct: 240 SADPRSLENIL 250 >gi|330685733|gb|EGG97369.1| glutamate racemase [Staphylococcus epidermidis VCU121] Length = 265 Score = 304 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 100/262 (38%), Gaps = 7/262 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + Sbjct: 1 MNRPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRSGEEVKQFTTEIAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ P + +G + P + A T++ + IL T Sbjct: 61 VE-FDIKMLVIACNTATAVALEHLQKILP-IPVIGVIEPGARTAIMTTKNQNVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I ++ ++ VE+ + I + Sbjct: 119 TIKSEAYRKHIKRINPNVEVYGIACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D ++L CTHYPL+ + + AR LL N H + H Sbjct: 176 EADTVILGCTHYPLLYKPINDYFGGKKTVISSGLETAREVSALLTFSNEHASYTQHPPHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271 F +G + + G+ + Sbjct: 236 FFATGDTMHIENIIKEWLGMDT 257 >gi|25028959|ref|NP_739013.1| glutamate racemase [Corynebacterium efficiens YS-314] gi|23494246|dbj|BAC19213.1| glutamate racemase [Corynebacterium efficiens YS-314] Length = 316 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 10/270 (3%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 + P I IFDSG+GGL V + + +P IY+ D PYG ++ Sbjct: 43 SMIERPIP-GADAPIGIFDSGVGGLTVARTIIDQLPHESIIYIGDTANGPYGPLPIARVR 101 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 + + + +++++ + VIACNTA + R + +PA+++A A T++G Sbjct: 102 EHALRIADELVERG-CKMIVIACNTASAAFLRDARERYDVPVVEVILPAVRRAVAATRNG 160 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ T T+ +L + +H + VE + +I E Sbjct: 161 KVGVIGTVGTINSGAYQDLFAA-SPSIEVHAAACPRFVDFVERGITSGR----QILNIAE 215 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 G + + D +VL CTHYPL+ V + V + +++ A+ +L + + Sbjct: 216 GYLEPLQAQGVDTLVLGCTHYPLLSGVIQLAMGDHVTLVSSAEETAKDVLRILSQNDLLA 275 Query: 242 T---RVFDDHALFLSGKPDIAMRRLMQGFG 268 ++ +G P++ + + G Sbjct: 276 DPTMHPTPTYSFESTGDPELFSQLSRRFLG 305 >gi|49475603|ref|YP_033644.1| glutamate racemase [Bartonella henselae str. Houston-1] gi|81647897|sp|Q6G3D5|MURI_BARHE RecName: Full=Glutamate racemase gi|49238410|emb|CAF27637.1| Glutamate racemase [Bartonella henselae str. Houston-1] Length = 270 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 133/259 (51%), Positives = 181/259 (69%), Gaps = 1/259 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL VL+++R L+PE FIYVADDVGFPYGNWE++ LK R++ +F+++L Sbjct: 3 ERPVLFFDSGIGGLTVLREVRSLIPEKQFIYVADDVGFPYGNWEENVLKNRILKIFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y P L VIACNT TL+ +LR FP + F+G VPAIK AA T+SG IS+L+TP T+ Sbjct: 63 TVYNPALCVIACNTVSTLMIADLRERFPHILFVGTVPAIKLAAEQTKSGFISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +RTYT LI+S+ QCH+ LV S LA E Y G + +E++ EI CF++K GK T Sbjct: 123 KRTYTHELINSFAGQCHVQLVGSEKLAGFAENYLRGQSVDLEELRNEILPCFVKKNGKHT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251 D+IVLACTHYP ++H FR+ + W V W+D S +IA+R R LLP+ HQT + ++D ALF Sbjct: 183 DIIVLACTHYPFLLHFFREQALWHVQWIDPSKAIAKRTRSLLPQRIHHQTVKKYEDFALF 242 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S + +RL++ F L Sbjct: 243 TSQNITSSTKRLLKEFSLN 261 >gi|323126640|gb|ADX23937.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 264 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K + V ACNTA + +E++ + LG + P A T G Sbjct: 53 YTWDLVRFLLTK-NVKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE +I+ KK + Sbjct: 111 QVGVIGTPMTIASDIYRQKIQLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V +D+ R LL + Sbjct: 167 ESLTPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEING 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267 +R + H + + P+I Sbjct: 226 SRCQEKVKHHFYTTASPEIFQEIASVWL 253 >gi|16767395|ref|NP_463010.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|207859320|ref|YP_002245971.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|17865743|sp|P40723|MURI_SALTY RecName: Full=Glutamate racemase gi|226707589|sp|B5QXR2|MURI_SALEP RecName: Full=Glutamate racemase gi|16422698|gb|AAL22969.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|206711123|emb|CAR35497.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|267996437|gb|ACY91322.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160637|emb|CBW20168.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|320088535|emb|CBY98294.1| Glutamate racemase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|323132476|gb|ADX19906.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326625851|gb|EGE32196.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332990959|gb|AEF09942.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 283 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 8/276 (2%) Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56 ++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64 Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA Sbjct: 65 ETFIVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+ Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 184 RRILRPWLRMPEP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEH 241 Query: 237 INTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P + ++Q +G ++ Sbjct: 242 EAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 277 >gi|304403816|ref|ZP_07385478.1| glutamate racemase [Paenibacillus curdlanolyticus YK9] gi|304346794|gb|EFM12626.1| glutamate racemase [Paenibacillus curdlanolyticus YK9] Length = 269 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q I I DSG+GGL V +++ +P +Y D PYG + + + + Sbjct: 1 MQQPIAILDSGVGGLTVAKEVMRQLPREKIVYFGDTARTPYGPRPAGEVVRFTKEIVDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + +Y P + V+ACNTA D+L+ S+ +G + P + A + T +G+I ++ T Sbjct: 61 I-QYNPKMIVVACNTATAFALDDLKEMV-SVPVVGVIDPGARAALSRTNTGVIGVIGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R + + H+ + VE+ +++ + G E Sbjct: 119 TVRSGAYEHALKQLSPHIHVISQACPAFVPLVEQGNFRSTETFHTVQQAL-GYLREY--- 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 D ++L CTHYP + ++ V + +++ R R +L + H Sbjct: 175 PLDCMILGCTHYPFLSESISEVMGPEVALISSAEETVREIRAILEGQGKLVSIEAEPMHR 234 Query: 250 LFLSGKPDIAMRRLMQGFG 268 F SG+ + + Q G Sbjct: 235 FFCSGEQQMFKQIATQWLG 253 >gi|331092253|ref|ZP_08341081.1| glutamate racemase [Lachnospiraceae bacterium 2_1_46FAA] gi|330401685|gb|EGG81264.1| glutamate racemase [Lachnospiraceae bacterium 2_1_46FAA] Length = 276 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 16/261 (6%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ID + I +FDSG+GGL V++++ +P + +Y D PYG+ + Sbjct: 1 MSID-----CRKDAPIGVFDSGVGGLTVVKEIMQNLPNENLVYFGDTARVPYGSKSVDTI 55 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + + K VIACNT L D LR + +G V P K AA T+ Sbjct: 56 IRFSKQIVRFLQTKK-VKAIVIACNTVSALALDILRQE-TDIPIIGVVKPGSKVAAEVTE 113 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + + I+ T AT++ + I Y + + + VEE +I ++ Sbjct: 114 NKRVGIIGTEATVKSGVYTKFIQQYKPDIEVLAKACPLFVPLVEEGFVDNRIA----REA 169 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 I+ E + D ++L CTHYPL+ + + ++ + A + LL N Sbjct: 170 IDYYLHEMKQSGIDTLILGCTHYPLLYNPIMAYMGEGIRLVNPAYETALELKQLLEEKNL 229 Query: 240 HQ----TRVFDDHALFLSGKP 256 + + S P Sbjct: 230 ENVSQEAGKVPTYEFYSSDAP 250 >gi|291550542|emb|CBL26804.1| glutamate racemase [Ruminococcus torques L2-14] Length = 273 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 8/257 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + K I +FDSG+GGL V +++ +P + +Y D PYG+ + + + + Sbjct: 1 MKNKKMAPIGVFDSGVGGLTVAREISRQLPYENIVYFGDTARVPYGSKSQNTIIRFSEQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + K Q VIACNTA L D ++ F +P + A T +G + ++ Sbjct: 61 IRFLRTK-QVKAIVIACNTASALALDAVKDEFDLPIIGVVIPGARAAVEATTNGKVGVVG 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++ + +I + + + + VEE + ++ IE Sbjct: 120 TEATVQSGMYTKVIQGMNPKIEVIEKACPLFVPLVEEGFKEHIVT----REIIEYYLESM 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D ++L CTHYPL+ R+ + ++ + A + LL + Sbjct: 176 RNTDIDAMILGCTHYPLLRSKIREYMGDKIQIVNPAYETAMDLKRLLEEEEMANDETTEH 235 Query: 248 H---ALFLSGKPDIAMR 261 H + ++S + + Sbjct: 236 HSEYSFYVSDAAEKFRK 252 >gi|56415968|ref|YP_153043.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62182590|ref|YP_219007.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161486778|ref|NP_807142.2| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161501913|ref|NP_457929.2| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|197364895|ref|YP_002144532.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|22001825|sp|Q8Z315|MURI_SALTI RecName: Full=Glutamate racemase gi|75479264|sp|Q57H86|MURI_SALCH RecName: Full=Glutamate racemase gi|81599685|sp|Q5PK79|MURI_SALPA RecName: Full=Glutamate racemase gi|229486290|sp|B5BJP1|MURI_SALPK RecName: Full=Glutamate racemase gi|56130225|gb|AAV79731.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62130223|gb|AAX67926.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197096372|emb|CAR61977.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|322717091|gb|EFZ08662.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 283 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 8/276 (2%) Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56 ++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64 Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA Sbjct: 65 ETFIVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+ Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 184 RRILRPWLRMPEP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEH 241 Query: 237 INTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P + ++Q +G ++ Sbjct: 242 EAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 277 >gi|307128966|ref|YP_003880982.1| glutamate racemase [Dickeya dadantii 3937] gi|306526495|gb|ADM96425.1| glutamate racemase [Dickeya dadantii 3937] Length = 290 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 146/261 (55%), Gaps = 4/261 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ + + Sbjct: 22 ARPTVLVFDSGVGGLSVYDEVRKLLPDLHYIYTFDNEAFPYGEKPEQFIIERVVSIVDAV 81 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ L +IACNTA T+ LR+ F + +G VPA+K AA T++G++ +L+T AT Sbjct: 82 EKQHPLSLVIIACNTASTISLPALRARF-NFPVVGVVPAVKPAAKLTRNGVVGLLATRAT 140 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + + C I L+ S L E G + E+ ++K ++ K + Sbjct: 141 VQRPYTHELISRFANDCQILLLGSAELVEWGEAKLQGETVPEEVLRKILKPWL--KLPEP 198 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PL+ +Q+ P +D+ +IARR L+ ++ + + A Sbjct: 199 PDTVVLGCTHFPLLSEELQQVLPDGTRLVDSGTAIARRTAWLIEHLDNPKLSTERNLAYC 258 Query: 252 LSGKPDI-AMRRLMQGFGLKS 271 LS P + A+ +++ +G + Sbjct: 259 LSITPKVAALSPVLRRYGFSA 279 >gi|55820352|ref|YP_138794.1| glutamate racemase [Streptococcus thermophilus LMG 18311] gi|81561031|sp|Q5M627|MURI_STRT2 RecName: Full=Glutamate racemase gi|55736337|gb|AAV59979.1| glutamate racemase [Streptococcus thermophilus LMG 18311] Length = 271 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 18/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V+++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPYESIVYIGDSARAPYGPRPAGQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +L K + VIACNTA ++ +E++ + + LG V P A ++SG Sbjct: 53 YTWQLVKFLLTK-DVKMIVIACNTATAVVWEEIKESL-DIPVLGVVLPGSSAAIKSSRSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ TP T+ I Q ++ +S A VE +I KK + Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYPL+ + + + V +D+ R LL ++ Sbjct: 167 ESMAPLVD-RVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225 Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268 +R D + + Q G Sbjct: 226 SREVKDKTEEYYTTASVLGFKEIAEQWLG 254 >gi|270265151|ref|ZP_06193413.1| glutamate racemase [Serratia odorifera 4Rx13] gi|270040785|gb|EFA13887.1| glutamate racemase [Serratia odorifera 4Rx13] Length = 260 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 89/256 (34%), Positives = 140/256 (54%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S + ++ Sbjct: 2 LVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIVSAVQQRHP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 + VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++RTY Sbjct: 62 LAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAARLTANGVVGLLATRGTVQRTY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + + C I L+ S L E G + +KK + +E D +V Sbjct: 121 THELIARFATDCKIELLGSSELVELAEAKLHGEAVPLATLKKILHPWLSMREP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR L+ + D+ A ++ Sbjct: 179 LGCTHFPLLAEELMQVLPEGTRLVDSGAAIARRTAWLISSQENLVSTQEDNLAYCMALNE 238 Query: 257 DI-AMRRLMQGFGLKS 271 D A+ ++QG+G KS Sbjct: 239 DTDALLPVLQGYGFKS 254 >gi|205354293|ref|YP_002228094.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|226707590|sp|B5REZ1|MURI_SALG2 RecName: Full=Glutamate racemase gi|205274074|emb|CAR39081.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629417|gb|EGE35760.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 283 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 8/276 (2%) Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56 ++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64 Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA Sbjct: 65 ETFIVERVVEIATAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+ Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 184 RRILRPWLRMPEP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEH 241 Query: 237 INTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P + ++Q +G ++ Sbjct: 242 EAPDAKSTDANIAYCMAMTPGAEQLLPILQRYGFET 277 >gi|70726812|ref|YP_253726.1| glutamate racemase [Staphylococcus haemolyticus JCSC1435] gi|123659934|sp|Q4L5F5|MURI_STAHJ RecName: Full=Glutamate racemase gi|68447536|dbj|BAE05120.1| Glutamate racemase [Staphylococcus haemolyticus JCSC1435] Length = 266 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 102/258 (39%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ L + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGDEVKQFTTQLANKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + ++ + VIACNTA + + L+ P + +G + P + A T++ + IL T Sbjct: 61 M-QFDIKMLVIACNTATAVALEHLQQMLP-IPVIGVIEPGSRTAIMTTKNQNVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I H++ V+ VE+ + I + Sbjct: 119 TIKSEAYRHHIKHINPNVHVYGVACPGFVPLVEQMRYDDPTITSIV---IHQTLKQWRNT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D I+L CTHYPL+ + + AR LL N H + +H Sbjct: 176 DADTIILGCTHYPLLYKPINDYFGGEKKVISSGLETAREVSALLTFSNEHASYTQHPEHR 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G ++Q Sbjct: 236 FFATGDTVHIKNIILQWL 253 >gi|290579929|ref|YP_003484321.1| putative glutamate racemase [Streptococcus mutans NN2025] gi|254996828|dbj|BAH87429.1| putative glutamate racemase [Streptococcus mutans NN2025] Length = 264 Score = 303 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 18/270 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P IY+ D PYG +K Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKT 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L K + V ACNTA ++ +E++ + LG + P A T SG Sbjct: 53 YTWELVNFLLTKK-VKMIVFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I I+ TP T++ I Q + ++ VE + KK + Sbjct: 111 QIGIIGTPMTIKSNIYEQKILDLSPQMKVRSLACPKFVPIVESNKMNSSVA----KKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPL+ + + + V+ +D+ R LL + ++ Sbjct: 167 ESLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPDVELIDSGAECVRDISVLLNYFDLNR 225 Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGL 269 +R H + + L Sbjct: 226 SRTSKVLHHRFYTTASVASFKEIASDWLPL 255 >gi|25011689|ref|NP_736084.1| glutamate racemase [Streptococcus agalactiae NEM316] gi|77407235|ref|ZP_00784198.1| glutamate racemase [Streptococcus agalactiae H36B] gi|77414377|ref|ZP_00790532.1| glutamate racemase [Streptococcus agalactiae 515] gi|29839529|sp|Q8E3V7|MURI_STRA3 RecName: Full=Glutamate racemase gi|24413229|emb|CAD47308.1| Unknown [Streptococcus agalactiae NEM316] gi|77159567|gb|EAO70723.1| glutamate racemase [Streptococcus agalactiae 515] gi|77174157|gb|EAO77063.1| glutamate racemase [Streptococcus agalactiae H36B] Length = 264 Score = 303 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D+ P I DSG+GGL V+++M +PE I++ D PYG +++ Sbjct: 1 MDSRP--------IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K + VIACNTA + E++ + LG + P A T SG Sbjct: 53 FTWQMVNFLLTK-NVKMIVIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + I+ TP T++ I + + ++ VE ++ KK + Sbjct: 111 KVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D ++L CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 ETLSPLVGK-LDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINH 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + H + + P Q Sbjct: 226 NWQNKHGGHHFYTTASPKGFKEIAEQWL 253 >gi|325294218|ref|YP_004280732.1| Glutamate racemase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064666|gb|ADY72673.1| Glutamate racemase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 263 Score = 303 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 10/253 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GGL VL+ +R +P IY D PYG + + + + +L Sbjct: 3 ERPIGIFDSGVGGLTVLRALRKKLPSEDLIYFGDTARVPYGTKSPKTIIRYSIEN-TKLL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + ++ACNT+ + + L+S F + LG + P + A + T+SG + ++ T AT Sbjct: 62 KRFNVKMVIVACNTSSSYALEILKSEFSDVPILGVINPGARLAVSATKSGKVGVIGTEAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ IH C + + +EE + + ++ + + GK Sbjct: 122 IKSGAYRKAIHFINPSCLVFEKVCPLFVPLIEEGWLNDPVTLEVARRYV----LPLLGKG 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHYPLI + ++ V +D++ +IA LP + + + + Sbjct: 178 IDTLVLGCTHYPLIKDILLKIC-KNVTLIDSAQAIADEVAKALP---SKKESGKGNVKIL 233 Query: 252 LSGKPDIAMRRLM 264 +S K D + Sbjct: 234 VSDKTDRFEKIAK 246 >gi|224823853|ref|ZP_03696962.1| glutamate racemase [Lutiella nitroferrum 2002] gi|224604308|gb|EEG10482.1| glutamate racemase [Lutiella nitroferrum 2002] Length = 270 Score = 303 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 114/263 (43%), Gaps = 7/263 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K + I +FDSG+GGL V++ + +P IY D PYG ++ + Sbjct: 1 MTAKARRPIGVFDSGVGGLTVVRALMDRLPFEDIIYFGDTARVPYGVKSVATIRAFSRQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISIL 126 +L +++ V+ACNT + +++R + +G + A QAA +++ I ++ Sbjct: 61 VEFLL-QHEVKALVVACNTISAVALEQVRELAGDIPVIGVIEAGAQAAVKVSKNHEIGVI 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ + IH + ++ + + VEE + ++ ++ E Sbjct: 120 ATSTTINSNAYAREIHRLMPDARVYSQACPLFVPLVEEGWVDHPVTRLTAEEYLKTVLEE 179 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVF 245 D +VL CTHYPLI + +++ V+ +D++ + A +L +N R Sbjct: 180 ----HVDTLVLGCTHYPLIKPLLTEVTGGRVELVDSALTTAEATAEVLAGLNLLNPQRGA 235 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 ++ +++ P + G Sbjct: 236 PEYRYYVTDIPLKFQTIGERFLG 258 >gi|146306097|ref|YP_001186562.1| glutamate racemase [Pseudomonas mendocina ymp] gi|167017319|sp|A4XR64|MURI_PSEMY RecName: Full=Glutamate racemase gi|145574298|gb|ABP83830.1| glutamate racemase [Pseudomonas mendocina ymp] Length = 263 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 5/256 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q + +FDSG+GGL VL+++R L+P +YVAD PYG +++R + + +L Sbjct: 5 QAPVGVFDSGVGGLSVLREIRQLLPNESLLYVADSGHVPYGEKSAEYIRERCVLITEHLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA ELR +P + +G PA+K AAA T+SG++ +L+T TL Sbjct: 65 AQGAKAL-VLACNTATAAAAAELRERYPQLPIVGMEPAVKPAAAATRSGVVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L +E A + ++ +E E Sbjct: 124 KSAKFAALLDRFASDVRVITQPCPGLVECIEAGALQAPATRELLQGYVEPLLAE----GC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + L P V +D ++AR+ + LL + T+ + Sbjct: 180 DTLILGCTHYPFLKPLLHSLVPDSVSLIDTGAAVARQLQRLLGQHELLATQPAQATRYWS 239 Query: 253 SGKPDIAMRRLMQGFG 268 SG L G Sbjct: 240 SGDIQRMQAVLPLLLG 255 >gi|134299103|ref|YP_001112599.1| glutamate racemase [Desulfotomaculum reducens MI-1] gi|134051803|gb|ABO49774.1| glutamate racemase [Desulfotomaculum reducens MI-1] Length = 282 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 7/244 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL V + +R L+P IY AD PYG+ + +++R + L Sbjct: 18 RAPIGVFDSGVGGLSVARDIRKLLPLEDIIYYADSAYCPYGDKDPQTIRQR-EKAIGEFL 76 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 L V+ACNTA + + LR F + +G P +K A A T++G I +L+T T+ Sbjct: 77 VSQGCKLIVVACNTASSAGLEYLR-RFLKVPVVGMEPGVKPAVAATRNGKIGVLATCVTI 135 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 S+L+ Y + + L +E E++++ ++ K+ Sbjct: 136 AGDRFSSLVKRYAEETEVITQPCPGLVELIESGKLNAPETEEKLRTFLQPIL----DKKA 191 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251 D IVL CTHYP + + L+ V +D ++A++ +L N + + Sbjct: 192 DTIVLGCTHYPFLRPMLESLAGPGVSVIDTGQAVAKQVSRVLSACNLAKNSGPLGTEQFY 251 Query: 252 LSGK 255 SG Sbjct: 252 TSGN 255 >gi|332710932|ref|ZP_08430868.1| glutamate racemase [Lyngbya majuscula 3L] gi|332350246|gb|EGJ29850.1| glutamate racemase [Lyngbya majuscula 3L] Length = 298 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 7/260 (2%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + + I IFDSG+GGL VL+++ +P IY AD PYG + + + S Sbjct: 12 QPQSSPIGIFDSGVGGLTVLRELYKQLPSESIIYFADTARLPYGTRSTDEIVQFGFEILS 71 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++ + + V+ACNT+ L + LRS F + LG + +AA Q I +++TP Sbjct: 72 WMV-QQDVKMVVMACNTSSALALETLRSEF-DIPMLGLILPGARAA-LHQGRRIGVIATP 128 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT N I + V VE+ ++ +E Sbjct: 129 ATAASNAYRNAILEVEPTAQVWQVGCPEFVPLVEQNRLCEPYTTAVARQYLEPLLA---- 184 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 + D +V CTHYP + + R++ P V +D + + A L I T Sbjct: 185 AQIDTLVYGCTHYPHLEPILREILPPDVKLVDPAKYVVAAAAQELDLIGGKNTGEARPTR 244 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 +SG P ++ +Q G Sbjct: 245 FGVSGCPQQFAQQSLQWLGY 264 >gi|312792765|ref|YP_004025688.1| glutamate racemase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179905|gb|ADQ40075.1| glutamate racemase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 267 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 6/242 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K + V+ACNTA + L++ F P + A T++ I ++ T T+ Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKRIGVIGTEGTIA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I S + + VEE ++ K+ +E E K D Sbjct: 123 SGAFEKKILELDSSLQVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFNEKEID 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + V +++ P V ++ + A++ LL + + + F + Sbjct: 179 TLVLGCTHYPFLQDVIKKVLP-DVMLINPALETAKQVFELLKENDMLNSSSEEPTYYFYA 237 Query: 254 GK 255 Sbjct: 238 SD 239 >gi|290477203|ref|YP_003470120.1| glutamate racemase [Xenorhabdus bovienii SS-2004] gi|289176553|emb|CBJ83362.1| glutamate racemase [Xenorhabdus bovienii SS-2004] Length = 287 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 139/262 (53%), Gaps = 4/262 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + +ILIFDSG+GGL V Q++R L+PE H+IY D+ FPYG + +R++ + Sbjct: 21 PKTARPTILIFDSGVGGLSVYQEIRQLLPELHYIYAFDNEAFPYGEKTAEVIIERVVQVV 80 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +I ++ + +IACNTA T+ LR F S +G VPAIK AA T + +I +L+T Sbjct: 81 DEIQKRHPLAIVIIACNTASTVSLPALRERF-SFPVVGVVPAIKPAAKLTCNRVIGLLAT 139 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ R YT LI + + C +H + S L E G KI + ++K ++ KE Sbjct: 140 RATVNRDYTKELIARFATDCQVHSIGSAELVELAERKLHGEKIPLEILEKILKPWLRMKE 199 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D ++L CTH+PLI Q+ P +D+ +IARR L+ N+ D+ Sbjct: 200 P--PDTVILGCTHFPLIAEELSQVFPDGTRLIDSGAAIARRTVWLVKNQNSLFLTTADNL 257 Query: 249 ALFLSGK-PDIAMRRLMQGFGL 269 A A+R +++ +G Sbjct: 258 AYCTKIDLNSEALRPVLRDYGF 279 >gi|158429235|pdb|2OHO|A Chain A, Structural Basis For Glutamate Racemase Inhibitor gi|158429236|pdb|2OHO|B Chain B, Structural Basis For Glutamate Racemase Inhibitor Length = 273 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+ Sbjct: 10 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 61 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + + V ACNTA + +E+++ + LG V P A T G Sbjct: 62 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 119 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE ++ KK + Sbjct: 120 QVGVIGTPMTVASDIYRKKIQLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVY 175 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 176 DSLAPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 234 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + +H F + P+I Sbjct: 235 NYHQKAVEHRFFTTANPEIFQEIASIWL 262 >gi|312621720|ref|YP_004023333.1| glutamate racemase [Caldicellulosiruptor kronotskyensis 2002] gi|312202187|gb|ADQ45514.1| glutamate racemase [Caldicellulosiruptor kronotskyensis 2002] Length = 267 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 6/242 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K + V+ACNTA + L++ F P + A T++ I ++ T T+ Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDVPIVAVIEPGAEAAVKATKNKRIGVIGTEGTIS 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + + + VEE ++ K+ +E E K D Sbjct: 123 SGAFEKKILELDNSIKVFSKPCPLFVPLVEEGWTDKEVTYLIAKEYLE----EFNEKAID 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + V R++ P V ++ + A++ LL + + F + Sbjct: 179 TLVLGCTHYPFLQDVIRKVLP-NVMLINPALETAKQVFELLKMNDMLNNSSEEPTYYFYA 237 Query: 254 GK 255 Sbjct: 238 SD 239 >gi|229822946|ref|ZP_04449016.1| hypothetical protein GCWU000282_00238 [Catonella morbi ATCC 51271] gi|229787759|gb|EEP23873.1| hypothetical protein GCWU000282_00238 [Catonella morbi ATCC 51271] Length = 286 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 97/259 (37%), Gaps = 12/259 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I DSG GGL V+++ +P IY+ D+ PYG +K + L +L K Sbjct: 8 PIGFIDSGYGGLTVVKQSLKQLPNESIIYLGDNARCPYGPRSMEEVKDYIWQLTRFLLKK 67 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + VIACNT +E+R T + +G + P + A T++ I ++ T T+ Sbjct: 68 G-IKMLVIACNTGTAAALEEIRQTL-DIPVVGVIHPGSRAAIERTENNHIGVIGTQGTIA 125 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 ++ + V+ VE++ + ++++ + D Sbjct: 126 SNLYERVMKDKADYLQVTSVACPSFVQLVEDHQLNSPLAWQQVRE----SLSAFDQTGID 181 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-----FDDH 248 +V+ CTHYP + + + + V +D+ LL ++ Sbjct: 182 TLVMGCTHYPHLKPLIQAVMGQGVTLIDSGVETLNEVSMLLDYFGLSRSAKDAQIQPPSQ 241 Query: 249 ALFLSGKPDIAMRRLMQGF 267 + +G + + Sbjct: 242 HFYTTGDAKQFAQFVTAWL 260 >gi|37528551|ref|NP_931896.1| glutamate racemase [Photorhabdus luminescens subsp. laumondii TTO1] gi|81572235|sp|Q7MYE4|MURI_PHOLL RecName: Full=Glutamate racemase gi|36787989|emb|CAE17106.1| glutamate racemase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 287 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 90/263 (34%), Positives = 141/263 (53%), Gaps = 4/263 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + ++L+FDSG+GGL + Q++R L+P+ H+IYV D+ FPYG + + +R++ + Sbjct: 21 NKAARPTVLVFDSGVGGLSIYQEIRQLLPDLHYIYVFDNEAFPYGEKSEEFIVERVVQIV 80 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I K+ + VIACNTA T+ LR F S +G VPAIK AA T++G++ +L+T Sbjct: 81 GAIQQKHPLTIVVIACNTASTVSLPALRERF-SFPVVGVVPAIKPAAKLTRNGVVGLLAT 139 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ R+YT LI + + C I + S L E G K+ D +KK ++ K+ Sbjct: 140 RATVNRSYTKELIEKFATGCRIESIGSAELVELAEIKLHGGKVSPDILKKILKPWLGMKK 199 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D +VL CTH+PL+ Q+ P +D+ +IARR L+ N D Sbjct: 200 P--PDTVVLGCTHFPLLAEELVQILPDGTRLIDSGVAIARRTAWLVKHQNNLVCTSADSL 257 Query: 249 ALFLSGKPDI-AMRRLMQGFGLK 270 A + D A+ ++Q +G Sbjct: 258 AYCMKVNTDTDALIPVLQEYGFS 280 >gi|115373706|ref|ZP_01461000.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1] gi|310823643|ref|YP_003956001.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1] gi|115369253|gb|EAU68194.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1] gi|309396715|gb|ADO74174.1| Glutamate racemase [Stigmatella aurantiaca DW4/3-1] Length = 270 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 111/263 (42%), Gaps = 8/263 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + I +FDSG+GGL VL+ + +P + +Y+ D PYG + + + Sbjct: 1 MRQGSHSPIGVFDSGVGGLTVLKALMERLPHENTLYLGDTARVPYGTKSGEVVTRYSLKN 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 +L+K L V+ACNTA + L + S+ LG + P + A T+ G + ++ Sbjct: 61 AQFLLEKG-IKLLVVACNTASAVALPALSAAL-SVPVLGVIAPGAQAALRRTRGGGVGVI 118 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 TP T+R + + + + + + EE ++ ++ + Sbjct: 119 GTPGTIRSGAYQRELQAADPKVQVKARACPLFVPLAEEGWTQGEVPALVARE----YLAD 174 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-INTHQTRVF 245 + D +VL CTHYPL+ + Q+ V +D++++ A LL + Sbjct: 175 FAREGVDTLVLGCTHYPLLKDIIAQVVGPRVSLVDSAEATAEAVALLLEQTQGLAPPGGV 234 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 H F++ P+ M + G Sbjct: 235 PVHGYFVTDVPERFMEVGARFLG 257 >gi|228476279|ref|ZP_04060981.1| glutamate racemase [Staphylococcus hominis SK119] gi|314936670|ref|ZP_07844017.1| glutamate racemase [Staphylococcus hominis subsp. hominis C80] gi|228269682|gb|EEK11184.1| glutamate racemase [Staphylococcus hominis SK119] gi|313655289|gb|EFS19034.1| glutamate racemase [Staphylococcus hominis subsp. hominis C80] Length = 265 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 97/258 (37%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K L + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKTFTTQLANKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ P + +G + P + A T++ + IL T Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQQLLP-IPVIGVIEPGARTAIMTTKNQKVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I ++ V+ VE+ + I Sbjct: 119 TIKSEAYRHHIKRINPNVEVYGVACPGFVPLVEQMRYDDPTITSIV---IHQTLKHWRNT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D ++L CTHYPL+ + + AR LL N H + H Sbjct: 176 DADTVILGCTHYPLLYKPINDYFGGNKKVISSGLETAREVSALLTFSNEHASYTQHPKHR 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G + Q Sbjct: 236 FFATGDTVHIKHIISQWL 253 >gi|307945604|ref|ZP_07660940.1| glutamate racemase [Roseibium sp. TrichSKD4] gi|307771477|gb|EFO30702.1| glutamate racemase [Roseibium sp. TrichSKD4] Length = 267 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 132/258 (51%), Positives = 181/258 (70%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + ILIFDSGIGGL VL+++R L+P +YVADD GFP G+WE+ LK+RL+ LF +L Sbjct: 4 RQPILIFDSGIGGLTVLRELRLLLPYETILYVADDAGFPLGDWEEPPLKERLLQLFDGLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++QP SVIACNTAFTL + LR+ P AF+G VPAIK AA T SGL+S+L+TP T+ Sbjct: 64 VRFQPKASVIACNTAFTLAGEALRAAQPDHAFVGTVPAIKPAAERTASGLVSVLATPGTV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 RR YT NLI S+ +QCH+ LV S LA+ E+ G + ++ +K EI+ CF+EK+G+RT Sbjct: 124 RRAYTKNLIDSFATQCHVRLVGSDALAAHAEQELRGEPVSDEALKAEIDACFLEKDGRRT 183 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D++VLACTHYP + + FR+L+PWPVDWLD + +IAR+ +L + D A F Sbjct: 184 DIVVLACTHYPFLANRFRKLAPWPVDWLDPAGAIARQVVRVLGDDLYLEPVSVPDTAHFT 243 Query: 253 SGKPDIAMRRLMQGFGLK 270 SG+ +++RL+ GFGL Sbjct: 244 SGQSTASLKRLLAGFGLS 261 >gi|253991699|ref|YP_003043055.1| glutamate racemase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783149|emb|CAQ86314.1| glutamate racemase [Photorhabdus asymbiotica] Length = 268 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 141/264 (53%), Gaps = 4/264 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K ++ ++L+FDSG+GGL V Q++R L+P+ H+IYV D+ FPYG + + +R++ + Sbjct: 1 MNKTVRPTVLVFDSGVGGLSVYQEIRQLLPDLHYIYVFDNEAFPYGEKSEEFIIERVVEI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 S + K+ + VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+ Sbjct: 61 VSAVQQKHPLAIVVIACNTASTVSLPALRERF-HFSVVGVVPAIKPAAKLTCNGIVGLLA 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ R+YT LI + + C I + S L E G K+ + +K+ ++ K Sbjct: 120 TRATVNRSYTKELIERFAADCRIESIGSAELVELAEAKLHGNKVSSEALKQILKPWLKMK 179 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D +VL CTH+PL+ Q+ P +D+ +IARR L+ D Sbjct: 180 EP--PDTVVLGCTHFPLLAEELIQVLPDGTRLIDSGAAIARRTAWLVKHQENLVCTSIDS 237 Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270 A + D A+ ++Q +G Sbjct: 238 LAYCMKMNVDTDALIPVLQAYGFS 261 >gi|197303990|ref|ZP_03169022.1| hypothetical protein RUMLAC_02727 [Ruminococcus lactaris ATCC 29176] gi|197296958|gb|EDY31526.1| hypothetical protein RUMLAC_02727 [Ruminococcus lactaris ATCC 29176] Length = 273 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 8/257 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K + +FDSG+GGL V +++ +P+ + +Y D PYG+ + + + + Sbjct: 1 MMNKKTAPVGVFDSGVGGLTVAREISRQLPDENIVYFGDTARVPYGSKSQNTIIRFSEQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 L + VIACNTA L D ++ F +P + A T++ + ++ Sbjct: 61 I-RFLKTKEVKAIVIACNTASALALDAVKDEFDIPILGVVIPGARAAVEATKNRKVGVVG 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++ + +I + + + + VEE ++ E+ IE Sbjct: 120 TEATVQSGMYTKVIQGMNPEITVIEKACPLFVPLVEEGFKEHQVTEE----VIEYYLESM 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D ++L CTHYPL+ R + ++ + A +CLL + Sbjct: 176 RSTDIDAMILGCTHYPLLRSKIRAYMGDKIQIVNPAYETAMDLKCLLEENDMANDGTEGQ 235 Query: 248 H---ALFLSGKPDIAMR 261 H + ++S + + Sbjct: 236 HSNYSFYVSDAAEKFRK 252 >gi|89095339|ref|ZP_01168257.1| glutamate racemase [Oceanospirillum sp. MED92] gi|89080414|gb|EAR59668.1| glutamate racemase [Oceanospirillum sp. MED92] Length = 276 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 113/256 (44%), Gaps = 3/256 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL VL ++ L+P IY+ D PYG ++ + + ++ Sbjct: 4 NLPIGVFDSGVGGLTVLNAIKDLLPNEDLIYLGDTARVPYGTKSSASVIRYAEQAAAALI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + L VIACNTA + D L+ P +A +G + P + A TQ+ I +++T T Sbjct: 64 CR-EVKLLVIACNTASAVAVDHLQKLNPEIAVVGVIEPGADASCAATQNNHIGVIATEGT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + I + + + + EE ++ E +K+ + Sbjct: 123 VNNQAYQSAILKRNPNASVVAQACSLFVALAEEGWHEGELVESIVKECLRPLLESDYQTN 182 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+P++ R + V+ +D++++ A+ + L + + Sbjct: 183 MDTLVLGCTHFPVLKESIRNIVGDNVELVDSAETTAKVVKHYLTEKELLNGQDDGRVSFL 242 Query: 252 LSGKPDIAMRRLMQGF 267 ++ P + R+ + F Sbjct: 243 VTDDP-VRFSRVARNF 257 >gi|225571415|ref|ZP_03780411.1| hypothetical protein CLOHYLEM_07513 [Clostridium hylemonae DSM 15053] gi|225159891|gb|EEG72510.1| hypothetical protein CLOHYLEM_07513 [Clostridium hylemonae DSM 15053] Length = 273 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 8/254 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K I +FDSG+GGL V +++ +P+ + +Y D PYG+ + + + + Sbjct: 3 SNKDRTAPIGVFDSGVGGLTVAREIMRQLPDENIVYFGDTARVPYGSKSRNNIIRFSRQI 62 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 L+ VIACNTA L D ++ + +G + P + A T+S I ++ Sbjct: 63 I-RFLETKGVKAIVIACNTASALALDVVKEE-SGIPIIGVIVPGARAAVKETKSKKIGVV 120 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT++ S +I + + + VEE + ++ IE E Sbjct: 121 GTEATIQSHTYSKVITDMEPEASVIGKPCPLFVPLVEEGFAKHHVTDE----IIEYYLDE 176 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVF 245 + D ++L CTHYPL+ + V+ ++ + A + LL + + + Sbjct: 177 MKHSDIDTMILGCTHYPLLRSRIMEYFGENVNIVNPAYETAMDLKALLAEHDMENNSGSL 236 Query: 246 DDHALFLSGKPDIA 259 + ++S + Sbjct: 237 ARYEFYVSDTAEKF 250 >gi|222530006|ref|YP_002573888.1| glutamate racemase [Caldicellulosiruptor bescii DSM 6725] gi|222456853|gb|ACM61115.1| glutamate racemase [Caldicellulosiruptor bescii DSM 6725] Length = 267 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 6/242 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K + V+ACNTA + L++ F P + A T++ I ++ T T+ Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDVPIVAVIEPGAEAAVRSTKNKKIGVIGTEGTIS 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + + + VEE ++ K+ +E E K D Sbjct: 123 SGAFEKKILELDNSIKVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFNEKAID 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + V R++ P V ++ + A++ LL + + F + Sbjct: 179 TLVLGCTHYPFLQDVIRKVLP-NVMLINPALETAKQVFELLKMNDMLNNSSEEPTYYFYA 237 Query: 254 GK 255 Sbjct: 238 SD 239 >gi|50913675|ref|YP_059647.1| glutamate racemase [Streptococcus pyogenes MGAS10394] gi|68052498|sp|Q5XDP9|MURI_STRP6 RecName: Full=Glutamate racemase gi|50902749|gb|AAT86464.1| Glutamate racemase [Streptococcus pyogenes MGAS10394] Length = 264 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 106/268 (39%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+ Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + + V ACNTA + +E+++T + LG V P A T G Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKATL-DIPVLGVVLPGASAAIKSTTKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE ++ KK + Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 DSLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + +H F + P+I Sbjct: 226 NYHQKAVEHRFFTTANPEIFQEIASIWL 253 >gi|163759593|ref|ZP_02166678.1| glutamate racemase [Hoeflea phototrophica DFL-43] gi|162283190|gb|EDQ33476.1| glutamate racemase [Hoeflea phototrophica DFL-43] Length = 263 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 121/260 (46%), Positives = 182/260 (70%), Gaps = 1/260 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +++FDSGIGGL VL++ R +MP F+YVADD GFPYG WE+ AL+ R++ LF+ ++ Sbjct: 3 ERPVVVFDSGIGGLSVLREARVIMPGRRFVYVADDAGFPYGAWEEGALRDRIVGLFAGLI 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K+ P L++IACNTA T++ LR+ +P + F+G VPAIK AA T+SGL+S+L+TP T+ Sbjct: 63 EKHNPALALIACNTASTIVMPALRAAYPELPFVGTVPAIKPAAERTKSGLVSVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT +LI Y + H+ LV S LA+ E Y + E +K EI+ CF+E++G++T Sbjct: 123 KRQYTRDLIRDYADKVHVRLVGSENLAALAETYMRKGFVDEAAVKAEIDPCFVERDGQKT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTHQTRVFDDHALF 251 D++VLACTH+P +V+ R+++PWPVDW+D +++IARRA ++ + H D +F Sbjct: 183 DIVVLACTHFPFLVNRMRKMAPWPVDWIDPAEAIARRALAIVDTLPGGHALPDARDSVVF 242 Query: 252 LSGKPDIAMRRLMQGFGLKS 271 SG PD + RLM GFGL + Sbjct: 243 TSGNPDYSALRLMHGFGLTA 262 >gi|15674511|ref|NP_268685.1| glutamate racemase [Streptococcus pyogenes M1 GAS] gi|71910117|ref|YP_281667.1| glutamate racemase [Streptococcus pyogenes MGAS5005] gi|20177988|sp|Q9A1B7|MURI_STRP1 RecName: Full=Glutamate racemase gi|158429234|pdb|2OHG|A Chain A, Structural Basis For Glutamte Racemase Inhibition gi|158429237|pdb|2OHV|A Chain A, Structural Basis For Glutamate Racemase Inhibition gi|13621614|gb|AAK33406.1| putative glutamate racemase [Streptococcus pyogenes M1 GAS] gi|71852899|gb|AAZ50922.1| glutamate racemase [Streptococcus pyogenes MGAS5005] Length = 264 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+ Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + + V ACNTA + +E+++ + LG V P A T G Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE ++ KK + Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 DSLAPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + +H F + P+I Sbjct: 226 NYHQKAVEHRFFTTANPEIFQEIASIWL 253 >gi|240850640|ref|YP_002972040.1| glutamate racemase [Bartonella grahamii as4aup] gi|240267763|gb|ACS51351.1| glutamate racemase [Bartonella grahamii as4aup] Length = 272 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 126/261 (48%), Positives = 177/261 (67%), Gaps = 3/261 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL V ++ R L+PE FIYVADD GFPYGNW+++ LK+R++ +F+++L Sbjct: 3 ERPVLFFDSGIGGLTVFREARILIPEMQFIYVADDAGFPYGNWKENILKERILKIFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +Y P L VIACNT TL+ +LR F + F+G VPAIK AA T+SG IS+L+TP T+ Sbjct: 63 TRYNPALCVIACNTVSTLMMADLRQNFSHVPFVGTVPAIKSAAEQTKSGFISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT+ LI+S+ QCH+ LV S LA E+Y G I +E++KEI CF+EK G+ T Sbjct: 123 KRAYTNELINSFAGQCHVQLVGSKKLAGFAEDYLRGKSINSEELRKEILPCFVEKNGQYT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDDHA 249 DVIVLACTHYP +++ FR+ + W V+W+D + +IA+ R LLP +++ + + D A Sbjct: 183 DVIVLACTHYPFLINFFREHALWSVEWIDPAKAIAKHIRSLLPLSEKVHDQYIKKYQDFA 242 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 L S L +GFGLK Sbjct: 243 LLTSKNITSLTENLFKGFGLK 263 >gi|298490221|ref|YP_003720398.1| glutamate racemase ['Nostoc azollae' 0708] gi|298232139|gb|ADI63275.1| glutamate racemase ['Nostoc azollae' 0708] Length = 284 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 9/263 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++ Q +I +FDSG+GGL VL+++ +P IY D PYG + + + + Sbjct: 15 SDQNSQPAIGVFDSGVGGLTVLRQIYKQLPNESIIYFGDTAHLPYGIRSQAEILQYVREI 74 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 + + + + ++ACNT+ L + +R F LG V P + A Q I ++ Sbjct: 75 L-KWMQQQRVKMVIMACNTSSALALENVRQEF-DFPILGVVLPGARAAVQ--QGKRIGVI 130 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +TPAT + I + VS +E+ +I + + + Sbjct: 131 ATPATAKSNAYRQAIMEIQPDVQVWQVSCPEFVPLIEQN----RIHDPYTTEVAKSYLEP 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D +V CTHYP + V L P V +D S + L ++ TR+ Sbjct: 187 LIKQEIDTLVYGCTHYPHLAPVLGALLPSYVKLVDPSVHVVAACAQELDLLSIRNTRLPM 246 Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269 +SG P + +Q G Sbjct: 247 PTRFAVSGCPQQFAQSGLQWLGY 269 >gi|38234423|ref|NP_940190.1| glutamate racemase [Corynebacterium diphtheriae NCTC 13129] gi|81564603|sp|Q6NFN4|MURI_CORDI RecName: Full=Glutamate racemase gi|38200686|emb|CAE50382.1| glutamate racemase [Corynebacterium diphtheriae] Length = 265 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 9/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++ Sbjct: 3 NAPIGIFDSGVGGLTVARVIMEQLPNESVIYIGDTANSPYGPKPIAQVRELSLAIGEELV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + VIACNTA + +LR F + LG + PA+++A + T++G I ++ T T Sbjct: 63 RRG-CKMIVIACNTATSAALRDLRERF-DVPVLGVILPAVRRAVSTTRNGKIGVIGTEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ L + +H + S VE + +I +G + Sbjct: 121 IKSGAYQELFAA-SPSVEVHAQACPSFVSFVERGITSGR----QILGVAQGYVEPLQAAG 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHYPL+ V + V + +++ A+ L + + F Sbjct: 176 VDTLVLGCTHYPLLTGVIQLAMGDRVTLVSSAEETAKDVFKTLSMTDMLASEDSTPVRTF 235 Query: 252 -LSGKPDIAMRRLMQGFG 268 +G P + + + G Sbjct: 236 ESTGDPVLFAQLAERFLG 253 >gi|56808577|ref|ZP_00366308.1| COG0796: Glutamate racemase [Streptococcus pyogenes M49 591] gi|94987933|ref|YP_596034.1| glutamate racemase [Streptococcus pyogenes MGAS9429] gi|94991817|ref|YP_599916.1| glutamate racemase [Streptococcus pyogenes MGAS2096] gi|209558858|ref|YP_002285330.1| glutamate racemase [Streptococcus pyogenes NZ131] gi|166231057|sp|Q1JDD6|MURI_STRPB RecName: Full=Glutamate racemase gi|166231058|sp|Q1JNA9|MURI_STRPC RecName: Full=Glutamate racemase gi|226707592|sp|B5XJX3|MURI_STRPZ RecName: Full=Glutamate racemase gi|94541441|gb|ABF31490.1| glutamate racemase [Streptococcus pyogenes MGAS9429] gi|94545325|gb|ABF35372.1| Glutamate racemase [Streptococcus pyogenes MGAS2096] gi|209540059|gb|ACI60635.1| Glutamate racemase [Streptococcus pyogenes NZ131] Length = 264 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 104/268 (38%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+ Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + + V ACNTA + +E+++ + LG V P A T G Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE ++ KK + Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 DSLAPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + H F + P+I Sbjct: 226 NYHQKAVKHRFFTTANPEIFQEIASIWL 253 >gi|293393497|ref|ZP_06637807.1| glutamate racemase [Serratia odorifera DSM 4582] gi|291423832|gb|EFE97051.1| glutamate racemase [Serratia odorifera DSM 4582] Length = 260 Score = 301 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 86/256 (33%), Positives = 142/256 (55%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + + +Y Sbjct: 2 LVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEQFIVERVLEIVGAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 + +IACNTA T+ LR+ F S +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LAIVIIACNTASTVSLPALRARF-SFPVVGVVPAIKPAAKLTANGIVGLLATRGTVQRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + + C I L+ S L E G ++ +KK ++ +E D +V Sbjct: 121 THELIARFATDCKIELLGSSELVELAEAKLHGEEVPLAALKKILQPWLSMREP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARRA L+ ++ ++ A ++ Sbjct: 179 LGCTHFPLLADELMQVLPQGTRLVDSGAAIARRAAWLISSQENLRSSQEENVAYCMALND 238 Query: 257 DI-AMRRLMQGFGLKS 271 D A+ ++Q +G S Sbjct: 239 DTDALLPVLQSYGFNS 254 >gi|21909798|ref|NP_664066.1| glutamate racemase [Streptococcus pyogenes MGAS315] gi|28896509|ref|NP_802859.1| glutamate racemase [Streptococcus pyogenes SSI-1] gi|25453114|sp|Q8K8I8|MURI_STRP3 RecName: Full=Glutamate racemase gi|21903983|gb|AAM78869.1| putative glutamate racemase [Streptococcus pyogenes MGAS315] gi|28811763|dbj|BAC64692.1| putative glutamate racemase [Streptococcus pyogenes SSI-1] Length = 264 Score = 301 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 104/268 (38%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+ Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + + V ACNTA + +E+++ + LG V P A T G Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE ++ KK + Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 DSLAPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + H F + P+I Sbjct: 226 NYHQKAVKHRFFTTANPEIFQEIASIWL 253 >gi|283787352|ref|YP_003367217.1| glutamate racemase [Citrobacter rodentium ICC168] gi|282950806|emb|CBG90482.1| glutamate racemase [Citrobacter rodentium ICC168] Length = 283 Score = 301 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 82/272 (30%), Positives = 143/272 (52%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNVAFPYGEKSEEFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + + L+VIACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQQRSPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ + Sbjct: 128 GIVGLLATRGTVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGKPVPLEELQRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + D +VL CTH+PL+ + P +D+ +IARR LL Sbjct: 188 RPWL--RMSEPPDTVVLGCTHFPLLKEELLHVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 246 AKSTAANIAYCMALTPETEQLLPVLQRYGFET 277 >gi|15924141|ref|NP_371675.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50] gi|15926734|ref|NP_374267.1| glutamate racemase [Staphylococcus aureus subsp. aureus N315] gi|21282762|ref|NP_645850.1| glutamate racemase [Staphylococcus aureus subsp. aureus MW2] gi|49485988|ref|YP_043209.1| glutamate racemase [Staphylococcus aureus subsp. aureus MSSA476] gi|57650260|ref|YP_186024.1| glutamate racemase [Staphylococcus aureus subsp. aureus COL] gi|87161415|ref|YP_493747.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194852|ref|YP_499650.1| glutamate racemase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267642|ref|YP_001246585.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH9] gi|150393697|ref|YP_001316372.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH1] gi|151221275|ref|YP_001332097.1| glutamate racemase [Staphylococcus aureus subsp. aureus str. Newman] gi|156979472|ref|YP_001441731.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu3] gi|161509325|ref|YP_001574984.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140452|ref|ZP_03564945.1| glutamate racemase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317067|ref|ZP_04840280.1| glutamate racemase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731764|ref|ZP_04865929.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733613|ref|ZP_04867778.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH130] gi|255005936|ref|ZP_05144537.2| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795120|ref|ZP_05644099.1| glutamate racemase [Staphylococcus aureus A9781] gi|258407172|ref|ZP_05680321.1| glutamate racemase [Staphylococcus aureus A9763] gi|258421737|ref|ZP_05684658.1| glutamate racemase [Staphylococcus aureus A9719] gi|258432919|ref|ZP_05688608.1| glutamate racemase [Staphylococcus aureus A9299] gi|258443409|ref|ZP_05691752.1| glutamate racemase [Staphylococcus aureus A8115] gi|258446082|ref|ZP_05694244.1| glutamate racemase [Staphylococcus aureus A6300] gi|258449805|ref|ZP_05697903.1| glutamate racemase [Staphylococcus aureus A6224] gi|258454904|ref|ZP_05702867.1| glutamate racemase [Staphylococcus aureus A5937] gi|262048731|ref|ZP_06021613.1| glutamate racemase [Staphylococcus aureus D30] gi|262051669|ref|ZP_06023888.1| glutamate racemase [Staphylococcus aureus 930918-3] gi|269202763|ref|YP_003282032.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED98] gi|282894178|ref|ZP_06302409.1| glutamate racemase [Staphylococcus aureus A8117] gi|282919928|ref|ZP_06327657.1| glutamate racemase [Staphylococcus aureus A9765] gi|282928673|ref|ZP_06336270.1| glutamate racemase [Staphylococcus aureus A10102] gi|284024075|ref|ZP_06378473.1| glutamate racemase [Staphylococcus aureus subsp. aureus 132] gi|294848141|ref|ZP_06788888.1| glutamate racemase [Staphylococcus aureus A9754] gi|295405955|ref|ZP_06815764.1| glutamate racemase [Staphylococcus aureus A8819] gi|296275637|ref|ZP_06858144.1| glutamate racemase [Staphylococcus aureus subsp. aureus MR1] gi|297208211|ref|ZP_06924641.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912288|ref|ZP_07129731.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH70] gi|304381292|ref|ZP_07363945.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54037867|sp|P63638|MURI_STAAN RecName: Full=Glutamate racemase gi|54037868|sp|P63639|MURI_STAAW RecName: Full=Glutamate racemase gi|54041261|sp|P63637|MURI_STAAM RecName: Full=Glutamate racemase gi|56749202|sp|Q6GA64|MURI_STAAS RecName: Full=Glutamate racemase gi|71151976|sp|Q5HGT3|MURI_STAAC RecName: Full=Glutamate racemase gi|122539773|sp|Q2FZC6|MURI_STAA8 RecName: Full=Glutamate racemase gi|123486328|sp|Q2FHT1|MURI_STAA3 RecName: Full=Glutamate racemase gi|166231056|sp|A7X179|MURI_STAA1 RecName: Full=Glutamate racemase gi|172048828|sp|A6QG53|MURI_STAAE RecName: Full=Glutamate racemase gi|189030372|sp|A6U0W7|MURI_STAA2 RecName: Full=Glutamate racemase gi|189030373|sp|A5IS36|MURI_STAA9 RecName: Full=Glutamate racemase gi|189030374|sp|A8Z1T2|MURI_STAAT RecName: Full=Glutamate racemase gi|13700950|dbj|BAB42246.1| glutamate racemase [Staphylococcus aureus subsp. aureus N315] gi|14246921|dbj|BAB57313.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50] gi|21204200|dbj|BAB94898.1| glutamate racemase [Staphylococcus aureus subsp. aureus MW2] gi|49244431|emb|CAG42859.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus MSSA476] gi|57284446|gb|AAW36540.1| glutamate racemase [Staphylococcus aureus subsp. aureus COL] gi|87127389|gb|ABD21903.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202410|gb|ABD30220.1| glutamate racemase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740711|gb|ABQ49009.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH9] gi|149946149|gb|ABR52085.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH1] gi|150374075|dbj|BAF67335.1| glutamate racemase [Staphylococcus aureus subsp. aureus str. Newman] gi|156721607|dbj|BAF78024.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu3] gi|160368134|gb|ABX29105.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724493|gb|EES93222.1| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728412|gb|EES97141.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH130] gi|257789092|gb|EEV27432.1| glutamate racemase [Staphylococcus aureus A9781] gi|257841327|gb|EEV65772.1| glutamate racemase [Staphylococcus aureus A9763] gi|257842070|gb|EEV66498.1| glutamate racemase [Staphylococcus aureus A9719] gi|257849359|gb|EEV73336.1| glutamate racemase [Staphylococcus aureus A9299] gi|257851499|gb|EEV75438.1| glutamate racemase [Staphylococcus aureus A8115] gi|257855140|gb|EEV78081.1| glutamate racemase [Staphylococcus aureus A6300] gi|257856725|gb|EEV79628.1| glutamate racemase [Staphylococcus aureus A6224] gi|257862784|gb|EEV85549.1| glutamate racemase [Staphylococcus aureus A5937] gi|259160404|gb|EEW45429.1| glutamate racemase [Staphylococcus aureus 930918-3] gi|259163187|gb|EEW47747.1| glutamate racemase [Staphylococcus aureus D30] gi|262075053|gb|ACY11026.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED98] gi|269940644|emb|CBI49023.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus TW20] gi|282589712|gb|EFB94798.1| glutamate racemase [Staphylococcus aureus A10102] gi|282594644|gb|EFB99628.1| glutamate racemase [Staphylococcus aureus A9765] gi|282763664|gb|EFC03793.1| glutamate racemase [Staphylococcus aureus A8117] gi|285816830|gb|ADC37317.1| Glutamate racemase [Staphylococcus aureus 04-02981] gi|294824941|gb|EFG41363.1| glutamate racemase [Staphylococcus aureus A9754] gi|294969390|gb|EFG45410.1| glutamate racemase [Staphylococcus aureus A8819] gi|296886950|gb|EFH25853.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|298694438|gb|ADI97660.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED133] gi|300886534|gb|EFK81736.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH70] gi|302332758|gb|ADL22951.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus JKD6159] gi|302750973|gb|ADL65150.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340275|gb|EFM06216.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829543|emb|CBX34385.1| glutamate racemase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128549|gb|EFT84554.1| glutamate racemase [Staphylococcus aureus subsp. aureus CGS03] gi|315196875|gb|EFU27218.1| glutamate racemase [Staphylococcus aureus subsp. aureus CGS01] gi|320141035|gb|EFW32882.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143092|gb|EFW34882.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA177] gi|323440701|gb|EGA98411.1| glutamate racemase [Staphylococcus aureus O11] gi|323442356|gb|EGA99985.1| glutamate racemase [Staphylococcus aureus O46] gi|329313818|gb|AEB88231.1| Glutamate racemase [Staphylococcus aureus subsp. aureus T0131] gi|329725174|gb|EGG61663.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21172] gi|329728845|gb|EGG65266.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21193] gi|329730728|gb|EGG67107.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21189] Length = 266 Score = 301 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 102/261 (39%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ + I Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 +D ++L CTHYPL+ + + AR LL N H + DH Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G P + + L Sbjct: 236 FFATGDPTHITNIIKEWLNLS 256 >gi|153853948|ref|ZP_01995281.1| hypothetical protein DORLON_01272 [Dorea longicatena DSM 13814] gi|149753330|gb|EDM63261.1| hypothetical protein DORLON_01272 [Dorea longicatena DSM 13814] Length = 316 Score = 301 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 8/255 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + + +I +FDSG+GGL V +++ +P + +Y D PYG+ + + + + Sbjct: 47 KNRNTAAIGVFDSGVGGLTVTREIMRQLPNENVVYFGDTARVPYGSKSKNNIIRFSRQII 106 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L VIACNTA L + ++ F + +G + P + A T++G I +L Sbjct: 107 -RFLKTKNVKAIVIACNTASALALETVQQEF-DIPIIGVIVPGARAAVRETRNGQIGVLG 164 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++ + I + + + + VEE KI E+ I+ + Sbjct: 165 TEATIKSETYTKEIRKLMPEAEVIGKPCPLFVPLVEEGFAKHKITEE----VIDIYLSDM 220 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD- 246 D ++L CTHYPL+ V ++ + A + +L T Sbjct: 221 RKSEIDTLILGCTHYPLLRSRIMAYFGEKVHIVNPAYETAMDLKKILEEQKIANTSGEPA 280 Query: 247 DHALFLSGKPDIAMR 261 + ++S + + Sbjct: 281 AYDFYVSDAAEKFKK 295 >gi|19745519|ref|NP_606655.1| glutamate racemase [Streptococcus pyogenes MGAS8232] gi|139474362|ref|YP_001129078.1| glutamate racemase [Streptococcus pyogenes str. Manfredo] gi|24418567|sp|Q8P2D3|MURI_STRP8 RecName: Full=Glutamate racemase gi|166231061|sp|A2RG97|MURI_STRPG RecName: Full=Glutamate racemase gi|19747638|gb|AAL97154.1| putative glutamate racemase [Streptococcus pyogenes MGAS8232] gi|134272609|emb|CAM30876.1| glutamate racemase [Streptococcus pyogenes str. Manfredo] Length = 264 Score = 301 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+ Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + + V ACNTA + +E+++ + LG V P A T G Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE ++ KK + Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 DSLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + +H F + P+I Sbjct: 226 NYHQKAVEHRFFTTANPEIFQEIASIWL 253 >gi|317500702|ref|ZP_07958920.1| glutamate racemase [Lachnospiraceae bacterium 8_1_57FAA] gi|316897896|gb|EFV19949.1| glutamate racemase [Lachnospiraceae bacterium 8_1_57FAA] Length = 273 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 8/257 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + K + +FDSG+GGL V +++ +P + +Y D PYG+ + + + + Sbjct: 1 MDCKKTAPVGVFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTIIRFSEQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 L Q VIACNTA L D +R F +P + A T++ + ++ Sbjct: 61 I-RFLKTKQVKAIVIACNTASALALDAVRDEFDIPIMGVVIPGARAAVETTRNQKVGVIG 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++ + +I S + + + VEE + E+ IE Sbjct: 120 TDATVQSGMYTKVIQSMAPDIEVIEKACPLFVPLVEEGFKEHVVTEE----VIEYYLESM 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + D ++L CTHYPL+ R + ++ + A + LL Sbjct: 176 RHTQIDAMILGCTHYPLLRSKIRDYLGEEIKIVNPAYETAMDLKKLLYEKEMANDGTDAQ 235 Query: 248 H---ALFLSGKPDIAMR 261 H + ++S + R Sbjct: 236 HSVYSFYVSDAAEKFRR 252 >gi|71902958|ref|YP_279761.1| glutamate racemase [Streptococcus pyogenes MGAS6180] gi|123640458|sp|Q48V50|MURI_STRPM RecName: Full=Glutamate racemase gi|71802053|gb|AAX71406.1| glutamate racemase [Streptococcus pyogenes MGAS6180] Length = 264 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 104/268 (38%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+ Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + + V ACNTA + +E+++ + LG V P A T G Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE ++ KK + Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 DSLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + H F + P+I Sbjct: 226 NYHQKAVKHRFFTTANPEIFQEIASIWL 253 >gi|312126950|ref|YP_003991824.1| glutamate racemase [Caldicellulosiruptor hydrothermalis 108] gi|311776969|gb|ADQ06455.1| glutamate racemase [Caldicellulosiruptor hydrothermalis 108] Length = 267 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 6/242 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K + V+ACNTA + L++ F P + A T++ I ++ T T+ Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKKIGVIGTEGTVA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I S + + VEE ++ K+ +E E K D Sbjct: 123 SGAFKKKILELDSSIKVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFNEKEID 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + V +++ P V ++ + A++ +L + + F + Sbjct: 179 TLVLGCTHYPFLQDVIKKVLP-DVMLINPALETAKQVFEVLKENDMLNNSSEEPTYYFYA 237 Query: 254 GK 255 Sbjct: 238 SD 239 >gi|297246515|ref|ZP_06930353.1| glutamate racemase [Staphylococcus aureus A8796] gi|297176621|gb|EFH35884.1| glutamate racemase [Staphylococcus aureus A8796] Length = 266 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 102/261 (39%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQFTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ + I Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 +D ++L CTHYPL+ + + AR LL N H + DH Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G P + + L Sbjct: 236 FFATGDPTHITNIIKEWLNLS 256 >gi|197116675|ref|YP_002137102.1| glutamate racemase [Geobacter bemidjiensis Bem] gi|197086035|gb|ACH37306.1| glutamate racemase [Geobacter bemidjiensis Bem] Length = 278 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L Sbjct: 4 KAIGIFDSGVGGLTVLKEVVRALPQEDTIYLGDTARVPYGTKSPETVVRYSRQITRYLLS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + V+ACNTA + L+ F P + AAA T+SG + ++ T AT+ Sbjct: 64 R-DIKVLVVACNTASAVALSALQQEFSIPIVGVIEPGARAAAAVTKSGKVGVIGTTATVA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG-CFIEKEGKRT 192 + + I + + + + EE ++E+ + G + + Sbjct: 123 SSAYTKAIKRINPEIEVVSRACPLFVPLAEEGWV-----DNEVARLTAGIYLEDLKKHGV 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251 D +VL CTHYP++ V ++ V +D ++ A +L + + +H + Sbjct: 178 DTLVLGCTHYPILRKVIAEVMGPEVTLVDAAEQTALTVAGILAEQGLLRPKGERGNHHYY 237 Query: 252 LSGKPDIAMRRLMQGFG 268 ++ P +R + G Sbjct: 238 VTDIPAGFIRIGNRFLG 254 >gi|90420932|ref|ZP_01228837.1| glutamate racemase [Aurantimonas manganoxydans SI85-9A1] gi|90334907|gb|EAS48679.1| glutamate racemase [Aurantimonas manganoxydans SI85-9A1] Length = 268 Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats. Identities = 131/264 (49%), Positives = 183/264 (69%), Gaps = 7/264 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL+++R MP+ FIYVADD GFPYG+WE+ L R++ LF+++ Sbjct: 1 MNAPILVFDSGIGGLTVLRELRTAMPDRRFIYVADDAGFPYGDWEEEPLVARILDLFAEL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +D Y+P L+VIACNTA TL+ +LR+ F ++ F+G VPAIK A T+SGL+S+L+TP T Sbjct: 61 IDTYEPSLAVIACNTASTLVLPQLRARF-AIPFVGTVPAIKPATERTRSGLVSVLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-----YACGIKIKEDEIKKEIEGCFIE 186 +RR YT +L+ ++ + C + LV S LA E A G + +D + EI CF+E Sbjct: 120 VRRVYTRDLVEAFATHCEVRLVGSPELARLAERSLLDSEASGDQELDDAMAAEIAPCFVE 179 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 G+RTD++VLACTHYPLI + FR+L+PWPVDWLD +++IARRAR L + + + Sbjct: 180 AGGQRTDIVVLACTHYPLIANHFRRLAPWPVDWLDPAEAIARRARS-LCKPGSGELPEGF 238 Query: 247 DHALFLSGKPDIAMRRLMQGFGLK 270 D A F G P MRRL++GFGL+ Sbjct: 239 DSAHFTGGAPGYQMRRLVRGFGLE 262 >gi|322417854|ref|YP_004197077.1| glutamate racemase [Geobacter sp. M18] gi|320124241|gb|ADW11801.1| glutamate racemase [Geobacter sp. M18] Length = 279 Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 6/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L+ Sbjct: 4 KAIGIFDSGVGGLTVLKEVVQALPQEDTIYLGDTARVPYGTKSPETVIRYSRQIARYLLN 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L V+ACNTA + L+ F P + AAA T++G + ++ T AT+ Sbjct: 64 R-DIKLLVVACNTASAVALSALQQEFDIPIVGVIEPGARAAAAATRTGRVGVIGTAATVA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + I + + + EE + + +E + + + D Sbjct: 123 SSAYTKAIKRINPDIEVVNRACPLFVPLAEEGWVDNDVARMTARLYLE----DLKQQGVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252 +VL CTHYP++ V Q+ V +D++ AR +L + +H ++ Sbjct: 179 TLVLGCTHYPILKEVIAQVMGPEVTLVDSAAETARTVARILSEQGLLRPVNERGNHHYYV 238 Query: 253 SGKPDIAMRRLMQGFG 268 + P +R + G Sbjct: 239 TDIPAGFIRVGNRFLG 254 >gi|283470360|emb|CAQ49571.1| glutamate racemase [Staphylococcus aureus subsp. aureus ST398] Length = 266 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ + I Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKRWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 + D ++L CTHYPL+ + + AR LL N H + DH Sbjct: 176 KADTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G + + L Sbjct: 236 FFATGDTTHITNIIKEWLNLS 256 >gi|319404222|emb|CBI77815.1| Glutamate racemase [Bartonella rochalimae ATCC BAA-1498] Length = 270 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 127/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + S+L FDSGIGGL +L+++R + EY FIY+AD+ GFPYG WE+ LK+R++ +F+ +L Sbjct: 3 KQSLLFFDSGIGGLTILREVRLFVSEYQFIYIADNAGFPYGIWEEEILKRRILKIFTYLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Y P L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SG+IS+L+TP+T+ Sbjct: 63 ELYNPALCVIACNTASTLMIKDLRRAFPNIRFVGTVPAIKLAAEQTKSGVISVLATPSTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI+S+ QCH+ LV S LA E Y G + +E++ EI CFIEK K T Sbjct: 123 RCAYTHELINSFADQCHVQLVGSEKLAGFAENYLHGYPVNHEELRHEILPCFIEKNSKLT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251 D IVLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP + + D ALF Sbjct: 183 DTIVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPINVQNKNMKKHTDFALF 242 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S A L+Q F LK Sbjct: 243 TSQNISPATENLLQKFHLK 261 >gi|22537740|ref|NP_688591.1| glutamate racemase [Streptococcus agalactiae 2603V/R] gi|76787427|ref|YP_330218.1| glutamate racemase [Streptococcus agalactiae A909] gi|76799029|ref|ZP_00781224.1| glutamate racemase [Streptococcus agalactiae 18RS21] gi|77408489|ref|ZP_00785227.1| glutamate racemase [Streptococcus agalactiae COH1] gi|29839527|sp|Q8DY92|MURI_STRA5 RecName: Full=Glutamate racemase gi|123601417|sp|Q3JZT5|MURI_STRA1 RecName: Full=Glutamate racemase gi|22534630|gb|AAN00464.1|AE014264_19 glutamate racemase [Streptococcus agalactiae 2603V/R] gi|76562484|gb|ABA45068.1| glutamate racemase [Streptococcus agalactiae A909] gi|76585615|gb|EAO62178.1| glutamate racemase [Streptococcus agalactiae 18RS21] gi|77172931|gb|EAO76062.1| glutamate racemase [Streptococcus agalactiae COH1] Length = 264 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 106/268 (39%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D+ P I DSG+GGL V+++M +PE I++ D PYG +++ Sbjct: 1 MDSRP--------IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K + VIACNTA + E++ + LG + P A T G Sbjct: 53 FTWQMVNFLLTK-NVKMIVIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNLG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + I+ TP T++ I + + ++ VE ++ KK + Sbjct: 111 KVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKVVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D ++L CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 ETLSPLVGK-LDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINH 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + H + + P Q Sbjct: 226 NWQNKHGGHHFYTTASPKGFKEIAEQWL 253 >gi|259508024|ref|ZP_05750924.1| glutamate racemase [Corynebacterium efficiens YS-314] gi|29839541|sp|Q8FMU6|MURI_COREF RecName: Full=Glutamate racemase gi|259164365|gb|EEW48919.1| glutamate racemase [Corynebacterium efficiens YS-314] Length = 273 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 112/269 (41%), Gaps = 10/269 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + P I IFDSG+GGL V + + +P IY+ D PYG +++ Sbjct: 1 MIERPIP-GADAPIGIFDSGVGGLTVARTIIDQLPHESIIYIGDTANGPYGPLPIARVRE 59 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + +++++ + VIACNTA + R + +PA+++A A T++G Sbjct: 60 HALRIADELVERG-CKMIVIACNTASAAFLRDARERYDVPVVEVILPAVRRAVAATRNGK 118 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + ++ T T+ +L + +H + VE + +I EG Sbjct: 119 VGVIGTVGTINSGAYQDLFAA-SPSIEVHAAACPRFVDFVERGITSGR----QILNIAEG 173 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + + D +VL CTHYPL+ V + V + +++ A+ +L + + Sbjct: 174 YLEPLQAQGVDTLVLGCTHYPLLSGVIQLAMGDHVTLVSSAEETAKDVLRILSQNDLLAD 233 Query: 243 ---RVFDDHALFLSGKPDIAMRRLMQGFG 268 ++ +G P++ + + G Sbjct: 234 PTMHPTPTYSFESTGDPELFSQLSRRFLG 262 >gi|315652855|ref|ZP_07905828.1| glutamate racemase [Eubacterium saburreum DSM 3986] gi|315484886|gb|EFU75295.1| glutamate racemase [Eubacterium saburreum DSM 3986] Length = 269 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 7/250 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L I +FDSG+GGL V +++ MP +Y D PYG+ + K + + + Sbjct: 4 LNLPIGVFDSGVGGLTVAREIISQMPNEGIVYFGDTARVPYGSKSKDTVIKYSRQIVNFL 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130 K VIACNTA D L++ ++ +G + A A T+ G I ++ T Sbjct: 64 QTK-NVKAIVIACNTASAFALDILKTEI-NIPIIGVIHAGAITATKTTKVGRIGVVGTNG 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ IH S+ + + +L VEE + ++ I + + E + + Sbjct: 122 TISSGIYEKTIHEINSELEVIQKACPLLVPLVEEGLINDSVTDEIISRYV----SELKSR 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTHYPL+ + FR++ V ++ + A+ + LL R N H Sbjct: 178 HIDSLVLGCTHYPLLYNTFRRIMGEGVSLVNPAYETAKELKSLLIRENLCAGDGEVFHEF 237 Query: 251 FLSGKPDIAM 260 ++S + Sbjct: 238 YVSDMAERFS 247 >gi|253698914|ref|YP_003020103.1| glutamate racemase [Geobacter sp. M21] gi|251773764|gb|ACT16345.1| glutamate racemase [Geobacter sp. M21] Length = 278 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L+ Sbjct: 4 KAIGIFDSGVGGLTVLKEVVRALPQEDTIYLGDTARVPYGTKSPETVVRYSRQIARYLLN 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L V+ACNTA + L+ F P + AAA T+SG + ++ T AT+ Sbjct: 64 R-DIKLLVVACNTASAVALSALQQEFSIPIVGVIEPGARAAAAATKSGKVGVIGTAATVA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG-CFIEKEGKRT 192 + + I + + + EE ++E+ + G + + Sbjct: 123 SSAYTKAIKRINPDIEVVNRACPLFVPLAEEGWV-----DNEVARLTAGIYLEDLKKHGV 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251 D +VL CTHYP++ V ++ V +D+++ A +L + + +H + Sbjct: 178 DTLVLGCTHYPILKDVIAEVMGPEVTLVDSAEQTALTVAGILGEQGLLRPKGERGNHHYY 237 Query: 252 LSGKPDIAMRRLMQGFG 268 ++ P +R + G Sbjct: 238 VTDIPAGFIRVGNRFLG 254 >gi|297618209|ref|YP_003703368.1| glutamate racemase [Syntrophothermus lipocalidus DSM 12680] gi|297146046|gb|ADI02803.1| glutamate racemase [Syntrophothermus lipocalidus DSM 12680] Length = 273 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 6/249 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL V++++ +P + IY+ D PYG L RL D L Sbjct: 5 QPVGVFDSGVGGLTVVKEIIKRLPCENIIYIGDTANVPYGGKPPQELI-RLGKNIIDFLI 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 V ACNT+ ++ LR P VP AAA T++G + +++T AT++ Sbjct: 64 NQGAKAVVAACNTSSSVSIPILRDMCPVPVIDVIVPGAANAAAVTRNGRVGVIATEATVK 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + I + ++ V+ VE+ ++ DE+++ + D Sbjct: 124 TGAYTRHIKALSPGISVYEVACPRFVPLVEQGV----LEGDEVEEVANEYLQPLRRQGID 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTHQTRVFDDHALFL 252 +V+ CTHYP ++ V +++ V +D ++ A R R LL R + + F Sbjct: 180 TLVIGCTHYPFLIPVIQKVMGKGVRLVDPAEETASRLRATLLERGLDNPGTTSPQYRFFA 239 Query: 253 SGKPDIAMR 261 +G + R Sbjct: 240 TGSSESFFR 248 >gi|307243173|ref|ZP_07525346.1| glutamate racemase [Peptostreptococcus stomatis DSM 17678] gi|306493434|gb|EFM65414.1| glutamate racemase [Peptostreptococcus stomatis DSM 17678] Length = 270 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 16/267 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN +I +FDSG+GGL VL+++ +P IY D PYG+ + K Sbjct: 1 MDNR--------AIGVFDSGLGGLTVLKEINKYLPNEDTIYFGDTARVPYGSRSKETIIK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSG 121 + L VIACNTA E R + + +G + A + A T++ Sbjct: 53 YTFQAIN-FLASQNVKAIVIACNTASARALLEAREEY-DIPIMGVIEAGARTAVYSTRNK 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++ ++ T AT+R + I + S + + I VEE +I ++ Sbjct: 111 VVGVIGTTATVRSKAYNKAIKAKDSGIRVIGKACPIFVPLVEEGWSNKEISTMAAHMYLD 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 K D +VL CTHYP++ ++ V ++ + A + +L + + Sbjct: 171 S----LVEKGIDSLVLGCTHYPILKRTIGEVVGKDVKLINPAKETALDLKDVLEKRDMMN 226 Query: 242 -TRVFDDHALFLSGKPDIAMRRLMQGF 267 + F+S + + + Sbjct: 227 DSDQKGSCKYFVSDINEQFSKVASEFL 253 >gi|119490901|ref|ZP_01623184.1| glutamate racemase [Lyngbya sp. PCC 8106] gi|119453719|gb|EAW34878.1| glutamate racemase [Lyngbya sp. PCC 8106] Length = 284 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 9/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I +FDSG+GGL VL+++ +P +Y D PYG + + + + Sbjct: 5 KKARKIAVFDSGVGGLTVLRELYQQLPNESILYFGDTARLPYGTRSQSEILQFVREIIIW 64 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +D+ + V+ACNT+ L + ++S F ++ LG + P K A + I +++TP Sbjct: 65 AIDQ-DVKMIVMACNTSSALALETVQSEF-NVPILGVILPGAKAAVQ--KGRRIGVIATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ I + + VS +E+ +I + + + Sbjct: 121 ATVTSNAYRQAIQEMDATVQVWQVSCPEFVPLIEQN----RIHDPYTYQVAQEYLAPLLD 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 +R D ++ CTHYP + V R L P V +D + + + L + + Sbjct: 177 QRIDTLIYGCTHYPHLAPVLRSLLPPSVQLVDPAVHLVKAITQELELLGLQNPNLPRPTR 236 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 +SG P +Q G Sbjct: 237 FCVSGCPQQFASVSVQWLGY 256 >gi|260595994|ref|YP_003208565.1| glutamate racemase [Cronobacter turicensis z3032] gi|260215171|emb|CBA26986.1| Glutamate racemase [Cronobacter turicensis z3032] Length = 288 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 142/263 (53%), Gaps = 4/263 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + + +IL+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + Sbjct: 22 PSEARPTILVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIV 81 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + + +Y L+VIACN+A T+ LR F + +G VPAIK AA T +G++ +L+T Sbjct: 82 TAVQARYPLALAVIACNSASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLAT 140 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R YT LI + ++C I ++ S L E G + + +++ + E Sbjct: 141 RGTVKRPYTHELIARFANECQIEMLGSAELVEIAEAKLHGEPVSLEALRRVLRPWLRMPE 200 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D +VL CTH+PL+ Q+ P +D+ +IARR LL ++ Sbjct: 201 P--PDTVVLGCTHFPLLADELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDACSFDENI 258 Query: 249 ALFLSGKPDIA-MRRLMQGFGLK 270 A ++ P++A + ++Q +G Sbjct: 259 AYCMALTPEVAQLMSVLQRYGFN 281 >gi|172037379|ref|YP_001803880.1| glutamate racemase [Cyanothece sp. ATCC 51142] gi|171698833|gb|ACB51814.1| glutamate racemase [Cyanothece sp. ATCC 51142] Length = 281 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 9/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+++ +P+ +Y AD PYGN E + + + + + Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGNREASEILQFVREILVWM- 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + ++ACNT+ L + +R F + LG + P K A Q I ++STPAT Sbjct: 65 TQQNVKMVIMACNTSSALALEAVRQEF-DVPILGVILPGAKAAVK--QGKRIGVISTPAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I + + V +E+ +I + K+ + Sbjct: 122 AKSQAYRQAIQEINPEAQVWQVGCPQFVPLIEQN----RIWDVYTKQVAQEYLSPLLAHD 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++ CTHY + + + + P + +D + + + A+ L + +T Sbjct: 178 IDTLIYGCTHYRHLEALIKTIIPPTIKLIDPASYVVQAAKKELELMGLSKTASASPTRFA 237 Query: 252 LSGKPDIAMRRLMQGFGL 269 +SG D R Q G Sbjct: 238 VSGCSDTFSRLSQQWLGY 255 >gi|147677257|ref|YP_001211472.1| glutamate racemase [Pelotomaculum thermopropionicum SI] gi|146273354|dbj|BAF59103.1| glutamate racemase [Pelotomaculum thermopropionicum SI] Length = 265 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I FDSG+GGL V+++ R L+P FIY AD PYG+ L+KR + +L+ Sbjct: 5 GPIGFFDSGVGGLSVMKEARALLPSEDFIYFADSAYCPYGDKPPEVLRKRAFAICDFLLE 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNT D++R + S+ +G PA+K A + T++G I +L+T TL Sbjct: 65 RG-TRLIVIACNTISIAALDDVR-RYVSVPVVGIEPAVKPAVSATRNGKIGVLATGVTLA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ Y ++ L VE + E EI +E + D Sbjct: 123 GERFNALVRRYGRGIEVYTQPCPGLVELVESG--NWERPEAEIM--LERYLGPLLARGVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFL 252 +VL CTHYP + + +L+ V +D ++AR+ + +L + F Sbjct: 179 TVVLGCTHYPFLRPLVEKLAGGGVTVIDTGRAVARQIKNVLEASGLASGKTAPGTERFFT 238 Query: 253 SGKPDIAMRRLMQGFG 268 S +P++ + +G Sbjct: 239 SARPEVVEPVVRALWG 254 >gi|17227590|ref|NP_484138.1| glutamate racemase [Nostoc sp. PCC 7120] gi|11386941|sp|Q9L870|MURI_ANASP RecName: Full=Glutamate racemase gi|6969397|gb|AAF33755.1|AF216288_2 putative glutamate racemase [Nostoc sp. PCC 7120] gi|17135072|dbj|BAB77618.1| glutamate racemase [Nostoc sp. PCC 7120] Length = 292 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 102/263 (38%), Gaps = 9/263 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++ + I +FDSG+GGL VL+++ +P IY D PYG + + + Sbjct: 16 AQEPQRAPIGVFDSGVGGLTVLRQIYRQLPNESVIYFGDTARLPYGIRSQAEILTFVRDI 75 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 D + + + V+ACNT+ L D +R + LG + P K A Q I ++ Sbjct: 76 L-DWMQQQHVKMVVMACNTSSALALDIVREEY-DFPILGVILPGAKAAVQ--QGKRIGVI 131 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 STPAT + I + V +E+ +I++ + Sbjct: 132 STPATAKSNAYRQAIWEIDPNVEVWQVGCPEFVPLIEQN----RIQDPYTTEVARAYLEP 187 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D +V CTHYPL+ V R L P V +D + + L + T Sbjct: 188 LIQQDIDTLVYGCTHYPLLAPVLRSLLPPQVKIIDPAVHVVTACTQELDLLGLSNTHPPL 247 Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269 +SG P + + G Sbjct: 248 PTRFAVSGCPQQFSQSGVHWLGY 270 >gi|257058497|ref|YP_003136385.1| glutamate racemase [Cyanothece sp. PCC 8802] gi|256588663|gb|ACU99549.1| glutamate racemase [Cyanothece sp. PCC 8802] Length = 281 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 9/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+++ +P+ +Y AD PYGN + + + + + Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESMLYFADTARLPYGNRSGAEILQYVREILVWM- 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + ++ACNT+ L D +RS F + LG + P + A Q I ++STPAT Sbjct: 65 SQQNVKMVIMACNTSSALALDIVRSEF-NFPILGVILPGARAAVK--QGQRIGVISTPAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I + + V +E +I + K+ + Sbjct: 122 AKSNAYRQAIQEINPKAQVWQVGCPEFVPLIEAN----RIHDPYTKQVAWKYLAPLLAQN 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +V CTHY + +F+++ P V+ +D ++ + A+ L + Sbjct: 178 IDTLVYGCTHYRHLSPIFQEIIPPTVNLIDPANFVVAAAKKELELMGLRHNEPPRPTRFA 237 Query: 252 LSGKPDIAMRRLMQGFGL 269 +SG P + Q G Sbjct: 238 VSGCPQTFSQISQQWLGY 255 >gi|326803296|ref|YP_004321114.1| glutamate racemase [Aerococcus urinae ACS-120-V-Col10a] gi|326650395|gb|AEA00578.1| glutamate racemase [Aerococcus urinae ACS-120-V-Col10a] Length = 273 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 110/260 (42%), Gaps = 10/260 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I DSG+GGL V+++ +P IY+ D+ PYG + + + L + Sbjct: 1 MKRPIGFLDSGVGGLTVVKEAMRQLPNESIIYIGDNARCPYGPRPEAEINEFTQELVDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L++ + VIACNTA + + +R ++ +G + P + A Y+++G I IL+T A Sbjct: 61 LEQ-NIKMLVIACNTATAVSLERIRQRV-NIPVIGVIHPGARAANRYSENGHIGILATEA 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + N++ + ++ + VE I KK + + + Sbjct: 119 TINSHFYQNVLLDHNKHLILYPLVCSKFVPLVESGQYSSPIA----KKIVAESLYDLKQT 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--- 247 D ++L CTHYPL+ + ++ V +++ +L N ++ + Sbjct: 175 AIDTLILGCTHYPLLAPLIQKFMGPGVRLVNSGAETVSDVSAILDLYNLAESSWNPEAAT 234 Query: 248 HALFLSGKPDIAMRRLMQGF 267 + + +G + Sbjct: 235 YQFYTTGGVTMFKDIAKTWL 254 >gi|258451847|ref|ZP_05699868.1| glutamate racemase [Staphylococcus aureus A5948] gi|257860455|gb|EEV83282.1| glutamate racemase [Staphylococcus aureus A5948] Length = 266 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 102/261 (39%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ + I Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWCNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 +D ++L CTHYPL+ + + AR LL N H + DH Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G P + + L Sbjct: 236 FFATGDPTHITNIIKEWLNLS 256 >gi|312958853|ref|ZP_07773372.1| Glutamate racemase [Pseudomonas fluorescens WH6] gi|311286623|gb|EFQ65185.1| Glutamate racemase [Pseudomonas fluorescens WH6] Length = 264 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 5/243 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GG+ VL +++ L+P +YVAD PYG + +R + Sbjct: 4 DAPIGVFDSGVGGVSVLDEIQRLLPHESLLYVADGGHIPYGEKTPAFILERSRRVAEFFR 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K VIACNTA +LR FP +G PA+K AAA T++G++ +L+T TL Sbjct: 64 EKGA-KAFVIACNTATVAAVADLRQDFPDWPLVGMEPAVKPAAAATRAGVVGVLATTGTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + ++ ++G Sbjct: 123 QSAKFAALLDRFATDVRVITQPCPGLVELIETG----DLTSPALRTLLQGYIDPLLSAGC 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTHYP + + Q+ P + +D ++AR+ + LL + + Sbjct: 179 DTIILGCTHYPFLKPLLAQMLPSSITLIDTGAAVARQLKRLLGERDLLAVANPAPAQFWT 238 Query: 253 SGK 255 SG Sbjct: 239 SGD 241 >gi|330861644|emb|CBX71822.1| glutamate racemase [Yersinia enterocolitica W22703] Length = 287 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 88/271 (32%), Positives = 142/271 (52%), Gaps = 9/271 (3%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 K D P L IFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + Sbjct: 19 KADTAPRPTAL-----IFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIV 73 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +R++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G Sbjct: 74 ERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNG 132 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++ +L+T T+ +YT +LI + + C I L+ S L E G + ++ +KK + Sbjct: 133 VVGLLATRGTVHASYTQDLIERFATDCKIELLGSSELVELAETKLHGGVVPKEALKKILH 192 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ Sbjct: 193 PWLAMREP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENMI 250 Query: 242 TRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271 + ++ A ++ D A+ ++QG+G S Sbjct: 251 SSDEENIAYCMALNADTDALLPVLQGYGFPS 281 >gi|218291114|ref|ZP_03495129.1| glutamate racemase [Alicyclobacillus acidocaldarius LAA1] gi|218238925|gb|EED06133.1| glutamate racemase [Alicyclobacillus acidocaldarius LAA1] Length = 281 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 6/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I +FDSGIGGL V M+ +P +Y D PYG+ + +++ + + Sbjct: 4 AHRPIGVFDSGIGGLTVFHAMKRRLPHESMVYFGDRARCPYGDRDPQEVERFALEI-GRY 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ L V+ACNTA + L+ P QA +++G I ++ T T Sbjct: 63 LECLGIKLLVVACNTATAVALPRLKEELGIEVVGVIEPGASQAIEASETGRIGVIGTSVT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + ++ + + + V+ + VE+ ++ D ++ + +R Sbjct: 123 VSSHAYADALRALRPDVSVIEVACPLFVPLVEQG----HVEGDAVEAVVHESLQPLLQER 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250 D +VL CTHYPL++ V R++ + + ++D+ A+R LL D Sbjct: 179 IDTLVLGCTHYPLLMPVIRRVLGPAIRVISSADATAQRVARLLAERGLEAPDDHVPDACF 238 Query: 251 FLSGKPDIAMRRLMQGFG 268 +G L FG Sbjct: 239 LTTGDTTSLRMALATWFG 256 >gi|239782122|pdb|3HFR|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes gi|239782123|pdb|3HFR|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes gi|259090342|pdb|3IST|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes In Complex With Succinic Acid gi|259090343|pdb|3IST|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes In Complex With Succinic Acid gi|259090345|pdb|3ISV|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes In Complex With Acetate Ion gi|259090346|pdb|3ISV|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria Monocytogenes In Complex With Acetate Ion Length = 269 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 8/257 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I DSG+GGL V++++ +P Y+ D PYG + + K + ++ Sbjct: 5 KQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEXTNFLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 D+ L VIACNTA ++R + +G + P + A T++ I +L T T Sbjct: 65 DRGIKXL-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLGT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + ++ S VE + K KK + + + + Sbjct: 123 VESXAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKSTK 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHAL 250 D ++L CTHYPL+ + V +++ + A LL N + +H Sbjct: 179 IDTVILGCTHYPLLKPIIENFXGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRF 238 Query: 251 FLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 239 FTTGSTQIFKDIAKDWL 255 >gi|312876812|ref|ZP_07736790.1| glutamate racemase [Caldicellulosiruptor lactoaceticus 6A] gi|311796431|gb|EFR12782.1| glutamate racemase [Caldicellulosiruptor lactoaceticus 6A] Length = 267 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 6/242 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K + V+ACNTA + L++ F P + A T++ I ++ T T+ Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKRIGVIGTEGTIA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I S + + VEE ++ K+ +E E K D Sbjct: 123 SGAFEKKILELDSSLQVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFNEKEID 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +V+ CTHYP + V +++ P V ++ + A++ LL + + + F + Sbjct: 179 TLVMGCTHYPFLQDVIKKVLP-DVMLINPALETAKQVFELLKENDMLNSSSEEPTYYFYA 237 Query: 254 GK 255 Sbjct: 238 SD 239 >gi|296118692|ref|ZP_06837268.1| glutamate racemase [Corynebacterium ammoniagenes DSM 20306] gi|295968181|gb|EFG81430.1| glutamate racemase [Corynebacterium ammoniagenes DSM 20306] Length = 265 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 10/260 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V + + +P+ IYV D PYG E ++ + D++ Sbjct: 5 APIGIFDSGVGGLTVARTIMEQLPQESIIYVGDTAHAPYGPRELEDVQNLSRAIADDLVA 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + VIACNTA DE R + PA+++A A T++ + ++ T T+ Sbjct: 65 RG-CKMLVIACNTATAAFLDEARQRYDIPVVEVIRPAVRRALATTRNHKVGVIGTEGTIN 123 Query: 134 RTYTSNLI----HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 +L + H V+ VE + +I E + Sbjct: 124 SQAYQHLFVQANDAETPNVEAHAVACPDFVPFVERGITSGR----QILGVAEAYLAPLQA 179 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D +VL CTHYPL+ + + V + +++ A+ +L + + Sbjct: 180 AGVDTLVLGCTHYPLLTGIIQLAMGDNVTLVSSAEETAKDVLRILTERDELAPVDNEPTR 239 Query: 250 LF-LSGKPDIAMRRLMQGFG 268 LF +G P+ R + G Sbjct: 240 LFESTGDPETFARLAQRFLG 259 >gi|15673264|ref|NP_267438.1| glutamate racemase [Lactococcus lactis subsp. lactis Il1403] gi|13878595|sp|Q9CG28|MURI_LACLA RecName: Full=Glutamate racemase gi|12724258|gb|AAK05380.1|AE006360_9 glutamate racemase [Lactococcus lactis subsp. lactis Il1403] Length = 271 Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 17/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V +++ +P +Y+ D PYG + Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K + V+ACNTA + + ++ + +G + P A T++ Sbjct: 53 FTWDMVNFLLSK-DVKMIVMACNTATAMALEIVKEKL-DIPVIGVILPGASSAIQKTKTN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T A++R I S ++ ++ S VE +++ + +K + Sbjct: 111 KIGVIATQASIRSDEYHKTIARKSSAVEVYSLACPKFVSIVESN----EMESEIARKVVS 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH- 240 + GK D ++L CTHYPL+ + ++ V +D+ R LL + + Sbjct: 167 ESLVPLIGK-VDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLLNYFSING 225 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGL 269 Q R +H + + + + + Sbjct: 226 QERQPLEHRFYTTAGVNSFREIAEKWLNI 254 >gi|94989807|ref|YP_597907.1| glutamate racemase [Streptococcus pyogenes MGAS10270] gi|166231059|sp|Q1JIG0|MURI_STRPD RecName: Full=Glutamate racemase gi|94543315|gb|ABF33363.1| Glutamate racemase [Streptococcus pyogenes MGAS10270] Length = 264 Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 10/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L Sbjct: 4 RAIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLT 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + + V ACNTA + +E+++ + LG + P A T G + ++ TP T+ Sbjct: 64 Q-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 I + ++ VE ++ KK + GK Sbjct: 122 ASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-I 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INTHQTRVFDDHAL 250 D +VL CTHYPL+ + + + V +D+ R LL IN + + +H Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVEHRF 236 Query: 251 FLSGKPDIAMRRLMQGF 267 F + P+I Sbjct: 237 FTTANPEIFQEIASIWL 253 >gi|305680741|ref|ZP_07403548.1| glutamate racemase [Corynebacterium matruchotii ATCC 14266] gi|305658946|gb|EFM48446.1| glutamate racemase [Corynebacterium matruchotii ATCC 14266] Length = 288 Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 14/269 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKI N + I IFDSG+GGL V + + +P Y+ D PYG + Sbjct: 21 MKITN-------NSPIGIFDSGVGGLTVARTIMEQLPGESITYIGDTAHSPYGPLPIAEV 73 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +K + + +++++ +L VIACNTA + R + PA+++A A T++ Sbjct: 74 RKHALRIADELVERGSKML-VIACNTASAACLRDARERYDVPVIEVIHPAVRRAVATTRN 132 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G I ++ T T+ +L S I + VE + +I Sbjct: 133 GRIGVIGTSGTINSGAYQDLF-SVNPNVEITAQACPRFVDFVERGITSGR----QILGVA 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + D +VL CTHYPL+ V + V + +++ A+ L + Sbjct: 188 QAYIEPLQTAGVDTLVLGCTHYPLLSGVIQLAIGDNVTLVSSAEETAKDVLKQLSTTDML 247 Query: 241 QTR-VFDDHALFLSGKPDIAMRRLMQGFG 268 H +G P++ + + G Sbjct: 248 ADESTTPTHHFESTGDPELFSQLAKRFLG 276 >gi|251796096|ref|YP_003010827.1| glutamate racemase [Paenibacillus sp. JDR-2] gi|247543722|gb|ACT00741.1| glutamate racemase [Paenibacillus sp. JDR-2] Length = 271 Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I I DSG+GGL V +++ +P +Y D PYG + + + + ++ Sbjct: 4 QQPIAILDSGVGGLTVAREVMRQLPREKIVYFGDTARAPYGPRDPKIVTRFTREIVDYLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 +++P + VIACNTA +E+R+ + +G + P + A T +G I ++ T T Sbjct: 64 -QFRPKMIVIACNTATAFALEEIRAIV-DIPVVGVIKPGARAALGRTITGCIGVIGTEGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + H+ + + VE+ + + + I Sbjct: 122 IKSGAYEHALLEISPDVHVISEACPLFVPLVEKG----NFRSLQTYETIRSSIGHLRKFP 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250 D ++L CTHYP + V +++ ++ + ++D AR +L + + H Sbjct: 178 MDSLILGCTHYPFLADVIQEVVGPDINLISSADETAREVSDILQDQGMLSRGEILPVHQF 237 Query: 251 FLSGKPDIAMRRLMQGFG 268 F SG+P + Q G Sbjct: 238 FCSGEPQMFKSIAQQWLG 255 >gi|323489950|ref|ZP_08095171.1| glutamate racemase [Planococcus donghaensis MPA1U2] gi|323396246|gb|EGA89071.1| glutamate racemase [Planococcus donghaensis MPA1U2] Length = 267 Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ L+P Y+ D+ PYG ++ + + + Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIMKLLPNEQICYIGDNARCPYGPRPLAEVRTYTWQMANAL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + K + VIACNTA L+ P + +G + P + A + + I++L T Sbjct: 61 MKK-NIKMLVIACNTATAAALYSLQKNLP-IPVIGVIFPGARAAVKSSTTNKIAVLGTSG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S VS H+ ++ VE + + ++ + Sbjct: 119 TVKSGAYEKAVLSLVSSAHVIQLACPRFVPLVESDEYEGEFAH----RIVQETLATIAYE 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HA 249 D +L CTHYPL+ ++ V L +++ A+ L N R H Sbjct: 175 EFDTAILGCTHYPLLQGFIEEVLGDTVHVLSSAEETAKDVERYLHYKNQFANREKPPVHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 + SG I + + Sbjct: 235 FYTSGSTQIFSSIVRKWL 252 >gi|153811627|ref|ZP_01964295.1| hypothetical protein RUMOBE_02019 [Ruminococcus obeum ATCC 29174] gi|149832368|gb|EDM87453.1| hypothetical protein RUMOBE_02019 [Ruminococcus obeum ATCC 29174] Length = 273 Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 17/265 (6%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKID I +FDSG+GGL V +++ +P +Y D PYG+ + Sbjct: 1 MKID-------RDAPIGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSRDTV 53 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQ 119 + + L + Q VIACNTA D ++ + LG + A K AA T Sbjct: 54 IRYSRQIIH-FLKEQQAKAIVIACNTASAFALDAVQHE-QDIPVLGVIGAGAKVAAEETV 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + + ++ T T+ + + + + + VEE + + + Sbjct: 112 NKRVGVIGTVGTVGSGIHEAYLKKLDPEITVIGKACPLFVPLVEEGW----LHDPVTVEV 167 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 E + K D ++L CTHYPLI R++ V ++ + A + LL + N Sbjct: 168 ANRYLQELKDKDVDTLILGCTHYPLIRSTIREVMGEKVRLVNPAYETALELKNLLQKTNM 227 Query: 240 HQTRVFDD---HALFLSGKPDIAMR 261 T ++ + ++S D Sbjct: 228 LSTGQQEEEFPYRFYVSDLADEFKE 252 >gi|258511815|ref|YP_003185249.1| glutamate racemase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478541|gb|ACV58860.1| glutamate racemase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 281 Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 6/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I +FDSGIGGL V M+ +P +Y D PYG+ + +++ + + Sbjct: 4 AHRPIGVFDSGIGGLTVFHAMKRRLPHESMVYFGDRARCPYGDRDPDEVERFALEI-GRY 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ L V+ACNTA + L+ P QA +++G I ++ T T Sbjct: 63 LERLGIKLLVVACNTATAVALPRLKQELGIDVVGVIEPGASQAIEASETGRIGVIGTSVT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + V+ + VE+ ++ D ++ + R Sbjct: 123 VSSHAYAEALRVLRPDVSVVEVACPLFVPLVEQG----HVEGDAVEAVVRESLQPLLEAR 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTHYPL++ V R++ + + ++D+ A R +L D Sbjct: 179 IDTLVLGCTHYPLLMPVIRRVLGPSIRVISSADATAERVARVLAERGLEAPDHREPDACF 238 Query: 251 FLSGKPDIAMRRLMQGFG 268 +G L FG Sbjct: 239 LTTGDTASLRMALATWFG 256 >gi|83589382|ref|YP_429391.1| glutamate racemase [Moorella thermoacetica ATCC 39073] gi|83572296|gb|ABC18848.1| glutamate racemase [Moorella thermoacetica ATCC 39073] Length = 276 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 8/248 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL V +++ +P IY D PYG+ L + ++ Sbjct: 5 QPVGVFDSGVGGLTVAREITRQLPAETIIYFGDTAHVPYGSRPVDELIHFADTIVGFLIA 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + V ACNT + L+ + S+ +G + P ++ A T++G I +++T AT+ Sbjct: 65 RGA-KAIVDACNTTSAVALPYLQQKY-SIPIIGVIEPGVEAALQATKNGRIGVIATEATI 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + S + + + VE + ++ + C Sbjct: 123 ASDAHRRALLSRGKEVQVFTRACPPFVPLVEAGI----VAGPRVEGVVAECLESLLQAGI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251 D ++L CTHYP + V + L+ V +D + + R + +L + H + Sbjct: 179 DTLILGCTHYPFLAPVIQDLAGPGVTLVDPAAATVRELKSVLAAGGGLRGPHGSRAHEFY 238 Query: 252 LSGKPDIA 259 +SG P Sbjct: 239 VSGDPRSF 246 >gi|94993693|ref|YP_601791.1| glutamate racemase [Streptococcus pyogenes MGAS10750] gi|306827957|ref|ZP_07461224.1| glutamate racemase [Streptococcus pyogenes ATCC 10782] gi|166231060|sp|Q1J8B4|MURI_STRPF RecName: Full=Glutamate racemase gi|94547201|gb|ABF37247.1| Glutamate racemase [Streptococcus pyogenes MGAS10750] gi|304429876|gb|EFM32918.1| glutamate racemase [Streptococcus pyogenes ATCC 10782] Length = 264 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 104/268 (38%), Gaps = 18/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+ Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L + +L + + V ACNTA + +E+++ + LG V P A T G Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ TP T+ I + ++ VE ++ KK + Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D +VL CTHYPL+ + + + V +D+ R LL IN Sbjct: 167 DSLAPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + +H F + +I Sbjct: 226 NYHQKAVEHRFFTTANSEIFQEIASIWL 253 >gi|302872434|ref|YP_003841070.1| glutamate racemase [Caldicellulosiruptor obsidiansis OB47] gi|302575293|gb|ADL43084.1| glutamate racemase [Caldicellulosiruptor obsidiansis OB47] Length = 267 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 6/242 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V +++ LMP + +Y D PYG+ + K M +L Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNENIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K + V+ACNTA + L+ +F P K A T++ + ++ T T+ Sbjct: 64 K-NVKIVVVACNTASAYAYETLKKSFDIPIVAVIEPGAKAAVNATKNKRVGVVGTEGTIA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I S + + VEE ++ K+ +E E K D Sbjct: 123 SGSFEKKILELDSSIKVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFSEKEID 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + V +++ P V ++ + A++ +L + + F + Sbjct: 179 TLVLGCTHYPFLQDVIKKVLP-DVMLINPALETAKQVFEVLKENDMLNNSSEEPTYYFYA 237 Query: 254 GK 255 Sbjct: 238 SD 239 >gi|224476259|ref|YP_002633865.1| glutamate racemase [Staphylococcus carnosus subsp. carnosus TM300] gi|254766124|sp|B9DPT7|MURI_STACT RecName: Full=Glutamate racemase gi|222420866|emb|CAL27680.1| putative glutamate racemase [Staphylococcus carnosus subsp. carnosus TM300] Length = 266 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 103/258 (39%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG E ++K + L + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDSARCPYGPREGDEVRKFTVQLAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + D L+ P + +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALDTLKELLP-IPVIGVIEPGSRTAIMTTKNNNVMVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I + + V+ VE+ + + + I Sbjct: 119 TIKSEAYTKHIKAINPHVDVTGVACPDFVPLVEQMRYHDPVPTNIV---IHQTLKNYRTN 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 + D ++L CTHYPL+ + + AR LL N H + H Sbjct: 176 KADTVILGCTHYPLLFEPLHDYFGGSKTVISSGLETAREVSALLTFSNEHAPYTPNTKHR 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G + + Q Sbjct: 236 FFATGDTEHIEYIISQWL 253 >gi|184200646|ref|YP_001854853.1| glutamate racemase [Kocuria rhizophila DC2201] gi|183580876|dbj|BAG29347.1| glutamate racemase [Kocuria rhizophila DC2201] Length = 297 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 13/267 (4%) Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P + I +FDSG+GGL V + + +P +YV D PYG ++ + Sbjct: 8 RPGP-NPNSPIGVFDSGVGGLTVARSIIDQLPNEEILYVGDTANGPYGPLPIAQVRSNAL 66 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSG 121 + D++D L VIACNTA + + R + S+ + PA+++A A T+SG Sbjct: 67 RIMDDLVDSG-VKLLVIACNTASAAVLRDARERYTRGYSIPVTEVIQPAVRRAVATTRSG 125 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ T AT+ ++ + Q I V+ VE E+ + Sbjct: 126 RVGVIGTEATIGSRAYNDTFAA-APQLEITSVACPAFVEYVERGVTSGP----ELLSTAQ 180 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTH 240 + + D +VL CTHYPL+ V + V+ + +++ AR R LL Sbjct: 181 EYLQPLKDAQVDTLVLGCTHYPLLTAVISYVMGESVNLVSSAEETARDVYRSLLDNGLER 240 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267 + H +G P + L Q F Sbjct: 241 DPSLAPHHEFLATGDP-ASFEVLAQRF 266 >gi|126701188|ref|YP_001090085.1| glutamate racemase [Clostridium difficile 630] gi|254977188|ref|ZP_05273660.1| glutamate racemase [Clostridium difficile QCD-66c26] gi|255094517|ref|ZP_05323995.1| glutamate racemase [Clostridium difficile CIP 107932] gi|255102774|ref|ZP_05331751.1| glutamate racemase [Clostridium difficile QCD-63q42] gi|255308595|ref|ZP_05352766.1| glutamate racemase [Clostridium difficile ATCC 43255] gi|255316269|ref|ZP_05357852.1| glutamate racemase [Clostridium difficile QCD-76w55] gi|255518930|ref|ZP_05386606.1| glutamate racemase [Clostridium difficile QCD-97b34] gi|255652109|ref|ZP_05399011.1| glutamate racemase [Clostridium difficile QCD-37x79] gi|260685082|ref|YP_003216367.1| glutamate racemase [Clostridium difficile CD196] gi|260688740|ref|YP_003219874.1| glutamate racemase [Clostridium difficile R20291] gi|306521843|ref|ZP_07408190.1| glutamate racemase [Clostridium difficile QCD-32g58] gi|115252625|emb|CAJ70468.1| Glutamate racemase [Clostridium difficile] gi|260211245|emb|CBA66775.1| glutamate racemase [Clostridium difficile CD196] gi|260214757|emb|CBE07455.1| glutamate racemase [Clostridium difficile R20291] Length = 268 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL VL+++ ++P IY D PYG+ + K + L Sbjct: 3 NKPIGVFDSGLGGLTVLKEIMKILPNEDIIYFGDTARIPYGSRSKETIIKYTFQAIN-FL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 VIACNTA E + + + +G + A + A + T++ ++ I+ T T Sbjct: 62 KTKGVKAIVIACNTATARSLKEAQEKY-DIPIIGVIEAGARTAVSSTKNKIVGIIGTEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + I I + + VEE ++ + K ++ E + K Sbjct: 121 ISSKAYNLEISKIDESIEIVNKACPLFVPIVEEGWANTEVAKLTAKIYLQ----ELKEKN 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250 D +VL CTHYP++ + + ++ + A+ + +L N + T + + Sbjct: 177 IDSLVLGCTHYPILKRTIGEEVGEHIKLVNPAKETAKDLKKILEVQNIINNTEIHGTYQY 236 Query: 251 FLSGKPDIAMRRLMQGF 267 ++S P+ + Sbjct: 237 YVSDIPEKFSDIAREFL 253 >gi|4996220|dbj|BAA78374.1| D-glutamate racemase [Corynebacterium glutamicum] Length = 284 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 112/270 (41%), Gaps = 10/270 (3%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 + P I IFDSG+GGL V + + +P IY+ D PYG ++ Sbjct: 11 SMIERPVP-GADAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVR 69 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 + + + +++++ + VIACNTA + R + +PA+++A A T++G Sbjct: 70 EHAIRIADELVERG-CKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNG 128 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ T T+ +L + ++ V+ VE + +I + Sbjct: 129 KVGVIGTVGTINSGAYQDLFSA-SPSIEVNAVACPRFVDFVERGITSGR----QILNIAQ 183 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + D +VL CTHYPL+ V + V + +++ A+ +L + + Sbjct: 184 DYLEPLQAEGVDTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLA 243 Query: 242 T---RVFDDHALFLSGKPDIAMRRLMQGFG 268 ++ +G P+I + + G Sbjct: 244 DPDMHPEPSYSFESTGDPEIFAQLSRRFLG 273 >gi|116750432|ref|YP_847119.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB] gi|116750474|ref|YP_847161.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB] gi|116699496|gb|ABK18684.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB] gi|116699538|gb|ABK18726.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB] Length = 275 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 118/270 (43%), Gaps = 8/270 (2%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M D + ++I +FDSGIGGL V++ + +P IY D PYG + Sbjct: 1 MCHDMNFVKPDSNSAIGVFDSGIGGLTVVRALMERLPFESIIYFGDTARVPYGVKSVDTI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQ 119 K + +L + Q L ++ACNT + ++ + P + L + A A T+ Sbjct: 61 SKFAGEITEFLL-RQQVKLLIVACNTMAAVAREVIVGLSP-VPVLDVIDAGASSAVEATR 118 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + + ++ TPAT+ + IH + + I + + VEE + ++ Sbjct: 119 ARYVGVIGTPATINSNAYARAIHRHDAGIRIFSQACPLFVPLVEEGWLDHPVTRLTAREY 178 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + D +VL CTHYPL+ + +++ + +D+++++A R +L ++ Sbjct: 179 LR----PVTTHQIDTLVLGCTHYPLLKPLLQKVVGKDIHLVDSAEAMAERTAAVLTEMDL 234 Query: 240 -HQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 +++ D+ F+S P + G Sbjct: 235 WNRSASPPDYRFFVSDVPLRFQGIGERFLG 264 >gi|49483313|ref|YP_040537.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425201|ref|ZP_05601627.1| glutamate racemase [Staphylococcus aureus subsp. aureus 55/2053] gi|257427864|ref|ZP_05604262.1| glutamate racemase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430499|ref|ZP_05606881.1| glutamate racemase [Staphylococcus aureus subsp. aureus 68-397] gi|257433261|ref|ZP_05609619.1| glutamate racemase [Staphylococcus aureus subsp. aureus E1410] gi|257436100|ref|ZP_05612147.1| glutamate racemase [Staphylococcus aureus subsp. aureus M876] gi|258423807|ref|ZP_05686693.1| glutamate racemase [Staphylococcus aureus A9635] gi|282903699|ref|ZP_06311587.1| glutamate racemase [Staphylococcus aureus subsp. aureus C160] gi|282905467|ref|ZP_06313322.1| glutamate racemase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908441|ref|ZP_06316272.1| glutamate racemase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910725|ref|ZP_06318528.1| glutamate racemase [Staphylococcus aureus subsp. aureus WBG10049] gi|282913925|ref|ZP_06321712.1| glutamate racemase [Staphylococcus aureus subsp. aureus M899] gi|282918848|ref|ZP_06326583.1| glutamate racemase [Staphylococcus aureus subsp. aureus C427] gi|282923970|ref|ZP_06331646.1| glutamate racemase [Staphylococcus aureus subsp. aureus C101] gi|283957893|ref|ZP_06375344.1| glutamate racemase [Staphylococcus aureus subsp. aureus A017934/97] gi|293500960|ref|ZP_06666811.1| glutamate racemase [Staphylococcus aureus subsp. aureus 58-424] gi|293509917|ref|ZP_06668626.1| glutamate racemase [Staphylococcus aureus subsp. aureus M809] gi|293526504|ref|ZP_06671189.1| glutamate racemase [Staphylococcus aureus subsp. aureus M1015] gi|295427637|ref|ZP_06820269.1| glutamate racemase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591408|ref|ZP_06950046.1| glutamate racemase [Staphylococcus aureus subsp. aureus MN8] gi|56749237|sp|Q6GHT5|MURI_STAAR RecName: Full=Glutamate racemase gi|49241442|emb|CAG40126.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus MRSA252] gi|257272177|gb|EEV04309.1| glutamate racemase [Staphylococcus aureus subsp. aureus 55/2053] gi|257274705|gb|EEV06192.1| glutamate racemase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278627|gb|EEV09246.1| glutamate racemase [Staphylococcus aureus subsp. aureus 68-397] gi|257281354|gb|EEV11491.1| glutamate racemase [Staphylococcus aureus subsp. aureus E1410] gi|257284382|gb|EEV14502.1| glutamate racemase [Staphylococcus aureus subsp. aureus M876] gi|257846039|gb|EEV70067.1| glutamate racemase [Staphylococcus aureus A9635] gi|282313942|gb|EFB44334.1| glutamate racemase [Staphylococcus aureus subsp. aureus C101] gi|282316658|gb|EFB47032.1| glutamate racemase [Staphylococcus aureus subsp. aureus C427] gi|282321993|gb|EFB52317.1| glutamate racemase [Staphylococcus aureus subsp. aureus M899] gi|282325330|gb|EFB55639.1| glutamate racemase [Staphylococcus aureus subsp. aureus WBG10049] gi|282328106|gb|EFB58388.1| glutamate racemase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330759|gb|EFB60273.1| glutamate racemase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595317|gb|EFC00281.1| glutamate racemase [Staphylococcus aureus subsp. aureus C160] gi|283790042|gb|EFC28859.1| glutamate racemase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920576|gb|EFD97639.1| glutamate racemase [Staphylococcus aureus subsp. aureus M1015] gi|291095965|gb|EFE26226.1| glutamate racemase [Staphylococcus aureus subsp. aureus 58-424] gi|291467367|gb|EFF09884.1| glutamate racemase [Staphylococcus aureus subsp. aureus M809] gi|295127995|gb|EFG57629.1| glutamate racemase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576294|gb|EFH95010.1| glutamate racemase [Staphylococcus aureus subsp. aureus MN8] gi|312438474|gb|ADQ77545.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH60] gi|315193821|gb|EFU24216.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus CGS00] Length = 266 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ + I Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 +D ++L CTHYPL+ + + AR LL N H + DH Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G + + L Sbjct: 236 FFATGDTTHITNIIKEWLNLS 256 >gi|242373382|ref|ZP_04818956.1| glutamate racemase [Staphylococcus epidermidis M23864:W1] gi|242348745|gb|EES40347.1| glutamate racemase [Staphylococcus epidermidis M23864:W1] Length = 266 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 98/258 (37%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEEVKQFTTEIAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ P + +G + P + A T++ + +L T Sbjct: 61 ME-FNIKMLVIACNTATAVALEHLQKLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +++ V+ VE+ + I + Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D ++L CTHYPL+ + + AR LL N H + H Sbjct: 176 DADTVILGCTHYPLLYKPIYDYFDGTKTVISSGLETAREVSALLTFSNEHASYTEHPKHR 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G + + Sbjct: 236 FFATGDTTHIENIIAEWL 253 >gi|57866660|ref|YP_188316.1| glutamate racemase [Staphylococcus epidermidis RP62A] gi|242242450|ref|ZP_04796895.1| glutamate racemase [Staphylococcus epidermidis W23144] gi|71151977|sp|Q5HQ24|MURI_STAEQ RecName: Full=Glutamate racemase gi|57637318|gb|AAW54106.1| glutamate racemase [Staphylococcus epidermidis RP62A] gi|242234100|gb|EES36412.1| glutamate racemase [Staphylococcus epidermidis W23144] gi|319401537|gb|EFV89747.1| glutamate racemase [Staphylococcus epidermidis FRI909] Length = 267 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +KK L + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKKFTTELAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + D L++ P + +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALDYLQNILP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +++ V+ VE+ + + I + Sbjct: 119 TIKSEAYRTHIKKINPNVNVYSVACPGFVPLVEQMRYKDPTITNIV---IHQTLKQWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D ++L CTHYPL+ + + + AR LL N H + H Sbjct: 176 DADTVILGCTHYPLLYQPIYEYFSGTKTVISSGLETAREVSALLTFSNEHASYTEHPQHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G + + +K Sbjct: 236 FFATGDTTHIKNIIDEWLNMK 256 >gi|315658541|ref|ZP_07911413.1| glutamate racemase [Staphylococcus lugdunensis M23590] gi|315496870|gb|EFU85193.1| glutamate racemase [Staphylococcus lugdunensis M23590] Length = 269 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 99/264 (37%), Gaps = 7/264 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I + DSG+GGL V +++ +P Y+ D PYG +K L Sbjct: 1 MKNMNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDIARCPYGPRPGEEVKAFTTELA 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + +++ + + VIACNTA + + L+ S+ +G + P + A T++ + IL Sbjct: 61 NKLME-FDIKMLVIACNTATAVALEHLQ-HILSIPVIGVIEPGARTAIMTTKNQHVLILG 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + I + V+ VE+ I I Sbjct: 119 TEGTIKSEAYRHHIKRINPNVEVTGVACPGFVPLVEQMRYNDPTITSII---IHQTLKHW 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246 D ++L CTHYPL+ + + AR LL N H + Sbjct: 176 RNSIADTVILGCTHYPLLYQPLNDYFGGDKTVISSGLETAREVSALLTFSNEHASYTAQP 235 Query: 247 DHALFLSGKPDIAMRRLMQGFGLK 270 H F +G + + +K Sbjct: 236 QHRFFSTGDTTHITNIIAEWLHMK 259 >gi|75907689|ref|YP_321985.1| glutamate racemase [Anabaena variabilis ATCC 29413] gi|123610062|sp|Q3MD46|MURI_ANAVT RecName: Full=Glutamate racemase gi|75701414|gb|ABA21090.1| glutamate racemase [Anabaena variabilis ATCC 29413] Length = 292 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 102/262 (38%), Gaps = 9/262 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++ + I +FDSG+GGL VL+++ +P IY D PYG + + + Sbjct: 17 QEPQRAPIGVFDSGVGGLTVLRQIYRQLPNESVIYFGDTARLPYGIRSQAEILTFVRDIL 76 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 D + + + V+ACNT+ L D +R + LG + P K A Q I ++S Sbjct: 77 -DWMQQQHVKMVVMACNTSSALALDIVREEY-DFPILGVILPGAKAAVQ--QGKRIGVIS 132 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TPAT + I + V +E+ +I++ + Sbjct: 133 TPATAKSNAYRQAIWEIDPNVEVWQVGCPEFVPLIEQN----RIQDPYTTEVARAYLEPL 188 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + D +V CTHYPL+ V R L P V +D + + L + T Sbjct: 189 IQQDIDTLVYGCTHYPLLAPVLRSLLPPQVKIIDPAVHVVTACTQELDILGLSNTHPPLP 248 Query: 248 HALFLSGKPDIAMRRLMQGFGL 269 +SG P + + G Sbjct: 249 TRFAVSGCPQQFSQSGVNWLGY 270 >gi|319441880|ref|ZP_07991036.1| glutamate racemase [Corynebacterium variabile DSM 44702] Length = 277 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 13/263 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL V + + +PE IY+ D PYG+ +++ + D++ Sbjct: 7 NSPIGVFDSGVGGLTVARAIVDQLPEESMIYIGDTANSPYGDKPLAVVRELATAIADDLV 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D+ + V+ACNTA + R +P +PA+++A + T++G + ++ T AT+ Sbjct: 67 DRG-CKMIVVACNTASAAFLRDARERYPVPIIEVILPAVRRAVSVTRNGRVGVIGTHATI 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +L + + VE +I E + + Sbjct: 126 TSGAYQDLFRA-NPNVEVFAQDCPQFVPFVERGIT----TGRQILGLAEAYLEPLKDEGV 180 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----- 247 D +VL CTHYPL+ V + + V +++++ + L R D Sbjct: 181 DTLVLGCTHYPLLTGVLQLVMGDDVTLVNSAEETMKTVYRTLNEQGILADRSPGDGAGEQ 240 Query: 248 --HALFLSGKPDIAMRRLMQGFG 268 H +G P + G Sbjct: 241 PVHTFESTGDPQRFAHLASRFLG 263 >gi|295108801|emb|CBL22754.1| glutamate racemase [Ruminococcus obeum A2-162] Length = 272 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 103/255 (40%), Gaps = 10/255 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + +FDSG+GGL V +++ +P +Y D PYG+ + + + Sbjct: 3 DKNAPVGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKDTVIRYSSQIVH- 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129 L + VIACNTA + ++ + LG + A + AA T++ + ++ T Sbjct: 62 FLREQNVKAIVIACNTASAFALEAVQDKL-DIPVLGVIEAGARVAAEETKNKRVGVIGTV 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ + + + + + + VEE + + + E + Sbjct: 121 GTVGSGIHESYLKRLDPEITVIGKACPLFVPLVEEGW----LHDPVTVEVASRYLQELKD 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFD 246 ++ D ++L CTHYPLI +++ V ++ + A + LL +++ T + Sbjct: 177 EQVDTLILGCTHYPLIRSTIQEVMGEKVRLVNPAYETALELKSLLTKMDLLSTGEQQAEF 236 Query: 247 DHALFLSGKPDIAMR 261 + ++S D Sbjct: 237 PYRFYVSDLADEFKE 251 >gi|307150996|ref|YP_003886380.1| glutamate racemase [Cyanothece sp. PCC 7822] gi|306981224|gb|ADN13105.1| glutamate racemase [Cyanothece sp. PCC 7822] Length = 278 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 105/258 (40%), Gaps = 9/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I IFDSG+GGL VL+++ +P +Y AD PYG + + + + D + Sbjct: 6 RSPIGIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSAGEILEFVREIM-DWM 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 Q + ++ACNT+ L D +R F + LG + P + A + I +++TPAT Sbjct: 65 TAQQVKMVIMACNTSSALALDAVRDEF-DVPVLGVILPGARAAVQ--KGKRIGVIATPAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 I V + V +E+ +I E K+ + + Sbjct: 122 AASNAYRQAIEEIVPTAQVWQVGCPEFVPLIEQN----RIYEPLTKEVAKQYLKPLLQLK 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +V CTHY + +FRQ+ P V +D + + A L + Sbjct: 178 IDTLVYGCTHYRHLEPLFRQILPSSVRLVDPARYVVSAAEKELELLGLKSNFPSVPTRFC 237 Query: 252 LSGKPDIAMRRLMQGFGL 269 +SG P+ Q G Sbjct: 238 VSGNPETFAVLSRQWLGY 255 >gi|149924170|ref|ZP_01912547.1| glutamate racemase [Plesiocystis pacifica SIR-1] gi|149814971|gb|EDM74531.1| glutamate racemase [Plesiocystis pacifica SIR-1] Length = 276 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 3/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL VL+ +R +P FIY+ D PYG + + ++ Sbjct: 7 DAPIGVFDSGVGGLTVLRALRRRLPNERFIYLGDTARLPYGTKSPETVARYAEKAAGVLV 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ L VIACNTA + L F + +G + P A A T+S + ++ T T Sbjct: 67 ERG-IKLLVIACNTASAVAVSRLAERFAPVPVIGVIEPGAWAACAATRSDRVLVIGTEGT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I + V+ + + EE I E ++ + E +R Sbjct: 126 INGGAYQRAIARRRPAIVVRSVACPLFVALAEEGWVRGPIPEAIARRYLAVELSGNEDER 185 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250 D +VL CTH+P++ V +++ V +D++++ A L R + D Sbjct: 186 VDTLVLGCTHFPVLRGVLQEVCGPEVSLVDSAETTATSVARALEREGLAAGQGGGDSLHF 245 Query: 251 FLSGKPDIAMR 261 + PD R Sbjct: 246 LATDAPDRFAR 256 >gi|255657512|ref|ZP_05402921.1| glutamate racemase [Clostridium difficile QCD-23m63] gi|296452816|ref|ZP_06894503.1| glutamate racemase [Clostridium difficile NAP08] gi|296879932|ref|ZP_06903904.1| glutamate racemase [Clostridium difficile NAP07] gi|296258364|gb|EFH05272.1| glutamate racemase [Clostridium difficile NAP08] gi|296429046|gb|EFH14921.1| glutamate racemase [Clostridium difficile NAP07] Length = 268 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL VL+++ ++P IY D PYG+ + K + L Sbjct: 3 NKPIGVFDSGLGGLTVLKEIMKILPNEDIIYFGDTARIPYGSRSKETIIKYTFQAIN-FL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 VIACNTA E + + + +G + A + A + T++ ++ I+ T T Sbjct: 62 KTKGVKAIVIACNTATARSLKEAQEKY-DIPIIGVIEAGARTAVSSTKNKIVGIIGTEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + I I + + VEE ++ + K ++ E + K Sbjct: 121 ISSKAYNLEISKIDESIEIVNKACPLFVPIVEEGWANTEVAKLTAKIYLQ----ELKEKN 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250 D +VL CTHYP++ + + ++ + A+ + +L N + T + + Sbjct: 177 IDSLVLGCTHYPILKRTIGEEVGEHIKLVNPAKETAKDLKKVLEVKNIINNTEIHGTYQY 236 Query: 251 FLSGKPDIAMRRLMQGF 267 ++S P+ + Sbjct: 237 YVSDIPEKFTDIAREFL 253 >gi|291546372|emb|CBL19480.1| glutamate racemase [Ruminococcus sp. SR1/5] Length = 273 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 17/263 (6%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ID + +FDSGIGGL V +++ +P +Y D PYG+ + Sbjct: 1 MNID-------RNAPVGVFDSGIGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSRETV 53 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQ 119 + + L + + V+ACNTA D ++ + LG + A K AA T+ Sbjct: 54 IRYSRQIIH-FLQEQKVKAIVVACNTASAFALDAVKDEL-DIPILGVIEAGAKVAAQETR 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + + I+ T T+ ++ + + + + + VEE + E+ ++ Sbjct: 112 NKRVGIIGTVGTVGSGIHASYLKELDPEITVIGKACPLFVPLVEEGWYHDPVTEEVARR- 170 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 E + + D ++L CTHYPL+ R++ V ++ + A + LL R++ Sbjct: 171 ---YLKELQEQEIDTLILGCTHYPLLRSTIRKIMGEEVCLVNPAYETALELKKLLSRLDL 227 Query: 240 HQTRVFDD---HALFLSGKPDIA 259 V + + ++S + Sbjct: 228 SSNEVAQEEFPYRFYVSDLAEKF 250 >gi|194449428|ref|YP_002048128.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194407732|gb|ACF67951.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] Length = 260 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 137/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPNLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S L E G + +E+++ + E D +V Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + ++Q +G ++ Sbjct: 239 GAEQLLPVLQRYGFET 254 >gi|151567723|pdb|2JFQ|A Chain A, Crystal Structure Of Staphylococcus Aureus Glutamate Racemase In Complex With D-Glutamate gi|151567724|pdb|2JFQ|B Chain B, Crystal Structure Of Staphylococcus Aureus Glutamate Racemase In Complex With D-Glutamate Length = 286 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 7/266 (2%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + I + DSG+GGL V +++ +P Y+ D PYG +K+ + Sbjct: 16 PRGSHMNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVE 75 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125 + +++ + + VIACNTA + + L+ T S++ +G + P + A T++ + + Sbjct: 76 IARKLME-FDIKMLVIACNTATAVALEYLQKTL-SISVIGVIEPGARTAIMTTRNQNVLV 133 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L T T++ I +H V+ VE+ + I Sbjct: 134 LGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLK 190 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV- 244 +D ++L CTHYPL+ + + AR LL N H + Sbjct: 191 RWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTE 250 Query: 245 FDDHALFLSGKPDIAMRRLMQGFGLK 270 DH F +G + + L Sbjct: 251 HPDHRFFATGDTTHITNIIKEWLNLS 276 >gi|314933347|ref|ZP_07840712.1| glutamate racemase [Staphylococcus caprae C87] gi|313653497|gb|EFS17254.1| glutamate racemase [Staphylococcus caprae C87] Length = 266 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +++ + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGDEVRQFTTEIAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ P + +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQRLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +++ V+ VE+ + I + Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D ++L CTHYPL+ + + AR LL N H + H Sbjct: 176 DADTVILGCTHYPLLYKPIYDYFDGEKTVISSGLETAREVSALLTFSNEHASYTEHPKHR 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G + + Sbjct: 236 FFATGDTTHIKNIIAEWL 253 >gi|330502036|ref|YP_004378905.1| glutamate racemase [Pseudomonas mendocina NK-01] gi|328916322|gb|AEB57153.1| glutamate racemase [Pseudomonas mendocina NK-01] Length = 271 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 5/271 (1%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M + I +FDSG+GGL VL+++R L+P +YVAD PYG + Sbjct: 1 MILPAAFAAMPSNAPIGVFDSGVGGLSVLREIRQLLPNETLLYVADSGHVPYGEKSPEYI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 ++R + + ++ L V+ACNTA ELR + + +G PA+K AAA T+S Sbjct: 61 RERCV-VITEHLRAQGAKALVLACNTATAAAAGELRERYADLPIVGMEPAVKPAAAATRS 119 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T TL+ + L+ + + + L +E +++ ++ + Sbjct: 120 GVVGVLATTGTLKSARFAALLDRFANDVRVITQPCPGLVECIEAG----ELQAPATRELL 175 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 +G + D ++L CTHYP + + +L P V +D ++AR+ + LL + + Sbjct: 176 QGYVAPLLAEGCDTLILGCTHYPFLRPLLGELVPPSVTLIDTGAAVARQLQRLLTQHDLL 235 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 T + SG+ R L G K+ Sbjct: 236 ATTPAQATRYWSSGEVSQLCRVLPILLGEKA 266 >gi|319957379|ref|YP_004168642.1| glutamate racemase [Nitratifractor salsuginis DSM 16511] gi|319419783|gb|ADV46893.1| glutamate racemase [Nitratifractor salsuginis DSM 16511] Length = 278 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 13/259 (5%) Query: 8 CEKKLQNS------ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 + K+QN I IFDSG+GGL VL+ + +P +Y+AD PYG ++ Sbjct: 1 MKSKIQNPKSKIVRIGIFDSGLGGLTVLRPIMQALPGAEILYLADTAHAPYGEKSREEIR 60 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 + + + ++ V+ACNTA + LR FP + +G P IK A ++S Sbjct: 61 SYSLGIAEYFIREHDVDALVVACNTATSAAIATLRERFPDLPIVGTEPGIKPAVRASRSA 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKE 179 + IL+TPATL L ++ + + L R+E +++ E ++ Sbjct: 121 KVGILATPATLAGEKYQALAERLCTEHEVQLFEQACPGLVERIERG----EVESPECRRM 176 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 +EG D IVL CTHYPL R++ PV ++ ++IARR LL + Sbjct: 177 LEGWLAPMREAGVDTIVLGCTHYPLAASAIREVMGTPVTLIETGEAIARRLLSLLGECES 236 Query: 240 HQTRVFDDHALFLSGKPDI 258 ++ L+ +G D Sbjct: 237 -KSNGEPVLKLYATGPIDT 254 >gi|125624017|ref|YP_001032500.1| glutamate racemase [Lactococcus lactis subsp. cremoris MG1363] gi|166231039|sp|A2RKH0|MURI_LACLM RecName: Full=Glutamate racemase gi|124492825|emb|CAL97780.1| MurI protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070787|gb|ADJ60187.1| glutamate racemase [Lactococcus lactis subsp. cremoris NZ9000] Length = 271 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 19/270 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V +++ +P +Y+ D PYG + Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K + V+ACNTA + + ++ + +G + P A T++ Sbjct: 53 FTWDMVNFLLSK-NVKMIVMACNTATAMALEIVKEEL-DIPVIGVILPGASSAIQKTKTN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T A++R I S + ++ S VE +++ + K+ + Sbjct: 111 KIGVIATQASIRSDEYHKTIARKSSAIEVLSLACPKFVSIVESN----EMESEIAKRVVS 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239 GK D ++L CTHYPL+ + ++ V +D+ R LL IN Sbjct: 167 ESLAPLVGK-IDTLILGCTHYPLLRPLIQETMGKEVRLIDSGAEAVRDISVLLNYFEINA 225 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFGL 269 H+ + F H + + + + + Sbjct: 226 HERKEF-QHCFYTTAGVNSFREIAEKWLNI 254 >gi|123440538|ref|YP_001004532.1| glutamate racemase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166231066|sp|A1JI42|MURI_YERE8 RecName: Full=Glutamate racemase gi|122087499|emb|CAL10280.1| putative glutamate racemase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 287 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 88/271 (32%), Positives = 142/271 (52%), Gaps = 9/271 (3%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 K D P L IFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + Sbjct: 19 KADTAPRPTAL-----IFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIV 73 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +R++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G Sbjct: 74 ERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNG 132 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++ +L+T T+ +YT +LI + + C I L+ S L E G + ++ +KK + Sbjct: 133 VVGLLATRGTVHASYTQDLIERFATDCKIELLGSSELVELAETKLHGGVVPKEALKKILH 192 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ Sbjct: 193 PWLAMREP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVI 250 Query: 242 TRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271 + ++ A ++ D A+ ++QG+G S Sbjct: 251 SSDEENIAYCMALNADTDALLPVLQGYGFPS 281 >gi|332800387|ref|YP_004461886.1| glutamate racemase [Tepidanaerobacter sp. Re1] gi|332698122|gb|AEE92579.1| Glutamate racemase [Tepidanaerobacter sp. Re1] Length = 269 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 6/250 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL V ++ L+P+ + +Y D PYG + + +L Sbjct: 5 NKPIGVFDSGIGGLTVAGEIMKLLPKENIVYFGDTARVPYGPKSSEVVTQFAFEGLRFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K L VIACNT D+L ++ P P + A A T++ ++ ++ T T+ Sbjct: 65 GK-DVKLIVIACNTVSATCLDKLCASSPVPVIGVIEPGARAAVAATENQVVGVIGTERTI 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH+ Q IH + + VEE + K +E + + Sbjct: 124 KSCAYERAIHALNKQIKIHSKACPLFVPLVEEGWLENEAAFYTAKTYLES----LKKQGI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251 D +VLACTHYPL+ ++ V +D++ AR + +L N + + F Sbjct: 180 DTLVLACTHYPLLKLTLGKVMGETVRLVDSAWETAREVQRILIDKNLKRQDNSPAFYQYF 239 Query: 252 LSGKPDIAMR 261 +S P+ ++ Sbjct: 240 VSDNPEKFVQ 249 >gi|168262957|ref|ZP_02684930.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194446431|ref|YP_002043393.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|238912271|ref|ZP_04656108.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194405094|gb|ACF65316.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|205348286|gb|EDZ34917.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 260 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S L E G + +E+++ + E D +V Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDTNIAYCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + ++Q +G ++ Sbjct: 239 GAEQLLPVLQRYGFET 254 >gi|218438768|ref|YP_002377097.1| glutamate racemase [Cyanothece sp. PCC 7424] gi|226722981|sp|B7KCC4|MURI_CYAP7 RecName: Full=Glutamate racemase gi|218171496|gb|ACK70229.1| glutamate racemase [Cyanothece sp. PCC 7424] Length = 278 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 9/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I IFDSG+GGL VL+++ +P +Y AD PYG + + + + D + Sbjct: 6 RSPIGIFDSGVGGLTVLRELYRRLPNESILYFADTARLPYGTRSAGEILQFVREIM-DWM 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 Q + ++ACNT+ L + +R F ++ LG + P + A + I +++TPAT Sbjct: 65 TSQQVKMVIMACNTSSALALEAIRDEF-ALPVLGVILPGARAAVQ--KGKRIGVIATPAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 I S + V +E+ ++ E K+ + Sbjct: 122 AASNAYRQAIEEIDSTAQVWQVGCPDFVPLIEQN----RLYEPYTKEVAKQYLNPLLQVN 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +V CTHY + +FRQ+ P + +D + + A L + T Sbjct: 178 IDTLVYGCTHYRHLEPLFRQILPPSISLVDPAQYVVSAAEKELELLGLKSTLPCLPTRFC 237 Query: 252 LSGKPDIAMRRLMQGFGL 269 +SG P+ Q G Sbjct: 238 VSGNPETFANLSRQWLGY 255 >gi|225375887|ref|ZP_03753108.1| hypothetical protein ROSEINA2194_01523 [Roseburia inulinivorans DSM 16841] gi|225212322|gb|EEG94676.1| hypothetical protein ROSEINA2194_01523 [Roseburia inulinivorans DSM 16841] Length = 290 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 7/264 (2%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 N ++ +Q I +FDSG+GG+ VL+++ LMP +FI+ D PYG ++K Sbjct: 27 NRNMDE-MQRPIGVFDSGVGGISVLRELVALMPNENFIFYGDSKNAPYGTKTLEEVRKLT 85 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLI 123 + + + L V+ACNTA + LR + + +G PA+K A + ++ + Sbjct: 86 LADAEYLRSRNVKAL-VVACNTATSAAIHILREKYQKEIPVIGIEPALKPAVSVKENSRV 144 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++TP TLR NL+ + Q I + L VE ++ + ++ ++ Sbjct: 145 LVMATPMTLREKKFHNLMQKFQDQAEIISLPCPGLVEFVERG----ELSGEALEHFLKNL 200 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 F + ++ D +VL CTHYPL+ +++ V D AR L + Sbjct: 201 FAPYQERKVDAVVLGCTHYPLVRKTIQKVLGSGVAVFDGGAGTARETLHKLKEYSLVSDA 260 Query: 244 VFDDHALFLSGKPDIAMRRLMQGF 267 V F + D AM L + Sbjct: 261 VTPGTVQFYNSTEDQAMIELSKYL 284 >gi|329766985|ref|ZP_08258513.1| glutamate racemase [Gemella haemolysans M341] gi|328837710|gb|EGF87335.1| glutamate racemase [Gemella haemolysans M341] Length = 264 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 102/258 (39%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + N+I +FDSG+GGL V +++ +P Y D PYG+ + K + Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTREEIIKYTDRAVKYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +DK + V+ACNTA + L+ + + +G V P ++A T++ + +L T Sbjct: 61 IDKG-VKMVVLACNTATAAALNYLQDKY-DIPIIGVVQPGARRAIQATENNKVLVLGTKF 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T + I + S + + +E + +D KK I Sbjct: 119 TAKSKVYDIEIENINSDIQVVDKACPAFVPFIES---EGNVDKDATKKIIHETLENTRNL 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249 D +VL CTHYP++ + + + + AR +L HQ R DH Sbjct: 176 GVDTVVLGCTHYPILKKDIEEYYGNNIKVISSGREAAREVSSVLGYAKLHQKRFNKKDHE 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 ++S + + Sbjct: 236 FYISEASENFNNIASKWL 253 >gi|121602574|ref|YP_989115.1| glutamate racemase [Bartonella bacilliformis KC583] gi|166231026|sp|A1UT12|MURI_BARBK RecName: Full=Glutamate racemase gi|120614751|gb|ABM45352.1| glutamate racemase [Bartonella bacilliformis KC583] Length = 271 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 129/260 (49%), Positives = 173/260 (66%), Gaps = 2/260 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + ++ FDSGIGGL VL++ R L+PE F+YVADD GFPYG WE+ LK R++ +F+++L Sbjct: 3 EKPVIFFDSGIGGLTVLKEARILIPELQFVYVADDAGFPYGAWEEDVLKGRILKVFTNLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y P L VIACNTA TL+ +LR FP + F+G VPAIK AAA T+SGLIS+L+TP T+ Sbjct: 63 KLYTPALCVIACNTASTLMISDLRQEFPHIPFVGTVPAIKSAAAQTKSGLISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI S+ +QCH+ LV S LA+ E Y G I +E++ EI CF+EK GK T Sbjct: 123 KRAYTHELISSFANQCHVELVGSKKLATFAENYLRGYPIDYEELRHEILPCFVEKNGKYT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHAL 250 DVIVLACTHYP ++ +F + + W V+W+D + +IAR R LL N + ++AL Sbjct: 183 DVIVLACTHYPFLISLFHKQALWSVNWIDPAKAIARHTRSLLLETMKNKSSKKNIKNYAL 242 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 F S D RL+Q F L Sbjct: 243 FTSQNIDFVTERLLQRFNLN 262 >gi|119509564|ref|ZP_01628711.1| glutamate racemase [Nodularia spumigena CCY9414] gi|119465753|gb|EAW46643.1| glutamate racemase [Nodularia spumigena CCY9414] Length = 297 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 10/268 (3%) Query: 3 IDNYPCEKKLQN-SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 D++ +K+ Q I +FDSG+GGL VL+++ +P IY D PYG + Sbjct: 20 FDDHLADKEPQRAPIGVFDSGVGGLTVLRQLYRHLPNESIIYFGDTARLPYGIRTQVEIL 79 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 + + + + + + + + ++ACNT+ L + +R F S+ +G + P K A Q Sbjct: 80 QYVREILNWM-QQQRVKMVIMACNTSSALALEIVRREF-SLPIIGVILPGAKAAVQ--QG 135 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +++TPAT + + I + + VS +E+ + + + Sbjct: 136 KRIGVIATPATAKSNAYRHAILEMDANVQVWQVSCPEFVPLIEQNRINDPYTTEVARSYL 195 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E + D +V CTHYP + + R L P V +D + + L + Sbjct: 196 E----PLIQQEIDTLVYGCTHYPHLAPILRSLLPSQVKLVDPAVHVVAACTQELELLGLT 251 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFG 268 T +SG P + +Q G Sbjct: 252 NTHPPLPTRFAVSGCPQKFAKSGVQWLG 279 >gi|27467761|ref|NP_764398.1| glutamate racemase [Staphylococcus epidermidis ATCC 12228] gi|251810598|ref|ZP_04825071.1| glutamate racemase [Staphylococcus epidermidis BCM-HMP0060] gi|282876402|ref|ZP_06285269.1| glutamate racemase [Staphylococcus epidermidis SK135] gi|293366868|ref|ZP_06613544.1| glutamate racemase [Staphylococcus epidermidis M23864:W2(grey)] gi|29839516|sp|Q8CPL0|MURI_STAES RecName: Full=Glutamate racemase gi|27315305|gb|AAO04440.1|AE016746_230 glutamate racemase [Staphylococcus epidermidis ATCC 12228] gi|251805758|gb|EES58415.1| glutamate racemase [Staphylococcus epidermidis BCM-HMP0060] gi|281295427|gb|EFA87954.1| glutamate racemase [Staphylococcus epidermidis SK135] gi|291319169|gb|EFE59539.1| glutamate racemase [Staphylococcus epidermidis M23864:W2(grey)] gi|329730002|gb|EGG66393.1| glutamate racemase [Staphylococcus epidermidis VCU144] gi|329734459|gb|EGG70772.1| glutamate racemase [Staphylococcus epidermidis VCU045] gi|329736265|gb|EGG72537.1| glutamate racemase [Staphylococcus epidermidis VCU028] Length = 267 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +KK L + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKKFTTELAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L++ P + +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALNYLQNILP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +++ V+ VE+ + + I + Sbjct: 119 TIKSEAYRTHIKKINPNVNVYSVACPGFVPLVEQMRYKDPTITNIV---IHQTLKQWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D ++L CTHYPL+ + + + AR LL N H + H Sbjct: 176 DADTVILGCTHYPLLYQPIYEYFSGTKTVISSGLETAREVSALLTFSNEHASYTEHPQHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G + + +K Sbjct: 236 FFATGDTTHIKNIIDEWLNMK 256 >gi|161617274|ref|YP_001591239.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197262992|ref|ZP_03163066.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198241754|ref|YP_002218058.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386743|ref|ZP_03213355.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|161366638|gb|ABX70406.1| hypothetical protein SPAB_05116 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197241247|gb|EDY23867.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936270|gb|ACH73603.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603841|gb|EDZ02386.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|312915247|dbj|BAJ39221.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225423|gb|EFX50481.1| Glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 260 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S L E G + +E+++ + E D +V Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + ++Q +G ++ Sbjct: 239 GAEQLLPVLQRYGFET 254 >gi|225021576|ref|ZP_03710768.1| hypothetical protein CORMATOL_01597 [Corynebacterium matruchotii ATCC 33806] gi|224945567|gb|EEG26776.1| hypothetical protein CORMATOL_01597 [Corynebacterium matruchotii ATCC 33806] Length = 288 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 14/269 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKI N + I IFDSG+GGL V + + +P Y+ D PYG + Sbjct: 21 MKITN-------NSPIGIFDSGVGGLTVARTIMEQLPGESITYIGDTAHSPYGPLPIAEV 73 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +K + + +++++ +L VIACNTA + R + PA+++A A T++ Sbjct: 74 RKHALRIADELVERGSKML-VIACNTASAACLRDARERYDVPVIEVIHPAVRRAVATTRN 132 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G I ++ T T+ +L S I + VE + +I Sbjct: 133 GRIGVIGTSGTINSGAYQDLF-SVNPNVEITAQACPRFVDFVERGITSGR----QILGVA 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + D +VL CTHYPL+ V + V + +++ A+ L + Sbjct: 188 QAYIEPLQTAGVDTLVLGCTHYPLLSGVIQLAIGDNVTLVSSAEETAKDVLKQLSTTDML 247 Query: 241 QTR-VFDDHALFLSGKPDIAMRRLMQGFG 268 H +G P++ + + G Sbjct: 248 ADESTTPIHHFESTGDPELFSQLAKRFLG 276 >gi|19553709|ref|NP_601711.1| glutamate racemase [Corynebacterium glutamicum ATCC 13032] gi|62391349|ref|YP_226751.1| glutamate racemase [Corynebacterium glutamicum ATCC 13032] gi|21325280|dbj|BAB99902.1| Glutamate racemase [Corynebacterium glutamicum ATCC 13032] gi|41326690|emb|CAF21172.1| GLUTAMATE RACEMASE [Corynebacterium glutamicum ATCC 13032] Length = 284 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 112/270 (41%), Gaps = 10/270 (3%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 + P I IFDSG+GGL V + + +P IY+ D PYG ++ Sbjct: 11 SMIERPVP-GADAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVR 69 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 + + + +++++ + VIACNTA + R + +PA+++A A T++G Sbjct: 70 EHAIRIADELVERG-CKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNG 128 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ T T+ +L + ++ V+ VE + +I + Sbjct: 129 KVGVIGTVGTINSGAYQDLFSA-SPSIVVNAVACPRFVDFVERGITSGR----QILNIAQ 183 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + D +VL CTHYPL+ V + V + +++ A+ +L + + Sbjct: 184 DYLEPLQAEGVDTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLA 243 Query: 242 T---RVFDDHALFLSGKPDIAMRRLMQGFG 268 ++ +G P+I + + G Sbjct: 244 DPDMHPEPSYSFESTGDPEIFAQLSRRFLG 273 >gi|317050042|ref|YP_004117690.1| glutamate racemase [Pantoea sp. At-9b] gi|316951659|gb|ADU71134.1| glutamate racemase [Pantoea sp. At-9b] Length = 284 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 137/262 (52%), Gaps = 4/262 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 L+ ++L+FDSG+GGL V +++R L+P H++Y D+ GFPYG + + R++ + Sbjct: 18 SDLRPTVLVFDSGVGGLSVYEEIRQLLPNLHYLYAFDNEGFPYGEKTETYIVDRVVSIVE 77 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 I + L VIACN+A T+ LR+ F +G VPAIK AA T++G++ +L+T Sbjct: 78 AITQHFPLALVVIACNSASTVSLPALRAKF-DFPVVGVVPAIKPAARLTRNGVVGLLATR 136 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++R YT L+ + +C I ++ S L E G ++ D++++ ++ KE Sbjct: 137 GTVKRPYTHELVAQFARECQIKMLGSAELVELAEAKLHGEEVLLDDVRRVVQPWLRMKEP 196 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D +VL CTH+PL+ + + P +D+ +IARR LL + A Sbjct: 197 --PDTVVLGCTHFPLLRDELQLVLPEGTRLVDSGAAIARRTAWLLEHAAPVALSDAPNMA 254 Query: 250 LFLSGKPDI-AMRRLMQGFGLK 270 ++ + ++Q +G Sbjct: 255 FCTRMDEEVLQLSPVLQRYGFP 276 >gi|161505378|ref|YP_001572490.1| glutamate racemase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|194472599|ref|ZP_03078583.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738355|ref|YP_002117043.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|213051820|ref|ZP_03344698.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427064|ref|ZP_03359814.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213646315|ref|ZP_03376368.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224585944|ref|YP_002639743.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|289830049|ref|ZP_06547498.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|16504616|emb|CAD09499.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139435|gb|AAO71002.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|160866725|gb|ABX23348.1| hypothetical protein SARI_03532 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|194458963|gb|EDX47802.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713857|gb|ACF93078.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|224470472|gb|ACN48302.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322613115|gb|EFY10059.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619257|gb|EFY16140.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322626123|gb|EFY22935.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626417|gb|EFY23223.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632469|gb|EFY29217.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635048|gb|EFY31769.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642749|gb|EFY39339.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646426|gb|EFY42937.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648559|gb|EFY45009.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654820|gb|EFY51138.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657287|gb|EFY53567.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662226|gb|EFY58441.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669773|gb|EFY65917.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672032|gb|EFY68147.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675753|gb|EFY71825.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681831|gb|EFY77857.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322683974|gb|EFY79983.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193245|gb|EFZ78460.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197603|gb|EFZ82736.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202193|gb|EFZ87248.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207172|gb|EFZ92124.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211374|gb|EFZ96215.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218581|gb|EGA03289.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220937|gb|EGA05369.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226066|gb|EGA10284.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231593|gb|EGA15705.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236901|gb|EGA20972.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239421|gb|EGA23470.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243986|gb|EGA27997.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249349|gb|EGA33266.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250408|gb|EGA34291.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258862|gb|EGA42514.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260886|gb|EGA44486.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265226|gb|EGA48723.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270448|gb|EGA53894.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 260 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S L E G + +E+++ + E D +V Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + ++Q +G ++ Sbjct: 239 GAEQLLPVLQRYGFET 254 >gi|323699601|ref|ZP_08111513.1| glutamate racemase [Desulfovibrio sp. ND132] gi|323459533|gb|EGB15398.1| glutamate racemase [Desulfovibrio desulfuricans ND132] Length = 279 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 7/267 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + + I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + Sbjct: 1 MKNQAKLPIGMFDSGVGGLTVLKALRERMPCEDVLYLGDTARLPYGTKSPQTVTRYGVQC 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 ++++ + L V+ACNTA + D LR P + +G V P + A T + ++++ Sbjct: 61 GAELIKRG-IKLLVVACNTASAVALDALREANPGVPVIGVVDPGARAACQATTNQAVAVI 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T +T+ IH+ Q I + + EE + E + ++ F Sbjct: 120 ATESTIAGGAYQRAIHAINPQARILGHPCPLFVALAEEGWTDGHVPEAVAARYLDPIFKP 179 Query: 187 KEGKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 G D +VL CTH+PL+ R + P +D++ + A L R+ ++ Sbjct: 180 ASGTEHPVIPDTLVLGCTHFPLLAPAIRNVVPEHTTIVDSAATTAETVYRELDRLGLNRP 239 Query: 243 RVF-DDHALFLSGKPDIAMRRLMQGFG 268 + R + G Sbjct: 240 ENGCGSTRYLTTDDVPRFARTGSRFLG 266 >gi|281491802|ref|YP_003353782.1| glutamate racemase [Lactococcus lactis subsp. lactis KF147] gi|281375516|gb|ADA65026.1| Glutamate racemase [Lactococcus lactis subsp. lactis KF147] Length = 271 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 17/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V +++ +P +Y+ D PYG + Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K + V+ACNTA + + ++ + +G + P A T++ Sbjct: 53 FTWDMVNFLLSK-DVKMIVMACNTATAMALEIVKEKL-DIPVIGVILPGASSAIQKTKTN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T A++R I S ++ ++ S VE +++ + +K + Sbjct: 111 KIGVIATQASIRSDEYHKTIARKSSAVEVYSLACQKFVSIVESN----EMESEIARKVVS 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH- 240 + GK D ++L CTHYPL+ + ++ V +D+ R LL + + Sbjct: 167 ESLVPLIGK-VDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLLNYFSING 225 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGL 269 Q R +H + + + + + Sbjct: 226 QERQPLEHRFYTTAGVNSFREIAEKWLNI 254 >gi|145296506|ref|YP_001139327.1| glutamate racemase [Corynebacterium glutamicum R] gi|140846426|dbj|BAF55425.1| hypothetical protein [Corynebacterium glutamicum R] Length = 284 Score = 297 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 112/270 (41%), Gaps = 10/270 (3%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 + P I IFDSG+GGL V + + +P IY+ D PYG ++ Sbjct: 11 SMIERPLP-GADAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVR 69 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 + + + +++++ + VIACNTA + R + +PA+++A A T++G Sbjct: 70 EHAIRIADELVERG-CKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNG 128 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ T T+ +L + ++ V+ VE + +I + Sbjct: 129 KVGVIGTVGTINSGAYQDLFSA-SPSIVVNAVACPRFVDFVERGITSGR----QILNIAQ 183 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + D +VL CTHYPL+ V + V + +++ A+ +L + + Sbjct: 184 DYLEPLQAEGVDTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLA 243 Query: 242 T---RVFDDHALFLSGKPDIAMRRLMQGFG 268 ++ +G P+I + + G Sbjct: 244 DPDMHPEPSYSFESTGDPEIFAQLSRRFLG 273 >gi|292486642|ref|YP_003529512.1| glutamate racemase [Erwinia amylovora CFBP1430] gi|292897879|ref|YP_003537248.1| glutamate racemase [Erwinia amylovora ATCC 49946] gi|291197727|emb|CBJ44822.1| glutamate racemase [Erwinia amylovora ATCC 49946] gi|291552059|emb|CBA19096.1| Glutamate racemase [Erwinia amylovora CFBP1430] gi|312170706|emb|CBX78969.1| Glutamate racemase [Erwinia amylovora ATCC BAA-2158] Length = 283 Score = 297 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 84/269 (31%), Positives = 148/269 (55%), Gaps = 6/269 (2%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D P + ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R Sbjct: 14 DATPSAPR--PTVLIFDSGVGGLSVYSEIRALLPDLHYLYAFDNVAFPYGEKSEEFIVER 71 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + + + +Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ Sbjct: 72 VLAIVTAVTRRYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIV 130 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T++R YT L+ + +C ++ S L E G + +E+++ ++ Sbjct: 131 GLLATRGTVKRPYTHELVARFAGECRTEMLGSGELVELAEAKLHGQPVAIEEVRRILQPW 190 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + + D +VL CTH+PLI +Q+ P +D+ +IARR LL + Sbjct: 191 L--RMSEPPDTVVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPVAVS 248 Query: 244 VFDDHALFL-SGKPDIAMRRLMQGFGLKS 271 D+ AL L + + + + ++Q +G K+ Sbjct: 249 TDDNMALCLDNTEQAVQLIPVLQRYGFKT 277 >gi|82750757|ref|YP_416498.1| glutamate racemase [Staphylococcus aureus RF122] gi|123549008|sp|Q2YXC5|MURI_STAAB RecName: Full=Glutamate racemase gi|82656288|emb|CAI80702.1| glutamate racemase [Staphylococcus aureus RF122] Length = 266 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 M-GFDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ + I Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 +D ++L CTHYPL+ + + AR LL N H + DH Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G + + L Sbjct: 236 FFATGDTTHITNIIKEWLNLS 256 >gi|300721344|ref|YP_003710615.1| glutamate racemase [Xenorhabdus nematophila ATCC 19061] gi|297627832|emb|CBJ88367.1| glutamate racemase [Xenorhabdus nematophila ATCC 19061] Length = 287 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 134/262 (51%), Gaps = 4/262 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + +IL+FDSG+GGL V +++R L+P+ H+IY D+ FPYG + R++ + Sbjct: 21 NKTARPTILVFDSGVGGLSVYKEIRKLLPDLHYIYAFDNEAFPYGEKTADVIIDRVVKVV 80 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I K+ + VIACNTA T+ LR F S +G VPAIK AA + + ++ +L+T Sbjct: 81 DAIQKKHPLAVVVIACNTASTVSLPVLRERF-SFPVVGVVPAIKPAAKLSCNRIVGLLAT 139 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ R YT LI + + C +H + S L E G + DE++K ++ KE Sbjct: 140 RATVNRGYTKELITRFATDCQVHSIGSAELVELAERKLHGKDVPLDELEKVLKPWLRMKE 199 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D ++L CTH+PLI Q+ P +D+ +IARR L+ D+ Sbjct: 200 P--PDTVILGCTHFPLIAEELSQVLPDGTRLIDSGAAIARRTAWLIKNRADLFLTTVDNL 257 Query: 249 ALFLSGKPD-IAMRRLMQGFGL 269 A D A+ ++ +G Sbjct: 258 AYCTKLDADSEALSPVLYEYGF 279 >gi|293391663|ref|ZP_06635997.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952197|gb|EFE02316.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 275 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 82/260 (31%), Positives = 134/260 (51%), Gaps = 5/260 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +++IL FDSG+GGL V ++++ L+P +H++Y D+ FPY + + +R + + I Sbjct: 6 KSTILFFDSGVGGLSVYREVKQLLPNHHYLYCFDNAYFPYSEKPEEKIIERTLKICQRID 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y L VIACNTA T++ LR F S+ +G VPAIK AA + + I +L+T T+ Sbjct: 66 QMYPLDLIVIACNTASTVVLPSLREHF-SIPIVGTVPAIKPAAEQSMTKHIGLLATKGTV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R Y S+LI Y + C + + S L E G I +EIK E+ Sbjct: 125 KRKYLSDLIDKYAADCRVEKIGSTKLVELAERKLHGYPIDLNEIKSEVLTWV---TMSDL 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTH+PLI +Q P + ++D+ ++A+R LL + ++ Sbjct: 182 DCVVLGCTHFPLIKSEIQQCLPQVIYFIDSGAAVAKRVESLLSDVKVRSKNQTNNQVFCT 241 Query: 253 SG-KPDIAMRRLMQGFGLKS 271 P+ + L+Q G ++ Sbjct: 242 KMISPEDGLPNLIQSLGFET 261 >gi|312135723|ref|YP_004003061.1| glutamate racemase [Caldicellulosiruptor owensensis OL] gi|311775774|gb|ADQ05261.1| glutamate racemase [Caldicellulosiruptor owensensis OL] Length = 267 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 6/242 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K + V+ACNTA + L++ F P + A T++ I ++ T T+ Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKKIGVIGTEGTIA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I S + + VEE ++ K+ +E E K D Sbjct: 123 SGSFEKKILELDSSIKVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFIEKEID 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + V +++ P V ++ + A+R +L + + + F + Sbjct: 179 TLVLGCTHYPFLQDVIKKVLP-DVILINPARETAKRVFEVLKENDILNSSCEEPTYYFYA 237 Query: 254 GK 255 Sbjct: 238 SD 239 >gi|170729028|ref|YP_001763054.1| glutamate racemase [Shewanella woodyi ATCC 51908] gi|229486277|sp|B1KN02|MURI_SHEWM RecName: Full=Glutamate racemase gi|169814375|gb|ACA88959.1| glutamate racemase [Shewanella woodyi ATCC 51908] Length = 266 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 138/265 (52%), Gaps = 11/265 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSG+GGL +L ++R ++P+ ++ Y+ D+ PYG E+ L L + Sbjct: 1 MSGPILVFDSGVGGLSILDEIRRVLPDQNYCYLFDNARLPYGELEEQELIDGCEALITAT 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + L VIACNTA TL+ LR ++ +G VPAIK AA Y+Q+ I +L+TP T Sbjct: 61 VAQLGASLVVIACNTASTLVLPVLREAL-TIPVVGVVPAIKPAALYSQAKHIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R+YT +LI + + C + L S L E A G +I ++ EI + Sbjct: 120 IKRSYTHSLIQEFAANCQVELYGSSELVLLAERKASGKQI----LQGEIAQLLSPIKVSG 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--- 248 D +VL CTH+P++ +Q V LD+ ++A R L+ +T R H Sbjct: 176 IDTLVLGCTHFPILKDEIQQYLGDGVLLLDSGKAVAARVSTLIKEESTLNKRQRKGHSKE 235 Query: 249 --ALFLSGKPDIAMRRLMQGFGLKS 271 AL+ S + +++L+ FG + Sbjct: 236 MIALYTS-EVGEGLKKLLAEFGFST 259 >gi|302206779|gb|ADL11121.1| Glutamate racemase [Corynebacterium pseudotuberculosis C231] gi|302331332|gb|ADL21526.1| Glutamate racemase [Corynebacterium pseudotuberculosis 1002] gi|308277024|gb|ADO26923.1| Glutamate racemase [Corynebacterium pseudotuberculosis I19] Length = 297 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 11/262 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + I IFDSG+GGL V + + +P+ IY+ D PYG+ +++ M + + Sbjct: 31 DASSPIGIFDSGVGGLTVARAIMEQLPQESVIYIGDTANSPYGSKPIAQVRELSMRIGDE 90 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 ++ + + VIACNTA + +LR + S+ +G + PA+++A A T++G I +L T Sbjct: 91 LVARG-CKMIVIACNTATSAALRDLRERY-SIPVVGVILPAVRRAVAATRNGKIGVLGTQ 148 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ L + ++ + S VE + +I +G + Sbjct: 149 GTIASGAYQELFAA-SPGVEVYAQACPSFVSFVERGITSGR----QILGVAQGYTEGLQS 203 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---FD 246 D +VL CTHYPL+ V + V + +S+ + +L R + Sbjct: 204 AGVDTLVLGCTHYPLLTGVIQLAVGDNVTLISSSEECVKDVLKVLSRNDMLAEATADKPP 263 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 + +G P + + M+ G Sbjct: 264 SRSFESTGDPALFEQLAMRFLG 285 >gi|74317540|ref|YP_315280.1| glutamate racemase [Thiobacillus denitrificans ATCC 25259] gi|74057035|gb|AAZ97475.1| glutamate racemase [Thiobacillus denitrificans ATCC 25259] Length = 265 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 9/262 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + I +FDSGIGGL V++ + +P + +Y D PYG + + Sbjct: 1 MSTNAHSPIGVFDSGIGGLTVVRALMERLPYENIVYFGDTARVPYGVKSVETIAHFTTQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +L+K L VIACNT + ++ P + L + A AA+ I ++ Sbjct: 61 AQFLLEK-DVKLLVIACNTMAAVAAQVVKDLSP-VPVLDVIDAG--AASARGGKKIGVIG 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP T+ + IH Y IH + + VEE ++ + + Sbjct: 117 TPTTINSNAYARAIHDYAPDSRIHSQACPLFVPLVEEGWLDNEVT----RLTAQDYMKPL 172 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246 + D +VL CTHYPL+ + R++ V +D+++++A + +L + Sbjct: 173 LAEHIDTLVLGCTHYPLLKPLLREVVGDGVALVDSAEAMAEQVAAVLAEKSLANPGPAQP 232 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 + +++ P + G Sbjct: 233 RYDFYVTDVPLRFQTIGERFLG 254 >gi|319405660|emb|CBI79283.1| Glutamate racemase [Bartonella sp. AR 15-3] Length = 270 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 127/259 (49%), Positives = 177/259 (68%), Gaps = 1/259 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L FDSGIGGL +L+++R + EY FIYVADD GFPYG WE+ L+ R++ +F+ +L Sbjct: 3 EQPLLFFDSGIGGLTILREVRLFVSEYQFIYVADDAGFPYGIWEEEMLRHRILKIFTYLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Y P L VIACNTA TL+ ++LR FP++ F+G VPAIK AA T+SG+IS+L+TP T+ Sbjct: 63 ELYNPALCVIACNTASTLMIEDLRREFPNIHFVGTVPAIKLAAEQTKSGVISVLATPGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI+S+ QC++ LV S LA E Y G I +E++ EI CFIEK GK T Sbjct: 123 KRAYTHELINSFAGQCYVQLVGSEKLAGFAENYLRGYPINYEELRHEILPCFIEKNGKLT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251 D+IVLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP +I + + D LF Sbjct: 183 DIIVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPMKIQNKNMKEYTDFTLF 242 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S + L+Q F LK Sbjct: 243 TSQNISPSTENLLQKFHLK 261 >gi|319407232|emb|CBI80871.1| Glutamate racemase [Bartonella sp. 1-1C] Length = 270 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 129/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + S+L FDSGIGGL +L+++R + EY FIY+AD+ GFPYG WE+ LK+R++ +F+ +L Sbjct: 3 EQSLLFFDSGIGGLTILREVRLFVSEYQFIYIADNEGFPYGIWEEEILKRRILKIFTYLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Y P L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SG+IS+L+TP+T+ Sbjct: 63 ELYNPALCVIACNTASTLMIKDLRRAFPNIRFVGTVPAIKLAAEQTKSGVISVLATPSTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI+S+ QCH+ LV S LA E Y G I +E+ EI CFIEK GK T Sbjct: 123 RCAYTHELINSFAGQCHVQLVGSEKLAGFAESYLHGYPINHEELHHEILPCFIEKNGKLT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251 D +VLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP I + D ALF Sbjct: 183 DTVVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPINIQNKNMKKHTDFALF 242 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S A L+Q F LK Sbjct: 243 TSQNISPATENLLQKFHLK 261 >gi|229159921|ref|ZP_04287928.1| Glutamate racemase [Bacillus cereus R309803] gi|228623660|gb|EEK80479.1| Glutamate racemase [Bacillus cereus R309803] Length = 276 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 107/261 (40%), Gaps = 7/261 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + Sbjct: 5 NENSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFI-FEMVE 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L ++ V+ACNT +L+ S+ +G + P + A T+ G I ++ T Sbjct: 64 FLKQFPLKALVVACNTGAAAALTDLQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTV 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ +H + +H + LA+ VE I + ++++ + Sbjct: 123 GTIKSNMYEKALHELDTYLEVHSHACPTLATVVENQLEDI----AYVTQQVKQALLPLTK 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 + D ++L CTHYPL+ ++ V + +++ A +L ++ H Sbjct: 179 EDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDKLNPKHR 238 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G + G + Sbjct: 239 FFTTGSVASFEHIAERWLGYQ 259 >gi|197248641|ref|YP_002149052.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197212344|gb|ACH49741.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 260 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 4/255 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S L E G + +E+++ + E D +V Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238 Query: 257 D-IAMRRLMQGFGLK 270 + ++Q +G + Sbjct: 239 GAEQLLPVLQRYGFE 253 >gi|297539329|ref|YP_003675098.1| glutamate racemase [Methylotenera sp. 301] gi|297258676|gb|ADI30521.1| glutamate racemase [Methylotenera sp. 301] Length = 283 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 14/276 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 +K + P K ++ I +FDSG+GG+ VL+ ++ L+P +YVAD PYGN + Sbjct: 6 IKSNETPVNKPIEKPIAVFDSGVGGISVLKHIQALLPNEQLLYVADSKYAPYGNKTAAEI 65 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + R + ++ K L V+ACNTA D LR + S+ +G PA+K AA +++ Sbjct: 66 QARCFEIAEFLMAKDAKAL-VVACNTATAAAIDSLRERY-SLPIIGMEPAVKPAAEASRN 123 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G+I +L+T TL+ + L+ SY + + + L +E ++ D K I Sbjct: 124 GIIGVLATTGTLKSAQFAGLLESYGRNVKVVTQACVGLVECIERG----ELDADNTKMLI 179 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + D IVL CTHYP + H+ Q+ V +D ++A++ + L Sbjct: 180 QQYCAPLLAEGADTIVLGCTHYPFVRHLIEQVVGANVALIDTGAAVAKQLKRQLEEKGLL 239 Query: 241 QTRVFD--------DHALFLSGKPDIAMRRLMQGFG 268 R + + + + A + Q +G Sbjct: 240 SNRTAEADAQFSKSKVQFWTNSENPNAKVVIEQLWG 275 >gi|218245461|ref|YP_002370832.1| glutamate racemase [Cyanothece sp. PCC 8801] gi|226722982|sp|B7JWN0|MURI_CYAP8 RecName: Full=Glutamate racemase gi|218165939|gb|ACK64676.1| glutamate racemase [Cyanothece sp. PCC 8801] Length = 281 Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 9/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+++ +P+ +Y AD PYGN + + + + + Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESMLYFADTARLPYGNRSGAEILQYVREILVWM- 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + ++ACNT+ L D +RS F + LG + P + A Q I ++STPAT Sbjct: 65 SQQNVKMVIMACNTSSALALDIVRSEF-NFPILGVILPGARAAVK--QGQRIGVISTPAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I + + V +E +I + K+ + Sbjct: 122 AKSNAYRQAIQEINPKAQVWQVGCAEFVPLIEAN----RIHDPYTKQVAWKYLAPLLAQN 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +V CTHY + +F+++ P V+ +D ++ + A+ L + Sbjct: 178 IDTLVYGCTHYRHLSPIFQEIIPPTVNLIDPANFVVAAAKKELELMGLRHNEPPLPTRFA 237 Query: 252 LSGKPDIAMRRLMQGFGL 269 +SG P + Q G Sbjct: 238 VSGCPQTFSQISQQWLGY 255 >gi|223043787|ref|ZP_03613830.1| glutamate racemase [Staphylococcus capitis SK14] gi|222442884|gb|EEE48986.1| glutamate racemase [Staphylococcus capitis SK14] Length = 266 Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 99/258 (38%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGDEVKQFTTEIAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L++ P + +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQTLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +++ V+ VE+ + I + Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D ++L CTHYPL+ + + AR LL N H + H Sbjct: 176 DADTVILGCTHYPLLYKPIYDYFDGEKTVISSGLETAREVSALLTFSNEHASYTEHPKHR 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G + + Sbjct: 236 FFATGDTTHIKNIIAEWL 253 >gi|298243458|ref|ZP_06967265.1| glutamate racemase [Ktedonobacter racemifer DSM 44963] gi|297556512|gb|EFH90376.1| glutamate racemase [Ktedonobacter racemifer DSM 44963] Length = 308 Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 10/265 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + I ++DSG GGL +L ++R ++P F+Y D PYG + + + Sbjct: 39 RPYAPIGVYDSGAGGLTILTELRKILPHEDFLYYGDTRHCPYGVRSEQEIIELAKQASCF 98 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L++ L V+ACNTA + LR +FP + F+G VPA+K AA+ T+ G I + +T Sbjct: 99 LLERG-VKLIVVACNTASQAALEALRLSFPDVPFVGVVPAVKPAASLTRKGRIGVAATNQ 157 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + Y LI + + ++ L + VE+ +++ E++ + Sbjct: 158 AAKSAYLQQLIEDFATGVEVYAQGCSELVTLVEKG----QLQGPEVEATLRQSLHPLLQH 213 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-----HQTRVF 245 DV+VL CTH+P + R + V +D+ +IARR R LL + + Sbjct: 214 DIDVLVLGCTHFPALREAIRHIVGPGVQVIDSGAAIARRTRFLLEQAGIAHPIDQASPEQ 273 Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270 ++ SG Q G Sbjct: 274 GLLQVWCSGDAHTFTTTASQVLGYP 298 >gi|323483118|ref|ZP_08088510.1| hypothetical protein HMPREF9474_00259 [Clostridium symbiosum WAL-14163] gi|323691441|ref|ZP_08105713.1| glutamate racemase [Clostridium symbiosum WAL-14673] gi|323403538|gb|EGA95844.1| hypothetical protein HMPREF9474_00259 [Clostridium symbiosum WAL-14163] gi|323504487|gb|EGB20277.1| glutamate racemase [Clostridium symbiosum WAL-14673] Length = 275 Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 14/256 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V++++ MP+ +Y D PYGN + + + + Sbjct: 4 NAPIGVFDSGVGGLTVMREIMRQMPDERIVYFGDTARVPYGNKSKETVIRYSQQIIRFLQ 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-KQAAAYTQSGLISILSTPAT 131 K + VIACNTA + + + + +G + A + A T++G I I+ T AT Sbjct: 64 TK-EVKAIVIACNTASACALEAVEKSL-DIPIIGVISAGSRAAVEATRNGKIGIIGTEAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R S + + + VEE + ++ +GK Sbjct: 122 IRSGVYSEEMKQLRGDIEVTGKPCPLFVPLVEEGLLHDSVTDE----IASRYLACLKGKY 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-------V 244 D +V+ CTHYPL+ F++L V ++ + A + LL + Sbjct: 178 IDTLVMGCTHYPLLRSTFKRLMGDDVTLVNPAYETAVELKGLLKEKGMTRGAKSEGVEDT 237 Query: 245 FDDHALFLSGKPDIAM 260 + + F+S + Sbjct: 238 REQYQFFVSDLAEKFT 253 >gi|213965871|ref|ZP_03394062.1| glutamate racemase [Corynebacterium amycolatum SK46] gi|213951449|gb|EEB62840.1| glutamate racemase [Corynebacterium amycolatum SK46] Length = 288 Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 9/258 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V + + +P +Y+ D PYG +++ + +++ Sbjct: 25 APIGIFDSGVGGLTVARAIMDQLPHESIMYIGDTANGPYGPLRIAEVRQHAEAIADELVA 84 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + VIACNTA + R +P +PA+++A + T++G + ++ T AT+R Sbjct: 85 RG-CKMIVIACNTASAAFLRDARERYPVPVVEVILPAVRRAVSTTRNGKVGVIGTAATIR 143 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +L + V + V VE + +I EG + D Sbjct: 144 SRAYQDLFDA-VPGVDVSAVDCPRFVDFVERGITSGR----QILGLAEGYLAPLQADGVD 198 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFDDHAL 250 +VL CTHYPL+ V + V + +++ ++ +L + + ++ Sbjct: 199 TLVLGCTHYPLLSGVIQLAMGEDVALVSSAEETSKDVLRILTKTDMLADPESNPNPVRTF 258 Query: 251 FLSGKPDIAMRRLMQGFG 268 +G P + + G Sbjct: 259 ESTGDPQVFASLAKRFLG 276 >gi|283770211|ref|ZP_06343103.1| glutamate racemase [Staphylococcus aureus subsp. aureus H19] gi|283460358|gb|EFC07448.1| glutamate racemase [Staphylococcus aureus subsp. aureus H19] Length = 266 Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ + I Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 +D ++L CTHYPL+ + + AR LL N H + DH Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFDGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G + + L Sbjct: 236 FFATGDTTHITNIIKEWLNLS 256 >gi|111220958|ref|YP_711752.1| glutamate racemase [Frankia alni ACN14a] gi|111148490|emb|CAJ60161.1| Glutamate racemase [Frankia alni ACN14a] Length = 306 Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL V + + +P +Y+ D PYG +++ + ++D Sbjct: 4 APVGVFDSGVGGLTVARAILDQLPHEPLVYLGDTGRAPYGPRPIAEVRRYALECLDRLVD 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA + R + +PA ++A A T+SG + ++ T AT+ Sbjct: 64 EG-VKLLVIACNTASAACLRDARERYSVPVVEVIMPATRRAVAATRSGRVGVIGTVATIG 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + + V+ VE + ++ E + D Sbjct: 123 SRAYDDAFTA-AAGVDLTGVACPAFVDFVERGITSGR----QLLGLTEAYLAPLQEADVD 177 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALF 251 ++L CTHYPL+ V + V + +++ A+ +L R + H Sbjct: 178 TVILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLARDGLFRDPDLPPPSHRFL 237 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P + R + G Sbjct: 238 TTGDPTLFTRVGRRFLG 254 >gi|126656938|ref|ZP_01728116.1| glutamate racemase [Cyanothece sp. CCY0110] gi|126621776|gb|EAZ92485.1| glutamate racemase [Cyanothece sp. CCY0110] Length = 281 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 9/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+++ +P+ +Y AD PYGN E + + + + + + Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGNREASEILQFVREILAWM- 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + ++ACNT+ L + +R F + LG + P K A Q I ++STPAT Sbjct: 65 TGQNVKMVIMACNTSSALALEAVRQEF-DLPILGVILPGAKAAVK--QGKRIGVISTPAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I + + V +E+ +I + K+ + Sbjct: 122 AKSQAYRQAIQEINPEAQVWQVGCPQFVPLIEQN----RIWDVYTKQVAQEYLSPLLAHD 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +V CTHY + + + + P + +D + + + A+ L + + Sbjct: 178 IDTLVYGCTHYRHLEALIKTIIPGTIKLIDPASYVVQAAKKELELMGLSKISPASPTRFA 237 Query: 252 LSGKPDIAMRRLMQGFGL 269 +SG + R Q G Sbjct: 238 VSGCSESFSRLSQQWLGY 255 >gi|300859076|ref|YP_003784059.1| glutamate racemase [Corynebacterium pseudotuberculosis FRC41] gi|300686530|gb|ADK29452.1| Glutamate racemase [Corynebacterium pseudotuberculosis FRC41] Length = 297 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 11/262 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + I IFDSG+GGL V + + +P+ IY+ D PYG+ +++ M + + Sbjct: 31 DASSPIGIFDSGVGGLTVARAIMEQLPQESVIYIGDTANSPYGSKPIAQVRELSMRIGDE 90 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 ++ + + VIACNTA + +LR + S+ +G + PA+++A A T++G I +L T Sbjct: 91 LVARG-CKMIVIACNTATSAALRDLRERY-SIPVVGVILPAVRRAVAATRNGKIGVLGTQ 148 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ L + ++ + S VE + +I +G + Sbjct: 149 GTIASGAYQELFAA-SPGVEVYAQACPSFVSFVERGITSGR----QILGVTQGYTEGLQS 203 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---FD 246 D +VL CTHYPL+ V + V + +S+ + +L R + Sbjct: 204 AGVDTLVLGCTHYPLLTGVIQLAVGDNVTLISSSEECVKDVLKVLSRNDMLAEATADKPP 263 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 + +G P + + M+ G Sbjct: 264 SRSFESTGDPALFEQLAMRFLG 285 >gi|225575569|ref|ZP_03784179.1| hypothetical protein RUMHYD_03661 [Blautia hydrogenotrophica DSM 10507] gi|225037202|gb|EEG47448.1| hypothetical protein RUMHYD_03661 [Blautia hydrogenotrophica DSM 10507] Length = 273 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 10/253 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + +FDSGIGGL V +++ +P +Y D PYG+ + + + L Sbjct: 6 EAPVGVFDSGIGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKDTVLRYSRQII-RFL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + V+ACNTA E++ ++ +G + A + AA T + + ++ T T Sbjct: 65 ETENVKAIVVACNTASAFALSEIQKEM-NLPIIGVIEAGARVAAETTMNKKVGVIGTEGT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + S + ++ + VEE + E+ E E K Sbjct: 124 IHSGIHERWLKSLDQEITVYGKPCPLFVPLVEEGWLKDPVTEE----IAERYLRELLEKE 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---H 248 D ++L CTHYPL+ + +++ V ++ + A + LL + N T + + Sbjct: 180 VDTLILGCTHYPLLRSLIQKVVGPEVKLVNPAYETALELKKLLSQENLLSTGRGQEEFPY 239 Query: 249 ALFLSGKPDIAMR 261 ++S + + Sbjct: 240 RFYVSDLAEKFRK 252 >gi|21903447|sp|Q9XDZ7|MURI_CORGL RecName: Full=Glutamate racemase Length = 273 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 112/269 (41%), Gaps = 10/269 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + P I IFDSG+GGL V + + +P IY+ D PYG +++ Sbjct: 1 MIERPVP-GADAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVRE 59 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + +++++ + VIACNTA + R + +PA+++A A T++G Sbjct: 60 HAIRIADELVERG-CKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGK 118 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + ++ T T+ +L + ++ V+ VE + +I + Sbjct: 119 VGVIGTVGTINSGAYQDLFSA-SPSIVVNAVACPRFVDFVERGITSGR----QILNIAQD 173 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + + D +VL CTHYPL+ V + V + +++ A+ +L + + Sbjct: 174 YLEPLQAEGVDTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLAD 233 Query: 243 ---RVFDDHALFLSGKPDIAMRRLMQGFG 268 ++ +G P+I + + G Sbjct: 234 PDMHPEPSYSFESTGDPEIFAQLSRRFLG 262 >gi|84494378|ref|ZP_00993497.1| glutamate racemase [Janibacter sp. HTCC2649] gi|84383871|gb|EAP99751.1| glutamate racemase [Janibacter sp. HTCC2649] Length = 274 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 8/260 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I IFDSG GGL V + + +P Y+ D PYG + + + Sbjct: 2 PDSPIGIFDSGYGGLTVARAVLDQLPHESVAYLGDTARTPYGPRPIAETRAFALECLDRL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + VIACNTA + + R + PA+++A T++G I ++ST T Sbjct: 62 V-NHGVKALVIACNTASAAVLHDARERYDVPVVEVIRPAVRRAVGATRTGRIGVISTLGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + VE G +E++ + + Sbjct: 121 HQSRAYLDAFAA-APHLTVTSEPCPRFVDFVESGVTGG----EELRTVAREYLAPLQEQD 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHA 249 D ++L CTHYPL+ V + V + +++ A+ +L + + +H Sbjct: 176 VDTLILGCTHYPLLAGVISYVMGPDVTLVSSAEETAKELYRVLADADLLRPDHLPAPEHG 235 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 +G P+ R ++ GL Sbjct: 236 FTTTGDPEEFRRLALRFLGL 255 >gi|320539067|ref|ZP_08038738.1| glutamate racemase [Serratia symbiotica str. Tucson] gi|320030705|gb|EFW12713.1| glutamate racemase [Serratia symbiotica str. Tucson] Length = 287 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 143/261 (54%), Gaps = 4/261 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ++L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S + Sbjct: 24 PRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYTFDNVAFPYGEKSEEFIVERVLEITSAV 83 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ V+ +IACNTA T+ LR F S +G VPAIK AA +T +G++ +L+T T Sbjct: 84 QQRHPMVMVIIACNTASTISLSALRERF-SFPVVGVVPAIKPAARFTANGIVGLLATRGT 142 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R+YT LI + + C I L+ S L E G + +KK + K + Sbjct: 143 VQRSYTHELIARFATDCKIELLGSSELVELAEAKLHGETVPLVTLKKILHPWL--KMSEP 200 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PL+ + P +D+ +IARR L+ + D+ A Sbjct: 201 PDTVVLGCTHFPLLAEELTLVLPEGTRLVDSGAAIARRTAWLISTQENLLSTQEDNLAYC 260 Query: 252 LSGKPDI-AMRRLMQGFGLKS 271 ++ + A+ ++Q +G K+ Sbjct: 261 MALDENTDALLPILQRYGFKT 281 >gi|126652650|ref|ZP_01724811.1| glutamate racemase [Bacillus sp. B14905] gi|126590499|gb|EAZ84617.1| glutamate racemase [Bacillus sp. B14905] Length = 265 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG ++ + Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIMKRLPNETIYYIGDTARCPYGPRSRQEVRNFTWQ-MAKA 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130 L+K + VIACNTA + + L+ P LG + A + A T+ + +L+T Sbjct: 60 LEKMNVKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + HI ++ VE + K I + + Sbjct: 119 TIKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKGEFA----TKLIAEGLKPLKNQ 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249 + D ++L CTHYP++ + V+ L +++ A+ + +L T H Sbjct: 175 QFDTVILGCTHYPILQKQIEAVVGDEVNVLSSAEETAKDVQEMLAYNGTLANANTVPAHK 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 235 FFATGSVPIFRSIAENWL 252 >gi|282891233|ref|ZP_06299736.1| hypothetical protein pah_c048o068 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498926|gb|EFB41242.1| hypothetical protein pah_c048o068 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 280 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 8/257 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I +FDSGIGGL V++ + L+P +Y D FPYGN + + + ++ Sbjct: 10 NNPIGMFDSGIGGLTVMRAVMQLLPYESVLYFGDTAHFPYGNNAAETIIQYSLANAHFLM 69 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ L VIACNTA L+ F + + + P+I+ A A TQSG I++L T T Sbjct: 70 EQ-DIKLLVIACNTASAFAFSTLQDQF-LIPIIDVISPSIEAAIAQTQSGSIAVLGTKGT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R I + Q + ++ +LA VEE ++ + ++ + Sbjct: 128 IRSGVYKQKILDLMPQARVVSLACPLLAPLVEEQW----LEHPATRLIVQEYLQPLKKSD 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250 D ++L CTHYPL+ + + V +D++ + A + +L + H Sbjct: 184 VDTLILGCTHYPLLKSLIEEEMEGQVKIIDSASACALKVEEILGNQQLQSLKEKTPHFRY 243 Query: 251 FLSGKPDIAMRRLMQGF 267 ++S P+ + Q Sbjct: 244 YVSDDPERFQQAGEQFL 260 >gi|311281559|ref|YP_003943790.1| glutamate racemase [Enterobacter cloacae SCF1] gi|308750754|gb|ADO50506.1| glutamate racemase [Enterobacter cloacae SCF1] Length = 283 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 80/265 (30%), Positives = 139/265 (52%), Gaps = 6/265 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + Sbjct: 17 PSDPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSESFIVERVVEIV 76 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T Sbjct: 77 TAVQARYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLAT 135 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R YT LI + ++C I ++ S L E G + +E+++ + E Sbjct: 136 RGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMPE 195 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D +VL CTH+PL+ + P +D+ +IARR LL + Sbjct: 196 P--PDTVVLGCTHFPLLQEELLAVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANI 253 Query: 249 ALF--LSGKPDIAMRRLMQGFGLKS 271 A L+ + + +++ +G ++ Sbjct: 254 AFCMALTAETEQLF-PVLRRYGFET 277 >gi|189485683|ref|YP_001956624.1| glutamate racemase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287642|dbj|BAG14163.1| glutamate racemase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 275 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 113/257 (43%), Gaps = 9/257 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG GGL V+ + ++P IY D PYG+ + K + S ++ Sbjct: 12 NHPIGIFDSGFGGLTVMSAITKMLPLESLIYFGDTAHVPYGSKSKDIVIKYSKEITSFLM 71 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + L VIACNTA L+ T + +G + P K A +++ I I+ T T Sbjct: 72 -RCKVKLIVIACNTASAFALSILQKTLK-VPVIGVIEPGSKAAVYASKNKKIGIIGTEGT 129 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I+ S+ ++ + + VEE +I + +KK IE K+ Sbjct: 130 INSKSYLREINRI-SKSKVYQQACPLFVPLVEEGWSSGEITDSIVKKYIEPLL----NKK 184 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250 D +VL CTHYPL+ + + V ++D++ ++++ + +L + Sbjct: 185 IDTLVLGCTHYPLLRETLEKNAGGNVVFIDSAKAVSQEVKNILKKTCILADVKGKKFLKF 244 Query: 251 FLSGKPDIAMRRLMQGF 267 ++S P+ + F Sbjct: 245 YVSDNPEKFQTIGSRFF 261 >gi|154484251|ref|ZP_02026699.1| hypothetical protein EUBVEN_01963 [Eubacterium ventriosum ATCC 27560] gi|149734728|gb|EDM50645.1| hypothetical protein EUBVEN_01963 [Eubacterium ventriosum ATCC 27560] Length = 270 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 102/255 (40%), Gaps = 8/255 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +I +FDSG+GGL V +++ +PE Y D PYG+ + + + Sbjct: 1 MNDKNAAIGVFDSGVGGLTVAREIIRQLPEESITYFGDTARVPYGSKSKDTIIRYSRQII 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L V+ACNTA D + + +G V P K A T++ I I+ Sbjct: 61 -RFLKTKNVKAIVVACNTASAFALDTIEKEI-DIPIIGVVKPGAKSAVESTKNKRIGIIG 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + IHS + + + + VEE + ++ + +E Sbjct: 119 TEGTIKSELYTQYIHSIDPEITVVGKACPLFVPLVEEGMLHDSVTDEVASRYLES----M 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246 + + D ++L CTHYPL+ ++ V+ ++ + A LL + + Sbjct: 175 KEENIDSLILGCTHYPLLRSTVGKIMGPEVNLVNPAYETAISLDGLLRQNGIRADKDAKP 234 Query: 247 DHALFLSGKPDIAMR 261 ++ ++S + Sbjct: 235 EYEFYVSDAEEKFKE 249 >gi|295092631|emb|CBK78738.1| glutamate racemase [Clostridium cf. saccharolyticum K10] Length = 271 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 10/251 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V +++ MPE +Y D PYG + + + L Sbjct: 4 NAPIGVFDSGVGGLTVAREIMRQMPEEKLVYFGDTARVPYGTKSQETVIRYSRQII-RFL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + VIACNTA + + + +G + A K A T++ I I+ T AT Sbjct: 63 RTKEVKAIVIACNTATACALETV-EKDLDIPIIGVIHAGAKAAVEATKNRKIGIIGTEAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + L+ + + VEE + ++ + K Sbjct: 122 IRSGVYTELMKQMNPAIEVTGKPCPLFVPLVEEGLLHDSVTDE----IASRYLASLKEKY 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDH 248 D +V+ CTHYPL+ +L V ++ + AR + LL + + Sbjct: 178 IDTLVMGCTHYPLLRSTLARLMGEEVTLINPAYETARELKSLLGEKELTCIPGEAGGEKY 237 Query: 249 ALFLSGKPDIA 259 F+S + Sbjct: 238 QFFVSDMAERF 248 >gi|67921667|ref|ZP_00515185.1| Glutamate racemase [Crocosphaera watsonii WH 8501] gi|67856779|gb|EAM52020.1| Glutamate racemase [Crocosphaera watsonii WH 8501] Length = 281 Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 9/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+++ +P+ +Y AD PYG+ + + + + + + Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGDRSAREILEFVREILAWM- 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + + ++ACNT+ L + +R F + LG + P K A Q I ++STPAT Sbjct: 65 TQQRVKMVIMACNTSSALAVEAVRQEF-DLPILGVILPGAKAAVK--QGQRIGVISTPAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I + V +E+ + E+ +E Sbjct: 122 AKSQAYRQAIQEINPNAQVWQVGCPPFVPLIEQN-RLWDVHTKEVARE---YLTPLLAHN 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +V CTHY + V + + P V +D + + + A+ L + +T Sbjct: 178 IDTLVYGCTHYRHLEPVIKTIIPTTVKLVDPASYVVQAAKKELELMGLSKTAPALPTRFA 237 Query: 252 LSGKPDIAMRRLMQGFGL 269 +SG + Q G Sbjct: 238 VSGCSSTFSQLSKQWLGY 255 >gi|320159866|ref|YP_004173090.1| glutamate racemase [Anaerolinea thermophila UNI-1] gi|319993719|dbj|BAJ62490.1| glutamate racemase [Anaerolinea thermophila UNI-1] Length = 273 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 6/254 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R LMP IY+AD PYG ++ + ++ + Sbjct: 2 IGVFDSGVGGLSVLRAIRALMPAEPVIYLADQAHVPYGPRPLEEVRGFSQSIARFLIAQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V V+ACNTA LR TFP F+G PA+K AA TQSG++ +L+TPAT + Sbjct: 62 ARV-IVVACNTASAAALFHLRQTFPETPFVGMEPAVKPAAETTQSGVVGVLATPATFQGA 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 ++++ + + + L ++E + +E ++ +E + + D + Sbjct: 121 LYASVVERFAQGVTLLQDTCAGLVQQIEAG----NLAGEETRRILENALLPMLARGMDTV 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSG 254 V+ CTHYP ++ + +Q+ V +D + ++AR+ R +L + +G Sbjct: 177 VMGCTHYPFVIPLIQQIVGEQVRVIDPAPAVARQTRRVLEAHGWLVEGNQPAPVRFLTTG 236 Query: 255 KPDIAMRRLMQGFG 268 + R + Q G Sbjct: 237 DGEAFRRMIRQLLG 250 >gi|331002651|ref|ZP_08326166.1| glutamate racemase [Lachnospiraceae oral taxon 107 str. F0167] gi|330407064|gb|EGG86568.1| glutamate racemase [Lachnospiraceae oral taxon 107 str. F0167] Length = 267 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 8/251 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I IFDSG+GGL V +++ MP+ +Y D PYG+ + K + Sbjct: 1 MNLPIGIFDSGVGGLTVAKEIVAQMPDESTVYFGDTARVPYGSKSGDTIIKYSRQIV-KF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130 L VIACNTA D L++ + +G + A A T+ G I ++ T Sbjct: 60 LQTKNVKAIVIACNTASAFALDILKTEI-DIPIMGVIHAGAVTAIKTTKVGRIGVVGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ I ++ + + +L VE+ ++ ++ I + + E + + Sbjct: 119 TISSGIYKKTIQDINNELEVIQKACPLLVPLVEDGLINDRVTDEIISRYV----SELKSR 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 D +VL CTHYPL+ F ++ V ++ + A+ + LL + N T+ H Sbjct: 175 HIDSLVLGCTHYPLLYKTFGRIMGEGVSLVNPAYETAKELKSLLEQKNLCATKDGGIFHD 234 Query: 250 LFLSGKPDIAM 260 ++S + Sbjct: 235 FYVSDMAERFS 245 >gi|254415880|ref|ZP_05029637.1| glutamate racemase [Microcoleus chthonoplastes PCC 7420] gi|196177307|gb|EDX72314.1| glutamate racemase [Microcoleus chthonoplastes PCC 7420] Length = 287 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 13/271 (4%) Query: 3 IDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 + N P + I +FDSG+GGL VL+++ +P +Y AD PYG Sbjct: 1 MTNDPILTLRGEAQHRRIGVFDSGVGGLTVLRELYRQLPHESILYFADTARLPYGTRSPR 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117 + + + + ++++ + V+ACNT+ L D LR F + LG + P + A Sbjct: 61 EIIQFGREILTWMVEQ-DVKMVVLACNTSDALALDTLRREF-QLPILGLILPGSRAAVQV 118 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + I +++TPAT + + VS VE+ + Sbjct: 119 GR--RIGVIATPATAASNAYRRALLEVEPTAQVWQVSCPEFVPLVEQNRLYEPYTSEVAL 176 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 + + +R D ++ CTHYPL+ V RQ+ P V +D ++ + A L + Sbjct: 177 QYLTPLLQ----QRIDTLIYGCTHYPLLAPVLRQILPASVQLIDPAEHVVAAAAQELDLM 232 Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 + +SG P + +Q G Sbjct: 233 GLKNSSPPLPTRFCVSGCPQQFAKLSVQWLG 263 >gi|289551045|ref|YP_003471949.1| Glutamate racemase [Staphylococcus lugdunensis HKU09-01] gi|289180577|gb|ADC87822.1| Glutamate racemase [Staphylococcus lugdunensis HKU09-01] Length = 266 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K L + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDIARCPYGPRPGDEVKAFTTELANKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ S+ +G + P + A T++ + IL T Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQ-HILSIPVIGVIEPGARTAIMTTKNQHVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I + V+ VE+ I I Sbjct: 119 TIKSEAYRHHIKRINPNVEVTGVACPGFVPLVEQMRYNDPTITSII---IHQTLKHWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249 D ++L CTHYPL+ + + AR LL N H + H Sbjct: 176 IADTVILGCTHYPLLYQPLNDYFGGDKTVISSGLETAREVSALLTFSNEHASYTAQPQHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G + + +K Sbjct: 236 FFSTGDTTHITNIIAEWLHMK 256 >gi|310766063|gb|ADP11013.1| glutamate racemase [Erwinia sp. Ejp617] Length = 283 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 86/265 (32%), Positives = 145/265 (54%), Gaps = 6/265 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 L+ ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + Sbjct: 16 APSVLRPTVLIFDSGVGGLSVYNEIRALLPDLHYLYAFDNVAFPYGEKSEEFIVERVVAI 75 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+ Sbjct: 76 VTAVTRLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLA 134 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++R YT LI + +C ++ S L E G + +E+++ ++ Sbjct: 135 TRGTVKRPYTHELIARFAGECKTEMLGSGELVEIAEAKLHGQPVALEEVRRILQPWLRMP 194 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ Sbjct: 195 EP--PDTVVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPEALSADDN 252 Query: 248 HALFLSGKPDIAMR--RLMQGFGLK 270 AL + G + A++ ++Q +G K Sbjct: 253 MALCM-GITEQAVQLIPVLQRYGFK 276 >gi|73662954|ref|YP_301735.1| glutamate racemase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642328|sp|Q49WR7|MURI_STAS1 RecName: Full=Glutamate racemase gi|72495469|dbj|BAE18790.1| glutamate racemase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 269 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 7/262 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL V +++ +P Y+ D PYG+ E +++ L + Sbjct: 1 MEKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIERCPYGSREGSEVRQFTTELAQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + + + VIACNTA + + L++ P + +G + P + A T++ + IL T Sbjct: 61 MT-FDIKMLVIACNTATAVALNHLQNILP-IPVIGVIEPGARTAIMTTKNNDVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I + + ++ A VE+ I I I Sbjct: 119 TIKSEAYRHHIKAINPNVEVTGIACPSFAPMVEQMRYKDPIITSII---IHQNLKHWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 D ++L CTHYPL+ + + AR LL N H + H Sbjct: 176 NADTVILGCTHYPLLYQPINDYFGGEKTVISSGLETAREVSALLTFSNEHAGYQRQPKHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271 F++G+ + R + + + + Sbjct: 236 FFVTGETEYIERIITEWLNISA 257 >gi|152988174|ref|YP_001350643.1| glutamate racemase [Pseudomonas aeruginosa PA7] gi|166231048|sp|A6VC58|MURI_PSEA7 RecName: Full=Glutamate racemase gi|150963332|gb|ABR85357.1| glutamate racemase [Pseudomonas aeruginosa PA7] Length = 265 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 5/256 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L Sbjct: 5 SAPVGVFDSGVGGLSVLREIRARLPAESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL Sbjct: 65 ERGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L R+E + + +E + Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLHGARTRALLERLLGPILEQGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + +L P + +D ++AR+ +L + + Sbjct: 180 DTLILGCTHYPFVKPLLAELIPADIAVIDTGAAVARQLERVLSTRALLASGQAAAPRFWT 239 Query: 253 SGKPDIAMRRLMQGFG 268 S P+ R L +G Sbjct: 240 SALPEEMERILPILWG 255 >gi|254819168|ref|ZP_05224169.1| glutamate racemase [Mycobacterium intracellulare ATCC 13950] Length = 271 Score = 294 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL V + + +P+ IYV D PYG ++ + + D++ Sbjct: 6 APVGVFDSGVGGLTVARAIIDQLPDEDIIYVGDTGHGPYGPLTIPDVRAHALAIGDDLVG 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA + R + +PA+++A A T++G I ++ T AT+ Sbjct: 66 RGVKAL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTQATIN 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + I V+ VE + ++ EG + + D Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251 +VL CTHYPL+ + + V + +++ A+ +L + + Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGEHVTLVSSAEETAKEVLRVLTERDLLRPHDAPPATRVFE 239 Query: 252 LSGKPDIAMRRLMQGFG 268 +G PD R + G Sbjct: 240 ATGDPDAFTRLAARFLG 256 >gi|86607856|ref|YP_476618.1| glutamate racemase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556398|gb|ABD01355.1| glutamate racemase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 287 Score = 294 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 105/274 (38%), Gaps = 18/274 (6%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E I +FDSG+GGL V + +R +P+ IY D PYG + + + Sbjct: 7 SEPDPSWPIGVFDSGLGGLTVWRALRRRLPQERLIYFGDTARLPYGERSPEEILAFVRQI 66 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + L V+ACNT+ L D +R F ++ LG + QAA Q I +L+ Sbjct: 67 LTWM-QAQPVKLVVMACNTSSALALDHVRQEF-ALPVLGLILPGAQAALA-QGSRIGVLA 123 Query: 128 TPATLRRTYTSNLIHSYVS--------QCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 T AT++ S I Y + + + +E + +++ Sbjct: 124 TVATVKSRAYSRAIQEYSALDPKRFPYPVYCWEQACPEFVPLIEAGW----LDSPALRQA 179 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 E + D +V CTHYPL+ + + L P V +D ++ L Sbjct: 180 AERYLQPLLQQGIDTLVYGCTHYPLLDPILKPLLPSSVKRVDPGMALVGSLARELSLWGL 239 Query: 240 HQTRVF---DDHALFLSGKPDIAMRRLMQGFGLK 270 + + H +SG P+ + G + Sbjct: 240 RRPSTAAQEEPHRFCVSGDPERFAQLATPWLGFR 273 >gi|325284166|ref|YP_004256707.1| Glutamate racemase [Deinococcus proteolyticus MRP] gi|324315975|gb|ADY27090.1| Glutamate racemase [Deinococcus proteolyticus MRP] Length = 365 Score = 294 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 116/276 (42%), Gaps = 26/276 (9%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL ++R +P+ F Y+AD PYG D ++ RL + L Sbjct: 5 APIGVFDSGVGGLSVLAELRRALPDERFCYLADTAHLPYGTRSDDDIR-RLTEAAARWLH 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 V+ACNTA LR TFP +G VPA+K AA T+SG+I +++TPATLR Sbjct: 64 GRGCKALVVACNTASAYGLQHLRGTFPEWPVVGLVPAVKPAALNTRSGVIGVMATPATLR 123 Query: 134 RTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + + L +S L VE + + + Sbjct: 124 GSKLQQSVAEWAAPRGVQVMLTTSPKLVPLVERGEA----DSPDARALLRQLLRPLAEAG 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-------- 243 D +VL CTHYP + R+ +D+ ++AR+ +L Sbjct: 180 ADQLVLGCTHYPFLSGSIRREFKDQFTLVDSGGAVARQTARVLAERGLLAPAAEPSSTPQ 239 Query: 244 -----------VFDDHALFLSGKPDIAMRRLMQGFG 268 +++G P A + ++Q G Sbjct: 240 PSSPQPTSLQLASPQVEYYVTGDPQAAQQIMLQLLG 275 >gi|1709187|sp|P52974|MURI_STAHA RecName: Full=Glutamate racemase gi|520574|gb|AAA20474.1| glutamate racemase [Staphylococcus haemolyticus] gi|1093233|prf||2103194B Glu racemase Length = 266 Score = 294 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 99/258 (38%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ L + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGDEVKQFTTQLANKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + ++ + VIACNTA + + L+ P + +G + P + A T++ + IL T Sbjct: 61 M-QFDIKMLVIACNTATAVALEHLQQMLP-IPVIGVIEPGSRTAIMTTKNQNVLILGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I H+ VE+ + I + Sbjct: 119 TIKSEAYRHHIKHINPNVHVLWCGLPGFVPLVEQMRYDDPTITSIV---IHQTLKQWRNT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 D I+L CTHYPL+ + + AR LL N H + +H Sbjct: 176 DADTIILGCTHYPLLYKPINDYFGGEKKVISSGLETAREVSALLTFSNEHASYTQHPEHR 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G ++Q Sbjct: 236 FFATGDTVHIKNIILQWL 253 >gi|283796789|ref|ZP_06345942.1| glutamate racemase [Clostridium sp. M62/1] gi|291075679|gb|EFE13043.1| glutamate racemase [Clostridium sp. M62/1] gi|295115201|emb|CBL36048.1| glutamate racemase [butyrate-producing bacterium SM4/1] Length = 271 Score = 294 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 97/251 (38%), Gaps = 10/251 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V +++ MPE +Y D PYG + + + + Sbjct: 4 NAPIGVFDSGVGGLTVAREIMRQMPEEKLVYFGDTARVPYGTKSQETVIRYSRQIIRFLR 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 K + VIACNTA + + + +G + A + A T++ I I+ T AT Sbjct: 64 TK-EVKAIVIACNTATACALETV-EKDLDIPIIGVIHAGARAAVEATKNRKIGIIGTEAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + L+ + + VEE + ++ + K Sbjct: 122 IRSGVYTELMKQMNPAIEVTGKPCPLFVPLVEEGLLHDSVTDE----IASRYLASLKEKY 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDH 248 D +V+ CTHYPL+ +L V ++ + AR + LL + + Sbjct: 178 IDTLVMGCTHYPLLRSTLARLMGEEVTLINPAYETARELKSLLGEKELTCIPGEAGGEKY 237 Query: 249 ALFLSGKPDIA 259 F+S + Sbjct: 238 QFFVSDMAERF 248 >gi|85060131|ref|YP_455833.1| glutamate racemase [Sodalis glossinidius str. 'morsitans'] gi|123518781|sp|Q2NQZ7|MURI_SODGM RecName: Full=Glutamate racemase gi|84780651|dbj|BAE75428.1| glutamate racemase [Sodalis glossinidius str. 'morsitans'] Length = 290 Score = 294 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 7/263 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +IL+FDSG+GGL + ++R +P H++YV D+ FPYG + + R++ + + Sbjct: 25 RPTILVFDSGVGGLSIYNEVRQTLPNAHYLYVFDNEAFPYGEKPEQFIVDRVVAIVGAMW 84 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++ L ++ACNTA T+ LR FP +G VPAIK AA T++G++ +L+T AT+ Sbjct: 85 RQHKIDLVIVACNTASTISLPALRERFPC-PIIGVVPAIKPAARLTRNGIVGLLATRATV 143 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R+YT +LI Y C I + + L E G + ++K + + + Sbjct: 144 QRSYTHDLISQYAGDCQILQLGTAELVDMAEARLHGELVPLPVLRKLLRPWL--RAAEPP 201 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDDHA 249 D +VL CTH+PL+ + + P +D+ +IARRA L+ +++ Q + Sbjct: 202 DTVVLGCTHFPLLSQELQAVLPEGTRLVDSGSAIARRAAWLVEHDMDVSSLQGETGPNKT 261 Query: 250 LF-LSGKPDIAMRRLMQGFGLKS 271 ++ +A+ + +G S Sbjct: 262 YCLVTTPQAVALMPALTRYGFGS 284 >gi|159900727|ref|YP_001546974.1| glutamate racemase [Herpetosiphon aurantiacus ATCC 23779] gi|229486239|sp|A9AXC6|MURI_HERA2 RecName: Full=Glutamate racemase gi|159893766|gb|ABX06846.1| glutamate racemase [Herpetosiphon aurantiacus ATCC 23779] Length = 254 Score = 294 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 7/251 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL L+ +R L+P IY AD PYG + L + IL Sbjct: 3 DQPIGMFDSGVGGLSTLRDLRALLPHEDIIYYADTGNCPYGGRSHEEIVA-LSERITYIL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA D LR F S++F+G P IK A A T++G++ +++T AT+ Sbjct: 62 LERGVKLIVVACNTATLHAVDYLREHF-SISFVGMEPGIKPAIAQTKTGVVGVMATQATV 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 LI Y + + L +E + D + + + Sbjct: 121 AGERFQRLIARYAGDVQVVPQACPGLVELIEAGELQSETTRDAVARYVAPLL----KAGA 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251 D IVL CTHYP + + ++ V LD ++AR+ + LL + + Sbjct: 177 DTIVLGCTHYPFLRSLIADVAGPNVALLDTGAAVARQTQRLLAAADLLNPQTSQGSIEWL 236 Query: 252 LSGKPDIAMRR 262 SG P + Sbjct: 237 TSGDPAHFAKI 247 >gi|242241176|ref|YP_002989357.1| glutamate racemase [Dickeya dadantii Ech703] gi|242133233|gb|ACS87535.1| glutamate racemase [Dickeya dadantii Ech703] Length = 295 Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 83/259 (32%), Positives = 140/259 (54%), Gaps = 4/259 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + S+LIFDSG+GGL V +++R L+P+ H+IY D+ FPYG + + +R++ + + Sbjct: 22 ARPSVLIFDSGVGGLSVYEEIRKLLPDLHYIYTFDNEAFPYGEKPEQFIIERVVSIVDAV 81 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ VIACNTA T+ LR+ F + +G VPAIK AA T++G++ +L+T AT Sbjct: 82 EKQHPLSAVVIACNTASTISLPALRARF-NFPVVGVVPAIKPAAKLTRNGVVGLLATRAT 140 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + C I + S L E G ++ D ++K ++ K + Sbjct: 141 VQRPYTHELISRFAHDCTILSLGSSELVEWGEAKLQGDEVPIDALRKILKPWL--KLPEP 198 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PL+ + +Q P +D+ +IARR L+ + + Sbjct: 199 PDTVVLGCTHFPLLANELQQALPEGTRLVDSGAAIARRTAWLVKHLENPFLSKEKNLVYC 258 Query: 252 LSGKPDIA-MRRLMQGFGL 269 L+ P +A + ++Q +G Sbjct: 259 LAITPKVATLWPVLQRYGF 277 >gi|299535537|ref|ZP_07048858.1| glutamate racemase [Lysinibacillus fusiformis ZC1] gi|298728737|gb|EFI69291.1| glutamate racemase [Lysinibacillus fusiformis ZC1] Length = 265 Score = 294 bits (754), Expect = 8e-78, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG ++ + Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIMKRLPNETIYYIGDTARCPYGPRSRQEVRNFTWQ-MAKA 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130 L+K + VIACNTA + + L+ P LG + A + A T+ + +L+T Sbjct: 60 LEKMNVKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + HI ++ VE + I + + Sbjct: 119 TIKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKGDFANN----LIAEGLKPLKNR 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249 + D ++L CTHYP++ + V+ L +++ A+ + +L T H Sbjct: 175 QFDTVILGCTHYPILQKQIEAVVGEDVNVLSSAEETAKDVQEMLAYNGTLANANAVPAHR 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 235 FFATGSVPIFRSIAENWL 252 >gi|294789006|ref|ZP_06754246.1| glutamate racemase [Simonsiella muelleri ATCC 29453] gi|294483108|gb|EFG30795.1| glutamate racemase [Simonsiella muelleri ATCC 29453] Length = 272 Score = 294 bits (754), Expect = 8e-78, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 12/270 (4%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M + + I +FDSG+GGL V++ + +P + +Y D PYG + + Sbjct: 1 MIM----MSPNNEKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTI 56 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQ 119 ++ + +L + + VIACNT + ++ +M + + A QAA A T+ Sbjct: 57 EEFTAQIVEFLL-QNEVKALVIACNTIAAVAYKRVQQMVGNMPIISVIEAGAQAALATTR 115 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I +++T T+ + IH+ I +S IL VEE ++ +++ Sbjct: 116 NNHIGVIATSTTVNSNAYARAIHAQNPDTRILSQASPILVPLVEEGWLDHEVTRLTVREY 175 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRIN 238 ++ E D +VL CTHYPL+ + ++ + ++ +D+S + A + LL Sbjct: 176 LKPILAE----DVDTLVLGCTHYPLLKPLIKKEA-NTLELVDSSITTAEATAQALLDAHL 230 Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 + ++ D+ ++S P + G Sbjct: 231 LNTSQQMPDYRFYVSDIPLRFQTIGERFLG 260 >gi|116512125|ref|YP_809341.1| glutamate racemase [Lactococcus lactis subsp. cremoris SK11] gi|123025382|sp|Q02YQ3|MURI_LACLS RecName: Full=Glutamate racemase gi|116107779|gb|ABJ72919.1| glutamate racemase [Lactococcus lactis subsp. cremoris SK11] Length = 271 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 17/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V +++ +P +Y+ D PYG + Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K + V+ACNTA + + ++ + +G + P A T++ Sbjct: 53 FTWDMVNFLLSK-NVKMIVMACNTATAMTLEIVKEEL-DIPVIGVILPGASSAIQKTKTN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T A++R I S + ++ S VE +++ + K+ + Sbjct: 111 KIGVIATQASIRSDEYHKTIARKSSAIEVLSLACPKFVSIVESN----EMESEIAKRVVS 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 GK D ++L CTHYPL+ + ++ V +D+ R LL + Sbjct: 167 ESLAPLVGK-IDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLLNYFEINA 225 Query: 242 -TRVFDDHALFLSGKPDIAMRRLMQGFGL 269 R H + + + + + Sbjct: 226 HERKEYQHCFYTTAGVNSFREIAEKWLNI 254 >gi|41408522|ref|NP_961358.1| glutamate racemase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81571208|sp|Q73X85|MURI_MYCPA RecName: Full=Glutamate racemase gi|41396878|gb|AAS04741.1| MurI [Mycobacterium avium subsp. paratuberculosis K-10] Length = 275 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 12/261 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + IFDSG+GGL V + + +P+ H IYV D PYG ++ + + D++ Sbjct: 6 APVGIFDSGVGGLTVARAIIDQLPDEHIIYVGDTGHGPYGPLSIPEVRAHALAIGDDLVG 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA + R + +PA+++A A T++G I ++ T AT+ Sbjct: 66 RGVKAL-VIACNTASAACLRDARERYEVPVVEVILPAVRRAVATTRNGRIGVIGTQATIN 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + I V+ VE + ++ EG + + D Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---- 249 +VL CTHYPL+ + + V + +++ A+ +L + D A Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGDNVTLVSSAEETAKEVLRVLAERDLLHPHPDDPRAAGPS 239 Query: 250 --LFLSGKPDIAMRRLMQGFG 268 +G P+ R + G Sbjct: 240 RVFEATGDPEAFTRLAARFLG 260 >gi|304391421|ref|ZP_07373363.1| glutamate racemase [Ahrensia sp. R2A130] gi|303295650|gb|EFL90008.1| glutamate racemase [Ahrensia sp. R2A130] Length = 260 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 120/255 (47%), Positives = 174/255 (68%), Gaps = 2/255 (0%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++L+FDSG+GGL VL++ R LMP + F+YVADD FPYG+WE AL +R+M +F D++ + Sbjct: 2 TVLVFDSGLGGLSVLREARILMPGHRFVYVADDAAFPYGDWEAEALVERMMEVFEDLVTR 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 ++P + ++ACNTA T+I LRS F +G VPAIK AA T SG IS+L+TP T++R Sbjct: 62 FEPSMIIVACNTASTIILPHLRSRF-DFPVVGTVPAIKLAAELTASGHISVLATPGTVQR 120 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT +LI + S ++ LV + +A E + + + +K EIE CF+++ G RTDV Sbjct: 121 DYTRSLISEFASTVNVRLVGAEKMAGLAEHFMLTGETDTEAVKSEIEDCFVDQYGARTDV 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VLACTHYP + +V+R+L+PWPVDWL+ +++IAR A+ LLP + D A F G Sbjct: 181 VVLACTHYPFLTNVYRRLAPWPVDWLNPAEAIARHAKSLLP-DGDQPVKPIQDLAHFTGG 239 Query: 255 KPDIAMRRLMQGFGL 269 KPD+ +RL+ GFGL Sbjct: 240 KPDVLRQRLLSGFGL 254 >gi|118465713|ref|YP_880790.1| glutamate racemase [Mycobacterium avium 104] gi|254774375|ref|ZP_05215891.1| glutamate racemase [Mycobacterium avium subsp. avium ATCC 25291] gi|166231040|sp|A0QD02|MURI_MYCA1 RecName: Full=Glutamate racemase gi|118167000|gb|ABK67897.1| glutamate racemase [Mycobacterium avium 104] Length = 275 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 12/261 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + IFDSG+GGL V + + +P+ H IYV D PYG ++ + + D++ Sbjct: 6 APVGIFDSGVGGLTVARAIIDQLPDEHIIYVGDTGHGPYGPLSIPEVRAHALAIGDDLVG 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA + R + +PA+++A A T++G I ++ T AT+ Sbjct: 66 RGVKAL-VIACNTASAACLRDARERYEVPVVEVILPAVRRAVATTRNGRIGVIGTQATIN 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + I V+ VE + ++ EG + + D Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---- 249 +VL CTHYPL+ + + V + +++ A+ +L + D A Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGDNVTLVSSAEETAKEVLRVLTERDLLHPHPDDPRAAGPS 239 Query: 250 --LFLSGKPDIAMRRLMQGFG 268 +G P+ R + G Sbjct: 240 RVFEATGDPEAFTRLAARFLG 260 >gi|227504002|ref|ZP_03934051.1| glutamate racemase [Corynebacterium striatum ATCC 6940] gi|227199396|gb|EEI79444.1| glutamate racemase [Corynebacterium striatum ATCC 6940] Length = 258 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 7/261 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + +P IY+ D PYG +++ + Sbjct: 1 MPDATSPIGIFDSGVGGLTVARTIIEQLPNESVIYIGDTEHSPYGPRPIAEVRELSTKIA 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +++++ + VIACNTA + R + PA+++A A T++G I ++ T Sbjct: 61 DELVERG-CKMIVIACNTATAAFLHDARERYDIPVVEVIRPAVRRAIATTRNGKIGVIGT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ +L + H V+ VE + +I EG + Sbjct: 120 EGTVNSGAYQDLF-AVNPHVEAHAVACPDFVGFVERGITAGR----QILGVAEGYLAPLQ 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D +VL CTHYPL+ V + V + +++ A+ L + + Sbjct: 175 SVGVDTLVLGCTHYPLLTGVIQLAMGDNVTLVSSAEETAKDVMRTLTETDMLAPEGQEAV 234 Query: 249 ALF-LSGKPDIAMRRLMQGFG 268 F +G P+ R + G Sbjct: 235 RKFESTGDPETFSRLATRFLG 255 >gi|296170277|ref|ZP_06851868.1| glutamate racemase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895000|gb|EFG74719.1| glutamate racemase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 271 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ Sbjct: 6 APVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGHGPYGPLTIPEVRAHALAIGDDLVG 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA + R + +PA+++A A T++G I ++ T AT+ Sbjct: 66 RGVKAL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTQATIN 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + V+ VE + ++ EG + + D Sbjct: 125 SHAYQDAFAA-ARDTEVTAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251 +VL CTHYPL+ + + V + +++ A+ +L + + Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGEQVTLVSSAEETAKEVLRVLTERDLLRAHEAPPATRVFE 239 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P+ + + G Sbjct: 240 ATGDPEAFTKLAARFLG 256 >gi|317151766|ref|YP_004119814.1| glutamate racemase [Desulfovibrio aespoeensis Aspo-2] gi|316942017|gb|ADU61068.1| glutamate racemase [Desulfovibrio aespoeensis Aspo-2] Length = 279 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 112/267 (41%), Gaps = 7/267 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E + I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + Sbjct: 1 MENAAKLPIGMFDSGVGGLTVLRALRERMPCEDVVYLGDTARLPYGTKSPQTVSRYAVQC 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 ++++ + + L V+ACNTA + LR +P + +G V P + A T++ I ++ Sbjct: 61 AAELVRR-EIKLLVVACNTASAVAIGPLREAYPGIPVIGVVEPGAQAACRATRNQAIGVI 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT+ IH+ + I + + EE + E + + F Sbjct: 120 ATEATIAGGAYHRAIHAIAPEARIVGHPCQLFVALAEEGWIDGPVAEGVAARYLHPVFRP 179 Query: 187 KEGKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 G D +VL CTH+PL+ R + V +D++ + A L R+N + Sbjct: 180 ASGTESPVIPDTLVLGCTHFPLLAPAIRSVLDPSVVIVDSAATTAETVYAELARLNLGRP 239 Query: 243 RVF-DDHALFLSGKPDIAMRRLMQGFG 268 D A + R + G Sbjct: 240 GTGCGDTAYLTTDDAARFARTGTRFLG 266 >gi|46579181|ref|YP_009989.1| glutamate racemase [Desulfovibrio vulgaris str. Hildenborough] gi|120603245|ref|YP_967645.1| glutamate racemase [Desulfovibrio vulgaris DP4] gi|46448594|gb|AAS95248.1| glutamate racemase [Desulfovibrio vulgaris str. Hildenborough] gi|120563474|gb|ABM29218.1| glutamate racemase [Desulfovibrio vulgaris DP4] gi|311233019|gb|ADP85873.1| glutamate racemase [Desulfovibrio vulgaris RCH1] Length = 282 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 9/260 (3%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++ + I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + S Sbjct: 4 EQARLPIGLFDSGVGGLTVLKALRQRMPCEDMLYLGDTARLPYGTKSSETIARYALQATS 63 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128 ++++ L V+ACNTA ++ D LR +P + +G V P + + + G I++++T Sbjct: 64 KLVERR-IKLLVVACNTATSVALDTLREAYPGIPVIGVVEPGAQASCRASLQGRIAVIAT 122 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 +T+R IH Q HI + + EE I E + ++ F Sbjct: 123 ESTIRGRAYHKAIHRLRPQAHIVGQACPLFVPLAEEGWVDGPIAESIAARYLDPIFKPAS 182 Query: 189 GKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 G D +VL CTH+PL+ R + V +D++ + A L + Sbjct: 183 GSDRVETPDCLVLGCTHFPLLARAIRNVIGPDVVIVDSAATTAFAVHQELDARGLIHPQH 242 Query: 245 FDD---HALFLSGKPDIAMR 261 DD + R Sbjct: 243 GDDCGTTRFLTTDDVPRFAR 262 >gi|288940398|ref|YP_003442638.1| glutamate racemase [Allochromatium vinosum DSM 180] gi|288895770|gb|ADC61606.1| glutamate racemase [Allochromatium vinosum DSM 180] Length = 282 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 6/257 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + I +FDSG+GGL VL+++R L+P +YVAD PYG+ ++ R + + Sbjct: 2 NPHHPIGVFDSGLGGLTVLREIRRLLPGEDLLYVADSAHAPYGDKSMAFIESRSIAITEF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L++ V+ACNTA LR+ + ++ + PA+K A T+SG++++L+T Sbjct: 62 LLERGA-KAIVVACNTATGAAAKLLRTQY-NVPLIAMEPAVKPAVERTRSGVVAVLATRR 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL S L+ + I L L RVE + + ++ + G + Sbjct: 120 TLASHNFSVLLGRLETDAEILLQPCPGLVERVEAG----DLAGEGTRELLRGYLEPLLAR 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTHYPL+ + ++L+ V LD+ +AR+ R L Sbjct: 176 GADTLVLGCTHYPLLTPLIQELAGPDVLILDSGIGVARQVRRRLSEAELLAPEERTGRER 235 Query: 251 FLSGKPDIAMRRLMQGF 267 F + P M LM Sbjct: 236 FWTSAPPARMHALMARL 252 >gi|163753921|ref|ZP_02161044.1| glutamate racemase [Kordia algicida OT-1] gi|161326135|gb|EDP97461.1| glutamate racemase [Kordia algicida OT-1] Length = 259 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 7/260 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GG + +++ +P H IY+AD PYG + + +++L Sbjct: 3 NSPIGIFDSGVGGTSIWREIHKRLPSEHTIYLADSKNAPYGPKGKEKIIDLSVKN-TELL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K + V+ACNTA T LR + + F+G PAIK AA T+SG I IL+T TL Sbjct: 62 LKKGCKMIVVACNTATTNAIRHLRKNY-DVPFIGIEPAIKPAALQTKSGTIGILATKGTL 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y + I L +E KI+ E++K ++ Sbjct: 121 SSELFHKTSDLYANGVQIIEQVGEGLVPLIENG----KIESPEMEKLLKLYLTPMLHANI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251 D +VL C+HYP ++ + P V +D+ ++AR+ +L + + Q + + Sbjct: 177 DYLVLGCSHYPYLIPKLQSFLPKHVKIIDSGIAVARQTEAILAKHDLSTQEETRGNCIFY 236 Query: 252 LSGKPDIAMRRLMQGFGLKS 271 +G P+I L F +++ Sbjct: 237 SNGNPEILQHILKHDFSVEA 256 >gi|182624295|ref|ZP_02952080.1| glutamate racemase [Clostridium perfringens D str. JGS1721] gi|177910513|gb|EDT72886.1| glutamate racemase [Clostridium perfringens D str. JGS1721] Length = 260 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 6/242 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GGL VL+K +MP ++IY D PYG ++ ++ Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + NL+ Y + + L +E ++ +++K + + Sbjct: 126 NQEKFKNLMDKYGEHREVISLPCPGLVEFIEAG----DLEGEDVKNFLREKLNPYMDREI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251 IVL CTHYP + V + + VD +D S R + L N +++ + +F Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241 Query: 252 LS 253 S Sbjct: 242 NS 243 >gi|15827591|ref|NP_301854.1| glutamate racemase [Mycobacterium leprae TN] gi|221230068|ref|YP_002503484.1| glutamate racemase [Mycobacterium leprae Br4923] gi|1171077|sp|P46705|MURI_MYCLE RecName: Full=Glutamate racemase gi|254766120|sp|B8ZR57|MURI_MYCLB RecName: Full=Glutamate racemase gi|466915|gb|AAA50890.1| murI [Mycobacterium leprae] gi|13093142|emb|CAC31553.1| glutamate racemase [Mycobacterium leprae] gi|219933175|emb|CAR71267.1| glutamate racemase [Mycobacterium leprae Br4923] Length = 272 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 107/256 (41%), Gaps = 8/256 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ + Sbjct: 7 PVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLSIPEIRAHALAICDDLVGR 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA + R + +PA+++A A T++G I ++ T AT+ Sbjct: 67 G-VKILVIACNTASAACLRDARERYDVPVVEVILPAVRRAVAATRNGRIGVIGTRATIAS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + I V+ VE + ++ EG + D Sbjct: 126 HAYQDAFAA-ARDTEITAVACPRFVDFVECGVTSGR----QVLGLAEGYLEPLQRSGVDT 180 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFL 252 +VL CTHYPL+ + + V + +++ A+ +L + + + Sbjct: 181 LVLGCTHYPLLAGLIQLAMGENVTLVSSAEETAKEVLRVLTERDLLRRHDAPPVNRVFEA 240 Query: 253 SGKPDIAMRRLMQGFG 268 +G P+ ++ + G Sbjct: 241 TGDPEAFIQLAARFLG 256 >gi|261346833|ref|ZP_05974477.1| glutamate racemase [Providencia rustigianii DSM 4541] gi|282565012|gb|EFB70547.1| glutamate racemase [Providencia rustigianii DSM 4541] Length = 287 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 4/260 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +IL+FDSG+GGL V ++++ ++P H+IY D+ FPYG + + +R+ + + + Sbjct: 25 RPTILVFDSGVGGLSVYREVKKMLPNAHYIYAFDNEAFPYGEKTEEFIIERVYQIVNAVA 84 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K+ ++VIACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+ Sbjct: 85 KKHPLTIAVIACNTASTVSLPNLRAHF-TFPIVGVVPAIKPATKLTRNGIVGLLATKGTV 143 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + C + L+ S L E G + DE+ + I KE Sbjct: 144 NREYTKELIERFATDCKVILLGSAELVQLAERKLHGETLPLDEVAQAIRPWIKMKEA--P 201 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTH+PLIV ++ P ++D+ +IARR L+ +D A + Sbjct: 202 DTVILGCTHFPLIVEELEKVLPNGTRFIDSGAAIARRTVWLINNQAEIANSNEEDFAYCM 261 Query: 253 SGKPDIA-MRRLMQGFGLKS 271 + +R +++ G KS Sbjct: 262 LMNDALQELRPVLESEGFKS 281 >gi|49082808|gb|AAT50804.1| PA4662 [synthetic construct] Length = 266 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L R+E + + + +E + Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + +L P + +D ++AR+ +L + + Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239 Query: 253 SGKPDIAMRRLMQGFG 268 S P+ R L +G Sbjct: 240 SALPEEMERILPILWG 255 >gi|261868128|ref|YP_003256050.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413460|gb|ACX82831.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 275 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 5/260 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +IL FDSG+GG V +++ L+P+YH++Y D+ FPY + + +R + + I Sbjct: 6 KPTILFFDSGVGGFSVYHEVKQLLPDYHYLYCFDNAYFPYSEKPEEKIIERTLKICQRID 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y L VIACNTA T++ LR F S+ +G VPAIK AAA T + I +L+T T+ Sbjct: 66 QMYPLDLIVIACNTASTVVLPSLREHF-SIPIVGTVPAIKPAAAQTTTKHIGLLATKGTV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R Y S+LI Y + C + + S L E G I +EIK E+ Sbjct: 125 NRKYLSDLIDKYAADCRVEKIGSTKLVELAERKFHGYPIDLNEIKSEVLTWV---TMSDL 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTH+PLI +Q P + ++D+ ++A+R LL + ++ Sbjct: 182 DCVVLGCTHFPLIKSEIQQCLPQVIYFIDSGAAVAKRVESLLSDVKVRSKNQTNNQVFCT 241 Query: 253 SG-KPDIAMRRLMQGFGLKS 271 P+ + L+Q G ++ Sbjct: 242 KMISPEDGLPNLIQSLGFET 261 >gi|241889903|ref|ZP_04777201.1| glutamate racemase [Gemella haemolysans ATCC 10379] gi|241863525|gb|EER67909.1| glutamate racemase [Gemella haemolysans ATCC 10379] Length = 264 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + N+I +FDSG+GGL V +++ +P Y D PYG+ + K + Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTKEEIIKNTDRAVKFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +DK L V+ACNTA D L++ + + +G V P ++A T++ + +L T Sbjct: 61 IDKG-VKLVVLACNTATAAALDYLQNKY-EVPIIGVVQPGARRAIQATENNKVLVLGTKF 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T I + S + + +E + ++ K I Sbjct: 119 TANSKVYDIEIENINSDIIVFDKACPAFVPFIES---EGNLDKEATKNLISDTLGNTNTL 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249 D +VL CTHYP++ + + + + AR +L HQ + +H Sbjct: 176 GVDTVVLGCTHYPILKKDIEEYYGNNIKVISSGREAAREVSTVLGYTKLHQKKFNKKEHR 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 F+S K D + Sbjct: 236 FFISQKSDNFDSIASKWL 253 >gi|15599857|ref|NP_253351.1| glutamate racemase [Pseudomonas aeruginosa PAO1] gi|107099671|ref|ZP_01363589.1| hypothetical protein PaerPA_01000689 [Pseudomonas aeruginosa PACS2] gi|218893759|ref|YP_002442628.1| glutamate racemase [Pseudomonas aeruginosa LESB58] gi|296391483|ref|ZP_06880958.1| glutamate racemase [Pseudomonas aeruginosa PAb1] gi|20177990|sp|Q9HVD0|MURI_PSEAE RecName: Full=Glutamate racemase gi|226722988|sp|B7V0K8|MURI_PSEA8 RecName: Full=Glutamate racemase gi|9950917|gb|AAG08049.1|AE004880_5 glutamate racemase [Pseudomonas aeruginosa PAO1] gi|218773987|emb|CAW29802.1| glutamate racemase [Pseudomonas aeruginosa LESB58] Length = 265 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L R+E + + + +E + Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + +L P + +D ++AR+ +L + + Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239 Query: 253 SGKPDIAMRRLMQGFG 268 S P+ R L +G Sbjct: 240 SALPEEMERILPILWG 255 >gi|160947016|ref|ZP_02094219.1| hypothetical protein PEPMIC_00978 [Parvimonas micra ATCC 33270] gi|158447400|gb|EDP24395.1| hypothetical protein PEPMIC_00978 [Parvimonas micra ATCC 33270] Length = 267 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 111/264 (42%), Gaps = 15/264 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN SI +FDSGIGGL V++++ ++P +Y D PYG + +K+ Sbjct: 1 MDNR--------SIGVFDSGIGGLTVVKELTKILPNEKIVYFGDTARVPYGTRSEETIKR 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + L++ +IACNT + + L+ F +P K A+ T++ Sbjct: 53 FSKECI-EFLNQKDIKALIIACNTVSAVALEMLKELFDIYILGVIIPGSKMASYVTKNKK 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I ++ T AT+ I S S+ ++ + + VEE +I + K Sbjct: 112 IGVIGTNATVLSGAYEKCIKSENSENIVYSKACPLFVPIVEEGLSNTEIALETAK----Y 167 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ- 241 E + D IV+ CTHYP++ + + + + ++ + A + L N Sbjct: 168 YLNELINQDVDTIVMGCTHYPILENTIKAVVGKDISLVNPAKETANEMKKYLEFNNLLNE 227 Query: 242 -TRVFDDHALFLSGKPDIAMRRLM 264 + ++ +++ + + L+ Sbjct: 228 ESENIKNNIFYITDDENKFKKNLL 251 >gi|307822892|ref|ZP_07653122.1| glutamate racemase [Methylobacter tundripaludum SV96] gi|307735667|gb|EFO06514.1| glutamate racemase [Methylobacter tundripaludum SV96] Length = 270 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 7/258 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 N I +FDSG+GGL VL ++R +P +YVAD PYG+ ++ R + + Sbjct: 2 NAANPIGVFDSGVGGLSVLHEIRRALPGEDLLYVADSAHAPYGDKSQQFIENRSIAITEF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + V+ACNTA LRS F SM + PA+K A+ ++SG+I +L+T Sbjct: 62 LVSR-NAKAIVVACNTATGAAITTLRSRF-SMPIIAMEPAVKPASENSKSGVIGVLATSR 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL L Y + I + L +VE + D+ + +E + + Sbjct: 120 TLASDNFVKLFARYGADVEILGQACPGLVEQVEAG----DLSGDKTRILLERYVLPLLER 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249 D +VL CTHYP + + RQ++ V +D++ ++AR+ R L ++ + Sbjct: 176 GADTLVLGCTHYPFLAPLIRQIAGPGVTVIDSAAAVARQLRRRLEVVDLLADGARVGGES 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 + SG D A+ Q + Sbjct: 236 CWTSGVVDKALPLFAQLW 253 >gi|318041257|ref|ZP_07973213.1| glutamate racemase [Synechococcus sp. CB0101] Length = 272 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 6/258 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V +++ +P+ IY+AD PYG ++ + ++ Sbjct: 4 APIGIFDSGLGGLSVWRQVVHHLPDESVIYLADQAHVPYGQRSAQEIQAYCSEIAGQLIA 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 V+ACNTA + + LR FP + LG PA+K A T SG++ +++TPAT + Sbjct: 64 -MGCKAIVVACNTASAVALEPLRQAFPQLPILGLEPAVKPAVELTNSGVVGVMATPATFQ 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + + LA VE + + ++ + D Sbjct: 123 GELYRATVGRWAGDVQVVEQVCIGLADLVEIGELEGERCDALLRSFLNPML----EAGAD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252 IVL CTHYP ++ R+L + LD + ++AR +L + + F Sbjct: 179 TIVLGCTHYPFVIEAIRRLVGPGLAVLDPAPAVARHLGEVLTAQGLLNGSSAGRELRFFT 238 Query: 253 SGKPDIAMRRLMQGFGLK 270 S +PD R + + G + Sbjct: 239 SAQPDRFDRSVGRLVGAR 256 >gi|169829488|ref|YP_001699646.1| glutamate racemase [Lysinibacillus sphaericus C3-41] gi|229486243|sp|B1HW77|MURI_LYSSC RecName: Full=Glutamate racemase gi|168993976|gb|ACA41516.1| Glutamate racemase [Lysinibacillus sphaericus C3-41] Length = 265 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 102/258 (39%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG ++ + Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIIKRLPNETIYYIGDTARCPYGPRSRQEVRNFTWQ-MAKA 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130 L+K + VIACNTA + + L+ P LG + A + A T+ + +L+T Sbjct: 60 LEKMNIKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + HI ++ VE + K I + + Sbjct: 119 TIKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKGEFA----TKLIAEGLKPLKNQ 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249 + D ++L CTHYP++ + V+ L +++ A+ A+ +L T H Sbjct: 175 QFDTVILGCTHYPILQKQIEAVVGEEVNVLSSAEETAKDAQEMLAYNGTLANANTVPAHK 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G I Sbjct: 235 FFATGSVPIFRSIAENWL 252 >gi|300775208|ref|ZP_07085070.1| glutamate racemase [Chryseobacterium gleum ATCC 35910] gi|300505948|gb|EFK37084.1| glutamate racemase [Chryseobacterium gleum ATCC 35910] Length = 276 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I IFDSG+GGL V ++++ L+P IY D PYG A+ + + + + Sbjct: 13 PSQPIGIFDSGVGGLTVAKEIKRLLPNEDLIYFGDTKHLPYGEKSREAIIEYSTKITNFL 72 Query: 72 LDKYQPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L++ VIACNTA +E ++S + + + + + +Y + +++T A Sbjct: 73 LEQ-NCKAIVIACNTATANALNEVMQSVAGRVPVIDVINPVAEKVSYEIHNNVGVIATKA 131 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ I + + +++ +L +EE I I + + K Sbjct: 132 TVNSGLYKKSIRKHNKWIKVDELATPLLVPAIEEGFKNHPITHAIIYNYLSNS----KLK 187 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249 + ++L CTHYPL++ +Q V +D+ + +A + ++ + + ++ Sbjct: 188 NIETLILGCTHYPLLIDEIKQYYGNRVRVIDSPNIVANHLKIIMDKYHLLNENNPKPNYH 247 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +LS + + FG Sbjct: 248 FYLSDLTKNFEKISKKFFG 266 >gi|257126623|ref|YP_003164737.1| glutamate racemase [Leptotrichia buccalis C-1013-b] gi|257050562|gb|ACV39746.1| glutamate racemase [Leptotrichia buccalis C-1013-b] Length = 261 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 11/251 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSGIGGL VL+++R ++P Y D PYG + + + +L+K Sbjct: 2 SIGVFDSGIGGLTVLKEIRKVLPNEKIYYFGDTARVPYGEKTKELIIRYSKEIVEFLLEK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133 V+ACNTA L EL+ F + +G + A + A T++G I ++ T AT+ Sbjct: 62 -DVSAIVVACNTATALALKELKEIFK-IPIIGVIEAGARTAINTTKNGKIGVIGTKATIN 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + I + ++ + + + VEE K+ IK ++ ++ D Sbjct: 120 SEKYTEEIKLFNAEAEVFQKACPLFVPAVEEGILNGKLVNQIIKTYLDDF-----NEKID 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251 ++L CTHYPL+ ++ P + +D + A + +L + + ++ + Sbjct: 175 TLILGCTHYPLLKEAISKIYP-NIKIVDPAKETALDLKEILKENKFLKNDAQKNEEVKYY 233 Query: 252 LSGKPDIAMRR 262 ++ + Sbjct: 234 VTDGKEKFKEI 244 >gi|210623229|ref|ZP_03293668.1| hypothetical protein CLOHIR_01618 [Clostridium hiranonis DSM 13275] gi|210153766|gb|EEA84772.1| hypothetical protein CLOHIR_01618 [Clostridium hiranonis DSM 13275] Length = 267 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 8/249 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL++++ ++P +Y D PYG + K + +L Sbjct: 3 KRGIGVFDSGLGGLTVLKEIKKILPNEDLVYFGDTARVPYGPRSKETIMKYTFQAINFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 K VIACNTA E + + + +G + A + AAA T++G + I+ T T Sbjct: 63 TK-DVKAIVIACNTATARSLVEAQEKY-DIPIIGVIEAGARTAAASTKNGKVGIIGTEGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I + ++ + + VEE ++ K+ E E K Sbjct: 121 IKSKAYNAEIKKIDKRIKVYGKACSLFVPIVEEGWANTEVARLTAKE----YLKELEEKD 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250 D IVL CTHYPL+ + V ++ + A + +L N T+ + Sbjct: 177 VDSIVLGCTHYPLLKRTIGEEVGMEVKLVNPARETAIDLKNILIEKNLLNTKEELGECNY 236 Query: 251 FLSGKPDIA 259 F+S + Sbjct: 237 FVSDINEKF 245 >gi|282916399|ref|ZP_06324161.1| glutamate racemase [Staphylococcus aureus subsp. aureus D139] gi|282319839|gb|EFB50187.1| glutamate racemase [Staphylococcus aureus subsp. aureus D139] Length = 266 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 7/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG +K+ + + + Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGQCPYGPRPGEQVKQYTVEIARKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 ++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I +H V+ VE+ + I Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249 +D ++L CTHYPL+ + + AR LL N H + DH Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFDGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F +G + + L Sbjct: 236 FFATGDTTHITNIIKEWLNLS 256 >gi|302529722|ref|ZP_07282064.1| glutamate racemase [Streptomyces sp. AA4] gi|302438617|gb|EFL10433.1| glutamate racemase [Streptomyces sp. AA4] Length = 266 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 102/262 (38%), Gaps = 7/262 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 I +FDSG+GGL V + + L+P YV D PYG ++ + Sbjct: 1 MSSPDAPIGVFDSGVGGLTVARSILELLPAEQLRYVGDTARNPYGPLPIATAREYALAAL 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D+++ L VIACNTA + R + +PA ++AA T +G + ++ T Sbjct: 61 DDMVESGVKAL-VIACNTASAACLRDARERYDVPVIEVVLPAARRAAVATHTGRVGLIGT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+R + + + V+ VE +I +G Sbjct: 120 EGTVRSRAYDDAFAA-APDVRLTSVACPRFVDFVERGIT----TGRQILGLAQGYLQPLL 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDD 247 D ++L CTHYPL+ V + + V + ++D A+ +L ++ R Sbjct: 175 EAEVDTLILGCTHYPLLSGVLQIVMGQDVTLVSSADETAKDLYRVLTELDLLAERDEPPK 234 Query: 248 HALFLSGKPDIAMRRLMQGFGL 269 H +G P+ R + G Sbjct: 235 HEFLATGSPEPFARLAQRFMGF 256 >gi|110800511|ref|YP_697257.1| glutamate racemase [Clostridium perfringens ATCC 13124] gi|168209809|ref|ZP_02635434.1| glutamate racemase [Clostridium perfringens B str. ATCC 3626] gi|123049548|sp|Q0TM83|MURI_CLOP1 RecName: Full=Glutamate racemase gi|110675158|gb|ABG84145.1| glutamate racemase [Clostridium perfringens ATCC 13124] gi|170712130|gb|EDT24312.1| glutamate racemase [Clostridium perfringens B str. ATCC 3626] Length = 260 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 6/242 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GGL VL+K +MP ++IY D PYG ++ ++ Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + NL+ Y + + L +E ++ +++K + + Sbjct: 126 NQEKFKNLMDKYGEHREVIPLPCPGLVEFIEAG----DLEGEDVKNFLREKLNPYMDREI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251 IVL CTHYP + V + + VD +D S R + L N +++ + +F Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241 Query: 252 LS 253 S Sbjct: 242 NS 243 >gi|170077204|ref|YP_001733842.1| glutamate racemase [Synechococcus sp. PCC 7002] gi|229486281|sp|B1XPV8|MURI_SYNP2 RecName: Full=Glutamate racemase gi|169884873|gb|ACA98586.1| glutamate racemase [Synechococcus sp. PCC 7002] Length = 279 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 9/262 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + Q+ I IFDSG+GG+ VL+ + +P+ IY AD PYG+ L + + + Sbjct: 1 MGNQQQHPIGIFDSGLGGITVLRALYRQLPQESIIYFADTARLPYGDRSPEELIQYVREI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 + + + + V+ACNT+ + D +RS F + LG + P + A +Q I ++ Sbjct: 61 LTWM-EAQGVKMVVMACNTSSAIALDVIRSEFKT-PVLGLILPGARGAV--SQGKRIGVI 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT+ N I + + + +E +I + K+ ++ Sbjct: 117 ATQATVNSGAYENAILEANPEAAVWQMPCPEFVPLIEAN----RINDPHTKRIVQKRLQP 172 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D +V CTHY + V + + P V +D ++ + L + + Sbjct: 173 LLEQGIDTLVYGCTHYRHLSGVIQSILPSHVICVDPAEYVVSATEQELELMGWKNPQSPL 232 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 +SG PD + G Sbjct: 233 PTRFAVSGCPDQFAQSAKGWLG 254 >gi|240169479|ref|ZP_04748138.1| glutamate racemase [Mycobacterium kansasii ATCC 12478] Length = 271 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + IFDSG+GGL V + + +P+ IYV D PYG ++ + + D++D Sbjct: 6 APVGIFDSGVGGLTVARAIIDQLPDEDIIYVGDTGNGPYGPLTIPEIRAHALAIGDDLVD 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + VL VIACN+A + R + +PA+++A A T++G I ++ T AT+ Sbjct: 66 RGVKVL-VIACNSASAACLRDARERYDVPVVEVILPAVRRAVAATRNGRIGVIGTRATIT 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + I V+ VE + ++ EG + D Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAGVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251 +VL CTHYPL+ + + V + +++ A+ +L + + + Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGDHVTLVSSAEETAKEVLRVLTQSDLLRPHDAPPATRVFE 239 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P+ R + G Sbjct: 240 ATGDPEAFTRLAARFLG 256 >gi|311741210|ref|ZP_07715034.1| glutamate racemase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303380|gb|EFQ79459.1| glutamate racemase [Corynebacterium pseudogenitalium ATCC 33035] Length = 259 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V + + +P IY D PYG ++ + +++ Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPHESVIYTGDTAHSPYGPRPISEVRAFSQGVADRLVE 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + VIACNTA + R + PA+++A + T++G I ++ T T++ Sbjct: 66 RG-CKMLVIACNTATAAFLHDARERYDIPIVEVIRPAVRRAMSTTRNGKIGVIGTEGTIK 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +L + + + VE + +I EG + + D Sbjct: 125 SGAYQDLF-ALNPKVQAFATACPDFVPFVERGITAGR----QILGVAEGYLAPLQAQGVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252 +VL CTHYPL+ + + V + +S+ + +L + H Sbjct: 180 TLVLGCTHYPLLTGIIQLAMGDNVSLVTSSEETTKDVMRILTETDMLAPAENQPVHTFES 239 Query: 253 SGKPDIAMRRLMQGFG 268 +G P+ R + G Sbjct: 240 TGDPEAFARLAARFLG 255 >gi|118470579|ref|YP_889158.1| glutamate racemase [Mycobacterium smegmatis str. MC2 155] gi|166231042|sp|A0R1X0|MURI_MYCS2 RecName: Full=Glutamate racemase gi|118171866|gb|ABK72762.1| glutamate racemase [Mycobacterium smegmatis str. MC2 155] Length = 277 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 12/261 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ Sbjct: 6 APIGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHSLAIGDDLVS 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA + + R + + + + PA+++A A T++G I ++ T AT+ Sbjct: 66 RGVKAL-VIACNTASSACLRDARERYSPVPVVEVILPAVRRAVAATRNGRIGVIGTQATI 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + V+ VE + ++ EG + Sbjct: 125 ASGAYQDAFAA-ARDTEVFTVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQLAEV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----- 247 D +VL CTHYP++ + + V + +++ A+ +L ++ + D Sbjct: 180 DTLVLGCTHYPMLSGLIQLAMGDNVTLVSSAEETAKDLLRVLTELDLLRPHPDDPSVTAV 239 Query: 248 HALFLSGKPDIAMRRLMQGFG 268 +G P+ + G Sbjct: 240 RRFEATGDPEAFTALAARFLG 260 >gi|332704699|ref|ZP_08424787.1| Glutamate racemase [Desulfovibrio africanus str. Walvis Bay] gi|332554848|gb|EGJ51892.1| Glutamate racemase [Desulfovibrio africanus str. Walvis Bay] Length = 282 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 5/251 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG+GGL VL+ +R L+P F Y+ D PYG ++ + + ++ + Sbjct: 13 PIGVFDSGVGGLTVLRALRELLPGEDFRYLGDTARLPYGTKSRESVVRYALQSSRHLVAQ 72 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 L V+ACNTA +L +P + +G V P + A +G I++++T +T++ Sbjct: 73 G-VKLLVVACNTATAAALPDLAEAYPGIPVVGVVRPGARAGCALNTNGRIAVMATESTVQ 131 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I I + + + EE + E +K+ ++ F E + Sbjct: 132 GGAYQAAIRELCPNMRIEAAACSLFVALAEEGWTEGPLVEGIVKRYLDPLFARFEDQPPT 191 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFDDHAL 250 +VL CTH+P++ +++ V +D++ + A+ R LL R R Sbjct: 192 SLVLGCTHFPMLAGAIAKVAGEGVTVIDSAVTTAQEVRELLVRHGLGHPEPDRPDAKTYF 251 Query: 251 FLSGKPDIAMR 261 F + + R Sbjct: 252 FATDGRERFAR 262 >gi|255324315|ref|ZP_05365436.1| glutamate racemase [Corynebacterium tuberculostearicum SK141] gi|255298645|gb|EET77941.1| glutamate racemase [Corynebacterium tuberculostearicum SK141] Length = 259 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSG+GGL V + + +P IY D PYG ++ + +++ Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPHESVIYTGDTAHSPYGPRPISEVRAFSQDVADRLVE 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + VIACNTA + R + PA+++A + T++G I ++ T T++ Sbjct: 66 RG-CKMLVIACNTATAAFLHDARERYDIPIVEVIRPAVRRAMSTTRNGKIGVIGTEGTIK 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +L + + + VE + +I EG + + D Sbjct: 125 SGAYQDLF-ALNPKVQAFATACPDFVPFVERGITAGR----QILGVAEGYLAPLQEQGVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252 +VL CTHYPL+ + + V + +S+ + +L + H Sbjct: 180 TLVLGCTHYPLLTGIIQLAMGDNVSLVTSSEETTKDVMRILTETDMLAPAENQPVHTFES 239 Query: 253 SGKPDIAMRRLMQGFG 268 +G P+ R + G Sbjct: 240 TGDPEAFARLATRFLG 255 >gi|154707217|ref|YP_001425115.1| glutamate racemase [Coxiella burnetii Dugway 5J108-111] gi|154356503|gb|ABS77965.1| glutamate racemase [Coxiella burnetii Dugway 5J108-111] Length = 280 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 4/256 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S IL Sbjct: 5 RPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS-ILI 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T+ Sbjct: 64 AQNIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTI 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + + Q I + + + EE +I KK +E + Sbjct: 124 QSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPIINGY--HQC 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTH+P+++ + ++ ++++ + A + +L + N + + Sbjct: 182 DSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTLSFLV 241 Query: 253 SGKPDIAMRRLMQGFG 268 + P+ R FG Sbjct: 242 TDSPERFTRIGEIFFG 257 >gi|332686497|ref|YP_004456271.1| glutamate racemase [Melissococcus plutonius ATCC 35311] gi|332370506|dbj|BAK21462.1| glutamate racemase [Melissococcus plutonius ATCC 35311] Length = 273 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 10/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I + DSG+GGL V++++ +P +FIY+ D PYG+ + + + + +L Sbjct: 4 QYAIGLIDSGVGGLTVVKELCRQLPNENFIYLGDTAHCPYGSKPTEQVIQYTWQMTNFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K L VIACNTA + +E+++T + +G + P + A A T+S I ++ T T Sbjct: 64 RKK-IKLLVIACNTATAAVLEEIKNTL-DIPVIGVIAPGARAAIAATKSQRIGVIGTEGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I V + + ++ VE ++ + K + K+ Sbjct: 122 IKSQAYEKNIKLLVEKSFVSCLACPSFVPLVEMGNYHTIKAKEIVTKT----LAPLKLKQ 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDH 248 D +VL CTHYPL+ + V +D S + + LL N ++QT Sbjct: 178 LDTLVLGCTHYPLLRSFIQTAIGSQVTLIDPSIETVKEIQDLLAHSNKLTSNQTNNNPSR 237 Query: 249 ALFLSGKPDIAMRRLMQGF 267 + +G + + Sbjct: 238 KFYTTGSIKTFEKIAIDWL 256 >gi|330941681|gb|EGH44456.1| glutamate racemase [Pseudomonas syringae pv. pisi str. 1704B] Length = 270 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 5/251 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + IFDSG+GGL VL ++R L+ +Y+AD PYG + +R + + Sbjct: 10 DAPVGIFDSGVGGLSVLNEIRQLLLSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 69 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL Sbjct: 70 EQGAKAL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + + + L +E + +I++ ++ R Sbjct: 129 QSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARC 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D + Sbjct: 185 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVARDTVYWS 244 Query: 253 SGKPDIAMRRL 263 S PD + L Sbjct: 245 SDIPDNFRKIL 255 >gi|266620112|ref|ZP_06113047.1| glutamate racemase [Clostridium hathewayi DSM 13479] gi|288868341|gb|EFD00640.1| glutamate racemase [Clostridium hathewayi DSM 13479] Length = 272 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 10/252 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL V +++ MPE +Y D PYGN + + + + +L Sbjct: 5 NSPIGVFDSGVGGLTVAREIMRQMPEERIVYFGDTARVPYGNKSGNTVIRFTRQIIRFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + VIACNTA + + + +G + A + A T++G I I+ T T Sbjct: 65 TQ-DVKAIVIACNTATAYALEAVEGEL-DIPIIGVIHAGARTATQATKNGKIGIIGTEGT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + ++ + +L VEE + ++ E +GK Sbjct: 123 IRSGVYTKVMMEMRPDIEVTGKPCPLLVPLVEEGLLHDSVTDE----IASRYLSELKGKY 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-- 249 D +VL CTHYPL+ +L V ++ + A + +L + + + Sbjct: 179 IDTLVLGCTHYPLLRSTVGRLMGPEVTLVNPAYETALELKSVLTEADLLCSGPAEGQEQY 238 Query: 250 -LFLSGKPDIAM 260 ++S + Sbjct: 239 LFYVSDLAEKFT 250 >gi|325286852|ref|YP_004262642.1| Glutamate racemase [Cellulophaga lytica DSM 7489] gi|324322306|gb|ADY29771.1| Glutamate racemase [Cellulophaga lytica DSM 7489] Length = 263 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 124/255 (48%), Gaps = 7/255 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I +FDSG+GG + +++ L+P + IY+AD PYG + RL +++L Sbjct: 3 NNPIGVFDSGVGGTSIWKEIHKLLPLENTIYLADSANAPYGKKSPEDIL-RLSIKNTELL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + V+ACNTA T LR T+ +++F+G PAIK A + S + +L+T TL Sbjct: 62 LQHNCKIIVVACNTATTNAITYLRETYTNVSFIGIEPAIKPAVLQSNSKTVGVLATKGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + ++ I L +E E K ++ + Sbjct: 122 SSSLFHSTVKNHAEGIKIIEKEGEGLVPLIESGKA----TSVEAKDLLKTFLEPMLEQNI 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 D +VL CTHYP ++ V ++L P V+ +D+ +++AR+ + +L R N V H + Sbjct: 178 DYLVLGCTHYPYLIPVLKELLPAHVNIIDSGEAVARQTKAILERENLLNRGNVASSHKFY 237 Query: 252 LSGKPDIAMRRLMQG 266 + I +R ++G Sbjct: 238 TNADVSI-LRSFLKG 251 >gi|300714768|ref|YP_003739571.1| glutamate racemase [Erwinia billingiae Eb661] gi|299060604|emb|CAX57711.1| Glutamate racemase [Erwinia billingiae Eb661] Length = 260 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 79/255 (30%), Positives = 138/255 (54%), Gaps = 4/255 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V +++R LMP+ H++Y D+V FPYG + + R++ + + +Y Sbjct: 2 LVFDSGVGGLSVYEELRQLMPDLHYLYAFDNVAFPYGEKSEEFIVHRVVDIVEAVTRRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L VIACN+A T+ LR+ F +G VPAIK AA T++G++ +L+T T++R Y Sbjct: 62 LALVVIACNSASTVTLPALRARF-DFPVVGVVPAIKPAARLTRNGIVGLLATRGTVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T L+ + S+C ++ S L E G + +E+++ ++ KE D +V Sbjct: 121 THELVARFASECKTEMLGSAELVELAEAKLQGKPVPLEEVRRILQPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS-GK 255 L CTH+PL+ +Q+ P +D+ +IARR LL + + A + + Sbjct: 179 LGCTHFPLLNEELQQVLPEGTRLVDSGAAIARRTAWLLENESPAAFSADSNIAFCMDITE 238 Query: 256 PDIAMRRLMQGFGLK 270 + + +++ +G + Sbjct: 239 QAVQLMPVLKRYGFE 253 >gi|227354692|ref|ZP_03839111.1| glutamate racemase [Proteus mirabilis ATCC 29906] gi|227165202|gb|EEI50027.1| glutamate racemase [Proteus mirabilis ATCC 29906] Length = 288 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 83/265 (31%), Positives = 142/265 (53%), Gaps = 3/265 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + ++L+FDSG+GGL + +++R +P+ H+IYV D+ FPYG + +R++ + Sbjct: 20 AQSTANPTVLVFDSGVGGLSIYREIREKLPDAHYIYVFDNEAFPYGEKPQEFIIERVVRI 79 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 S + +++ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+ Sbjct: 80 VSAVAQQHELAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLA 139 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++R YT LI + ++C +HL+ S L E+ G K+ DE+++ + K Sbjct: 140 TRATVKRPYTHELIERFATECKVHLLGSAELVELAEKKLHGEKVSCDELRRILAPWLKMK 199 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D +VL CTH+PL+ + P +D+ +IARR L+ + + Sbjct: 200 EP--PDTVVLGCTHFPLLEEELLSVLPDGTRIIDSGGAIARRTAWLVVNQDKIRGSKEIS 257 Query: 248 HALFLSGKP-DIAMRRLMQGFGLKS 271 A L ++ ++ FG K+ Sbjct: 258 FAYCLKEDEYSELLKPVLADFGFKT 282 >gi|319953665|ref|YP_004164932.1| glutamate racemase [Cellulophaga algicola DSM 14237] gi|319422325|gb|ADV49434.1| Glutamate racemase [Cellulophaga algicola DSM 14237] Length = 259 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 6/245 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GG + +++ L+P IY+AD PYG + + +L Sbjct: 4 QPIGIFDSGVGGTSIWKEIHKLLPNEDTIYLADSKNAPYGEKSADEILNLSIKNTEFLL- 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + VIACNTA T LR T+ + F+G PAIK AA ++S I +L+T TL Sbjct: 63 NLGCKIIVIACNTATTNAIAYLRKTY-DIPFIGIEPAIKPAALNSKSKTIGVLATKGTLT 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + +Y + L +E K+ E++ + + D Sbjct: 122 SALFNTTSKNYSEGITVIDQDGEGLVPLIESG----KVNGVEVRNLLLKYLNPMIHQGID 177 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP ++ V +++ V +D+ +++A+ + +L + + H + + Sbjct: 178 YLVLGCTHYPYLIPVIQEIVSDKVTIIDSGEAVAKHTKSILEKFKLSASDQLSKHQFYSN 237 Query: 254 GKPDI 258 D Sbjct: 238 KNADE 242 >gi|212213193|ref|YP_002304129.1| glutamate racemase [Coxiella burnetii CbuG_Q212] gi|212011603|gb|ACJ18984.1| glutamate racemase [Coxiella burnetii CbuG_Q212] Length = 280 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 4/256 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S IL Sbjct: 5 RPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS-ILI 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T+ Sbjct: 64 TQNIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTI 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + + Q I + + + EE +I KK +E + Sbjct: 124 QSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPIINGY--HQC 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTH+P+++ + ++ ++++ + A + +L + N + + Sbjct: 182 DSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTLSFLV 241 Query: 253 SGKPDIAMRRLMQGFG 268 + P+ R FG Sbjct: 242 TDSPERFTRIGEIFFG 257 >gi|268593423|ref|ZP_06127644.1| glutamate racemase [Providencia rettgeri DSM 1131] gi|291311122|gb|EFE51575.1| glutamate racemase [Providencia rettgeri DSM 1131] Length = 287 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 135/260 (51%), Gaps = 4/260 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +IL+FDSG+GGL V ++++ ++P H+IY D+ FPYG + + R+ + + I Sbjct: 25 RPTILVFDSGVGGLSVYREVKKMIPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQIVNAIA 84 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K+ +++IACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+ Sbjct: 85 AKHPLTIAIIACNTASTVSLPNLRAHF-TFPVVGVVPAIKPATKLTRNGVVGLLATKGTV 143 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + C + + S L E G + DE+ + + E Sbjct: 144 NREYTKELIERFATDCKVISLGSAELVQLAERKLHGETLPLDEVAQTVRPWIRMPEP--P 201 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTH+PL++ ++ P ++D+ +IARR L+ ++ A L Sbjct: 202 DTVILGCTHFPLLIEELEKVLPNGTRFIDSGSAIARRTVWLINNQEEIANSEEENFAYCL 261 Query: 253 S-GKPDIAMRRLMQGFGLKS 271 ++ +++ G K+ Sbjct: 262 LMDDNAKGLQPVLEAEGFKT 281 >gi|258515013|ref|YP_003191235.1| glutamate racemase [Desulfotomaculum acetoxidans DSM 771] gi|257778718|gb|ACV62612.1| glutamate racemase [Desulfotomaculum acetoxidans DSM 771] Length = 266 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 6/254 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I +FDSG+GGL +++++R L+PE IY AD PYG ++ R + +L Sbjct: 5 AAIGLFDSGVGGLSIMKEVRKLLPEEDLIYFADSAYCPYGIKTPEVIRARCFSICDFLL- 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K L V+A NT D +R + + +G PAIK AA +++G I IL+T T+ Sbjct: 64 KEGVKLIVVASNTTSVAGLDLIRKHYR-IPIVGVEPAIKPAAELSRNGKIGILATGVTIN 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 S+L+ + S + L VEE K+ + + + +D Sbjct: 123 GERFSSLVERFGSNIEVFTQPCPGLVELVEEG----KLDCPQTEALLHRYMDPMLVHGSD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTHYP + + +++ + +D +++AR+ ++ +N T + S Sbjct: 179 TIVLGCTHYPFLRSLVEKIAGPQITVIDTGEAVARQVSRIVNTLNQISTGKQGKEIFYTS 238 Query: 254 GKPDIAMRRLMQGF 267 G + + + Sbjct: 239 GSTAKVTPIIQELW 252 >gi|327395709|dbj|BAK13131.1| glutamate racemase MurI [Pantoea ananatis AJ13355] Length = 241 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 79/227 (34%), Positives = 132/227 (58%), Gaps = 3/227 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKTETFIVERVVAIVD 77 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 I ++ L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T Sbjct: 78 AITRRHPISLVIIACNTASTVTLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+RR+YT L+ + C I ++ S L E G ++ DEI++ ++ + Sbjct: 137 ATVRRSYTHELVSQFAKTCKIEMLGSAELVELAEAKLHGEEVSIDEIRRIVQPWL--RMA 194 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + D +VL CTH+PL+ +Q+ P +D+ +IARR LL + Sbjct: 195 EPPDTVVLGCTHFPLLRDELQQILPEGTRLIDSGAAIARRTAWLLGK 241 >gi|302384966|ref|YP_003820788.1| glutamate racemase [Clostridium saccharolyticum WM1] gi|302195594|gb|ADL03165.1| glutamate racemase [Clostridium saccharolyticum WM1] Length = 272 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 104/256 (40%), Gaps = 10/256 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL V +++ MP+ +Y D PYG+ + + + +L Sbjct: 5 NSPIGVFDSGVGGLTVAREIMRQMPDERIVYFGDTARVPYGSKSCSTVIRFTRQIIRFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + VIACNTA + + + +G + A + A T++G I I+ T T Sbjct: 65 TQ-DVKAIVIACNTATACALEAVEKEV-EIPIVGVIHAGARTAVDSTKNGKIGIIGTEGT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + ++ + +L VEE + ++ E +GK Sbjct: 123 IRSGVYTRVMKEMREDIDVTGKPCPLLVPLVEEGLLHDSVTDE----IASRYLSELKGKY 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDH 248 D +VL CTHYPL+ +L V ++ + A + +L + ++ + + Sbjct: 179 IDTLVLGCTHYPLLRSTVGRLMGPEVTLVNPAYETALELKQILEGKDLLCGQESNDVEKY 238 Query: 249 ALFLSGKPDIAMRRLM 264 ++S + Sbjct: 239 HFYVSDLAEKFTSFAA 254 >gi|259906847|ref|YP_002647203.1| glutamate racemase [Erwinia pyrifoliae Ep1/96] gi|224962469|emb|CAX53924.1| Glutamate racemase [Erwinia pyrifoliae Ep1/96] gi|283476639|emb|CAY72467.1| murI [Erwinia pyrifoliae DSM 12163] Length = 283 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 4/264 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + ++LIFDSG+GGL V ++ L+P+ H++Y D+V FPYG + + +R+M + Sbjct: 16 APSVPRPTVLIFDSGVGGLSVYNEICALLPDLHYLYAFDNVAFPYGEKSEEFIVERVMAI 75 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+ Sbjct: 76 VTAVTRLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLA 134 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++R YT LI + +C ++ S L E G + +E+++ ++ Sbjct: 135 TRGTVKRPYTHELIARFAGECKTEMLGSGELVEIAEAKLHGQPVALEEVRRILQPWLRMP 194 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ Sbjct: 195 EP--PDTVVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPEALSADDN 252 Query: 248 HALFLS-GKPDIAMRRLMQGFGLK 270 AL L + + + ++Q +G K Sbjct: 253 MALCLDITEQAVQLIPVLQRYGFK 276 >gi|16330377|ref|NP_441105.1| glutamate racemase [Synechocystis sp. PCC 6803] gi|2492985|sp|P73737|MURI_SYNY3 RecName: Full=Glutamate racemase gi|1652867|dbj|BAA17785.1| glutamate racemase [Synechocystis sp. PCC 6803] Length = 279 Score = 291 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 9/263 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + ++ I +FDSG+GGL VL+++ +P+ +Y D PYG + + + + Sbjct: 1 MREPQRSRIGVFDSGVGGLTVLRELYRQLPKESILYFGDTARLPYGKRSPQVILQYVREI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 + + + + ++ACNT+ L + ++ F +M LG + P + A Q I ++ Sbjct: 61 LTWM-AAEEVKMVIMACNTSSALALETVQQEF-NMPILGVILPGARAAVR--QGRRIGVI 116 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 STPAT + IH + ++ +E+ ++ + + +G Sbjct: 117 STPATAASNAYRHAIHEITPDALVWQMACPEFVPLIEQN----RLHDPYTLEVAKGYLQP 172 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D +V CTHY + VF+Q+ P + +D + + + AR L + + + Sbjct: 173 LLDADIDTLVFGCTHYRHLTPVFQQILPSHIRLVDPASHVVKAARQELEVMGLRNSEMSI 232 Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269 +SG P Q G Sbjct: 233 ATRFTVSGCPQQFAELSHQWLGF 255 >gi|254244446|ref|ZP_04937768.1| glutamate racemase [Pseudomonas aeruginosa 2192] gi|126197824|gb|EAZ61887.1| glutamate racemase [Pseudomonas aeruginosa 2192] Length = 265 Score = 291 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 5/256 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ +FDSG+GG VL+++R +P +YVAD+ PYG +++R + +L Sbjct: 5 SAAVGVFDSGVGGFSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L R+E + + + +E + Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + +L P + +D ++AR+ +L + + Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239 Query: 253 SGKPDIAMRRLMQGFG 268 S P+ R L +G Sbjct: 240 SALPEEMERILPILWG 255 >gi|153208641|ref|ZP_01946893.1| glutamate racemase [Coxiella burnetii 'MSU Goat Q177'] gi|165919769|ref|ZP_02219512.1| glutamate racemase [Coxiella burnetii RSA 334] gi|212218133|ref|YP_002304920.1| glutamate racemase [Coxiella burnetii CbuK_Q154] gi|120575827|gb|EAX32451.1| glutamate racemase [Coxiella burnetii 'MSU Goat Q177'] gi|165916852|gb|EDR35456.1| glutamate racemase [Coxiella burnetii RSA 334] gi|212012395|gb|ACJ19775.1| glutamate racemase [Coxiella burnetii CbuK_Q154] Length = 280 Score = 291 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 4/256 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S IL Sbjct: 5 RPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS-ILI 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T+ Sbjct: 64 AQNIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTI 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + + Q I + + + EE +I KK +E + Sbjct: 124 QSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPII--NVYHQC 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTH+P+++ + ++ ++++ + A + +L + N + + Sbjct: 182 DSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTLSFLV 241 Query: 253 SGKPDIAMRRLMQGFG 268 + P+ R FG Sbjct: 242 TDSPERFTRIGEIFFG 257 >gi|154250720|ref|YP_001411544.1| glutamate racemase [Parvibaculum lavamentivorans DS-1] gi|154154670|gb|ABS61887.1| glutamate racemase [Parvibaculum lavamentivorans DS-1] Length = 276 Score = 291 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 5/253 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + +I +FDSGIGG+ VL+ +R +P +Y+ D PYG + Sbjct: 4 KSERAIGVFDSGIGGITVLKALRAALPHEDLVYLGDTARLPYGTKSPETVTAYATQATKH 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 +++ + + VIACNTA + L + +G + P K A T+SG I ++ T Sbjct: 64 LME-HGVKMVVIACNTASAVAIGPLTEALKPLPVIGVIEPGAKAGVAATKSGRIGVIGTE 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+R IH+ + + + + EE ++ E K+ + F + Sbjct: 123 ATVRGGAYMRAIHALDPKAQVTQAPCGLFVTLAEEGWTSGEVAEAAAKRYLAPLFKGRNA 182 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248 D +VL CTH+P++ + +++ V +D++ + A+ L R Sbjct: 183 --PDTLVLGCTHFPVLARIIKKVVGKNVKLVDSAATTAKAVEAALAEQGLASRRRGKGKT 240 Query: 249 ALFLSGKPDIAMR 261 + + R Sbjct: 241 RFLATDSAERFAR 253 >gi|168205832|ref|ZP_02631837.1| glutamate racemase [Clostridium perfringens E str. JGS1987] gi|169343233|ref|ZP_02864244.1| glutamate racemase [Clostridium perfringens C str. JGS1495] gi|169298531|gb|EDS80612.1| glutamate racemase [Clostridium perfringens C str. JGS1495] gi|170662679|gb|EDT15362.1| glutamate racemase [Clostridium perfringens E str. JGS1987] Length = 260 Score = 291 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 6/242 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GGL VL+K +MP ++IY D PYG ++ ++ Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + NL+ Y + + L +E ++ +++K + + Sbjct: 126 TQEKFKNLMDKYGEHREVIPLPCPGLVEFIEAG----DLEGEDVKNFLREKLNPYMDREI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251 IVL CTHYP + V + + VD +D S R + L N +++ + +F Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241 Query: 252 LS 253 S Sbjct: 242 NS 243 >gi|313107324|ref|ZP_07793519.1| glutamate racemase [Pseudomonas aeruginosa 39016] gi|310880021|gb|EFQ38615.1| glutamate racemase [Pseudomonas aeruginosa 39016] Length = 265 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGGVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L R+E + + + +E + Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + +L P + +D ++AR+ +L + + Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239 Query: 253 SGKPDIAMRRLMQGFG 268 S P+ R L +G Sbjct: 240 SALPEEMERILPILWG 255 >gi|197287060|ref|YP_002152932.1| glutamate racemase [Proteus mirabilis HI4320] gi|229486247|sp|B4F1H6|MURI_PROMH RecName: Full=Glutamate racemase gi|194684547|emb|CAR46364.1| glutamate racemase [Proteus mirabilis HI4320] Length = 288 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 83/264 (31%), Positives = 141/264 (53%), Gaps = 3/264 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + ++L+FDSG+GGL + +++R +P+ H+IYV D+ FPYG + +R++ + Sbjct: 20 AQSTANPTVLVFDSGVGGLSIYREIREKLPDAHYIYVFDNEAFPYGEKPQEFIIERVVRI 79 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 S + +++ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+ Sbjct: 80 VSAVAQQHELAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLA 139 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++R YT LI + ++C +HL+ S L E+ G K+ DE+++ + K Sbjct: 140 TRATVKRPYTHELIERFATECKVHLLGSAELVELAEKKLHGEKVSCDELRRILAPWLKMK 199 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D +VL CTH+PL+ + P +D+ +IARR L+ + + Sbjct: 200 EP--PDTVVLGCTHFPLLEEELLSVLPDGTRIIDSGGAIARRTAWLVVNQDKIRGSKEIS 257 Query: 248 HALFLSGKP-DIAMRRLMQGFGLK 270 A L ++ ++ FG K Sbjct: 258 FAYCLKEDEYSELLKPVLADFGFK 281 >gi|331701298|ref|YP_004398257.1| glutamate racemase [Lactobacillus buchneri NRRL B-30929] gi|329128641|gb|AEB73194.1| Glutamate racemase [Lactobacillus buchneri NRRL B-30929] Length = 264 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 112/268 (41%), Gaps = 16/268 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+++ ++P +I++ D PYG ++K Sbjct: 1 MDNRP--------IGVMDSGVGGLTVLKEITKILPNESYIFIGDQANLPYGQKSSETVRK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + ++++ + VIACNTA + L+ P + +G + P + A ++SG Sbjct: 53 LTKRIADYLVEQ-NIKMFVIACNTATAAAYEYLKKILP-IPVIGVIEPGAQMAVEASKSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T T+R LI + + + VEE G E + + Sbjct: 111 EIGVIATNGTVRSGDYQRLIKQANRSAVVSSLGCPEFVTMVEEGLAGTV----EAQVAVN 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 K D +V+ CTH+P++ + + + V +D + A++ + L + Sbjct: 167 NRLAWFMDKPIDTLVMGCTHFPILKNEIQNVMGNAVTLIDPGVATAQQVKAKLAAHDGFA 226 Query: 242 TRVFDD-HALFLSGKPDIAMRRLMQGFG 268 + +G P + + G Sbjct: 227 PAQKQRVRRFYTTGNPADFAKVADKLLG 254 >gi|114045687|ref|YP_736237.1| glutamate racemase [Shewanella sp. MR-7] gi|122945064|sp|Q0I0C5|MURI_SHESR RecName: Full=Glutamate racemase gi|113887129|gb|ABI41180.1| glutamate racemase [Shewanella sp. MR-7] Length = 272 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 133/266 (50%), Gaps = 11/266 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R L+P +++ Y+ D+ PYG E+ L + L + Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHNYCYLFDNARLPYGELEEQELISGCVALIDQV 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + CH+ L S L E+ ++ + Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQKIATGQLD----MARLAQVLSPIVEAD 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ------TRVF 245 DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q R Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGKGVTLLDSGEAIAKRVKTLLAETKSEQQVQEDANRDS 235 Query: 246 DDHALFLSGKPDIAMRRLMQGFGLKS 271 A + + + ++ G + Sbjct: 236 VMQAFYTKAEISEGLASMLVDCGFST 261 >gi|282895562|ref|ZP_06303696.1| Glutamate racemase [Raphidiopsis brookii D9] gi|281199402|gb|EFA74266.1| Glutamate racemase [Raphidiopsis brookii D9] Length = 292 Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 9/262 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E+ ++ I +FDSG+GGL VL+++ +P IY D PYG + + + Sbjct: 21 EEIPKSPIGVFDSGVGGLTVLRQVYQQLPNESVIYFGDTAHLPYGIRSQKEILGYVREIL 80 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + + ++ + ++ACNT+ L + +R + LG + PA K A I +++ Sbjct: 81 NWM-EQQGVKMVIMACNTSSALTLETVRLEYK-FPILGMISPATKFAVNV--GKRIGVIA 136 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TPAT + I + VS +E+ ++ + + Sbjct: 137 TPATAKSNAYRQAIMELKPNVQVWQVSCPEFVPLIEQN----RLHDPYTLAVAKSYLEPL 192 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + D ++ CTHYPL+ + + L P + +D + + R + L +N + Sbjct: 193 LAQEIDTLIYGCTHYPLLEPIIKTLIPNHIHLVDPAVHVVRVCQRELEILNIKNHLLPMP 252 Query: 248 HALFLSGKPDIAMRRLMQGFGL 269 +SG P + G Sbjct: 253 TRFVVSGSPQHFSQSGTPWLGY 274 >gi|326330807|ref|ZP_08197108.1| glutamate racemase [Nocardioidaceae bacterium Broad-1] gi|325951337|gb|EGD43376.1| glutamate racemase [Nocardioidaceae bacterium Broad-1] Length = 285 Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 101/262 (38%), Gaps = 7/262 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + I IFDSG GGL V + + + +YV D PYG +++ + Sbjct: 16 AQPDRDAPIGIFDSGFGGLTVARSVIDQLAHESILYVGDTARAPYGPRPIAEVREYALEC 75 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 ++++ L VIACN+A + + R + + + + PA ++A A +++G I ++ Sbjct: 76 LDHLVEQGVKAL-VIACNSASAAMLRDARERYKPLPVVEVILPATRRAVAASRTGRIGVI 134 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT + + +H + VE G +E+ Sbjct: 135 CTHATAESMAYDDAFAA-APHVSLHTRACPQFVPFVEAGVTGG----EELLAAAHEYLDP 189 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D ++L CTHYPL+ V + V + +++ A+ +L + + Sbjct: 190 LTSAGVDTLILGCTHYPLLTGVISYVMGDNVTLVSSAEESAKDVYRVLAENDLMREGGEP 249 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 + +G P + G Sbjct: 250 TYTFLTTGNPAEFKAIGARFLG 271 >gi|168217333|ref|ZP_02642958.1| glutamate racemase [Clostridium perfringens NCTC 8239] gi|182380603|gb|EDT78082.1| glutamate racemase [Clostridium perfringens NCTC 8239] Length = 260 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 6/242 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GGL VL+K +MP ++IY D PYG ++ ++ Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+ Y + + L +E ++ +++K + + Sbjct: 126 TQEKFKKLMDKYGEHREVIPLPCPGLVEFIEAG----DLEGEDVKNFLREKLNPYMDREI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251 IVL CTHYP + V + + VD +D S R + L N +++ + +F Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241 Query: 252 LS 253 S Sbjct: 242 NS 243 >gi|289706341|ref|ZP_06502699.1| glutamate racemase [Micrococcus luteus SK58] gi|289556836|gb|EFD50169.1| glutamate racemase [Micrococcus luteus SK58] Length = 310 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 103/276 (37%), Gaps = 16/276 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + I +FDSG+GGL V + + +P +YV D PYG ++ Sbjct: 1 MTGRRTAVDAAAPIGVFDSGVGGLTVARAIMDQLPHESILYVGDTEHSPYGPRPIAEVRA 60 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYT 118 + + +++ + L VIACN+A + + R + + + + PA+++A A T Sbjct: 61 LALAIMDELVARGVKAL-VIACNSASAAVLRDARERYTGGHGIPVIEVIQPAVRRAVAAT 119 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++G I ++ T AT+ + + I V+ VE E+ + Sbjct: 120 RTGRIGVIGTEATVGSRAYEDSFSA-APHLEITSVACPRFVEFVEAGIT----TGPELLE 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTHYPL+ + V + +++ A+ L R+ Sbjct: 175 TAREYTAPLRAAGVDTLVLGCTHYPLLTGALSLVMGEDVTLVSSAEETAKDLYRELVRLG 234 Query: 239 THQTRVFDD------HALFLSGKPDIAMRRLMQGFG 268 H +G PD + G Sbjct: 235 LEHPHSAAGSGQATRHRFAATGDPDHFQALARRFLG 270 >gi|254238598|ref|ZP_04931921.1| glutamate racemase [Pseudomonas aeruginosa C3719] gi|126170529|gb|EAZ56040.1| glutamate racemase [Pseudomonas aeruginosa C3719] Length = 265 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 5/256 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L R+E + + + +E + Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + +L P + +D ++AR+ +L + + Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239 Query: 253 SGKPDIAMRRLMQGFG 268 S + R L +G Sbjct: 240 SALQEEMERILPILWG 255 >gi|306836771|ref|ZP_07469732.1| glutamate racemase [Corynebacterium accolens ATCC 49726] gi|304567358|gb|EFM42962.1| glutamate racemase [Corynebacterium accolens ATCC 49726] Length = 259 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 9/262 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + +P+ IY D PYG ++ + Sbjct: 1 MPNASSPIGIFDSGVGGLTVARAVMEQLPQESVIYKGDTAHGPYGPRPISQVRAFSQDIA 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 +++++ + VIACNTA + R + + L + PA+++A + T++G I ++ Sbjct: 61 DELVERG-CKMLVIACNTATAAFLHDARERY-DIPILEVIRPAVRRAMSTTRNGKIGVIG 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ +L + + VE + +I EG Sbjct: 119 TEGTIKSGAYQDLF-AVNPNVEAVAAACPDFVPFVERGITAGR----QILGVAEGYLAPL 173 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246 + + D +VL CTHYPL+ + + V + +S+ + LL + Sbjct: 174 QAQGVDTLVLGCTHYPLLTGIIQLAMGENVSLVTSSEETTKDVMRLLTETDMLAPEGNQP 233 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 H+ +G P++ + + G Sbjct: 234 VHSFESTGDPEVFAQLATRFLG 255 >gi|118619134|ref|YP_907466.1| glutamate racemase [Mycobacterium ulcerans Agy99] gi|183984029|ref|YP_001852320.1| glutamate racemase MurI [Mycobacterium marinum M] gi|166231044|sp|A0PUH6|MURI_MYCUA RecName: Full=Glutamate racemase gi|229486244|sp|B2HQH3|MURI_MYCMM RecName: Full=Glutamate racemase gi|118571244|gb|ABL05995.1| glutamate racemase MurI [Mycobacterium ulcerans Agy99] gi|183177355|gb|ACC42465.1| glutamate racemase MurI [Mycobacterium marinum M] Length = 271 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ Sbjct: 6 APVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEVRAHALAIGDDLVG 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA + R + +PA+++A A T++G I ++ T AT+ Sbjct: 66 RGVKAL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTRATIT 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + I V+ VE + ++ EG + D Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRSGVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF- 251 +VL CTHYPL+ + + + V + +++ A+ +L + + LF Sbjct: 180 TLVLGCTHYPLLSGLIQLVMGDNVTLVSSAEETAKEVLRVLTERDILRPHDAPPATRLFE 239 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P+ M + G Sbjct: 240 ATGDPEAFMALAARFLG 256 >gi|291299061|ref|YP_003510339.1| glutamate racemase [Stackebrandtia nassauensis DSM 44728] gi|290568281|gb|ADD41246.1| glutamate racemase [Stackebrandtia nassauensis DSM 44728] Length = 277 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 10/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GGL V + +R L+P +YV D PYG +++ + ++ Sbjct: 3 EAPIGIFDSGVGGLTVARAIRDLLPAERLLYVGDTARAPYGPRSIAQIRQYTLDACDYLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + L VIACNTA + +LR F + L + PA ++A T++G + ++ T AT Sbjct: 63 GQGVKAL-VIACNTASSASLADLRERF-DVPVLEVIRPAARRAVTVTRNGRVGVIGTIAT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + HS + V+ VE ++ +G + + Sbjct: 121 VTSGAYGDAFHS-APSVTLTSVACPAFVDFVERGVT----TGRQLLGLAQGYLEPLQRSQ 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFDDHA 249 D +VL CTHYPL+ + + V + +S+ AR +L + T H Sbjct: 176 VDTLVLGCTHYPLLAGLIGLVMGDEVTLVSSSEEAARDVYKVLNERDLLRDNTLPAPAHR 235 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 +G R + GL Sbjct: 236 FGATGDTGAFARLAQRVLGLP 256 >gi|108773872|gb|ABG16391.1| glutamate racemase [Yersinia pestis Nepal516] gi|108778024|gb|ABG12082.1| glutamate racemase [Yersinia pestis Antiqua] gi|145212464|gb|ABP41871.1| glutamate racemase [Yersinia pestis Pestoides F] Length = 291 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 4/264 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + Sbjct: 24 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 83 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+ Sbjct: 84 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 142 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ +YT +LI + + C I L+ S L E G + + +KK + + Sbjct: 143 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 202 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++ Sbjct: 203 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 260 Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270 A ++ D A+ ++Q +G Sbjct: 261 IAYCMALDEDTDALLPVLQSYGFP 284 >gi|227502996|ref|ZP_03933045.1| glutamate racemase [Corynebacterium accolens ATCC 49725] gi|227076057|gb|EEI14020.1| glutamate racemase [Corynebacterium accolens ATCC 49725] Length = 259 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 9/262 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + +P+ IY D PYG ++ + Sbjct: 1 MPNASSPIGIFDSGVGGLTVARAVMEQLPQESVIYKGDTAHGPYGPRPISQVRAFSQDIA 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 +++++ + VIACNTA + R + + L + PA+++A + T++G I ++ Sbjct: 61 DELVERG-CKMLVIACNTATAAFLHDARERY-DIPILEVIRPAVRRAMSTTRNGKIGVIG 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ +L + + VE + +I EG Sbjct: 119 TEGTIKSGAYQDLF-AVNPNVEAVAAACPDFVPFVERGITAGR----QILGVAEGYLAPL 173 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + + D +VL CTHYPL+ + V + +S+ + LL + Sbjct: 174 QAQGVDTLVLGCTHYPLLTGTIQLAMGENVSLVTSSEETTKDVMRLLTETDMLAPEGNQT 233 Query: 248 -HALFLSGKPDIAMRRLMQGFG 268 H+ +G P++ + + G Sbjct: 234 VHSFESTGDPEVFAQLATRFLG 255 >gi|110801992|ref|YP_699819.1| glutamate racemase [Clostridium perfringens SM101] gi|168213495|ref|ZP_02639120.1| glutamate racemase [Clostridium perfringens CPE str. F4969] gi|123145852|sp|Q0SPY8|MURI_CLOPS RecName: Full=Glutamate racemase gi|110682493|gb|ABG85863.1| glutamate racemase [Clostridium perfringens SM101] gi|170715052|gb|EDT27234.1| glutamate racemase [Clostridium perfringens CPE str. F4969] Length = 260 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 5/229 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GGL VL+K +MP ++IY D PYG ++ ++ Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + NL+ Y + + L +E ++ +E+K + + Sbjct: 126 TQEKFKNLMDKYGEHREVIPLPCPGLVEFIEAG----NLEGEEVKNFLREKLNPYMDREI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 IVL CTHYP + V + + VD +D S R + L N Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTIRELKRRLEENNMQS 230 >gi|300741330|ref|ZP_07071351.1| glutamate racemase [Rothia dentocariosa M567] gi|300380515|gb|EFJ77077.1| glutamate racemase [Rothia dentocariosa M567] Length = 346 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 12/268 (4%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I +FDSG+GGL V + + +P IYV D PYG + ++ + Sbjct: 23 PAGPTSSAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 82 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGL 122 + +++D + VIACNTA + + R + + + + PA ++A A T++ Sbjct: 83 IMDELVDSG-VKMLVIACNTASAAVLRDARERYTRHYGIPVIEVIQPAARRALAATRNRK 141 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +++T AT+ + + + V+ VE+ E+ + E Sbjct: 142 IGVIATEATVTSRAYEDTF-AIAPNLMVQSVACPRFVEFVEKGVTSGP----ELLRTAEE 196 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYPL+ + + V + ++D A+ L N Sbjct: 197 YLQPLKDSGVDTLVLGCTHYPLLTGIISYIMGEDVTLVSSADETAKDVYRALLTENIENP 256 Query: 243 --RVFDDHALFLSGKPDIAMRRLMQGFG 268 H +G+ + + G Sbjct: 257 DLETNPHHEFLATGESETFENLARRFLG 284 >gi|170026279|ref|YP_001722784.1| glutamate racemase [Yersinia pseudotuberculosis YPIII] gi|229486286|sp|B1JQ44|MURI_YERPY RecName: Full=Glutamate racemase gi|169752813|gb|ACA70331.1| glutamate racemase [Yersinia pseudotuberculosis YPIII] Length = 287 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 139/264 (52%), Gaps = 4/264 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ + Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+ Sbjct: 80 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ +YT +LI + + C I L+ S L E G + + +KK + + Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 198 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++ Sbjct: 199 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSSQDEN 256 Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270 A ++ D A+ ++Q +G Sbjct: 257 IAYCMALDEDTDALLPVLQSYGFP 280 >gi|21957008|gb|AAM83917.1|AE013632_5 glutamate racemase [Yersinia pestis KIM 10] gi|45437760|gb|AAS63309.1| putative glutamate racemase [Yersinia pestis biovar Microtus str. 91001] Length = 299 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 4/264 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + Sbjct: 32 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 91 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+ Sbjct: 92 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 150 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ +YT +LI + + C I L+ S L E G + + +KK + + Sbjct: 151 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 210 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++ Sbjct: 211 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 268 Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270 A ++ D A+ ++Q +G Sbjct: 269 IAYCMALDEDTDALLPVLQSYGFP 292 >gi|239917359|ref|YP_002956917.1| glutamate racemase [Micrococcus luteus NCTC 2665] gi|281414158|ref|ZP_06245900.1| glutamate racemase [Micrococcus luteus NCTC 2665] gi|239838566|gb|ACS30363.1| glutamate racemase [Micrococcus luteus NCTC 2665] Length = 310 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 103/276 (37%), Gaps = 16/276 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + I +FDSG+GGL V + + +P +YV D PYG ++ Sbjct: 1 MSGRLAAVDATAPIGVFDSGVGGLTVARAIMDQLPHESILYVGDTEHSPYGPRPIAEVRA 60 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYT 118 + + +++ + L VIACN+A + + R + + + + PA+++A A T Sbjct: 61 LALAIMDELVARGVKAL-VIACNSASAAVLRDARERYTGGHGIPVIEVIQPAVRRAVAAT 119 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++G I ++ T AT+ + + I V+ VE E+ + Sbjct: 120 RTGRIGVIGTEATVGSRAYEDSFSA-APHLAITSVACPRFVEFVEAGIT----TGPELLE 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VL CTHYPL+ + V + +++ A+ L R+ Sbjct: 175 TAREYTAPLRAAGVDTLVLGCTHYPLLTGALSLVMGEDVTLVSSAEETAKDLYRELVRLG 234 Query: 239 THQTRVFDD------HALFLSGKPDIAMRRLMQGFG 268 H +G PD + G Sbjct: 235 LEHPHSAAGSGQATRHRFAATGDPDHFQALARRFLG 270 >gi|260890743|ref|ZP_05902006.1| glutamate racemase [Leptotrichia hofstadii F0254] gi|260859621|gb|EEX74121.1| glutamate racemase [Leptotrichia hofstadii F0254] Length = 261 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 106/251 (42%), Gaps = 11/251 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSGIGGL VL+++R ++P Y D PYG + + + +L+K Sbjct: 2 SIGVFDSGIGGLTVLKEIRKVLPNEKIYYFGDTARVPYGEKTKELIIRYSKEIVEFLLEK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133 V+ACNTA L EL+ F + +G + A + A T+S I ++ T AT++ Sbjct: 62 -DVSAIVVACNTATALALKELKEIFK-IPIIGVIEAGARTAINTTKSNEIGVIGTKATIK 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + + + + + VEE K+ IK ++ D Sbjct: 120 SEKYIEEIKLFNPKVKVFQKACPLFVPAVEEGILSGKLVNQIIKTYLDDF-----EGEID 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LF 251 ++L CTHYPL+ ++ P + +D + A + +L + + + + Sbjct: 175 TLILGCTHYPLLKDAISKIYP-DIKIVDPAKETALDLKSILQKNKFLKNDALKNEEVDYY 233 Query: 252 LSGKPDIAMRR 262 ++ + Sbjct: 234 VTDGQEKFKEI 244 >gi|116052807|ref|YP_793124.1| glutamate racemase [Pseudomonas aeruginosa UCBPP-PA14] gi|122257182|sp|Q02G12|MURI_PSEAB RecName: Full=Glutamate racemase gi|115588028|gb|ABJ14043.1| glutamate racemase [Pseudomonas aeruginosa UCBPP-PA14] Length = 265 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVQLVAMEPAVKPAAAATRNGRVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L R+E + + + +E + Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + +L P + +D ++AR+ +L + + Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239 Query: 253 SGKPDIAMRRLMQGFG 268 S P+ R L +G Sbjct: 240 SALPEEMERILPILWG 255 >gi|296111814|ref|YP_003622196.1| glutamate racemase [Leuconostoc kimchii IMSNU 11154] gi|295833346|gb|ADG41227.1| glutamate racemase [Leuconostoc kimchii IMSNU 11154] Length = 280 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 N I + DSG+GGL V++ + +P FI++ D PYG + + + + Sbjct: 2 NKNNPIGMVDSGVGGLTVIKAAQKQLPNEQFIFIGDTARMPYGPRTTDEVIAYTLQMANF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 ++++ L VIACNTA L+ S+ +G + P K A T++ I +++T Sbjct: 62 LVNEKHIKLLVIACNTATARALSVLQDQL-SIPVIGVIQPGAKAAQLATKNKKIGVIATQ 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ +H Y SQ + + VE K DE +K + + Sbjct: 121 GTVTSEAYDVQLHHYNSQITVVSQAEPEFVQTVELN----KYHSDEARKLVNSHLATLKA 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFDD 247 + D ++L CTH+PL+ + V +D+ + + L + + +D Sbjct: 177 AKIDTLILGCTHFPLLTPFIKSAIGENVTLIDSGQETVQVIQDCLAQSHLSTVSKHDHND 236 Query: 248 HALFLSGKPDIAMRRLMQGF 267 + +G P + Sbjct: 237 DVYYTTGDPVLFKAIATDWL 256 >gi|311113410|ref|YP_003984632.1| glutamate racemase [Rothia dentocariosa ATCC 17931] gi|310944904|gb|ADP41198.1| glutamate racemase [Rothia dentocariosa ATCC 17931] Length = 346 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 12/268 (4%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I +FDSG+GGL V + + +P IYV D PYG + ++ + Sbjct: 23 PAGPTSSAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 82 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGL 122 + +++D + VIACNTA + + R + + + + PA ++A A T++ Sbjct: 83 IMDELVDSG-VKMLVIACNTASAAVLRDARERYTRHYGIPVIEVIQPAARRALAATRNRK 141 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +++T AT+ + + + V+ VE+ E+ + E Sbjct: 142 IGVIATEATVTSRAYEDTF-AIAPNLMVQSVACPRFVEFVEKGVTSGP----ELLRTAEE 196 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + R D +VL CTHYPL+ + + V + ++D A+ L N Sbjct: 197 YLQPLKDSRVDTLVLGCTHYPLLTGIISYIMGEGVTLVSSADETAKDVYRALLTENIENP 256 Query: 243 --RVFDDHALFLSGKPDIAMRRLMQGFG 268 H +G+ + + G Sbjct: 257 DLETNPHHEFLATGESETFENLARRFLG 284 >gi|169628573|ref|YP_001702222.1| glutamate racemase [Mycobacterium abscessus ATCC 19977] gi|169240540|emb|CAM61568.1| Probable glutamate racemase MurI [Mycobacterium abscessus] Length = 282 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 13/263 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ Sbjct: 3 DAPIGIFDSGVGGLTVARAIIDQLPDEDILYVGDTGNGPYGPLTIPEIRTHALTIGDDLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + L VIACNTA + R + + + V PA+++A T + I ++ T AT Sbjct: 63 GRGVKAL-VIACNTASAACLRDARERYAPVPVIEVVLPAVRRAVHTTHNNKIGVIGTEAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + I V+ VE + ++ + EG + + Sbjct: 122 IASGAYQDAFAA-ARDTEITAVACPRFVDFVERGITSGR----QVLQLAEGYLEPLQRAQ 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR------VF 245 D +VL CTHYPL+ + + V + +++ A+ +L + + Sbjct: 177 VDTVVLGCTHYPLLSGLIQLAMGEDVTLVSSAEETAKDLLRVLSEKDLLRPHPERPGTAS 236 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 + +G P+ + G Sbjct: 237 PNRVFEATGDPEAFRALAARFLG 259 >gi|226311374|ref|YP_002771268.1| glutamate racemase [Brevibacillus brevis NBRC 100599] gi|226094322|dbj|BAH42764.1| probable glutamate racemase [Brevibacillus brevis NBRC 100599] Length = 270 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 7/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I + DSG+GGL V +++ +PE +YV D+ PYG+ ++ + D + Sbjct: 4 ERAIAVIDSGVGGLTVAKEVMRQLPEERIVYVGDNARCPYGSKSPEEIRTYSFQMI-DYV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + VIACNTA ++ +E P + +G + P + A T++G I ++ T T Sbjct: 63 MRTPLKALVIACNTATAVVLEEAIGDLP-LPVIGVIEPGARAAVQVTKNGRIGVIGTETT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + ++ ++ VE + +E ++ ++ + Sbjct: 122 IRTKAYERALLRIQPDLYVAGMACPAFVPLVESHMANT----EEARRVVKETLAPFLHED 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ + ++ V +++++ AR + + +H Sbjct: 178 LDTLILGCTHYPLLAPIISEVMGDRVRLINSAEETARELSLQIATDAERKQIERPEHLFV 237 Query: 252 LSGKPDIAMRRLMQGF 267 SG + + Sbjct: 238 TSGDANKFRTIAEEWL 253 >gi|78357785|ref|YP_389234.1| glutamate racemase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220190|gb|ABB39539.1| glutamate racemase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 285 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 8/267 (2%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M+I++ C+ + I +FDSG+GGL VL+ +R MP +Y+ D PYG + Sbjct: 1 MQIESG-CDSRRDLPIGMFDSGVGGLTVLKALRRRMPCESILYLGDTARLPYGTKSAETV 59 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + + ++++ L V+ACNT + LR+ +P + +G V P + + + Sbjct: 60 TRYALQASARLVER-DIKLLVVACNTVSATALEPLRNAYPGIPVIGVVQPGAQASCRASA 118 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 +G I++++T +T+R IH+ + EE + E + Sbjct: 119 TGRIAVIATESTIRGRAYERAIHAIRPDAQTTGAPCPLFVPLAEEGWLDGPLVEGIAARY 178 Query: 180 IEGCFIEKEGKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 + F G D +VL CTH+PL+ R + V +D++ A+ L Sbjct: 179 LNPIFHPASGSGRPETPDCLVLGCTHFPLLAGAIRNVIGDGVTIVDSAAITAKAVEAELR 238 Query: 236 RINTHQTRVF-DDHALFLSGKPDIAMR 261 + + + R Sbjct: 239 ARGLERRATECGETRFMATDDVPRFSR 265 >gi|289422435|ref|ZP_06424278.1| glutamate racemase [Peptostreptococcus anaerobius 653-L] gi|289157007|gb|EFD05629.1| glutamate racemase [Peptostreptococcus anaerobius 653-L] Length = 268 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 106/265 (40%), Gaps = 16/265 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSG+GGL VL+++ + +Y D PYG + K Sbjct: 1 MDNRP--------IGVFDSGLGGLTVLREIHKRLANEDTVYFGDTARVPYGPRSKETIIK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSG 121 + ++ + VIACNTA +E ++ + ++ +G + A + A YT + Sbjct: 53 YTFQAINFLI-QQDVKAIVIACNTATARALEEAKAEY-NVPIIGVIEAGARSAVEYTNNK 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++ ++ T T+ N I S + + + VEE +I ++ Sbjct: 111 VVGVIGTLGTINSKAYVNTIRSMDESIRVIDKACPLFVPLVEEGWANEEISSTAAHMYLD 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 E K D IVL CTHYP++ + ++ + A + +L + N Sbjct: 171 ----ELVEKGVDSIVLGCTHYPILKRTIGMAVGQEIKLINPAKETALELKEILNQANLLN 226 Query: 242 TRVFDD-HALFLSGKPDIAMRRLMQ 265 + + ++S + + + Sbjct: 227 DKADEGVCKYYVSDINEQFSKVASE 251 >gi|241663373|ref|YP_002981733.1| glutamate racemase [Ralstonia pickettii 12D] gi|240865400|gb|ACS63061.1| glutamate racemase [Ralstonia pickettii 12D] Length = 280 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 6/248 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + Q + +FDSG+GGL VL+ + +P +Y+AD PYG + +R + + Sbjct: 1 MTTRAQAPVGVFDSGLGGLSVLRAISAELPAESLLYLADSRHAPYGEKSPEFIAERTLRV 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+ Sbjct: 61 CEWLVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T +TLR + L+ + C + L +E + + ++ Sbjct: 119 TESTLRSEKFARLLAAASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLQAYLQPM 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D +VL CTHYP + R+++ + +D ++AR L + Sbjct: 175 LDAHADTLVLGCTHYPFLEDAIREIAGDRLTLIDTGHAVARHLGRTLSAAGLRSSDQAAS 234 Query: 248 HALFLSGK 255 +G Sbjct: 235 PRFMSTGD 242 >gi|313201826|ref|YP_004040484.1| glutamate racemase [Methylovorus sp. MP688] gi|312441142|gb|ADQ85248.1| glutamate racemase [Methylovorus sp. MP688] Length = 297 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 6/234 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + +FDSG+GGL VL +R +P+ IY AD + PYG+ + R + L ++ Sbjct: 35 DSPVGVFDSGVGGLSVLAHIRQALPQESLIYAADSMHAPYGSKSQAFIIDRAIQLSDFLI 94 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA ELRS + ++ +G PA+K AAA T+SG+I +L+T TL Sbjct: 95 SRGAKAL-VVACNTATAAAISELRSRY-AIPIIGMEPAVKPAAAATRSGVIGVLATSGTL 152 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ SY Q + + + L +E +++ + ++ +E Sbjct: 153 QSAQFAALLESYGRQVRVETQACVGLVECIERG----ELQTADTRQLLEKYIQPLLEAGA 208 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D +VL CTHYP + + +L+ V +D ++AR+ + L + + + Sbjct: 209 DTLVLGCTHYPFVRPLIEELAGPEVAIIDTGAAVARQLKHRLQEADLLKDDSYK 262 >gi|186893477|ref|YP_001870589.1| glutamate racemase [Yersinia pseudotuberculosis PB1/+] gi|229486285|sp|B2JZF9|MURI_YERPB RecName: Full=Glutamate racemase gi|186696503|gb|ACC87132.1| glutamate racemase [Yersinia pseudotuberculosis PB1/+] Length = 287 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 138/264 (52%), Gaps = 4/264 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ + Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+ Sbjct: 80 VTAVQQSHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ +YT +LI + + C I L+ S L E G + + +KK + + Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEAAETKLHGGVVPLEVLKKILHPWLSMR 198 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++ Sbjct: 199 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 256 Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270 A ++ D A+ ++Q +G Sbjct: 257 IAYCMALDEDTDALLPVLQSYGFP 280 >gi|297583708|ref|YP_003699488.1| glutamate racemase [Bacillus selenitireducens MLS10] gi|297142165|gb|ADH98922.1| glutamate racemase [Bacillus selenitireducens MLS10] Length = 280 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q I + DSG+GGL V+ ++ +P+ IY+ D PYG + + + + Sbjct: 1 MQRPIGVIDSGVGGLTVVSELMRQLPKEEIIYIGDTKRCPYGPRPAFEVAEYTWEMIDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + + L VIACNTA ++ D+ R + +G + P A T++ + ++ T Sbjct: 61 MSR-DIKLLVIACNTASAVVLDDARQAL-DIPVIGVIHPGAVAALKATENLEVGVIGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + S + + ++ L VE + +E K I Sbjct: 119 TISSGAYYEELKSIHNDVKVVSLACPTLVPLVESN----RYTGEEAKAVIREALEPMLDY 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 D ++L CTHYP+I + + + + + D AR LL T H Sbjct: 175 PVDSLILGCTHYPMIEREIQDVVGEDIHVICSGDETARAVSTLLYHEQLLYTGERRPRHL 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 + +G + Sbjct: 235 FYTTGAKAMFQSIAESWL 252 >gi|18311550|ref|NP_563484.1| glutamate racemase [Clostridium perfringens str. 13] gi|20177975|sp|Q8XHB7|MURI_CLOPE RecName: Full=Glutamate racemase gi|18146234|dbj|BAB82274.1| probable glutamate racemase [Clostridium perfringens str. 13] Length = 260 Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 6/242 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GGL VL+K +MP ++IY D PYG ++ ++ Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + NL+ Y + + L +E ++ +++K + + Sbjct: 126 TQEKFKNLMDKYGEHREVIPLPCPGLVEFIEAG----DLEGEDVKNFLREKLNPYMDREI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251 IVL CTHYP + V + L VD +D S R + L N +++ + +F Sbjct: 182 SSIVLGCTHYPFVKDVIQDLVGEKVDIIDGSSGTIRELKRRLEENNMESESKKKGNLDIF 241 Query: 252 LS 253 S Sbjct: 242 NS 243 >gi|294670141|ref|ZP_06735066.1| glutamate racemase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308068|gb|EFE49311.1| glutamate racemase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 270 Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 9/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL ++ + +P + +Y D PYG ++ + +L Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPLENIVYFGDTARVPYGVKSRATIETFTAQIVGFML 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A QAA A T++ I +++T T Sbjct: 66 E-HDVKALVIACNTIAAVAGHKVRQMAGNMPVLDVISAGAQAALATTRNNHIGVIATNTT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + + + VEE ++ ++ ++ E Sbjct: 125 VNSNAYAREIHRRNPAARVQSQACPLFVPLVEEGWLDHEVTRLTAREYLKPLLAE----D 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHA 249 D +VL CTHYPL+ + +Q +P + +D++ + A L T D+ Sbjct: 181 VDTLVLGCTHYPLLKPLLQQEAP-QLQLVDSALTTAEAVAQALQAEGLLNDGTGQTADYR 239 Query: 250 LFLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 240 FYVSDIPLRFQTIGERFLG 258 >gi|29653649|ref|NP_819341.1| glutamate racemase [Coxiella burnetii RSA 493] gi|161830181|ref|YP_001596247.1| glutamate racemase [Coxiella burnetii RSA 331] gi|29540911|gb|AAO89855.1| glutamate racemase [Coxiella burnetii RSA 493] gi|161762048|gb|ABX77690.1| glutamate racemase [Coxiella burnetii RSA 331] Length = 280 Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 4/256 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S IL Sbjct: 5 RPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS-ILI 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 L V+ACNTA T +L+ F + +G V P + A T++ +++L+T T+ Sbjct: 64 AQNIKLLVVACNTASTAALPQLQQQFSHIPIIGVVEPGARAAVVATKNNKVALLATETTI 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + + Q I + + + EE +I KK +E + Sbjct: 124 QSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPIINGY--HQC 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTH+P+++ + ++ ++++ + A + +L + N + + Sbjct: 182 DSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTLSFLV 241 Query: 253 SGKPDIAMRRLMQGFG 268 + P+ R FG Sbjct: 242 TDSPERFTRIGEIFFG 257 >gi|53804366|ref|YP_113738.1| glutamate racemase [Methylococcus capsulatus str. Bath] gi|81682254|sp|Q609F9|MURI_METCA RecName: Full=Glutamate racemase gi|53758127|gb|AAU92418.1| glutamate racemase [Methylococcus capsulatus str. Bath] Length = 271 Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 120/253 (47%), Gaps = 7/253 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I +FDSG+GGL VL+++R ++P + +YVAD PYGN +++R + + +L Sbjct: 5 EHPIGVFDSGVGGLSVLREIRAVLPHENLLYVADSGHLPYGNKPAEYIEQRALTVGRFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNTA +R+ F + +G P +K A A ++S ++ +L+T TL Sbjct: 65 SRGA-KAIVVACNTATAAAITVMRAEFR-VPVIGMEPGLKPAVALSKSLVVGVLATEGTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +L+ + + + +VE G D +++ E + Sbjct: 123 KSAKFRDLVGRTTEKVEVIAQACPGWVEQVERGDLGSPATRDLVRRYTEPAL----ERGA 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP + + ++ V ++ ++AR R L R+ LF Sbjct: 179 DTLVLGCTHYPFLAGLIADVAGPDVHIVETGSAVARHLRRRLEADGLLTRRMAPGVELFW 238 Query: 253 SGKP-DIAMRRLM 264 S P ++A R L Sbjct: 239 SSGPAEVAGRSLA 251 >gi|294142952|ref|YP_003558930.1| glutamate racemase [Shewanella violacea DSS12] gi|293329421|dbj|BAJ04152.1| glutamate racemase [Shewanella violacea DSS12] Length = 291 Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 23/277 (8%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L IL+FDSGIGGL +L ++R +P ++IY+ D+ PYG + L + L +D Sbjct: 14 LSKPILVFDSGIGGLTILDEIRLALPNENYIYLFDNARLPYGELGEQELISGSVSLITDF 73 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + +IACNTA TLI LR+ ++ +G VPAIK AA ++ I +L+TP T Sbjct: 74 VKNESVSMVIIACNTASTLILPSLRAAL-NIPVVGVVPAIKPAALLSKKKHIGLLATPGT 132 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++RTYT LI + +C + L +S L E+ A G + + ++ + + + + Sbjct: 133 IKRTYTHELIEQFAGECKVDLYASSELVLLAEQKAAGHPVTQQQLARILSPIYQSEL--- 189 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-------LPRINTHQTRV 244 D +VL CTH+P++ ++ + LD+ ++A R L L + + Sbjct: 190 -DTLVLGCTHFPILRQEMQEYLGDKISLLDSGKAVAARVVTLKLKAQQKLVQAEWDKDET 248 Query: 245 FD-----------DHALFLSGKPDIAMRRLMQGFGLK 270 + + A F S + +++ + FG Sbjct: 249 NEGLEQEGDCSRTELAYFTSQSIEKGLKKTLAKFGFS 285 >gi|150261128|ref|ZP_01917856.1| putative glutamate racemase [Yersinia pestis CA88-4125] gi|153947950|ref|YP_001399143.1| glutamate racemase [Yersinia pseudotuberculosis IP 31758] gi|161484906|ref|NP_667666.2| glutamate racemase [Yersinia pestis KIM 10] gi|161511329|ref|NP_994432.2| glutamate racemase [Yersinia pestis biovar Microtus str. 91001] gi|162100189|ref|YP_650027.2| glutamate racemase [Yersinia pestis Antiqua] gi|162139457|ref|YP_645991.2| glutamate racemase [Yersinia pestis Nepal516] gi|162202299|ref|YP_001164844.2| glutamate racemase [Yersinia pestis Pestoides F] gi|218930909|ref|YP_002348784.1| glutamate racemase [Yersinia pestis CO92] gi|229839605|ref|ZP_04459764.1| glutamate racemase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841690|ref|ZP_04461846.1| glutamate racemase [Yersinia pestis biovar Orientalis str. India 195] gi|229896694|ref|ZP_04511859.1| glutamate racemase [Yersinia pestis Pestoides A] gi|229904756|ref|ZP_04519867.1| glutamate racemase [Yersinia pestis Nepal516] gi|20177979|sp|Q8ZAA2|MURI_YERPE RecName: Full=Glutamate racemase gi|167017322|sp|A7FD15|MURI_YERP3 RecName: Full=Glutamate racemase gi|115349520|emb|CAL22494.1| putative glutamate racemase [Yersinia pestis CO92] gi|149290536|gb|EDM40613.1| putative glutamate racemase [Yersinia pestis CA88-4125] gi|152959445|gb|ABS46906.1| glutamate racemase [Yersinia pseudotuberculosis IP 31758] gi|229678874|gb|EEO74979.1| glutamate racemase [Yersinia pestis Nepal516] gi|229691029|gb|EEO83082.1| glutamate racemase [Yersinia pestis biovar Orientalis str. India 195] gi|229695971|gb|EEO86018.1| glutamate racemase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700301|gb|EEO88335.1| glutamate racemase [Yersinia pestis Pestoides A] gi|320013493|gb|ADV97064.1| glutamate racemase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 287 Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 4/264 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+ Sbjct: 80 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ +YT +LI + + C I L+ S L E G + + +KK + + Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 198 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++ Sbjct: 199 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 256 Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270 A ++ D A+ ++Q +G Sbjct: 257 IAYCMALDEDTDALLPVLQSYGFP 280 >gi|167760730|ref|ZP_02432857.1| hypothetical protein CLOSCI_03115 [Clostridium scindens ATCC 35704] gi|167661617|gb|EDS05747.1| hypothetical protein CLOSCI_03115 [Clostridium scindens ATCC 35704] Length = 281 Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 8/250 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL V +++ +P + +Y D PYG+ + + + L+ Sbjct: 17 APVGVFDSGVGGLTVAREIMRQLPMENVVYFGDTARVPYGSKSRDNIIRFSRQII-RFLE 75 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 VIACNTA L D ++ + +G + P + A T++G I ++ T AT+ Sbjct: 76 TKNVKAIVIACNTASALALDTVQKE-TDVPVIGVIGPGARAAVKETRNGQIGVVGTEATI 134 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + +IHS + + + VEE KI E+ I+ + + + Sbjct: 135 QSETYTKVIHSLNPEASVIGKPCPLFVPLVEEGFAKHKITEEA----IDFYLSDMKSTQI 190 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251 D ++L CTHYPL+ + ++ + A + L +Q+ + + + Sbjct: 191 DTMILGCTHYPLLRSKIMAYFGEEIHIVNPAYETAMDLKAALNDCGIANQSGIPATYEFY 250 Query: 252 LSGKPDIAMR 261 +S + Sbjct: 251 VSDAAQKFTK 260 >gi|297250774|ref|ZP_06865032.2| glutamate racemase [Neisseria polysaccharea ATCC 43768] gi|296837995|gb|EFH21933.1| glutamate racemase [Neisseria polysaccharea ATCC 43768] Length = 327 Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 123 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 124 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 183 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 238 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 239 IDTLVLGCTHFPLLKPLISREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 298 YVSDIPLKFRTIGERFLG 315 >gi|150026137|ref|YP_001296963.1| glutamate racemase [Flavobacterium psychrophilum JIP02/86] gi|149772678|emb|CAL44161.1| Glutamate racemase [Flavobacterium psychrophilum JIP02/86] Length = 259 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 8/252 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I +FDSGIGG + +++ L+P + IY+AD PYG + + ++ Sbjct: 4 NNPIGLFDSGIGGTSIWKEIHQLLPNENTIYLADSKNAPYGKKSKQEIIELCFKNIDYLV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNTA T ++R + + +G PAIK AA TQ+ I IL+T T+ Sbjct: 64 SQ-NCKMIVVACNTATTNAIIQIREKYK-IPIIGIEPAIKPAANKTQTQTIGILATKGTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + SY + I L +E +I+ E+ K + Sbjct: 122 NSELFNKQVESY-TNIKIIEQIGYGLVELIENG----EIESPEMTKLLTSYLEPMIKANI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-LF 251 D +VL C+HYP +V +++ P + +D+ ++AR+ + +L + N T + + Sbjct: 177 DYLVLGCSHYPYLVPAIKKIIPENIKIIDSGQAVARQTKTILEKNNLLNTTTKNSQQIFY 236 Query: 252 LSGKPDIAMRRL 263 + P + L Sbjct: 237 ANSNPTVLKNIL 248 >gi|85860927|ref|YP_463129.1| glutamate racemase [Syntrophus aciditrophicus SB] gi|123517831|sp|Q2LXZ9|MURI_SYNAS RecName: Full=Glutamate racemase gi|85724018|gb|ABC78961.1| glutamate racemase [Syntrophus aciditrophicus SB] Length = 270 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 113/256 (44%), Gaps = 8/256 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG+GGL V++ + +P + +Y D PYG + + +L + Sbjct: 10 PIGVFDSGVGGLTVVRALMERLPFENILYFGDTARVPYGVKSVETINAYARQITEFLL-R 68 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133 + L +IACNT + + + + + L + A ++A A T++ + ++ TP T+ Sbjct: 69 QEVKLLIIACNTMAAVARQSV-ESLSPVPVLDVIDAGARRAVAETRTHSVGVIGTPTTIN 127 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + I + I + +L VEE + ++ + E D Sbjct: 128 SNAYARAICRLAPETRIFSQACALLVPLVEEGWLDHPVTRLTAQEYLRPVLAE----HID 183 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALFL 252 +VL CTHYPL+ + + ++ + +D+++++A LL + T+ R+ ++ ++ Sbjct: 184 TLVLGCTHYPLLKALLQDVAGPDIHLVDSAEAMADATAELLQVQHLTNPERIPPEYRFYV 243 Query: 253 SGKPDIAMRRLMQGFG 268 + P + + G Sbjct: 244 TDVPLRFQQIGERFLG 259 >gi|307246771|ref|ZP_07528839.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255755|ref|ZP_07537558.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260207|ref|ZP_07541916.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852346|gb|EFM84583.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861315|gb|EFM93306.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865752|gb|EFM97631.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 267 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 78/261 (29%), Positives = 134/261 (51%), Gaps = 6/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAIKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y + LI Y C + + + L VEE + +D + K + + Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEW---QTHPT 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPKVKFFIDPGNGIANRVATLLSEFSLENSAQNKENIAF 236 Query: 252 LSGKPDIAMRR--LMQGFGLK 270 + + +R +MQ +G K Sbjct: 237 CTKMDEEFSKREIIMQQWGFK 257 >gi|315633799|ref|ZP_07889089.1| glutamate racemase [Aggregatibacter segnis ATCC 33393] gi|315477841|gb|EFU68583.1| glutamate racemase [Aggregatibacter segnis ATCC 33393] Length = 278 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 134/261 (51%), Gaps = 9/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +IL FDSG+GGL V Q+++ L+P+YH++Y D+ FPY + + +R + + I Sbjct: 6 KPTILFFDSGVGGLSVYQEVKQLLPDYHYLYCFDNAYFPYSEKPEEGIVERTLKICQRIE 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 L VIACNTA T++ LR F S+ +G VPAIK AA T++ I +L+T T+ Sbjct: 66 KLCPLDLIVIACNTASTVVLPVLRKHF-SIPIVGTVPAIKPAAEQTKTKHIGLLATKGTV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R Y S+LI Y S C + + S L E G I +EIK E+ + Sbjct: 125 KRQYLSDLIDKYASFCQVEKIGSTKLVELAEHKLHGYPIDLNEIKAELSEW---ENIPDL 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTH+PL+ +Q P ++D+ +IA+R + LL + + Sbjct: 182 DAVVLGCTHFPLLKSEIQQCLPQVKYFIDSGAAIAKRVKSLLKDVKVRSKNQMNSQVFCT 241 Query: 253 SGKP---DIAMRRLMQGFGLK 270 KP + ++ L+ G + Sbjct: 242 --KPLVKEDSLLELIHSLGFE 260 >gi|296268925|ref|YP_003651557.1| glutamate racemase [Thermobispora bispora DSM 43833] gi|296091712|gb|ADG87664.1| glutamate racemase [Thermobispora bispora DSM 43833] Length = 277 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 6/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +I IFDSG+GGL V + + +P YVAD PYG +++ + + ++ Sbjct: 3 SGAIGIFDSGVGGLTVARAIIDQLPNESIFYVADTARQPYGPKPIAKVREYALEVMDHLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + ++ + VIACN+A + + R + PA+++A T++ + ++ T AT+ Sbjct: 63 E-HEVKMLVIACNSASAAVLRDARERYSVPVVEVIQPAVRRAVRVTKNRKVGVIGTRATI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + V++ +L VE K E+ + I G Sbjct: 122 ESMAYHDAFAA-APDIELVAVAAPLLVEFVERGETMSK----ELIEVIRGYLKPILDAGC 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + +++ A+ +L H Sbjct: 177 DTLILGCTHYPLLTGAISYVAGDGVTLVSSAEETAKDVYRILHDRGMFNAEAEPFHRFRA 236 Query: 253 SGKPDIAMRRLMQGFG 268 +G + R + G Sbjct: 237 TGDTALFARLGRRFLG 252 >gi|190151197|ref|YP_001969722.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252719|ref|ZP_07338881.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248913|ref|ZP_07530924.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307264546|ref|ZP_07546130.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|229486230|sp|B3GZ94|MURI_ACTP7 RecName: Full=Glutamate racemase gi|189916328|gb|ACE62580.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648458|gb|EFL78652.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854608|gb|EFM86800.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306870145|gb|EFN01905.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 267 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 78/261 (29%), Positives = 134/261 (51%), Gaps = 6/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y + LI Y C + + + L VEE + +D + K + + Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEW---QTHPT 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPKVKFFIDPGNGIANRVATLLSEFSLENSAQNKENIAF 236 Query: 252 LSGKPDIAMRR--LMQGFGLK 270 + + +R +MQ +G K Sbjct: 237 CTKMDEEFSKREIIMQQWGFK 257 >gi|255321272|ref|ZP_05362438.1| glutamate racemase [Acinetobacter radioresistens SK82] gi|255301826|gb|EET81077.1| glutamate racemase [Acinetobacter radioresistens SK82] Length = 276 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 11/261 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSGIGGL V Q++ +P +Y AD PYG D +++ + L Sbjct: 7 DAPIGIFDSGIGGLSVAQEIARHLPHEQILYYADTAHVPYGPRSDQNIRELTAQAI-EWL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + +V+ACNTA D LR + S +G VPA+K A +++ ++++L+TPAT Sbjct: 66 YRQGCKAAVVACNTASAFSLDYLRKHYGESFPIIGLVPALKPAVLQSKTKVVAVLATPAT 125 Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 R ++I + + + ++ + L VE+ + + +KK ++ Sbjct: 126 FRGNLIKDVIERFAMPTGVKVLPITCLELVPLVEQGLQMSQQCLNTLKKILQ----PVVE 181 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248 + D +VL CTHYP + + + + +D+ ++AR+ +L + + + Sbjct: 182 QGADHLVLGCTHYPFLKPAIQAIFGQQLTLVDSGQAVARQTARILIKNELLGEQTCESET 241 Query: 249 --ALFLSGKPDIAMRRLMQGF 267 ++SG ++ ++Q Sbjct: 242 RIQCYVSGHNAENLKPILQHL 262 >gi|307257940|ref|ZP_07539694.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863587|gb|EFM95516.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 267 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 6/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y + LI Y C + + + L VEE + +D + K + + Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEW---QTHPT 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+PL+ +QL P ++D IA R LL + + ++ F Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPKVKFFIDPGSGIANRVATLLSEFSLENSAQNKENIAF 236 Query: 252 LSGKPDIAMRR--LMQGFGLK 270 + + +R +MQ +G K Sbjct: 237 CTKMDEEFSKREIIMQQWGFK 257 >gi|90961813|ref|YP_535729.1| glutamate racemase [Lactobacillus salivarius UCC118] gi|90821007|gb|ABD99646.1| Glutamate racemase [Lactobacillus salivarius UCC118] Length = 256 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 7/260 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K Sbjct: 1 MTNKKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEK 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++ Sbjct: 61 VEHLLS-YNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMA 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP TL+ ++L++ YV++ I + + L +E + E++ + Sbjct: 120 TPLTLKEKKFNDLMNKYVTEADIRKIPAPDLVEFIESG----DVDSPELETYLRNLLSPY 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + D IVL CTH+P V +++ +D + AR + LL + N + Sbjct: 176 KDS--DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKG 233 Query: 248 HALFLSGKPDIAMRRLMQGF 267 F + + L Q Sbjct: 234 SVKFENSRNTKEELELSQKL 253 >gi|269213840|ref|ZP_05982968.2| glutamate racemase [Neisseria cinerea ATCC 14685] gi|269145167|gb|EEZ71585.1| glutamate racemase [Neisseria cinerea ATCC 14685] Length = 293 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 12/269 (4%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 K++N Q I +FDSGIGGL ++ + +P + IY D PYG ++ Sbjct: 23 KMEN----IGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIE 78 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQS 120 M + +L+ + VIACNT + ++R +M L + A K A A T++ Sbjct: 79 HFSMQIVDFLLE-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRN 137 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I I++T T+ + IH + ++ +L VEE ++ + + + Sbjct: 138 NKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYL 197 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + D +VL CTH+PL+ + + + V +D++ + A +L + Sbjct: 198 KPLLAD----GIDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLL 252 Query: 241 QT-RVFDDHALFLSGKPDIAMRRLMQGFG 268 T D+ ++S P + G Sbjct: 253 NTDNNNPDYRFYVSDIPLKFRTIGERFLG 281 >gi|51594484|ref|YP_068675.1| glutamate racemase [Yersinia pseudotuberculosis IP 32953] gi|81640781|sp|Q66G56|MURI_YERPS RecName: Full=Glutamate racemase gi|51587766|emb|CAH19366.1| putative glutamate racemase [Yersinia pseudotuberculosis IP 32953] Length = 287 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 138/264 (52%), Gaps = 4/264 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ + Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+ Sbjct: 80 VTAVQQSHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ +YT +LI + + C I L+ S L E G + + +KK + + Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 198 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++ Sbjct: 199 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 256 Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270 A ++ D A+ ++Q +G Sbjct: 257 IAYCMALDEDTDALLPVLQSYGFP 280 >gi|301301177|ref|ZP_07207333.1| glutamate racemase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851176|gb|EFK78904.1| glutamate racemase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 256 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 7/260 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K Sbjct: 1 MTNKKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEK 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++ Sbjct: 61 VEHLLS-YNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMA 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP TL+ ++L++ YV++ I + + L +E + E++ + Sbjct: 120 TPLTLKEKKFNDLMNKYVTEADIRKIPAPDLVEFIESG----DVDSPELETYLRKLLNPY 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + D IVL CTH+P V +++ +D + AR + LL + N + Sbjct: 176 KDS--DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKG 233 Query: 248 HALFLSGKPDIAMRRLMQGF 267 F + K L Q Sbjct: 234 SVKFENSKNTKEELELSQKL 253 >gi|237728080|ref|ZP_04558561.1| glutamate racemase [Citrobacter sp. 30_2] gi|226910337|gb|EEH96255.1| glutamate racemase [Citrobacter sp. 30_2] Length = 283 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 147/272 (54%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSEEFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T AT++R+YT LI + ++C I ++ S L E G + +E+++ + Sbjct: 128 GVVGLLATRATVKRSYTHELIARFANECQIAMLGSAELVELAEAKLHGETVSLEELRRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWL--RMSEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 ++ A ++ + + ++Q +G K+ Sbjct: 246 AKSTDENVAFCMAMTTEAEQLLPVLQRYGFKT 277 >gi|317495245|ref|ZP_07953615.1| glutamate racemase [Gemella moribillum M424] gi|316914667|gb|EFV36143.1| glutamate racemase [Gemella moribillum M424] Length = 264 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 107/258 (41%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++N+I +FDSG+GGL V +++ +P Y D PYG+ + K + Sbjct: 1 MKNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTKDEIIKNTEKAVEFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +++ + V+ACNTA + L+ + ++ +G V P ++A T++ + +L T Sbjct: 61 INQG-VKMIVLACNTATAAALEYLQDRY-NLPIIGVVQPGARRAIQATENNNVLVLGTQF 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T I + S ++ + +E + E +K ++ + + Sbjct: 119 TADSKVYDKEIKNINSDIVVYDKACPTFCPFIE---AEGNLVEGATQKLLKDVLFDTKLL 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249 D +VL CTHYP++ + + + + AR +L Q ++ +H Sbjct: 176 DIDTVVLGCTHYPILKKDIEEYYGNNIKVISSGHEAARDVSTVLGYAKLLQKKLNKTEHK 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 F+S + + + Sbjct: 236 FFISKESEHFNNIASKWL 253 >gi|283458299|ref|YP_003362918.1| glutamate racemase [Rothia mucilaginosa DY-18] gi|283134333|dbj|BAI65098.1| glutamate racemase [Rothia mucilaginosa DY-18] Length = 350 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 12/269 (4%) Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P I +FDSG+GGL V + + +P IYV D PYG + ++ + Sbjct: 21 APVGPTAAAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANAL 80 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSG 121 + +++D + VIACNTA + + R + + + + PA ++A A T++ Sbjct: 81 RIMDELVDSG-VKMLVIACNTASAAVLRDARERYTRQYGIPVIEVIQPAARRALAATRNR 139 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T AT+ + + +H V+ VE+ E+ + Sbjct: 140 KIGVIATEATVTSRAYEDTF-AITPNLEVHSVACPRFVEFVEKGITSGP----ELLETAR 194 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ V + V + ++D A+ L Sbjct: 195 EYLQPLKDAGVDTLVLGCTHYPLLAGVISYIMGEDVTLVSSADETAKDVYRELLNHAIES 254 Query: 242 --TRVFDDHALFLSGKPDIAMRRLMQGFG 268 H +G+ + + + G Sbjct: 255 PVPEENPHHEFLATGETETFSQLARRFLG 283 >gi|1709184|sp|P52972|MURI_BACSH RecName: Full=Glutamate racemase gi|849141|gb|AAA68029.1| glutamate racemase [Lysinibacillus sphaericus] Length = 265 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG ++ + Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIIKRLPNETIYYIGDTARCPYGPRTRQEVRNFTWQ-MAKA 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPA 130 L+K + VIACNTA + + L+ P LG + + A T+ + +L+T Sbjct: 60 LEKMNIKMLVIACNTATAVALESLQRNMP-FPVLGVINRGARAAVKKTKRHEVVVLATEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S + HI ++ VE + + I + + Sbjct: 119 TIKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKGQFANN----LIAEGLKPLKNE 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA 249 + D ++L CTHYP++ + V L +++ A+ +L T T H Sbjct: 175 QFDTVILGCTHYPILQKQIEAVVGEDVFVLSSAEETAKDVEEMLAYNGTLADTNAKPAHK 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 + +G I Sbjct: 235 FYATGSVPIFRSIAENWL 252 >gi|183597279|ref|ZP_02958772.1| hypothetical protein PROSTU_00524 [Providencia stuartii ATCC 25827] gi|188023294|gb|EDU61334.1| hypothetical protein PROSTU_00524 [Providencia stuartii ATCC 25827] Length = 288 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 135/261 (51%), Gaps = 5/261 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL+FDSG+GGL V ++++ L+P H+IY D+ FPYG + + R+ L I Sbjct: 24 IRPTILVFDSGVGGLSVYREVKKLLPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQLVDVI 83 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 K+ +++IACNTA T+ LR+ F +G VPAIK A T++G++ +L+T T Sbjct: 84 AKKHPLTIAIIACNTASTVSLPNLRAHFR-FPVVGVVPAIKPATKLTRNGVVGLLATKGT 142 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI + + C + + S L E G +I DEI ++ E Sbjct: 143 VNREYTKELIERFATDCKVLSLGSADLVQLAERKLHGEQIPLDEIANAVKPWLRMPEP-- 200 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFDDHA 249 D ++L CTH+PL++ Q+ P ++D+ +IARRA L+ ++ D Sbjct: 201 PDTVILGCTHFPLLIEELEQVLPDGTRFIDSGAAIARRAVWLINNQAEEVIDSQEKDFAY 260 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 L +A++ ++ G Sbjct: 261 CLLMNDAALALQPVLAAEGFN 281 >gi|227890834|ref|ZP_04008639.1| glutamate racemase [Lactobacillus salivarius ATCC 11741] gi|227867243|gb|EEJ74664.1| glutamate racemase [Lactobacillus salivarius ATCC 11741] Length = 256 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 7/260 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K Sbjct: 1 MTNKKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEK 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++ Sbjct: 61 VEHLLS-YNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMA 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP TL+ ++L++ YV++ I + + L +E + E++ ++ Sbjct: 120 TPLTLKEKKFNDLMNKYVTKADIRKIPAPDLVEFIESG----DVDSPELETYLQKLLSPY 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + D IVL CTH+P V +++ +D + AR + LL + N + Sbjct: 176 KDS--DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKG 233 Query: 248 HALFLSGKPDIAMRRLMQGF 267 F + + L Q Sbjct: 234 SVKFENSRNTKGELELSQKL 253 >gi|262380044|ref|ZP_06073199.1| glutamate racemase [Acinetobacter radioresistens SH164] gi|262298238|gb|EEY86152.1| glutamate racemase [Acinetobacter radioresistens SH164] Length = 289 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 11/261 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSGIGGL V Q++ +P +Y AD PYG D +++ + L Sbjct: 20 DAPIGIFDSGIGGLSVAQEIARHLPHEQILYYADTAHVPYGPRSDQNIRELTAQAI-EWL 78 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + +V+ACNTA D LR + S +G VPA+K A +++ ++++L+TPAT Sbjct: 79 YRQGCKAAVVACNTASAFSLDYLRKHYGESFPIIGLVPALKPAVLQSKTKVVAVLATPAT 138 Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 R ++I + + + ++ + L VE+ + + +KK ++ Sbjct: 139 FRGNLIKDVIERFAMPTGVKVLPITCLELVPLVEQGLQMSQQCLNTLKKILQ----PVVE 194 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248 + D +VL CTHYP + + + + +D+ ++AR+ +L + + + Sbjct: 195 QGADHLVLGCTHYPFLKPAIQAIFGQQLTLVDSGQAVARQTARILIKNELLGEQTCESET 254 Query: 249 --ALFLSGKPDIAMRRLMQGF 267 ++SG ++ ++Q Sbjct: 255 RIQCYVSGHNAENLKPILQHL 275 >gi|329770518|ref|ZP_08261896.1| glutamate racemase [Gemella sanguinis M325] gi|328836267|gb|EGF85936.1| glutamate racemase [Gemella sanguinis M325] Length = 264 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 9/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + N+I +FDSG+GGL V +++ +P Y D PYG+ + + + Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKKKDEIIINTEKAIKYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +++ + ++ACNTA + L+ + + +G V P ++A T++ + +L T Sbjct: 61 INQG-VKMIILACNTATAAALEYLQEKY-DLPIIGVVQPGARRAIQATENNKVLVLGTKF 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKEIEGCFIEKEG 189 T I + S ++ + +E E + +D IK+ + Sbjct: 119 TTTSEVYDIEIQNINSDIVVYDKACPSFVPFIESEGYLNKEEADDIIKETLNDT----ID 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DH 248 D +VL CTHYP++ + + + + AR +L HQ++V +H Sbjct: 175 LGMDTVVLGCTHYPMLKKNIEEFYGNQIKVISSGREAAREVSTVLGYSKLHQSKVNKTEH 234 Query: 249 ALFLSGKPDIAMRRLMQGF 267 F+S K + + Sbjct: 235 KFFISAKSENFDNIASKWL 253 >gi|262037470|ref|ZP_06010930.1| glutamate racemase [Leptotrichia goodfellowii F0264] gi|261748505|gb|EEY35884.1| glutamate racemase [Leptotrichia goodfellowii F0264] Length = 261 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 11/251 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI IFDSG+GGL VL+++R ++P Y+ D PYG + + + +L++ Sbjct: 2 SIGIFDSGVGGLTVLKEIRKVLPNEKIYYLGDTARVPYGEKTKELIVRYSKQITEFLLEQ 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133 V+ACNTA +L +EL+ TF + +G V A +K A T++ I ++ T AT+ Sbjct: 62 -NVDAIVVACNTATSLALEELKETFR-VPIIGVVDAGVKTALYTTKNNKIGVIGTKATIN 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + S ++ S + +EE +I + +K ++ ++ D Sbjct: 120 SRKYETEIKNKNSAIEVYSKSCPLFVPVIEEGITKGEIVDLVVKMYLDEF-----KEKID 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHALF 251 ++L CTHYPL+ + L P ++ +D + A + +L N + + + Sbjct: 175 SLILGCTHYPLLKETIKNLYP-NIEIVDPAKETAEDLKKILTDNNLMKNDGEKGKEVRYY 233 Query: 252 LSGKPDIAMRR 262 ++ + Sbjct: 234 VTDGQEKFKEI 244 >gi|172041148|ref|YP_001800862.1| glutamate racemase [Corynebacterium urealyticum DSM 7109] gi|171852452|emb|CAQ05428.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 288 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 105/259 (40%), Gaps = 9/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + L+P IY+ D PYG+ +++ + +++ Sbjct: 22 NAPIGIFDSGVGGLTVARTIVDLLPHESIIYIGDTANSPYGDKTIAQVREYARMVADELV 81 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNTA + R +P +PA+++A + +++ I ++ T AT+ Sbjct: 82 ARG-VKMIVIACNTASAAFMRDARERYPIPVVEVILPAVRRAVSASRNNRIGLIGTQATV 140 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +L + + VE + +I EG + Sbjct: 141 TSGAYQDLFAA-SPDVTAVAQACPQFVPFVERGITSGR----QIHALAEGYLEPLKEAGV 195 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--- 249 D +VL CTHYPL+ V + + V +++++ A+ L + A Sbjct: 196 DTVVLGCTHYPLLTGVVQFVMGEDVTLVNSAEETAKMVYRTLAESGQLADNDPERQATLS 255 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G P + + G Sbjct: 256 FESTGDPHRFAQLAQRFLG 274 >gi|163840216|ref|YP_001624621.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209] gi|162953692|gb|ABY23207.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209] Length = 306 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 12/271 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++ +P + Q + IFDSG+GGL V + + +P YV D PYG ++ Sbjct: 1 MNQHPVVQ-AQAPLGIFDSGVGGLTVARSVIDQLPNESIFYVGDTANAPYGPLPIAEVRA 59 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYT 118 + + +++D L VIACN+A + + R + + + + PA+++A A T Sbjct: 60 NALGVMDELVDSG-VKLLVIACNSATAAVLPDARERYTLRHGIPVVEVIRPAVRRAVAAT 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++G I ++ T AT+ + + S + + VE E+ Sbjct: 119 RNGRIGVIGTEATIGSRAYEDSF-AVASDLQVTSAACPKFVEFVELGITAGP----ELLN 173 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 E + D +VL CTHYPL+ V + V + +++ A+ L + Sbjct: 174 TAEEYLAPLKAAGVDTLVLGCTHYPLLTGVISYVMGDGVTLVSSAEETAKDVYKALIEHD 233 Query: 239 THQTR-VFDDHALFLSGKPDIAMRRLMQGFG 268 +T + H +G + + G Sbjct: 234 LERTENLPPQHRFISTGDAEGFGTLARRFLG 264 >gi|300214554|gb|ADJ78970.1| Glutamate racemase [Lactobacillus salivarius CECT 5713] Length = 256 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 7/260 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K Sbjct: 1 MTNKKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEK 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++ Sbjct: 61 VEHLLS-YNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMA 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP TL+ ++L++ YV++ I + + L +E + E++ ++ Sbjct: 120 TPLTLKEKKFNDLMNKYVTKADIRKIPAPDLVEFIESG----DVDSPELETYLQKLLSPY 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + D IVL CTH+P V +++ +D + AR + LL + N + Sbjct: 176 KDS--DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKG 233 Query: 248 HALFLSGKPDIAMRRLMQGF 267 F + + L Q Sbjct: 234 SVKFENSRNTKEELELSQKL 253 >gi|220913060|ref|YP_002488369.1| glutamate racemase [Arthrobacter chlorophenolicus A6] gi|219859938|gb|ACL40280.1| glutamate racemase [Arthrobacter chlorophenolicus A6] Length = 360 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 106/267 (39%), Gaps = 11/267 (4%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I +FDSG+GGL V + + +P +YV D PYG ++ + Sbjct: 36 PAAALETRPIGVFDSGVGGLTVARSIIDQLPNESILYVGDTAHGPYGPLPIAEVRANALG 95 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGL 122 + +++D L IACN+A + + R + + + + PA+++A A T+SG Sbjct: 96 VMDELVDSG-VKLLTIACNSASAAVLRDARERYTAKYGIPVIEVIQPAVRRAVAATRSGR 154 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + ++ T AT+ + + HI V+ S VE E+ E Sbjct: 155 VGVIGTSATVGSRAYEDTFAA-APDLHITSVACPEFVSYVEAGIT----TGPELLAVAEE 209 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYPL+ V + V + +++ A+ L N +T Sbjct: 210 YLAPLKASGVDTVVLGCTHYPLLTGVISYVMGADVTLVSSAEETAKDVYRALATNNLQRT 269 Query: 243 -RVFDDHALFLSGKPDIAMRRLMQGFG 268 +H +G + G Sbjct: 270 AATPPEHHFVATGDAAQFETLARRFLG 296 >gi|160873307|ref|YP_001552623.1| glutamate racemase [Shewanella baltica OS195] gi|189030369|sp|A9KW83|MURI_SHEB9 RecName: Full=Glutamate racemase gi|160858829|gb|ABX47363.1| glutamate racemase [Shewanella baltica OS195] gi|315265534|gb|ADT92387.1| glutamate racemase [Shewanella baltica OS678] Length = 274 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 11/256 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+ Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + CH+ L L E+ ++ + + Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N + Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRR------ 229 Query: 252 LSGKPDIAMRRLMQGF 267 ++ + + + +MQ F Sbjct: 230 VTNEREALGQSVMQAF 245 >gi|15608478|ref|NP_215854.1| glutamate racemase [Mycobacterium tuberculosis H37Rv] gi|15840793|ref|NP_335830.1| glutamate racemase [Mycobacterium tuberculosis CDC1551] gi|31792534|ref|NP_855027.1| glutamate racemase [Mycobacterium bovis AF2122/97] gi|148661127|ref|YP_001282650.1| glutamate racemase [Mycobacterium tuberculosis H37Ra] gi|148822559|ref|YP_001287313.1| glutamate racemase [Mycobacterium tuberculosis F11] gi|167969085|ref|ZP_02551362.1| glutamate racemase [Mycobacterium tuberculosis H37Ra] gi|215403185|ref|ZP_03415366.1| glutamate racemase [Mycobacterium tuberculosis 02_1987] gi|215410983|ref|ZP_03419791.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A] gi|215426667|ref|ZP_03424586.1| glutamate racemase [Mycobacterium tuberculosis T92] gi|215430224|ref|ZP_03428143.1| glutamate racemase [Mycobacterium tuberculosis EAS054] gi|215445520|ref|ZP_03432272.1| glutamate racemase [Mycobacterium tuberculosis T85] gi|218753049|ref|ZP_03531845.1| glutamate racemase [Mycobacterium tuberculosis GM 1503] gi|219557241|ref|ZP_03536317.1| glutamate racemase [Mycobacterium tuberculosis T17] gi|253799614|ref|YP_003032615.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 1435] gi|254364235|ref|ZP_04980281.1| glutamate racemase murI [Mycobacterium tuberculosis str. Haarlem] gi|254550350|ref|ZP_05140797.1| glutamate racemase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186277|ref|ZP_05763751.1| glutamate racemase [Mycobacterium tuberculosis CPHL_A] gi|260200395|ref|ZP_05767886.1| glutamate racemase [Mycobacterium tuberculosis T46] gi|260204599|ref|ZP_05772090.1| glutamate racemase [Mycobacterium tuberculosis K85] gi|289442780|ref|ZP_06432524.1| glutamate racemase [Mycobacterium tuberculosis T46] gi|289446933|ref|ZP_06436677.1| glutamate racemase MurI [Mycobacterium tuberculosis CPHL_A] gi|289554870|ref|ZP_06444080.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 605] gi|289569351|ref|ZP_06449578.1| glutamate racemase MurI [Mycobacterium tuberculosis T17] gi|289574004|ref|ZP_06454231.1| glutamate racemase MurI [Mycobacterium tuberculosis K85] gi|289745090|ref|ZP_06504468.1| glutamate racemase MurI [Mycobacterium tuberculosis 02_1987] gi|289749894|ref|ZP_06509272.1| glutamate racemase MurI [Mycobacterium tuberculosis T92] gi|289753420|ref|ZP_06512798.1| glutamate racemase MurI [Mycobacterium tuberculosis EAS054] gi|289757443|ref|ZP_06516821.1| glutamate racemase [Mycobacterium tuberculosis T85] gi|289761499|ref|ZP_06520877.1| glutamate racemase MurI [Mycobacterium tuberculosis GM 1503] gi|294994896|ref|ZP_06800587.1| glutamate racemase [Mycobacterium tuberculosis 210] gi|297633891|ref|ZP_06951671.1| glutamate racemase [Mycobacterium tuberculosis KZN 4207] gi|297730879|ref|ZP_06959997.1| glutamate racemase [Mycobacterium tuberculosis KZN R506] gi|298524845|ref|ZP_07012254.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A] gi|306775517|ref|ZP_07413854.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu001] gi|306780667|ref|ZP_07419004.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu002] gi|306784068|ref|ZP_07422390.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu003] gi|306788429|ref|ZP_07426751.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu004] gi|306792758|ref|ZP_07431060.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu005] gi|306797162|ref|ZP_07435464.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu006] gi|306803041|ref|ZP_07439709.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu008] gi|306807235|ref|ZP_07443903.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu007] gi|306967432|ref|ZP_07480093.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu009] gi|306971625|ref|ZP_07484286.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu010] gi|307079337|ref|ZP_07488507.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu011] gi|307083902|ref|ZP_07493015.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu012] gi|313658212|ref|ZP_07815092.1| glutamate racemase [Mycobacterium tuberculosis KZN V2475] gi|54037866|sp|P63636|MURI_MYCBO RecName: Full=Glutamate racemase gi|54041259|sp|P63635|MURI_MYCTU RecName: Full=Glutamate racemase gi|166231043|sp|A5U238|MURI_MYCTA RecName: Full=Glutamate racemase gi|1340104|emb|CAA98102.1| PROBABLE GLUTAMATE RACEMASE MURI [Mycobacterium tuberculosis H37Rv] gi|13880988|gb|AAK45644.1| glutamate racemase [Mycobacterium tuberculosis CDC1551] gi|31618123|emb|CAD94234.1| PROBABLE GLUTAMATE RACEMASE MURI [Mycobacterium bovis AF2122/97] gi|134149749|gb|EBA41794.1| glutamate racemase murI [Mycobacterium tuberculosis str. Haarlem] gi|148505279|gb|ABQ73088.1| glutamate racemase [Mycobacterium tuberculosis H37Ra] gi|148721086|gb|ABR05711.1| glutamate racemase murI [Mycobacterium tuberculosis F11] gi|253321117|gb|ACT25720.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 1435] gi|289415699|gb|EFD12939.1| glutamate racemase [Mycobacterium tuberculosis T46] gi|289419891|gb|EFD17092.1| glutamate racemase MurI [Mycobacterium tuberculosis CPHL_A] gi|289439502|gb|EFD21995.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 605] gi|289538435|gb|EFD43013.1| glutamate racemase MurI [Mycobacterium tuberculosis K85] gi|289543105|gb|EFD46753.1| glutamate racemase MurI [Mycobacterium tuberculosis T17] gi|289685618|gb|EFD53106.1| glutamate racemase MurI [Mycobacterium tuberculosis 02_1987] gi|289690481|gb|EFD57910.1| glutamate racemase MurI [Mycobacterium tuberculosis T92] gi|289694007|gb|EFD61436.1| glutamate racemase MurI [Mycobacterium tuberculosis EAS054] gi|289709005|gb|EFD73021.1| glutamate racemase MurI [Mycobacterium tuberculosis GM 1503] gi|289713007|gb|EFD77019.1| glutamate racemase [Mycobacterium tuberculosis T85] gi|298494639|gb|EFI29933.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A] gi|308215989|gb|EFO75388.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu001] gi|308326496|gb|EFP15347.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu002] gi|308331137|gb|EFP19988.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu003] gi|308334978|gb|EFP23829.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu004] gi|308338784|gb|EFP27635.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu005] gi|308342425|gb|EFP31276.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu006] gi|308346336|gb|EFP35187.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu007] gi|308350259|gb|EFP39110.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu008] gi|308354908|gb|EFP43759.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu009] gi|308358852|gb|EFP47703.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu010] gi|308362789|gb|EFP51640.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu011] gi|308366436|gb|EFP55287.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu012] gi|323720155|gb|EGB29258.1| glutamate racemase murI [Mycobacterium tuberculosis CDC1551A] gi|326902961|gb|EGE49894.1| glutamate racemase murI [Mycobacterium tuberculosis W-148] gi|328459360|gb|AEB04783.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 4207] Length = 271 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ Sbjct: 6 APVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVG 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACN+A + + R + +PA+++A A T++G I ++ T AT+ Sbjct: 66 RGVKAL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATIT 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + I V+ VE + ++ +G + D Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAQGYLEPLQRAEVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251 +VL CTHYPL+ + + V + +++ A+ +L I+ + Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFE 239 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P+ + + G Sbjct: 240 ATGDPEAFTKLAARFLG 256 >gi|213609517|ref|ZP_03369343.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 233 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 127/235 (54%), Gaps = 3/235 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S L E G + +E+++ + E D +V Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 L CTH+PL+ Q+ P +D+ +IARR LL + A Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYC 233 >gi|94987309|ref|YP_595242.1| glutamate racemase [Lawsonia intracellularis PHE/MN1-00] gi|94731558|emb|CAJ54921.1| Glutamate racemase [Lawsonia intracellularis PHE/MN1-00] Length = 286 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 5/256 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + I +FDSG+GGL VLQ ++ LMP +++Y+ D PYG + + S Sbjct: 2 NKSSPIGLFDSGVGGLTVLQALQNLMPNENYLYLGDTARLPYGTKSPKTVLHYAIQSAST 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 ++++ Q L +IACNTA L+ TFP + +G + P+ + A + G +++++T Sbjct: 62 LIER-QIKLLIIACNTATAAALPLLQETFPFIPIIGVIEPSAQIACKTSLKGHVAVIATE 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 +T++ I Y + + + + VEE I E I + F + Sbjct: 121 STIQGKCYEETILRYRPEILVESKACPLFVPIVEEGWFSGPIVESIIIHYLSSLFFNRSI 180 Query: 190 KR-TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFD 246 K D +VL CTHYPL+ +++ + +D++ + A+ + + + N T + Sbjct: 181 KDQPDCLVLGCTHYPLLSETIQKIIGNDITIVDSTVATAKLVQACIIQHNMVNPNTNLIG 240 Query: 247 DHALFLSGKPDIAMRR 262 + R Sbjct: 241 STIFLTTDDKVRFARI 256 >gi|227833923|ref|YP_002835630.1| Glutamate racemase [Corynebacterium aurimucosum ATCC 700975] gi|262184926|ref|ZP_06044347.1| glutamate racemase [Corynebacterium aurimucosum ATCC 700975] gi|227454939|gb|ACP33692.1| Glutamate racemase [Corynebacterium aurimucosum ATCC 700975] Length = 258 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 7/261 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + +P+ IY+ D PYG +++ + Sbjct: 1 MPDATSPIGIFDSGVGGLTVARTIIEQLPDESIIYIGDTAHAPYGPRPIAQVRELSTAIA 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +++++ + VIACNTA + R + PA+++A A T++G I ++ T Sbjct: 61 DELVERG-CKMLVIACNTATAAFLHDARERYDIPVVEVIRPAVRRAIATTRNGKIGVIGT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ +L + V+ + VE + +I EG + Sbjct: 120 EGTINSGAYQDLF-AVNPNVECEAVACPDFVNFVERGITAGR----QILGVAEGYLAPLQ 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDD 247 D +VL CTHYPL+ V + V + +++ + +L + Sbjct: 175 SAGVDTLVLGCTHYPLLTGVIQLAIGDNVTLVSSAEETTKDVLRILTNTDLLAPAGQAPT 234 Query: 248 HALFLSGKPDIAMRRLMQGFG 268 + +G R + G Sbjct: 235 RSFECTGDHAAFERLATRFLG 255 >gi|269103679|ref|ZP_06156376.1| glutamate racemase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163577|gb|EEZ42073.1| glutamate racemase [Photobacterium damselae subsp. damselae CIP 102761] Length = 273 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 129/240 (53%), Gaps = 7/240 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 IFDSG+GGL V Q++R +P+ +IY D+ FPYG L +R + ++++ ++Q Sbjct: 14 IFDSGVGGLSVYQEIRARLPQAQYIYAFDNAAFPYGELPQQVLIERACHIITNLVARHQA 73 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L V+ACNTA T++ LR ++ +G VPAIK AA + S I +L+TPAT+ R YT Sbjct: 74 DLVVVACNTASTIVLPALRQQL-TIPVVGVVPAIKPAAQASLSKSIGLLATPATVERPYT 132 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +L+ + C + ++ + L EE G + +E+ + + + D IVL Sbjct: 133 HDLVKQFAQDCQVLMLGTTRLVEMAEEKLQGEVVSLNELTQILAPWL-----GKVDTIVL 187 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKP 256 CTH+PL+ +Q+ V +D+ +IA R LLP T + + D+ + S KP Sbjct: 188 GCTHFPLMRAEIQQVCGAGVTIIDSGKAIANRVVSLLPESATQDAALEEMDNLTYCSAKP 247 >gi|120405243|ref|YP_955072.1| glutamate racemase [Mycobacterium vanbaalenii PYR-1] gi|119958061|gb|ABM15066.1| glutamate racemase [Mycobacterium vanbaalenii PYR-1] Length = 281 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 12/260 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL V + + +P+ IY+ D PYG ++ + + D+ + Sbjct: 11 PIGIFDSGVGGLTVARAVIDQLPDEDIIYIGDTGNGPYGPLTIPEIRAHALAIGDDLAGR 70 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 VIACN+A + + R + + + + PA+++A A T++G I ++ T AT+ Sbjct: 71 G-IKALVIACNSASSACLRDARERYAPIPVVEVILPAVRRAVATTRNGRIGVIGTAATIA 129 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + V+ VE + ++ EG + D Sbjct: 130 SGAYQDTFAA-ARDIEVFGVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAEVD 184 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-----H 248 +VL CTHYP++ + + + V + +++ A+ +L + + D Sbjct: 185 TLVLGCTHYPMLSGLIQLVMGDHVTLVSSAEETAKDLLRVLTKRELLKPHPGDPAVRAHR 244 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +G P+ + G Sbjct: 245 QFEATGDPEAFTALAARFLG 264 >gi|212712479|ref|ZP_03320607.1| hypothetical protein PROVALCAL_03574 [Providencia alcalifaciens DSM 30120] gi|212684695|gb|EEB44223.1| hypothetical protein PROVALCAL_03574 [Providencia alcalifaciens DSM 30120] Length = 258 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 82/255 (32%), Positives = 134/255 (52%), Gaps = 4/255 (1%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V ++++ L+P H+IY D+ FPYG + + R+ + + I K+ Sbjct: 1 MFDSGVGGLSVYREVKKLIPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQIVNAIAKKHPL 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 ++VIACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+ R YT Sbjct: 61 TIAVIACNTASTVSLPNLRAHF-TFPIVGVVPAIKPATKLTRNGVVGLLATKGTVNREYT 119 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 LI + + C + + S L E G + DEI + ++ KE D ++L Sbjct: 120 KELIERFATDCKVISLGSAELVQLAERKLHGEMLPLDEIAQAVKPWLKMKEA--PDTVIL 177 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTH+PLIV ++ P ++D+ +IARR L+ +D A L Sbjct: 178 GCTHFPLIVEELEKVLPNGTRFIDSGAAIARRTVWLINNQAEVTDSNEEDFAYCLLMNES 237 Query: 258 IA-MRRLMQGFGLKS 271 + +R +++ G KS Sbjct: 238 LQELRPVLEAEGFKS 252 >gi|209524014|ref|ZP_03272566.1| glutamate racemase [Arthrospira maxima CS-328] gi|209495686|gb|EDZ95989.1| glutamate racemase [Arthrospira maxima CS-328] Length = 284 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL VL+++ +P +Y AD PYG + + + + + + Sbjct: 8 QKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITWAVA 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + ++ACNT+ L + +RS F + LG + +AA +Q I +++TPAT Sbjct: 68 Q-DVKMVLMACNTSSALALEVVRSEF-DIPILGLILPGSRAA-ISQGERIGVIATPATAA 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + V +E+ +I + + +R D Sbjct: 125 SNAYRQAIQEINPAVQVWQVGCPAFVPLIEQN----RIHDPCTLEVAREYLAPLIQQRID 180 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++ CTHYP + V R L P V +D + + L + + + +S Sbjct: 181 TLIYGCTHYPHLAPVLRSLLPASVKLVDPAVHLVEAVVQELELLGLRHSDLPRPTRFCVS 240 Query: 254 GKPDIAMRRLMQGFGL 269 G + +Q G Sbjct: 241 GCAEQFANLSVQWLGY 256 >gi|304413419|ref|ZP_07394892.1| glutamate racemase [Candidatus Regiella insecticola LSR1] gi|304284262|gb|EFL92655.1| glutamate racemase [Candidatus Regiella insecticola LSR1] Length = 292 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 138/272 (50%), Gaps = 4/272 (1%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 ++ N +++ + ++LIFDSG+GGL + Q++R L+P H+IY D+ FPYG + + Sbjct: 17 LQARNAKVDQRFRPTVLIFDSGVGGLSIYQEIRQLLPNIHYIYAFDNQAFPYGEKTEAFI 76 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++ L VIACNTA T+ LR F +G VPAIK A T++ Sbjct: 77 VERVLKIVTRVQQQHPLTLVVIACNTASTVSLPTLRKYF-FFPIVGVVPAIKPAVQLTRN 135 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L+T AT+ TY +LI + + C I + S L + E+ G + + ++K + Sbjct: 136 KRIGLLATRATIHCTYIQDLIECFAADCQIERLWSSELVTLAEKKLHGGSVSVEALRKIL 195 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 D +VL CTH+PL+ ++ P+ +D+ +IA R LL Sbjct: 196 TPWL--NMDSPPDTVVLGCTHFPLLAEELAKILPYNTQMVDSGAAIAHRVVWLLSLQQKA 253 Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + A + A + ++Q +G + Sbjct: 254 VSTTARNIAYCTQKNANTALLLPVLQQYGFST 285 >gi|255326294|ref|ZP_05367380.1| glutamate racemase [Rothia mucilaginosa ATCC 25296] gi|255296748|gb|EET76079.1| glutamate racemase [Rothia mucilaginosa ATCC 25296] Length = 350 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 12/269 (4%) Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P I +FDSG+GGL V + + +P IYV D PYG + ++ + Sbjct: 21 APVGPTAAAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANAL 80 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSG 121 + +++D + VIACNTA + + R + + + + PA ++A A T++ Sbjct: 81 RIMDELVDSG-VKMLVIACNTASAAVLRDARERYTRQYGIPVIEVIQPAARRALAATRNR 139 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T AT+ + + +H V+ VE+ E+ + Sbjct: 140 KIGVIATEATVTSRAYEDTF-AITPNLEVHSVACPRFVEFVEKGITSGP----ELLETAR 194 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ V + V + ++D A+ L Sbjct: 195 EYLQPLKDAGVDTLVLGCTHYPLLAGVISYIMGEDVTLVSSADETAKDVYRELLNHAIES 254 Query: 242 --TRVFDDHALFLSGKPDIAMRRLMQGFG 268 H +G+ + + + G Sbjct: 255 PVPAENPHHEFLATGESETFSQLARRFLG 283 >gi|30019021|ref|NP_830652.1| glutamate racemase [Bacillus cereus ATCC 14579] gi|229126278|ref|ZP_04255296.1| Glutamate racemase [Bacillus cereus BDRD-Cer4] gi|29894563|gb|AAP07853.1| Glutamate racemase [Bacillus cereus ATCC 14579] gi|228657270|gb|EEL13090.1| Glutamate racemase [Bacillus cereus BDRD-Cer4] Length = 276 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA EL+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IKSNMYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVLSFEHIAERWLGYQ 259 >gi|91774979|ref|YP_544735.1| glutamate racemase [Methylobacillus flagellatus KT] gi|91708966|gb|ABE48894.1| glutamate racemase [Methylobacillus flagellatus KT] Length = 270 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 7/253 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I +FDSG+GGL VL+ ++ +P H +YVAD + PYG + +R + + Sbjct: 9 MTPAIGVFDSGVGGLSVLRHIQQQLPHEHLLYVADSLNAPYGPKPQAFIIERSRNIAQFL 68 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA LR+ + +G PA+K AAA T+SG++ +L+T T Sbjct: 69 IESGA-KAIVVACNTATAAAIRILRNEL-DIPVIGMEPAVKPAAAATRSGVVGVLATTGT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L+ + L+ Y + + + L +E ++ + + G + Sbjct: 127 LKSAQFAALLEHYGKHIKVVAQACVGLVECIERG----ELDTPSTRALVAGYVAPLMEEG 182 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250 D IVL CTHYP I + ++ V +D ++AR+ L +R Sbjct: 183 ADTIVLGCTHYPFIKPLIADIAGPDVVLIDTGAAVARQVGHRLEEAGLLTASRAPGSVKA 242 Query: 251 FLSGKPDIAMRRL 263 + + A + + Sbjct: 243 WTNSAAGNAQQLI 255 >gi|255692422|ref|ZP_05416097.1| glutamate racemase [Bacteroides finegoldii DSM 17565] gi|260621890|gb|EEX44761.1| glutamate racemase [Bacteroides finegoldii DSM 17565] Length = 280 Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + S + D Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVSKLFD 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L + P+ LG + P ++ TQ+ I IL+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPNIDPARRVLGVIRPTVECIGNITQNQHIGILA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + V+ + S VE + + I+K I+ Sbjct: 129 TAGTVKSESYPLEIHKLFPDIRVSGVACPMWVSLVENNESQNEGTDYFIRKYIDQLLT-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D ++L CTH+P+++ RQ P + + + +A+ + L R + Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPEHISVISQGEYVAQSLKDYLRRHPEMDAKCTKN 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + + Sbjct: 247 GNCSFYTTEAEEKFTE 262 >gi|113968524|ref|YP_732317.1| glutamate racemase [Shewanella sp. MR-4] gi|122944227|sp|Q0HNV7|MURI_SHESM RecName: Full=Glutamate racemase gi|113883208|gb|ABI37260.1| glutamate racemase [Shewanella sp. MR-4] Length = 272 Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 11/266 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R L+P + + Y+ D+ PYG E+ L + L + Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHDYCYLFDNARLPYGELEEQELVSGCVALIDQV 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + CH+ L S L E+ ++ + Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQKIATGQLD----MARLTQVLSPIVTAD 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ------TRVF 245 DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q R Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGKGVTLLDSGEAIAKRVKTLLAETKSEQQVQEDANRDS 235 Query: 246 DDHALFLSGKPDIAMRRLMQGFGLKS 271 A + K + ++ G + Sbjct: 236 VMQAFYTKAKISEGLVSMLVDCGFST 261 >gi|297625966|ref|YP_003687729.1| glutamate racemase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921731|emb|CBL56289.1| Glutamate racemase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 272 Score = 287 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 99/253 (39%), Gaps = 8/253 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + I IFDSG GGL V + + L+P IY+ D PYG +++ ++ Sbjct: 1 MNRDVNAPIGIFDSGFGGLTVARAVVDLLPREDIIYLGDTARAPYGPRPIAEVREFVLQA 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++ + L VIACNT + + R + +PA ++AA T++G + ++ Sbjct: 61 LDSLVARGVKSL-VIACNTGSSAALHDARERYDLPITEVVLPAARKAARITRNGRVGVIC 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T ++ + S + VE E+ + Sbjct: 120 TRGTAISRSYNDALA--ASPVKLFTQVCPRFVEFVEAGIT----TGPEVLQLAREYLAPL 173 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246 + D ++L CTHYPL+ V + V + +SD AR L R + +T Sbjct: 174 QADDIDTLILGCTHYPLLSGVISYVMGEDVTLVSSSDECARAVFAELTRDDLLRTEPHEP 233 Query: 247 DHALFLSGKPDIA 259 F +G P Sbjct: 234 QREFFTTGDPAQF 246 >gi|327439324|dbj|BAK15689.1| glutamate racemase [Solibacillus silvestris StLB046] Length = 266 Score = 287 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V + + L+P Y+ D PYG ++ + Sbjct: 1 MNAPIGVIDSGVGGLTVAKAIMELLPNETIYYIGDTARCPYGPRTKQEVRNFTWE-MAKA 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130 L+K + VIACNTA + + L+ P LG + A + A T+ + +L+T Sbjct: 60 LEKMNVKMLVIACNTATAVALESLQKHMP-FPVLGVINAGARAAIKKTKRNEVVVLATEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + S ++ I ++ VE + D + K ++ E + Sbjct: 119 TIKSGAYEEAVKSLSTKAKIIPLACPTFVPLVESGEYEGQFSYDLVAKGLK----PLEDE 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 R D ++L CTHYP++ V L +++ A+ +L +T H Sbjct: 175 RFDTVILGCTHYPILQKQIEAAVGSQVHVLSSAEETAKDVEAILSYTGQLRTDEEPPKHI 234 Query: 250 LFLSGKPDIAMRRLMQGF 267 L SG I + Sbjct: 235 LHASGSVPIFRSIAERWL 252 >gi|282901288|ref|ZP_06309214.1| Glutamate racemase [Cylindrospermopsis raciborskii CS-505] gi|281193783|gb|EFA68754.1| Glutamate racemase [Cylindrospermopsis raciborskii CS-505] Length = 285 Score = 287 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 9/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I +FDSG+GGL VL+++ +P IY D PYG + + + + + + Sbjct: 23 SPIGVFDSGVGGLTVLRQVYQQLPNESVIYFGDTAHLPYGIRSQKEILGYVREILNWM-E 81 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + + ++ACNT+ L + +R + LG + PA K A I +++TPAT Sbjct: 82 QQGVKMVIMACNTSSALTLETVRLEYK-FPILGMISPATKFAVNV--GKRIGVIATPATA 138 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I + VS +E+ ++ + + + Sbjct: 139 KSNAYRQAIMELKVNVQVWQVSCPEFVPLIEQN----RLHDPYTLAVAKSYLEPLLAQEI 194 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++ CTHYPL+ + + L P + +D + + R + L +N + + Sbjct: 195 DTLIYGCTHYPLLEPIIKTLIPNHIHLVDPAVHVVRVCQRELEILNIKNRLLPMPTRFVV 254 Query: 253 SGKPDIAMRRLMQGFGL 269 SG P + G Sbjct: 255 SGSPQQFSQSGTPWLGY 271 >gi|269214987|ref|ZP_05987513.2| glutamate racemase [Neisseria lactamica ATCC 23970] gi|269208607|gb|EEZ75062.1| glutamate racemase [Neisseria lactamica ATCC 23970] Length = 326 Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 122 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 123 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 182 VNSNAYARAIHRSNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 237 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 238 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 296 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 297 YVSDIPLKFRTIGERFLG 314 >gi|108800810|ref|YP_641007.1| glutamate racemase [Mycobacterium sp. MCS] gi|119869950|ref|YP_939902.1| glutamate racemase [Mycobacterium sp. KMS] gi|108771229|gb|ABG09951.1| Glutamate racemase [Mycobacterium sp. MCS] gi|119696039|gb|ABL93112.1| glutamate racemase [Mycobacterium sp. KMS] Length = 280 Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 13/261 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++++ Sbjct: 11 PVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDDLVER 70 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA + + R + + + + PA+++A A T++G I ++ T AT+ Sbjct: 71 GVKAL-VIACNTASSACLRDARERYAPVPVVEVILPAVRRAVATTRNGRIGVIGTAATIA 129 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + V+ VE + ++ EG + D Sbjct: 130 SGAYQDAFAA-ARDIEVIGVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRADVD 184 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---- 249 +VL CTHYP++ + + V + +++ A+ +L ++ + D A Sbjct: 185 TLVLGCTHYPMLSGLIQLAMGDQVTLVSSAEETAKDLLRVLTELDLLRPHPADPGATPAT 244 Query: 250 --LFLSGKPDIAMRRLMQGFG 268 +G P+ + G Sbjct: 245 RVFESTGDPEAFATLATRFLG 265 >gi|224025256|ref|ZP_03643622.1| hypothetical protein BACCOPRO_01993 [Bacteroides coprophilus DSM 18228] gi|224018492|gb|EEF76490.1| hypothetical protein BACCOPRO_01993 [Bacteroides coprophilus DSM 18228] Length = 280 Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 10/262 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +FDSG GGL +L K+R LMP +IY+ D+ PYG + + + + Sbjct: 9 SGPVGVFDSGYGGLTILAKIRELMPHNDYIYLGDNARTPYGTRSFEVVYEFTLQAVRKLF 68 Query: 73 DKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 + P L ++ACNTA ++ P+ LG + P ++ A T + + +L Sbjct: 69 ELGCP-LVILACNTASAKALRSIQQNDLPYLDPTRRVLGVIRPTVESIGALTATRHVGVL 127 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +TP T+ IH + + + VE + + ++K I+G Sbjct: 128 ATPGTILSESYPLEIHKLFPDVQVTGMPCPMWVPLVENNEFASEGADYFVRKYIDGLLS- 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VF 245 + D ++L CTHYPL++ R+ +P + + + +AR + L R +R Sbjct: 187 -QDPEIDTLILGCTHYPLLLDKIRRFTPSHIRLVAQGEYVARSLKDYLSRHTEMNSRCTC 245 Query: 246 DDHALFLSGKPDIAMRRLMQGF 267 + H FL+ + R F Sbjct: 246 NGHCEFLTTESVSKFRESASVF 267 >gi|15676369|ref|NP_273505.1| glutamate racemase [Neisseria meningitidis MC58] gi|218768777|ref|YP_002343289.1| glutamate racemase [Neisseria meningitidis Z2491] gi|60392794|sp|P0A0Q9|MURI_NEIMA RecName: Full=Glutamate racemase gi|60392795|sp|P0A0R0|MURI_NEIMB RecName: Full=Glutamate racemase gi|6274531|gb|AAF06679.1|AF163663_4 putative glutamate racemase MurI [Neisseria meningitidis] gi|7225684|gb|AAF40895.1| glutamate racemase [Neisseria meningitidis MC58] gi|121052785|emb|CAM09131.1| glutamate racemase [Neisseria meningitidis Z2491] gi|254672785|emb|CBA06865.1| Glutamate racemase [Neisseria meningitidis alpha275] gi|316985801|gb|EFV64744.1| glutamate racemase [Neisseria meningitidis H44/76] gi|319411017|emb|CBY91415.1| glutamate racemase [Neisseria meningitidis WUE 2594] gi|325136845|gb|EGC59443.1| glutamate racemase [Neisseria meningitidis M0579] gi|325140970|gb|EGC63477.1| glutamate racemase [Neisseria meningitidis CU385] gi|325199643|gb|ADY95098.1| glutamate racemase [Neisseria meningitidis H44/76] Length = 270 Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 241 YVSDIPLKFRTIGERFLG 258 >gi|253997247|ref|YP_003049311.1| glutamate racemase [Methylotenera mobilis JLW8] gi|253983926|gb|ACT48784.1| glutamate racemase [Methylotenera mobilis JLW8] Length = 270 Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 7/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GG+ VLQ + L+P +YVAD PYGN ++ R + ++ Sbjct: 12 QRPIAVFDSGVGGISVLQHIHTLLPNEQLLYVADSKYAPYGNKSPAEIQARCTEITDFLI 71 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNTA D +R + ++ +G PA+K AA +++G+I +L+T TL Sbjct: 72 ANHA-KAIVVACNTATAAAIDMMREKY-TLPIIGMEPAVKPAATASRNGIIGVLATTGTL 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ SY + + + L VE +++ D + ++ + Sbjct: 130 KSAQFAGLLESYGRNVKVVTQACVGLVECVERG----ELQADATLQLVQKYCQPLLDEGA 185 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251 D IVL CTHYP + + Q+ V +D ++A++ + L ++ + + Sbjct: 186 DTIVLGCTHYPFVRPLIEQVVGAQVSLIDTGAAVAKQLQKRLSALDLLTNNQQRGRVQFW 245 Query: 252 LSGKPDIAMRRLMQGF 267 + + A + + + Sbjct: 246 TNSAAENAKQVVENLW 261 >gi|325266613|ref|ZP_08133290.1| glutamate racemase [Kingella denitrificans ATCC 33394] gi|324982056|gb|EGC17691.1| glutamate racemase [Kingella denitrificans ATCC 33394] Length = 287 Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 121/270 (44%), Gaps = 8/270 (2%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 + ID I +FDSG+GGL V++ + +P + +Y D PYG + + Sbjct: 12 LSIDIRTMNANNSKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTI 71 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQ 119 + + + +L + Q VIACNT + +++ +M L + A QAA A T+ Sbjct: 72 EDFSLQIVDFLL-QNQVKALVIACNTIAAVAGAKVQQMAGNMPVLSVIEAGAQAALATTR 130 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + I +++T T+ + IH++ I ++ +L VEE ++ +++ Sbjct: 131 NNHIGVIATNTTVNSNAYARAIHAHNPDTRILSQAAPLLVPLVEEGWLDHEVTRLTVREY 190 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 ++ +K D ++L CTHYPL+ + RQ +P ++ +D+S + A L Sbjct: 191 LKPLLADK----IDTLILGCTHYPLLKPLIRQEAP-HIELVDSSTTTAEATAQALAAAQL 245 Query: 240 HQTRV-FDDHALFLSGKPDIAMRRLMQGFG 268 T+ D+ ++S P + G Sbjct: 246 LNTQPCTPDYRFYVSDIPLRFQTIGERFLG 275 >gi|309782392|ref|ZP_07677116.1| glutamate racemase [Ralstonia sp. 5_7_47FAA] gi|308918729|gb|EFP64402.1| glutamate racemase [Ralstonia sp. 5_7_47FAA] Length = 282 Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 6/248 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + + Sbjct: 1 MTTRAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAERTLRV 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+ Sbjct: 61 CEWLVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T +TLR + L+ C + L +E + + + Sbjct: 119 TESTLRSEKFARLLAGASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLRAYLQPM 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D +VL CTHYP + +++ + +D ++AR L + Sbjct: 175 LDANADTLVLGCTHYPFLEDAIHEIAGDRLTLIDTGHAVARHLGRTLAAAGLQASGQAAT 234 Query: 248 HALFLSGK 255 +G Sbjct: 235 PCFMSTGD 242 >gi|317494788|ref|ZP_07953200.1| glutamate racemase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917390|gb|EFV38737.1| glutamate racemase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 286 Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 84/255 (32%), Positives = 138/255 (54%), Gaps = 5/255 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG ++ + +R++ +++ ++ Sbjct: 29 LVFDSGVGGLSVYQEIRSLLPDLHYIYAFDNQGFPYGEKDEAFIIERVVKTVAEVQKRHP 88 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 + +IACNTA T+ LR F S +G VPAIK AA T++G++ +L+T AT++R+Y Sbjct: 89 LSIVIIACNTASTITLPALRERF-SFPIVGVVPAIKPAAKLTRNGVVGLLATKATVQRSY 147 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T +LI + + C I ++ S L E G I +KK + E D +V Sbjct: 148 THDLIARFATDCDIKMLGSSELVVLAEAKLHGEVIDHAVLKKILRPWLSMAEP--PDTVV 205 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALFLSGK 255 L CTH+PL+ + P +D+ +IARR L+ + NT T +A + Sbjct: 206 LGCTHFPLLREELAAVLPDGTRLVDSGAAIARRVAWLIANQENTLSTEDDVAYATKTNSD 265 Query: 256 PDIAMRRLMQGFGLK 270 + A+ ++ G Sbjct: 266 TE-ALLPVLHRMGFS 279 >gi|291571969|dbj|BAI94241.1| glutamate racemase [Arthrospira platensis NIES-39] Length = 285 Score = 287 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 9/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL VL+++ +P +Y AD PYG + + + + + + Sbjct: 8 QKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITWAVA 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + + ++ACNT+ L + +RS F + LG + P + A +Q I +++TPAT Sbjct: 68 Q-DVKMVLMACNTSSALALEVVRSEF-DIPILGLILPGARAAI--SQGERIGVIATPATA 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 I + V +E+ +I + + +R Sbjct: 124 ASNAYRQAIQEINPAVQVWQVGCPAFVPLIEQN----RIHDPCTLEAAREYLTPLIQQRI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++ CTHYP + V R L P V +D + + L + + + Sbjct: 180 DTLIYGCTHYPHLAPVLRSLLPAAVKLVDPAVHLVEAVAQELELLGLRHGDLPRPTRFCV 239 Query: 253 SGKPDIAMRRLMQGFGL 269 SG + +Q G Sbjct: 240 SGCAEQFANLSVQWLGY 256 >gi|78187589|ref|YP_375632.1| glutamate racemase [Chlorobium luteolum DSM 273] gi|78167491|gb|ABB24589.1| glutamate racemase [Chlorobium luteolum DSM 273] Length = 271 Score = 287 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 7/253 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++ I IFDSG+GGL V++ +R +P +Y D PYG +++ Sbjct: 4 NPGPESPIGIFDSGVGGLTVVKAVRHALPGERILYFGDTARVPYGPKSQVTIRRYAEDDT 63 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILS 127 +L ++QP + ++ACNT L D + + LG + A A T++ I ++ Sbjct: 64 QALL-RHQPKMIIVACNTVSALALDVVEHAADPLPVLGVLEAGATLAVEVTKNRRIGVIG 122 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ + I+ Q + + + EE + ++ + + Sbjct: 123 TQATVCSNAYAYAINRLDPQIEVFSRACPLFVPLAEEGM----VNDEATRLIARQYLLPL 178 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 G+ D +VL CTHYP++ V + V +D+++++A R +L + +R Sbjct: 179 VGEGIDTLVLGCTHYPILRRVIEETVGPAVRIIDSAEAVATRTETMLMKAGMLASRTEPP 238 Query: 248 H-ALFLSGKPDIA 259 L +S P Sbjct: 239 VPHLMVSDLPQKF 251 >gi|187250694|ref|YP_001875176.1| glutamate racemase [Elusimicrobium minutum Pei191] gi|186970854|gb|ACC97839.1| Glutamate racemase [Elusimicrobium minutum Pei191] Length = 264 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 117/252 (46%), Gaps = 7/252 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL +L+ ++ +P+ +FIY D PYG+ + + + + L Sbjct: 3 NKPIGIFDSGLGGLTILRALQNDLPKENFIYFGDSARVPYGSKSKSTVLQYSLEIA-KFL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK-QAAAYTQSGLISILSTPAT 131 + V+ACNTA + L+ S+ G + A A T++ ++++ T T Sbjct: 62 ETQNIKFLVVACNTASAFALEALKKEL-SIPVFGVIEAGAYAAVTKTKNKKVAVIGTSGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + +I+++ + + +++ + +EE + K E + Sbjct: 121 VSSGSYKKVINAFDKKVKVFEIATPLFVPFIEEGWADTR----AAKLVAEEYLSAVKKSG 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 +D ++L CTHYP+I + +++ V+ +D++++I++ L + +T+ ++ Sbjct: 177 SDTLILGCTHYPIIKTLIKKIMGSKVNLIDSAETISKATAGFLKSKDMLKTKGSGSVKIY 236 Query: 252 LSGKPDIAMRRL 263 S PD+ ++ Sbjct: 237 ASDAPDLFAKKA 248 >gi|152998730|ref|YP_001364411.1| glutamate racemase [Shewanella baltica OS185] gi|166231052|sp|A6WHQ9|MURI_SHEB8 RecName: Full=Glutamate racemase gi|151363348|gb|ABS06348.1| glutamate racemase [Shewanella baltica OS185] Length = 274 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 11/256 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+ Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + CH+ L L E+ ++ + + Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N + Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRR------ 229 Query: 252 LSGKPDIAMRRLMQGF 267 ++ + + + MQ F Sbjct: 230 VTNEREAVGQSAMQAF 245 >gi|188532303|ref|YP_001906100.1| glutamate racemase [Erwinia tasmaniensis Et1/99] gi|229486272|sp|B2VGA6|MURI_ERWT9 RecName: Full=Glutamate racemase gi|188027345|emb|CAO95190.1| Glutamate racemase [Erwinia tasmaniensis Et1/99] Length = 283 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 145/261 (55%), Gaps = 4/261 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L+ ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + + + Sbjct: 20 LRPTVLIFDSGVGGLSVYNEIRTLLPDLHYLYAFDNVAFPYGEKSEAFIVERVLDIVTAV 79 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T Sbjct: 80 TGLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT L+ + +C ++ S L E G + +E+++ ++ + + Sbjct: 139 VKRPYTHELVARFAGECKTEMLGSGELVDIAEAKLHGQPVAIEEVRRILQPWL--RMAEP 196 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL Sbjct: 197 PDTVVLGCTHFPLISEELQQVLPQGTRLIDSGAAIARRTVWLLENESPEVLSADDNMALC 256 Query: 252 LS-GKPDIAMRRLMQGFGLKS 271 L + + + ++Q +G K+ Sbjct: 257 LEITEQTVQLIPVLQRYGFKT 277 >gi|323974257|gb|EGB69387.1| glutamate racemase [Escherichia coli TW10509] Length = 289 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 250 AKSADVNIAFCMAMTPEAEQLLPVLQRYGFET 281 >gi|309791176|ref|ZP_07685708.1| glutamate racemase [Oscillochloris trichoides DG6] gi|308226738|gb|EFO80434.1| glutamate racemase [Oscillochloris trichoides DG6] Length = 256 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 120/253 (47%), Gaps = 8/253 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P++ +Y+AD PYG ++ R + +L + Sbjct: 2 IGVFDSGLGGLSVLRAIRERLPDHDLLYLADSAYCPYGPRPAAEVRVRAQVCANWLL-QQ 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA + D+LR+ P + +G P +K A A +++G + +L+T TLR Sbjct: 61 GADLIVIACNTATSAAADQLRAELP-VPVIGLEPGLKPAIAASRNGRVGVLATSGTLRGE 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NL+ + S+ I + S L VE E++ + G + D + Sbjct: 120 RFMNLVRRFASRAQIFTMPSPDLVGYVEAGDLNGP----EVRAALTGYLEPLRSQGVDAV 175 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+P + + +L+ ++ +D ++A + ++ +G Sbjct: 176 VLGCTHFPFLRPLIAELAGPEIEIIDTGPAVAEQVSRIVEVYAI--DPDGGTLRFATTGD 233 Query: 256 PDIAMRRLMQGFG 268 P+ L++ +G Sbjct: 234 PEAVGPPLVRIWG 246 >gi|168334522|ref|ZP_02692683.1| glutamate racemase [Epulopiscium sp. 'N.t. morphotype B'] Length = 267 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 15/270 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I IFDSG+GGL V++++ + +Y D PYGN + K Sbjct: 1 MDNRP--------IGIFDSGLGGLTVVKEVMKQLTNESIVYFGDTARVPYGNKSKSTVTK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + +L K +IACNT + ELR FP + G V P + A+ T++G Sbjct: 53 FSAQIIRFLLSK-DVKAIIIACNTVNSNCAIELRELFPELMIEGVVGPGVIMASRATKNG 111 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ T T++ + + + I + + VE+ ++ K I Sbjct: 112 RIGVIGTEGTVKSGRYAERLREIHPEYQIFSKACPLFVPLVEDGWTNTEVA----KMVIA 167 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 E + D ++L CTHYP++ + + + ++ ++ A + L + N Sbjct: 168 TYLNELLEEDIDTLILGCTHYPILSEDIQAVVGKHIKLINPANETAYQMGLHLLQENIQA 227 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 + H ++S + G K+ Sbjct: 228 VAIPSYH-FYVSDHKEQMQDMAKMFLGCKT 256 >gi|108758013|ref|YP_633888.1| glutamate racemase [Myxococcus xanthus DK 1622] gi|27804816|gb|AAO22860.1| glutamate racemase [Myxococcus xanthus] gi|108461893|gb|ABF87078.1| glutamate racemase [Myxococcus xanthus DK 1622] Length = 271 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 7/263 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + I +FDSG+GGL VL+ + +P +Y+ D PYG + + + Sbjct: 1 MRQGSHSPIGVFDSGVGGLTVLKALMARLPHESTVYLGDTARVPYGTKSGEVVTRYSLKN 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +L++ L V+ACNTA + L + P +P + A A TQ G + I+ Sbjct: 61 AEFLLERG-IKLLVVACNTASAVALPALEAALPVPVVGVILPGARAALARTQGGGVGIIG 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP T+R + S + + + EE + + E Sbjct: 120 TPGTIRSGAYQRALESADPRVRAKARACPLFVPLAEEGWTTGDVPLLVAR----DYLAEF 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVF 245 D +VL CTHYPL+ V ++ V +D++++ A LL + +R Sbjct: 176 TRDGVDTLVLGCTHYPLLKGVIAEVVGPQVALVDSAEATADAVAALLSERDGLAPASRGT 235 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 +HA +++ P+ M + G Sbjct: 236 PEHAYYVTDVPERFMEVGARFLG 258 >gi|158317397|ref|YP_001509905.1| glutamate racemase [Frankia sp. EAN1pec] gi|229486274|sp|A8L764|MURI_FRASN RecName: Full=Glutamate racemase gi|158112802|gb|ABW14999.1| glutamate racemase [Frankia sp. EAN1pec] Length = 276 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL V + + +P +Y+ D PYG +++ + +++ Sbjct: 4 APIGVFDSGVGGLTVARAILDQLPGESLLYIGDTAHAPYGPRPIAEVRRYALAALDELVS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 L VIACN+A + R + VPA ++A A T+SG + ++ T AT+ Sbjct: 64 AG-VKLLVIACNSASAACLRDARERYDVPVVEVIVPATRRAVAATRSGRVGVIGTVATIT 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + + V+ VE + ++ E + D Sbjct: 123 SRAYEDA-FAAAAGTELVSVACPAFVDFVERGITSGR----QLLGLTEAYLAPLQEADVD 177 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALF 251 ++L CTHYPL+ V + V + +++ A+ +L R + H Sbjct: 178 TVILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLARDGLFRDPDLPPPAHRFL 237 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P R + G Sbjct: 238 TTGDPAAFARVGRRFLG 254 >gi|145222944|ref|YP_001133622.1| glutamate racemase [Mycobacterium gilvum PYR-GCK] gi|145215430|gb|ABP44834.1| glutamate racemase [Mycobacterium gilvum PYR-GCK] Length = 278 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 12/267 (4%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 I IFDSG+GGL V + + +P IYV D PYG ++ + + Sbjct: 1 MNPDAMRPIGIFDSGVGGLTVARAVIDQLPHEDIIYVGDTGNGPYGPLTIPQIRAHALAI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 D+ + VIACN+A + + R + + + + PA+++A A T++G I ++ Sbjct: 61 GDDLAGRG-IKALVIACNSASSACLRDARERYAPIPVVEVILPAVRRAVAATRNGRIGVI 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT+ + + + V+ VE + ++ E Sbjct: 120 GTAATIASGAYQDSFAA-ARDIEVFGVACPRFVDFVERGVTSGR----QVLGLAEAYLEP 174 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + + D +VL CTHYP++ + + V + +++ A+ +L + D Sbjct: 175 LQRAQVDTLVLGCTHYPMLSGLIQLAMGDHVTLVSSAEETAKDLLRVLTERELLKPHTGD 234 Query: 247 DHA-----LFLSGKPDIAMRRLMQGFG 268 A +G P+ + G Sbjct: 235 PAAPARRVFEATGDPEAFTALAARFLG 261 >gi|117918638|ref|YP_867830.1| glutamate racemase [Shewanella sp. ANA-3] gi|166231054|sp|A0KRK5|MURI_SHESA RecName: Full=Glutamate racemase gi|117610970|gb|ABK46424.1| glutamate racemase [Shewanella sp. ANA-3] Length = 273 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 12/267 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R L+P + + Y+ D+ PYG E+ L + L + Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHDYCYLFDNARLPYGELEEQELISGCVALIDQV 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + CH+ L S L E+ ++ + Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQKIATGQLD----MVRLTQVLSPIVEAD 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---- 247 DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + + +D Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGQGVTLLDSGEAIAKRVKTLLAETKSDEQVQEEDAHSN 235 Query: 248 ---HALFLSGKPDIAMRRLMQGFGLKS 271 A + + + + G + Sbjct: 236 LLMQAFYTKAEISEGLATTLVDCGFST 262 >gi|193213389|ref|YP_001999342.1| glutamate racemase [Chlorobaculum parvum NCIB 8327] gi|229486233|sp|B3QQD9|MURI_CHLP8 RecName: Full=Glutamate racemase gi|193086866|gb|ACF12142.1| glutamate racemase [Chlorobaculum parvum NCIB 8327] Length = 272 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 8/256 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSGIGGL VL+ ++ +P +Y D PYG ++K +++L Sbjct: 10 SPIGIFDSGIGGLTVLKAVQAALPSERLLYFGDTARVPYGTKSQVTIRKYARE-DTELLM 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATL 132 K+QP L ++ACNT L D + T + +G + A + AA T+SG I ++ T AT+ Sbjct: 69 KHQPKLIIVACNTVSALALDVVEQTAGDILVIGVLKAGAELAAHRTKSGRIGVIGTQATI 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 S I + + + EE I + E GK Sbjct: 129 GSNAYSCAIREENDALEVTPKACPLFVPLAEEGF----IDHPATRLVAEEYLSAFTGKEI 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALF 251 D +VL CTHYP++ V ++ + +D+++++A +A+ LL + L Sbjct: 185 DTLVLGCTHYPILRKVIESIAGPQITIIDSAEAVASKAKELLSKHGLLNQSSATTLPHLM 244 Query: 252 LSGKPDIAMRRLMQGF 267 +S P R L + F Sbjct: 245 VSDLPQKF-RELYRLF 259 >gi|308177066|ref|YP_003916472.1| glutamate racemase [Arthrobacter arilaitensis Re117] gi|307744529|emb|CBT75501.1| glutamate racemase [Arthrobacter arilaitensis Re117] Length = 307 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 106/264 (40%), Gaps = 11/264 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + I IFDSG+GGL V + + +P +YV D PYG ++ + + Sbjct: 13 PEANTPIGIFDSGVGGLTVARAIIDQLPGESLVYVGDTANSPYGPLPIAQVRANALGVMD 72 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISI 125 +++D L VIACN+A + + R + + + + PA+++A A T++G I I Sbjct: 73 ELVD-GGVKLLVIACNSASAAVLRDARERYTARYGIPVVEVIQPAVRRAVAGTKNGKIGI 131 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 + T AT+ + + + V+ VE E+ + + Sbjct: 132 IGTQATVGSRAYEDAFAA-APNLQVSTVACPRFVEFVESGIT----AGAELLEIAQEYLA 186 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRV 244 + + D +VL CTHYPL+ V + V + +++ A+ L R + Sbjct: 187 PLQAAQVDTLVLGCTHYPLLTGVISYVMGDSVTLVSSAEETAKDVFRALTRHSLVRNDGA 246 Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268 H +G D + G Sbjct: 247 AARHEFLATGNADSFGVLARRFLG 270 >gi|331685713|ref|ZP_08386296.1| glutamate racemase [Escherichia coli H299] gi|323964327|gb|EGB59810.1| glutamate racemase [Escherichia coli M863] gi|331077184|gb|EGI48399.1| glutamate racemase [Escherichia coli H299] Length = 289 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281 >gi|319892140|ref|YP_004149015.1| Glutamate racemase [Staphylococcus pseudintermedius HKU10-03] gi|317161836|gb|ADV05379.1| Glutamate racemase [Staphylococcus pseudintermedius HKU10-03] gi|323464749|gb|ADX76902.1| glutamate racemase [Staphylococcus pseudintermedius ED99] Length = 265 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I + DSG+GGL V +++ +P Y+ D PYG + +KK + + + + Sbjct: 1 MDRPIGVMDSGVGGLTVAKEIMRQLPNETIYYLGDVARCPYGPRDQEEVKKFTIEMANYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 + +Y + VIACNTA + + L+ + +G + P + A T++ + +L T Sbjct: 61 V-QYDIKMLVIACNTATAVALEPLQEQLK-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ I ++ V+ VEE + + I Sbjct: 119 TIKSEAYRTHIKKINPHVDVYGVACPGFVPLVEEMKYKDPTITNIV---IHQTLKSWRQT 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249 D ++L CTHYPL+ + + AR LL + H H Sbjct: 176 EADTVILGCTHYPLLYQPIFDYFGKTKTVISSGLETAREVSALLTFSHEHAHYTPQPKHR 235 Query: 250 LFLSGKPDIAMRRLMQGF 267 F +G+ + + Sbjct: 236 FFANGEVRHMTYIIQEWL 253 >gi|331680091|ref|ZP_08380753.1| glutamate racemase [Escherichia coli H591] gi|332282913|ref|ZP_08395326.1| glutamate racemase [Shigella sp. D9] gi|323943616|gb|EGB39723.1| glutamate racemase [Escherichia coli H120] gi|324115516|gb|EGC09457.1| glutamate racemase [Escherichia coli E1167] gi|331072417|gb|EGI43750.1| glutamate racemase [Escherichia coli H591] gi|332105265|gb|EGJ08611.1| glutamate racemase [Shigella sp. D9] Length = 289 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281 >gi|299131717|ref|ZP_07024912.1| glutamate racemase [Afipia sp. 1NLS2] gi|298591854|gb|EFI52054.1| glutamate racemase [Afipia sp. 1NLS2] Length = 265 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 109/256 (42%), Positives = 154/256 (60%), Gaps = 4/256 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +IL+FDSG+GGL VL+++ P+ + YVADD FPYG E+ A+ R++ L D++ Sbjct: 4 SPAILVFDSGLGGLTVLREITTARPDAAYTYVADDAFFPYGRHEESAIIARVVPLIGDLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ P L VIACNTA TL+ D LR + S+ F+G VPAIK A A +++ +S+L T T+ Sbjct: 64 GRHTPDLVVIACNTASTLVMDHLRKAY-SVPFVGTVPAIKPACASSKTKRVSVLGTRGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI + C + LV + LA+ E G + +D I EI CFIE RT Sbjct: 123 KREYTKKLIADFAHDCEVTLVGAGNLATLAEAALRGESVSDDAILAEIAPCFIE-GSPRT 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VLACTHYPL++ R+++PW VDW+D + +IARR LL + LF Sbjct: 182 DTVVLACTHYPLLLEQIRRIAPWTVDWIDPAPAIARRVESLLDKSENENIPAPAKF-LFT 240 Query: 253 SGK-PDIAMRRLMQGF 267 SGK P A+ R +Q F Sbjct: 241 SGKSPSPALMRALQPF 256 >gi|304412675|ref|ZP_07394279.1| glutamate racemase [Shewanella baltica OS183] gi|307307285|ref|ZP_07587022.1| glutamate racemase [Shewanella baltica BA175] gi|304349019|gb|EFM13433.1| glutamate racemase [Shewanella baltica OS183] gi|306910340|gb|EFN40772.1| glutamate racemase [Shewanella baltica BA175] Length = 274 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 11/256 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+ Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCIALVCDL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + CH+ L L E+ ++ + + Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEERR------ 229 Query: 252 LSGKPDIAMRRLMQGF 267 ++ + + MQ F Sbjct: 230 VTNEREALGESAMQAF 245 >gi|126176362|ref|YP_001052511.1| glutamate racemase [Shewanella baltica OS155] gi|166231051|sp|A3DA79|MURI_SHEB5 RecName: Full=Glutamate racemase gi|125999567|gb|ABN63642.1| glutamate racemase [Shewanella baltica OS155] Length = 274 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 11/256 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+ Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + CH+ L L E+ ++ + + Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGQMD----MHRLADLLAPVVAAQ 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEERR------ 229 Query: 252 LSGKPDIAMRRLMQGF 267 ++ + + MQ F Sbjct: 230 VTNERETLGESAMQAF 245 >gi|322515537|ref|ZP_08068520.1| glutamate racemase [Actinobacillus ureae ATCC 25976] gi|322118406|gb|EFX90666.1| glutamate racemase [Actinobacillus ureae ATCC 25976] Length = 265 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 135/261 (51%), Gaps = 6/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AA +++ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAVVSETKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y + LI Y C + + S L VEE ++ ++++ + I + Sbjct: 120 VERPYVAELIEKYAKDCVVEKIGSTTLVELVEEKIRTGQVDQEQLGEVITEW---QTHPT 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSDLLSEFSQENSAQNRENIAF 236 Query: 252 LSGKPDIAMRR--LMQGFGLK 270 + + +R +MQ +G K Sbjct: 237 CTKMDEEFSKREVIMQQWGFK 257 >gi|121637269|ref|YP_977492.1| glutamate racemase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989743|ref|YP_002644430.1| glutamate racemase [Mycobacterium bovis BCG str. Tokyo 172] gi|166231041|sp|A1KIC8|MURI_MYCBP RecName: Full=Glutamate racemase gi|254766119|sp|C1AMY3|MURI_MYCBT RecName: Full=Glutamate racemase gi|121492916|emb|CAL71387.1| Probable glutamate racemase murI [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772856|dbj|BAH25662.1| glutamate racemase [Mycobacterium bovis BCG str. Tokyo 172] Length = 271 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ Sbjct: 6 APVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVG 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACN+A + + R + +PA+++A A T++G I ++ T AT+ Sbjct: 66 RGVKAL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATIT 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + I V+ VE + ++ +G + D Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVELGVTSGR----QVLGLAQGYLEPLQRAEVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251 +VL CTHYPL+ + + V + +++ A+ +L I+ + Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFE 239 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P+ + + G Sbjct: 240 ATGDPEAFTKLAARFLG 256 >gi|256829170|ref|YP_003157898.1| glutamate racemase [Desulfomicrobium baculatum DSM 4028] gi|256578346|gb|ACU89482.1| glutamate racemase [Desulfomicrobium baculatum DSM 4028] Length = 272 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 5/248 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSGIGGL VL+ + +P+ F+Y+ D PYG ++ + ++ + +L Sbjct: 9 PIGVFDSGIGGLTVLKALTEALPKESFLYLGDTARLPYGTKSAKSVTRYVLQ-TTALLKA 67 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA + + L+ +P + +G + P + A +++G I ++ T +T+ Sbjct: 68 RGIKLLVIACNTATGVSLEALQEAYPELPVIGVIRPGAEAACRSSRNGRIGVIGTESTVN 127 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + + + EE C +I ++ + G D Sbjct: 128 ARGYEREILRIRPDAQVFAQACPLFVPLAEEGWCDGQIASLVAERYLGGLV---RDTGID 184 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTH+P++ + + V +D++ + A + +L R + T + Sbjct: 185 TLVLGCTHFPVLADAIQDVVGPDVTLVDSARTTAEFVQDMLERRDICSTTKERCLTFLAT 244 Query: 254 GKPDIAMR 261 R Sbjct: 245 DGARRFAR 252 >gi|15602782|ref|NP_245854.1| glutamate racemase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431696|sp|P57887|MURI_PASMU RecName: Full=Glutamate racemase gi|12721236|gb|AAK03001.1| MurI [Pasteurella multocida subsp. multocida str. Pm70] Length = 269 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 140/260 (53%), Gaps = 7/260 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +IL FDSG+GG V ++ + L+P+ H++Y D+ FPY + + +R + + I Sbjct: 6 QPTILFFDSGMGGFSVYKETKQLLPDCHYLYCFDNAFFPYSEKSEEEIIQRTLKICQKID 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA T++ LR+ F ++ +G VPAIK AA +++ I +L+T T+ Sbjct: 66 RTFPLDLIVIACNTASTVVLPALRAHF-AIPVVGTVPAIKPAAECSETKHIGLLATKGTV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R Y ++LI Y C + + S L E+ G + +K+E+ + + Sbjct: 125 KRAYVADLIAQYARDCTVEKLGSTKLVEIAEQKLHGKAVDLHALKQELAPW---QSIQNL 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTH+PLI + P ++D+ +IA R + LL +I+ Q++ + + +F Sbjct: 182 DTVVLGCTHFPLIKEEIKWCLPQVRFFVDSGKAIALRVKTLLSKIDI-QSKTNEKNLIFC 240 Query: 253 SG--KPDIAMRRLMQGFGLK 270 + + + ++++ +G + Sbjct: 241 TQFFEDETQFQKVIHFWGFE 260 >gi|187929182|ref|YP_001899669.1| glutamate racemase [Ralstonia pickettii 12J] gi|229486249|sp|B2U6V5|MURI_RALPJ RecName: Full=Glutamate racemase gi|187726072|gb|ACD27237.1| glutamate racemase [Ralstonia pickettii 12J] Length = 282 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 6/248 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + + Sbjct: 1 MTTRAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEYIADRTLRV 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+ Sbjct: 61 CEWLVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T +TLR + L+ C + L +E + + + Sbjct: 119 TESTLRSEKFARLLAGASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLRAYLQPM 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D +VL CTHYP + +++ + +D ++AR L + Sbjct: 175 LDANADTLVLGCTHYPFLEDAIHEIAGDRLTLIDTGHAVARHLGRTLAAAGLQASGQAAT 234 Query: 248 HALFLSGK 255 +G Sbjct: 235 PCFMSTGD 242 >gi|313667842|ref|YP_004048126.1| glutamate racemase [Neisseria lactamica ST-640] gi|313005304|emb|CBN86737.1| glutamate racemase [Neisseria lactamica 020-06] gi|325202734|gb|ADY98188.1| glutamate racemase [Neisseria meningitidis M01-240149] Length = 270 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 241 YVSDIPLKFRTIGERFLG 258 >gi|331665623|ref|ZP_08366521.1| glutamate racemase [Escherichia coli TA143] gi|331057308|gb|EGI29298.1| glutamate racemase [Escherichia coli TA143] Length = 289 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G K+ Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFKT 281 >gi|315443407|ref|YP_004076286.1| glutamate racemase [Mycobacterium sp. Spyr1] gi|315261710|gb|ADT98451.1| glutamate racemase [Mycobacterium sp. Spyr1] Length = 278 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 106/267 (39%), Gaps = 12/267 (4%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 I IFDSG+GGL V + + +P+ IYV D PYG ++ + + Sbjct: 1 MNPDAMRPIGIFDSGVGGLTVARAVIDQLPDEDIIYVGDTGNGPYGPLTIPQIRAHALAI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 D+ + VIACN+A + + R + + + + PA+++A A T++G I ++ Sbjct: 61 GDDLAGRG-IKALVIACNSASSACLRDARERYAPIPVVEVILPAVRRAVAATRNGRIGVI 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT+ + + + V+ VE + ++ E Sbjct: 120 GTAATIASGAYQDSFAA-ARDIEVFGVACPRFVDFVERGVTSGR----QVLGLAEAYLEP 174 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + + D +VL CTHYP++ + + V + +++ A+ +L + D Sbjct: 175 LQRAQVDTLVLGCTHYPMLSGLIQLAMGDHVTLVSSAEETAKDLLRVLTERELLKPHTGD 234 Query: 247 DHA-----LFLSGKPDIAMRRLMQGFG 268 A +G P+ + G Sbjct: 235 PAAPARRVFEATGDPEAFTALAARFLG 261 >gi|312199600|ref|YP_004019661.1| glutamate racemase [Frankia sp. EuI1c] gi|311230936|gb|ADP83791.1| glutamate racemase [Frankia sp. EuI1c] Length = 343 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V + + +P +Y D PYG +++ + ++ Sbjct: 3 DAPIGVFDSGVGGLTVARAILDQLPHEPLLYFGDTAHAPYGPRPIAEVRRLALDAMDTLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA + R + +PA ++A A T+SG + ++ T AT+ Sbjct: 63 AEG-VKLLVIACNTASAACLRDARERYDVPVVEVVLPAARRAVAATRSGRVGVIGTVATI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + VS VE ++ E + Sbjct: 122 TSRAYDDAVAA-APDVTLTSVSCPAFVDFVERG----TTAGRQLLGLAEAYLAPLQEADV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250 D ++L CTHYPL+ V + V + +++ A+ +L R + H Sbjct: 177 DTLILGCTHYPLLTGVIGLVMGESVTLVSSAEETAKDTYRVLARGGLFRDPELPPPVHRF 236 Query: 251 FLSGKPDIAMRRLMQGFG 268 +G P R + G Sbjct: 237 LATGDPRSFTRIGRRFLG 254 >gi|300780581|ref|ZP_07090436.1| glutamate racemase [Corynebacterium genitalium ATCC 33030] gi|300533567|gb|EFK54627.1| glutamate racemase [Corynebacterium genitalium ATCC 33030] Length = 284 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 7/257 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG GGL V + + +P IY+ D PYG ++ M + D++ Sbjct: 18 NAPIGIFDSGFGGLTVARSVMDQLPGESVIYIGDGANGPYGPKPLAEVRGHAMAIADDLV 77 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA + R + PA+++A A T++G + ++ T AT+ Sbjct: 78 ERG-CKMIVIACNTASAAFLHDARERYSVPVIEVIKPAVRRAVATTRNGKVGVIGTQATI 136 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R +L S + VE ++ +G + Sbjct: 137 RSGVYQDLF-SLAPGIEATAAACPAFVEFVEAGVT----HGRQVLGVAQGYVEPLQAAGV 191 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251 D +VL CTHYPL+ V + V + +++ A+ +L + + F Sbjct: 192 DTLVLGCTHYPLLSGVIQLAIGDDVTLVSSAEETAKDVLRILTERDMFADVDHEPARTFE 251 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P+ R + G Sbjct: 252 STGDPEPFHRLGPRFLG 268 >gi|145589323|ref|YP_001155920.1| glutamate racemase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047729|gb|ABP34356.1| glutamate racemase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 268 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 6/242 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL +L + +PE ++Y+AD PYG + +R + L L Sbjct: 4 IGVFDSGVGGLSILDEALRQLPENDYLYLADSANAPYGERSSDWIAQRSLALCRY-LANE 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA E+R+ S+ +G P IK AA +TQ+G++ +L+T ATL+ Sbjct: 63 GCDAIVVACNTATAQAIQEIRAQL-SIPVIGVEPGIKPAAMHTQNGIVGVLATEATLKSD 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + S C + L +E + + + K +E + +D I Sbjct: 122 KFNALLATLPSNCRFIKQAGEGLVPLIESGNANSEETLELLAKHLE----PIQDAGSDTI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYP + R+L + +D SD++ R+ + L + T+ F+S K Sbjct: 178 VLGCTHYPFLRKSIRKLLGDSITLIDTSDAVVRQLKRQLELLQNLSTKKDVGSVTFISSK 237 Query: 256 PD 257 + Sbjct: 238 NE 239 >gi|253999852|ref|YP_003051915.1| glutamate racemase [Methylovorus sp. SIP3-4] gi|253986531|gb|ACT51388.1| glutamate racemase [Methylovorus sp. SIP3-4] Length = 273 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 6/230 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + +FDSG+GGL VL +R +P+ IY AD + PYG+ + R + L ++ Sbjct: 11 DSPVGVFDSGVGGLSVLAHIRQALPQELLIYAADSMHAPYGSKSQAFIIDRAIQLSDFLI 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA ELRS + + +G PA+K AAA T+SG+I +L+T TL Sbjct: 71 SRGAKAL-VVACNTATAAAISELRSRY-VIPIIGMEPAVKPAAAATRSGVIGVLATSGTL 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ SY Q + + + L +E +++ ++ +E Sbjct: 129 QSAQFAALLESYGRQVRVETQACVGLVECIERG----ELQTAATRQLLEKYIQPLLEAGA 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTHYP + + +L+ V +D ++AR+ + L + + Sbjct: 185 DTLVLGCTHYPFVRPLIEELAGPEVAIIDTGAAVARQLKHRLQEADLLKD 234 >gi|237745618|ref|ZP_04576098.1| glutamate racemase [Oxalobacter formigenes HOxBLS] gi|229376969|gb|EEO27060.1| glutamate racemase [Oxalobacter formigenes HOxBLS] Length = 273 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 16/264 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL VL+ +R +P + IY AD PYG+ + + +R + L Sbjct: 5 SGPIGVFDSGVGGLSVLRHIRSQLPGENLIYFADSGYAPYGDKSEEFVIERAFKIAGFFL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K V+ACNTA + LR +P + +G P +K AAA T +G++ +++T TL Sbjct: 65 -KQGIKALVVACNTATAITIHLLREKYPELPIVGVEPGLKPAAAKTITGIVGVMATERTL 123 Query: 133 RRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 L Q H + +A +E ++ + + + + Sbjct: 124 ASNKFHVLHQLLNDQTGVHFIMQPCPGMADLIEH----EELDSEPVFNLVRRYLTPILEQ 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLP--RINTHQTRV 244 D +VL CTHYP + HV +++ + +D ++AR+ + LL +N+ Sbjct: 180 NADTVVLGCTHYPFVRHVIEKIAAEAGNPSLHIIDTGYAVARQLKHLLDIYGLNSKGRET 239 Query: 245 FDDHALFLSGKPDIAMR---RLMQ 265 A F SG P R RL+Q Sbjct: 240 DIQTAAFTSGDPQTISRLIGRLLQ 263 >gi|260892383|ref|YP_003238480.1| glutamate racemase [Ammonifex degensii KC4] gi|260864524|gb|ACX51630.1| glutamate racemase [Ammonifex degensii KC4] Length = 265 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 9/255 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL ++ L+P +Y AD + PYG+ L + +L Sbjct: 5 RPIGLFDSGVGGLTVLAQIVRLLPHESIVYFADTLNLPYGDKTPAELIALGDRIIRFLLA 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATL 132 + V ACNT+ ++ + L+ +P + LG + A + A ++ G I IL+T AT+ Sbjct: 65 QG-VKCVVFACNTSSSISLEVLQQRYP-VPMLGLLQAGARLALKSSRRGRIGILATAATV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I Q + ++ L +E +I E + + + Sbjct: 123 KSGAYEKAIKDLCPQAQVFSQAAPRLVPLIESG----EIDTPEAEAALREYLTPLKEAGI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++ CTHYP + + V +D + ++ + LL + H +F+ Sbjct: 179 DTLIFGCTHYPFLAPLISSFMGPGVALVDPAVAVVEELKELLSQKGLLANST-PFHRIFV 237 Query: 253 SGKPDIAMRRLMQGF 267 SG P+ RL + Sbjct: 238 SGDPESF-DRLARRL 251 >gi|255534473|ref|YP_003094844.1| Glutamate racemase [Flavobacteriaceae bacterium 3519-10] gi|255340669|gb|ACU06782.1| Glutamate racemase [Flavobacteriaceae bacterium 3519-10] Length = 282 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 7/259 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I IFDSG+GGL V ++++ L+P + IY D PYG A+ + + Sbjct: 19 PDQPIGIFDSGVGGLTVAKEIKRLLPNENLIYFGDTKHLPYGEKSRDAIVGYSTKITRFL 78 Query: 72 LDKYQPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L+K VIACN+A E L + + + + + AY + +++T A Sbjct: 79 LEK-NCKAIVIACNSATANALKEVLDEVADRVPVIDVINPVAEKVAYEIHNNVGVIATKA 137 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ I + + +++ +L +EE I + + K Sbjct: 138 TVNSGLYRKSIRKHNKFIKVDELATPLLVPAIEEGFKNHPITH----SIVYNYLSNNKLK 193 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HA 249 + ++L CTHYPL++ RQ V +D+ +A + R +L + + + + Sbjct: 194 NIETLILGCTHYPLLIDEIRQYYGNRVRVIDSPGIVANQLRIILDKHQLLNAKNSNTAYQ 253 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +LS + + FG Sbjct: 254 FYLSDLTKNFEKISKKFFG 272 >gi|313835875|gb|EFS73589.1| glutamate racemase [Propionibacterium acnes HL037PA2] gi|314927125|gb|EFS90956.1| glutamate racemase [Propionibacterium acnes HL044PA1] gi|314970768|gb|EFT14866.1| glutamate racemase [Propionibacterium acnes HL037PA3] gi|328906033|gb|EGG25808.1| glutamate racemase [Propionibacterium sp. P08] Length = 284 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG ++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRHYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A++ T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASSATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VEE E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIARQYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L +R + Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLIAYVLGDDVTLISSSHQCARASYSLTAESGLLHSRPRE 237 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 238 SSRYFLTTGNAERFERLGRRLMEGF 262 >gi|189345889|ref|YP_001942418.1| glutamate racemase [Chlorobium limicola DSM 245] gi|189340036|gb|ACD89439.1| glutamate racemase [Chlorobium limicola DSM 245] Length = 274 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 7/260 (2%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + + + ++ I IFDSG+GGL V++ M+ ++P IY D PYG+ ++K Sbjct: 1 MQTHQHKTAPESPIGIFDSGVGGLTVVRAMQAILPAERLIYFGDTARVPYGSKSQVTIRK 60 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSG 121 + IL +YQP + ++ACNT L D + T ++ +G + A Q A + ++ Sbjct: 61 YAHD-DTAILMRYQPKMIIVACNTVSALALDVVEKTCGNIPVIGVLEAGAQLAVSRSEHK 119 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ T AT+ + I+ S+ +H + + EE + Sbjct: 120 RIGVIGTQATVCSNAYACAINMLDSEVTVHSKACPLFVPLAEEGFT----DHPATRLIAA 175 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +G D +VL CTHYP++ + Q + +D+++++A RA+ LL Sbjct: 176 EYLRAFDGHDIDTLVLGCTHYPILRSMIEQTIGPDIRIIDSAEAVACRAKELLTETGMLN 235 Query: 242 -TRVFDDHALFLSGKPDIAM 260 T ++ L +S P Sbjct: 236 TTSETENPHLLVSDLPQKFS 255 >gi|261879009|ref|ZP_06005436.1| glutamate racemase [Prevotella bergensis DSM 17361] gi|270334393|gb|EFA45179.1| glutamate racemase [Prevotella bergensis DSM 17361] Length = 281 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 11/259 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + Q +I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + + + Sbjct: 8 QKQGAIGVFDSGYGGLTILHGIRRLLPQYDYIYLGDNARAPYGPRSFDVVYEFTRQSVAK 67 Query: 71 ILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124 + L +I CNTA +L P LG + P + T++ + Sbjct: 68 LFA-MGCQLVIIGCNTASAKALRSIQQNDLPQWDPDRRVLGIIRPTAEVIGQLTRNNHVG 126 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+T T++ + I Q + + VE + +KK I+ Sbjct: 127 LLATEGTVKSQSYNMEIAKLWPQIQVTGQACPFWVLLVEYNEADSPGADYFVKKRIDQ-- 184 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + + D I+L CTH+PL++ ++ V + D +A+ + L R + R+ Sbjct: 185 LMQLDPDIDTIILGCTHFPLLMPKIQKYVKPNVRIVPQGDYVAKSLKAYLERHQDMEARL 244 Query: 245 --FDDHALFLSGKPDIAMR 261 + F + P+ Sbjct: 245 TRHGTVSYFTTENPEKFKE 263 >gi|171911183|ref|ZP_02926653.1| glutamate racemase [Verrucomicrobium spinosum DSM 4136] Length = 271 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 10/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +FDSG+GGL V++ + L+P IY+ D PYG+ ++K + +L Sbjct: 7 NAPLGVFDSGVGGLTVVRALLDLLPNESIIYLGDTARVPYGSKSPDTIRKFSVEDTQFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K V+ACNTA +LR F P ++ A + I+ T T+ Sbjct: 67 SKG-VKAVVVACNTATAHALPQLRQMFRVPVVGVLEPGVEATLADPACQRVGIIGTAGTI 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + I+ ++ +L VEE I K + K Sbjct: 126 KSHAYQHELAMRRPDLQIYAEATPLLVPLVEEDW----IDHPATKMVLREYLKPMLDKGM 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251 D +VL CTHYPL+ + +++ V +D++ + A + +L +T + ++ Sbjct: 182 DTLVLGCTHYPLLKPLLKRILNNKVRMVDSALTCAEHVKRMLAEQGLERTAKGKPKLEVY 241 Query: 252 LSG----KPDIAMRRLMQGFG 268 L+ ++A R L FG Sbjct: 242 LTDLSEHSEELAKRFLHTEFG 262 >gi|32035119|ref|ZP_00135171.1| COG0796: Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209303|ref|YP_001054528.1| glutamate racemase [Actinobacillus pleuropneumoniae L20] gi|303251132|ref|ZP_07337316.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253526|ref|ZP_07535396.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|166231024|sp|A3N3D7|MURI_ACTP2 RecName: Full=Glutamate racemase gi|126098095|gb|ABN74923.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302649983|gb|EFL80155.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859027|gb|EFM91070.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 265 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 6/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y + LI Y C + + + L VEE + +D + K + + Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEW---QTHPT 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+PL+ +QL P ++D + IA R LL + ++ F Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIAF 236 Query: 252 LSGKPDIAMRR--LMQGFGLK 270 + + +R +MQ +G K Sbjct: 237 CTKIDEEFFKREVIMQQWGFK 257 >gi|157157092|ref|YP_001465466.1| glutamate racemase [Escherichia coli E24377A] gi|157163444|ref|YP_001460762.1| glutamate racemase [Escherichia coli HS] gi|209921453|ref|YP_002295537.1| glutamate racemase [Escherichia coli SE11] gi|218556530|ref|YP_002389444.1| glutamate racemase [Escherichia coli IAI1] gi|218697683|ref|YP_002405350.1| glutamate racemase [Escherichia coli 55989] gi|256021672|ref|ZP_05435537.1| glutamate racemase [Shigella sp. D9] gi|260846776|ref|YP_003224554.1| glutamate racemase MurI [Escherichia coli O103:H2 str. 12009] gi|260858085|ref|YP_003231976.1| glutamate racemase MurI [Escherichia coli O26:H11 str. 11368] gi|260870687|ref|YP_003237089.1| glutamate racemase MurI [Escherichia coli O111:H- str. 11128] gi|293472282|ref|ZP_06664692.1| glutamate racemase [Escherichia coli B088] gi|307314705|ref|ZP_07594302.1| glutamate racemase [Escherichia coli W] gi|331670825|ref|ZP_08371661.1| glutamate racemase [Escherichia coli TA271] gi|167017315|sp|A7ZUI7|MURI_ECO24 RecName: Full=Glutamate racemase gi|167017316|sp|A8A775|MURI_ECOHS RecName: Full=Glutamate racemase gi|226707585|sp|B6I5I5|MURI_ECOSE RecName: Full=Glutamate racemase gi|226722985|sp|B7M723|MURI_ECO8A RecName: Full=Glutamate racemase gi|254766114|sp|B7LA65|MURI_ECO55 RecName: Full=Glutamate racemase gi|157069124|gb|ABV08379.1| glutamate racemase [Escherichia coli HS] gi|157079122|gb|ABV18830.1| glutamate racemase [Escherichia coli E24377A] gi|209914712|dbj|BAG79786.1| glutamate racemase [Escherichia coli SE11] gi|218354415|emb|CAV01209.1| glutamate racemase [Escherichia coli 55989] gi|218363299|emb|CAR00948.1| glutamate racemase [Escherichia coli IAI1] gi|257756734|dbj|BAI28236.1| glutamate racemase MurI [Escherichia coli O26:H11 str. 11368] gi|257761923|dbj|BAI33420.1| glutamate racemase MurI [Escherichia coli O103:H2 str. 12009] gi|257767043|dbj|BAI38538.1| glutamate racemase MurI [Escherichia coli O111:H- str. 11128] gi|291321376|gb|EFE60816.1| glutamate racemase [Escherichia coli B088] gi|306905760|gb|EFN36286.1| glutamate racemase [Escherichia coli W] gi|315063302|gb|ADT77629.1| glutamate racemase [Escherichia coli W] gi|323380635|gb|ADX52903.1| glutamate racemase [Escherichia coli KO11] gi|331062080|gb|EGI34003.1| glutamate racemase [Escherichia coli TA271] Length = 285 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277 >gi|228957263|ref|ZP_04119029.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802454|gb|EEM49305.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 265 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 104/254 (40%), Gaps = 7/254 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA EL+ S+ +G + P + A T+ I ++ T T++ Sbjct: 60 KALVVACNTAAATALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 +H + +H + LA+ VE I + ++++ + + D ++ Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENRLEDI----AYVTQQVKQALLPLTKEDIDTLI 174 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSV 234 Query: 257 DIAMRRLMQGFGLK 270 + G + Sbjct: 235 LSFEHIAERWLGYQ 248 >gi|28275188|ref|NP_715848.2| glutamate racemase [Shewanella oneidensis MR-1] Length = 302 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 79/269 (29%), Positives = 128/269 (47%), Gaps = 11/269 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E L IL+FDSGIGGL VL ++R +P + + YV D+ PYG E+ L + L Sbjct: 27 ETGLSQPILVFDSGIGGLSVLAEIRKRLPHHDYCYVFDNARLPYGELEEQELVSGCVALI 86 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S ++++ + V+ACNTA T++ LR+ + +G VPAIK AA ++S I +L+T Sbjct: 87 SQLVERTHACIVVVACNTASTVVLPALRAKL-HIPVVGVVPAIKPAALLSKSKRIGLLAT 145 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 P T++R YT LI + CH+ L L E ++ + + Sbjct: 146 PGTVKRHYTHELISQFADDCHVELFGCSELVMMAEHKIATGQLGIARLTQI----LSPVV 201 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFD 246 DV+VL CTH+P++ +Q+ V LD+ +IA+R LL +H + Sbjct: 202 DANLDVLVLGCTHFPMLRDELQQVLGLGVTLLDSGAAIAKRVDTLLAHGKNISHNSEYER 261 Query: 247 D----HALFLSGKPDIAMRRLMQGFGLKS 271 + A + + + + G + Sbjct: 262 NGSLMRAFYTKAEITEGLATTLADCGFST 290 >gi|29839535|sp|Q8EK90|MURI_SHEON RecName: Full=Glutamate racemase gi|24345608|gb|AAN53293.1|AE015470_6 glutamate racemase [Shewanella oneidensis MR-1] Length = 273 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 11/266 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R +P + + YV D+ PYG E+ L + L S + Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKRLPHHDYCYVFDNARLPYGELEEQELVSGCVALISQL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ + V+ACNTA T++ LR+ + +G VPAIK AA ++S I +L+TP T Sbjct: 61 VERTHACIVVVACNTASTVVLPALRAKL-HIPVVGVVPAIKPAALLSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + CH+ L L E ++ + + Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEHKIATGQLGIARLTQI----LSPVVDAN 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD-- 247 DV+VL CTH+P++ +Q+ V LD+ +IA+R LL +H + + Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGLGVTLLDSGAAIAKRVDTLLAHGKNISHNSEYERNGS 235 Query: 248 --HALFLSGKPDIAMRRLMQGFGLKS 271 A + + + + G + Sbjct: 236 LMRAFYTKAEITEGLATTLADCGFST 261 >gi|332982127|ref|YP_004463568.1| glutamate racemase [Mahella australiensis 50-1 BON] gi|332699805|gb|AEE96746.1| glutamate racemase [Mahella australiensis 50-1 BON] Length = 268 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 97/262 (37%), Gaps = 16/262 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSG+GGL V++++ +P +Y D PYG + K Sbjct: 1 MDNRP--------IGVFDSGVGGLTVVKEIMKQLPAEDIVYFGDTARVPYGTRSRDTVIK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSG 121 + ++ + V+ACNTA + + + F + LG + A T++ Sbjct: 53 FTLQSVRFLMSQG-IKAVVLACNTASAISLEVAQQQF-DVPILGVIEGGAIAAVHATKNK 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I ++ T T+ I + VEE +I ++ Sbjct: 111 RIGVIGTEGTINSGAYERAIKLLDDSIETFAKPCPLFVPLVEEGLQDSEIAYMAARE--- 167 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTH 240 E D +++ CTHYPL+ + R+ V ++ ++ A + LL + Sbjct: 168 -YLSFFEDTGIDTLLMGCTHYPLMANTIRRAVGTGVKLINPAEKTALILKRTLLQMDILN 226 Query: 241 QTRVFDDHALFLSGKPDIAMRR 262 + F S + + Sbjct: 227 DGAKHPRYRYFASDDGERFKKI 248 >gi|238921669|ref|YP_002935184.1| glutamate racemase [Edwardsiella ictaluri 93-146] gi|238871238|gb|ACR70949.1| glutamate racemase, putative [Edwardsiella ictaluri 93-146] Length = 260 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 135/256 (52%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG E + +R++ + + + ++ Sbjct: 2 LVFDSGVGGLSVYQEIRALLPDLHYIYAFDNQGFPYGEKEAVFITERVLRIVASLHQRHT 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA T++ LR+ FP +G VPAIK AA T++G++ +L+T AT++R Y Sbjct: 62 LSAMVVACNTASTIVLPALRARFP-FPVVGVVPAIKPAAKLTRNGIVGLLATRATVQRAY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + + C I ++ S L E G + ++ + E D +V Sbjct: 121 THELIARFATDCQIKMLGSAELVELAEAKLHGEALDLQRLRTILRPWLTMAEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SGK 255 L CTH+PL+ Q+ P +D+ +IARR L+ T + + A Sbjct: 179 LGCTHFPLLRDELAQVLPAGTRLVDSGAAIARRVAWLIANQATLPGKDMRNVAYATQCDA 238 Query: 256 PDIAMRRLMQGFGLKS 271 A+ +++ G ++ Sbjct: 239 QTAALLPVLRQLGFET 254 >gi|325128817|gb|EGC51677.1| glutamate racemase [Neisseria meningitidis N1568] Length = 255 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 8/246 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240 Query: 251 FLSGKP 256 ++S P Sbjct: 241 YVSDIP 246 >gi|145297189|ref|YP_001140030.1| glutamate racemase [Aeromonas salmonicida subsp. salmonicida A449] gi|142849961|gb|ABO88282.1| glutamate racemase [Aeromonas salmonicida subsp. salmonicida A449] Length = 263 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 137/261 (52%), Gaps = 8/261 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL + +++R +P +++ Y D+ FPYG + AL L S ++ Sbjct: 2 ANILVFDSGMGGLTIYREIRRALPAHNYFYCFDNANFPYGELSESALIAACTRLVSHMVA 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ L VIACNTA T+ LR+ ++ +G VPAIK AAA T++G I +L+TP T+ Sbjct: 62 EHVIDLVVIACNTASTIALPSLRAAL-TIPVVGVVPAIKPAAALTRNGCIGLLATPGTVS 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT +LI + + L + L E G + +++ + + +R D Sbjct: 121 REYTHHLIAQFAPGKRVLLKGATELVIEAEHKLAGRPVNMALLQEVLTDWM--EGEERPD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTH+PL+ RQL P +D+ ++ARR LL + ++ + + Sbjct: 179 TLVLGCTHFPLLNDEIRQLMP-GCQLVDSGSAVARRVAHLLATVAEQPSQAVVQARAYCT 237 Query: 254 GKPDIAMRRL---MQGFGLKS 271 + D ++L +Q +GL S Sbjct: 238 -RLDAQAQKLTAPLQAWGLSS 257 >gi|254671042|emb|CBA07884.1| Glutamate racemase [Neisseria meningitidis alpha153] gi|325132881|gb|EGC55559.1| glutamate racemase [Neisseria meningitidis M6190] Length = 327 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 123 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 124 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 183 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 238 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 239 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 298 YVSDIPLKFRTIGERFLG 315 >gi|220906704|ref|YP_002482015.1| glutamate racemase [Cyanothece sp. PCC 7425] gi|219863315|gb|ACL43654.1| glutamate racemase [Cyanothece sp. PCC 7425] Length = 295 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 12/268 (4%) Query: 6 YPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 P + L Q SI +FDSG+GGL VL+ ++ +P+ F+Y AD PYGN + Sbjct: 14 RPANQSLSQQASIGVFDSGVGGLTVLRVLQQHLPQESFLYFADTAHLPYGNRCQAEIVTF 73 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122 + + + ++ + ++ACNT+ L D +R+ F ++ LG + P + A + Sbjct: 74 ARQILTWMTEQG-VKMVIVACNTSSALALDIVRTEF-NLPILGLILPGARTAVQ--RGKR 129 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I I++T AT+ I Q + +S +E+ +I + + Sbjct: 130 IGIIATAATVASECYPQAILEANPQLQVWQMSCPEFVPLIEQN----RINDPYTLEVART 185 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQ 241 R D ++ CTHYP + V R++ P V +D + S+ A L + Q Sbjct: 186 YLQPLIESRIDTLIYGCTHYPHLESVIRKVLPRSVQRIDPARSVVTAAARELELLGLRKQ 245 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGL 269 +R F SG P+ R Q G Sbjct: 246 SRQTSSTRFFASGCPEQFARVSSQWLGY 273 >gi|229143571|ref|ZP_04271996.1| Glutamate racemase [Bacillus cereus BDRD-ST24] gi|296501581|ref|YP_003663281.1| glutamate racemase [Bacillus thuringiensis BMB171] gi|228639927|gb|EEK96332.1| Glutamate racemase [Bacillus cereus BDRD-ST24] gi|296322633|gb|ADH05561.1| glutamate racemase [Bacillus thuringiensis BMB171] Length = 276 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA EL+ S+ +G + P + A T+ I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE I + ++++ + + Sbjct: 125 IKSNMYEKALHELDTYLEVHSHACPNLATVVENRLEDI----AYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVLSFEHIAERWLGYQ 259 >gi|159036256|ref|YP_001535509.1| glutamate racemase [Salinispora arenicola CNS-205] gi|157915091|gb|ABV96518.1| glutamate racemase [Salinispora arenicola CNS-205] Length = 293 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 102/261 (39%), Gaps = 12/261 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P +Y+ D PYG +++ + ++ Sbjct: 3 DAPIGIFDSGVGGLTVARALTDQLPGEDLVYLGDTAHVPYGPKPIADVRRHALACLDQLM 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D L VIACN+A + R + PA+++A A T++G + ++ T AT+ Sbjct: 63 DAGA-KLLVIACNSAAAACLHDARERYSVPVVEVIRPAVRRAVAATRNGRVGVIGTSATI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + V+ VE + + Sbjct: 122 TSGAYEDAFAA-APHITVTGVACPEFVEFVERGITSG----SALHSIAQRYLTPLRASGI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-----PRINTHQTRVFDD 247 D +VL CTHYPL+ + + V + ++D A++ LL PR ++R Sbjct: 177 DTLVLGCTHYPLLAGLLNLVMGNGVTLVSSADEAAKKVYRLLTEGVVPRRADDESRPA-R 235 Query: 248 HALFLSGKPDIAMRRLMQGFG 268 H +G P R + G Sbjct: 236 HRFIATGDPAPFERLTSRFLG 256 >gi|304386743|ref|ZP_07369012.1| glutamate racemase [Neisseria meningitidis ATCC 13091] gi|304339178|gb|EFM05263.1| glutamate racemase [Neisseria meningitidis ATCC 13091] Length = 327 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 123 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 124 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 183 VNSNAYARAIHRSNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 238 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 239 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 298 YVSDIPLKFRTIGERFLG 315 >gi|293371702|ref|ZP_06618113.1| glutamate racemase [Bacteroides ovatus SD CMC 3f] gi|299147392|ref|ZP_07040457.1| glutamate racemase [Bacteroides sp. 3_1_23] gi|292633399|gb|EFF51969.1| glutamate racemase [Bacteroides ovatus SD CMC 3f] gi|298514670|gb|EFI38554.1| glutamate racemase [Bacteroides sp. 3_1_23] Length = 280 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P+ LG + P ++ +++ I +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECVGEISKNQHIGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + + + + S VE + + I+K I+ Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D ++L CTH+P+++ RQ P + + + +A + L R + Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + Sbjct: 247 GNCQFYTTEAEEKFSE 262 >gi|325130825|gb|EGC53559.1| glutamate racemase [Neisseria meningitidis OX99.30304] Length = 270 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIEHFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 241 YVSDIPLKFRTIGERFLG 258 >gi|121635399|ref|YP_975644.1| glutamate racemase [Neisseria meningitidis FAM18] gi|20177991|sp|Q9RMM3|MURI_NEIMC RecName: Full=Glutamate racemase gi|166231045|sp|A1KVG8|MURI_NEIMF RecName: Full=Glutamate racemase gi|6449085|gb|AAF08814.1|AF194079_1 MurI [Neisseria meningitidis] gi|120867105|emb|CAM10872.1| glutamate racemase [Neisseria meningitidis FAM18] gi|261391971|emb|CAX49435.1| glutamate racemase [Neisseria meningitidis 8013] gi|325142940|gb|EGC65299.1| glutamate racemase [Neisseria meningitidis 961-5945] gi|325205523|gb|ADZ00976.1| glutamate racemase [Neisseria meningitidis M04-240196] Length = 270 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 241 YVSDIPLKFRTIGERFLG 258 >gi|284924068|emb|CBG37167.1| glutamate racemase [Escherichia coli 042] Length = 285 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G K+ Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFKT 277 >gi|113474067|ref|YP_720128.1| glutamate racemase [Trichodesmium erythraeum IMS101] gi|122965316|sp|Q11A19|MURI_TRIEI RecName: Full=Glutamate racemase gi|110165115|gb|ABG49655.1| glutamate racemase [Trichodesmium erythraeum IMS101] Length = 270 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 9/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I IFDSGIGGL VL+++ +P+ +Y AD PYG + + + + + ++ Sbjct: 7 QKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDEIITWLV 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPAT 131 + ++ACNT+ L ++++S F + LG VP A Q I +++TPAT Sbjct: 67 KSG-VKMVLMACNTSSALALEKVKSKF-DVPILGLIVPGANTAVK--QGKRIGVIATPAT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 I + + V +E+ ++ + + E + ++ Sbjct: 123 AASNAYRYAILEANASVQVWQVGCPYFVPLIEQN----QLHDPYTYQIAEEYLMPLIQQQ 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +V CTHYP + + R L P V ++D + S+ + L +N + Sbjct: 179 IDTLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFV 238 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +S P +Q G K Sbjct: 239 VSSSPQKFADLSLQLLGYK 257 >gi|148655659|ref|YP_001275864.1| glutamate racemase [Roseiflexus sp. RS-1] gi|189030367|sp|A5UTG1|MURI_ROSS1 RecName: Full=Glutamate racemase gi|148567769|gb|ABQ89914.1| glutamate racemase [Roseiflexus sp. RS-1] Length = 272 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 7/252 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSGIGG+ VL+++R L+P + +Y+AD PYG+ L+ + ++ Sbjct: 7 RPIGLFDSGIGGMTVLREVRRLLPGENLLYLADQARCPYGSRSPDELRAIAAACAAWLIA 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L V+ACNTA +LR FP++ F+G VP +K AA+ T+SG++ +L+TPATL Sbjct: 67 RGA-KLVVVACNTASAAALADLRRRFPAIPFVGMVPPVKPAASRTRSGVVGVLATPATLA 125 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 ++I + H+ + L ++EE A + E + G D Sbjct: 126 GDLLHDVISRWAEGVHVIEQACPGLVEQIEEGA----LDSPETMALLRGYVTPLLDAGAD 181 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHALF 251 IVL CTHYPL+V R ++ LD + ++A+R ++ + + Sbjct: 182 TIVLGCTHYPLLVPQLRAIAGDDTLILDAAPAVAQRVAQIVQERGLMRNVNTLSGAITCA 241 Query: 252 LSGKPDIAMRRL 263 +G P+ + Sbjct: 242 TTGDPERFANLI 253 >gi|325134824|gb|EGC57460.1| glutamate racemase [Neisseria meningitidis M13399] Length = 270 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT ++ ++R +M L + A K A + T++ I I++T T Sbjct: 67 E-HDVKAMVIACNTIAAVVGQKIRQKTGNMPVLDVISAGAKAALSTTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 241 YVSDIPLKFRTIGERFLG 258 >gi|225076304|ref|ZP_03719503.1| hypothetical protein NEIFLAOT_01345 [Neisseria flavescens NRL30031/H210] gi|224952428|gb|EEG33637.1| hypothetical protein NEIFLAOT_01345 [Neisseria flavescens NRL30031/H210] Length = 269 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 8/263 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + Sbjct: 1 MSTSKQRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126 +L+ VIACNT + +R +M L + A + A T++ I I+ Sbjct: 61 VDFLLE-NDVKALVIACNTIAAVAGQRIRQKAGNMPVLDVISAGAEAALQTTKNNRIGII 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ + IHS + + ++ +L VEE ++ +++ ++ + Sbjct: 120 ATNTTVNSNAYARAIHSKNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLAD 179 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-F 245 D +VL CTH+PL+ + + + V +D++ + A L + T Sbjct: 180 ----DIDTLVLGCTHFPLLKPLIGREA-QNVTLVDSAITTAEATAKALAQAGLLNTENDN 234 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 D+ ++S P + G Sbjct: 235 PDYRFYVSDIPLRFRTIGERFLG 257 >gi|254360933|ref|ZP_04977079.1| glutamate racemase [Mannheimia haemolytica PHL213] gi|261492190|ref|ZP_05988760.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494308|ref|ZP_05990803.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153092412|gb|EDN73475.1| glutamate racemase [Mannheimia haemolytica PHL213] gi|261310038|gb|EEY11246.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312170|gb|EEY13303.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 263 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 134/260 (51%), Gaps = 5/260 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + ++R ++P H++Y D+ FPY + L +R + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDEIRKVLPHAHYLYCFDNAFFPYSEKSEAVLIERAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +K + V+ACNTA T++ LR F + +G VPAIK AAA +++ +I +L+T T Sbjct: 61 AEKQPLDMVVVACNTASTVVLPALREHF-NFPIVGTVPAIKPAAAISETKVIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y LI Y C + + + L VEE K+ + ++K +E + Sbjct: 120 VARPYVDELIRKYAQDCTVEKIGTTDLVEIVEEKQRSGKVDMNRLQKVVEAW---QGKPE 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+PL+ +QL P ++D IA+R LL Q F++ A Sbjct: 177 LDTVILGCTHFPLVKAELQQLLPDVKYFVDPGVGIAKRVLSLLEERKFQQKADFENQAFC 236 Query: 252 LSGKPDIAMRR-LMQGFGLK 270 +++ +MQ +G Sbjct: 237 TKQSSAFNIKQDVMQNWGFN 256 >gi|160885540|ref|ZP_02066543.1| hypothetical protein BACOVA_03540 [Bacteroides ovatus ATCC 8483] gi|156109162|gb|EDO10907.1| hypothetical protein BACOVA_03540 [Bacteroides ovatus ATCC 8483] Length = 280 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P+ LG + P ++ +++ I +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECIGEISKNQHIGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + + + + S VE + + I+K I+ Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D ++L CTH+P+++ RQ P + + + +A + L R + Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + Sbjct: 247 GNCQFYTTEAEEKFSE 262 >gi|331675461|ref|ZP_08376211.1| glutamate racemase [Escherichia coli TA280] gi|331067521|gb|EGI38926.1| glutamate racemase [Escherichia coli TA280] Length = 289 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281 >gi|331655667|ref|ZP_08356659.1| glutamate racemase [Escherichia coli M718] gi|12518894|gb|AAG59171.1|AE005628_7 glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan [Escherichia coli O157:H7 str. EDL933] gi|13364374|dbj|BAB38321.1| glutamate racemase [Escherichia coli O157:H7 str. Sakai] gi|73857946|gb|AAZ90653.1| glutamate racemase [Shigella sonnei Ss046] gi|81242998|gb|ABB63708.1| glutamate racemase [Shigella dysenteriae Sd197] gi|81247728|gb|ABB68436.1| glutamate racemase [Shigella boydii Sb227] gi|209751918|gb|ACI74266.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli] gi|209751920|gb|ACI74267.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli] gi|209751922|gb|ACI74268.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli] gi|209751924|gb|ACI74269.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli] gi|209751926|gb|ACI74270.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli] gi|331046768|gb|EGI18853.1| glutamate racemase [Escherichia coli M718] Length = 289 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281 >gi|218707594|ref|YP_002415113.1| glutamate racemase [Escherichia coli UMN026] gi|218434691|emb|CAR15624.2| glutamate racemase [Escherichia coli UMN026] Length = 289 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281 >gi|261380865|ref|ZP_05985438.1| glutamate racemase [Neisseria subflava NJ9703] gi|319638648|ref|ZP_07993408.1| glutamate racemase [Neisseria mucosa C102] gi|284796337|gb|EFC51684.1| glutamate racemase [Neisseria subflava NJ9703] gi|317400032|gb|EFV80693.1| glutamate racemase [Neisseria mucosa C102] Length = 269 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 8/263 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + Sbjct: 1 MSTSKQRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126 +L+ VIACNT + ++R +M L + A + A T++ I I+ Sbjct: 61 VDFLLE-NDVKALVIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALQTTKNNRIGII 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ + IHS + + ++ +L VEE ++ +++ ++ + Sbjct: 120 ATNTTVNSNAYARAIHSQNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLAD 179 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-F 245 D +VL CTH+PL+ + + + V +D++ + A L + T Sbjct: 180 ----DIDTLVLGCTHFPLLKPLIGREA-QNVTLVDSAITTAEATAKALAQAGLLNTENDN 234 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 D+ ++S P + G Sbjct: 235 PDYRFYVSDIPLRFRTIGERFLG 257 >gi|256425483|ref|YP_003126136.1| glutamate racemase [Chitinophaga pinensis DSM 2588] gi|256040391|gb|ACU63935.1| glutamate racemase [Chitinophaga pinensis DSM 2588] Length = 272 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 11/258 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FDSG GGL VL+++ +P+Y +IY D+ PYGN + + + Sbjct: 1 MTGPIGVFDSGYGGLTVLKEIVATLPQYDYIYFGDNARAPYGNRGFDTIHTYTLQCVQHL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLISI 125 D P L ++ACNTA ++ P LG + P + TQSG + I Sbjct: 61 FDMGCP-LVILACNTASARALRTIQQKDLPRIAPDRRVLGVIRPTTEMVGTLTQSGEVGI 119 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+T T+ I+ + +H ++ + +E + + +KK ++ Sbjct: 120 LATKGTVASESYPIEINKFFPHVKVHQLACPMWVPIIENGEADSEGADYFVKKYLDQILT 179 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 + D +VLACTHYP++ RQ P + L +A + L R + R+ Sbjct: 180 --DAPDIDTLVLACTHYPILTKKIRQFLPGGITLLSQGKIVAHGLKDYLHRHPEMEVRLS 237 Query: 246 DD--HALFLSGKPDIAMR 261 + F + P I + Sbjct: 238 KNGGRKYFTTDDPVIFEK 255 >gi|314930288|gb|EFS94119.1| glutamate racemase [Propionibacterium acnes HL067PA1] Length = 284 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA +A+A T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAACRASAATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VEE E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ + + Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 237 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|308388659|gb|ADO30979.1| glutamate racemase [Neisseria meningitidis alpha710] Length = 270 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 8/246 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240 Query: 251 FLSGKP 256 ++S P Sbjct: 241 YVSDIP 246 >gi|193214141|ref|YP_001995340.1| glutamate racemase [Chloroherpeton thalassium ATCC 35110] gi|193087618|gb|ACF12893.1| glutamate racemase [Chloroherpeton thalassium ATCC 35110] Length = 278 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 7/262 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I IFDSGIGGL V++K+R +P IY D PYG +++ + Sbjct: 13 KAERPIGIFDSGIGGLTVVRKIRERLPNERLIYFGDTARVPYGTKSQVTVRRYAAE-DTR 71 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129 +L KYQP + V+ACNT L D + + LG + A A Y+Q+ I ++ T Sbjct: 72 LLLKYQPKMIVVACNTVSALALDVVEHESGGLPVLGVLKAGANLAVKYSQTKHIGVIGTI 131 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ I + ++ + + EE I K E Sbjct: 132 ATISSNAYPLEISKLDCEAEVYSKACPLFVPLAEEGF----ISHQATKLIATEYLTELLV 187 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248 K+ D +VL CTHYP++ + +++ V +D+++++A LL + + Sbjct: 188 KKIDSLVLGCTHYPILKSMLAEVTGKNVVIIDSAEAVAMEVENLLREKSLLNREINQALP 247 Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270 + +S P GL Sbjct: 248 KVLVSDLPQKFKTMFELFLGLS 269 >gi|116617725|ref|YP_818096.1| glutamate racemase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096572|gb|ABJ61723.1| glutamate racemase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 291 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSGIGGL V+++ + +P IY+ D PYG + + + ++ Sbjct: 17 NNPIGLVDSGIGGLTVVKESQKQLPNEQLIYIGDTARMPYGPRSEKEVIDYTFQMAHYLV 76 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA +LR + +G + P + A + +Q+ I +++T T Sbjct: 77 NEQNIKMLVIACNTATARALSQLREQL-CIPVIGVIQPGAEAAVSISQNKKIGLIATQGT 135 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + + I + + VE + DE ++ I + Sbjct: 136 VESQVYNEKMLAIDNNVQITSQAEPEFVTLVENNL----YQSDEAREVIAHHLSAFKEAN 191 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHA 249 D ++L CTH+PL+ ++ V +D+ + L ++ H D Sbjct: 192 IDTLILGCTHFPLLTPFIQEAVGSDVTLVDSGAKTVAVMKQYLDELDIHSEVKHNHSDDI 251 Query: 250 LFLSGKPDIAMRRLMQGF 267 +G Sbjct: 252 YNTTGDKLKFKTIASSWL 269 >gi|260172140|ref|ZP_05758552.1| glutamate racemase [Bacteroides sp. D2] gi|315920449|ref|ZP_07916689.1| glutamate racemase [Bacteroides sp. D2] gi|313694324|gb|EFS31159.1| glutamate racemase [Bacteroides sp. D2] Length = 280 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P+ LG + P ++ +++ I +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECVEEISKNQHIGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + + + + S VE + + I+K I+ Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D ++L CTH+P+++ RQ P + + + +A + L R + Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + Sbjct: 247 GNCQFYTTEAEEKFSE 262 >gi|300932724|ref|ZP_07147980.1| glutamate racemase [Corynebacterium resistens DSM 45100] Length = 270 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 9/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + L+P + +Y+ D PYG+ +++ + + +++ Sbjct: 4 NAPIGIFDSGVGGLTVARAVVDLLPRENIVYIGDTANSPYGDKPLAQVRQLSIAIADELV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + V+ACN+A + + R +P +PA+++A A T++G + ++ T AT+ Sbjct: 64 ERG-CKMIVVACNSASSAFIRDARERYPVPVIEVILPAVRRAVAATRNGKVGVIGTHATV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +L + + + VE +I E + Sbjct: 123 TSGSYQDLFAA-SPNVEVTAQACPQFVPFVERGIT----TGRQIVGLAENYLEPLKDAGV 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYPL+ V + + V ++++D A+ L + D + Sbjct: 178 DTVVLGCTHYPLLAGVVQLVMGDDVTLVNSADETAKMTYRALSEADMLADEDPDREVKLV 237 Query: 253 ---SGKPDIAMRRLMQGFG 268 +G P + G Sbjct: 238 FESTGDPQRFAHLAQRFLG 256 >gi|217975220|ref|YP_002359971.1| glutamate racemase [Shewanella baltica OS223] gi|254766123|sp|B8EBM4|MURI_SHEB2 RecName: Full=Glutamate racemase gi|217500355|gb|ACK48548.1| glutamate racemase [Shewanella baltica OS223] Length = 274 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 11/256 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+ Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT +LI + CH+ L L E+ ++ + + Sbjct: 120 VKRHYTHSLISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N + Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNFIVEQRR------ 229 Query: 252 LSGKPDIAMRRLMQGF 267 ++ + + MQ F Sbjct: 230 VTNEREAVGESAMQAF 245 >gi|269140807|ref|YP_003297508.1| glutamate racemase [Edwardsiella tarda EIB202] gi|267986468|gb|ACY86297.1| glutamate racemase [Edwardsiella tarda EIB202] gi|304560567|gb|ADM43231.1| Glutamate racemase [Edwardsiella tarda FL6-60] Length = 260 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 134/256 (52%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG E + R++ + + + ++ Sbjct: 2 LVFDSGVGGLSVYQEIRALLPDLHYIYAFDNQGFPYGEKEAAFITDRVLRIVASLHQRHT 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA T++ LR+ FP +G VPAIK AA T++G++ +L+T AT++R Y Sbjct: 62 LSAMVVACNTASTIVLPALRARFP-FPVVGVVPAIKPAAKLTRNGVVGLLATRATVQRAY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + + C I ++ S L E G + ++ + E D +V Sbjct: 121 THELIARFATDCQIKMLGSAELVELAEAKLHGEALDLQRLRTILRPWLTMAEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SGK 255 L CTH+PL+ Q+ P +D+ +IARR L+ T + + A Sbjct: 179 LGCTHFPLLRDELAQVLPAGTRLVDSGAAIARRVAWLIANQVTLPGKDMRNVAYATQCDA 238 Query: 256 PDIAMRRLMQGFGLKS 271 A+ +++ G ++ Sbjct: 239 QTAALLPVLRQMGFET 254 >gi|296448272|ref|ZP_06890166.1| glutamate racemase [Methylosinus trichosporium OB3b] gi|296254224|gb|EFH01357.1| glutamate racemase [Methylosinus trichosporium OB3b] Length = 280 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 113/273 (41%), Positives = 161/273 (58%), Gaps = 5/273 (1%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + + P IL+FDSG+GGL V ++ L P +Y ADD GFPYG + AL Sbjct: 1 MSSAPTISSAPK-ILVFDSGLGGLTVFVEVAKLRPHATLLYCADDAGFPYGPLSEEALVA 59 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R+M + ++ + P L VIACNTA T + LR+ +P++ F+G VPA+K AA ++S L Sbjct: 60 RVMLVMESLVAAHAPDLVVIACNTASTRVLPHLRARWPNLPFVGTVPAVKPAAERSRSRL 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 IS+L+TP T+ R YT LI S+ C LV S LA E++ G + E EI EI Sbjct: 120 ISVLATPGTVTRDYTRALIASFAEGCEATLVGSSRLAPIAEDFLRGAAVSEAEIAAEIAP 179 Query: 183 CFIE-KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTH 240 CF++ +G RTDV+VLACTHYPL++ FR+L+PWPV+W+D + +IAR+A R LL R Sbjct: 180 CFVQRPDGARTDVVVLACTHYPLLLDFFRRLAPWPVEWIDPAPAIARQADRLLLQRFGAD 239 Query: 241 Q-TRVFDDHALFLSG-KPDIAMRRLMQGFGLKS 271 + A+F SG +P + + G + Sbjct: 240 RIGFREPPRAIFTSGARPVPPLAAALSRLGFAA 272 >gi|51891480|ref|YP_074171.1| glutamate racemase [Symbiobacterium thermophilum IAM 14863] gi|81610699|sp|Q67SL6|MURI_SYMTH RecName: Full=Glutamate racemase gi|51855169|dbj|BAD39327.1| glutamate racemase [Symbiobacterium thermophilum IAM 14863] Length = 277 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 7/260 (2%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 Q I +FDSG GGL V + + L+P+ + IY D FPYG ++ Sbjct: 6 PDTQRPIGLFDSGEGGLTVARAVADLLPQENLIYACDTAHFPYGPRPLAEVRAFFRRFME 65 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128 +++ L ++ACNTA D L + + LG V P AA + +G I + +T Sbjct: 66 FFVEQ-NCKLVIVACNTATAAAIDLLLADAFPIPALGVVQPGAAMAAEASVTGRIGVAAT 124 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T I + ++ + IL R EE I E+++E+E C Sbjct: 125 QGTCDSGIYPQTIRLFRPDAYVVQQACPILVIRAEEGV----ISGPEVRREVERCLAPIL 180 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD- 247 +R D +VL CTH+P + V + + V +D + A + LL R Sbjct: 181 AERVDTLVLGCTHFPHMAKVIQDVVGPAVRLVDPGKATAVQVADLLRRRGLLNPGPGPGQ 240 Query: 248 HALFLSGKPDIAMRRLMQGF 267 F +G P + + + Sbjct: 241 RRAFTTGDPQRFLEVACRLW 260 >gi|330444840|ref|ZP_08308495.1| glutamate racemase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489150|dbj|GAA02992.1| glutamate racemase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 269 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 81/222 (36%), Positives = 126/222 (56%), Gaps = 6/222 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D L +R ++ S +++ Sbjct: 5 KKIVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELPDDVLIERTNYIVSTLVE 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +YQ L VIACNTA T++ LR ++ +G VPAIK AA +Q+ +I +L+TPAT++ Sbjct: 65 QYQADLVVIACNTASTIVLPTLRKHL-TVPVVGVVPAIKPAAKLSQTKVIGLLATPATVK 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R+YT LI + S C + ++ S L E+ G I DE+ + ++ D Sbjct: 124 RSYTQQLISQFASDCEVKMIGSTRLVEMAEQKLRGEAISLDELSDILAPW-----QQQVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 I+L CTH+PLI + + V +D+ +IA R LL Sbjct: 179 SIILGCTHFPLIKDEIQAVLNNDVYIVDSGKAIANRVASLLE 220 >gi|325208730|gb|ADZ04182.1| glutamate racemase [Neisseria meningitidis NZ-05/33] Length = 270 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDDNNPDYRF 240 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 241 YVSDIPLKFRTIGERFLG 258 >gi|271963270|ref|YP_003337466.1| glutamate racemase [Streptosporangium roseum DSM 43021] gi|270506445|gb|ACZ84723.1| Glutamate racemase [Streptosporangium roseum DSM 43021] Length = 276 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 6/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q SI IFDSG+GGL V + + +P YVAD PYG ++ + + ++ Sbjct: 6 QASIGIFDSGVGGLTVARAIIDQLPNESIFYVADTARQPYGPKSIAQVRAYALEVMDHLV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + + VIACN+A + + R + PA ++A T++G + ++ T AT+ Sbjct: 66 E-HDVKMLVIACNSASAAVLRDARERYDVPVVEVIQPAARRAVQATRNGRVGVIGTRATI 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + V++ L VE +E+ + I G Sbjct: 125 ESMAYHDAFAA-APDVMLTGVAAPRLVEFVERGET----MSEELIEVIRGYMGPVLRDGC 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ ++ V + ++D A+ +L H Sbjct: 180 DTLILGCTHYPLLTAPISYVAGDGVTLVSSADETAKDVYRILHDRGLAAAGGTPRHRFGA 239 Query: 253 SGKPDIAMRRLMQGFG 268 +G + + + G Sbjct: 240 TGDTVLFEQLGRRFLG 255 >gi|323339853|ref|ZP_08080122.1| glutamate racemase [Lactobacillus ruminis ATCC 25644] gi|323092726|gb|EFZ35329.1| glutamate racemase [Lactobacillus ruminis ATCC 25644] Length = 259 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 6/258 (2%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++ + I IFDSG+GGL VL++ +M +I+ D PYG + + + Sbjct: 4 EETKRPIGIFDSGMGGLTVLRECVKIMGNEDYIFYGDSFNAPYGVKSTEQVYRLSKKIVQ 63 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L K VIACNTA + LR +P + +G PA+K A + ++ + +++TP Sbjct: 64 RFL-KQNVKAIVIACNTATSASASRLRKEYPELPIIGLEPALKPAVLHKKNSTVLVMATP 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TL+ NL++ + Q I + + L VE +I E+KK + G Sbjct: 123 LTLKEKKFENLMNRFEDQAKIIKLPAPDLVEFVERG----EIDTPELKKYLRSILNPYLG 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D +VL CTH+P +Q+ V +D AR R LL N + Sbjct: 179 -NIDAVVLGCTHFPFAKRAIQQIVGNDVYVVDGGAGAARELRRLLEAKNERRKENRIGKI 237 Query: 250 LFLSGKPDIAMRRLMQGF 267 FL+ PD L + Sbjct: 238 EFLNSNPDPQEIELSKKL 255 >gi|283834735|ref|ZP_06354476.1| hypothetical protein CIT292_08958 [Citrobacter youngae ATCC 29220] gi|291069665|gb|EFE07774.1| hypothetical protein CIT292_08958 [Citrobacter youngae ATCC 29220] Length = 260 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 142/256 (55%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R+Y Sbjct: 62 LALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S L E G + +E+++ + + + D +V Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGETVSLEELRRILRPWL--RMSEPPDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL T ++ A ++ Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDATSTDENVAFCMAMTT 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G K+ Sbjct: 239 EAEQLLPVLQRYGFKT 254 >gi|256002758|gb|ACU52624.1| glutamate racemase [Bacillus licheniformis] Length = 250 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 7/238 (2%) Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92 +P+ + IYV D PYG + + + L + +L+ + + VIACNTA + Sbjct: 1 MRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIAL 60 Query: 93 DELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151 D+++ + + +G + P + A T + I ++ T T++ + + + Sbjct: 61 DDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVE 119 Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 ++ +L VE K ++ +K + D ++L CTHYP++ ++ Sbjct: 120 NLACPLLVPFVESGKFLDKTADEIVK----TSLYPLKDTSIDSLILGCTHYPILKEAIQR 175 Query: 212 LSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 V+ + + D AR +L +Q+ + DH +G D + FG Sbjct: 176 YMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQFLTTGARDQFAKIADDWFG 233 >gi|317164818|gb|ADV08359.1| glutamate racemase [Neisseria gonorrhoeae TCDC-NG08107] Length = 349 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 86 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 145 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 146 -GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 204 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 205 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 260 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 261 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 319 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 320 YVSDIPLKFRTIGERFLG 337 >gi|293413408|ref|ZP_06656069.1| glutamate racemase [Escherichia coli B354] gi|291468156|gb|EFF10654.1| glutamate racemase [Escherichia coli B354] Length = 289 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEGVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281 >gi|127511073|ref|YP_001092270.1| glutamate racemase [Shewanella loihica PV-4] gi|166231053|sp|A3Q963|MURI_SHELP RecName: Full=Glutamate racemase gi|126636368|gb|ABO22011.1| glutamate racemase [Shewanella loihica PV-4] Length = 266 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 7/260 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +IL+FDSG+GGL +L +R +P ++ Y+ D+ PYG ++ L + + L S Sbjct: 1 MSANILVFDSGVGGLSILAAVREQLPSANYCYLFDNARLPYGELDEQELIQGCVTLISQA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + Q + V+ACN+A TLI LR+ + +G VPAIK AAA +Q + +L+TP T Sbjct: 61 VIQCQADIVVVACNSASTLILPALRACLK-VPVVGVVPAIKPAAALSQKKHLGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT +LI + S C + S L E+ + + + + Sbjct: 120 VNRQYTQDLIDQFASDCRVDRFGSSELVYLAEDKMAQRPVDSEA----LHRILAPIKASG 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+P++ + V LD+S++IA R LL + + AL+ Sbjct: 176 LDTLILGCTHFPILREELQSYLGEGVHLLDSSNAIAARVVSLLE--PSMSGEIGKSQALY 233 Query: 252 LSGKPDIAMRRLMQGFGLKS 271 + +R+ + +G +S Sbjct: 234 TTDSICEGLRKTLAAWGFRS 253 >gi|227494818|ref|ZP_03925134.1| glutamate racemase [Actinomyces coleocanis DSM 15436] gi|226831270|gb|EEH63653.1| glutamate racemase [Actinomyces coleocanis DSM 15436] Length = 272 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 14/262 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P+ +YV D PYG +++ + + ++ Sbjct: 3 NAPIGIFDSGLGGLTVARSIMDKLPQEQILYVGDTAHTPYGTKPIATVRELALNVMDELA 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAV-PAIKQAAAYTQSGLISILST 128 + + VIACNTA + + R + + + + PA K A A T++ I +++T Sbjct: 63 SRG-VKMLVIACNTASAAVLRDARERYEVDAGIPVVEVIQPASKAAVAATRNRKIGVIAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + + V + + VE+ E+ + + Sbjct: 122 AATVTSGAYKDAF-AVVPDLEVTQQACPRFVEFVEKGIT----TGAELNEVAREYLDPVK 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-- 246 D +VL CTHYPL+ + Q V + +S+S A L R N + V Sbjct: 177 TAGVDTLVLGCTHYPLLTGLISQHMGERVTLISSSESAANEVYQRLVRENLTASEVDPLQ 236 Query: 247 -DHALFLSGKPDIAMRRLMQGF 267 H + +G + L + F Sbjct: 237 VQHEFYGTGSLESFA-PLARRF 257 >gi|254805513|ref|YP_003083734.1| glutamate racemase MurI [Neisseria meningitidis alpha14] gi|254669055|emb|CBA07540.1| glutamate racemase MurI [Neisseria meningitidis alpha14] Length = 327 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 123 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 124 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 183 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 238 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 239 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 298 YVSDIPLKFRTIGERFLG 315 >gi|165977281|ref|YP_001652874.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307251416|ref|ZP_07533331.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307262335|ref|ZP_07543983.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|226707583|sp|B0BT16|MURI_ACTPJ RecName: Full=Glutamate racemase gi|165877382|gb|ABY70430.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306856584|gb|EFM88725.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306867998|gb|EFM99826.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 265 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 134/261 (51%), Gaps = 6/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y + LI Y C + + + L VEE ++ ++ + + I + Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGQVDQERLIEVIAEW---QTHPT 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+PL+ +QL P ++D + IA R LL + ++ F Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIAF 236 Query: 252 LSGKPDIAMRR--LMQGFGLK 270 + + +R +MQ +G K Sbjct: 237 CTKIDEEFFKREVIMQQWGFK 257 >gi|227432402|ref|ZP_03914392.1| glutamate racemase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351841|gb|EEJ42077.1| glutamate racemase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 291 Score = 284 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSGIGGL V+++ + +P IY+ D PYG + + + ++ Sbjct: 17 NNPIGLVDSGIGGLTVVKESQKQLPNEQLIYIGDTARMPYGPRSEKEVIDYTFQMTHYLV 76 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA +LR + +G + P + A + +Q+ I +++T T Sbjct: 77 NEQNIKMLVIACNTATARALSQLREQL-CIPVIGVIQPGAEAAVSISQNKKIGLIATQGT 135 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + + I + + VE + DE ++ I + Sbjct: 136 VESQVYNEKMLAIDNNVQITSQAEPEFVTLVENNL----YQSDEAREVIAHHLSAFKEAN 191 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHA 249 D ++L CTH+PL+ ++ V +D+ + L ++ H D Sbjct: 192 IDTLILGCTHFPLLTPFIQEAVGSDVTLVDSGAKTVAVMKQYLDELDIHSEVKHNHSDDI 251 Query: 250 LFLSGKPDIAMRRLMQGF 267 +G Sbjct: 252 YNTTGDKLKFKTIASSWL 269 >gi|322834972|ref|YP_004214999.1| glutamate racemase [Rahnella sp. Y9602] gi|321170173|gb|ADW75872.1| glutamate racemase [Rahnella sp. Y9602] Length = 293 Score = 284 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 81/265 (30%), Positives = 142/265 (53%), Gaps = 9/265 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + ++L+FDSG+GGL V ++R ++P+ H+IY D+V FPYG + + +R++ + + + Sbjct: 26 RPTVLVFDSGVGGLSVYDEVRQMLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVA 85 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA T+ LR+ F S +G VPAIK AA T++G++ +L+T AT+ Sbjct: 86 KRHPLSIIVIACNTASTVSLPALRAKF-SCPVVGVVPAIKPAAKLTRNGVVGLLATRATV 144 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT +L+ + + C I ++ S L E G ++ +KK + + + Sbjct: 145 QRPYTHDLVARFATDCQILMLGSAELVELAEAKLHGEEVSLAALKKILHPWL--RLREPP 202 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL-- 250 D +VL CTH+PL+ Q+ P +D+ +IARRA L+ + D + Sbjct: 203 DTVVLGCTHFPLLSQELSQVLPDGTRMIDSGSAIARRAHWLIETSHVPIPERKADVEIEC 262 Query: 251 --FLSGKPDIAMR--RLMQGFGLKS 271 + A ++Q +G +S Sbjct: 263 VAYCMAMTAEAQSLLPVLQAYGFRS 287 >gi|59713040|ref|YP_205816.1| glutamate racemase [Vibrio fischeri ES114] gi|75431448|sp|Q5E218|MURI_VIBF1 RecName: Full=Glutamate racemase gi|59481141|gb|AAW86928.1| glutamate racemase [Vibrio fischeri ES114] Length = 262 Score = 284 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 130/256 (50%), Gaps = 10/256 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ILIFDSGIGGL V +++++ +P +IY D+ FPYG + L +R + S + Sbjct: 1 MPKHILIFDSGIGGLSVYKEIKYQLPLAKYIYAFDNAAFPYGELTESVLIERTTHIISKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 K+ + VIACNTA T++ LR + +G VPAIK AA S I +L+TPAT Sbjct: 61 CSKFPIDIVVIACNTASTVVLPSLREKL-DIPVVGVVPAIKPAALV--SNKIGLLATPAT 117 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R+YT +LI S+ + L+ S L EE GI + E+K+ + + Sbjct: 118 VKRSYTYDLIKSFAPISDVQLLGSTRLVEMAEEKMIGIDVDITELKEILSPW-----QNK 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D IVL CTH+P + + ++ + +D+ ++IARR + LL +F+ Sbjct: 173 VDTIVLGCTHFPFLKNEIKKALGNKILLIDSGEAIARRVKQLLNGDEVESAVLFEGEVFC 232 Query: 252 LSGKPDIAMRRLMQGF 267 P I L F Sbjct: 233 --SAPSIKEEALNHTF 246 >gi|237703008|ref|ZP_04533489.1| glutamate racemase MurI [Escherichia sp. 3_2_53FAA] gi|115515364|gb|ABJ03439.1| glutamate racemase MurI [Escherichia coli APEC O1] gi|226902945|gb|EEH89204.1| glutamate racemase MurI [Escherichia sp. 3_2_53FAA] gi|323954254|gb|EGB50039.1| glutamate racemase [Escherichia coli H263] Length = 289 Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281 >gi|110345903|gb|ABG72140.1| glutamate racemase [Escherichia coli 536] Length = 289 Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281 >gi|311108362|ref|YP_003981215.1| glutamate racemase [Achromobacter xylosoxidans A8] gi|310763051|gb|ADP18500.1| glutamate racemase [Achromobacter xylosoxidans A8] Length = 267 Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 5/256 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I I+DSG+GGL VL+ +R +P + +YVAD PYG +++R + + Sbjct: 4 ESPIGIYDSGVGGLSVLRAIRDALPHEYLLYVADSAHVPYGEKTQDYVEQRASTIADYFV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNTA +LR P + +G PAIK AA T SG++ + +T TL Sbjct: 64 SRQAKAM-VVACNTATAAAIAQLRQRHPQLIIIGVEPAIKPAAHLTSSGVVGVFATTGTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+ + I VE+ E ++ + E Sbjct: 123 ASPKFAALVQRQAPEVRILFRPCPEWVRLVEQGVLSGPEAEAAVRAPVA----ELREAGA 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV+VL CTH+P + + + V L+ +AR R L + D L Sbjct: 179 DVLVLGCTHFPFLRDAIQAAAGPGVPLLETGAPVARWLRHQLQERGLLRADGPGDLRLET 238 Query: 253 SGKPDIAMRRLMQGFG 268 SG + + G Sbjct: 239 SGSAEALSALAPRLLG 254 >gi|227540150|ref|ZP_03970199.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC 33300] gi|227240011|gb|EEI90026.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC 33300] Length = 275 Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 103/261 (39%), Gaps = 8/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG GGL V ++++ +PEY +IY+ D+ PYGN + + + Sbjct: 8 NSPIGVFDSGYGGLSVFKEIKKELPEYDYIYLGDNARIPYGNRSFETVYQFTKECVFKLF 67 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 D L ++ACNTA ++ P LG + P + YT + I IL+T Sbjct: 68 D-LGCDLVILACNTASAKALRSIQQHDLPPGKKVLGVIRPTTEIIKEYTTTNKIGILATT 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ I+ + + + VE + ++K+I + Sbjct: 127 GTVKSESYKIEINKFYPEIEVFQHDCPFWVPLVENNEIDTEGARYFVEKDIHELLS--QS 184 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247 D IVLACTHYPL++ V +Q P + + +A + L R Sbjct: 185 SDIDTIVLACTHYPLLLPVIKQFVPPHIQIISQGPIVAHSLKNYLERHPEVEQNCSKGST 244 Query: 248 HALFLSGKPDIAMRRLMQGFG 268 F + + FG Sbjct: 245 LQFFTTDDASGFEEKAEIFFG 265 >gi|309378294|emb|CBX23082.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|325144995|gb|EGC67278.1| glutamate racemase [Neisseria meningitidis M01-240013] Length = 270 Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 241 YVSDIPLKFRTIGERFLG 258 >gi|296274260|ref|YP_003656891.1| glutamate racemase [Arcobacter nitrofigilis DSM 7299] gi|296098434|gb|ADG94384.1| glutamate racemase [Arcobacter nitrofigilis DSM 7299] Length = 266 Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 7/255 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSGIGGL V++ + ++ Y+AD PYG + K + + ++ + Sbjct: 3 VGVFDSGIGGLTVVKAITEVLKGAEIFYIADTKFAPYGEKSKEQILKHSFNIANYLVKTH 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + ELR FP++ +G P IK A + +++G I IL+TPATL+ Sbjct: 63 NIDALVVACNTATSAAIKELREEFPNLIVVGTEPGIKPAISLSKNGKIGILATPATLKGE 122 Query: 136 YTSNLIHSY---VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 L+ S ++ + L ++E I+ ++ + ++ K Sbjct: 123 KYQLLVDKLSNASSNITLYEQACPGLVQQIENG----DIEGEKTFEMLKNWLKPMSEKGV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D IVL CTHYPL+ +V +++ + ++ +IA R + L V + F Sbjct: 179 DTIVLGCTHYPLVGNVIKKIMGENTNLIETGYAIANRLKDLSKNCGHFNDGVLKVNVYFT 238 Query: 253 SGKPDIAMRRLMQGF 267 S + + +++ + Sbjct: 239 SDINETMISKILNSW 253 >gi|269955858|ref|YP_003325647.1| glutamate racemase [Xylanimonas cellulosilytica DSM 15894] gi|269304539|gb|ACZ30089.1| glutamate racemase [Xylanimonas cellulosilytica DSM 15894] Length = 268 Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 99/262 (37%), Gaps = 12/262 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V + + +P +Y+ D PYG A++ + + D++ Sbjct: 3 DAPIGVFDSGVGGLTVARAILDQLPHEQVLYIGDTANAPYGPKPLAAVRAMALAVMDDLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAV-PAIKQAAAYTQSGLISILST 128 D+ L VIACN+A + + R + + + + PA ++A ++SG I ++ T Sbjct: 63 DQG-VKLLVIACNSATAVALPDARERYEVRRGIPVVEVIRPAARRAVVTSRSGRIGVIGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + H I + VE EI Sbjct: 122 KATIDSRAYEDAFH-VTPGLIITTQACPEFVPLVERGITSGP----EILAAAHRYLDPVR 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FD 246 D +VL CTHYPL+ + V + +++ A+ L ++ Sbjct: 177 DAGVDTLVLGCTHYPLLAGAISYVMGEDVTLVSSAEETAKDVYRTLVASGLERSPQAGPP 236 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 +H +G + G Sbjct: 237 EHRFVSTGDTAAFEEVARRFLG 258 >gi|167038101|ref|YP_001665679.1| glutamate racemase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|307266301|ref|ZP_07547841.1| glutamate racemase [Thermoanaerobacter wiegelii Rt8.B1] gi|320116507|ref|YP_004186666.1| glutamate racemase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|229486282|sp|B0KBP8|MURI_THEP3 RecName: Full=Glutamate racemase gi|166856935|gb|ABY95343.1| glutamate racemase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|306918679|gb|EFN48913.1| glutamate racemase [Thermoanaerobacter wiegelii Rt8.B1] gi|319929598|gb|ADV80283.1| glutamate racemase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 264 Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 16/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D+ P I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK Sbjct: 1 MDSRP--------IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + + ++ VIACNT +I +S + + F + AA YT + Sbjct: 53 FAKQILNFMREQK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKK 108 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +++T T+ I ++ + +E+ I + K Sbjct: 109 IGVIATTRTVESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYETASK---- 164 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 C E + K D +VL CTHYPL+ V ++ V +D + +A + L + + Sbjct: 165 CLKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNP 224 Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFG 268 ++ F+SG D ++ G Sbjct: 225 QIRGKAEFFVSGDKDNFIKTAEMLLG 250 >gi|73541920|ref|YP_296440.1| glutamate racemase [Ralstonia eutropha JMP134] gi|123624580|sp|Q46Z37|MURI_RALEJ RecName: Full=Glutamate racemase gi|72119333|gb|AAZ61596.1| glutamate racemase [Ralstonia eutropha JMP134] Length = 272 Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 6/254 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL+++R L+P +Y+AD PYG + ++ R + +L Sbjct: 7 APIGVFDSGLGGLSVLREIRALLPHESLLYLADSKYAPYGEKPEAFVQARTLQACEWLLA 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA + LR T P + +G P +K AAA +QS ++ +L+T TL+ Sbjct: 67 QGCKAL-VIACNTATGHAVELLRQTLP-VPIIGVEPGLKPAAAASQSKVVGVLATANTLK 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ S + + + L +E+ I +I+ ++ D Sbjct: 125 SGKFARLLASLDGESRFICEAGLGLVPLIEQG----DIDGPDIRGRLDNYLTPMLEAGAD 180 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + R + + +D +IAR+ L + F+S Sbjct: 181 TLVLGCTHYPFLSDTIRDMVGNQLTLVDTGSAIARQLARKLVEHDLAVAPGAVPQDRFVS 240 Query: 254 GKPDIAMRRLMQGF 267 K +R++ Sbjct: 241 TKDAAHLRQMAAAL 254 >gi|110807826|ref|YP_691346.1| glutamate racemase [Shigella flexneri 5 str. 8401] gi|161367471|ref|NP_290606.2| glutamate racemase [Escherichia coli O157:H7 EDL933] gi|161485830|ref|NP_709771.3| glutamate racemase [Shigella flexneri 2a str. 301] gi|161486412|ref|NP_838913.2| glutamate racemase [Shigella flexneri 2a str. 2457T] gi|161950019|ref|YP_405199.2| glutamate racemase [Shigella dysenteriae Sd197] gi|161984807|ref|YP_410264.2| glutamate racemase [Shigella boydii Sb227] gi|161986399|ref|YP_312888.2| glutamate racemase [Shigella sonnei Ss046] gi|162139734|ref|NP_312925.2| glutamate racemase [Escherichia coli O157:H7 str. Sakai] gi|254795974|ref|YP_003080811.1| glutamate racemase [Escherichia coli O157:H7 str. TW14359] gi|261226407|ref|ZP_05940688.1| glutamate racemase [Escherichia coli O157:H7 str. FRIK2000] gi|261256807|ref|ZP_05949340.1| glutamate racemase [Escherichia coli O157:H7 str. FRIK966] gi|291285389|ref|YP_003502207.1| Glutamate racemase [Escherichia coli O55:H7 str. CB9615] gi|293417477|ref|ZP_06660101.1| glutamate racemase [Escherichia coli B185] gi|54037865|sp|P63634|MURI_SHIFL RecName: Full=Glutamate racemase gi|54041258|sp|P63633|MURI_ECO57 RecName: Full=Glutamate racemase gi|123342230|sp|Q0SY24|MURI_SHIF8 RecName: Full=Glutamate racemase gi|110617374|gb|ABF06041.1| glutamate racemase [Shigella flexneri 5 str. 8401] gi|254595374|gb|ACT74735.1| glutamate racemase [Escherichia coli O157:H7 str. TW14359] gi|281603361|gb|ADA76345.1| putative Glutamate racemase [Shigella flexneri 2002017] gi|290765262|gb|ADD59223.1| Glutamate racemase [Escherichia coli O55:H7 str. CB9615] gi|291430997|gb|EFF03993.1| glutamate racemase [Escherichia coli B185] gi|320639143|gb|EFX08779.1| glutamate racemase [Escherichia coli O157:H7 str. G5101] gi|320644535|gb|EFX13596.1| glutamate racemase [Escherichia coli O157:H- str. 493-89] gi|320649859|gb|EFX18374.1| glutamate racemase [Escherichia coli O157:H- str. H 2687] gi|320655208|gb|EFX23157.1| glutamate racemase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660833|gb|EFX28283.1| glutamate racemase [Escherichia coli O55:H7 str. USDA 5905] gi|320665951|gb|EFX32977.1| glutamate racemase [Escherichia coli O157:H7 str. LSU-61] Length = 285 Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277 >gi|215489308|ref|YP_002331739.1| glutamate racemase [Escherichia coli O127:H6 str. E2348/69] gi|215267380|emb|CAS11831.1| glutamate racemase MurI [Escherichia coli O127:H6 str. E2348/69] Length = 285 Score = 284 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277 >gi|218701323|ref|YP_002408952.1| glutamate racemase [Escherichia coli IAI39] gi|226722984|sp|B7NU33|MURI_ECO7I RecName: Full=Glutamate racemase gi|218371309|emb|CAR19141.1| glutamate racemase [Escherichia coli IAI39] Length = 285 Score = 284 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277 >gi|237747808|ref|ZP_04578288.1| glutamate racemase [Oxalobacter formigenes OXCC13] gi|229379170|gb|EEO29261.1| glutamate racemase [Oxalobacter formigenes OXCC13] Length = 283 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 16/266 (6%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I IFDSG+GGL VL+ + +P+ +Y AD PYG+ + + +R FL +D Sbjct: 13 KASGPIGIFDSGVGGLSVLRHIATQLPDEELVYFADSGYAPYGDKPEEFVVERS-FLITD 71 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L K V+ACNTA + LR +P + +G P +K AAA T +G + +++T Sbjct: 72 FLLKQDIKALVVACNTATAMAIHLLREKYPDLPIVGVEPGLKPAAAKTITGTVGVMATER 131 Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL L Q H + + +A +E ++ + I + ++ + Sbjct: 132 TLASNKFHVLHQLLNDQTGVHFIMQACNGMADLIEH----AELDSEPIFELVQRYLLPLL 187 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPW----PVDWLDNSDSIARRARCLLPRINTHQTRV 244 ++ D IVL CTHYP + HV +++ ++ +D ++AR+ + LL ++ Sbjct: 188 EQKADTIVLGCTHYPFVRHVIEKVAADYGSTQLNIIDTGYAVARQLKHLLDIYGLNKNGC 247 Query: 245 FDDH--ALFLSGKPDI---AMRRLMQ 265 D + SG P + RL+Q Sbjct: 248 SPDSLVRAYTSGDPATISHLISRLLQ 273 >gi|126436408|ref|YP_001072099.1| glutamate racemase [Mycobacterium sp. JLS] gi|126236208|gb|ABN99608.1| glutamate racemase [Mycobacterium sp. JLS] Length = 280 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++++ Sbjct: 11 PVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDDLVER 70 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA + + R + ++ + + PA+++A A T++G I ++ T AT+ Sbjct: 71 GVKAL-VIACNTASSACLRDARERYAPVSVVEVILPAVRRAVATTRNGRIGVIGTAATIA 129 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + V+ VE + ++ EG + D Sbjct: 130 SGAYQDAFAA-ARDIEVIGVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRADVD 184 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---- 249 +VL CTHYP++ + + V + +++ A+ +L ++ + D A Sbjct: 185 TLVLGCTHYPMLSGLIQLAMGDQVTLVSSAEETAKDLLRVLTELDLLRPHPADPGATPAT 244 Query: 250 --LFLSGKPDIAMRRLMQGFG 268 +G P+ + G Sbjct: 245 RVFESTGDPEAFATLATRFLG 265 >gi|194335598|ref|YP_002017392.1| glutamate racemase [Pelodictyon phaeoclathratiforme BU-1] gi|194308075|gb|ACF42775.1| glutamate racemase [Pelodictyon phaeoclathratiforme BU-1] Length = 273 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 110/250 (44%), Gaps = 7/250 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSGIGGL V++ ++ +P +Y D PYG ++K + +L Sbjct: 10 EAPIGIFDSGIGGLTVVKAVQAALPFERILYFGDTARVPYGPKSQVTIRKYAAD-DTAML 68 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 +YQP + ++ACNT L D ++ + + G + A + A T++ I ++ T AT Sbjct: 69 MRYQPKIIIVACNTVSALALDVVQKSCGVIPVTGVLRAGARLATEVTRNNRIGVIGTRAT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I+ + S+ + + + EE I + E E + Sbjct: 129 VSSNAYGIAINEFNSEIEVVSRACPLFVPLAEEGF----IDHLATRLIAEEYLAEITREG 184 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250 D +VL CTHYP++ V ++ + +D+++++A R R LL + + L Sbjct: 185 IDTLVLGCTHYPILRKVIEEIVGPEIRIIDSAEAVALRTRELLEESGHLSSSLKVSAPHL 244 Query: 251 FLSGKPDIAM 260 +S P Sbjct: 245 LVSDLPQKFS 254 >gi|261363930|ref|ZP_05976813.1| glutamate racemase [Neisseria mucosa ATCC 25996] gi|288567943|gb|EFC89503.1| glutamate racemase [Neisseria mucosa ATCC 25996] Length = 269 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 111/263 (42%), Gaps = 8/263 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + Sbjct: 1 MTTSKQRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISIL 126 +L+ VIACNT + ++R +M L + A QAA T++ I I+ Sbjct: 61 VDFLLE-NDVKALVIACNTIAAVAGQKIRQKAGNMPVLDVISAGAQAALNTTRNNKIGII 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ + IH+ + ++ +L VEE ++ +++ ++ ++ Sbjct: 120 ATNTTVNSNAYARAIHAQNPDTLVRTQATPLLVPLVEEGWLDHEVTRLTVREYLKPLLVD 179 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-F 245 D +VL CTH+PL+ + + + V +D++ + A L + T Sbjct: 180 ----DIDTLVLGCTHFPLLKPLIGKEA-QNVALVDSAITTAEATAQALAQAGLLNTENDS 234 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 D+ ++S P + G Sbjct: 235 PDYRFYVSDIPLRFRTIGERFLG 257 >gi|317969725|ref|ZP_07971115.1| glutamate racemase [Synechococcus sp. CB0205] Length = 278 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 7/260 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL + +++ +P +YVAD PYG+ ++ + + ++ Sbjct: 4 APIGLFDSGVGGLSIWRQVVHALPSESLLYVADQANVPYGHRSADEIQANSLGIADYLVA 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA + + LR FP + LG PA+K A T+SG++ +++TPAT + Sbjct: 64 QG-CKAIVLACNTASAVALEPLRQRFPQLPILGLEPAVKPAVQLTRSGVVGVMATPATFQ 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + Y + + + LA VE+ + + G D Sbjct: 123 GQLYRATVGRYATAVQVVEQVCVGLAELVEQGDLEGPDCD----ARLMGYLQPMLDAGAD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LF 251 IVL CTHYP ++ R+L + LD + ++AR +L + A Sbjct: 179 TIVLGCTHYPFVIESIRRLVGPAMAVLDPAPAVARHLADVLRQAELLAMDSAGVLAPRFA 238 Query: 252 LSGKPDIAMRRLMQGFGLKS 271 + P R L + G+ S Sbjct: 239 TTADPLAFNRALSRLVGVSS 258 >gi|269122263|ref|YP_003310440.1| glutamate racemase [Sebaldella termitidis ATCC 33386] gi|268616141|gb|ACZ10509.1| glutamate racemase [Sebaldella termitidis ATCC 33386] Length = 258 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 10/241 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI IFDSG+GGL VL+++R + P Y D PYG + + + +L K Sbjct: 2 SIGIFDSGLGGLTVLKEVRKIFPNEEIFYFGDTARVPYGEKTKELIIRYSKEITDFLLTK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA L +EL++ + + +G + A ++ A + T++ I ++ T AT+ Sbjct: 62 -NINVLVVACNTATALALEELKAVY-DIPVIGVIEAGVRSALSVTKTNEIGVIGTKATIN 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 IH ++ + + VEE +I E IK + + D Sbjct: 120 SEKYKQEIHRRNKDIVVYQKACPLFVHVVEEGLLDGEIIESIIKHYLGDF-----DDKVD 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L CTHYPL+ +++ P ++ +D + A + +L N + + ++S Sbjct: 175 TLILGCTHYPLLKKEIQKIYP-DLNLIDPAMETALDLKKVLTENNAAENK-GGHVKFYVS 232 Query: 254 G 254 Sbjct: 233 D 233 >gi|117926510|ref|YP_867127.1| glutamate racemase [Magnetococcus sp. MC-1] gi|117610266|gb|ABK45721.1| glutamate racemase [Magnetococcus sp. MC-1] Length = 272 Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 6/255 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL VL+ + P+ FIY+ D PYG +++ + + L Sbjct: 9 RPIGIFDSGVGGLTVLRTLARRFPQESFIYLGDTARVPYGTKSPRTVERYTLQVADH-LQ 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 ++ V ACNTA L LR+ P + G + P + A TQ+G + ++ T AT+ Sbjct: 68 RHGVKGVVAACNTASALGLGALRAHQPKLPVQGVIVPGCRSALNVTQTGRVGVIGTRATI 127 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ + ++ + EE E +++ + Sbjct: 128 SSGAYRTTLNLLNPTIEVSDIACPLFVPLAEEGWTHHAATEMIVRETLTPLL----DSDI 183 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP++ V +++ V +D+++++A L + L+L Sbjct: 184 DTLILGCTHYPVLKEVIQKVMGEGVMLVDSAEAVADELEQRLSDTILPNHSGAERTILYL 243 Query: 253 SGKPDIAMRRLMQGF 267 + + F Sbjct: 244 VTDEAARFASVARRF 258 >gi|170017584|ref|YP_001728503.1| glutamate racemase [Leuconostoc citreum KM20] gi|169804441|gb|ACA83059.1| Glutamate racemase [Leuconostoc citreum KM20] Length = 289 Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 101/263 (38%), Gaps = 8/263 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 N I DSG+GGL V+++ + +P FI++ D PYG + + + + Sbjct: 2 NKNNPIGFVDSGVGGLTVIKEAQKQLPNEQFIFIGDTARMPYGPRPTEEVVRYTFQMANY 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 ++++ L VIACNTA + +L+ T ++ +G + P A T++ I I++T Sbjct: 62 LVEQKHIKLLVIACNTATARVLSQLQRTL-AIPVIGVIQPGAWAATKTTKNNRIGIIATQ 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ N IH++ I + VE K E + + + Sbjct: 121 GTVDSGAYDNEIHAFRDDVQITSQAEPEFVQLVESN----KYHEAATRNIVSQHLEHMKS 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDD 247 + D ++L CTH+PL+ V +D R + L + + + Sbjct: 177 QDVDTLILGCTHFPLLATFIEAAMGPQVTLIDAGRETVRVIQEALLMHDLYTSVAHSHSK 236 Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270 + +G L Sbjct: 237 DIYYTTGNTANFRIIATDWLDLP 259 >gi|117928893|ref|YP_873444.1| glutamate racemase [Acidothermus cellulolyticus 11B] gi|166231023|sp|A0LVJ8|MURI_ACIC1 RecName: Full=Glutamate racemase gi|117649356|gb|ABK53458.1| glutamate racemase [Acidothermus cellulolyticus 11B] Length = 263 Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V + + L+P YVAD FPYG +++ + + ++ Sbjct: 3 NLPIGVFDSGVGGLTVARAILDLLPHEPLYYVADTAHFPYGTKSIAEVRQYGLAVLDRMV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 L VIACN+A + + + R + PA+++A + T++G + ++ TPAT+ Sbjct: 63 A-DGVKLLVIACNSASSALLRDARERYDVPVVEVIQPAVRKAVSATRNGKVGVIGTPATI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + VE DE+ + + + Sbjct: 122 ASMAYDDAFAA-APHVDLTTAACPRFVEFVEAGIT----MSDELLECAKEYLAPIVERGC 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHAL 250 D ++L CTHYP + + V + ++D AR +L + H Sbjct: 177 DTLILGCTHYPFLAGAIALVVGDEVMLVSSADETARDVYRVLVSRGLTRPASAPPPVHRF 236 Query: 251 FLSGKPDIAMRRLMQGFG 268 +G P+ R + G Sbjct: 237 AATGDPEPFSRLGRRFLG 254 >gi|78188551|ref|YP_378889.1| glutamate racemase [Chlorobium chlorochromatii CaD3] gi|78170750|gb|ABB27846.1| glutamate racemase [Chlorobium chlorochromatii CaD3] Length = 267 Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 8/259 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 +N I IFDSGIGGL V++ ++ +P IY D PYG ++K S Sbjct: 2 NTENPIGIFDSGIGGLTVVKAIQAALPSERIIYFGDTARVPYGPKSQVTIRKYAAD-DSA 60 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129 IL +YQP L ++ACNT L D + S+ LG + A A +++G I ++ T Sbjct: 61 ILMRYQPKLIIVACNTVSALALDVVEKCCGSVPVLGVLKAGASLAVQASRNGRIGVIGTQ 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ + I+ + + + EE I+ D E Sbjct: 121 ATVCSNAYACAINQQAPDYEVTSKACPLFVPLAEEGF----IEHDATALIAEHYLAPLRT 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248 D +VL CTHYP++ +V + + +D+++++A +A +L N Sbjct: 177 HNIDTLVLGCTHYPILRNVIERTIGSNIRIIDSAEAVALQAGEMLRERNLLNQSPDKKTP 236 Query: 249 ALFLSGKPDIAMRRLMQGF 267 L +S P L Q F Sbjct: 237 HLLVSDLPQKFST-LYQLF 254 >gi|254422538|ref|ZP_05036256.1| glutamate racemase [Synechococcus sp. PCC 7335] gi|196190027|gb|EDX84991.1| glutamate racemase [Synechococcus sp. PCC 7335] Length = 307 Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 13/275 (4%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M I + + I +FDSG+GGL VL++MR +P IY D PYGN + Sbjct: 1 MSIPALSSKLRSNFKIGVFDSGVGGLTVLREMRSHLPAESIIYFGDTARVPYGNRSKSEI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119 + + + + ++ + + L V+ACNT+ L+ +E+RS FP + LG V P + A Sbjct: 61 LRFVREIIAWMI-RLEVKLIVMACNTSSALVLEEVRSEFP-IPILGIVLPGARGAVKT-- 116 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 I ++ST AT + + S + V +E K+ Sbjct: 117 GKRIGVVSTEATAKSDAYLQAVQEIDSTIRVWQVGCPEFVPLIESGRSYDPYTLTVAKRY 176 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 +E D +V CTHYP + VF+Q+ P + +D + ++ A L + Sbjct: 177 LE----PLIAAGIDTLVYGCTHYPHLAPVFKQILPTRIKLVDPAKHLSVAAAQELEILGL 232 Query: 240 HQTRVFD----DHALFLSGKPDIAMRRLMQGFGLK 270 + + ++SG P + Q G + Sbjct: 233 CNSNAVETGATPTEFYVSGDPLKFAKVSQQWLGYR 267 >gi|83748331|ref|ZP_00945355.1| Glutamate racemase [Ralstonia solanacearum UW551] gi|207723937|ref|YP_002254335.1| glutamate racemase protein [Ralstonia solanacearum MolK2] gi|83724953|gb|EAP72107.1| Glutamate racemase [Ralstonia solanacearum UW551] gi|206589144|emb|CAQ36106.1| glutamate racemase protein [Ralstonia solanacearum MolK2] Length = 277 Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 6/248 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + + Sbjct: 1 MTARAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRV 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++ VIACNTA LR ++ +G P +K A A +QS ++ +L+ Sbjct: 61 CEWLV-GQGCKALVIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T +TLR + L+ + C + L +E + + ++ Sbjct: 119 TESTLRSDKFARLLGNVSGDCQVLCQPGYGLVPLIERG----DTHSPAVLELLQAYLQPM 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D +VL CTHYP + ++++ + +D ++AR L + Sbjct: 175 LDAGADTLVLGCTHYPFLRDAIQEIAGERLALIDTGHAVARHLGRTLAAAHLQAAGAAAS 234 Query: 248 HALFLSGK 255 +G Sbjct: 235 PRFLSTGD 242 >gi|237715314|ref|ZP_04545795.1| glutamate racemase [Bacteroides sp. D1] gi|262405155|ref|ZP_06081705.1| glutamate racemase [Bacteroides sp. 2_1_22] gi|294643545|ref|ZP_06721351.1| glutamate racemase [Bacteroides ovatus SD CC 2a] gi|294807052|ref|ZP_06765871.1| glutamate racemase [Bacteroides xylanisolvens SD CC 1b] gi|229444623|gb|EEO50414.1| glutamate racemase [Bacteroides sp. D1] gi|262356030|gb|EEZ05120.1| glutamate racemase [Bacteroides sp. 2_1_22] gi|292641120|gb|EFF59332.1| glutamate racemase [Bacteroides ovatus SD CC 2a] gi|294445751|gb|EFG14399.1| glutamate racemase [Bacteroides xylanisolvens SD CC 1b] Length = 280 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P+ LG + P ++ +++ I +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + + + + S VE + + I+K I+ Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D ++L CTH+P+++ RQ P + + + +A + L R + Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + Sbjct: 247 GNCQFYTTEAEEKFSE 262 >gi|163815643|ref|ZP_02207016.1| hypothetical protein COPEUT_01818 [Coprococcus eutactus ATCC 27759] gi|158449280|gb|EDP26275.1| hypothetical protein COPEUT_01818 [Coprococcus eutactus ATCC 27759] Length = 255 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 5/250 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 SI +FDSG+GG+ VL+ + LMP ++IY D PYG A+ +R + +L Sbjct: 4 RSIGVFDSGLGGISVLRDIVELMPYENYIYFGDSAHAPYGTKTREAILERSEQCTNFLLA 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K VIACNTA ++ LR +PS+ +G PA+K A + + +++++TPATL Sbjct: 64 K-DVKAIVIACNTATSVAASTLRQQYPSIPIIGIEPALKPAVLWKEHDKVAVMATPATLA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L+ Y + I+ + LA VE +EI + + K+ D Sbjct: 123 LPKFHELMKHYSKESDIYPIPCPGLADYVERGI----FDGEEITEFLRELLAPYLAKKID 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTHYP + V ++++ V + + A + L + F S Sbjct: 179 AIVLGCTHYPFVEKVIKRIAGPDVKIFNGAHGTALELQRRLRIAELLTPSIEKGSVEFYS 238 Query: 254 GKPDIAMRRL 263 + +L Sbjct: 239 SSTNPKTIKL 248 >gi|304570642|ref|YP_832062.2| glutamate racemase [Arthrobacter sp. FB24] Length = 351 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 12/268 (4%) Query: 7 PCEKKL-QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P + + I IFDSG+GGL V + + +P +YV D PYG ++ + Sbjct: 35 PDDSPMGSRPIGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANAL 94 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSG 121 + +++D L IACN+A + + R + + + + PA+++A A T+SG Sbjct: 95 GVMDELVDSG-VKLLTIACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVAATRSG 153 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + ++ T AT+ + + HI V+ S VE E+ Sbjct: 154 RVGVIGTSATIGSRAYEDTFAA-APDLHITSVACPAFVSYVEAGIT----TGPELLAVAR 208 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 D +VL CTHYPL+ V + V + +++ A+ L + + Sbjct: 209 EYLEPLRTAGVDTVVLGCTHYPLLTGVISYVMGEDVTLVSSAEETAKDVYRALVSHDLQR 268 Query: 242 T-RVFDDHALFLSGKPDIAMRRLMQGFG 268 T +H +G+ + G Sbjct: 269 TLEAPPEHHFIATGEAGQFETLARRFLG 296 >gi|295093321|emb|CBK82412.1| glutamate racemase [Coprococcus sp. ART55/1] Length = 255 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 5/250 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 SI +FDSG+GG+ VL+ + LMP ++IY D PYG A+ +R + +L Sbjct: 4 RSIGVFDSGLGGISVLRDIVELMPCENYIYFGDSAHAPYGTKTREAILERSEQCTNFLLA 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K VIACNTA ++ LR +PS+ +G PA+K A + + +++++TPATL Sbjct: 64 K-DVKAIVIACNTATSVAASTLRQQYPSIPIIGIEPALKPAVLWKEHDKVAVMATPATLA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L+ Y + I+ V LA VE+ +EI + ++G K D Sbjct: 123 LPKFHELMKHYSKESDIYPVPCPGLADYVEKGI----FDGEEITEFLKGLLAPSLEKHVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTHYP + V ++++ V + + A + L + F S Sbjct: 179 AIVLGCTHYPFVEKVIQRIAGPDVKIFNGAHGTALELQRRLRIAELLTPSIEKGTVEFYS 238 Query: 254 GKPDIAMRRL 263 + +L Sbjct: 239 SSTNPETIKL 248 >gi|212703906|ref|ZP_03312034.1| hypothetical protein DESPIG_01959 [Desulfovibrio piger ATCC 29098] gi|212672609|gb|EEB33092.1| hypothetical protein DESPIG_01959 [Desulfovibrio piger ATCC 29098] Length = 276 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 2/242 (0%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL VL+ + +P + +Y+ D PYG + + + ++D+ Sbjct: 8 PIGIFDSGMGGLTVLKAISGRLPGENLLYLGDTARLPYGTKSRDTIIRYTLKAAGRLVDE 67 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA + ELR F + LG V P + A A +++ I +++T AT+ Sbjct: 68 G-VKMLVVACNTATSAALPELREHFAPLPVLGVVRPGAEAAVAASRNKRIVVIATEATIA 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I S + + + + EE I E + + F + R D Sbjct: 127 GGAYQQAIASLCPEARVQGRACTLFVPLAEEGWMDGPIVEGIASRYLGDLFSPERPDRPD 186 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTH+PL R + V +D++++ A L ++ + F++ Sbjct: 187 TLVLGCTHFPLFREALRHVVGEDVRIVDSAETAAVAVEDRLRELDLLRREDAPGTHRFMT 246 Query: 254 GK 255 Sbjct: 247 TD 248 >gi|256750841|ref|ZP_05491725.1| glutamate racemase [Thermoanaerobacter ethanolicus CCSD1] gi|256750176|gb|EEU63196.1| glutamate racemase [Thermoanaerobacter ethanolicus CCSD1] Length = 264 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 16/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D+ P I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK Sbjct: 1 MDSRP--------IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + + ++ VIACNT +I +S + + F + A YT + Sbjct: 53 FAKQILNFMREQK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAVLYTINKK 108 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +++T T+ I ++ + +E+ I + K Sbjct: 109 IGVIATTRTVESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYETASK---- 164 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 C E + K D +VL CTHYPL+ V ++ V +D + +A + L + + Sbjct: 165 CLKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNP 224 Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFG 268 ++ F+SG D ++ G Sbjct: 225 QIRGKAEFFVSGDKDNFIKTAEMLLG 250 >gi|253571293|ref|ZP_04848700.1| glutamate racemase [Bacteroides sp. 1_1_6] gi|251839246|gb|EES67330.1| glutamate racemase [Bacteroides sp. 1_1_6] Length = 280 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 106/256 (41%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILNKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P LG + P ++ TQS I +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGDITQSRHIGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + ++ + VE + + I+K I+ Sbjct: 129 TAGTIKSESYPLEIHKLFPDIQVSGIACPMWVPLVENNESQNEGADYFIRKYIDQLLS-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + D ++L CTHYP+++ ++ +P + + + +A + L R + Sbjct: 187 KDPEIDTMILGCTHYPILLPKIQKYTPKHIRIVAQGEYVAESLKDYLSRHPEMNAKCTQN 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + Sbjct: 247 GSCLFYTTEAEEKFVE 262 >gi|194099309|ref|YP_002002407.1| glutamate racemase [Neisseria gonorrhoeae NCCP11945] gi|193934599|gb|ACF30423.1| glutamate racemase [Neisseria gonorrhoeae NCCP11945] Length = 326 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 122 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 123 -GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 182 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 237 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 238 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 296 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 297 YVSDIPLKFRTIGERFLG 314 >gi|298386827|ref|ZP_06996382.1| glutamate racemase [Bacteroides sp. 1_1_14] gi|298260501|gb|EFI03370.1| glutamate racemase [Bacteroides sp. 1_1_14] Length = 280 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILNKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P LG + P ++ TQS I +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGDITQSRHIGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + ++ + VE + + I+K I+ Sbjct: 129 TAGTIKSESYPLEIHKLFPDIQVSGIACPMWVPLVENNESQNEGADYFIRKYIDQLLS-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + D ++L CTHYP+++ ++ +P + + + +A + L R + + Sbjct: 187 KDPEIDTMILGCTHYPILLPKIQEYTPKHIRIVAQGEYVAESLKDYLSRHPEMNAKCTKN 246 Query: 248 HA--LFLSGKPDIAMR 261 + + + + + Sbjct: 247 GSCLFYTTEAEEKFVE 262 >gi|162138273|ref|YP_672041.2| glutamate racemase [Escherichia coli 536] gi|306813762|ref|ZP_07447938.1| glutamate racemase [Escherichia coli NC101] gi|331649824|ref|ZP_08350904.1| glutamate racemase [Escherichia coli M605] gi|281181040|dbj|BAI57370.1| glutamate racemase [Escherichia coli SE15] gi|305852760|gb|EFM53207.1| glutamate racemase [Escherichia coli NC101] gi|331041457|gb|EGI13607.1| glutamate racemase [Escherichia coli M605] Length = 285 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277 >gi|91213519|ref|YP_543505.1| glutamate racemase [Escherichia coli UTI89] gi|162317562|ref|YP_859563.2| glutamate racemase [Escherichia coli APEC O1] gi|218561042|ref|YP_002393955.1| glutamate racemase [Escherichia coli S88] gi|122421619|sp|Q1R3U0|MURI_ECOUT RecName: Full=Glutamate racemase gi|226722983|sp|B7MIA7|MURI_ECO45 RecName: Full=Glutamate racemase gi|91075093|gb|ABE09974.1| glutamate racemase [Escherichia coli UTI89] gi|218367811|emb|CAR05605.1| glutamate racemase [Escherichia coli S88] gi|294491460|gb|ADE90216.1| glutamate racemase [Escherichia coli IHE3034] gi|307629048|gb|ADN73352.1| glutamate racemase [Escherichia coli UM146] gi|323949465|gb|EGB45354.1| glutamate racemase [Escherichia coli H252] Length = 285 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277 >gi|291043190|ref|ZP_06568913.1| glutamate racemase [Neisseria gonorrhoeae DGI2] gi|291012796|gb|EFE04779.1| glutamate racemase [Neisseria gonorrhoeae DGI2] Length = 285 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 12/269 (4%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 K++N Q I +FDSGIGGL ++ + +P + IY D PYG ++ Sbjct: 15 KMEN----IGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIE 70 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQS 120 M + +L + VIACNT + ++R +M L + A K A A T++ Sbjct: 71 NFSMQIVDFLL-GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRN 129 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I I++T T+ + IH + ++ +L VEE ++ + + + Sbjct: 130 NKIGIIATNTTVNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYL 189 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + D +VL CTH+PL+ + + + V +D++ + A +L + Sbjct: 190 KPLLAD----GIDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLL 244 Query: 241 QT-RVFDDHALFLSGKPDIAMRRLMQGFG 268 T D+ ++S P + G Sbjct: 245 DTGNNNPDYRFYVSDIPLKFRTIGERFLG 273 >gi|330717928|ref|ZP_08312528.1| glutamate racemase [Leuconostoc fallax KCTC 3537] Length = 277 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 96/258 (37%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I + DSGIGGL V+++ +P IY+ D PYG + + ++ Sbjct: 4 NKPIGMVDSGIGGLTVVKESLEKLPNEQIIYIGDTARMPYGPRTPEEVIAFTKQMADFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 L VIACNTA L+ P + +G + +A T + I I++T T Sbjct: 64 ATKDIKLLVIACNTATASALIPLQEMLP-IPVIGVINSGASRAVQATHNQKIGIIATEGT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + ++ I + Q + + VE+ + + + ++K ++ + Sbjct: 123 IASQIYTHKIRALNQQIEVFSQAEPDFVKLVEDNQYRLPVAQHQVKAHLQS----LKQAN 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249 D ++L CTH+PL+ + V +D L + Q R H Sbjct: 179 IDTLILGCTHFPLLRPFIVEAFGELDVTLIDAGAVTVDTVDDYLKAHDLSAQKRTRPHHT 238 Query: 250 LFLSGKPDIAMRRLMQGF 267 + +G R Q Sbjct: 239 YYTTGDVQQFDRIASQWL 256 >gi|293398523|ref|ZP_06642701.1| glutamate racemase [Neisseria gonorrhoeae F62] gi|291610994|gb|EFF40091.1| glutamate racemase [Neisseria gonorrhoeae F62] Length = 326 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 122 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 123 -GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 182 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 237 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 238 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 296 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 297 YVSDIPLKFRTIGERFLG 314 >gi|331660531|ref|ZP_08361465.1| glutamate racemase [Escherichia coli TA206] gi|331052480|gb|EGI24517.1| glutamate racemase [Escherichia coli TA206] Length = 289 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 86/272 (31%), Positives = 147/272 (54%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+S +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSSAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281 >gi|298345217|ref|YP_003717904.1| glutamate racemase [Mobiluncus curtisii ATCC 43063] gi|298235278|gb|ADI66410.1| glutamate racemase [Mobiluncus curtisii ATCC 43063] Length = 269 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 104/264 (39%), Gaps = 14/264 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P IY+ D PYG +K+ + + ++ Sbjct: 3 NAPIGIFDSGLGGLTVARSIIDQLPGESVIYIGDTANSPYGTKPVERVKELSLSVMDKLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 D+ + VIACNTA RS + + L + PA+ +A + T++G I +++T Sbjct: 63 DRG-VKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIATH 121 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ +H+Y Q + + VE E+ Sbjct: 122 TTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSGP----ELLAVAREYLEPIRD 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR----INTHQTRV 244 D +VL CTHYPL+ + + V + +++ A R LL + + V Sbjct: 177 AGVDTLVLGCTHYPLLSGIISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGTDTV 236 Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268 + +G R + G Sbjct: 237 NPRYQFLATGDTQTFTRLARRFLG 260 >gi|254039229|ref|ZP_04873279.1| glutamate synthase [Escherichia sp. 1_1_43] gi|331644705|ref|ZP_08345824.1| glutamate racemase [Escherichia coli H736] gi|42876|emb|CAA23637.1| unnamed protein product [Escherichia coli] gi|42878|emb|CAA23638.1| unnamed protein product [Escherichia coli] gi|290428|gb|AAA23677.1| glutamate synthase [Escherichia coli] gi|396314|gb|AAC43073.1| glutamate synthase [Escherichia coli str. K-12 substr. MG1655] gi|226838665|gb|EEH70694.1| glutamate synthase [Escherichia sp. 1_1_43] gi|323934456|gb|EGB30869.1| glutamate racemase [Escherichia coli E1520] gi|323939048|gb|EGB35266.1| glutamate racemase [Escherichia coli E482] gi|323969719|gb|EGB65003.1| glutamate racemase [Escherichia coli TA007] gi|331036167|gb|EGI08403.1| glutamate racemase [Escherichia coli H736] Length = 289 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P + ++Q +G ++ Sbjct: 250 AKSADANIAFCMAMTPGAEQLLPVLQRYGFET 281 >gi|88856297|ref|ZP_01130956.1| glutamate racemase [marine actinobacterium PHSC20C1] gi|88814381|gb|EAR24244.1| glutamate racemase [marine actinobacterium PHSC20C1] Length = 288 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 101/272 (37%), Gaps = 11/272 (4%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M+ I +FDSG+GGL V + + +P +YV D + PYG + Sbjct: 1 MRASTTTIGDVTDAPIGVFDSGVGGLTVARAIIDQLPHESIVYVGDTLHSPYGPKPIADV 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAA 116 ++ + + ++D L VIACNTA + + R + + + + PA + A Sbjct: 61 RRYALEVMDRLVD-DGVKLLVIACNTASAAMLRDARERYTEAYGIEVVEVIQPATRAAVR 119 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T++ + ++ T T++ + + S + + VE E+ Sbjct: 120 QTRNRRVGVIGTEGTIKSRAYEDAFAA-ASDIELFTQACPRFVEFVEAGVT----TGPEV 174 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 E + D +VL CTHYP I + + V + +++ A L Sbjct: 175 LAVAEEYLAPLKKAEIDTLVLGCTHYPHISAAIQYVMGREVTLVSSAEETAYDVYSTLVA 234 Query: 237 INTHQTRVFD-DHALFLSGKPDIAMRRLMQGF 267 + + +H +G RL F Sbjct: 235 HDLLRDPSQPANHTFEATGPDKHGFTRLASRF 266 >gi|300172982|ref|YP_003772148.1| glutamate racemase/Nucleoside-triphosphatase [Leuconostoc gasicomitatum LMG 18811] gi|299887361|emb|CBL91329.1| Glutamate racemase/Nucleoside-triphosphatase [Leuconostoc gasicomitatum LMG 18811] Length = 486 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 8/250 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 N I + DSG+GGL V+++ + +P FI++ D PYG + + + Sbjct: 2 NKNNPIGMIDSGVGGLTVIKEAQKQLPNEQFIFIGDTARMPYGPRTTDEVIAYTFQMANY 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 ++ + Q + VIACNTA L+ ++ +G + P + A T++ I I++T Sbjct: 62 LITEKQIKMLVIACNTATACALTVLQKKL-TIPVIGVIQPGAQAAQLATKNKTIGIIATD 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ IH Y + + VE K ++ + + + Sbjct: 121 GTVNSKAYELQIHQYGADTKVLSQGEPDFVQLVEAN----KYQDHATRDIVMNHLAPFKA 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDD 247 D ++L CTH+PL+ R+ + +D+ + L ++ + D+ Sbjct: 177 AGIDTLILGCTHFPLLEPFIREAVGKQITLIDSGRETIYAIKQCLNKLALNSDIKHNHDE 236 Query: 248 HALFLSGKPD 257 + + D Sbjct: 237 DIYYTTSDSD 246 >gi|324111408|gb|EGC05389.1| glutamate racemase [Escherichia fergusonii B253] Length = 285 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKNEDFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A + P+ + ++Q +G K+ Sbjct: 246 AKSADANIAFCMDMTPEAEQLLPVLQRYGFKT 277 >gi|218551040|ref|YP_002384831.1| glutamate racemase [Escherichia fergusonii ATCC 35469] gi|226722986|sp|B7LUM6|MURI_ESCF3 RecName: Full=Glutamate racemase gi|218358581|emb|CAQ91229.1| glutamate racemase [Escherichia fergusonii ATCC 35469] Length = 285 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKNEDFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F + +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A + P+ + ++Q +G K+ Sbjct: 246 AKSADANIAFCMDMTPEAEQLLPVLQRYGFKT 277 >gi|119961466|ref|YP_948293.1| glutamate racemase [Arthrobacter aurescens TC1] gi|119948325|gb|ABM07236.1| glutamate racemase [Arthrobacter aurescens TC1] Length = 373 Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 11/260 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V + + +P +YV D PYG ++ + + +++D Sbjct: 57 RPIGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDELVD 116 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L IACN+A + + R + + + + PA+++A + T+SG I ++ T Sbjct: 117 SG-VKLLTIACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVSATRSGKIGVIGTS 175 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ + + I V+ + VE ++ + Sbjct: 176 ATVGSRAYEDTFAA-APDLTITSVACPAFVNFVEAGIT----TGPDLLAAANEYLEPLKS 230 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248 D +VL CTHYPL+ V + V + +++ A+ L +T H Sbjct: 231 AGVDTVVLGCTHYPLLTGVISFVMGEDVTLVSSAEETAKDVYRALANHGIQRTEAQAPSH 290 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +G + G Sbjct: 291 EFVATGDATQFETLARRFLG 310 >gi|311743615|ref|ZP_07717421.1| glutamate racemase [Aeromicrobium marinum DSM 15272] gi|311312745|gb|EFQ82656.1| glutamate racemase [Aeromicrobium marinum DSM 15272] Length = 272 Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG GGL V + + +P +Y+ D PYG +++ + ++ Sbjct: 3 DAPIGIFDSGFGGLTVARAVLDQLPHESVLYLGDTARQPYGPLPISQVREYALDCLDHLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D + VIACN+A + + R + VPA ++A T++G + ++ T +T Sbjct: 63 D-HGVKALVIACNSASAAVLRDARERYAVPVVEVIVPATRRAVNATRNGRVGVICTQSTA 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + +H + VE G +E+ + Sbjct: 122 TSRAYDDAFAA-NPSIELHTRACPRFVEFVEAGVTGG----EELITVAREYLAPLKEAGV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250 D +VL CTHYPL+ V + V + +++ A+ LL R + + H Sbjct: 177 DTLVLGCTHYPLLTGVVSYVMGDTVTLVSSAEETAKDVFALLAREDLARGPGASAPRHRF 236 Query: 251 FLSGKPDIAMRRLMQGFG 268 +G+P + G Sbjct: 237 MTTGRPGEFGEIGRRFLG 254 >gi|256396658|ref|YP_003118222.1| glutamate racemase [Catenulispora acidiphila DSM 44928] gi|256362884|gb|ACU76381.1| glutamate racemase [Catenulispora acidiphila DSM 44928] Length = 295 Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG GGL V++ + +P Y D PYG ++ + ++ Sbjct: 15 DAPIGIFDSGFGGLTVVRALLDQLPHEAVSYFGDTARAPYGPRPIAQVRAYALECMDKLV 74 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACN+A + + R + PA++ A A T++ + ++ST +T Sbjct: 75 ESG-VKMLVIACNSASGAVLRDARERYEIPVVEVIRPAVRLAVAATRNQHVGVISTRSTR 133 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + + Q + VE +E+ K Sbjct: 134 RSMAYVDAFAA-APQIQLTTQECPRFVEFVEAGET----AGEELLKVAREYLDPVAAAGV 188 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250 D ++L CTHYPL+ V + V +++++ A+ +L + + H Sbjct: 189 DTLILGCTHYPLLTGVISYVMGEDVILINSAEETAKDVFRVLAENALMRPGDLPEPAHTF 248 Query: 251 FLSGKPDIAMRRLMQGFG 268 +G PD ++ + G Sbjct: 249 TTTGDPDQFLQIGQRFLG 266 >gi|256375157|ref|YP_003098817.1| glutamate racemase [Actinosynnema mirum DSM 43827] gi|255919460|gb|ACU34971.1| glutamate racemase [Actinosynnema mirum DSM 43827] Length = 264 Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 8/256 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I IFDSG+GGL V + + +P YV D PYG ++K + L + Sbjct: 4 ADAPIGIFDSGVGGLTVARAIMDQLPAERIRYVGDTANGPYGPLPIAQVRKHALDLADKL 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + VIACNTA + R + +PA+++A A T+SG + ++ T +T Sbjct: 64 VA-DGVKMLVIACNTASAACLRDARERYDVPVVEVVLPAVRRAVATTRSGRVGVIGTQST 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + V+ VE ++ + + Sbjct: 123 ITSGAYQDTFAA-ARDVQVTAVACPRFVDFVERG----TTSGRQVLGIAQAYLEPLQRAD 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHYPL+ V + + V + +++ + +L + + D Sbjct: 178 VDTLVLGCTHYPLLTGVVQLVMGDGVTLVSSAEETVKDVVRVLTERDQFR-EGEPDQRFT 236 Query: 252 LSGKPDIAMRRLMQGF 267 +G + RL + F Sbjct: 237 STGSVETF-ERLARRF 251 >gi|300703743|ref|YP_003745345.1| glutamate racemase [Ralstonia solanacearum CFBP2957] gi|299071406|emb|CBJ42725.1| Glutamate racemase [Ralstonia solanacearum CFBP2957] Length = 277 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 6/248 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + + Sbjct: 1 MTARAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRV 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++ VIACNTA LR ++ +G P +K A A +QS ++ +L+ Sbjct: 61 CEWLV-GQGCKALVIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T +TLR + L+ + C + L +E + + ++ Sbjct: 119 TESTLRSDKFARLLGNVSGDCQVLCQPGYGLVPLIERG----DTHSPAVLELLQAHLQPM 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D +VL CTHYP + ++++ + +D ++AR L + Sbjct: 175 LDAGADTLVLGCTHYPFLRDAIQEIAGERLALIDTGHAVARHLGRTLAAAHLQAAGAAAS 234 Query: 248 HALFLSGK 255 +G Sbjct: 235 PRFLSTGD 242 >gi|167039186|ref|YP_001662171.1| glutamate racemase [Thermoanaerobacter sp. X514] gi|300913219|ref|ZP_07130536.1| glutamate racemase [Thermoanaerobacter sp. X561] gi|307723767|ref|YP_003903518.1| glutamate racemase [Thermoanaerobacter sp. X513] gi|229486283|sp|B0K3R0|MURI_THEPX RecName: Full=Glutamate racemase gi|166853426|gb|ABY91835.1| glutamate racemase [Thermoanaerobacter sp. X514] gi|300889904|gb|EFK85049.1| glutamate racemase [Thermoanaerobacter sp. X561] gi|307580828|gb|ADN54227.1| glutamate racemase [Thermoanaerobacter sp. X513] Length = 264 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 8/255 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + + + Sbjct: 4 RPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMRE 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + VIACNT +I +S + + F + AA YT + I +++T T+ Sbjct: 64 QK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVE 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I ++ + +E+ I + K C E + K D Sbjct: 120 SKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYETASK----CLKELKEKDID 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYPL+ V ++ V +D + +A + L + + ++ F+S Sbjct: 176 TLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQIRGKAEFFVS 235 Query: 254 GKPDIAMRRLMQGFG 268 G D ++ G Sbjct: 236 GDKDNFIKTAEMLLG 250 >gi|256827100|ref|YP_003151059.1| glutamate racemase [Cryptobacterium curtum DSM 15641] gi|256583243|gb|ACU94377.1| glutamate racemase [Cryptobacterium curtum DSM 15641] Length = 264 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 6/252 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GG+ VL+ + +P +F+Y D PYG+ ++ + +L + Sbjct: 10 VGVFDSGVGGISVLRNLVRELPAENFLYYGDSAHAPYGDKTIVEVRSLSANIVETMLARG 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA + + LR +P + +G PA+K AA Q I +++T TL+ Sbjct: 70 -VKAIVIACNTATSAAAEHLRECYPGLPIIGMEPALKPAAINPQHQNILVMATTVTLKLD 128 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L H++ SQ HI + LA VE + D I+ + G+ D + Sbjct: 129 KFQQLAHTWGSQSHIIALPCPGLADLVETG----DLDSDAIRSYLAEKLAPYRGQ-VDSV 183 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYP + Q+ V D AR+ R LL + +F + Sbjct: 184 VLGCTHYPFLKRQIHQVLGAEVPLFDGGAGCARQTRRLLSETHLLVNTPQTGRVIFETSS 243 Query: 256 PDIAMRRLMQGF 267 D +L + Sbjct: 244 ADTQTLKLYERL 255 >gi|315655639|ref|ZP_07908537.1| glutamate racemase [Mobiluncus curtisii ATCC 51333] gi|315489703|gb|EFU79330.1| glutamate racemase [Mobiluncus curtisii ATCC 51333] Length = 271 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 104/264 (39%), Gaps = 14/264 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P IY+ D PYG +K+ + + ++ Sbjct: 5 NAPIGIFDSGLGGLTVARSIIDQLPGESVIYIGDTANSPYGTKPVERVKELSLSVMDKLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 D+ + VIACNTA RS + + L + PA+ +A + T++G I +++T Sbjct: 65 DRG-VKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIATH 123 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ +H+Y Q + + VE E+ Sbjct: 124 TTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSGP----ELLAVAREYLDPIRD 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR----INTHQTRV 244 D +VL CTHYPL+ V + V + +++ A R LL + + V Sbjct: 179 AGVDTLVLGCTHYPLLSGVISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGTDTV 238 Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268 + +G R + G Sbjct: 239 NPRYQFLATGDTQTFTRLARRFLG 262 >gi|152978530|ref|YP_001344159.1| glutamate racemase [Actinobacillus succinogenes 130Z] gi|150840253|gb|ABR74224.1| glutamate racemase [Actinobacillus succinogenes 130Z] Length = 264 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 136/259 (52%), Gaps = 5/259 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL FDSG+GG V +++ L+P+ H++Y D+ FPY + L +R+ + + I Sbjct: 1 MKPTILFFDSGVGGFSVYSEVKSLLPDCHYLYCFDNAFFPYSERSEETLIERVSKICTTI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +Y L VIACNTA T++ LR TF S+ +G VPAIK AA+ + + I +L+T T Sbjct: 61 DIRYPLDLIVIACNTASTVVLPSLRRTF-SIPIVGTVPAIKPAASVSHTKHIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R Y + LI Y + C + + S +L E+ G + +++KE++ K Sbjct: 120 VKREYVNTLIARYATDCRVERLGSTVLPEIAEQKIKGNSVDLLQLRKELQAWIC---LKD 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+PLI R P +LD+ +IA+R + LL + ++ + Sbjct: 177 LDTVILGCTHFPLIKEEIRICLPQVKFFLDSGYAIAKRVKSLLENSKVRSEKEKNNRIFY 236 Query: 252 LSG-KPDIAMRRLMQGFGL 269 + + ++ +G Sbjct: 237 TKDFNFEQQFYQALKRWGF 255 >gi|256002760|gb|ACU52625.1| glutamate racemase [Bacillus sp. LL3] Length = 250 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 99/238 (41%), Gaps = 7/238 (2%) Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92 +P+ + IYV D PYG + + + + +L+ + + VIACNTA + Sbjct: 1 MRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYLLENHHIKMLVIACNTATAIAL 60 Query: 93 DELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151 ++++ + +G + P + A T++ I ++ T T++ + + + Sbjct: 61 EDIQRK-TDIPVVGVIQPGARTAIKVTKNQHIGVIGTINTIKSRAYEQALLGLNADLQVE 119 Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 ++ +L VE + ++ + +E +G D ++L CTHYP++ + Sbjct: 120 NMACPLLVPFVESG----RFLQESAAEAVEASLEPLKGTAIDTLILGCTHYPILKDPIQD 175 Query: 212 LSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 V + + D AR +L +Q++ +H +G+ + + FG Sbjct: 176 YMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQFLTTGERNGFAKIAEDWFG 233 >gi|237719665|ref|ZP_04550146.1| glutamate racemase [Bacteroides sp. 2_2_4] gi|298482436|ref|ZP_07000622.1| glutamate racemase [Bacteroides sp. D22] gi|229450934|gb|EEO56725.1| glutamate racemase [Bacteroides sp. 2_2_4] gi|298271415|gb|EFI12990.1| glutamate racemase [Bacteroides sp. D22] Length = 280 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P+ LG + P ++ +++ I +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + + + + S VE + + I+K I Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYINQLLS-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D ++L CTH+P+++ RQ P + + + +A + L R + Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + Sbjct: 247 GNCQFYTTEAEEKFSE 262 >gi|117620688|ref|YP_854602.1| glutamate racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562095|gb|ABK39043.1| glutamate racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 264 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 140/262 (53%), Gaps = 9/262 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL + +++R +P +++ Y D+ FPYG + AL + L S ++ Sbjct: 2 ANILVFDSGMGGLTIYREIRRALPAHNYFYCFDNANFPYGELSEAALTEVCTRLVSHMVV 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ L VIACNTA T+ LR+ ++ +G VPAIK AAA T++G I +L+TP T+ Sbjct: 62 EHDIDLVVIACNTASTIALPSLRAAM-TVPVVGVVPAIKPAAALTRNGCIGLLATPGTVS 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT LI + + L + L E G+ + +++ + + + D Sbjct: 121 REYTHELIAQFAPGKRVLLKGATELVVEAEHKLAGLPVNMALLREVLADWL--EGEEHPD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFL 252 +VL CTH+PL+ RQL P +D+ ++A+R LL + T TR+ D + Sbjct: 179 TLVLGCTHFPLLDEEIRQLMPA-CQLVDSGSAVAKRVAHLLAGLVTTPTRLEDVGGKAYC 237 Query: 253 SGKPDIAMRRL---MQGFGLKS 271 + + D ++L +Q +GL S Sbjct: 238 T-RLDAQTQKLTAPLQAWGLSS 258 >gi|300691131|ref|YP_003752126.1| glutamate racemase [Ralstonia solanacearum PSI07] gi|299078191|emb|CBJ50834.1| Glutamate racemase [Ralstonia solanacearum PSI07] Length = 277 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 6/248 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + + Sbjct: 1 MTTRAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPQFIAERTLRV 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++ VIACNTA LR+ ++ +G P +K AAA ++S ++ +L+ Sbjct: 61 CGWLV-GQGCKALVIACNTATAQAVHLLRAQL-AVPVIGVEPGLKPAAATSRSRVVGVLA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T +TLR + L+ + C + L +E + + ++ Sbjct: 119 TESTLRSDKFARLLGNVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLQAYLQPM 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D +VL CTHYP + R+++ + +D ++AR L T Sbjct: 175 LEAGADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVARHLGRTLAAAQLQATSAAAS 234 Query: 248 HALFLSGK 255 + Sbjct: 235 PRFLSTAD 242 >gi|303236418|ref|ZP_07323007.1| glutamate racemase [Prevotella disiens FB035-09AN] gi|302483390|gb|EFL46396.1| glutamate racemase [Prevotella disiens FB035-09AN] Length = 280 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 104/263 (39%), Gaps = 14/263 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L+ +R +P+Y +IY+ D+ PYG+ + + + + Sbjct: 10 GPIGVFDSGYGGLTILKGIREQLPQYDYIYLGDNARAPYGSRSFDIVYQFTLQAVKKLFS 69 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ CNTA ++ P LG + P + T+S I IL+ Sbjct: 70 -MGCQLVILGCNTASAKALRTIQKNDLPNIDPRRRVLGVIRPTAEIVGKLTESKHIGILA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP T++ + I + + + VE + + +KK I+ + Sbjct: 129 TPGTIKSESYNMEIKKLWGNVEVTGEACPLWVPIVENNEAEGEGADYFVKKRIDHLL--Q 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245 + D ++L CTHYP+++ +Q P + + + +A + L R Sbjct: 187 TDPKIDTLILGCTHYPILLPKIKQYVPEGIRIISQGEYVASSLKDYLSRHKDMDNLCTKQ 246 Query: 246 DDHALFLSGKPDIA---MRRLMQ 265 F + D R +Q Sbjct: 247 GSVRYFTTENADKFKETARIFLQ 269 >gi|134097799|ref|YP_001103460.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338] gi|291005565|ref|ZP_06563538.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338] gi|189030368|sp|A4F910|MURI_SACEN RecName: Full=Glutamate racemase gi|133910422|emb|CAM00535.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338] Length = 271 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 101/257 (39%), Gaps = 7/257 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P YV D PYG ++ R + + ++ Sbjct: 3 HAPIGIFDSGVGGLTVARAIMDQLPGEALRYVGDTANAPYGPRPLADIRARTLAITDSLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACN+A + R + +PA+++A A T++G + ++ T AT+ Sbjct: 63 AEG-VKMLVIACNSASAACLRDARERYDVPVVEVVLPAVRRAVATTRNGRVGVIGTQATI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + A VE + ++ + + Sbjct: 122 TSRAYDDAFTA-APGVTLSTAACPRFADFVERGITSGR----QVLGLAQAYLDPLQQADV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALF 251 D +VL CTHYPL+ V + V + +++ A+ +L + H Sbjct: 177 DTLVLGCTHYPLLTGVLQLAMGDHVTLVSSAEETAKDVLRVLTEHDLLAEADGEPAHEFR 236 Query: 252 LSGKPDIAMRRLMQGFG 268 +G + + + G Sbjct: 237 ATGSGESFAKLARRFLG 253 >gi|295088107|emb|CBK69630.1| glutamate racemase [Bacteroides xylanisolvens XB1A] Length = 280 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P+ LG + P ++ +++ I +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + + + + S VE + + I+K I Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYINQLLS-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D ++L CTH+P+++ RQ P + + + +A + L R + Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + Sbjct: 247 GNCQFYTTEAEEKFSE 262 >gi|300771876|ref|ZP_07081747.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC 33861] gi|300761262|gb|EFK58087.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC 33861] Length = 275 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 103/261 (39%), Gaps = 8/261 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG GGL V ++++ +PEY +IY+ D+ PYGN + + + Sbjct: 8 NSPIGVFDSGYGGLSVFKEIKKELPEYDYIYLGDNARIPYGNRSFETVYQFTKECVFKLF 67 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 D L ++ACNTA ++ P LG + P + YT + I IL+T Sbjct: 68 D-LGCDLVILACNTASAKALRSIQQHDLPPGKKVLGVIRPTTEIIKKYTITNKIGILATT 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ I+ + + + VE + ++K+I + Sbjct: 127 GTVKSESYKIEINKFYPEIEVFQHDCPFWVPLVENNEIDTEGARYFVEKDIHELLS--QS 184 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247 D IVLACTHYPL++ V +Q P + + +A + L R Sbjct: 185 SEIDTIVLACTHYPLLLPVIKQFVPPHIQIISQGPIVAHSLKNYLERHPEVEQSCSKGST 244 Query: 248 HALFLSGKPDIAMRRLMQGFG 268 F + + FG Sbjct: 245 LQFFTTDDASGFEEKAEIFFG 265 >gi|325499291|gb|EGC97150.1| glutamate racemase [Escherichia fergusonii ECD227] Length = 262 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A + P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMDMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G K+ Sbjct: 239 EAEQLLPVLQRYGFKT 254 >gi|256821416|ref|YP_003145379.1| glutamate racemase [Kangiella koreensis DSM 16069] gi|256794955|gb|ACV25611.1| glutamate racemase [Kangiella koreensis DSM 16069] Length = 272 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 12/261 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL +L+ +R +P + +YVAD PYG L KR + + + Sbjct: 3 NAPIGVFDSGVGGLSILKSIREHLPNENLLYVADSAYAPYGRLPKDILHKRCTHIANFFV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA ++ + LRS F + + PAIK AA T++G I + +T TL Sbjct: 63 EQGAKAM-VIACNTATAVMAEWLRSEF-DIPIIAMEPAIKPAAHATRTGKIGVFATNHTL 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+ Y + + +VE + + + +E + Sbjct: 121 KSDRYKKLLTEYAKDKKVFESACDGFVEQVETG----DLSSVKAFQLVEKYLQPMIDEHI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPV------DWLDNSDSIARRARCLLPRINTHQTRVFD 246 DV+VL CTHYP + + RQ+S V + +D+++ +L N + Sbjct: 177 DVLVLGCTHYPFLAPLMRQISSQQVAGNQELQIIHTADAVSLHLTRVLAENNLLNFKDQQ 236 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 + SG D + + Q Sbjct: 237 FSRFYTSGDIDNSSKVFSQLL 257 >gi|197121115|ref|YP_002133066.1| glutamate racemase [Anaeromyxobacter sp. K] gi|220915816|ref|YP_002491120.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-1] gi|196170964|gb|ACG71937.1| glutamate racemase [Anaeromyxobacter sp. K] gi|219953670|gb|ACL64054.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-1] Length = 259 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 8/253 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+ D PYG + + + +L + Sbjct: 4 IGIFDSGVGGLTVQRAILAALPSADTVYLGDTARVPYGTKSAETVTQYSLRNA-RVLARR 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L V+ACNTA + LR+ P P + AA +++G I ++ T T+ Sbjct: 63 EIDLLVVACNTASAVALPALRAELPVPVLGVVEPGARVAAKASRTGRIGVIGTQGTVASG 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 I + + + EE ++ ++ + D + Sbjct: 123 AYQAAILRERPGAEVVARACPLFVPLAEEGWTDP--DDEVVRGVVRRYLDPLRDAAIDTL 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYPL+ + P V +D++D+IA R +P + H ++ Sbjct: 181 VLGCTHYPLLREAIARALPE-VRLVDSADAIAEEVRARIPAV----AGRSGVHRFLVTDV 235 Query: 256 PDIAMRRLMQGFG 268 P+ + + G Sbjct: 236 PERFLGVAGRFLG 248 >gi|256025994|ref|ZP_05439859.1| glutamate racemase [Escherichia sp. 4_1_40B] Length = 285 Score = 282 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTIKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P + ++Q +G ++ Sbjct: 246 AKSADANIAFCMAMTPGAEQLLPVLQRYGFET 277 >gi|171463476|ref|YP_001797589.1| glutamate racemase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193014|gb|ACB43975.1| glutamate racemase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 268 Score = 282 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 6/252 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL +L + +P++ +IY+AD PYG + R + L + + K Sbjct: 4 IGVFDSGVGGLSILDEALRQLPQHDYIYLADSANAPYGEKSSDWIATRSLGLCNYLASK- 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA ++R+ ++ +G P IK AA +Q+ ++ +L+T ATL+ Sbjct: 63 ECDAIVVACNTATAEAIKQIRAQL-AIPIIGVEPGIKPAAMQSQNHIVGVLATEATLKSD 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ + S C + L +E + + + K +E + D I Sbjct: 122 KFNALLATLPSDCQFIKQAGAGLVPLIESGNADGEDTLELLAKHLE----PIQDAGADTI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYP + R+L + +D SD++ R+ + L + L LS K Sbjct: 178 VLGCTHYPFLKKAIRKLLGESITLIDTSDAVVRQLKQQLESLKKESGNKEFGSVLLLSSK 237 Query: 256 PDIAMRRLMQGF 267 + + + Q Sbjct: 238 DESLLLLMAQDL 249 >gi|89110063|ref|AP_003843.1| glutamate racemase [Escherichia coli str. K-12 substr. W3110] gi|90111671|ref|NP_418402.2| glutamate racemase [Escherichia coli str. K-12 substr. MG1655] gi|170083436|ref|YP_001732756.1| glutamate racemase [Escherichia coli str. K-12 substr. DH10B] gi|238903032|ref|YP_002928828.1| glutamate racemase [Escherichia coli BW2952] gi|253775395|ref|YP_003038226.1| glutamate racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163917|ref|YP_003047025.1| glutamate racemase [Escherichia coli B str. REL606] gi|307140666|ref|ZP_07500022.1| glutamate racemase [Escherichia coli H736] gi|730081|sp|P22634|MURI_ECOLI RecName: Full=Glutamate racemase gi|229486276|sp|B1XBX8|MURI_ECODH RecName: Full=Glutamate racemase gi|259509813|sp|C5A0R6|MURI_ECOBW RecName: Full=Glutamate racemase gi|85676094|dbj|BAE77344.1| glutamate racemase [Escherichia coli str. K12 substr. W3110] gi|87082355|gb|AAC76949.2| glutamate racemase [Escherichia coli str. K-12 substr. MG1655] gi|169891271|gb|ACB04978.1| glutamate racemase [Escherichia coli str. K-12 substr. DH10B] gi|238861332|gb|ACR63330.1| glutamate racemase [Escherichia coli BW2952] gi|242379502|emb|CAQ34318.1| glutamate racemase [Escherichia coli BL21(DE3)] gi|253326439|gb|ACT31041.1| glutamate racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975818|gb|ACT41489.1| glutamate racemase [Escherichia coli B str. REL606] gi|253979974|gb|ACT45644.1| glutamate racemase [Escherichia coli BL21(DE3)] gi|260451197|gb|ACX41619.1| glutamate racemase [Escherichia coli DH1] gi|309704391|emb|CBJ03740.1| glutamate racemase [Escherichia coli ETEC H10407] gi|315138532|dbj|BAJ45691.1| glutamate synthase [Escherichia coli DH1] gi|323959264|gb|EGB54925.1| glutamate racemase [Escherichia coli H489] Length = 285 Score = 282 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P + ++Q +G ++ Sbjct: 246 AKSADANIAFCMAMTPGAEQLLPVLQRYGFET 277 >gi|313898081|ref|ZP_07831620.1| glutamate racemase [Clostridium sp. HGF2] gi|312957109|gb|EFR38738.1| glutamate racemase [Clostridium sp. HGF2] Length = 259 Score = 282 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 6/255 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + +I +FDSG+GG+ VL+++R LMP+ ++Y D PYG + KR + Sbjct: 1 MSSIDKAIGVFDSGLGGISVLKELRSLMPQEDYLYYGDSSFAPYGVKTKEEITKRCRSIC 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + + + VIACNTA + ELR+ +P + +G PA+K A + +L+T Sbjct: 61 AFFISQG-VKAVVIACNTATSACVKELRTLYPDLPIVGMEPALKPAVDGRHQQHVLVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL+ L+ + I+ L VE G E + + + Sbjct: 120 QFTLKEKKFEQLMSRFDEDNTIYRQPCPKLVELVE---AGRLEDEAAVNSALREYLKPYD 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFD 246 +R D IVL CTH+ R L + +D + AR + LL + Sbjct: 177 MERMDSIVLGCTHFVFYRSQLRNLIGDHIALVDGNAGTARHVQELLQERGVCRKPSSAAG 236 Query: 247 DHALFLSGKPDIAMR 261 + ++ S + ++ Sbjct: 237 EVRIYNSLNKEAILK 251 >gi|255067504|ref|ZP_05319359.1| glutamate racemase [Neisseria sicca ATCC 29256] gi|255048299|gb|EET43763.1| glutamate racemase [Neisseria sicca ATCC 29256] Length = 269 Score = 282 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A QAA T + I I++T T Sbjct: 66 E-NDVKALVIACNTIAAVAGQKIRQKAGNMPVLDVISAGAQAALNTTSNNKIGIIATNTT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH+ + ++ +L VEE ++ +++ ++ ++ Sbjct: 125 VNSNAYARAIHAQNPDTLVRTQATPLLVPLVEEGWLDHEVTRLTVREYLKPLLVD----D 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A L + T D+ Sbjct: 181 IDTLVLGCTHFPLLKPLIGKEA-QNVALVDSAITTAEATAQALAQAGLLNTENDSPDYRF 239 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 240 YVSDIPLRFRTIGERFLG 257 >gi|325203563|gb|ADY99016.1| glutamate racemase [Neisseria meningitidis M01-240355] Length = 270 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL + + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVCALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 241 YVSDIPLKFRTIGERFLG 258 >gi|326390909|ref|ZP_08212460.1| glutamate racemase [Thermoanaerobacter ethanolicus JW 200] gi|325993057|gb|EGD51498.1| glutamate racemase [Thermoanaerobacter ethanolicus JW 200] Length = 264 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 16/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D+ P I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK Sbjct: 1 MDSRP--------IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + + ++ VIACNT +I +S + + F + AA YT + Sbjct: 53 FAKQILNFMREQK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKK 108 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I ++T T+ I ++ + +E+ I + K Sbjct: 109 IGAIATTRTVESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYETANK---- 164 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 C E + K D +VL CTHYPL+ V ++ V +D + +A + L + + Sbjct: 165 CLKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNP 224 Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFG 268 ++ F+SG D ++ G Sbjct: 225 QIRGKAEFFVSGDKDNFIKTAEMLLG 250 >gi|262273148|ref|ZP_06050964.1| glutamate racemase [Grimontia hollisae CIP 101886] gi|262222726|gb|EEY74035.1| glutamate racemase [Grimontia hollisae CIP 101886] Length = 263 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 134/261 (51%), Gaps = 9/261 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 S+LIFDSG+GGL V +++ L+PE H +Y D+ FPYG D L +R+ + + + Sbjct: 2 KSVLIFDSGVGGLSVYKEIAQLLPEQHIVYAFDNAAFPYGELADDILIQRVCGMVASLCH 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA TL+ LRS S+ +G VPAIK AAA +++ I +L+TPAT+ Sbjct: 62 ELDIALVVIACNTASTLVLPHLRSLL-SIPVVGVVPAIKPAAAMSKTKHIGLLATPATVN 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 RTYT L+ + CH+ +V S L E GI + + +K+ + +TD Sbjct: 121 RTYTKQLVEEFAPDCHVEMVGSTELVQMGEGKLRGIPVDKKILKQVLMPFI-----NKTD 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTH+PL+ ++ +D+ +IA R LL T D L S Sbjct: 176 CIVLGCTHFPLLRDEIEEILGDQCLVIDSGKAIANRVDTLLKERGALSTSFRDKKHLAFS 235 Query: 254 GKP---DIAMRRLMQGFGLKS 271 P + A+ + G + Sbjct: 236 SAPVKDEEALNNELGKLGFSA 256 >gi|29349130|ref|NP_812633.1| glutamate racemase [Bacteroides thetaiotaomicron VPI-5482] gi|29341037|gb|AAO78827.1| glutamate racemase [Bacteroides thetaiotaomicron VPI-5482] Length = 280 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R +PEY ++Y+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILNKIREALPEYDYVYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P LG + P ++ TQS I +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGGITQSRHIGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + ++ + VE + + I+K I+ Sbjct: 129 TAGTIKSESYPLEIHKLFPDIQVSGMACPMWVPLVENNESQNEGADYFIRKYIDQLLS-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + D ++L CTHYP+++ ++ +P + + + +A + L R + Sbjct: 187 KDPEIDTMILGCTHYPILLPKIQEYTPKHIRIVAQGEYVAESLKDYLSRHPEMNAKCTQN 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + Sbjct: 247 GSCLFYTTEAEEKFVE 262 >gi|251793125|ref|YP_003007853.1| glutamate racemase [Aggregatibacter aphrophilus NJ8700] gi|247534520|gb|ACS97766.1| glutamate racemase [Aggregatibacter aphrophilus NJ8700] Length = 300 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 135/262 (51%), Gaps = 9/262 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ++L FDSG+GGL V Q+++ L+P+ H++Y D+ FPY + + +R + + I Sbjct: 5 PKPTLLFFDSGVGGLSVYQEVQKLLPDCHYLYCFDNAFFPYSEKPEEGIVERTLKICQCI 64 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y L VIACNTA T++ LR F S+ +G VPAIK AA TQ+ I +L+T T Sbjct: 65 DNMYPLDLIVIACNTASTVVLPVLRKHF-SIPIVGTVPAIKPAAEQTQTKHIGLLATKGT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R Y S+LI Y S C + + S L E G I +EIK E+ + Sbjct: 124 VKRQYLSDLIDKYASFCQVEKIGSTKLVELAEHKLHGYPIDLNEIKVELSEW---ENIPD 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV+VL CTH+PLI +Q P ++D+ +IA+R + LL + + Sbjct: 181 LDVVVLGCTHFPLIKSEIQQCLPQVKYFIDSGVAIAKRVKSLLKEVKVRLKNQMNSQVFC 240 Query: 252 LSGKPDIAMRRLMQG---FGLK 270 KP + L+Q G + Sbjct: 241 T--KPLVKEDSLLQRIHSLGFE 260 >gi|59801838|ref|YP_208550.1| glutamate racemase [Neisseria gonorrhoeae FA 1090] gi|239999567|ref|ZP_04719491.1| glutamate racemase [Neisseria gonorrhoeae 35/02] gi|240014744|ref|ZP_04721657.1| glutamate racemase [Neisseria gonorrhoeae DGI18] gi|240017192|ref|ZP_04723732.1| glutamate racemase [Neisseria gonorrhoeae FA6140] gi|240081170|ref|ZP_04725713.1| glutamate racemase [Neisseria gonorrhoeae FA19] gi|240113384|ref|ZP_04727874.1| glutamate racemase [Neisseria gonorrhoeae MS11] gi|240116270|ref|ZP_04730332.1| glutamate racemase [Neisseria gonorrhoeae PID18] gi|240118556|ref|ZP_04732618.1| glutamate racemase [Neisseria gonorrhoeae PID1] gi|240121267|ref|ZP_04734229.1| glutamate racemase [Neisseria gonorrhoeae PID24-1] gi|240124100|ref|ZP_04737056.1| glutamate racemase [Neisseria gonorrhoeae PID332] gi|240126283|ref|ZP_04739169.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679] gi|254494283|ref|ZP_05107454.1| glutamate racemase [Neisseria gonorrhoeae 1291] gi|260439916|ref|ZP_05793732.1| glutamate racemase [Neisseria gonorrhoeae DGI2] gi|268595380|ref|ZP_06129547.1| glutamate racemase [Neisseria gonorrhoeae 35/02] gi|268597280|ref|ZP_06131447.1| glutamate racemase [Neisseria gonorrhoeae FA19] gi|268599457|ref|ZP_06133624.1| glutamate racemase [Neisseria gonorrhoeae MS11] gi|268601935|ref|ZP_06136102.1| glutamate racemase [Neisseria gonorrhoeae PID18] gi|268604265|ref|ZP_06138432.1| glutamate racemase [Neisseria gonorrhoeae PID1] gi|268682724|ref|ZP_06149586.1| glutamate racemase [Neisseria gonorrhoeae PID332] gi|268684866|ref|ZP_06151728.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679] gi|75432415|sp|Q5F6P9|MURI_NEIG1 RecName: Full=Glutamate racemase gi|59718733|gb|AAW90138.1| putative glutamate racemase [Neisseria gonorrhoeae FA 1090] gi|226513323|gb|EEH62668.1| glutamate racemase [Neisseria gonorrhoeae 1291] gi|268548769|gb|EEZ44187.1| glutamate racemase [Neisseria gonorrhoeae 35/02] gi|268551068|gb|EEZ46087.1| glutamate racemase [Neisseria gonorrhoeae FA19] gi|268583588|gb|EEZ48264.1| glutamate racemase [Neisseria gonorrhoeae MS11] gi|268586066|gb|EEZ50742.1| glutamate racemase [Neisseria gonorrhoeae PID18] gi|268588396|gb|EEZ53072.1| glutamate racemase [Neisseria gonorrhoeae PID1] gi|268623008|gb|EEZ55408.1| glutamate racemase [Neisseria gonorrhoeae PID332] gi|268625150|gb|EEZ57550.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679] Length = 270 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 -GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 240 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 241 YVSDIPLKFRTIGERFLG 258 >gi|114561314|ref|YP_748827.1| glutamate racemase [Shewanella frigidimarina NCIMB 400] gi|122301132|sp|Q089S6|MURI_SHEFN RecName: Full=Glutamate racemase gi|114332607|gb|ABI69989.1| glutamate racemase [Shewanella frigidimarina NCIMB 400] Length = 259 Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 9/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL V+ ++R +P + + Y+ D+ PYGN + L + L + Sbjct: 1 MSGPILVFDSGIGGLSVMNEIRKQLPLHDYCYLFDNARLPYGNLSEQELITGCVALITHH 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + V+ACNTA TL+ LR ++ +G VPAIK AA ++ I +L+TP T Sbjct: 61 ARRLNASIVVVACNTASTLVLPLLRQQL-TIPIVGVVPAIKPAAMLSKKKHIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI+ + C + L + L E+Y +I D++ + Sbjct: 120 VKRDYTQALINQFAGNCKVELFGTSDLVLLAEQYVAQQQIDMDKLNEI----LAPIAASN 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV+VL CTH+P+I V LD+ +++A+R R LL + ++ Sbjct: 176 IDVLVLGCTHFPMIATEISHYLGEGVTLLDSGEAVAKRVRFLLSK----ESNSNKQLQAC 231 Query: 252 LSGKPDIAMRRLMQGFGLK 270 + ++ + +G Sbjct: 232 YTKDIGQGLKAALVDYGFS 250 >gi|218692257|ref|YP_002400469.1| glutamate racemase [Escherichia coli ED1a] gi|29839540|sp|Q8FB89|MURI_ECOL6 RecName: Full=Glutamate racemase gi|254766115|sp|B7MR95|MURI_ECO81 RecName: Full=Glutamate racemase gi|218429821|emb|CAR10783.2| glutamate racemase [Escherichia coli ED1a] Length = 285 Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NIPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ + Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 KE D +VL CTH+PL+ Q+ P +D+ +IARR LL Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245 Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277 >gi|317486144|ref|ZP_07944988.1| Asp/Glu/Hydantoin racemase [Bilophila wadsworthia 3_1_6] gi|316922593|gb|EFV43835.1| Asp/Glu/Hydantoin racemase [Bilophila wadsworthia 3_1_6] Length = 296 Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 6/252 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL MR LMP ++++ D PYG + + + + ++ Sbjct: 10 QLPIGLFDSGVGGLTVLDAMRRLMPGEDYLFLGDTARVPYGAKSQKTIVRYSLQAAAKLI 69 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + L VIACNTA LR T+P M +G + P + A + SG I++++T +T Sbjct: 70 GQR-IKLLVIACNTATAAALPALRETWPDMPIIGVIEPGSRAACEASPSGDIAVIATEST 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + I + + ++ + EE I E + + +E F ++ Sbjct: 129 IRSGAYAEAILRRRPEAQVRSLACPLFVPLAEEGWFDGPIAEGVVSRYLEPLF--EKSPA 186 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHA 249 D +VL CTHYP++ R++ V +D++ + A + L + Sbjct: 187 PDCLVLGCTHYPMLAAAIRKVVGPEVHIVDSAATTAEVVKRRLADKGLAHPQAGRTGRIR 246 Query: 250 LFLSGKPDIAMR 261 F++ P R Sbjct: 247 FFITDDPQRFTR 258 >gi|17546675|ref|NP_520077.1| glutamate racemase [Ralstonia solanacearum GMI1000] gi|20177976|sp|Q8XY07|MURI_RALSO RecName: Full=Glutamate racemase gi|17428974|emb|CAD15658.1| probable glutamate racemase protein [Ralstonia solanacearum GMI1000] Length = 277 Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 6/248 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + + Sbjct: 1 MTTRAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAGRTLRV 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++ VIACNTA LR ++ +G P +K A A ++S ++ +L+ Sbjct: 61 CEWLV-GQGCKALVIACNTATAQAVHLLREQL-AVPVIGVEPGLKPAVATSRSRVVGVLA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T +TLR + L+ + C + L +E + + + + Sbjct: 119 TESTLRSDKFARLLGNVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLRAYLLPM 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D +VL CTHYP + R+++ + +D ++AR L + T Sbjct: 175 LEAGADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVARHLGRTLAAAHLQATGAAAS 234 Query: 248 HALFLSGK 255 + Sbjct: 235 PRFLSTAD 242 >gi|167628589|ref|YP_001679088.1| glutamate racemase, putative [Heliobacterium modesticaldum Ice1] gi|167591329|gb|ABZ83077.1| glutamate racemase, putative [Heliobacterium modesticaldum Ice1] Length = 284 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 8/260 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V +++ MP +Y AD PYG L + + + ++ Sbjct: 5 QPIGIFDSGVGGLTVAREVFRQMPGEEILYFADTAHVPYGPRPASELIRFALEITDFLVA 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L ++ACNT+ +L D +R P ++A +++G I +L+T AT+R Sbjct: 65 EGA-KLILVACNTSSSLALDIIRERHKVPVVGVVDPGAEEAVRLSRNGRIGVLATEATIR 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + S + S + + VE + DE + + D Sbjct: 124 KGAHSRRVGELNSAMQVFGQACPRFVPLVESG----RYSGDEARAASKQYLAPLIEAGVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INTHQTR-VFDDHAL 250 IVL CTHYP + V R++ + +D + + + L+ R I R H Sbjct: 180 TIVLGCTHYPFLEPVIREVIGEKITLIDPACQTVAQGKALMERGIIPFRDPRGPKPRHRF 239 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 ++SG P R G+ Sbjct: 240 YVSGDPVSFARVGGALLGVP 259 >gi|219871943|ref|YP_002476318.1| glutamate racemase [Haemophilus parasuis SH0165] gi|254766116|sp|B8F7R8|MURI_HAEPS RecName: Full=Glutamate racemase gi|219692147|gb|ACL33370.1| glutamate racemase [Haemophilus parasuis SH0165] Length = 267 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 6/261 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL + +R +P+ H++Y D+ FPY + L + + + I Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRENLPDAHYLYCFDNAYFPYSEKSEAVLIELAVGIVQKI 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + Y + V+ACNTA T++ LR F +M +G VPAIK AA +Q+ I +L+T T Sbjct: 61 AENYPLDMVVVACNTASTVVLPALRERF-AMPIVGTVPAIKPAAQISQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y LI Y C + + S L VEE + ++K +E + Sbjct: 120 VTRPYVDELIERYAKDCVVERIGSTDLVEIVEEKQQTGSVDMRRLQKVVEEW---QSHPT 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F Sbjct: 177 LDTVILGCTHFPLVKEELQQLLPRVSFFVDPGNGIANRVVSLLQDVKRNVNNENKENQAF 236 Query: 252 LSGKPDIAMRR--LMQGFGLK 270 + + ++R +MQ +G K Sbjct: 237 CTQNSENFLKREKVMQNWGFK 257 >gi|305664609|ref|YP_003860896.1| glutamate racemase [Maribacter sp. HTCC2170] gi|88708626|gb|EAR00862.1| glutamate racemase [Maribacter sp. HTCC2170] Length = 262 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 7/241 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GG + +++ +P + +Y AD PYG + + + +++L Sbjct: 5 PIGIFDSGVGGTSIWKEINVQLPNENTVYFADSENAPYGEKSSEEIIQLSVKN-TELLLG 63 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA T D LR + + F+G PAIK AA ++S + +L+T TL Sbjct: 64 KGCKLIVVACNTATTNAIDHLRKNY-DVPFIGIEPAIKPAALQSKSKTVGVLATKGTLTS 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + ++ + + L +EE KI E ++ + K D Sbjct: 123 SLFHSTSENHTNGITVIEQVGKGLVPLIEEG----KINSKETRELLFSYIGPMLEKGIDY 178 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLS 253 +VL CTHYP ++ V L P V +D+ +++AR+AR +L + T+ + H + + Sbjct: 179 LVLGCTHYPYLIPVLNDLIPDHVKIIDSGEAVARQARAVLEQKKITNSSHNTAYHKFYTN 238 Query: 254 G 254 Sbjct: 239 A 239 >gi|240128767|ref|ZP_04741428.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035] gi|268687151|ref|ZP_06154013.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035] gi|268627435|gb|EEZ59835.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035] Length = 270 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 -GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D++ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLGTGNNNPDYRF 240 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 241 YVSDIPLKFRTIGERFLG 258 >gi|299066438|emb|CBJ37623.1| Glutamate racemase [Ralstonia solanacearum CMR15] Length = 277 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 6/248 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + + Sbjct: 1 MTARAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAGRTLRV 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++ + L VIACNTA LR ++ +G P +K A A ++S ++ +L+ Sbjct: 61 CEWLVGQGCKAL-VIACNTATAQAVHLLREQL-AVPVIGVEPGLKPAVATSRSRVVGVLA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T +TLR + L+ + C + L +E + + + + Sbjct: 119 TESTLRSDKFARLLGTVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLRAYLLPM 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D +VL CTHYP + R+++ + +D ++AR L + T Sbjct: 175 LEAGADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVARHLGRTLAAAHLQATGAAAS 234 Query: 248 HALFLSGK 255 + Sbjct: 235 PRFLSTAD 242 >gi|60680023|ref|YP_210167.1| putative glutamate racemase [Bacteroides fragilis NCTC 9343] gi|265765173|ref|ZP_06093448.1| glutamate racemase [Bacteroides sp. 2_1_16] gi|60491457|emb|CAH06207.1| putative glutamate racemase [Bacteroides fragilis NCTC 9343] gi|263254557|gb|EEZ25991.1| glutamate racemase [Bacteroides sp. 2_1_16] Length = 280 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L + P LG + P + + TQ+ + IL+ Sbjct: 70 -MGCHLVILACNTASAKALRTIQMNDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ +H + + + VE + + I+K I+ Sbjct: 129 TAGTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEANGEGADFFIRKYIDNLLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + ++ D +VL CTHYP+++ ++ P V + + +A + L R + Sbjct: 187 KDRQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHRHPEMDMKCTRE 246 Query: 246 DDHALFLSGKPDIAMR 261 + + D + Sbjct: 247 GKCRFYTTEAEDKFIE 262 >gi|157147233|ref|YP_001454552.1| glutamate racemase [Citrobacter koseri ATCC BAA-895] gi|157084438|gb|ABV14116.1| hypothetical protein CKO_03024 [Citrobacter koseri ATCC BAA-895] Length = 260 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 137/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPNLHYIYAFDNVAFPYGEKSEAFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Y Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S L E G + +E+++ + E D +V Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGEPVSLEELRRILRPWLRMPEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSAEANIAFCMAMTP 238 Query: 257 DI-AMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 ETEQLIPVLQRYGFET 254 >gi|86157092|ref|YP_463877.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773603|gb|ABC80440.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-C] Length = 259 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 10/254 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+ D PYG + + + +L + Sbjct: 4 IGIFDSGVGGLTVQRAILAALPSADTVYLGDTARVPYGTKSAETVTQYSLRNA-RVLARR 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 + L V+ACNTA + LR+ S+ LG V P + AA +++G I ++ T T+ Sbjct: 63 EIDLLVVACNTASAVALPALRAEL-SVPVLGVVDPGARVAAKASRTGRIGVIGTQGTVAS 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I + + + EE ++ ++ + G D Sbjct: 122 GAYQEAIRRERPGAEVVARACPLFVPLAEEGWTDP--DDEVVRGIVRRYLDPLRGAAIDT 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHYPL+ + P V +D++++IA R +P H ++ Sbjct: 180 LVLGCTHYPLLRAAIARELPE-VRLVDSAEAIAEEVRARIP----AAPGRTGVHRFLVTD 234 Query: 255 KPDIAMRRLMQGFG 268 P+ + + G Sbjct: 235 VPERFLAVAGRFLG 248 >gi|191169526|ref|ZP_03031256.1| glutamate racemase [Escherichia coli B7A] gi|193063978|ref|ZP_03045064.1| glutamate racemase [Escherichia coli E22] gi|193067960|ref|ZP_03048925.1| glutamate racemase [Escherichia coli E110019] gi|194429405|ref|ZP_03061929.1| glutamate racemase [Escherichia coli B171] gi|194433275|ref|ZP_03065556.1| glutamate racemase [Shigella dysenteriae 1012] gi|300902584|ref|ZP_07120560.1| hypothetical protein HMPREF9536_00757 [Escherichia coli MS 84-1] gi|300926197|ref|ZP_07142003.1| hypothetical protein HMPREF9548_04219 [Escherichia coli MS 182-1] gi|301324906|ref|ZP_07218467.1| hypothetical protein HMPREF9535_00045 [Escherichia coli MS 78-1] gi|309797134|ref|ZP_07691531.1| hypothetical protein HMPREF9348_04371 [Escherichia coli MS 145-7] gi|190900431|gb|EDV60250.1| glutamate racemase [Escherichia coli B7A] gi|192929443|gb|EDV83051.1| glutamate racemase [Escherichia coli E22] gi|192958580|gb|EDV89018.1| glutamate racemase [Escherichia coli E110019] gi|194412552|gb|EDX28850.1| glutamate racemase [Escherichia coli B171] gi|194418559|gb|EDX34647.1| glutamate racemase [Shigella dysenteriae 1012] gi|300405344|gb|EFJ88882.1| hypothetical protein HMPREF9536_00757 [Escherichia coli MS 84-1] gi|300417762|gb|EFK01073.1| hypothetical protein HMPREF9548_04219 [Escherichia coli MS 182-1] gi|300848190|gb|EFK75950.1| hypothetical protein HMPREF9535_00045 [Escherichia coli MS 78-1] gi|308119213|gb|EFO56475.1| hypothetical protein HMPREF9348_04371 [Escherichia coli MS 145-7] gi|320180303|gb|EFW55235.1| Glutamate racemase [Shigella boydii ATCC 9905] gi|320201538|gb|EFW76116.1| Glutamate racemase [Escherichia coli EC4100B] gi|323155494|gb|EFZ41673.1| glutamate racemase [Escherichia coli EPECa14] gi|323161254|gb|EFZ47167.1| glutamate racemase [Escherichia coli E128010] gi|323177993|gb|EFZ63577.1| glutamate racemase [Escherichia coli 1180] gi|323182072|gb|EFZ67482.1| glutamate racemase [Escherichia coli 1357] gi|324019672|gb|EGB88891.1| hypothetical protein HMPREF9542_01635 [Escherichia coli MS 117-3] gi|332083985|gb|EGI89194.1| glutamate racemase [Shigella boydii 5216-82] gi|332085315|gb|EGI90489.1| glutamate racemase [Shigella dysenteriae 155-74] Length = 262 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 EAEQLLPVLQRYGFET 254 >gi|327250613|gb|EGE62321.1| glutamate racemase [Escherichia coli STEC_7v] Length = 262 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 EAEQLLPVLQRYGFET 254 >gi|262370036|ref|ZP_06063363.1| glutamate racemase [Acinetobacter johnsonii SH046] gi|262315075|gb|EEY96115.1| glutamate racemase [Acinetobacter johnsonii SH046] Length = 289 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 12/268 (4%) Query: 7 PCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K I IFDSGIGGL + Q++ +P FIY AD PYG +D +++ Sbjct: 13 PMPKATANAPIGIFDSGIGGLSIAQEIAKHLPHERFIYFADTAHVPYGPRDDQNIRELTA 72 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124 + L + ++V+ACNTA D LR + +G VPA+K A ++S ++ Sbjct: 73 QAI-EWLYRQGCKVAVVACNTASAFSLDYLREHYGDNFPIIGLVPALKPAVLQSKSKTVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+TPAT R +++ + S + V+ + L VE A ++ Sbjct: 132 VLATPATFRGQLIKDVVDKFAQPSGVTVIPVTCLDLVPFVESGAQ----MSAACLATLKD 187 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYP + + + + +D+ ++AR+ +L + Sbjct: 188 ILQPVVDQGADYLVLGCTHYPFLKIAIQSIFGQKLTLIDSGLAVARQTARILIKNELLFE 247 Query: 243 RVFDD---HALFLSGKPDIAMRRLMQGF 267 + D ++SG ++R ++Q Sbjct: 248 QNHDGDVRIECYVSGNNAESLRPILQLL 275 >gi|241759734|ref|ZP_04757834.1| glutamate racemase [Neisseria flavescens SK114] gi|241319742|gb|EER56138.1| glutamate racemase [Neisseria flavescens SK114] Length = 269 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 8/263 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + Sbjct: 1 MSTSKQRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126 +L+ VIACNT + ++ +M L + A + A T++ I I+ Sbjct: 61 VDFLLE-NDVKALVIACNTIAAVAGQKILQKAGNMPVLDVISAGAEAALQTTKNNRIGII 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ + IHS + + ++ +L VEE ++ +++ ++ + Sbjct: 120 ATNTTVNSNAYARAIHSKNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLAD 179 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-F 245 D +VL CTH+PL+ + + V +D++ + A L + T Sbjct: 180 ----DIDTLVLGCTHFPLLKPLISHEA-QNVTLVDSAITTAEATAKALAQAGLLNTENDN 234 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 D+ ++S P + G Sbjct: 235 PDYRFYVSDIPLRFRTIGERFLG 257 >gi|269218711|ref|ZP_06162565.1| glutamate racemase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211822|gb|EEZ78162.1| glutamate racemase [Actinomyces sp. oral taxon 848 str. F0332] Length = 275 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 11/260 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V + + PE Y+ D PYG +++ + + ++D Sbjct: 4 RPIGIFDSGVGGLTVARAIIDQFPEESITYIGDTAHTPYGPKPIAQVRELALDIMDSLVD 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 + VIACN+A + + R + S+ + + PA+++A + T++ I ++ T Sbjct: 64 SG-VKMLVIACNSASAAVLHDARERYQAARSIPVVEVIQPAVRRAVSATRNRRIGVIGTE 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ + + + + VE ++++ E Sbjct: 123 ATIGSGAYEDAFAA-APHLTLTTAACPEFVELVEAGITAGP----QVEEVAERYLAPVRD 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDH 248 D +VL CTHYPL+ V + ++D AR L + D Sbjct: 178 AGVDTLVLGCTHYPLLAGAIGYTMGESVTLVSSADETARDVYAKLASRDLFAPPGNEPDR 237 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 + +G P + G Sbjct: 238 RFYATGDPARFGELAGRFLG 257 >gi|91791601|ref|YP_561252.1| glutamate racemase [Shewanella denitrificans OS217] gi|123357218|sp|Q12SP7|MURI_SHEDO RecName: Full=Glutamate racemase gi|91713603|gb|ABE53529.1| glutamate racemase [Shewanella denitrificans OS217] Length = 277 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 5/224 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R +P ++ Y+ D+ PYG+ + L + + L Sbjct: 1 MSGPILVFDSGIGGLSVLAEIRKRLPAENYCYLFDNARLPYGDLSESELIRGCVELICQQ 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + + + V+ACNTA TL+ LR ++ +G VPAIK AA ++ I +L+TP T Sbjct: 61 VQQVEAKIVVVACNTASTLVLPVLRQRL-TIPVVGVVPAIKPAALLSKRKHIGVLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI + C + L S L E+ A + + ++ K + + Sbjct: 120 VSRDYTHGLISQFAEDCQVDLFGSSELVMLAEQKAAKLPVNNQQLAKI----LAPIKASK 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 DV+VL CTH+P+I Q V LD+ ++IA R LL Sbjct: 176 LDVLVLGCTHFPMIKEELSQYLGESVLLLDSGEAIANRVASLLE 219 >gi|221214852|ref|ZP_03587821.1| glutamate racemase [Burkholderia multivorans CGD1] gi|221165391|gb|EED97868.1| glutamate racemase [Burkholderia multivorans CGD1] Length = 292 Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 8/243 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++ Sbjct: 22 PIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQ 81 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR Sbjct: 82 RAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRS 139 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ + + C L VE G ++ ++G D Sbjct: 140 ARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADT 195 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LFL 252 IVL CTHYP + R L + +D SD+IAR+ +L + A Sbjct: 196 IVLGCTHYPFLTPAIRSLIGERMTIVDTSDAIARQLARVLEQHGLRTPAGVPAAAPRFCS 255 Query: 253 SGK 255 +G Sbjct: 256 TGD 258 >gi|116611238|gb|ABK03962.1| glutamate racemase [Arthrobacter sp. FB24] Length = 312 Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 11/261 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P +YV D PYG ++ + + +++ Sbjct: 3 SRPIGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDELV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILST 128 D L IACN+A + + R + + + + PA+++A A T+SG + ++ T Sbjct: 63 DSG-VKLLTIACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVAATRSGRVGVIGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + + HI V+ S VE E+ Sbjct: 122 SATIGSRAYEDTFAA-APDLHITSVACPAFVSYVEAGIT----TGPELLAVAREYLEPLR 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247 D +VL CTHYPL+ V + V + +++ A+ L + +T + Sbjct: 177 TAGVDTVVLGCTHYPLLTGVISYVMGEDVTLVSSAEETAKDVYRALVSHDLQRTLEAPPE 236 Query: 248 HALFLSGKPDIAMRRLMQGFG 268 H +G+ + G Sbjct: 237 HHFIATGEAGQFETLARRFLG 257 >gi|257069150|ref|YP_003155405.1| glutamate racemase [Brachybacterium faecium DSM 4810] gi|256559968|gb|ACU85815.1| glutamate racemase [Brachybacterium faecium DSM 4810] Length = 270 Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 101/261 (38%), Gaps = 12/261 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P+ +Y+ D PYG ++ + + +++ Sbjct: 3 NAPIGIFDSGVGGLTVARAVLDQLPQEELVYIGDTAHGPYGPRPIAEVRSLALEIMDELV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNTA + + R + PA+++A A T++ + +++T T+ Sbjct: 63 -GHGVKMLVIACNTASAAVLRDARERYDVPVIEVIQPAVRRAVAATRNRRVGVIATEGTV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + VE + E+ + E Sbjct: 122 TSRAYEDAFAA-APDLTLTAQACPRFVEFVENGV----VSGREVVEMAEEYLAPVREAEV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL- 250 D +VL CTHYP++ + V + +++ A L +T+ H Sbjct: 177 DTLVLGCTHYPMLAGPISYVMGPDVTLVSSAEETALDVYSQLQATEQLRETQRPPRHVFS 236 Query: 251 ---FLSGKPDIAMRRLMQGFG 268 F +G + R + G Sbjct: 237 QTAFGTGS-ENFARLSRRFLG 256 >gi|224367637|ref|YP_002601800.1| MurI [Desulfobacterium autotrophicum HRM2] gi|223690353|gb|ACN13636.1| MurI [Desulfobacterium autotrophicum HRM2] Length = 283 Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 7/247 (2%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + + +FDSG+GG+ VL+ +R L+P+ IYVAD PYGN ++ R + Sbjct: 17 RSNDAPLGVFDSGVGGVSVLKWIRQLLPQEDLIYVADKGYAPYGNKSSDYVRDRAAHITR 76 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L+K V+ACNTA LRS F + F+G P ++ A T+SG+I +L+T Sbjct: 77 FLLEKR-VKAVVVACNTATVTAITTLRSMFK-VPFIGIEPGVRPALNATRSGVIGVLATT 134 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TLR T + LI + + + L +VE + E +K +E + Sbjct: 135 ETLRSTSFNALIQRFCKDIRVEVQECPGLMEQVES----MAFTTPETRKLLERYLVPLLE 190 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-H 248 K D IVL CTHYP +V + R+++ + ++ ++++R+ +L ++ TR Sbjct: 191 KGADTIVLGCTHYPFLVPLVREMAGQEIRIIETGEAVSRQVMRILTTMDLLTTRTEPGST 250 Query: 249 ALFLSGK 255 + + SG Sbjct: 251 SFWTSGD 257 >gi|325963803|ref|YP_004241709.1| glutamate racemase [Arthrobacter phenanthrenivorans Sphe3] gi|323469890|gb|ADX73575.1| glutamate racemase [Arthrobacter phenanthrenivorans Sphe3] Length = 332 Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 11/261 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V + + +P +YV D PYG ++ + + +++ Sbjct: 23 SRPIGVFDSGVGGLTVARSIIDQLPNESILYVGDTAHGPYGPLPIAEVRANALGVMDELV 82 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILST 128 D L IACN+A + + R + + + + PA+++A A T+SG + ++ T Sbjct: 83 DSG-VKLLTIACNSASAAVLRDARERYTAKYGIPVIEVIQPAVRRAVAATRSGRVGVIGT 141 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + + I V+ S VE + E + Sbjct: 142 SATIGSRAYEDTFAA-APDLAITSVACPEFVSYVEAGIT----TGPALLAVAEEYLAPLK 196 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247 D +VL CTHYPL+ V + V + +++ A+ L + +T + Sbjct: 197 AAGVDTVVLGCTHYPLLTGVISYVMGADVTLVSSAEETAKDVYRALATHDLQRTDDAPPE 256 Query: 248 HALFLSGKPDIAMRRLMQGFG 268 H +G + G Sbjct: 257 HHFVATGDAGQFEALARRFLG 277 >gi|209884599|ref|YP_002288456.1| glutamate racemase [Oligotropha carboxidovorans OM5] gi|209872795|gb|ACI92591.1| glutamate racemase [Oligotropha carboxidovorans OM5] Length = 264 Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 102/248 (41%), Positives = 151/248 (60%), Gaps = 6/248 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL VL+++ P+ + YVADD FPYG E+ + R++ L D++D Sbjct: 5 RAILVFDSGLGGLTVLREIAAARPDAAYTYVADDAFFPYGQHEEDEIIARVVPLIGDLID 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +++P L VIACNTA TL+ D LR + S+ F+G VPAIK A A +++ +S+L T T++ Sbjct: 65 RHRPDLVVIACNTASTLVMDHLRKAY-SVPFVGTVPAIKPACAASKTKKVSVLGTRGTVK 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT LI ++ C + LV + LAS E G I +D ++ EI CF+E + RTD Sbjct: 124 REYTRTLIRNFAQGCDVTLVGAENLASLAERALRGEAISDDAVRAEIAACFVE-DSPRTD 182 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL-FL 252 +VLACTHYPL++ ++++PWPV W+D + +IARR L+ R F Sbjct: 183 TVVLACTHYPLLLEQIQRIAPWPVAWIDPAPAIARRVVSLI---GPQADRSAAPAKFLFT 239 Query: 253 SGKPDIAM 260 SG+ A Sbjct: 240 SGRAPTAT 247 >gi|262375099|ref|ZP_06068333.1| glutamate racemase [Acinetobacter lwoffii SH145] gi|262310112|gb|EEY91241.1| glutamate racemase [Acinetobacter lwoffii SH145] Length = 290 Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 11/262 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I IFDSG+GGL V ++ +P F+Y AD PYG +D ++ + Sbjct: 19 ADAPIGIFDSGVGGLSVALEIARHLPNERFVYYADTAHVPYGPRDDQEIRALTAQAI-EW 77 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L + ++V+ACNTA D LR + + +G VPA+K A TQS +++L+TPA Sbjct: 78 LYRQGCKVAVVACNTASAFSLDYLRDYYGENFPIIGLVPALKPAVLNTQSKTVAVLATPA 137 Query: 131 TLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T R ++I + +Q + V+S+ L VE + ++ Sbjct: 138 TFRGQLIKDVISRFAEPAQVKVLPVTSLDLVPFVEAGEQ----MSAACLQTLKEILQPVV 193 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVF 245 + D +VL CTHYP + + + + +D+ ++AR+ +L + H+++ Sbjct: 194 DQGADYLVLGCTHYPFLKSSIQYIFGQKLTLIDSGFAVARQTAQILIKNGLLFEHESKES 253 Query: 246 DDHALFLSGKPDIAMRRLMQGF 267 L +SG+ +R ++Q Sbjct: 254 VKIELVVSGQNAEQLRPILQHL 275 >gi|119715551|ref|YP_922516.1| glutamate racemase [Nocardioides sp. JS614] gi|119536212|gb|ABL80829.1| glutamate racemase [Nocardioides sp. JS614] Length = 282 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 98/256 (38%), Gaps = 6/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG GGL V + + +P +YV D PYG +++ + ++ Sbjct: 18 DAPIGIFDSGFGGLTVARSVIDQLPHESIVYVGDTARQPYGPKPIGEVREYALECLDHLV 77 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L VIACN+A + + R + PA ++A A +++G I ++ T AT Sbjct: 78 ERGVKAL-VIACNSASAAMLRDARERYDVPVVEVIYPATRRAVAASRTGRIGVICTRATA 136 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + VE DE+ + Sbjct: 137 ESMAYDDAFAA-APHVRLVTQPCPRFVDFVEAGVTSG----DELISVAHEYLDPLISEGV 191 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ V + V + +++ A+ +L + + + ++ Sbjct: 192 DTLILGCTHYPLLTGVISLVMGDNVTLVSSAEECAKDVYKMLVQTDLIRPSGEPAYSFLT 251 Query: 253 SGKPDIAMRRLMQGFG 268 +G P + G Sbjct: 252 TGAPGEFETIGRRFLG 267 >gi|323359605|ref|YP_004226001.1| glutamate racemase [Microbacterium testaceum StLB037] gi|323275976|dbj|BAJ76121.1| glutamate racemase [Microbacterium testaceum StLB037] Length = 272 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 94/256 (36%), Gaps = 7/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P +Y+ D PYG +++ + + ++ Sbjct: 3 DAPIGIFDSGVGGLTVARAVSQQLPRESILYIGDTARSPYGPKPIADVRRYALEVLDTLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA + + R + PA++ A + T++G I ++ T T+ Sbjct: 63 EQG-VKMLVIACNTASAAMLRDARERYDVPVVEVIGPAVRTAMSTTRNGRIGVIGTVGTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +++ + + VE E+ E Sbjct: 122 GSRAYQDMLE-VNENLTVFAEACPRFVEFVEAGVT----DSPEVLATAEQYLAPLRHAGV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDHALF 251 D +VL CTHYP + + V + + A+ R L+ R H Sbjct: 177 DTLVLGCTHYPFLEGAISYVMGPDVSLVSSDSETAKDVYRQLVSRDLLAGPDATPRHRYE 236 Query: 252 LSGKPDIAMRRLMQGF 267 +G RL Sbjct: 237 ATGSSADDFLRLAHRL 252 >gi|160944622|ref|ZP_02091849.1| hypothetical protein FAEPRAM212_02135 [Faecalibacterium prausnitzii M21/2] gi|158443806|gb|EDP20810.1| hypothetical protein FAEPRAM212_02135 [Faecalibacterium prausnitzii M21/2] gi|295104374|emb|CBL01918.1| glutamate racemase [Faecalibacterium prausnitzii SL3/3] Length = 274 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 11/261 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSG+GGL ++++R +P IY D PYG+ + + Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPHEDIIYFGDTGRVPYGSRSPETILQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + +L K + AC T + + P A ++AA T++ Sbjct: 53 YARQDVAFLLSK-NVKCIMAACGTVSSTYPAAEAAQLPVPYLGVVDAAAREAAFVTRNRR 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEI 180 I ++ T AT+R L+ V I + + VE + K I Sbjct: 112 IGVIGTAATIRSRSYEKLLRQLVPGVEITARACPLFVPLVEAGYVDHSEAGKQQITKLVI 171 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E D ++L CTHYPL+ + + V +D + + A +L Sbjct: 172 AQYLTEVREAGVDTLILGCTHYPLLKSMIGEFMGPGVTLVDPAMTAAHHLERMLAERGLR 231 Query: 241 QTRVFDDHALFLSGKPDIAMR 261 + ++S PD ++ Sbjct: 232 ASHESGQAHFYVSDVPDSFVQ 252 >gi|161524256|ref|YP_001579268.1| glutamate racemase [Burkholderia multivorans ATCC 17616] gi|160341685|gb|ABX14771.1| glutamate racemase [Burkholderia multivorans ATCC 17616] Length = 292 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 8/243 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++ Sbjct: 22 PIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQ 81 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR Sbjct: 82 RAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRS 139 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ + + C L VE G ++ ++G D Sbjct: 140 ARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADT 195 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LFL 252 IVL CTHYP + R L + +D SD+IAR+ +L + A Sbjct: 196 IVLGCTHYPFLTPAIRSLIGERMTIVDTSDAIARQLARVLEQHGLRTPAGVPAAAPRFCS 255 Query: 253 SGK 255 +G Sbjct: 256 TGD 258 >gi|152967707|ref|YP_001363491.1| glutamate racemase [Kineococcus radiotolerans SRS30216] gi|151362224|gb|ABS05227.1| glutamate racemase [Kineococcus radiotolerans SRS30216] Length = 282 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 100/263 (38%), Gaps = 9/263 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I IFDSG+GGL V + + +P YV D PYG +++ + Sbjct: 3 PARPDADLPIGIFDSGVGGLTVARAVLDQLPHEAVHYVGDTAHAPYGPKPIAEVRRLALD 62 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + +++ + VIACN+A + + R + PA+++A T++G + ++ Sbjct: 63 VLDRLVESG-VKMLVIACNSASAAMLRDARERYDVPVVEVIQPAVRRAVRATRNGRVGVI 121 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT+ + + + + VE E+ G Sbjct: 122 GTRATISSRAYEDAFAA-APHLALTTAACPAFVEFVERGVTSGP----ELLTAARGYLAP 176 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RV 244 D +VL CTHYPL++ V R + V + +++ A L + R Sbjct: 177 AIAADVDTLVLGCTHYPLLMAVLRSVVGDDVTLVSSAEETAFDVYRELAARELLRPDDRP 236 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 H +G A R L + F Sbjct: 237 EPRHRFTSTGD-SAAFRHLARRF 258 >gi|325138826|gb|EGC61377.1| glutamate racemase [Neisseria meningitidis ES14902] Length = 270 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + + VIACNT + ++R +M L + A K A A T++ I I++T T Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH + ++ +L VEE ++ + + ++ + Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D +VL CTH+PL+ + + + V +D+ + A +L + T D+ Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSVITTAEETARVLAQEGLLNTDNNNPDYRF 240 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 241 YVSDIPLKFRTIGERFLG 258 >gi|153808969|ref|ZP_01961637.1| hypothetical protein BACCAC_03270 [Bacteroides caccae ATCC 43185] gi|149128302|gb|EDM19521.1| hypothetical protein BACCAC_03270 [Bacteroides caccae ATCC 43185] Length = 280 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILNKIREILPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKDELR-----STFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA ++ P LG + P ++ TQS I IL+ Sbjct: 70 -LGCHLVILACNTASAKALRSIQMNNLPKIDPERRVLGVIRPTVECIGNITQSRHIGILA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ +H ++ V+ + VE + + I+K I + Sbjct: 129 TAGTIKSESYPLEVHKLYPDIQVNGVACPMWVPLVENNEAQNEGADYFIRKYINQLL--Q 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + + D ++L CTHYPL++ +Q P + + + +A + L R + + Sbjct: 187 KDSQIDTVILGCTHYPLLLPKIQQYIPDNIRVIAQGEYVAESLKDYLCRHPEMDIKCTKN 246 Query: 248 HA--LFLSGKPDIAMR 261 ++ + + D + Sbjct: 247 NSCLFYTTEAEDKFIE 262 >gi|333014021|gb|EGK33381.1| glutamate racemase [Shigella flexneri K-304] Length = 265 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 EAEQLLPVLQRYGFET 254 >gi|37678352|ref|NP_932961.1| glutamate racemase [Vibrio vulnificus YJ016] gi|61214264|sp|Q7MQ40|MURI_VIBVY RecName: Full=Glutamate racemase gi|37197091|dbj|BAC92932.1| glutamate racemase [Vibrio vulnificus YJ016] Length = 263 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 141/266 (53%), Gaps = 11/266 (4%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E Q ++LIFDSG+GGL V Q++ +PE ++ Y+ D+ +PYG L R+ L Sbjct: 1 MESSNQPNVLIFDSGVGGLSVFQEINKRLPEVNYYYLFDNQAYPYGELSQETLLARVEAL 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + ++ L VIACNTA T++ LR+ P + +G VPAIK A+ + + +++ Sbjct: 61 VVKMTQQFAIDLVVIACNTASTIVLPALRAKLP-IPVVGVVPAIKPASLL-ANRAVGLIA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TPAT+ R YT +LI + + + L+ S L EE G ++ + E+ ++ Sbjct: 119 TPATVTRQYTHDLIRDFAHEKEVELLGSTRLVDIAEEKLRGRQVDQQELAMILKP----- 173 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + DV VL CTH+PL+ +Q+ + +D+ ++IARR + LL +++ T+ Sbjct: 174 MKHKVDVAVLGCTHFPLLKEEIQQVLGDEIILVDSGEAIARRVQSLLHQLSPQSTKTP-- 231 Query: 248 HALFLSGKP--DIAMRRLMQGFGLKS 271 +F + +P + A+ ++ G + Sbjct: 232 WRIFSTAQPWDEAALNGSLKTMGFNA 257 >gi|253564140|ref|ZP_04841597.1| glutamate racemase [Bacteroides sp. 3_2_5] gi|251947916|gb|EES88198.1| glutamate racemase [Bacteroides sp. 3_2_5] gi|301161564|emb|CBW21104.1| putative glutamate racemase [Bacteroides fragilis 638R] Length = 280 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L + P LG + P + + TQ+ + IL+ Sbjct: 70 -MGCHLVILACNTASAKALRTIQMNDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ +H + + + VE + + I+K I+ Sbjct: 129 TAGTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEASGEGADFFIRKYIDNLLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + ++ D +VL CTHYP+++ ++ P V + + +A + L R + Sbjct: 187 KDRQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHRHPEMDMKCTRE 246 Query: 246 DDHALFLSGKPDIAMR 261 + + D + Sbjct: 247 GKCRFYTTEAEDKFIE 262 >gi|326773725|ref|ZP_08233008.1| glutamate racemase [Actinomyces viscosus C505] gi|326636955|gb|EGE37858.1| glutamate racemase [Actinomyces viscosus C505] Length = 294 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 105/262 (40%), Gaps = 12/262 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++ Sbjct: 3 DAPIGMFDSGVGGLTVARSVLDQLPHEQVLYIGDTANSPYGPRDIAEVRSLALGIMDELV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILST 128 D+ L VIACNTA + + R + + + + PA + AA T++G + +++T Sbjct: 63 DRG-VKLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + V + + E E+ E + Sbjct: 122 RGTVDSRAYDDALQA-VPGVELVSQACPRFVELAERGVT----TGPEVLDVAEEYLAPIK 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD- 247 D ++L CTHYPL+V + V + +SD A+ L N + + Sbjct: 177 AAGVDTLILGCTHYPLLVGPISYVMGRDVTLVTSSDETAKDVYRALAGKNLLRGPEAPEP 236 Query: 248 -HALFLSGKPDIAMRRLMQGFG 268 H +G P+ + G Sbjct: 237 RHDFASTGDPEAFSVLARRFLG 258 >gi|218887895|ref|YP_002437216.1| glutamate racemase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758849|gb|ACL09748.1| glutamate racemase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 308 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 15/272 (5%) Query: 4 DNY--PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 DN I +FDSG+GGL VL+ +R MP +Y+ D PYG + Sbjct: 18 DNAGGFAPDAAHLPIGMFDSGVGGLTVLKALRTRMPCEDILYLGDTARLPYGTKSAETIT 77 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 + + S ++ + L V+ACNTA ++ D LR+ P + +G V P + A ++ Sbjct: 78 RYAVQAASRLVQRR-IKLLVVACNTATSVALDALRAANPGLPVVGVVQPGAQAACRASRR 136 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G I++++T +T+R IH I + EE KI ED + + Sbjct: 137 GNIAVIATESTIRGRAYHKAIHGLRPDAQIIGQPCPLFVPLAEEGWVDGKIVEDIAARYL 196 Query: 181 EGCFIEKEGKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + F G D +VL CTH+PL+ R + +D++ + A + L Sbjct: 197 DPIFRPASGSDTPETPDCLVLGCTHFPLLARAIRNVIGPEPVIVDSAATTALAVQAELQA 256 Query: 237 INTHQT-------RVFDDHALFLSGKPDIAMR 261 + + + +R Sbjct: 257 AGLVRPLRTGPGGNECGEARFLTTDDVPRFVR 288 >gi|313206123|ref|YP_004045300.1| glutamate racemase [Riemerella anatipestifer DSM 15868] gi|312445439|gb|ADQ81794.1| glutamate racemase [Riemerella anatipestifer DSM 15868] gi|315022930|gb|EFT35953.1| glutamate racemase [Riemerella anatipestifer RA-YM] gi|325336432|gb|ADZ12706.1| Glutamate racemase [Riemerella anatipestifer RA-GD] Length = 271 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 113/270 (41%), Gaps = 11/270 (4%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M +DN Q I +FDSG+GGL V ++++ MP + IY D PYG+ A+ Sbjct: 1 MLVDNL----SPQQPIGVFDSGVGGLTVAKEIKRQMPHENIIYFGDTKHLPYGDKSKEAI 56 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQ 119 + + +L++ VIACN+A E++ + A + V + + AY Sbjct: 57 VRFSEKIAEFLLEQ-NCKAIVIACNSATANALKEVKELVGNRAIVFDVVNPVAEKIAYEI 115 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + +++T AT+ I + + +++ +L +EE I Sbjct: 116 HTNVGVIATKATVNAGIYKKSIRRFNKFIKVDELATPLLVPAIEEGFKNHPITH----SI 171 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + K + ++L CTHYPL++ +Q V +D+ +A + L + + Sbjct: 172 LYHYLSNSKLKNIETLILGCTHYPLLLEEIKQYYGSRVRVIDSPSIVANYIKISLEKHHL 231 Query: 240 HQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268 + + + +LS + + FG Sbjct: 232 LNSEQKTTEMKFYLSDLTKNFEKISKKFFG 261 >gi|147677122|ref|YP_001211337.1| glutamate racemase [Pelotomaculum thermopropionicum SI] gi|146273219|dbj|BAF58968.1| glutamate racemase [Pelotomaculum thermopropionicum SI] Length = 266 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 8/260 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + +I +FDSGIGGL V ++ +P IY D PYG+ L + + D Sbjct: 2 RKTGAIGLFDSGIGGLTVAVEVYRQLPAESTIYFGDTAHVPYGSRNPGELYRFASRIV-D 60 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L+ + ACNT+ +L L+ ++ +G + P + A T + I +++T Sbjct: 61 FLEGEGAKYIIFACNTSSSLSLPILQER-KAVPMIGLIKPGVAAALQKTVNRRIGVIATE 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT++ + + ++ L VE G + +++ + Sbjct: 120 ATVKSGAYERELKRQDENVQVFCQAASRLVPLVEAGETGTPAAAEAVRE----YLFPLKE 175 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248 D ++L CTHYP + + V +D + + A L R+ +H Sbjct: 176 AGIDTLILGCTHYPFLKPLIAGEMGPGVQLVDPAAATVEEAGKELQRLGLAAGGPAVPEH 235 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 +SG P + + G Sbjct: 236 RFVVSGDPAAFQKAARRFLG 255 >gi|189350987|ref|YP_001946615.1| glutamate racemase [Burkholderia multivorans ATCC 17616] gi|189335009|dbj|BAG44079.1| glutamate racemase [Burkholderia multivorans ATCC 17616] Length = 290 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 8/243 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++ Sbjct: 20 PIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQ 79 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR Sbjct: 80 RAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRS 137 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ + + C L VE G ++ ++G D Sbjct: 138 ARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADT 193 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LFL 252 IVL CTHYP + R L + +D SD+IAR+ +L + A Sbjct: 194 IVLGCTHYPFLTPAIRSLIGERMTIVDTSDAIARQLARVLEQHGLRTPAGVPAAAPRFCS 253 Query: 253 SGK 255 +G Sbjct: 254 TGD 256 >gi|325263159|ref|ZP_08129894.1| glutamate racemase [Clostridium sp. D5] gi|324031552|gb|EGB92832.1| glutamate racemase [Clostridium sp. D5] Length = 277 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 106/255 (41%), Gaps = 8/255 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E K I +FDSG+GGL V+++M +P + +Y D PYG+ + + + + Sbjct: 5 AECKKTAPIGVFDSGVGGLTVVREMIRQLPNENIVYFGDTARVPYGSKSQNTIIRFSEQI 64 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + K + + CNTA L D +R F +P + A TQ+ + ++ Sbjct: 65 IRFLKKKKVKAIVIA-CNTASALALDAVRDEFEVPILGVVIPGARAAVEATQNLKVGVVG 123 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++ + +IH + + + + VEE K+ ++ I+ Sbjct: 124 TDATVQSGMYTKIIHGMNPEITVIEKACPLFVPLVEEGFKEHKVTQE----IIDFYLESI 179 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRV 244 + D ++L CTHYPL+ R + ++ + A + LL +N Q Sbjct: 180 KRTDIDAMILGCTHYPLLRSKIRAYMGDGIQIVNPAYETAMDLKKLLKEQDMVNDGQKAP 239 Query: 245 FDDHALFLSGKPDIA 259 + + F+S + Sbjct: 240 YSRYEFFVSDAAEKF 254 >gi|27364591|ref|NP_760119.1| glutamate racemase [Vibrio vulnificus CMCP6] gi|320154994|ref|YP_004187373.1| glutamate racemase [Vibrio vulnificus MO6-24/O] gi|29839520|sp|Q8DD39|MURI_VIBVU RecName: Full=Glutamate racemase gi|27360710|gb|AAO09646.1| glutamate racemase [Vibrio vulnificus CMCP6] gi|319930306|gb|ADV85170.1| glutamate racemase [Vibrio vulnificus MO6-24/O] Length = 263 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 141/266 (53%), Gaps = 11/266 (4%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E Q ++LIFDSG+GGL V Q++ +PE ++ Y+ D+ +PYG L R+ L Sbjct: 1 MESSNQPNVLIFDSGVGGLSVFQEINKRLPEVNYYYLFDNQAYPYGELSQETLLARVEAL 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + ++ L VIACNTA T++ LR+ P + +G VPAIK A+ + + +++ Sbjct: 61 VVKMTQQFAIDLVVIACNTASTIVLPTLRAKLP-IPVVGVVPAIKPASLL-ANRAVGLIA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TPAT+ R YT +LI + + + L+ S L EE G ++ + E+ ++ Sbjct: 119 TPATVTRQYTHDLIRDFAHEKEVELLGSTRLVDIAEEKLRGRQVDQQELAMILKP----- 173 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + DV VL CTH+PL+ +Q+ + +D+ ++IARR + LL +++ T+ Sbjct: 174 MKHKVDVAVLGCTHFPLLKEEIQQVLGDEIILVDSGEAIARRVQSLLHQLSPQSTKTP-- 231 Query: 248 HALFLSGKP--DIAMRRLMQGFGLKS 271 +F + +P + A+ ++ G + Sbjct: 232 WRIFSTAQPWDEAALNGSLKTMGFNA 257 >gi|315656446|ref|ZP_07909335.1| glutamate racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493005|gb|EFU82607.1| glutamate racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 271 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 14/264 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P Y+ D PYG +K+ + + ++ Sbjct: 5 NAPIGIFDSGLGGLTVARSIIDQLPGESVTYIGDTANSPYGTKPVERVKELSLSVMDKLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 D+ + VIACNTA RS + + L + PA+ +A + T++G I +++T Sbjct: 65 DRG-VKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIATH 123 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ +H+Y Q + + VE E+ Sbjct: 124 TTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSGP----ELLAVAREYLEPIRD 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR----INTHQTRV 244 D +VL CTHYPL+ + + V + +++ A R LL + + V Sbjct: 179 AGVDTLVLGCTHYPLLSGIISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGADTV 238 Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268 + +G R + G Sbjct: 239 NPRYQFLATGDTQTFTRLARRFLG 262 >gi|27380813|ref|NP_772342.1| glutamate racemase [Bradyrhizobium japonicum USDA 110] gi|27353978|dbj|BAC50967.1| glutamate racemase [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 106/272 (38%), Positives = 153/272 (56%), Gaps = 12/272 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + N P +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ + + Sbjct: 1 MTNSP-------TILVFDSGLGGLTVLREVVATRPDAHYVYVADDAFFPYGHHSEDEIIA 53 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R++ L +++ + P L VIACNTA TL+ LR+ + S+ F+G VPAIK A A ++S Sbjct: 54 RVVPLMGELIGTHDPDLVVIACNTASTLVLSHLRTAY-SLPFVGTVPAIKPACAQSKSRR 112 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +S+L T T++R YT LI + C + LV S LAS E G I +D+I E+ Sbjct: 113 VSVLGTKGTVKREYTKALIRDFAQGCEVTLVGSPELASLAERALGGHPISDDDILAELTP 172 Query: 183 CF---IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 CF G RTD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL Sbjct: 173 CFVGDAADAGARTDTVVLACTHYPLLLDRLTRLAPWPVDWIDPAPAIARRVSDLLG-PAI 231 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 +F S + L FG ++ Sbjct: 232 GGIMQSGAEMIFTSNRVHDLSATLTPFFGGRA 263 >gi|113868495|ref|YP_726984.1| glutamate racemase [Ralstonia eutropha H16] gi|113527271|emb|CAJ93616.1| glutamate racemase [Ralstonia eutropha H16] Length = 269 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 7/251 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL+++R L+P +Y+AD PYG + ++ R + ++ Sbjct: 4 APIGVFDSGLGGLSVLREIRALLPHESVLYLADSKYAPYGEKPEKFVEARTLQACEWLIA 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA + LR P + +G P +K AAA ++S ++ +L+T TL+ Sbjct: 64 QGCKAL-VIACNTATGHAVELLRKQLP-LPIIGVEPGLKPAAAASRSKVVGVLATANTLK 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ S + + + L S +E+ I +++ ++ D Sbjct: 122 SAKFARLLASLDGESRFICEAGLGLVSLIEQG----DIDGPAVRERLDTYLTPMLEAGAD 177 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + R + + +D +IAR+ L H F S Sbjct: 178 TLVLGCTHYPFLSGTIRAMVGDQLALVDTGSAIARQLARKLAEHKLAAAPDATPHDRFAS 237 Query: 254 GKPDIAMRRLM 264 K D A R M Sbjct: 238 TK-DAAHLRAM 247 >gi|308235626|ref|ZP_07666363.1| glutamate racemase [Gardnerella vaginalis ATCC 14018] gi|311114374|ref|YP_003985595.1| glutamate racemase [Gardnerella vaginalis ATCC 14019] gi|310945868|gb|ADP38572.1| glutamate racemase [Gardnerella vaginalis ATCC 14019] Length = 260 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 103/256 (40%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ V++++R MP IY D PYG +++ + Sbjct: 5 APIGVFDSGLGGISVVRELREAMPNERIIYFGDSANAPYGIKTPQEVRELSFKIVEHF-A 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPAT 131 VIACNTA + +LR + SM +G PA+K A + + + +TP T Sbjct: 64 SLNVKAIVIACNTATSAAVKDLREHY-SMPIIGMEPALKLACDLGGGKPQRVIVAATPLT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L+ + L++ + I L VE G K + + + F + Sbjct: 123 LKERKFAELMNRFTQDHQIFSRPCPDLVEIVENGDLGNK---NIVMSALHKYFDSYDLNN 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+ FR+ P V +D + + +L +N + + L Sbjct: 180 IDSVVLGCTHFVFYKSYFREFLPDCVKIVDGNAGTIHHLKSVLDSMNLLADKDDEGSVLL 239 Query: 252 LSGKPDIAMRRLMQGF 267 + + +L Q Sbjct: 240 TNSDSSDRIAKLSQSL 255 >gi|53711792|ref|YP_097784.1| glutamate racemase [Bacteroides fragilis YCH46] gi|52214657|dbj|BAD47250.1| glutamate racemase [Bacteroides fragilis YCH46] Length = 280 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L + P LG + P + + TQ+ + IL+ Sbjct: 70 -MGCHLVILACNTASAKALRTIQINDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ +H + + + VE + + I+K I+ Sbjct: 129 TAGTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEANSEGADFFIRKYIDNLLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + ++ D +VL CTHYP+++ ++ P V + + +A + L R + Sbjct: 187 KDRQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHRHPEMDMKCTRE 246 Query: 246 DDHALFLSGKPDIAMR 261 + + D + Sbjct: 247 GKCRFYTTEAEDKFIE 262 >gi|194290129|ref|YP_002006036.1| glutamate racemase [Cupriavidus taiwanensis LMG 19424] gi|193223964|emb|CAQ69973.1| GLUTAMATE RACEMASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 269 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 7/251 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL+++R L+P +Y+AD PYG +H ++ R + ++ Sbjct: 4 APIGVFDSGLGGLSVLREIRALLPHEPLLYLADSKYAPYGEKPEHFVEARTLQACEWMI- 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 VIACNTA LR P + +G P +K AAA + S ++ +L+T TL+ Sbjct: 63 GQGCKALVIACNTATGHAVALLRERLP-VPIIGVEPGLKPAAAASISKVVGVLATANTLK 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ S + + + L + VE+ ++ +++ +E D Sbjct: 122 SAKFARLLASLDGESRFLCQAGLGLVTLVEQG----QLDGPAVRERLEAYLKPMLDAGAD 177 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + R ++ + +D ++AR+ L H FLS Sbjct: 178 TLVLGCTHYPFLEGAIRAIAGDRLALVDTGIAVARQLARKLDEHALAALPGAAGHDRFLS 237 Query: 254 GKPDIAMRRLM 264 K D A R M Sbjct: 238 TK-DAAHLRAM 247 >gi|91976246|ref|YP_568905.1| glutamate racemase [Rhodopseudomonas palustris BisB5] gi|91682702|gb|ABE39004.1| glutamate racemase [Rhodopseudomonas palustris BisB5] Length = 266 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 108/259 (41%), Positives = 155/259 (59%), Gaps = 4/259 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +IL+FDSG+GGL VL+++ P+ H Y ADD FPYG + AL R++ L +++ Sbjct: 4 HPNILVFDSGLGGLTVLREIVKARPDAHVTYAADDAFFPYGQHSEEALVGRVVPLIGELI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D + P L VIACNTA TL+ LR+ + S+ F+G VPAIK A A +++ +S+L T T+ Sbjct: 64 DAHTPALVVIACNTASTLVLSHLRAAY-SVPFVGTVPAIKPACAASKTKRVSVLGTSGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI + C + LV S LA+ E G + ++ I+ EI CF++ +G RT Sbjct: 123 KREYTRALIRDFAGGCDVTLVGSAHLAALAEAALGGADVADEAIRAEIAPCFVDADGSRT 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHA 249 D IVLACTHYPL++ +L+PWPVDW+D + +IARR LL + HQ+ Sbjct: 183 DTIVLACTHYPLLLDRLMRLAPWPVDWIDPAPAIARRVVTLLGPGSGQSDHQSDHPGAEM 242 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +F SG+P L FG Sbjct: 243 VFTSGRPPRFTAALAPYFG 261 >gi|332291481|ref|YP_004430090.1| glutamate racemase [Krokinobacter diaphorus 4H-3-7-5] gi|332169567|gb|AEE18822.1| glutamate racemase [Krokinobacter diaphorus 4H-3-7-5] Length = 268 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 123/253 (48%), Gaps = 6/253 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I +FDSGIGG + +++ +P + IY+AD PYG + + ++ Sbjct: 4 KGNIGLFDSGIGGTSIWKEVVTHLPYENTIYLADSKHAPYGAKSKEEIIALSVKNTEKLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNTA T D LR + + F+G PAIK AA +++ I IL+T TL Sbjct: 64 -QLGAKIIVVACNTATTNAIDYLRKNY-DIPFIGIEPAIKPAALNSKNKTIGILATKGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 T + + + V L +E ++ +K+ ++ ++ Sbjct: 122 NSTLFQDTSEKWTQGTKVIEVIGEGLVPLIERG----DLESSVLKELLKSYVAPMITQKI 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL C+HYP ++ + +L P V +D+ ++AR+ + +L I +T +H LF Sbjct: 178 DYLVLGCSHYPYLIPLLTELLPEEVTIIDSGLAVARQTKSVLTEIKALETATTGNHQLFT 237 Query: 253 SGKPDIAMRRLMQ 265 +G P I + L++ Sbjct: 238 NGDPSILKKVLVR 250 >gi|89901373|ref|YP_523844.1| glutamate racemase [Rhodoferax ferrireducens T118] gi|89346110|gb|ABD70313.1| glutamate racemase [Rhodoferax ferrireducens T118] Length = 271 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 77/257 (29%), Positives = 114/257 (44%), Gaps = 3/257 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSGIGGL +L+ +R +P F+Y+AD PYG ++ + R + + +L Sbjct: 9 KRPIGVFDSGIGGLSILKALRAELPREDFVYMADSGHAPYGERDEAHVIARSSAITTHLL 68 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +Y V+ACNTA LR P + +G PA+K A A +++ I +++T +TL Sbjct: 69 AQYDIQALVVACNTATAAAISTLRQAHPLLPIIGLEPALKPALALSKTRRIGVMATRSTL 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 L+ S Q LA +E I G F EG Sbjct: 129 GSAKFGTLVASLAGQAEFMCQPCDGLADAIERQDTTKTIALCAYYTGAIGRFGINEG-EI 187 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP RQL V +D +++AR+ R LLP ++ T L Sbjct: 188 DTLVLGCTHYPFASDTLRQLLGSSVQLIDTGEAVARQTRRLLPSPSSADT--PGACRLLS 245 Query: 253 SGKPDIAMRRLMQGFGL 269 +G P GL Sbjct: 246 TGDPSTLRHAAHHWLGL 262 >gi|148256679|ref|YP_001241264.1| glutamate racemase [Bradyrhizobium sp. BTAi1] gi|146408852|gb|ABQ37358.1| glutamate racemase [Bradyrhizobium sp. BTAi1] Length = 265 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 105/269 (39%), Positives = 148/269 (55%), Gaps = 12/269 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + N P +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ AL Sbjct: 1 MTNRP-------TILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSQEALIA 53 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R++ L +++ ++P L VIACNTA LR+ + + F+G VPAIK A A +++ Sbjct: 54 RVVPLMGELIAGHRPDLIVIACNTASVQTLAPLRAAYAT-PFVGTVPAIKPACAQSRTKR 112 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +S+L T AT++R YT LI + C + LV S LAS E G + + I EI Sbjct: 113 VSVLGTKATVQREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTSVSDAAIAAEIAP 172 Query: 183 CF---IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 CF RTD +VLACTHYPL++ +L+PWPV W+D + +IARR LL T Sbjct: 173 CFVGDATDPAGRTDTVVLACTHYPLLLDRLERLAPWPVAWIDPAPAIARRVVDLLG-PAT 231 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 +F S KP + L FG Sbjct: 232 ASAGDCGATMIFTSQKPHQLSQALTSYFG 260 >gi|228913534|ref|ZP_04077163.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846121|gb|EEM91143.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 279 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 10 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 68 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 69 KQFPLKALVVACNTAAATALAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE +++K+ + + Sbjct: 128 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTEED 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 184 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 243 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 244 TTGSVSSFEHIAERWLGYQ 262 >gi|21673123|ref|NP_661188.1| glutamate racemase [Chlorobium tepidum TLS] gi|25453118|sp|Q8KFN8|MURI_CHLTE RecName: Full=Glutamate racemase gi|21646198|gb|AAM71530.1| glutamate racemase [Chlorobium tepidum TLS] Length = 272 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 8/257 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSGIGGL V++ ++ +P IY D PYG+ ++K +++L Sbjct: 9 DSPIGIFDSGIGGLTVVKAVQAALPSERIIYFGDTARVPYGSKSQVTIRKYARE-DTELL 67 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 K+QP L ++ACNT L D + T + +G + A + A T+SG I ++ T AT Sbjct: 68 MKHQPKLIIVACNTVSALALDVVEQTAGGIPVIGVLKAGAELAVQKTKSGRIGVIGTQAT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + I + + + EE I + E GK Sbjct: 128 IGSNAYTCAIREEKETLEVFPKACPLFVPLAEEGF----IDHPATRLVAEEYLAAFTGKE 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250 D +VL CTHYP++ + ++ + +D+++++A +A LL L Sbjct: 184 IDTLVLGCTHYPILRKIIESITGPEITIIDSAEAVASKAGELLAARGLLNQSPEKALPHL 243 Query: 251 FLSGKPDIAMRRLMQGF 267 +S P R L + F Sbjct: 244 MVSDLPQKF-RELYRLF 259 >gi|145639716|ref|ZP_01795319.1| glutamate racemase [Haemophilus influenzae PittII] gi|145271273|gb|EDK11187.1| glutamate racemase [Haemophilus influenzae PittII] gi|309750685|gb|ADO80669.1| Glutamate racemase [Haemophilus influenzae R2866] Length = 269 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 132/264 (50%), Gaps = 5/264 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AD 178 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D +VL CTH+PLI + P ++D S +IA+R + LL N + Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYNQ 238 Query: 249 ALFLSGKPDIA-MRRLMQGFGLKS 271 + P+ + ++ + +G +S Sbjct: 239 MFCTAHFPEESQFKKALHLWGFES 262 >gi|237785980|ref|YP_002906685.1| glutamate racemase [Corynebacterium kroppenstedtii DSM 44385] gi|259509812|sp|C4LJY7|MURI_CORK4 RecName: Full=Glutamate racemase gi|237758892|gb|ACR18142.1| Glutamate racemase [Corynebacterium kroppenstedtii DSM 44385] Length = 288 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 101/276 (36%), Gaps = 25/276 (9%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL V + + P +YV D PYG + + + D++ Sbjct: 3 NSPIGVFDSGVGGLTVARTIVDQAPTESIMYVGDTAHAPYGPKPREDIIRYSTAIADDLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNTA ++ D+ R + PA ++A A T++G + ++ T T+ Sbjct: 63 ARGA-KMIVIACNTAASVFLDKARELYDVPVVGVIEPASRRAVAATRNGRVGVIGTTGTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 I + +H V VE +I E + Sbjct: 122 ASGAYQRCIANLDPNIEVHAVDCPQFVPFVERGIT----TGRQIMGLAEAYLEPLQDVGV 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----- 247 D +VL CTHYPL+ V + + V + +S+ + +L + + + Sbjct: 178 DTVVLGCTHYPLLTGVIQLVMGDNVTLVSSSEEEGKEVPRVLYQEDLFNDANPEAESLDV 237 Query: 248 ---------------HALFLSGKPDIAMRRLMQGFG 268 +G P R + G Sbjct: 238 VDANVVNDYAGPEPVRTFESTGDPHRFARLARRFLG 273 >gi|148827156|ref|YP_001291909.1| glutamate racemase [Haemophilus influenzae PittGG] gi|166231038|sp|A5UFH0|MURI_HAEIG RecName: Full=Glutamate racemase gi|148718398|gb|ABQ99525.1| glutamate racemase [Haemophilus influenzae PittGG] Length = 269 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIH 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSS 175 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232 Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + P+ + ++ + +G +S Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262 >gi|302877351|ref|YP_003845915.1| glutamate racemase [Gallionella capsiferriformans ES-2] gi|302580140|gb|ADL54151.1| glutamate racemase [Gallionella capsiferriformans ES-2] Length = 266 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 6/255 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +I +FDSG+GGL VL+ +R L+P IYVAD PYG+ +++R + L ++ Sbjct: 5 SGAIGVFDSGVGGLSVLRHIRQLLPNERLIYVADSAHVPYGDKSARYIEQRSIELTRFLI 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + VIACNTA LR F S +G PA+K A A T++G++ +L+T TL Sbjct: 65 SQGA-DAIVIACNTATAAAAATLRRDF-SCPIIGMEPAVKPAVAATKNGIVGVLATIGTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 S L+ Y I L +VE + ++ +E + Sbjct: 123 ESARFSALLERYAGNVTIVTQGCPGLVEQVERG----DLTGPLTRELVERYTTPLLEQGA 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP + + R ++ + +D +++AR L + + + Sbjct: 179 DTLILGCTHYPFLAGLIRDIAGQDIQLIDTGEAVARHLLRRLQTELSDRAPTQASVQFWT 238 Query: 253 SGKPDIAMRRLMQGF 267 SG A + + Sbjct: 239 SGDEARASTIISALW 253 >gi|300768032|ref|ZP_07077938.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494381|gb|EFK29543.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 279 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 9/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +++I DSG+GGL V+++ +P ++ D PYG ++ + ++ Sbjct: 10 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRTFSFQMADFLM 69 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K Q + VIACNTA LR S+ +G + P + A + I +++T T Sbjct: 70 AK-QIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + I + + + VE + K+ + + + + Sbjct: 128 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVA----KRVVAETLKQLKKQD 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D +VL CTHYPL+ + + + V +D+ +L ++ R + Sbjct: 184 VDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIANDRSTKRYPDE 243 Query: 250 LFLSGKPDIAMRRLMQGFG 268 + +G D G Sbjct: 244 YYTTGAADQFEAIARNWLG 262 >gi|184159912|ref|YP_001848251.1| glutamate racemase [Acinetobacter baumannii ACICU] gi|183211506|gb|ACC58904.1| Glutamate racemase [Acinetobacter baumannii ACICU] gi|322509829|gb|ADX05283.1| Glutamate racemase [Acinetobacter baumannii 1656-2] Length = 266 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 127/268 (47%), Gaps = 10/268 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E E+K ++ Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235 Query: 248 HALFLSGKP----DIAMRRLMQGFGLKS 271 H ++ S P D+ L + +K+ Sbjct: 236 HIIWTSSDPLEVADVTFSLLSEKLSVKA 263 >gi|89074505|ref|ZP_01160982.1| glutamate racemase [Photobacterium sp. SKA34] gi|89049793|gb|EAR55343.1| glutamate racemase [Photobacterium sp. SKA34] Length = 270 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 81/233 (34%), Positives = 129/233 (55%), Gaps = 6/233 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D+ L +R + S +++ Sbjct: 5 KKIVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELPDNVLIERTNHIVSTLVE 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +YQ L VIACNTA T++ LR ++ +G VPAIK AA +Q+ +I +L+TPAT++ Sbjct: 65 QYQADLVVIACNTASTIVLPTLRQNL-NIPIVGVVPAIKPAAKLSQTKVIGLLATPATVK 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT LI+ + S C + ++ S L E+ G I E+ + + ++ D Sbjct: 124 REYTQQLINQFASDCEVKMIGSTRLVEMAEQKLRGEAISLHELSEILAPW-----QQQVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 I+L CTH+PLI + + V +D+ +IA R LL + R + Sbjct: 179 SIILGCTHFPLIKEEIKAVLNNEVSIVDSGKAIAVRVSSLLGLSEQEKQRHNE 231 >gi|229520053|ref|ZP_04409481.1| glutamate racemase [Vibrio cholerae TM 11079-80] gi|229342841|gb|EEO07831.1| glutamate racemase [Vibrio cholerae TM 11079-80] Length = 265 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVGTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLG--VEKGVGTNQKHQIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNINLEQLGFN 256 >gi|89895983|ref|YP_519470.1| hypothetical protein DSY3237 [Desulfitobacterium hafniense Y51] gi|89335431|dbj|BAE85026.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 295 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 20/266 (7%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K Q+ I +FDSG+GGL V++++ +P+ IY D PYGN L + S Sbjct: 16 KLAQHVIGMFDSGVGGLTVMKEIVTQLPDVQIIYFGDTARVPYGNRSREELIHFGEEIIS 75 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILST 128 ++++ V+ACNT+ LR F ++ +G P K A T +G I +++T Sbjct: 76 FLIEQGA-EAIVVACNTSSANAVPVLREQF-NLPLIGTIEPGAKAAIQATATGNIGLIAT 133 Query: 129 PATLRRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 AT+R S+ + +S+ + + + VE E + Sbjct: 134 EATVRSKAYSSAVRRILSKRRGGHAIELVKAQACPLFVPLVEAGLS----HSPEARGIAR 189 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + D ++L CTHYP + V +++ + +D + ++ + +L ++ ++ Sbjct: 190 TYLAPIQEAQVDALILGCTHYPFLAPVIQEILGEEIILVDPAQAMTEELKEVLKQLEYNR 249 Query: 242 T------RVFDDHALFLSGKPDIAMR 261 + H F+SG P + R Sbjct: 250 ESGQETHKAPGHHRFFVSGDPVLFER 275 >gi|219670410|ref|YP_002460845.1| glutamate racemase [Desulfitobacterium hafniense DCB-2] gi|219540670|gb|ACL22409.1| glutamate racemase [Desulfitobacterium hafniense DCB-2] Length = 295 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 20/266 (7%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K Q+ I +FDSG+GGL V++++ +P+ IY D PYGN L + S Sbjct: 16 KLAQHVIGMFDSGVGGLTVMKEIVTQLPDVQIIYFGDTARVPYGNRSREELIHFGEEIIS 75 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILST 128 ++++ V+ACNT+ LR F ++ +G P K A T +G I +++T Sbjct: 76 FLIEQGA-EAIVVACNTSSANAVPVLREQF-NLPLIGTIEPGAKAAIQATATGNIGLIAT 133 Query: 129 PATLRRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 AT+R S+ + +S+ + + + VE E + Sbjct: 134 EATVRSKAYSSAVRRILSKRRGGHAIELVKAQACPLFVPLVEAGLS----HSPEARGIAR 189 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + D ++L CTHYP + V +++ + +D + ++ + +L ++ ++ Sbjct: 190 TYLAPIQEAQVDALILGCTHYPFLAPVIQEILGEEIILVDPAQAMTEELKEVLKQLEYNR 249 Query: 242 T------RVFDDHALFLSGKPDIAMR 261 + H F+SG P + R Sbjct: 250 ESGQETHKAPGHHRFFVSGDPVLFER 275 >gi|304390777|ref|ZP_07372729.1| glutamate racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325660|gb|EFL92906.1| glutamate racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 271 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 14/264 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P Y+ D PYG +K+ + + ++ Sbjct: 5 NAPIGIFDSGLGGLTVARSIIDQLPGESVTYIGDTANSPYGTKPVERVKELSLSVMDKLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 D+ + VIACNTA RS + + L + PA+ +A + T++G I +++T Sbjct: 65 DRG-VKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIATH 123 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ +H+Y Q + + VE E+ Sbjct: 124 TTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSGP----ELLAVAREYLEPIRD 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR----INTHQTRV 244 D +VL CTHYPL+ + + V + +++ A R LL + + V Sbjct: 179 AGVDTLVLGCTHYPLLSGIISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGTDTV 238 Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268 + +G R + G Sbjct: 239 NPRYQFLATGDTQTFTRLARRFLG 262 >gi|301170494|emb|CBW30101.1| glutamate racemase [Haemophilus influenzae 10810] Length = 269 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 9/270 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIH 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232 Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + P+ + ++ + +G +S Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262 >gi|237755668|ref|ZP_04584279.1| glutamate racemase [Sulfurihydrogenibium yellowstonense SS-5] gi|237692180|gb|EEP61177.1| glutamate racemase [Sulfurihydrogenibium yellowstonense SS-5] Length = 260 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 12/248 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSGIGGL V +++ P+ Y+ D PYGN + + + S + Sbjct: 2 PIGVFDSGIGGLTVFKEIAASFPKVDLYYLGDTARVPYGNKSKTTIIRYSVECASYLYHN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 Y VIACNTA + D LR P + +G V P + A +++ I ++ T AT++ Sbjct: 62 YNVDAIVIACNTASSYALDTLREILP-IPVIGVVQPGAESAVKVSKNKKIGVIGTSATIK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + S ++ + + VEE ++ + +K+ ++ + D Sbjct: 121 SNSYLETLKSLDKDLEVYQKACPLFVPLVEEGWIDNEVAKLTVKEYLD----DLVKTGID 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L CTHYPL+ + + L P ++ +D+S +I + + ++N +T +F++ Sbjct: 177 TLILGCTHYPLLKNTIKGLYP-HLNIVDSSVAIVEHLKNI--KLNIEET---GKRKIFIT 230 Query: 254 GKPDIAMR 261 + + Sbjct: 231 DESHAFDK 238 >gi|298292133|ref|YP_003694072.1| glutamate racemase [Starkeya novella DSM 506] gi|296928644|gb|ADH89453.1| glutamate racemase [Starkeya novella DSM 506] Length = 280 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 96/251 (38%), Positives = 145/251 (57%), Gaps = 3/251 (1%) Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 +P +IL+FDSG+GGL V +++ P+ F+Y ADD GFPYG + L R++ Sbjct: 7 HPSAALRAPTILVFDSGLGGLSVFRELARTRPDARFVYAADDAGFPYGARSEDDLVARVL 66 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125 + ++ + P VIACNTA TL+ LR+ + S+ F+G VPAIK A + + +S+ Sbjct: 67 AVMDALVARLAPDAVVIACNTASTLVLPALRARY-SIPFVGTVPAIKPACEGSLTKQVSV 125 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+TP T++R YT LI + C + LV S LA E G K+ ++E EI F+ Sbjct: 126 LATPGTVKRDYTQALIRDFAGACRVTLVGSTRLAGLAEAAMVGEKVADEEFAAEIAPAFV 185 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 + RTD +VLACTHYPL++ ++++PWPV W+D + +IARR LL + + Sbjct: 186 REGKSRTDTVVLACTHYPLVLDRLQKVAPWPVRWVDPAPAIARRLSSLLGPVAFAASPAP 245 Query: 246 DDHALFLSGKP 256 LF +G+P Sbjct: 246 --LRLFSTGQP 254 >gi|229154555|ref|ZP_04282672.1| Glutamate racemase [Bacillus cereus ATCC 4342] gi|228628953|gb|EEK85663.1| Glutamate racemase [Bacillus cereus ATCC 4342] Length = 284 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 7/258 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ ++ + + L Sbjct: 15 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVLEMV-EFL 73 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 74 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 132 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE +++K+ + + Sbjct: 133 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTEED 188 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 189 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 248 Query: 252 LSGKPDIAMRRLMQGFGL 269 +G + G Sbjct: 249 TTGSALSFEHIAERWLGY 266 >gi|153803564|ref|ZP_01958150.1| glutamate racemase [Vibrio cholerae MZO-3] gi|153831286|ref|ZP_01983953.1| glutamate racemase [Vibrio cholerae 623-39] gi|229512363|ref|ZP_04401839.1| glutamate racemase [Vibrio cholerae TMA 21] gi|229527102|ref|ZP_04416496.1| glutamate racemase [Vibrio cholerae 12129(1)] gi|254292226|ref|ZP_04962991.1| glutamate racemase [Vibrio cholerae AM-19226] gi|297581776|ref|ZP_06943697.1| glutamate racemase [Vibrio cholerae RC385] gi|124120901|gb|EAY39644.1| glutamate racemase [Vibrio cholerae MZO-3] gi|148873230|gb|EDL71365.1| glutamate racemase [Vibrio cholerae 623-39] gi|150421862|gb|EDN13844.1| glutamate racemase [Vibrio cholerae AM-19226] gi|229335333|gb|EEO00816.1| glutamate racemase [Vibrio cholerae 12129(1)] gi|229350618|gb|EEO15562.1| glutamate racemase [Vibrio cholerae TMA 21] gi|297533870|gb|EFH72710.1| glutamate racemase [Vibrio cholerae RC385] gi|327483054|gb|AEA77461.1| Glutamate racemase [Vibrio cholerae LMA3894-4] Length = 265 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLG--VEKGVGTNQKHQIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNINLEQLGFN 256 >gi|260557842|ref|ZP_05830055.1| glutamate racemase [Acinetobacter baumannii ATCC 19606] gi|260408633|gb|EEX01938.1| glutamate racemase [Acinetobacter baumannii ATCC 19606] Length = 266 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 10/268 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI Y + LV + LA ++E E+K ++ Sbjct: 120 ATTVKGKNLKSLIEMYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235 Query: 248 HALFLSGKP----DIAMRRLMQGFGLKS 271 H ++ S P D+ L + +K+ Sbjct: 236 HIIWTSSDPLEVADVTFSLLSEKLSVKA 263 >gi|153826314|ref|ZP_01978981.1| glutamate racemase [Vibrio cholerae MZO-2] gi|149739982|gb|EDM54161.1| glutamate racemase [Vibrio cholerae MZO-2] Length = 265 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLG--VEKGVDTNQKHQIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNINLEQLGFN 256 >gi|257056887|ref|YP_003134719.1| glutamate racemase [Saccharomonospora viridis DSM 43017] gi|256586759|gb|ACU97892.1| glutamate racemase [Saccharomonospora viridis DSM 43017] Length = 265 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V + + +P YV D + PYG +++ + ++ Sbjct: 9 APIGIFDSGVGGLTVARAVADQLPAERLRYVGDTLHAPYGPLPIARVRELALRALDGLVA 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA + R + F +PA ++A A T++G + ++ T T+R Sbjct: 69 DGVKAL-VIACNTASAACLRDARERYDIPVFEVVLPAARRAVATTRNGHVGLIGTEGTVR 127 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + + V+ VE + +I +G D Sbjct: 128 SRAYDDALA--ATGVRLSSVACPRFVEFVERGVTSGR----QILGLAQGYLEPLTRADVD 181 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFL 252 ++L CTHYPL+ V + + V + +++ A+ +L ++ R +H Sbjct: 182 TLILGCTHYPLLTGVLQTVMGPDVTLVSSAEETAKDVVRVLTELDLLADRDEPPEHEFIA 241 Query: 253 SGKPDIAMRRLMQGFGL 269 +G + + + GL Sbjct: 242 TGPAEPFTKLARRFMGL 258 >gi|229525050|ref|ZP_04414455.1| glutamate racemase [Vibrio cholerae bv. albensis VL426] gi|229338631|gb|EEO03648.1| glutamate racemase [Vibrio cholerae bv. albensis VL426] Length = 265 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +L+TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLLATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLG--VEKGVGTNQKHQIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNINLEQLGFN 256 >gi|260580700|ref|ZP_05848527.1| glutamate racemase [Haemophilus influenzae RdAW] gi|260092762|gb|EEW76698.1| glutamate racemase [Haemophilus influenzae RdAW] Length = 269 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIH 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ Sbjct: 57 RTLAACQLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSS 175 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232 Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + P+ + ++ + +G +S Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262 >gi|170680254|ref|YP_001746359.1| glutamate racemase [Escherichia coli SMS-3-5] gi|293407588|ref|ZP_06651507.1| glutamate racemase [Escherichia coli FVEC1412] gi|298383336|ref|ZP_06992929.1| glutamate racemase [Escherichia coli FVEC1302] gi|300896472|ref|ZP_07114999.1| hypothetical protein HMPREF9552_00793 [Escherichia coli MS 198-1] gi|170517972|gb|ACB16150.1| glutamate racemase [Escherichia coli SMS-3-5] gi|291425505|gb|EFE98544.1| glutamate racemase [Escherichia coli FVEC1412] gi|298276370|gb|EFI17890.1| glutamate racemase [Escherichia coli FVEC1302] gi|300359665|gb|EFJ75535.1| hypothetical protein HMPREF9552_00793 [Escherichia coli MS 198-1] Length = 262 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQKRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 EAEQLLPVLQRYGFET 254 >gi|261210140|ref|ZP_05924437.1| glutamate racemase [Vibrio sp. RC341] gi|260840680|gb|EEX67229.1| glutamate racemase [Vibrio sp. RC341] Length = 265 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELAQETLIARVDALVTRMVEEE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI ++ + ++ L+ S L + EE G + DE++ + DV Sbjct: 127 YTQELIRNFSANKNVELLGSTRLVNMAEEKLRGKPLDLDELESILHPL-----KHTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL + H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGVAIARRVQELLGIDKGKSSN--RKHQIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNIKLEQLGFN 256 >gi|187776066|ref|ZP_02800193.2| glutamate racemase [Escherichia coli O157:H7 str. EC4196] gi|188494268|ref|ZP_03001538.1| glutamate racemase [Escherichia coli 53638] gi|189010240|ref|ZP_02805903.2| glutamate racemase [Escherichia coli O157:H7 str. EC4076] gi|189402183|ref|ZP_02780670.2| glutamate racemase [Escherichia coli O157:H7 str. EC4401] gi|189403088|ref|ZP_02793288.2| glutamate racemase [Escherichia coli O157:H7 str. EC4486] gi|189404032|ref|ZP_02786646.2| glutamate racemase [Escherichia coli O157:H7 str. EC4501] gi|189404858|ref|ZP_02811842.2| glutamate racemase [Escherichia coli O157:H7 str. EC869] gi|208807428|ref|ZP_03249765.1| glutamate racemase [Escherichia coli O157:H7 str. EC4206] gi|208814014|ref|ZP_03255343.1| glutamate racemase [Escherichia coli O157:H7 str. EC4045] gi|208818359|ref|ZP_03258679.1| glutamate racemase [Escherichia coli O157:H7 str. EC4042] gi|209400751|ref|YP_002273491.1| glutamate racemase [Escherichia coli O157:H7 str. EC4115] gi|217325108|ref|ZP_03441192.1| glutamate racemase [Escherichia coli O157:H7 str. TW14588] gi|309783926|ref|ZP_07678571.1| glutamate racemase [Shigella dysenteriae 1617] gi|30043002|gb|AAP18724.1| glutamate racemase [Shigella flexneri 2a str. 2457T] gi|56384049|gb|AAN45478.2| glutamate racemase [Shigella flexneri 2a str. 301] gi|187769174|gb|EDU33018.1| glutamate racemase [Escherichia coli O157:H7 str. EC4196] gi|188489467|gb|EDU64570.1| glutamate racemase [Escherichia coli 53638] gi|189001518|gb|EDU70504.1| glutamate racemase [Escherichia coli O157:H7 str. EC4076] gi|189357222|gb|EDU75641.1| glutamate racemase [Escherichia coli O157:H7 str. EC4401] gi|189362690|gb|EDU81109.1| glutamate racemase [Escherichia coli O157:H7 str. EC4486] gi|189367934|gb|EDU86350.1| glutamate racemase [Escherichia coli O157:H7 str. EC4501] gi|189373225|gb|EDU91641.1| glutamate racemase [Escherichia coli O157:H7 str. EC869] gi|208727229|gb|EDZ76830.1| glutamate racemase [Escherichia coli O157:H7 str. EC4206] gi|208735291|gb|EDZ83978.1| glutamate racemase [Escherichia coli O157:H7 str. EC4045] gi|208738482|gb|EDZ86164.1| glutamate racemase [Escherichia coli O157:H7 str. EC4042] gi|209162151|gb|ACI39584.1| glutamate racemase [Escherichia coli O157:H7 str. EC4115] gi|217321329|gb|EEC29753.1| glutamate racemase [Escherichia coli O157:H7 str. TW14588] gi|308928297|gb|EFP73759.1| glutamate racemase [Shigella dysenteriae 1617] gi|313648865|gb|EFS13304.1| glutamate racemase [Shigella flexneri 2a str. 2457T] gi|320173014|gb|EFW48236.1| Glutamate racemase [Shigella dysenteriae CDC 74-1112] gi|320182828|gb|EFW57705.1| Glutamate racemase [Shigella flexneri CDC 796-83] gi|320190929|gb|EFW65579.1| Glutamate racemase [Escherichia coli O157:H7 str. EC1212] gi|323167446|gb|EFZ53154.1| glutamate racemase [Shigella sonnei 53G] gi|326338013|gb|EGD61843.1| Glutamate racemase [Escherichia coli O157:H7 str. 1044] gi|326342692|gb|EGD66465.1| Glutamate racemase [Escherichia coli O157:H7 str. 1125] gi|332088274|gb|EGI93394.1| glutamate racemase [Shigella boydii 3594-74] gi|332751534|gb|EGJ81933.1| glutamate racemase [Shigella flexneri 4343-70] gi|332751805|gb|EGJ82202.1| glutamate racemase [Shigella flexneri K-671] gi|332752573|gb|EGJ82959.1| glutamate racemase [Shigella flexneri 2747-71] gi|332764484|gb|EGJ94716.1| glutamate racemase [Shigella flexneri 2930-71] gi|332997949|gb|EGK17555.1| glutamate racemase [Shigella flexneri VA-6] gi|332998392|gb|EGK17990.1| glutamate racemase [Shigella flexneri K-272] gi|332998878|gb|EGK18472.1| glutamate racemase [Shigella flexneri K-218] gi|333014084|gb|EGK33441.1| glutamate racemase [Shigella flexneri K-227] Length = 262 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 EAEQLLPVLQRYGFET 254 >gi|86134483|ref|ZP_01053065.1| Asp/Glu/hydantoin racemase [Polaribacter sp. MED152] gi|85821346|gb|EAQ42493.1| Asp/Glu/hydantoin racemase [Polaribacter sp. MED152] Length = 263 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 7/257 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K QN I FDSGIGG + +++ L+P IY++D PYG ++ + Sbjct: 1 MKANQNPIGFFDSGIGGTSIWKEVTALLPNESTIYLSDSKNAPYGTKNKDSILDLAIKNT 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +L+K L V+ACNTA T D LR+ + + F+G PAIK AA T++ I IL+T Sbjct: 61 EFLLNK-NCKLIVVACNTATTNAIDYLRANYK-IPFIGIEPAIKPAALKTKTKRIGILAT 118 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + Q + L +EE KI E+++ + Sbjct: 119 KGTLNSALFEKTASTIDQQIIVKETIGTGLVELIEEG----KIASKEMEQLLASYINPLV 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDD 247 + D +VL CTHYP ++ ++++ ++ +D+ ++A++ + +L + + H Sbjct: 175 KENIDCLVLGCTHYPYLIPAIQKITGNQLEIIDSGQAVAKQTKAILQQHDLMHNGSASAK 234 Query: 248 HALFLSGKPDIAMRRLM 264 H +++ + R L Sbjct: 235 HEFYINKDKSVLERILS 251 >gi|301023753|ref|ZP_07187492.1| hypothetical protein HMPREF9534_03554 [Escherichia coli MS 69-1] gi|300396897|gb|EFJ80435.1| hypothetical protein HMPREF9534_03554 [Escherichia coli MS 69-1] Length = 262 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIITAVQKRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 EAEQLLPVLQRYGFET 254 >gi|145641879|ref|ZP_01797454.1| glutamate racemase [Haemophilus influenzae R3021] gi|145273501|gb|EDK13372.1| glutamate racemase [Haemophilus influenzae 22.4-21] Length = 269 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIH 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKSASEITKTKH 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 116 IGLLATKGTVKRHYVDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232 Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + P+ + ++ + +G +S Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262 >gi|182678309|ref|YP_001832455.1| glutamate racemase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634192|gb|ACB94966.1| glutamate racemase [Beijerinckia indica subsp. indica ATCC 9039] Length = 287 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 103/260 (39%), Positives = 154/260 (59%), Gaps = 6/260 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 LIFDSG+GGL V ++ L P+ ++Y ADD FPYG + AL R++ + ++ Y Sbjct: 11 LIFDSGLGGLTVFAEILRLRPQADYLYAADDAAFPYGAMSEEALITRVLDVMGRLIASYA 70 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 P VIACNTA TL+ LR+ +P + F+G VPA+K A ++S LIS+L+TP T+ R Y Sbjct: 71 PDAVVIACNTASTLVLPHLRAAYPDLPFVGTVPAVKPAGEISRSHLISVLATPGTVARDY 130 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T L+ +Y S C + LV S LA E G + ++ I EI CF++ +G+RTD +V Sbjct: 131 THELVRTYASHCAVTLVGSRKLAGLAEAMMKGESVPDEAIAHEIAPCFVDFDGRRTDCVV 190 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR----INTHQTRVFDDHA-LF 251 LACTH+PL+ F++L+PWPV+W+D + +IARR +L + + H F Sbjct: 191 LACTHFPLLTDHFQRLAPWPVEWIDPAPAIARRLDYVLREELGFRSEGRVEEGVRHRVFF 250 Query: 252 LSGKP-DIAMRRLMQGFGLK 270 G P A+ +++ GL+ Sbjct: 251 TKGGPLSPALEAVLRMRGLE 270 >gi|119773335|ref|YP_926075.1| glutamate racemase [Shewanella amazonensis SB2B] gi|119765835|gb|ABL98405.1| glutamate racemase [Shewanella amazonensis SB2B] Length = 266 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 138/264 (52%), Gaps = 6/264 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E L IL+FDSGIGGL VL ++R L+P F Y+ D+ PYG + L + L Sbjct: 1 MEFGLARPILVFDSGIGGLSVLSEIRQLLPSNDFYYLFDNARLPYGELTEQVLVDGCVEL 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 K L VIACNTA TL+ LRS ++ +G VPAIK AA++T SG I +L+ Sbjct: 61 VVSAATKINAALVVIACNTASTLVLPVLRSKL-TIPVVGVVPAIKPAASHTLSGHIGLLA 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TPAT++R+YT L+ + S C +H+ S L E+ G+ + +++ G Sbjct: 120 TPATVKRSYTHELVTKFASDCQVHMFGSSELVMMAEQKMAGVPVD----MEKLTGILAPI 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + + DV+VL CTH+P++ + Q+ + LD+ +IA R + +L + HQ + Sbjct: 176 QATQVDVLVLGCTHFPMLAYELSQILGPGIKLLDSGFAIASRVQHVLEGLGEHQHPAPNS 235 Query: 248 H-ALFLSGKPDIAMRRLMQGFGLK 270 A + + + + + + +G Sbjct: 236 MKAWYTTPSLTLGLIQSLTDYGFS 259 >gi|316935236|ref|YP_004110218.1| glutamate racemase [Rhodopseudomonas palustris DX-1] gi|315602950|gb|ADU45485.1| glutamate racemase [Rhodopseudomonas palustris DX-1] Length = 264 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 103/257 (40%), Positives = 152/257 (59%), Gaps = 4/257 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++ Sbjct: 5 PTILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIA 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + P L VIACNTA T+ LR+ + + F+G VPAIK A A +++ +S+L T AT+R Sbjct: 65 AHAPDLVVIACNTASTMTLAPLRARYR-VPFVGTVPAIKPACARSRTKRVSVLGTSATVR 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG--KR 191 YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + R Sbjct: 124 LEYTRALIRDFAQGCEVSLVGSVRLATLAETALGGGEVTDAAIRAEIAPCFVEADATRGR 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 TD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H + +F Sbjct: 184 TDSVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGEATGHAASPKAEM-IF 242 Query: 252 LSGKPDIAMRRLMQGFG 268 SG+ A L FG Sbjct: 243 TSGRQPRASAGLAPYFG 259 >gi|153217406|ref|ZP_01951157.1| glutamate racemase [Vibrio cholerae 1587] gi|124113576|gb|EAY32396.1| glutamate racemase [Vibrio cholerae 1587] Length = 265 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLG--VEKGVGTNQKHQIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNINLEQLGFN 256 >gi|289577814|ref|YP_003476441.1| glutamate racemase [Thermoanaerobacter italicus Ab9] gi|289527527|gb|ADD01879.1| glutamate racemase [Thermoanaerobacter italicus Ab9] Length = 264 Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 8/255 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + + + Sbjct: 4 RPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMRE 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + VIACNT +I +S + + F + AA YT + I +++T T+ Sbjct: 64 QK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVE 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I ++ + +E+ I + C E + + D Sbjct: 120 SKSYEKNIKIIDKNIKVYQKACPEFVPLIEKGLYNSPIAYET----ASNCLKELKERDID 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYPL++ V ++ V +D + +A + L R + + F+S Sbjct: 176 TLVLGCTHYPLMMEVIEEIVGENVKIVDPAIKLAYDVKDYLLRRDLFNIQNIGKTKFFVS 235 Query: 254 GKPDIAMRRLMQGFG 268 G D ++ G Sbjct: 236 GDKDNFIKTAEMLLG 250 >gi|262404892|ref|ZP_06081446.1| glutamate racemase [Vibrio sp. RC586] gi|262348976|gb|EEY98115.1| glutamate racemase [Vibrio sp. RC586] Length = 265 Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELAQETLIARVDALVTRMVEEE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI ++ + ++ L+ S L + EE G + DE++ + DV Sbjct: 127 YTQELIRNFSANKNVELLGSTRLVNMAEEKLRGKPLDLDELESILHPL-----KHTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL + H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGVAIARRVQELLGIDKGESSN--RKHQIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNIKLEQLGFN 256 >gi|255009918|ref|ZP_05282044.1| putative glutamate racemase [Bacteroides fragilis 3_1_12] gi|313147706|ref|ZP_07809899.1| glutamate racemase [Bacteroides fragilis 3_1_12] gi|313136473|gb|EFR53833.1| glutamate racemase [Bacteroides fragilis 3_1_12] Length = 280 Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPDYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKDELR-----STFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA ++ PS LG + P ++ + TQ+ + +L+ Sbjct: 70 -MGCHLVILACNTASAKALRTIQMNNLPDIDPSRRVLGVIRPTVECIGSITQTRHVGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + + + VE + + I+K I Sbjct: 129 TAGTIKSESYPLEIHKLFPDIKVSGEACPMWVPLVENNEANGEGTDFFIRKYIHNLLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D I+L CTHYPL++ +Q P + + + +A + L R + Sbjct: 187 KDGQIDTIILGCTHYPLLLPKIQQFVPQSMKVVAQGEYVAASLKDYLYRHPEMDRKCTRG 246 Query: 246 DDHALFLSGKPDIAMR 261 + + D + Sbjct: 247 GSCSFCTTEAEDKFIE 262 >gi|330827753|ref|YP_004390705.1| glutamate racemase [Aeromonas veronii B565] gi|328802889|gb|AEB48088.1| Glutamate racemase [Aeromonas veronii B565] Length = 267 Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 12/265 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL + +++R ++P +++ Y D+ FPYG + AL L + ++ Sbjct: 2 ANILVFDSGMGGLTIYREIRRVLPAHNYFYCFDNANFPYGELSEPALIAACTRLVTTMVA 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++Q L VIACNTA T+ LR + +G VPAIK AAA T++G I +L+TP T+ Sbjct: 62 RHQIDLVVIACNTASTIALPALREAL-DIPVVGVVPAIKPAAAQTRNGCIGLLATPGTVS 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT LI + + L + L E G+ + +++ + + ++ D Sbjct: 121 RDYTHELIAQFAPSKRVLLKGTTELVIEAEHKLSGLPVNMALLREVLADWL--EGEEKPD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL--- 250 +VL CTH+PL+ QL P + +D+ ++A+R LL + + Sbjct: 179 TLVLGCTHFPLLNEEIGQLMPQCM-LIDSGSAVAKRVAWLLNNGGHAAVQSVHIEEVIAR 237 Query: 251 -FLS---GKPDIAMRRLMQGFGLKS 271 + + G+ L Q +GL S Sbjct: 238 AYCTRLDGEAQKLTAPL-QAWGLSS 261 >gi|163786500|ref|ZP_02180948.1| glutamate racemase [Flavobacteriales bacterium ALC-1] gi|159878360|gb|EDP72416.1| glutamate racemase [Flavobacteriales bacterium ALC-1] Length = 261 Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 7/260 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSGIGG + +++ L+P + IY+AD PYGN + + + + Sbjct: 1 MSNTKKPIGIFDSGIGGTSIFKEIIALLPNENCIYLADSKNAPYGNKSEADILQLSIKN- 59 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +++L L V+ACNTA T LR+ + ++F+G PAIK AA TQS I IL+T Sbjct: 60 TELLISKGCKLIVVACNTATTNAISYLRANY-DVSFIGIEPAIKPAALNTQSKSIGILAT 118 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL Y + + +E ++ DE+KK +E Sbjct: 119 KGTLSSHLFHKTTDLYTDGIKVIEQVGEGIVPLIETGL----LESDEMKKLLETYLEPML 174 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247 + D +VL CTHYP ++ + +++ P V +D+ ++A++ + +L + T Sbjct: 175 KQNIDYLVLGCTHYPYLIPMLKKMLPEHVKIIDSGLAVAKQTQAVLATNSLLNTSNAQPA 234 Query: 248 HALFLSGKPDIAMRRLMQGF 267 L+ +G D+ L F Sbjct: 235 INLYSNGDVDVLNSILENEF 254 >gi|260063790|ref|YP_003196870.1| glutamate racemase [Robiginitalea biformata HTCC2501] gi|88783235|gb|EAR14408.1| glutamate racemase [Robiginitalea biformata HTCC2501] Length = 257 Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 122/250 (48%), Gaps = 7/250 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL + ++ L+P H IY+AD PYG A+ + +L++ Sbjct: 2 GVFDSGVGGLTIWHELVRLLPAEHTIYLADSANAPYGGQSPGAILELARKNTRWLLERG- 60 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L V+ACNTA T D LR+ FP + F+G PAIK AA ++SG I +L+T TL + Sbjct: 61 CKLIVVACNTATTNAIDRLRAEFP-VPFIGIEPAIKPAALNSRSGKIGVLATRGTLSSSL 119 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 ++ ++ S I + L R+E + E++ +E + D +V Sbjct: 120 FASTSRNFGSGIEIVEQEGVDLVERIESAGP----DDPELRDILERLLKPMLLQGIDYLV 175 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGK 255 L CTHYPL+ L P V LD +AR++R +L R + H L +G Sbjct: 176 LGCTHYPLLKPTLEHLLPEGVRILDCGLPVARQSRAILEREGLLRDAGGPVRHELLTNGD 235 Query: 256 PDIAMRRLMQ 265 P + + L+Q Sbjct: 236 PGVMRQVLLQ 245 >gi|224825572|ref|ZP_03698677.1| glutamate racemase [Lutiella nitroferrum 2002] gi|224602493|gb|EEG08671.1| glutamate racemase [Lutiella nitroferrum 2002] Length = 266 Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 6/254 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V +++ L+P+ IY+AD PYG + R + ++++ Sbjct: 2 IGMFDSGLGGLSVWRELTRLLPQEPVIYLADRAYCPYGGRSHEDILARSEKITRYLVEQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA + ELR P + +G PA+K AA +++SG I++L+T ATL+ Sbjct: 62 A-RLIVIACNTATSAAARELRRRHPELPIVGMEPAVKPAALHSRSGQIAVLATRATLKGD 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L Y I + VE + ++ ++ +E D + Sbjct: 121 KFLELKAQYDDSVDILPLPGDGFVELVENG----DLASEQAQRVVERQLQPLRAHTVDQV 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFLSG 254 VL CTHYP + + + P V +D + +++ +A LL R H +G Sbjct: 177 VLGCTHYPFLSPLIERALPAGVKLIDPARAVSLQAERLLQRHGLSSPPGTVPAHRFVTTG 236 Query: 255 KPDIAMRRLMQGFG 268 + L Q G Sbjct: 237 EAPGMRHFLRQVLG 250 >gi|260582090|ref|ZP_05849885.1| glutamate racemase [Haemophilus influenzae NT127] gi|260094980|gb|EEW78873.1| glutamate racemase [Haemophilus influenzae NT127] Length = 269 Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 9/270 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIH 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ Sbjct: 57 RTLAACQLINQRYLLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 176 W---ADMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQ 232 Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + P+ + ++ + +G +S Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262 >gi|157883967|pdb|2JFN|A Chain A, Crystal Structure Of Escherichia Coli Glutamate Racemase In Complex With L-Glutamate And Activator Udp-Murnac-Ala Length = 267 Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 141/261 (54%), Gaps = 4/261 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + Sbjct: 1 PRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAV 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T Sbjct: 61 QERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R+YT LI + ++C I ++ S + E G + D +K+ + KE Sbjct: 120 VKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP-- 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PL+ Q+ P +D+ +IARR LL + A Sbjct: 178 PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFC 237 Query: 252 LSGKPD-IAMRRLMQGFGLKS 271 ++ P + ++Q +G ++ Sbjct: 238 MAMTPGAEQLLPVLQRYGFET 258 >gi|15640188|ref|NP_229815.1| glutamate racemase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591662|ref|ZP_01678900.1| glutamate racemase [Vibrio cholerae 2740-80] gi|147673599|ref|YP_001218240.1| glutamate racemase [Vibrio cholerae O395] gi|227080392|ref|YP_002808943.1| glutamate racemase [Vibrio cholerae M66-2] gi|229508432|ref|ZP_04397936.1| glutamate racemase [Vibrio cholerae BX 330286] gi|229508887|ref|ZP_04398377.1| glutamate racemase [Vibrio cholerae B33] gi|229517001|ref|ZP_04406447.1| glutamate racemase [Vibrio cholerae RC9] gi|229606705|ref|YP_002877353.1| glutamate racemase [Vibrio cholerae MJ-1236] gi|254851543|ref|ZP_05240893.1| glutamate racemase [Vibrio cholerae MO10] gi|255743894|ref|ZP_05417849.1| glutamate racemase [Vibrio cholera CIRS 101] gi|262166982|ref|ZP_06034700.1| glutamate racemase [Vibrio cholerae RC27] gi|298501081|ref|ZP_07010881.1| glutamate racemase [Vibrio cholerae MAK 757] gi|11386939|sp|Q9KVI7|MURI_VIBCH RecName: Full=Glutamate racemase gi|172047523|sp|A5F4P4|MURI_VIBC3 RecName: Full=Glutamate racemase gi|254766132|sp|C3LPZ8|MURI_VIBCM RecName: Full=Glutamate racemase gi|9654559|gb|AAF93334.1| glutamate racemase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546478|gb|EAX56698.1| glutamate racemase [Vibrio cholerae 2740-80] gi|146315482|gb|ABQ20021.1| glutamate racemase [Vibrio cholerae O395] gi|227008280|gb|ACP04492.1| glutamate racemase [Vibrio cholerae M66-2] gi|227011822|gb|ACP08032.1| glutamate racemase [Vibrio cholerae O395] gi|229346064|gb|EEO11036.1| glutamate racemase [Vibrio cholerae RC9] gi|229354004|gb|EEO18937.1| glutamate racemase [Vibrio cholerae B33] gi|229354705|gb|EEO19627.1| glutamate racemase [Vibrio cholerae BX 330286] gi|229369360|gb|ACQ59783.1| glutamate racemase [Vibrio cholerae MJ-1236] gi|254847248|gb|EET25662.1| glutamate racemase [Vibrio cholerae MO10] gi|255738377|gb|EET93767.1| glutamate racemase [Vibrio cholera CIRS 101] gi|262024566|gb|EEY43249.1| glutamate racemase [Vibrio cholerae RC27] gi|297540115|gb|EFH76176.1| glutamate racemase [Vibrio cholerae MAK 757] Length = 265 Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E+ ++ DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGI--EQAVGAKQKHRIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNIKLEQLGFN 256 >gi|28378862|ref|NP_785754.1| glutamate racemase [Lactobacillus plantarum WCFS1] gi|254557068|ref|YP_003063485.1| glutamate racemase [Lactobacillus plantarum JDM1] gi|38258032|sp|Q88V19|MURI_LACPL RecName: Full=Glutamate racemase gi|28271699|emb|CAD64605.1| glutamate racemase [Lactobacillus plantarum WCFS1] gi|254045995|gb|ACT62788.1| glutamate racemase [Lactobacillus plantarum JDM1] Length = 273 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 9/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +++I DSG+GGL V+++ +P ++ D PYG ++ + ++ Sbjct: 4 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRTFSFQMADFLM 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K Q + VIACNTA LR S+ +G + P + A + I +++T T Sbjct: 64 AK-QIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + I + + + VE + K+ + + + + Sbjct: 122 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVA----KRVVAETLKQLKKQD 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D +VL CTHYPL+ + + + V +D+ +L ++ R + Sbjct: 178 VDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIANDRSTKRYPDE 237 Query: 250 LFLSGKPDIAMRRLMQGFG 268 + +G D G Sbjct: 238 YYTTGAADQFEAIARNWLG 256 >gi|254502214|ref|ZP_05114365.1| glutamate racemase [Labrenzia alexandrii DFL-11] gi|222438285|gb|EEE44964.1| glutamate racemase [Labrenzia alexandrii DFL-11] Length = 260 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 114/247 (46%), Positives = 160/247 (64%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL VL++ R+L+P +YVADD FP G W + L RL F+ +++ + P VI Sbjct: 1 MGGLTVLREARYLLPCERLLYVADDAAFPIGRWPEEDLLVRLQDQFTRLIEDHDPKAVVI 60 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 ACNTAFTL LR FP + F+G VPAIK AA T SGLIS+L+TP T+RR YT +LI Sbjct: 61 ACNTAFTLGGVALREAFPGVPFVGTVPAIKPAAERTASGLISVLATPGTVRRAYTRSLIE 120 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 S+ +QCH+ LV S LA E++ G + ++ + EI CF+E+ G+RTD++VLACTHY Sbjct: 121 SFAAQCHVRLVGSDNLAELAEQHLRGEPVSDEALLPEISDCFLEQNGQRTDIVVLACTHY 180 Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262 P + + FR+++PWPVDWLD +++IAR+ +L + D A+ SG A+ R Sbjct: 181 PFLANRFRKIAPWPVDWLDPAEAIARQLVRVLGQDLASVPSESPDLAILTSGARKPAIER 240 Query: 263 LMQGFGL 269 L+ GFGL Sbjct: 241 LLAGFGL 247 >gi|228984040|ref|ZP_04144229.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775720|gb|EEM24097.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 284 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 7/258 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 15 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 73 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNT S+ +G + P + A T+ G I ++ T T Sbjct: 74 KQFPLKALVVACNT-AAAAALAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 132 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE +++K+ + + Sbjct: 133 IKSNMYEKALHELDTYLEVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTEED 188 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 189 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 248 Query: 252 LSGKPDIAMRRLMQGFGL 269 +G + G Sbjct: 249 TTGSALSFEHIAERWLGY 266 >gi|227885282|ref|ZP_04003087.1| glutamate racemase [Escherichia coli 83972] gi|300975977|ref|ZP_07173249.1| hypothetical protein HMPREF9531_01194 [Escherichia coli MS 45-1] gi|301048608|ref|ZP_07195621.1| hypothetical protein HMPREF9549_02631 [Escherichia coli MS 185-1] gi|227837734|gb|EEJ48200.1| glutamate racemase [Escherichia coli 83972] gi|300299528|gb|EFJ55913.1| hypothetical protein HMPREF9549_02631 [Escherichia coli MS 185-1] gi|300410167|gb|EFJ93705.1| hypothetical protein HMPREF9531_01194 [Escherichia coli MS 45-1] gi|307556119|gb|ADN48894.1| glutamate racemase [Escherichia coli ABU 83972] gi|312948550|gb|ADR29377.1| glutamate racemase [Escherichia coli O83:H1 str. NRG 857C] gi|315292669|gb|EFU52021.1| hypothetical protein HMPREF9544_02904 [Escherichia coli MS 153-1] gi|320196758|gb|EFW71380.1| Glutamate racemase [Escherichia coli WV_060327] gi|323190167|gb|EFZ75445.1| glutamate racemase [Escherichia coli RN587/1] gi|324006695|gb|EGB75914.1| hypothetical protein HMPREF9532_03634 [Escherichia coli MS 57-2] gi|330908292|gb|EGH36811.1| glutamate racemase [Escherichia coli AA86] Length = 262 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 EAEQLLPVLQRYGFET 254 >gi|191172716|ref|ZP_03034254.1| glutamate racemase [Escherichia coli F11] gi|300986811|ref|ZP_07177801.1| hypothetical protein HMPREF9553_03017 [Escherichia coli MS 200-1] gi|190907020|gb|EDV66621.1| glutamate racemase [Escherichia coli F11] gi|300306388|gb|EFJ60908.1| hypothetical protein HMPREF9553_03017 [Escherichia coli MS 200-1] gi|315289655|gb|EFU49048.1| hypothetical protein HMPREF9539_00329 [Escherichia coli MS 110-3] gi|324012464|gb|EGB81683.1| hypothetical protein HMPREF9533_03508 [Escherichia coli MS 60-1] Length = 262 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 EAEQLLPVLQRYGFET 254 >gi|110597807|ref|ZP_01386090.1| Glutamate racemase [Chlorobium ferrooxidans DSM 13031] gi|110340532|gb|EAT59015.1| Glutamate racemase [Chlorobium ferrooxidans DSM 13031] Length = 272 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 108/258 (41%), Gaps = 8/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I IFDSGIGGL V++ +R +P IY D PYG ++K + I Sbjct: 8 PESPIGIFDSGIGGLTVVKAIRAALPSERLIYFGDTARVPYGPKSQITIRKYAAD-DTAI 66 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130 L +YQP L ++ACNT L D + + + +G + A + A T + I ++ T A Sbjct: 67 LMRYQPKLIIVACNTVSALALDVVEKSCSGIPVIGVLKAGAELAVQVTGNNRIGVIGTQA 126 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + I+ + + + + EE I K E Sbjct: 127 TVCSNAYAREINLLNEESAVVSKACPLFVPLAEEGF----IDHPATKLIAGEYLAEIRKH 182 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-A 249 D +VL CTHYP++ V + + +D+++++A + + LL Sbjct: 183 DIDTLVLGCTHYPILKRVIADIVGPGIRIIDSAEAVALKTKELLTESALLNAAATPSVPH 242 Query: 250 LFLSGKPDIAMRRLMQGF 267 L +S P + L Q F Sbjct: 243 LLVSDLPQKFSQ-LYQLF 259 >gi|56477960|ref|YP_159549.1| glutamate racemase [Aromatoleum aromaticum EbN1] gi|56314003|emb|CAI08648.1| Glutamate racemase (EC 5.1.1.3), gene: MURI OR GLR OR NMA2026 OR NMB0458 [Aromatoleum aromaticum EbN1] Length = 267 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 7/260 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 I +FDSGIGGL V++ + +P H +Y D PYG ++ + Sbjct: 2 NSSRPIGVFDSGIGGLTVVRALMERLPLEHIVYFGDTARVPYGVKSVATIRHFTEQITDF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTP 129 +L + + ++ACNT + + +R S+ L + A QAA A ++S I ++ TP Sbjct: 62 LL-QQDVKMLIVACNTMAAVAAETVRQRAGSIPVLDVIEAGAQAAVAQSRSRGIGVIGTP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ + IH+ S ++ + + VEE + ++ ++ E Sbjct: 121 TTVNSNAYARRIHALDSGARVYSQACPLFVPLVEEGWLDHPVTRLTAQEYLKPVLAE--- 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DH 248 D +VL CTHYPL+ + R + V +D++ + A A L + T + + Sbjct: 178 -EVDSLVLGCTHYPLLKPLLRDVVGPGVRLVDSALTTAELAAAKLHALGLANTHPGEATY 236 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 ++ P + G Sbjct: 237 RFVVTDVPLRFQTIGERFLG 256 >gi|300866341|ref|ZP_07111042.1| Glutamate racemase [Oscillatoria sp. PCC 6506] gi|300335646|emb|CBN56202.1| Glutamate racemase [Oscillatoria sp. PCC 6506] Length = 288 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 99/257 (38%), Gaps = 9/257 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I IFDSG+GGL VL+++ +P +Y D PYG + + + + L Sbjct: 7 QQRIGIFDSGVGGLTVLRELYRQLPGESILYFGDTARLPYGTRSAGEITHFVREIMA-WL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + ++ACNT+ L + +++ F + LG + P + A Q I +++TPAT Sbjct: 66 RSLNVKMVIMACNTSSALALETVQAEF-DIPILGVILPGARAAVQ--QGKRIGVIATPAT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 I + V +E+ +I + + ++ Sbjct: 123 AASNAYRRAILEMDVNSQVWQVGCPEFVPLIEQN----RIYDPYTLEVAREYLAPLIQQQ 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +V CTHYP + V R L V +D + + A L + Sbjct: 179 IDTLVYGCTHYPHLAPVVRSLLHAGVKLVDPAVHVVAAAAQELELLGLRNNGPVMPTRFC 238 Query: 252 LSGKPDIAMRRLMQGFG 268 +SG P+ +Q G Sbjct: 239 VSGCPEQFAELSVQWLG 255 >gi|291523945|emb|CBK89532.1| glutamate racemase [Eubacterium rectale DSM 17629] Length = 258 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 4/231 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++ Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLEQVRALTCEHAKELILN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ Y I + L + VE + D++++ +E D Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 +VL CTHYP + + +++ V D + AR + L Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMKRRLAEKGLLTDSTA 228 >gi|258651923|ref|YP_003201079.1| glutamate racemase [Nakamurella multipartita DSM 44233] gi|258555148|gb|ACV78090.1| glutamate racemase [Nakamurella multipartita DSM 44233] Length = 301 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V + + +P YV D PYG +++ + + ++D Sbjct: 38 APIGIFDSGVGGLTVARAIIDQLPGERVRYVGDTANGPYGPLPIAEVRRHALAVGDRLVD 97 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + VIACNTA + R + PA+++A A T++G + ++ T AT+ Sbjct: 98 SG-VKILVIACNTASAACLADARERYDVPVVEVIRPAVRRAIAATRTGEVGVIGTSATIA 156 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + +H V+ VE + ++ + + D Sbjct: 157 SGAYQDAFD-VNPGVRVHAVACPSFVDFVERGITSGR----QVIGLAQAYLGPLQRTNLD 211 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHALF 251 +VL CTHYPL+ + V + ++D A+ L ++ TR H Sbjct: 212 TLVLGCTHYPLLTGALSLVMGDQVTLVSSADETAKDVYRKLTELDLLAPGTRPSAPHEFL 271 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P + + G Sbjct: 272 ATGDPAPFTKLGRRFLG 288 >gi|308181062|ref|YP_003925190.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046553|gb|ADN99096.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 273 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 9/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +++I DSG+GGL V+++ +P ++ D PYG ++ + ++ Sbjct: 4 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRTFSFQMADFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K Q + VIACNTA LR S+ +G + P + A + I +++T T Sbjct: 64 AK-QIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + I + + + VE + K+ + + + + Sbjct: 122 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVA----KRVVAETLKQLKKQD 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249 D +VL CTHYPL+ + + + V +D+ +L ++ R + Sbjct: 178 VDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIANDRSTKRYPDE 237 Query: 250 LFLSGKPDIAMRRLMQGFG 268 + +G D G Sbjct: 238 YYTTGAADQFEAIARNWLG 256 >gi|332873348|ref|ZP_08441302.1| glutamate racemase [Acinetobacter baumannii 6014059] gi|323519838|gb|ADX94219.1| glutamate racemase [Acinetobacter baumannii TCDC-AB0715] gi|332738411|gb|EGJ69284.1| glutamate racemase [Acinetobacter baumannii 6014059] Length = 266 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 10/268 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNNNSPIGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E E+K ++ Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235 Query: 248 HALFLSGKP----DIAMRRLMQGFGLKS 271 H ++ S P D+ L + +K+ Sbjct: 236 HIIWTSSDPLEVADVTFSLLSEKLSVKA 263 >gi|39934662|ref|NP_946938.1| glutamate racemase [Rhodopseudomonas palustris CGA009] gi|39648512|emb|CAE27033.1| putative glutamate racemase [Rhodopseudomonas palustris CGA009] Length = 264 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 152/257 (59%), Gaps = 4/257 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++ Sbjct: 5 PTILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIA 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + P L VIACNTA T+ LR+ + + F+G VPAIK A A +++ +S+L T AT+R Sbjct: 65 AHAPDLVVIACNTASTMTLAPLRARYR-VPFVGTVPAIKPACAGSRTKRVSVLGTSATVR 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--R 191 YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + K R Sbjct: 124 LEYTRALIRDFAQGCEVSLVGSIRLATLAETALGGGEVTDAAIRAEIAPCFVEADAKRGR 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 TD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F Sbjct: 184 TDAVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGPATGHAP-TPGAEMIF 242 Query: 252 LSGKPDIAMRRLMQGFG 268 SG+ A L FG Sbjct: 243 TSGRHPRASAALAPYFG 259 >gi|213159142|ref|YP_002321140.1| glutamate racemase [Acinetobacter baumannii AB0057] gi|213058302|gb|ACJ43204.1| glutamate racemase [Acinetobacter baumannii AB0057] Length = 266 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 6/249 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T Sbjct: 61 SNLVTQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E E+K +E Sbjct: 120 ATTVKGQKLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----YTAEVKDYLENILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + +++ + ++ S+++ A+ R L ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLNSESPNEGN 235 Query: 248 HALFLSGKP 256 H ++ S P Sbjct: 236 HIIWTSSDP 244 >gi|284928811|ref|YP_003421333.1| glutamate racemase [cyanobacterium UCYN-A] gi|284809270|gb|ADB94975.1| glutamate racemase [cyanobacterium UCYN-A] Length = 281 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 9/256 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL V Q++ L+P+ +Y AD+ PYGN + + + + + + Sbjct: 8 PIGIFDSGVGGLTVFQEIHKLLPQESILYFADNARLPYGNRSSTEILQFVREILNWM-SY 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + ++V+ACNT+ L + +R F + LG V P + A Y+ + ++ST AT + Sbjct: 67 SKVKMAVMACNTSSALALEAVRKEF-NFPILGVVLPGARAATKYSH--RVGVISTLATAK 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + V L +E ++ +KK I K D Sbjct: 124 SDSYRQAIQEINPNIKVWQVGCPELVPLIERDKIYDFHTQEILKKYINPLL----EKNID 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++ CTHY + + + + P+ ++ +D + +A+ + L ++ + + ++ Sbjct: 180 TLIYGCTHYRHLEEIIKNIIPYKIELIDPAYYVAQSVKKELEIMSLRKRSPGFNVRFVVT 239 Query: 254 GKPDIAMRRLMQGFGL 269 G P R + G Sbjct: 240 GSPKNFSRLSKKCLGY 255 >gi|148825723|ref|YP_001290476.1| glutamate racemase [Haemophilus influenzae PittEE] gi|229846914|ref|ZP_04467020.1| glutamate racemase [Haemophilus influenzae 7P49H1] gi|166231037|sp|A5UBE2|MURI_HAEIE RecName: Full=Glutamate racemase gi|148715883|gb|ABQ98093.1| glutamate racemase [Haemophilus influenzae PittEE] gi|229809998|gb|EEP45718.1| glutamate racemase [Haemophilus influenzae 7P49H1] Length = 269 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 5/264 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY E+ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSEREEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AG 178 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D +VL CTH+PLI + P ++D S +IA+R + LL N + Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYNQ 238 Query: 249 ALFLSGKPDIA-MRRLMQGFGLKS 271 + P+ + ++ + +G +S Sbjct: 239 MFCTAHFPEESQFKKALHLWGFES 262 >gi|319776733|ref|YP_004139221.1| glutamate racemase [Haemophilus influenzae F3047] gi|329123156|ref|ZP_08251726.1| glutamate racemase [Haemophilus aegyptius ATCC 11116] gi|317451324|emb|CBY87562.1| glutamate racemase [Haemophilus influenzae F3047] gi|327471711|gb|EGF17153.1| glutamate racemase [Haemophilus aegyptius ATCC 11116] Length = 269 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 9/270 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIH 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ Sbjct: 57 RTLAACQLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSS 175 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232 Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + P+ + ++ + +G +S Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262 >gi|331005029|ref|ZP_08328434.1| Glutamate racemase [gamma proteobacterium IMCC1989] gi|330421157|gb|EGG95418.1| Glutamate racemase [gamma proteobacterium IMCC1989] Length = 273 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 81/246 (32%), Positives = 126/246 (51%), Gaps = 7/246 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL +LQ++R P F Y +D+ FPYG + L +R+ + + Sbjct: 7 ILVFDSGVGGLSILQEIRRQYPHCCFFYASDNAAFPYGTKTEEELIERVDIVLHTLQQTT 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q + V+ACNTA T+ +R F +G VPAIK AAA +QS +I +L+TP T++R Sbjct: 67 QADIIVVACNTASTVALPRIRERFSQ-PVIGVVPAIKPAAALSQSKVIGVLATPGTVKRK 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + C + + + L E+ G I + +++ ++ D + Sbjct: 126 YTQQLIAQFAEDCEVISIGTSELVHLAEQKLRGETITQQQLEPIVQRLI---HNSAIDTV 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDHALFL 252 VLACTH+PL+ + P W+D+ ++IARR L +N D A F Sbjct: 183 VLACTHFPLLKKELQTALPNIKHWIDSGEAIARRVGYWLDTLNIDLGDHASNTDSTAYFT 242 Query: 253 SGKPDI 258 + P+I Sbjct: 243 AQSPNI 248 >gi|90414704|ref|ZP_01222675.1| glutamate racemase [Photobacterium profundum 3TCK] gi|90324246|gb|EAS40821.1| glutamate racemase [Photobacterium profundum 3TCK] Length = 263 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 6/260 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +ILIFDSG+GGL V Q+++ LMP+ +IY D+ FPYG + L +R + + Sbjct: 1 MVKTILIFDSGVGGLSVYQEIQSLMPQIQYIYAFDNAAFPYGELAEDVLLQRTQRIVCSL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +K+ L VIACNTA T++ LR S+ +G VPAIK AA +Q+ +I +L+TPAT Sbjct: 61 AEKHNVDLVVIACNTASTIVLPILRENL-SVPVVGVVPAIKPAAILSQTKVIGLLATPAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R+YT LI S+ S C + ++ S L EE G+ + DEI + I+ K Sbjct: 120 IHRSYTHELISSFASDCEVRMIGSTRLVEIAEEKLRGLPVSIDEIAEIIKPW-----QKD 174 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D I+L CTH+PLI RQ + +D+ +IA R + LL + + + + Sbjct: 175 VDCIILGCTHFPLIKDEIRQALDKAIVIVDSGKAIANRVKGLLGDLPSSYKKHLNLTYNS 234 Query: 252 LSGKPDIAMRRLMQGFGLKS 271 + + A+ R ++ L + Sbjct: 235 AATNNEAALNRSLEKIQLNA 254 >gi|291541513|emb|CBL14623.1| glutamate racemase [Ruminococcus bromii L2-63] Length = 272 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 95/248 (38%), Gaps = 4/248 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q++I +FDSG+GGL +++ ++P IY D PYGN + K + + +L Sbjct: 4 QDAIGVFDSGLGGLSAVKEFLHVLPNEKIIYFGDTGRVPYGNRSRETISKYALQDANFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K+ V AC T ++ D L P A T++G I I+ T AT+ Sbjct: 64 -KHNVKTVVAACGTVSSVAGDMLEEKLSVPYTGVVNPTAFIADQKTKNGKIGIIGTAATI 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + ++ + + VE + ++ I E + Sbjct: 123 SSHSYKLRLEKLNPKYKVYEQACPLFVPLVENGFICR--DDQIVRLVIRRYLSELKETGV 180 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251 D ++L CTHYPL+ V +D+ A +L N T V + Sbjct: 181 DTLILGCTHYPLLRDAIADFMGDGVTLVDSGYETAIYCSKILRENNLLNTDGVHQTPEFY 240 Query: 252 LSGKPDIA 259 +S PD Sbjct: 241 VSDTPDGF 248 >gi|229195184|ref|ZP_04321959.1| Glutamate racemase [Bacillus cereus m1293] gi|228588413|gb|EEK46456.1| Glutamate racemase [Bacillus cereus m1293] Length = 284 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 7/258 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 15 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 73 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNT S+ +G + P + A T+ G I ++ T T Sbjct: 74 KQFPLKALVVACNT-AAAAALAALQEALSVPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 132 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE +++K+ + + Sbjct: 133 IKSNMYEKALHELDTYLEVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTEED 188 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 189 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 248 Query: 252 LSGKPDIAMRRLMQGFGL 269 +G + G Sbjct: 249 TTGSALSFEHIAERWLGY 266 >gi|86739585|ref|YP_479985.1| glutamate racemase [Frankia sp. CcI3] gi|86566447|gb|ABD10256.1| glutamate racemase [Frankia sp. CcI3] Length = 300 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 104/257 (40%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL V + + +P +Y+ D PYG +++ + ++D Sbjct: 4 APIGVFDSGVGGLTVARAILDQLPHEPLMYLGDTARAPYGPRRIAEVRRYALDALDRLVD 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA + R + +PA ++AAA T+SG + ++ T AT+ Sbjct: 64 EG-VKLLVIACNTASAACLRDARERYDIPVIEVIMPATRRAAAATRSGRVGVIGTLATIA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + + + VE + ++ E + D Sbjct: 123 SRAYDDAFTA-AAGVELTGAACPAFVDFVERGITCGR----QLLGLTEAYLAPLQEANVD 177 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALF 251 ++L CTHYPL+ V + V + +++ A+ +L R + H Sbjct: 178 TVILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLVRHGLFRDPDLPPPTHRFL 237 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P + R + G Sbjct: 238 TTGDPTLFSRVGRRFLG 254 >gi|156935905|ref|YP_001439821.1| glutamate racemase [Cronobacter sakazakii ATCC BAA-894] gi|156534159|gb|ABU78985.1| hypothetical protein ESA_03799 [Cronobacter sakazakii ATCC BAA-894] Length = 253 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 132/249 (53%), Gaps = 4/249 (1%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y L+VI Sbjct: 1 MGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVEIVTAVQARYPLALAVI 60 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 ACN+A T+ LR F + +G VPAIK AA T +G++ +L+T T++R YT LI Sbjct: 61 ACNSASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGMVGLLATRGTVKRPYTHELIA 119 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 + ++C I ++ S L E G + + +++ + E D +VL CTH+ Sbjct: 120 RFANECQIEMLGSAELVEIAEAKLHGEPVSLEALRRVLRPWLRMPEP--PDTVVLGCTHF 177 Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA-MR 261 PL+ Q+ P +D+ +IARR LL ++ A ++ P++A + Sbjct: 178 PLLAEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDACSSDENIAYCMALTPEVAQLM 237 Query: 262 RLMQGFGLK 270 ++Q +G Sbjct: 238 SVLQRYGFN 246 >gi|299768328|ref|YP_003730354.1| glutamate racemase [Acinetobacter sp. DR1] gi|298698416|gb|ADI88981.1| glutamate racemase [Acinetobacter sp. DR1] Length = 266 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 6/249 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E +E+K +E Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTEEVKDYLENILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYKLSSESPNEGN 235 Query: 248 HALFLSGKP 256 H ++ S P Sbjct: 236 HIIWTSSDP 244 >gi|312965372|ref|ZP_07779605.1| glutamate racemase [Escherichia coli 2362-75] gi|312290046|gb|EFR17933.1| glutamate racemase [Escherichia coli 2362-75] Length = 262 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 137/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQKRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + + C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANACQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 EAEQLLPVLQRYGFET 254 >gi|221198503|ref|ZP_03571549.1| glutamate racemase [Burkholderia multivorans CGD2M] gi|221208547|ref|ZP_03581548.1| glutamate racemase [Burkholderia multivorans CGD2] gi|221171538|gb|EEE03984.1| glutamate racemase [Burkholderia multivorans CGD2] gi|221182435|gb|EEE14836.1| glutamate racemase [Burkholderia multivorans CGD2M] Length = 292 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 114/264 (43%), Gaps = 15/264 (5%) Query: 1 MKIDNYPCEKKLQN-------SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 M + P + I IFDSG+GGL VL+ +R +P F+YVAD PYG Sbjct: 1 MTMTISPSAAEAHRTASAAAAPIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYG 60 Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 +D + +R + + ++++ L V+ACNTA +R ++ +G P IK Sbjct: 61 ERDDAFITERTLAIGEWLVEQRAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKP 118 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 A + SG++ +L+T ATLR L+ + + C L VE G Sbjct: 119 AVEQSASGVVGVLATQATLRSARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----S 174 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 ++ ++G D IVL CTHYP + R L + +D SD+IAR+ + Sbjct: 175 PALRALLDGYLKPMLDAGADTIVLGCTHYPFLTTAIRGLIGERMTIVDTSDAIARQLARV 234 Query: 234 LPRIN--THQTRVFDDHALFLSGK 255 L + T +G Sbjct: 235 LEQHGLRTPAGMPAAAPRFCSTGD 258 >gi|260913044|ref|ZP_05919526.1| glutamate racemase [Pasteurella dagmatis ATCC 43325] gi|260632631|gb|EEX50800.1| glutamate racemase [Pasteurella dagmatis ATCC 43325] Length = 269 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 82/259 (31%), Positives = 139/259 (53%), Gaps = 5/259 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +IL FDSG+GG V ++ + L+P H++Y D+ FPY + + +R++ + DI Sbjct: 6 QPTILFFDSGMGGFSVYKETKQLLPNCHYLYCFDNAFFPYSEKTEKKIIERVLMICQDIN 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 KY L VIACNTA T++ LR+ F S+ +G VPAIK AA ++++ I +L+T T+ Sbjct: 66 SKYPLDLIVIACNTASTVVLPSLRAHF-SIPIVGTVPAIKPAAEHSETKHIGLLATKGTV 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R+Y +NLI Y C + + S L E+ G + +K+E++ + Sbjct: 125 KRSYVANLISQYAGDCIVEKIGSTKLVEIAEQKLHGKAVDLVALKEELKLW---ENIVDL 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV+VL CTH+PLI P ++D+ +IA R + LL +I ++ + Sbjct: 182 DVVVLGCTHFPLIKEEIEWCLPQVRLFIDSGKAIALRVKHLLSKIEVRSKKMEKNLIFCT 241 Query: 253 -SGKPDIAMRRLMQGFGLK 270 S ++ +R++ +G + Sbjct: 242 QSFDDEVDFQRVLNFWGFE 260 >gi|188996911|ref|YP_001931162.1| glutamate racemase [Sulfurihydrogenibium sp. YO3AOP1] gi|229486280|sp|B2V9I5|MURI_SULSY RecName: Full=Glutamate racemase gi|188931978|gb|ACD66608.1| glutamate racemase [Sulfurihydrogenibium sp. YO3AOP1] Length = 260 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 12/248 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSGIGGL V +++ P+ Y+ D PYGN + + + S + Sbjct: 2 PIGIFDSGIGGLTVFKEIAASFPKVDLYYLGDTARVPYGNKSKTTIIRYSVECASYLYHN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 Y VIACNTA + D LR P + +G V P + A +++ I ++ T AT++ Sbjct: 62 YNVDAIVIACNTASSYALDTLREILP-IPVIGVVQPGAESAVKVSKNKKIGVIGTSATIK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + S I+ + + VEE ++ + +K+ ++ + D Sbjct: 121 SNSYFETLKSLDKDLEIYQKACPLFVPLVEEGWIDNEVAKLTVKEYLD----DLVKTGID 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L CTHYPL+ + + L P ++ +D+S +I + + ++N +T +F++ Sbjct: 177 TLILGCTHYPLLKNTIKGLYP-HLNIVDSSVAIVEHLKNI--KLNIEET---GKRKIFIT 230 Query: 254 GKPDIAMR 261 + + Sbjct: 231 DESHAFDK 238 >gi|145633451|ref|ZP_01789181.1| glutamate racemase [Haemophilus influenzae 3655] gi|229845418|ref|ZP_04465548.1| glutamate racemase [Haemophilus influenzae 6P18H1] gi|144986014|gb|EDJ92616.1| glutamate racemase [Haemophilus influenzae 3655] gi|229811614|gb|EEP47313.1| glutamate racemase [Haemophilus influenzae 6P18H1] Length = 269 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIH 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKSASEITKTKH 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 116 IGLLATKGTVKRHYVDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 176 W---AGTADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232 Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + P+ + ++ + +G +S Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262 >gi|297544101|ref|YP_003676403.1| glutamate racemase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841876|gb|ADH60392.1| glutamate racemase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 264 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 8/255 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + + + Sbjct: 4 RPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMRE 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + VIACNT +I +S + + F + AA YT + I +++T T+ Sbjct: 64 QK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVE 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I ++ + +E+ I + C E + D Sbjct: 120 SKSYEKNIKIIDKNIKVYQKACPEFVPLIEKGLYNSPIAFET----ASNCLKELRERDID 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYPL++ V ++ V +D + +A + L R + + F+S Sbjct: 176 TLVLGCTHYPLMMEVIEEIVGENVKIVDPAIKLAYDVKDYLLRRDLFNIQNIGKTKFFVS 235 Query: 254 GKPDIAMRRLMQGFG 268 G D ++ G Sbjct: 236 GDKDNFIKTAEMLLG 250 >gi|309972870|gb|ADO96071.1| Glutamate racemase [Haemophilus influenzae R2846] Length = 269 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 131/264 (49%), Gaps = 5/264 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QIINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AG 178 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D +VL CTH+PLI + P ++D S +IA+R + LL N + Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYNQ 238 Query: 249 ALFLSGKPDIA-MRRLMQGFGLKS 271 + P+ + ++ + +G +S Sbjct: 239 MFCTAHFPEESQFKKALHLWGFES 262 >gi|258626053|ref|ZP_05720908.1| glutamate racemase [Vibrio mimicus VM603] gi|258581673|gb|EEW06567.1| glutamate racemase [Vibrio mimicus VM603] Length = 265 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDALVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E++ + DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELENILHPL-----KHTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGI--DKGEGENQKHHIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNIKLKELGFN 256 >gi|146313651|ref|YP_001178725.1| glutamate racemase [Enterobacter sp. 638] gi|145320527|gb|ABP62674.1| glutamate racemase [Enterobacter sp. 638] Length = 283 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 84/272 (30%), Positives = 145/272 (53%), Gaps = 8/272 (2%) Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEDFI 68 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + + + +Y L+VIACNTA T+ LR FP +G VPAIK AA T + Sbjct: 69 VERVVEIVTAVQARYPLALAVIACNTASTVSLPSLREKFP-FPVVGVVPAIKPAARLTAN 127 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ + Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECKIAMLGSAELVEMAEAKLHGEPVSLEELRRIL 187 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + D +VL CTH+PL+ ++ P +D+ +IARR LL Sbjct: 188 GPWL--RMAEPPDTVVLGCTHFPLLQEELLEVLPEGTRLVDSGAAIARRTAWLLEHEAPE 245 Query: 241 QTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271 + A ++ P+ + ++Q +G ++ Sbjct: 246 AKSSDKNIAFCMALTPETEQLLPVLQRYGFET 277 >gi|42780015|ref|NP_977262.1| glutamate racemase [Bacillus cereus ATCC 10987] gi|42735933|gb|AAS39870.1| glutamate racemase [Bacillus cereus ATCC 10987] Length = 275 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAAALTALQKAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE +++K+ + + Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGENVTIISSAEETAIELSTILQHKGILSDNLNPVHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259 >gi|192290178|ref|YP_001990783.1| glutamate racemase [Rhodopseudomonas palustris TIE-1] gi|192283927|gb|ACF00308.1| glutamate racemase [Rhodopseudomonas palustris TIE-1] Length = 264 Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 103/257 (40%), Positives = 151/257 (58%), Gaps = 4/257 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++ Sbjct: 5 PTILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIA 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + P L VIACNTA T+ LR+ + + F+G VPAIK A +++ +S+L T AT+R Sbjct: 65 AHAPDLVVIACNTASTMTLAPLRARYR-VPFVGTVPAIKPACTGSRTKRVSVLGTSATVR 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--R 191 YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + K R Sbjct: 124 LEYTRALIRDFAQGCEVSLVGSIRLATLAETALGGGEVTDAAIRAEIAPCFVEADAKRGR 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 TD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F Sbjct: 184 TDAVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGPATGHAP-TPGAEMIF 242 Query: 252 LSGKPDIAMRRLMQGFG 268 SG+ A L FG Sbjct: 243 TSGRHPRASAALAPYFG 259 >gi|227510206|ref|ZP_03940255.1| glutamate racemase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190411|gb|EEI70478.1| glutamate racemase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 264 Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 9/253 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL VL+++ ++P +I+V D PYG ++K + +L K Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRKLTKRIADYML-KQNVK 59 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNT+ D L+ P + +G + P + A A T + I +++T T+ Sbjct: 60 MFVIACNTSTAASLDYLKKILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVNSGVY 118 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +I S + ++ + + VE G ++ +++ ++ K D +VL Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQLAY----FHDKPIDTLVL 174 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--ALFLSGK 255 CTH+P++ + ++ +D S A+ L + + + F +G Sbjct: 175 GCTHFPVLETEIKDAVNSGINLIDPGISTAKNVADYLRSHHQMRDSSQSPQIKSFFTTGN 234 Query: 256 PDIAMRRLMQGFG 268 + + Q G Sbjct: 235 QNEFTKIADQLLG 247 >gi|315298482|gb|EFU57737.1| hypothetical protein HMPREF9545_02463 [Escherichia coli MS 16-3] Length = 262 Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+S +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSSAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 EAEQLLPVLQRYGFET 254 >gi|197336453|ref|YP_002157219.1| glutamate racemase [Vibrio fischeri MJ11] gi|226707593|sp|B5FCA3|MURI_VIBFM RecName: Full=Glutamate racemase gi|197317943|gb|ACH67390.1| glutamate racemase [Vibrio fischeri MJ11] Length = 261 Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 11/256 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ILIFDSGIGGL V +++++ +P +IY D+ FPYG + L +R + S++ Sbjct: 1 MPKHILIFDSGIGGLSVYKEIKYQLPLAKYIYAFDNAAFPYGELTESVLIERTTHIISEL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA T++ LR + +G VPAIK AA + I +L+TPAT Sbjct: 61 CSQFPIDIVVIACNTASTVVLPSLRDKL-DIPVVGVVPAIKPAALVS--NKIGLLATPAT 117 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R+YT +LI S+ + L+ S L EE GI + K+++ + Sbjct: 118 VKRSYTYDLIKSFAPISDVQLLGSTRLVEMAEEKMIGIDVDMRA-KRDLSPW-----QNK 171 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D IVL CTH+P + + ++ + +D+ ++IARR + LL +F+ Sbjct: 172 VDTIVLGCTHFPFLKNEIKKALGNKILLIDSGEAIARRVKQLLNGDGVESAVLFEGEVFC 231 Query: 252 LSGKPDIAMRRLMQGF 267 P I L F Sbjct: 232 --SAPSIKEEALNHTF 245 >gi|257791702|ref|YP_003182308.1| glutamate racemase [Eggerthella lenta DSM 2243] gi|257475599|gb|ACV55919.1| glutamate racemase [Eggerthella lenta DSM 2243] Length = 303 Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 96/263 (36%), Gaps = 15/263 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG GGL V +++ +P +Y+ D PYG + + + + ++ Sbjct: 21 NAPIGVFDSGFGGLTVAREIAKELPRESIVYLGDSARCPYGPRSLDEVDGFVQQIGAWLV 80 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L VIACNTA + TFP P + AA T++ + +++T AT+ Sbjct: 81 ERG-VKLVVIACNTATAAGLSHAQRTFPVPVIGVVEPGARAAAHATKNRRVGVIATKATV 139 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------------EDEIKKE 179 + I + + ++ E+ + ++ Sbjct: 140 ESDAYTKAIRHLDAGITVFSTATPRFVEIAEQGLRMAEGPIEDFTSLVSTVYIRPAFQEI 199 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 D +VL CTH+PL+ + + V + ++ A +L R Sbjct: 200 AREYLEPLRRCDIDTLVLGCTHFPLLKALIGGVVGRDVTLISSAQEAAHDVAHILSRRGA 259 Query: 240 HQTRVF-DDHALFLSGKPDIAMR 261 + + + +G+ R Sbjct: 260 LASEDHEPSYDFYTTGEDVEEFR 282 >gi|146299447|ref|YP_001194038.1| glutamate racemase [Flavobacterium johnsoniae UW101] gi|146153865|gb|ABQ04719.1| glutamate racemase [Flavobacterium johnsoniae UW101] Length = 259 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 8/256 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I +FDSGIGG + + L+P IY+AD PYG + +L Sbjct: 4 NNPIGVFDSGIGGTSIWSAIHDLLPNEKTIYLADSKNAPYGQKTKEEIVALSKKNVEFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA T ELR+ + + F+G PAIK AA +++ +I IL+T TL Sbjct: 64 E-NNCKLIVVACNTATTNAIRELRNDY-DIPFIGIEPAIKPAATNSRTQVIGILATKGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + I L +E+ + E+ + +E Sbjct: 122 NSELFNKTAEMF-QHTTIIEQVGYGLVQLIEDG----NLNSPEMTQLLESYLQPMIDANI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALF 251 D +VL C+HYP ++ +++ P + +D+ +++AR+ + +L + + D + Sbjct: 177 DYLVLGCSHYPYLIPQIKKILPDHIQIIDSGEAVARQTQNVLREKAGFTDGKNNSDPVFY 236 Query: 252 LSGKPDIAMRRLMQGF 267 ++ P + L + Sbjct: 237 VNSNPAVLKSILENKY 252 >gi|49476942|ref|YP_035099.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328498|gb|AAT59144.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 276 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA T L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAATATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTEED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSALSFEHIAERWLGYQ 259 >gi|170022021|ref|YP_001726975.1| glutamate racemase [Escherichia coli ATCC 8739] gi|194438347|ref|ZP_03070438.1| glutamate racemase [Escherichia coli 101-1] gi|297521937|ref|ZP_06940323.1| glutamate racemase [Escherichia coli OP50] gi|300916976|ref|ZP_07133674.1| hypothetical protein HMPREF9540_00832 [Escherichia coli MS 115-1] gi|300928750|ref|ZP_07144266.1| hypothetical protein HMPREF9550_01102 [Escherichia coli MS 187-1] gi|300948244|ref|ZP_07162363.1| hypothetical protein HMPREF9541_01786 [Escherichia coli MS 116-1] gi|300954723|ref|ZP_07167157.1| hypothetical protein HMPREF9547_00648 [Escherichia coli MS 175-1] gi|301024176|ref|ZP_07187885.1| hypothetical protein HMPREF9551_02242 [Escherichia coli MS 196-1] gi|301645164|ref|ZP_07245121.1| hypothetical protein HMPREF9543_01787 [Escherichia coli MS 146-1] gi|312971739|ref|ZP_07785913.1| glutamate racemase [Escherichia coli 1827-70] gi|169756949|gb|ACA79648.1| glutamate racemase [Escherichia coli ATCC 8739] gi|194422784|gb|EDX38780.1| glutamate racemase [Escherichia coli 101-1] gi|299880535|gb|EFI88746.1| hypothetical protein HMPREF9551_02242 [Escherichia coli MS 196-1] gi|300318304|gb|EFJ68088.1| hypothetical protein HMPREF9547_00648 [Escherichia coli MS 175-1] gi|300415728|gb|EFJ99038.1| hypothetical protein HMPREF9540_00832 [Escherichia coli MS 115-1] gi|300452222|gb|EFK15842.1| hypothetical protein HMPREF9541_01786 [Escherichia coli MS 116-1] gi|300463275|gb|EFK26768.1| hypothetical protein HMPREF9550_01102 [Escherichia coli MS 187-1] gi|301076543|gb|EFK91349.1| hypothetical protein HMPREF9543_01787 [Escherichia coli MS 146-1] gi|310334116|gb|EFQ00321.1| glutamate racemase [Escherichia coli 1827-70] gi|315617764|gb|EFU98369.1| glutamate racemase [Escherichia coli 3431] Length = 262 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + ++Q +G ++ Sbjct: 239 GAEQLLPVLQRYGFET 254 >gi|300789525|ref|YP_003769816.1| glutamate racemase [Amycolatopsis mediterranei U32] gi|299799039|gb|ADJ49414.1| glutamate racemase [Amycolatopsis mediterranei U32] Length = 257 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 99/253 (39%), Gaps = 7/253 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P YV D PYG + + ++++ Sbjct: 1 MFDSGVGGLTVARAILEQLPAEQLRYVGDTAHNPYGPLPIATARSYALAALDELVESGVK 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L VIACNTA + R + +PA+++A T +G + ++ T T+R Sbjct: 61 AL-VIACNTASAACLRDARERYDVPVIEVVLPAVRRAVVATHTGRVGVIGTEGTVRSRAY 119 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + + V+ VE ++ +G + D +VL Sbjct: 120 EDAFAA-APAITLTSVACPRFVDFVERGIT----TGRQVLGLAQGYLQPLLDAQVDTLVL 174 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFLSGKP 256 CTHYPL+ V + + V + ++D A+ +L + TR H +G Sbjct: 175 GCTHYPLLQGVLQIVMGQEVTLVSSADETAKDLVRVLTEGDLLTTRDTPPRHEFLATGSA 234 Query: 257 DIAMRRLMQGFGL 269 + R + G Sbjct: 235 EPFTRLAQRFMGF 247 >gi|150003444|ref|YP_001298188.1| glutamate racemase [Bacteroides vulgatus ATCC 8482] gi|254881258|ref|ZP_05253968.1| glutamate racemase [Bacteroides sp. 4_3_47FAA] gi|294777674|ref|ZP_06743125.1| glutamate racemase [Bacteroides vulgatus PC510] gi|319640260|ref|ZP_07994985.1| glutamate racemase [Bacteroides sp. 3_1_40A] gi|149931868|gb|ABR38566.1| glutamate racemase [Bacteroides vulgatus ATCC 8482] gi|254834051|gb|EET14360.1| glutamate racemase [Bacteroides sp. 4_3_47FAA] gi|294448742|gb|EFG17291.1| glutamate racemase [Bacteroides vulgatus PC510] gi|317388035|gb|EFV68889.1| glutamate racemase [Bacteroides sp. 3_1_40A] Length = 281 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 11/270 (4%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + + Sbjct: 3 PSILPSTGPIGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQ 62 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRS-TFPSM----AFLGAV-PAIKQAAAYTQS 120 S + + P L ++ACNTA ++ P + LG + P + T+S Sbjct: 63 AVSKLFELGCP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRS 121 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + IL+T T++ IH + + + S VE + + +K+ I Sbjct: 122 RHVGILATAGTIKSESYLLEIHKLSPDIVVTGEACPMWVSLVENNEYQSEGADYFVKQHI 181 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + D I+L CTHYPL++ RQ +P P+ + + +AR R L R Sbjct: 182 NRLL--DKDPMIDTIILGCTHYPLLLDKIRQFTPEPIRIISQGEYVARSLRDYLNRHPEM 239 Query: 241 QTR--VFDDHALFLSGKPDIAMRRLMQGFG 268 R + + + G Sbjct: 240 DARCDKGGNCRFLTTESENKFEESASIFLG 269 >gi|168185800|ref|ZP_02620435.1| glutamate racemase [Clostridium botulinum C str. Eklund] gi|169295922|gb|EDS78055.1| glutamate racemase [Clostridium botulinum C str. Eklund] Length = 259 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 7/257 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I FDSG+GGL VL++ ++P FIY D PYG +KK +L+ Sbjct: 7 PIGFFDSGVGGLSVLREAIKILPNEDFIYFGDSKNAPYGTKTVDEVKKLTFNAVEFLLE- 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA + ++LR+++ + +G PA+K A + G I I++TP TL Sbjct: 66 HNVKAIVIACNTATSAAIEDLRNSYKDIPIIGIEPALKPAVELHKKGKIVIMATPMTLAE 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + L+ Y + + + L VE+ +K EI + + + K Sbjct: 126 KKFNKLMEKYKGKSEMVSLPCPGLVEYVEKGI----VKGQEINRFLLEKLSVIDKKEISS 181 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLS 253 +VL CTHYP I ++ V +D S + + + L + N+ +F S Sbjct: 182 VVLGCTHYPFIKEELSKILGEDVVIIDGSVGTSIQLKRKLIKDNSLNLEDKKGTVKIFNS 241 Query: 254 -GKPDIAMRRLMQGFGL 269 D + + G+ Sbjct: 242 LDDNDEVIGISKKLLGI 258 >gi|264677499|ref|YP_003277405.1| glutamate racemase [Comamonas testosteroni CNB-2] gi|262208011|gb|ACY32109.1| glutamate racemase [Comamonas testosteroni CNB-2] Length = 298 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 123/276 (44%), Gaps = 18/276 (6%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFL 67 + I IFDSG+GGL VLQ +R +P F+Y+AD PYG+ D +++R + + Sbjct: 1 MPTPHSPIGIFDSGVGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +L+++ + VIACNTA + LR P + +G PAIK A+ +Q+ + +++ Sbjct: 61 AKYLLEQHDIKILVIACNTATAAAVELLRERLPQLPVIGVEPAIKPASFSSQTHHVGVMA 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCF 184 T T+ + L+ + + HL + LA +E E A EI+ Sbjct: 121 TRGTISSQRVARLVSEHGQRAEFHLQACDGLARAIEQSTEQALPEDASATEIRALCAKYT 180 Query: 185 IE-----KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + D +VL CTHY + R L + LD +AR+ R +L + N Sbjct: 181 SALGSFGLKTGQMDTLVLGCTHYVFVKDDLRALLGPDIQLLDTGAPVARQTRRMLEQRNL 240 Query: 240 HQTRV--------FDDHALFLSGKPDIAMRRLMQGF 267 D L +G+ AM+ Q + Sbjct: 241 LGAETDGSLQLAQADQIQLMTTGRL-TAMQAAAQRW 275 >gi|68250338|ref|YP_249450.1| glutamate racemase [Haemophilus influenzae 86-028NP] gi|81335242|sp|Q4QJK7|MURI_HAEI8 RecName: Full=Glutamate racemase gi|68058537|gb|AAX88790.1| glutamate racemase [Haemophilus influenzae 86-028NP] Length = 269 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIH 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-EIPIIGTVPAIKPASEITKTKH 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSS 175 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQ 232 Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + P+ + ++ + +G +S Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262 >gi|299142407|ref|ZP_07035539.1| glutamate racemase [Prevotella oris C735] gi|298576129|gb|EFI48003.1| glutamate racemase [Prevotella oris C735] Length = 278 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 101/263 (38%), Gaps = 11/263 (4%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + + Sbjct: 2 PMFPEKPGPIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQ 61 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 + + L ++ CNTA +L + PS LG + P + T++ Sbjct: 62 AVMKLFE-LGCHLVILGCNTASAKALRSIQRNDLPNLDPSRRVLGVIRPTAEIIGTLTKN 120 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L+T T++ I + + V+ VE + +KK I Sbjct: 121 NHVGLLATEGTVKSHSYDLEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRI 180 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-- 238 + + D I+L CTHYP+++ + V + + +A + L R Sbjct: 181 DELMLH--DPDIDTIILGCTHYPILMPKIVKYVRPGVRIVPQGEYVAGSLQDYLRRHTDM 238 Query: 239 THQTRVFDDHALFLSGKPDIAMR 261 HQ + P+ Sbjct: 239 EHQLTQGGSCRYLTTENPERFKE 261 >gi|269961492|ref|ZP_06175855.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833721|gb|EEZ87817.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 268 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 133/260 (51%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P ++Y+ D+ +PYG + L R+ L + ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPHMDYLYLFDNEAYPYGELDQDVLITRVNKLVAALV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA T++ LR+ S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 EEHQADIVVIACNTASTIVLPSLRANL-SIPVVGVVPAIKPASLLASQG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + L+ S L EE G I E++ + + Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESISLPELESILLPL-----RNKV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV VL CTH+PLI Q V +D+ ++IARR + LL +++ ++ Sbjct: 179 DVAVLGCTHFPLIKDEIHQALGGEVTLVDSGEAIARRVKALLTSDMKEESKEEGSKKIYA 238 Query: 253 SGKP--DIAMRRLMQGFGLK 270 S P + A+ + G Sbjct: 239 SAPPWQEDALNTCLANLGFN 258 >gi|225850547|ref|YP_002730781.1| glutamate racemase [Persephonella marina EX-H1] gi|254766121|sp|C0QQ35|MURI_PERMH RecName: Full=Glutamate racemase gi|225646550|gb|ACO04736.1| glutamate racemase [Persephonella marina EX-H1] Length = 259 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 13/243 (5%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI IFDSG+GGL V +++ P Y+ D PYGN + + + + + Sbjct: 2 SIGIFDSGVGGLTVFREIDREFPFADIYYLGDTARVPYGNKSKETIIRYSLECANYLYS- 60 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + ++ACNTA + + LR +F + +G + P ++ A T++G I ++ T AT++ Sbjct: 61 FGIDALIVACNTASSYAIEALRESF-DIPVIGVIKPGVELAVKTTKNGRIGVIGTQATIK 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I ++ + VEE KI E +K+ ++ + K D Sbjct: 120 SGSYRTEIEKK-GDFTVYQKPCPLFVPLVEEGLIDHKITELTVKEYLD----DIVSKGID 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L CTHYPL+ V +++ P ++ +D+S + A L + N + Sbjct: 175 TLILGCTHYPLLKDVIKKIYP-HLNIIDSSKATA----LYLKKKNLDLNGTGERKIFITD 229 Query: 254 GKP 256 P Sbjct: 230 ESP 232 >gi|289549102|ref|YP_003474090.1| glutamate racemase [Thermocrinis albus DSM 14484] gi|289182719|gb|ADC89963.1| glutamate racemase [Thermocrinis albus DSM 14484] Length = 255 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 13/241 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL+ +R P+ +Y+ D PYG+ +++ + +L + Sbjct: 3 IGVFDSGIGGLTVLKAIRERYPKVDLLYLGDTARVPYGSKSKETVQRYSIECAEFLL-GH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA D LR P F P +++A SG + ++ T T+ Sbjct: 62 DVDLVVVACNTASAYALDLLRERLPVEVFGVIEPGVEEALRVCTSGKVGVIGTRGTISSG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NL+ + + + VEE + E + E + + D + Sbjct: 122 AYQNLLQK--KGVKVLAKACPLFVPLVEEGMVRGPVAELLV----EHYLKDLKESGIDTL 175 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +L CTHYPL+ V + V +D++ + AR + + F Sbjct: 176 ILGCTHYPLLKDVIQAYMDGTV-IVDSAHATARWIERYVKDEGNSSLSL-----YFTDDS 229 Query: 256 P 256 P Sbjct: 230 P 230 >gi|187732533|ref|YP_001882660.1| glutamate racemase [Shigella boydii CDC 3083-94] gi|187429525|gb|ACD08799.1| glutamate racemase [Shigella boydii CDC 3083-94] Length = 262 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 138/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T + ++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANSIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G ++ Sbjct: 239 EAEQLLPVLQRYGFET 254 >gi|118445076|ref|YP_879120.1| glutamate racemase [Clostridium novyi NT] gi|166231036|sp|A0Q3B8|MURI_CLONN RecName: Full=Glutamate racemase gi|118135532|gb|ABK62576.1| glutamate racemase [Clostridium novyi NT] Length = 259 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 7/257 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I FDSG+GGL VL++ ++P FIY D PYG +KK +L Sbjct: 7 PIGFFDSGVGGLSVLREAIKVLPNEDFIYFGDSKNAPYGTKTVDEVKKLTFNAVEFLL-G 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA + ++LR+++ + +G PA+K A + G I +++TP TL Sbjct: 66 HNVKAVVIACNTATSAAIEDLRNSYKDIPIIGIEPALKPAVELNKKGKIVVMATPMTLAE 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 ++L+ Y + + + L VE+ +K E+ ++ + K Sbjct: 126 KKFNDLMAKYKGRSEMVSLPCPGLVEYVEKGI----VKGQELNNYLQKKLSIIDKKEISS 181 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLS 253 +VL CTHYP I ++ V +D S + + + L + + + +F S Sbjct: 182 VVLGCTHYPFIKEELSKILGEDVVIIDGSLGTSIQLKRKLIKNKSLNLQDKKGTVKIFNS 241 Query: 254 -GKPDIAMRRLMQGFGL 269 + ++ + G+ Sbjct: 242 LDNNEEIIKISKKLLGI 258 >gi|167764308|ref|ZP_02436435.1| hypothetical protein BACSTE_02693 [Bacteroides stercoris ATCC 43183] gi|167698424|gb|EDS15003.1| hypothetical protein BACSTE_02693 [Bacteroides stercoris ATCC 43183] Length = 279 Score = 277 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARAPYGTRSFEVVYEFTLQAVTKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P+ LG + P ++ T+S + +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPHLDPARRVLGVIRPTVECIGNITRSRHVGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + + + S VE + ++K I Sbjct: 129 TGGTIKSESYPLEIHKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFVRKYINELLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVF 245 + + D +L CTHYP+++ R+ P + + +A + L R Q Sbjct: 187 KDREIDTAILGCTHYPILLPKIRKYMPESITIVSQGKLVADSLKDYLHRHPEIDAQCTQN 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + D Sbjct: 247 GKCSYYTTEAEDKFTE 262 >gi|229177385|ref|ZP_04304768.1| Glutamate racemase [Bacillus cereus 172560W] gi|228606108|gb|EEK63546.1| Glutamate racemase [Bacillus cereus 172560W] Length = 284 Score = 277 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 102/259 (39%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 15 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 73 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNT S+ +G + P + A T+ G I ++ T T Sbjct: 74 KQFPLKALVVACNT-AAAAALNALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 132 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 133 IKSNMYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLMKED 188 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ + + +++ A +L + H F Sbjct: 189 IDTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFF 248 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 249 TTGSVLSFEHIAERWLGYQ 267 >gi|260767618|ref|ZP_05876554.1| glutamate racemase [Vibrio furnissii CIP 102972] gi|260617518|gb|EEX42701.1| glutamate racemase [Vibrio furnissii CIP 102972] gi|315178791|gb|ADT85705.1| glutamate racemase [Vibrio furnissii NCTC 11218] Length = 267 Score = 277 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 15/270 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + +P K L IFDSG+GGL V ++++ +P+ + Y+ D+ +PYG L + Sbjct: 1 MSEHPQYKAL-----IFDSGVGGLSVYREIQTRLPQVSYTYLFDNAAYPYGELAQETLLQ 55 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R+ L ++++ + + VIACNTA T++ LR+ ++ +G VPAIK A+ Sbjct: 56 RVDMLVTNLVAQQGFDIVVIACNTASTIVLPRLRAKL-AIPVVGVVPAIKPASMLAH-KA 113 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++TPAT+ R YT +LI + S ++ L+ S L EE G + +E+ + Sbjct: 114 VGLIATPATITRQYTHDLIRDFSSDKNVELLGSTRLVDMAEEKLRGKAVDLEELASILSP 173 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + DV VL CTH+PLI + + V +D+ ++IARR + LL + T Sbjct: 174 L-----RQHIDVAVLGCTHFPLIKEEIQAVLGKDVMLVDSGEAIARRVQDLL-HLETGSM 227 Query: 243 RVFDDHALFLSGKP--DIAMRRLMQGFGLK 270 + H++F S P + A+ ++ G Sbjct: 228 QDEHPHSIFSSAPPWEEDALNEKLEQLGFS 257 >gi|288926935|ref|ZP_06420833.1| glutamate racemase [Prevotella buccae D17] gi|288336294|gb|EFC74677.1| glutamate racemase [Prevotella buccae D17] Length = 280 Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 100/267 (37%), Gaps = 15/267 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M + I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + Sbjct: 1 MTM----ALPSTPGPIGIFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGTRSFDVV 56 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELR-----STFPSMAFLGAV-PAIKQA 114 + + + L ++ CNTA ++ P LG + P + Sbjct: 57 YQFTRQAVIKLFE-MGCHLVILGCNTASAKALRSIQHRDIPELDPDRRVLGVIRPTAEVI 115 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 T++ + + +T T+R + I + V+ VE + Sbjct: 116 GELTRNNHVGLFATEGTVRSCSYNLEIGKLWPDIKVTGVACPFWVPLVEYNEADSPGADY 175 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +KK ++ + ++ D I+L CTHYPL++ + P V + + +A + Sbjct: 176 FVKKRVDE--LMRKDPEIDTIILGCTHYPLLMPKILKYVPPGVRIIPQGEYVADSLKAYF 233 Query: 235 PRINTHQ--TRVFDDHALFLSGKPDIA 259 R + F + PD Sbjct: 234 ERHPAMERMCTRGGTCEYFTTENPDRF 260 >gi|281425969|ref|ZP_06256882.1| glutamate racemase [Prevotella oris F0302] gi|281399862|gb|EFB30693.1| glutamate racemase [Prevotella oris F0302] Length = 278 Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 101/263 (38%), Gaps = 11/263 (4%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + + Sbjct: 2 PMFPEKPGPIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQ 61 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQS 120 + + L ++ CNTA +L + PS LG + P + T++ Sbjct: 62 AVMKLFE-LGCHLVILGCNTASAKALRSIQRTDLPNLDPSRRVLGVIRPTAEIIGTLTKN 120 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L+T T++ I + + V+ VE + +KK I Sbjct: 121 NHVGLLATEGTVKSHSYDLEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRI 180 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-- 238 + + D I+L CTHYP+++ + V + + +A + L R Sbjct: 181 DELMLH--DPDIDTIILGCTHYPILMPKIVKYVRPGVRIVPQGEYVAGSLQDYLRRHTDM 238 Query: 239 THQTRVFDDHALFLSGKPDIAMR 261 HQ + P+ Sbjct: 239 EHQLTQGGSCRYLTTENPERFKE 261 >gi|198275393|ref|ZP_03207924.1| hypothetical protein BACPLE_01555 [Bacteroides plebeius DSM 17135] gi|198271729|gb|EDY95999.1| hypothetical protein BACPLE_01555 [Bacteroides plebeius DSM 17135] Length = 281 Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 105/262 (40%), Gaps = 11/262 (4%) Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 YP I +FDSG GGL +L K +P+Y ++Y+ D+ PYG + + Sbjct: 2 YPLSAPHTGPIGVFDSGYGGLTILGKFIERLPQYDYLYLGDNARAPYGTRSFEVVYDFTL 61 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQ 119 + + P L ++ACNTA ++ P+ LG + P ++ T+ Sbjct: 62 QAVKKLFELGCP-LVILACNTASAKALRSIQQNDLPHMDPTRRVLGVIRPTVECIGEITR 120 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 +G + +L+T T+R I + ++ + VE + +KK Sbjct: 121 NGHVGLLATAGTVRSESYPLEIKKIFPDIQVTGMACPMWVPLVENKEYDGDGADYFVKKY 180 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 I+ ++ D ++L CTHYPL++ RQ +P + + + ++ + L R Sbjct: 181 IDTIL--QKDPDIDTLILGCTHYPLLLQKIRQYTPSHIRLVTQGEYVSESLKDYLSRHPD 238 Query: 240 HQTRVFDD--HALFLSGKPDIA 259 R + + + Sbjct: 239 MDARCSKNKRREFLTTESVEKF 260 >gi|86130768|ref|ZP_01049367.1| Asp/Glu/hydantoin racemase [Dokdonia donghaensis MED134] gi|85818179|gb|EAQ39339.1| Asp/Glu/hydantoin racemase [Dokdonia donghaensis MED134] Length = 268 Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 6/253 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +N I +FDSGIGG + +++ +P IY+AD PYG + + ++ Sbjct: 4 KNVIGVFDSGIGGTSIWKEIVTRLPGEDTIYIADSKNAPYGAKSKEDIIALSVKNTEKLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + VIACNTA T + LR + + F+G PAIK AA +QS I IL+T TL Sbjct: 64 A-LGAKIIVIACNTATTNAINYLRENYK-IPFIGIEPAIKPAAVQSQSKAIGILATKGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + V L +E+ ++ E+ +E K Sbjct: 122 NSSLFQTTSERWTQGVDVIEVIGEGLVPLIEQG----DLENIELYNLLESYIQPMVEKNI 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL C+HYP ++ + +++ P V +D+ ++AR+ +L +N V +H L+ Sbjct: 178 DYLVLGCSHYPYLIPLLKKMLPPHVAIIDSGLAVARQTEAVLKELNNLSGDVSSEHYLYT 237 Query: 253 SGKPDIAMRRLMQ 265 +G + + L++ Sbjct: 238 NGDVKVLKKVLLR 250 >gi|295105836|emb|CBL03379.1| glutamate racemase [Gordonibacter pamelaeae 7-10-1-b] Length = 313 Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 101/272 (37%), Gaps = 19/272 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG GGL V +++ +P +Y+ D PYG + + + ++ Sbjct: 32 DAPIGVFDSGFGGLTVARELAKALPRESIVYLGDSARCPYGPRTLQEVDGFVQQIGGWLV 91 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D+ + VIACNTA + TFP P + AA T++ + +++T AT+ Sbjct: 92 DRG-VKMVVIACNTATAAGLAHAQRTFPVPVIGVVEPGARAAAHATRNNRVGVVATKATV 150 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------------EDEIKKE 179 + I + + ++ E+ + ++ Sbjct: 151 ESNAYTKAIRHLDAGITVFSTATPRFVEIAEQGIRMAEGPLENYTSLASKVYIRPAFEEI 210 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 D +VL CTH+PL+ + + V + +S AR +L R + Sbjct: 211 AREYLEPLRRAGVDTLVLGCTHFPLLKALIGGVMGREVTLISSSTEAARDVAEILARRSA 270 Query: 240 HQTRVFD-DHALFLSGKPDIAMRRLMQGFGLK 270 + + + F +G R GFG + Sbjct: 271 YARADHEARYEFFTTGDDLEEFR----GFGSR 298 >gi|332974650|gb|EGK11567.1| glutamate racemase [Kingella kingae ATCC 23330] Length = 270 Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 12/268 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++N ++ Q I +FDSG+GGL V++ + +P + +Y D PYG + +++ Sbjct: 1 MNN----QRKQKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTIEE 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSG 121 + +L + + VIACNT + +++ ++ L + A QAA A T++ Sbjct: 57 FTTQIVEFLL-QNEVKALVIACNTIAAVAYKKVQQMAGNIPVLSVIEAGAQAALATTRNN 115 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T T+ + IH+ I ++ +L VEE ++ + I Sbjct: 116 HIGVIATSTTVNSNAYARAIHAQNPDTRILSQATPLLVPLVEEGWLDHEVT----RLTIH 171 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D ++L CTH+PL+ + +P+ ++ +D+S + A L + Sbjct: 172 EYLKPLLADQIDTLILGCTHFPLLKAAIKHEAPY-IELVDSSTTTAEATAQALAATDLLN 230 Query: 242 TRVF-DDHALFLSGKPDIAMRRLMQGFG 268 D+ ++S P + G Sbjct: 231 PSTAIPDYRFYVSDIPLRFQTIGERFLG 258 >gi|54310515|ref|YP_131535.1| glutamate racemase [Photobacterium profundum SS9] gi|46914958|emb|CAG21733.1| putative glutamate racemase [Photobacterium profundum SS9] Length = 262 Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 85/226 (37%), Positives = 130/226 (57%), Gaps = 6/226 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 ++LIFDSG+GGL V Q+++ L+P+ +IY D+ FPYG E+ L +R + + + Sbjct: 2 KTVLIFDSGVGGLSVYQELQALIPQVQYIYAFDNAAFPYGELEEDVLLQRTQHIVCSLAE 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ L VIACNTA T++ LR + S+ +G VPAIK AA +Q+ +I +L+TPAT+ Sbjct: 62 QHNVDLVVIACNTASTIVLPTLRESL-SIPVVGVVPAIKPAATLSQTKVIGLLATPATIH 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R+YT LI S+ S C + ++ S L EE G+ + DEI + I+ K D Sbjct: 121 RSYTHELISSFASDCEVRMIGSTRLVEIAEEKLRGLPVSIDEIAEIIKPW-----QKDVD 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 I+L CTH+PLI RQ + +D+ +IA R + LL + Sbjct: 176 CIILGCTHFPLIKDEIRQALDKAIVIVDSGKAIANRVKDLLGDLPL 221 >gi|319898188|ref|YP_004136385.1| glutamate racemase [Haemophilus influenzae F3031] gi|317433694|emb|CBY82082.1| glutamate racemase [Haemophilus influenzae F3031] Length = 269 Score = 277 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 74/270 (27%), Positives = 133/270 (49%), Gaps = 9/270 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIH 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ Sbjct: 57 RTLSACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T++R Y L+ + C + + + L E+ G + +K E+ Sbjct: 116 IGLLATKGTVKRHYIDELVDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQ 232 Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + P+ + ++ + +G +S Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262 >gi|238923092|ref|YP_002936605.1| glutamate racemase [Eubacterium rectale ATCC 33656] gi|238874764|gb|ACR74471.1| glutamate racemase [Eubacterium rectale ATCC 33656] Length = 258 Score = 277 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 4/231 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++ Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLERVRALTCEHAKELILN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ Y I + L + VE + D++++ +E D Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 +VL CTHYP + + +++ V D + AR + L Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMKRRLAEKGLLTDSTA 228 >gi|158333794|ref|YP_001514966.1| glutamate racemase [Acaryochloris marina MBIC11017] gi|158304035|gb|ABW25652.1| glutamate racemase [Acaryochloris marina MBIC11017] Length = 264 Score = 277 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 9/248 (3%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL VL++++ +P F+Y D PYG + + + + ++++ Sbjct: 1 MGGLTVLKELQQQLPNESFLYFGDTANVPYGTRSQAEILGFVRQILCWM-TSQPIKMAIM 59 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNT+ L DE+R+ F + LG + P + A Q I +++TPAT+ I Sbjct: 60 ACNTSSALALDEVRAEF-DIPILGIILPGARAAVK--QGKRIGVIATPATVASESYPQAI 116 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + + + +E +I+E E + + + D +V CTH Sbjct: 117 QEVNTTAKVFQEACPEFVPLIEHN----RIREPETLQIVHQHLHPLLQQGIDTLVYGCTH 172 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMR 261 YP + V RQ+ P V +D + I A+ L + F+SG P+ Sbjct: 173 YPHLSGVIRQVLPSHVKTVDPAVYITTAAKQELKLLQLQNGHAAQTTRFFVSGCPEQFAE 232 Query: 262 RLMQGFGL 269 Q G Sbjct: 233 LSYQWLGF 240 >gi|291528592|emb|CBK94178.1| glutamate racemase [Eubacterium rectale M104/1] Length = 258 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 4/231 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++ Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLERVRALTCEHAKELILN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ Y I + L + VE + D++++ +E D Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 +VL CTHYP + + +++ V D + AR + L Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMKRRLAEKGLLTDSTA 228 >gi|222035687|emb|CAP78432.1| glutamate racemase [Escherichia coli LF82] Length = 260 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 81/255 (31%), Positives = 138/255 (54%), Gaps = 4/255 (1%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 1 MFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYPL 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+YT Sbjct: 61 ALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYT 119 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 LI + ++C I ++ S + E G + D +K+ + KE D +VL Sbjct: 120 HELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVVL 177 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTH+PL+ Q+ P +D+ +IARR LL + A ++ P+ Sbjct: 178 GCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPE 237 Query: 258 -IAMRRLMQGFGLKS 271 + ++Q +G ++ Sbjct: 238 AEQLLPVLQRYGFET 252 >gi|229108454|ref|ZP_04238071.1| Glutamate racemase [Bacillus cereus Rock1-15] gi|228675081|gb|EEL30308.1| Glutamate racemase [Bacillus cereus Rock1-15] Length = 265 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 104/254 (40%), Gaps = 7/254 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA EL+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 60 KTLVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 +H + +H + LA+ VE + ++++ + + D ++ Sbjct: 119 YEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTLI 174 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHYPL+ ++ + + +++ A +L + H F +G Sbjct: 175 LGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSV 234 Query: 257 DIAMRRLMQGFGLK 270 + G + Sbjct: 235 LSFEHIAERWLGYQ 248 >gi|225849254|ref|YP_002729418.1| glutamate racemase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644018|gb|ACN99068.1| glutamate racemase [Sulfurihydrogenibium azorense Az-Fu1] Length = 260 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 11/241 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI IFDSGIGGL V +++ P+ Y+ D PYGN + + + + + Sbjct: 2 SIGIFDSGIGGLTVFKEVAENFPKADIYYLGDTARVPYGNKSKETIIRYSIECATYLYHN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + L +IACNTA + + L+ P + +G V P + A YT++ + ++ T AT++ Sbjct: 62 FNVDLLIIACNTASSYAIETLKKILP-IPIIGVVKPGAEAAIRYTKNKKVGVIGTVATVK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 N + + + I+ + VEE ++ +K+ ++ E K D Sbjct: 121 SQSYVNELKNLDNSLEIYQKPCPLFVPLVEEGWIDNEVARLTVKEYLQ----ELIEKGID 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----VFDDHA 249 ++L CTHYPL+ + + L P ++ +D+S +I + L N + R + HA Sbjct: 177 TLILGCTHYPLLKNTIKSLYP-HLNIVDSSIAIVDHIKNLNLTFNGNGVRKVFITDESHA 235 Query: 250 L 250 Sbjct: 236 F 236 >gi|317487823|ref|ZP_07946416.1| Asp/Glu/Hydantoin racemase [Eggerthella sp. 1_3_56FAA] gi|325830581|ref|ZP_08164002.1| glutamate racemase [Eggerthella sp. HGA1] gi|316913098|gb|EFV34614.1| Asp/Glu/Hydantoin racemase [Eggerthella sp. 1_3_56FAA] gi|325487327|gb|EGC89769.1| glutamate racemase [Eggerthella sp. HGA1] Length = 303 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 96/263 (36%), Gaps = 15/263 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG GGL V +++ +P +Y+ D PYG + + + + ++ Sbjct: 21 NAPIGVFDSGFGGLTVAREIAKELPRESIVYLGDSARCPYGPRSLDEVDGFVQQIGAWLV 80 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L VIACNTA + TFP P + AA T++ + +++T AT+ Sbjct: 81 ERG-VKLVVIACNTATAAGLAHAQRTFPVPVIGVVEPGARAAAHATKNRRVGVIATKATV 139 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------------EDEIKKE 179 + I + + ++ E+ + ++ Sbjct: 140 ESDAYTKAIRHLDAGITVFSTATPRFVEIAEQGLRMAEGPIEDFTSLVSTVYIRPAFQEI 199 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 D +VL CTH+PL+ + + V + ++ A +L R Sbjct: 200 AREYLEPLRRCDIDTLVLGCTHFPLLKALIGGVVGREVTLISSAQEAAHDVAHILSRRGA 259 Query: 240 HQTRVF-DDHALFLSGKPDIAMR 261 + + + +G+ R Sbjct: 260 LASEDHEPSYDFYTTGEDVEEFR 282 >gi|229042717|ref|ZP_04190457.1| Glutamate racemase [Bacillus cereus AH676] gi|228726657|gb|EEL77874.1| Glutamate racemase [Bacillus cereus AH676] Length = 265 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 104/254 (40%), Gaps = 7/254 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA EL+ S+ +G + P + A T+ I ++ T T++ Sbjct: 60 KALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 +H + +H + LA+ VE I + ++++ + + D ++ Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENRLEDI----AYVTQQVKQALLPLTKEDIDTLI 174 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSV 234 Query: 257 DIAMRRLMQGFGLK 270 + G + Sbjct: 235 LSFEHIAERWLGYQ 248 >gi|227488222|ref|ZP_03918538.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51867] gi|227542820|ref|ZP_03972869.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091792|gb|EEI27104.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181446|gb|EEI62418.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51866] Length = 261 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 9/254 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V + + +P Y+ D PYG ++ + ++ Sbjct: 4 RPIGIFDSGVGGLTVARAIADQLPHESIHYLGDTAHAPYGPRTADEVRALSTSVADQLVA 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA ++ DE R+ + + LG + PA+++A T++G +++L T T+ Sbjct: 64 R-DIKLLVIACNTATSVFLDEARALY-DVPVLGVIEPAVRRAVQVTKNGKVAVLGTVGTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + SY + + VE +I + + Sbjct: 122 RSGEYQRQMESY-EGVTCYAAPAPRFVDFVERGIT----TGRQILGVAQAYVSPLQEAGV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251 D VL CTHYPL+ V + V + +S+ A+ LL + + + Sbjct: 177 DTCVLGCTHYPLLSGVIQLAIGDHVTLVSSSEETAKAVVRLLMEEDLLAPEDAEPERRYE 236 Query: 252 LSGKPDIAMRRLMQ 265 +G P + + + Sbjct: 237 TTGDPRLFAQLASR 250 >gi|120600465|ref|YP_965039.1| glutamate racemase [Shewanella sp. W3-18-1] gi|146294593|ref|YP_001185017.1| glutamate racemase [Shewanella putrefaciens CN-32] gi|120560558|gb|ABM26485.1| glutamate racemase [Shewanella sp. W3-18-1] gi|145566283|gb|ABP77218.1| glutamate racemase [Shewanella putrefaciens CN-32] Length = 268 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 10/265 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R L+P+ + Y+ D+ PYG E+ L + L ++ Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKLLPQKEYCYLFDNARLPYGELEEQVLISGCVTLIEEL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + V+ACNTA TL+ LR S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 AIRIDAAIVVVACNTASTLVLPALREKL-SIPIVGVVPAIKPAALMSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +RR YT LI + CH+ L L E+ + + + Sbjct: 120 VRRHYTHKLISQFADGCHVELFGCSELVMMAEQKVATGILN----IERLARILAPVVAAD 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDH-- 248 DV+VL CTH+P+I + + + V LD+ ++IA+R LL + Sbjct: 176 LDVLVLGCTHFPMIRNELQLVLGAGVTLLDSGEAIAKRVVALLAQESGVLDNKTMGSKAS 235 Query: 249 --ALFLSGKPDIAMRRLMQGFGLKS 271 A + + + + G + Sbjct: 236 MSAYYTKAEISEGLSSTLADCGFSA 260 >gi|256824843|ref|YP_003148803.1| glutamate racemase [Kytococcus sedentarius DSM 20547] gi|256688236|gb|ACV06038.1| glutamate racemase [Kytococcus sedentarius DSM 20547] Length = 285 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 96/256 (37%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL V + + +P +Y+ D PYG +++ + ++D Sbjct: 4 APIGIFDSGLGGLTVARAVIDHLPHESTVYLGDTHHAPYGPRPIAEVRRLALDSLDALMD 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACN+A + + R + PA ++AA T++G + ++ST AT Sbjct: 64 RGVKAL-VIACNSASAAVLHDARERYSVPVIEVIRPAARRAAGITRTGAVGVISTQATHT 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + V + VE I E+ + D Sbjct: 123 SGAYRDAFAA-VPSVQLRSQPCPRFVHFVESG----TISGPEVFAAATEYLQPLKEAGVD 177 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPRINTHQTRVFDDHALFL 252 ++L CTHYPL+ V V + +++ A R L R H Sbjct: 178 TLILGCTHYPLLRGVIAYEMGPEVSLVSSAEETAAELLRTLADRGELAPDATVPTHEFLT 237 Query: 253 SGKPDIAMRRLMQGFG 268 +G P + G Sbjct: 238 TGDPSQFSELARRFLG 253 >gi|189500924|ref|YP_001960394.1| glutamate racemase [Chlorobium phaeobacteroides BS1] gi|189496365|gb|ACE04913.1| glutamate racemase [Chlorobium phaeobacteroides BS1] Length = 269 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 11/252 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + IFDSGIGGL V++ ++ L+P IY D PYG+ ++K I Sbjct: 5 ASSPVGIFDSGIGGLTVVKAIQALLPSERIIYFGDTARVPYGSKSQVTIRKYAQDDTG-I 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130 L KYQP L ++ACNT L D ++ + LG + A + A +++ + ++ T A Sbjct: 64 LMKYQPKLIIVACNTVSALALDVVKRAGHGIPVLGVLEAGAELAVENSRNNQVGVIGTRA 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ +++ + + + + EE E ++ + Sbjct: 124 TVLSNAYPLAMNALNPEVEVFSAACPLFVPLAEEGFIDHPAAEMIARE----YLLPLLDH 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDD 247 D +VL CTHYP++ + +++ V +D+++++A +++ +L +N Q VF Sbjct: 180 GIDTLVLGCTHYPILRKMIAEIAGQEVRIIDSAEAVALKSKEMLAGNGMLNGSQCHVFP- 238 Query: 248 HALFLSGKPDIA 259 L +S P Sbjct: 239 -HLLVSDLPQKF 249 >gi|218710895|ref|YP_002418516.1| glutamate racemase [Vibrio splendidus LGP32] gi|218323914|emb|CAV20275.1| glutamate racemase [Vibrio splendidus LGP32] Length = 276 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 138/266 (51%), Gaps = 11/266 (4%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + +Q +ILIFDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ + Sbjct: 11 VSESIQKNILIFDSGVGGLSVYKEISQLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSI 70 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + + + VIACNTA T++ LR+ P + +G VPAIK A+ + + +++ Sbjct: 71 VASFVASHAIDIVVIACNTASTIVLPTLRANNP-IPIVGVVPAIKPASLL-ANKAVGLIA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TPAT+ R YT LI ++ S + L+ S L E+ G I +E+++ ++ Sbjct: 129 TPATITREYTHELIKNFSSNKRVELLGSTQLVDMAEDKLRGEAINLEELRQILQPMI--- 185 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 DV VL CTH+PLI +Q+ V +D+ +IA+R + LL T Sbjct: 186 --NTIDVAVLGCTHFPLIKSEIQQVLGKNVMLIDSGKAIAKRVQDLLDL--ESSTEEGGV 241 Query: 248 HALFLSGKP--DIAMRRLMQGFGLKS 271 F S P + A+ +++ G S Sbjct: 242 REAFCSALPKKESALNSMLKQLGFSS 267 >gi|324324893|gb|ADY20153.1| glutamate racemase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 276 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 7/258 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLMKEN 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + +H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGL 269 +G + G Sbjct: 241 TTGSALSFEHIAERWLGY 258 >gi|169634818|ref|YP_001708554.1| putative glutamate racemase [Acinetobacter baumannii SDF] gi|169153610|emb|CAP02797.1| putative glutamate racemase [Acinetobacter baumannii] Length = 266 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 10/268 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I + DSG+GGL + + +R +P IY AD PYGN E + R L Sbjct: 1 MNNNNSPIGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGNRESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + VIACNT + + +R+ ++ + PA+K A A T S I++L+T Sbjct: 61 SNLVAHGKCKAIVIACNTMTAVAVETIRAQI-NVPLISIEPAVKPAVAMTVSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E E+K ++ Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235 Query: 248 HALFLSGKP----DIAMRRLMQGFGLKS 271 H ++ S P D+ L + +K+ Sbjct: 236 HIIWTSSDPLEVADVTFSLLSEKLSVKA 263 >gi|206975573|ref|ZP_03236485.1| glutamate racemase [Bacillus cereus H3081.97] gi|222094594|ref|YP_002528654.1| glutamate racemase [Bacillus cereus Q1] gi|206746035|gb|EDZ57430.1| glutamate racemase [Bacillus cereus H3081.97] gi|221238652|gb|ACM11362.1| glutamate racemase [Bacillus cereus Q1] Length = 276 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 7/258 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE +++K+ + + Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + +H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGL 269 +G + G Sbjct: 241 TTGSALSFEHIAERWLGY 258 >gi|196037606|ref|ZP_03104917.1| glutamate racemase [Bacillus cereus NVH0597-99] gi|218902060|ref|YP_002449894.1| glutamate racemase [Bacillus cereus AH820] gi|196031848|gb|EDX70444.1| glutamate racemase [Bacillus cereus NVH0597-99] gi|218535080|gb|ACK87478.1| glutamate racemase [Bacillus cereus AH820] Length = 276 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IQSNMYEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259 >gi|50955005|ref|YP_062293.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07] gi|71648716|sp|Q6AEK8|MURI_LEIXX RecName: Full=Glutamate racemase gi|50951487|gb|AAT89188.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 272 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 97/256 (37%), Gaps = 7/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + +R +P +YV D PYG +++ + + D+L Sbjct: 3 DAPIGIFDSGVGGLTVARAIRDQLPNESILYVGDTTHSPYGPKPIADVRRYSLEVL-DLL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA + + + R + PA+++A A T++G + ++ T T+ Sbjct: 62 VEQGVKLLVIACNTASSAVLRDARERYAVPVVEVIQPAVRRAVAATRTGRVGVIGTVGTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + VE DE+ + Sbjct: 122 ASRAYEDAFAA-APDLRLFPRACPRFVEFVETGVTSG----DEVLRVAAEYLQPLRDADV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251 D +VL CTHYP + + V + + A+ +L + + Sbjct: 177 DTLVLGCTHYPFLEGAISYVMGEGVSLVSSDIETAKDVYRILVSGGFERHDSAPPTVRYE 236 Query: 252 LSGKPDIAMRRLMQGF 267 +G RL F Sbjct: 237 ATGLDAEHFLRLAHRF 252 >gi|319424831|gb|ADV52905.1| glutamate racemase [Shewanella putrefaciens 200] Length = 268 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 10/265 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSGIGGL VL ++R L+P+ + Y+ D+ PYG E+ L + L ++ Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKLLPQKEYCYLFDNARLPYGELEEQVLISGCVTLIEEL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + V+ACNTA TL+ LR S+ +G VPAIK AA ++S I +L+TP T Sbjct: 61 AIRIDAAIVVVACNTASTLVLPALREKL-SIPIVGVVPAIKPAALMSKSKRIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +RR YT LI + CH+ L L E+ + + + Sbjct: 120 VRRHYTHKLISQFADGCHVELFGCSELVMMAEQKVATGILN----IERLARILAPVVAAD 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-----NTHQTRVFD 246 DV+VL CTH+P+I + + + V LD+ ++IA+R LL + N Sbjct: 176 LDVLVLGCTHFPMIRNELQLVLGAGVTLLDSGEAIAKRVVALLAQESEVLDNKTMGSKAS 235 Query: 247 DHALFLSGKPDIAMRRLMQGFGLKS 271 A + + + + G + Sbjct: 236 MSAYYTKAEISEGLSSTLADCGFSA 260 >gi|227548659|ref|ZP_03978708.1| glutamate racemase [Corynebacterium lipophiloflavum DSM 44291] gi|227079273|gb|EEI17236.1| glutamate racemase [Corynebacterium lipophiloflavum DSM 44291] Length = 258 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 99/255 (38%), Gaps = 10/255 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + M + IY+ D PYG ++ R + +++++ Sbjct: 1 MFDSGLGGLTVARAMMDQLHNESLIYIGDSANGPYGPQPIADVRIRAQNIADELVERG-V 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNTA + R + PA+++A A T++ + ++ T T+ Sbjct: 60 KMLVIACNTASAAFLHDARERYDVPVIEVIRPAVRRAIATTRNNRVGVIGTIGTINSGAY 119 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +L S + + VE + +I +G + D +VL Sbjct: 120 QDLF-SLQPGIEVTAAACPAFVEFVERGVTSGR----QILGVAQGYLEPLQAAGVDTLVL 174 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----VFDDHALFLS 253 CTHYPL+ V + V + +++ A+ +L + + Sbjct: 175 GCTHYPLLSGVIQLAMGDNVTLVSSAEETAKDVLRVLTERDLLAPEGLDAPAPTRVFEST 234 Query: 254 GKPDIAMRRLMQGFG 268 G P+ R + G Sbjct: 235 GDPETFNRLAARFLG 249 >gi|237809706|ref|YP_002894146.1| glutamate racemase [Tolumonas auensis DSM 9187] gi|237501967|gb|ACQ94560.1| glutamate racemase [Tolumonas auensis DSM 9187] Length = 274 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 5/262 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 ++ +IL+FDSG+GGL + Q++R +P + + YV D+ FPYG +H + R L Sbjct: 10 RINVNILLFDSGMGGLSIYQEVRRRLPGHRYDYVFDNAFFPYGEQPEHIITARCCLLIEH 69 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + Q L VIACNTA T++ LR ++ +G VPAIK AAA T++G I +L+TPA Sbjct: 70 LVSERQIDLVVIACNTASTIVLPALRERL-AIPVVGVVPAIKPAAALTRNGSIGLLATPA 128 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++R YTS LI + + C + + L + E G + E I ++ Sbjct: 129 TVQRPYTSQLIAQFATHCQVLKLGVTELVVQAERKMAGYDVDEQAIHLALQPLLTHAMP- 187 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTH+PL+ ++ P + +D+ +IA+R LL A Sbjct: 188 -PDTLVLGCTHFPLLKEEICRIMP-GIQLVDSGAAIAKRVAALLQGKIASDVTDTAGQAF 245 Query: 251 FLSGKPDIAMR-RLMQGFGLKS 271 PD + R++ +G S Sbjct: 246 CTLLDPDAHKKSRILVEYGFHS 267 >gi|114566002|ref|YP_753156.1| glutamate racemase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336937|gb|ABI67785.1| glutamate racemase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 267 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 10/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V++ + MP+ FIY D PYGN + L + S ++ Sbjct: 4 NEPIGIFDSGVGGLTVVKSLMEKMPDESFIYFGDTAHVPYGNKSEQQLFNYAHKIISFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 K Q ++AC T ++ + + S+ LG V A + AA +++G I + +T AT Sbjct: 64 SK-QVKAIIVACGTHSSVTLPSVLQEY-SLPMLGVVKAGARSAARLSRNGKIGVAATQAT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + I ++ + VE K+ E ++ + + Sbjct: 122 VNKKAYTREIQELEPDFQVYETACPRFVPLVEAG----KLNNSESREAVAEYLGPLLAQG 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250 D +VL CTHYP + + + ++ +D S + + + + + H Sbjct: 178 IDTLVLGCTHYPFLATAISEFAGEKLELVDTSCETIDELQEIFGAQDLFNNSGKKPRHEF 237 Query: 251 FLSGKPDIAMR--RLMQG 266 ++SG D RL+ G Sbjct: 238 YVSGHDDSFFNVGRLLMG 255 >gi|229149186|ref|ZP_04277427.1| Glutamate racemase [Bacillus cereus m1550] gi|228634385|gb|EEK90973.1| Glutamate racemase [Bacillus cereus m1550] Length = 276 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 102/259 (39%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNT S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNT-AAAAALNALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IKSNMYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ + + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVLSFEHIAERWLGYQ 259 >gi|254520425|ref|ZP_05132481.1| glutamate racemase [Clostridium sp. 7_2_43FAA] gi|226914174|gb|EEH99375.1| glutamate racemase [Clostridium sp. 7_2_43FAA] Length = 257 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 12/254 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN I FDSG+GGL V+++ +MP ++IY D PYG ++ Sbjct: 1 MDNK------NRPIGFFDSGVGGLSVMKEAIQVMPNENYIYFGDSKNAPYGVKSVEEVRD 54 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+K ++ IACNTA + +LR +P + +G PA+K A + G Sbjct: 55 LTFKAVEFLLNKGVKGIA-IACNTATSAAVADLRKIYPDLPLVGIEPALKPAVELNKDGN 113 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I I++T TL+ + L++ Y + I V L +E K+ E+++ + Sbjct: 114 ILIMATSMTLKEEKFNRLMNRYKDRASIIPVPCPGLVEFIEAG----KLDGKEVEEYLFE 169 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-Q 241 G + IVL CTHYP I ++ + +D A+ R L N + Sbjct: 170 KVNTYNGGKIASIVLGCTHYPFIKDTLVKIIGKDITIIDGGLGTAKELRRRLSEKNLLTE 229 Query: 242 TRVFDDHALFLSGK 255 +R + S Sbjct: 230 SRENGTIEIINSSN 243 >gi|146339801|ref|YP_001204849.1| glutamate racemase [Bradyrhizobium sp. ORS278] gi|146192607|emb|CAL76612.1| glutamate racemase [Bradyrhizobium sp. ORS278] Length = 265 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 105/259 (40%), Positives = 151/259 (58%), Gaps = 5/259 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ + AL R++ L +++ Sbjct: 4 RPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSEPALVARVVPLMGELI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++P L VIACNTA LR+ + + F+G VPAIK A A +++ +S+L T AT+ Sbjct: 64 SAHRPDLIVIACNTASVQTLAPLRAAYAT-PFVGTVPAIKPACAQSRTKRVSVLGTKATV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG--- 189 +R YT LI + C + LV S LAS E G + +D I EI CF G Sbjct: 123 QREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTGVSDDAIAMEIAPCFTGDAGDPT 182 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 RTD +VLACTHYPL++ ++L+PWPV W+D + +IARR LL + + Sbjct: 183 ARTDAVVLACTHYPLLLDRLQRLAPWPVAWIDPAPAIARRVVDLLG-PQSGRVDHGGATM 241 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +F S KP R L FG Sbjct: 242 IFTSNKPHQLSRVLTPYFG 260 >gi|293610501|ref|ZP_06692801.1| predicted protein [Acinetobacter sp. SH024] gi|292826845|gb|EFF85210.1| predicted protein [Acinetobacter sp. SH024] Length = 266 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 6/249 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S++++ V+ACNT + + +R+ ++ + PA+K A A TQS I++L+T Sbjct: 61 SNLINDGNCKAIVVACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E E+K ++ Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235 Query: 248 HALFLSGKP 256 H ++ S P Sbjct: 236 HIIWTSSDP 244 >gi|291612568|ref|YP_003522725.1| glutamate racemase [Sideroxydans lithotrophicus ES-1] gi|291582680|gb|ADE10338.1| glutamate racemase [Sideroxydans lithotrophicus ES-1] Length = 268 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 6/258 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + +I +FDSG+GGL VLQ +R +P IYVAD PYG+ ++ R + + Sbjct: 2 QPAGAIGVFDSGVGGLSVLQHIRHTLPHERLIYVADSGHVPYGDKSPAFIEARALAITRF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + VIACNTA LR F M L PA+K A A TQS ++ +L+T Sbjct: 62 LISQGA-EAIVIACNTATAAAAHTLRVKFNKMPILAMEPAVKPAIAVTQSRVVGVLATVG 120 Query: 131 TLRRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TL + L+ Y + I L +VE ++ ++ +E Sbjct: 121 TLESARFAALLEKYGGWKVKIETQGCPGLVEQVERG----ELHSARTRELVERYTAPLLR 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 K D ++L CTHYP + + R++ + +D ++AR + + + Sbjct: 177 KGADTLILGCTHYPFLAPLIREIVGDNITLIDTGAAVARHLQHRVKAELPPRIVGEASER 236 Query: 250 LFLSGKPDIAMRRLMQGF 267 F SG P+ A R + + Sbjct: 237 FFTSGDPEQASRIMSMLW 254 >gi|156972605|ref|YP_001443512.1| glutamate racemase [Vibrio harveyi ATCC BAA-1116] gi|166231065|sp|A7MXD3|MURI_VIBHB RecName: Full=Glutamate racemase gi|156524199|gb|ABU69285.1| hypothetical protein VIBHAR_00256 [Vibrio harveyi ATCC BAA-1116] Length = 268 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P ++Y+ D+ +PYG + L R+ L + ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPHMDYLYLFDNEAYPYGELDQDVLITRVNKLVAALV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA T++ LR+ S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 EEHQADIVVIACNTASTIVLPSLRANL-SIPVVGVVPAIKPASLLASQG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + L+ S L EE G I E++ + + Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESISLSELESILLPL-----RNKV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV VL CTH+PLI Q V +D+ ++IARR + LL ++R ++ Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGGEVTLVDSGEAIARRVKALLLNAMKQESREEGSKKIYA 238 Query: 253 SGKP--DIAMRRLMQGFGLK 270 S P + A+ + G Sbjct: 239 SAPPWQEDALNTCLANLGFN 258 >gi|169794284|ref|YP_001712077.1| putative glutamate racemase [Acinetobacter baumannii AYE] gi|215481842|ref|YP_002324024.1| glutamate racemase [Acinetobacter baumannii AB307-0294] gi|301347985|ref|ZP_07228726.1| glutamate racemase [Acinetobacter baumannii AB056] gi|301512532|ref|ZP_07237769.1| glutamate racemase [Acinetobacter baumannii AB058] gi|332850363|ref|ZP_08432697.1| glutamate racemase [Acinetobacter baumannii 6013150] gi|332871530|ref|ZP_08440024.1| glutamate racemase [Acinetobacter baumannii 6013113] gi|169147211|emb|CAM85070.1| putative glutamate racemase [Acinetobacter baumannii AYE] gi|213986873|gb|ACJ57172.1| glutamate racemase [Acinetobacter baumannii AB307-0294] gi|332730821|gb|EGJ62131.1| glutamate racemase [Acinetobacter baumannii 6013150] gi|332731384|gb|EGJ62676.1| glutamate racemase [Acinetobacter baumannii 6013113] Length = 266 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 6/249 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T Sbjct: 61 SNLVTQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E E+K +E Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----YTAEVKDYLENILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + +++ + ++ S+++ A+ R L ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLNSESPNEGN 235 Query: 248 HALFLSGKP 256 H ++ S P Sbjct: 236 HIIWTSSDP 244 >gi|206968268|ref|ZP_03229224.1| glutamate racemase [Bacillus cereus AH1134] gi|206737188|gb|EDZ54335.1| glutamate racemase [Bacillus cereus AH1134] Length = 276 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 102/259 (39%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNT S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNT-AAAAALNALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IKSNMYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ + + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVLSFEHIAERWLGYQ 259 >gi|30260986|ref|NP_843363.1| glutamate racemase [Bacillus anthracis str. Ames] gi|47526136|ref|YP_017485.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor'] gi|49183830|ref|YP_027082.1| glutamate racemase [Bacillus anthracis str. Sterne] gi|65318262|ref|ZP_00391221.1| COG0796: Glutamate racemase [Bacillus anthracis str. A2012] gi|165871919|ref|ZP_02216561.1| glutamate racemase [Bacillus anthracis str. A0488] gi|167635884|ref|ZP_02394192.1| glutamate racemase [Bacillus anthracis str. A0442] gi|167638901|ref|ZP_02397175.1| glutamate racemase [Bacillus anthracis str. A0193] gi|170687688|ref|ZP_02878904.1| glutamate racemase [Bacillus anthracis str. A0465] gi|170708261|ref|ZP_02898706.1| glutamate racemase [Bacillus anthracis str. A0389] gi|177653883|ref|ZP_02935955.1| glutamate racemase [Bacillus anthracis str. A0174] gi|190566741|ref|ZP_03019658.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I] gi|227816283|ref|YP_002816292.1| glutamate racemase [Bacillus anthracis str. CDC 684] gi|229604796|ref|YP_002865427.1| glutamate racemase [Bacillus anthracis str. A0248] gi|254682956|ref|ZP_05146817.1| glutamate racemase [Bacillus anthracis str. CNEVA-9066] gi|254734368|ref|ZP_05192081.1| glutamate racemase [Bacillus anthracis str. Western North America USA6153] gi|254739982|ref|ZP_05197674.1| glutamate racemase [Bacillus anthracis str. Kruger B] gi|254753322|ref|ZP_05205358.1| glutamate racemase [Bacillus anthracis str. Vollum] gi|150261200|pdb|2DWU|A Chain A, Crystal Structure Of Glutamate Racemase Isoform Race1 From Bacillus Anthracis gi|150261201|pdb|2DWU|B Chain B, Crystal Structure Of Glutamate Racemase Isoform Race1 From Bacillus Anthracis gi|150261202|pdb|2DWU|C Chain C, Crystal Structure Of Glutamate Racemase Isoform Race1 From Bacillus Anthracis gi|30254435|gb|AAP24849.1| glutamate racemase [Bacillus anthracis str. Ames] gi|47501284|gb|AAT29960.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor'] gi|49177757|gb|AAT53133.1| glutamate racemase [Bacillus anthracis str. Sterne] gi|164712350|gb|EDR17885.1| glutamate racemase [Bacillus anthracis str. A0488] gi|167513031|gb|EDR88403.1| glutamate racemase [Bacillus anthracis str. A0193] gi|167528701|gb|EDR91460.1| glutamate racemase [Bacillus anthracis str. A0442] gi|170126782|gb|EDS95664.1| glutamate racemase [Bacillus anthracis str. A0389] gi|170668501|gb|EDT19248.1| glutamate racemase [Bacillus anthracis str. A0465] gi|172081111|gb|EDT66188.1| glutamate racemase [Bacillus anthracis str. A0174] gi|190562293|gb|EDV16261.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I] gi|227007254|gb|ACP16997.1| glutamate racemase [Bacillus anthracis str. CDC 684] gi|229269204|gb|ACQ50841.1| glutamate racemase [Bacillus anthracis str. A0248] Length = 276 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IQSNMYEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259 >gi|225027973|ref|ZP_03717165.1| hypothetical protein EUBHAL_02233 [Eubacterium hallii DSM 3353] gi|224954687|gb|EEG35896.1| hypothetical protein EUBHAL_02233 [Eubacterium hallii DSM 3353] Length = 274 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 5/253 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +L + I +FDSG+GG+ VL++M LMP FIY D PYG ++ + Sbjct: 16 MNQLSDPIAVFDSGMGGISVLREMTKLMPNEDFIYYGDSKHAPYGTKTLEEVRTLTIEHI 75 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + ++ + +ACNTA + LR +P + +G PAIK A T + +++T Sbjct: 76 TYLIKEKHAKAVAVACNTATSAAVRILRDMYPDLPLVGVEPAIKPAVLATGHAKVVVMAT 135 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 P TLR L Y Q I+ + L VE+ + ++++ + + Sbjct: 136 PMTLREEKFHKLESLYDEQADIYPLPCPGLMEFVEQGI----LSGEKLETFLHNLLDPYK 191 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDD 247 K IVL CTHYP + ++++ V D A+ L + Q Sbjct: 192 DKDITGIVLGCTHYPFLKETIQKIAGPSVTIFDGGYGTAKELLRRLRVADLAQVDNTRKG 251 Query: 248 HALFLSGKPDIAM 260 FL+ D A+ Sbjct: 252 SVTFLNSSDDPAL 264 >gi|160915680|ref|ZP_02077888.1| hypothetical protein EUBDOL_01688 [Eubacterium dolichum DSM 3991] gi|158432156|gb|EDP10445.1| hypothetical protein EUBDOL_01688 [Eubacterium dolichum DSM 3991] Length = 258 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 5/258 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + + I IFDSG+GG+ VL+++ LMP+ + +Y D PYG + +R + Sbjct: 2 NVNSPIGIFDSGMGGISVLKQIHALMPQENLLYFGDSAYAPYGEKSRAEITERCYSICEF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + K VIACNTA + +ELR + ++ +G PA+K AA Q I +L+T Sbjct: 62 FMRKK-VKAIVIACNTATSACVNELRKRYLNIPIIGMEPALKVAADNEQQQHILVLATYF 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL+ ++L+ + I+ L VEE+ E+ +K+ + + Sbjct: 121 TLKEKKFADLMARCEKEHIIYKQPCPALVHIVEEHKLQ---DEELVKQTLRNYLAPYNLE 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249 + IVL CTH+ +L P + +D + A++ + LL + QT+ Sbjct: 178 EINSIVLGCTHFVFYRKYLTELLPKHIAIIDGNTGTAKQVKHLLEERDLLKQTKDIGAIE 237 Query: 250 LFLSGKPDIAMRRLMQGF 267 ++ S + D ++ L Q Sbjct: 238 IYNSLEDDKDIQDLAQEL 255 >gi|254479197|ref|ZP_05092544.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653] gi|214034860|gb|EEB75587.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653] Length = 264 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D+ P I +FDSG+GGL VL+++ ++PE +IY D PYG+ ++ Sbjct: 1 MDSRP--------IGVFDSGVGGLTVLKRLIQVLPEEDYIYFGDTKRVPYGDRSKEEIEL 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + + +K VIACNT I + + F + T++ Sbjct: 53 FAGQIINFMKEK-NVKAVVIACNTTCATID---KGKYDIELFDVLKAGAESGVYCTKNKK 108 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++T T+ I S Q ++ + +E+ + E Sbjct: 109 VGVIATKRTVESRSYEINIKSINPQIEVYQKACPEFVPLIEKGLYNSPLA----YSVAEK 164 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 C + + K D ++L CTHYPL+ + +++ V+ +D + +A + L + N + Sbjct: 165 CLKDLKAKEIDTLILGCTHYPLMEGIIKEIMGDGVEVVDPAIRLAFEVKKYLEKNNILNS 224 Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFG 268 F+SG + + G Sbjct: 225 GPKGKIEFFVSGDAENFKKTAEMVLG 250 >gi|42523267|ref|NP_968647.1| hypothetical protein Bd1778 [Bdellovibrio bacteriovorus HD100] gi|39575472|emb|CAE79640.1| murI [Bdellovibrio bacteriovorus HD100] Length = 268 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 109/258 (42%), Gaps = 13/258 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL VL+++ P F+YV D PYG+ ++K + L Sbjct: 6 SRPIGVFDSGIGGLTVLKELALQFPHESFLYVGDTARLPYGSKSPQTIRKYSEQII-QFL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K VIACNTA + + + P + P ++A + I +L+T AT+ Sbjct: 65 EKQNVKAIVIACNTASSQVPEREIDGLPIYNVI--EPGSQRALELSSGKRIGVLATRATV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ IH+ Q + + + EE + + + + Sbjct: 123 NSQAYTHKIHALDPQAQVFDQACPLFVPLAEEGWDADPVTNLIVFRYLSPLLQ----NHI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHAL 250 D ++L CTHYP++ + +++ ++ +D+ ++IA+ R+ +++ + Sbjct: 179 DTLILGCTHYPILKNSIARVTGSSIELVDSGEAIAQWLSRDFKSGRLGPNKSGEPRRIDI 238 Query: 251 FLSGK----PDIAMRRLM 264 + ++A R L Sbjct: 239 MTTDSSAHFTEMAQRILK 256 >gi|325123931|gb|ADY83454.1| putative glutamate racemase [Acinetobacter calcoaceticus PHEA-2] Length = 266 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 121/249 (48%), Gaps = 6/249 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + + VIACNT + + +R+ ++ + PA+K A A TQ+ I++L+T Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQTKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E E+K +E Sbjct: 120 ATTVKGKNLKSLIETYAQHIKVSLVPCIGLAEKIETGKA----HTVEVKDYLENILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + + +++ + ++ S+++ A+ R L + ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDMIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235 Query: 248 HALFLSGKP 256 H ++ S P Sbjct: 236 HIIWTSSDP 244 >gi|257063632|ref|YP_003143304.1| glutamate racemase [Slackia heliotrinireducens DSM 20476] gi|256791285|gb|ACV21955.1| glutamate racemase [Slackia heliotrinireducens DSM 20476] Length = 307 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 103/274 (37%), Gaps = 23/274 (8%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG GGL +++ LMP +Y D PYG + + + + + ++ Sbjct: 22 NAPIGVFDSGYGGLTCAREIAELMPNESIVYFGDTARCPYGPRDQAEVDLFVQQIGAWLM 81 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPAT 131 DK + VIACNTA + + TF S+ LG P + AA T++ + ++ T T Sbjct: 82 DKG-VKMLVIACNTATAAGLEHAQQTF-SVPILGAVEPGARAAARTTKNRKVGVIGTKGT 139 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------------EDEIKK 178 + I + + + ++ VE K E + Sbjct: 140 IESGCYPRAIRNIDAGITVFSTATPRFVEIVENGIRLAKGPFEDLTSSVSKVYIRPEFRT 199 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 D +VLACTHYP++ + + V + +++ +A+ +L Sbjct: 200 IAIEYLEPLRRCEIDTLVLACTHYPMLKALIGGVIGTNVRLVSSAEELAKDVHDVLSMRG 259 Query: 239 THQTRVF-DDHALFLSG-KPDIAMRRLMQGFGLK 270 +H F + D Q FG + Sbjct: 260 QLADPNHVGEHRFFTTSTDVDEF-----QAFGSR 288 >gi|254758420|ref|ZP_05210447.1| glutamate racemase [Bacillus anthracis str. Australia 94] Length = 276 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IQSNMYEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSAILQHKGILADNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259 >gi|224536359|ref|ZP_03676898.1| hypothetical protein BACCELL_01233 [Bacteroides cellulosilyticus DSM 14838] gi|224522019|gb|EEF91124.1| hypothetical protein BACCELL_01233 [Bacteroides cellulosilyticus DSM 14838] Length = 279 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 105/260 (40%), Gaps = 11/260 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + Sbjct: 6 PTIPGPIGVFDSGYGGLTILSKIREALPQYDYIYLGDNARSPYGTRSFEIVYEFTLQAVT 65 Query: 70 DILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123 + + L ++ACNTA +L P+ LG + P ++ T S + Sbjct: 66 RLFE-MGCHLVILACNTASAKALRSIQMNDLPEMDPARRVLGVIRPTVECIGNITHSRHV 124 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 IL+T T++ IH + + + S VE + ++K I Sbjct: 125 GILATAGTIKSESYPLEIHKLFPDIQVEGEACPLWVSLVENNEAEGDGTDYFVRKYINEL 184 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + ++ D ++L CTHYP+++ + P + + + +A + L R + Sbjct: 185 LS--KDEQIDTVILGCTHYPILLPKIEKYMPKGITTVAQGELVATSLKDYLQRHPEMDAK 242 Query: 244 --VFDDHALFLSGKPDIAMR 261 + + + + Sbjct: 243 CTKGGNCTYYTTEAEEKFTE 262 >gi|312143228|ref|YP_003994674.1| glutamate racemase [Halanaerobium sp. 'sapolanicus'] gi|311903879|gb|ADQ14320.1| glutamate racemase [Halanaerobium sp. 'sapolanicus'] Length = 291 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 13/262 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +I + DSG+GGL V +++ L+P IY D + PYG + +++ + + + + Sbjct: 5 KRAIGLLDSGVGGLTVAREIFKLLPGEDIIYYGDTLHLPYGPKKLSEVREYVENIIAYLK 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPAT 131 + VIACNT + D ++ F + G + A K+A +Q+ I+++ T T Sbjct: 65 QEKNVKAVVIACNTGSSAALDYVKQKF-EIPIFGMIDSAAKKAVKVSQNNKIAVIGTEGT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I ++ I + VE K E++K + Sbjct: 124 INSQAYQKAIKYESAESEIFAKACPGFVKLVEAG----KFSGPEVEKTAYRYLESIIKAK 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF------ 245 DV++L CTH+P ++ V ++ V ++ + A + R L + N +F Sbjct: 180 VDVLILGCTHFPYLMPVLAKVMGKDVMLVNPAQETALKFRKELNKANLLNKDIFLNKDIV 239 Query: 246 -DDHALFLSGKPDIAMRRLMQG 266 +H +S + I+ L G Sbjct: 240 EGEHKFIVSDESRISKSFLEHG 261 >gi|262172913|ref|ZP_06040591.1| glutamate racemase [Vibrio mimicus MB-451] gi|261893989|gb|EEY39975.1| glutamate racemase [Vibrio mimicus MB-451] Length = 265 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 134/257 (52%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E++ + DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELENILHPL-----KHTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGI--DKGEGENQKHHIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNIKLKELGFN 256 >gi|16273625|ref|NP_439883.1| glutamate racemase [Haemophilus influenzae Rd KW20] gi|6166587|sp|P52973|MURI_HAEIN RecName: Full=Glutamate racemase gi|3212239|gb|AAC23386.1| glutamate racemase (murI) [Haemophilus influenzae Rd KW20] Length = 269 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 9/270 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIH 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ Sbjct: 57 RTLAACQLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSS 175 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTH+PLI + P +++ S +IA+R + LL N Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMEPSAAIAKRIKYLLDDKNLQAQ 232 Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + P+ + ++ + +G +S Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262 >gi|315607047|ref|ZP_07882051.1| glutamate racemase [Prevotella buccae ATCC 33574] gi|315251101|gb|EFU31086.1| glutamate racemase [Prevotella buccae ATCC 33574] Length = 278 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 98/254 (38%), Gaps = 11/254 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + + + + Sbjct: 8 GPIGIFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGTRSFDVVYQFTRQAVIKLFE 67 Query: 74 KYQPVLSVIACNTAFTLIKDELR-----STFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ CNTA ++ P LG + P + T++ + + + Sbjct: 68 -MGCHLVILGCNTASAKALRSIQHRDIPELDPGRRVLGVIRPTAEVIGELTRNNHVGLFA 126 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+R + I + V+ VE + +KK ++ + + Sbjct: 127 TEGTVRSCSYNLEIGKLWPDIKVTGVACPFWVPLVEYNEADSPGADYFVKKRVDE--LMR 184 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVF 245 + D I+L CTHYPL++ + P V + + +A + R + Sbjct: 185 KDPEIDTIILGCTHYPLLMPKILKYVPPGVRIIPQGEYVADSLKAYFERHPAMERMCTRG 244 Query: 246 DDHALFLSGKPDIA 259 F + PD Sbjct: 245 GTCEYFTTENPDRF 258 >gi|282858901|ref|ZP_06268041.1| glutamate racemase [Prevotella bivia JCVIHMP010] gi|282588283|gb|EFB93448.1| glutamate racemase [Prevotella bivia JCVIHMP010] Length = 294 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 104/265 (39%), Gaps = 11/265 (4%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 N P + SI +FDSG GGL +L ++ ++PEY +IY+ D+ PYG+ + + Sbjct: 15 NMPFYPQQPGSIGVFDSGYGGLTILHGIQQVLPEYDYIYLGDNARAPYGSRSFEVVYEFT 74 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYT 118 + + L ++ CNTA ++ P LG + P + + T Sbjct: 75 RQAVLKLFE-MGCHLVILGCNTASAKALRTIQQNDLPKLAPDRRVLGVIRPTAEVIGSLT 133 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 S + IL+T T+R + I + +S + +E + +KK Sbjct: 134 SSRHVGILATEGTIRSQSYNIEIQKQSPDIQVTGLSCPLWVPIIENNEADSPGADYFVKK 193 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 I+ I + + D ++L CTHYP+++ + V + + +A + L R Sbjct: 194 RIDH--IMRLDPQIDTLILGCTHYPILMPKILKYVDRGVKIVPQGEYVAASLKDYLQRHP 251 Query: 239 THQTR--VFDDHALFLSGKPDIAMR 261 R + + P Sbjct: 252 EMDERCTKHSSTKYYTTESPTKFKE 276 >gi|145630715|ref|ZP_01786494.1| glutamate racemase [Haemophilus influenzae R3021] gi|144983841|gb|EDJ91291.1| glutamate racemase [Haemophilus influenzae R3021] Length = 269 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSECEEESIIH 56 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T++R Y LI + C + + + L E+ G + +K E+ Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTH+PLI + P ++D S +IA+R + LL N Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQ 232 Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 + + P+ + ++ + +G +S Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262 >gi|221068298|ref|ZP_03544403.1| glutamate racemase [Comamonas testosteroni KF-1] gi|220713321|gb|EED68689.1| glutamate racemase [Comamonas testosteroni KF-1] Length = 298 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 17/280 (6%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFL 67 + I IFDSG+GGL VLQ +R +P F+Y+AD PYG+ D +++R + + Sbjct: 1 MPTPHSPIGIFDSGVGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +L ++ + VIACNTA + +R P + +G PAIK A+ +Q+ + +++ Sbjct: 61 AQYLLQQHDIKILVIACNTATAAAVELMRERMPQLPVIGVEPAIKPASFSSQTHHVGVMA 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCF 184 T T+ + L+ + + HL + LA +E E A EI+ Sbjct: 121 TRGTVSSQRVARLVAEHGQRAEFHLQACDGLARAIEQSTEQALPEDASATEIRALCTKYT 180 Query: 185 IEK-----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + D +VL CTHY + R L + +LD +AR+ R +L + + Sbjct: 181 SALGSFGHKTGQMDTLVLGCTHYVFVKDDLRALLGPDIQFLDTGAPVARQTRRMLEQRHL 240 Query: 240 HQTRVFDDH--------ALFLSGKPDIAMRRLMQGFGLKS 271 L +G+ + L + Sbjct: 241 LGPETDGSRQLAQAEQIRLMTTGRLTAMQAAAQRWLDLPA 280 >gi|227513134|ref|ZP_03943183.1| glutamate racemase [Lactobacillus buchneri ATCC 11577] gi|227083709|gb|EEI19021.1| glutamate racemase [Lactobacillus buchneri ATCC 11577] Length = 264 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 9/253 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL VL+++ ++P +I+V D PYG ++K + +L K Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRKLTKRIADYML-KQNVK 59 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNT+ D L+ P + +G + P + A A T + I +++T T+ Sbjct: 60 MFVIACNTSTAASLDYLKKILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVSSGVY 118 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +I S + ++ + + VE G ++ +++ ++ K D +VL Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQLAY----FHDKSIDTLVL 174 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHALFLSGK 255 CTH+P++ + +D +D S A+ L + + ++ + F +G Sbjct: 175 GCTHFPVLEAEIKGAVNSGIDLIDPGISTAKSVADYLRSHHQMRDSSQFPQIKSFFTTGN 234 Query: 256 PDIAMRRLMQGFG 268 + + Q G Sbjct: 235 QNDFTKIADQLLG 247 >gi|254231591|ref|ZP_04924918.1| glutamate racemase murI [Mycobacterium tuberculosis C] gi|124600650|gb|EAY59660.1| glutamate racemase murI [Mycobacterium tuberculosis C] Length = 236 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 6/234 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ Sbjct: 6 APVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVG 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACN+A + + R + +PA+++A A T++G I ++ T AT+ Sbjct: 66 RGVKAL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATIT 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + I V+ VE + ++ +G + D Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAQGYLEPLQRAEVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 +VL CTHYPL+ + + V + +++ A+ +L I+ + Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPP 233 >gi|257438473|ref|ZP_05614228.1| glutamate racemase [Faecalibacterium prausnitzii A2-165] gi|257199052|gb|EEU97336.1| glutamate racemase [Faecalibacterium prausnitzii A2-165] Length = 274 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 98/261 (37%), Gaps = 11/261 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSG+GGL ++++R +P + +Y D PYG+ + + Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRRRLPHENIVYFGDTGRVPYGSRSPETILQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + +L K + AC T + P A ++AA T++ Sbjct: 53 YARQDIAFLLSK-DVKCIMAACGTVSSTYPAAEAEKLPVPYLGVVDAAAREAAFSTRNRR 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY--ACGIKIKEDEIKKEI 180 I ++ T AT+R L+ V I + VE K++ K I Sbjct: 112 IGVIGTAATIRSRSYEALLRRLVPGVEITARPCPLFVPLVEAGYVDHSAPDKQEITKLVI 171 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E D ++L CTHYPLI + + V +D + + A +L Sbjct: 172 AQYLTEIRDAGVDTLILGCTHYPLIKTMIGEFMGRNVVLVDPAKTAAHHLERILSERGLK 231 Query: 241 QTRVFDDHALFLSGKPDIAMR 261 ++S PD ++ Sbjct: 232 ADHPAGQAHFYVSDAPDGFVQ 252 >gi|289427817|ref|ZP_06429526.1| glutamate racemase [Propionibacterium acnes J165] gi|295131197|ref|YP_003581860.1| glutamate racemase [Propionibacterium acnes SK137] gi|289158999|gb|EFD07194.1| glutamate racemase [Propionibacterium acnes J165] gi|291377076|gb|ADE00931.1| glutamate racemase [Propionibacterium acnes SK137] gi|313773262|gb|EFS39228.1| glutamate racemase [Propionibacterium acnes HL074PA1] gi|313793455|gb|EFS41506.1| glutamate racemase [Propionibacterium acnes HL110PA1] gi|313801146|gb|EFS42409.1| glutamate racemase [Propionibacterium acnes HL110PA2] gi|313808495|gb|EFS46960.1| glutamate racemase [Propionibacterium acnes HL087PA2] gi|313812068|gb|EFS49782.1| glutamate racemase [Propionibacterium acnes HL083PA1] gi|313819230|gb|EFS56944.1| glutamate racemase [Propionibacterium acnes HL046PA2] gi|313821098|gb|EFS58812.1| glutamate racemase [Propionibacterium acnes HL036PA1] gi|313823476|gb|EFS61190.1| glutamate racemase [Propionibacterium acnes HL036PA2] gi|313827021|gb|EFS64735.1| glutamate racemase [Propionibacterium acnes HL063PA1] gi|313829865|gb|EFS67579.1| glutamate racemase [Propionibacterium acnes HL007PA1] gi|313834707|gb|EFS72421.1| glutamate racemase [Propionibacterium acnes HL056PA1] gi|313837924|gb|EFS75638.1| glutamate racemase [Propionibacterium acnes HL086PA1] gi|314925917|gb|EFS89748.1| glutamate racemase [Propionibacterium acnes HL036PA3] gi|314960892|gb|EFT04993.1| glutamate racemase [Propionibacterium acnes HL002PA2] gi|314963344|gb|EFT07444.1| glutamate racemase [Propionibacterium acnes HL082PA1] gi|314974021|gb|EFT18117.1| glutamate racemase [Propionibacterium acnes HL053PA1] gi|314975447|gb|EFT19542.1| glutamate racemase [Propionibacterium acnes HL045PA1] gi|314979454|gb|EFT23548.1| glutamate racemase [Propionibacterium acnes HL072PA2] gi|314988438|gb|EFT32529.1| glutamate racemase [Propionibacterium acnes HL005PA2] gi|314988643|gb|EFT32734.1| glutamate racemase [Propionibacterium acnes HL005PA3] gi|315083402|gb|EFT55378.1| glutamate racemase [Propionibacterium acnes HL027PA2] gi|315086803|gb|EFT58779.1| glutamate racemase [Propionibacterium acnes HL002PA3] gi|315089450|gb|EFT61426.1| glutamate racemase [Propionibacterium acnes HL072PA1] gi|315097779|gb|EFT69755.1| glutamate racemase [Propionibacterium acnes HL038PA1] gi|327325396|gb|EGE67201.1| glutamate racemase [Propionibacterium acnes HL096PA2] gi|327328265|gb|EGE70029.1| glutamate racemase [Propionibacterium acnes HL096PA3] gi|327443689|gb|EGE90343.1| glutamate racemase [Propionibacterium acnes HL043PA1] gi|327449226|gb|EGE95880.1| glutamate racemase [Propionibacterium acnes HL043PA2] gi|327450180|gb|EGE96834.1| glutamate racemase [Propionibacterium acnes HL013PA2] gi|327451244|gb|EGE97898.1| glutamate racemase [Propionibacterium acnes HL092PA1] gi|328756764|gb|EGF70380.1| glutamate racemase [Propionibacterium acnes HL020PA1] gi|328761038|gb|EGF74590.1| glutamate racemase [Propionibacterium acnes HL099PA1] Length = 284 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VE+ E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ + D Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESGLLHSHPRD 237 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|119356253|ref|YP_910897.1| glutamate racemase [Chlorobium phaeobacteroides DSM 266] gi|166231032|sp|A1BDJ6|MURI_CHLPD RecName: Full=Glutamate racemase gi|119353602|gb|ABL64473.1| glutamate racemase [Chlorobium phaeobacteroides DSM 266] Length = 272 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 7/254 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + ++ I IFDSG+GGL V++ ++ MP IY D PYG ++K Sbjct: 5 KATPESPIGIFDSGVGGLTVVRAIQAEMPAERIIYFGDTARVPYGTKSPATIRKYAHE-D 63 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILS 127 + IL + P + ++ACNT L D + T S+ +G + A A T++ + ++ Sbjct: 64 TAILMSHLPKIIIVACNTVSALALDVVEKTAGSIPVIGVLKAGADLAVQVTRNKHVGVIG 123 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ ++ I + + + + EE + + Sbjct: 124 TQATVSSNAYADAITLLDANIEVVSKACPLFVPLAEEGFT----EHAATRLIASDYLAAF 179 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246 +G D +VL CTHYP++ HV + + +D+++++A R R LL T Sbjct: 180 DGHDIDTLVLGCTHYPILRHVITETLHRDIRIIDSAEAVAGRTRKLLADAKLLSTEKHAP 239 Query: 247 DHALFLSGKPDIAM 260 L +S P Sbjct: 240 PPHLLVSDLPQKFS 253 >gi|47564795|ref|ZP_00235839.1| glutamate racemase [Bacillus cereus G9241] gi|47558168|gb|EAL16492.1| glutamate racemase [Bacillus cereus G9241] Length = 276 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 7/258 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVAEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA + L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAVALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGL 269 +G + G Sbjct: 241 TTGSALSFEHIAERWLGY 258 >gi|258622814|ref|ZP_05717831.1| glutamate racemase [Vibrio mimicus VM573] gi|258584875|gb|EEW09607.1| glutamate racemase [Vibrio mimicus VM573] Length = 265 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 134/257 (52%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E++ + DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELENILHPL-----KHAIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGI--DKGEGENQKHHIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNIKLKELGFN 256 >gi|229095486|ref|ZP_04226477.1| Glutamate racemase [Bacillus cereus Rock3-29] gi|228688032|gb|EEL41919.1| Glutamate racemase [Bacillus cereus Rock3-29] Length = 275 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IQSNMYEKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVLSFEHIAERWLGYE 259 >gi|210632427|ref|ZP_03297355.1| hypothetical protein COLSTE_01251 [Collinsella stercoris DSM 13279] gi|210159522|gb|EEA90493.1| hypothetical protein COLSTE_01251 [Collinsella stercoris DSM 13279] Length = 292 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 100/259 (38%), Gaps = 18/259 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL V + + +P YV D PYG + ++ ++ L Sbjct: 5 ERPIGVFDSGLGGLTVARCIAESLPHESIYYVGDTKRCPYGVRSEEEVRAFVLQ-AGHWL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ + VIACNTA + P + +G + P + A T++ + +L+TP T Sbjct: 64 AEHDVKIMVIACNTATAAGLRIAQQILP-VPVIGVIAPGARAAINSTRTRKVGVLATPLT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC------------GIKIKEDEIKKE 179 +R + I + +++ + VE G E + E Sbjct: 123 VRTGAYTRAIQDLDAGVNVYGCPAPSFVEIVERELATGAHLQERWLQDGDIFDTPENRAE 182 Query: 180 IEGCFIEKE--GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 +E G + D +VL CTH+PL+ R V + +++ R +L R Sbjct: 183 VERTLAPIVEGGAQVDTVVLGCTHFPLLAGPIRHALGPDVRVVSSAEETTRELEDILRRR 242 Query: 238 NTHQT-RVFDDHALFLSGK 255 N H + Sbjct: 243 NQLAGIGHRPTHRFATTSD 261 >gi|229137668|ref|ZP_04266273.1| Glutamate racemase [Bacillus cereus BDRD-ST26] gi|228645783|gb|EEL02012.1| Glutamate racemase [Bacillus cereus BDRD-ST26] Length = 283 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 106/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V +++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 15 HSVIGVLDSGVGGLTVAREIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 73 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 74 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 132 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE +++K+ + + Sbjct: 133 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTKED 188 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++ CTHYPL+ ++ V + +++ A +L + +H F Sbjct: 189 IDTLIPGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHQFF 248 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 249 TTGSVSSFEHIAERWLGYQ 267 >gi|332345964|gb|AEE59298.1| glutamate racemase MurI [Escherichia coli UMNK88] Length = 262 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 81/254 (31%), Positives = 136/254 (53%), Gaps = 4/254 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTT 238 Query: 257 D-IAMRRLMQGFGL 269 + + ++Q +G Sbjct: 239 EAEQLLPVLQRYGF 252 >gi|26250744|ref|NP_756784.1| glutamate racemase [Escherichia coli CFT073] gi|26111175|gb|AAN83358.1|AE016770_158 Glutamate racemase [Escherichia coli CFT073] Length = 285 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 141/264 (53%), Gaps = 4/264 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + ++L+FDSG+G L V ++R L+P+ H+IY D+V FPYG + + +R++ + Sbjct: 17 PSEPXPTVLVFDSGVGXLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIV 76 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T Sbjct: 77 TAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLAT 135 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R+YT LI + ++C I ++ S + E G + D +K+ + KE Sbjct: 136 RGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKE 195 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D +VL CTH+PL+ Q+ P +D+ +IARR LL + Sbjct: 196 P--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANI 253 Query: 249 ALFLSGKPD-IAMRRLMQGFGLKS 271 A ++ P+ + ++Q +G ++ Sbjct: 254 AFCMAMTPEAEQLLPVLQRYGFET 277 >gi|329956144|ref|ZP_08296867.1| glutamate racemase [Bacteroides clarus YIT 12056] gi|328524730|gb|EGF51788.1| glutamate racemase [Bacteroides clarus YIT 12056] Length = 279 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R +PEY ++Y+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPEYDYVYLGDNARAPYGTRSFEVVYEFTLQAVTKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P+ LG + P ++ T+S + +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPHLDPARRVLGVIRPTVECIGNITRSRHVGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + + + S VE + I+K I Sbjct: 129 TGGTIKSESYPLEIHKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFIRKYINELLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D +L CTHYP+++ RQ P + + +A + L R + Sbjct: 187 KDREIDTAILGCTHYPILLPKIRQYMPDGITIVSQGKLVADSLKDYLRRHPEIDAKCTQG 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + + Sbjct: 247 GECTYYTTEAEEKFVE 262 >gi|262392932|ref|YP_003284786.1| glutamate racemase [Vibrio sp. Ex25] gi|262336526|gb|ACY50321.1| glutamate racemase [Vibrio sp. Ex25] Length = 267 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 10/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLISRVNQLVSSLV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + L+ S L EE G + DE+ K + + Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGNSVSLDELTKILLPL-----RDKV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV VL CTH+PLI Q V +D+ +IARR + LL T +++ Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGEDVTLIDSGAAIARRVKALLLSDEIEDTEE-GSKSIYA 237 Query: 253 SGKP--DIAMRRLMQGFGLK 270 S P + A+ ++ G Sbjct: 238 SATPWQEDALNICLKELGFN 257 >gi|317131748|ref|YP_004091062.1| glutamate racemase [Ethanoligenens harbinense YUAN-3] gi|315469727|gb|ADU26331.1| glutamate racemase [Ethanoligenens harbinense YUAN-3] Length = 271 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 12/260 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSG+GGL V++ + +P IY D PYG + + K Sbjct: 1 MDNRP--------IGVFDSGLGGLTVIRALERTLPHEDLIYFGDTGRVPYGTKGNDTIVK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + L + +IACNT ++ +E+ + F PA++ A T+ G Sbjct: 53 YSEQIV-RFLRGFDVKAILIACNTVSSVAFEEVCAQAGVPVFGVVEPAVEAAVRTTRGGE 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L T AT+R IH Y+ + + + VE + E+ Sbjct: 112 ILVLGTSATVRSGAYEQAIHRYLPDAGVRSRACPLFVPLVENGHFAAGDQLAELAAH--E 169 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 G+ D ++L CTHYP++ + ++ V+ +D+ +A RA + Sbjct: 170 YLDSFIGQGVDTVILGCTHYPILRSLIAKIMGGQVELVDSGCEMAVRAAVAMDERGLLTD 229 Query: 243 RVFDDHA-LFLSGKPDIAMR 261 R ++S + R Sbjct: 230 REEPGRQNFYVSDYSEDFTR 249 >gi|227524349|ref|ZP_03954398.1| glutamate racemase [Lactobacillus hilgardii ATCC 8290] gi|227088580|gb|EEI23892.1| glutamate racemase [Lactobacillus hilgardii ATCC 8290] Length = 264 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 9/253 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL VL+++ ++P +I+V D PYG ++K + +L K Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRKLTKRIADYML-KQNVK 59 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNT+ D L+ P + +G + P + A A T + I +++T T+ Sbjct: 60 MFVIACNTSTAASLDYLKRILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVSSGVY 118 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +I S + ++ + + VE G ++ +++ ++ K D +VL Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQLAY----FHDKSIDTLVL 174 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHALFLSGK 255 CTH+P++ + +D +D S A+ L + + ++ + F +G Sbjct: 175 GCTHFPVLEAEIKGAVNSGIDLIDPGISTAKSVADYLRSHHQMRDSSQFPQIKSFFTTGN 234 Query: 256 PDIAMRRLMQGFG 268 + + Q G Sbjct: 235 QNDFTKIADQLLG 247 >gi|329947436|ref|ZP_08294640.1| glutamate racemase [Actinomyces sp. oral taxon 170 str. F0386] gi|328525186|gb|EGF52237.1| glutamate racemase [Actinomyces sp. oral taxon 170 str. F0386] Length = 280 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 12/257 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++D+ Sbjct: 1 MFDSGVGGLTVARSVLDQLPHERVLYIGDTANGPYGPRDIAEVRSLALSIMDELVDRG-V 59 Query: 78 VLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA + + R + + + + PA + AA T++G + +++T T+ Sbjct: 60 KLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGRVGLIATRGTVD 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + V + + E E+ E + D Sbjct: 120 SRAYDDALQA-VPGVELFSQACPRFVELAERGVT----TGPEVLDVAEEYLAPIKAAGVD 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDHALF 251 ++L CTHYPL+V + V + +SD A+ L R N + H Sbjct: 175 TLILGCTHYPLLVGPISYVMGEEVALVTSSDETAKDVYRALARRNLLRGPEACEPRHEFR 234 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P+ + G Sbjct: 235 STGDPEAFSVLARRFLG 251 >gi|262280557|ref|ZP_06058341.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202] gi|262258335|gb|EEY77069.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202] Length = 266 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 6/249 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + N I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNQKNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + + VIACNT + + +R+ ++ + PA+K A A T S I++L+T Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAMTMSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ NLI +Y + LV + LA ++E E+K ++ Sbjct: 120 ATTVKGKNLQNLIETYAQNIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + ++ + L + ++ S+++ A+ R L + ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSNIIQDLVGSNIQIIEPSEAVTAQLIRQLNQYKLSSESPNEGN 235 Query: 248 HALFLSGKP 256 H ++ S P Sbjct: 236 HIIWTSSDP 244 >gi|188994603|ref|YP_001928855.1| glutamate racemase [Porphyromonas gingivalis ATCC 33277] gi|188594283|dbj|BAG33258.1| glutamate racemase [Porphyromonas gingivalis ATCC 33277] Length = 274 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 12/257 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +SI IFDSG GGL +L ++R LMPEY+F+Y+ D+ PYGN + K + + Sbjct: 1 MNSSIGIFDSGYGGLTILSEIRRLMPEYNFVYLGDNARSPYGNRSYEVVYKFTLQAVRKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRST------FPSMAFLGAV-PAIKQAAAYTQSGLIS 124 + P L ++ACNTA ++ P+ LG + P ++ T++ + Sbjct: 61 FELGCP-LVILACNTASAKALRTIQQRDLPNMEDPTRRVLGIIRPTVEAVDEITRTKHVG 119 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+T T+ I + + + + VE + I+K ++ Sbjct: 120 VLATQGTVSSHSYQLEIAKLFPEISVTEEACPMWVPLVETGESDSPGADYFIRKHLDSII 179 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + D I+LACTHYPL+ ++L + + + +A + L R R+ Sbjct: 180 A--KDDTIDTIILACTHYPLLRPKMKRLLTPTIKLIAQGELVAHSLKDYLSRHPEMDRRI 237 Query: 245 F--DDHALFLSGKPDIA 259 + + + PD Sbjct: 238 EKGGKTSYYTTESPDKF 254 >gi|90581103|ref|ZP_01236903.1| glutamate racemase [Vibrio angustum S14] gi|90437799|gb|EAS62990.1| glutamate racemase [Vibrio angustum S14] Length = 270 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 78/221 (35%), Positives = 126/221 (57%), Gaps = 6/221 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D+ L +R + S +++ Sbjct: 5 KKIVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELADNILIERTNHIVSALVE 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +Y+ L VIACNTA T++ LR ++ +G VPAIK AA + + +I +L+TPAT++ Sbjct: 65 QYKADLVVIACNTASTIVLPTLRQNL-NIPIVGVVPAIKPAAKLSNTKVIGLLATPATVK 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT LI+ + S C + ++ S L E+ G I +E+ + + ++ D Sbjct: 124 REYTQQLINQFASDCEVKMIGSTRLVEMAEQKLRGESISLNELSEILAPW-----QQQVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 I+L CTH+PLI + + V +D+ +IA R LL Sbjct: 179 SIILGCTHFPLIKEEIKAVLRNEVSVVDSGKAIALRVSSLL 219 >gi|323343637|ref|ZP_08083864.1| glutamate racemase [Prevotella oralis ATCC 33269] gi|323095456|gb|EFZ38030.1| glutamate racemase [Prevotella oralis ATCC 33269] Length = 280 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 104/269 (38%), Gaps = 17/269 (6%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MK+ P I +FDSG GGL +L +R L+P Y ++Y+ D+ PYG+ + Sbjct: 1 MKLSQVP------GPIGVFDSGYGGLTILHGIRQLLPRYDYMYLGDNARAPYGSRSFDVV 54 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL-RSTFPS----MAFLGAV-PAIKQA 114 + + + + L ++ CNTA + R P LG + P + Sbjct: 55 YEFTRQAVAKLFE-MGCHLVILGCNTASAKALRTIQRQDLPVWDAERRVLGVIRPTAEVI 113 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 T+S + +L+T T+R I + V + +E + Sbjct: 114 GTLTKSRHVGLLATEGTVRSESYKLEIRKLYPDIKVTGVPCPLWVPIIENNEADSPGADY 173 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 ++K I + + D I+L CTHYPL++ + V + + +A+ + L Sbjct: 174 FVQKSIHQ--LMTLDPQIDTIILGCTHYPLLMPKISKYVGKGVRVVPQGEYVAKSLKDYL 231 Query: 235 PRINTHQTR--VFDDHALFLSGKPDIAMR 261 R T + + F + P+ Sbjct: 232 HRHETIEKKCTKEGTCRYFTTENPEKFKE 260 >gi|227544196|ref|ZP_03974245.1| glutamate racemase [Lactobacillus reuteri CF48-3A] gi|300908191|ref|ZP_07125657.1| glutamate racemase [Lactobacillus reuteri SD2112] gi|227185832|gb|EEI65903.1| glutamate racemase [Lactobacillus reuteri CF48-3A] gi|300894618|gb|EFK87974.1| glutamate racemase [Lactobacillus reuteri SD2112] Length = 267 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 6/255 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V++ +R +P+ I+V D FPYG +++ + + +L Sbjct: 3 KRPIGVMDSGLGGLSVIRVLREQLPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + +IACNTA L++ P + +G + AA I ++ T +T+ Sbjct: 63 EQ-DVKMMIIACNTATAAALRLLQNELP-IPVIGVIEPGAMAATQHHYKKIGVIGTESTI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + + L S VE G E +K ++ + + Sbjct: 121 KNGAYAKTLAKLNPDLSVISSPAQPLVSIVEHGQTGT----SEAQKAVDTELEVFDNQSI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 + ++L CTH+P + V +D + R+A+ LL N + L+ Sbjct: 177 EALILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTGKNQLSDNLASSINLYS 236 Query: 253 SGKPDIAMRRLMQGF 267 +G + Q Sbjct: 237 TGDAKDLVAGAQQWL 251 >gi|294674929|ref|YP_003575545.1| glutamate racemase [Prevotella ruminicola 23] gi|294473325|gb|ADE82714.1| glutamate racemase [Prevotella ruminicola 23] Length = 277 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 11/258 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + + + + Sbjct: 7 GPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGPRSFDVVYEFTRQAVVKLFE 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ CNTA ++ P LG + P + T S + +L+ Sbjct: 67 -MGCHLVILGCNTASAKALRTIQQNDLPKIDPERRVLGIIRPTAEVIGDLTTSKHVGVLA 125 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + V+ VE + +KK I+ I + Sbjct: 126 TEGTIKSESYDLEIHKLFPDIKVSGVACPFWVPLVEYNEADSPGADYFVKKRIDE--IMR 183 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + D I+L CTHYPL++ + P V + + +A + L R + + Sbjct: 184 KDPDIDTIILGCTHYPLLMPKILKYLPAGVRVVPQGEYVAESLKQYLERHPNIEAKCSKG 243 Query: 246 DDHALFLSGKPDIAMRRL 263 + P+ + Sbjct: 244 AGVHYLTTENPNKFKEQA 261 >gi|254725743|ref|ZP_05187525.1| glutamate racemase [Bacillus anthracis str. A1055] Length = 276 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 104/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IQSNMYEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTFLQHKGILADNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259 >gi|121610154|ref|YP_997961.1| glutamate racemase [Verminephrobacter eiseniae EF01-2] gi|121554794|gb|ABM58943.1| glutamate racemase [Verminephrobacter eiseniae EF01-2] Length = 301 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 15/275 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 Q I +FDSG+GGL VL +R +P F+Y+AD PYG + R + + + Sbjct: 18 PQQPIGVFDSGVGGLSVLHALRAALPRERFVYLADSANAPYGERAAAQVSARTLAITGYL 77 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ V+ACNTA DELR P + +G PA+K A A TQ+G + ++ T T Sbjct: 78 RAQHRIKALVVACNTATAAAIDELRQRHPGLPLVGLEPALKPALALTQTGHVGVIGTRGT 137 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC------GIKIKEDEIKKEIEGC-F 184 L L+ S + H L LA +E G ++ + Sbjct: 138 LGSAKFGKLLASLADRAHFVLQPCDGLAHAIERSVLSTAPVSGSTETGALCQRYLHAMGT 197 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 K + D +VL CTHY + R L V +++ +AR+ R LL + + Sbjct: 198 FGKAPGQIDTLVLGCTHYLFVTDELRALLGPGVQFVETGAPVARQTRRLLETAGLLRNGL 257 Query: 245 FD--------DHALFLSGKPDIAMRRLMQGFGLKS 271 + L +G + + GL + Sbjct: 258 REPQAAAETAGTRLLTTGPAAMLQAAAQRWLGLPA 292 >gi|260556259|ref|ZP_05828478.1| glutamate racemase [Acinetobacter baumannii ATCC 19606] gi|260410314|gb|EEX03613.1| glutamate racemase [Acinetobacter baumannii ATCC 19606] Length = 288 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 12/266 (4%) Query: 7 PCEKKL-QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K L I IFDSGIGG+ V ++ +P +Y AD PYG D +++ Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124 D L + ++V+ACNTA D LR + +G VPA+K A T+S +++ Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+TPAT R +++ + + + ++S+ L VE + + +++ ++ Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ- 190 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYP + L +D+ ++AR+ +L + Sbjct: 191 ---PAVEQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCD 247 Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265 + + A ++SG A++ ++Q Sbjct: 248 QTRQNVARIECYVSGNNADALQPVLQ 273 >gi|238021903|ref|ZP_04602329.1| hypothetical protein GCWU000324_01807 [Kingella oralis ATCC 51147] gi|237866517|gb|EEP67559.1| hypothetical protein GCWU000324_01807 [Kingella oralis ATCC 51147] Length = 266 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N I +FDSG+GGL V++ + +P + +Y D PYG ++ + +L Sbjct: 4 NPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRSTIETFTAQIVDFLL- 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATL 132 + Q VIACNT + ++ +M L + A QAA A T++G I +++T T+ Sbjct: 63 QNQVKALVIACNTIAAVAHQRVQQMAGNMPVLSVIEAGAQAALATTRNGNIGVIATSTTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I + + I ++ +L VEE ++ +++ + +K Sbjct: 123 NSNAYARAISARNADTRILSQAAPLLVPLVEEGWLEHEVTRLTVREYLRPLLADK----I 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALF 251 D ++L CTH+PL+ + +Q +P ++ +D+S + A A L + T+ D+ + Sbjct: 179 DTLILGCTHFPLLKPLIKQEAP-HIELVDSSTTTAEAAAQALATADLLNTQTAAPDYRFY 237 Query: 252 LSGKPDIAMRRLMQGFG 268 +S P + G Sbjct: 238 VSDIPLRFQTIGERFLG 254 >gi|313828237|gb|EFS65951.1| glutamate racemase [Propionibacterium acnes HL063PA2] gi|315110459|gb|EFT82435.1| glutamate racemase [Propionibacterium acnes HL030PA2] Length = 284 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VEE E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ + + Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDDVTLISSSHQCARASYSLMVESGLLHSHPRE 237 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|310778213|ref|YP_003966546.1| glutamate racemase [Ilyobacter polytropus DSM 2926] gi|309747536|gb|ADO82198.1| glutamate racemase [Ilyobacter polytropus DSM 2926] Length = 270 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 104/268 (38%), Gaps = 17/268 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN I +FDSG GGL V+++++ ++P Y D PYG+ + Sbjct: 1 MDNR--------GIGVFDSGFGGLTVVKEIKKVLPGEKIYYFGDTARLPYGSKSKENIIH 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-KQAAAYTQSG 121 + + + L V+ACNTA DEL+ S +G + A ++A T++G Sbjct: 53 YSLEIA-EFLKTKDIKALVVACNTASAFALDELKKHC-SFPVIGVIEAGSRRALGITKNG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + I+ T T+ + ++ + VEE ++ E I + + Sbjct: 111 KVGIIGTKGTVSSGVYDRSLSKGRKGIEVYSKPCPLFVPLVEEGMVQDEVTEIMIDRYLR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTH 240 + D +++ CTHYPL+ ++ ++ ++ + A LL Sbjct: 171 EF-----KNKVDSLIMGCTHYPLLEDEIKRYFEKYELEVVNPAVETALELEKLLAEKAIL 225 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFG 268 + + ++S P+ G Sbjct: 226 SKKSNGEIEFYVSDSPNHFKELGEMFLG 253 >gi|269968664|ref|ZP_06182661.1| glutamate racemase [Vibrio alginolyticus 40B] gi|269826751|gb|EEZ81088.1| glutamate racemase [Vibrio alginolyticus 40B] Length = 267 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 10/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLISRVNQLVSSLV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + LV S L EE G + DE+ + + Sbjct: 124 TRQYTHELIRDFAQGKPVELVGSTRLVDMAEEKLRGNSVSLDELTNILLPL-----RDKV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV VL CTH+PLI Q V +D+ +IARR + LL T +++ Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGGDVTLIDSGAAIARRVKALLLSDEIEDTEE-GSKSIYA 237 Query: 253 SGKP--DIAMRRLMQGFGLK 270 S P + A+ ++ G Sbjct: 238 SATPWQEDALNICLKKLGFN 257 >gi|217958454|ref|YP_002337002.1| glutamate racemase [Bacillus cereus AH187] gi|217063367|gb|ACJ77617.1| glutamate racemase [Bacillus cereus AH187] Length = 275 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 106/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V +++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVAREIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE +++K+ + + Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++ CTHYPL+ ++ V + +++ A +L + +H F Sbjct: 181 IDTLIPGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHQFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259 >gi|304385230|ref|ZP_07367575.1| glutamate racemase [Pediococcus acidilactici DSM 20284] gi|304328437|gb|EFL95658.1| glutamate racemase [Pediococcus acidilactici DSM 20284] Length = 265 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 17/267 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++ + LMP +++ D+ PYG + K Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKAAKELMPNEAVVFIGDEARVPYGPRPTAEVIK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + ++ K VIACNTA L +T P + +G + P + A A T++ Sbjct: 53 FSQQMADFLVKK-DVKALVIACNTATNAAFQILSTTLP-IPVIGVIQPGAQAAVATTRNN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T T++ S + + Q + V+ E ++ E + I+ Sbjct: 111 RIGVIATEGTIKSQAYSTALAALAPQTEVFPVACQSFVELAEHN----QLTTPEALQVID 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + + D +VL CTH+PL+ + V +D + ++ + +L R + Sbjct: 167 QQLVGLKNQGIDTLVLGCTHFPLLAKGIQTAVGDQVKLVDPGVAAVQQLKDVLERQGLLR 226 Query: 242 TRVF-DDHALFLSGKPDIAMRRLMQGF 267 D F + + R + Q F Sbjct: 227 EATSTPDEQYFATANI-ASFRTIAQSF 252 >gi|295100376|emb|CBK97921.1| glutamate racemase [Faecalibacterium prausnitzii L2-6] Length = 274 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 99/261 (37%), Gaps = 11/261 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSG+GGL ++++R +P + +Y D PYG+ + + Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPNENIVYFGDTGRVPYGSRSPETILQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + +L K + AC T ++ + P A ++AA T++ Sbjct: 53 YARQDIAFLLSK-DVKCIMAACGTVSSIYPAAEAAKLPVPYLGVVDAAAREAAFVTRNRR 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI-KIKEDEIKK-EI 180 I ++ T AT+R ++ V I + VE + + ++ + I Sbjct: 112 IGVIGTAATIRSRSYETVLRKLVPGVEITAQPCPLFVPLVEAGYVDHSALDKQQVTRLVI 171 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E D ++L CTHYPLI + V +D + + A L Sbjct: 172 AQYLAEVREAGVDTLILGCTHYPLIKEMIGWYMGRNVTLVDPAQTAAHHLERTLSERGLK 231 Query: 241 QTRVFDDHALFLSGKPDIAMR 261 + ++S PD + Sbjct: 232 GNHEKGEAHFYVSDVPDSFAQ 252 >gi|34540498|ref|NP_904977.1| glutamate racemase [Porphyromonas gingivalis W83] gi|34396811|gb|AAQ65876.1| glutamate racemase [Porphyromonas gingivalis W83] Length = 274 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 12/257 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + SI IFDSG GGL +L ++R LMPEY+F+Y+ D+ PYGN + K + + Sbjct: 1 MNPSIGIFDSGYGGLTILSEIRKLMPEYNFVYLGDNARSPYGNRSYEVVYKFTLQAVRKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRST------FPSMAFLGAV-PAIKQAAAYTQSGLIS 124 + P L ++ACNTA ++ P+ LG + P ++ T++ + Sbjct: 61 FELGCP-LVILACNTASAKALRTIQQRDLPNMEDPTRRVLGIIRPTVEAVDEITRTKHVG 119 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+T T+ I + + + + VE + I+K ++ Sbjct: 120 VLATQGTVSSHSYQLEIAKLFPEISVTEEACPMWVPLVETGESDSPGADYFIRKHLDSII 179 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + D I+LACTHYPL+ ++L + + + +A + L R R+ Sbjct: 180 A--KDDTIDTIILACTHYPLLRPKMKRLLTPTIKLIAQGELVAHSLKDYLSRHPEMDRRI 237 Query: 245 F--DDHALFLSGKPDIA 259 + + + PD Sbjct: 238 EKGGKTSYYTTESPDKF 254 >gi|332676074|gb|AEE72890.1| glutamate racemase [Propionibacterium acnes 266] Length = 297 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 17 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQ 76 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 77 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 135 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VE+ E++ Sbjct: 136 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 190 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ + D Sbjct: 191 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESGLLHSHPRD 250 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 251 SSRYFLTTGNAERFEKLGRRLMEGF 275 >gi|229028645|ref|ZP_04184759.1| Glutamate racemase [Bacillus cereus AH1271] gi|228732664|gb|EEL83532.1| Glutamate racemase [Bacillus cereus AH1271] Length = 281 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 10 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 68 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 69 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE +++K+ + + Sbjct: 128 IQSNMYEKALHELDTYLEVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTKED 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 184 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDDLNPKHRFF 243 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 244 TTGYALSFGHIAERWLGYQ 262 >gi|115523653|ref|YP_780564.1| glutamate racemase [Rhodopseudomonas palustris BisA53] gi|115517600|gb|ABJ05584.1| glutamate racemase [Rhodopseudomonas palustris BisA53] Length = 278 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 107/257 (41%), Positives = 154/257 (59%), Gaps = 4/257 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL VL+++ L P+ H++YVADD FPYG + A+ R++ L +++ Sbjct: 5 PTILVFDSGLGGLTVLREITKLRPDAHYVYVADDAFFPYGQHGEEAIIARVVPLIGEMIA 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + P L VIACNTA TL+ LR+ + + F+G VPAIK A A +QS +S+L T T++ Sbjct: 65 AHAPDLVVIACNTASTLVLSHLRAAY-GVPFVGTVPAIKPACAGSQSKRVSVLGTRGTVQ 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI--EKEGKR 191 R YT LI + C + LV S LA+ E G ++ + EI EI CF+ G R Sbjct: 124 REYTKALIRDFAQNCAVTLVGSAHLAALAEAALGGAEVTDAEILAEIAPCFVAEPDHGPR 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 TD +VLACTHYPL++ +L+PWPV+W+D + +IARR LL + H R + Sbjct: 184 TDTVVLACTHYPLLLDRLERLAPWPVNWIDPAPAIARRVSTLLAGVQGHADRAGAQM-IM 242 Query: 252 LSGKPDIAMRRLMQGFG 268 SG+P L+ FG Sbjct: 243 TSGRPHPLASVLLPFFG 259 >gi|315093634|gb|EFT65610.1| glutamate racemase [Propionibacterium acnes HL060PA1] Length = 284 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VEE E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ + + Sbjct: 178 IQEADCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 237 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|262163706|ref|ZP_06031447.1| glutamate racemase [Vibrio mimicus VM223] gi|262027922|gb|EEY46586.1| glutamate racemase [Vibrio mimicus VM223] Length = 265 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V Q++ +P+ +IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYQEIEARLPQLSYIYLFDNAAYPYGELAQETLIARVNTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT LI + + ++ L+ S L + EE G + +E++ + DV Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELESILHPL-----KHTIDVA 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGI--DKGEGENQKHHIYASAP 239 Query: 256 P--DIAMRRLMQGFGLK 270 P + A+ ++ G Sbjct: 240 PWEESALNIKLKELGFN 256 >gi|289424939|ref|ZP_06426718.1| glutamate racemase [Propionibacterium acnes SK187] gi|289154638|gb|EFD03324.1| glutamate racemase [Propionibacterium acnes SK187] gi|313763385|gb|EFS34749.1| glutamate racemase [Propionibacterium acnes HL013PA1] gi|313814691|gb|EFS52405.1| glutamate racemase [Propionibacterium acnes HL059PA1] gi|314914537|gb|EFS78368.1| glutamate racemase [Propionibacterium acnes HL005PA4] gi|314917605|gb|EFS81436.1| glutamate racemase [Propionibacterium acnes HL050PA1] gi|314919639|gb|EFS83470.1| glutamate racemase [Propionibacterium acnes HL050PA3] gi|314924269|gb|EFS88100.1| glutamate racemase [Propionibacterium acnes HL001PA1] gi|314956853|gb|EFT01007.1| glutamate racemase [Propionibacterium acnes HL027PA1] gi|314957644|gb|EFT01747.1| glutamate racemase [Propionibacterium acnes HL002PA1] gi|314967393|gb|EFT11492.1| glutamate racemase [Propionibacterium acnes HL082PA2] gi|314968973|gb|EFT13071.1| glutamate racemase [Propionibacterium acnes HL037PA1] gi|315098010|gb|EFT69986.1| glutamate racemase [Propionibacterium acnes HL059PA2] gi|315102644|gb|EFT74620.1| glutamate racemase [Propionibacterium acnes HL046PA1] gi|315104465|gb|EFT76441.1| glutamate racemase [Propionibacterium acnes HL050PA2] gi|315106208|gb|EFT78184.1| glutamate racemase [Propionibacterium acnes HL030PA1] gi|327325474|gb|EGE67278.1| glutamate racemase [Propionibacterium acnes HL103PA1] gi|327451223|gb|EGE97877.1| glutamate racemase [Propionibacterium acnes HL087PA3] gi|327452580|gb|EGE99234.1| glutamate racemase [Propionibacterium acnes HL083PA2] gi|328751976|gb|EGF65592.1| glutamate racemase [Propionibacterium acnes HL025PA2] gi|328754780|gb|EGF68396.1| glutamate racemase [Propionibacterium acnes HL087PA1] Length = 284 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VEE E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ + + Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 237 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|237725975|ref|ZP_04556456.1| glutamate racemase [Bacteroides sp. D4] gi|229435783|gb|EEO45860.1| glutamate racemase [Bacteroides dorei 5_1_36/D4] Length = 281 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 11/270 (4%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + + Sbjct: 3 PSLPPSTGPIGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQ 62 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRS-TFPSM----AFLGAV-PAIKQAAAYTQS 120 S + + P L ++ACNTA ++ P + LG + P + T+S Sbjct: 63 AVSKLFELGCP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRS 121 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + IL+T T++ IH + + + S VE + + +K+ I Sbjct: 122 RHVGILATAGTIKSESYLLEIHKLSPDIVVTGEACPMWVSLVENNEYQSEGADYFVKQHI 181 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + D I+L CTHYPL++ RQ +P + + + +AR + L R Sbjct: 182 NRLL--DKDPMIDTIILGCTHYPLLLDKIRQFTPGHIRIIAQGEYVARSLQDYLNRHPEM 239 Query: 241 QTR--VFDDHALFLSGKPDIAMRRLMQGFG 268 R + + G Sbjct: 240 DARCEKGGKCRFLTTESENKFEESASIFLG 269 >gi|329964674|ref|ZP_08301728.1| glutamate racemase [Bacteroides fluxus YIT 12057] gi|328525074|gb|EGF52126.1| glutamate racemase [Bacteroides fluxus YIT 12057] Length = 281 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 10/251 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILSKIRETLPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVTKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P LG + P ++ TQS I +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPRLDPMRRVLGVIRPTVECIGNITQSRHIGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ +H + + + VE + I+K I+ Sbjct: 129 TAGTIKSQSYPLEVHKLFPDIKVSGEACPLWVPLVENNEARGDGTDYFIRKYIDELLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246 + + D ++L CTHYP+++ RQ P + + + +A+ + L R + Sbjct: 187 KDNQIDTVILGCTHYPILLPKIRQYMPSGITTVAQGEFVAKSLKDYLQRHPEMDKKCTKG 246 Query: 247 DHALFLSGKPD 257 ++ + + + Sbjct: 247 GRCVYRTTEAE 257 >gi|315079376|gb|EFT51374.1| glutamate racemase [Propionibacterium acnes HL053PA2] Length = 284 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VE+ E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ D Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESGLLHPHPRD 237 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|282880529|ref|ZP_06289236.1| glutamate racemase [Prevotella timonensis CRIS 5C-B1] gi|281305632|gb|EFA97685.1| glutamate racemase [Prevotella timonensis CRIS 5C-B1] Length = 292 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 102/263 (38%), Gaps = 11/263 (4%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 N + I +FDSG GGL +L +R L+P+Y F+Y+ D+ PYG + + Sbjct: 8 NMAQLSRQPGPIGVFDSGYGGLTILHSIRRLLPQYDFLYLGDNARAPYGTRSFEVVYEFT 67 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYT 118 + + + + L ++ CNTA ++ LG + P + T Sbjct: 68 LQAVTKLFE-MGCHLVILGCNTASAKALRSIQQNDLPHLDAKRRVLGVIRPTAEIIGKLT 126 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 QS + +L+T T++ I + + V+ VE + +KK Sbjct: 127 QSRHVGLLATEGTVKSESYPLEIQKFYPDIQVSGVACPFWVPLVEYNEANSPGADYFVKK 186 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 ++ + D I+L CTHYPL++ + + V + + +AR + L R Sbjct: 187 RMDALMA--KDGAIDTIILGCTHYPLLMAKIEKYNKPGVRIVAQGEYVARSLQDYLYRHP 244 Query: 239 THQTR--VFDDHALFLSGKPDIA 259 + + F + P Sbjct: 245 EMEEKCTKNGTCRYFTTENPARF 267 >gi|86148655|ref|ZP_01066936.1| glutamate racemase [Vibrio sp. MED222] gi|85833574|gb|EAQ51751.1| glutamate racemase [Vibrio sp. MED222] Length = 268 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 138/266 (51%), Gaps = 11/266 (4%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + +Q +ILIFDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ + Sbjct: 3 VSESIQKNILIFDSGVGGLSVYKEISHLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSI 62 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + + + VIACNTA T++ LR+ P + +G VPAIK A+ + + +++ Sbjct: 63 VASFVASHAIDIVVIACNTASTIVLPTLRANNP-IPIVGVVPAIKPASLL-ANKAVGLIA 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TPAT+ R YT LI ++ S + L+ S L E+ G I +E+++ ++ Sbjct: 121 TPATITREYTHELIKNFSSNKRVELLGSTQLVDMAEDKLRGEAINLEELQQILQPMI--- 177 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 DV VL CTH+PLI +Q+ V +D+ +IA+R + LL T Sbjct: 178 --NTIDVAVLGCTHFPLIKSEIQQVLGKNVMLIDSGKAIAKRVQDLLDL--ESSTEEGGV 233 Query: 248 HALFLSGKP--DIAMRRLMQGFGLKS 271 F S P + A+ +++ G S Sbjct: 234 REAFCSALPKKESALNSMLKRLGFSS 259 >gi|167838899|ref|ZP_02465676.1| glutamate racemase [Burkholderia thailandensis MSMB43] Length = 290 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 113/258 (43%), Gaps = 9/258 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL VL+ +R +P +YVAD + PYG +D + +R + + ++ + Sbjct: 17 PIGIFDSGLGGLSVLRAVREQLPGEAIVYVADSLHAPYGPRDDAFIIERTLAIGEWLVAQ 76 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR Sbjct: 77 GAKAL-VVACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRS 134 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 LI Y + C + L +E G E++ + G D Sbjct: 135 ARFEALIARYAADCRFIRQAGHGLVEAIERGDTG----SPELRALLAGYLEPMLEAGADT 190 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHALF 251 +VL CTHYP + R ++ + +D D+IAR+ +L +R L Sbjct: 191 LVLGCTHYPFLDAAIRDVTSNCLHLIDTGDAIARQLARILDERGLRAPASSRPAPLPRLC 250 Query: 252 LSGKPDIAMRRLMQGFGL 269 + GL Sbjct: 251 STSDGRHLQTLAATLLGL 268 >gi|325299201|ref|YP_004259118.1| Glutamate racemase [Bacteroides salanitronis DSM 18170] gi|324318754|gb|ADY36645.1| Glutamate racemase [Bacteroides salanitronis DSM 18170] Length = 275 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL +L K+R L+P+Y+++Y+ D+ PYG + + + + Sbjct: 5 GPIGIFDSGYGGLTILAKIRELLPQYNYLYLGDNARTPYGTRSFEVVYEFTLQAVRKLFG 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 P L ++ACNTA ++ PS LG + P ++ A T + + +L+ Sbjct: 65 LGCP-LVILACNTASAKALRSIQQHDLPHLDPSRRVLGVIRPTVECIGALTHTRHVGLLA 123 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+R IH + + V + +E + ++K + Sbjct: 124 TEGTVRSQSYPLEIHKLYADIRLTGVPCPMWVPLIENNEFNSPGADYFVQKYLGQLLS-- 181 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + D I+L CTHYPL++ R+ +P + ++ +A + L R +TR Sbjct: 182 QDPEIDTIILGCTHYPLLLEKIRRYTPSHIRLVEQGKYVASSLKDYLARHPELRTRCETG 241 Query: 246 DDHALFLSGKPDIAMR 261 + + Sbjct: 242 GTCQFLTTESIEKFQE 257 >gi|262374074|ref|ZP_06067351.1| glutamate racemase [Acinetobacter junii SH205] gi|262311085|gb|EEY92172.1| glutamate racemase [Acinetobacter junii SH205] Length = 290 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 11/261 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL + Q++ +P +Y AD PYG D +++ + L Sbjct: 20 DAPIGVFDSGIGGLSIAQEIASHLPNERILYYADTAHVPYGARSDQEIRELTAKAI-EWL 78 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + ++V+ACNTA D LR + +G VPA+K A TQS ++++L+TPAT Sbjct: 79 YRQGCKIAVVACNTASAFSLDYLREHYGEHFPIVGLVPALKPAVLQTQSKVVAVLATPAT 138 Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 R ++ + + + V+S+ L VE + E+ Sbjct: 139 FRGKLIKEVMLKFAEPAGVKVLTVTSLKLVPFVEAGEQ----MSEACLVELHNILQPVVD 194 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247 + D +VL CTHYP + RQ+ + +D+ ++AR+ +L + ++ + Sbjct: 195 QGADFLVLGCTHYPFLKDAIRQIFNEKLKLIDSGQAVARQTAYILIKNRLLCDKISHNIT 254 Query: 248 -HALFLSGKPDIAMRRLMQGF 267 F+SG+ + ++ ++Q Sbjct: 255 RIECFVSGQNAVELQPVVQHL 275 >gi|20807090|ref|NP_622261.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4] gi|24418565|sp|Q8RC52|MURI2_THETN RecName: Full=Glutamate racemase 2 gi|20515581|gb|AAM23865.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4] Length = 264 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 16/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D+ P I +FDSG+GGL VL+++ ++PE +IY D PYG+ ++ Sbjct: 1 MDSRP--------IGVFDSGVGGLTVLKRLIQVLPEEDYIYFGDTKRVPYGDRSKEEIEL 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + + +K VIACNT I + + F + T++ Sbjct: 53 FAGQIINFMKEK-NVKAVVIACNTTCATID---KGKYDIELFDVLKAGAESGVYCTKNKK 108 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +++T T+ I S Q ++ + +E+ + K + Sbjct: 109 VGVIATKRTVESRSYEINIKSINPQIEVYQKACPEFVPLIEKGLYNSHLA----YKAAKD 164 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 C E +GK D ++L CTHYPL+ + + + V +D + ++ + L R Sbjct: 165 CLEEFKGKEIDTLILGCTHYPLMEPIIKAIMGDGVKVVDPAVRLSHEVKEYLERSRILNF 224 Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFG 268 F+SG + R G Sbjct: 225 GKKGKIEFFVSGDAENFKRAAEMVLG 250 >gi|169831664|ref|YP_001717646.1| glutamate racemase [Candidatus Desulforudis audaxviator MP104C] gi|229486275|sp|B1I4X2|MURI_DESAP RecName: Full=Glutamate racemase gi|169638508|gb|ACA60014.1| glutamate racemase [Candidatus Desulforudis audaxviator MP104C] Length = 273 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 105/264 (39%), Gaps = 12/264 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ++ +FDSG+GGL V++++ ++P IY D PYG+ L + + Sbjct: 2 AKGTVGLFDSGVGGLTVVREVSVILPGKRVIYFGDTAHVPYGDKSVDELLSYAERIIGFL 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + ACNT+ + +R F P +A + +G I +++T AT Sbjct: 62 CSQGA-DYIIFACNTSSAVSLRLMRDRFQVPMIGLIEPGAAEAVRLSATGRIGLIATEAT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + + C + ++ L VE E +++ +E + Sbjct: 121 VKAGAYARAVSALNRNCQVFSQAAPRLVPLVESGESDTPKAEQAVREYLE----PLREQG 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR-CLLPR------INTHQTRV 244 D ++L CTHYP + V ++ V +D + + R AR +L R + Sbjct: 177 IDTLILGCTHYPFLRDVIERVLGPEVVLVDPAAATVRAARLDMLRRGFSADNPGAQGEQD 236 Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268 F+SG D Q G Sbjct: 237 TVSLRYFVSGSADAFRAVAGQFLG 260 >gi|320451387|ref|YP_004203483.1| glutamate racemase [Thermus scotoductus SA-01] gi|320151556|gb|ADW22934.1| glutamate racemase [Thermus scotoductus SA-01] Length = 257 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 17/262 (6%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I +FDSG+GGL VL +R +P+ F+Y D PYG+ +++ + Sbjct: 1 MKDPRRPIGVFDSGVGGLTVLSALRRALPQEDFLYFGDTARVPYGSKPLSMVRRFAWEIA 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +L + V+ACNTA + +L S+ G + + +AA G + ++ T Sbjct: 61 GFLL-RQGVKAIVVACNTASSAALPDLAEDL-SVPVFGVLEPVAKAARGY--GKVGLIGT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ YV + + VEE + +D + + ++E Sbjct: 117 QATVESRAY----ERYVGVS--WARACPLFVPLVEEG-----LWDDPVALLVARHYLEDA 165 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 + + ++L CTHYP + ++ P V +D++++ A L Sbjct: 166 PQDLEALILGCTHYPFLKGTLAKVLP-GVRLIDSAEATAEAVAKALKEEGLLNPEGQGRV 224 Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270 F++G P+ + + L + G++ Sbjct: 225 VHFVTGDPE-SYQNLAERLGVR 245 >gi|15605845|ref|NP_213222.1| glutamate racemase [Aquifex aeolicus VF5] gi|6225737|sp|O66662|MURI_AQUAE RecName: Full=Glutamate racemase gi|2983010|gb|AAC06621.1| glutamate racemase [Aquifex aeolicus VF5] Length = 254 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 15/253 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG GG+ VL+ +R P +Y+ D PYG + + + + DK Sbjct: 3 IGIFDSGAGGMTVLKAIREAYPNVDVVYLGDTARVPYGIRSKETIVRYSKECANFLKDKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +EL+ FP F P +K+A +++ I ++ T AT++ Sbjct: 63 -VDLLVVACNTASAYALEELKREFPFPVFGVIEPGVKEALRKSKTKRIGVIGTQATIKSG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + ++ + + VEE +I KK +E + +GK D + Sbjct: 122 AYQEALKR--AGAEVYSKACPLFVPLVEEGMIEGEIP----KKVVEHYLKDFKGK-VDTL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +L CTHYPL+ + V+ +D+S + A+ + + + L+ + + Sbjct: 175 ILGCTHYPLLKREIQNFL-EGVNVIDSSRATAKSLKDFVKNEGS------GSLELYFTDR 227 Query: 256 PDIAMRRLMQGFG 268 R + G Sbjct: 228 SQNLERLIKLILG 240 >gi|313812338|gb|EFS50052.1| glutamate racemase [Propionibacterium acnes HL025PA1] Length = 284 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VE+ E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ + D Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMAESGLLHSHPRD 237 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|260774782|ref|ZP_05883684.1| glutamate racemase [Vibrio coralliilyticus ATCC BAA-450] gi|260609207|gb|EEX35362.1| glutamate racemase [Vibrio coralliilyticus ATCC BAA-450] Length = 263 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 11/261 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 LQ+ +LIFDSG+GGL V Q++ +P+ ++Y+ D+ +PYG + L R+ L S Sbjct: 3 LQSKVLIFDSGVGGLSVFQEIEKKLPQLDYVYLFDNAAYPYGELDHETLVSRVEALVSQY 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + +Q L VIACNTA T++ LR T S+ +G VPAIK A+ + + +++TPAT Sbjct: 63 VADHQVDLVVIACNTASTIVLPSLR-TLLSIPVVGVVPAIKPASNL-ANKAVGLIATPAT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI + + L+ S L EE G + E+K + + Sbjct: 121 VTRQYTQELIRDFSQSKPVELLGSTRLVDMAEEKLRGTPVSNQELKAVLSPMI-----GK 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV VL CTH+PLI + + V +D+ ++IARR + LL + + + +F Sbjct: 176 VDVAVLGCTHFPLIKEEIQSVLSEQVVLVDSGEAIARRVQELLNLEDKKEGKGL--REIF 233 Query: 252 LSGKP--DIAMRRLMQGFGLK 270 + P + A+ R +Q G Sbjct: 234 STAPPYAEGALNRALQNLGFS 254 >gi|228471912|ref|ZP_04056682.1| glutamate racemase [Capnocytophaga gingivalis ATCC 33624] gi|228276764|gb|EEK15470.1| glutamate racemase [Capnocytophaga gingivalis ATCC 33624] Length = 260 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 9/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I +FDSG+GG + +++ +P +Y+AD + PYG + + Sbjct: 1 MISPIGLFDSGVGGTTIWREVVRQLPWESTLYLADSLNAPYGEKSSEEIIALCEKNTEYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 LD + L ++ACNTA T LR+ + + F+G PAIK A Y+Q+ I +L+T +T Sbjct: 61 LDHHS-KLIIVACNTATTNAITHLRAKYK-VPFIGIEPAIKPAGLYSQTKTIGVLATQST 118 Query: 132 LRRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 L+ + +N ++ + L +EE KI E+ +E + Sbjct: 119 LKSAFFANTCQQLLDKGINVLKQEGIGLVPLIEEG----KIDTPEMMALLEQYLRPMVAE 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDH 248 D +VL CTHYP + + ++ P V +D++ ++A++ +L + N + H Sbjct: 175 GMDYLVLGCTHYPYLTSLISEILPENVRIMDSAQAVAKQTERILSQNNLLAKKEEHVPSH 234 Query: 249 ALFLSGKPDIAMRRLMQG 266 + +I +G Sbjct: 235 LWLTNKNAEILQSFAPEG 252 >gi|270290961|ref|ZP_06197184.1| glutamate racemase [Pediococcus acidilactici 7_4] gi|270280357|gb|EFA26192.1| glutamate racemase [Pediococcus acidilactici 7_4] Length = 265 Score = 274 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 17/267 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++ + LMP +++ D+ PYG + K Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKAAKELMPNEAVVFIGDEARVPYGPRPTAEVIK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + ++ K VIACNTA L +T P + +G + P + A A T++ Sbjct: 53 FSQQMADFLVKK-DVKALVIACNTATNAAFQILSTTLP-IPVIGVIQPGAQAAVATTRNN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T T++ S + + Q + V+ E ++ E + I+ Sbjct: 111 RIGVIATEGTIKSQAYSTALAALAPQTEVFPVACQSFVELAEHN----QLTTPEALQVID 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + + D +VL CTH+PL+ + V +D + ++ + +L R + Sbjct: 167 QQLVGLKNQGIDTLVLGCTHFPLLAKGIQTAVGDRVKLVDPGVAAVQQLKDVLERQGLLR 226 Query: 242 TRVF-DDHALFLSGKPDIAMRRLMQGF 267 D F + + R + Q F Sbjct: 227 EATSTPDEQYFATANI-ASFRTIAQSF 252 >gi|269128064|ref|YP_003301434.1| glutamate racemase [Thermomonospora curvata DSM 43183] gi|268313022|gb|ACY99396.1| glutamate racemase [Thermomonospora curvata DSM 43183] Length = 270 Score = 274 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 99/258 (38%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG GGL V + + +P+ +Y+ D PYG ++ + + ++ Sbjct: 3 DAPIGIFDSGYGGLTVARAILDQLPDEPILYLGDSARQPYGPRPIAEVRAFALQMLDQLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACN+A + + R + PA ++AA T +G + +++T AT+ Sbjct: 63 AEG-VKMLVIACNSASAAMLRDARERYDVPIVEVIKPATRRAARATTNGRVGLIATHATV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + V+ VE E+ Sbjct: 122 TSRAYEDAFAA-APHIELTSVACPRFVEFVEAGITKGP----ELLSVARSYLQPIVDAGC 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHAL 250 D ++L CTHYPL++ + V + +++ A+ +L +T H Sbjct: 177 DTLILGCTHYPLLIGAISYVVGDGVTLVSSAEETAKDVYRVLQDQGLARAETASPPVHRF 236 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++G P R + G Sbjct: 237 LVTGDPAEFARLGRRFLG 254 >gi|284029805|ref|YP_003379736.1| glutamate racemase [Kribbella flavida DSM 17836] gi|283809098|gb|ADB30937.1| glutamate racemase [Kribbella flavida DSM 17836] Length = 290 Score = 274 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 95/259 (36%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I IFDSG GGL V + + +P +Y+ D PYG +++ + + Sbjct: 25 ADAPIGIFDSGFGGLTVARAVLDQLPHEPILYLGDTARQPYGPKSIAEVREYALECLDHL 84 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ L VIACN+A + + R + +PA ++A A T++ + ++ T +T Sbjct: 85 VEAGVKAL-VIACNSASAAMLRDARERYDVPVVEVILPAARRAVAATRNQRVGVICTRST 143 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + Q + + VE E+ Sbjct: 144 AASLAYDDAFAA-APQVELTTQACPKFVDFVESGVTSGP----ELLAAAHEYLDPLVEAG 198 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFDDHA 249 D ++L CTHYPL+ V + V + +++ A+ +L + T H Sbjct: 199 VDTLILGCTHYPLLTGVISYVMGDEVTLVSSAEEGAKDVYGVLTKAGLLRDNTLPEPRHR 258 Query: 250 LFLSGKPDIAMRRLMQGFG 268 +G P + G Sbjct: 259 FVTTGDPADFAAIGSRFLG 277 >gi|282855013|ref|ZP_06264345.1| glutamate racemase [Propionibacterium acnes J139] gi|282581601|gb|EFB86986.1| glutamate racemase [Propionibacterium acnes J139] gi|314982112|gb|EFT26205.1| glutamate racemase [Propionibacterium acnes HL110PA3] gi|315090351|gb|EFT62327.1| glutamate racemase [Propionibacterium acnes HL110PA4] Length = 284 Score = 274 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTMADVRRYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VEE E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ + + Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 237 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|169634511|ref|YP_001708247.1| glutamate racemase [Acinetobacter baumannii SDF] gi|239500887|ref|ZP_04660197.1| glutamate racemase [Acinetobacter baumannii AB900] gi|169153303|emb|CAP02411.1| glutamate racemase [Acinetobacter baumannii] gi|193076216|gb|ABO10839.2| glutamate racemase [Acinetobacter baumannii ATCC 17978] Length = 288 Score = 274 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 12/266 (4%) Query: 7 PCEKKL-QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K L I IFDSGIGG+ V ++ +P +Y AD PYG D +++ Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124 D L + ++V+ACNTA D LR + +G VPA+K A T+S +++ Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+TPAT R +++ + + + ++S+ L VE + + +++ ++ Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ- 190 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYP + L +D+ ++AR+ +L + Sbjct: 191 ---PAVEQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCD 247 Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265 ++ + A ++SG A++ ++Q Sbjct: 248 QIRQNVARIECYVSGNNADALQPVLQ 273 >gi|258647676|ref|ZP_05735145.1| glutamate racemase [Prevotella tannerae ATCC 51259] gi|260852505|gb|EEX72374.1| glutamate racemase [Prevotella tannerae ATCC 51259] Length = 285 Score = 274 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 110/265 (41%), Gaps = 13/265 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + P I +FDSG GG+ +L++ + L+P+Y ++Y+ D+ PYG+ + + Sbjct: 1 MSAQPIPAT--APIGVFDSGYGGMTILRQFKRLLPQYDYLYLGDNARAPYGSHSFEVIYQ 58 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS-----TFPSMAFLGAV-PAIKQAAA 116 + + + P L ++ACNTA L+ +P LG + P ++ A Sbjct: 59 YTLEAVEALFKRGCP-LVILACNTASAKALRTLQQNDLPARYPDRRVLGVIRPTVETVAG 117 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 TQS I +L T T+ + + ++ + VE Y + + Sbjct: 118 LTQSHHIGLLGTVGTISSGSYTMEFAKIDPSAKLTGMACPMWVPLVENYEFDSPGADYFV 177 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 +K ++ F + D ++L CTHYPL++ Q +P V ++ +A + + L R Sbjct: 178 RKRLDALFES--DPQIDTLILGCTHYPLLLEKISQFTPPNVKIVEQGAYVAEKLQDYLQR 235 Query: 237 INTHQTRVF--DDHALFLSGKPDIA 259 + R+ + D Sbjct: 236 HPEMEVRLSRQGRSKYLTTESVDKF 260 >gi|148543776|ref|YP_001271146.1| glutamate racemase [Lactobacillus reuteri DSM 20016] gi|184153182|ref|YP_001841523.1| glutamate racemase [Lactobacillus reuteri JCM 1112] gi|227363244|ref|ZP_03847376.1| glutamate racemase [Lactobacillus reuteri MM2-3] gi|325682148|ref|ZP_08161666.1| glutamate racemase [Lactobacillus reuteri MM4-1A] gi|167017317|sp|A5VIY5|MURI_LACRD RecName: Full=Glutamate racemase gi|229486242|sp|B2G6G1|MURI_LACRJ RecName: Full=Glutamate racemase gi|148530810|gb|ABQ82809.1| glutamate racemase [Lactobacillus reuteri DSM 20016] gi|183224526|dbj|BAG25043.1| glutamate racemase [Lactobacillus reuteri JCM 1112] gi|227071700|gb|EEI09991.1| glutamate racemase [Lactobacillus reuteri MM2-3] gi|324978792|gb|EGC15741.1| glutamate racemase [Lactobacillus reuteri MM4-1A] Length = 267 Score = 274 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 6/255 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V++ +R +P+ I+V D FPYG +++ + + +L Sbjct: 3 KRPIGVMDSGLGGLSVIRVLREQLPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + +IACNTA L++ P + +G + AA I ++ T +T+ Sbjct: 63 EQ-DVKMMIIACNTATAAALRLLQNELP-IPVIGVIKPGAMAATQHHYKKIGVIGTESTI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + + L S VE G E +K ++ + + Sbjct: 121 KNGAYAKTLAKLNPDLSVISSPAQPLVSIVEHGQTGT----SEAQKAVDTELEVFDNQSI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 + ++L CTH+P + V +D + R+A+ LL N + L+ Sbjct: 177 EALILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTGKNQLSDNLASSINLYS 236 Query: 253 SGKPDIAMRRLMQGF 267 +G + Q Sbjct: 237 TGDAKDLVAGAQQWL 251 >gi|189462010|ref|ZP_03010795.1| hypothetical protein BACCOP_02682 [Bacteroides coprocola DSM 17136] gi|189431224|gb|EDV00209.1| hypothetical protein BACCOP_02682 [Bacteroides coprocola DSM 17136] Length = 276 Score = 274 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 11/259 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R L+P+Y +IY+ D+ PYG + + + + D Sbjct: 6 GPIGVFDSGYGGLTILDKIRELLPQYDYIYLGDNARTPYGTRSFEVVYEFTLQAVRKLFD 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-FPSM----AFLGAV-PAIKQAAAYTQSGLISILS 127 P L ++ACNTA ++ P + LG + P + T S + +L+ Sbjct: 66 LGCP-LVILACNTASAKALRSIQENDLPHIDATRRVLGVIRPTAECIGDITVSRHVGLLA 124 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ +H + V+ + VE + +++ I + Sbjct: 125 TAGTVKSQSYPIELHKLFPDIQLTGVACPLWVPLVENNEFNSPGADYFVQEYINQLL--E 182 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D I+L CTHYPL++ RQ +P + + + +A + L R + +TR Sbjct: 183 QDPKIDTIILGCTHYPLLIEKIRQFTPPHIRLVAQGEYVAASLKDYLRRHSEIRTRCTAG 242 Query: 246 DDHALFLSGKPDIAMRRLM 264 + + Sbjct: 243 GTCEFLTTESVEKFQEAAS 261 >gi|88801356|ref|ZP_01116884.1| glutamate racemase [Polaribacter irgensii 23-P] gi|88782014|gb|EAR13191.1| glutamate racemase [Polaribacter irgensii 23-P] Length = 266 Score = 274 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 8/253 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I FDSGIGG V +++ L+P + IY++D PYG + +L Sbjct: 5 NSPIGFFDSGIGGTSVWKEVIKLLPNENTIYLSDSENAPYGEKSADEIILLSRKNTDFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K L ++ACNTA T LR + ++ F+G PAIK A+ T++ I +L+T TL Sbjct: 65 -KENCKLIIVACNTATTNAITFLRDAY-AIPFIGIEPAIKPASLITKTNKIGVLATQGTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I + L + +E ++ +E + + Sbjct: 123 NSALFEKTSLPIRNTIQIQETNGKGLVTLIENG----QLNSEETRALLTVYLAPMLANNI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHAL 250 D +VL CTHYP ++ R++ V +D+ +++A++ + +L + + + +H L Sbjct: 179 DSLVLGCTHYPYLIPQIREIIGPDVQIIDSGEAVAKQTKAILLKHKILNSDQKHTANHKL 238 Query: 251 FLSGKPDIAMRRL 263 +++ + + Sbjct: 239 YINKDKKALEKLI 251 >gi|323174290|gb|EFZ59916.1| glutamate racemase [Escherichia coli LT-68] Length = 262 Score = 274 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 138/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GG+ V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGVSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G + D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + ++Q +G ++ Sbjct: 239 GAEQLLPVLQRYGFET 254 >gi|301156626|emb|CBW16097.1| glutamate racemase [Haemophilus parainfluenzae T3T1] Length = 263 Score = 274 bits (703), Expect = 8e-72, Method: Composition-based stats. Identities = 79/259 (30%), Positives = 134/259 (51%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + ++L FDSG+GGL V ++ + LMP+ H++Y D+ GFPY + + +R + + I Sbjct: 3 KPTVLFFDSGMGGLSVYREAKKLMPDNHYLYCFDNAGFPYSEKSEETIIQRTLDICKKIN 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y VIACNTA T++ LR F S+ +G VPAIK AA +Q+ I +L+T T+ Sbjct: 63 QNYPLDAIVIACNTASTVVLPPLREQF-SIPIVGTVPAIKPAAEISQTKHIGLLATKGTV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R Y ++LIH + S C + + S L E G + +K E+ + Sbjct: 122 KRPYVNDLIHQFASHCIVERLGSTKLVEIAEHKIQGKSVDLIALKNELSPW---ASIENL 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I L CTH+PLI + P +++D +IA+R + LL ++ Q++ + +F Sbjct: 179 DTICLGCTHFPLIKDEIQICLPQVKNFMDPGFAIAKRLQFLLDKLEV-QSKSEVKNQVFC 237 Query: 253 SGKPDI--AMRRLMQGFGL 269 + + + + + +G Sbjct: 238 TQDVENKHQLEQALALWGF 256 >gi|319900213|ref|YP_004159941.1| glutamate racemase [Bacteroides helcogenes P 36-108] gi|319415244|gb|ADV42355.1| glutamate racemase [Bacteroides helcogenes P 36-108] Length = 281 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 107/261 (40%), Gaps = 10/261 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P LG + P +++ T++ + +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPHLDPMRRVLGVIRPTVERIGDITKNRHVGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ IH + + + VE + I+K I Sbjct: 129 TAGTIKSGSYPLEIHKLFPDIRVSGEACPMWVYLVENNEAQGDGTDYFIRKYINSLLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246 + ++ D ++L CTHYPL++ R+ P + + + +A + L R + Sbjct: 187 KDRQVDTVILGCTHYPLLLPKIRRYMPEGITTVTQGELVAESLKDYLRRHPEMDKKCTKG 246 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 ++ + + + F Sbjct: 247 GRCVYRTTEAEEKFTESASTF 267 >gi|260549201|ref|ZP_05823422.1| glutamate racemase [Acinetobacter sp. RUH2624] gi|260407929|gb|EEX01401.1| glutamate racemase [Acinetobacter sp. RUH2624] Length = 288 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 123/263 (46%), Gaps = 11/263 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSGIGG+ V ++ +P H +Y AD PYG D +++ Sbjct: 16 KASADAPIGIFDSGIGGMSVAAEIARYLPNEHIVYYADTAYVPYGPRSDEEIRELTARAV 75 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILS 127 D L + ++V+ACNTA D LR + +G VPA+K A T+S ++++L+ Sbjct: 76 -DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLA 134 Query: 128 TPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 TPAT R +++ + + + ++++ L VE + + +K+ ++ Sbjct: 135 TPATFRGQLIKDVVEKFAVPAGVKVMTLTNLELVPCVEAGQQMSPVCLNALKEVLQ---- 190 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 + D +VL CTHYP + L +D+ ++AR+ +L + ++ Sbjct: 191 PAADQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIR 250 Query: 246 DDHA---LFLSGKPDIAMRRLMQ 265 + A ++SG A++ ++Q Sbjct: 251 QNVARIECYVSGNNAEALQPVLQ 273 >gi|212695391|ref|ZP_03303519.1| hypothetical protein BACDOR_04940 [Bacteroides dorei DSM 17855] gi|237711572|ref|ZP_04542053.1| glutamate racemase [Bacteroides sp. 9_1_42FAA] gi|265753000|ref|ZP_06088569.1| glutamate racemase [Bacteroides sp. 3_1_33FAA] gi|212662026|gb|EEB22600.1| hypothetical protein BACDOR_04940 [Bacteroides dorei DSM 17855] gi|229454267|gb|EEO59988.1| glutamate racemase [Bacteroides sp. 9_1_42FAA] gi|263236186|gb|EEZ21681.1| glutamate racemase [Bacteroides sp. 3_1_33FAA] Length = 281 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 11/270 (4%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + + Sbjct: 3 PSLPPSTGPIGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQ 62 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRS-TFPSM----AFLGAV-PAIKQAAAYTQS 120 S + + P L ++ACNTA ++ P + LG + P + T+S Sbjct: 63 AVSKLFELGCP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRS 121 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + IL+T T++ IH + + + S VE + + +K+ I Sbjct: 122 RHVGILATAGTIKSESYLLEIHKLSPDIVVTGEACPMWVSLVENNEYQSEGADYFVKQHI 181 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + D I+L CTHYPL++ RQ +P + + + +AR + L R Sbjct: 182 NRLL--DKDPVIDTIILGCTHYPLLLDKIRQFTPGHIRIIAQGEYVARSLQDYLNRHPEM 239 Query: 241 QTR--VFDDHALFLSGKPDIAMRRLMQGFG 268 R + + G Sbjct: 240 DARCEKGGKCRFLTTESENKFEESASIFLG 269 >gi|50843138|ref|YP_056365.1| glutamate racemase [Propionibacterium acnes KPA171202] gi|50840740|gb|AAT83407.1| glutamate racemase [Propionibacterium acnes KPA171202] Length = 297 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 17 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 76 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 77 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 135 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VEE E++ Sbjct: 136 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 190 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ + + Sbjct: 191 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 250 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 251 SSRYFLTTGNAERFEKLGRRLMEGF 275 >gi|228938111|ref|ZP_04100731.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970986|ref|ZP_04131623.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977589|ref|ZP_04137981.1| Glutamate racemase [Bacillus thuringiensis Bt407] gi|228782233|gb|EEM30419.1| Glutamate racemase [Bacillus thuringiensis Bt407] gi|228788795|gb|EEM36737.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821596|gb|EEM67601.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938613|gb|AEA14509.1| glutamate racemase [Bacillus thuringiensis serovar chinensis CT-43] Length = 276 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE I + ++++ + + Sbjct: 125 IKSNMYEKALHELDTYLEVHSHACPTLATVVENRLEDI----AYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVLSFEHIAERWLGYQ 259 >gi|167588983|ref|ZP_02381371.1| glutamate racemase [Burkholderia ubonensis Bu] Length = 285 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 69/251 (27%), Positives = 107/251 (42%), Gaps = 6/251 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + + L Sbjct: 15 APVGVFDSGLGGLSVLRAVRAQLPGESFVYVADSRNAPYGPRDEAFITERTLAI-GEWLA 73 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA +R ++ +G P IK AAA + SG+ +L+T +TL Sbjct: 74 REGAKALVVACNTATAQSIAAIRERL-AIPLVGVEPGIKPAAALSASGIAGVLATQSTLA 132 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L+ Y + C L VE ++ ++G D Sbjct: 133 SARFQALLDRYGAGCRFICQPGHGLVEAVERGDTN----SPALRALLDGYLQPMLDAGAD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP R L + +D SD+IAR+ +L F S Sbjct: 189 TLVLGCTHYPFFTETIRDLFGDRLTIVDTSDAIARQLARVLDERGLRAPAGTRAPPRFCS 248 Query: 254 GKPDIAMRRLM 264 +R L Sbjct: 249 TSDGRQLRALA 259 >gi|149278811|ref|ZP_01884946.1| glutamate racemase [Pedobacter sp. BAL39] gi|149230430|gb|EDM35814.1| glutamate racemase [Pedobacter sp. BAL39] Length = 276 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 11/266 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + SI IFDSG GGL V + + +P+Y++IY+ D+ PYG+ + + + Sbjct: 2 NISQSIGIFDSGFGGLTVFKSIAQKLPQYNYIYLGDNSRAPYGDRSFETVYRYTLECVEW 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRS-----TFPSMAFLGAV-PAIKQAAAYTQSGLIS 124 + + P L ++ACNTA ++ +P LG + P + Y+ S I Sbjct: 62 LFGQGCP-LVILACNTASAKALRSIQQKVLPFKYPDRRVLGVIRPTAEVVGNYSNSRTIG 120 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 ++ T T++ + + + + S + +E + + +KK + Sbjct: 121 VMGTRGTVKSESYLIEVAKFFPEIKVLQQSCPLWVPLIENNEHIHEGADYFLKKYLGQLL 180 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + + D I+LACTHYPL++ R L P V L + +A L R + R+ Sbjct: 181 AKDDA--IDCILLACTHYPLLIPKLRALLPEKVALLGQGEIVADSLVDYLERHPEMKDRL 238 Query: 245 FDDH--ALFLSGKPDIAMRRLMQGFG 268 D F SG + ++ FG Sbjct: 239 ARDREMRFFTSGDTSVFDQQASIFFG 264 >gi|325577829|ref|ZP_08148104.1| glutamate racemase [Haemophilus parainfluenzae ATCC 33392] gi|325160574|gb|EGC72700.1| glutamate racemase [Haemophilus parainfluenzae ATCC 33392] Length = 263 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 135/259 (52%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++++L FDSG+GGL V ++ + LMP+ H++Y D+ GFPY + + +R + + I Sbjct: 3 KSTVLFFDSGMGGLSVYREAKKLMPDNHYLYCFDNAGFPYSEKSEETIIQRTLDICKKIN 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Y VIACNTA T++ LR F S+ +G VPAIK AA +Q+ I +L+T T+ Sbjct: 63 QDYPLDAIVIACNTASTVVLPPLREQF-SIPIVGTVPAIKPAAEISQTKHIGLLATKGTV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R Y ++LIH + S C + + S L E G + +K E+ + Sbjct: 122 KRPYVNDLIHQFASHCVVERLGSTKLVEIAEHKIQGKSVDLIALKNELTPW---ASIENL 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I L CTH+PLI + P +++D +IA+R + LL ++ +++ + +F Sbjct: 179 DTICLGCTHFPLIKDEIQICLPQVKNFMDPGFAIAKRLQFLLDKLEV-RSKSEMKNQVFC 237 Query: 253 SGKPD--IAMRRLMQGFGL 269 + + + + + +G Sbjct: 238 TQDVENKYQLEQALALWGF 256 >gi|254497879|ref|ZP_05110644.1| glutamate racemase [Legionella drancourtii LLAP12] gi|254352877|gb|EET11647.1| glutamate racemase [Legionella drancourtii LLAP12] Length = 270 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 10/251 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q ++ +FDSG+GGL VL+ ++ +P FIY+ D PYG +K+ M + ++ Sbjct: 5 QLAVGVFDSGMGGLTVLRALKESLPHESFIYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPAT 131 +++ VIACNTA T L+S P M LG +P A A T++ +++L+T T Sbjct: 65 ERH-IKALVIACNTATTAALPYLQSMLPDMPILGVVIPGASAAVAATKNQRVAVLATETT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + LI + Q I + +L + EE +I + +K ++G E Sbjct: 124 IASKAYQELIARQLPQAVISTRACSVLVALAEEGMINNQIAREALKHYLDGFNDE----- 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HA 249 D +L CTH+P+ + L P + +D++ + A LL + N ++ + Sbjct: 179 -DTFLLGCTHFPVFKSLLVDLLPEGIAVVDSAHATANSLYSLLQKQNLLNDKMLGNGSVN 237 Query: 250 LFLSGKPDIAM 260 ++ Sbjct: 238 YLVTDSIKRFQ 248 >gi|227875772|ref|ZP_03993900.1| glutamate racemase [Mobiluncus mulieris ATCC 35243] gi|269977417|ref|ZP_06184389.1| glutamate racemase [Mobiluncus mulieris 28-1] gi|306819045|ref|ZP_07452762.1| glutamate racemase [Mobiluncus mulieris ATCC 35239] gi|307700282|ref|ZP_07637322.1| glutamate racemase [Mobiluncus mulieris FB024-16] gi|227843714|gb|EEJ53895.1| glutamate racemase [Mobiluncus mulieris ATCC 35243] gi|269934333|gb|EEZ90895.1| glutamate racemase [Mobiluncus mulieris 28-1] gi|304648238|gb|EFM45546.1| glutamate racemase [Mobiluncus mulieris ATCC 35239] gi|307614493|gb|EFN93722.1| glutamate racemase [Mobiluncus mulieris FB024-16] Length = 293 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 111/288 (38%), Gaps = 38/288 (13%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P +Y+ D PYG +K + + ++ Sbjct: 3 NAPIGIFDSGLGGLTVARAIIDQLPGESVVYIGDTANSPYGTKPVETVKHLALNVMDKLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 + + + VIACNTA + + R+ + + L + PA+ +A + T +G I +++T Sbjct: 63 E-HGVKILVIACNTASAAVLFDARARYDRLGIPVLEVISPAVHRAVSATHNGKIGVIATS 121 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ + +Y Q + + VE E+ + + Sbjct: 122 TTIATGTYQRALGAY-QQVEVTAQACPAFVEFVERGITSG----SELLAKAREYLEPVKA 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR------------ 236 D +VL CTHYPL+ V + V + +S+ AR R LL Sbjct: 177 GGVDTLVLGCTHYPLLTGVINYVMGSEVTLVSSSEETARDVYRTLLENDWLNEDDATGEI 236 Query: 237 ----INTHQT------------RVFDDHALFLSGKPDIAMRRLMQGFG 268 +N ++ + + + +G ++ R + G Sbjct: 237 NFSALNGGESGAVVESDSPVALKQSNRYQFLATGNTEVFTRLARRFLG 284 >gi|121605775|ref|YP_983104.1| glutamate racemase [Polaromonas naphthalenivorans CJ2] gi|120594744|gb|ABM38183.1| glutamate racemase [Polaromonas naphthalenivorans CJ2] Length = 272 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 13/269 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I +FDSGIGGL VL+ +R MP HFIY+AD PYG + + R + + Sbjct: 1 MDRAIGVFDSGIGGLSVLKALRAAMPHEHFIYIADSGHAPYGERDVAHVLARSRAIVQYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ L V+ACNTA LR+ P +A +G PA+K AA TQ+G I +++T +T Sbjct: 61 VNQNVKAL-VMACNTATAAAIHLLRTEHPGLALIGVEPALKPAAGRTQTGRIGVMATRST 119 Query: 132 LRRTYTSNLIHSYVSQ---CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 L L+ + + LA +E A + +I Sbjct: 120 LASAKFQALLAAQSGGPQKVEFIVQPCDGLAHAIEASADTGDATRTI---ALCAHYISAM 176 Query: 189 GK------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 G+ + D +VL CTHYP R L V ++DN +++AR+ LLP Sbjct: 177 GRFGTETGQIDTLVLGCTHYPFASEHLRALVGAQVQFIDNGEAVARQTLRLLPASVMAAN 236 Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 +LF +G+PD + GL + Sbjct: 237 APPGRVSLFTTGQPDTLQAAAQRWLGLSA 265 >gi|209696283|ref|YP_002264214.1| glutamate racemase [Aliivibrio salmonicida LFI1238] gi|226707584|sp|B6ENT1|MURI_ALISL RecName: Full=Glutamate racemase gi|208010237|emb|CAQ80568.1| glutamate racemase [Aliivibrio salmonicida LFI1238] Length = 265 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 85/260 (32%), Positives = 140/260 (53%), Gaps = 9/260 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +ILIFDSGIGGL V + +R+ +P +IY D+ GFPYG + L +R ++ + Sbjct: 1 MPKNILIFDSGIGGLSVFKDIRYQIPLAKYIYAFDNAGFPYGELTEDILIERTSYIIQKL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ + VIACNTA T++ LR T S+ +G VPAIK AA +Q I +L+TPAT Sbjct: 61 CHRHKIDIVVIACNTASTVVLPTLR-TLLSIPVVGVVPAIKPAALVSQ--KIGLLATPAT 117 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R+YT +LI S+ S + L+ S L EE GI + E+ + ++ + Sbjct: 118 IKRSYTFDLIKSFASISDVKLLGSTRLVEMAEEKMVGIPVNLIELDEILKSW-----KGQ 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D IVL CTH+P + +++ V +D+ ++IARR + LL ++ ++ Sbjct: 173 VDCIVLGCTHFPFLRKEIKEILGRNVLLIDSGEAIARRVKQLLGSVDANKGDHLFGEVYC 232 Query: 252 -LSGKPDIAMRRLMQGFGLK 270 S K + A+ + + Sbjct: 233 SASTKNEEALNKTFKELDFN 252 >gi|282877118|ref|ZP_06285960.1| glutamate racemase [Prevotella buccalis ATCC 35310] gi|281300800|gb|EFA93127.1| glutamate racemase [Prevotella buccalis ATCC 35310] Length = 279 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 11/251 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG + + + + Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGTRSFDVVYEFTRQAVVKLFE 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-FPSM----AFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ CNTA ++ PS+ LG + P + + T+S + +L+ Sbjct: 69 -MGCHLVILGCNTASAKALRTIQQHDLPSLDSNRRVLGVIRPTAEVIGSLTKSRHVGLLA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ I + + ++ VE + +KK ++ + + Sbjct: 128 TEGTVKSESYQLEIQKFFPDIQVSGIACPFWVPLVEYNEADSPGADYFVKKRLDA--LAQ 185 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + D I+L CTHYPL++ + V + + +A + L R + Sbjct: 186 KDPLIDTIILGCTHYPLLMPKIEKYKRPGVRIVAQGEYVANSLKDYLKRHPEMNEKCTKT 245 Query: 246 DDHALFLSGKP 256 F + P Sbjct: 246 GSCQYFTTENP 256 >gi|254470122|ref|ZP_05083526.1| glutamate racemase [Pseudovibrio sp. JE062] gi|211960433|gb|EEA95629.1| glutamate racemase [Pseudovibrio sp. JE062] Length = 257 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 97/247 (39%), Positives = 149/247 (60%), Gaps = 4/247 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E + +L+ DSG+GGL V ++++ +P+ +Y+AD FPYG+WE AL+ + L Sbjct: 15 MEPDVSGRVLVLDSGVGGLSVQREIKRALPDAGLLYLADRAAFPYGDWEADALRDHIASL 74 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + D +QP V+ACNTA TL+ LR F + +G VPAIK AA T+SG+ ++L+ Sbjct: 75 VNSVSDVWQPSAVVVACNTASTLVLQRLRE-FLDVPVVGTVPAIKPAAQKTKSGVFAVLA 133 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP T++R YT +LI + + HI LV + LA+ E+ + D ++ EI CF+EK Sbjct: 134 TPGTVKRDYTQDLIIDFAPEHHIALVGATGLAALAEDKLASRAVDLDRLRHEIAPCFVEK 193 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 G+RTD +VL CTHYP + Q++PWPV W+D + +IARR +L R + V + Sbjct: 194 SGERTDCVVLGCTHYPFLQEEMEQVAPWPVTWIDPAPAIARRLTDVLERDHV---AVGCE 250 Query: 248 HALFLSG 254 F++G Sbjct: 251 DLFFVTG 257 >gi|51244544|ref|YP_064428.1| glutamate racemase [Desulfotalea psychrophila LSv54] gi|50875581|emb|CAG35421.1| probable glutamate racemase [Desulfotalea psychrophila LSv54] Length = 295 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I IFDSG+GGL V K++ L+P IY AD PYG ++ R + + Sbjct: 20 KAKKPIGIFDSGVGGLSVALKIKELLPREDLIYFADTGFSPYGTKPAELIRSRAKHITAF 79 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ K V+ACNTA LR+T ++ +G P I+ A ++SG+I +L+T Sbjct: 80 LIKKG-CKAIVVACNTATANAIAYLRAT-SNIPIIGVEPGIRPAVQQSKSGIIGVLATRQ 137 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL+ + L + + I + + L VE + +E + IEG Sbjct: 138 TLKSSSFQTLKKRFAGKSQIEIQACPRLVELVEAG----NLTGNETTEAIEGYVEPLLRA 193 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA 249 D IVL CTHY + +++ +D S + + + L + T+ Sbjct: 194 GADYIVLGCTHYLFLAPSIKKIISGRAQLIDTSVPVTQELKKQLAISSLLSPTKRDGRTE 253 Query: 250 LFLSGKPDIAMRRLMQGFG 268 + SG ++ Q +G Sbjct: 254 FWTSGNQTEVTAQISQLWG 272 >gi|229074552|ref|ZP_04207581.1| Glutamate racemase [Bacillus cereus Rock4-18] gi|228708672|gb|EEL60816.1| Glutamate racemase [Bacillus cereus Rock4-18] Length = 275 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVKEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ VE + ++++ + + Sbjct: 125 IQSNMYEKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + G + Sbjct: 241 TTGSVLSFEHIAERWLGYE 259 >gi|157377467|ref|YP_001476067.1| glutamate racemase [Shewanella sediminis HAW-EB3] gi|157319841|gb|ABV38939.1| Glutamate racemase [Shewanella sediminis HAW-EB3] Length = 282 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 84/273 (30%), Positives = 131/273 (47%), Gaps = 17/273 (6%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + L IL+FDSGIGGL + ++R ++P+ + Y+ D+ PYG ++ L L + Sbjct: 7 RDLSGPILVFDSGIGGLSIFDEIRQVLPDKQYCYLFDNARLPYGELDEQVLISGCKALIT 66 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 I+ L VIACNTA TL+ LR ++ +G VPAIK AAA +++ I +L+TP Sbjct: 67 SIVKMIDASLIVIACNTASTLVLPALREVL-NIPVVGVVPAIKPAAALSRNKHIGVLATP 125 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+RR YT LI + C + L S L E A GI I I+ +I + Sbjct: 126 GTIRRPYTHELIEQFGGDCKVELYGSSELVILSERKAAGIDI----IQADIAKILNPIKC 181 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRINTHQTRVFD 246 D +VL CTH+P++ + V LD++ ++A R L L N ++ D Sbjct: 182 SGLDTLVLGCTHFPMLKVEIQDYLGENVLLLDSAKAVAARVISLCLQLDEKNRNRNNSKD 241 Query: 247 DH---------ALFLSGKPDIAMRRLMQGFGLK 270 + AL+ S + ++ + G Sbjct: 242 EVSGSESKEMIALYTSEEISDGLKNTLAKIGFS 274 >gi|20807679|ref|NP_622850.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4] gi|24418564|sp|Q8RAJ0|MURI3_THETN RecName: Full=Glutamate racemase 3 gi|20516226|gb|AAM24454.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4] Length = 271 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 10/251 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG+GGL VL+++ ++P+ +++Y D PYG+ +K + + L K Sbjct: 10 PIGVFDSGVGGLTVLKRLMEVLPQENYVYFGDTRRVPYGDRSKEEIKAFTKQIMN-FLKK 68 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNT + + E + + F +K A T + I ++ T T Sbjct: 69 KNVKIFVIACNTISAVFEKEGKE----IVFNVVEAGVKSAVETTCNKRIGVIGTRRTTEE 124 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 SN I ++ V+ L +E+ K + +K+ + C + ++ D Sbjct: 125 RIYSNKIKEINKSIEVYEVACPELVPLIEKGF----YKTESVKRVVIECVKNLKEEKIDT 180 Query: 195 IVLACTHYPLIVHVFRQLS-PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP+++ + V +D ++ +A + + R+N +LS Sbjct: 181 LVLGCTHYPIVIDYIEEALIGENVRIVDPAERLAYDVKEYITRVNMINPNGSGQVQFYLS 240 Query: 254 GKPDIAMRRLM 264 + Sbjct: 241 KMTQSFIEIAK 251 >gi|28899710|ref|NP_799315.1| glutamate racemase [Vibrio parahaemolyticus RIMD 2210633] gi|260361662|ref|ZP_05774689.1| glutamate racemase [Vibrio parahaemolyticus K5030] gi|260879377|ref|ZP_05891732.1| glutamate racemase [Vibrio parahaemolyticus AN-5034] gi|260897204|ref|ZP_05905700.1| glutamate racemase [Vibrio parahaemolyticus Peru-466] gi|260901359|ref|ZP_05909754.1| glutamate racemase [Vibrio parahaemolyticus AQ4037] gi|33301374|sp|Q87KP1|MURI_VIBPA RecName: Full=Glutamate racemase gi|28807962|dbj|BAC61199.1| glutamate racemase [Vibrio parahaemolyticus RIMD 2210633] gi|308089317|gb|EFO39012.1| glutamate racemase [Vibrio parahaemolyticus Peru-466] gi|308092828|gb|EFO42523.1| glutamate racemase [Vibrio parahaemolyticus AN-5034] gi|308108436|gb|EFO45976.1| glutamate racemase [Vibrio parahaemolyticus AQ4037] gi|308111294|gb|EFO48834.1| glutamate racemase [Vibrio parahaemolyticus K5030] Length = 270 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 82/260 (31%), Positives = 133/260 (51%), Gaps = 10/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + L+ S L EE G + DE+K + + Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKSILSPL-----CNKV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV VL CTH+PLI + +Q+ V +D+ ++IARR + LL + + +F Sbjct: 179 DVAVLGCTHFPLIKNEIQQVLGSNVVLIDSGEAIARRVKALLS-CGELEEKEEGIKRIFA 237 Query: 253 SGKP--DIAMRRLMQGFGLK 270 S P + A+ + G Sbjct: 238 SAPPWQEDALNICLAKLGFN 257 >gi|254428102|ref|ZP_05041809.1| glutamate racemase [Alcanivorax sp. DG881] gi|196194271|gb|EDX89230.1| glutamate racemase [Alcanivorax sp. DG881] Length = 263 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSGIGGL + +++R L+P + +YVAD + PYG +H +++R + +++ Sbjct: 5 GPIGIFDSGIGGLSIARRIRELLPNENLLYVADSIHAPYGEKSEHYIQQRSDAITRFLME 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA +LR+ + ++ +G P IK AA ++SG+I +L+T TL+ Sbjct: 65 -NEAKAIVVACNTATVSAIRQLRADY-TLPIIGVEPGIKPAALQSKSGVIGVLATSQTLK 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +NL + + + L ++E +++ + + + K D Sbjct: 123 SESFNNLSRLFSENVRVEIQPCPGLVEQIEA----LELDSEATQTLVARYVQPLIQKGAD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252 IVL CTHY + + R+ + V+ ++ ++AR L N + + Sbjct: 179 HIVLGCTHYAFLAPLIRRAAGAHVEVVNTDMAVARETVRRLQMHNLLSDSPQAGSATFWS 238 Query: 253 SGKPDIAMRRLMQGFG 268 S +P +A R+L + +G Sbjct: 239 SAEPSLAHRQLSELWG 254 >gi|260887883|ref|ZP_05899146.1| glutamate racemase [Selenomonas sputigena ATCC 35185] gi|260862389|gb|EEX76889.1| glutamate racemase [Selenomonas sputigena ATCC 35185] Length = 281 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 5/248 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I +FDSG+GG+ VL+++ L+P+ FIY D PYG + ++ Sbjct: 27 KKEQPIGVFDSGLGGISVLRELVSLLPKEDFIYFGDAAHAPYGERTEREIRALTTAQIDR 86 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + V+ACNTA + LR + + +G PA+K A + + +++T A Sbjct: 87 M-AAEGVKAVVLACNTATSAACAPLRRRYRQIPIIGMEPALKPAILSGEKPRVVVMATHA 145 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR+ + L+ + I + + VE +I+ + + +E F+ K Sbjct: 146 TLRQKKFARLMERFKDAGEIVKLPCPEIVEFVERG----EIRSAALHEYLEERFLSVSQK 201 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTH+P + + + V D + AR + L + + Sbjct: 202 PIDCVVLGCTHFPFVRDAIQDVVGQAVQIFDGAAGTARELKRRLLEADALRESGQKGAIE 261 Query: 251 FLSGKPDI 258 +LS D Sbjct: 262 WLSSSSDP 269 >gi|328472462|gb|EGF43328.1| glutamate racemase [Vibrio parahaemolyticus 10329] Length = 270 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 82/260 (31%), Positives = 133/260 (51%), Gaps = 10/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + L+ S L EE G + DE+K + + Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKSILSPL-----CNKV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV VL CTH+PLI + +Q+ V +D+ ++IARR + LL + + +F Sbjct: 179 DVAVLGCTHFPLIKNEIQQVLGSNVVLIDSGEAIARRVKALLS-CGELEEKEEGIKRIFA 237 Query: 253 SGKP--DIAMRRLMQGFGLK 270 S P + A+ + G Sbjct: 238 SAPPWQEDALNICLAKLGFN 257 >gi|327332416|gb|EGE74152.1| glutamate racemase [Propionibacterium acnes HL097PA1] Length = 284 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYDVSVIDVIMPAARRASAATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VE+ E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ + D Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMAESGLLHSHPRD 237 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|330838748|ref|YP_004413328.1| Glutamate racemase [Selenomonas sputigena ATCC 35185] gi|329746512|gb|AEB99868.1| Glutamate racemase [Selenomonas sputigena ATCC 35185] Length = 283 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 5/248 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I +FDSG+GG+ VL+++ L+P+ FIY D PYG + ++ Sbjct: 29 KKEQPIGVFDSGLGGISVLRELVSLLPKEDFIYFGDAAHAPYGERTEREIRALTTAQIDR 88 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + V+ACNTA + LR + + +G PA+K A + + +++T A Sbjct: 89 M-AAEGVKAVVLACNTATSAACAPLRRRYRQIPIIGMEPALKPAILSGEKPRVVVMATHA 147 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR+ + L+ + I + + VE +I+ + + +E F+ K Sbjct: 148 TLRQKKFARLMERFKDAGEIVKLPCPEIVEFVERG----EIRSAALHEYLEERFLSVSQK 203 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTH+P + + + V D + AR + L + + Sbjct: 204 PIDCVVLGCTHFPFVRDAIQDVVGQAVQIFDGAAGTARELKRRLLEADALRESGQKGAIE 263 Query: 251 FLSGKPDI 258 +LS D Sbjct: 264 WLSSSSDP 271 >gi|237737770|ref|ZP_04568251.1| glutamate racemase [Fusobacterium mortiferum ATCC 9817] gi|229419650|gb|EEO34697.1| glutamate racemase [Fusobacterium mortiferum ATCC 9817] Length = 262 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 11/260 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + SI +FDSG+GG VL+++ ++P + Y D PYG +++ + + Sbjct: 5 KQSIGVFDSGVGGTTVLKEILSILPNENIFYYGDSKNSPYGQKSAEEIRELCYKILDFFI 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 + V+ACNTA D L++ + S+ +G + A +K+A + + I+IL+TP T Sbjct: 65 A-NECKAVVVACNTATAAALDSLKNRY-SIPIIGVIDAGVKRALKVSSNNKINILATPFT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + +E K + + +K I+ K+ Sbjct: 123 VSSKAYITKFNKISKNISVTQEGCPEFCTMIETGWETHKDRYELLKNHIDNL-----SKK 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-L 250 D ++L CTHYP+I + +D + A LL ++ T Sbjct: 178 ADTLILGCTHYPIIREDIEKYFSG--KIVDPARETALELYSLLKLSDSLNTSDKKGRVDF 235 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 F+SG + + + G + Sbjct: 236 FVSGNKERFKKIAEKFLGFE 255 >gi|260553350|ref|ZP_05825964.1| glutamate racemase [Acinetobacter sp. RUH2624] gi|260405187|gb|EEW98685.1| glutamate racemase [Acinetobacter sp. RUH2624] Length = 266 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 6/249 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNKNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSRYVPYGDRESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + + V+ACNT + + +R+ ++ + PA+K A A T S I++L+T Sbjct: 61 SNLVAQGKCKAIVVACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAMTVSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E E+K ++ Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235 Query: 248 HALFLSGKP 256 H ++ S P Sbjct: 236 HIIWTSSDP 244 >gi|229497077|ref|ZP_04390781.1| glutamate racemase [Porphyromonas endodontalis ATCC 35406] gi|229316002|gb|EEN81931.1| glutamate racemase [Porphyromonas endodontalis ATCC 35406] Length = 277 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 12/260 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL +L+++R LMP+Y ++Y+ D+ PYG+ + K + + + Sbjct: 6 APIGIFDSGYGGLTILREIRKLMPQYDYLYLGDNARSPYGSRSFEIVYKFTLQAVERLFE 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRST------FPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 P L ++ACNTA ++ PS LG + P ++ T S + IL Sbjct: 66 MGCP-LVILACNTASAKALRTIQQQDLPQMSDPSRRVLGIIRPTVEAVDTITASKHVGIL 124 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ I + + + VE + ++K ++ Sbjct: 125 ATEGTVSSHSYQMEIAKLFPHIIVSEEACPMWVPLVENGEADSPGADYYVRKHLDALLC- 183 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-- 244 + K D IVLACTHYPL+ ++L + + + +A + L R R+ Sbjct: 184 -KDKAIDTIVLACTHYPLLRQKIKRLITPSITVVSQGEYVASSLQDYLGRQTEMDARLSK 242 Query: 245 FDDHALFLSGKPDIAMRRLM 264 + + D + Sbjct: 243 SGSIRYLTTEQADKFAEKAS 262 >gi|83716465|ref|YP_440215.1| glutamate racemase [Burkholderia thailandensis E264] gi|167616909|ref|ZP_02385540.1| glutamate racemase [Burkholderia thailandensis Bt4] gi|257140841|ref|ZP_05589103.1| glutamate racemase [Burkholderia thailandensis E264] gi|83650290|gb|ABC34354.1| glutamate racemase [Burkholderia thailandensis E264] Length = 288 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 8/262 (3%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + Sbjct: 11 SPARSPIGIFDSGLGGLSVLRAVRERLPDEAIVYVADSRHAPYGPRDDAFIIERTLAIGE 70 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++ + L V+ACNTA +R P + +G P IK AA ++++ + +L+T Sbjct: 71 WLVAQGAKAL-VVACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQ 128 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ATLR LI + + C + L +E G E++ ++ G Sbjct: 129 ATLRSARFEALIARHAADCRFICQAGHGLVEAIERGDTG----SPELRAQLAGFLEPMLE 184 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDD 247 D +VL CTHYP + R ++ + +D SD+IAR+ +L + Sbjct: 185 AGADTLVLGCTHYPFLDAAIRDVTSSRLHLIDTSDAIARQLARILDERGLRAPASSRPAP 244 Query: 248 HALFLSGKPDIAMRRLMQGFGL 269 L +G GL Sbjct: 245 PRLCSTGDGRHLQTLAATLLGL 266 >gi|260592030|ref|ZP_05857488.1| glutamate racemase [Prevotella veroralis F0319] gi|260536314|gb|EEX18931.1| glutamate racemase [Prevotella veroralis F0319] Length = 279 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + + + Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVMKLFE 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ CNTA ++ P LG + P + T+S + +L+ Sbjct: 69 SG-CQLVILGCNTASAKALRSIQQNDLPKLDPQRRVLGVIRPTAEVIGKLTRSHHVGLLA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + I + V+ + +E + +KK I+ I + Sbjct: 128 TEGTVKSQSYNIEIQKLWPDVKVTGVACPLWVPIIENNEADSPGADYFVKKRIDH--IMR 185 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 D ++L CTHYP+++ + P V + + +A + L R + R Sbjct: 186 IDPEIDTLILGCTHYPILMPKIIKYVPRGVRIVPQGEYVAESLQDYLRRHPDMEQRCTKH 245 Query: 246 DDHALFLSGKPDIAMR 261 + P+ Sbjct: 246 ATVRYLTTENPEKFKE 261 >gi|68535566|ref|YP_250271.1| glutamate racemase [Corynebacterium jeikeium K411] gi|68263165|emb|CAI36653.1| murI [Corynebacterium jeikeium K411] Length = 288 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 112/267 (41%), Gaps = 9/267 (3%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 N + I +FDSG+GGL V + + +P + +Y+ D PYG+ +++ Sbjct: 14 NVQAVQANNAPIGVFDSGVGGLTVARAIVDQLPHENLVYIGDTANSPYGDKPLAQVRELS 73 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + + + ++ + V+ACN+A + + R + +PA+++AAA T++G I Sbjct: 74 IRIADTLAERG-CKMIVVACNSASSAFIRDARERYSIPVVEVILPAVRRAAAATRNGRIG 132 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 ++ T AT+ +L + + + VE + ++ E Sbjct: 133 VIGTQATVNSMSYQDLFAAI-PGVEAYAQACPQFVPFVERGMTSGR----QLMGLAENYL 187 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + + D +VL CTHYPL+ V + + V +++++ A+ L + Sbjct: 188 APLKAQGVDTVVLGCTHYPLLTGVVQLVMGEDVTLINSAEETAKTVYRTLAEQDLLADED 247 Query: 245 FD---DHALFLSGKPDIAMRRLMQGFG 268 + + + +G P + + G Sbjct: 248 SERTVNLSFESTGDPQRFAKLAGRFLG 274 >gi|56964421|ref|YP_176152.1| glutamate racemase [Bacillus clausii KSM-K16] gi|81600804|sp|Q5WEL9|MURI_BACSK RecName: Full=Glutamate racemase gi|56910664|dbj|BAD65191.1| glutamate racemase [Bacillus clausii KSM-K16] Length = 276 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 101/248 (40%), Gaps = 9/248 (3%) Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85 L V ++ +P+ +Y+ D PYG ++ + +L + + VIACN Sbjct: 15 LTVASEIMRQLPKEPIVYIGDSARCPYGPRPVEEVRAFTWQMIGRLLHE-DVKMIVIACN 73 Query: 86 TAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144 TA ++ +E R+ + +G + P A +++ ++++ T T+ + +HS Sbjct: 74 TATAVVLEEARAQL-DIPVVGVIRPGAISAIQVSENRHVAVIGTIGTIASNAYTMALHSI 132 Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204 + ++ + VE+ IK E + + +G D ++L CTHYPL Sbjct: 133 DENVTVESLACPLFVPLVEQG----TIKGPEAEAVVRESLAPLQGAGFDTLILGCTHYPL 188 Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRL 263 + V P V + + + AR LL + ++ H + +G+ + + Sbjct: 189 LKPVIEACLPS-VTVISSGEETAREVSSLLFYHSMNEQHQAKATHRFYTTGEANQFKQLA 247 Query: 264 MQGFGLKS 271 + + Sbjct: 248 ASWLNIHT 255 >gi|302876669|ref|YP_003845302.1| glutamate racemase [Clostridium cellulovorans 743B] gi|307687344|ref|ZP_07629790.1| glutamate racemase [Clostridium cellulovorans 743B] gi|302579526|gb|ADL53538.1| glutamate racemase [Clostridium cellulovorans 743B] Length = 259 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 6/235 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I DSG+GGL V+++ +P+ + I+ D PYG D +KK L F + L Sbjct: 6 KPIGFMDSGVGGLSVMKEAIKALPQENLIHFGDSKNAPYGIKTDEEIKK-LTFSAVEFLI 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K Q VIACNTA ++ ++LR + + +G PA+K A + G I +++TP TL+ Sbjct: 65 KKQCKAIVIACNTATSVAINDLREIYKEVPIIGIEPAVKPAVELNEDGKIIVMATPVTLK 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + ++L+ Y S I + L +E ++ +E+ + F + Sbjct: 125 KEKFNHLLEMYGSDREIIFLPCPELVELIERGV----LEGEELDNYLLSKFKPYLNDKIS 180 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 +VL CTHYP +++ +D S ++ + +L R + Sbjct: 181 AVVLGCTHYPFAKKAIKKIVG-DAKIIDGSYGTVKQLKNILMRRDELNDSNSKGT 234 >gi|326336585|ref|ZP_08202754.1| glutamate racemase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691250|gb|EGD33220.1| glutamate racemase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 259 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 8/251 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FDSG+GG + + + L+P +++AD + PYG + + Sbjct: 1 MNTPIGLFDSGVGGTTIWRTLVRLLPYEDTLFLADSIHAPYGEKTSEEIIALCEKNTEYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + L ++ACNTA T LR+ + + F+G PAIK A Y+Q+ I +L+T +T Sbjct: 61 LE-HNSKLIIVACNTATTNAISHLRAKYK-VPFIGIEPAIKPAGLYSQTKTIGVLATQST 118 Query: 132 LRRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 LR + + + H+ + L +EE +I E+ + +E + Sbjct: 119 LRSAFFARTCQQLFDKGIHVIKQEGVGLVPLIEEG----RINTPEMIELLEKYLQPMIEQ 174 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249 D +VL CTHYP + + ++ P V +D+++++A++ + +L + + + H Sbjct: 175 NMDYLVLGCTHYPYLTSLISEILPEKVRIMDSAEAVAKQTQRILSQNQLLTENKATPSHL 234 Query: 250 LFLSGKPDIAM 260 + +I Sbjct: 235 WLTNKNVEILQ 245 >gi|304384311|ref|ZP_07366722.1| glutamate racemase [Prevotella marshii DSM 16973] gi|304334627|gb|EFM00909.1| glutamate racemase [Prevotella marshii DSM 16973] Length = 278 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I +FDSG GGL +L ++R +P Y +IY+ D+ PYG+ + + + Sbjct: 8 GAIGVFDSGYGGLTILHEIRQQLPMYDYIYIGDNARAPYGSRSFDVVYEFTRQAVMKLFA 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + L ++ACNTA ++ +PS LG + P + T + + I++ Sbjct: 68 QG-CRLVILACNTASAKALRTIQQHDLPTTYPSRRVLGVIRPTAEVIGDITTTRHVGIVA 126 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP T++ I + + + A+ VE K + +KK ++ + Sbjct: 127 TPGTIKSRSYEMEIGKLYPDIIVTGQACPLWAAIVEANEADSKGADYFVKKRLDE--LMS 184 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + D ++L CTHYPL++ R+ P V + +AR L R +R Sbjct: 185 KDPHIDSLILGCTHYPLLLSKIRKHLPASVHIIPQGCYVARSLDDYLHRHPEIASRCTQG 244 Query: 246 DDHALFLSGKPDIAMR 261 + P+ Sbjct: 245 GTCRYLTTESPERFQE 260 >gi|183602360|ref|ZP_02963726.1| glutamate racemase [Bifidobacterium animalis subsp. lactis HN019] gi|219683325|ref|YP_002469708.1| glutamate racemase [Bifidobacterium animalis subsp. lactis AD011] gi|241191286|ref|YP_002968680.1| glutamate racemase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196692|ref|YP_002970247.1| glutamate racemase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254766107|sp|B8DT03|MURI_BIFA0 RecName: Full=Glutamate racemase gi|183218279|gb|EDT88924.1| glutamate racemase [Bifidobacterium animalis subsp. lactis HN019] gi|219620975|gb|ACL29132.1| glutamate racemase [Bifidobacterium animalis subsp. lactis AD011] gi|240249678|gb|ACS46618.1| glutamate racemase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251246|gb|ACS48185.1| glutamate racemase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177402|gb|ADC84648.1| Glutamate racemase [Bifidobacterium animalis subsp. lactis BB-12] gi|295794279|gb|ADG33814.1| glutamate racemase [Bifidobacterium animalis subsp. lactis V9] Length = 258 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 7/257 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +FDSG+GG+ V++++R +P +Y D PYG ++ + D + Sbjct: 4 SAPVGVFDSGLGGISVVRQIRTDLPHERILYFGDSANAPYGTKTPEQVRDLSFRIVEDFV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL--ISILSTPA 130 ++ VIACNTA + ELR + + +G PA+K A + + +TP Sbjct: 64 EQGA-KAVVIACNTATSSAVQELREHY-DIPIIGMEPALKVACDRGHGERQSVIVAATPL 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+H + IH L VE D + + + F + + Sbjct: 122 TLRERKFAALMHRFEDAHTIHKQPCPRLVEIVERGELD---DHDLVMRTLHDYFDQYDLA 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 TD +VL CTH+ FR+L P V +D ++ AR +L + D + Sbjct: 179 HTDSVVLGCTHFVFYRDYFRELLPNNVAIVDGNEGTARHLEVVLESLGKLAPEEQDGGVI 238 Query: 251 FLSGKPDIAMRRLMQGF 267 + P + L Q Sbjct: 239 LRNSDPGERIAELAQQL 255 >gi|225017223|ref|ZP_03706415.1| hypothetical protein CLOSTMETH_01149 [Clostridium methylpentosum DSM 5476] gi|224949998|gb|EEG31207.1| hypothetical protein CLOSTMETH_01149 [Clostridium methylpentosum DSM 5476] Length = 268 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 4/257 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++I IFDSG+GGL V+++++ ++P + +Y D PYG + S L Sbjct: 3 NSAIGIFDSGVGGLTVVKELKRILPHENLVYFGDTGRVPYGTRSRQTIIDYAKQDLS-FL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + +++ AC T ++ +E+ P +PA++ A + T SG I +L T AT+ Sbjct: 62 KSKEIKMAIAACGTVSAVLPNEIIDELPFPYTGVLLPAVQTACSKTISGHIGVLGTSATI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R I + + I + + VE ++ + + + G Sbjct: 122 RSGAYGKAIRTILPNARITGIPCPLFVPLVENGY--VQRDNQVTRLVAQDYLKQVLGSDI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251 D ++L CTH+PL+ + + V +D AR A +L T+ ++ F Sbjct: 180 DTLILGCTHFPLLKAIIGDIVGPDVRLIDPGRETARFAASVLTSEGLLNTQEERGSYSFF 239 Query: 252 LSGKPDIAMRRLMQGFG 268 +S P+ G Sbjct: 240 VSDSPESFTESANLFLG 256 >gi|302346059|ref|YP_003814412.1| glutamate racemase [Prevotella melaninogenica ATCC 25845] gi|302149137|gb|ADK95399.1| glutamate racemase [Prevotella melaninogenica ATCC 25845] Length = 279 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 11/260 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + Sbjct: 5 SKQPGPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVM 64 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123 + D L ++ CNTA ++ P LG + P + T+S + Sbjct: 65 KLFD-LGCQLVILGCNTASAKALRTIQQNDLPNLDPDRRVLGVIRPTAEVIGKLTRSRHV 123 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T++ + I + V + +E + +KK I+ Sbjct: 124 GVLATEGTIKSDSYNLEIQKLWEDVKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH- 182 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 I + D ++L CTHYP+++ + P V + + +A + R R Sbjct: 183 -IMRLDPEIDTLILGCTHYPILMPKILKHVPRGVRIVPQGEYVAESLQDYFRRHPDMDAR 241 Query: 244 VFDD--HALFLSGKPDIAMR 261 + + + P+ Sbjct: 242 CTKNATVKYYTTENPEKFKE 261 >gi|332519960|ref|ZP_08396424.1| glutamate racemase [Lacinutrix algicola 5H-3-7-4] gi|332044519|gb|EGI80713.1| glutamate racemase [Lacinutrix algicola 5H-3-7-4] Length = 260 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 7/253 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +NSI IFDSG+GG + +++ L+P IY+AD PYG+ + + + ++ Sbjct: 3 KNSIGIFDSGVGGTSIFKEIHALLPNESTIYLADSKYAPYGSKTKNEIIDLSIKNTEFLI 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D + VIACNTA T D LR+T+ + F+G PAIK AA TQ+ I IL+T TL Sbjct: 63 D-NNCKIIVIACNTATTNAIDILRNTYK-IPFIGIEPAIKPAALQTQTKAIGILATKGTL 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y + + + +E E +KK ++ E Sbjct: 121 SSALFHKTTDLYTNGIKVIEQVGEGIVQLIENGDLHTPKMEFLLKKYLQPMLAE----NI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251 D +VL CTHYP ++ + L P V +D+ ++A++ + +L + N + ++ + Sbjct: 177 DYLVLGCTHYPYLMPILLNLLPKHVKIIDSGLAVAKQTKSVLEQYNLLNSIGKKPNNDFY 236 Query: 252 LSGKPDIAMRRLM 264 ++ K M+ L+ Sbjct: 237 INIKNTAVMQSLL 249 >gi|291562561|emb|CBL41377.1| glutamate racemase [butyrate-producing bacterium SS3/4] Length = 275 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 20/270 (7%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M DN P I + DSG+GG+ VL+++ LMP F+Y D PYG + Sbjct: 18 MNTDNRP--------IGVLDSGLGGISVLRELVKLMPGEAFLYYGDSANAPYGTRTPEEV 69 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYT 118 +L++ V+ACNTA ++ ELR + + +G PA+K A Sbjct: 70 IDLTKKDVDFLLERGA-KAIVVACNTATSVAIRELREEYEKKDIPVIGIEPALKPAVLAK 128 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 + + +++TP TL +T ++++H Y + +I + L +E G ++ + + Sbjct: 129 EHSKVVVMATPMTLSQTKFNSMLHVYEDEANIIKMPCPGLVEYIE----GGMLEGPVLDE 184 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +E F E D +VL CTHYPL+ ++ P V D A++ R L Sbjct: 185 YLEKQFEPYEKSEIDAVVLGCTHYPLVKDEIQKHLP-GVAIYDGGFGTAKQTRKRLTECG 243 Query: 239 THQTRVF-DDHALFLSGKPD---IAMRRLM 264 + + +F S + RRL+ Sbjct: 244 LLSGKESGGEVKIFNSKNTEDVLELSRRLL 273 >gi|184156710|ref|YP_001845049.1| glutamate racemase [Acinetobacter baumannii ACICU] gi|332873119|ref|ZP_08441076.1| glutamate racemase [Acinetobacter baumannii 6014059] gi|183208304|gb|ACC55702.1| Glutamate racemase [Acinetobacter baumannii ACICU] gi|322506599|gb|ADX02053.1| murI [Acinetobacter baumannii 1656-2] gi|323516476|gb|ADX90857.1| glutamate racemase [Acinetobacter baumannii TCDC-AB0715] gi|332738631|gb|EGJ69501.1| glutamate racemase [Acinetobacter baumannii 6014059] Length = 288 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 12/266 (4%) Query: 7 PCEKKL-QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K L I IFDSGIGG+ V ++ +P +Y AD PYG D +++ Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124 D L + ++V+ACNTA D LR + +G VPA+K A T+S +++ Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+TPAT R +++ + + + ++S+ L VE + +++ ++ Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPACLNALREVLQ- 190 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYP + L +D+ ++AR+ +L + Sbjct: 191 ---PAVEQGADYLVLGCTHYPFLNEAIHYLFDNQFTLVDSGLAVARQTARILIKNELLCD 247 Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265 ++ + A ++SG A++ ++Q Sbjct: 248 QMRQNVARIECYVSGNNADALQPVLQ 273 >gi|218782867|ref|YP_002434185.1| glutamate racemase [Desulfatibacillum alkenivorans AK-01] gi|218764251|gb|ACL06717.1| glutamate racemase [Desulfatibacillum alkenivorans AK-01] Length = 264 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 5/220 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL V + + L P + Y D PYG + + + +LD+ Sbjct: 2 IGIFDSGIGGLTVARAVMELFPHLNICYFGDTARTPYGTKSKDTVTRYAVENTRFLLDQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA + LR F F PA+ A + ++ I ++ T T+ Sbjct: 62 A-KIIVVACNTASAVAVPTLRERFDVPIFEVISPAVDMALSLAKAKRIGVIGTRGTINSG 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI + + +L S VEE +K+ E + ++ + ++ + Sbjct: 121 IYERLIKERDPERKVFSEPCPLLVSLVEEGW----LKKPETRMIVKKYLHPLKAQQIQSL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 +L CTHYP+I + + V +D+S++++ + L Sbjct: 177 ILGCTHYPIIKQLIARKIGKRVKIVDSSEAVSVSLKRYLD 216 >gi|226941421|ref|YP_002796495.1| glutamate racemase [Laribacter hongkongensis HLHK9] gi|226716348|gb|ACO75486.1| MurI [Laribacter hongkongensis HLHK9] Length = 272 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 9/260 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSGIGGL V++ + +P +Y D PYG ++ + +L Sbjct: 6 RRPIGVFDSGIGGLTVVRALMDRLPFEDILYFGDSARVPYGTKSVATIQHYTREIAEFLL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAA-AYTQSGLISILSTP 129 + +IACNT + D +RS + L + A QAA A ++SG I +++TP Sbjct: 66 AR-DVKALIIACNTMAAVAADVVRSVAEPLGVPVLDVIDAGSQAAVAASRSGEIGVIATP 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ + IH Q ++ + + VEE + ++ ++ +E Sbjct: 125 TTINANAYARAIHVMNPQARLYSQACPLFVPLVEEGWLDHPVTRLTAEEYLKTVLVE--- 181 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-H 248 D +VL CTHYPL+ + ++ V +D++ + A+ L R+ + + Sbjct: 182 -EVDTLVLGCTHYPLLKPLLADVAGPGVQLVDSAVTTAQATAATLERLGLLNPPAAETYY 240 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 F++ P + G Sbjct: 241 RYFVTDIPLKFQTIGERFLG 260 >gi|169797366|ref|YP_001715159.1| glutamate racemase [Acinetobacter baumannii AYE] gi|213155819|ref|YP_002317864.1| glutamate racemase [Acinetobacter baumannii AB0057] gi|215484806|ref|YP_002327041.1| glutamate racemase [Acinetobacter baumannii AB307-0294] gi|301345461|ref|ZP_07226202.1| glutamate racemase [Acinetobacter baumannii AB056] gi|301511091|ref|ZP_07236328.1| glutamate racemase [Acinetobacter baumannii AB058] gi|332851876|ref|ZP_08433779.1| glutamate racemase [Acinetobacter baumannii 6013150] gi|332867934|ref|ZP_08437922.1| glutamate racemase [Acinetobacter baumannii 6013113] gi|169150293|emb|CAM88190.1| glutamate racemase [Acinetobacter baumannii AYE] gi|213054979|gb|ACJ39881.1| glutamate racemase [Acinetobacter baumannii AB0057] gi|213987180|gb|ACJ57479.1| glutamate racemase [Acinetobacter baumannii AB307-0294] gi|332729661|gb|EGJ60997.1| glutamate racemase [Acinetobacter baumannii 6013150] gi|332733635|gb|EGJ64794.1| glutamate racemase [Acinetobacter baumannii 6013113] Length = 288 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 12/266 (4%) Query: 7 PCEKKL-QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K L I IFDSGIGG+ V ++ +P +Y AD PYG D +++ Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124 D L + ++V+ACNTA D LR + +G VPA+K A T+S +++ Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+TPAT R +++ + + + ++S+ L VE + + +++ ++ Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ- 190 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYP + L +D+ ++AR+ +L + Sbjct: 191 ---PAVEQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCD 247 Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265 ++ + A ++SG ++ ++Q Sbjct: 248 QIRQNVARIECYVSGNNADVLQPVLQ 273 >gi|288801916|ref|ZP_06407358.1| glutamate racemase [Prevotella melaninogenica D18] gi|288335958|gb|EFC74391.1| glutamate racemase [Prevotella melaninogenica D18] Length = 279 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 11/260 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + Sbjct: 5 SKQPGPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVM 64 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123 + + L ++ CNTA ++ P LG + P + T S + Sbjct: 65 KLFE-LGCQLVILGCNTASAKALRTIQQNDLPNLDPDRRVLGVIRPTAEVIGKLTHSRHV 123 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T++ + I + V + +E + +KK I+ Sbjct: 124 GVLATEGTIKSDSYNLEIQKLWGDVKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH- 182 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 I + D ++L CTHYP+++ + P V + + +A + R R Sbjct: 183 -IMRLDPEIDTLILGCTHYPILMPKILKHVPRGVRIVPQGEYVAESLQDYFRRHPDMDAR 241 Query: 244 VFDD--HALFLSGKPDIAMR 261 + + + P+ Sbjct: 242 CTKNATVKYYTTENPEKFKE 261 >gi|294634282|ref|ZP_06712824.1| glutamate racemase [Edwardsiella tarda ATCC 23685] gi|291092322|gb|EFE24883.1| glutamate racemase [Edwardsiella tarda ATCC 23685] Length = 260 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 125/236 (52%), Gaps = 3/236 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V Q+++ L+P+ H+IY D+ GFPYG E + +R++ + I ++ Sbjct: 2 LVFDSGVGGLSVYQEIQALLPDLHYIYAFDNQGFPYGEKEAAFITERVLLIVEAIQRRHT 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA T++ LR F S +G VPAIK AA T++G++ +L+T AT++R Y Sbjct: 62 LSAMVVACNTASTIVLPALRERF-SFPVVGVVPAIKPAAKLTRNGIVGLLATRATVQRAY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T L+ + + C I ++ S L E G ++ ++ + E D +V Sbjct: 121 THELVARFAADCQIKMLGSAELVEIAEAKLHGEAVELQRLRAILRPWLTMAEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 L CTH+PL+ Q+ P +D+ +IARR L+ T + A Sbjct: 179 LGCTHFPLLRAELAQVLPVGTRMVDSGAAIARRVAWLIANQPTLTGTDRRNVAYAT 234 >gi|193078720|gb|ABO13787.2| Glutamate racemase [Acinetobacter baumannii ATCC 17978] Length = 266 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 6/249 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKYIRQALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + VIACNT + + +R+ ++ + PA+K A A T S I++L+T Sbjct: 61 SNLVTHGKCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAMTLSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E E+K ++ Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235 Query: 248 HALFLSGKP 256 H ++ S P Sbjct: 236 HIIWTSSDP 244 >gi|189464295|ref|ZP_03013080.1| hypothetical protein BACINT_00636 [Bacteroides intestinalis DSM 17393] gi|189438085|gb|EDV07070.1| hypothetical protein BACINT_00636 [Bacteroides intestinalis DSM 17393] Length = 279 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 107/260 (41%), Gaps = 11/260 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + Sbjct: 6 PTIPGPIGVFDSGYGGLTILSKIREALPQYDYIYLGDNARTPYGTRSFEIVYEFTLQAVT 65 Query: 70 DILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123 + + L ++ACNTA +L P+ LG + P ++ + TQS + Sbjct: 66 KLFE-MGCHLVILACNTASAKALRSIQINDLPGMDPARRVLGVIRPTVECIGSITQSRHV 124 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T++ IH + + + S VE + ++K I Sbjct: 125 GVLATAGTIKSESYPLEIHKLFPDIQVAGEACPLWVSLVENNEAEGDGTDYFVRKYINEL 184 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + + D ++L CTHYPL++ ++ P + + + +A + R + Sbjct: 185 LA--KDAQIDTVILGCTHYPLLLPKIKKHMPDGITTVAQGELVADSLKDYFHRHPEMDAK 242 Query: 244 --VFDDHALFLSGKPDIAMR 261 + + + + + Sbjct: 243 CTKGGNCTYYTTEAEEKFIE 262 >gi|269216891|ref|ZP_06160745.1| glutamate racemase [Slackia exigua ATCC 700122] gi|269129698|gb|EEZ60782.1| glutamate racemase [Slackia exigua ATCC 700122] Length = 430 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 17/258 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG GGL V +++ LMP +Y D PYG + H + + + + + Sbjct: 146 NAPIGVFDSGYGGLTVAREIAALMPHESIVYFGDTARCPYGPRDPHEVAEFVQQIGRWLT 205 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPAT 131 + + VIACNTA + + TF S+ G P + AA T +G + ++ T T Sbjct: 206 AR-NVKMLVIACNTATAAGLERAQQTF-SVPVRGAVEPGARAAARATHNGRVGVIGTKGT 263 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI-----KKEIEG---- 182 + I + + + +++ VE K +++ K I Sbjct: 264 IESDCYPRAIRAIDAGLTVFSIATPRFVEIVENGIRLSKGPIEDLTSMASKAYIRPSFQA 323 Query: 183 ----CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRI 237 D +VLACTHYPL+ + + V + +S+++A R L R Sbjct: 324 IAREYLEPLRRCHVDALVLACTHYPLLKALIGGVMGHKVLLVSSSEALAHDVRATLTARR 383 Query: 238 NTHQTRVFDDHALFLSGK 255 T + + + + Sbjct: 384 QTASPDAVPVYEFYTTSE 401 >gi|293607195|ref|ZP_06689536.1| glutamate racemase [Achromobacter piechaudii ATCC 43553] gi|292814287|gb|EFF73427.1| glutamate racemase [Achromobacter piechaudii ATCC 43553] Length = 279 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 8/239 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I ++DSG+GGL VL+ +R + + +YVAD PYG +++R + + + Sbjct: 8 SPIGVYDSGVGGLSVLRAIRDALSDESLLYVADSAHVPYGEKSQDFVEQRALTVADYFVS 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ + V+ACNTA ++R P + +G PAIK AA T SG++ + +T TL Sbjct: 68 RHAKAM-VVACNTATAAAIAQVRRRHPGLIVIGVEPAIKPAAHLTHSGVVGVFATTGTLA 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ + I L VE+ ++ + + G + D Sbjct: 127 SPKFAALVQREAPEVRILLHPCPQWVRLVEQG----ELSGPAVDAAVAGPVAQLRAAGAD 182 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFDDHA 249 V+VL CTH+P + + + V L+ +AR R L R D HA Sbjct: 183 VLVLGCTHFPFLRDAIQAAAGPGVPLLETGAPVARWLRHQLQERALLCTDSARTADTHA 241 >gi|124266488|ref|YP_001020492.1| glutamate racemase [Methylibium petroleiphilum PM1] gi|124259263|gb|ABM94257.1| glutamate racemase [Methylibium petroleiphilum PM1] Length = 276 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 7/272 (2%) Query: 1 MKIDNYPCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59 M P + + + I +FDSG+GGL VL+ + +P +YVAD PYG ++ Sbjct: 1 MTNTAAPLDDRPSAACIGVFDSGVGGLSVLRALHRHLPHSRLLYVADSGFAPYGERDEGY 60 Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 + +R L + +L + L V+ACNTA LR + F+G P IK A A ++ Sbjct: 61 VVERSRVLTTHLL-REGAQLIVVACNTATAAAVRALREEHADVQFVGVEPGIKPAIALSR 119 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 SG I +++T TL L+ S+ +HL + LA +E E+ Sbjct: 120 SGRIGVMATRGTLASDKFRRLVSSHAQGAQLHLQACAGLAHAIEAGDAN----SAEVLAL 175 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 ++ D +VL CTHYP + ++ V +D +D++ARR + L+ + + Sbjct: 176 VDRYTAPLREAAVDTVVLGCTHYPFVAQHIQRALGAGVQLVDTADAVARRVQQLIVGLRS 235 Query: 240 HQTR-VFDDHALFLSGKPDIAMRRLMQGFGLK 270 + L+ +G + + Sbjct: 236 ADVQAAARPARLWTTGDLATLTLVAGRWLDFE 267 >gi|326800551|ref|YP_004318370.1| glutamate racemase [Sphingobacterium sp. 21] gi|326551315|gb|ADZ79700.1| Glutamate racemase [Sphingobacterium sp. 21] Length = 276 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 103/265 (38%), Gaps = 11/265 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL V +++ +P+Y +IY D+ PYG + M + + D Sbjct: 2 GPIGIFDSGYGGLTVFKEISHTLPQYDYIYFGDNARVPYGTRSYDTVYHYTMECVNHLFD 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA ++ LG + P + +T S + IL+ Sbjct: 62 -LGCHLVILACNTASAKALRTIQQKDLPKRTDLRNVLGVIRPTTEIIDRFTISNHVGILA 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ IH + Q ++ + + VE +K+ I+ + Sbjct: 121 TSGTVNSASYVLEIHKFFPQIKVYQEACPMWVPLVENNEMDSPGARYFVKQHIDRLL--Q 178 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245 + D ++LACTHYPL++ ++ P V + +A+ L R + Sbjct: 179 QSTEIDAVILACTHYPLLLPTIKEFMPKGVQVISQGSIVAKSLADYLYRHKEIEALCTKN 238 Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270 F + + + +GL Sbjct: 239 GARQFFTTESVENFKEKASIFYGLP 263 >gi|160934063|ref|ZP_02081450.1| hypothetical protein CLOLEP_02926 [Clostridium leptum DSM 753] gi|156866736|gb|EDO60108.1| hypothetical protein CLOLEP_02926 [Clostridium leptum DSM 753] Length = 271 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 98/253 (38%), Gaps = 7/253 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL ++++R L+P +Y D PYGN + + + +L Sbjct: 4 NHPIGVFDSGVGGLTAVKELRALLPHEDIVYFGDTSRAPYGNRSRDTILRYARQDVNFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + + AC T ++ + + P P + A T++ I +++T AT+ Sbjct: 64 SQK-VKMIIAACGTVSSVAAS-MGQSLPVPFTGVVTPTCRAAVKATKNKRIGVIATAATI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE-GCFIEKEGKR 191 +++ + + + VE D++ + G Sbjct: 122 DSGSYRKELNALHPEIQVFEQPCPLFVPLVENAFID---PGDQVTNLVAQRYLSGLRGAG 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250 D ++L CTHYP+I + + V +D+ A A LL + +A Sbjct: 179 VDTLILGCTHYPIISAIISKAMGDQVTLIDSGRETAVYAARLLKDQQLLASGGQEGRNAF 238 Query: 251 FLSGKPDIAMRRL 263 ++S D + Sbjct: 239 YVSDSVDGFNQIA 251 >gi|304317524|ref|YP_003852669.1| glutamate racemase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779026|gb|ADL69585.1| glutamate racemase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 264 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 8/246 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL++++ L+P +IY D PYG ++K + + + Sbjct: 4 RPIGVFDSGVGGLTVLKRLKELLPNEDYIYFGDTKRVPYGEKSKKEIEKYARQIVHFMNE 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K + VIACNT I ++ + + F + AA T++ + +++T T+ Sbjct: 64 K-NTKIIVIACNTTCASID---KNEYSEILFNVLEAGAESAAYLTKNKKVGVIATTRTIE 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I S + + VEE DE K + + D Sbjct: 120 SRSYEKNIKLIDSGIDVFGKACPRFVPLVEEGLAN----SDEAFKCAKEYLSVLNNEEID 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP++++ + V +D + ++ + + L +R+ F+S Sbjct: 176 TLVLGCTHYPILINAIKNAVHKDVIIVDPAIKLSEKVKSYLEENAMLNSRLTGKTEYFVS 235 Query: 254 GKPDIA 259 G + Sbjct: 236 GNKENF 241 >gi|15806594|ref|NP_295309.1| glutamate racemase [Deinococcus radiodurans R1] gi|6459350|gb|AAF11147.1|AE002002_5 glutamate racemase [Deinococcus radiodurans R1] Length = 369 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 8/252 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG GGL VL +++ +P+ +Y+AD PYG D ++ ++++ + Sbjct: 98 PIGVFDSGAGGLSVLAELQRALPQEDVLYLADTAHVPYGARSDEDIRDLTARAVAELVRR 157 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA LR F + +G VPA+K A A T+SG++ +L+TP TLR Sbjct: 158 G-VKAVVVACNTASAFSLTHLRERF-ELPIIGLVPAVKPAVAATKSGVVGVLATPGTLRG 215 Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 T +++I + + + S L VE E + + Sbjct: 216 TLLADVIRQWAEPAGVRVMQAVSTELVPLVEAGKA----DSPEARVVLRDVLEPLAEAGA 271 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP + R +D+ ++AR R +L R + +L Sbjct: 272 DQLVLGCTHYPFLAGSIRAEFGDTFALVDSGAAVARHTRNVLSRGGLLRGGDRTGEVSYL 331 Query: 253 SGKPDIAMRRLM 264 + +R L+ Sbjct: 332 TTSDPAHLRALL 343 >gi|150389186|ref|YP_001319235.1| glutamate racemase [Alkaliphilus metalliredigens QYMF] gi|149949048|gb|ABR47576.1| glutamate racemase [Alkaliphilus metalliredigens QYMF] Length = 279 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 8/239 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E+ + I +FDSG+GG+ VL + +PE ++Y D PYG +KK + Sbjct: 3 EEIRKLPIGVFDSGVGGISVLADLISQLPEESYVYYGDSGNAPYGIKSKDEVKKLSFDVV 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +L + V+ACNTA + DELR++ + +G PA+K A SG + +++T Sbjct: 63 EFLLAQG-IKALVVACNTATSAAIDELRASL-DIPVIGMEPALKPALELHPSGRVIVMAT 120 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKEIEGCFIEK 187 P TLR + LI + + + L +E E A G ++ +E F Sbjct: 121 PVTLREKKFNTLIDRFNDCGEVIKLPCPGLVEIIEREGARG-----PALETYLEKLFSPF 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D IVL CTHY + ++ +D + A+ R LL N ++ D Sbjct: 176 NMEEIDAIVLGCTHYVFVRESIAEMIGNHAALIDGNGGTAKHVRRLLQEENLLVSQFKD 234 >gi|229815852|ref|ZP_04446176.1| hypothetical protein COLINT_02906 [Collinsella intestinalis DSM 13280] gi|229808547|gb|EEP44325.1| hypothetical protein COLINT_02906 [Collinsella intestinalis DSM 13280] Length = 297 Score = 272 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 103/263 (39%), Gaps = 18/263 (6%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + + I +FDSG+GGL V + + +P YV D PYG + ++ ++ Sbjct: 6 MRDCERPIGVFDSGLGGLTVARCIATSLPHESIYYVGDTKRCPYGVRPEEEVRSFVLQ-A 64 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L +++ + VIACNTA + P + +G + P + A T++ + +L+ Sbjct: 65 GRWLAEHEVKIMVIACNTATAAGLRIAQQVLP-VPVIGVIAPGARAAINSTRTRKVGVLA 123 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC------------GIKIKEDE 175 TP T+R + I + ++ + VE G E Sbjct: 124 TPLTVRTGAYTRAIQDLDAGVDVYGCPAPSFVEIVEHELATGAHLQERWLQNGDIFDTLE 183 Query: 176 IKKEIEGCFIEKE--GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 + E+E G + D +VL CTH+PL+ R V + +++ R + Sbjct: 184 NRVEVERTLAPIISGGAQVDTVVLGCTHFPLLAGPIRHALGPDVRVVSSAEETTRELEDI 243 Query: 234 LPRINTHQTRVF-DDHALFLSGK 255 L R + + +H + Sbjct: 244 LSRRDLLAPQTAQPEHRFATTSD 266 >gi|225023363|ref|ZP_03712555.1| hypothetical protein EIKCOROL_00221 [Eikenella corrodens ATCC 23834] gi|224943841|gb|EEG25050.1| hypothetical protein EIKCOROL_00221 [Eikenella corrodens ATCC 23834] Length = 271 Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL V++ + +P + +Y D PYG ++ + + L Sbjct: 8 QRPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRSTIETYTAQIV-EFL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPAT 131 ++ VIACNT + ++R T M L + A QAA T ++G I I++T T Sbjct: 67 MQHDVKALVIACNTIAAVAGAKVRQTAGGMPVLDVIAAGAQAALATSRNGRIGIIATSTT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH+ Q + + +L VEE ++ +++ ++ E Sbjct: 127 VNSNAYARAIHAQNPQARVPSQACPLLVPLVEEGWLEHEVTRLTVREYLKPLLAE----D 182 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250 D +VL CTHYPL+ + + +P + +D++ + A L ++ D+ Sbjct: 183 IDTLVLGCTHYPLLKPLLQSEAP-HLALVDSALTTAEATAAALAEAGLLNPSQTPADYHF 241 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S P + G Sbjct: 242 YVSDIPLRFQTIGERFLG 259 >gi|84394314|ref|ZP_00993037.1| glutamate racemase [Vibrio splendidus 12B01] gi|84375044|gb|EAP91968.1| glutamate racemase [Vibrio splendidus 12B01] Length = 276 Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 137/262 (52%), Gaps = 11/262 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 LQ +IL+FDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ + + Sbjct: 15 LQKNILVFDSGVGGLSVYKEISQLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSIVTSF 74 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + + VIACNTA T++ LR+ S+ +G VPAIK A+ + + +++TPAT Sbjct: 75 VASHAIDIVVIACNTASTIVLPTLRAN-NSIPIVGVVPAIKPASLL-ANKAVGLIATPAT 132 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI ++ S + L+ S L E+ G I +E+++ ++ Sbjct: 133 ITREYTHELIKNFSSNKRVELLGSTRLVDMAEDKLRGEAINLEELQQILQPMI-----NT 187 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV VL CTH+PLI +Q+ V +D+ +IA+R + LL R +F Sbjct: 188 IDVAVLGCTHFPLIKSEIQQVLGKSVLLVDSGKAIAKRVQDLLDL--ESGNREGGVREVF 245 Query: 252 LSGKP--DIAMRRLMQGFGLKS 271 S P + A+ ++ G S Sbjct: 246 CSALPKKESALNSTLKQLGFSS 267 >gi|149912317|ref|ZP_01900882.1| glutamate racemase [Moritella sp. PE36] gi|149804604|gb|EDM64670.1| glutamate racemase [Moritella sp. PE36] Length = 262 Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 3/257 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + ILIFDSG+GG+ + + ++ +P ++Y+ D+ FPYG + L R+ L + + Sbjct: 2 SKILIFDSGVGGISIYKAIKEQLPNADYLYLFDNKYFPYGELDPEFLIDRVCQLIGYMCE 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + P L VIACN+A TL+ LR F S+ F+G VPAIK AA ++ I +L+TP T+ Sbjct: 62 NHSPDLVVIACNSASTLVLPALRKRF-SIPFVGVVPAIKPAALQSKKKKIGLLATPGTVS 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT L++ + C I ++ + L + E G + D I + + D Sbjct: 121 REYTQLLVNEHAQDCEIDMIGTTSLVLQAENKLYGHPVDLDAINNVVSKWSDPQNS--PD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 V+VL CTH+PL+V + ++D+ +IA R + +L NT + Sbjct: 179 VVVLGCTHFPLLVTELEASLGEHIQFIDSGMAIALRVKDILGEKNTVLNTCNIGQSFCTK 238 Query: 254 GKPDIAMRRLMQGFGLK 270 + + L GL Sbjct: 239 IQAQKKLTLLFNRIGLS 255 >gi|323465948|gb|ADX69635.1| Glutamate racemase [Lactobacillus helveticus H10] Length = 267 Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 15/267 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GG V++K+ +P +++ D PYG+ + + Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVKKVIEKLPHESTVFIGDSANMPYGDKSREQIIE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L K L + ACNTA + L++ AA T++ Sbjct: 53 LTRRSVKFLLQKK-VKLIIFACNTATAVAMPTLQNEVEQQIIGVIQSGSLAAARTTKNKK 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +++ +TP T+ I + V++ LA +E D ++ Sbjct: 112 VAVAATPVTINSHAYQKEIKFRDPDIKVMEVAAPELAPLIESQK-----DYDTNLAAVKR 166 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + + D VL CTHYPLI + F + + +D +D +A+ ++ R + Sbjct: 167 SIAPLKDQDFDTFVLGCTHYPLIQNEFAEALGDKIQIVDPADQVAQYTFNVMRRDGLFSS 226 Query: 243 -RVFDDHALFLSGKPDIAMRRLMQGFG 268 H + +G PD + G Sbjct: 227 FDQAGKHEYYTTGDPDKFSEMERRFLG 253 >gi|320335009|ref|YP_004171720.1| glutamate racemase [Deinococcus maricopensis DSM 21211] gi|319756298|gb|ADV68055.1| Glutamate racemase [Deinococcus maricopensis DSM 21211] Length = 279 Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 10/254 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + I +FDSG+GGL VL +R +P ++Y+AD PYG D ++ Sbjct: 4 ADPHPHAPIGVFDSGVGGLSVLAALRRELPNEDYLYLADTAHVPYGPRADDDIRDLTGRA 63 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISIL 126 + D + V+ACNTA LR+ +G VPA+K A A T+SG+I +L Sbjct: 64 ARWLFD-HGAKSVVVACNTASAFSLAPLRAWAGDARPVVGLVPAVKPAVAATRSGVIGVL 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSS--MILASRVEEYACGIKIKEDEIKKEIEGCF 184 +TPATLR +++ + + + +V + L VE +++ ++ Sbjct: 123 ATPATLRGALLQDVVAQHATPRGVRVVPCADLRLVPLVESGLADAPETLAALRETLD--- 179 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--T 242 G D +VL CTHYP + R L + D+ +ARR R +L + T Sbjct: 180 -PVVGAGADALVLGCTHYPFLTSALRHLYGPDLALFDSGAGVARRTRAVLAERGLLRAPT 238 Query: 243 RVFDDHALFLSGKP 256 F +G P Sbjct: 239 GTPGTVRAFTTGDP 252 >gi|167626058|ref|YP_001676352.1| glutamate racemase [Shewanella halifaxensis HAW-EB4] gi|189030370|sp|B0TMV5|MURI_SHEHH RecName: Full=Glutamate racemase gi|167356080|gb|ABZ78693.1| glutamate racemase [Shewanella halifaxensis HAW-EB4] Length = 266 Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 84/259 (32%), Positives = 135/259 (52%), Gaps = 8/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I+IFDSGIGGL + +++ ++P+ + Y+ D+ PYG E+ L K + L + Sbjct: 1 MSGPIVIFDSGIGGLSIFDEIKKVLPDQGYCYLFDNARLPYGELEESVLIKGCVDLICEQ 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + VL V+ACN+A TL+ LR+ S+ +G VPAIK AA +++ I +L+T T Sbjct: 61 VKRIDAVLVVVACNSASTLVLPGLRARL-SIPIVGVVPAIKPAAQISKTRHIGLLATHGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R+YT LI + C + L S L E G K+ D IK +E + Sbjct: 120 IKRSYTRELIKEFAGDCKVDLFGSSELVMLAEAKLAGEKL--DLIK--LESQLKPIQHSD 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HAL 250 D +VL CTH+P+I +Q+ V LD+ +IA+R LL I + A+ Sbjct: 176 LDTLVLGCTHFPIIADEIQQVLGAGVKLLDSGKAIAQRVSYLLENIEDKLDNSAGELMAI 235 Query: 251 FLSGK--PDIAMRRLMQGF 267 + + + P +A R +GF Sbjct: 236 YTTEEITPGLATRLAEKGF 254 >gi|332288965|ref|YP_004419817.1| glutamate racemase [Gallibacterium anatis UMN179] gi|330431861|gb|AEC16920.1| glutamate racemase [Gallibacterium anatis UMN179] Length = 262 Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 135/261 (51%), Gaps = 11/261 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +IL FDSG+GGL V ++++ L+P YH++Y D+ FPY L++R + + I Sbjct: 4 NPTILFFDSGVGGLSVYREVKALLPNYHYLYCLDNACFPYSEKPGKLLEQRCVEICQKIA 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 Q L VIACNTA T++ +R+ F + +G VPAIK AA TQ+ +I +L+T T+ Sbjct: 64 TNQQIDLIVIACNTASTIVLPAMRAAF-NCPIVGTVPAIKPAAEKTQTKVIGLLATKGTI 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R Y +LI Y C + + S L E+ G KI I + + E E Sbjct: 123 TRPYVDDLIQQYAKNCEVKRLGSTELVEIAEQKLHGKKIDHLAIMRAVAEWRYEYEM--- 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL-F 251 D +VL CTH+PL+ + P ++D+ +IARR + LL QT +D + + Sbjct: 180 DTVVLGCTHFPLLKSELKACLPQVSFFIDSGKAIARRVQSLL----LSQTTTSNDKQIAY 235 Query: 252 LSGKPDIA--MRRLMQGFGLK 270 + D A ++++ +G K Sbjct: 236 CTAPFDDANDVKKMFCDWGFK 256 >gi|293610177|ref|ZP_06692478.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827409|gb|EFF85773.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 288 Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 12/266 (4%) Query: 7 PCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K I IFDSGIGG+ V ++ +P +Y AD PYG D +++ Sbjct: 13 PMPKASADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124 D L + ++V+ACNTA D LR + +G VPA+K A T+S +++ Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+TPAT R +++ + + + ++S+ L VE + K ++ Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMG----EACLKALKE 187 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYP + L +D+ ++AR+ +L + Sbjct: 188 VLQPAAEQGADYLVLGCTHYPFLNQAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCD 247 Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265 ++ + A ++SG A++ ++Q Sbjct: 248 QIGQNVARIECYVSGNNAEALQPVLQ 273 >gi|119899045|ref|YP_934258.1| glutamate racemase [Azoarcus sp. BH72] gi|119671458|emb|CAL95371.1| glutamate racemase [Azoarcus sp. BH72] Length = 271 Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 107/263 (40%), Gaps = 7/263 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + SI +FDSGIGGL V++ + +P + IY D PYG +++ + Sbjct: 3 ADARASRSIGVFDSGIGGLTVVRALMERLPFENIIYFGDTARVPYGVKSVATIEQFTAQI 62 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126 +L + + ++ACNT + + + + L + + A A + G I ++ Sbjct: 63 TDFLL-QQDVKMLIVACNTMAAVAAHIVAARAGGIPVLDVIEAGARAAVAASPGGRIGVI 121 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 TP T+ + IH + ++ + + VEE + ++ + E Sbjct: 122 GTPTTVNSNAYARRIHELDAGARVYSQACPLFVPLVEEGWLDHPVTRMTAQEYLRPVLAE 181 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D +VL CTHYPL+ + R ++ V +D++ + A A L Q Sbjct: 182 ----EVDSLVLGCTHYPLLKPLLRDVAGPGVKLIDSALTTAELAAERLNDCGLAQGGSAP 237 Query: 247 -DHALFLSGKPDIAMRRLMQGFG 268 ++ +++ P + G Sbjct: 238 ANYRYYVTDVPLRFQTIGERFLG 260 >gi|301062755|ref|ZP_07203367.1| glutamate racemase [delta proteobacterium NaphS2] gi|300443162|gb|EFK07315.1| glutamate racemase [delta proteobacterium NaphS2] Length = 272 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 13/249 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +L +PEY ++Y+ D PYGN + + K Sbjct: 2 IGVFDSGFGGLTILGAFLKSLPEYDYLYLGDSARTPYGNKSQEVIYNYTRQAVRFLFSKG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-----PSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 VL ++ACNTA T +++ + P+ LG +P + A A T+ G I ++ T Sbjct: 62 -CVLIILACNTASTKALRKIQQEWLPENHPNRRVLGVVIPLAESAVASTRYGRIGVIGTQ 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ I I + +L VEE G +KK + + Sbjct: 121 ATIDSRVYEEEIRKLNPGVKIFTQACPLLVPLVEEGWVGKPESNMILKKYLSR----LKR 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248 K+ D ++L CTHY + ++ L+ + IA + + L R +TR+ D+ Sbjct: 177 KQIDTLILGCTHYSFLEKDIARIMGKNCRVLNGPEIIAAKLKDYLNRHPEIETRIPDNRN 236 Query: 249 -ALFLSGKP 256 A + P Sbjct: 237 LACCTTDDP 245 >gi|297571671|ref|YP_003697445.1| glutamate racemase [Arcanobacterium haemolyticum DSM 20595] gi|296932018|gb|ADH92826.1| glutamate racemase [Arcanobacterium haemolyticum DSM 20595] Length = 282 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 105/264 (39%), Gaps = 12/264 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + I +FDSGIGGL V + + +P YV D PYG +++ + + Sbjct: 5 RNDAPIGVFDSGIGGLTVARAIIDQLPYESITYVGDTANCPYGPRPIAHVRELALNVMDH 64 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISIL 126 ++ + VIACN+A + + + R + + + + PA + A T++ I ++ Sbjct: 65 LVSTG-VKMLVIACNSASSAVLHDARERYTKQLGIPVVEVIRPAARAALHATRNNKIGVI 123 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT++ + + + V ++ S+ E D + K Sbjct: 124 ATQATIQSGAYDDAL-AVVPDVNVFSASAPRFVEFAEAGIT----TGDLVLKTAREYLEP 178 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D +VL CTHYP + V + V + +++ A+ L N ++ Sbjct: 179 IKESGVDTLVLGCTHYPFLSGVIGYVMGEGVLLVSSAEETAKDVYRALTEENLLRSSESG 238 Query: 247 D--HALFLSGKPDIAMRRLMQGFG 268 ++ ++G+ + G Sbjct: 239 APLYSFNVTGESGSFETLARRFIG 262 >gi|257468044|ref|ZP_05632140.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|317062330|ref|ZP_07926815.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|313688006|gb|EFS24841.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] Length = 263 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 104/263 (39%), Gaps = 13/263 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K +I +FDSG+GG VL+++ L+P + IY D+ PYG ++ + + Sbjct: 2 KKNYNIGVFDSGVGGTTVLKRIIELLPNENIIYYGDNGNAPYGEKTIKEIQGFCLDIMDF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 + VIACNTA + ++ + ++ +G + P K A + + I +LSTP Sbjct: 62 FMM-NNCKAVVIACNTATAASLELIKEKY-TVPVIGVISPGAKSAVEASTNKCIGVLSTP 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T ++ I Y ++ L +E + +E IK I K Sbjct: 120 FTAASNAYADEIAKYSKTAKVYQEGCPELCPMIEAGWETFEDRETIIKNHI-----SKFP 174 Query: 190 KRTDVIVLACTHYPLIVHVF-RQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDD 247 + D +VL CTHYP+ R +D + + L N + Sbjct: 175 RNVDTVVLGCTHYPIAREDIARNFCGN---IVDPARETSVALYNTLKNSNLLSDSDTKGK 231 Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270 F+SG D + Q G + Sbjct: 232 IDFFVSGDKDKFRKVAEQFLGFE 254 >gi|225351503|ref|ZP_03742526.1| hypothetical protein BIFPSEUDO_03099 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157847|gb|EEG71130.1| hypothetical protein BIFPSEUDO_03099 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 271 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ V +++R MP +Y D PYG ++K + ++ Sbjct: 18 APIGVFDSGLGGISVAREIRRDMPNERVLYFGDSANAPYGTKSPEQVRKLSDAIVKRFVE 77 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPAT 131 + VIACNTA + +ELR + + +G PA+K A + + +TP T Sbjct: 78 QG-VKAVVIACNTATSAAANELRDKY-DIPIIGMEPALKVACDRGHGNRQRVIVAATPLT 135 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 LR + L+ + + I L VE D + + F + + Sbjct: 136 LRERKFAVLMDRFKTDHTIFPEPCPGLVEIVEHGQLD---DHDVVMHTLHQYFDQYDLST 192 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+ FR+L P +D ++ R +L + D Sbjct: 193 IDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLSPEDADGGIEL 252 Query: 252 LSGKPDIAMRRLMQGF 267 + + +L Q Sbjct: 253 ANSDTSTQIAQLAQSL 268 >gi|229114438|ref|ZP_04243856.1| Glutamate racemase [Bacillus cereus Rock1-3] gi|228669117|gb|EEL24541.1| Glutamate racemase [Bacillus cereus Rock1-3] Length = 275 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 103/259 (39%), Gaps = 7/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 ++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +H + +H + LA+ E + ++++ + + Sbjct: 125 IQSNMYEKALHELDTYLEVHSHACPTLATVAENQLE----DTAYVTQQVKQALLPLTKED 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ ++ V + +++ A +L + H F Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G G + Sbjct: 241 TTGSVLSFEHIAELWLGYE 259 >gi|164687228|ref|ZP_02211256.1| hypothetical protein CLOBAR_00869 [Clostridium bartlettii DSM 16795] gi|164603652|gb|EDQ97117.1| hypothetical protein CLOBAR_00869 [Clostridium bartlettii DSM 16795] Length = 258 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 10/243 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN + +I +FDSG+GG+ VL+ ++ LMP FIY D PYG + K Sbjct: 1 MDN------SKKAIGVFDSGLGGISVLRDLKKLMPNEDFIYFGDSAYAPYGIKTKDEITK 54 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + + ++K VIACNTA + + LR + + +G PA+K A ++ Sbjct: 55 RCVEIIDFFIEKG-VKAVVIACNTATSASANYLRKKYKDLPIIGMEPALKVATQGVKNNN 113 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +++TP TL+ L+H + + + L VE E + +++ Sbjct: 114 IVVMATPLTLKEKKFETLMHKFRGNNKVVKMPCPKLVEIVENDLLD---DETTVVNQLKD 170 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTH+ + P +D + + + +L + + Sbjct: 171 YYKNVNVDNLDSVVLGCTHFIFYKDYLNEFLPETAHLVDGNMGTCKHVKEILEQKHELNE 230 Query: 243 RVF 245 Sbjct: 231 ENH 233 >gi|255530901|ref|YP_003091273.1| glutamate racemase [Pedobacter heparinus DSM 2366] gi|255343885|gb|ACU03211.1| glutamate racemase [Pedobacter heparinus DSM 2366] Length = 279 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 11/264 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 SI +FDSG GGL V + + +P+Y++IY D+ PYG+ + + + + Sbjct: 4 NQSIGVFDSGYGGLTVFKSIASKLPQYNYIYFGDNARTPYGDHSFETIYQYTLECVEWLF 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRS-----TFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 + P L ++ACNTA ++ +P LG + P + +T S + ++ Sbjct: 64 AQGCP-LVILACNTASAKALRNIQQNVLPFKYPDRRVLGVIRPTAEIVGDFTLSKHVGVM 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ I+ + + + S + +E + +KK I+ Sbjct: 123 GTRGTVNSESYLMEINKFFPEISVSQQSCPMWVPLIENNEHIAAGADYFVKKYIDELLA- 181 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + + D IVLACTHYPL+V + + P ++ L D +A L R+ Sbjct: 182 -KDNQIDCIVLACTHYPLLVPKIKTILPDHINLLGQDDIVADSLALYLENHPEMTDRIAR 240 Query: 247 DHA--LFLSGKPDIAMRRLMQGFG 268 ++ F SG + + FG Sbjct: 241 ENKTIFFTSGDAQVFDTQASVFFG 264 >gi|324997298|ref|ZP_08118410.1| glutamate racemase [Pseudonocardia sp. P1] Length = 283 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 9/262 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E+ + I IFDSG+GGL V + + L+P +YV D PYG +++ + + Sbjct: 3 SERGIDAPIGIFDSGVGGLTVARSVIDLLPAEQIVYVGDTAHSPYGPRTIADIRRLALQI 62 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++++ L VIACN+A + R +P PA+++A A T++G I ++ Sbjct: 63 GDELVESGVKAL-VIACNSASAACLADFRERYPVPVVEVVRPAVRRAVAATRNGRIGVIG 121 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ ++ + I V+ VE ++ EG Sbjct: 122 TQATIASGAYADAFDA-ARDTEITSVACPRFVDFVERG----TTSGRQVLGVAEGYLEPL 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD- 246 + D +VL CTHYPL+ V + V + ++D AR L + + Sbjct: 177 QRAGVDTVVLGCTHYPLLTGVLEIVLGPDVTLVSSADETARTLVRTLHTRDLLRDDTAPA 236 Query: 247 -DHALFLSGKPDIAMRRLMQGF 267 H +G P+ RRL + F Sbjct: 237 AAHRFLATGDPEPF-RRLGRRF 257 >gi|323495305|ref|ZP_08100385.1| glutamate racemase [Vibrio brasiliensis LMG 20546] gi|323310440|gb|EGA63624.1| glutamate racemase [Vibrio brasiliensis LMG 20546] Length = 264 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 137/264 (51%), Gaps = 11/264 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K ILIFDSG+GGL V ++++ +P+ ++Y+ D+ +PYG + L R+ + Sbjct: 1 MTKKTAKILIFDSGVGGLSVYKEIQAQLPQLDYLYIFDNEAYPYGELDHDTLIARVDTIV 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S ++ ++Q L VIACNTA T++ LR+ S+ +G VPAIK A+ + + +++T Sbjct: 61 SSLVAQHQIDLVVIACNTASTIVLPTLRAKL-SVPVVGVVPAIKPASNL-ANKAVGLIAT 118 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 PAT+ R YT +LI + + L+ S L EE G + +E+K + Sbjct: 119 PATITRPYTHDLIRDFSQSKPVELLGSTRLVDIAEEKLRGKAVDLEELKNILAP-----M 173 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 + DV VL CTH+PLI + + V +D+ ++IARR + LL +T+ Sbjct: 174 ESKIDVAVLGCTHFPLIREEIQAVLTNHVQLVDSGEAIARRVKDLLVIEADAETQ--GKR 231 Query: 249 ALFLSGKP--DIAMRRLMQGFGLK 270 ++ S P + A+ + + G Sbjct: 232 EIYSSAPPWEEGALNQALYLLGFS 255 >gi|255524010|ref|ZP_05390972.1| glutamate racemase [Clostridium carboxidivorans P7] gi|255512297|gb|EET88575.1| glutamate racemase [Clostridium carboxidivorans P7] Length = 257 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 7/250 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I FDSG+GG+ VL++ L+P F+Y D PYG RL F + L Sbjct: 4 RPIGFFDSGVGGISVLKEAVKLLPGEDFVYFGDSNNAPYGIKTVEE-ASRLTFEAVEFLI 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSM-AFLGAVPAIKQAAAYTQSGLISILSTPATL 132 VIACNTA + +LR + S+ +G PA+K A + G I +++TP TL Sbjct: 63 SKNIKAVVIACNTATSAAIIDLRKKYSSVMPVIGIEPALKPAVELKRKGQIVVMATPMTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL++ Y +Q ++ + L +E+ ++ +E++K + + + Sbjct: 123 AERKFNNLMNRYKNQAQMYPMPCPGLVELIEQGM----VEGEEVEKYLRDKIEPLKEEGI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251 IVL CTHYP I +L V +D S ++ + L + N + R ++ Sbjct: 179 AAIVLGCTHYPFIKKTLSKLLNNEVPIIDGSLGTVKQLKRELIKSNLASKKREGGKVTVY 238 Query: 252 LSGKPDIAMR 261 S D ++ Sbjct: 239 NSLDSDEIIK 248 >gi|239815499|ref|YP_002944409.1| glutamate racemase [Variovorax paradoxus S110] gi|239802076|gb|ACS19143.1| glutamate racemase [Variovorax paradoxus S110] Length = 269 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 1/256 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + + +FDSG+GGL VL +R +P F+Y AD PYG D + +R + + Sbjct: 1 MNHPVGVFDSGVGGLSVLAALRAELPHERFVYFADTAFAPYGERGDAYVIERSRKVAEQL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + ++ V+ACNTA T LR+ P++ +G PA+K A A +++G I++++T T Sbjct: 61 MAEHGIKALVVACNTATTAAIHLLRAEHPALPIVGLEPALKPAVATSRTGHIAVMATRGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L + L S+ ++ V L +E + I E + E + + Sbjct: 121 LASAKYAALRDSFAGTANVRAVPCDGLVKAIEGFDTAA-ITELCARYMAEAGPLGDGPGQ 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHYPL+ + ++ +P + ++D +A++AR +L + L Sbjct: 180 VDTVVLGCTHYPLVKNELQRHAPPALRFIDTGAPVAQQARRVLASLGRLAPSGEGGLVLQ 239 Query: 252 LSGKPDIAMRRLMQGF 267 SG + Sbjct: 240 GSGDAAVLEAAAAHWL 255 >gi|160888040|ref|ZP_02069043.1| hypothetical protein BACUNI_00448 [Bacteroides uniformis ATCC 8492] gi|156862539|gb|EDO55970.1| hypothetical protein BACUNI_00448 [Bacteroides uniformis ATCC 8492] Length = 279 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 10/261 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGIFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P LG + P ++ TQS + +L+ Sbjct: 70 -MGCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ +H + + + S VE + + I+K I Sbjct: 129 TAGTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNIGNLLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246 + + D ++L CTH+PL++ +Q P + + + +A + L R + Sbjct: 187 KDTQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVADSLKDYLHRHPEMDKKCTKG 246 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 ++ + + + F Sbjct: 247 GRCVYRTTESEEKFTESASTF 267 >gi|261249246|emb|CBG27108.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 250 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 128/246 (52%), Gaps = 4/246 (1%) Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86 V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y L+VIACNT Sbjct: 2 SVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYPLSLAVIACNT 61 Query: 87 AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146 A T+ LR F + +G VPAIK AA T +G++ +L+T AT++R YT LI + + Sbjct: 62 ASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPYTHELIARFAN 120 Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 +C I ++ S L E G + +E+++ + E D +VL CTH+PL+ Sbjct: 121 ECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVVLGCTHFPLLR 178 Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD-IAMRRLMQ 265 Q+ P +D+ +IARR LL + A ++ P + ++Q Sbjct: 179 DELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQ 238 Query: 266 GFGLKS 271 +G ++ Sbjct: 239 RYGFET 244 >gi|317050732|ref|YP_004111848.1| glutamate racemase [Desulfurispirillum indicum S5] gi|316945816|gb|ADU65292.1| glutamate racemase [Desulfurispirillum indicum S5] Length = 260 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 9/256 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I IFDSG+GG+ VL+ +R +P + +Y+ D PYG + + + D L Sbjct: 2 KTIGIFDSGVGGITVLKAIRRALPTFDILYLGDTARVPYGTKSRETVLRYSLQ-VGDFLY 60 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + L VIACNTA E+R+ + + +G + P + A ++SG I+++ T AT+ Sbjct: 61 RKGIDLLVIACNTATAYGLHEIRARY-DIPVIGVIEPGAQATVALSRSGRIAVIGTSATV 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + I Y+ + ++ +L VEE CG + +++ + + + Sbjct: 120 QSGQYRSTIQHYLPDADVREIACPMLVPLVEENWCGTDVAHLILQRYL-----GQLRGQV 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP++ ++ P V +D+++ AR L ++ Sbjct: 175 DTLVLGCTHYPMLKEDIARVLP-GVTQVDSAEETARTIVGLTGVPAPGTLGTLGTTTYYM 233 Query: 253 SGKPDIAMRRLMQGFG 268 + G Sbjct: 234 TDTSQRFAEIASSFLG 249 >gi|167578823|ref|ZP_02371697.1| glutamate racemase [Burkholderia thailandensis TXDOH] Length = 290 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 8/241 (3%) Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M + P + ++ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D Sbjct: 1 MTTPHAPDSRVSPARSPIGIFDSGLGGLSVLRAVRERLPDEAIVYVADSRHAPYGPRDDA 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + ++ + L VIACNTA +R P + +G P IK AA ++ Sbjct: 61 FIIERTLAIGEWLVAQGAKAL-VIACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + +L+T ATLR LI + + C + L +E G E++ Sbjct: 119 KTRVAGVLATQATLRSARFEALIARHAADCRFICQAGHGLVEAIERGDTG----SPELRA 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 ++ G D +VL CTHYP + R ++ + +D SD+IAR+ +L Sbjct: 175 QLAGFLEPMLEAGADTLVLGCTHYPFLDAAIRDVTSSRLHLIDTSDAIARQLARILDERG 234 Query: 239 T 239 Sbjct: 235 L 235 >gi|262280802|ref|ZP_06058585.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202] gi|262257702|gb|EEY76437.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202] Length = 288 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 11/260 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I IFDSGIGG+ V ++ +P +Y AD PYG D +++ D Sbjct: 19 ADAPIGIFDSGIGGMSVAAEIARYLPNERIVYYADTAYVPYGPRSDEEIRELTARAV-DW 77 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L + ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPA Sbjct: 78 LYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPA 137 Query: 131 TLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T R +++ + + + ++++ L VE ++ + +K+ ++ Sbjct: 138 TFRGQLIKDVVEKFAIPAGVKVMTLTNLELVPCVEAGQQMGEVCLNALKEVLQ----PAA 193 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 + D +VL CTHYP + L +D+ ++AR+ +L + ++ + Sbjct: 194 EQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNALLCDQIGQNV 253 Query: 249 A---LFLSGKPDIAMRRLMQ 265 A ++SG A++ ++Q Sbjct: 254 ARIECYVSGNNAEALQPVLQ 273 >gi|332300836|ref|YP_004442757.1| Glutamate racemase [Porphyromonas asaccharolytica DSM 20707] gi|332177899|gb|AEE13589.1| Glutamate racemase [Porphyromonas asaccharolytica DSM 20707] Length = 281 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 112/264 (42%), Gaps = 14/264 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++++ I +FDSG GGL +L+K++ +P+Y F+Y+ D+ PYG+ + + Sbjct: 1 MQQIEGPIGVFDSGYGGLTILRKLQEQLPQYDFVYLGDNARSPYGSRSMRVVYQFTREAV 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRST-FPSM-------AFLGAV-PAIKQAAAYTQ 119 + D P L ++ACNTA +++ P + LG + P ++ T Sbjct: 61 ERLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTG 119 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + + IL+T T+ IH + + + VE + ++K Sbjct: 120 TKHVGILATEGTVSSESYVTEIHKLYPDVTVVQEACPLWVPIVETGESDSPGADFFVRKH 179 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 +E + ++ D I+L CTHYP+++ R+L + + + +A+ L R Sbjct: 180 LERLLA--QDEKIDTIILGCTHYPILMPKIRRLLTPTIKVVSQGELVAKSLEEYLVRHPE 237 Query: 240 HQTRVF--DDHALFLSGKPDIAMR 261 ++ + + + + R Sbjct: 238 MAAQLTRGGTTRYYTTEQTERFSR 261 >gi|296186868|ref|ZP_06855269.1| glutamate racemase [Clostridium carboxidivorans P7] gi|296048582|gb|EFG88015.1| glutamate racemase [Clostridium carboxidivorans P7] Length = 259 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 7/250 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I FDSG+GG+ VL++ L+P F+Y D PYG RL F + L Sbjct: 6 RPIGFFDSGVGGISVLKEAVKLLPGEDFVYFGDSNNAPYGIKTVEE-ASRLTFEAVEFLI 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSM-AFLGAVPAIKQAAAYTQSGLISILSTPATL 132 VIACNTA + +LR + S+ +G PA+K A + G I +++TP TL Sbjct: 65 SKNIKAVVIACNTATSAAIIDLRKKYSSVMPVIGIEPALKPAVELKRKGQIVVMATPMTL 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL++ Y +Q ++ + L +E+ ++ +E++K + + + Sbjct: 125 AERKFNNLMNRYKNQAQMYPMPCPGLVELIEQGM----VEGEEVEKYLRDKIEPLKEEGI 180 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251 IVL CTHYP I +L V +D S ++ + L + N + R ++ Sbjct: 181 AAIVLGCTHYPFIKKTLSKLLNNEVPIIDGSLGTVKQLKRELIKSNLASKKREGGKVTVY 240 Query: 252 LSGKPDIAMR 261 S D ++ Sbjct: 241 NSLDSDEIIK 250 >gi|228471185|ref|ZP_04055998.1| glutamate racemase [Porphyromonas uenonis 60-3] gi|228307000|gb|EEK16082.1| glutamate racemase [Porphyromonas uenonis 60-3] Length = 281 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 114/264 (43%), Gaps = 14/264 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++++ I +FDSG GGL +L+K+R +P+Y F+Y+ D+ PYG+ H + + Sbjct: 1 MQQIEGPIGVFDSGYGGLTILRKLREQLPQYDFVYLGDNARSPYGSRSMHVVYQFTREAV 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRST-FPSM-------AFLGAV-PAIKQAAAYTQ 119 + D P L ++ACNTA +++ P + LG + P ++ T Sbjct: 61 EKLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTG 119 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + + IL+T T+ IH + + + VE + ++K Sbjct: 120 TKHVGILATEGTVSSESYVAEIHKLYPDMTVVQEACPLWVPIVETGESDSPGTDFFVRKH 179 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 +E + ++ D I+L CTHYP+++ ++L + + + +A+ L R Sbjct: 180 LERLLA--QDEKIDTIILGCTHYPILMPKIQRLLTPSIKVVAQGELVAKSLEEYLVRHPE 237 Query: 240 HQTRVF--DDHALFLSGKPDIAMR 261 + ++ + + + + R Sbjct: 238 MEAQLTRGGTTRYYTTEQTERFSR 261 >gi|239502810|ref|ZP_04662120.1| putative glutamate racemase [Acinetobacter baumannii AB900] Length = 266 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 6/249 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNNNSPIGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + VIACNT + + +R+ ++ + PA+K A A T S I +L+T Sbjct: 61 SNLVAHGKCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAMTVSKHIEVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E E+K ++ Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247 ++ D I+L CTHYP + + +++ + ++ S+++ A+ R L + ++ + Sbjct: 176 EQKVDTIILGCTHYPFVSDMIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235 Query: 248 HALFLSGKP 256 H ++ S P Sbjct: 236 HIIWTSSDP 244 >gi|91782687|ref|YP_557893.1| glutamate racemase [Burkholderia xenovorans LB400] gi|91686641|gb|ABE29841.1| glutamate racemase [Burkholderia xenovorans LB400] Length = 295 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 9/246 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++ Sbjct: 20 RAPVGIFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLV 79 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNTA +R P + +G P IK AA +++ + +L+T TL Sbjct: 80 -RQGAKALVVACNTATAQSIAMVREKLP-IPLVGVEPGIKPAALQSKTRVAGVLATQVTL 137 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ Y + C L VE + E++ + G Sbjct: 138 RSARFQALLERYAADCRFLCQPGHGLVQAVER----CDVGSAELRALLRGYLQPMLDAGA 193 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--- 249 D +VL CTHYP + R++ + +D S +IAR+ +L + A Sbjct: 194 DTLVLGCTHYPFLDTAIREIVGDRLALIDTSVAIARQLERVLDQHGLRAAPESAGTALPR 253 Query: 250 LFLSGK 255 + +G Sbjct: 254 FYSTGD 259 >gi|134283052|ref|ZP_01769754.1| glutamate racemase [Burkholderia pseudomallei 305] gi|237509359|ref|ZP_04522074.1| glutamate racemase [Burkholderia pseudomallei MSHR346] gi|134245700|gb|EBA45792.1| glutamate racemase [Burkholderia pseudomallei 305] gi|235001564|gb|EEP50988.1| glutamate racemase [Burkholderia pseudomallei MSHR346] Length = 290 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 11/276 (3%) Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + ++ + L V+ACNTA +R P + +G P IK AA ++ Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + +L+T ATLR L+ + + C L +E G ++ Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D +VL CTHYP + R ++ + +D D+IAR+ +L Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 R + GL + Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270 >gi|317478578|ref|ZP_07937735.1| Asp/Glu/Hydantoin racemase [Bacteroides sp. 4_1_36] gi|316905219|gb|EFV27016.1| Asp/Glu/Hydantoin racemase [Bacteroides sp. 4_1_36] Length = 279 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 10/261 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGIFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P LG + P ++ TQS + +L+ Sbjct: 70 -MGCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ +H + + + S VE + + I+K I Sbjct: 129 TAGTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNIGNLLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246 + + D ++L CTH+PL++ +Q P + + + +A + L R + Sbjct: 187 KDTQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVADSLKDYLHRHPEMDRKCTKG 246 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 ++ + + + F Sbjct: 247 GRCVYRTTESEEKFTESASTF 267 >gi|297242787|ref|ZP_06926725.1| glutamate racemase [Gardnerella vaginalis AMD] gi|296888998|gb|EFH27732.1| glutamate racemase [Gardnerella vaginalis AMD] Length = 257 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 7/258 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L +I +FDSG+GG+ V +++ +P +Y D PYG +KK + Sbjct: 3 LSAAIGVFDSGLGGISVARQLHAALPHERIVYFGDSANAPYGIKTPEEVKKLSFAIVEHF 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTP 129 + + VIACNTA + ++LR+ + ++ +G PA+K A + S + + +TP Sbjct: 63 V-RLNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGESQRVIVAATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TLR ++L+ + I L VE D + + F E + Sbjct: 121 LTLRERKFADLLQRFSQNNTIFSQPCPDLVRIVERGELN---DRDVVFAALHKYFDEYDL 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D +VL CTH+ FR+ P + +D ++ R +L N + + Sbjct: 178 DSIDSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKILELNNELASDSQEGSI 237 Query: 250 LFLSGKPDIAMRRLMQGF 267 + + M++L + Sbjct: 238 TLTNSDTSLRMQQLAKSL 255 >gi|261415102|ref|YP_003248785.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371558|gb|ACX74303.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327044|gb|ADL26245.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 269 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 10/262 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL +LQK+R +P+Y ++Y+ D+ PYG+ + + + ++ + Sbjct: 2 IGVFDSGFGGLTILQKLRHTLPQYDYLYLGDNARAPYGSRSFETIYRYTLQSVRELFHRG 61 Query: 76 QPVLSVIACNTAFTLIKDELRS-----TFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 P L ++ACNTA ++ FP LG V P ++ ++++G I I +T Sbjct: 62 CP-LVILACNTASAKALRSIQQQVLPVEFPDRRVLGIVRPTAEEIGNFSKTGHIGIFATA 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ I + + + + VE G + +KK+++ Sbjct: 121 GTVSSNSYVLEISHFFPNLKVTQHACPMWVPLVEYGERGTEGARFFVKKDVDQLLAA--D 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++LACTHYPL+ R P V + D +A + L R + R+ + Sbjct: 179 PEIDTVLLACTHYPLLEDEIRAALPPHVRLVVQGDIVADKTLDYLKRHVDMENRLSKGGS 238 Query: 250 L-FLSGKPDIAMRRLMQGFGLK 270 + +L+ ++ FG++ Sbjct: 239 VHYLTTDTAEFFKKGAFRFGME 260 >gi|325068394|ref|ZP_08127067.1| glutamate racemase [Actinomyces oris K20] Length = 287 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 105/257 (40%), Gaps = 12/257 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P+ +Y+ D PYG + ++ + + +++D+ Sbjct: 1 MFDSGVGGLTVARSVLDQLPQEQVLYIGDTANSPYGPRDIAEVRSLALGIMDELVDRG-V 59 Query: 78 VLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA + + R + + + + PA + AA T++G + +++T T+ Sbjct: 60 KLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGTVD 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + V + + E E+ E + D Sbjct: 120 SRAYDDALQA-VPGVELVSQACPRFVELAERGVT----TGPEVLDVAEEYLAPIKAAGVD 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251 ++L CTHYPL+V + V + +SD A+ L N + + H Sbjct: 175 TLILGCTHYPLLVGPISYVMGRDVTLVTSSDETAKDVYRALAGKNLLRGPDAPEPHHDFA 234 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P+ + G Sbjct: 235 STGDPEAFSVLARRFLG 251 >gi|134296381|ref|YP_001120116.1| glutamate racemase [Burkholderia vietnamiensis G4] gi|134139538|gb|ABO55281.1| glutamate racemase [Burkholderia vietnamiensis G4] Length = 286 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 7/255 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + I IFDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + + Sbjct: 12 RPTAPIGIFDSGLGGLSVLRAVRAQLPGESFVYVADSRHAPYGPRDEAFITERTLAIC-E 70 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L + V+ACNTA +R S+ +G P IK AAA + +G+ +L+T + Sbjct: 71 WLARDGAKALVVACNTATARAIAAVRERL-SIPLVGVEPGIKPAAAVSATGVAGVLATQS 129 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL L+ Y + L +E ++ +E Sbjct: 130 TLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALLERYLQPMIDA 185 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTHYP R L + +D SD+IAR+ +L Sbjct: 186 GADTLVLGCTHYPFFTAAIRDLVGDRLTIVDTSDAIARQLARVLDERGLRAPAGAPAAPP 245 Query: 251 -FLSGKPDIAMRRLM 264 F S + +R L Sbjct: 246 RFCSTSDGVQLRALA 260 >gi|52425789|ref|YP_088926.1| glutamate racemase [Mannheimia succiniciproducens MBEL55E] gi|52307841|gb|AAU38341.1| MurI protein [Mannheimia succiniciproducens MBEL55E] Length = 271 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 12/272 (4%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ++ +++ +IL FDSG+GG V ++++ L+P H++Y D+ FPY + + Sbjct: 1 MIMNT-----EIKPTILFFDSGVGGFSVYKEVKQLLPNAHYLYCFDNAFFPYSEKSEEVI 55 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + I ++Y VIACNTA T++ LR F ++ +G VPAIK AA +Q+ Sbjct: 56 IERTLTVCKKINEQYPLDAIVIACNTASTVVLPTLRQHF-AIPIIGTVPAIKPAAEKSQT 114 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L+T T++RTY ++LI Y C + + S LA E G + ++ E+ Sbjct: 115 KHIGLLATKGTVKRTYVTSLIERYAQDCIVEKIGSTKLAEIAERKLHGESVDLIALRNEL 174 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + D ++L CTH+PLI + P + + +IA+R LL I T Sbjct: 175 TPWI---QLSDLDSVILGCTHFPLIKEEIQLCLPQVKFYFEPGTAIAKRVFDLLAGI-TP 230 Query: 241 QTRVFDDHALFLSGKPDIAMRRL--MQGFGLK 270 + + D+ +F + ++ + + ++ +G K Sbjct: 231 KDKTETDNCIFYTKHFELEDKFIQALRFWGFK 262 >gi|218516359|ref|ZP_03513199.1| glutamate racemase [Rhizobium etli 8C-3] Length = 236 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 125/236 (52%), Positives = 171/236 (72%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 MPE FIYVADD GFPYG WE+ ALK+R++ LF +L Y P + +IACNTAFTL+ +L Sbjct: 1 MPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLTDYDPEVCIIACNTAFTLVGADL 60 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 R+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R YT +LI S+ QC++ LV S Sbjct: 61 RAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRAYTRDLIQSFAQQCNVRLVGS 120 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 LA E Y G + +D + EI+ CF+EK+ ++TD++VLACTHYP + ++FR+++PW Sbjct: 121 ENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTDIVVLACTHYPFMANLFRRIAPW 180 Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 PVDWLD +++IARRAR L+P + D A+F SG+ D A RRLMQGFGL++ Sbjct: 181 PVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTSGQQDFATRRLMQGFGLRA 236 >gi|212715492|ref|ZP_03323620.1| hypothetical protein BIFCAT_00389 [Bifidobacterium catenulatum DSM 16992] gi|212661574|gb|EEB22149.1| hypothetical protein BIFCAT_00389 [Bifidobacterium catenulatum DSM 16992] Length = 271 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ V +++R MP +Y D PYG ++K + ++ Sbjct: 18 APIGVFDSGLGGISVAREIRRDMPNERVLYFGDSANAPYGTKSPEQVRKLSDAIVKRFVE 77 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPAT 131 + VIACNTA + +ELR + + +G PA+K A + + +TP T Sbjct: 78 QG-VKAVVIACNTATSAAANELRDKY-DIPIIGMEPALKVACDRGHGNRQRVIVAATPLT 135 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 LR + L+ + + I L VE D + + F + + Sbjct: 136 LRERKFAVLMDRFKTDHTIFPEPCPGLVEIVEHGQLD---DHDVVMHTLHQYFDQYDLST 192 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+ FR+L P +D ++ R +L + + Sbjct: 193 IDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLSPEDAEGGIEL 252 Query: 252 LSGKPDIAMRRLMQGF 267 + + +L Q Sbjct: 253 ANSDTSAQIAQLAQSL 268 >gi|171059222|ref|YP_001791571.1| glutamate racemase [Leptothrix cholodnii SP-6] gi|170776667|gb|ACB34806.1| glutamate racemase [Leptothrix cholodnii SP-6] Length = 272 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 11/272 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + P + +++ I +FDSG+GGL VL+ + L+P +YVAD PYG +++ Sbjct: 1 MPTSPLQHRVR--IGVFDSGLGGLSVLRAIHELLPSATLMYVADSGHAPYGERSVAYVEE 58 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + + + + D+ VL V+ACNTA LR A +G P IK AAA T++G Sbjct: 59 RSLRIAAFLRDQGAQVL-VVACNTATAAAVQALRMHHRDWAIVGVEPGIKPAAAMTRNGR 117 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T TLR L ++ + + L + LA+ +E A + + + ++ Sbjct: 118 IGVLATEGTLRSDRFKLLAQAHAAHVELFLQACPGLAAAIESGA----LTSPAVTERVQT 173 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-LPRI---N 238 C + D +VL CTHYP + + V +D +D++ARR L L + + Sbjct: 174 CCAPLREHQVDTVVLGCTHYPFVANQIAAALGPDVVLIDTADAVARRTLALSLAQAAPDD 233 Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 ++ +G + + Sbjct: 234 DLNQDDRPVTRMWTTGDRLLLANVAERWLTFP 265 >gi|331270559|ref|YP_004397051.1| glutamate racemase [Clostridium botulinum BKT015925] gi|329127109|gb|AEB77054.1| glutamate racemase [Clostridium botulinum BKT015925] Length = 257 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 6/256 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I FDSG+GGL VL++ ++P FIY D PYG + +KK +LD Sbjct: 7 PIGFFDSGVGGLSVLKEAIKILPNEDFIYFGDSKNAPYGTKKVDEVKKLTFDAVKMLLD- 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y V+ACNTA + ++LR+T+ + +G PA+K A +Q G I I++T TL Sbjct: 66 YNVKAIVVACNTATSAAIEDLRNTYKDIPIIGIEPALKPAVELSQDGKIVIMATNMTLAE 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + L+ Y + I + L +E+ ++ E+ + + G + + Sbjct: 126 KKFNKLMSKYKDEYDIVSLPCPGLVEYIEKGI----VQGKELNEFLSGRLSILDKDKIAS 181 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALFLS 253 +VL CTHYP + + V +D S A + + L + N+ ++ + S Sbjct: 182 VVLGCTHYPFVKKELSNILGDEVVIIDGSFGTASQLKRKLIKNNSINKDNKKGKITVLNS 241 Query: 254 GKPDIAMRRLMQGFGL 269 + + ++ + G+ Sbjct: 242 LQDEEIIKISKKLLGI 257 >gi|222837977|gb|EEE76342.1| predicted protein [Populus trichocarpa] Length = 602 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 17/274 (6%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72 + I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ D +++R + + Sbjct: 312 SPIGVFDSGIGGLSVLQALRHELPHERFVYLADSGNAPYGDARGDAFVQQRTRTIARHLR 371 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA D LR+ P + +G PAIK A+ +Q+G + +++T T+ Sbjct: 372 EQHQIKVLVIACNTATAAAVDMLRAEMPELPLIGVEPAIKPASLSSQTGHVGVMATRGTV 431 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-- 190 + L+ + + H+ LA +EE + + D + E+ Sbjct: 432 SSARFARLVAEHGQRVQFHVQPCDGLAKAIEE-STEQPVPADPMATEVAQLCARYVNALG 490 Query: 191 -------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 D +VL CTHY R L + ++D +AR+ R +L R+ T + Sbjct: 491 SFGQKTGEMDSLVLGCTHYIFAREQLRTLLGPDIQFIDTGAPVARQTRRVLDRLGTLASE 550 Query: 244 VFD------DHALFLSGKPDIAMRRLMQGFGLKS 271 L +G + L + Sbjct: 551 SGPLPAAEGQVQLMTTGSLQALQSAASRWLDLPA 584 >gi|150010273|ref|YP_001305016.1| glutamate racemase [Parabacteroides distasonis ATCC 8503] gi|301308360|ref|ZP_07214314.1| glutamate racemase [Bacteroides sp. 20_3] gi|149938697|gb|ABR45394.1| glutamate racemase [Parabacteroides distasonis ATCC 8503] gi|300833830|gb|EFK64446.1| glutamate racemase [Bacteroides sp. 20_3] Length = 276 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 96/259 (37%), Gaps = 11/259 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S + + Sbjct: 7 GPIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSRLFE 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA ++ P+ LG + P ++ +++ I I+ Sbjct: 67 SG-CQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVG 125 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + I + + + VE + +KK I+ Sbjct: 126 TSGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHLLS-- 183 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245 + D ++L CTHYPL++ R P + + +A R L R ++ Sbjct: 184 VDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRKLTKG 243 Query: 246 DDHALFLSGKPDIAMRRLM 264 + + Sbjct: 244 GSCRFLTTESAEKFSEAAS 262 >gi|126458024|ref|YP_001074561.1| glutamate racemase [Burkholderia pseudomallei 1106a] gi|167722449|ref|ZP_02405685.1| glutamate racemase [Burkholderia pseudomallei DM98] gi|167826991|ref|ZP_02458462.1| glutamate racemase [Burkholderia pseudomallei 9] gi|167848505|ref|ZP_02474013.1| glutamate racemase [Burkholderia pseudomallei B7210] gi|167897057|ref|ZP_02484459.1| glutamate racemase [Burkholderia pseudomallei 7894] gi|167905441|ref|ZP_02492646.1| glutamate racemase [Burkholderia pseudomallei NCTC 13177] gi|167913734|ref|ZP_02500825.1| glutamate racemase [Burkholderia pseudomallei 112] gi|167921675|ref|ZP_02508766.1| glutamate racemase [Burkholderia pseudomallei BCC215] gi|217424462|ref|ZP_03455960.1| glutamate racemase [Burkholderia pseudomallei 576] gi|226199169|ref|ZP_03794730.1| glutamate racemase [Burkholderia pseudomallei Pakistan 9] gi|242313204|ref|ZP_04812221.1| glutamate racemase [Burkholderia pseudomallei 1106b] gi|254198957|ref|ZP_04905375.1| glutamate racemase [Burkholderia pseudomallei S13] gi|254296816|ref|ZP_04964270.1| glutamate racemase [Burkholderia pseudomallei 406e] gi|126231792|gb|ABN95205.1| glutamate racemase [Burkholderia pseudomallei 1106a] gi|157806660|gb|EDO83830.1| glutamate racemase [Burkholderia pseudomallei 406e] gi|169657129|gb|EDS88523.1| glutamate racemase [Burkholderia pseudomallei S13] gi|217392386|gb|EEC32410.1| glutamate racemase [Burkholderia pseudomallei 576] gi|225928768|gb|EEH24794.1| glutamate racemase [Burkholderia pseudomallei Pakistan 9] gi|242136443|gb|EES22846.1| glutamate racemase [Burkholderia pseudomallei 1106b] Length = 290 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 11/276 (3%) Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + ++ + L V+ACNTA +R P + +G P IK AA ++ Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + +L+T ATLR L+ + + C L +E G ++ Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D +VL CTHYP + R ++ + +D D+IAR+ +L Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 R + GL + Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270 >gi|320534621|ref|ZP_08035066.1| glutamate racemase [Actinomyces sp. oral taxon 171 str. F0337] gi|320133141|gb|EFW25644.1| glutamate racemase [Actinomyces sp. oral taxon 171 str. F0337] Length = 287 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 12/257 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++D+ Sbjct: 1 MFDSGVGGLTVARSVLDQLPHEQVLYIGDTANGPYGPRDIAEVRSLALSIMDELVDRG-V 59 Query: 78 VLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA + + R + + + + PA + AA T++G + +++T T+ Sbjct: 60 KLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGTVD 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + V + + E E+ E + D Sbjct: 120 SRAYDDALQA-VPGVELVSQACPRFVELAERGVT----TGPEVLDVAEEYLAPIKAAGVD 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251 ++L CTHYPL+V + V + +SD A+ L N + + H Sbjct: 175 TLILGCTHYPLLVGPISYVMGEDVALVTSSDETAKDVYRALAGKNLLRGPDAPEPRHDFA 234 Query: 252 LSGKPDIAMRRLMQGFG 268 +G P+ + G Sbjct: 235 STGDPEAFSVLARRFLG 251 >gi|312885977|ref|ZP_07745605.1| glutamate racemase [Mucilaginibacter paludis DSM 18603] gi|311301514|gb|EFQ78555.1| glutamate racemase [Mucilaginibacter paludis DSM 18603] Length = 276 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 9/239 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG GGL V + + L+P+Y +IY+ D+ PYG+ + + + Sbjct: 6 PIGVFDSGYGGLTVFRSIAKLLPQYDYIYLGDNSRAPYGSRSFKTIHQYTWECVQHLFKM 65 Query: 75 YQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128 P L ++ACNTA +L+ S LG + P + Y+++ I +L T Sbjct: 66 GCP-LVILACNTASAKALRTIQQHDLKKHDSSKRVLGVIRPTAEVIGNYSKTKEIGVLGT 124 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ I ++ +++ + + +E + +K+ ++ + Sbjct: 125 KGTVQSGSYQIEIGNFFPDVNVYQQACPLWVPLIENGEYDKPGADYFVKQYLDQILA--Q 182 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 R D ++LACTHYPL+ R P V + D +A+ L R ++++ + Sbjct: 183 SPRIDTLLLACTHYPLLEQKIRAYLPADVQAVSQGDIVAQSLVNYLQRHPEMESKLTKN 241 >gi|53721405|ref|YP_110390.1| glutamate racemase [Burkholderia pseudomallei K96243] gi|167818613|ref|ZP_02450293.1| glutamate racemase [Burkholderia pseudomallei 91] gi|52211819|emb|CAH37818.1| putative glutamate racemase [Burkholderia pseudomallei K96243] Length = 290 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 11/276 (3%) Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M P + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D Sbjct: 1 MTTPYAPDSPAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + ++ + L V+ACNTA +R P + +G P IK AA ++ Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + +L+T ATLR L+ + + C L +E G ++ Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D +VL CTHYP + R ++ + +D D+IAR+ +L Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 R + GL + Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270 >gi|325518393|gb|EGC98114.1| glutamate racemase [Burkholderia sp. TJI49] Length = 285 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 110/273 (40%), Gaps = 8/273 (2%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M I + + IFDSG+GGL VL+ R +P +YVAD PYG +D + Sbjct: 1 MTIQPAASGARPAAPVGIFDSGLGGLSVLRAARAHLPHESLVYVADTRYNPYGERDDAFI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + + L V+ACNTA +R ++ +G P IK A + S Sbjct: 61 TERTLAIGEWFVQQGAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVQQSAS 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G+ +L+T ATLR L+ + + C L +E G ++ + Sbjct: 119 GVAGVLATQATLRSARFQALLERHGAGCRFICQPGHGLVQAIESGDTG----SPALRALL 174 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + D IVL CTHYP + R + V +D SD+IA + +L + + Sbjct: 175 DSYLRPMLDAGADAIVLGCTHYPFLTATIRDIVGERVTIVDTSDAIALQLARVLDQHDLR 234 Query: 241 QTRVFD--DHALFLSGKPDIAMRRLMQGFGLKS 271 + +G GL + Sbjct: 235 APGGAPVAPPRFYSTGDGRQLQALASTLLGLDA 267 >gi|284009189|emb|CBA76250.1| glutamate racemase [Arsenophonus nasoniae] Length = 279 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 127/243 (52%), Gaps = 3/243 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K + +ILIFDSG+GGL V +++R L+P+ H+IY D+ FPYG + +R++ Sbjct: 14 KTARPTILIFDSGVGGLSVYREVRQLLPDLHYIYAFDNDAFPYGEKSAEFIIERIIRFID 73 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 I K+ +++IACNTA T+ LR+ F +G VPAIK A T++G+I +L+T Sbjct: 74 QIQQKHALAIAIIACNTASTVSLPILRAHF-QFPIIGVVPAIKPATKLTRNGIIGLLATK 132 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ YT LI + C + +++S L E+ G I + + + ++ KE Sbjct: 133 ATVSGNYTRELIDRFAVDCKVEMIASSELVELAEKKLHGQIISTETLVRIVKPWLKMKEP 192 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D IVL CTH+PL+ +++ +D+ +IARRA L+ + A Sbjct: 193 --PDTIVLGCTHFPLLSAELKEVLFDGTRLIDSGAAIARRAVWLINNHPDLILTKNKNIA 250 Query: 250 LFL 252 Sbjct: 251 YCT 253 >gi|227495766|ref|ZP_03926077.1| glutamate racemase [Actinomyces urogenitalis DSM 15434] gi|226834695|gb|EEH67078.1| glutamate racemase [Actinomyces urogenitalis DSM 15434] Length = 288 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 103/262 (39%), Gaps = 12/262 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V + + +P +Y+ D PYG +++ + + +++ Sbjct: 11 DAPIGMFDSGVGGLTVARAVLDQLPGEQVLYIGDTEHSPYGPRPIDEVRELALAVMDELV 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYTQSGLISILST 128 D + VIACNTA + + R + + + + PA + AA T++G I +++T Sbjct: 71 DSG-VKMLVIACNTASAAVLHDARRRYTLGKGVPVVEVIHPAARAAARVTRNGRIGLIAT 129 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ ++ + + V + + E ++ E + Sbjct: 130 QGTVDSRAYADALEA-VPGVELLSTACPDFVELAERGVT----TGPQVMSRAEEYLLPLR 184 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD- 247 D ++L CTHYPL++ + V + +S+ A+ L + Sbjct: 185 EAGVDTLILGCTHYPLLIGPISYVMGEDVTLVTSSEETAKDVYRGLASQGLLRDPDAPAP 244 Query: 248 -HALFLSGKPDIAMRRLMQGFG 268 H +G P+ + G Sbjct: 245 VHEFRATGDPESFAVLARRFLG 266 >gi|167572233|ref|ZP_02365107.1| glutamate racemase [Burkholderia oklahomensis C6786] Length = 290 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 6/230 (2%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + Sbjct: 12 SPARAPIGIFDSGLGGLSVLRAVRARLPDEALVYVADSRHAPYGPRDDAFIVERTLAI-G 70 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + L V+ACNTA +R P + +G P IK AA ++++ + +L+T Sbjct: 71 EWLAAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQ 129 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ATLR LI + C + L VE G E++ + G Sbjct: 130 ATLRSARFEALIARHADDCRFICQAGHGLVEAVERGDTG----SPELRALLTGYLEPMLA 185 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 D +VL CTHYP + R ++ + +D SD+IAR+ +L Sbjct: 186 AGADTLVLGCTHYPFLDAAIRDVASDRLHLIDTSDAIARQLSRILDERGL 235 >gi|121534586|ref|ZP_01666408.1| glutamate racemase [Thermosinus carboxydivorans Nor1] gi|121306838|gb|EAX47758.1| glutamate racemase [Thermosinus carboxydivorans Nor1] Length = 269 Score = 271 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 7/251 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I + DSGIGGL V++++ LMP+ HFIY D PYG+ + + + ++ Sbjct: 6 PIGVCDSGIGGLTVVKELLELMPDEHFIYFGDTARIPYGDRPPAEILTFMRQILRFFTEQ 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V+ACNT + D FP +G I+ A A ++SG I +++T AT+ Sbjct: 66 K-VKMVVVACNTMTAVGLDMAWREFP-FPVVGVNTGIRSALAASRSGRIGVIATQATVAS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + ++ + L + L +E +++ ++ + D Sbjct: 124 GLHERTAKAIDAKAVVALQACPKLVPLIER----EQLEGPAVEAAVAEYLRPLRDAGVDA 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYP I V + V ++ + A A LL + + S Sbjct: 180 LILGCTHYPFISPVISRYLGPAVTIVNPARETALDAVSLLAEYDL-RGNGPGSVRFCFSA 238 Query: 255 KPDIAMRRLMQ 265 + A R + Sbjct: 239 DLERARRLAAR 249 >gi|219850108|ref|YP_002464541.1| glutamate racemase [Chloroflexus aggregans DSM 9485] gi|219544367|gb|ACL26105.1| glutamate racemase [Chloroflexus aggregans DSM 9485] Length = 266 Score = 271 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 10/253 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+AD PYG ++ R + ++++ Sbjct: 2 IGIFDSGLGGLTVTRAIHERLPTADLLYLADSAYCPYGPRPVEEIRARALACGQWLVEQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA + LRST P + +G P +K A A T+ G +++++T TL Sbjct: 62 A-QIVVVACNTATAAAIEVLRSTLP-VPVVGMEPGVKPAVAATRRGKVAVMATSGTLASD 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI++Y ++ ++ ++ L +VE A I ++ K I I Sbjct: 120 RFRALINAYAAEVEVYALACPDLVEQVEAGA----IADEYTKTLIANHLAAAADADV--I 173 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+P + + R + V +D ++A + + RI R F +G Sbjct: 174 VLGCTHFPPLTPLIRACAGPEVTIIDTGPAVAAQTARIAERIGL--PRGEGTLRCFTTGD 231 Query: 256 PDIAMRRLMQGFG 268 P+ + L+ +G Sbjct: 232 PEAIAQALVHVWG 244 >gi|261249981|ref|ZP_05942558.1| glutamate racemase [Vibrio orientalis CIP 102891] gi|260939485|gb|EEX95470.1| glutamate racemase [Vibrio orientalis CIP 102891] Length = 267 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 136/263 (51%), Gaps = 11/263 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K Q ILIFDSG+GGL V Q+++ +P+ ++Y+ D+ +PYG + L R+ L + Sbjct: 5 SKQQAKILIFDSGVGGLSVYQEIQSKLPQLEYLYIFDNEAYPYGELDHDTLIDRVDRLVT 64 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++ K+ L VIACNTA T++ LR+ ++ +G VPAIK A+ + + +++TP Sbjct: 65 SLVAKHHIDLVVIACNTASTIVLPTLRAKL-TIPVVGVVPAIKPASNL-ANKAVGLIATP 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ R YT +LI + + L+ S L EE G + E+K+ + Sbjct: 123 ATVTRPYTHDLIRDFSQSKPVELLGSTRLVDIAEEKLRGKAVDLAELKQILAA-----IE 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 + DV VL CTH+PLI + + V +D+ ++IARR LL +TR Sbjct: 178 NKVDVAVLGCTHFPLIKQEIQAVLTDRVLLVDSGEAIARRVEDLLETTGKKETR--GKRE 235 Query: 250 LFLSGKP--DIAMRRLMQGFGLK 270 +F + P + A+ + + G Sbjct: 236 IFSTAPPWEEGALNKALHQLGFS 258 >gi|270295594|ref|ZP_06201795.1| glutamate racemase [Bacteroides sp. D20] gi|270274841|gb|EFA20702.1| glutamate racemase [Bacteroides sp. D20] Length = 279 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 10/261 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL +L K+R ++P+Y +IY+ D+ PYG + + + + + + Sbjct: 10 GPIGIFDSGYGGLTILSKIREVLPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L P LG + P ++ TQS + +L+ Sbjct: 70 -MGCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ +H + + + S VE + + I+K I Sbjct: 129 TAGTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNIGNLLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246 + + D ++L CTH+PL++ +Q P + + + +A + L R + Sbjct: 187 KDTQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVADSLKDYLHRHPEMDKKCTKG 246 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 ++ + + + F Sbjct: 247 GRCVYRTTESEEKFTESASTF 267 >gi|167565061|ref|ZP_02357977.1| glutamate racemase [Burkholderia oklahomensis EO147] Length = 290 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 6/230 (2%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + Sbjct: 12 SPARAPIGIFDSGLGGLSVLRAVRARLPDEALVYVADSRHAPYGPRDDAFIVERTLAI-G 70 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + L V+ACNTA +R P + +G P IK AA ++++ + +L+T Sbjct: 71 EWLAAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQ 129 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ATLR T LI + C + L VE G E++ + G Sbjct: 130 ATLRSTRFEALIARHADDCRFICQAGHGLVEAVERGDTG----SPELRALLTGYLEPMLA 185 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 D +VL CTHYP + R ++ + +D SD+IAR+ +L Sbjct: 186 AGADTLVLGCTHYPFLDAAIRDVASDRLHLIDTSDAIARQLSRILDERGL 235 >gi|50086249|ref|YP_047759.1| glutamate racemase [Acinetobacter sp. ADP1] gi|49532225|emb|CAG69937.1| glutamate racemase [Acinetobacter sp. ADP1] Length = 292 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 12/268 (4%) Query: 7 PCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K I IFDSGIGGL + Q++ +P +Y AD PYG DH +++ Sbjct: 13 PMPKATADAPIGIFDSGIGGLSIAQEIANYLPNEQIVYYADTAFVPYGPRPDHEIRQLTA 72 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLIS 124 + L + ++V+ACNTA D LR + S +G VPA+K A +QS +++ Sbjct: 73 RGI-EWLYRQGCKMAVVACNTASAFSLDGLREHYGESFPIVGLVPALKPAVLQSQSKVVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+TPAT R ++I+ + S + V+ + L +E + D +++ Sbjct: 132 VLATPATFRGQLIKDVIYHFALPSGVQVLPVTCLELVPLIEAGQQMSQPCLDLLRQI--- 188 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYP + L + +D+ +AR+ +L + Sbjct: 189 -LTPVIDQGADYLVLGCTHYPFLKDAIHYLFGNRLTLIDSGAPVARQTARILIKHQLLCE 247 Query: 243 RVFDDH---ALFLSGKPDIAMRRLMQGF 267 + H A ++SG+ A +++Q Sbjct: 248 KKRTGHLRIACYVSGQEVEASGKVIQHL 275 >gi|300725872|ref|ZP_07059336.1| glutamate racemase [Prevotella bryantii B14] gi|299776860|gb|EFI73406.1| glutamate racemase [Prevotella bryantii B14] Length = 280 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 99/258 (38%), Gaps = 11/258 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + + Sbjct: 5 PQRPGPIGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYGIRSFDVVYQFTRQAVL 64 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123 + + L ++ CNTA ++ PS LG + P + T S + Sbjct: 65 KMF-QMGCQLVILGCNTASAKALRSIQQRDLPELDPSRRVLGVIRPTAEIIGNLTSSRHV 123 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T++ I + V+ VE + +KK ++ Sbjct: 124 GLLATEGTIKSQSYDIEIKKLFPDIQVSGVACPFWVPLVEYNEMDSPGADYFVKKRVDE- 182 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQ 241 + + K D I+L CTH+PL++ + + + + +A + L R H+ Sbjct: 183 -LMLKDKDIDAIILGCTHFPLLMPKIIKYVSPSIRIISQGEYVADSLKAYLERHPEMEHK 241 Query: 242 TRVFDDHALFLSGKPDIA 259 + + D Sbjct: 242 CTKGGSCHYYTTENADKF 259 >gi|76818560|ref|YP_337086.1| glutamate racemase [Burkholderia pseudomallei 1710b] gi|254187190|ref|ZP_04893704.1| glutamate racemase [Burkholderia pseudomallei Pasteur 52237] gi|76583033|gb|ABA52507.1| glutamate racemase [Burkholderia pseudomallei 1710b] gi|157934872|gb|EDO90542.1| glutamate racemase [Burkholderia pseudomallei Pasteur 52237] Length = 290 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 11/276 (3%) Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M P + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D Sbjct: 1 MTTPYAPDSPAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + ++ + L V+ACNTA +R P + +G P IK AA ++ Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + +L+T ATLR L+ + + C L +E G ++ Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D +VL CTHYP + R ++ + +D D+IAR+ +L Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 R + GL + Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270 >gi|299771738|ref|YP_003733764.1| glutamate racemase [Acinetobacter sp. DR1] gi|298701826|gb|ADI92391.1| glutamate racemase [Acinetobacter sp. DR1] Length = 288 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 12/269 (4%) Query: 4 DNYPCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 D P K I IFDSGIGG+ V ++ +P +Y AD PYG D +++ Sbjct: 10 DLEPMPKASADAPIGIFDSGIGGMSVAAEIARYLPNERIVYYADTAYVPYGPRSDEEIRE 69 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSG 121 D L + ++V+ACNTA D LR + +G VPA+K A T+S Sbjct: 70 LTARAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSK 128 Query: 122 LISILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 ++++L+TPAT R +++ + + + ++S+ L VE + +K+ Sbjct: 129 VVAVLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMGEACLTALKEV 188 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 ++ + D +VL CTHYP + L +D+ ++AR+ +L + Sbjct: 189 LQ----PAAEQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGFAVARQTARILIKNAL 244 Query: 240 HQTRVFDDHA---LFLSGKPDIAMRRLMQ 265 ++ + A ++SG A++ ++Q Sbjct: 245 LCDQIGQNVARIECYVSGNNADALQPVLQ 273 >gi|161506994|ref|YP_001576948.1| glutamate racemase [Lactobacillus helveticus DPC 4571] gi|260102884|ref|ZP_05753121.1| glutamate racemase [Lactobacillus helveticus DSM 20075] gi|172048195|sp|A8YTR6|MURI_LACH4 RecName: Full=Glutamate racemase gi|160347983|gb|ABX26657.1| Glutamate racemase [Lactobacillus helveticus DPC 4571] gi|260083308|gb|EEW67428.1| glutamate racemase [Lactobacillus helveticus DSM 20075] Length = 267 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 15/267 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GG V++K+ +P +++ D PYG+ + + Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVKKVIEKLPHESTVFIGDSANMPYGDKSREQIIE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L K L + ACNTA + L++ AA T++ Sbjct: 53 LTRRSVKFLLQKK-VKLIIFACNTATAVAMPTLQNEVEQQIIGVIQSGSLAAARTTKNKK 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +++ +TP T+ I + V++ LA +E D ++ Sbjct: 112 VAVAATPVTINSHAYQKEIKFRDPDIKVMEVAAPELAPLIESQK-----DYDTNLAAVKR 166 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + + D VL CTHYPLI + F + + +D +D +A+ ++ R + Sbjct: 167 SIAPLKDQDFDTFVLGCTHYPLIQNEFVEALGDKIQIVDPADQVAQYTFNVMRRDGLFSS 226 Query: 243 -RVFDDHALFLSGKPDIAMRRLMQGFG 268 H + +G PD + G Sbjct: 227 FDQAGKHEYYTTGDPDKFSEMGRRFLG 253 >gi|317504610|ref|ZP_07962579.1| glutamate racemase [Prevotella salivae DSM 15606] gi|315664281|gb|EFV03979.1| glutamate racemase [Prevotella salivae DSM 15606] Length = 278 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 11/258 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + + + + Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQAVMKLFE 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ CNTA ++ PS LG + P + TQ+ + +L+ Sbjct: 69 -LGCHLVILGCNTASAKALRSIQQNDLPNITPSRRVLGVIRPTAEVIGTLTQNNHVGLLA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ I + + V+ VE + +KK I+ + + Sbjct: 128 TEGTVKSHSYELEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRIDD--LMR 185 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVF 245 D I+L CTHYP+++ + V + + +A + L R Q Sbjct: 186 RDPAIDTIILGCTHYPILMPKIVKYVAPGVRIIPQGEYVAGSLQSYLSRHLDIEQQITQG 245 Query: 246 DDHALFLSGKPDIAMRRL 263 + P+ + Sbjct: 246 GSCRYLTTENPERFKESV 263 >gi|149369705|ref|ZP_01889557.1| glutamate racemase [unidentified eubacterium SCB49] gi|149357132|gb|EDM45687.1| glutamate racemase [unidentified eubacterium SCB49] Length = 263 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 6/251 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 NSI +FDSG+GG + +++ L+P + +Y+AD + PYGN + + +L+ Sbjct: 5 NSIGLFDSGVGGTSIWKEINALLPFENTLYLADSLNAPYGNKTRDEIIHLSIKNTEFLLN 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K + V+ACNTA T + LR + + +G PA+K AA T++ I IL+T TL Sbjct: 65 K-NCKMIVVACNTATTNAINILREKY-DIPIIGIEPAMKPAALQTKTKSIGILATKGTLS 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + L +E+ KI E+ + + D Sbjct: 123 SNLFHKTAAKFTKDISVIEIIGEGLVPLIEQG----KIHTPELTELLFKYTEPMVAASID 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL C+HYP ++ + P + +D+ ++AR+ R +L T FL+ Sbjct: 179 HLVLGCSHYPYLIPKLLTILPDNITIIDSGAAVARQTRSVLENNGILNTLEEKPTLQFLT 238 Query: 254 GKPDIAMRRLM 264 ++ L+ Sbjct: 239 NSDSATLKMLL 249 >gi|126663124|ref|ZP_01734122.1| glutamate racemase [Flavobacteria bacterium BAL38] gi|126624782|gb|EAZ95472.1| glutamate racemase [Flavobacteria bacterium BAL38] Length = 259 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 8/252 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +N I +FDSGIGG + +++ L+P + IY+AD PYG + +++L Sbjct: 4 ENPIGLFDSGIGGTSIWKEVHSLLPNENTIYLADSKNAPYGLKSKEEIIALSSKN-TELL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + ++ACNTA T ELR+ + + F+G PAIK AA +++ I IL+T TL Sbjct: 63 LNLNCKIIIVACNTATTNAIKELRAKY-DVPFIGIEPAIKPAAIQSKTQKIGILATKGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ + I L +E I E++ ++ K Sbjct: 122 NSELFHISAANH-PEVKIIEQIGHGLVQLIENG----DIDSAEMEDLLKSYLNPMIEKNI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251 D +VL C+HYP ++ +++ P + +D+ +++A++ + +L + T + + Sbjct: 177 DFLVLGCSHYPYLIPQIKKIIPAKIRIIDSGEAVAKQTQNILEQNFLINTSKNKSSQIFY 236 Query: 252 LSGKPDIAMRRL 263 + +P++ L Sbjct: 237 TNSEPEVLKSIL 248 >gi|255012458|ref|ZP_05284584.1| glutamate racemase [Bacteroides sp. 2_1_7] Length = 276 Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 97/263 (36%), Gaps = 11/263 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S Sbjct: 3 PQAPGPIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVS 62 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123 + + L ++ACNTA ++ P+ LG + P ++ +++ I Sbjct: 63 RLFESG-CQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHI 121 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 I+ T T+ + I + + + VE + +KK I+ Sbjct: 122 GIVGTSGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHI 181 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + D ++L CTHYPL++ R P + + +A R L R + Sbjct: 182 LS--VDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRK 239 Query: 244 VF--DDHALFLSGKPDIAMRRLM 264 + + + Sbjct: 240 LTKGGSCRFLTTESAEKFSEAAS 262 >gi|126442693|ref|YP_001061621.1| glutamate racemase [Burkholderia pseudomallei 668] gi|126222184|gb|ABN85689.1| glutamate racemase [Burkholderia pseudomallei 668] Length = 290 Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 11/276 (3%) Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + ++ + L V+ACNTA +R P + +G P IK AA ++ Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + +L+T ATLR L+ + + C L +E G ++ Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRT 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D +VL CTHYP + R ++ + +D D+IAR+ +L Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 R + GL + Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270 >gi|325124352|gb|ADY83875.1| glutamate racemase [Acinetobacter calcoaceticus PHEA-2] Length = 288 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 12/266 (4%) Query: 7 PCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P K I IFDSGIGG+ V ++ +P +Y AD PYG D +++ Sbjct: 13 PMPKASADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124 D L + ++V+ACNTA D LR + +G VPA+K A T+S +++ Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131 Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+TPAT R +++ + + + ++S+ L VE + K ++ Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMG----EACLKALKE 187 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYP + L +D+ ++AR+ +L + Sbjct: 188 VLQPAAEQGADYLVLGCTHYPFLNQAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCD 247 Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265 ++ + A ++SG ++ ++Q Sbjct: 248 QIGQNVARIECYVSGNNAEVLQPVLQ 273 >gi|331695366|ref|YP_004331605.1| glutamate racemase [Pseudonocardia dioxanivorans CB1190] gi|326950055|gb|AEA23752.1| Glutamate racemase [Pseudonocardia dioxanivorans CB1190] Length = 275 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 11/263 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + +P +YV D PYG +++ + + Sbjct: 3 DPDRDAPIGIFDSGVGGLTVARAVIDQLPAERIVYVGDTEHGPYGPLRIPEIRRHALAIG 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +++++ L VIACNTA + R +P +PA+++A A T++G I ++ T Sbjct: 63 DELIERG-VKLLVIACNTASAACLADARERYPVPVVEVVLPAVRRAVAATRNGRIGVIGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ ++ + + V+ VE + +I + + Sbjct: 122 SATITSGAYADAFSA-ARDVSVTSVACPRFVDFVERGVTSGR----QILGIAQSYLEPLQ 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-- 246 R D +VL CTHYPL+ + + + V + ++D A+ L + + D Sbjct: 177 RARVDTVVLGCTHYPLLSGLLQIVLGPEVTLVSSADETAKDVVRTLMAADLLRDPETDPP 236 Query: 247 --DHALFLSGKPDIAMRRLMQGF 267 H +G P+ RRL + F Sbjct: 237 PGPHEFLATGDPEPF-RRLGRRF 258 >gi|260579687|ref|ZP_05847548.1| glutamate racemase [Corynebacterium jeikeium ATCC 43734] gi|258602179|gb|EEW15495.1| glutamate racemase [Corynebacterium jeikeium ATCC 43734] Length = 288 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 9/264 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E+ I +FDSG+GGL V + + +P + +Y+ D PYG+ +++ + + Sbjct: 17 VEQANNAPIGVFDSGVGGLTVARAIVDQLPHENLVYIGDTANSPYGDKPLARVRELSIGI 76 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + ++ + V+ACN+A + + R + +PA+++AAA T++G I ++ Sbjct: 77 ADTLAERG-CKMIVVACNSASSAFIRDARERYSIPVVEVILPAVRRAAAATRNGKIGVIG 135 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ +L + + + VE + ++ E Sbjct: 136 TQATVSSRSYQDLFAAI-PGVEAYAQACPQFVPFVERGMTSGR----QLMGLAENYLAPL 190 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD- 246 + + D +VL CTHYPL+ V + + V +++++ A+ L + Sbjct: 191 KAEGVDTVVLGCTHYPLLAGVVQLVMGEDVTLINSAEETAKTVYRTLAEQDLLADEDPGR 250 Query: 247 --DHALFLSGKPDIAMRRLMQGFG 268 D + +G P + + G Sbjct: 251 AVDLSFESTGDPQRFAKLAGRFLG 274 >gi|323144068|ref|ZP_08078711.1| glutamate racemase [Succinatimonas hippei YIT 12066] gi|322416144|gb|EFY06835.1| glutamate racemase [Succinatimonas hippei YIT 12066] Length = 267 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 132/259 (50%), Gaps = 7/259 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L FDSG+GG V ++ L P + Y+ D+ FPYGN ++ + KR + + + ++ Sbjct: 4 VLFFDSGLGGTSVFSAVKELNPNCSYYYLFDNECFPYGNKDEAFIIKRTDEILEESVRRF 63 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L ++ACNTA T+ +LR + +G VPAIK AA ++S +I +++TP T+RR Sbjct: 64 SVSLIIVACNTASTVALPKLRDRIK-IPIVGVVPAIKPAAIKSKSKIIGLVATPGTIRRA 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT++LI + C + + + L E G + E+ + + K +R D I Sbjct: 123 YTNDLIEKFAKDCKVLKIGTTDLVRLCERKMAGKPVTLTEVAEVFGPWLMLKPEERPDSI 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDDHALFLS 253 VL CTH+PL+ L P V +D+ ++I RR R L L + +++ +HA + + Sbjct: 183 VLGCTHFPLVKDEIGTLFPDAV-LVDSGEAIGRRVRSLISLNQAPSYEEISDGNHAFY-T 240 Query: 254 GKPD--IAMRRLMQGFGLK 270 G + + G K Sbjct: 241 GNLENLSGYENAFKSLGFK 259 >gi|254185304|ref|ZP_04891892.1| glutamate racemase [Burkholderia pseudomallei 1655] gi|184209539|gb|EDU06582.1| glutamate racemase [Burkholderia pseudomallei 1655] Length = 290 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 11/276 (3%) Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + ++ + L V+ACNTA +R P + +G P IK AA ++ Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + +L+T ATLR L+ + + C L +E G ++ Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGRGLVEAIERGDTG----SPALRT 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D +VL CTHYP + R ++ + +D D+IAR+ +L Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 R + GL + Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270 >gi|194334596|ref|YP_002016456.1| glutamate racemase [Prosthecochloris aestuarii DSM 271] gi|229486246|sp|B4S417|MURI_PROA2 RecName: Full=Glutamate racemase gi|194312414|gb|ACF46809.1| glutamate racemase [Prosthecochloris aestuarii DSM 271] Length = 269 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 7/250 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ + IFDSGIGGL V++ M+ ++P IY D PYG+ ++K ++ Sbjct: 5 ESPVGIFDSGIGGLTVVRAMQAMLPAEQIIYFGDTARVPYGSKSQVTIRKYAHEDTLTLM 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 KYQP + +IACNT L D + ST + LG + A + A T +G I ++ T AT Sbjct: 65 -KYQPKMIIIACNTVSALGLDVVESTGKGVTVLGVLKAGAELAVRETLNGRIGVIGTQAT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + I + + + + + EE K E E Sbjct: 124 ICSNAYACEITALAPEIQVFSKACPLFVPLAEEGFINHPAS----KLIAEEYLDELLCCN 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250 D +VL CTHYP++ + ++++ + +D+++++A AR LL T L Sbjct: 180 IDTLVLGCTHYPILKTMIQEITGPDIRIIDSAEAVAAGARTLLADNALLNTATTTRTPHL 239 Query: 251 FLSGKPDIAM 260 +S P Sbjct: 240 LVSDLPQKFQ 249 >gi|298370218|ref|ZP_06981534.1| glutamate racemase [Neisseria sp. oral taxon 014 str. F0314] gi|298281678|gb|EFI23167.1| glutamate racemase [Neisseria sp. oral taxon 014 str. F0314] Length = 269 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 8/263 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 Q I +FDSG+GGL ++ + +P + +Y D PYG ++ + + Sbjct: 1 MSTSKQRPIGVFDSGVGGLTNVRALMERLPMENIVYFGDTARVPYGTKSRATIETFALQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126 +L++ +IACNT + ++R +M L + A + A + T++ I I+ Sbjct: 61 VDFLLEQ-DVKALIIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALSTTRNNRIGII 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ + IHS + ++ +L VEE ++ ++ ++ ++ Sbjct: 120 ATNTTVNSNAYARAIHSRNPDTLVRTQAAALLVPLVEEGWLDHEVTRLTAREYLKPLLVD 179 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVF 245 D +VL CTH+PL+ + RQ +P V +D++ + A A L + T Sbjct: 180 ----NIDTLVLGCTHFPLLKPLIRQEAP-DVTLVDSAITTAEAAAKALAQAGLLNTDNPE 234 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 D+ ++S P + G Sbjct: 235 PDYRFYVSDIPLRFRTIGERFLG 257 >gi|288928934|ref|ZP_06422780.1| glutamate racemase [Prevotella sp. oral taxon 317 str. F0108] gi|288329918|gb|EFC68503.1| glutamate racemase [Prevotella sp. oral taxon 317 str. F0108] Length = 279 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 14/267 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++N+P + I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + + Sbjct: 1 MNNFPQQA---GPIGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYGPRSFDVVYQ 57 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRST-FPSM----AFLGAV-PAIKQAAA 116 + ++ L +I CNTA ++ PS+ LG + P + + Sbjct: 58 FTRQAVVKLFEQG-CHLIIIGCNTASAKALRSIQQRDLPSLDAKRRVLGIIRPTAESIGS 116 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T + + IL+T T++ I + ++ + A+ VE + + Sbjct: 117 LTSTRHVGILATEGTIKSDSYRLEIQKLFPDIVVQGMACPLWAAIVEANEADSPGADYFV 176 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 KK I+ + + D IVL CTHYPL+++ + P V + + +A + L R Sbjct: 177 KKRIDSLL--RTDPQIDAIVLGCTHYPLLMNSIVKHVPPGVRIVPQGEYVANSLQQYLQR 234 Query: 237 INTHQT--RVFDDHALFLSGKPDIAMR 261 + D Sbjct: 235 HPEIDALCTKHGTARYLTTENKDKFKE 261 >gi|254264436|ref|ZP_04955301.1| glutamate racemase [Burkholderia pseudomallei 1710a] gi|254215438|gb|EET04823.1| glutamate racemase [Burkholderia pseudomallei 1710a] Length = 302 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 11/276 (3%) Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M P + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D Sbjct: 13 MTTPYAPDSPAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 72 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + ++ + L V+ACNTA +R P + +G P IK AA ++ Sbjct: 73 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 130 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + +L+T ATLR L+ + + C L +E G ++ Sbjct: 131 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 186 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D +VL CTHYP + R ++ + +D D+IAR+ +L Sbjct: 187 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 246 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 R + GL + Sbjct: 247 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 282 >gi|256839107|ref|ZP_05544617.1| glutamate racemase [Parabacteroides sp. D13] gi|262382441|ref|ZP_06075578.1| glutamate racemase [Bacteroides sp. 2_1_33B] gi|256740026|gb|EEU53350.1| glutamate racemase [Parabacteroides sp. D13] gi|262295319|gb|EEY83250.1| glutamate racemase [Bacteroides sp. 2_1_33B] Length = 276 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 96/259 (37%), Gaps = 11/259 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S + + Sbjct: 7 GPIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSRLFE 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA ++ P+ LG + P ++ +++ I I+ Sbjct: 67 SG-CQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVG 125 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + I + + + VE + +KK I+ Sbjct: 126 TSGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHILS-- 183 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245 + D ++L CTHYPL++ R P + + +A R L R ++ Sbjct: 184 VDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRKLTKG 243 Query: 246 DDHALFLSGKPDIAMRRLM 264 + + Sbjct: 244 GSCRFLTTESAEKFSEAAS 262 >gi|313205149|ref|YP_004043806.1| glutamate racemase [Paludibacter propionicigenes WB4] gi|312444465|gb|ADQ80821.1| glutamate racemase [Paludibacter propionicigenes WB4] Length = 282 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 11/259 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + I IFDSG GGL +L+K+R +PEY +IY+ D+ PYG + K + + Sbjct: 8 PEAPGPIGIFDSGYGGLTILEKIRTELPEYDYIYLGDNARTPYGTRSFDVVYKFTLECVT 67 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123 + + L V+ACNTA ++ + LG + P ++ A T+S I Sbjct: 68 KLFE-MGCQLVVLACNTASAKALRSIQQRDLPLLDANRRVLGVIRPTVEAVGAMTRSKHI 126 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T++ IH + + + +E + + ++K +E Sbjct: 127 GLLATSGTVQSNSYPLEIHKLHDDIVVTSEACPMWVPLIENNEHKSEGADYFVRKNVEHL 186 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + D I+L CTHYPL+ + L P + + + +A+ L R ++R Sbjct: 187 LAA--DPKIDTIMLGCTHYPLLEDKIKSLLPKEISVVSQGEIVAKSLADYLQRHTEMESR 244 Query: 244 VFDD--HALFLSGKPDIAM 260 + F + + Sbjct: 245 CTKNASIRYFSTESVEKFS 263 >gi|332881250|ref|ZP_08448900.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680626|gb|EGJ53573.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 281 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 61/257 (23%), Positives = 102/257 (39%), Gaps = 12/257 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L ++R LMP+Y ++Y+ D+ PYG + + + D Sbjct: 10 GPIGVFDSGYGGLTILHEIRQLMPQYDYLYLGDNARTPYGTRSFEVVYEFTREAVQKLFD 69 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-FPSM-----AFLGAV-PAIKQAAAYTQSGLISIL 126 L ++ACNTA ++ P M LG + P + T S + IL Sbjct: 70 -LGCHLVILACNTASAKALKTIQQNDLPQMEGETRRVLGVIRPTAECIGQITHSRHVGIL 128 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ I + + + VE Y + ++K I Sbjct: 129 ATSGTISSGSYPLEIRKLYPDIVVSGEACPMWVPLVENYEYDSPGADYFVEKRIGNLL-- 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RV 244 ++ D I+L CTHYPL+++ + +P V + + +A + L R +T Sbjct: 187 RKDPAIDTIILGCTHYPLLLNKILKYTPRNVRIVPQGEYVAYSLKDYLQRHTEIETLCTQ 246 Query: 245 FDDHALFLSGKPDIAMR 261 + PD M Sbjct: 247 SGTCRFLTTESPDKFME 263 >gi|256832123|ref|YP_003160850.1| glutamate racemase [Jonesia denitrificans DSM 20603] gi|256685654|gb|ACV08547.1| glutamate racemase [Jonesia denitrificans DSM 20603] Length = 268 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 102/262 (38%), Gaps = 12/262 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GGL V + + +P Y+ D PYG +++ + + ++ Sbjct: 3 DSPIGIFDSGVGGLTVARSILDQLPGESITYIGDTANTPYGPKPLALVRELALTIMDRLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAV-PAIKQAAAYTQSGLISILST 128 D + VIACNTA + + R + + + + PA ++A A T++G I ++ T Sbjct: 63 D-DGVKMLVIACNTASAAVLRDARERYTVGRGIPVVEVILPAARRAVAATRTGKIGVIGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + + S + + V+ VE + + + Sbjct: 122 QATVASRAYDDAL-SVAADLTVSSVACPDFVELVEAGIT----TGPRVIEAATRYLDSLK 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FD 246 D ++L CTHYPL+ + V + +++ A+ L ++ Sbjct: 177 HHDVDTLILGCTHYPLLTGAISYVMGEDVTLVSSAEETAKDVYRTLVAHGLERSPEAGPP 236 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 H F +G + G Sbjct: 237 RHQFFATGDTHAFHVLARRFLG 258 >gi|330996365|ref|ZP_08320248.1| glutamate racemase [Paraprevotella xylaniphila YIT 11841] gi|329573223|gb|EGG54837.1| glutamate racemase [Paraprevotella xylaniphila YIT 11841] Length = 281 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 101/257 (39%), Gaps = 12/257 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L ++R LMP+Y ++Y+ D+ PYG + + + D Sbjct: 10 GPIGVFDSGYGGLTILHEIRQLMPQYDYLYLGDNARTPYGTRSFEVVYEFTREAVQKLFD 69 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-FPSM-----AFLGAV-PAIKQAAAYTQSGLISIL 126 L ++ACNTA ++ P M LG + P + T S + IL Sbjct: 70 -LGCHLVILACNTASAKALKTIQQNDLPKMEGETRRVLGVIRPTAECIGQITHSRHVGIL 128 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ I + + + VE Y + ++K I Sbjct: 129 ATSGTISSGSYPLEIRKLYPDIAVSGEACPMWVPLVENYEYDSPGADYFVEKRIGNLL-- 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RV 244 ++ D I+L CTHYPL+++ + +P V + + +A + L R +T Sbjct: 187 RKDPAIDTIILGCTHYPLLLNKILKYTPRNVRIVPQGEYVAYSLKDYLQRHTEIETLCTQ 246 Query: 245 FDDHALFLSGKPDIAMR 261 + PD Sbjct: 247 SGTCRFLTTESPDKFTE 263 >gi|126667191|ref|ZP_01738165.1| glutamate racemase [Marinobacter sp. ELB17] gi|126628347|gb|EAZ98970.1| glutamate racemase [Marinobacter sp. ELB17] Length = 280 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 84/254 (33%), Positives = 128/254 (50%), Gaps = 10/254 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 S+L+FDSG+GGL V +R P +Y+AD+ GFPYG+ + + +R L + L Sbjct: 7 PSVLVFDSGVGGLSVAASIRRRCPHLPLVYLADNAGFPYGDKPEEEVTRRTCNLVTSALS 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ + V+ACNTA T+ LR A +G VPAIK AAA + + I IL+TPAT+ Sbjct: 67 QFDCQIVVLACNTASTVALPALRQCVSE-AVVGVVPAIKPAAAISVNRRIGILATPATVA 125 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R+Y LI Y + C + + L E A G + + + + E D Sbjct: 126 RSYLDQLIADYAADCQVSRIGHPSLVHWAEGLARGEPVP----QSRLAEILVPFELAGVD 181 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYPL++ +Q +P W+D+ D+IARR LL + + Q + Sbjct: 182 TVVLGCTHYPLLLPALKQAAPGVRFWVDSGDAIARRVEQLLAFLKSAQPQALTSRL---- 237 Query: 254 GKPDIAMRRLMQGF 267 +P + + L Q Sbjct: 238 -QPGMPPKPLQQAL 250 >gi|90407369|ref|ZP_01215554.1| glutamate racemase [Psychromonas sp. CNPT3] gi|90311520|gb|EAS39620.1| glutamate racemase [Psychromonas sp. CNPT3] Length = 271 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 126/239 (52%), Gaps = 5/239 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 ILIFDSG+GGL + +++R + Y++D+ FPYG L +RL+ L +D K+ Sbjct: 6 ILIFDSGVGGLSIFEEIRKKNSKLSCYYLSDNAYFPYGELTKEVLTQRLLCLLTDFTKKH 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA T+ LR F S+ +G VPAIK A T++ +I +++TPAT+ R Sbjct: 66 PVDLIVIACNTASTIALKTLREHF-SIPIVGVVPAIKPACQLTKNNIIGLIATPATITRE 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEGKRTD 193 YTS LI + ++ + ++S L E + I ++K++ F E +R D Sbjct: 125 YTSLLIDEFATKKQVLTLASTALVKLAERKLSALPIDNMMLQKQLSDIFKEWLMLARRPD 184 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 IVL CTH+PL+ + +D+ +IA+R + LLP + HA + Sbjct: 185 TIVLGCTHFPLLKADIELCFGGNIQLVDSGGAIAKRVQKLLPVQ--CSIGMPQHHAFYT 241 >gi|313887367|ref|ZP_07821057.1| glutamate racemase [Porphyromonas asaccharolytica PR426713P-I] gi|312923135|gb|EFR33954.1| glutamate racemase [Porphyromonas asaccharolytica PR426713P-I] Length = 281 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 112/264 (42%), Gaps = 14/264 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++++ I +FDSG GGL +L+K++ +P+Y F+Y+ D+ PYG+ + + Sbjct: 1 MQQIEGPIGVFDSGYGGLTILRKLQEQLPQYDFVYLGDNARSPYGSRSMRVVYQFTREAV 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRST-FPSM-------AFLGAV-PAIKQAAAYTQ 119 + D P L ++ACNTA +++ P + LG + P ++ T Sbjct: 61 ERLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTS 119 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + + IL+T T+ IH + + + VE + ++K Sbjct: 120 TKHVGILATEGTVSSESYVTEIHKLYPDVTVVQEACPLWVPIVETGESDSPGADFFVRKH 179 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 +E + ++ D I+L CTHYP+++ ++L + + + +A+ L R Sbjct: 180 LERLLA--QDEKIDTIILGCTHYPILMPKIQRLLTPSIKVVAQGELVAKSLEEYLVRHPE 237 Query: 240 HQTRVF--DDHALFLSGKPDIAMR 261 ++ + + + + R Sbjct: 238 MAAQLTRGGTTRYYTTEQTERFSR 261 >gi|296132631|ref|YP_003639878.1| glutamate racemase [Thermincola sp. JR] gi|296031209|gb|ADG81977.1| glutamate racemase [Thermincola potens JR] Length = 270 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 17/255 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GG+ VL+ M L+P FIY AD + PYG ++ + + + ++ Sbjct: 7 DRPIGIFDSGVGGISVLKDMVQLLPNEKFIYYADSLNAPYGTKDNETIARLSRNVARFLV 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 DK V+ACNTA + ++LR+ + +G PA+K A + G + +++TP TL Sbjct: 67 DKG-IKTLVVACNTATAVAINQLRAEL-DIPVIGMEPAVKPAVELGKEGKVLVMATPVTL 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ + L+H Y + + L VE+ K EIK+ + + + Sbjct: 125 KQEKFNKLLHRYDEHSRVIPLPCPGLVELVEKGITQGK----EIKEYLSKLLANIQRDQI 180 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--- 249 V+VL CTHY + +Q P + +D + A+R +L + Sbjct: 181 AVVVLGCTHYVFVRDTIKQFFPSQIPVIDGNCGTAKRLLKVLEDAGLRAPEKKGEKEIGM 240 Query: 250 --------LFLSGKP 256 + SG P Sbjct: 241 QVRKMAVKFYTSGDP 255 >gi|228932265|ref|ZP_04095149.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827390|gb|EEM73140.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 265 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 100/254 (39%), Gaps = 7/254 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNT S+ +G + P + A T+ G I ++ T T++ Sbjct: 60 KALVVACNT-AAAAALAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 +H + +H + LA+ VE + ++++ + + D ++ Sbjct: 119 YEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKEDIDTLI 174 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSV 234 Query: 257 DIAMRRLMQGFGLK 270 + G + Sbjct: 235 SSFEHIAERWLGYQ 248 >gi|332669874|ref|YP_004452882.1| glutamate racemase [Cellulomonas fimi ATCC 484] gi|332338912|gb|AEE45495.1| glutamate racemase [Cellulomonas fimi ATCC 484] Length = 271 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 13/261 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P +Y+ D + PYG A++ + + D++ Sbjct: 3 DAPIGIFDSGVGGLTVARSVLDQLPHESTLYIGDTLNTPYGPKPLAAVRAHALEVMDDLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILST 128 D L VIACNTA + + R + + + + PA ++A A T++G I ++ T Sbjct: 63 DAG-VKLLVIACNTASAAVLRDARERYTLRRGIPVVEVILPAARRAVAATRTGRIGVIGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + + + + VE E+ Sbjct: 122 RATVDSRAYDDAF-AVAPGVTLTSQACPRFVELVEAGVTSGP----EVLAVAHEYLDPVR 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--D 246 D +VL CTHYPL+ V + V + +S+ A+ L + Sbjct: 177 DAGVDTLVLGCTHYPLLTGVISYVMGDDVTLVSSSEETAKDVYRTLVGHGIERDPAADLP 236 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 H +G P +A + L + F Sbjct: 237 THRFLATGDP-VAFQTLARRF 256 >gi|283782931|ref|YP_003373685.1| glutamate racemase [Gardnerella vaginalis 409-05] gi|283441996|gb|ADB14462.1| glutamate racemase [Gardnerella vaginalis 409-05] Length = 256 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 7/257 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +I +FDSG+GG+ V +++ +P IY D PYG +KK + + Sbjct: 4 SAAIGVFDSGLGGISVARQLHAALPHERIIYFGDSANAPYGIKTPEEVKKLSFAIVEHFV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPA 130 + VIACNTA + ++LR+ + ++ +G PA+K A + + + +TP Sbjct: 64 -RLNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGEPQRVIVAATPL 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR ++L+ + I L VE D + + F E + Sbjct: 122 TLRERKFADLLQRFSQNNTIFSQPCPDLVRIVERGELN---NRDVVFAALHKYFDEYDLD 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTH+ FR+ P + +D ++ R +L N + + Sbjct: 179 SIDSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKILELNNELASDSQEGSIT 238 Query: 251 FLSGKPDIAMRRLMQGF 267 + + M++L + Sbjct: 239 LTNSDTSLRMQQLAKSL 255 >gi|113461596|ref|YP_719665.1| glutamate racemase [Haemophilus somnus 129PT] gi|123132293|sp|Q0I5M2|MURI_HAES1 RecName: Full=Glutamate racemase gi|112823639|gb|ABI25728.1| glutamate racemase [Haemophilus somnus 129PT] Length = 267 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 77/241 (31%), Positives = 127/241 (52%), Gaps = 4/241 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +IL FDSG+GGL V ++ + L+P+ H++Y D+ FPY ++ + R + + I Sbjct: 5 IQPTILFFDSGVGGLSVYKETKQLLPDCHYLYCFDNGFFPYSEKDEKDIIDRTLRICQKI 64 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 Y L VIACNTA T++ ELR F S+ +G VPAIK AA +++ I +++T T Sbjct: 65 NQAYPLDLIVIACNTASTVVLPELRRNF-SIPIVGTVPAIKPAAEMSETKHIGLIATKGT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++RTY ++LI +Y C + + S L E+ G ++ + +K+E+ + K Sbjct: 124 IKRTYVNDLIKNYAHHCMVEKIGSTKLVEIAEQKLRGGEVDLNVLKQELSPW---QTMKS 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PLI P ++ + +IA+R + LL I + Sbjct: 181 LDSVVLGCTHFPLIKEEIECCLPQVKFFVSSGKAIAKRVKFLLKGIEVRSKIQKKNLIFC 240 Query: 252 L 252 Sbjct: 241 T 241 >gi|313115114|ref|ZP_07800601.1| glutamate racemase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622554|gb|EFQ06022.1| glutamate racemase [Faecalibacterium cf. prausnitzii KLE1255] Length = 275 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 102/262 (38%), Gaps = 12/262 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I +FDSG+GGL ++++R +P IY D PYG+ + + Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPHEEIIYFGDTGRVPYGSRSPETILQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + +L K + AC T + + P A ++AA T++ Sbjct: 53 YARQDVAFLLSK-NVKCIMAACGTVSSTYPAAEAAKLPVPYLGVVDAAAREAAFATRNRR 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY--ACGIKIKEDEIKKEI 180 I ++ T AT+R L+ V I + + VE + ++ K I Sbjct: 112 IGVIGTAATIRSRSYEKLLRQLVPGVEITAQACPLFVPLVEAGYVDHSEESRQQVTKLVI 171 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E D ++L CTHYPL+ + + V +D + + A +L Sbjct: 172 AQYLTEVREAGVDTLILGCTHYPLLKTMIGEFMGQSVTLVDPAKTAAHHLEQMLSERGLK 231 Query: 241 QTRVFDDHA-LFLSGKPDIAMR 261 + + A ++S PD ++ Sbjct: 232 AAQEHEGQAHFYVSDVPDSFVQ 253 >gi|253583512|ref|ZP_04860710.1| glutamate racemase [Fusobacterium varium ATCC 27725] gi|251834084|gb|EES62647.1| glutamate racemase [Fusobacterium varium ATCC 27725] Length = 263 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 104/262 (39%), Gaps = 11/262 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K +I +FDSG+GG VL+++ L+P + IY D+ PYG ++ + + Sbjct: 2 KKNYNIGVFDSGVGGTTVLKRIIELLPNENIIYYGDNGNAPYGEKTTKEIQGFCLDIMDF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 + VIACNTA D ++ + ++ +G + P K A + + I +LSTP Sbjct: 62 FMM-NNCKAVVIACNTATAASLDLIKGRY-TVPVIGVISPGAKSAVETSTNKCIGVLSTP 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T ++ I Y ++ L +E + +E IK I K Sbjct: 120 FTAASNAYADEIAKYSKTAKVYQEGCPELCPMIEAGWETFEDRETIIKNHI-----SKFP 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDH 248 + D +VL CTHYP+ + +D + + L + + Sbjct: 175 RNVDTVVLGCTHYPIAREDIAKNFCGN--IVDPAKETSIALYNTLKNSDLLSDSDAKGKI 232 Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270 F+SG + + Q G + Sbjct: 233 DFFVSGDKEKFKKVAEQFLGFE 254 >gi|296162473|ref|ZP_06845264.1| glutamate racemase [Burkholderia sp. Ch1-1] gi|295887286|gb|EFG67113.1| glutamate racemase [Burkholderia sp. Ch1-1] Length = 284 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 9/246 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++ Sbjct: 9 RAPVGIFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLV 68 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +R P + +G P IK AA +++ + +L+T TL Sbjct: 69 KQGAKAL-VVACNTATAQSIAMVREKLP-IPLVGVEPGIKPAALQSKTRVAGVLATQVTL 126 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ Y + C L VE I E+ + G Sbjct: 127 RSARFQALLERYAADCRFLCQPGHGLVQAVER----CDISSAELHALLRGYLQPMLDAGA 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--- 249 D +VL CTHYP + R + + +D S +IAR+ +L + A Sbjct: 183 DTLVLGCTHYPFLDTAIRDIVGDRLVLIDTSVAIARQLERVLDQHGLRAAPESGGTALPR 242 Query: 250 LFLSGK 255 + +G Sbjct: 243 FYSTGD 248 >gi|194468341|ref|ZP_03074327.1| glutamate racemase [Lactobacillus reuteri 100-23] gi|194453194|gb|EDX42092.1| glutamate racemase [Lactobacillus reuteri 100-23] Length = 267 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 6/255 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL V++ +R MP+ I+V D FPYG +++ + + +L Sbjct: 3 KRPIGVMDSGLGGLSVIRVLREQMPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + +IACNTA L++ P + +G + AA I ++ T +T+ Sbjct: 63 EQ-DVKMMIIACNTATAAALQLLQNELP-IPVIGVIEPGAMAATQHHYKKIGVIGTESTI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + ++ + + L S VE G E +K ++ + K Sbjct: 121 KNGAYAKILAKLNPTLSVISSPAQPLVSIVEHGQTGT----SEAQKAVDTELEVFDNKSI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 + ++L CTH+P + V +D + R+A+ LL N + L+ Sbjct: 177 EALILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTSENQLSDDLTSSIDLYS 236 Query: 253 SGKPDIAMRRLMQGF 267 +G + + Sbjct: 237 TGDVKDLVAGAQKWL 251 >gi|154488995|ref|ZP_02029844.1| hypothetical protein BIFADO_02305 [Bifidobacterium adolescentis L2-32] gi|154083132|gb|EDN82177.1| hypothetical protein BIFADO_02305 [Bifidobacterium adolescentis L2-32] Length = 258 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ V +++R MP H +Y D PYG +++ + ++ Sbjct: 5 APIGVFDSGLGGISVAREIRRDMPNEHVLYFGDSANAPYGTKSPEQVRELSDVIVKRFVE 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131 + VIACNTA + +ELR T+ + +G PA+K A + + + + +TP T Sbjct: 65 QG-VKAVVIACNTATSAAANELRDTY-DIPIIGMEPALKVACDRGHGKRQHVIVAATPLT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 LR + L+ + + I L VE D + + + F + + Sbjct: 123 LRERKFAVLMDRFKADHTIFPEPCPGLVEIVEHGQLD---DHDVVMRTLHQYFDQYDLST 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+ FR+L P +D ++ R +L + + Sbjct: 180 IDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLAPEDAEGSIDL 239 Query: 252 LSGKPDIAMRRLMQGF 267 + + +L Q Sbjct: 240 ANSDTSARIAQLAQSL 255 >gi|1346607|sp|P48797|MURI_LACBR RecName: Full=Glutamate racemase gi|468450|dbj|BAA06106.1| glutamate racemase [Lactobacillus brevis] Length = 276 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 103/257 (40%), Gaps = 7/257 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL VL++++ L+P + +++ D PYG + + + Sbjct: 3 NDPIGLMDSGVGGLTVLKEVQRLLPTENTVFLGDQARLPYGPRSVAEVTMFTKQIAQFLR 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + VIACNTA ++ T P + +G + P + A T++ I +++T T Sbjct: 63 QQARIKALVIACNTATAAALTTMQQTLP-IPVIGVIAPGAQAAVQTTRNHRIGVIATAGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I + I V+ + + E+ + + + K+ Sbjct: 122 VKSDQYRRDILAAAPNSQIFSVACPEMVTLAEQN----DLTTTHAQSVVAANLASLMDKK 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-L 250 D +V+ CTH+PL+ + V +D + A + +L + A Sbjct: 178 IDTLVMGCTHFPLLRSAIQHAVGSQVTLVDPGLATAEQTVAILKTRGLLNSATTRGTAQF 237 Query: 251 FLSGKPDIAMRRLMQGF 267 F +G+ D Q Sbjct: 238 FTTGETDQFDTLASQWL 254 >gi|325268397|ref|ZP_08135029.1| glutamate racemase [Prevotella multiformis DSM 16608] gi|324989251|gb|EGC21202.1| glutamate racemase [Prevotella multiformis DSM 16608] Length = 279 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L +R L+PEY +IY+ D+ PYG+ + + + Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYIYLGDNARAPYGSRSFDIVYQFTRQAVMKLF- 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ CNTA ++ P LG + P + T+S + +L+ Sbjct: 68 GLGCQLVILGCNTASAKALRTIQQNDLPALDPDRRVLGVIRPTAEIIGRLTRSRHVGLLA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+R + I + V + +E + +KK I+ I + Sbjct: 128 TEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH--IMR 185 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + D ++L CTHYP+++ + +P V + + +A R L R R Sbjct: 186 IDPQIDSLILGCTHYPILMPKILKHAPHGVRIIPQGEYVAESLRDYLRRHPDMDARCTKH 245 Query: 246 DDHALFLSGKPDIAMR 261 + P+ Sbjct: 246 STAKYLTTENPEKFKE 261 >gi|153003580|ref|YP_001377905.1| glutamate racemase [Anaeromyxobacter sp. Fw109-5] gi|152027153|gb|ABS24921.1| glutamate racemase [Anaeromyxobacter sp. Fw109-5] Length = 259 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 8/253 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + +P +Y+ D PYG + + + +L ++ Sbjct: 4 IGIFDSGVGGLTVQRAILEALPSVDTVYLGDTARVPYGTKSADTVTQYSLRNA-RLLARH 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L V+ACNTA + LR+ P + AA ++ G I ++ T T+ Sbjct: 63 EIDLLVVACNTASAVALPALRAELAVPVLGVVEPGARAAARASRGGRIGVIGTQGTVSSG 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + + + + + EE + ++ + R D + Sbjct: 123 AYQSALRAARPDAEVVARACPLFVPLAEEGWTDP--GDPVVRGAVARYLAPLREARIDTL 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYPL+ + P V +D++++IA R R+ + R HA ++ Sbjct: 181 VLGCTHYPLLREAIARELPEVV-LVDSAEAIAAEVRA---RMGEERGRE-GSHAFLVTDA 235 Query: 256 PDIAMRRLMQGFG 268 P+ + + G Sbjct: 236 PEKFLAVAGRFLG 248 >gi|116333824|ref|YP_795351.1| glutamate racemase [Lactobacillus brevis ATCC 367] gi|122269489|sp|Q03R52|MURI_LACBA RecName: Full=Glutamate racemase gi|116099171|gb|ABJ64320.1| Glutamate racemase [Lactobacillus brevis ATCC 367] Length = 276 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 100/257 (38%), Gaps = 7/257 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL VL++++ L+P + +++ D PYG + + + Sbjct: 3 NDPIGLMDSGVGGLTVLKEVQRLLPTENTVFLGDQARLPYGPRSVAEVTMFTKQIAQFLR 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + VIACNTA ++ T P + +G + P + A T++ I +++T T Sbjct: 63 QQAGIKALVIACNTATAAALTTMQQTLP-IPVIGVIAPGAQAAVQTTRNHRIGVIATAGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I + I V+ + + E+ + + + K+ Sbjct: 122 VKSDQYRRDILAAAPNSQIFSVACPEMVTLAEQN----DLTTTHARSVVAANLASLMDKK 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-L 250 D +V+ CTH+PL+ + V +D + A + +L A Sbjct: 178 IDTLVMGCTHFPLLRSAIQHAVGSQVTLVDPGLATAEQTAAILKTHGLLNPATTRGTAQF 237 Query: 251 FLSGKPDIAMRRLMQGF 267 F +G+ Q Sbjct: 238 FTTGETAHFDTLASQWL 254 >gi|91787921|ref|YP_548873.1| glutamate racemase [Polaromonas sp. JS666] gi|91697146|gb|ABE43975.1| glutamate racemase [Polaromonas sp. JS666] Length = 281 Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 108/273 (39%), Gaps = 15/273 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +I +FDSGIGGL +L+ +R +P +F+YVAD PYG ED + R + +L Sbjct: 3 SQAIGVFDSGIGGLSILKALRAELPHENFVYVADSGHAPYGEREDCFVVARSRAITRHLL 62 Query: 73 DKYQPV--LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + VIACNTA LR P++ +G PA+K A +++ I +++T Sbjct: 63 TQQHVKVKALVIACNTATAAAIHLLREEHPNLPIIGVEPALKPATLLSRTRRIGVMATRG 122 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE---- 186 TL L S Q L LA +E K + + C Sbjct: 123 TLASARFKRLRDSLAGQAEFVLQPCDGLADAIERGI-DDKADPGSATEILAACAHHTRAM 181 Query: 187 ----KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-- 240 D +VL CTHYP R L V +LD +AR+ R LP Sbjct: 182 GPFGLNEGEIDTLVLGCTHYPFASEHLRALLGPHVQFLDTGAPVARQTRLRLPAAEPQTV 241 Query: 241 --QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 LF +G+ + + L S Sbjct: 242 APAAPGMGQVKLFTTGQTNTLQAAVQHWLQLDS 274 >gi|33152892|ref|NP_874245.1| glutamate racemase [Haemophilus ducreyi 35000HP] gi|71151975|sp|Q7VKJ3|MURI_HAEDU RecName: Full=Glutamate racemase gi|33149117|gb|AAP96634.1| glutamate racemase [Haemophilus ducreyi 35000HP] Length = 265 Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 125/262 (47%), Gaps = 7/262 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +IL++DSG+GGL V ++R +P H++Y D+ FPY L +R + + Sbjct: 1 MKPTILLYDSGMGGLTVYDEIRKKLPNAHYLYYFDNACFPYSEKPTEVLVERATKMVQKM 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 Y L V+ACNTA T++ LR FP +G VPAIK AAA +Q+ I +L+T T Sbjct: 61 AKNYPLDLVVVACNTASTVVLPTLRKIFP-FPIVGTVPAIKPAAALSQTKTIGLLATKGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R Y +LI Y C I + S L VE+ I + I + Sbjct: 120 ITRPYVLSLIEQYAPNCQIEKIGSTALVELVEQKLQTGVIDLTRLTPIIADW---QNHPT 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249 D ++L CTH+P+ +QL P +LD+ ++IA R L+ N + ++ A Sbjct: 177 LDTVILGCTHFPMAKTELQQLLPNVKYFLDSGNAIANRVTHLIMHSPHNQQLEKQRENLA 236 Query: 250 LFLSGKPDIAMR-RLMQGFGLK 270 + ++MQ +G Sbjct: 237 FCTQQNNQFKQQAKIMQRWGFP 258 >gi|160898092|ref|YP_001563674.1| glutamate racemase [Delftia acidovorans SPH-1] gi|160363676|gb|ABX35289.1| glutamate racemase [Delftia acidovorans SPH-1] Length = 296 Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 17/274 (6%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72 + I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ D +++R + + Sbjct: 6 SPIGVFDSGIGGLSVLQALRHELPHERFVYLADSGNAPYGDARGDAFVQQRTRTIARHLR 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA D LR+ P + +G PAIK A+ +Q+G + +++T T+ Sbjct: 66 EQHQIKVLVIACNTATAAAVDMLRAEMPELPLIGVEPAIKPASLSSQTGHVGVMATRGTV 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-- 190 + L+ + + H+ LA +EE + + D + E+ Sbjct: 126 SSARFARLVAEHGQRVQFHVQPCDGLAKAIEE-STEQPVPADPMATEVAQLCARYVNALG 184 Query: 191 -------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 D +VL CTHY R L + ++D +AR+ R +L R+ T + Sbjct: 185 SFGQKTGEMDSLVLGCTHYIFAREQLRTLLGPDIQFIDTGAPVARQTRRVLDRLGTLTSE 244 Query: 244 VFD------DHALFLSGKPDIAMRRLMQGFGLKS 271 L +G + L + Sbjct: 245 SGPLPAAEGQVQLMTTGSLQALQSAASRWLELPA 278 >gi|119026186|ref|YP_910031.1| glutamate racemase [Bifidobacterium adolescentis ATCC 15703] gi|166231027|sp|A1A2L6|MURI_BIFAA RecName: Full=Glutamate racemase gi|118765770|dbj|BAF39949.1| glutamate racemase [Bifidobacterium adolescentis ATCC 15703] Length = 258 Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ V +++R MP H +Y D PYG +++ + ++ Sbjct: 5 APIGVFDSGLGGISVAREIRRDMPNEHVLYFGDSANAPYGTKSPEQVRELSDVIVKRFVE 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131 + VIACNTA + +ELR T+ + +G PA+K A + + + + +TP T Sbjct: 65 QG-VKAVVIACNTATSAAANELRDTY-DIPIIGMEPALKVACDRGHGKRQRVIVAATPLT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 LR + L+ + + I L VE D + + + F + + Sbjct: 123 LRERKFAVLMDRFKADHTIFPEPCPGLVEIVEHGQLD---DHDVVMRTLHQYFDQYDLST 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+ FR+L P +D ++ R +L + + Sbjct: 180 IDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLAPEDAEGSIDL 239 Query: 252 LSGKPDIAMRRLMQGF 267 + + +L Q Sbjct: 240 ANSDTSARIAQLAQSL 255 >gi|160892852|ref|ZP_02073641.1| hypothetical protein CLOL250_00382 [Clostridium sp. L2-50] gi|156865411|gb|EDO58842.1| hypothetical protein CLOL250_00382 [Clostridium sp. L2-50] Length = 259 Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 5/240 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 I IFDSGIGG+ VL+++ LMPE ++IY D PYG + ++ Sbjct: 1 MNDNSRPIGIFDSGIGGISVLKEIVALMPEENYIYYGDSAHAPYGTRQVADIQNLSRSCV 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +L+ + VIACNTA + LR+ +P + +G PA+K A + + I++++T Sbjct: 61 EFLLE-HDAKAIVIACNTATSAAAAMLRADYPDIPVIGIEPALKPAVLWKEHDRIAVMAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 P TL++ +L+H+Y + I+ V L VE + ++ ++ Sbjct: 120 PMTLKQDKFLSLMHTYEDRSVIYRVPCPKLVGFVENG----DLDSPKLHDYLQEVLSPYL 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 K D IVL CTHYP + + R + + S A R L D Sbjct: 176 EKGIDAIVLGCTHYPFVEKMIRTVVGPDIKIFVGSHGTAVELRRRLIAAGLKSDSTGDGT 235 >gi|228926020|ref|ZP_04089101.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833732|gb|EEM79288.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 265 Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 103/254 (40%), Gaps = 7/254 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 60 KALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 +H + +H + LA+ VE + ++++ + + D ++ Sbjct: 119 YEKALHELDTYLKVHSHACPNLATVVENRLE----DTAYVTQQVKQALLPLTKEDIDTLI 174 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSV 234 Query: 257 DIAMRRLMQGFGLK 270 + G + Sbjct: 235 SSFEHIAERWLGYQ 248 >gi|317474408|ref|ZP_07933682.1| Asp/Glu/Hydantoin racemase [Bacteroides eggerthii 1_2_48FAA] gi|316909089|gb|EFV30769.1| Asp/Glu/Hydantoin racemase [Bacteroides eggerthii 1_2_48FAA] Length = 279 Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + + Sbjct: 10 GPIGVFDSGYGGLTILSKIREILPEYDYIYLGDNARAPYGTRSFEVVYAFTLQAVTRLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L + LG + P ++ T+S + +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPHLDSARRVLGVIRPTVECIGNITRSRHVGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ I + + + S VE + I+K I Sbjct: 129 TSGTIKSESYPLEIRKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFIRKYINELLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D +L CTHYP+++ +Q P + + +A + L R + Sbjct: 187 KDREIDTAILGCTHYPILLPKIQQYMPAGITIVSQGQLVADSLKDYLHRHPEIDIKCTRG 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + Sbjct: 247 GKCTYYTTEAEEKFIE 262 >gi|182420059|ref|ZP_02951293.1| glutamate racemase [Clostridium butyricum 5521] gi|237669542|ref|ZP_04529522.1| glutamate racemase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376096|gb|EDT73683.1| glutamate racemase [Clostridium butyricum 5521] gi|237654986|gb|EEP52546.1| glutamate racemase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 256 Score = 269 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 67/244 (27%), Positives = 110/244 (45%), Gaps = 7/244 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I FDSG+GGL VL++ +MP ++IY D PYG E + K L F D L Sbjct: 5 NSPIGFFDSGVGGLSVLKEAISIMPNENYIYFGDSKNAPYGTKELDEV-KHLTFNAVDFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNTA + +E+R+ + +G PA+K A ++G I I++TP TL Sbjct: 64 REKNVKAIVVACNTATSAAIEEIRNKHNDIPIIGIEPALKPAVKLKRNGKIIIMATPMTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ Y +I + L +E ++ DE++K ++ F + Sbjct: 124 REKKFKQLMVKYQEGSNIVPMPCAGLVEFIENGI----LEGDELEKYLKNKF-DIYFDDI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 IVL CTHYP I ++ + +D + + L T ++ + ++ Sbjct: 179 AAIVLGCTHYPFIKETLAKVVGSEIPLIDGGAGTSHELQRKLEEKGTISVSKNIGNVEIY 238 Query: 252 LSGK 255 S Sbjct: 239 NSTN 242 >gi|298253437|ref|ZP_06977229.1| glutamate racemase [Gardnerella vaginalis 5-1] gi|297532832|gb|EFH71718.1| glutamate racemase [Gardnerella vaginalis 5-1] Length = 256 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 7/257 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +I +FDSG+GG+ V +++ +P IY D PYG +KK + + Sbjct: 4 SAAIGVFDSGLGGISVARQLHAALPHERIIYFGDSANAPYGIKTPEEVKKLSFAIVEHFV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPA 130 + VIACNTA + ++LR+ + ++ +G PA+K A + + + +TP Sbjct: 64 -RLNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGEPQRVIVAATPL 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR ++L+ + I L VE D + + F E + Sbjct: 122 TLRERKFADLLQRFSQNNTIFSQPCPDLVRIVERGELS---NRDVVFAALHKYFDEYDLD 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTH+ FR+ P + +D ++ R +L N + + Sbjct: 179 SIDSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKILELNNELASDSQEGSIT 238 Query: 251 FLSGKPDIAMRRLMQGF 267 + + M++L + Sbjct: 239 LTNSDTSLRMQQLAKSL 255 >gi|297620368|ref|YP_003708505.1| Glutamate racemase [Waddlia chondrophila WSU 86-1044] gi|297375669|gb|ADI37499.1| Glutamate racemase [Waddlia chondrophila WSU 86-1044] Length = 276 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 7/258 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N+I +FDSG+GGL V++ + +P+ IY D PYG + + + + +L Sbjct: 2 NAIAVFDSGLGGLTVVKALCEHLPQEEIIYFGDTARVPYGGKSRETVIRYAREISAFLLS 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + VI CNTA D L + + + + + + Q+ I++L T AT+R Sbjct: 62 Q-EIKALVIGCNTASAYAADLLAAEL-ELPVFNVIDPLIEEISACQAEHIAVLGTAATVR 119 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + +S + VEE+ + +E + +R D Sbjct: 120 SGIYQARLAQKIPNVKVTGISCPLFVPIVEEHFQNHP----AARLIVEEYLFRVKDERMD 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252 +VL CTHYPL+ + R+ V +D++ + A++ + L + + V F+ Sbjct: 176 TVVLGCTHYPLLYCLIREYLGDEVRIVDSASACAKQIQAALFSHPFNNSLSVKGKLKYFV 235 Query: 253 SGKPDIAMRRLMQGFGLK 270 S P+ Q G++ Sbjct: 236 SDDPERFKHLGEQFLGVE 253 >gi|229830192|ref|ZP_04456261.1| hypothetical protein GCWU000342_02301 [Shuttleworthia satelles DSM 14600] gi|229791490|gb|EEP27604.1| hypothetical protein GCWU000342_02301 [Shuttleworthia satelles DSM 14600] Length = 258 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 7/249 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++ I +FDSG+GG+ VL+++ LMP F+Y D PYG E +++ + Sbjct: 1 MVREKNAPIAVFDSGMGGISVLRELVKLMPREDFLYFGDSKNAPYGTRELPEIQELTIRN 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++++ ++V ACNTA + +LR +P+ +G PA+K A G + +++ Sbjct: 61 IQHLMNRGCKAVAV-ACNTATSAAVRKLREMYPNFPIVGIEPAVKPACMENPGGKVLVMA 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP T+R L + I +S L VEE + + E+ +E Sbjct: 120 TPMTVRLGKLHLLCERFRHVAQIETLSCPGLMEFVEEG----RDQTPELMHFLEELLAPY 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + D +VL CTHYP + ++L V D + AR + + Sbjct: 176 --RDVDAVVLGCTHYPFVRKQVQELMGASVKIYDGAAGTARELLRRIRLEDLETESKELG 233 Query: 248 HALFLSGKP 256 +F + P Sbjct: 234 SVIFENSDP 242 >gi|218264477|ref|ZP_03478310.1| hypothetical protein PRABACTJOHN_04010 [Parabacteroides johnsonii DSM 18315] gi|218221970|gb|EEC94620.1| hypothetical protein PRABACTJOHN_04010 [Parabacteroides johnsonii DSM 18315] Length = 278 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 96/248 (38%), Gaps = 11/248 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL + K+R MP Y +IY+ D+ PYG + + + + Sbjct: 7 GPIGIFDSGYGGLTIFDKIREAMPGYDYIYLGDNARSPYGTRSFEVVYRFTRQAVETLFN 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + L ++ACNTA ++ P+ LG + P ++ ++S + IL Sbjct: 67 EG-CQLVILACNTASAKALRTIQQRDLPQWDPARRVLGVIRPTVELMDKISKSKHVGILG 125 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ S I + + + VE G + ++K +E Sbjct: 126 TTGTITSGSYSLEIKKMFPHMTVTGEACPMWVPLVENNEFGSPGADYFVRKHLEHILA-- 183 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245 + D +VL CTHYPL++ + P + + +A L R R+ Sbjct: 184 TDPKIDTLVLGCTHYPLLIEKIKAFLPAGITLFSQGEYVAASLTDYLHRHPEMDIRLTKQ 243 Query: 246 DDHALFLS 253 + + Sbjct: 244 GNCRFLTT 251 >gi|298374652|ref|ZP_06984610.1| glutamate racemase [Bacteroides sp. 3_1_19] gi|298269020|gb|EFI10675.1| glutamate racemase [Bacteroides sp. 3_1_19] Length = 276 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 95/259 (36%), Gaps = 11/259 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + + + Sbjct: 7 GPIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVLRLFE 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA ++ P+ LG + P ++ +++ I I+ Sbjct: 67 SG-CQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVG 125 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + I + + + VE + +KK I+ Sbjct: 126 TSGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHILS-- 183 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245 + D ++L CTHYPL++ R P + + +A R L R ++ Sbjct: 184 VDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRKLTKG 243 Query: 246 DDHALFLSGKPDIAMRRLM 264 + + Sbjct: 244 GSCRFLTTESAEKFSEAAS 262 >gi|228944589|ref|ZP_04106959.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229120481|ref|ZP_04249728.1| Glutamate racemase [Bacillus cereus 95/8201] gi|228663066|gb|EEL18659.1| Glutamate racemase [Bacillus cereus 95/8201] gi|228815049|gb|EEM61300.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 265 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 103/254 (40%), Gaps = 7/254 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 60 KALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 +H + +H + LA+ VE + ++++ + + D ++ Sbjct: 119 YEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKEDIDTLI 174 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSV 234 Query: 257 DIAMRRLMQGFGLK 270 + G + Sbjct: 235 SSFEHIAERWLGYQ 248 >gi|46199582|ref|YP_005249.1| glutamate racemase [Thermus thermophilus HB27] gi|81567628|sp|Q72I52|MURI_THET2 RecName: Full=Glutamate racemase gi|46197208|gb|AAS81622.1| glutamate racemase [Thermus thermophilus HB27] Length = 257 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 17/260 (6%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I +FDSG+GGL VL+ +R L+P F+Y D PYG +++ + Sbjct: 1 MKDPKAPIGVFDSGVGGLTVLKALRRLLPREEFLYFGDTARVPYGGKPLAMVRRFAWEIA 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +L + V+ACNTA + +L F PA + A + + + ++ T Sbjct: 61 GFLL-RQGVKAIVVACNTASSAALPDLAEDLSVPVFGVVEPAARAARGFRK---VGLIGT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + + + VEE + +D + + ++E Sbjct: 117 QATVESGAYPRYVDLA------WAKACPLFVPLVEEG-----LWDDPVALLVARHYLEDA 165 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 K + ++L CTHYP + + P V LD+++ AR L Sbjct: 166 PKDLEALILGCTHYPFLKGAIGAVLP-GVALLDSAELTAREVARALEAEGLLNPEGRGRT 224 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 ++G P+ A R L + G Sbjct: 225 LHLVTGDPE-AYRALAERLG 243 >gi|170747215|ref|YP_001753475.1| glutamate racemase [Methylobacterium radiotolerans JCM 2831] gi|170653737|gb|ACB22792.1| glutamate racemase [Methylobacterium radiotolerans JCM 2831] Length = 291 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 98/244 (40%), Positives = 143/244 (58%), Gaps = 2/244 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +IL+FDSG+GGL VL +R P+ ++YV DD FPYG + L R++ + + Sbjct: 20 AEPTILVFDSGLGGLTVLDAVRRARPDARYVYVGDDAAFPYGRLSEATLVARVLTVMERL 79 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + ++P L VIACNTA TL+ LR F + F+G VP IK AA T+S L+++L+TP T Sbjct: 80 VATHRPDLVVIACNTASTLVLPALRQRFTT-PFVGVVPPIKPAAEATRSRLVTLLATPGT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF-IEKEGK 190 + R+YT +LI +Y C + LV S LA E G + + + EI CF E +G+ Sbjct: 139 VARSYTHDLIATYAGTCAVTLVGSQNLAGFAEAELAGAPVDDAALAAEIAPCFVAEADGR 198 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 RTDV+ LACTHYPL++ + ++PWPV W+D + +IARR L+ R Sbjct: 199 RTDVVCLACTHYPLLLPRLQAVAPWPVTWIDPAPAIARRVVQLIGPRPREADRHGSALGA 258 Query: 251 FLSG 254 F +G Sbjct: 259 FTAG 262 >gi|187934900|ref|YP_001884328.1| glutamate racemase [Clostridium botulinum B str. Eklund 17B] gi|229486235|sp|B2THT3|MURI_CLOBB RecName: Full=Glutamate racemase gi|187723053|gb|ACD24274.1| glutamate racemase [Clostridium botulinum B str. Eklund 17B] Length = 258 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 5/234 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I FDSG+GGL V+++ LMP ++IY D PYG ++ Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAIRLMPNENYIYFGDSKNAPYGVKTVEEVRTLTFNAVES 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L+K V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP Sbjct: 63 LLEK-NVKAIVVACNTATSAAIDLVRSKYENIPIIGIEPALKLATKYNRKGNIIIMATPM 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL+ +L+ Y I + L +E + E+ +K++ F + Sbjct: 122 TLKENKFKSLMEKYGENYDIVSLPCAKLVEFIEHGILSGEELEEYLKEK----FKPYKNN 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 V+VL CTHYP I ++ + +D ++ R L N T Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTEE 231 >gi|187923408|ref|YP_001895050.1| glutamate racemase [Burkholderia phytofirmans PsJN] gi|187714602|gb|ACD15826.1| glutamate racemase [Burkholderia phytofirmans PsJN] Length = 284 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 9/244 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++ + Sbjct: 11 PVGIFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLVKQ 70 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA +R P + +G P +K AA +++ + +L+T TLR Sbjct: 71 GAKAL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKTRVAGVLATQVTLRS 128 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ Y + C L VE + E++ + G D Sbjct: 129 ARFQALLERYAADCRFLCQPGHGLVQAVER----CDVGSAELRALLRGYLQPMLDAGADT 184 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHALF 251 +VL CTHYP + R + + +D S +IAR+ +L + + F Sbjct: 185 LVLGCTHYPFLDAAIRDIVGDRLMLIDTSIAIARQLERVLDQHGLRAVPPSAATVSPRFF 244 Query: 252 LSGK 255 +G Sbjct: 245 STGD 248 >gi|56552093|ref|YP_162932.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543667|gb|AAV89821.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4] Length = 276 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 85/226 (37%), Positives = 128/226 (56%), Gaps = 1/226 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L + Sbjct: 1 MSRPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R+ Y +L + S C + S L + E G K + E++ + EG R Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDR 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L ++ Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYLADQL 225 >gi|218131992|ref|ZP_03460796.1| hypothetical protein BACEGG_03615 [Bacteroides eggerthii DSM 20697] gi|217985868|gb|EEC52208.1| hypothetical protein BACEGG_03615 [Bacteroides eggerthii DSM 20697] Length = 279 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + + Sbjct: 10 GPIGVFDSGYGGLTILSKIREILPEYDYIYLGDNARAPYGTRSFEVVYAFTLQAVTRLFE 69 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA +L + LG + P ++ T+S + +L+ Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPHLDSARRVLGVIRPTVECIGNITRSRHVGVLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ I + + + S VE + I+K I Sbjct: 129 TSGTIKSESYPLEIRKLFPDIKVSGEACPLWVSLVENNEALGDGTDYFIRKYINELLA-- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D +L CTHYP+++ +Q P + + +A + L R + Sbjct: 187 KDREIDTAILGCTHYPILLPKIQQYMPAGITIVSQGQLVADSLKDYLHRHPEIDIKCTRG 246 Query: 246 DDHALFLSGKPDIAMR 261 + + + + Sbjct: 247 GKCTYYTTEAEEKFIE 262 >gi|319763448|ref|YP_004127385.1| glutamate racemase [Alicycliphilus denitrificans BC] gi|330824305|ref|YP_004387608.1| glutamate racemase [Alicycliphilus denitrificans K601] gi|317118009|gb|ADV00498.1| glutamate racemase [Alicycliphilus denitrificans BC] gi|329309677|gb|AEB84092.1| glutamate racemase [Alicycliphilus denitrificans K601] Length = 287 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 13/271 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72 I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ + +++R + + + Sbjct: 8 RPIGVFDSGIGGLSVLQALRHELPHEDFVYLADSGNAPYGDAKGEAFVQQRTLAIARWLR 67 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ V+ACNTA + LR+T P + +G PA+K AAA +Q+ + +L+T T+ Sbjct: 68 AQHGIKALVVACNTATAAAVERLRATLPDLPAIGVEPALKPAAARSQTHHVGVLATRGTV 127 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCF----- 184 + L + ++ + + LA +E E +I+ Sbjct: 128 SSARFARLHDEHGARTRFAVQACDGLARAIEQSTEEPLPATESATKIRALCARYTGALGR 187 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR- 243 + D +VL CTHY R L V LD ++AR+ R +L + Sbjct: 188 FGLKTGDIDTLVLGCTHYVFAKDALRDLVGPDVQILDTGAAVARQTRRILAQAGALAHER 247 Query: 244 ---VFDDHALFLSGKPDIAMRRLMQGFGLKS 271 L+ +G+ + L + Sbjct: 248 PGAPPGGIRLYTTGQLGALQAAAGRWLQLPA 278 >gi|308047962|ref|YP_003911528.1| glutamate racemase [Ferrimonas balearica DSM 9799] gi|307630152|gb|ADN74454.1| glutamate racemase [Ferrimonas balearica DSM 9799] Length = 258 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 127/258 (49%), Gaps = 8/258 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL + Q +R +P + Y+AD+ FPYG L + + L + Sbjct: 2 GAILLFDSGLGGLTIYQHIRQALPNRRYRYLADNARFPYGELAPDELVQGCVDLIRAQMA 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACN+A TL+ + LR+ +G VPAIK AAA + +I +L+TP T+R Sbjct: 62 EEPIDLVVIACNSASTLVLEPLRAAIDC-PVVGVVPAIKPAAAMSHRKVIGLLATPGTVR 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT L + + C + + S L E+ G + + +E E ++ D Sbjct: 121 RPYTDELAAQFAADCELVRLGSSELVWLAEQKLAGQPVSCSQ----LEPILGEFLQRQPD 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 V+VL CTH+PL+ Q+ V +D+ +IARR LL + + F + Sbjct: 177 VVVLGCTHFPLLREEIGQVLGPQVRLIDSGAAIARRVSQLLG--GEEKEGAVFAASFFHT 234 Query: 254 GK-PDIAMRRLMQGFGLK 270 G+ P + ++ G Sbjct: 235 GEAPAPSATVYLREQGFS 252 >gi|150014924|ref|YP_001307178.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052] gi|149901389|gb|ABR32222.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052] Length = 284 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 5/243 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I FDSG+GGL V+++ +MP +FIY D PYG + ++ + +L K Sbjct: 32 PIGFFDSGVGGLSVMREAISIMPNENFIYFGDSKNAPYGIKKVIEVRDLTIDAVEFLLSK 91 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 VIACNTA + +E+RS + ++ +G PA+K A + G I I++TP TLR Sbjct: 92 -NVKAVVIACNTATSAAIEEIRSKYKQISIIGIEPALKPAVKLNRKGQIIIMATPMTLRE 150 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ Y ++ I + L +E+ ++ ++++ ++ F Sbjct: 151 KKFKLLMDKYKNEADIISLPCAGLVEFIEQGI----VEGEDLEYYLKEKFKGYLDNDISS 206 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 IVL CTHYP I + + +D A+ + L + + Sbjct: 207 IVLGCTHYPFIKKALSNVIGKEIPLIDGGFGTAQELKRKLIESGLLNDSKEKGNIEICNS 266 Query: 255 KPD 257 D Sbjct: 267 IND 269 >gi|294649135|ref|ZP_06726577.1| glutamate racemase [Acinetobacter haemolyticus ATCC 19194] gi|292825018|gb|EFF83779.1| glutamate racemase [Acinetobacter haemolyticus ATCC 19194] Length = 295 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 11/265 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSGIGGL + Q++ +P +Y AD PYG D ++ Sbjct: 16 QASADAPIGIFDSGIGGLSIAQEIALHLPNERILYYADTAHVPYGARSDQEIRNLTAQAI 75 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILS 127 + L + ++V+ACNTA D LR + +G VPA+K A TQ+ ++++L+ Sbjct: 76 -EWLYRQGCKVAVVACNTASAFSLDYLRDHYGERFPIIGLVPALKPAVIQTQTKVVAVLA 134 Query: 128 TPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 TPAT R +++ ++ + + V+++ L VE + K ++ Sbjct: 135 TPATFRGRLIKDVMLNFAEPAGVKVLTVTNLALVPFVEAGEQ----MSEACKAVLKQILQ 190 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 + D +VL CTHYP + RQ+ + +D+ ++AR+ +L + ++ Sbjct: 191 PVIEQGADFLVLGCTHYPFLKPAIRQVFDEKLKLIDSGQAVARQTAYILIKNGLLFDKIR 250 Query: 246 DDH---ALFLSGKPDIAMRRLMQGF 267 + F+SG + ++Q Sbjct: 251 HNVSRIECFVSGNNAAVLEPVLQHL 275 >gi|303326014|ref|ZP_07356457.1| glutamate racemase [Desulfovibrio sp. 3_1_syn3] gi|302863930|gb|EFL86861.1| glutamate racemase [Desulfovibrio sp. 3_1_syn3] Length = 276 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 4/257 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + +FDSG+GGL VL+ + +P +Y+ D PYG + + + ++D+ Sbjct: 8 PVALFDSGVGGLTVLKALADRLPGEDLLYLGDTARLPYGTKGRETITRYTLLAARKLVDR 67 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA LR F + +G V P + AA +++G I +++T AT+ Sbjct: 68 GA-KMLVVACNTATAAALPALREHFAPLPVVGVVEPGARAAARTSRNGEIVVIATEATIT 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRT 192 I + H+ + + EE + E ++ +E F R Sbjct: 127 GGAYQQAITRIRPEAHVRGRACTLFVPMAEEGWMDGPLVEGIARRYLEDMFTPAVTAPRP 186 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251 D ++L CTH+PL+ + + V +D++ + A L R++ +T Sbjct: 187 DTLLLGCTHFPLLQAALQNVVGPQVRIVDSAATTAESVEEELTRLDLLRTDEHTGVRRFM 246 Query: 252 LSGKPDIAMRRLMQGFG 268 + + R G Sbjct: 247 TTDNRERFARTGGHFLG 263 >gi|241762044|ref|ZP_04760128.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373510|gb|EER63097.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 276 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 84/226 (37%), Positives = 128/226 (56%), Gaps = 1/226 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L + Sbjct: 1 MSRPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R+ Y +L + S C + S L + E G K + E++ + EG + Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDQ 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L ++ Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYLADQL 225 >gi|11386951|sp|Q9RU10|MURI_DEIRA RecName: Full=Glutamate racemase Length = 290 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 8/252 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG GGL VL +++ +P+ +Y+AD PYG D ++ ++++ + Sbjct: 19 PIGVFDSGAGGLSVLAELQRALPQEDVLYLADTAHVPYGARSDEDIRDLTARAVAELVRR 78 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA LR F + +G VPA+K A A T+SG++ +L+TP TLR Sbjct: 79 G-VKAVVVACNTASAFSLTHLRERF-ELPIIGLVPAVKPAVAATKSGVVGVLATPGTLRG 136 Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 T +++I + + + S L VE E + + Sbjct: 137 TLLADVIRQWAEPAGVRVMQAVSTELVPLVEAGKA----DSPEARVVLRDVLEPLAEAGA 192 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP + R +D+ ++AR R +L R + +L Sbjct: 193 DQLVLGCTHYPFLAGSIRAEFGDTFALVDSGAAVARHTRNVLSRGGLLRGGDRTGEVSYL 252 Query: 253 SGKPDIAMRRLM 264 + +R L+ Sbjct: 253 TTSDPAHLRALL 264 >gi|238754700|ref|ZP_04616052.1| Glutamate racemase [Yersinia ruckeri ATCC 29473] gi|238707008|gb|EEP99373.1| Glutamate racemase [Yersinia ruckeri ATCC 29473] Length = 248 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 78/244 (31%), Positives = 130/244 (53%), Gaps = 4/244 (1%) Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88 Q++R L+P+ H+IY D+V FPYG + + +R++ + + + ++ + VIACNTA Sbjct: 2 YQEIRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQQHPLAIVVIACNTAS 61 Query: 89 TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148 T+ LR F S +G VPAIK AA T++G++ +L+T AT+ R+YT +LI + + C Sbjct: 62 TVSLPALRERF-SFPVVGVVPAIKPAARLTRNGVVGLLATRATVHRSYTLDLIARFATDC 120 Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208 I L+ S L E G ++ +KK + +E D +VL CTH+PL+ Sbjct: 121 KIELLGSSELVELAETKLHGGEVSLSVLKKILNPWLSMREP--PDTVVLGCTHFPLLAEE 178 Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGF 267 Q+ P +D+ +IARR L+ + D+ A L+ A+ ++QG+ Sbjct: 179 LAQVLPEGTRMVDSGAAIARRTAWLISSQENVISTQEDNVAYCLTLDAGTDALLPVLQGY 238 Query: 268 GLKS 271 G + Sbjct: 239 GFPT 242 >gi|329919573|ref|ZP_08276562.1| glutamate racemase [Lactobacillus iners SPIN 1401G] gi|328937378|gb|EGG33800.1| glutamate racemase [Lactobacillus iners SPIN 1401G] Length = 261 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 109/266 (40%), Gaps = 19/266 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ + Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L K + + CNTA ++ P M +G + A+ TQ+ Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEI 180 +++++T AT+ I +Q + + LA VE DEIK + Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN------PSDEIKMAVV 164 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 C + + D ++L CTHYPL++ + +D +D +A+ +L R N Sbjct: 165 AQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLL 224 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQG 266 + H + +G P M+ + Sbjct: 225 AEK-GGKHEYYTTGDPIKFMKIAQKW 249 >gi|325859706|ref|ZP_08172836.1| glutamate racemase [Prevotella denticola CRIS 18C-A] gi|325482632|gb|EGC85635.1| glutamate racemase [Prevotella denticola CRIS 18C-A] Length = 279 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + + Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGSRSFDIVYQFTRQAVMKLF- 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ CNTA ++ P+ LG + P + T+S + +L+ Sbjct: 68 GLGCQLVILGCNTASAKALRTIQQNDLPALDPNRRVLGVIRPTAEIIGRLTRSRHVGLLA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+R + I + V + +E + +KK I+ I + Sbjct: 128 TEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH--IMR 185 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + D ++L CTHYP+++ + P V + + +A R L R R Sbjct: 186 IDPQIDSLILGCTHYPILMPKILKHVPRGVRIIPQGEYVAESLRDYLRRHPDMDARCTKQ 245 Query: 246 DDHALFLSGKPDIAMR 261 + P+ Sbjct: 246 STVKYLTTENPEKFKE 261 >gi|307564832|ref|ZP_07627360.1| glutamate racemase [Prevotella amnii CRIS 21A-A] gi|307346554|gb|EFN91863.1| glutamate racemase [Prevotella amnii CRIS 21A-A] Length = 278 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L ++ L+PEY +IY+ D+ PYG+ + + + D Sbjct: 8 GPIGVFDSGYGGLTILHAIQKLLPEYDYIYLGDNARAPYGSRSFDVVYEFTRQAVLKLFD 67 Query: 74 KYQPVLSVIACNTAFTLIKDEL-RSTFPSM----AFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ CNTA + R+ P + LG + P + T S I IL+ Sbjct: 68 -MGCSLVILGCNTASAKALRTIQRNDLPVIAPDNRVLGVIRPTAEVVGLLTHSNHIGILA 126 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+R + I + + ++ + +E + +KK IE I + Sbjct: 127 TEGTVRSKSYNIEIQKLWPKISVTGIACPLWVPIIENNEADSPGADYFVKKRIEH--IMR 184 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + D I+L CTHYP+++ + + + +A+ + L R + Sbjct: 185 LDPQIDTIILGCTHYPILMPKILKHINKGIKIVAQGKYVAQSLKDYLYRHPEMDKKCTKQ 244 Query: 246 DDHALFLSGKPDIAMR 261 + + P Sbjct: 245 GTTKYYTTENPSKFTE 260 >gi|260752377|ref|YP_003225270.1| glutamate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551740|gb|ACV74686.1| glutamate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 276 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 85/226 (37%), Positives = 130/226 (57%), Gaps = 1/226 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L + Sbjct: 1 MSHPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R+ Y +L + S C + S L + E G K ++E++ + EG R Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYREELDRLLQQPEGDR 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L ++ Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYLADQL 225 >gi|209521399|ref|ZP_03270111.1| glutamate racemase [Burkholderia sp. H160] gi|209498175|gb|EDZ98318.1| glutamate racemase [Burkholderia sp. H160] Length = 295 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 106/246 (43%), Gaps = 9/246 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I IFDSG+GGL VL+ +R +P +YVAD + PYG +D + R + + + Sbjct: 20 QAPIGIFDSGLGGLSVLRAVRAQLPAEALLYVADSLYAPYGERDDDFITDRTLAIGEWLA 79 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + VL V+ACNTA +R P + +G P +K AA ++S + +L+T ATL Sbjct: 80 AQGAKVL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKSRVAGVLATQATL 137 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ Y + C L VE + E++ + Sbjct: 138 RSARFQGLLERYAADCRFLCQPGHGLVQAVER----CDVGSAELRALLRSYLEPMLDAGA 193 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---A 249 D +VL CTHYP + R + + +D S +IAR+ +L + Sbjct: 194 DTLVLGCTHYPFLDAAIRDIVGERLTLIDTSVAIARQLERVLQQHGLRAATPATSTPLPR 253 Query: 250 LFLSGK 255 + + Sbjct: 254 FYSTDD 259 >gi|226951878|ref|ZP_03822342.1| glutamate racemase [Acinetobacter sp. ATCC 27244] gi|226837418|gb|EEH69801.1| glutamate racemase [Acinetobacter sp. ATCC 27244] Length = 295 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 11/265 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSGIGGL + Q++ +P +Y AD PYG D ++ Sbjct: 16 QASADAPIGIFDSGIGGLSIAQEIALHLPNERILYYADTAHVPYGARSDQEIRNLTAQAI 75 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILS 127 + L + ++V+ACNTA D LR + +G VPA+K A TQ+ ++++L+ Sbjct: 76 -EWLYRQGCKVAVVACNTASAFSLDYLRDHYGERFPIIGLVPALKPAVIQTQTKVVAVLA 134 Query: 128 TPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 TPAT R +++ ++ + + V+++ L VE + K ++ Sbjct: 135 TPATFRGRLIKDVMLNFAEPAGVKVLTVTNLALVPFVEAGEQ----MSEACKAVLKQILQ 190 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 + D +VL CTHYP + RQ+ + +D+ ++AR+ +L + ++ Sbjct: 191 PVIEQGADFLVLGCTHYPFLKPAIRQVFDEKLKLIDSGQAVARQTAYILIKNGLLFDKIR 250 Query: 246 DDH---ALFLSGKPDIAMRRLMQGF 267 + F+SG + ++Q Sbjct: 251 HNVSRIECFVSGNNAAVLEPVLQHL 275 >gi|261337748|ref|ZP_05965632.1| glutamate racemase [Bifidobacterium gallicum DSM 20093] gi|270277201|gb|EFA23055.1| glutamate racemase [Bifidobacterium gallicum DSM 20093] Length = 258 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 100/257 (38%), Gaps = 7/257 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V++++R +P H +Y D PYG +++ + + + Sbjct: 4 SAPIGVFDSGLGGLSVVRQIREDLPNEHVLYFGDSAHAPYGVKTPDEVRELSFGIVDNFV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL--ISILSTPA 130 + VIACNTA + +ELR T+ + +G PA+K A Q I + +T Sbjct: 64 -RQGAKAIVIACNTATSAAVNELRDTY-DVPIIGMEPALKVAVDRGQGQRQNIIVAATEL 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR L+ + + IH + L VE + + + + Sbjct: 122 TLRERKFEQLMQRFEADHTIHRLPCPDLVEIVEHGQLD---DTALVDATLRRYLHDYDLD 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D IVL CTH+ F+++ P +D + A R +L + Sbjct: 179 TIDAIVLGCTHFVFYRDAFQRIVPEHTAIIDGNAGTAHHLRVVLESLGALAPEDQQGGVS 238 Query: 251 FLSGKPDIAMRRLMQGF 267 + M L Sbjct: 239 VTNSDTSAQMANLAHKL 255 >gi|309805303|ref|ZP_07699354.1| glutamate racemase [Lactobacillus iners LactinV 09V1-c] gi|312875202|ref|ZP_07735215.1| glutamate racemase [Lactobacillus iners LEAF 2053A-b] gi|308165379|gb|EFO67611.1| glutamate racemase [Lactobacillus iners LactinV 09V1-c] gi|311089309|gb|EFQ47740.1| glutamate racemase [Lactobacillus iners LEAF 2053A-b] Length = 261 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 19/266 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ + Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L K + + CNTA ++ P M +G + A+ TQ+ Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-I 180 +++++T AT+ I +Q + + LA VE DEIKK + Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN------PSDEIKKAVV 164 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 C + + D ++L CTHYPL++ + +D +D +A+ +L R N Sbjct: 165 AQCLAPLKHVQYDTLILGCTHYPLLIREIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLL 224 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQG 266 + H + +G P M+ + Sbjct: 225 AAK-GGKHEYYTTGDPIKFMKIAQKW 249 >gi|333029733|ref|ZP_08457794.1| Glutamate racemase [Bacteroides coprosuis DSM 18011] gi|332740330|gb|EGJ70812.1| Glutamate racemase [Bacteroides coprosuis DSM 18011] Length = 279 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 99/260 (38%), Gaps = 11/260 (4%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 K I +FDSG GGL +L+K+R +PEY +IY+ D+ PYG + K + Sbjct: 5 SKRPGPIGVFDSGYGGLTILEKIRKKLPEYDYIYLGDNARAPYGTRSFELVYKFTLQAVK 64 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123 + ++ L ++ACNTA ++ P LG + P ++ T S I Sbjct: 65 HLFEEG-CHLVILACNTASAKALRSIQQNDLPLLDPQRRVLGVIRPTVESINELTISNHI 123 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++T T++ + + + + VE + +K+ I+ Sbjct: 124 GVVATLGTIKSESYPLELAKLFPHIKVSGEACPMWVPLVENNEFDTPGADYFVKQSIDNL 183 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQ 241 ++ D I+L CTHYPL+ Q P + + +A+ + L R Sbjct: 184 L--QQDSDIDTILLGCTHYPLLQSKIEQFVPNNIKVIAQGQYVAKSLQNYLERHPEIDRN 241 Query: 242 TRVFDDHALFLSGKPDIAMR 261 + D Sbjct: 242 CTKEGRCRFLTTEAVDKFKE 261 >gi|298373442|ref|ZP_06983431.1| glutamate racemase [Bacteroidetes oral taxon 274 str. F0058] gi|298274494|gb|EFI16046.1| glutamate racemase [Bacteroidetes oral taxon 274 str. F0058] Length = 282 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 92/246 (37%), Gaps = 11/246 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL+ + +P+Y ++Y+ D+ PYG + + + D Sbjct: 14 IGVFDSGYGGLTVLKDIIEQLPQYDYVYLGDNARTPYGTRSYEVVYGYTLQCVRRLFD-M 72 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 + ++ACNTA ++ P LG + P + + T++ + IL T Sbjct: 73 DCRIVILACNTASAKALRSIQQNDLPLIAPDRRVLGVIRPTAESIGSLTKTNTVGILGTT 132 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+R I + + + +E + IKK I+ + Sbjct: 133 GTIRSQSYEIEIKKLFPRIEVVSQECPMWVPLIENNEHLTAGADYFIKKYIDSILA--KN 190 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDD 247 D +VL CTHYPLI + P + + +A L R + Sbjct: 191 NNIDTLVLGCTHYPLIADSIARFVPEGIRIVHQGAIVAASLDDYLHRHPEQEQYCSKGST 250 Query: 248 HALFLS 253 + + Sbjct: 251 VEFYTT 256 >gi|330817737|ref|YP_004361442.1| Glutamate racemase [Burkholderia gladioli BSR3] gi|327370130|gb|AEA61486.1| Glutamate racemase [Burkholderia gladioli BSR3] Length = 288 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 8/254 (3%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D + + IFDSG+GGL VL+ +R +P+ F+YVAD PYG +D + +R Sbjct: 6 DFASEDSTTAAPVGIFDSGLGGLSVLRAVRAQLPDESFVYVADSRHAPYGERDDAFIIER 65 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 + + + + L V+ACNTA +R T ++ +G P IK A ++S + Sbjct: 66 TLAIGEWLAARGAKAL-VVACNTATAQSIAVVRETL-AIPLVGVEPGIKPATLASRSRVA 123 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T ATLR +LI Y + C L +E G ++ ++G Sbjct: 124 GVLATAATLRSARFESLIERYAADCRFLRQPGHGLVEAIERGDTG----SPALRALLDGY 179 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT- 242 D +VL CTHYP + R+L+ + +D S++IAR+ +L Sbjct: 180 LEPMLAAGADTLVLGCTHYPFLDATIRELTQDRLTLIDTSEAIARQLARVLEDHGLRAPA 239 Query: 243 -RVFDDHALFLSGK 255 L+ + Sbjct: 240 GTAARPPRLYSTDD 253 >gi|281421511|ref|ZP_06252510.1| glutamate racemase [Prevotella copri DSM 18205] gi|281404583|gb|EFB35263.1| glutamate racemase [Prevotella copri DSM 18205] Length = 278 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 107/261 (40%), Gaps = 10/261 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L +R MP+Y ++Y+ D+ PYG+ + K + Sbjct: 8 GPIGVFDSGYGGLTILHGLRQTMPQYDYMYLGDNARAPYGSRSFEVVYKFTRQAVLKLFS 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ CNTA L+ PS LG + P + T+S + +L+ Sbjct: 68 -MGCHLVILGCNTASAKALRSLQQRDIPELDPSRRVLGIIRPTAEVIGTITKSNHVGLLA 126 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ + I + + V+ + A+ VE + +KK I+ + Sbjct: 127 TEGTIKSQSYNMEISKLWPEIQVSGVACPLWAAIVEANEADSPGADYFVKKRIDQ--LML 184 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD- 246 + D I+L CTHYPL++ + P V + +A + L R + + Sbjct: 185 KDADIDTIILGCTHYPLLMSSIVKNLPDGVRVVPQGQYVANSLKDYLNRHPQMEQMITKT 244 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 +L+ + + + Q F Sbjct: 245 GSCRYLTTESEDKFKESAQIF 265 >gi|315635708|ref|ZP_07890971.1| glutamate racemase [Arcobacter butzleri JV22] gi|315480005|gb|EFU70675.1| glutamate racemase [Arcobacter butzleri JV22] Length = 261 Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 6/228 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL VL+ + ++ Y+AD PYG + + KR + + +L +Y Sbjct: 3 VGVFDSGLGGLTVLKSILKVLKNAEIFYIADTAYAPYGEKDSALILKRCEDITNYLLKEY 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + ++ACNTA + LR F S+ +G P IK A T+S I IL+TP+TL+ Sbjct: 63 KIDALIVACNTATSAAIKHLRENFSSLIVIGTEPGIKPAILNTKSSNIGILATPSTLKSD 122 Query: 136 YTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L++ S + + LA ++E+ +I K +E I + + D Sbjct: 123 KYQLLVNELSSIKKVNLFEQACPGLAMQIEKG----EINTLTTYKMLEEWLIPMKEENVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 IVL CTHYPLI +++ + + D+IA+R L Sbjct: 179 TIVLGCTHYPLISQTIKKIMGEDITLIQTGDAIAKRLLSLSEEKGHKN 226 >gi|158321093|ref|YP_001513600.1| glutamate racemase [Alkaliphilus oremlandii OhILAs] gi|158141292|gb|ABW19604.1| glutamate racemase [Alkaliphilus oremlandii OhILAs] Length = 274 Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 6/228 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG+GG+ VL + +P +IY D PYG +KK + +L Sbjct: 9 PIGVFDSGVGGISVLADLIHQLPNEQYIYFGDSGNAPYGVRSKEEVKKLSFNVVDKLL-N 67 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V+ACNTA +++ +ELR + +G PA+K A G I +++TP TLR Sbjct: 68 FNIKAVVVACNTATSIVIEELRKRL-DIPVIGMEPALKPAIELNNFGKIVVMATPVTLRE 126 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 ++LI + + L +E+ + EI+ I + + Sbjct: 127 KKFNDLIMKLTDTDRVVKMPCPGLVEIIEQQ----GDHDAEIEAYIRRIYASYQLDTVGT 182 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 +VL CTHY I + ++ +D + AR + LL + T Sbjct: 183 VVLGCTHYVFIKDMIAKVVGPEATVIDGNFGTARHVKELLKQSEALNT 230 >gi|327312842|ref|YP_004328279.1| glutamate racemase [Prevotella denticola F0289] gi|326944421|gb|AEA20306.1| glutamate racemase [Prevotella denticola F0289] Length = 279 Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 11/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + + Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGSRSFDIVYQFTRQAVMKLF- 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ CNTA ++ P LG + P + T+S + +L+ Sbjct: 68 GLGCQLVILGCNTASAKALRTIQQNDLPALDPDRRVLGVIRPTAEIIGRLTRSRHVGLLA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+R + I + V + +E + +KK I+ I + Sbjct: 128 TEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH--IMR 185 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + D ++L CTHYP+++ + P V + + +A R L R R Sbjct: 186 IDPQIDCLILGCTHYPILMPKILKHVPCGVRIIPQGEYVAESLRDYLRRHPDMDARCTKQ 245 Query: 246 DDHALFLSGKPDIAMR 261 + P+ Sbjct: 246 STVKYLTTENPEKFKE 261 >gi|149192517|ref|ZP_01870697.1| glutamate racemase [Vibrio shilonii AK1] gi|148833649|gb|EDL50706.1| glutamate racemase [Vibrio shilonii AK1] Length = 266 Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 11/257 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +ILIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R L ++ Sbjct: 3 RKNILIFDSGVGGLSVFKEIVQRLPQENYIYLFDNEAYPYGELAPETLVNRTCTLIQQMM 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + VIACNTA T++ LR + +G VPAIK A+ +++ + +++TPAT+ Sbjct: 63 RRKAVDIVVIACNTASTIVLPHLRKRI-DIPVVGVVPAIKPASLLSKT-AVGLIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT +LI ++ + + L+ L E+ ++ E+ + + Sbjct: 121 TRQYTHDLIRNFATDKEVKLIGDSRLVEMAEQKLRNEQVDLQEL-----ELILSPIKGKI 175 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV VL CTH+PLI + V+ +D+ +IARR LL + F Sbjct: 176 DVAVLGCTHFPLIKEEIALVLGDCVELVDSGAAIARRVESLLEIKE--ASLGQGTMEAFS 233 Query: 253 SGKP--DIAMRRLMQGF 267 S P + A+ + ++ Sbjct: 234 SAPPFEEEALNKTLRQL 250 >gi|170782455|ref|YP_001710788.1| glutamate racemase [Clavibacter michiganensis subsp. sepedonicus] gi|169157024|emb|CAQ02197.1| glutamate racemase 1 [Clavibacter michiganensis subsp. sepedonicus] Length = 294 Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 92/239 (38%), Gaps = 6/239 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + L+P IY+ D PYG+ +++ + + D++ Sbjct: 3 DAPIGIFDSGVGGLTVARAVAALLPRESIIYIGDTAHTPYGDKPIADVRRYALAVLDDLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA + + R + PA++ A + T++ + +++T AT+ Sbjct: 63 ERG-VKMLVIACNTASAAMLRDARERYDIPVVEVIQPAVRTAVSVTRNHRVGVIATHATV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + VE E+ EG Sbjct: 122 TSRAYDDAFAA-APHLALTSAEAPDFVGFVERGETSGP----ELMSAAEGYLAPLRAAGV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHYP + + V + + A+ L + + Sbjct: 177 DTLVLGCTHYPFLEGAISLIMGPDVTLVSSDTETAKDVYRELVSAGLERRSDAPPVIRY 235 >gi|114331729|ref|YP_747951.1| glutamate racemase [Nitrosomonas eutropha C91] gi|114308743|gb|ABI59986.1| glutamate racemase [Nitrosomonas eutropha C91] Length = 268 Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 8/254 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN + IFDSGIGGL V +K+R L+P +YVAD + PYG D+ + + Sbjct: 1 MDNKYIASF--GPVGIFDSGIGGLSVARKIRELLPSEDMVYVADSLHAPYGEKSDNYIFQ 58 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R+ + +L + V+ACNTA T LR+ +P + +G P IK AA T +G+ Sbjct: 59 RMGAVTEFLLARKA-KAVVVACNTATTAAISRLRACYP-IPIVGVEPGIKPAALSTHTGV 116 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+TP TL+ + L + I + L +++E + D+ ++ Sbjct: 117 IGVLATPRTLQTNSFTALAERFARNVRIEIQPCPDLVTKIEA----LNFNSDQTIALLKQ 172 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 K D IVL CTHY + + +++ + + ++A+ L Sbjct: 173 YISPLLDKGADTIVLGCTHYNHLSELISKVAGENISIIKTDAAVAKEVARRLSSGGLLAG 232 Query: 243 RVFDDHALFLSGKP 256 F + P Sbjct: 233 GDHAGSEEFWTSGP 246 >gi|170718701|ref|YP_001783892.1| glutamate racemase [Haemophilus somnus 2336] gi|189030361|sp|B0URZ3|MURI_HAES2 RecName: Full=Glutamate racemase gi|168826830|gb|ACA32201.1| glutamate racemase [Haemophilus somnus 2336] Length = 267 Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 4/241 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +IL FDSG+GGL V ++ + L+P+ H++Y D+ FPY ++ + R + + I Sbjct: 5 IQPTILFFDSGVGGLSVYKETKQLLPDCHYLYGFDNGFFPYSEKDEKDIIDRTLRICQKI 64 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 Y L VIACNTA T++ ELR F S+ +G VPAIK AA +++ I +++T T Sbjct: 65 NQTYPLDLIVIACNTASTVVLPELRRNF-SIPIVGTVPAIKPAAEMSETKHIGLIATKGT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++RTY ++LI +Y C + + S L E+ G ++ + +K+E+ K K Sbjct: 124 IKRTYVNDLIKNYAYHCMVEKIGSTKLVEIAEQKLRGGEVDLNVLKQELSPW---KTMKS 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PLI P ++ + +IA+R + LL I + Sbjct: 181 LDSVVLGCTHFPLIKEEIECCLPQVKFFVSSGKAIAKRVKFLLKGIEVRSKIQKKNLIFC 240 Query: 252 L 252 Sbjct: 241 T 241 >gi|309803584|ref|ZP_07697676.1| glutamate racemase [Lactobacillus iners LactinV 11V1-d] gi|309806029|ref|ZP_07700055.1| glutamate racemase [Lactobacillus iners LactinV 03V1-b] gi|312872868|ref|ZP_07732930.1| glutamate racemase [Lactobacillus iners LEAF 2062A-h1] gi|312873716|ref|ZP_07733761.1| glutamate racemase [Lactobacillus iners LEAF 2052A-d] gi|325913753|ref|ZP_08176114.1| glutamate racemase [Lactobacillus iners UPII 60-B] gi|308164332|gb|EFO66587.1| glutamate racemase [Lactobacillus iners LactinV 11V1-d] gi|308167632|gb|EFO69785.1| glutamate racemase [Lactobacillus iners LactinV 03V1-b] gi|311090714|gb|EFQ49113.1| glutamate racemase [Lactobacillus iners LEAF 2052A-d] gi|311091602|gb|EFQ49984.1| glutamate racemase [Lactobacillus iners LEAF 2062A-h1] gi|325476953|gb|EGC80104.1| glutamate racemase [Lactobacillus iners UPII 60-B] Length = 261 Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 17/265 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ + Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L K + + CNTA ++ P M +G + A+ TQ+ Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++++T AT+ I +Q + + LA VE K + Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEANPSDKIK-----KAVVA 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 C + + D ++L CTHYPL++ + +D +D +A+ +L R N Sbjct: 166 QCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLA 225 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQG 266 + H + +G P M+ + Sbjct: 226 EK-GGKHEYYTTGDPIKFMKIAQKW 249 >gi|15896495|ref|NP_349844.1| glutamate racemase [Clostridium acetobutylicum ATCC 824] gi|20177983|sp|Q97E66|MURI_CLOAB RecName: Full=Glutamate racemase gi|15026324|gb|AAK81184.1|AE007821_1 Possible glutamate racemase [Clostridium acetobutylicum ATCC 824] gi|325510654|gb|ADZ22290.1| glutamate racemase [Clostridium acetobutylicum EA 2018] Length = 256 Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 6/229 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I + DSG+GG+ VL++ +P +FIY D PYG ++ + +L Sbjct: 5 NNPIGVIDSGVGGISVLKEAVKQLPYENFIYYGDSKNAPYGIKSVDEVRNLTFNVVEKLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K V+ACNTA + DELR + ++ +G PA+K A + G I I++TP TL Sbjct: 65 -KLNIKALVVACNTATSAAIDELREKYKNIPVIGIEPALKPAVELKRRGKIIIMATPMTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 NL+ Y I + L +E+ ++ +++++ + F + E Sbjct: 124 SEVKFKNLMEKYEKDSEIVKLPCPGLVELIEDGI----VEGEKMQEYLRNKFKDYEKDDI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 VL CTHYP + ++ V +D S + + L + + Sbjct: 180 AAFVLGCTHYPFVKKEIASIA-RDVPIIDGSQGTVMQLKRKLDKYDILN 227 >gi|217969659|ref|YP_002354893.1| glutamate racemase [Thauera sp. MZ1T] gi|217506986|gb|ACK53997.1| glutamate racemase [Thauera sp. MZ1T] Length = 268 Score = 267 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 7/257 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL V++ + +P +Y D PYG ++ + +L Sbjct: 6 RPIGVFDSGVGGLTVVRALMERLPLEDIVYFGDTARVPYGVKSVATIEHFTAQITEFLLQ 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPATL 132 + + +IACNT + D + + L + + A A + I ++ TP T+ Sbjct: 66 R-DVKMLIIACNTMAAVAADVVHRLAAGIPVLDVIEAGARAAVAASPGRRIGVIGTPTTI 124 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +H ++ + + VEE ++ ++ + E Sbjct: 125 NSNAYARRMHELDPAVRVYSQACPLFVPLVEEGWLDHEVTRLTAQEYLRPVLAE----EV 180 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251 D +VL CTHYPL+ + R ++ V +D++ + A A L + D+ Sbjct: 181 DSLVLGCTHYPLLKPLLRDVAGARVRLIDSALTTAELAAERLQLSGLARGGGGVADYRFV 240 Query: 252 LSGKPDIAMRRLMQGFG 268 +S P + G Sbjct: 241 VSDVPLRFQTIGERFLG 257 >gi|7387915|sp|P56868|MURI_AQUPY RecName: Full=Glutamate racemase gi|6707573|gb|AAF25672.1|AF212972_1 glutamate racemase [Aquifex pyrophilus] Length = 254 Score = 267 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 15/239 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R + +Y+ D PYG + + + + DK Sbjct: 3 IGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA + L+ F P +K+A +++ I ++ TPAT++ Sbjct: 63 -VDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + + + EE +I +K +E E +GK D + Sbjct: 122 AYQRKLEE--GGADVFAKACPLFVPLAEEGLLEGEIT----RKVVEHYLKEFKGK-IDTL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +L CTHYPL+ ++ V+ +D+S++++ L N + LF + Sbjct: 175 ILGCTHYPLLKKEIKKFLG-DVEVVDSSEALS------LSLHNFIKDDGSSSLELFFTD 226 >gi|315653048|ref|ZP_07905976.1| glutamate racemase [Lactobacillus iners ATCC 55195] gi|315489583|gb|EFU79217.1| glutamate racemase [Lactobacillus iners ATCC 55195] Length = 261 Score = 267 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 17/265 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ + Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L K + + CNTA ++ P M +G + A+ TQ+ Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++++T AT+ I +Q + + LA VE K + Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEANPSDKIK-----KAVVA 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 C + + D ++L CTHYPL++ + +D +D +A+ +L R N Sbjct: 166 QCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLL- 224 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQG 266 H + +G P M+ + Sbjct: 225 GEKGGKHEYYTTGDPIKFMKIAQKW 249 >gi|259501297|ref|ZP_05744199.1| glutamate racemase [Lactobacillus iners DSM 13335] gi|302190979|ref|ZP_07267233.1| glutamate racemase [Lactobacillus iners AB-1] gi|312870760|ref|ZP_07730867.1| glutamate racemase [Lactobacillus iners LEAF 3008A-a] gi|259167267|gb|EEW51762.1| glutamate racemase [Lactobacillus iners DSM 13335] gi|311093772|gb|EFQ52109.1| glutamate racemase [Lactobacillus iners LEAF 3008A-a] Length = 261 Score = 267 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 17/265 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ + Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L K + + CNTA ++ P M +G + A+ TQ+ Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++++T AT+ I +Q + + LA VE K + Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEANPSDKIK-----KAVVA 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 C + + D ++L CTHYPL++ + +D +D +A+ +L R N Sbjct: 166 QCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLA 225 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQG 266 + H + +G P M+ + Sbjct: 226 AK-GGKHEYYTTGDPIKFMKIAQKW 249 >gi|284037266|ref|YP_003387196.1| glutamate racemase [Spirosoma linguale DSM 74] gi|283816559|gb|ADB38397.1| glutamate racemase [Spirosoma linguale DSM 74] Length = 280 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 102/273 (37%), Gaps = 16/273 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 I +FDSG GGL VL+++ +P+Y +IY+ D+ PYG + + Sbjct: 1 MPTPSQPIGVFDSGYGGLTVLREIVKKLPQYDYIYLGDNARTPYGTRSFDTVYHYTLECV 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTF----------PSMAFLGAV-PAIKQAAAY 117 + D+ L ++ACNTA ++ P LG + P + Y Sbjct: 61 QHLFDRG-CRLVILACNTASAKALRNIQQLDLPAQYPGLDGPDRRVLGVIRPTTEVIGTY 119 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 +++G + +L+T T+ I + + + + VE + +K Sbjct: 120 SKTGKVGVLATRGTVTSESYRVEIEKFFPGLGVFQEACPMWVPLVENGEYDSPGADYFVK 179 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 + I+ + D ++LACTHYPL++ + +P L ++ L R Sbjct: 180 QHIDRLLA--QSPDIDTLLLACTHYPLLLEKIKHFAPSGATILSQGGIVSDSLADYLVRH 237 Query: 238 N--THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 Q + + R+ +G Sbjct: 238 PEIEAQCSKHGQRTFLTTDATEDFDRQATIFYG 270 >gi|188587547|ref|YP_001919512.1| glutamate racemase [Clostridium botulinum E3 str. Alaska E43] gi|229486234|sp|B2UX89|MURI_CLOBA RecName: Full=Glutamate racemase gi|188497828|gb|ACD50964.1| glutamate racemase [Clostridium botulinum E3 str. Alaska E43] Length = 258 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 5/233 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I FDSG+GGL V+++ LMP ++IY D PYG ++ Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAIRLMPNENYIYFGDSKNAPYGIKTVEEVRTLTFNAVES 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L+K V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP Sbjct: 63 LLEK-NVKAIVVACNTATSAAIDLVRSKYKNIPIIGIEPALKLATKYNRKGNIIIMATPM 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL+ +L+ Y I + L +E + E+ +K++ + + Sbjct: 122 TLKEKKFKSLMEKYGENYDIVSLPCAKLVEFIEHGILSGEELEEYLKEKFKSY----KNN 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 V+VL CTHYP I ++ + +D ++ R L N T Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTE 230 >gi|145636801|ref|ZP_01792467.1| glutamate racemase [Haemophilus influenzae PittHH] gi|145270099|gb|EDK10036.1| glutamate racemase [Haemophilus influenzae PittHH] Length = 257 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 5/252 (1%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GG + ++ + L+P +H++Y D+ GFPY E+ ++ R + I +Y Sbjct: 3 SGVGGFSIYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAACQLINQRYPLDAI 62 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140 VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T T++R Y L Sbjct: 63 VIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATKGTVKRHYIDEL 121 Query: 141 IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 I + C + + + L E+ G + +K E+ D +VL CT Sbjct: 122 IDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AGMADLDTLVLGCT 178 Query: 201 HYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA- 259 H+PLI + P ++D S +IA+R + LL N + + P+ + Sbjct: 179 HFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQNEKYNQMFCTAHFPEESQ 238 Query: 260 MRRLMQGFGLKS 271 ++ + +G +S Sbjct: 239 FKKALHLWGFES 250 >gi|88799058|ref|ZP_01114639.1| glutamate racemase [Reinekea sp. MED297] gi|88778285|gb|EAR09479.1| glutamate racemase [Reinekea sp. MED297] Length = 257 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 117/256 (45%), Gaps = 12/256 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL +R L+P+ IYVAD PYG+ + + +R + ++++ Sbjct: 2 IGVFDSGLGGLTVLNSIRSLLPDQALIYVADQAYTPYGDQSEATVTQRSREISQWLIEQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA + D+LR F S+ +G P +K AA +++ I IL+T T+ Sbjct: 62 -CQLIVIACNTATAIAIDQLRREF-SVPIVGVEPGVKPAALLSRTRKIGILATENTVASQ 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI +++ + LA +E + I ++ + D + Sbjct: 120 RYQRLIQAFLPNVQVISQGCSGLADAIES-------DPEAIPALLQKYLCPLLDEGVDQV 172 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYPLI QL+ +D SD+IA R LP + D + + Sbjct: 173 VLGCTHYPLIRSQIEQLAGARARVIDTSDAIAMEVRRRLP---AKTSNDVVDVRWYTTKF 229 Query: 256 PDIAMRRLMQGFGLKS 271 RL LK+ Sbjct: 230 DASQAGRLQHYDQLKA 245 >gi|309809660|ref|ZP_07703516.1| glutamate racemase [Lactobacillus iners SPIN 2503V10-D] gi|308170020|gb|EFO72057.1| glutamate racemase [Lactobacillus iners SPIN 2503V10-D] Length = 261 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 19/266 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ + Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L K + + CNTA ++ P M +G + A+ TQ+ Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EI 180 +++++T AT+ I +Q + + LA VE D+IKK + Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN------PSDKIKKVVV 164 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 C + + D ++L CTHYPL++ + +D +D +A+ +L R N Sbjct: 165 AQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLL 224 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQG 266 + H + +G P M+ + Sbjct: 225 AEK-GGKHEYYTTGDPIKFMKIAQKW 249 >gi|170740490|ref|YP_001769145.1| glutamate racemase [Methylobacterium sp. 4-46] gi|168194764|gb|ACA16711.1| glutamate racemase [Methylobacterium sp. 4-46] Length = 290 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 102/252 (40%), Positives = 151/252 (59%), Gaps = 3/252 (1%) Query: 6 YPCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 P + +L+FDSG+GGL VL ++R P+ +Y ADD FPYG+ + L R+ Sbjct: 12 APLAPGPRAPAVLVFDSGLGGLTVLSELRRARPDARIVYAADDAAFPYGDLSEEMLVARV 71 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + + ++ + P L V+ACNTA TL+ LR+ F ++ F+G VPAIK AAA T++G IS Sbjct: 72 VAVMERLVAAHAPDLVVVACNTATTLVLPALRARF-AVPFVGTVPAIKPAAAATRTGRIS 130 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+TP T+RR YT LI +Y C + LV + LA+ E G + +D +++EI CF Sbjct: 131 VLATPGTVRRDYTRELIDAYAGTCAVTLVGATRLAALAEADLAGCPVDDDVLREEIAPCF 190 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTR 243 + + RTDV+VL CTHYPL++ F +L+PWPV W+D + ++ARR LL P Sbjct: 191 VGEGSARTDVVVLGCTHYPLLLARFERLAPWPVTWIDPAPAVARRMAALLGPAPRGTDPE 250 Query: 244 VFDDHALFLSGK 255 A+F G+ Sbjct: 251 ATPGLAVFTGGE 262 >gi|295676105|ref|YP_003604629.1| glutamate racemase [Burkholderia sp. CCGE1002] gi|295435948|gb|ADG15118.1| glutamate racemase [Burkholderia sp. CCGE1002] Length = 295 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 9/245 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + Sbjct: 21 APIGIFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFITDRTLAIGEWLAA 80 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L V+ACNTA +R P + +G P +K AA ++S + +L+T ATLR Sbjct: 81 RGAKAL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKSRVAGVLATQATLR 138 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L+ Y + C L VE + E++ + D Sbjct: 139 SARFQGLLERYAADCRFLCQPGHGLVQAVER----CDVGSAELRALLRSYLQPMLDAGAD 194 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---AL 250 +VL CTHYP + R + + +D S +IAR+ +L + Sbjct: 195 TLVLGCTHYPFLDAAIRDIVGERLALIDTSVAIARQLERVLEQHGLRAATPAASTPLPRF 254 Query: 251 FLSGK 255 + + Sbjct: 255 YSTDD 259 >gi|55981612|ref|YP_144909.1| glutamate racemase [Thermus thermophilus HB8] gi|81600355|sp|Q5SHT7|MURI_THET8 RecName: Full=Glutamate racemase gi|55773025|dbj|BAD71466.1| glutamate racemase [Thermus thermophilus HB8] Length = 257 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 17/260 (6%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I +FDSG+GGL VL+ +R L+P F+Y D PYG +++ + Sbjct: 1 MKDPKAPIGVFDSGVGGLTVLKALRRLLPREEFLYFGDTARVPYGGKPLAMVRRFAWEIA 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +L + V+ACNTA + +L F PA + A + + + ++ T Sbjct: 61 GFLL-RQGVKAIVVACNTASSAALPDLAEDLSVPVFGVVEPAARAARGFRK---VGLIGT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + + + VEE + +D + + ++E Sbjct: 117 QATVESGAYPRYVDLA------WAKACPLFVPLVEEG-----LWDDPVALLVARHYLEDA 165 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 K + ++L CTHYP + + P V LD+++ A+ L Sbjct: 166 PKDLEALILGCTHYPFLKGAIGAVLP-GVALLDSAELTAQEVARALEAEGLLNPEGRGRT 224 Query: 249 ALFLSGKPDIAMRRLMQGFG 268 ++G P+ A R L + G Sbjct: 225 FHLVTGDPE-AYRALAERLG 243 >gi|308270889|emb|CBX27499.1| Glutamate racemase [uncultured Desulfobacterium sp.] Length = 266 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 5/232 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL V++ + +P Y IY D PYG+ + + + +L Sbjct: 7 IGIFDSGIGGLTVVKAVMGKIPGYDIIYFGDTARTPYGSKSSETVIQYAIEDTEFLL-NN 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA ++ D + F F PA++ A ++ I ++ T AT++ Sbjct: 66 GANIIVVACNTASSVATDSIVKKFDVPVFEVITPAVELAVESSRKMSIGVIGTRATVKSC 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 N I + + I+ V+ +L VEE +KK + + K+ D + Sbjct: 126 VYENKIKAINAGAKIYSVACPLLVPLVEEGWINRPETSMIVKKYLHS----LKVKQIDTL 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 +L CTHYPL+ H+ + V+ +D+S +A + L +R+ + Sbjct: 182 ILGCTHYPLLKHIICRKIGKRVNIIDSSLGVADKLEKFLQEHPDIGSRLGKN 233 >gi|227529708|ref|ZP_03959757.1| glutamate racemase [Lactobacillus vaginalis ATCC 49540] gi|227350374|gb|EEJ40665.1| glutamate racemase [Lactobacillus vaginalis ATCC 49540] Length = 266 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 109/253 (43%), Gaps = 15/253 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V++ ++ +P ++V D+ FPYG +++ Sbjct: 1 MDNRP--------IGVMDSGLGGLSVIRVIQQELPNESVVFVGDEGHFPYGTKSQELIRQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 ++ + ++ + L VIACNTA ++ P + +G + AA +++ Sbjct: 53 LVLRIGRFLVAQ-PVKLMVIACNTATAAALSTVQKELP-IPVIGVINPGATAAIESKASR 110 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +++T +T + + + ++ L + VE G E +K ++ Sbjct: 111 IGVIATESTTKDGAYVRELKKLDPHVKVISKATQPLVAIVEHGKTGT----AEAQKTVDQ 166 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + + D ++L CTH+P + + Q V +D + + + LL + Sbjct: 167 QLASFDQEPVDALILGCTHFPFLANEISQKMGKKVKLIDPALETVNQVKKLLTAEHLLAQ 226 Query: 243 RVFDDHALFLSGK 255 + + L+ +G Sbjct: 227 QAV-SYKLYSTGD 238 >gi|192359030|ref|YP_001982653.1| glutamate racemase [Cellvibrio japonicus Ueda107] gi|190685195|gb|ACE82873.1| glutamate racemase [Cellvibrio japonicus Ueda107] Length = 279 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 86/247 (34%), Positives = 132/247 (53%), Gaps = 2/247 (0%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL+FDSG+GGL V Q+++ +P IY +D+ FPYG E+ L R+ + + +L Y Sbjct: 16 ILVFDSGVGGLSVAQEIQASLPGVALIYASDNAAFPYGTKEEGELIARVERVMAALLASY 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA TL LR F ++ F+G VPAIK AA +QSG+I +L+TPAT+ R Sbjct: 76 PVDLVVVACNTASTLTLPHLRQRF-NLPFVGVVPAIKPAAESSQSGVIGLLATPATVARP 134 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT +LI ++ S C + + S L E+ G I + I + ++ D + Sbjct: 135 YTHDLITTHASDCTVISLGSSELVLLAEQKLRGETITDKAIAPITQALLDADGSRQMDRL 194 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALFLSG 254 VLACTH+PL+ + P + +D+ +IARR + LL + + +H + Sbjct: 195 VLACTHFPLLREELGRNLPQRIQLIDSGAAIARRVKHLLEAQQRLARLPDTPEHIAVFTQ 254 Query: 255 KPDIAMR 261 + R Sbjct: 255 ETQEVHR 261 >gi|314984207|gb|EFT28299.1| glutamate racemase [Propionibacterium acnes HL005PA1] Length = 284 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 10/265 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VE+ E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + + +S AR + L+ + D Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGAAPALISSSQQCARASYSLMAESGLLHSHPRD 237 Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267 F +G + RRLM+GF Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262 >gi|94311212|ref|YP_584422.1| glutamate racemase [Cupriavidus metallidurans CH34] gi|93355064|gb|ABF09153.1| glutamate racemase [Cupriavidus metallidurans CH34] Length = 270 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 6/254 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + + IFDSG+GGL VL+++R L+P +Y AD PYG + ++ R + + ++ Sbjct: 4 SPVGIFDSGLGGLSVLREVRALLPHESLLYFADSRYAPYGEKPERFVEARTLQVCEWLVA 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNTA LR ++ +G P +K AAA ++S ++ +L+T TL+ Sbjct: 64 QGCKAL-VIACNTATMHAVQTLRERL-AVPIIGVEPGLKPAAAASRSKVVGVLATANTLK 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + L+ S ++ + + L +E+ + D +++ + D Sbjct: 122 SAKFNRLLTSLGNESRFLCEAGVGLVPLIEQG----DVSSDTVRQTLGTLLSPMLEAGAD 177 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + L + +D +IAR+ L + + +LS Sbjct: 178 TLVLGCTHYPFLSETIDDLVDGRLALIDTGVAIARQLARKLAEFDLAASPDTAPSVRYLS 237 Query: 254 GKPDIAMRRLMQGF 267 K +R + Sbjct: 238 TKDAAHLREMAAAL 251 >gi|89889534|ref|ZP_01201045.1| glutamate racemase [Flavobacteria bacterium BBFL7] gi|89517807|gb|EAS20463.1| glutamate racemase [Flavobacteria bacterium BBFL7] Length = 262 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 6/240 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I FDSG+GG V +++ L+P + IY+AD PYG + + + +L Sbjct: 5 QPIGFFDSGVGGTSVWKEVVQLLPHENTIYLADSKHAPYGRKSKEEITQLCIKNTEYLLS 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L + CNTA T LR + + F+G PAIK AA + +G + IL+T TL Sbjct: 65 RG-CKLIAVPCNTATTNSISYLRGHY-DIPFIGIEPAIKPAALNSATGKVGILATKGTLT 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + ++ + + + +E K +E++ + D Sbjct: 123 SELFNRTQRAFTKDVNTIEIVGTGIVELIESG----KKDSEEMRNLLVSITEPFMISGID 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL C+HYP I + ++L P V +D+ ++AR+ +L N ++ H S Sbjct: 179 YLVLGCSHYPYIKDMLQELLPSRVKIIDSGAAVARQTYHILKEFNLLNDQISSGHHELFS 238 >gi|170769670|ref|ZP_02904123.1| glutamate racemase [Escherichia albertii TW07627] gi|170121478|gb|EDS90409.1| glutamate racemase [Escherichia albertii TW07627] Length = 262 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 140/256 (54%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V +++R L+P+ H+IY D+V FPYG + + +R++ + + + + Y Sbjct: 2 LVFDSGVGGLSVYEEIRRLLPDLHYIYAFDNVAFPYGEKSEEFVVERVVEIVTAVQEHYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S + E G I D +K+ + KE D +V Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDISLDALKRILRPWLRMKEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPEAKSADANIAFCMAMTP 238 Query: 257 D-IAMRRLMQGFGLKS 271 + + ++Q +G K+ Sbjct: 239 EAEQLLPVLQRYGFKT 254 >gi|317057059|ref|YP_004105526.1| glutamate racemase [Ruminococcus albus 7] gi|315449328|gb|ADU22892.1| glutamate racemase [Ruminococcus albus 7] Length = 273 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 6/259 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL ++++ L+P +Y+ D PYG + + + L Sbjct: 3 NSPIGVFDSGVGGLTCVKELTKLLPHEDIVYLGDTARVPYGTRSKETIARYTAQDM-EFL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAV-PAIKQAAAYTQSGLISILSTPA 130 + + ++AC TA ++I + + + G V PA A A T++G I +++T A Sbjct: 62 RGHDVKMILVACGTASSVIMSSPEFSGNTEPSYSGVVKPAANAACAATKNGRIGVIATGA 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R +I S + + + VE G + E + + Sbjct: 122 TIRSGSYGKVIRSIDPDAKVIGKACPMFVPLVENGYVGK--DCIPTRYFAEEYLECMKRE 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR-RARCLLPRINTHQTRVFDDHA 249 + D ++L CTHYPL+ + + V + +AR + L + Sbjct: 180 QVDTLILGCTHYPLLADLISDIMGDGVKLISAGAELARFAVKTLTFSDSLADREEQGTQK 239 Query: 250 LFLSGKPDIAMRRLMQGFG 268 LF + P++ + + G Sbjct: 240 LFCTDTPELFSENVERFLG 258 >gi|53716293|ref|YP_106352.1| glutamate racemase [Burkholderia mallei ATCC 23344] gi|121598002|ref|YP_990396.1| glutamate racemase [Burkholderia mallei SAVP1] gi|124381855|ref|YP_001024891.1| glutamate racemase [Burkholderia mallei NCTC 10229] gi|126446746|ref|YP_001079232.1| glutamate racemase [Burkholderia mallei NCTC 10247] gi|167002077|ref|ZP_02267867.1| glutamate racemase [Burkholderia mallei PRL-20] gi|254176068|ref|ZP_04882726.1| glutamate racemase [Burkholderia mallei ATCC 10399] gi|254356026|ref|ZP_04972303.1| glutamate racemase [Burkholderia mallei 2002721280] gi|52422263|gb|AAU45833.1| glutamate racemase [Burkholderia mallei ATCC 23344] gi|121225800|gb|ABM49331.1| glutamate racemase [Burkholderia mallei SAVP1] gi|126239600|gb|ABO02712.1| glutamate racemase [Burkholderia mallei NCTC 10247] gi|148025009|gb|EDK83178.1| glutamate racemase [Burkholderia mallei 2002721280] gi|160697110|gb|EDP87080.1| glutamate racemase [Burkholderia mallei ATCC 10399] gi|243062233|gb|EES44419.1| glutamate racemase [Burkholderia mallei PRL-20] gi|261826533|gb|ABM98669.2| glutamate racemase [Burkholderia mallei NCTC 10229] Length = 290 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 112/276 (40%), Gaps = 11/276 (3%) Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M P + + I +FDSG+GGL VL+ +R + + +YVAD PYG +D Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLLDEALVYVADSRHAPYGPRDDV 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + ++ + L V+ACNTA +R P + +G P IK AA ++ Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + +L+T ATLR L+ + + C L +E G ++ Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D +VL CTHYP + R ++ + +D D+IAR+ +L Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 R + GL + Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270 >gi|229821218|ref|YP_002882744.1| glutamate racemase [Beutenbergia cavernae DSM 12333] gi|259509810|sp|C5BY82|MURI_BEUC1 RecName: Full=Glutamate racemase gi|229567131|gb|ACQ80982.1| glutamate racemase [Beutenbergia cavernae DSM 12333] Length = 292 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 103/269 (38%), Gaps = 19/269 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P +YV D PYG +++ + + ++ Sbjct: 3 DAPIGIFDSGVGGLTVARAVLDQLPHESVLYVGDTARTPYGPRPIAQVREYSLEILDSLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L VIACN+A + + R + + + + PA+++AAA T++G I ++ T Sbjct: 63 ASGVKAL-VIACNSASAAMLADARERYEGDGVPVVEVIRPAVRRAAAATRNGRIGVIGTR 121 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ + + Q +H + VE+ + Sbjct: 122 ATISSRAYEDAFAA-APQLQLHTRACPDFVELVEDGETSGP----AVLASAHAYLDPLRD 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT------- 242 D +VL CTHYPL+ + V + +++ A L + ++ Sbjct: 177 AGVDTLVLGCTHYPLLAGAISYVMGEGVTLVSSAEETALDVYRTLVAHDLLRSADGARGD 236 Query: 243 ---RVFDDHALFLSGKPDIAMRRLMQGFG 268 R H +G P R + G Sbjct: 237 DGARSAPRHRFLATGDPAAFTRLARRFLG 265 >gi|154491820|ref|ZP_02031446.1| hypothetical protein PARMER_01441 [Parabacteroides merdae ATCC 43184] gi|154088061|gb|EDN87106.1| hypothetical protein PARMER_01441 [Parabacteroides merdae ATCC 43184] Length = 278 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 11/248 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG GGL + K+R MP Y +IY+ D+ PYG + + + + Sbjct: 7 GPIGIFDSGYGGLTIFDKIRAAMPGYDYIYLGDNARSPYGTRSFEVVYRFTKQAVETLFN 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + L ++ACNTA ++ P+ LG + P ++ ++S + IL Sbjct: 67 EG-CQLVILACNTASAKALRTIQQRDLPQWDPARRVLGVIRPTVELMDKISKSKHVGILG 125 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ S I + + + VE + ++K +E Sbjct: 126 TTGTITSDSYSLEIKKMFPHMTVTGEACPMWVPLVENNEFDSPGADYFVRKHLEHILAA- 184 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245 D +VL CTHYPL++ + P + + +A L R R+ Sbjct: 185 -DPEIDTLVLGCTHYPLLIEKIKAFLPEGITLFSQGEYVAASLTDYLRRHPEMDIRLTKQ 243 Query: 246 DDHALFLS 253 + + Sbjct: 244 GNCRFLTT 251 >gi|303256754|ref|ZP_07342768.1| glutamate racemase [Burkholderiales bacterium 1_1_47] gi|330999103|ref|ZP_08322824.1| glutamate racemase [Parasutterella excrementihominis YIT 11859] gi|302860245|gb|EFL83322.1| glutamate racemase [Burkholderiales bacterium 1_1_47] gi|329575492|gb|EGG57031.1| glutamate racemase [Parasutterella excrementihominis YIT 11859] Length = 265 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 7/242 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V+ +R +P IY D + PYG+ +K+R + + ++ K Sbjct: 1 MFDSGLGGLSVMHAVRDALPGEDIIYYGDCLYAPYGDRNSEYIKERCLAIGRFLISKGA- 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V++CNTA + +R TF + +G PAIK AAA T++G++ +++T T+ Sbjct: 60 KAIVVSCNTATAEGVNTMRDTF-DIPIIGIEPAIKPAAAATKTGVVGVIATTRTITSERY 118 Query: 138 SNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 L+ + + + V L VE +K IE + D +V Sbjct: 119 LRLVREFAGTKVKVVSVPCPGLMECVESGDWDSFKT----QKLIEKYLHPIKRAGADKLV 174 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHYP + +V ++ + +D S ++AR + L + ++SG Sbjct: 175 LGCTHYPFLSNVLKRELGSGTELIDPSAAVARELKHQLSKRGLLSDGAKGKEVFYISGDA 234 Query: 257 DI 258 + Sbjct: 235 EK 236 >gi|241895985|ref|ZP_04783281.1| glutamate racemase [Weissella paramesenteroides ATCC 33313] gi|241870716|gb|EER74467.1| glutamate racemase [Weissella paramesenteroides ATCC 33313] Length = 277 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 107/270 (39%), Gaps = 19/270 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN +I DSGIGGL V+++ +P+ Y+ D PYG +KK Sbjct: 1 MDNR--------AIGYLDSGIGGLSVVKQALKQLPDEQVYYIGDTARMPYGPRTSDEVKK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 L +++K L V+ACNTA D+L P + +G + P + A+ T+S Sbjct: 53 FTWQLVDFLMEK-DIKLLVVACNTATAATLDDLIKYLP-IPVVGVIQPGVDAASQVTESN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I I++T T+ + + + H+ +++ L E+ E + + + Sbjct: 111 NIGIIATQGTVNSMAYYDGLKKINADFHVLQLATPTLVKIAEQPEKN----ELTVNQVVT 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RI 237 + + D +VL CTH+PL+ ++ V +D S +L R Sbjct: 167 KVLLPIKASGIDTLVLGCTHFPLLAKFIQESVGEQVKLVDPGTSTIAAVAQILDDFKIRH 226 Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + + F +G I Sbjct: 227 ESTNGQKRNLDKYFTTGDQKIFDLLAENWL 256 >gi|218296251|ref|ZP_03497007.1| glutamate racemase [Thermus aquaticus Y51MC23] gi|218243323|gb|EED09853.1| glutamate racemase [Thermus aquaticus Y51MC23] Length = 257 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 110/262 (41%), Gaps = 17/262 (6%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + + I +FDSG+GGL VL ++ +P+ F+Y D PYG+ +++ + Sbjct: 1 MRNPKAPIGVFDSGVGGLTVLTALKKALPQEDFLYFGDTARVPYGSKPLSVVRRFAWEIA 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +L + V+ACNTA + +L S+ G + Q A + + ++ T Sbjct: 61 GFLL-REGVKAIVVACNTASSAALPDLAEDL-SVPVFGVLEPAAQVAQGYR--KVGLIGT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + + + VEE + +D + I ++E+ Sbjct: 117 QATVGSRAYERYVDLS------WAKACPLFVPLVEEG-----LWDDPVALLIARHYLEEA 165 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 + + ++L CTHYP + Q+ P V +D++++ A R L Sbjct: 166 PEDLEALILGCTHYPYLKRTIAQVLP-GVKLIDSAEATAGRVAEALAAEGLLNPEGRGQV 224 Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270 +++G P+ + R L + G++ Sbjct: 225 VHYVTGDPE-SYRALAERLGVR 245 >gi|238561735|ref|ZP_00441552.2| glutamate racemase [Burkholderia mallei GB8 horse 4] gi|254203335|ref|ZP_04909696.1| glutamate racemase [Burkholderia mallei FMH] gi|254205214|ref|ZP_04911567.1| glutamate racemase [Burkholderia mallei JHU] gi|147745574|gb|EDK52653.1| glutamate racemase [Burkholderia mallei FMH] gi|147754800|gb|EDK61864.1| glutamate racemase [Burkholderia mallei JHU] gi|238523998|gb|EEP87433.1| glutamate racemase [Burkholderia mallei GB8 horse 4] Length = 302 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 112/276 (40%), Gaps = 11/276 (3%) Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M P + + I +FDSG+GGL VL+ +R + + +YVAD PYG +D Sbjct: 13 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLLDEALVYVADSRHAPYGPRDDV 72 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + ++ + L V+ACNTA +R P + +G P IK AA ++ Sbjct: 73 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 130 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + +L+T ATLR L+ + + C L +E G ++ Sbjct: 131 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 186 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D +VL CTHYP + R ++ + +D D+IAR+ +L Sbjct: 187 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 246 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 R + GL + Sbjct: 247 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 282 >gi|320354870|ref|YP_004196209.1| glutamate racemase [Desulfobulbus propionicus DSM 2032] gi|320123372|gb|ADW18918.1| glutamate racemase [Desulfobulbus propionicus DSM 2032] Length = 262 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 8/256 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG+ V + + P + +Y+ D PYG+ + + +L + Sbjct: 2 IGIFDSGVGGMTVARAIEQFCPGFPLVYLGDLARTPYGSKSPAMITEYSHRNTDFLL-RQ 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACN+A + LRS + + PA+ +AA + +G I ++ T AT+ Sbjct: 61 GAKLIVIACNSAASTASSFLRSHYHQLIIDVIFPAVDRAAGESVNGRIGVIGTRATINSG 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + C ++ + +L VEE ++ E K ++ K+ D + Sbjct: 121 LYEQRLQAARPDCKVYSQACPLLVPLVEEGW----LERRETKMIVKKYLHPLRDKQIDTL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-INTHQTRVFDDH--ALFL 252 +L CTHYPL+ V +D+S +A + LL + Q+ D F+ Sbjct: 177 ILGCTHYPLLKKTIAPRIGRRVHIIDSSVEVALHLKTLLDSDHDLRQSLYAPDTPSRFFV 236 Query: 253 SGKPDIAMRRLMQGFG 268 S P + FG Sbjct: 237 SDIPSPVHALASKIFG 252 >gi|325911946|ref|ZP_08174349.1| glutamate racemase [Lactobacillus iners UPII 143-D] gi|325476248|gb|EGC79411.1| glutamate racemase [Lactobacillus iners UPII 143-D] Length = 261 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 17/265 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ + Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L K + + CNTA ++ P M +G + A+ TQ+ Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++++T AT+ I +Q + + LA VE K + Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEANPSDKIK-----KAVVV 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 C + + D ++L CTHYPL++ + +D +D +A+ +L R N Sbjct: 166 QCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLA 225 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQG 266 + H + +G P M+ + Sbjct: 226 AK-GGKHEYYTTGDPIKFMKIAQKW 249 >gi|110637498|ref|YP_677705.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406] gi|110280179|gb|ABG58365.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406] Length = 266 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 6/254 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I IFDSG+GGL +L K+ +P F Y D PYG +++ + + + Sbjct: 1 MHQPIGIFDSGVGGLTLLDKLVHALPAESFEYYGDSGNCPYGTKTIEEIRQHTIRIMDYL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + K+ + ++ACNT T I D+LRS +P M +G P K A A + + I IL+T T Sbjct: 61 MQKH-CKMIIVACNTITTNIIDQLRSIYP-MPIVGMEPGTKPAYASSANKRIGILATAGT 118 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + S+ + L +E+ I++ + +++E Sbjct: 119 INGQLYNRTLESFNDKAFFISQIGAGLVELIEQNI----IEQARMMQQLEPLLKPMIDAH 174 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHY + +V + P+P++ +D D++ R+ + +L T + Sbjct: 175 IDTLVLGCTHYNYLTNVLAGMFPYPIEIIDTRDAVTRQVQRILQEKALKATGTERSVTIT 234 Query: 252 LSGKPDIAMRRLMQ 265 +G ++ + L + Sbjct: 235 TTGDMEMLKQILKR 248 >gi|253681134|ref|ZP_04861937.1| glutamate racemase [Clostridium botulinum D str. 1873] gi|253562983|gb|EES92429.1| glutamate racemase [Clostridium botulinum D str. 1873] Length = 257 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 5/253 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I FDSG+GGL VL++ ++P FIY D PYG + +KK L F +L Sbjct: 7 PIGFFDSGVGGLSVLKEAIKILPNEDFIYYGDSKNAPYGTKKVDEVKK-LTFDAVKVLLG 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y V+ACNTA + ++LR+T+ M +G PA+K A + G I I++T TL Sbjct: 66 YNVKAIVVACNTATSAAIEDLRNTYKDMPIIGIEPALKPAVELSGDGKIVIMATNMTLAE 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + L+ Y +C I + L +E+ ++ ++K+ + + + Sbjct: 126 KKFNKLMSKYKDKCDIVSLPCPGLVEYIEKGI----VEGKKLKEFLVEKLSILDKDKIAS 181 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHYP I + V +D S A + + L + N+ L+ Sbjct: 182 VVLGCTHYPFIKKELYSILGDEVVIIDGSFGTANQLKRKLIKSNSINKENKKGKITILNS 241 Query: 255 KPDIAMRRLMQGF 267 D + ++ + Sbjct: 242 LKDDEIIKISKKL 254 >gi|157736547|ref|YP_001489230.1| glutamate racemase [Arcobacter butzleri RM4018] gi|189082951|sp|A8ERI7|MURI_ARCB4 RecName: Full=Glutamate racemase gi|157698401|gb|ABV66561.1| glutamate racemase [Arcobacter butzleri RM4018] Length = 261 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 6/228 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL VL+ + ++ Y+AD PYG + + KR + + +L +Y Sbjct: 3 VGVFDSGLGGLTVLKSILKVLKNAEIFYIADTAYAPYGEKDSALILKRCEDITNYLLKEY 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + ++ACNTA + LR F S+ +G P IK A T+S I IL+TP+TL+ Sbjct: 63 KIDALIVACNTATSAAIKHLRDNFSSLIVIGTEPGIKPAILNTKSSNIGILATPSTLKSD 122 Query: 136 YTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L++ S + + LA ++E+ +I K +E I + D Sbjct: 123 KYQLLVNELSSIKKVNLFEQACPGLAMQIEKG----EINTLTTYKMLEEWLIPMKEANVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 IVL CTHYPLI +++ + + D+IA+R L Sbjct: 179 TIVLGCTHYPLISQTIKKIMGEDITLIQTGDAIAKRLLSLSEEKGHKN 226 >gi|257454377|ref|ZP_05619640.1| glutamate racemase [Enhydrobacter aerosaccus SK60] gi|257448280|gb|EEV23260.1| glutamate racemase [Enhydrobacter aerosaccus SK60] Length = 289 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 19/270 (7%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I +FDSG+GGL VL ++ +P +IY+AD + PYG+ + +++ + + Sbjct: 5 ASAPIGVFDSGLGGLSVLTHLQRRLPFERYIYLADTLHVPYGSRSEAQIRELTLQAVA-W 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L L VIACN+A R +P + +G VPA+K A + + +++L+TPAT Sbjct: 64 LHSQGCKLIVIACNSASAHGLQAARRQYPQVPIVGLVPALKPAVMQSATKQVAVLATPAT 123 Query: 132 LRRTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 L + +I Q +H S L VE G+ + ++ E + Sbjct: 124 LHGYLLNEVIEQVAKPQQVTVHKYSFNSLVPWVE---LGMPSHHPAVTD-LDHLLSELQD 179 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPW--------PVDWLDNSDSIARRARCLLPRINTHQ 241 K+ D +VL CTH+P Q V +D+ D+IA+R LL + N Sbjct: 180 KKVDQLVLGCTHFPFFKAYLAQRIDELMTHQAMGQVALIDSGDAIAKRVHDLLEQANQLA 239 Query: 242 T-RVFDDHALFLSGK---PDIAMRRLMQGF 267 + + + + + A RL+Q F Sbjct: 240 SHKERPRLQFYATANLPTTEQAATRLLQRF 269 >gi|256820188|ref|YP_003141467.1| glutamate racemase [Capnocytophaga ochracea DSM 7271] gi|256581771|gb|ACU92906.1| glutamate racemase [Capnocytophaga ochracea DSM 7271] Length = 269 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 9/252 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG + +++ LMP + +++AD+ PYG + +L+ Sbjct: 9 APIGLFDSGVGGTTIWKEVNALMPNENTLFIADNKNAPYGEKTKEEIIALCDANTRFLLE 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL Sbjct: 69 -NNAKIIVVACNTGTTNAISYLRNKYKEVPFIGIEPAIKPASLQSVTKKIGVLATRSTLA 127 Query: 134 RTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Q I L +E +IK E+ + + + Sbjct: 128 SDLFAKTSEHLKQEEQVEIIEQVGEGLVDLIEAG----RIKSPEMTLLLRKYLLPMIAEG 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHA 249 D +VL CTHYP ++ ++L P + +D+ ++A++ R +L + + H Sbjct: 184 IDYLVLGCTHYPYLLPQIQELIPPHIKVIDSGYAVAKQTRNILSQHHLLNDDATAEPQHL 243 Query: 250 LFLSGKPDIAMR 261 +GK ++ + Sbjct: 244 WLANGKVEVLQQ 255 >gi|328949910|ref|YP_004367245.1| Glutamate racemase [Marinithermus hydrothermalis DSM 14884] gi|328450234|gb|AEB11135.1| Glutamate racemase [Marinithermus hydrothermalis DSM 14884] Length = 264 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 12/254 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG+GGL VL+ +R +P F+Y D PYG+ +++ + +L K Sbjct: 9 PIGVFDSGVGGLTVLRALRAALPGEDFLYFGDTARVPYGSKPPALVRQFAWEISGFLLRK 68 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA ++ +L ++ + PA+ AAA G + ++ T T++ Sbjct: 69 G-VKAIVVACNTASSVALPDLAASLSVPVYGVLEPAV--AAALRVEGRVGLIGTETTVQS 125 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + + VEE + ED + + + +++ K Sbjct: 126 GAYQARLARAGRA--VWARPCPLFVPLVEEG-----LWEDGVARLVVAHYLKDAPKDLSA 178 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYP + V ++ P V +D+++ AR L F++G Sbjct: 179 LILGCTHYPYLKPVIAEVLP-GVQLIDSAEVTARVVAEGLEARGLRNPEGAGRVVHFVTG 237 Query: 255 KPDIAMRRLMQGFG 268 P R L G Sbjct: 238 DPGT-YRVLANRLG 250 >gi|152993509|ref|YP_001359230.1| glutamate racemase [Sulfurovum sp. NBC37-1] gi|189030376|sp|A6QBL4|MURI_SULNB RecName: Full=Glutamate racemase gi|151425370|dbj|BAF72873.1| glutamate racemase [Sulfurovum sp. NBC37-1] Length = 265 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 6/233 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL V+Q + ++ YVAD PYG + + + + + LD++ Sbjct: 3 VGVFDSGLGGLTVVQALSRVIKGADIFYVADTKHAPYGEKTPEQILQYSLNITAYFLDEH 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q + +IACNTA + LR +P + +G P IK A T++ I +L+TPATL Sbjct: 63 QIDVLIIACNTATSAAVKTLRERYPELIIIGTEPGIKPALEQTRTKNIGVLATPATLVGE 122 Query: 136 YTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +L++ ++ + + + L ++E +I+ + +EG D Sbjct: 123 KYQDLVNVLSAKEEVTLYEQACPGLVEQIENG----EIESGKTHDMLEGWLHPMRENDVD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 IVL CTHYPL+ H ++ ++ + D+IA+R L F Sbjct: 179 TIVLGCTHYPLVAHKIEEIMKREMNLIHTGDAIAKRLLALAEEKGYENRGKFS 231 >gi|86140719|ref|ZP_01059278.1| glutamate racemase [Leeuwenhoekiella blandensis MED217] gi|85832661|gb|EAQ51110.1| glutamate racemase [Leeuwenhoekiella blandensis MED217] Length = 263 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 7/247 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GG + +++ +P IY+AD PYG + + ++ Sbjct: 4 KRPIGVFDSGVGGTSIWKEIVAKLPYEDSIYLADIKNAPYGERSKEEIIALSVKNTEYLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D+ + V+ACNTA T D LR+ + + F+G PAIK AA +++ I IL+T TL Sbjct: 64 DQG-CKIIVVACNTATTNAIDVLRANY-DIPFIGIEPAIKPAALASKTKAIGILATKGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + Y S+ ++ V L +E K+ +++ ++ + Sbjct: 122 SSALFARTSSLYTSELNVVEVIGKGLVELIEAG----KLHTEKLFNLLKSYIEPMLAQNI 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251 D +VL C+HYP ++ V +++ P + +D+ ++A++ +L Q F H L+ Sbjct: 178 DYLVLGCSHYPYLIPVLKKILPEHIQIIDSGQAVAKQTERVLGANQLLSQVDQFGKHKLY 237 Query: 252 LSGKPDI 258 + +I Sbjct: 238 SNASIEI 244 >gi|260910465|ref|ZP_05917134.1| glutamate racemase [Prevotella sp. oral taxon 472 str. F0295] gi|260635411|gb|EEX53432.1| glutamate racemase [Prevotella sp. oral taxon 472 str. F0295] Length = 279 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 14/267 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++ +P + I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + + Sbjct: 1 MNKFPQQA---GPIGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYGPRSFDVVYQ 57 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRST-FPSM----AFLGAV-PAIKQAAA 116 + ++ L +I CNTA ++ PS+ LG + P + + Sbjct: 58 FTRQAVIKLFEQG-CHLIIIGCNTASAKALRSIQQRDLPSLDAKRRVLGIIRPTAETIGS 116 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T + + IL+T T++ I + ++ + A+ VE + + Sbjct: 117 LTATRHVGILATEGTIKSDSYRLEIQKLFPDIQVQGMACPLWAAIVEANEADSPGADYFV 176 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 KK I+ + + + D IVL CTHYPL+++ + P V + + +A + L R Sbjct: 177 KKRIDA--LMRTDPQIDAIVLGCTHYPLLMNSIVKHVPSGVRIVPQGEYVANSLQQYLQR 234 Query: 237 INTHQT--RVFDDHALFLSGKPDIAMR 261 + D Sbjct: 235 HPEIDALCTKQGTVRYLTTENKDKFKE 261 >gi|239787442|emb|CAX83914.1| Glutamate racemase [uncultured bacterium] Length = 277 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 13/262 (4%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 +K I IFDSG+GGL VL+ + P FIY+ D PYG +++ + + Sbjct: 2 AKKYDSRPIGIFDSGVGGLTVLKALVSRFPHERFIYLGDTARVPYGTKSARTVERYSIQV 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK----QAAAYTQSGLI 123 +L + L V+ACNTA L + L+S P+ P + AA + G + Sbjct: 62 ADCLLARGVKGL-VVACNTASALGMEALKSHSPTPILGVIEPGCRAAGALAAGLGRPGKV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++ T +T+ + + ++ + VEE +++ ++ +E Sbjct: 121 GVIGTRSTVASGAYPAQLSRLDPGIEVFSLACPLFVPLVEEGW----LEQPAVRLIVEES 176 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 +R D ++L CTHYPL+ V ++ V +D++ ++A L R+ Sbjct: 177 LSPFLDQRLDALILGCTHYPLLAPVIAEVMGSAVPLVDSATAVADELERYLVRVIAPAPA 236 Query: 244 VFDDH----ALFLSGKPDIAMR 261 V + ++ D Sbjct: 237 VPEATGARLHFLVTDVADRFKE 258 >gi|328462612|gb|EGF34566.1| glutamate racemase [Lactobacillus helveticus MTCC 5463] Length = 266 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 102/267 (38%), Gaps = 16/267 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GG V++ + +P +++ D PYG+ + + Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVK-VIEKLPHESTVFIGDSANMPYGDKSREQIIE 51 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L K L + ACNTA + L++ AA T++ Sbjct: 52 LTRRSVKFLLQKK-VKLIIFACNTATAVAMPTLQNEVEQQIIGVIQSGSLAAARTTKNKK 110 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +++ +TP T+ I + V++ LA +E D ++ Sbjct: 111 VAVAATPVTINSHAYQKEIKFRDPDIKVMEVAAPELAPLIESQK-----DYDTNLAAVKR 165 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + + D VL CTHYPLI + F + + +D +D +A+ ++ R + Sbjct: 166 SIAPLKDQDFDTFVLGCTHYPLIQNEFVEALGDKIQIVDPADQVAQYTFNVMRRDGLFSS 225 Query: 243 -RVFDDHALFLSGKPDIAMRRLMQGFG 268 H + +G PD + G Sbjct: 226 FDQAGKHEYYTTGDPDKFSEMGRRFLG 252 >gi|296105345|ref|YP_003615491.1| glutamate racemase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059804|gb|ADF64542.1| glutamate racemase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 260 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 79/256 (30%), Positives = 137/256 (53%), Gaps = 4/256 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEDFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR+ F +G VPAIK AA T +G++ +L+T T++R Y Sbjct: 62 LALAVIACNTASTVSLPALRAKF-QFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + ++C I ++ S L E G + +E+++ + E D +V Sbjct: 121 TRELIDRFANECQIAMLGSAELVEMAEAKLHGKTVPLEELRRILRPWLRMPEP--PDTVV 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTH+PL+ ++ P +D+ +IARR LL + A ++ Sbjct: 179 LGCTHFPLLQEELLEVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMALTN 238 Query: 257 DI-AMRRLMQGFGLKS 271 + + +++ +G ++ Sbjct: 239 ETEQLLPVLRRYGFET 254 >gi|145220321|ref|YP_001131030.1| glutamate racemase [Prosthecochloris vibrioformis DSM 265] gi|145206485|gb|ABP37528.1| glutamate racemase [Chlorobium phaeovibrioides DSM 265] Length = 271 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 6/211 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q+ I IFDSG+GGL VL+ M+ L+P +Y D PYG +++ + IL Sbjct: 8 QSPIGIFDSGVGGLTVLKAMQKLLPSEQLLYFGDTARVPYGTKSQVTIRRYA-EEDTRIL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPAT 131 ++QP + ++ACNT L D + T + LG + A A T++G I ++ T AT Sbjct: 67 LRHQPKMIIVACNTVSALALDVVEKTADPLPVLGVLEAGADTAVEVTRTGRIGVIGTQAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + I+ + + + + EE + ++ + E Sbjct: 127 ISSNAYAYAINQASADSEVFSTACPLFVPLAEEGMLNNEATRLIAREYLAPLLAE----E 182 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 D +VL CTHYP++ + + + V +D+ Sbjct: 183 IDTLVLGCTHYPILRTIIEETAGTGVTIIDS 213 >gi|325280786|ref|YP_004253328.1| Glutamate racemase [Odoribacter splanchnicus DSM 20712] gi|324312595|gb|ADY33148.1| Glutamate racemase [Odoribacter splanchnicus DSM 20712] Length = 278 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 109/263 (41%), Gaps = 13/263 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++ + SI +FDSG GGL +L+++ +PEY+++Y+ D+ PYG + + Sbjct: 1 MEQHKESIGVFDSGYGGLTILKEIVRKLPEYNYVYLGDNARAPYGARSFEVVYEYTREAV 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122 + + + L ++ACNTA +L P LG + P+++ Y+Q+G Sbjct: 61 HKLFE-MECRLVILACNTASAKALRTIQQVDLPQWDPEKRVLGVIRPSVEALNTYSQNGH 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + IL+T T+ + + I ++ + VE + ++K I Sbjct: 120 VGILATRGTVASGSYPIEVGKLYGEERFRITQLACPMWVPLVENNELDGEGAIYFVRKYI 179 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + D I+L CTHYPL+ + + P V + +A L R Sbjct: 180 QELLG--TDPEIDTIILGCTHYPLLRPLIARFVPSRVKIIGQGQIVAGSLADYLKRHPEI 237 Query: 241 QTRVFDDHA--LFLSGKPDIAMR 261 R+ D + K ++ R Sbjct: 238 DRRLGKDSRRSYLTTEKTELFDR 260 >gi|260771658|ref|ZP_05880578.1| glutamate racemase [Vibrio metschnikovii CIP 69.14] gi|260613435|gb|EEX38634.1| glutamate racemase [Vibrio metschnikovii CIP 69.14] Length = 269 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 83/249 (33%), Positives = 134/249 (53%), Gaps = 9/249 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 +++L + +LIFDSG+GGL V Q++ L+P+ + Y+ D+ +PYG L R+ L Sbjct: 1 MQQQLSHKVLIFDSGVGGLSVYQEIVSLLPQLDYTYLFDNAAYPYGELAQEVLLNRVERL 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++ + L VIACNTA T++ LR+ S+ +G VPAIK A+ I +++ Sbjct: 61 IISLVKQQSFDLVVIACNTASTIVLPMLRAKL-SIPVVGVVPAIKPASLVAH-KAIGLIA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TPAT+ R YT +LI ++ S+ + L+ S L EE G ++ ++E+ + Sbjct: 119 TPATITRQYTHDLIRNFSSKKSVELLGSTRLVDMAEEKLRGQEVDKEELATILSPLI--- 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 +R DV VL CTH+PLI +Q+ V +D+ +IARR + LL + + Sbjct: 176 --QRIDVAVLGCTHFPLIKAEIQQVLGDDVMLIDSGQAIARRVQQLLDVEPGLKHQ--HP 231 Query: 248 HALFLSGKP 256 H +F S P Sbjct: 232 HTIFASAPP 240 >gi|296129171|ref|YP_003636421.1| glutamate racemase [Cellulomonas flavigena DSM 20109] gi|296020986|gb|ADG74222.1| glutamate racemase [Cellulomonas flavigena DSM 20109] Length = 285 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 13/262 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P +Y+ D + PYG A++ + + D++ Sbjct: 18 DAPIGIFDSGVGGLTVARAVLDQLPHESTLYIGDTLNGPYGPKPLAAVRAHALEIMDDLV 77 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAV-PAIKQAAAYTQSGLISILST 128 D + VIACN+A + + R + + + V PA ++A A T++G I ++ T Sbjct: 78 DAG-VKMLVIACNSASAAVLRDARERYTVRRGLPVVEVVLPAARRAVAATRNGRIGVIGT 136 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + V+ + + VE + Sbjct: 137 RATVESRAYDDAFA--VAGVDLTSRACPRFVELVEAGVTSGP----DALATAHEYLDPVR 190 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FD 246 D +VL CTHYPL+ V + V + +++ A+ L + + Sbjct: 191 QAGVDTLVLGCTHYPLLTGVISYVMGDQVTLVSSAEETAKDVYRTLVAHDLERDPAAGPP 250 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 H +G P + G Sbjct: 251 THRFLATGDPGSFAALARRFLG 272 >gi|94986184|ref|YP_605548.1| glutamate racemase [Deinococcus geothermalis DSM 11300] gi|94556465|gb|ABF46379.1| Glutamate racemase [Deinococcus geothermalis DSM 11300] Length = 271 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 10/259 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + +FDSG+GGL VL ++R +P F+Y+AD P G D ++ + + Sbjct: 4 EAPLGVFDSGVGGLSVLAQLRRHLPHEDFLYLADTAHVPIGARPDDEIRDLTERAVAALH 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + V+ACNTA LR + PS +G VPA+K A A T+SG++ +L+TP T Sbjct: 64 ARGAKG-VVVACNTASAFSLTPLRERYGPSFPIIGLVPAVKPAVAATRSGVVGVLATPGT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 LR T ++I + + +++ S L VE + + + Sbjct: 123 LRGTLLRDVIRKWADPAGVRVLTAVSAELVPLVEAGQA----SSERARAVLRETLTPLAQ 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D +VL CTHYP + R+ +D+ ++AR +L + HA Sbjct: 179 AGADQLVLGCTHYPFLAESIRREFGDTFALVDSGAAVARHTGNVLAGAGLLREAGRPGHA 238 Query: 250 LF-LSGKPDIAMRRLMQGF 267 + ++G P+ A R +M Sbjct: 239 TYLVTGNPE-ASRPVMATL 256 >gi|229101609|ref|ZP_04232332.1| Glutamate racemase [Bacillus cereus Rock3-28] gi|228681851|gb|EEL36005.1| Glutamate racemase [Bacillus cereus Rock3-28] Length = 264 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 103/254 (40%), Gaps = 7/254 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++ Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVECLKQFPL 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++ Sbjct: 60 KALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQSNM 118 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 +H + +H + LA+ VE + ++++ + + D ++ Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTLI 174 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHYPL+ ++ V + +++ A +L + H F +G Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSV 234 Query: 257 DIAMRRLMQGFGLK 270 + G + Sbjct: 235 LSFEHIAERWLGYE 248 >gi|158520555|ref|YP_001528425.1| glutamate racemase [Desulfococcus oleovorans Hxd3] gi|158509381|gb|ABW66348.1| glutamate racemase [Desulfococcus oleovorans Hxd3] Length = 261 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 104/241 (43%), Gaps = 7/241 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V + + + Y +Y D PYG + K + +++L + Sbjct: 2 IGIFDSGLGGLTVARAVMDELAGYDILYFGDTARTPYGAKSPETVIKYALEN-TELLLSH 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + ++ACNTA ++ + + + F F PA+ AA +++G I ++ T AT+ Sbjct: 61 GAKMVIMACNTASSVATEAVTARFDIPVFEVITPAVALAARLSKTGAIGVIGTRATINSG 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 I +H + +L VEE +K+ E ++ + ++ D + Sbjct: 121 IYEKKILEQRPGARVHSQACPLLVPLVEEGW----LKKPETAMIVKKYLHPLKTRQVDTL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDHALFLS 253 +L CTHYP++ V +D+S ++AR + + + + +S Sbjct: 177 ILGCTHYPILKKTIGHKIGRRVAIIDSSTAVARSVKAFIDGHPPMEASLSKTGTARFLVS 236 Query: 254 G 254 Sbjct: 237 D 237 >gi|163846057|ref|YP_001634101.1| glutamate racemase [Chloroflexus aurantiacus J-10-fl] gi|222523790|ref|YP_002568260.1| glutamate racemase [Chloroflexus sp. Y-400-fl] gi|163667346|gb|ABY33712.1| glutamate racemase [Chloroflexus aurantiacus J-10-fl] gi|222447669|gb|ACM51935.1| glutamate racemase [Chloroflexus sp. Y-400-fl] Length = 262 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 10/253 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL V++ + +P+ +Y+AD PYG ++ R + ++D+ Sbjct: 2 IGIFDSGLGGLSVMRAIHERLPDTDLLYLADSAYCPYGPRPLSEIRDRALACGRWLVDQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA + LR P + +G P +K A A T++G +++L+T TL Sbjct: 62 A-RIVVVACNTATAAAIELLRRELP-VPVVGMEPGVKPAVAATRNGKVAVLATSGTLASD 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L+ +Y + ++ ++ L ++VE +++ D+ + IE DVI Sbjct: 120 RFRSLVQAYAAGVEVYPLACPDLVAQVEAG----ELQSDQTRNLIEQHLA--TVPEVDVI 173 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+P + + + V +D ++A + + +IN +G Sbjct: 174 VLGCTHFPPLKPLIATCAGSHVTVIDTGPAVAAQTERIARQINVPAG--SGTIRCATTGD 231 Query: 256 PDIAMRRLMQGFG 268 P + L +G Sbjct: 232 PQLVAPALYNVWG 244 >gi|262201908|ref|YP_003273116.1| glutamate racemase [Gordonia bronchialis DSM 43247] gi|262085255|gb|ACY21223.1| glutamate racemase [Gordonia bronchialis DSM 43247] Length = 254 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 9/249 (3%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL V + + L+P+ +Y+ D PYG +++ + + D+ + VI Sbjct: 1 MGGLTVARAIIDLLPDEDIVYIGDTANGPYGPLTIPEIRRHALAIGDDLAARG-VKAIVI 59 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + R + + + V PA+++A T++G I ++ T AT+ + Sbjct: 60 ACNTASAACLRDARERYAPIPVVEVVLPAVRRAVVATKTGRIGVIGTEATIASRAYQDSF 119 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + I V+ VE + +I +G + D +VL CTH Sbjct: 120 AA-ARDAVITAVACPRFVDFVERGITSGR----QILGLAQGYLEPLQEAGVDTVVLGCTH 174 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFLSGKPDIA 259 YPL+ V + V + +++ A+ +L + + D +G P+ Sbjct: 175 YPLLSGVIQLAMGDEVTLVSSAEETAKDLFRVLTEADLLHSHSDRVADRVFQATGDPEFF 234 Query: 260 MRRLMQGFG 268 R + G Sbjct: 235 ARLSSRFLG 243 >gi|309812185|ref|ZP_07705943.1| glutamate racemase [Dermacoccus sp. Ellin185] gi|308433872|gb|EFP57746.1| glutamate racemase [Dermacoccus sp. Ellin185] Length = 266 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG GGL V + + +P IY+ D PYG +++ + ++ Sbjct: 3 DAPIGIFDSGYGGLTVARAVLDQLPHEKIIYLGDTARAPYGPRPIAEVRQYAIECLDSLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L VIACN+A + + R + PA ++AAA T++ + ++ST AT Sbjct: 63 EQGVKAL-VIACNSASAAVLHDARERYDVPVVEVIRPATRRAAAATRNNRVGVISTEATH 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + ++ + Q I V VE E+ + Sbjct: 122 QSGAYTDSFAA-APQVKISSVPCPRFVEFVEAGITSGP----ELLTVAHKYLDGLVDEGV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250 D ++L CTHYPL+ V + V + +++ A+ +L I + H Sbjct: 177 DTLILGCTHYPLLTGVISYVVGSTVTLVSSAEETAKDVYRVLADIGQLRDPELGPTQHQW 236 Query: 251 FLSGKPDIAMRRLMQGFG 268 +G P + G Sbjct: 237 MTTGDPAAFETLARRFLG 254 >gi|238897697|ref|YP_002923376.1| glutamate racemase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465454|gb|ACQ67228.1| glutamate racemase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 271 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 87/257 (33%), Positives = 141/257 (54%), Gaps = 5/257 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 S+LI DSGIGGL V Q+M+ L+P H+IY D+ GFPYG + + ++++ + + I K Sbjct: 12 SVLILDSGIGGLSVYQEMKKLLPHIHYIYCFDNEGFPYGEKSEIFILEQIVRIMTAIQKK 71 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + +IACNTA T++ LR F S +GAVPAIK AA T++G++ +L+TPAT++R Sbjct: 72 HFLNCVIIACNTASTIVLPILRQRF-SFPIIGAVPAIKPAAHITRNGVLGLLATPATIKR 130 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 YT +LI + C + L+ S L E+ G +I + KK ++ K D Sbjct: 131 PYTLDLIKRFAKNCQVELLGSSELVYLAEKKVLGTEISINMFKKILQPWL--NLQKVPDT 188 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 IVL CTH+P I++ +Q+ + + +IA+RA L+ F + A + Sbjct: 189 IVLGCTHFPFIINELQQIF-LNARMIHSGAAIAKRAFSLIGSQQNTSVHSFKNKAYCVKK 247 Query: 255 KPDI-AMRRLMQGFGLK 270 D ++ +++ +G Sbjct: 248 NGDTESLSPILEKYGFS 264 >gi|332883073|gb|EGK03357.1| glutamate racemase [Dysgonomonas mossii DSM 22836] Length = 275 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 11/255 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L +++ LMPEY + Y+ D+ PYG + + + + D Sbjct: 5 GPIGVFDSGYGGLTILSEIQALMPEYDYCYLGDNSRAPYGARSFEVVYEFTKQAVTALFD 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA ++ P LG + P + T+S + +L Sbjct: 65 -MGCNLVILACNTASAKALRTIQQKDLPNMNPDKRVLGIIRPTAEIIGQITRSRHVGVLG 123 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ I+ + + + VE + + +KK ++ Sbjct: 124 TVGTIQSQSYPIEINKLFPDIKVTGEACPMWVPLVENNEYESEGADYFVKKNLDNILA-- 181 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVF 245 + D+++L CTHYPL++H +++ P V L + IA + L R Sbjct: 182 KDPDIDILILGCTHYPLLLHKIKKILPKEVTALPQGEYIAHSLKDYLRRHPEMDGACTKN 241 Query: 246 DDHALFLSGKPDIAM 260 + F + + Sbjct: 242 GETHYFTTESSEKFS 256 >gi|154247770|ref|YP_001418728.1| glutamate racemase [Xanthobacter autotrophicus Py2] gi|154161855|gb|ABS69071.1| glutamate racemase [Xanthobacter autotrophicus Py2] Length = 305 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 100/252 (39%), Positives = 146/252 (57%), Gaps = 1/252 (0%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL V +++ + P+ HFIY ADD FPYG D L R+ + + ++ Sbjct: 32 PTILVFDSGLGGLSVFREVARVRPDAHFIYAADDAAFPYGALADDTLVDRINRVVNRLIG 91 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + +P L VIACNTA TL LR+ P++ F+G VPAIK A +++ +S+L+TP T+R Sbjct: 92 EVRPDLVVIACNTASTLALPSLRAAHPTLPFIGTVPAIKPACIASRTKRVSVLATPGTVR 151 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT+ L+ + S C + LV S LA E G + + +I EI CF+ G+RTD Sbjct: 152 RDYTAALVREFASGCDVALVPSDRLAGLAEAAMAGDPVDDCDIVAEIAPCFVNSGGRRTD 211 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALFL 252 +VLACTHYPLI+ +L+PWPV ++D + +IARR L+ L Sbjct: 212 TVVLACTHYPLILDRLTRLAPWPVTFIDPAPAIARRVTQLIGTAAPGTANEDPPPVRLVS 271 Query: 253 SGKPDIAMRRLM 264 + +P A R Sbjct: 272 TLRPMEATRISA 283 >gi|86606820|ref|YP_475583.1| glutamate racemase [Synechococcus sp. JA-3-3Ab] gi|86555362|gb|ABD00320.1| glutamate racemase [Synechococcus sp. JA-3-3Ab] Length = 292 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 109/274 (39%), Gaps = 18/274 (6%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + I +FDSG+GGL V + +R +P+ +Y AD PYG+ + + + Sbjct: 7 SDPDPSWPIGVFDSGLGGLTVWRALRRRLPQERLVYFADTARLPYGDRSAEEILTFVRQI 66 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + V+ACNT+ L ++++ F ++ LG + QAA Q I +++ Sbjct: 67 LRWM-QAQPVKVVVMACNTSSALALEQVQQEF-ALPILGLILPGAQAALA-QGSRIGVIA 123 Query: 128 TPATLRRTYTSNLIHSYVS--------QCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 T AT++ S I Y + + +E ++ E+++ Sbjct: 124 TAATVKSRAYSKAIQEYSALDPRRFPQPVQCWEQACPEFVPLIEAG----QLDGPELRQA 179 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 E + D +V CTHYPL+ + + L P V +D ++ L Sbjct: 180 AERYLQPLLQQGIDTLVYGCTHYPLLDPLLKSLLPSSVRRVDPGVALVGSLARELSLWGL 239 Query: 240 HQTRV---FDDHALFLSGKPDIAMRRLMQGFGLK 270 + + H ++SG P+ + G + Sbjct: 240 RRPSTASQAEPHRFYVSGDPERFAQLATPWLGFR 273 >gi|332530565|ref|ZP_08406502.1| glutamate racemase [Hylemonella gracilis ATCC 19624] gi|332039971|gb|EGI76360.1| glutamate racemase [Hylemonella gracilis ATCC 19624] Length = 276 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 6/255 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ I +FDSGIGGL VLQ + +P ++YVAD PYG E + R M + ++ Sbjct: 14 ESPIGVFDSGIGGLSVLQALHAELPHQRYVYVADSGHAPYGEREPQHVIDRTMAVAEYLV 73 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ V+ACNTA + LR+ P + +G PAIK AA ++++ + +L+T TL Sbjct: 74 ARHGIQALVVACNTATAIAIHLLRAEHPHLPLVGLEPAIKPAAQHSRNHRVGVLATRGTL 133 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY-ACGIKIKEDEIKKEIEGCFIEKEGKR 191 + L S Q L LA +E I + + C Sbjct: 134 QSEKFRVLHASLAQQAEFVLQPCDGLAGAIERQDEERIATLSAQYASALGPCGTAP--GC 191 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHYPLI R L V +++ +AR+ R +LP I T + Sbjct: 192 IDTVVLGCTHYPLITSQLRALLGPDVVMIESGAPVARQTRRVLPHIGDAGT---PSTVYY 248 Query: 252 LSGKPDIAMRRLMQG 266 +G+ + Sbjct: 249 TTGQIGALQAAARRW 263 >gi|213961790|ref|ZP_03390056.1| glutamate racemase [Capnocytophaga sputigena Capno] gi|213955579|gb|EEB66895.1| glutamate racemase [Capnocytophaga sputigena Capno] Length = 271 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 9/252 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG + +++ LMP +++AD+ PYG + +L Sbjct: 9 APIGLFDSGVGGTTIWKEINALMPNESTLFLADNKNAPYGEKTKEEIITLCDANTQFLLA 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL Sbjct: 69 QKA-KIIVVACNTGTTNAISYLRNKYKDVPFIGIEPAIKPASLQSVTKKIGVLATRSTLA 127 Query: 134 RTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Q I L +E +I+ E+ + + + Sbjct: 128 SDLFAKTSEHLKQEEQVEIIEQVGEGLVDLIEAG----RIESPEMTQLLRHHLLPMVALG 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHA 249 D +VL CTHYP ++ +QL P + +D+ ++A++ R +L + + T + H Sbjct: 184 IDYLVLGCTHYPYLLPQIQQLIPARIKVIDSGYAVAKQTRNILLQHHLLNEDTSMTPSHI 243 Query: 250 LFLSGKPDIAMR 261 +G ++ + Sbjct: 244 WLANGNTEVLKQ 255 >gi|255994482|ref|ZP_05427617.1| glutamate racemase [Eubacterium saphenum ATCC 49989] gi|255993195|gb|EEU03284.1| glutamate racemase [Eubacterium saphenum ATCC 49989] Length = 267 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 16/265 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I FDSG+GGL + + +P IY D PYG+ +++ Sbjct: 1 MDNRP--------IGFFDSGLGGLTCIASVSRRLPHEDIIYFGDTARTPYGSKSVKTIQR 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQS 120 + +L K + VIACN+ LR + + +G + + K + Sbjct: 53 FSAEICDFLLQK-NVKMIVIACNSVSATSLGFLREKYKDIPIVGIIESAAEKAIDDAKEG 111 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I I+ T AT+ N+I V + + +EE I +K + Sbjct: 112 NKIGIIGTKATISSMAYKNIIEQSVEGADVAQKACPAFVPLIEEGIIENDIMNLSVKYYL 171 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + E R + +VL CTHYP I + ++ P + +D SD ++R+ +L + + Sbjct: 172 DHFIAE---NRINTLVLGCTHYPFIANNIKRNYP-NLKLIDPSDEVSRQIEKILKKKDIV 227 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQ 265 + + + S D +R + + Sbjct: 228 ACK-DGNKQFYASDVSDNFIRMVQE 251 >gi|148272474|ref|YP_001222035.1| glutamate racemase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830404|emb|CAN01339.1| murI [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 294 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 92/239 (38%), Gaps = 6/239 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + L+P Y+ D PYG+ +++ + + D++ Sbjct: 3 DAPIGIFDSGVGGLTVARAVATLLPRESITYIGDTAHTPYGDKPIADVRRYALAVLDDLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA + + R + PA++ A + T++ + +++T AT+ Sbjct: 63 ERG-VKMLVIACNTASAAMLRDARERYDIPVVEVIQPAVRTAVSVTRNHRVGVIATHATV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + + VE E+ EG Sbjct: 122 TSRAYDDAFAA-APHLELTSAEAPDFVAFVERGVTSGP----ELMAAAEGYLAPLRAAGI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHYP + L V + + A+ L + + Sbjct: 177 DTLVLGCTHYPFLEGAISLLMGPDVTLVSSDTETAKDVYRELVSAGLERRSDAPPVIRY 235 >gi|82702343|ref|YP_411909.1| glutamate racemase [Nitrosospira multiformis ATCC 25196] gi|82410408|gb|ABB74517.1| glutamate racemase [Nitrosospira multiformis ATCC 25196] Length = 268 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 12/255 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I +FDSGIGGL VLQ ++ P+ ++Y+ D PYG + +R IL Sbjct: 7 SPIAVFDSGIGGLTVLQALKKRYPQESYVYLGDTARLPYGTKSPE-IVQRYSQSLCRILL 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 Y P VIACNTA T + +R+ + +G + PA A T++ I +++T T+ Sbjct: 66 NYNPSAIVIACNTASTHALEAVRALAAPLPVIGMIEPAAAAAIQATKNQHIGVIATFGTI 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + + +L + EE I +++ ++ F + Sbjct: 126 RSGVYEKELKKINPHIKASSQACQMLVALAEEGWSSGPIATAIVRQYLDPIF--DTAEAP 183 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTH+P+ +FR + V +++ ++ A + + T + Sbjct: 184 DTLILGCTHFPVFEALFRDILGSSVTLINSGEAAATQLSGI--------TGTRGQIKMLA 235 Query: 253 SGKPDIAMRRLMQGF 267 + P+ + F Sbjct: 236 TDDPERFAANASKFF 250 >gi|149374689|ref|ZP_01892463.1| glutamate racemase [Marinobacter algicola DG893] gi|149361392|gb|EDM49842.1| glutamate racemase [Marinobacter algicola DG893] Length = 283 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 5/224 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +L+FDSG+GGL V + +P +Y+AD+ GFPYG + + +R L L ++ Sbjct: 6 VLVFDSGVGGLSVADCIHRQLPGVKLVYLADNAGFPYGAQPESVVIERSQALIRLALSEF 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA T++ LR+ S+ +G VPA+K AAA +++ I +L+TPAT+RR Sbjct: 66 PCDVIVVACNTASTVVLPYLRAM-TSIPVVGVVPAVKPAAAVSENRRIGLLATPATVRRP 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y ++LI + S C + + L +E G + E + ++ D + Sbjct: 125 YLADLIDEFASDCTVERLGHPDLVQWIENLVSGSPVPEQALSVALQ----PFRDVGVDTV 180 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 VL CTHYPLI + ++ P W+D+ ++IARRA L + Sbjct: 181 VLGCTHYPLIKDLLQRQLPAVKHWVDSGEAIARRAIWLFEQQGL 224 >gi|78184894|ref|YP_377329.1| glutamate racemase [Synechococcus sp. CC9902] gi|78169188|gb|ABB26285.1| glutamate racemase [Synechococcus sp. CC9902] Length = 262 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 11/254 (4%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 FDSGIGGL VL+++ IY+ D PYG+ ++ + + + D+ Q Sbjct: 6 GFFDSGIGGLTVLRQVLERHGPVQCIYLGDTARVPYGSRSAPEIRLIAAEVVAWLRDQ-Q 64 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNT L +D +G + A AAA Q+ + +L+TPAT+ Sbjct: 65 VSTVVMACNTTNALARDVAEGQAGG-PVIGLIGA---AAAMVQTSRVGVLATPATVASEA 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 + I + + + +E + DE+++ + + IV Sbjct: 121 YRSSIEALHPGTLVVEQACPEFVPLIESG----DLSSDELRRTAKEYLQPLLKASVESIV 176 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHALFLSG 254 L CTHYPL+ V RQL P V +D + +AR+ +L P+ + + DD ++ Sbjct: 177 LGCTHYPLLEPVLRQLLPDSVQLIDPAVGVARQLDSVLGAPKPSVGEGLHLDDCRFCVTA 236 Query: 255 KPDIAMRRLMQGFG 268 PD R G Sbjct: 237 DPDGFATRATPWLG 250 >gi|46447487|ref|YP_008852.1| glutamate racemase [Candidatus Protochlamydia amoebophila UWE25] gi|46401128|emb|CAF24577.1| probable glutamate racemase [Candidatus Protochlamydia amoebophila UWE25] Length = 249 Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 7/233 (3%) Query: 30 QKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFT 89 ++M L+P+ + +Y+ D PYGN + + + +L+K Q + V+ACNTA Sbjct: 2 REMIRLLPQENLLYLGDTARVPYGNKSAATIIRYSIENAIFLLEK-QIKVLVVACNTASA 60 Query: 90 LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148 L +L+ F + +G + P K AAA T++ I++L T T+ + IH + Sbjct: 61 LALPKLKQLF-HLPIIGVIEPGAKLAAATTRNKRIAVLGTKGTIESGAYQSAIHQLIPDA 119 Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208 I ++ +L S VEE + K I+ E D I+L CTHYPL+ + Sbjct: 120 IIFPIACPLLVSLVEEGF----LYHSASKLIIQEYLKNLEKADVDTILLGCTHYPLLKPL 175 Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMR 261 ++ V +D++ + A+ + LL + H F++ P+ + Sbjct: 176 IEEIMGSSVTIIDSALTCAQTVKKLLESHQLVNSNQHAIHQYFVTDDPEKFRQ 228 >gi|167855237|ref|ZP_02478006.1| glutamate racemase [Haemophilus parasuis 29755] gi|167853601|gb|EDS24846.1| glutamate racemase [Haemophilus parasuis 29755] Length = 256 Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 6/250 (2%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL + +R +P+ H++Y D+ FPY + L +R + + I + Y + V+ Sbjct: 1 MGGLTIYDAIRENLPDAHYLYCFDNAYFPYSEKSEAVLIERAVGIVQKIAENYPLDMVVV 60 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 ACNTA T++ LR F +M +G VPAIK AA +Q+ I +L+T T+ R Y LI Sbjct: 61 ACNTASTVVLPALRERF-AMPIVGTVPAIKPAAQISQTKTIGLLATKGTVTRPYVDELIE 119 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 Y C + + S L VEE + ++K + + D ++L CTH+ Sbjct: 120 RYAKDCVVERIGSTDLVEIVEEKQQTGSVDMQRLQKVVAEW---QSHPTLDTVILGCTHF 176 Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262 PL+ +QL P ++D+ + IA R LL + + ++ F + + ++R Sbjct: 177 PLVKEELQQLLPRVSFFVDSGNRIANRVVSLLQDVKRNVNNENKENQAFCTQNSEDFLKR 236 Query: 263 --LMQGFGLK 270 +MQ +G K Sbjct: 237 EKVMQNWGFK 246 >gi|157959995|ref|YP_001500029.1| glutamate racemase [Shewanella pealeana ATCC 700345] gi|189030371|sp|A8GYV7|MURI_SHEPA RecName: Full=Glutamate racemase gi|157844995|gb|ABV85494.1| glutamate racemase [Shewanella pealeana ATCC 700345] Length = 268 Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 131/261 (50%), Gaps = 10/261 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ILIFDSGIGGL + ++R ++P+ Y+ D+ PYG E+ L K + L + Sbjct: 1 MFGPILIFDSGIGGLSIFDEIRKVLPDQDCCYLFDNARLPYGELEESVLIKGCVELICEQ 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 K L V+ACN+A TL+ LR S+ +G VPAIK AA + + I +L+TP T Sbjct: 61 ALKIDASLVVVACNSASTLVLPGLRERL-SIPIVGVVPAIKPAAKLSIARHIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R+YT LI + C + L S L E G + +++ ++E + Sbjct: 120 IKRSYTRELIEQFADGCKVELFGSSELVMLAEAKLAGESVDLIKLRAQLE----PIRQSK 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDH 248 D +VL CTH+P+I +Q+ V LD+ +IA+R LL + + R + Sbjct: 176 LDTLVLGCTHFPIIASEMQQILGNGVKLLDSGVAIAQRVVFLLNEFSLDKVVDNRTKNLT 235 Query: 249 ALFLSGKPDIAM--RRLMQGF 267 A++ + + + R +GF Sbjct: 236 AIYTTAEISAGLTTRLAEKGF 256 >gi|288819213|ref|YP_003433561.1| glutamate racemase [Hydrogenobacter thermophilus TK-6] gi|288788613|dbj|BAI70360.1| glutamate racemase [Hydrogenobacter thermophilus TK-6] gi|308752795|gb|ADO46278.1| glutamate racemase [Hydrogenobacter thermophilus TK-6] Length = 255 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 103/230 (44%), Gaps = 10/230 (4%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL++++ P +Y+ D PYG + + + ++ ++ Sbjct: 4 GVFDSGVGGLTVLKEIKKAFPSLDLVYLGDTARVPYGGKSKDTIIRYSLECAEFLI-RFD 62 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA + D L+ + G + P +++A +++ +I ++ T +T++ Sbjct: 63 IDLLVVACNTASSYALDILKKEL-GIPVFGVIKPGVRKALEVSKNKVIGVIGTKSTIKSG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + ++ + + VEE D + K ++ + + + D + Sbjct: 122 VYQRSLME--AGSVVYAKACPLFVPLVEEGLT----HGDIVDKVVDFYLRDFKNTQMDTL 175 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 +L CTHYPL+ + V +D++ ++ + T R+F Sbjct: 176 ILGCTHYPLLAEAIKNYMG-DVQIVDSASALVEDISSFVKNEGTSSLRLF 224 >gi|328955986|ref|YP_004373319.1| glutamate racemase [Coriobacterium glomerans PW2] gi|328456310|gb|AEB07504.1| glutamate racemase [Coriobacterium glomerans PW2] Length = 309 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 102/262 (38%), Gaps = 16/262 (6%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GG V + + MP +Y+ D PYG ++ + + + ++ Sbjct: 13 DRPIGVFDSGVGGFTVARAISRAMPHESIVYIGDTARCPYGTRGVEEVRAFVAQVGTWLV 72 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + + + VIACNTA + F + +G + P + A T++ I +L+T T Sbjct: 73 -RQRVKVIVIACNTATASALGLAQRMF-DVPVIGVIGPGARAAVLATRTREIGVLATDLT 130 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK------------IKEDEIKKE 179 + I + + +H ++ VE G E++ Sbjct: 131 IASGAYLRAIKNLDAGVGVHGCATQRFVELVESRLAGGIGADAQWLDGADLFDTPEVRAL 190 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RIN 238 + G D +VL CTH+PL+V R + V + +++ R +L + + Sbjct: 191 VRRETEPLRGLDIDAVVLGCTHFPLLVRPIRAVLGRGVHVVSSAEETMRELHEMLACQGH 250 Query: 239 THQTRVFDDHALFLSGKPDIAM 260 + +H + + A Sbjct: 251 LAPSTARPEHRFATTSENTSAF 272 >gi|116070411|ref|ZP_01467680.1| Glutamate racemase [Synechococcus sp. BL107] gi|116065816|gb|EAU71573.1| Glutamate racemase [Synechococcus sp. BL107] Length = 262 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 11/254 (4%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 FDSGIGGL VL+++ IY+ D PYG+ ++ + + + D+ Q Sbjct: 6 GFFDSGIGGLTVLRQVLERHGPVQCIYLGDTARVPYGSRSAPEIRLIAAEVVAWLRDQ-Q 64 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNT L +D +G + A AAA Q+ + +L+TPAT+ Sbjct: 65 VSTVVMACNTTNALARDVAEGQAGG-PVIGLIGA---AAAMVQTSRVGVLATPATVASEA 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 I + + + +E + DE+++ + + IV Sbjct: 121 YRFSIEALHPGTLVVEQACPEFVPLIESG----DLSSDELRRTAKEYLHPLLEASVESIV 176 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHALFLSG 254 L CTHYPL+ V RQL P V +D + +AR+ +L P+++ + DD ++ Sbjct: 177 LGCTHYPLLEPVLRQLLPDSVQLIDPAVGVARQLDSVLGAPKLSVGEGLHLDDCRFCVTA 236 Query: 255 KPDIAMRRLMQGFG 268 PD R G Sbjct: 237 DPDGFATRATPWLG 250 >gi|315225613|ref|ZP_07867422.1| glutamate racemase [Capnocytophaga ochracea F0287] gi|314944430|gb|EFS96470.1| glutamate racemase [Capnocytophaga ochracea F0287] Length = 269 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 9/252 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG + +++ LMP + +++AD+ PYG + +L+ Sbjct: 9 APIGLFDSGVGGTTIWKEVNALMPNENTLFIADNKNAPYGEKTKEEIIALCDANTRFLLE 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL Sbjct: 69 -NNAKIIVVACNTGTTNAISYLRNKYKEVPFIGIEPAIKPASLQSVTKKIGVLATRSTLA 127 Query: 134 RTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Q I L +E +IK E+ + + + Sbjct: 128 SDLFAKTSEHLKQEEQVEIIEQVGEGLVDLIEAG----RIKSPEMTLLLRKYLLPMVAEG 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HA 249 D +VL CTHYP ++ ++L P + +D+ ++A++ R +L + + + H Sbjct: 184 IDYLVLGCTHYPYLLPQIQELIPPHIKVIDSGYAVAKQTRNILSQHHLLNDDATAEAQHL 243 Query: 250 LFLSGKPDIAMR 261 +GK ++ + Sbjct: 244 WLANGKVEVLQQ 255 >gi|222111527|ref|YP_002553791.1| glutamate racemase [Acidovorax ebreus TPSY] gi|221730971|gb|ACM33791.1| glutamate racemase [Acidovorax ebreus TPSY] Length = 291 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 19/276 (6%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72 I +FDSGIGGL VLQ +R +P HF+Y+AD PYG+ D +++R + + + Sbjct: 8 RPIGVFDSGIGGLSVLQALRHELPHEHFVYLADSGNAPYGDAKGDAFVQQRTLAIARWLR 67 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNTA ++LR+ P + +G PA+K AAA +Q+ + +L+T T+ Sbjct: 68 EHHGIKALVVACNTATAAAVEQLRAALPDLPAIGVEPALKPAAASSQTHHVGVLATRGTV 127 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-- 190 L + + + LA +E+ + + +IE ++ G Sbjct: 128 GSARFQRLRDGHSAGTRFSVQPCDGLARAIEQ-STEEPLPAAASMAKIEALCVQYTGALG 186 Query: 191 -------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 D +VL CTHY + R L V +D +AR+ R +L + + Sbjct: 187 TFGLKTGEIDTLVLGCTHYVFAKDMLRALVGPDVQIIDTGAPVARQTRRILDQTHALAPE 246 Query: 244 -------VFDDH-ALFLSGKPDIAMRRLMQGFGLKS 271 H L+ +G+ + L + Sbjct: 247 HAVDGAPAAPGHIQLYTTGQLAALQSAAERWLQLPA 282 >gi|315080007|gb|EFT51983.1| glutamate racemase [Propionibacterium acnes HL078PA1] Length = 248 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 6/247 (2%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ + Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQ 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ + +IACNTA + + + R + +PA ++A+A T++G I ++ Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T AT R + + + V + + VE+ E++ Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D ++L CTHYPL+ + + V + +S AR + L+ + + Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 237 Query: 247 DHALFLS 253 FL+ Sbjct: 238 SSRYFLT 244 >gi|22298004|ref|NP_681251.1| glutamate racemase [Thermosynechococcus elongatus BP-1] gi|22294182|dbj|BAC08013.1| glutamate racemase [Thermosynechococcus elongatus BP-1] Length = 297 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 9/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I +FDSG+GGL VLQ ++ +P+ F+Y D PYG + + + + + Sbjct: 15 GAIGVFDSGVGGLTVLQALQSRLPQESFLYFGDTARLPYGTRRRSEILQYVREILRWM-H 73 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 ++V+ACNT+ L ++RS F LG VP K A T I +++TPAT+ Sbjct: 74 AQGVKMAVMACNTSSALALTQVRSEF-CFPILGLIVPTAKIAV--TLGKRIGVIATPATV 130 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + I V+ VE ++ D + + + Sbjct: 131 KSGAYARALQEFSPTVAIAQVACPEFVPLVESNC----LEGDRVHRIVRQTLSPLVEFDP 186 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV++ CTHYP + HV Q P V LD + ++AR A L +N ++ Sbjct: 187 DVLIYGCTHYPHLRHVIEQYVPTTVHHLDPAHAVARAAVRKLEAMNLATPCPQGQVQFYV 246 Query: 253 SGKPDIAMRRLMQGFGL 269 SG P+ + Q G Sbjct: 247 SGIPEQFAQLASQWLGY 263 >gi|116629100|ref|YP_814272.1| glutamate racemase [Lactobacillus gasseri ATCC 33323] gi|116094682|gb|ABJ59834.1| glutamate racemase [Lactobacillus gasseri ATCC 33323] Length = 283 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 98/265 (36%), Gaps = 15/265 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ + Sbjct: 18 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSKEEIIS 69 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + +L K + + CNTA + ++ P AA T++ Sbjct: 70 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMSTIKKEIPLQIIGVVQSGALAAARTTETKN 128 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++++ T AT+ I + + + LA EE E+ + + Sbjct: 129 VAVIGTKATVNSHSYLKEIQYRDPKIQVSEFAQPKLAPLAEE-----DPAEEIKQAVVSE 183 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYPL+ + +D +D +A+ +L R Sbjct: 184 SLAPLKKADYDTLVLGCTHYPLLRKEIVAVVGQDRKIVDPADQVAQYTYNVLRRDGLFAA 243 Query: 243 RVFD-DHALFLSGKPDIAMRRLMQG 266 D H + +G+ Q Sbjct: 244 GNSDTKHEYYTTGEAKKFTEITRQW 268 >gi|116493005|ref|YP_804740.1| glutamate racemase [Pediococcus pentosaceus ATCC 25745] gi|730082|sp|Q08783|MURI_PEDPE RecName: Full=Glutamate racemase gi|122265531|sp|Q03ES4|MURI_PEDPA RecName: Full=Glutamate racemase gi|349029|gb|AAA16761.1| glutamate racemase [Pediococcus pentosaceus] gi|435999|gb|AAC36914.1| glutamate racemase [Pediococcus pentosaceus] gi|116103155|gb|ABJ68298.1| glutamate racemase [Pediococcus pentosaceus ATCC 25745] Length = 265 Score = 264 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 16/263 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++ + L+P I++ D+ PYG + + Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKTAQKLLPNEEIIFIGDEARMPYGPRPTAEVVE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + S ++ K VIACNTA L++ P + +G + P A T++ Sbjct: 53 FSRQMASFLMTK-NIKALVIACNTATNAALAVLQAELP-IPVIGVILPGAIAANRQTKNQ 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T T++ + ++ + V+ E+ ++ +K + Sbjct: 111 KIGVIATLGTIKSEAYPKALAEINTKLRAYPVACQEFVEIAEKN----ELHTTAAQKVMN 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-H 240 E + D ++L CTH+PL+ + V +D + +L + H Sbjct: 167 EKLAEFRQDQIDTLILGCTHFPLLEEGIQAAVGPDVTLVDPGVETVHQLIEILTKQALQH 226 Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263 + +G Sbjct: 227 AEGPKAQDQYYSTGNIKNFEEIA 249 >gi|300857321|ref|YP_003782305.1| glutamate racemase [Clostridium ljungdahlii DSM 13528] gi|300437436|gb|ADK17203.1| glutamate racemase [Clostridium ljungdahlii DSM 13528] Length = 261 Score = 264 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 7/251 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSGIGG+ VL++ ++ F+Y D PYG + KRL F ++L Sbjct: 5 DRPIGFFDSGIGGISVLKEAVKILSNEDFVYFGDSKMAPYGVKTAEEV-KRLTFNAVELL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 V+ACNTA + +LR + SM +G PA+K A + + G I I++T T Sbjct: 64 LTKNIKALVVACNTATSAAIIDLRKKYSKSMPIIGIEPALKPAVEFNRKGKIVIMATTMT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L SNL+ Y S+ I + L +E+ K + +E++ ++ + + Sbjct: 124 LSERKFSNLMKKYESRSSIQPLPCPGLVELIEQG----KTEGEEVEGYLKEKLNSLKDEG 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250 +VL CTHYP + R++ + +D S + + L + + + + Sbjct: 180 IAAVVLGCTHYPFVKKSIRKILNEDIPIIDGSKGTVEQLKRQLVKYHIKNNKNKAGKVTI 239 Query: 251 FLSGKPDIAMR 261 F S + ++ Sbjct: 240 FNSMDSEFIIQ 250 >gi|121595188|ref|YP_987084.1| glutamate racemase [Acidovorax sp. JS42] gi|120607268|gb|ABM43008.1| glutamate racemase [Acidovorax sp. JS42] Length = 291 Score = 264 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 19/276 (6%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72 I +FDSGIGGL VLQ +R +P HF+Y+AD PYG+ D +++R + + + Sbjct: 8 RPIGVFDSGIGGLSVLQALRHELPHEHFVYLADSGNAPYGDAKGDAFVQQRTLAIARWLR 67 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNTA ++LR+ P + +G PA+K AAA +Q+ + +L+T T+ Sbjct: 68 EHHGIKALVVACNTATAAAVEQLRAALPDLPAIGVEPALKPAAASSQTHHVGVLATRGTV 127 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-- 190 L + + + LA +E+ + + +IE ++ G Sbjct: 128 GSARFQRLRDGHSAGTRFSVQPCDGLARAIEQ-STEEPLPAAASMAKIEALCVQYTGALG 186 Query: 191 -------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 D +VL CTHY + R L V +D +AR+ R +L + Sbjct: 187 TFGLKTGEIDTLVLGCTHYVFAKDMLRALVGPDVQIIDTGAPVARQTRRILDQAGALAPE 246 Query: 244 --------VFDDHALFLSGKPDIAMRRLMQGFGLKS 271 L+ +G+ + L + Sbjct: 247 HAADGAPAAPGHIQLYTTGQLAALQSAAERWLQLPA 282 >gi|291456377|ref|ZP_06595767.1| glutamate racemase [Bifidobacterium breve DSM 20213] gi|291381654|gb|EFE89172.1| glutamate racemase [Bifidobacterium breve DSM 20213] Length = 264 Score = 264 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 101/263 (38%), Gaps = 13/263 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GG+ V +++ MP H +Y D PYG +K + + Sbjct: 4 SAPIGVFDSGLGGISVAREIAKDMPAEHVLYFGDSANAPYGVKTPEQVKALSFDIVERFV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--------YTQSGLIS 124 + + VIACNTA + ++LR + + +G PA+K A + Sbjct: 64 E-HGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDAPLGQQHIPQRVI 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TP TLR + L+ + S I L VE G D + + + F Sbjct: 122 VAATPLTLRERKFAELMKRFDSDNTIFKEPCPDLVEIVESGQLG---NHDLVMRTLHHYF 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + R D +VL CTH+ FR+L P +D ++ R +L + Sbjct: 179 DRYDLDRIDSVVLGCTHFVFYRDYFRELLPKHAAIIDGNEGTVRHLGVVLESLGKLAPED 238 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 + P + +L Sbjct: 239 ALGRVEISNSDPSERIAKLSHNL 261 >gi|298207461|ref|YP_003715640.1| Glutamate racemase [Croceibacter atlanticus HTCC2559] gi|83850097|gb|EAP87965.1| Glutamate racemase [Croceibacter atlanticus HTCC2559] Length = 263 Score = 264 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 6/251 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GG + +++ L+P IY+AD PYG + + + ++ Sbjct: 4 NAPIGIFDSGVGGTSIWREIHQLLPLEQTIYLADSKYAPYGEKTKDEIVELSIKNTEKLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ V ACNTA T LR+ + ++ + PAIK AA T++ + IL+T TL Sbjct: 64 SLGAKVIIV-ACNTATTNAIKHLRANY-TLPIIAIEPAIKPAALNTKTKAVGILATQGTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + Y I V L +E K E+++ ++ K Sbjct: 122 NSELFTQTSELYARDIDIIEVFGKGLVPEIEAGRQDGK----EVERLLKLYLKPMLDKNI 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL C+HYP ++ ++L P V +D+ ++AR+ + +L N + Sbjct: 178 DYLVLGCSHYPYLIPKLKELLPKTVTIIDSGLAVARQTKAVLEHYNLSAISPQPAPIFYT 237 Query: 253 SGKPDIAMRRL 263 + +R++ Sbjct: 238 NSDNLEPLRQI 248 >gi|149927946|ref|ZP_01916196.1| glutamate racemase [Limnobacter sp. MED105] gi|149823385|gb|EDM82618.1| glutamate racemase [Limnobacter sp. MED105] Length = 278 Score = 264 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 10/267 (3%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + ++ +FDSG+GGL VL+ M +P F +VAD+ PYG+ H + R++ Sbjct: 4 PVLLESARAVGVFDSGVGGLSVLKAMLNYLPAERFRFVADERYLPYGDKPQHEITDRVLT 63 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 L S+ L + V+ACNTA ++ R+ + +G PA+K A+ T++G++ IL Sbjct: 64 L-SNWLRNQECKAMVMACNTATAAGANQARAAHANWPIVGIEPAVKPASMLTKTGVVGIL 122 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ L+ + + L +E+ + E I+ ++ E Sbjct: 123 ATTNTVASERFKGLVERFDPLAKVIAHPCPGLVELIEQ----SPMPEPAIEALLKPVLAE 178 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF- 245 K DVIVL CTHYP + H+ +L+ V ++ +A++ + L Sbjct: 179 LLQKNADVIVLGCTHYPFVAHLISKLAGPDVTVIETGLPVAKQLKTRLESEGLLNMGEAH 238 Query: 246 ----DDHALFLSGKPDIAMRRLMQGFG 268 + + F +G+P+ +L+ G Sbjct: 239 LPMIERVSFFTTGQPEAFKTKLVNLLG 265 >gi|303231315|ref|ZP_07318051.1| glutamate racemase [Veillonella atypica ACS-049-V-Sch6] gi|302514045|gb|EFL56051.1| glutamate racemase [Veillonella atypica ACS-049-V-Sch6] Length = 269 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 7/254 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG+GGL VL+ ++ P +FIY+ D+ P GN + + + + L + Sbjct: 10 PIGVFDSGVGGLSVLKVLQEQFPNENFIYIGDNANNPVGNRPTEEITEIACRIA-ETLHQ 68 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L VIACNT + DE+RS ++ +G +K A + S I I++T AT+ Sbjct: 69 VPVKLMVIACNTFTVVALDEVRSRV-NVPVIGVSQGVKTAIRESNSNTIGIMATVATVNS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + + LA +E+ + +D ++K + + DV Sbjct: 128 HIHKYVAMDIDHEVFVWEQPCPELAGLIEQG----HLHDDAVRKAAKEYLAPMLERDIDV 183 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLS 253 +VL CTH+P + V ++LS + ++D + + R + + H H L+ + Sbjct: 184 VVLGCTHFPFVSPVLQELSGDRIRYIDPAYETSDLVRRTMDSNHLHNPSTEKGHSTLYFT 243 Query: 254 GKPDIAMRRLMQGF 267 + Q Sbjct: 244 KDIALGADLGAQFL 257 >gi|300362243|ref|ZP_07058419.1| glutamate racemase [Lactobacillus gasseri JV-V03] gi|300353234|gb|EFJ69106.1| glutamate racemase [Lactobacillus gasseri JV-V03] Length = 283 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 97/265 (36%), Gaps = 15/265 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ + Sbjct: 18 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSKEEIIS 69 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + +L K + + CNTA + ++ P AA T++ Sbjct: 70 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMSTIQKEVPLQIIGVVQSGALAAARTTETKN 128 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++++ T AT+ + + + + LA EE E+ + + Sbjct: 129 VAVIGTKATVNSHSYLKEVQYRDPEIQVSEFAQPKLAPLAEE-----DPAEEIKQAVVSE 183 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTHYPL+ + +D +D +A+ +L R Sbjct: 184 SLAPLRNINYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDGLFAA 243 Query: 243 RVFD-DHALFLSGKPDIAMRRLMQG 266 D H + +G+ Q Sbjct: 244 DDSDTTHEYYTTGEAKKFTEITRQW 268 >gi|251778481|ref|ZP_04821401.1| glutamate racemase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082796|gb|EES48686.1| glutamate racemase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 258 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 5/233 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I FDSG+GGL V+++ LMP ++IY D PYG ++ Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAICLMPNENYIYFGDSKNAPYGIKTVEEVRTLTFNAVES 62 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L++ V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP Sbjct: 63 LLEQ-NVKAIVVACNTATSAAIDLVRSKYKNIPIIGIEPALKLATKYNRKGNIIIMATPM 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL+ +L+ Y I + L +E + E+ +K++ + + Sbjct: 122 TLKEKKFKSLMEKYGENYDIVSLPCAKLVEFIEHGILNGEELEEYLKEKFKSY----KNN 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 V+VL CTHYP I ++ + +D ++ R L N T Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTE 230 >gi|170694655|ref|ZP_02885807.1| glutamate racemase [Burkholderia graminis C4D1M] gi|170140537|gb|EDT08713.1| glutamate racemase [Burkholderia graminis C4D1M] Length = 295 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 9/246 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L Sbjct: 20 RAPVGIFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFIADRTLAI-GEWL 78 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + ++ACNTA +R S+ +G P IK AA +++ + +L+T TL Sbjct: 79 ARQGAKALIVACNTATAQSIALVREKL-SIPLVGVEPGIKPAALQSKTRVAGVLATQVTL 137 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ Y + C L VE + E++ + Sbjct: 138 RSARFQALLERYAADCRFICQPGHGLVQAVER----CDVGSTELRALLASYLEPMLAAGA 193 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDHA 249 D +VL CTHYP + R + + +D S +IAR+ +L + T +T Sbjct: 194 DTLVLGCTHYPFLDAAIRDIVGDRMALIDTSVAIARQLERVLEQHGVRATPETAGAPPPR 253 Query: 250 LFLSGK 255 + + Sbjct: 254 FYSTDN 259 >gi|313159357|gb|EFR58721.1| glutamate racemase [Alistipes sp. HGB5] Length = 257 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 6/242 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I ++DSG+GGL V +++R ++P +Y+ D PYG+ +++ + ++ Sbjct: 3 DAPIGVYDSGLGGLTVWREVRRMLPSESLVYLGDGKNCPYGSRPREEVRRLADEAVASLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNTA D LR + M +G PA+K A T+SG++ +L+T +L Sbjct: 63 AQG-CKMVVVACNTATAAAIDFLREKYAPMPIVGMEPAVKPACLNTRSGVVGVLATERSL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y S + VE E ++ + Sbjct: 122 DGELFRRTAAKYGSGVELITAPGRGFVELVESDRESTPEAEQAVRDAVAVML----EHGA 177 Query: 193 DVIVLACTHYPLIVHVFRQLS-PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D IVL CTHYP ++ V ++ V+ +D S ++ARR LL + H F Sbjct: 178 DQIVLGCTHYPFLLPVLERVVAGRGVEIVDPSPAVARRVVQLLDQYGLHAAPDHVPSYTF 237 Query: 252 LS 253 + Sbjct: 238 RT 239 >gi|158423846|ref|YP_001525138.1| glutamate racemase [Azorhizobium caulinodans ORS 571] gi|158330735|dbj|BAF88220.1| glutamate racemase [Azorhizobium caulinodans ORS 571] Length = 288 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 95/221 (42%), Positives = 138/221 (62%), Gaps = 1/221 (0%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+FDSG+GGL V +++ P+ FIY ADD FPYG D AL R+ + ++ Sbjct: 21 PTILVFDSGLGGLSVFREVARARPDASFIYAADDAAFPYGALSDAALVARVSSVMDTLIA 80 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +P L V+ACNTA TL LR+ + F+G VPA+K A A + + +S+L+TP T+R Sbjct: 81 ATRPTLVVVACNTASTLALPTLRAAH-GLPFVGTVPAVKPACAASVTRKVSVLATPGTVR 139 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT++L+ + C + LV S LA E G I +++++ EI CF+ E RTD Sbjct: 140 RDYTASLVRDFAGSCEVTLVPSPRLAELAEAVMRGAAIDDEDLRAEIAPCFVRSETGRTD 199 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +VLACTHYPLIV R+++PWPV+++D + +IARR LL Sbjct: 200 TVVLACTHYPLIVDQLRRVAPWPVNFVDPAPAIARRVASLL 240 >gi|258544909|ref|ZP_05705143.1| glutamate racemase [Cardiobacterium hominis ATCC 15826] gi|258519829|gb|EEV88688.1| glutamate racemase [Cardiobacterium hominis ATCC 15826] Length = 272 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 7/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL V++ + +P H IY D PYG ++ + +L Sbjct: 9 NRPIGVFDSGVGGLTVVRALMERLPLEHLIYYGDTARVPYGVKSRATIETYSAQIVEYLL 68 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPAT 131 + L VIACNT + D +R+ + L + A QAA T Q+ I++++T T Sbjct: 69 AQRVKAL-VIACNTIAAVAGDSIRAQARGLPVLDVITAGAQAALQTSQNHHIAVIATNTT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + IH++ Q + + +L VEE + +++ ++ + Sbjct: 128 VNSNAYARAIHAHDPQARVQSQACPLLVPLVEEGWLEHDVTRLTVREYLKPILAD----D 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHYPL+ + R+ +P + +D++ + A L + H + Sbjct: 184 ADTLVLGCTHYPLLKPLLREEAP-RLALVDSATTTAAHTAQALTAAGLLRQSGDSAHYRY 242 Query: 252 LSGKPDIAMRRLMQGF 267 + R + + F Sbjct: 243 CVSDIPLRFRAIGERF 258 >gi|46204044|ref|ZP_00050583.2| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1] Length = 277 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 107/264 (40%), Positives = 156/264 (59%), Gaps = 7/264 (2%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + + IL+FDSG+GGL VL+++R P+ H++Y ADD FPYG + L R++ + Sbjct: 4 QASEPVILVFDSGLGGLTVLEQVRRARPDAHYLYAADDAAFPYGRLSEPQLVARVIAVME 63 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L +Y P L VIACNTA T++ LR F F+G VP IK AAA T+S L+S+L+TP Sbjct: 64 RLLTRYAPDLVVIACNTASTVVLPALRQRF-VTPFVGVVPPIKPAAALTRSRLVSLLATP 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188 T+ R YT +L+ ++ + C + LV S LA E G + + I EI CF+ + Sbjct: 123 GTVARAYTHDLVENFAADCAVTLVGSQNLARYAEAEMAGAPVADAAILAEIAPCFVTGAD 182 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 G+RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + Sbjct: 183 GRRTDVVCLSCTHYPLLLGRFERLAPWPVIWIDPAPAIARRVVQLLGAALAARPEPPAAR 242 Query: 249 ALFLSG---KPDIAMRRLMQGFGL 269 A+F G P A+ R ++ GL Sbjct: 243 AIFTGGGGLNP--ALGRSLERRGL 264 >gi|42518578|ref|NP_964508.1| glutamate racemase [Lactobacillus johnsonii NCC 533] gi|81668196|sp|Q74KU5|MURI_LACJO RecName: Full=Glutamate racemase gi|41582863|gb|AAS08474.1| glutamate racemase [Lactobacillus johnsonii NCC 533] Length = 266 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 97/265 (36%), Gaps = 15/265 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ + Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + +L K + + CNTA + ++ P AA T++ Sbjct: 53 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMATIQKEIPLQIIGVVQSGALAAARTTETKN 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++++ T AT+ I + + + LA EE ED + Sbjct: 112 VAVIGTKATVASHSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----DPDEDTKNAVVSE 166 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYPL+ + +D +D +A+ +L R + Sbjct: 167 SLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFAE 226 Query: 243 RVFD-DHALFLSGKPDIAMRRLMQG 266 H + +G+ Q Sbjct: 227 STAPVKHDYYTTGEAKKFTEITRQW 251 >gi|6980778|pdb|1B73|A Chain A, Glutamate Racemase From Aquifex Pyrophilus gi|6980779|pdb|1B74|A Chain A, Glutamate Racemase From Aquifex Pyrophilus Length = 254 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 15/239 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ +R + +Y+ D PYG + + + + DK Sbjct: 3 IGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA + L+ F P +K+A +++ I ++ TPAT++ Sbjct: 63 -VDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + + + A EE +I +K +E E +GK D + Sbjct: 122 AYQRKLEE--GGADVFAKACPLFAPLAEEGLLEGEIT----RKVVEHYLKEFKGK-IDTL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +L CTHYPL+ ++ + +D+S++++ L N + LF + Sbjct: 175 ILGCTHYPLLKKEIKKFLG-DAEVVDSSEALS------LSLHNFIKDDGSSSLELFFTD 226 >gi|257451947|ref|ZP_05617246.1| glutamate racemase [Fusobacterium sp. 3_1_5R] gi|317058497|ref|ZP_07922982.1| glutamate racemase [Fusobacterium sp. 3_1_5R] gi|313684173|gb|EFS21008.1| glutamate racemase [Fusobacterium sp. 3_1_5R] Length = 261 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 6/240 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL + ++P+ +FIY AD PYG + K ++ K Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADVDHVPYGTKTKEEIIKYTSEAVDFLV-KE 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA + ELR + S+ +G PA+K+A + + +++TP T++ Sbjct: 62 GVKAIVIACNTATSAAIQELRERY-SLPIIGMEPAVKKAIDFHPEKRVLVIATPMTVQGE 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NLI ++ + ++ L + EE +++ + ++ F + + I Sbjct: 121 KLHNLIEKVDTEHLVDAIALPKLVTFAEEEM----FEDEVVSAYLQEEFKQLNLEDYSSI 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ ++L P V +LD ++ ++ L IN + + SG+ Sbjct: 177 VLGCTHFNYFKESLKKLLPKGVKFLDGNEGTIKKLISELENINALEKNEKRKIEYYYSGR 236 >gi|291533966|emb|CBL07079.1| glutamate racemase [Megamonas hypermegale ART12/1] Length = 270 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 6/235 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+++R L+P +FI+V D PYG+ + L Sbjct: 4 NSPIGVFDSGLGGLTVLKELRRLLPHENFIFVGDSARAPYGSRTPEEIISFLQQFMDYFQ 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + ++V ACNT + ++ S A + PAI A + + I +++T AT+ Sbjct: 64 SRG-VKMAVCACNTMTSYGYPVIKDK-TSFALVPMNPAIIPAVKASANKHIGVIATEATI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ + Q + V +E I +D I + ++ + + Sbjct: 122 KKGMHKQAASNLDPQIKVFGVGCPKFVPLIETG----HIHDDAIDEAVQEYADKFKTSDI 177 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 ++L CTHYP+I V + V ++ + A+ A +L + N T+ Sbjct: 178 HSLILGCTHYPIISEVLTKHFGKDVALINPALETAKDAATILTKNNLLNTQEQSG 232 >gi|307730275|ref|YP_003907499.1| glutamate racemase [Burkholderia sp. CCGE1003] gi|307584810|gb|ADN58208.1| glutamate racemase [Burkholderia sp. CCGE1003] Length = 290 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 9/250 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + Sbjct: 14 AHPASRAPVGIFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFIADRTLAI 73 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L + VIACNTA +R S+ +G P IK AA ++S + +L+ Sbjct: 74 -GEWLARQGAKALVIACNTATAQSIALVRERL-SIPLVGVEPGIKPAALQSRSRVAGVLA 131 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T TLR T L+ Y + C L VE + +++ + G Sbjct: 132 TQVTLRSTRFQALLERYAADCRFICQPGHGLVQAVER----CDVGSAQLRALLAGYLQPM 187 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D +VL CTHYP + R + + +D S +IAR+ +L + Sbjct: 188 LEAGADTLVLGCTHYPFLDAAIRDIVGERMALIDTSVAIARQLERVLEQHGLRAAPHATG 247 Query: 248 H---ALFLSG 254 F + Sbjct: 248 APLPRFFSTD 257 >gi|241763139|ref|ZP_04761199.1| glutamate racemase [Acidovorax delafieldii 2AN] gi|241367764|gb|EER62018.1| glutamate racemase [Acidovorax delafieldii 2AN] Length = 284 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 68/246 (27%), Positives = 104/246 (42%), Gaps = 8/246 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + +SI +FDSG+GGL VL+ + +P F+Y+AD PYG D + +R + Sbjct: 1 MPQASSSIGVFDSGVGGLSVLRALIAALPHERFVYLADSGNAPYGERGDAFVARRTHAIT 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + +Y V+ACNTA E+RS P + +G PA+K A T +G I +L T Sbjct: 61 DYLQSQYDIKALVVACNTATAAAIHEVRSAHPELPLVGVEPALKPAVGLTHTGRIGVLGT 120 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIEGCFI 185 TL L S Q + LA +E + G E E Sbjct: 121 RGTLTSAKFGRLQASLAGQAEFVVQPCDGLAHAIERSVGWPSGPNAPGTETFALCEKYLA 180 Query: 186 EKEGKR-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + D +VL CTHY + R L V ++ + +AR+ R LL + + Sbjct: 181 SMKPFGSAPGSIDTLVLGCTHYVFVEEALRSLVGPQVQMIETGEPVARQTRRLLEQESLL 240 Query: 241 QTRVFD 246 + + Sbjct: 241 ASDDPN 246 >gi|23336033|ref|ZP_00121262.1| COG0796: Glutamate racemase [Bifidobacterium longum DJO10A] gi|23464712|ref|NP_695315.1| glutamate racemase [Bifidobacterium longum NCC2705] gi|189438967|ref|YP_001954048.1| glutamate racemase [Bifidobacterium longum DJO10A] gi|227546821|ref|ZP_03976870.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239620799|ref|ZP_04663830.1| glutamate racemase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|317481620|ref|ZP_07940656.1| Asp/Glu/Hydantoin racemase [Bifidobacterium sp. 12_1_47BFAA] gi|322689588|ref|YP_004209322.1| glutamate racemase [Bifidobacterium longum subsp. infantis 157F] gi|322691549|ref|YP_004221119.1| glutamate racemase [Bifidobacterium longum subsp. longum JCM 1217] gi|29839545|sp|Q8G7Z8|MURI_BIFLO RecName: Full=Glutamate racemase gi|229486231|sp|B3DQ51|MURI_BIFLD RecName: Full=Glutamate racemase gi|23325278|gb|AAN23951.1| glutamate racemase [Bifidobacterium longum NCC2705] gi|189427402|gb|ACD97550.1| Glutamate racemase [Bifidobacterium longum DJO10A] gi|227212783|gb|EEI80664.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239516375|gb|EEQ56242.1| glutamate racemase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|316916980|gb|EFV38366.1| Asp/Glu/Hydantoin racemase [Bifidobacterium sp. 12_1_47BFAA] gi|320456405|dbj|BAJ67027.1| glutamate racemase [Bifidobacterium longum subsp. longum JCM 1217] gi|320460924|dbj|BAJ71544.1| glutamate racemase [Bifidobacterium longum subsp. infantis 157F] Length = 264 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 102/263 (38%), Gaps = 13/263 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GG+ V +++ MP H +Y D PYG ++ + + Sbjct: 4 SAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVERFV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--------GLIS 124 + VIACNTA + ++LR + + +G PA+K A + Sbjct: 64 -RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TP TLR + L+ + S I L VE G D + + + G F Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + + + D +VL CTH+ FR+L P +D ++ R +L + Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPED 238 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 + P + L + Sbjct: 239 ATGGVELANSDPSERIAELSRKL 261 >gi|329666855|gb|AEB92803.1| glutamate racemase [Lactobacillus johnsonii DPC 6026] Length = 266 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 97/265 (36%), Gaps = 15/265 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ + Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + +L K + + CNTA + ++ P AA T++ Sbjct: 53 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMATIQKEIPLQIIGVVQSGALAAARTTETKN 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++++ T AT+ I + + + LA EE ED + Sbjct: 112 VAVIGTKATVASHSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----DPDEDTKSAVVSE 166 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYPL+ + +D +D +A+ +L R + Sbjct: 167 SLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFAE 226 Query: 243 RVFD-DHALFLSGKPDIAMRRLMQG 266 H + +G+ Q Sbjct: 227 STDPVKHDYYTTGEAKKFTEITRQW 251 >gi|238853843|ref|ZP_04644208.1| glutamate racemase [Lactobacillus gasseri 202-4] gi|311111115|ref|ZP_07712512.1| glutamate racemase [Lactobacillus gasseri MV-22] gi|238833538|gb|EEQ25810.1| glutamate racemase [Lactobacillus gasseri 202-4] gi|311066269|gb|EFQ46609.1| glutamate racemase [Lactobacillus gasseri MV-22] Length = 266 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 98/265 (36%), Gaps = 15/265 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ + Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSKEEIIS 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + +L K + + CNTA + ++ P AA T++ Sbjct: 53 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMSTIKKEIPLQIIGVVQSGALAAARTTETKN 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++++ T AT+ I + + + LA EE E+ + + Sbjct: 112 VAVIGTKATVNSHSYLKEIQYRDPKIQVSEFAQPKLAPLAEE-----DPAEEIKQAVVSE 166 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTHYPL+ + +D +D +A+ +L R Sbjct: 167 SLAPLKKADYDTLVLGCTHYPLLRKEIVAVVGQDRKIVDPADQVAQYTYNVLRRDGLFAA 226 Query: 243 RVFD-DHALFLSGKPDIAMRRLMQG 266 D H + +G+ Q Sbjct: 227 GNSDTKHEYYTTGEAKKFTEITRQW 251 >gi|288800322|ref|ZP_06405780.1| glutamate racemase [Prevotella sp. oral taxon 299 str. F0039] gi|288332535|gb|EFC71015.1| glutamate racemase [Prevotella sp. oral taxon 299 str. F0039] Length = 281 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 12/262 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + + I +FDSG GGL +L+ R +P+Y++IY+ D+ PYG+ + + Sbjct: 5 QNNIAGPIGVFDSGYGGLTILEAFRKELPQYNYIYLGDNARAPYGSRSFDVVYEFTRQAV 64 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDEL-RSTFPSM-----AFLGAV-PAIKQAAAYTQSG 121 + + L ++ CNTA + R P M LG + P ++ T + Sbjct: 65 MKLFE-LGCRLIILGCNTASAKALRTIQRHDLPQMDNSLRRVLGIIHPTVEVIGDLTHTN 123 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + IL+T T++ + I+ + VS + +E + + +KK I+ Sbjct: 124 HVGILATEGTIKSNSYALEINKLHPDITVTGVSCPLWVPIIENNEADGEGADYFVKKRID 183 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 I + D ++L CTHYPL++ ++ +P V + +A+ L R + + Sbjct: 184 T--IMSLDSQIDTLILGCTHYPLLLPKIKKYTPKGVQVVAQGQYVAKSLANYLQRHSDIE 241 Query: 242 TRVFDD--HALFLSGKPDIAMR 261 + + + Sbjct: 242 QLCIKQGVTQYYTTENAERFKE 263 >gi|120434578|ref|YP_956873.1| glutamate racemase [Gramella forsetii KT0803] gi|117576728|emb|CAL65197.1| glutamate racemase [Gramella forsetii KT0803] Length = 264 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 8/252 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GG + +++ L+P + IY++D PYG + + + +L Sbjct: 5 RPIGIFDSGVGGTSIWKEIHRLLPLENTIYLSDSRNAPYGIKTQEKIIQLSIKNTEKLL- 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K L V+ACNTA T LRS + + A +G PAIK AA + + I IL+T TL Sbjct: 64 KLDCKLIVVACNTATTNAIRILRSAYKT-AIIGIEPAIKPAALKSANKAIGILATRGTLT 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + Y ++ V L +E K DE KK + G + D Sbjct: 123 SELFAQTSELYTRDINVIEVEGNGLVELIENG----KKDADETKKLLLGLLDPMLKAKID 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--ALF 251 +VL C+HYP ++ + ++ P V +D+ +++AR+ + +L + + Sbjct: 179 YLVLGCSHYPYLIPLLEEILPPEVKIIDSGEAVARQTKNILENNGLLNISKENTRTPEFY 238 Query: 252 LSGKPDIAMRRL 263 + P + + Sbjct: 239 TNSDPQVLSDII 250 >gi|108804439|ref|YP_644376.1| glutamate racemase [Rubrobacter xylanophilus DSM 9941] gi|108765682|gb|ABG04564.1| glutamate racemase [Rubrobacter xylanophilus DSM 9941] Length = 281 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 96/251 (38%), Gaps = 9/251 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL VL ++R +P H IY D PYG + ++ + ++ Sbjct: 5 RPIGVFDSGVGGLTVLAEIRDRLPYEHTIYFGDTARVPYGVRDLAEVRWFAYEIIRYLVS 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 L VIACNTA + +F P + A T++ + +L+TPAT+ Sbjct: 65 -LNVKLVVIACNTATAAALMTAQRSFDVPIIGVIEPGARAAVLETRNRRVGVLATPATVE 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + I + ++ ++ +E E++ + + D Sbjct: 124 SGAYAKAISYLDAGIEVYEQAAPEFVPLIERGITSGP----ELEAAARRYLAPLQERGAD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ----TRVFDDHA 249 V++L CTHYPLI ++ V + ++ A +L R + Sbjct: 180 VVILGCTHYPLISETINRILGPRVRLISSAGQTALEVGRVLSRRGYLRRPRHAEDLGSSV 239 Query: 250 LFLSGKPDIAM 260 + P+ Sbjct: 240 YVCTADPEEFA 250 >gi|326693298|ref|ZP_08230303.1| glutamate racemase [Leuconostoc argentinum KCTC 3773] Length = 281 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 93/258 (36%), Gaps = 8/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I DSG+GGL V++ + +P FI++ D PYG + + +L Sbjct: 4 NNPIGFVDSGVGGLTVVKAAQDQLPHEQFIFIGDTARMPYGPRPVQEVIDYTFQMAQFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 L VIACNTA +L++ P + +G + P AAA T + I +++T T Sbjct: 64 TVKHIKLLVIACNTATARALPQLQAQLP-IPVIGVIVPGATAAAATTGNQKIGVIATQGT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + I + + I + E +D + + + + Sbjct: 123 VTSGAYQDEIQAVNADVTIFQQAEPDFVQLAEANLAQAATTKDIVAQHLAS----LTAQG 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHA 249 D +VL CTH+PL+ V +D + L + H D Sbjct: 179 IDTLVLGCTHFPLLAEAITAAVGPNVKLVDPGRKTVQVIIDTLDQQALHTAVPHRHADDI 238 Query: 250 LFLSGKPDIAMRRLMQGF 267 + + +P Sbjct: 239 FYTTKEPATFKAIATDWL 256 >gi|153952784|ref|YP_001393549.1| glutamate racemase [Clostridium kluyveri DSM 555] gi|219853449|ref|YP_002470571.1| hypothetical protein CKR_0106 [Clostridium kluyveri NBRC 12016] gi|189030359|sp|A5N4H0|MURI_CLOK5 RecName: Full=Glutamate racemase gi|254766113|sp|B9DY32|MURI_CLOK1 RecName: Full=Glutamate racemase gi|146345665|gb|EDK32201.1| MurI [Clostridium kluyveri DSM 555] gi|219567173|dbj|BAH05157.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 257 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 7/232 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GG+ VL++ ++ +F+Y D PYG +KK +L Sbjct: 5 DRPIGFFDSGVGGISVLKEAVKILSNENFVYFGDSKMAPYGVRTVEEVKKLTFNAVEFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 K V+ACNTA + +LR + M +G PA+K A + G I I++TP T Sbjct: 65 KK-NIKALVVACNTATSAAIIDLRKAYSKYMPIVGIEPALKPAVECNRKGNIIIMATPMT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L + +NL+ Y S +I + L +EE K + +EI++ +E I +G Sbjct: 124 LAESKFNNLMKRY-SNSNILPLPCSGLVELIEEG----KTEGEEIERYLEEKLIPLKGNG 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 +VL CTHYP I ++ V LD S R+ + L + + + Sbjct: 179 IAAVVLGCTHYPFIKKSISKVLNQDVLILDGSKGTVRQLKRQLIKYHIESNK 230 >gi|257467248|ref|ZP_05631559.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563] gi|315918376|ref|ZP_07914616.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563] gi|313692251|gb|EFS29086.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563] Length = 261 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 6/240 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL + ++P+ +FIY AD PYG + K ++ K Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADVDHVPYGTKTKEEIIKYTSEAVDFLV-KE 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA + ELR + S+ +G PA+K+A + + +++TP T++ Sbjct: 62 GVKAIVIACNTATSAAIQELRERY-SLPIIGMEPAVKKAIDFHPEKRVLVIATPMTVQGE 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NLI ++ + ++ L + EE +++ I ++ F + + I Sbjct: 121 KLHNLIEKVDTEHLVDAIALPKLVTFAEE----EIFEDEVISAYLQEEFKQLNLEDYSSI 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ ++L P V +LD ++ ++ L IN + + SG+ Sbjct: 177 VLGCTHFNYFKESLKKLLPKGVKFLDGNEGTIKKLISELENINALEKNEKRKIEYYYSGR 236 >gi|171742432|ref|ZP_02918239.1| hypothetical protein BIFDEN_01543 [Bifidobacterium dentium ATCC 27678] gi|171278046|gb|EDT45707.1| hypothetical protein BIFDEN_01543 [Bifidobacterium dentium ATCC 27678] Length = 262 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 97/256 (37%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ V +++R MP +Y D PYG ++ + + Sbjct: 9 APIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTKTPKQVRDLSFAIVERFV- 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131 + VIACNTA + D LR + + +G PA+K A Q + + +TP T Sbjct: 68 QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 LR + L+ + S I L VE+ D + + + F + Sbjct: 127 LRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRYDLST 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+ FR+L P +D + R +L + Sbjct: 184 IDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVGGIEL 243 Query: 252 LSGKPDIAMRRLMQGF 267 + + L + Sbjct: 244 ANSDTSERIAELAEAL 259 >gi|319794071|ref|YP_004155711.1| glutamate racemase [Variovorax paradoxus EPS] gi|315596534|gb|ADU37600.1| glutamate racemase [Variovorax paradoxus EPS] Length = 265 Score = 262 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 12/259 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL VL +R +P F+Y AD PYG D + +R + ++ Sbjct: 2 KPVGVFDSGVGGLSVLAALRAELPHERFVYFADTAFAPYGERGDDYVIERSRKVTEQLIA 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 ++ V+ACNTA T LR+ P++ +G PA+K A A +++G IS+++T TL Sbjct: 62 EHGIGALVVACNTATTAAIHLLRAEHPALPIVGLEPALKPAVATSRTGHISVMATRGTLA 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-----E 188 + L S+ + V L +E + + I E Sbjct: 122 SAKYAALRDSFAGSATVRAVPCDGLVKAIE------GLDTEAIATLCARYMAEAGPFGDA 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D +VL CTHYPL+ ++ +P + ++D +A++ R +L Sbjct: 176 AGEVDTVVLGCTHYPLVKDQLQRHAPATLRFIDTGAPVAQQTRRVLTAAGRLSGGE-GGL 234 Query: 249 ALFLSGKPDIAMRRLMQGF 267 L SG + + Sbjct: 235 ILQSSGDQSVLEVAAARWL 253 >gi|269795791|ref|YP_003315246.1| glutamate racemase [Sanguibacter keddieii DSM 10542] gi|269097976|gb|ACZ22412.1| glutamate racemase [Sanguibacter keddieii DSM 10542] Length = 268 Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 12/262 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P Y+ D PYG ++ + + ++ Sbjct: 3 NAPIGIFDSGVGGLTVARSILDQLPHESIHYIGDTRHSPYGPKPLATVRALALDVMDSLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAV-PAIKQAAAYTQSGLISILST 128 D+ + VIACN+A + + R + + + + PA ++A A T++G + ++ T Sbjct: 63 DQG-VKMLVIACNSASAAVLRDARERYTVRHGIPVVEVILPAARRAVAATRTGRVGVIGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + + + + + + S VE + + Sbjct: 122 RATIESRAYEDAL-AVAAGISVTGQACPDFVSLVESGVTSGP----AVLEVSRRYLEPVI 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD- 247 D ++L CTHYPL+ + V + +++ A+ L + + Sbjct: 177 AADVDTLILGCTHYPLLTGAISYVMGESVTLVSSAEETAKDVYRTLVAHDLARDENAGPA 236 Query: 248 -HALFLSGKPDIAMRRLMQGFG 268 H +G + G Sbjct: 237 THRFQSTGDTSSFSVLARRFLG 258 >gi|283456482|ref|YP_003361046.1| glutamate racemase [Bifidobacterium dentium Bd1] gi|283103116|gb|ADB10222.1| MurI Glutamate racemase [Bifidobacterium dentium Bd1] Length = 258 Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 97/256 (37%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ V +++R MP +Y D PYG ++ + + Sbjct: 5 APIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTKTPKQVRDLSFAIVERFV- 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131 + VIACNTA + D LR + + +G PA+K A Q + + +TP T Sbjct: 64 QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 LR + L+ + S I L VE+ D + + + F + Sbjct: 123 LRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRYDLST 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+ FR+L P +D + R +L + Sbjct: 180 IDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVGGIEL 239 Query: 252 LSGKPDIAMRRLMQGF 267 + + L + Sbjct: 240 ANSDTSERIAELAEAL 255 >gi|306822342|ref|ZP_07455721.1| glutamate racemase [Bifidobacterium dentium ATCC 27679] gi|304554340|gb|EFM42248.1| glutamate racemase [Bifidobacterium dentium ATCC 27679] Length = 262 Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 97/256 (37%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ V +++R MP +Y D PYG ++ + + Sbjct: 9 APIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTRTPKQVRDLSFAIVERFV- 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131 + VIACNTA + D LR + + +G PA+K A Q + + +TP T Sbjct: 68 QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 LR + L+ + S I L VE+ D + + + F + Sbjct: 127 LRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRYDLST 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+ FR+L P +D + R +L + Sbjct: 184 IDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVGGIEL 243 Query: 252 LSGKPDIAMRRLMQGF 267 + + L + Sbjct: 244 ANSDTSERIAELAEAL 259 >gi|291280169|ref|YP_003497004.1| glutamate racemase [Deferribacter desulfuricans SSM1] gi|290754871|dbj|BAI81248.1| glutamate racemase [Deferribacter desulfuricans SSM1] Length = 253 Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 8/220 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSGIGGL V + + P+ Y D PYG + K ++ Sbjct: 2 AIGVFDSGIGGLTVFRTIAKEFPKLDIYYFGDTARVPYGIRSKDTIIKYTTECIDYLVKH 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 Y VIACN+A + D L+ F ++ LG + P ++ A T++ I ++ T AT+ Sbjct: 62 YNLEAIVIACNSASSYAIDSLKIKF-NLPVLGVIDPGVRAALTTTKTNNILVIGTKATVN 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 N I+ I+ + + VEE K+ E +K+ + + D Sbjct: 121 SNAYPNKINQISPLTKIYQQACPLFVPIVEEGLFNHKVAETMVKEYLSPYI-----DKID 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 ++L CTHYPL+ +L P ++ +D+S +I R L Sbjct: 176 TVILGCTHYPLLKETISKLYP-DLNLVDSSIAILDDLRNL 214 >gi|309802168|ref|ZP_07696277.1| glutamate racemase [Bifidobacterium dentium JCVIHMP022] gi|308221248|gb|EFO77551.1| glutamate racemase [Bifidobacterium dentium JCVIHMP022] Length = 258 Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 97/256 (37%), Gaps = 7/256 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ V +++R MP +Y D PYG ++ + + Sbjct: 5 APIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTRTPKQVRDLSFAIVERFV- 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131 + VIACNTA + D LR + + +G PA+K A Q + + +TP T Sbjct: 64 QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 LR + L+ + S I L VE+ D + + + F + Sbjct: 123 LRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRYDLST 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+ FR+L P +D + R +L + Sbjct: 180 IDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVGGIEL 239 Query: 252 LSGKPDIAMRRLMQGF 267 + + L + Sbjct: 240 ANSDTSERIAELAEAL 255 >gi|323706012|ref|ZP_08117582.1| glutamate racemase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534626|gb|EGB24407.1| glutamate racemase [Thermoanaerobacterium xylanolyticum LX-11] Length = 263 Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 9/247 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL VL+K++ L+P +IY D PYG+ ++ + + + Sbjct: 3 RRPIGVFDSGVGGLTVLKKLKELLPNEDYIYFGDTKRVPYGDKSKGEIEMYARQIINFMN 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K + VIACNT I + + + F + AA T++ + +++T T+ Sbjct: 63 EK-NTKIIVIACNTTCASID---KDEYKEILFSVLEAGAESAADITKNNKVGVIATTRTV 118 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 I + + VE+ + DE K + + Sbjct: 119 ESGSYEKSIRLKNGDVDVFQKACPGFVPLVEKGLS----ESDESFKLAKEYLKALNDEGI 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTHYP++++ + + V +D + ++ L + H F+ Sbjct: 175 DTLVLGCTHYPILLNAIKNAAREDVLIVDPAVRLSHDVMNYLKENDMLNLTGGVTH-YFV 233 Query: 253 SGKPDIA 259 SG Sbjct: 234 SGDAKKF 240 >gi|332830408|gb|EGK03036.1| glutamate racemase [Dysgonomonas gadei ATCC BAA-286] Length = 275 Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 101/259 (38%), Gaps = 11/259 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL +L +++ LMPEY + Y+ D+ PYG+ + + + D Sbjct: 5 GPIGVFDSGYGGLTILSEIQSLMPEYDYCYLGDNSRAPYGSRSFDVVYEFTKQAVLSLFD 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 L ++ACNTA ++ P LG + P + TQS + IL Sbjct: 65 -MGCNLVILACNTASAKALRTIQQKDLPHIDPDKRVLGVIRPTAEIIGPITQSRHVGILG 123 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ S I+ + + + VE + + IKK + Sbjct: 124 TTGTIQSESYSIEINKLFPDIKVSGEACPMWVPLVENREYENEGADYFIKKNLSNILS-- 181 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245 + + D ++L CTHYP++++ + P V + + IAR + L R Sbjct: 182 KDPQIDTLILGCTHYPILLNKIKSFLPDGVTAIAQGEYIARSLQDYLHRHPEMDKVCTKG 241 Query: 246 DDHALFLSGKPDIAMRRLM 264 + + P Sbjct: 242 SVTKYYTTESPQKFSEAAT 260 >gi|212633112|ref|YP_002309637.1| glutamate racemase [Shewanella piezotolerans WP3] gi|226722989|sp|B8CH57|MURI_SHEPW RecName: Full=Glutamate racemase gi|212554596|gb|ACJ27050.1| Glutamate racemase [Shewanella piezotolerans WP3] Length = 268 Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 8/263 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ILIFDSGIGGL +L ++R +MP+ Y+ D+ PYG E+ L + L + Sbjct: 1 MSGPILIFDSGIGGLSILDEIRKVMPQQSCCYLFDNARLPYGELEESELISGCVSLIIEQ 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + V+ACN+A TL+ LR S+ +G VPAIK AA ++ I +L+TP T Sbjct: 61 AMRINAGIVVVACNSASTLVLTTLREQL-SIPVVGVVPAIKPAAKISKRRHIGLLATPGT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI ++ C + L S L E G + +++E Sbjct: 120 IKRPYTKQLIDAFAEDCRVELFGSSELVMLAEAKLAGTAVD----MQKLELLLAPIRTSE 175 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFDDH 248 D +VL CTH+P++ +Q + LD+ ++A R LL +T +V D Sbjct: 176 LDTLVLGCTHFPVLATEIKQSLGQSIILLDSGKAVADRVLSLLKGNGLPKTASNKVVDYS 235 Query: 249 ALFLSGKPDIAMRRLMQGFGLKS 271 A+F + +++ + G S Sbjct: 236 AVFTTDDIAQGLKKRLVEEGFTS 258 >gi|213691663|ref|YP_002322249.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254766108|sp|B7GPZ1|MURI_BIFLI RecName: Full=Glutamate racemase gi|213523124|gb|ACJ51871.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457754|dbj|BAJ68375.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 264 Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 103/263 (39%), Gaps = 13/263 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GG+ V +++ MP H +Y D PYG ++ + + Sbjct: 4 SAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVERFV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--------GLIS 124 + VIACNTA + ++LR + + +G PA+K A + Sbjct: 64 -RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TP TLR + L+ + SQ I L VE G D + + + G F Sbjct: 122 VAATPLTLRERKFATLMDRFDSQNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + + + D +VL CTH+ FR+L P +D ++ R +L + Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPEG 238 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 + P + L + Sbjct: 239 ATGGVELANSDPSERIAELSRKL 261 >gi|90423117|ref|YP_531487.1| glutamate racemase [Rhodopseudomonas palustris BisB18] gi|90105131|gb|ABD87168.1| glutamate racemase [Rhodopseudomonas palustris BisB18] Length = 265 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 103/258 (39%), Positives = 151/258 (58%), Gaps = 2/258 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +IL+FDSG+GGL VL+++ P+ ++YVADD FPYG + AL R++ L ++ Sbjct: 3 ASPTILVFDSGLGGLTVLREIVKARPDAGYVYVADDAFFPYGQHGEDALIARVVPLIGEL 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + ++P L VIACNTA TL+ LR+ + + F+G VPAIK A A +++ +S+L T T Sbjct: 63 IAAHRPDLVVIACNTASTLVLSHLRAAYK-VPFVGTVPAIKPACAASRTKRVSVLGTSGT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++R YT LI + C + LV S LA+ E G + + +I EI CF++ G R Sbjct: 122 VKREYTRALIRDFAQACKVTLVGSAHLAALAEAALAGASVGDAQILAEIAPCFVDDGGAR 181 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL- 250 TD +VLACTH+PL++ L+PWPVDW+D + +IARR LL + L Sbjct: 182 TDAVVLACTHFPLLLDRLVALAPWPVDWIDPAPAIARRVANLLGGGVGGAAGAPREARLI 241 Query: 251 FLSGKPDIAMRRLMQGFG 268 F SG+ A L+ FG Sbjct: 242 FTSGRRHPASGALLPFFG 259 >gi|227888697|ref|ZP_04006502.1| glutamate racemase [Lactobacillus johnsonii ATCC 33200] gi|227850724|gb|EEJ60810.1| glutamate racemase [Lactobacillus johnsonii ATCC 33200] Length = 266 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 99/265 (37%), Gaps = 15/265 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ + Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + +L K + + CNTA + ++ P AA T++ Sbjct: 53 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMSTIQKEIPLQIIGVVQSGALAAARTTETKN 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++++ T AT+ I + + + LA EE ED + Sbjct: 112 VAVIGTKATVDSHSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----DPDEDTKNAVVSE 166 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQ 241 + D +VL CTHYPL+ + +D +D +A+ +L R + + Sbjct: 167 SLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFAE 226 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQG 266 + H + +G+ Q Sbjct: 227 STALVKHDYYTTGEAKKFTEITRQW 251 >gi|326316343|ref|YP_004234015.1| glutamate racemase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373179|gb|ADX45448.1| Glutamate racemase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 288 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 108/275 (39%), Gaps = 11/275 (4%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 Q I +FDSG+GGL VL+ +R +P F+Y+AD PYG D + R + Sbjct: 1 MPSATQRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGHAPYGERGDAYVAARTHAI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + + V+ACNTA E+R+ + +G PA+K A A T++G + ++ Sbjct: 61 TTYLQQTHGIKALVVACNTATAAAIHEVRARHAGLPLVGVEPALKPALALTRTGRVGVIG 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCF 184 T TL L S + LA +E + EI+ Sbjct: 121 TRGTLASAKFQRLQASLQGAVEFVVQPCDGLAHAIERSTADTQPDAPATAEIRALCARYT 180 Query: 185 IEK-----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 D +VL CTHY + R + V ++ + +AR+ R LL T Sbjct: 181 AALGPFGTAPGEIDTLVLGCTHYIFAENALRAHTGPHVRLVETGEPVARQTRRLLEAAGT 240 Query: 240 HQT---RVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 T +LF +G + + L + Sbjct: 241 LATAHGPAAGTASLFTTGALPLLQAAAHRWLQLPA 275 >gi|295425843|ref|ZP_06818523.1| glutamate racemase [Lactobacillus amylolyticus DSM 11664] gi|295064446|gb|EFG55374.1| glutamate racemase [Lactobacillus amylolyticus DSM 11664] Length = 267 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 17/261 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG GG V++K+ +PE I++ D+ PYG+ + + Sbjct: 1 MDNRP--------IGLLDSGDGGFSVVKKVIKKLPEESTIFIGDNAHMPYGDKSKEEVIE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + +L + L + ACNTA ++ +G + A T++ Sbjct: 53 LTRHSVNFLLSR-DVKLIIFACNTATAAAMSTIQKEIK-PQIIGVIQSGSLAAVRTTENK 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TP T+ N I + + +++ LA VE + + + ++ Sbjct: 111 KVAVSATPVTIASHAYKNEIQVRDPEIEVTELATPKLAPLVEA-----EEDYNTNLRVVK 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-H 240 +GK D VL CTHYPLI F + P V +D +D +A+ ++ R Sbjct: 166 ESLKPLQGKDFDTFVLGCTHYPLIQKEFEEALPDNVSIVDPADQVAQYTFNVMRRDGLFA 225 Query: 241 QTRVFDDHALFLSGKPDIAMR 261 H + +G + R Sbjct: 226 APGSVARHEYYTTGDVEKFER 246 >gi|110835225|ref|YP_694084.1| glutamate racemase [Alcanivorax borkumensis SK2] gi|110648336|emb|CAL17812.1| glutamate racemase [Alcanivorax borkumensis SK2] Length = 263 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 7/255 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSGIGGL + +++R L+P + +YVAD V PYG +H +++R + ++D Sbjct: 5 GPIGVFDSGIGGLSIARRIRELLPHENLLYVADSVHAPYGEKAEHYIQQRADTITRFLID 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 V+ACNTA +LR+ + ++ +G P IK AA ++SG+I +L+T TL+ Sbjct: 65 -NNAKAIVVACNTATVSAIRQLRADY-TLPIIGVEPGIKPAALKSKSGVIGVLATSQTLK 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +NL + + + L ++E + + ++ + + K D Sbjct: 123 SESFNNLSRLFSESVCVEIQPCPGLVEQIE----VLDLDSEKTQALVARYVAPLIEKGAD 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFL 252 IVL CTHY + V R+++ + ++ ++AR L N T V A + Sbjct: 179 HIVLGCTHYAFLAPVIRRIAGAGIQVVNTDIAVARETLRRLQNANRLSTSVAPGQMAFWS 238 Query: 253 SGKPDIAMRRLMQGF 267 S ++A +++ + + Sbjct: 239 SAANELADQQIKRLW 253 >gi|186476698|ref|YP_001858168.1| glutamate racemase [Burkholderia phymatum STM815] gi|184193157|gb|ACC71122.1| glutamate racemase [Burkholderia phymatum STM815] Length = 303 Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 8/247 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + + IFDSG+GGL VL+ +R +P +YVAD + PYG +D + R + + Sbjct: 27 DPRAPVGIFDSGLGGLSVLRAVRSQLPSEAIVYVADSLYAPYGERDDDFIADRTLAIGEW 86 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ + L V+ACNTA +R P + +G P +K AA ++S + +L+T Sbjct: 87 LIAQGAKAL-VVACNTATAQSIALVREKLP-IQLIGVEPGVKPAAQQSKSRVAGVLATRV 144 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR L+ Y S C L VE I+ E++ + Sbjct: 145 TLRSARFQGLLERYASDCRFLCQPGHGLVEAVER----CDIESAELRALLVSYVQPMLDA 200 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDH 248 D +VL CTHYP + R ++ + +D S +IAR+ +L + Sbjct: 201 GADTLVLGCTHYPFLDAAIRDIAGDRLTLIDTSVAIARQLERVLDQQGLRSPERDTVPPP 260 Query: 249 ALFLSGK 255 + Sbjct: 261 RFCSTSD 267 >gi|119944401|ref|YP_942081.1| glutamate racemase [Psychromonas ingrahamii 37] gi|119863005|gb|ABM02482.1| glutamate racemase [Psychromonas ingrahamii 37] Length = 268 Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 131/263 (49%), Gaps = 12/263 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V ++R P Y+ D+ FPYG + L +RLM L S L ++ Sbjct: 6 VLIFDSGVGGLSVFDQVRKQSPGIKCFYLFDNAYFPYGELQADFLIQRLMSLLSSFLGRH 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACN+A T+ LR +F S+ +G VPAIK A T++G+I +L+TPAT+ Sbjct: 66 KIDLIVIACNSASTVALQYLRESF-SIPIVGVVPAIKPATFLTKNGVIGLLATPATINGA 124 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 YT+ LI + + + + S L E G I++ +I+ + D I Sbjct: 125 YTARLIDEFAADKQVLKIGSTQLVKLAELKLQGKLIQQADIEGVLAAWL--MLDTMPDTI 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS-- 253 VL CTH+PL+ + ++ +D+ ++IA+R LL T + H + + Sbjct: 183 VLGCTHFPLLKAEIFRCFKDKINLVDSGNAIAQRVTQLLGESEM--TAKENTHQAYFTKV 240 Query: 254 -----GKPDIAMRRLMQGFGLKS 271 A++R +G S Sbjct: 241 YQLDESTNFSALQRSFLAYGFNS 263 >gi|86750804|ref|YP_487300.1| glutamate racemase [Rhodopseudomonas palustris HaA2] gi|86573832|gb|ABD08389.1| glutamate racemase [Rhodopseudomonas palustris HaA2] Length = 264 Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 97/245 (39%), Positives = 148/245 (60%), Gaps = 4/245 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +IL+FDSG+GGL VL+++ L P+ ++YV DD FPYG + A+ R++ L +++ Sbjct: 4 HPNILVFDSGLGGLTVLREVVKLRPDARYVYVGDDAFFPYGQKSEEAVIGRVVPLIGELI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ P L VIACNTA T+ LR+ + ++ F+G VPAIK A A +++ +S+L T T+ Sbjct: 64 AEHAPDLVVIACNTASTMTLAPLRARY-AVPFVGTVPAIKPACAASRTKRVSVLGTSGTV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR- 191 R YT LI + C ++LV S+ LA+ E G + ++ I+ EI CF+ +G Sbjct: 123 RLEYTRALIRDFAGGCDVNLVGSVHLAALAEAALGGADVPDEAIRAEIAPCFVAGDGADD 182 Query: 192 -TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 TD IVLACTHYPL++ +L+PWPVDW+D + +IARR LL + + Sbjct: 183 RTDSIVLACTHYPLLLDRLVRLAPWPVDWIDPAPAIARRVATLLG-AGSGHGDAPGVRMV 241 Query: 251 FLSGK 255 F SG+ Sbjct: 242 FTSGR 246 >gi|254251913|ref|ZP_04945231.1| Glutamate racemase [Burkholderia dolosa AUO158] gi|124894522|gb|EAY68402.1| Glutamate racemase [Burkholderia dolosa AUO158] Length = 285 Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 10/244 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL VL+ +R +P FIYVAD PYG +D + +R + + ++ + Sbjct: 15 PIGIFDSGLGGLSVLRAVRAHLPGESFIYVADARYVPYGERDDAFITERTIAIGEWLVGQ 74 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L VIACNTA R ++ +G P IK A + SG+ +L+T +TLR Sbjct: 75 RAKAL-VIACNTATAQSIAAARERL-AIPVVGVEPGIKPAVQQSASGVAGVLATQSTLRS 132 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ + + C L +E G ++ + + D Sbjct: 133 ARFQALLERHGAGCRFICQPGHGLVQAIERGDTG----SPALRALLADYLHRMLDEGADT 188 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHALF 251 +VL CTHYP ++ R + + +D SD+IAR+ +L + + TR Sbjct: 189 VVLGCTHYPFLIATIRDIVGDRLSIVDTSDAIARQLVRVLDQHDLRAPDDTRAAPP-RFC 247 Query: 252 LSGK 255 +G+ Sbjct: 248 STGE 251 >gi|81428019|ref|YP_395018.1| glutamate racemase [Lactobacillus sakei subsp. sakei 23K] gi|123564670|sp|Q38YM1|MURI_LACSS RecName: Full=Glutamate racemase gi|78609660|emb|CAI54706.1| Glutamate racemase [Lactobacillus sakei subsp. sakei 23K] Length = 274 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 97/256 (37%), Gaps = 7/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I DSG+GGL ++++ R +P +++ D PYG +++ + + L Sbjct: 3 KQPIGFMDSGVGGLTLVKEARKRLPNEDMVFIGDQARLPYGEKPAATVREFAWQMAN-FL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + VIACNTA +L++ ++ +G + P A T + + +++T T Sbjct: 62 RHQEIKALVIACNTATAAALPDLQAQL-AIPVIGVIKPGSIAALQTTHNRRVGVIATTGT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ S + + + +++ + +E ++ + + Sbjct: 121 IQSAAYSQQMAALNPDVQVTGLAAPQFVTMIEANQR----HGQAVQTIVNQILQPLQKSE 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PL+ + V ++ + +L + T ++ Sbjct: 177 IDTLVLGCTHFPLLTTAIQTAVGPDVTLVNPAVQAITMLEEVLTQQQQLATTTPGTLRMY 236 Query: 252 LSGKPDIAMRRLMQGF 267 +G Q Sbjct: 237 TTGSVAAFEEIAQQWL 252 >gi|268318989|ref|YP_003292645.1| hypothetical protein FI9785_498 [Lactobacillus johnsonii FI9785] gi|262397364|emb|CAX66378.1| murI [Lactobacillus johnsonii FI9785] Length = 266 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 100/266 (37%), Gaps = 17/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL VL+K+ MP I++ D PYG+ + Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + +L K + + CNTA ++ P + +G + AA T++ Sbjct: 53 LTRDSVNFLLSK-DVKIIIFGCNTATAAAMSTIQKEIP-LQIIGVIQSGALAAARTTETK 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++++ T AT+ I + + + LA EE ED + Sbjct: 111 NVAVIGTKATVDSHSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----DPDEDIKNAVVS 165 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CTHYPL+ + +D +D +A+ +L R + Sbjct: 166 ESLTPLKNADYDTLVLGCTHYPLLREEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFA 225 Query: 242 TRVFD-DHALFLSGKPDIAMRRLMQG 266 H + +G+ Q Sbjct: 226 ESTAPVKHDYYTTGEAKKFTEITRQW 251 >gi|169350167|ref|ZP_02867105.1| hypothetical protein CLOSPI_00911 [Clostridium spiroforme DSM 1552] gi|169292950|gb|EDS75083.1| hypothetical protein CLOSPI_00911 [Clostridium spiroforme DSM 1552] Length = 261 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 113/249 (45%), Gaps = 8/249 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I +FDSG+GGL VL ++ L+P + IY+ D+ PYG+ L K + Sbjct: 1 MERAIGVFDSGVGGLTVLNSIKSLLPNENIIYIGDNYHCPYGDKTPAQLFKYASGIVEYF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + K L V+ACNT + + + L+ T+P + +G + A + I++T AT Sbjct: 61 I-KQNVKLIVLACNTTSSTVLERLQMTYPEVMIIGVIDATVNDFINRKVANTLIIATVAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ I S+ +++ L VE ++ I + E + R Sbjct: 120 IKSNKYPETIKQIDSKIETFSLATPKLVPLVESGKY-----KEGIYDILHEYLDEYKE-R 173 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 I+L CTHYP++ + P ++++ +S++I++ + +L R ++ Sbjct: 174 IQSIILGCTHYPILKEQIENVLP-NIEYVSSSEAISKSVKDILLRKKLLNFNKCSYTKIY 232 Query: 252 LSGKPDIAM 260 +G D + Sbjct: 233 TTGDVDEFI 241 >gi|71280369|ref|YP_268000.1| glutamate racemase [Colwellia psychrerythraea 34H] gi|71146109|gb|AAZ26582.1| glutamate racemase [Colwellia psychrerythraea 34H] Length = 256 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 7/251 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL + + + +P + IY+AD + PYG + KR+ ++ ++DK Sbjct: 1 MFDSGVGGLSIAKCITEQLPHENIIYIADSLHAPYGEKSVEFIIKRVNYIAKQLIDKG-V 59 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 VIACNTA ++LRS S+ +G PAIK AA + S ++IL+T AT Sbjct: 60 KAIVIACNTATVNAIEQLRSQV-SIPIIGVEPAIKPAAKQSISKKVAILATQATSENQRF 118 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +LI + + +H+ L +E+ +K+ I E D +VL Sbjct: 119 KDLIDLHHNGAEVHIQPCPGLVEFIEQGNQNSDDCNALLKQYINPLIKE----GIDTLVL 174 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALFLSGKP 256 CTHYP + ++ V ++ + + + L + + F S + Sbjct: 175 GCTHYPFVQKQISLIAGQQVTIIETAAPVTVQLSKKLVEREISACKTQQGQYQFFSSLET 234 Query: 257 DIAMRRLMQGF 267 + Q + Sbjct: 235 KQQEQIFSQLW 245 >gi|323498757|ref|ZP_08103744.1| glutamate racemase [Vibrio sinaloensis DSM 21326] gi|323316185|gb|EGA69209.1| glutamate racemase [Vibrio sinaloensis DSM 21326] Length = 262 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 12/261 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q ++LIFDSG+GGL V +++ ++P+ ++ Y+ D+ +PYG E L R+ L ++ Sbjct: 4 QANVLIFDSGVGGLSVYEEIARILPQLNYTYIFDNEAYPYGELEHDTLIHRVDALIGSLV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + L VIACNTA T++ LR P + +G VPAIK A+ + + +++TPAT+ Sbjct: 64 KEQEIDLVVIACNTASTIVLPTLRQRLP-IPIVGVVPAIKPASNM-ANIAVGLIATPATV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT +LI S+ + L+ S L EE G + E+ + + Sbjct: 122 TRQYTHDLIRSFSQSKPVELLGSTRLVDMAEEKLRGKALDLQELSQILAP-----ISGHI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV VL CTH+PLI +Q+ V +D+ +IARR + LL + +F Sbjct: 177 DVAVLGCTHFPLIKQEIQQVLGSSVLLVDSGKAIARRVQALL---GIEKQEWLGRREIFS 233 Query: 253 SGKP--DIAMRRLMQGFGLKS 271 + P + A+ R + S Sbjct: 234 TAPPWEEGALNRALTHLEFSS 254 >gi|226357251|ref|YP_002786991.1| glutamate racemase [Deinococcus deserti VCD115] gi|226319241|gb|ACO47237.1| putative glutamate racemase [Deinococcus deserti VCD115] Length = 283 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 9/249 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GGL VL ++R MP ++Y+AD P G D ++ S + Sbjct: 5 APVGVFDSGVGGLSVLAELRRAMPHEEYLYLADTAHVPIGARSDEEIRDLTDRAVSALHA 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA LR+ F ++ +G VPA+K A T+SG++ +L+TP TLR Sbjct: 65 RGVKG-VVVACNTASAFSLSHLRARF-AIPIIGLVPAVKPAVEATRSGVVGVLATPGTLR 122 Query: 134 RTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 T +++I + + + S L VE E + + Sbjct: 123 GTLLADVIRQFADPAGVKVLQAVSRELVPLVEAGQA----DSSETQAVLREVLSPLVQAG 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250 D +VL CTHYP + +D+ ++AR R +L N R Sbjct: 179 ADQLVLGCTHYPFLAGSIHAEFGNCFTLVDSGAAVARHTRRVLAAENLLTARTETGKVTY 238 Query: 251 FLSGKPDIA 259 ++G D A Sbjct: 239 LVTGDVDAA 247 >gi|153937979|ref|YP_001392916.1| glutamate racemase [Clostridium botulinum F str. Langeland] gi|166231035|sp|A7GJF6|MURI_CLOBL RecName: Full=Glutamate racemase gi|152933875|gb|ABS39373.1| glutamate racemase [Clostridium botulinum F str. Langeland] gi|295320892|gb|ADG01270.1| glutamate racemase [Clostridium botulinum F str. 230613] Length = 257 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 64 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELNKGGKIIIMATPMTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL+ Y I + L +E+ + D I ++ F + + ++ Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 IVL CTHYP I ++++ +D S +R + L N + Sbjct: 179 SSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREE 229 >gi|163781564|ref|ZP_02176564.1| glutamate racemase [Hydrogenivirga sp. 128-5-R1-1] gi|159882784|gb|EDP76288.1| glutamate racemase [Hydrogenivirga sp. 128-5-R1-1] Length = 255 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 11/231 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL VL+ +R P Y+ D PYG + + + ++ L + Sbjct: 3 VGVFDSGVGGLTVLKAIREKFPRIDLFYLGDTARVPYGTKSPDTVIRYSVE-CAEFLSEK 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 + V+ACNTA + + L S ++ LG V P +++A + T+ G + ++ T AT+R Sbjct: 62 SVDVLVVACNTASSYALETLTSML-TIPVLGVVEPGVRKALSLTK-GRVGVIGTSATIRS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + + + + + VEE I E + +E E K D Sbjct: 120 EAYQHRLRE--AGVEVFSKACPLFVPLVEEGLVEGDITE----RVVEFYLKEFREKGIDT 173 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 ++L CTHYPL+ + + + +D+SD++A L+ +F Sbjct: 174 LILGCTHYPLLKNTIKNFL-KGTEVVDSSDAVAEELSSLVEDEGQGAIELF 223 >gi|303229117|ref|ZP_07315918.1| glutamate racemase [Veillonella atypica ACS-134-V-Col7a] gi|302516130|gb|EFL58071.1| glutamate racemase [Veillonella atypica ACS-134-V-Col7a] Length = 269 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 7/254 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG+GGL VL+ ++ P +FIY+ D+ P GN + + + + L + Sbjct: 10 PIGVFDSGVGGLSVLKVLQEQFPNENFIYIGDNANNPVGNRPTEEITEIACRIA-ETLHQ 68 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L VIACNT + DE+RS ++ +G +K A + S I I++T AT+ Sbjct: 69 VPVKLMVIACNTFTVVALDEVRSRV-NVPVIGVSQGVKTAIRESNSNTIGIMATVATVNS 127 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + + LA +E+ + +D ++K + + DV Sbjct: 128 HIHKYVAMDIDHEVFVWEQPCPELAGLIEQG----HLHDDAVRKAAKEYLAPMLERDIDV 183 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLS 253 +VL CTH+P + V ++LS + ++D + + R + + H L+ + Sbjct: 184 VVLGCTHFPFVSPVLQELSGDRIRYIDPAYETSDLVRRTMDSNHLHNPSTEKGRSTLYFT 243 Query: 254 GKPDIAMRRLMQGF 267 + Q Sbjct: 244 KDIALGADLGAQFL 257 >gi|296454516|ref|YP_003661659.1| glutamate racemase [Bifidobacterium longum subsp. longum JDM301] gi|296183947|gb|ADH00829.1| glutamate racemase [Bifidobacterium longum subsp. longum JDM301] Length = 264 Score = 261 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 102/263 (38%), Gaps = 13/263 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GG+ V +++ MP H +Y D PYG ++ + + Sbjct: 4 SAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGVKTPEQVRALSFDIVERFV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--------GLIS 124 + VIACNTA + ++LR + + +G PA+K A + Sbjct: 64 -RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TP TLR + L+ + S I L VE G D + + + G F Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + + + D +VL CTH+ FR+L P +D ++ R +L + Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPED 238 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 + + RL + Sbjct: 239 ATGGVELANSDLSERVTRLSRDL 261 >gi|327399664|ref|YP_004340533.1| glutamate racemase [Hippea maritima DSM 10411] gi|327182293|gb|AEA34474.1| Glutamate racemase [Hippea maritima DSM 10411] Length = 254 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 102/256 (39%), Gaps = 23/256 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V++++ IY+ D PYG + K + + L ++ Sbjct: 7 IGVFDSGVGGLSVVKQLLKAF-NSDIIYLGDTARLPYGTKSKETVLKYSIQNA-EFLMRF 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ D L+ F F PA K AA + + + ++ T +T++ Sbjct: 65 NVDAIVVACNTASSVAIDVLKKKFNLPVFGVIEPAAKLAAKFEK---VCVIGTTSTIQSN 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 I Y C + + + VEE I + K+ + D + Sbjct: 122 AYPKKIAKYNKGCRVTQRACPLFVPLVEEGWIYDDITYEVAKRYLYDL-------ECDAL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA---RCLLPRINTHQTRVFDDHALFL 252 +L CTHYPL+ + +++ V +D+ +++ + + L + Sbjct: 175 ILGCTHYPLLREIIQRVMGVGVSLIDSGEALVKGLKDFKDLFEGSGRLN--------CYT 226 Query: 253 SGKPDIAMRRLMQGFG 268 + + + G Sbjct: 227 TDSEEKFAKLGSMFLG 242 >gi|312884421|ref|ZP_07744126.1| glutamate racemase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367943|gb|EFP95490.1| glutamate racemase [Vibrio caribbenthicus ATCC BAA-2122] Length = 274 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 84/259 (32%), Positives = 126/259 (48%), Gaps = 11/259 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q ILIFDSG+GGL V +++ +P ++ Y+ D+ +PYG E L R+ L + Sbjct: 15 QTKILIFDSGVGGLSVFKEIEAKLPALNYFYIFDNAAYPYGELEHETLTARVETLVCQYV 74 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K L VIACNTA T++ LR+ S+ +G VPAIK A+ + I +++TPAT+ Sbjct: 75 KKLDIDLVVIACNTASTIVLPMLRARL-SIPVVGVVPAIKPASNL-ANKAIGLIATPATI 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI+ + I ++ S L EE G I KE+E + Sbjct: 133 TRQYTRELINDFSQSKPIKMIGSTRLVDMAEEKLRGAAID----LKELEHILGPMKN-NI 187 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV VL CTH+PLI + + + V +D+ +IARR LL T ++ Sbjct: 188 DVAVLGCTHFPLIKNEIQSVLGSEVLLIDSGVAIARRVESLLT--PTAGAGEQGQREIYS 245 Query: 253 SGKP--DIAMRRLMQGFGL 269 + P + A+ + F Sbjct: 246 TAPPWKEKALNVALTSFKF 264 >gi|315925652|ref|ZP_07921862.1| glutamate racemase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621193|gb|EFV01164.1| glutamate racemase [Pseudoramibacter alactolyticus ATCC 23263] Length = 258 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 105/260 (40%), Gaps = 7/260 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K + I +FDSG+GG+ VL+ + +P +F++ D PYG ++ + Sbjct: 1 MRKAFNDYIGVFDSGVGGISVLKHLTEQLPNENFLFYGDSANAPYGEKSVEQVRALAFDI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +++ VIACNTA + ELR F + +G PA+K AA + + +++ Sbjct: 61 VRRMVE-DGVKAIVIACNTATSAAAKELRCAF-ELPIIGVEPALKPAATASGRHRVLVMA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP TL +L Y S LA R+E I+K I GC+ Sbjct: 119 TPVTLSLQKYRDLWDRYAGYAECVSCSCPGLAKRIERGRLDAPDLTALIEKLI-GCY--- 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 R D +VL CTHYP + R + V D A + +L + Sbjct: 175 -RGRVDSVVLGCTHYPFVSDQIRGVLGSHVTLYDGGAGTAGELKNVLTQKQLLTRAATPG 233 Query: 248 HALFLSGKPDIAMRRLMQGF 267 LF S + L + F Sbjct: 234 GVLFQSSLKQPSEITLYRHF 253 >gi|167752024|ref|ZP_02424151.1| hypothetical protein ALIPUT_00266 [Alistipes putredinis DSM 17216] gi|167660265|gb|EDS04395.1| hypothetical protein ALIPUT_00266 [Alistipes putredinis DSM 17216] Length = 255 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 15/268 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P + ++DSG+GGL V +++R +PE +Y+ D PYG + + Sbjct: 1 MDNRP--------VGVYDSGLGGLTVWREIRRQLPEESLVYLGDGKNCPYGARPADEICR 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 ++ + V+ACNTA D LR + M +G PA+K A T+SG+ Sbjct: 53 LADEAVGRLVGAG-CKMVVVACNTATAAAIDFLRRKYRQMPIVGMEPAVKPACLNTRSGV 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L+T +L Y + VEE + +++ +E Sbjct: 112 VGVLATARSLDGDLFRRTAARYGENIRVLTAVGEGFVELVEEDREQSPEAVETVRRVLE- 170 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQ 241 + D IVL CTHYP ++ VFRQ+ V +D S ++ RR LL + + Sbjct: 171 ---PMIREGADQIVLGCTHYPFLLPVFRQVIGERGVAVVDPSPAVGRRVGQLLDQYDLRA 227 Query: 242 TRVFDDHALFLSGKPDIAMRRLM-QGFG 268 + + FL+ + RL + FG Sbjct: 228 EKGATANYGFLTFADEAYRSRLECKAFG 255 >gi|168181031|ref|ZP_02615695.1| glutamate racemase [Clostridium botulinum NCTC 2916] gi|182668118|gb|EDT80097.1| glutamate racemase [Clostridium botulinum NCTC 2916] Length = 257 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 64 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL+ Y I + L +E+ + D I ++ F + + ++ Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDIIYNYLKDKFSKYDNEKI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 IVL CTHYP I ++++ +D S +R + L N + Sbjct: 179 SSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREE 229 >gi|322807887|emb|CBZ05462.1| glutamate racemase [Clostridium botulinum H04402 065] Length = 257 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 64 MSKGVKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL+ Y I + L +E+ + D I ++ F + + ++ Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 IVL CTHYP I ++++ +D S +R + L N + Sbjct: 179 SSIVLGCTHYPFIEETLKEITHNKACIIDGSFGTSRELKRQLKNSNMLREE 229 >gi|323525504|ref|YP_004227657.1| glutamate racemase [Burkholderia sp. CCGE1001] gi|323382506|gb|ADX54597.1| glutamate racemase [Burkholderia sp. CCGE1001] Length = 295 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 9/246 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + IFDSG+GGL VL+ +R P+ +YVAD + PYG +D + R + + ++ Sbjct: 20 RAPVGIFDSGLGGLSVLRAVRAQSPDEALLYVADSLYAPYGERDDDFIADRTLAIGEWLV 79 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA +R P + +G P +K AA ++++ + +L+T TL Sbjct: 80 KQGAKAL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALHSRTRVAGVLATQVTL 137 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ Y + C L VE + E++ + Sbjct: 138 RSARFQALLARYAADCRFICQPGHGLVQAVER----CDVGSAELRALLASYLQPMLEAGA 193 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDHA 249 D +VL CTHYP + R + + +D S +IAR+ +L + Q Sbjct: 194 DTLVLGCTHYPFLDAAIRDIVGDRMALVDTSVAIARQLERVLEQHGMRAALQAASAPLPR 253 Query: 250 LFLSGK 255 + + Sbjct: 254 FYSTDD 259 >gi|220920402|ref|YP_002495703.1| glutamate racemase [Methylobacterium nodulans ORS 2060] gi|219945008|gb|ACL55400.1| glutamate racemase [Methylobacterium nodulans ORS 2060] Length = 312 Score = 261 bits (668), Expect = 9e-68, Method: Composition-based stats. Identities = 106/260 (40%), Positives = 153/260 (58%), Gaps = 6/260 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 ++L+FDSG+GGL VL ++R P+ +Y ADD FPYG+ + AL R++ + ++ Sbjct: 42 PAVLVFDSGLGGLTVLAEVRRARPDARVVYAADDAAFPYGDLSEPALVARVVAVMERLIA 101 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + P L V+ACNTA TL+ LR+ F ++ F+G VPAIK AAA T+SGLIS+L+TP T+R Sbjct: 102 LHAPDLVVVACNTATTLVLPALRARF-AIPFVGTVPAIKPAAAATRSGLISVLATPGTVR 160 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R YT LI +Y + LV + LA+ E G + +D +++EI CF+ RTD Sbjct: 161 RDYTRELIDAYAGAYAVTLVGATRLAAFAEAELAGTPVGDDLLREEIAPCFVGAGESRTD 220 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHALF 251 V+VL CTHYPL++ F +L PWPV W+D + +IARR LL A+F Sbjct: 221 VVVLGCTHYPLLLRRFERLVPWPVTWIDPAPAIARRMAQLLGPAPHPAPPEDAAPVAAVF 280 Query: 252 LSGK---PDIAMRRLMQGFG 268 G+ P + +G G Sbjct: 281 TGGERITPSLRDALAARGMG 300 >gi|116490738|ref|YP_810282.1| glutamate racemase [Oenococcus oeni PSU-1] gi|290890158|ref|ZP_06553240.1| hypothetical protein AWRIB429_0630 [Oenococcus oeni AWRIB429] gi|122277078|sp|Q04G05|MURI_OENOB RecName: Full=Glutamate racemase gi|116091463|gb|ABJ56617.1| glutamate racemase [Oenococcus oeni PSU-1] gi|290480202|gb|EFD88844.1| hypothetical protein AWRIB429_0630 [Oenococcus oeni AWRIB429] Length = 281 Score = 261 bits (668), Expect = 9e-68, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 113/271 (41%), Gaps = 15/271 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN I DSG+GGL V+++ +P +V D+ PYG ++K Sbjct: 1 MDNR--------GIGYIDSGLGGLTVVREALKQLPNESVYFVGDEARMPYGPRPTVEIQK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA-AAYTQSG 121 + + ++ K+ V+ACNTA +LR+ + + +G + A A T++ Sbjct: 53 FTLQMADFLVKKHNIKALVVACNTATAQALPQLRA-YLEIPVIGVISAGALAGINATRNL 111 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++++ T +T+ + + + S I + VE G + + + I Sbjct: 112 HVNVIGTQSTVESKAYYDQLIALNSDLVIEQKALPEFVQLVESDMAGTPKGKQIVYQAIH 171 Query: 182 GCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT- 239 EK +GK++D +VL CTH+P++ + V +D + + ++ + N Sbjct: 172 NWMEEKNDGKKSDTLVLGCTHFPILKKEIQAAVDKNVAVVDPASEEILQTAEIMRKNNAF 231 Query: 240 HQTRVFDDHA---LFLSGKPDIAMRRLMQGF 267 H ++ + H + +G + + Sbjct: 232 HDSKNINHHEKDVFYTTGNIGRFSKFTREWL 262 >gi|90021260|ref|YP_527087.1| glutamate racemase [Saccharophagus degradans 2-40] gi|89950860|gb|ABD80875.1| glutamate racemase [Saccharophagus degradans 2-40] Length = 272 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 89/240 (37%), Positives = 134/240 (55%), Gaps = 2/240 (0%) Query: 3 IDNYPCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 + P + +L+FDSG GGL + K+ L + +Y AD+ FPYG AL+ Sbjct: 1 MTESPRQPDPNTPTVLVFDSGAGGLSICTKIMALRNDCAIVYAADNAYFPYGELSTSALR 60 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +R++ +++D+Y P ++VIACNTA T + +LR TF + F+G VPAIK AA TQ+G Sbjct: 61 QRVITFMGELIDQYSPSIAVIACNTASTALLADLRETF-DIPFVGVVPAIKPAATATQTG 119 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I+IL+T AT+ R YT +LI+ + + L S+ L S E+ + I+ + Sbjct: 120 TIAILATSATVTRDYTRDLINEFAPNKTVILHSAQPLVSAAEQLIQNNQCPNSAIQGALS 179 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 F + + D IVLACTH+PL+ + L P + LD+ D+IARR LL NT + Sbjct: 180 ELFAKPGAEHIDTIVLACTHFPLLREAIQALLPASITLLDSGDAIARRVDSLLCATNTLK 239 >gi|325955658|ref|YP_004239318.1| glutamate racemase [Weeksella virosa DSM 16922] gi|323438276|gb|ADX68740.1| Glutamate racemase [Weeksella virosa DSM 16922] Length = 269 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 14/269 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M DN P I +FDSG+GGL ++++ L+P+ +Y D PYG A+ Sbjct: 1 MIYDNRP--------IGVFDSGVGGLNFAKEIKRLLPKESIVYFGDTKHLPYGEKSAEAI 52 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQ 119 KK + ++ + + V ACNTA + ++ + + + + + AY Sbjct: 53 KKYSKEITQFLISQNCKAILV-ACNTATANAIEIIKEVAGEEILVVDVINPVAEKVAYEL 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 I +++T AT+ I + + V++ +L +EE + + Sbjct: 112 RTKIGVIATKATVNSCAYKKTIRKFNKHIKVVEVATPLLVPIIEEGLYNTNVS----RAV 167 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 +E K+ + D I+L CTHYPLI Q+ V +++ + L + Sbjct: 168 LEVYLSNKKLEGIDSIILGCTHYPLIQKEIEQIFEGKVQVINSPLIVVNCLIYQLHQRQQ 227 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 + +LS D + + FG Sbjct: 228 LANNNNPYYLFYLSDYTDNFHKISKRFFG 256 >gi|291516158|emb|CBK69774.1| glutamate racemase [Bifidobacterium longum subsp. longum F8] Length = 264 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 102/263 (38%), Gaps = 13/263 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GG+ V +++ MP H +Y D PYG ++ + + Sbjct: 4 SAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSASAPYGIKTPEQVRALSFDIVERFV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--------GLIS 124 + VIACNTA + ++LR + + +G PA+K A + Sbjct: 64 -RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TP TLR + L+ + S I L VE G D + + + G F Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + + + D +VL CTH+ FR+L P +D ++ R +L + Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPED 238 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 + P + L + Sbjct: 239 ATGGVELANSDPSERIAELSRKL 261 >gi|170758321|ref|YP_001788902.1| glutamate racemase [Clostridium botulinum A3 str. Loch Maree] gi|229486237|sp|B1KTG4|MURI_CLOBM RecName: Full=Glutamate racemase gi|169405310|gb|ACA53721.1| glutamate racemase [Clostridium botulinum A3 str. Loch Maree] Length = 257 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKT-LTFNATDFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 64 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL+ Y I + L +E+ + D I ++ F + + ++ Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 IVL CTHYP I ++++ +D S +R + L N + Sbjct: 179 SSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREE 229 >gi|284049086|ref|YP_003399425.1| glutamate racemase [Acidaminococcus fermentans DSM 20731] gi|283953307|gb|ADB48110.1| glutamate racemase [Acidaminococcus fermentans DSM 20731] Length = 279 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 97/255 (38%), Gaps = 6/255 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + + I + DSG+GGL VL+ ++ +P FI++ D PYGN + + + +D Sbjct: 3 QAKQPIGVIDSGVGGLTVLKWLQAKLPHEDFIFIGDTARTPYGNRSREEITRFVAE-MTD 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 LDK V+ACNT L D ++ P +G + T++ + +T Sbjct: 62 WLDKRHIKQLVVACNTITVLGLDVIKGNHP-FDVIGMAKGSRMVPGVTKNNRVGFFATDF 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ I + + +E G K E+K I + Sbjct: 121 TVSTGAHKREIQRICPEIQVFGQGCPKFVPLIE----GEKFGSPELKAAIHEYADKLREH 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D ++L+CTHYP + + V LD ++ + A L + +T + Sbjct: 177 NVDTVLLSCTHYPFVRKEIEEEFGPEVTILDPAERTTQDALENLEKRGLARTTGLGRAEI 236 Query: 251 FLSGKPDIAMRRLMQ 265 + + R + Sbjct: 237 CFTADLERGRRLAAR 251 >gi|332159762|ref|YP_004296339.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603894|emb|CBY25392.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica Y11] gi|325663992|gb|ADZ40636.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 240 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 73/237 (30%), Positives = 123/237 (51%), Gaps = 4/237 (1%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 MP+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L Sbjct: 1 MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 60 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S Sbjct: 61 RERF-TFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTQDLIERFATDCKIELLGS 119 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 L E G + ++ +KK + +E D IVL CTH+PL+ Q+ P Sbjct: 120 SELVELAETKLHGGVVPKEALKKILHPWLAMREP--PDTIVLGCTHFPLLTEELAQVLPE 177 Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271 +D+ +IARR L+ + ++ A ++ D A+ ++QG+G S Sbjct: 178 GTRMVDSGAAIARRTAWLISSQENMISSDEENIAYCMALNADTDALLPVLQGYGFPS 234 >gi|94268729|ref|ZP_01291267.1| Glutamate racemase [delta proteobacterium MLMS-1] gi|93451485|gb|EAT02316.1| Glutamate racemase [delta proteobacterium MLMS-1] Length = 264 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 9/257 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG+ V + + +P++ IY D PYG+ + D L + Sbjct: 2 IGIFDSGVGGMTVARAIEQALPDHRLIYFGDLARTPYGSKSAETITAYSRQNV-DFLRQQ 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACN+A ++ LR+++ F PA+++A Y+ G + ++ T AT+R Sbjct: 61 GAKLLVVACNSAASVATAALRASYELPLFEVISPAVREAVHYSSGGRVGVIGTRATIRSG 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ C + + +L VEE + + E K + + + D + Sbjct: 121 VYEELLQRQRPACRVFAAACPLLVPLVEEGW----LDKRETKMILRRYLAPLKRHQVDTL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFDDHALF 251 VL CTHYPL+ + ++ V +D+S ++A + L + Q R ++ + Sbjct: 177 VLGCTHYPLLKEMIQRRIGRRVRVIDSSAALAGELQRFLAAHPEIEQSLQRRREGENLYY 236 Query: 252 LSGKPDIAMRRLMQGFG 268 +S + A + FG Sbjct: 237 VSDVTEAATATAHRIFG 253 >gi|332877978|ref|ZP_08445709.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684082|gb|EGJ56948.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 272 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 109/257 (42%), Gaps = 9/257 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 L I +FDSG+GG + +++ LMP + +++AD+ PYG + + Sbjct: 7 LTAPIGLFDSGVGGTTIWKEINALMPNENTLFLADNKNAPYGEKTKEEIIALCDANTQFL 66 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + + V+ACNT T LR + + F+G PAIK A + + I +L+T T Sbjct: 67 L-NHNAKIIVVACNTGTTNAIAYLRDKYKQVPFIGIEPAIKPAGLQSITKKIGVLATRRT 125 Query: 132 LRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 L + + I L +E +++ ++ ++ Sbjct: 126 LTSDLFAKTSEHLKQEEKIEIIEQVGEGLVDLIEAG----QMESAKMTALLQKYLQPMVA 181 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DD 247 + D +VL CTHYP ++ ++ P + +D+ ++AR+ R +L + + + Sbjct: 182 EGIDYLVLGCTHYPYLLPQIQRFIPVSIKVIDSGYAVARQTRNILAQYHLLNEKQDYVAT 241 Query: 248 HALFLSGKPDIAMRRLM 264 H +G +I + Sbjct: 242 HKWVTNGNLEILKQFAA 258 >gi|83647752|ref|YP_436187.1| glutamate racemase [Hahella chejuensis KCTC 2396] gi|83635795|gb|ABC31762.1| glutamate racemase [Hahella chejuensis KCTC 2396] Length = 271 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 84/270 (31%), Positives = 128/270 (47%), Gaps = 7/270 (2%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + N K LI DSG GGL + +R P +Y+AD +PYG+ + ++ Sbjct: 2 MANAHETKGPVAPALIIDSGSGGLSIWGHIRRHTPWLPTLYLADFGFYPYGDKSEQEIET 61 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R+ + + + Y L V+ACNTA T++ D LR+ F +G VPAIK AA +T+ + Sbjct: 62 RVRHIVEQVCECYPAQLIVVACNTASTVVLDHLRARFQQ-PVVGVVPAIKTAATHTKKQV 120 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+T T+RR YT LI + C + V + L E++ G ++ I+ Sbjct: 121 IGLLATQGTVRRAYTDELIRDFARHCQVIKVGAPDLVQWGEDWVRGRSPDMARLRGVIQP 180 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTH+PL+ QL+P ++W+D+ ++IARR LL + Sbjct: 181 FL----EAEADQVVLGCTHFPLLKPFLYQLAP-DINWVDSGEAIARRVAYLLQAQQSEGG 235 Query: 243 RVFDDHALFLSGKP-DIAMRRLMQGFGLKS 271 H F SG D R G S Sbjct: 236 EESTSHRAFYSGDKQDSEWERGAMALGFSS 265 >gi|94265271|ref|ZP_01289030.1| Glutamate racemase [delta proteobacterium MLMS-1] gi|93454252|gb|EAT04568.1| Glutamate racemase [delta proteobacterium MLMS-1] Length = 264 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 9/257 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG+ V + + +P++ IY D PYG+ + +L + Sbjct: 2 IGIFDSGVGGMTVARAIEQALPDHRLIYFGDLARTPYGSKSAETITAYSRQNVDFLL-QQ 60 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACN+A ++ LR+++ F PA+++A + G + ++ T AT+R Sbjct: 61 GAKLLVVACNSAASVATAALRASYELPLFEVISPAVREAVHCSSGGRVGVIGTRATIRSG 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ C + + +L VEE + + E K + + + D + Sbjct: 121 VYEELLQRQRPACRVFAAACPLLVPLVEEGW----LDKRETKMILRRYLAPLKRHQVDTL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFDDHALF 251 VL CTHYPL+ + ++ V +D+S ++A + L + Q R ++ + Sbjct: 177 VLGCTHYPLLKEMIQRRIGRRVRVIDSSAALAGELQRFLAAHPEIEQSLQRRREGENLYY 236 Query: 252 LSGKPDIAMRRLMQGFG 268 +S + A + FG Sbjct: 237 VSDVTEAATATAHRIFG 253 >gi|148381502|ref|YP_001256043.1| glutamate racemase [Clostridium botulinum A str. ATCC 3502] gi|153933747|ref|YP_001385877.1| glutamate racemase [Clostridium botulinum A str. ATCC 19397] gi|153937684|ref|YP_001389284.1| glutamate racemase [Clostridium botulinum A str. Hall] gi|166231033|sp|A7FZC4|MURI_CLOB1 RecName: Full=Glutamate racemase gi|166231034|sp|A5I7T7|MURI_CLOBH RecName: Full=Glutamate racemase gi|148290986|emb|CAL85122.1| glutamate racemase [Clostridium botulinum A str. ATCC 3502] gi|152929791|gb|ABS35291.1| glutamate racemase [Clostridium botulinum A str. ATCC 19397] gi|152933598|gb|ABS39097.1| glutamate racemase [Clostridium botulinum A str. Hall] Length = 257 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 8/240 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 64 MSKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL+ Y I + L +E+ + D I ++ F + + ++ Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDDHAL 250 IVL CTHYP I ++++ +D S +R + L N T + RV Sbjct: 179 SSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLTEENRVGKVTIF 238 >gi|110639009|ref|YP_679218.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406] gi|110281690|gb|ABG59876.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406] Length = 269 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 105/248 (42%), Gaps = 7/248 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 Q I IFDSGIGGL V + L+P IY D FPYG+ A++ + + Sbjct: 1 MTDAQRPIGIFDSGIGGLTVAYAVNQLLPNESIIYFGDTAHFPYGDKSTAAIQSYAVKIT 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAV-PAIKQAAAYTQSGLISIL 126 +L ++ V+ IACN+A + ++ S A + + P ++ A G + ++ Sbjct: 61 DMLLQQHCKVIL-IACNSASSAAYQLVKEYAGSRAKVINVIDPIVRYVGAKYPKGKVGLI 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ I + + +++ +LA +EE I E I + Sbjct: 120 GTKKTVSSNVYQRKIDKLNKEITLKALATPLLAPMIEEGYFNNAISE----SIILNYLQD 175 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 K + ++L CTHYPLI L VD +D+SD +A + L N T Sbjct: 176 KSLDGIESLILGCTHYPLIKEQINNLYKGSVDVIDSSDIVAAAVKDYLADTNLLNTDADV 235 Query: 247 DHALFLSG 254 H ++S Sbjct: 236 QHKFYVSD 243 >gi|134094154|ref|YP_001099229.1| glutamate racemase [Herminiimonas arsenicoxydans] gi|133738057|emb|CAL61102.1| Glutamate racemase [Herminiimonas arsenicoxydans] Length = 284 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 12/274 (4%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M P + I IFDSG+G L VL+ ++ +P H + AD PYG D + Sbjct: 1 MSFSATPDPVAAEAPIGIFDSGVGALSVLRHIQARLPSEHLLCFADSGYAPYGGKPDAEI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + +L K V+ACNTA D LR +P + +G P +K AA +++S Sbjct: 61 VERTLAIAAFLLTKK-VKAIVVACNTATAAAIDALRQQYPDLIVVGVEPGLKPAAVFSKS 119 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIH--LVSSMILASRVEEYACGIKIKEDEIKK 178 G +L+T +TL L + + + L ++E+ ++ E Sbjct: 120 GKAGVLATASTLASHRFIALRDQIAETTGVTFLTQACVGLVEQIEKG----ELSSPETAA 175 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW----PVDWLDNSDSIARRARCLL 234 +E D + L CTHYP + + ++ PV +D ++++R+ LL Sbjct: 176 MLERYVTPLLRGGADTLALGCTHYPFVQPLIEAIAERESAVPVTIIDTGEAVSRQLERLL 235 Query: 235 PRINTHQ-TRVFDDHALFLSGKPDIAMRRLMQGF 267 + + + F +G + Sbjct: 236 QQRGLQRFENMPGSLQAFTTGSQSALEHAFAKLL 269 >gi|167772360|ref|ZP_02444413.1| hypothetical protein ANACOL_03737 [Anaerotruncus colihominis DSM 17241] gi|167665463|gb|EDS09593.1| hypothetical protein ANACOL_03737 [Anaerotruncus colihominis DSM 17241] Length = 269 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 4/249 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I +FDSG+GGL ++++R L+PE H IY D PYG+ ++K + L Sbjct: 3 QRAIGVFDSGLGGLTTVRELRRLLPEEHIIYFGDTGRVPYGSRGREIIRKYAVQDI-RFL 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + + AC T ++I E+ + +PA + A A + +G I ++ T ATL Sbjct: 62 RRFDVKIIIAACGTVSSVITPEIVESAGVPFSGVVLPAAQAACAASTNGRIGVIGTAATL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R I H + + VE I+ + K + Sbjct: 122 RSGAYGRAIRGIRPDAHTFGNACPLFVPLVENGF--IQPDNEITIKVAQTYLQPMIENEV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPLI V +L V +D+ +AR A+ LL R + ++ Sbjct: 180 DTLILGCTHYPLIRPVIDRLLRSRVTLIDSGAQVARWAQTLLTREDML-GAGNGGAEYYV 238 Query: 253 SGKPDIAMR 261 S P++ + Sbjct: 239 SDSPEMFIE 247 >gi|254478075|ref|ZP_05091458.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653] gi|214035937|gb|EEB76628.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653] Length = 278 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 8/254 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E I + DSG+GG+ VL+++ ++PE +IY D + PYGN ++K + Sbjct: 11 VEMDKNGPIGVIDSGVGGITVLKRLLEILPEEDYIYFGDTLRVPYGNRPKEEIEKFTREI 70 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L K + VIACNT + I ++ + + F IK A T +G I +++ Sbjct: 71 VNY-LKKQKVKAVVIACNTICSSIN---KNDYEILMFGILEAGIKSAVEATSNGRIGVIA 126 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ I + + L VE + I ++ C E Sbjct: 127 TKRTVESEAYLKGIKRLNRNAMVFQKACPELVLIVENGF----YEASSIYTAVKKCTEEF 182 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 K D +VL CTH+P+++ ++ V +D + +A + L N + + Sbjct: 183 LEKDIDTLVLGCTHFPILLPFIERVVDNKVTVVDPAIKLAHEVKKYLVENNLVKDKKGGQ 242 Query: 248 HALFLSGKPDIAMR 261 ++G+ + ++ Sbjct: 243 IRFLVTGEKENFIK 256 >gi|83312625|ref|YP_422889.1| glutamate racemase [Magnetospirillum magneticum AMB-1] gi|82947466|dbj|BAE52330.1| Glutamate racemase [Magnetospirillum magneticum AMB-1] Length = 284 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 61/254 (24%), Positives = 102/254 (40%), Gaps = 5/254 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + IFDSG+GGL V +R MP+ +Y+ D PYG + + + +++K Sbjct: 21 PVGIFDSGVGGLTVAAAIRRAMPDERLLYLGDVARQPYGTKSPRTVTRYAVQAAEFLVEK 80 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPATLR 133 V+ACNTA + + + FP + LG V A AA + G I + +T T R Sbjct: 81 G-IKALVVACNTASAVALEAIAERFPGLPVLGVVEAGADGAARASARGRIVVAATEGTCR 139 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + V + + EE I + + + G + D Sbjct: 140 SEAYERAIARRRDGALVRCVPCPLFVALAEEGLTDGPIVDSVARHYL-GSLFDGTEPG-D 197 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTH+PL+ +L+ V +D +++ + LL + H L + Sbjct: 198 CLVLGCTHFPLLAPALSRLAGPEVTLVDCAEATSSMLVRLLEGREAPKGSGGGLH-LIST 256 Query: 254 GKPDIAMRRLMQGF 267 P+ R + F Sbjct: 257 DAPERFARMAGKLF 270 >gi|118586558|ref|ZP_01544000.1| glutamate racemase [Oenococcus oeni ATCC BAA-1163] gi|118432999|gb|EAV39723.1| glutamate racemase [Oenococcus oeni ATCC BAA-1163] Length = 281 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 15/271 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN I DSG+GGL V+++ +P +V D+ PYG ++K Sbjct: 1 MDNR--------GIGYIDSGLGGLTVVREALKQLPNESVYFVGDEARMPYGPRPTVEIQK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA-AAYTQSG 121 + + ++ K+ V+ACNTA +L++ + + +G + A A + T++ Sbjct: 53 FTLQMADFLVKKHNIKALVVACNTATAQALPQLKA-YLEIPVIGVISAGALAGISATRNL 111 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++++ T +T+ + + + S I + VE G + + + I Sbjct: 112 HVNVIGTQSTVESKAYYDQLIALNSDLVIEQKALPEFVQLVESDIAGTSQGKQIVYQAIH 171 Query: 182 GCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT- 239 EK +GK++D +VL CTH+P++ + V +D + + +L + N Sbjct: 172 NWMEEKNDGKKSDTLVLGCTHFPILKKEIQAAVDKNVAVVDPASEEILQTAEILRKNNAF 231 Query: 240 HQTRVFDDHA---LFLSGKPDIAMRRLMQGF 267 H ++ + H + +G + + Sbjct: 232 HDSKNINHHEKDVFYTTGNIGRFSKFTREWL 262 >gi|226951018|ref|YP_002806109.1| glutamate racemase [Clostridium botulinum A2 str. Kyoto] gi|254766112|sp|C1FNG8|MURI_CLOBJ RecName: Full=Glutamate racemase gi|226841163|gb|ACO83829.1| glutamate racemase [Clostridium botulinum A2 str. Kyoto] Length = 257 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 6/231 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K +D L Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALTSN-ATDFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 64 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL+ Y I + L +E+ + D I ++ F + + ++ Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDIIYNYLKDKFSKYDNEKI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 IVL CTHYP I ++++ +D S +R + L N + Sbjct: 179 SSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREE 229 >gi|313893755|ref|ZP_07827321.1| glutamate racemase [Veillonella sp. oral taxon 158 str. F0412] gi|313441319|gb|EFR59745.1| glutamate racemase [Veillonella sp. oral taxon 158 str. F0412] Length = 267 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 7/247 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-FLACRIAEAL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K L VIACNT + DE+R S+ +G +K A + ++S I I++T AT+ Sbjct: 65 EKQPVKLMVIACNTFTVVALDEVRERV-SVPVIGVSQGVKTAISESKSNTIGIMATVATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ + + LA +E+ ++ E + Sbjct: 124 NSHIHKHVALEVDPEVLVWEQPCPELAGLIEQGHLDDFF----VRDVCEEYVEPLLSREI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251 DV+VL CTH+P + + +L+ + ++D + + +L N + + L+ Sbjct: 180 DVVVLGCTHFPFVKPLLEELTAGRIQFVDPAYETSNLVCRILEHKNLYNPQENLGTVKLY 239 Query: 252 LSGKPDI 258 + ++ Sbjct: 240 FTKDIEL 246 >gi|217976585|ref|YP_002360732.1| glutamate racemase [Methylocella silvestris BL2] gi|217501961|gb|ACK49370.1| glutamate racemase [Methylocella silvestris BL2] Length = 279 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 109/266 (40%), Positives = 157/266 (59%), Gaps = 8/266 (3%) Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + IL+FDSG+GGL V ++ L P+ F+Y AD+ GFPYG AL R++ + Sbjct: 1 MSRPPKILVFDSGLGGLTVFAEIAALRPDAQFVYAADEAGFPYGALPATALAPRVLAVMG 60 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++D + P ++VIACNTA TL+ LR+ FP + F+G VPAIK AA +QS +IS+L+TP Sbjct: 61 RLIDLFSPDVAVIACNTASTLVLPHLRAAFPDLPFVGTVPAIKPAAQTSQSKMISVLATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ R YT LI +Y + C + LV S LAS E++ G + I EI F+E EG Sbjct: 121 GTVARDYTRGLIEAYAADCKVMLVGSSRLASLAEDFMQGDAPSDAAILDEIAPAFVEAEG 180 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-----NTHQTRV 244 +RTD I LACTHYPL++ F +L+PWPV W+D + +IARR +L +T Sbjct: 181 RRTDAIALACTHYPLLIAQFERLAPWPVAWIDPAPAIARRTDHVLTAELGFAAGGGETAR 240 Query: 245 FDDHALFL-SGKPDIAMRRLMQGFGL 269 A+F S + +R ++ G+ Sbjct: 241 KPALAVFTGSKEAGPKLREALRLRGI 266 >gi|313680798|ref|YP_004058537.1| glutamate racemase [Oceanithermus profundus DSM 14977] gi|313153513|gb|ADR37364.1| glutamate racemase [Oceanithermus profundus DSM 14977] Length = 260 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 113/264 (42%), Gaps = 19/264 (7%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 L+ I +FDSG+GGL VL+ +R +P F+Y D PYG+ +++ + Sbjct: 5 AHAPLEQPIGVFDSGVGGLTVLEALRRALPGRDFLYFGDTARVPYGSKPPELVRRFAWEI 64 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +L + L V+ACNTA ++ +L + G + A + G + ++ Sbjct: 65 SGFLLRQGAVAL-VVACNTASSVALADLARL--GVPVTGVIDPA--VAEAERYGHVGVIG 119 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ + + + +++ + VEE + D + + + ++E Sbjct: 120 TRATVASGAYQSRLE--ARGKRVWSLATPLFVPIVEEG-----LWSDGVAELVARHYLEG 172 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + ++L CTHYP + + +L P + +D+++ AR LP Sbjct: 173 APDDLEALILGCTHYPYLKPLLERLRP-GLTLIDSAEPTARAVARSLP-----AGPGSGR 226 Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271 +++G P+ A R L G+ + Sbjct: 227 VVHYVTGDPE-AYRALAARLGVPA 249 >gi|327403118|ref|YP_004343956.1| glutamate racemase [Fluviicola taffensis DSM 16823] gi|327318626|gb|AEA43118.1| glutamate racemase [Fluviicola taffensis DSM 16823] Length = 275 Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 11/259 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL VL+++R +PEY F+Y+ D+ PYG+ + + D Sbjct: 5 GPIGVFDSGYGGLTVLKEIREKLPEYDFLYLGDNARAPYGSRSFPVIYDYTWQAVQALFD 64 Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + L ++ACNTA +L P LG + P+ ++ ++++ + +L+ Sbjct: 65 R-DCSLVILACNTASAKALRNIQRIKLPELHPDKRVLGVIRPSTEELDKHSKTKHVGVLA 123 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+R + + ++ + + +E I++++ + Sbjct: 124 TDGTIRSNSYQIELAKFAPDLVVNQHACPMWVPLIENNKFDSPGGIYFIQEDLVQLL--E 181 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245 + + D I+LACTHYP+++ + L P ++ L +A L R + Sbjct: 182 KDPKIDTILLACTHYPILLDQIKGLLPEQIEVLPQGQIVANSLADYLDRHPEMAAKCSKG 241 Query: 246 DDHALFLSGKPDIAMRRLM 264 + + Sbjct: 242 GKVNYLTTESAADFSEKAS 260 >gi|291288784|ref|YP_003505600.1| glutamate racemase [Denitrovibrio acetiphilus DSM 12809] gi|290885944|gb|ADD69644.1| glutamate racemase [Denitrovibrio acetiphilus DSM 12809] Length = 256 Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 10/246 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I IFDSG+GGL V + + PE Y+ D PYG+ + + ++D Sbjct: 2 AIGIFDSGVGGLTVYKTISEHFPELDMHYLGDTARVPYGSRSQETVINYSLQCAGFLVDN 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + ++ACNTA + D +R F P A T++ I ++ T AT+R Sbjct: 62 FDIDTIIVACNTASSYAIDHIRKKFKVNVIGVVEPGSYSALQVTENNKIGVIGTRATVRS 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + S I + + VEE I + ++ ++ D Sbjct: 122 GSYVKALKAIRSDVEITQTACPLFVPIVEEMLVDTDIADMVVRHYLDN----MMTTGADT 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYPL+ +V + P + +D+S++I L +N H R ++L+ Sbjct: 178 LILGCTHYPLLKNVIAKFYP-DIKIVDSSEAIIDCINELKLNVNQHSKR-----EIYLTD 231 Query: 255 KPDIAM 260 + Sbjct: 232 ESPAFE 237 >gi|238028090|ref|YP_002912321.1| glutamate racemase [Burkholderia glumae BGR1] gi|237877284|gb|ACR29617.1| Glutamate racemase [Burkholderia glumae BGR1] Length = 286 Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 8/258 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL VL+ R +P+ F+YVAD PYG +D + +R + + + + Sbjct: 16 VGIFDSGLGGLSVLRAARAHLPDEAFVYVADSRYAPYGERDDAFIIERTLAIGEWLAARG 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA +R T ++ +G P IK AA + S + +L+T ATLR Sbjct: 76 AKAL-VVACNTATAQSIAVVRETL-AIPLIGVEPGIKPAALASTSRVAGVLATAATLRSA 133 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI + C L L +E G ++ + G D + Sbjct: 134 RFEALIARHAGDCRFLLQPGHGLVQAIERGDTG----SAGLRTLLAGYLEPMLAAGADTL 189 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALFLS 253 VL CTHYP + R+L+ + +D ++IAR+ +L L+ + Sbjct: 190 VLGCTHYPFLDATIRELTQNRLTLVDTGEAIARQLARVLDEHGLRSPAGAEPPPTRLYST 249 Query: 254 GKPDIAMRRLMQGFGLKS 271 GL + Sbjct: 250 DDGTRLQALAATLLGLDA 267 >gi|312132407|ref|YP_003999746.1| muri [Bifidobacterium longum subsp. longum BBMN68] gi|311772761|gb|ADQ02249.1| MurI [Bifidobacterium longum subsp. longum BBMN68] Length = 264 Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 13/263 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GG+ V +++ MP H +Y D PYG ++ + + Sbjct: 4 SAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVERFV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--------GLIS 124 + IACNTA + ++LR + + +G PA+K A + Sbjct: 64 -RQGVKAVAIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TP TLR + L+ + S I L VE G D + + + G F Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + + + D +VL CTH+ FR+L P +D ++ R +L + Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPED 238 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 + P + L + Sbjct: 239 ATGGVELANSDPSERIAELSRKL 261 >gi|332638684|ref|ZP_08417547.1| glutamate racemase [Weissella cibaria KACC 11862] Length = 281 Score = 259 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 101/270 (37%), Gaps = 19/270 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN +I DSGIGGL V+++ +P+ YV D PYG + Sbjct: 1 MDNR--------AIGYIDSGIGGLTVVKQALKQIPDEQVYYVGDTARMPYGPRPQEEVLG 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + +L K + V+ACNTA +L++ + +G + P + A + G Sbjct: 53 FTWQMVRYLLKK-DIKMLVVACNTATAAALPDLQAKL-DIPVVGVIQPGVDAALRKSADG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T T++ N + ++ +++ E + ++ ++ Sbjct: 111 EIGVIATAGTVKSLAYYNGLLQGNRAANVVQLAAPEFVDVAE----NHDYTSEFARQVVK 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH- 240 + + D ++L CTH+PL+ + ++ V +++ L + + Sbjct: 167 EKLSYFKNHQVDTLILGCTHFPLMENFIQEAMGPQVTLVNSGAETISTVVEFLDKFDLRR 226 Query: 241 ---QTRVFDDHALFLSGKPDIAMRRLMQGF 267 +D F +G + Sbjct: 227 ASANPADHNDDEYFTTGSVKRFATIGGRWL 256 >gi|187777456|ref|ZP_02993929.1| hypothetical protein CLOSPO_01023 [Clostridium sporogenes ATCC 15579] gi|187774384|gb|EDU38186.1| hypothetical protein CLOSPO_01023 [Clostridium sporogenes ATCC 15579] Length = 260 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 6/246 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L Sbjct: 8 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 67 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL+ Y I + L +E+ + D I ++ F + + ++ Sbjct: 126 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 IVL CTHYP + ++++ +D S ++ + L N + Sbjct: 182 SSIVLGCTHYPFVEETLKEVTHNKACIIDGSLGTSKELKRQLEDRNMLRKESRIGKVTIF 241 Query: 253 SGKPDI 258 + K D Sbjct: 242 NSKEDK 247 >gi|222151562|ref|YP_002560718.1| hypothetical protein MCCL_1315 [Macrococcus caseolyticus JCSC5402] gi|222120687|dbj|BAH18022.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 247 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 7/237 (2%) Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92 +P Y+ D+ PYG +++ + L +++K+ + VIACNTA Sbjct: 1 MRQLPNETIYYLGDEARCPYGPRTQEEVRRFTIQLAEFLINKH-IKMLVIACNTATAAAL 59 Query: 93 DELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151 + LR TF ++ +G + P + A T++ + +L T T+R IH + Sbjct: 60 ESLRETF-NIPIIGVIEPGARTAIMTTENNHVLVLGTEGTIRSHAYKEKIHMINPHIEVA 118 Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 S VE E E + I E + ++D ++L CTHYPL+ + Sbjct: 119 GKSCPEFVPLVESRRY---KDEAESMRIISRVLQEFKTHKSDTVILGCTHYPLLQEYINR 175 Query: 212 LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLMQGF 267 + + AR LL N H T+ H F++G + + Sbjct: 176 FFDNQKKVISSGLETAREVSALLTFRNIHVTQPATVAHRFFVNGDAEHFTEIAKEWL 232 >gi|307545641|ref|YP_003898120.1| glutamate racemase [Halomonas elongata DSM 2581] gi|307217665|emb|CBV42935.1| glutamate racemase [Halomonas elongata DSM 2581] Length = 258 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 83/258 (32%), Positives = 131/258 (50%), Gaps = 9/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL+FDSG+GGL V+ +R +PE Y D+ PYG ED L R++ + Sbjct: 1 MAGPILVFDSGVGGLSVVASLRRRLPEAALAYACDNAMLPYGMREDDWLVGRILEVCESA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + V+ACNTA TL + LR ++ +G VPAIK AA +++ I +L+T AT Sbjct: 61 VAASGCAGLVVACNTASTLALEALRERL-TVPVVGTVPAIKPAAGMSETRHIGLLATSAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI + C + +++ L + E + G + D +++ + + Sbjct: 120 VGRAYTLRLIREFAGDCRVTRIAADPLVTEAERWVAGERPDLDVLRRTLSP---MAQMPD 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PL+ + +P PV W+D+ D+IARRA ++ HQ R + Sbjct: 177 LDTMVLGCTHFPLLRDWLIEFAPRPVRWVDSGDAIARRAGQVMA---DHQRRRGSETGWV 233 Query: 252 LSGKPDIAMRRLMQGFGL 269 P A+ R + GFG Sbjct: 234 T--APSEALSRGLSGFGF 249 >gi|168183642|ref|ZP_02618306.1| glutamate racemase [Clostridium botulinum Bf] gi|237797023|ref|YP_002864575.1| glutamate racemase [Clostridium botulinum Ba4 str. 657] gi|259509811|sp|C3KWB8|MURI_CLOB6 RecName: Full=Glutamate racemase gi|182673216|gb|EDT85177.1| glutamate racemase [Clostridium botulinum Bf] gi|229262938|gb|ACQ53971.1| glutamate racemase [Clostridium botulinum Ba4 str. 657] Length = 257 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 6/231 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNTPYGTKKVEEVKA-LTFNATDFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 64 MSKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL+ Y I + L +E+ + D I ++ F + + ++ Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDDEKI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 IVL CTHYP + ++++ +D S +R + L N + Sbjct: 179 SSIVLGCTHYPFVEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREE 229 >gi|170755805|ref|YP_001783201.1| glutamate racemase [Clostridium botulinum B1 str. Okra] gi|229486236|sp|B1IH18|MURI_CLOBK RecName: Full=Glutamate racemase gi|169121017|gb|ACA44853.1| glutamate racemase [Clostridium botulinum B1 str. Okra] Length = 257 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL Sbjct: 64 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +NL+ Y I + L +E+ + D I ++ F + + ++ Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 IVL CTHYP I ++++ +D S +R + L N + Sbjct: 179 SSIVLGCTHYPFIEKTLKEVTYNKACIIDGSFGTSRELKRQLKNSNMLREE 229 >gi|304312822|ref|YP_003812420.1| Glutamate racemase [gamma proteobacterium HdN1] gi|301798555|emb|CBL46785.1| Glutamate racemase [gamma proteobacterium HdN1] Length = 276 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 8/259 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 S+++FDSGIGGL V +++R MP YVAD+ FPYG ++ L +R+ L Sbjct: 3 ALTAPPASVILFDSGIGGLSVAREIRAAMPGLDINYVADNRIFPYGLQKESVLIERVCAL 62 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + +Y P VIACN+A T++ D LR+ + +G VPAIK AAA +Q +I +L+ Sbjct: 63 MPILEARYSPGAIVIACNSASTVVLDALRTQ-TQVPVIGVVPAIKPAAAQSQRRVIGLLA 121 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP T++R+YT LI + + C + LV S L S E GI I E+ + + Sbjct: 122 TPGTIQRSYTRRLIDQFANDCTVLLVGSSALVSLAENKLRGIPIDLQEVSNIVAPFCHAE 181 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245 D++VL CTH+P + Q+ P +D+ ++IARR R +L Sbjct: 182 TP--PDIVVLGCTHFPFLREELMQVLPENTRLIDSGEAIARRTRHILEAQGLEAQGAAFL 239 Query: 246 ---DDHALFLSGKPDIAMR 261 F + + D A Sbjct: 240 ERVPTLHFFFTEETDSAHE 258 >gi|20806735|ref|NP_621906.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4] gi|24418566|sp|Q8RD38|MURI1_THETN RecName: Full=Glutamate racemase 1 gi|20515192|gb|AAM23510.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4] Length = 266 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 8/251 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 I I DSG+GG+ VL+++ ++PE +IY D + PYGN ++K + + Sbjct: 2 DKNGPIGIIDSGVGGITVLKRLLEILPEEDYIYFGDTLRVPYGNRPKEEIEKFTREIVNY 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L K + VIACNT + I ++ + + F IK A T +G I +++T Sbjct: 62 -LKKQKVKAVVIACNTICSSIN---KNDYEILMFGILEAGIKSAVEATSNGRIGVIATKR 117 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ I + + L VE + I ++ C E K Sbjct: 118 TVESEAYLKGIKRLNRNAMVFQKACPELVLIVENGF----YEASSIYSAVKKCTEEFLEK 173 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTH+P+++ ++ V +D + +A + L N + + Sbjct: 174 DIDTLVLGCTHFPILLPFIERVVDNKVTVVDPAIKLAHEVKKYLVENNLVKDKKGGQIRF 233 Query: 251 FLSGKPDIAMR 261 ++G+ + ++ Sbjct: 234 LVTGEKENFIK 244 >gi|172061157|ref|YP_001808809.1| glutamate racemase [Burkholderia ambifaria MC40-6] gi|171993674|gb|ACB64593.1| glutamate racemase [Burkholderia ambifaria MC40-6] Length = 287 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 112/276 (40%), Gaps = 12/276 (4%) Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M + + P + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++ Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSQHAPYGPRDEA 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + + L + VIACNTA +R S+ +G P IK AAA + Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +G+ +L+T +TL L+ Y + L +E ++ Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRT 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +E D +VL CTHYP R + + +D SD+IAR+ +L Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLTIVDTSDAIARQLARVLDERG 234 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 TR +G GL + Sbjct: 235 LRAPAGTRAAPP-RFCSTGDGRQLHALASTLLGLDA 269 >gi|229817186|ref|ZP_04447468.1| hypothetical protein BIFANG_02445 [Bifidobacterium angulatum DSM 20098] gi|229784975|gb|EEP21089.1| hypothetical protein BIFANG_02445 [Bifidobacterium angulatum DSM 20098] Length = 259 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 98/253 (38%), Gaps = 7/253 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ V +++ MP+ +Y D PYG ++ + + Sbjct: 5 APIGVFDSGLGGISVARQIAHDMPDEKVLYFGDSANAPYGTKTPQQVRDLSFAIVEQFV- 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131 K VIACNTA + D LR T+ + +G PA+K A + + + +TP T Sbjct: 64 KQGVKAVVIACNTATSAAADALRDTY-DIPIIGMEPALKVACDRGHGHRQRVIVAATPLT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 LR + L+ + + I L + VE D + + + F + Sbjct: 123 LRERKFAKLMDRFKADHTIFPEPCPGLVNIVEHGQLD---DHDTVMRTLHHYFGNYDLPT 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+ FR+L P +D ++ R +L + + Sbjct: 180 IDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLHVVLESLGKLAPEGAEGGVTI 239 Query: 252 LSGKPDIAMRRLM 264 + L Sbjct: 240 ANSDTSPRTAELA 252 >gi|251794653|ref|YP_003009384.1| glutamate racemase [Paenibacillus sp. JDR-2] gi|247542279|gb|ACS99297.1| glutamate racemase [Paenibacillus sp. JDR-2] Length = 258 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 8/242 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I IFDSG+GGL VL + +P ++IY+AD PYG + ++ ++ ++ + Sbjct: 2 TIGIFDSGLGGLTVLAEALKRLPAENYIYMADTKHVPYGTKSEEEVRDFVLQTVEQMVAE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATL 132 V+ACNTA ++ +ELR + S +G PA+K A + + + +TP TL Sbjct: 62 G-IDALVVACNTATSIAINELRERY-SFPIIGMEPAVKPAVEMNRATGKKVLVWATPLTL 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R L+ + + + L E ++ +D +K + Sbjct: 120 RMPKYYALVSRVDEEGIVDSLPMPELVQYCEA----LQFDKDVLKDYFLAKLAPYDLNEY 175 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 ++VL CTH+P + R + P + ++ + RR +L R R Sbjct: 176 GILVLGCTHFPFYTSILRNVLPPHIQIVNGNLGTIRRLTAMLSRYGIGTGRGSGQVRFMC 235 Query: 253 SG 254 +G Sbjct: 236 TG 237 >gi|238760127|ref|ZP_04621275.1| Glutamate racemase [Yersinia aldovae ATCC 35236] gi|238701625|gb|EEP94194.1| Glutamate racemase [Yersinia aldovae ATCC 35236] Length = 241 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 123/237 (51%), Gaps = 4/237 (1%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 +P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L Sbjct: 2 LPDLHYIYAFDNVAFPYGEKSGEFIIERVVEIVTAVQQRHPLAIVVIACNTASTVSLPAL 61 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S Sbjct: 62 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTRDLIERFATDCKIELLGS 120 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 L E G + ++ +KK + +E D IVL CTH+PL+ Q+ P Sbjct: 121 SELVELAETKLHGGVVPQEALKKILHPWLAMREP--PDTIVLGCTHFPLLTEELAQVLPE 178 Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271 +D+ +IARR L+ + ++ A ++ D A+ ++QG+G + Sbjct: 179 GTRMVDSGAAIARRTAWLISSQENVVSSQDENIAYCMALNADTDALLPVLQGYGFPT 235 >gi|238785771|ref|ZP_04629743.1| Glutamate racemase [Yersinia bercovieri ATCC 43970] gi|238713305|gb|EEQ05345.1| Glutamate racemase [Yersinia bercovieri ATCC 43970] Length = 241 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 123/237 (51%), Gaps = 4/237 (1%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 +P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L Sbjct: 2 LPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 61 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S Sbjct: 62 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTLDLIARFATDCKIELLGS 120 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 L E G + + +KK + +E D IVL CTH+PL+ Q+ P Sbjct: 121 SELVELAESKLHGGVVSVEALKKILHPWLAMREP--PDTIVLGCTHFPLLAEELAQVLPE 178 Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271 +D+ +IARR L+ + ++ A ++ D A+ ++QG+G ++ Sbjct: 179 GTRMVDSGAAIARRTAWLISSQENVVSSQDENMAYCMALNTDTDALLPVLQGYGFQT 235 >gi|284043326|ref|YP_003393666.1| glutamate racemase [Conexibacter woesei DSM 14684] gi|283947547|gb|ADB50291.1| glutamate racemase [Conexibacter woesei DSM 14684] Length = 283 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 9/261 (3%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + I +FDSG+GGL VL ++ +P F+Y+ D FPYG+ L+ Sbjct: 1 MPATTERAASDRPIAVFDSGVGGLTVLHELLVSLPSEDFLYLGDTARFPYGDKSQEELRV 60 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAV-PAIKQAAAYTQ 119 + +L L V+AC +A L + LG + PA + A T Sbjct: 61 CSAEIADHLLVAGA-KLLVVACGSATAAALPLLEERLAGSGVDVLGVIAPAAQLAVEATA 119 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 SG I +L+TPAT+ +N I + + V LA + G E + + Sbjct: 120 SGRIGVLATPATVASGAYANAIAASDPHVRLESVPCPDLAPII---QSGFPFDERVV-ET 175 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + D ++L THYPL+ + +++ V + + + + R L + Sbjct: 176 VRRYTAPLRAAEVDTVILGSTHYPLVAPMLQRMLGRGVHLVTSGEGVVRSVERALGARDL 235 Query: 240 HQTRVFD-DHALFLSGKPDIA 259 R + D+ +G + Sbjct: 236 LNGRDGEGDYRFHCTGDVEAF 256 >gi|212550932|ref|YP_002309249.1| glutamate racemase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549170|dbj|BAG83838.1| glutamate racemase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 276 Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 11/251 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K++ SI IFDSG GG +L+K+R+ +P Y F+Y+ D+ PYG + + + Sbjct: 2 KVKGSIGIFDSGYGGFTILEKIRYRLPRYDFLYLGDNARAPYGTRSFEIVYEFTLQSVRK 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLIS 124 + +K L ++ACNT+ ++ P LG + P ++ TQ+ I Sbjct: 62 LFEKG-CHLVILACNTSSAKALRTIQQNDLPSIAPQKRLLGVIRPTVEAVGRLTQTRHIG 120 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L T T+ S + + + + S VE + +K+ I Sbjct: 121 VLGTQGTILSGSYSIEMKRLFPDIVVTGEACPMWVSLVENGEYDRPGADYFVKQHINSIL 180 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--T 242 + D +VL CTHYPL+ +Q P V L +A L R Sbjct: 181 --NKDPLIDTLVLGCTHYPLLETKIKQYLPKSVSILSQGKYVAEGLADYLRRHPEIDMCC 238 Query: 243 RVFDDHALFLS 253 + + Sbjct: 239 SKNSVECFYTT 249 >gi|167756830|ref|ZP_02428957.1| hypothetical protein CLORAM_02379 [Clostridium ramosum DSM 1402] gi|237734546|ref|ZP_04565027.1| glutamate racemase [Mollicutes bacterium D7] gi|167703005|gb|EDS17584.1| hypothetical protein CLORAM_02379 [Clostridium ramosum DSM 1402] gi|229382366|gb|EEO32457.1| glutamate racemase [Coprobacillus sp. D7] Length = 264 Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 103/248 (41%), Gaps = 11/248 (4%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MKI+ ++ I DSG+GGL VL++ +MP FIY D + PYG + Sbjct: 1 MKIN-----EERNLPIGFIDSGLGGLSVLKEAIKIMPHEDFIYYGDSLNAPYGTKSVDEI 55 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + + +L L+V ACNTA + +LR +P + +G PAIK A Sbjct: 56 RDLTFAIVDKLLKLGIKGLAV-ACNTATSAAVRQLRIMYPDLTIVGIEPAIKPAVESNHG 114 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G I +++TP T+++ + L+ Y + I VS L VE ++ Sbjct: 115 GEILVMATPMTIKQEKFNRLLDIYKDRAKIIPVSCKGLMEFVEHGNLNGSF----LEAYF 170 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINT 239 + T+ IVL CTHYP + ++ + +D S + + L Sbjct: 171 NETLVPYLNDTTETIVLGCTHYPFLRPYLKEFLGERRIQIIDGSHGTSCELKRQLAGKKL 230 Query: 240 HQTRVFDD 247 Q + Sbjct: 231 LQKENHEG 238 >gi|237744604|ref|ZP_04575085.1| glutamate racemase [Fusobacterium sp. 7_1] gi|256027373|ref|ZP_05441207.1| glutamate racemase [Fusobacterium sp. D11] gi|260494464|ref|ZP_05814594.1| glutamate racemase [Fusobacterium sp. 3_1_33] gi|289765339|ref|ZP_06524717.1| glutamate racemase [Fusobacterium sp. D11] gi|229431833|gb|EEO42045.1| glutamate racemase [Fusobacterium sp. 7_1] gi|260197626|gb|EEW95143.1| glutamate racemase [Fusobacterium sp. 3_1_33] gi|289716894|gb|EFD80906.1| glutamate racemase [Fusobacterium sp. D11] Length = 264 Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72 I IFDSG+GG VL++M +P +IY D+ FPYG+ + L+K + + Sbjct: 6 QRIGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 K L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T Sbjct: 66 -KNNCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKNTKNKNIAVISTKFT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 N S+ ++ ++ + A +E +KE+ ++ + K Sbjct: 124 AESHGYKNKAKMLDSELNVKEIACIEFAQMIESGWDTFDN-----RKELLNKYLSEIPKN 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250 TD +VL CTHYPLI + + +D + I RA L +N + Sbjct: 179 TDTLVLGCTHYPLIRKDIEK--NTKIKVVDPAVEIVERATQTLTSLNLLNDKKEKGRIIF 236 Query: 251 FLSGK 255 F++G+ Sbjct: 237 FVTGE 241 >gi|319937290|ref|ZP_08011697.1| glutamate racemase [Coprobacillus sp. 29_1] gi|319807656|gb|EFW04249.1| glutamate racemase [Coprobacillus sp. 29_1] Length = 260 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 11/257 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I IFDSG+GGL VL ++ +P + IY+ D+ PYG+ H L + Sbjct: 1 MDKPIGIFDSGVGGLTVLTALQKELPHENMIYIGDNAHCPYGDKTKHQLLSYTKEICDYF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + + V+ACNT + EL+ + + +G + + + I++T AT Sbjct: 61 ISQ-NVKMIVLACNTTSANVLAELQELY-QVPVVGVIHSTVHDFLTRKKKCPLIIATHAT 118 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + +I Y I + + L +E I++ +E F K Sbjct: 119 IESHKYREIIMHYEPDIQIFELETPALVPLIESGQYKKGIQD-----VLEHYFYPYVNK- 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250 D ++L CTHYP+++ +++ P +++ +S+SI + L + +++ + Sbjct: 173 VDSLILGCTHYPIVLEQIKEVFPNK-EYISSSESICQEVASYLRVHHILNESNDSGATVI 231 Query: 251 FLSGKPDIAMRRLMQGF 267 + +G P R +GF Sbjct: 232 YTTGDPHEF-RYSSEGF 247 >gi|296393941|ref|YP_003658825.1| glutamate racemase [Segniliparus rotundus DSM 44985] gi|296181088|gb|ADG97994.1| glutamate racemase [Segniliparus rotundus DSM 44985] Length = 274 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 7/259 (2%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + I +FDSG+GGL V + + L+P YVAD PYG +++ + + Sbjct: 4 PNPEAPIGVFDSGVGGLTVARAVADLLPHEAMRYVADSAHQPYGPQSVAQVRRHALAVLD 63 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++D+ + VIACN+A + R +P +PA++ A A T+SG I ++ T Sbjct: 64 SLVDEG-VKMLVIACNSASVACLADARERYPVPVVEVVLPAVRSALAATRSGRIGVIGTR 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ + + + +E+ + E++ Sbjct: 123 ITIASRAYEDSFAAVAPHTSVVSAPCPRFVDFIEQGV----VSGPELEALALEYLAPLTA 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 DV+VL CTHYPL+ + + V + S+ A+ +L T + + Sbjct: 179 ADVDVLVLGCTHYPLLADLIGAVMGPDVRLVSPSEETAKDIARILAAEGTARPAAQGPAS 238 Query: 250 LFLSGKPDIAMRRLMQGFG 268 + ++ A +L+Q G Sbjct: 239 VLVTQT--GASEQLLQWAG 255 >gi|319427429|gb|ADV55503.1| glutamate racemase [Shewanella putrefaciens 200] Length = 270 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 82/252 (32%), Positives = 132/252 (52%), Gaps = 2/252 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILEVISKA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T Sbjct: 61 NSLTQPDIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Y LI ++ ++C + + S +L E+ G + + +E++ F + + Sbjct: 120 VNSAYVKMLITNFATECKVLIEDSEVLVLASEQKLLGNGFDPNIVTQEVQRIFSKPDAFN 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250 TDV+VLACTH+PLI + P V +D+ +IA R LL T + + Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQTCSPILDPEITF 239 Query: 251 FLSGKPDIAMRR 262 + +G D + Sbjct: 240 YTTGNVDSEQAK 251 >gi|329119913|ref|ZP_08248587.1| glutamate racemase [Neisseria bacilliformis ATCC BAA-1200] gi|327464069|gb|EGF10380.1| glutamate racemase [Neisseria bacilliformis ATCC BAA-1200] Length = 270 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 9/264 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 Q + +FDSG+GGL ++ + +P +Y D PYG ++ + Sbjct: 1 MNTAAQCPVGVFDSGVGGLTNVRALMERLPMESIVYFGDTARVPYGVKSRATIEAFTAQI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126 +L+ + VIACNT + ++R +M L + + A A T++ I ++ Sbjct: 61 VGFMLE-HDVKALVIACNTIAAVAGHKVRQMAGNMPVLDVISAGAEAALAATRNNHIGVI 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ + IH + V+ + VEE ++ ++ ++ + Sbjct: 120 ATNTTVNSNAYAREIHRKNPAARVQSVACPLFVPLVEEGWLDHEVTRLTAREYLKPILAD 179 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRV 244 D +VL CTHYPL+ + + +P + +D++ + A A L + Sbjct: 180 ----TADTLVLGCTHYPLLKPLLHREAP-GLTLVDSAATTAEAAARALCAHGLLNDGSGG 234 Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268 D+ ++S P + G Sbjct: 235 APDYRFYVSDIPLRFQTIGERFLG 258 >gi|116235003|dbj|BAF34941.1| putative glutamate racemase [Hydrogenobacter thermophilus] Length = 206 Score = 257 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 98/212 (46%), Gaps = 10/212 (4%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL++++ P +Y+ D PYG + + + ++ ++ Sbjct: 4 GVFDSGVGGLTVLKEIKKAFPSLDLVYLGDTARVPYGGKSKDTIIRYSLECAEFLI-RFD 62 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA + D L+ + G + P +++A +++ +I ++ T +T++ Sbjct: 63 IDLLVVACNTASSYALDILKKEL-GIPVFGVIKPGVRKALEVSKNKVIGVIGTKSTIKSG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + ++ + + VEE D + K ++ + + + D + Sbjct: 122 VYQRSLME--AGSVVYAKACPLFVPLVEEGLT----HGDIVDKVVDFYLRDFKNTQMDTL 175 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 +L CTHYPL+ + V +D++ ++ Sbjct: 176 ILGCTHYPLLAEAIKNYMG-DVQIVDSASALV 206 >gi|34762406|ref|ZP_00143407.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237742084|ref|ZP_04572565.1| glutamate racemase [Fusobacterium sp. 4_1_13] gi|256845420|ref|ZP_05550878.1| glutamate racemase [Fusobacterium sp. 3_1_36A2] gi|294785284|ref|ZP_06750572.1| glutamate racemase [Fusobacterium sp. 3_1_27] gi|27887931|gb|EAA24998.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229429732|gb|EEO39944.1| glutamate racemase [Fusobacterium sp. 4_1_13] gi|256718979|gb|EEU32534.1| glutamate racemase [Fusobacterium sp. 3_1_36A2] gi|294486998|gb|EFG34360.1| glutamate racemase [Fusobacterium sp. 3_1_27] Length = 264 Score = 257 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72 I IFDSG+GG VL++M +P +IY D+ FPYG+ + L+K + + Sbjct: 6 QKIGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 K L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T Sbjct: 66 -KNNCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKNTKNKNIAVISTKFT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 N S+ ++ ++ + A +E +KE+ ++ + K Sbjct: 124 ADSHGYKNKAKMLDSELNVKEIACIEFAQMIESGWDTFDN-----RKELLNKYLSEIPKN 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250 TD +VL CTHYPLI + + +D + I RA L +N + Sbjct: 179 TDTLVLGCTHYPLIRKDIEKNI--KIKVVDPAVEIVERATQTLSSLNLLNDKKEKGRIIF 236 Query: 251 FLSGK 255 F++G+ Sbjct: 237 FVTGE 241 >gi|115352286|ref|YP_774125.1| glutamate racemase [Burkholderia ambifaria AMMD] gi|115282274|gb|ABI87791.1| glutamate racemase [Burkholderia ambifaria AMMD] Length = 287 Score = 257 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 112/276 (40%), Gaps = 12/276 (4%) Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M + + P + + +FDSG+GGL VL+ +R +P F+YVAD PYG ++ Sbjct: 1 MTMTHQPAASGARPAGPVGLFDSGLGGLSVLRAVRAHLPGESFVYVADSQHAPYGPRDEA 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + + L + VIACNTA +R S+ +G P IK AAA + Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +G+ +L+T +TL L+ Y + L +E ++ Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRT 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +E D +VL CTHYP R + + +D SD+IAR+ +L Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLTIVDTSDAIARQLARVLDERG 234 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 TR +G GL + Sbjct: 235 LRAPAGTRAAPP-RFCSTGDGRQLHALASTLLGLDA 269 >gi|120597779|ref|YP_962353.1| glutamate racemase [Shewanella sp. W3-18-1] gi|120557872|gb|ABM23799.1| glutamate racemase [Shewanella sp. W3-18-1] Length = 270 Score = 257 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 84/252 (33%), Positives = 131/252 (51%), Gaps = 2/252 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T Sbjct: 61 SSLTQPDIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Y LI ++ ++C + + S L E+ G D + +EI+ F + + Sbjct: 120 VNSAYVKMLITNFATECKVLVEDSEALVLASEQKLLGNGFDPDIVTQEIQRIFSKPDAFN 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250 TDV+VLACTH+PLI + P V +D+ +IA R LL T + + Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQTCSPILDPEITF 239 Query: 251 FLSGKPDIAMRR 262 + +G D + Sbjct: 240 YTTGNVDSEQAK 251 >gi|312113587|ref|YP_004011183.1| glutamate racemase [Rhodomicrobium vannielii ATCC 17100] gi|311218716|gb|ADP70084.1| glutamate racemase [Rhodomicrobium vannielii ATCC 17100] Length = 282 Score = 257 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 104/242 (42%), Positives = 141/242 (58%), Gaps = 4/242 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L DSG+GGL VL+ R +PE +++ADD FPYG+ + L +RL+ L L ++ Sbjct: 11 LFLDSGLGGLTVLRAARAAIPEAEVLFIADDAAFPYGSKPEGELVERLLDLVGGALAAFE 70 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 P V+ACNTA T+ LR+ F S+ F+G VPAIK AAA T+SGL+S+L+TP T+ R Y Sbjct: 71 PDCVVLACNTASTVALSALRAAF-SVPFVGTVPAIKPAAAITRSGLVSVLATPGTVAREY 129 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI Y + LV + LA E+YA G + + I +EI CF+E RTDV+V Sbjct: 130 THTLIEKYALGARVALVGAANLAELAEDYASGETVSDAAIAREIAPCFVEDADARTDVVV 189 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFDDHALFLS 253 L CTHYPL++ LSPWPV WLD + +IARR +L + F S Sbjct: 190 LGCTHYPLLLERLDALSPWPVTWLDPAPAIARRIANVLSERGHIVGVGAKRGHGTIAFTS 249 Query: 254 GK 255 G+ Sbjct: 250 GR 251 >gi|313673160|ref|YP_004051271.1| glutamate racemase [Calditerrivibrio nitroreducens DSM 19672] gi|312939916|gb|ADR19108.1| glutamate racemase [Calditerrivibrio nitroreducens DSM 19672] Length = 261 Score = 257 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 13/243 (5%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GGL V + + YV D PYGN + K + L ++ Sbjct: 2 SIGVFDSGVGGLTVFKSIADRFKTVDIYYVGDTARVPYGNKSRDTIVKYSLELTEFLVKS 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + L V+ACNTA + D L++ + ++ +G V P A T++G I ++ T AT+ Sbjct: 62 FAVDLVVVACNTASSYALDFLKNRY-NIPIIGVVEPGCIAAINATKNGKIGVIGTQATIN 120 Query: 134 RTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +N + + ++ +L VEE + + +K+ ++G E Sbjct: 121 SNSYANTLSALTGGGVRVYQKGCPLLVPLVEEGKIEHPVTKIILKEYLDGIVSE----GI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYP++ V + P ++ +D+S +I L +N R LF+ Sbjct: 177 DTLILGCTHYPVLKDVINSIYPE-LNLVDSSVAIIDYIHKLNLDLNEKGLRN-----LFV 230 Query: 253 SGK 255 + + Sbjct: 231 TDE 233 >gi|104773633|ref|YP_618613.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422714|emb|CAI97341.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 261 Score = 257 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 6/249 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++ + I +FDSG GGL VL ++ LMP +++ D PYG + + + Sbjct: 2 SKEYVDRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRV 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++ Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP TL + + L+ + V + L +E+ + I + +E Sbjct: 121 TPLTLEQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 GK +VL CTH+P +++ D + A + L + Sbjct: 177 VGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASQDELNASSQPG 235 Query: 248 HALFLSGKP 256 LF + P Sbjct: 236 QILFENSAP 244 >gi|52842520|ref|YP_096319.1| glutamate racemase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629631|gb|AAU28372.1| glutamate racemase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 288 Score = 257 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 10/256 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + Sbjct: 18 NSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMA 77 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILS 127 ++++ VIACNTA T L+S + L P A + T++ I++L+ Sbjct: 78 KILVERR-IKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLA 136 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ +LI + + + + +L + EE + + +K ++ E Sbjct: 137 TETTIASRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE- 195 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245 D ++L CTH+P+ + L P V +D++ + A LL N H Sbjct: 196 -----DAVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNLHNDNLEAP 250 Query: 246 DDHALFLSGKPDIAMR 261 ++ + + Sbjct: 251 PRINYLVTDSINRFQK 266 >gi|317508768|ref|ZP_07966418.1| Asp/Glu/Hydantoin racemase [Segniliparus rugosus ATCC BAA-974] gi|316252931|gb|EFV12351.1| Asp/Glu/Hydantoin racemase [Segniliparus rugosus ATCC BAA-974] Length = 287 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 7/258 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I +FDSG+GGL V + + L+P YVAD PYG ++K + + Sbjct: 5 KSEAPIGVFDSGVGGLTVARAIAELLPNEEMRYVADSAHQPYGPQSVAQVRKHALAVLDS 64 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++++ + VIACN+A + R +P +PA++ A A T++G I ++ T Sbjct: 65 LVEEG-VKMLVIACNSASVACLADARERYPVPVVEVVLPAVRSALAATRTGRIGVIGTRI 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + I +E + ++ E Sbjct: 124 TIASRAYEDSFAAVAPHTRIVSAPCPQFVDFIERGV----VSGPRLEALAREYLAPLEAA 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 DV+VL CTHYPL+ + ++ V + S+ A+ +L + + Sbjct: 180 DVDVLVLGCTHYPLLAELIGEVMGPGVRLVSPSEETAKDVARILAAEGVSRPGAGAPAPV 239 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++ RL Q G Sbjct: 240 LVTQT--GQSDRLFQWAG 255 >gi|114799484|ref|YP_761669.1| glutamate racemase [Hyphomonas neptunium ATCC 15444] gi|114739658|gb|ABI77783.1| glutamate racemase [Hyphomonas neptunium ATCC 15444] Length = 290 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 138/263 (52%), Gaps = 4/263 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + +L+FDSG+GGL V ++R L P Y AD FPYG+ D AL+ RL + Sbjct: 11 PSPARGRVLVFDSGVGGLTVAAEIRALGPRLSVHYAADTGFFPYGDKSDEALRARLPVVA 70 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 +++ +P + VIACNTA TL E+R+ + +G VPAIK AA T++G I +L+T Sbjct: 71 KALVEAVRPDVFVIACNTASTLALPEVRAVL-DIPVVGTVPAIKPAAKLTETGTIGLLAT 129 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 P T+RR YT+ LI + S + L S+ L E +A G + + F Sbjct: 130 PGTIRRAYTARLIEEFASGKRVILHGSLDLVKLAEAHARGEDVPPEAFAAAQAPLFTAPG 189 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 G + D IVLACTH+PL+ +P V ++D+ +IAR+ +LP N ++ Sbjct: 190 GDQIDTIVLACTHFPLVRGQLIATAPHAVSYIDSGAAIARQTIRVLPARN--ESGGQGGT 247 Query: 249 ALFLS-GKPDIAMRRLMQGFGLK 270 A S + + + R+++ +G Sbjct: 248 ACLTSPPEREEGITRVLRRYGFP 270 >gi|325684586|gb|EGD26745.1| glutamate racemase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 261 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 6/249 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++ I +FDSG GGL VL ++ LMP +++ D PYG + + + Sbjct: 2 SKEYADRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRV 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++ Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP TL + + L+ + V + L +E+ + I + +E Sbjct: 121 TPLTLEQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 GK +VL CTH+P +++ D + A + L + Sbjct: 177 VGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPG 235 Query: 248 HALFLSGKP 256 LF + P Sbjct: 236 QILFENSAP 244 >gi|294500374|ref|YP_003564074.1| glutamate racemase [Bacillus megaterium QM B1551] gi|294350311|gb|ADE70640.1| glutamate racemase [Bacillus megaterium QM B1551] Length = 266 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 8/242 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL + P+ F+Y AD PYG + K + DIL + Sbjct: 3 IGFFDSGIGGISVLNEAIKHFPKEDFLYYADTRNVPYGTRTKEEVNKHVQTAVEDILKQE 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133 L VIACNTA ++ +ELRST+ + +G PA K A + S + + +T TL+ Sbjct: 63 VKAL-VIACNTATSISINELRSTY-DIPIIGMEPAAKPAIELSSSMDKRVLVFATDLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 LI + + L E + D++ + + Sbjct: 121 ELKYKKLITRIDKDSIVDPLPLPELVEFCE----DLNFNWDKLSTYFRTKLEGFDLNQYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTH+P V + L P + +D S R LL + T +D + S Sbjct: 177 TVVLGCTHFPYYKPVLKDLLPSHIQLIDGSKGTVERLSSLLEEKSLLSTNGTNDISFQCS 236 Query: 254 GK 255 Sbjct: 237 SN 238 >gi|116513625|ref|YP_812531.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092940|gb|ABJ58093.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 261 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 6/249 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++ I +FDSG GGL VL ++ LMP +++ D PYG + + + Sbjct: 2 SKEYADRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRV 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++ Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP TL + + L+ + V + L +E+ + I + +E Sbjct: 121 TPLTLEQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 GK +VL CTH+P +++ D + A + L + Sbjct: 177 VGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNAGSQPG 235 Query: 248 HALFLSGKP 256 LF + P Sbjct: 236 QILFENSAP 244 >gi|89256134|ref|YP_513496.1| glutamate racemase [Francisella tularensis subsp. holarctica LVS] gi|115314607|ref|YP_763330.1| glutamate racemase [Francisella tularensis subsp. holarctica OSU18] gi|156502156|ref|YP_001428221.1| glutamate racemase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009837|ref|ZP_02274768.1| glutamate racemase [Francisella tularensis subsp. holarctica FSC200] gi|290953270|ref|ZP_06557891.1| glutamate racemase [Francisella tularensis subsp. holarctica URFT1] gi|295313512|ref|ZP_06804107.1| glutamate racemase [Francisella tularensis subsp. holarctica URFT1] gi|89143965|emb|CAJ79186.1| glutamate racemase [Francisella tularensis subsp. holarctica LVS] gi|115129506|gb|ABI82693.1| glutamate racemase [Francisella tularensis subsp. holarctica OSU18] gi|156252759|gb|ABU61265.1| glutamate racemase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 265 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL +++ + ++P IY D PYG ++K + ++ Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAVQTAKFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D+ + +IACNT + KD ++ ++ + + A + + +++TPAT+ Sbjct: 64 DQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH ++ + S +EE I E K+ + K Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSY----FHDKNI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 ++L CTHYP+I ++ V +D S ++ LL T+ ++ + Sbjct: 177 QTLILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234 Query: 252 LSGKP 256 ++ P Sbjct: 235 VTDIP 239 >gi|94969536|ref|YP_591584.1| glutamate racemase [Candidatus Koribacter versatilis Ellin345] gi|166231022|sp|Q1INP0|MURI_ACIBL RecName: Full=Glutamate racemase gi|94551586|gb|ABF41510.1| glutamate racemase [Candidatus Koribacter versatilis Ellin345] Length = 291 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 27/281 (9%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + + I +FDSG GGL VL+++ L+P ++Y D PYG + + + Sbjct: 1 MSRQRPVIGVFDSGFGGLTVLREIVRLVPNAEYLYFGDTARLPYGTKSADTVARYALGAC 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 L+ VIACNTA L D + + A P AAA +++ ++++ T Sbjct: 61 H-FLEGQGAEHLVIACNTATALAMDAIEAKANVPAIGVVEPGASAAAAISKTRSVAVIGT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + + + + ++ +L VEE + + + ++ F+ + Sbjct: 120 EATISSHAYHHALERL--GINAYEKATPLLVPLVEEGWTDHPVTKQVAEIYLQDAFV-RR 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-------------- 234 +R+DV+VL CTHYPLI + R++ P V +D+++S A+ L Sbjct: 177 EQRSDVLVLGCTHYPLIRPLLRKVVPSDVAIVDSAESTAKALAKKLGIAPPSASAAGATQ 236 Query: 235 --------PRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 D F++ RRL GF Sbjct: 237 AAGARAQMAPSAPEPKEGTPDFRFFVTDSVQKF-RRLGSGF 276 >gi|150018421|ref|YP_001310675.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052] gi|149904886|gb|ABR35719.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052] Length = 267 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 9/241 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL ++P +IY AD PYG +KK ++ I+++ Sbjct: 3 IGFFDSGIGGITVLYDTLKVLPNEDYIYYADTSNVPYGPKPKDEVKKYILNAIDFIVEQG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133 VIACNTA ++ + LRS + S+ +G PA+K A + + + + +T TL+ Sbjct: 63 -VKAVVIACNTATSVAIEALRSKY-SIPIIGMEPAVKPAIEKNKDMNKRVLVTATALTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NLI+ ++ + L+ L E ++ E + ++ + + + Sbjct: 121 EEKLHNLIYKLDNEHVVDLLPLPGLVQFSER----LEFDEQIVLPYLKEELFKFDLNNYE 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTH+ + R+L P V +D + A+ + +L +N + + S Sbjct: 177 AIVLGCTHFSYYKDMVRKLVPSNVSIIDGNIGTAKNLKRILKEMNLLN-EGHGNITFYNS 235 Query: 254 G 254 G Sbjct: 236 G 236 >gi|294791442|ref|ZP_06756599.1| glutamate racemase [Scardovia inopinata F0304] gi|294457913|gb|EFG26267.1| glutamate racemase [Scardovia inopinata F0304] Length = 263 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 7/236 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GG+ V++++R +P ++ D PYG +K+ + +L Sbjct: 3 NAPIGVFDSGMGGISVVRQIRQDLPHEDILFYGDSAHAPYGTKPTEQVKELSFAVTRHLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPA 130 + VIACNTA + +LRS+ S+ +G PA+K A + + +L+T Sbjct: 63 SRG-VKAIVIACNTATSAAAPDLRSSL-SLPVIGMEPALKVACDRGEGKPQNVLVLATSL 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR + L+ IH + L S VE G D K I + Sbjct: 121 TLREKKFARLVEQVRGNNTIHTQACPDLVSLVES---GKVEDRDLAIKTITSYLKPYDLN 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D +VL CTH+ + FRQ+ P V +D + + R +L R + Sbjct: 178 SLDSVVLGCTHFIFYRNYFRQILPDSVAIIDGNAGTSHHVRTILEESGNLADRPDN 233 >gi|256847951|ref|ZP_05553395.1| glutamate racemase [Lactobacillus coleohominis 101-4-CHN] gi|256715011|gb|EEU29988.1| glutamate racemase [Lactobacillus coleohominis 101-4-CHN] Length = 267 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 108/267 (40%), Gaps = 17/267 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V++ +R +P ++V D FPYG + + Sbjct: 1 MDNRP--------IGVMDSGLGGLSVIRIIREQLPNESIVFVGDQGHFPYGVRTQENVCQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + ++ Y + +IACNTA L+ P + +G + P + A A + Sbjct: 53 LALNIGRYLMT-YDIKMMIIACNTATAASLPTLQKELP-IPVIGVIKPGAEAALAQPKHA 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I + +T T++ IH + ++ + S VE G ++ + ++ Sbjct: 111 RIGVTATEGTIKAGAYPKTIHELNPDVTVIPKAAQPMVSVVEHNEVGTPKAQEVVNEQ-- 168 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH- 240 + + DV+VL CTH+P + L P V +D + + A+ +L + Sbjct: 169 --LAIFKKQPVDVLVLGCTHFPFLAKEISNLLP-DVKLVDPALETVKTAKQMLTEADQLT 225 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267 + L+ +G + Sbjct: 226 SSDQPGTMKLYSTGDFQELQTGAEKWL 252 >gi|83312678|ref|YP_422942.1| glutamate racemase [Magnetospirillum magneticum AMB-1] gi|82947519|dbj|BAE52383.1| Glutamate racemase [Magnetospirillum magneticum AMB-1] Length = 273 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 4/248 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL VL+ +R +P IY+ D PYG + + ++ Sbjct: 8 PIGIFDSGVGGLTVLKAVRERLPGESLIYLGDTARLPYGTKSAQTVAAYALEATRRLVS- 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 Y ++A NT+ + LR+ FP + +G V P AAA + G I++++T + ++ Sbjct: 67 YGIKALLVADNTSSAHALEGLRAAFPGLPVIGVVEPGATAAAAASARGRIAVIATESAVQ 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + + + S VEE I E + ++ F + D Sbjct: 127 AGTYPRAILHSRPNAQVTQLPCPLFVSMVEEGLVDGPIAEQIARHYLDPLFSGPDAA--D 184 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L CTH+P + +FR+L V +D++ + A LL + Sbjct: 185 CLLLGCTHFPALAPLFRRLLGRDVAVVDSASTTAMVLEDLLSLRGLRAPGGTARVRYLAT 244 Query: 254 GKPDIAMR 261 P+ R Sbjct: 245 DAPERFAR 252 >gi|54298200|ref|YP_124569.1| hypothetical protein lpp2258 [Legionella pneumophila str. Paris] gi|53751985|emb|CAH13411.1| hypothetical protein lpp2258 [Legionella pneumophila str. Paris] gi|307611149|emb|CBX00793.1| hypothetical protein LPW_24971 [Legionella pneumophila 130b] Length = 279 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 10/256 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + Sbjct: 9 NSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMA 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILS 127 ++++ VIACNTA T L+S + L P A + T++ I++L+ Sbjct: 69 KILVERR-IKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ +LI + + + + +L + EE + + +K ++ E Sbjct: 128 TETTIASRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245 D ++L CTH+P+ + L P V +D++ + A LL N H V Sbjct: 187 -----DAVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNLHNDNLEVP 241 Query: 246 DDHALFLSGKPDIAMR 261 ++ + + Sbjct: 242 PRINYLVTDSINRFQK 257 >gi|239905425|ref|YP_002952164.1| glutamate racemase [Desulfovibrio magneticus RS-1] gi|239795289|dbj|BAH74278.1| glutamate racemase [Desulfovibrio magneticus RS-1] Length = 270 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 95/257 (36%), Gaps = 6/257 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GGL V + + L+P +Y D PYG + + + +L Sbjct: 5 NSPIGIFDSGVGGLTVARAVMELLPNEPVVYFGDTARVPYGVKSPDTVARYAAQITRFLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K L ++ACNT + + + P A A T++ I I++TP+T+ Sbjct: 65 EK-NVKLLIVACNTMAAVALPAITNIAPVPVLEVIDAGAASALAATRTRRIGIIATPSTV 123 Query: 133 RRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + H + + EE + + Sbjct: 124 ASQAYEQALARLGGPDVHTVAKACPLFVPLAEEGLT----DHPATRLIAAEYLTPLAAEN 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYPL+ + + V D++ ++ARRA +L H+ Sbjct: 180 LDTLILGCTHYPLLAPLLADVVGPSVRLQDSATAVARRAAAILDEKGLRHAGPSPRHSFH 239 Query: 252 LSGKPDIAMRRLMQGFG 268 ++ P + G Sbjct: 240 VTDMPHRFQAIGQRFLG 256 >gi|283853806|ref|ZP_06371029.1| glutamate racemase [Desulfovibrio sp. FW1012B] gi|283570810|gb|EFC18847.1| glutamate racemase [Desulfovibrio sp. FW1012B] Length = 268 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 98/255 (38%), Gaps = 6/255 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL V + + +P +Y D PYG + + + +L K Sbjct: 8 PIGIFDSGVGGLTVARAVMDRLPHESIVYFGDTARVPYGVKSPDTVARYAAQITRFLLAK 67 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L ++ACNT + + + P + A A T++ I I++TP+T+ Sbjct: 68 -DVKLLIVACNTMAAVALPAITALSPVPVIEVIDAGARSALAATRTKRIGIIATPSTIAS 126 Query: 135 TYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + H + + VEE + + E D Sbjct: 127 RAYERALTTLGGPGVHTASRACPLFVPLVEEGW----LDHPATRLVAEEYLAPLLAYDLD 182 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L CTHYPL+ + ++ + D++ ++A RA LL + Q HA ++ Sbjct: 183 TLILGCTHYPLLAPLLARVVGPGIRLQDSASAVAERAAALLAELGLGQADGRPGHAFHVT 242 Query: 254 GKPDIAMRRLMQGFG 268 P + G Sbjct: 243 DMPLKFREIGERFLG 257 >gi|328953591|ref|YP_004370925.1| Glutamate racemase [Desulfobacca acetoxidans DSM 11109] gi|328453915|gb|AEB09744.1| Glutamate racemase [Desulfobacca acetoxidans DSM 11109] Length = 267 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 12/259 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL++ +P+Y ++Y+ D+ PYG D + K + + Sbjct: 2 IGVFDSGFGGLAVLREFLQALPDYDYLYLGDNARIPYGTRSDQVVLKFTRQAVDYLF-RQ 60 Query: 76 QPVLSVIACNTAFTLIKDELRS-----TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129 +L ++AC+TA + ++ +P+ LG +P +++A + T SG I I+ T Sbjct: 61 GCILIILACHTASSKALRTIQQYYLPVHYPNNRVLGVVIPTVEEALSRTVSGRIGIIGTE 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ +H + + +L +E ++ + + K E Sbjct: 121 GTVASNSFPIELHKLNPGVQVFQQACPLLVPIIEAGEQDGEVADLMLNK----YLGPFEA 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248 R D ++L CTHY ++ + L + + + + A + L R R+ Sbjct: 177 HRIDTLILGCTHYSILKTKIKNLLGQKIQIICSGEVTAVKLADYLRRHPEINQRLSRTGQ 236 Query: 249 ALFLSGKPDIAMRRLMQGF 267 +L+ + L F Sbjct: 237 RHYLTTDLTPRFQDLASLF 255 >gi|218280883|ref|ZP_03487507.1| hypothetical protein EUBIFOR_00065 [Eubacterium biforme DSM 3989] gi|218217817|gb|EEC91355.1| hypothetical protein EUBIFOR_00065 [Eubacterium biforme DSM 3989] Length = 258 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 6/231 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 +N I +FDSG+GG+ VL M L+P + IY+ D PYG + KR + + + Sbjct: 2 NSKNPIGVFDSGLGGISVLHTMHSLLPNENLIYLGDSKYNPYGTKTKEEITKRCIAICDE 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + K VIACNTA + LR + + +G PA+K A + I++ +T Sbjct: 62 FI-KQDVKAIVIACNTATSACVKLLREKY-DVDIIGMEPALKVACDRGNNQRIAVWATEL 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL +NL+ + + HI V L VE+ + ++ ++ + K Sbjct: 120 TLSEKKFANLMDRFKDEHHIVKVPCPKLVRMVED---DKLDDTNLVESVLKEYLAACDYK 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 D IVL CTH+P +L P + ++ S + LL + Sbjct: 177 NLDSIVLGCTHFPFYTKYLERLCP-NIHIIEGSVGTTLHTKDLLEQKGLLN 226 >gi|149186762|ref|ZP_01865073.1| Glutamate racemase [Erythrobacter sp. SD-21] gi|148829670|gb|EDL48110.1| Glutamate racemase [Erythrobacter sp. SD-21] Length = 264 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 81/225 (36%), Positives = 119/225 (52%), Gaps = 1/225 (0%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + IL+FDSG+GGL VL ++R LMP+ IY AD G PYG + + R+ L Sbjct: 2 NSSSPILLFDSGVGGLTVLAELRQLMPKAPVIYAADMAGLPYGTKTEAEVAARVAGLLGR 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + ++Y P L IACNTA T+ +R + +G VPAIK AAA T++G I +L T A Sbjct: 62 MAERYNPRLICIACNTASTIALGMVREVLET-PIVGTVPAIKPAAALTKTGTIGLLGTQA 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R+ Y +L + S + + L + E G + DE+ K G ++ G+ Sbjct: 121 TVRQGYVDDLEREFASDKTLLRYGANDLVALGEHKLRGESVSVDEVAKAARGLVLQVGGE 180 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 D +VLACTH+PL+ R+ V ++ + IARR LL Sbjct: 181 DLDTVVLACTHFPLLEPELREAFGKHVTFVHGAQGIARRIAHLLE 225 >gi|310659702|ref|YP_003937423.1| glutamate racemase [Clostridium sticklandii DSM 519] gi|308826480|emb|CBH22518.1| glutamate racemase [Clostridium sticklandii] Length = 274 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 13/256 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 MK+ N K+ + I FDSGIGGL VL K +MP +IY AD PYG + Sbjct: 1 MKMSN----KEERYKIGFFDSGIGGLTVLHKALEMMPLEDYIYYADTENQPYGIKTKAEV 56 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-- 118 ++ + I+ K V+ACNTA ++ ++LR + + +G PA+K A YT Sbjct: 57 RELVFKAMDFIVSK-NVKAIVVACNTATSVAIEDLRKKY-DIPIIGMEPAVKPAVRYTDI 114 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++ + + +T TL+ NLI + S+ + L+ L E + E I K Sbjct: 115 ENKKVLVTATKLTLKEEKLHNLISALDSESIVDLLELQELVQFAER----LDFDETRITK 170 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +E F E + K +VL CTH+ + ++L + +D ++ R + +L Sbjct: 171 YLENQFKEIDLKDYQTLVLGCTHFIFFKDMIQKLVTKEISIIDGNEGTIRHLQNILRTKK 230 Query: 239 THQTRVFDDHALFLSG 254 + + + SG Sbjct: 231 SLN-QGSGKVEFYNSG 245 >gi|308068806|ref|YP_003870411.1| glutamate racemase [Paenibacillus polymyxa E681] gi|305858085|gb|ADM69873.1| Glutamate racemase [Paenibacillus polymyxa E681] Length = 267 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 13/251 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL + +P +F+Y+AD + PYG + + IL K Sbjct: 3 IGFFDSGLGGITVLSEALRRLPNENFVYMADTLHVPYGTKTPQEVLGYVKASVETIL-KE 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133 VIACNTA ++ ELR +P + +G PA+K A + + +L+TP TL+ Sbjct: 62 DVKALVIACNTATSIAVAELRKEYP-IPIIGMEPAVKPAVEMNRANGKRVLVLATPLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 ++ + L+ + + L E+ + E+ + Sbjct: 121 QSCYAALVSRVDDHGSVDSLPLPELVQYCEQ----LNFDRAEMSEYFNRELSSFNLDIYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-----RVFDDH 248 +VL CTHYP + R+L P + +D S RR + +L N ++ + H Sbjct: 177 TVVLGCTHYPFYKEILRELLPSHIQLIDGSQGTVRRLKQVLSERNLLESLPKYGPSQEGH 236 Query: 249 ALFLSGKPDIA 259 FL D A Sbjct: 237 ITFLCSSQDEA 247 >gi|332678480|gb|AEE87609.1| Glutamate racemase [Francisella cf. novicida Fx1] Length = 265 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL +++ + ++P IY D PYG ++K ++ Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + +IACNT + KD ++ ++ + + A + + +++TPAT+ Sbjct: 64 EQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH ++ + S +EE +I E K+ + K Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGEIVELVAKEYLSY----FHDKNI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 +VL CTHYP+I ++ V +D S ++ LL T+ ++ + Sbjct: 177 QALVLGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234 Query: 252 LSGKP 256 ++ P Sbjct: 235 VTDIP 239 >gi|171322906|ref|ZP_02911602.1| glutamate racemase [Burkholderia ambifaria MEX-5] gi|171091727|gb|EDT37266.1| glutamate racemase [Burkholderia ambifaria MEX-5] Length = 287 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 113/269 (42%), Gaps = 13/269 (4%) Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M + + P + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++ Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSHHAPYGPRDEA 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + + L + VIACNTA +R S+ +G P IK AAA + Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +G+ +L+T +TL L+ Y + L +E ++ Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRA 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +E D +VL CTHYP R L + +D SD+IAR+ +L Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDLVGDRLTIVDTSDAIARQLARVLDERG 234 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLM 264 TR F S + +R L Sbjct: 235 QRAPAGTRAAPPR--FCSTSDGLQLRALA 261 >gi|170703387|ref|ZP_02894167.1| glutamate racemase [Burkholderia ambifaria IOP40-10] gi|170131707|gb|EDT00255.1| glutamate racemase [Burkholderia ambifaria IOP40-10] Length = 287 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 112/276 (40%), Gaps = 12/276 (4%) Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M + + P + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++ Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSHHAPYGPRDEA 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + + L + VIACNTA +R S+ +G P IK AAA + Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +G+ +L+T +TL L+ Y + L +E ++ Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRT 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 +E D +VL CTHYP R + + +D SD+IAR+ +L Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLMIVDTSDAIARQLARVLDERG 234 Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 TR +G GL + Sbjct: 235 LRAPAGTRAAPP-RFCSTGDGRQLHALASTLLGLDA 269 >gi|254374574|ref|ZP_04990055.1| glutamate racemase [Francisella novicida GA99-3548] gi|151572293|gb|EDN37947.1| glutamate racemase [Francisella novicida GA99-3548] Length = 265 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL +++ + ++P IY D PYG ++K ++ Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + +IACNT + KD ++ ++ + + A + + +++TPAT+ Sbjct: 64 EQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH ++ + S +EE +I E K+ + K Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVELVAKEYLSY----FHDKNI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 +VL CTHYP+I ++ V +D S ++ LL T+ ++ + Sbjct: 177 QALVLGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234 Query: 252 LSGKP 256 ++ P Sbjct: 235 VTDIP 239 >gi|300814837|ref|ZP_07095071.1| glutamate racemase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511033|gb|EFK38299.1| glutamate racemase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 270 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN SI FDSG+GGL VL+ +P +IY D + PYG +++ Sbjct: 1 MDNR--------SIGFFDSGVGGLSVLKVSLGEIPRESYIYYGDTLRMPYGVRSKEDIER 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 K ++VIACNTA + R F F PA+K++ ++S Sbjct: 53 YTCQAMEFFRSK-NVKMAVIACNTATCYGIKKARELFDFPIFGVVEPAVKESLHKSKSKK 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +++L+T T+ SY S +I + L +E ++++ I I Sbjct: 112 VALLATEGTVNSGVYDKFFESYSSNIYIKEIGCPDLVLAIENG----DLRDEVIVPVINK 167 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLLPRINT 239 + E D ++L CTH+P++ + F+++ V +D ++ + L + Sbjct: 168 YLDKFEDFEYDTLILGCTHFPIVENTFKRILAKFDRKVQLVDPAEITINELKEYLENHDM 227 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQ 265 + ++S + L + Sbjct: 228 LGDHDEESIDFYVSSHKEKFKSTLEK 253 >gi|310642114|ref|YP_003946872.1| glutamate racemase 2 [Paenibacillus polymyxa SC2] gi|309247064|gb|ADO56631.1| Glutamate racemase 2 [Paenibacillus polymyxa SC2] Length = 262 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 9/241 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL ++P ++Y AD + PYG+ +KK ++ + + + Sbjct: 3 IGFFDSGIGGITVLHDTLKVLPNEDYMYYADTLNVPYGHKTKDEVKKYVLNAI-EFISQQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133 + VIACNTA + +E+R + S+ +G PA+K A ++ + + +T TLR Sbjct: 62 KVKAIVIACNTATSAAIEEIRGKY-SIPIIGMEPAVKPAVKSKKNIDKRVLVTATALTLR 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NLI ++ + L+ L E + + E + ++ + + + Sbjct: 121 EERLQNLITKLDNEHVVDLLPLPKLVQFAESF----EFNEQIVLPYLQEQLSIYDLSKYE 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTH+ +FR+L V+ +D ++ A+ + +L +N+ + + + S Sbjct: 177 TIVLGCTHFSYYKDIFRKLFSSDVNIIDGNNGTAKNLKKVLEEMNSL-DEGNGNISFYCS 235 Query: 254 G 254 G Sbjct: 236 G 236 >gi|124515180|gb|EAY56691.1| Glutamate racemase [Leptospirillum rubarum] Length = 314 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 7/262 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 E++ + I +FDSG+GGL VL+ P+ F Y+ D FPYG + + Sbjct: 5 ERRPEGGIALFDSGVGGLTVLRHFWETFPDRDFAYLGDMARFPYGTKSRETILRFARENV 64 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILS 127 L P L V AC T + + EL FP + +G + A + A T++G + +L+ Sbjct: 65 L-FLRTLHPSLIVAACFTVSSQVLPELSREFPDVPIVGMLEAGARAACRLTRTGSVGVLA 123 Query: 128 TPATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ +I ++ + + A VEE I E +K +E Sbjct: 124 TEGTISSQAYPAVIGEMTAHSVRVYGQACPLFAPMVEEGVTEGPIAELVARKYLEPFL-- 181 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + D I+L CTHYP + + P + ++D +A + + N Sbjct: 182 NVYREVDTIILGCTHYPPLRRTLEAILP-DIVFVDPGQELAEELKK-AGKTNGSSGNPLP 239 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 + +++ P+ +R G Sbjct: 240 ERHFYVTDSPERFVRIGENLLG 261 >gi|206603690|gb|EDZ40170.1| Glutamate racemase [Leptospirillum sp. Group II '5-way CG'] Length = 314 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 7/263 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 E + + I +FDSG+GGL VL+ P+ F Y+ D FPYG + + Sbjct: 4 AEPRSKGGIALFDSGVGGLTVLRHFWETFPDRDFAYLGDMARFPYGTKSRETILRFAREN 63 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126 + + P L V AC T + + EL FP + +G + A + A T++G + +L Sbjct: 64 VLFLQTLH-PSLIVAACFTVSSQVLPELSREFPDVPIVGVLEAGARAACRLTRTGSVGVL 122 Query: 127 STPATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 +T T+ +I ++ + + A VEE I E +K +E Sbjct: 123 ATEGTISSQAYPAVIGEMTAHAVRVYGQACPLFAPMVEEGVTEGPIAELVARKYLEPFLS 182 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 + D I+L CTHYP + + P V ++D +A + + N + Sbjct: 183 VY--REVDTIILGCTHYPPLRRTMEAILP-DVVFVDPGQELAEELKK-AGKTNGYSGNAL 238 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 + +++ P +R G Sbjct: 239 PERRFYVTDSPKRFVRIGENLLG 261 >gi|19704496|ref|NP_604058.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328142|ref|ZP_06870673.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|22001821|sp|Q8REE6|MURI_FUSNN RecName: Full=Glutamate racemase gi|19714772|gb|AAL95357.1| Glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154654|gb|EFG95440.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 264 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 12/245 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72 I IFDSG+GG VL+++ +P +IY D+ FPYG+ + L+K + + Sbjct: 6 QRIGIFDSGLGGTTVLKELINSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 K L ++ACNTA T D LR F S+ +G + A +K A+ T++ I+++ST T Sbjct: 66 -KNNCKLVIVACNTASTAAIDYLREKF-SLPIIGIIEAGVKIASKNTKNKNIAVISTKFT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 N S+ ++ ++ + A +E +KE+ ++ + K Sbjct: 124 AESHGYKNKAKMLDSELNVKEIACIEFAQMIETGWDTFDN-----RKELLNKYLSEIPKN 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250 D +VL CTHYPLI + + +D + I R L +N + Sbjct: 179 ADTLVLGCTHYPLIREDIEKNI--KIKVVDPAVEIVERTIQTLTSLNLLNDKKERGRIIF 236 Query: 251 FLSGK 255 F++G+ Sbjct: 237 FVTGE 241 >gi|85715176|ref|ZP_01046160.1| glutamate racemase [Nitrobacter sp. Nb-311A] gi|85698091|gb|EAQ35964.1| glutamate racemase [Nitrobacter sp. Nb-311A] Length = 280 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 99/269 (36%), Positives = 147/269 (54%), Gaps = 12/269 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + N P +IL+ DSG+GGL VL+K+ +P ++YVADD FPYG + + Sbjct: 1 MSNTP-------TILVVDSGLGGLTVLRKIVDALPAARYVYVADDAFFPYGRLSEEEIIA 53 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R++ L +++ + P + VIACNT + LR+ + S+ F+G VPAIK A A +++ Sbjct: 54 RVVPLVGELIGAHAPDIVVIACNTMSVSVLGPLRAAY-SIPFVGTVPAIKPACAASKTKR 112 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +S+L T AT++R YT LI + C + LV + LAS E+ G + + +I EI Sbjct: 113 VSVLGTRATVQREYTQALIRDHAQACTVTLVGAASLASLAEDALRGKTVSDADILSEIAP 172 Query: 183 CFIEKEGKR---TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 CF+ TD +VLACTHYPL++ +L+PWPV W+D + +IARR LL Sbjct: 173 CFVSAVDGGDLRTDAVVLACTHYPLLLDRLLKLAPWPVSWIDPAPAIARRVVDLLGSG-G 231 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 R +F SG+P L FG Sbjct: 232 GGDREAPPEMIFTSGRPHGLTDALAPFFG 260 >gi|208779829|ref|ZP_03247173.1| glutamate racemase [Francisella novicida FTG] gi|254373122|ref|ZP_04988611.1| glutamate racemase [Francisella tularensis subsp. novicida GA99-3549] gi|151570849|gb|EDN36503.1| glutamate racemase [Francisella novicida GA99-3549] gi|208744284|gb|EDZ90584.1| glutamate racemase [Francisella novicida FTG] Length = 265 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL +++ + ++P IY D PYG ++K ++ Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + +IACNT + KD ++ ++ + + A + + +++TPAT+ Sbjct: 64 EQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH ++ + S +EE +I E K+ + K Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVELVAKEYLSY----FHDKNI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 ++L CTHYP+I ++ V +D S ++ LL T+ ++ + Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234 Query: 252 LSGKP 256 ++ P Sbjct: 235 VTDIP 239 >gi|92117194|ref|YP_576923.1| glutamate racemase [Nitrobacter hamburgensis X14] gi|91800088|gb|ABE62463.1| glutamate racemase [Nitrobacter hamburgensis X14] Length = 265 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 98/258 (37%), Positives = 146/258 (56%), Gaps = 5/258 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +IL+ DSG+GGL VL+++ +P ++YVADD FPYG+ + + R++ L +++D Sbjct: 5 PTILVLDSGLGGLTVLREIVKALPGARYVYVADDAFFPYGHHSEDEIIARVVPLVGELID 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 Y P L+VIACNT + LR+ + S+ F+G VPAIK A A +++ +S+L T AT++ Sbjct: 65 TYTPDLAVIACNTMSVSVLGPLRAAY-SVPFVGTVPAIKPACAASKTKRVSVLGTRATVQ 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR-- 191 R YT LI + C + LV + LA E+ G + + +I EI CF+ Sbjct: 124 REYTQALIRDHARACTVTLVGAAHLARLAEDALRGKPVSDADIVSEIAPCFVPAADGGAL 183 Query: 192 -TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 TD +VLACTHYPL++ +L+PWPV W+D + +IARR LL R F + Sbjct: 184 RTDAVVLACTHYPLLLDRLLRLAPWPVAWIDPAPAIARRVVDLLG-PGDSGGREFPPEMI 242 Query: 251 FLSGKPDIAMRRLMQGFG 268 F SG+ L FG Sbjct: 243 FTSGRSRTLTDALAPFFG 260 >gi|284047416|ref|YP_003397755.1| glutamate racemase [Acidaminococcus fermentans DSM 20731] gi|283951637|gb|ADB46440.1| glutamate racemase [Acidaminococcus fermentans DSM 20731] Length = 264 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 98/251 (39%), Gaps = 6/251 (2%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I + DSG+GGL VL+ ++ MP FI++ D PYGN ++ + + L++ Sbjct: 6 PIGVIDSGVGGLTVLKWLQEKMPHERFIFIGDTARTPYGNRSREEIQGFVGE-MTAWLNR 64 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNT L D +++ + + +G T++ + L+T T+ Sbjct: 65 RNIKQLVVACNTITVLGTDVIKNGY-DFSVIGMKKGAHMVEGVTRNKKVGFLATDFTVAS 123 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I + + +E G + E+ I+ + + D Sbjct: 124 GAHKKEIQEMDPEIQVFGQGCPKFVPLIE----GEQFGSPELAAAIKEYTDKLKEYDVDT 179 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L+CTHYP + R+ V LD ++ + A L + ++ + + Sbjct: 180 VMLSCTHYPFVEKEIREAFGPGVTILDPAERTVQAAMEDLKQRRLNRETGLGRAEVCFTA 239 Query: 255 KPDIAMRRLMQ 265 + R + Sbjct: 240 DLERGKRLAAR 250 >gi|256372517|ref|YP_003110341.1| glutamate racemase [Acidimicrobium ferrooxidans DSM 10331] gi|256009101|gb|ACU54668.1| glutamate racemase [Acidimicrobium ferrooxidans DSM 10331] Length = 276 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 98/253 (38%), Gaps = 10/253 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++ I +FDSG GGL +L +R L+P +Y D PYG+ + + + + Sbjct: 2 AAERAHGPIGVFDSGFGGLNILAALRDLLPSEDLVYFGDSARSPYGSRPADEVVRFSLEI 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISIL 126 ++D+ L V+ CNTA + D LR+ ++ +G V A +AA SG + ++ Sbjct: 62 GRWLVDEAGSKLVVVGCNTASAVALDALRAEL-AVPVIGVVGAGARAARRCVGSGRVGVI 120 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + V+ L VE + ++ I Sbjct: 121 GTERTIASGAYQRALADDAGVA----VACPGLVEFVEAG----QTTGPAVRAVIADRLAP 172 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTHYP + + + V + ++ A L ++ Sbjct: 173 VVDAGVEVLLLGCTHYPYLAREIQAVVGEQVTLVSPAEEAAFEVAQRLGADGLARSGAVG 232 Query: 247 DHALFLSGKPDIA 259 + SG P + Sbjct: 233 SLRVACSGDPVVF 245 >gi|146294088|ref|YP_001184512.1| glutamate racemase [Shewanella putrefaciens CN-32] gi|145565778|gb|ABP76713.1| glutamate racemase [Shewanella putrefaciens CN-32] Length = 270 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 83/252 (32%), Positives = 131/252 (51%), Gaps = 2/252 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T Sbjct: 61 SSLTQPDIIVIACNTASTIALDLLRTEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Y LI ++ ++C + + S +L E+ G D + +EI+ F + + Sbjct: 120 VNSAYVKMLITNFATECKVLVEDSEVLVLASEQKLLGNGFDPDIVTQEIQRIFSKPDAFN 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250 TDV+VLACTH+PLI + P V +D+ +IA R LL + + Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQACSPILDPEITF 239 Query: 251 FLSGKPDIAMRR 262 + +G D + Sbjct: 240 YTTGNVDSEQAK 251 >gi|120610174|ref|YP_969852.1| glutamate racemase [Acidovorax citrulli AAC00-1] gi|120588638|gb|ABM32078.1| glutamate racemase [Acidovorax citrulli AAC00-1] Length = 296 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 104/270 (38%), Gaps = 11/270 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ +R +P F+Y+AD PYG D + R + + Sbjct: 6 QRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGNAPYGERGDAYVAARTHAIAGYLQ 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ACNTA E+R+ + +G PA+K A + T++G + ++ T TL Sbjct: 66 RTHGIKALVVACNTATAAAIHEVRARHADLPLVGVEPALKPALSLTRTGRVGVIGTRGTL 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEK-- 187 L S + LA +E + EI+ Sbjct: 126 SSAKFQRLRASLQGPVEFVVQPCDGLAHAIERSTADTLPDDPATAEIRALCARYMAALGP 185 Query: 188 ---EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 D +VL CTHY R + V ++ + +AR+ R LL Sbjct: 186 FGAAPGEIDTLVLGCTHYLFAEDALRAHTGPQVRLVETGEPVARQTRRLLEAAGALAAAT 245 Query: 245 FD---DHALFLSGKPDIAMRRLMQGFGLKS 271 +LF +G + + L + Sbjct: 246 VPATGTTSLFTTGALPLLQAAAHRWLQLPA 275 >gi|313904511|ref|ZP_07837887.1| glutamate racemase [Eubacterium cellulosolvens 6] gi|313470653|gb|EFR65979.1| glutamate racemase [Eubacterium cellulosolvens 6] Length = 269 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 8/238 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K ++ I +FDSG+GGL VL+++ +PE F+Y D PYG E +++ M + Sbjct: 9 KYKDYIGVFDSGVGGLSVLKELVKELPEEDFLYFGDSANAPYGEKEIGTIRELSMKIADR 68 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++ VIACNTA + E+R+ + M +G PA+K AA + + G I +++TP Sbjct: 69 MVA-DGVKTIVIACNTATSAAVKEIRAKYQERMPIIGIEPALKPAARWKRHGRILVMATP 127 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ATL+ +L H + V LASRVE+ + + +++ + Sbjct: 128 ATLKLEKYEDLSHRLEGEAEFIPVMCTGLASRVEKGKLEEEDLHELLEELLGPY-----R 182 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + D IVL CTHYP + R + + D + A L + + + D Sbjct: 183 GKVDGIVLGCTHYPFVKKQIRSVMG-DIPMFDGGEGTAHELHRQLEKHGLLKKKESGD 239 >gi|118497764|ref|YP_898814.1| glutamate racemase [Francisella tularensis subsp. novicida U112] gi|194323736|ref|ZP_03057512.1| glutamate racemase [Francisella tularensis subsp. novicida FTE] gi|118423670|gb|ABK90060.1| glutamate racemase [Francisella novicida U112] gi|194322100|gb|EDX19582.1| glutamate racemase [Francisella tularensis subsp. novicida FTE] Length = 265 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL +++ + ++P IY D PYG ++K ++ Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + +IACNT + KD ++ ++ + + A + + +++TPAT+ Sbjct: 64 EQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH ++ + S +EE +I E K+ + K Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVELVAKEYLSY----FHDKNI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 ++L CTHYP+I ++ V +D S ++ LL T+ ++ + Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYKFY 234 Query: 252 LSGKP 256 ++ P Sbjct: 235 VTDIP 239 >gi|313123221|ref|YP_004033480.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279784|gb|ADQ60503.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 261 Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 6/249 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++ I +FDSG GGL VL ++ LMP +++ D PYG + + + Sbjct: 2 SKEYADRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKKEVYQLAKRV 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++ Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP TL + + L+ + V + L +E+ + I + +E Sbjct: 121 TPLTLEQDKFNQLVAECAEPGQVLKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 GK +VL CTH+P +++ D + A + L + Sbjct: 177 VGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPG 235 Query: 248 HALFLSGKP 256 LF + P Sbjct: 236 QILFENSAP 244 >gi|260435366|ref|ZP_05789336.1| glutamate racemase [Synechococcus sp. WH 8109] gi|260413240|gb|EEX06536.1| glutamate racemase [Synechococcus sp. WH 8109] Length = 265 Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 17/258 (6%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 FDSG+GGL VL+++ +Y+ D PYGN + +++ + L Q Sbjct: 7 GFFDSGLGGLTVLRRVLERHGPVPCVYLGDTARVPYGNRQPDDIRRIAAEVVG-WLRNQQ 65 Query: 77 PVLSVIACNTAFTLIKDEL--RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNT L +D ++ P + +G AAA ++ + +L+TPAT+ Sbjct: 66 VSTVVMACNTTNALARDVAEGQAGVPLIGLIG------AAAAMVETRRVGVLATPATVAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + I + + + +E ++ D++++ + D Sbjct: 120 SAYRASIEALHPGSVVIEQACPAFVPLIEAG----EMNSDDLRRAAQAYLEPLLAASVDS 175 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD----DHAL 250 IVL CTHYPL+V + RQL P V +D + +AR+ +L + Sbjct: 176 IVLGCTHYPLLVPLLRQLVPESVQIIDPAIGVARQLDAILGPPAGISSAPRPFSLQSCRF 235 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++ PD R G Sbjct: 236 CVTADPDGFAVRATPWLG 253 >gi|167590293|ref|ZP_02382681.1| glutamate racemase [Burkholderia ubonensis Bu] Length = 277 Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 11/261 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +F+SG+GGL V++ +R +P +Y+AD PYG D ++ R +D L Sbjct: 10 APIGVFNSGLGGLSVVEAIRQRLPGEALLYIADSRYAPYGEKSDAFIRARS-QALTDWLV 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + + VIACNTA T LR+ F ++ +G P IK A + S ++ +L+T ATLR Sbjct: 69 QNSAKMLVIACNTATTHAIAHLRTQF-AIPIIGVEPGIKPAMQASASKVVGVLATAATLR 127 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L+ C + L R+E+ + I+ +E + D Sbjct: 128 SQRLRALLAENDHACRFVCQAGHGLVERIEQGEAAGSV----IESLLEAYLTPMIDEGAD 183 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL--- 250 +VL THY L++ R++ ++ + +IARR L H + L Sbjct: 184 TLVLGSTHYALLMPSIRRIFGSRFRLIETATAIARRVDHQLAEYRLHNDANPANAPLQLC 243 Query: 251 --FLSGKPDIAMRRLMQGFGL 269 S + + RL QG L Sbjct: 244 STATSAEQRAPLARLAQGLAL 264 >gi|325125275|gb|ADY84605.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 261 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 6/249 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++ I +FDSG GGL VL ++ L+P +++ D PYG + + + Sbjct: 2 SKEYADRPIGVFDSGQGGLTVLSRLVDLIPNEDYVFYGDSANAPYGVKSKEEVYQLAKRV 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++ Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TP TL + + L+ + V + L +E+ + I + +E Sbjct: 121 TPLTLEQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 GK +VL CTH+P +++ D + A + L + Sbjct: 177 VGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPG 235 Query: 248 HALFLSGKP 256 LF + P Sbjct: 236 QILFENSAP 244 >gi|294782801|ref|ZP_06748127.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA] gi|294481442|gb|EFG29217.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA] Length = 264 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 12/248 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFS 69 + I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++K + Sbjct: 3 DKRQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILD 62 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILST 128 + K L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST Sbjct: 63 FFV-KNNCKLVIVACNTASTAAIDYLRERFP-LPILGIVEAGIKIARKNTKTKNIAVIST 120 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T N ++ + ++ + +E +E+ + K + Sbjct: 121 KFTAESHGYKNKAKMIDTELIVKEIACIEFPMMIETGWETFDNREELLNKYLAE-----I 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 K D +VL CTHYPLI + + +D + I + + L ++ + Sbjct: 176 PKNVDTLVLGCTHYPLIRKDIENHT--NLKVVDPAVQIVDKVKQTLGSLDLLNDKKAKGK 233 Query: 249 A-LFLSGK 255 F++G+ Sbjct: 234 KIFFVTGE 241 >gi|56708260|ref|YP_170156.1| glutamate racemase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670731|ref|YP_667288.1| glutamate racemase [Francisella tularensis subsp. tularensis FSC198] gi|134302177|ref|YP_001122146.1| glutamate racemase [Francisella tularensis subsp. tularensis WY96-3418] gi|224457380|ref|ZP_03665853.1| glutamate racemase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370745|ref|ZP_04986750.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875080|ref|ZP_05247790.1| glutamate racemase [Francisella tularensis subsp. tularensis MA00-2987] gi|56604752|emb|CAG45830.1| glutamate racemase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321064|emb|CAL09213.1| glutamate racemase [Francisella tularensis subsp. tularensis FSC198] gi|134049954|gb|ABO47025.1| glutamate racemase [Francisella tularensis subsp. tularensis WY96-3418] gi|151568988|gb|EDN34642.1| hypothetical protein FTBG_00552 [Francisella tularensis subsp. tularensis FSC033] gi|254841079|gb|EET19515.1| glutamate racemase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159487|gb|ADA78878.1| glutamate racemase [Francisella tularensis subsp. tularensis NE061598] Length = 265 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL +++ + ++P IY D PYG ++K ++ Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D+ + +IACNT + KD ++ ++ + + A + + +++TPAT+ Sbjct: 64 DQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH ++ + S +EE I E K+ + K Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSY----FHDKNI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 ++L CTHYP+I ++ V +D S ++ LL T+ ++ + Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234 Query: 252 LSGKP 256 ++ P Sbjct: 235 VTDIP 239 >gi|254369138|ref|ZP_04985150.1| hypothetical protein FTAG_00072 [Francisella tularensis subsp. holarctica FSC022] gi|157122088|gb|EDO66228.1| hypothetical protein FTAG_00072 [Francisella tularensis subsp. holarctica FSC022] Length = 265 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL +++ + ++P IY D PYG ++K + ++ Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAVQTAKFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D+ + +IACNT + KD ++ ++ + + A + + +++TPAT+ Sbjct: 64 DQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH ++ + S +EE I E K+ + K Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSY----FHDKNI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 ++L CTHYP+I ++ V +D S ++ LL T+ ++ + Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234 Query: 252 LSGKP 256 ++ P Sbjct: 235 VTDIP 239 >gi|160872350|ref|ZP_02062482.1| glutamate racemase [Rickettsiella grylli] gi|159121149|gb|EDP46487.1| glutamate racemase [Rickettsiella grylli] Length = 271 Score = 254 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 9/246 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + L+P IY D P+G+ A++ + + D+L Sbjct: 5 SQPIGIFDSGMGGLTVAHAVTKLLPNESIIYFGDTAHAPWGDKSAAAIQAYSIKIC-DML 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAV-PAIKQAAAYTQSGLISILSTPA 130 K L +IACN+A + + ++ + + P I A Y I ++ T Sbjct: 64 IKQNCKLILIACNSASAVAYELVKEYLGHKRMVVDVIDPMIDHLARYYVDKTIGLIGTKQ 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + ++ +++ +L +EE I D IK E + Sbjct: 124 TINSNIYKKKLDELGINIQLNTLATPLLVPLIEEGFMDQTIMSDAIK----TYLKESSLR 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDH 248 D +VL CTHYPLI ++ +D++D +A + L T Sbjct: 180 NLDALVLGCTHYPLIKQQIKRFYGDSTTIVDSTDIVAEAVKSRLKERKLLAVSTNGGPKK 239 Query: 249 ALFLSG 254 ++S Sbjct: 240 RFYVSD 245 >gi|118594500|ref|ZP_01551847.1| glutamate racemase [Methylophilales bacterium HTCC2181] gi|118440278|gb|EAV46905.1| glutamate racemase [Methylophilales bacterium HTCC2181] Length = 267 Score = 254 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 5/223 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 SI +FDSG+GG+ VL+K++ +MP FIYVAD PYG ++KR + ++ Sbjct: 5 PSIGVFDSGVGGISVLEKLQQVMPSERFIYVADSKFAPYGQMTSQEIQKRAFIIIDFLIQ 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L V+ACNTA ELR + ++ +G PA+K A + I IL+T TL+ Sbjct: 65 HHSIKLIVVACNTATAACIHELRRNY-NLPIIGMEPAVKPAIFASTKKKIGILATEGTLK 123 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 T L+ +Y + ++ + L +E +I D K+ I + + D Sbjct: 124 STKFIALLENYEGEALFYVQPCIGLVELIERG----EISIDSTKRLIHSYLLPLKKNGVD 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 VIVL CTHY I + V +D ++A A L Sbjct: 180 VIVLGCTHYVFIKEIIEDYFSGTVTVIDTGLAVALHAERTLKE 222 >gi|304410374|ref|ZP_07391993.1| glutamate racemase [Shewanella baltica OS183] gi|307301915|ref|ZP_07581673.1| glutamate racemase [Shewanella baltica BA175] gi|304351783|gb|EFM16182.1| glutamate racemase [Shewanella baltica OS183] gi|306913953|gb|EFN44374.1| glutamate racemase [Shewanella baltica BA175] Length = 270 Score = 254 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 83/252 (32%), Positives = 129/252 (51%), Gaps = 2/252 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 QP + VIACNTA T+ D LR+ ++ +G VPAIK A + ++S ++ +L T T Sbjct: 61 SSLTQPNIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPATSLSKSKVVMVLGTHTT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + Y LI + ++C + + S L E+ G D + +EI+ F + + Sbjct: 120 VNSAYVKMLITDFATECKVLVEDSEALVLASEQKLLGKAFDPDIVTQEIQRIFNKPDAFD 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250 TDV+VLACTH+PLI + P V +D+ +IA R LL T + + Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQTCSPILDPEVTF 239 Query: 251 FLSGKPDIAMRR 262 + +G D + Sbjct: 240 YTTGNVDSEQAK 251 >gi|261856843|ref|YP_003264126.1| glutamate racemase [Halothiobacillus neapolitanus c2] gi|261837312|gb|ACX97079.1| glutamate racemase [Halothiobacillus neapolitanus c2] Length = 288 Score = 254 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 7/254 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I IFDSG+GGL V Q +R +P IY+AD PYG+ + +R + + + Sbjct: 13 PSAPIGIFDSGVGGLSVYQAVRHALPAEDIIYIADSGHAPYGDRSSDFITERAVAMTGFL 72 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + +ACNTA + +LR F S+ + PAIK A +++SG I +L+T T Sbjct: 73 VAAGAKAVV-VACNTATVIAVAQLRRQF-SIPIIALEPAIKPAIEHSRSGTIGVLATRKT 130 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + L + + + L +VE + I++ +E Sbjct: 131 IESPAVERLCRIHGANTRVLLQPCPGFVEQVERGEMEHPKTYELIRRYVEPLLA----SG 186 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDHAL 250 D +VL CTHY + R + V LD+S ++AR+ R + + Sbjct: 187 ADTLVLGCTHYVYLAQQIRAIVGPDVTILDSSAAVARQVGRRIGSSSVAASDGRITEDQF 246 Query: 251 FLSGKPDIAMRRLM 264 F + R +M Sbjct: 247 FTTAASTDHARTVM 260 >gi|300811367|ref|ZP_07091863.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497602|gb|EFK32628.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 261 Score = 254 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 6/249 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++ I +FDSG GGL VL ++ LMP +++ D PYG + + + Sbjct: 2 SKEYADRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRV 61 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 +++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++ Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T TL + + L+ + V + L +E+ + I + +E Sbjct: 121 TSLTLEQDKFNQLVAECAEPGQVAKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 GK +VL CTH+P +++ D + A + L + Sbjct: 177 AGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPG 235 Query: 248 HALFLSGKP 256 LF + P Sbjct: 236 QILFENSAP 244 >gi|238794886|ref|ZP_04638485.1| Glutamate racemase [Yersinia intermedia ATCC 29909] gi|238725761|gb|EEQ17316.1| Glutamate racemase [Yersinia intermedia ATCC 29909] Length = 241 Score = 254 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 121/236 (51%), Gaps = 4/236 (1%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 +P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T++ L Sbjct: 2 LPDLHYIYAFDNVAFPYGEKSGEFIIERVLEIVTAVQQRHPLAIVVIACNTASTVVLPAL 61 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S Sbjct: 62 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTRDLIERFATDCKIELLGS 120 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 L E G + + +KK + +E D IVL CTH+PL+V Q+ P Sbjct: 121 SELVELAESKLHGGAVPIETLKKILHPWLAMREP--PDTIVLGCTHFPLLVEELAQVLPE 178 Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLK 270 +D+ +IARR L+ + D+ A ++ D + ++Q +G Sbjct: 179 GTRMVDSGAAIARRTAWLISSQENVVSSQEDNIAYCMALNADTDVLLPVLQSYGFP 234 >gi|261854703|ref|YP_003261986.1| glutamate racemase [Halothiobacillus neapolitanus c2] gi|261835172|gb|ACX94939.1| glutamate racemase [Halothiobacillus neapolitanus c2] Length = 286 Score = 254 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 108/257 (42%), Gaps = 7/257 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + K I IFDSG+GGL V Q +R +P IY+AD PYG+ + +R + + Sbjct: 5 DTKPTAPIGIFDSGVGGLSVYQAVRHALPAEDIIYIADSGFAPYGDRSSDFITERAVAMT 64 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 ++ + V CNTA + +LR F S+ + PAIK A ++QSG I +L+T Sbjct: 65 DFLIAAGAKAVVVA-CNTATVIAVTQLRRQF-SIPIIALEPAIKPAIEHSQSGTIGVLAT 122 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ L ++ + L +VE D I++ +E Sbjct: 123 RKTIESPAVERLCRTHGVNTRVLLQPCPGFVEQVERGEMDHPDTTDLIRRYVEPLLA--- 179 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDD 247 D +VL CTHY + R + V LD+S ++AR+ R + T Sbjct: 180 -AGADTLVLGCTHYVYLAQQIRTIVGPDVSILDSSAAVARQVGRRIGSSEVAASTGRCGQ 238 Query: 248 HALFLSGKPDIAMRRLM 264 F + R +M Sbjct: 239 DQFFTTAASTDHARAVM 255 >gi|326387672|ref|ZP_08209278.1| glutamate racemase [Novosphingobium nitrogenifigens DSM 19370] gi|326207718|gb|EGD58529.1| glutamate racemase [Novosphingobium nitrogenifigens DSM 19370] Length = 285 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 88/247 (35%), Positives = 123/247 (49%), Gaps = 3/247 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL+FDSG+GGL VL KMR L+P+ IYVAD+ G PYG + + R+ L + + Sbjct: 26 QPILMFDSGVGGLSVLAKMRLLLPQAPVIYVADNAGLPYGQKTEAQIAARVSGLLGRMTE 85 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + P L IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R Sbjct: 86 RLHPRLVCIACNTASTIALASVREVL-EVPIVGTVPAIKPAAAMTKTGVIGLLGTEATIR 144 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + Y L + + + + L + E G + + + +G R D Sbjct: 145 QGYVDRLESEFAADKRLLRHGAPELVTAAEARLRGRDVDPAVFARAAQALRSMPDGDRID 204 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VLACTH+PLI Q V ++D SD IARR L R D ALF Sbjct: 205 TVVLACTHFPLIERDLAQAFGPDVRFIDGSDGIARRIAHLTQGQEFL--RKEPDLALFTR 262 Query: 254 GKPDIAM 260 PD+ Sbjct: 263 ADPDLPE 269 >gi|23016272|ref|ZP_00056030.1| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1] Length = 273 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 4/252 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 I IFDSG+GGL VL+ +R +P+ IY+ D PYG + + Sbjct: 4 NPNLPIGIFDSGVGGLTVLKAVRERLPDESLIYLGDTARLPYGTKSAQTVAAYALEATRA 63 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 ++ Y ++A NT+ + +R+ FP + +G V P AA + G I +++T Sbjct: 64 LVA-YGIKALLVADNTSSAHALEAVRAAFPGLPVIGVVEPGAAAAATASARGRIVVIATE 122 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 + ++ I + + + VEE I E + + F E Sbjct: 123 SAVQAGSYPRAILHSRPNALVTQLPCPLFVPMVEEGLVDGPIAEQIARHYLGPLFTGPEA 182 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTH+P + +FR+L V +D++ + A LL Sbjct: 183 A--DCLLLGCTHFPALAPLFRRLLGRDVAVVDSASTTAMVLEDLLSLRRLCNEGGPSRVR 240 Query: 250 LFLSGKPDIAMR 261 + P+ R Sbjct: 241 YLATDAPERFAR 252 >gi|262067163|ref|ZP_06026775.1| glutamate racemase [Fusobacterium periodonticum ATCC 33693] gi|291379121|gb|EFE86639.1| glutamate racemase [Fusobacterium periodonticum ATCC 33693] Length = 264 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 12/248 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFS 69 + I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++K + Sbjct: 3 DKRQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILD 62 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILST 128 + K L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST Sbjct: 63 FFV-KNNCKLVIVACNTASTAAIDYLREKFP-LPILGIVEAGIKIARKNTKTKNIAVIST 120 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T N ++ ++ ++ + +E +E+ + K + Sbjct: 121 KFTAESHGYKNKAKMIDTELNVKEIACVEFPMMIETGWETFDNREELLNKYLSE-----I 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 K D +VL CTHYPLI + + +D + I + + L + + Sbjct: 176 PKNVDTLVLGCTHYPLIRKDIEDRT--KLKVVDPAVQIVDKVKQTLGSLELLNDKKTKGK 233 Query: 249 A-LFLSGK 255 F++G+ Sbjct: 234 KIFFVTGE 241 >gi|237740114|ref|ZP_04570595.1| glutamate racemase [Fusobacterium sp. 2_1_31] gi|229422131|gb|EEO37178.1| glutamate racemase [Fusobacterium sp. 2_1_31] Length = 264 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 12/248 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFS 69 + I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++K + Sbjct: 3 DKRQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILD 62 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILST 128 + K L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST Sbjct: 63 FFV-KNNCKLVIVACNTASTAAIDYLREKFP-LPILGIVEAGIKIARKNTKTKNIAVIST 120 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T N ++ ++ ++ + +E +E+ + K + Sbjct: 121 KFTAESHGYKNKAKMIDTELNVKEIACVEFPMMIETGWDTFDNREELLNKYLAE-----I 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 K D +VL CTHYPLI + + +D + I + + L ++ + Sbjct: 176 PKNVDTLVLGCTHYPLIRKDIEDRT--KLKVVDPAVQIVDKVKQTLGSLDLLNDKKAKGK 233 Query: 249 A-LFLSGK 255 F++G+ Sbjct: 234 KIFFVTGE 241 >gi|308233557|ref|ZP_07664294.1| glutamate racemase [Atopobium vaginae DSM 15829] gi|328943355|ref|ZP_08240820.1| glutamate racemase [Atopobium vaginae DSM 15829] gi|327491324|gb|EGF23098.1| glutamate racemase [Atopobium vaginae DSM 15829] Length = 261 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 17/269 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + N Q I +FDSG+GG+ VL+K+ +P F Y D PYG + Sbjct: 1 MSNR------QGFIGVFDSGLGGISVLKKLVSQLPHEDFFYFGDTGHNPYGARSADDIFD 54 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + +++ K VIACNTA + +LR+ +P + +G PA+KQA Sbjct: 55 LSKAIVDNMVCKGA-KAVVIACNTATAVAAHKLRTMYPQLPLIGIEPALKQACDAHIYKH 113 Query: 123 ISILSTPATLRRTYTSNLIHSY----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 I +L+TP TLR L + I ++ LA R+E+ +++++ Sbjct: 114 ILVLATPVTLRMEKFHQLRDRMCACNSANVKISALACDGLAHRIEQGNLDAPDLDNDLRT 173 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + D +VL CTHYP + + PV + D + +A R +L + Sbjct: 174 ILAPYI-----GSVDAVVLGCTHYPFVKDRIVSILGNPVCF-DGAAGVAHHVRDVLQDRD 227 Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGF 267 ++ F + D L + F Sbjct: 228 LLNDQIERGCVTFATSAHDAHQLDLYEQF 256 >gi|282882426|ref|ZP_06291053.1| glutamate racemase [Peptoniphilus lacrimalis 315-B] gi|281297746|gb|EFA90215.1| glutamate racemase [Peptoniphilus lacrimalis 315-B] Length = 270 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN SI FDSG+GGL VL+ +P +IY D + PYG +++ Sbjct: 1 MDNR--------SIGFFDSGVGGLSVLKVSLGEIPRESYIYYGDTLRMPYGVKSKEDIER 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 K ++VIACNTA + R F F PA+K++ ++S Sbjct: 53 YTCQAMEFFRSK-NVKMAVIACNTATCYGIKKARELFDFPIFGVVEPAVKESLHKSKSKK 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +++L+T T+ SY S +I + L +E ++++ I I Sbjct: 112 VALLATEGTVNSGVYDKFFESYSSNIYIKEIGCPDLVLAIENG----DLRDEVIVPVINK 167 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLLPRINT 239 + E D ++L CTH+P++ + F+++ V +D ++ + L + Sbjct: 168 YLDKFEDFEYDALILGCTHFPIVENTFKRILAKFDRKVQLVDPAEITINELKEYLENHDM 227 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQ 265 + ++S + L + Sbjct: 228 LGDHDEESIDFYVSSHKEKFKSTLEK 253 >gi|300310872|ref|YP_003774964.1| glutamate racemase [Herbaspirillum seropedicae SmR1] gi|300073657|gb|ADJ63056.1| glutamate racemase protein [Herbaspirillum seropedicae SmR1] Length = 297 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 14/268 (5%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P +I IFDSGIGGL VL+ + +P +Y AD PYG+ + + +R + Sbjct: 21 PMPTAADAAIGIFDSGIGGLSVLRHIHAALPREQLLYFADSGYAPYGDKTEAQIVERSLA 80 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + S +L++ L V+ACNTA +R+ +P + +G P +K AA T+S + +L Sbjct: 81 IASFLLEQRVKAL-VVACNTATAAAIQAIRTRWPQLLVVGIEPGLKPAAQLTRSRTVGVL 139 Query: 127 STPATLRRTYTSNLIHSYVSQCHIH--LVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +T +TL + L +Q + + + L +E+ ++ + +E Sbjct: 140 ATRSTLASQRFALLQAQMQAQYQVRYLPQACVGLVDLIEKG----ELHSPATVQLLERYL 195 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + D +VL CTHYP + + L D +D ++ R+ + LL Sbjct: 196 APLLEQGADTLVLGCTHYPFVRPAIESVCKSLVGETPDIIDTGQAVTRQLQRLLEAGQLQ 255 Query: 241 QTRVFDDHALFLSGKP---DIAMRRLMQ 265 A F + + A R L++ Sbjct: 256 TGAASGSLAGFTTASRSTLENAFRGLLK 283 >gi|139438502|ref|ZP_01772018.1| Hypothetical protein COLAER_01010 [Collinsella aerofaciens ATCC 25986] gi|133776041|gb|EBA39861.1| Hypothetical protein COLAER_01010 [Collinsella aerofaciens ATCC 25986] Length = 294 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 96/267 (35%), Gaps = 15/267 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GGL V + + +P Y D PYG + ++ + L Sbjct: 12 RPIGVFDSGLGGLTVARAIATALPHESVYYFGDTKRCPYGTRTEDEVRSFALQ-AGRWLS 70 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 K+ + VIACNTA + + +G + P + A T++ + +L+T T+ Sbjct: 71 KHDVKIMVIACNTATAAALRLAQQVL-DVPVIGVIAPGARAAINSTRTRRVGVLATNLTI 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI------------KIKEDEIKKEI 180 R + I + ++ + VE ++ + Sbjct: 130 RSGAYTRAIQDLDAGVDVYGCPASSFVEVVEHELASGAHLQEQWLENEDIFDTPAVRALV 189 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + D +VL CTH+PL+V R V + +++ R +L R Sbjct: 190 GATVEPLRDRGIDTVVLGCTHFPLLVGPIRHALGPGVRVVSSAEETTRELTDILTRREQL 249 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267 + F + +IA + F Sbjct: 250 AGDAAEPQHRFATTSDNIAEFAVAGSF 276 >gi|148359847|ref|YP_001251054.1| glutamate racemase [Legionella pneumophila str. Corby] gi|296107897|ref|YP_003619598.1| glutamate racemase [Legionella pneumophila 2300/99 Alcoy] gi|148281620|gb|ABQ55708.1| glutamate racemase [Legionella pneumophila str. Corby] gi|295649799|gb|ADG25646.1| glutamate racemase [Legionella pneumophila 2300/99 Alcoy] Length = 272 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 10/257 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 +I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + Sbjct: 1 MNSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQM 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126 ++++ VIACNTA T L+S + L P A + T++ I++L Sbjct: 61 AKILVERR-IKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVL 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ +LI + + + + +L + EE + + +K ++ E Sbjct: 120 ATETTIASRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE 179 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RV 244 D ++L CTH+P+ + L P V +D++ + A LL N + V Sbjct: 180 ------DAVLLGCTHFPVFKPLLSSLLPKGVAIVDSAQATAISLYELLQNQNLYNDNLEV 233 Query: 245 FDDHALFLSGKPDIAMR 261 ++ + + Sbjct: 234 LPRINYLVTDSINRFQK 250 >gi|238020101|ref|ZP_04600527.1| hypothetical protein VEIDISOL_01982 [Veillonella dispar ATCC 17748] gi|237863625|gb|EEP64915.1| hypothetical protein VEIDISOL_01982 [Veillonella dispar ATCC 17748] Length = 267 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 7/250 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-YLACHIAEAL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K L VIACNT + D +R S+ +G +K A + ++S I I++T AT+ Sbjct: 65 EKQPVKLMVIACNTFTVVALDAVRERV-SVPVIGVSQGVKTAISQSKSKTIGIMATVATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ + + LA +E+ + + ++ + Sbjct: 124 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQG----HLDDHFVRDVCTEYLEPLLSREI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251 +V+VL CTH+P + + +L+ + ++D + + R L + + +L+ Sbjct: 180 EVVVLGCTHFPFVQPLLEELTSGRIQFIDPAFETSELVRRRLEGKDLFNPQKTAGTVSLY 239 Query: 252 LSGKPDIAMR 261 + ++ + Sbjct: 240 FTKDIELGDK 249 >gi|225175994|ref|ZP_03729986.1| glutamate racemase [Dethiobacter alkaliphilus AHT 1] gi|225168582|gb|EEG77384.1| glutamate racemase [Dethiobacter alkaliphilus AHT 1] Length = 267 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 10/258 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I FDSG GGL VL +P F+Y D PYG+ ++ + +++ Sbjct: 7 ADKPIGFFDSGAGGLTVLASAVKCLPNESFLYFGDTAHAPYGSRPVEDVRNLSVQ-AAEM 65 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + V+ACNTA + LR P + +G PA+K A A G + +++TP T Sbjct: 66 LCRQGCKALVVACNTATSAAVHVLREMLP-IPVIGMEPAVKPALAG--GGKVLVMATPLT 122 Query: 132 LRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 L+ L + ++ ++ L VE +++ + F + Sbjct: 123 LKEEKFKALCDRCGADESNVIVLPCPGLVEMVERGETEGP----AVERALAQLFAGADLT 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249 +VL CTHY + + P V ++D + ++ +L + + + + Sbjct: 179 GVSAVVLGCTHYLFLRRALAGILPADVKFVDGNLGTVKQLARILKKEGLLREEKTSQTNV 238 Query: 250 LFLSGKPDIAMRRLMQGF 267 LS + ++R + F Sbjct: 239 EILSSGGEASVRLFKELF 256 >gi|309388889|gb|ADO76769.1| glutamate racemase [Halanaerobium praevalens DSM 2228] Length = 277 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 114/265 (43%), Gaps = 8/265 (3%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + +I + DSG+GGL V ++ +P + +Y D + PYG ++ + + Sbjct: 1 MVENSKKAIGLLDSGVGGLTVAFEIFKFLPRENIVYFGDTLHLPYGPKSLSVVRTYVEKI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126 + ++++ + +IACNTA + D ++ F + G + A +A T+ I+++ Sbjct: 61 INYLIEEKKVKAIIIACNTATSAALDYVKDKF-EVPIFGMIKRAAFKAVTLTKKKKIAVI 119 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T++ I S ++ ++ + VE K E++K + Sbjct: 120 GTEGTIKSQVYQQAILSRNTEIEVYTRICPEFVTLVEAGI----FKGPEVRKIADFYLKP 175 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-- 244 + D ++LACTH+P + + L V ++ + + + L +N ++ Sbjct: 176 LKNYGVDTLILACTHFPYLTPIIADLMGAKVKLVNPASELVAELQNTLSNLNLLNSQNDN 235 Query: 245 FDDHALFLSGKPDIAMRRLMQGFGL 269 F H L +S K I+ + L G Sbjct: 236 FTQHQLLVSKKQKISTKFLQNGSSF 260 >gi|91216701|ref|ZP_01253666.1| glutamate racemase [Psychroflexus torquis ATCC 700755] gi|91185170|gb|EAS71548.1| glutamate racemase [Psychroflexus torquis ATCC 700755] Length = 262 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 126/256 (49%), Gaps = 7/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 ++ +++FDSG+GG +L+++ L+P + +Y+AD PYG + + +++ Sbjct: 3 KHPVVLFDSGVGGTSLLKEIIHLLPHENIVYLADSKNAPYGLRTSQDIIALSIKN-TELA 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + + V+ACNTA T LRS + S+ F+G PAIK AA +++ I +L+T TL Sbjct: 62 IQLKAKMIVVACNTATTNAISFLRSNY-SLPFIGIEPAIKPAALNSKAKRIGVLATKGTL 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 S+ ++ V + VE + + + ++I+ + Sbjct: 121 SSELFKQTSESFTEGVNVIEVIGKGIVEAVEGGWTNDERFINNLNQQIQ----PFIKEDI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251 D +VL CTH+P I+ R+L P V +D+ ++A++ + +L + T F D ++ Sbjct: 177 DYLVLGCTHFPYIIPKLRELLPKHVTLIDSGRAVAKQTKAILREKHLKNTDDSFGDINIY 236 Query: 252 LSGKPDIAMRRLMQGF 267 + ++ LM+ + Sbjct: 237 TNTVNSSHLQELMKDY 252 >gi|254785730|ref|YP_003073159.1| glutamate racemase [Teredinibacter turnerae T7901] gi|237683438|gb|ACR10702.1| glutamate racemase [Teredinibacter turnerae T7901] Length = 283 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 85/238 (35%), Positives = 126/238 (52%), Gaps = 3/238 (1%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + P IL+ DSG GGL V +++ P+ Y AD GFPYG D L + Sbjct: 1 MPVKPTLASKNARILVLDSGAGGLTVAREILHRNPDVSMDYFADIAGFPYGTMPDDVLIR 60 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 RL+ L + L + QP + V+ACNTA TL LR+ +P++ F+G VPAIK AA+ T++G+ Sbjct: 61 RLVSLVGNCLSQRQPDIVVLACNTASTLALRALRARYPTVEFVGVVPAIKPAASITRTGV 120 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 I +L+TPAT+ R YT LI + + S L E+ G K + +E+ Sbjct: 121 IGLLATPATVNRDYTRQLIEDFAGNHEVVTHGSNPLVVCAEQLLQGTKPDTGILIEELGK 180 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP--WPVDWLDNSDSIARRARCLLPRIN 238 + D IVLACTH+PL++ F + P + W+D+ +IA R LL ++ Sbjct: 181 LRTKSTAGSVDTIVLACTHFPLLLPYF-KALPSCESISWVDSGSAIANRVHHLLQKLG 237 >gi|54295149|ref|YP_127564.1| hypothetical protein lpl2229 [Legionella pneumophila str. Lens] gi|53754981|emb|CAH16469.1| hypothetical protein lpl2229 [Legionella pneumophila str. Lens] Length = 279 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 10/256 (3%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + Sbjct: 9 NSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMA 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILS 127 ++++ VIACNTA T L+S + L P A + T++ I++L+ Sbjct: 69 KILVERR-IKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ +LI + + + + +L + EE + + +K ++ E Sbjct: 128 TETTIASRAYHDLIIKNLPEAVVSTRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE- 186 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245 D ++L CTH+P+ + L P V +D++ + A LL N V Sbjct: 187 -----DAVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNLRNDNLEVP 241 Query: 246 DDHALFLSGKPDIAMR 261 ++ + + Sbjct: 242 PRINYLVTDSINRFQK 257 >gi|146329274|ref|YP_001208944.1| glutamate racemase [Dichelobacter nodosus VCS1703A] gi|146232744|gb|ABQ13722.1| glutamate racemase [Dichelobacter nodosus VCS1703A] Length = 264 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 11/255 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GG + + +P+ I+ AD+ PYG+ + + +L Sbjct: 3 NAPIGLFDSGVGGTSIWCAVCAELPQESTIFWADNAHAPYGDKSPAEIIELAARNTEQLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + +IACNTA LR+ + ++ F+ PAIK AA T++G + +L+T +TL Sbjct: 63 SRG-CKMIIIACNTASAHAAAILRTRY-NVPFVAVEPAIKPAALATKTGAVGVLATTSTL 120 Query: 133 RRTYTSNLIHSY-VSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 N + + +Q ++ L++ + +E +++ ++ + Sbjct: 121 MSAAFQNTVTRWVDTQKNVRLIARSGRGIVELIESG----QMESANMRALLAAHAQAFRA 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DH 248 + D +VL CTHYP + + ++L P V +D+ ++AR++R +L + + V H Sbjct: 177 EHIDQLVLGCTHYPYLRPLLQELLPA-VSIIDSGAAVARQSRRILAQWDLLNDGVMPARH 235 Query: 249 ALFLSGKPDIAMRRL 263 F + + + + + Sbjct: 236 QCFCTAESAVLSQFV 250 >gi|315226136|ref|ZP_07867924.1| glutamate racemase [Parascardovia denticolens DSM 10105] gi|315120268|gb|EFT83400.1| glutamate racemase [Parascardovia denticolens DSM 10105] Length = 282 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 8/256 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG+GG+ V++++R MP+ I+ D PYG + + L F +D L K Sbjct: 25 PIGVFDSGMGGISVVRQLRRDMPDQDIIFFGDSANAPYGTRPINEVTD-LSFAVADRLVK 83 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132 VIACNTA + LR + + +G PA+K A +S + + +T TL Sbjct: 84 QGVKAIVIACNTATSACAPLLRRHY-DIPIIGMEPALKVAIDRGQGKSQHVLVTATKLTL 142 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+ I L + VE G + + IE + Sbjct: 143 EGRKFAALMDRERGNNIIETQPCPDLVTLVEADDLG---DRELVLSTIERYLRPFDLDSL 199 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D IVL CTH+ FR++ P +D + +R + +L R + L Sbjct: 200 DSIVLGCTHFVFYRRYFREILPDYAAIIDGNQGTSRHVQEVLGYQGKSAERAAGKGTVIL 259 Query: 253 -SGKPDIAMRRLMQGF 267 + K D LMQ Sbjct: 260 QNSKTDPQTAALMQAL 275 >gi|303239730|ref|ZP_07326254.1| glutamate racemase [Acetivibrio cellulolyticus CD2] gi|302592667|gb|EFL62391.1| glutamate racemase [Acetivibrio cellulolyticus CD2] Length = 260 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 9/241 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL ++P +IY AD + PYG +KK + I+ K Sbjct: 3 IGFFDSGIGGITVLYDTLKVLPNEDYIYYADTLNVPYGPKPKDEVKKYIFSAIDFII-KQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133 + VIACNTA ++ +ELR+ + S+ +G PAIK A + + + + +T TL+ Sbjct: 62 EVKAVVIACNTATSVAIEELRNKY-SIPIVGMEPAIKPAVEKDRDANKRVLVTATALTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NLI ++ + L+ L E+ ++ E+ + ++ + + + Sbjct: 121 EEKLHNLIAKLDNEHVVDLLPLPGLVQFSEK----LEFNEEIVLPYLKEQLSKYDFNNYE 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTH+ +FR+L+ + +D + A + +L +N+ + S Sbjct: 177 TIVLGCTHFSYFKDMFRKLALSHIKVIDGNIGTANNLKRILKEMNSLN-EGNGSITFYNS 235 Query: 254 G 254 G Sbjct: 236 G 236 >gi|152980748|ref|YP_001352569.1| glutamate racemase [Janthinobacterium sp. Marseille] gi|151280825|gb|ABR89235.1| glutamate racemase [Janthinobacterium sp. Marseille] Length = 284 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 66/274 (24%), Positives = 115/274 (41%), Gaps = 12/274 (4%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M YP I IFDSG+G L VL+ ++ +P H + AD PYG D A+ Sbjct: 1 MSFSAYPDPVAADAPIGIFDSGVGALSVLRHIQARLPSEHLLCFADSGYAPYGGKSDAAI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + + K V+ACNTA + LR +P + +G P +K AA +++S Sbjct: 61 IERTLDIAAFLTTK-NIKAIVVACNTATAAAIEALRQHYPQLIIVGVEPGLKPAAVFSKS 119 Query: 121 GLISILSTPATLRRTYTSNLIHSY--VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 G +L+T +TL + L + + + L ++E+ ++ E Sbjct: 120 GKAGVLATASTLASSRFIALRDQISTSTGITFLTQACVGLVEQIEKG----ELDSTETIA 175 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRARCLL 234 +E D + L CTHYP + ++ S PV +D ++++R+ LL Sbjct: 176 MLERYVTPLLRGGADTLALGCTHYPFVQPAIEVIAQRESAVPVTIIDTGEAVSRQLERLL 235 Query: 235 PRINTHQ-TRVFDDHALFLSGKPDIAMRRLMQGF 267 + + F +G D + + Sbjct: 236 QQRGLQRFETTAGSLQAFTTGNRDALVAAFAKLL 269 >gi|282849105|ref|ZP_06258490.1| glutamate racemase [Veillonella parvula ATCC 17745] gi|282580809|gb|EFB86207.1| glutamate racemase [Veillonella parvula ATCC 17745] Length = 267 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 109/247 (44%), Gaps = 7/247 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-YLACRIAETL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K L VIACNT + D +R S+ +G +K A ++S I I++T AT+ Sbjct: 65 EKQPVKLMVIACNTFTVVALDAVRE-LVSVPVIGVSQGVKTAINKSKSKTIGIMATVATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ + + LA +E+ + + +++ + + Sbjct: 124 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQG----HLDDYFVREICKEYLEPLLSREI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251 +V+VL CTH+P + + +L+ + ++D + + R L N + L+ Sbjct: 180 EVVVLGCTHFPFVQPLLEELTSGRIRFIDPAFETSELVRHRLESKNLFNPQDTVGTVTLY 239 Query: 252 LSGKPDI 258 + ++ Sbjct: 240 FTKDVEL 246 >gi|269797494|ref|YP_003311394.1| glutamate racemase [Veillonella parvula DSM 2008] gi|269094123|gb|ACZ24114.1| glutamate racemase [Veillonella parvula DSM 2008] Length = 267 Score = 252 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 109/247 (44%), Gaps = 7/247 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-YLACRIAETL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K L VIACNT + D +R S+ +G +K A ++S I I++T AT+ Sbjct: 65 EKQPVKLMVIACNTFTVVALDAVRE-LVSVPVIGVSQGVKTAINKSKSKTIGIMATVATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ + + LA +E+ + + +++ + + Sbjct: 124 NSHIHKHVALEVDHEVFVWEQPCPELAGLIEQG----HLDDYFVREVCKDYLEPLLSREI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251 +V+VL CTH+P + + +L+ + ++D + + R L N + L+ Sbjct: 180 EVVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNHQDTVGTVTLY 239 Query: 252 LSGKPDI 258 + ++ Sbjct: 240 FTKDVEL 246 >gi|257463297|ref|ZP_05627695.1| glutamate racemase [Fusobacterium sp. D12] Length = 274 Score = 252 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 6/240 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL + ++P+ +FIY AD PYG + K ++ K Sbjct: 16 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADIDHVPYGTKTKEEIIKYSSEAVEFLVQKG 75 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA + ELR + ++ +G PA+K+A + + +++TP T++ Sbjct: 76 -VKAIVIACNTATSAAIQELREKY-TLPIIGMEPAVKKAIDFHPKKRVLVIATPMTIQGE 133 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NLI ++ + V+ L + +A +E+E+ + + + + Sbjct: 134 KLHNLIEKVDTEHLVDAVALPKLVT----FAEEENFEEEEVTEYLREALKHFNLENYSSV 189 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ +++ P V +LD ++ ++ L + + + SG+ Sbjct: 190 VLGCTHFNYFKDSLKKMLPKGVHFLDGNEGTIKKLISELEKRKALEKNSSRKIEYYYSGR 249 >gi|187931550|ref|YP_001891534.1| glutamate racemase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712459|gb|ACD30756.1| glutamate racemase [Francisella tularensis subsp. mediasiatica FSC147] Length = 265 Score = 252 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 100/243 (41%), Gaps = 10/243 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL +++ + ++P IY D PYG ++K ++ Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D+ + +IACNT + KD ++ ++ + + A + + +++TPAT+ Sbjct: 64 DQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +H ++ + S +EE I E K+ + K Sbjct: 121 NSNAYALQMHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSY----FHDKNI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 ++L CTHYP+I ++ V +D S ++ LL T+ ++ + Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234 Query: 252 LSG 254 ++ Sbjct: 235 VTD 237 >gi|317060877|ref|ZP_07925362.1| glutamate racemase [Fusobacterium sp. D12] gi|313686553|gb|EFS23388.1| glutamate racemase [Fusobacterium sp. D12] Length = 261 Score = 252 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 6/240 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL + ++P+ +FIY AD PYG + K ++ K Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADIDHVPYGTKTKEEIIKYSSEAVEFLVQKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA + ELR + ++ +G PA+K+A + + +++TP T++ Sbjct: 63 -VKAIVIACNTATSAAIQELREKY-TLPIIGMEPAVKKAIDFHPKKRVLVIATPMTIQGE 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NLI ++ + V+ L + +A +E+E+ + + + + Sbjct: 121 KLHNLIEKVDTEHLVDAVALPKLVT----FAEEENFEEEEVTEYLREALKHFNLENYSSV 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ +++ P V +LD ++ ++ L + + + SG+ Sbjct: 177 VLGCTHFNYFKDSLKKMLPKGVHFLDGNEGTIKKLISELEKRKALEKNSSRKIEYYYSGR 236 >gi|162453120|ref|YP_001615487.1| glutamate racemase [Sorangium cellulosum 'So ce 56'] gi|161163702|emb|CAN95007.1| glutamate racemase [Sorangium cellulosum 'So ce 56'] Length = 309 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 104/262 (39%), Gaps = 12/262 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +FDSG+GGL V++ +R P +Y+ D PYG + + + ++ Sbjct: 6 DAPLGVFDSGLGGLTVVRALRRRCPAEDIVYLGDTARVPYGTRSPETVVRYALGCARVLI 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 + V+ACNT + D LR + LG + P + A A ++ I +L T T Sbjct: 66 GRG-VKAIVVACNTVSAVAIDMLRVEL-DLPVLGVILPGARAAVAASRGATIGVLGTAGT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + S ++ + ++ +L S EE ++ ++ +E G Sbjct: 124 IASGAYPRAVASLSTRTEVAGQAAPLLVSLAEEGWLEGEVPRLVARRYLE----PLIGAG 179 Query: 192 TDVIVLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246 IVL CTH+PL+ L+ P+ +D++ + A L +R Sbjct: 180 ARSIVLGCTHFPLLRAAIEAETASLAGGPLPIVDSASATAEEVASFLAERGLATSRSTPG 239 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 +L ++ P + G Sbjct: 240 GLSLLVTDLPKSFATVAARFLG 261 >gi|196229452|ref|ZP_03128317.1| glutamate racemase [Chthoniobacter flavus Ellin428] gi|196226684|gb|EDY21189.1| glutamate racemase [Chthoniobacter flavus Ellin428] Length = 295 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 12/272 (4%) Query: 1 MKIDNYP-CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59 M D +P + + ++DSG GGL VL+++R +PE +IY+ D PYG + Sbjct: 1 MPADFFPNASSPISCPVGVYDSGYGGLTVLRQLRRTLPELDYIYLGDSGRAPYGGRDVDT 60 Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS--MAFLGA-VPAIKQAAA 116 + + + + V+AC+T + L+ + S LG +PA + A Sbjct: 61 ILDFAEQCVERLFAEG-CRVVVVACHTVSCVALRHLQHRYGSAERRILGVTIPAAEAAVN 119 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T+ G I + T T+ + ++ + V + +LA VEE +I + Sbjct: 120 RTR-GHIGFVGTARTVASHTFRTEVRKLNAEVKVTEVPAPLLAPIVEEGWEDTEIARLAV 178 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 ++ + D +VL CTHYPL+ F++L+P PV L+ + +A R R R Sbjct: 179 QRYLA------MFDGVDTLVLGCTHYPLLEREFQELTPAPVQVLNPAPEVAERFRAWRER 232 Query: 237 INTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 SG + + G Sbjct: 233 HPGFAPAGSGRLRFLSSGDAARFAKHGARFLG 264 >gi|299529106|ref|ZP_07042554.1| glutamate racemase [Comamonas testosteroni S44] gi|298722862|gb|EFI63771.1| glutamate racemase [Comamonas testosteroni S44] Length = 284 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 18/262 (6%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDILDKYQPVLSV 81 +GGL VLQ +R +P F+Y+AD PYG+ D +++R + + +L+++ + V Sbjct: 1 MGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAIAKYLLEQHDIKILV 60 Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 IACNTA + LR P + +G PAIK A+ +Q+ + +++T T+ + L+ Sbjct: 61 IACNTATAAAVELLRERLPQLPVIGVEPAIKPASFSSQTHHVGVMATRGTISSQRVARLV 120 Query: 142 HSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIE-----KEGKRTD 193 + + HL + LA +E E A EI+ + + D Sbjct: 121 SEHGQRAEFHLQACDGLARAIEQSTEQALPEDASATEIRALCAKYTSALGSFGLKTGQMD 180 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--------F 245 +VL CTHY + R L + LD +AR+ R +L + N Sbjct: 181 TLVLGCTHYVFVKDDLRALLGPDIQLLDTGAPVARQTRRMLEQRNLLGAETDGSLQLAQA 240 Query: 246 DDHALFLSGKPDIAMRRLMQGF 267 D L +G+ AM+ Q + Sbjct: 241 DQIQLMTTGRL-TAMQAAAQRW 261 >gi|326202256|ref|ZP_08192125.1| glutamate racemase [Clostridium papyrosolvens DSM 2782] gi|325987374|gb|EGD48201.1| glutamate racemase [Clostridium papyrosolvens DSM 2782] Length = 258 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 6/237 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I DSG GG+ VL + +P+ ++IY AD PYG +++ + ++ K Sbjct: 6 IGFLDSGFGGITVLSEALRQLPQENYIYYADIEHVPYGTKTKEEVREYVFRAVEFLV-KQ 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ ELR + LG PA+K A + +L+T TLR Sbjct: 65 GIKALVVACNTATSIAVRELRGMY-DFPILGMEPAVKPAVRNGNGKRVLVLATALTLREE 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NL+ + + + L E + D I I+ + Sbjct: 124 KFHNLVQRVDQEHVVDYLPFPELVEMAE----NMIFDYDSIVPVIKSKLEGFNLENYKTF 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 VL CTH+P+ F+++ P VD +D S+ R + LL T +F Sbjct: 180 VLGCTHFPIYRDAFKKVLPSFVDIIDGSEGTIRYLKRLLEERQLISTNADGGKVVFF 236 >gi|291458619|ref|ZP_06598009.1| glutamate racemase [Oribacterium sp. oral taxon 078 str. F0262] gi|291419152|gb|EFE92871.1| glutamate racemase [Oribacterium sp. oral taxon 078 str. F0262] Length = 279 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 6/261 (2%) Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 E+ + I IFDSG+GG+ V++ ++ +P I+ D PYG ++ L Sbjct: 12 RKAEEIRRAPIGIFDSGVGGISVVKALKRELPGEDLIFFGDSKNAPYGEKSVEEIRA-LS 70 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLI 123 L + VIACNTA + + LR P +G PA+K A + I Sbjct: 71 ERSYQFLRGQRVKAVVIACNTATSAAAELLREENPGEIIVGMEPALKPAIENAGRERPEI 130 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T +TL L +H + + + VE +++ + Sbjct: 131 LVLATSSTLGGERFHKLAARLGMGARVHSLPAPEIVRMVEAGREDSDEMRSYLRELLRPY 190 Query: 184 FIEKEGK---RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 +G D +VL CTH+P R++ +PV D ++ AR + L + Sbjct: 191 RRMADGTIRCPLDGLVLGCTHFPFAKRAIREVLSYPVPIYDGAEGTARETKHRLLQKALL 250 Query: 241 QTRVFDDHALFLSGKPDIAMR 261 R S PD + Sbjct: 251 SDRKSGGCVRLYSSLPDTELE 271 >gi|294786553|ref|ZP_06751807.1| glutamate racemase [Parascardovia denticolens F0305] gi|294485386|gb|EFG33020.1| glutamate racemase [Parascardovia denticolens F0305] Length = 273 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 8/256 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG+GG+ V++++R MP+ I+ D PYG + + L F +D L K Sbjct: 16 PIGVFDSGMGGISVVRQLRRDMPDQDIIFFGDSANAPYGTRPINEVTD-LSFAVADRLVK 74 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132 VIACNTA + LR + + +G PA+K A +S + + +T TL Sbjct: 75 QGVKAIVIACNTATSACAPLLRRHY-DIPIIGMEPALKVAIDRGQGKSQHVLVTATKLTL 133 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+ I L + VE G + + IE + Sbjct: 134 EGRKFAALMDRERGNNIIETQPCPDLVTLVEADDLG---DRELVLSTIERYLRPFDLDSL 190 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D IVL CTH+ FR++ P +D + +R + +L R + L Sbjct: 191 DSIVLGCTHFVFYRRYFREILPDYAAIIDGNQGTSRHVQEVLGYQGKSAERAAGKGTVIL 250 Query: 253 -SGKPDIAMRRLMQGF 267 + K D LMQ Sbjct: 251 QNSKTDPQTAALMQAL 266 >gi|269123416|ref|YP_003305993.1| glutamate racemase [Streptobacillus moniliformis DSM 12112] gi|268314742|gb|ACZ01116.1| glutamate racemase [Streptobacillus moniliformis DSM 12112] Length = 256 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 13/258 (5%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI IFDSG+GG+ VL ++R P+ + D PYG + K + +L K Sbjct: 2 SIGIFDSGMGGITVLNEIRKQYPKLDIHFFGDTARLPYGEKSKEEIIKYSTEIVEFLLTK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + L V+ACNTA +L DE++ + ++ +G + A +S + +++T AT+ Sbjct: 62 -EVELIVVACNTATSLALDEIKEKY-NINIIGVIEAGVNGVINNKSKNVGLIATTATVNS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + ++ SQ I + +L +E + I + + K D Sbjct: 120 KKYTQSLNFVNSQIKIIERACPLLVPTIENGNINGAYINELINEYVNH-----MSKEIDT 174 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF-LS 253 ++L CTHY ++ + L ++ +D S I + ++ N + + + F +S Sbjct: 175 LILGCTHYSILKETIKSLY-SNINIIDPSVEIVK----IINNNNLIKCKDENSKTFFYVS 229 Query: 254 GKPDIAMRRLMQGFGLKS 271 G L F ++S Sbjct: 230 GSKLQFENNLKNIFSIES 247 >gi|255037214|ref|YP_003087835.1| glutamate racemase [Dyadobacter fermentans DSM 18053] gi|254949970|gb|ACT94670.1| glutamate racemase [Dyadobacter fermentans DSM 18053] Length = 269 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 7/244 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSGIGG+ V + L+P+ + IY D PYG+ A++ + + + +L Sbjct: 5 SAPIGIFDSGIGGMTVASAVTKLLPQENTIYFGDTAHLPYGDKSTAAIQAYSIKICNMLL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAV-PAIKQAAAYTQSGLISILSTPA 130 + L +IACN+A + +R S A L + P + + + I ++ T Sbjct: 65 -QQNCKLILIACNSASAAAYELVREYVGSKAKVLNVIDPVVDYVKEHYEGKTIGLIGTKQ 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + H+ +++ +LA +EE I E I + Sbjct: 124 TVLSNVYKKKVDALDRNIHLKSLATPLLAPMIEEGFFDNNISE----SVIANYLSDASLD 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 + ++L CTHYPLI R+ ++ LD S+ +AR + L + + Sbjct: 180 GIEALILGCTHYPLIKTQIRKFYGEAIETLDTSEIVARSLKAWLEQHYLINEKGEGKRQF 239 Query: 251 FLSG 254 ++S Sbjct: 240 YVSD 243 >gi|303233055|ref|ZP_07319730.1| glutamate racemase [Atopobium vaginae PB189-T1-4] gi|302480830|gb|EFL43915.1| glutamate racemase [Atopobium vaginae PB189-T1-4] Length = 261 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 116/258 (44%), Gaps = 10/258 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GG+ VL+++ LMP +F+Y+ D PYG+ + R + +++L Sbjct: 5 RAPIGVFDSGVGGISVLKRLVELMPHENFVYMGDSAYNPYGSKTKQQIIDRSCTIVNELL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + VIACNTA + D LR FP + +G PA+K A + ++ + +L+TPATL Sbjct: 65 A-HSIKALVIACNTATSAASDYLRVQFPELPIIGIEPALKAALDHPKTMPVLVLATPATL 123 Query: 133 RRTYTSNLIHSYVSQ---CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 L H Q ++ + LA R+E+ + D++ +++ E G Sbjct: 124 TLEKYQELEHKLGVQRNTSQVYRLGCKGLAHRIEQG----NLNADDLMQDLHTLLDEYRG 179 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 + +VL CTHYP + + V D + AR +L Sbjct: 180 V-VNSVVLGCTHYPFVKQHICDILG-DVPCYDGAIGTARHCLSVLSARGLLNPSEDAGTI 237 Query: 250 LFLSGKPDIAMRRLMQGF 267 FLS P A Q F Sbjct: 238 EFLSSTPGAAQIAFYQSF 255 >gi|224282549|ref|ZP_03645871.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171] gi|310287011|ref|YP_003938269.1| glutamate racemase [Bifidobacterium bifidum S17] gi|311063884|ref|YP_003970609.1| glutamate racemase MurI [Bifidobacterium bifidum PRL2010] gi|313139703|ref|ZP_07801896.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171] gi|309250947|gb|ADO52695.1| glutamate racemase [Bifidobacterium bifidum S17] gi|310866203|gb|ADP35572.1| MurI Glutamate racemase [Bifidobacterium bifidum PRL2010] gi|313132213|gb|EFR49830.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171] Length = 269 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 99/267 (37%), Gaps = 18/267 (6%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ V++++ MP +Y D PYG +++ + + Sbjct: 5 APIGVFDSGLGGISVVRQIVQDMPHERVLYFGDSANAPYGTKTPQEVRRLSFDIMERFMS 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS------------- 120 + VIACNTA + + LR + + +G PA+K A + Sbjct: 65 QG-VKAVVIACNTATSAAVNALRDHY-DIPIIGMEPALKVACDRGDTAAGDGPAPARHMP 122 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + + +TP TLR + L+ + + I L VE G D + + + Sbjct: 123 QHVIVAATPLTLREHKFAALMDRFKANNMISPQPCPDLVEIVES---GRLCDHDLVMRTL 179 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 F + D +VL CTH+ FR+L P +D + R +L + Sbjct: 180 HRYFDGYDLPSIDSVVLGCTHFVFYRDYFRELLPSTTAIIDGNRGTVRHLGMVLESLGKL 239 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267 D + + L + Sbjct: 240 APEEMDGGVEIANSDSGERIAALSREL 266 >gi|154501141|ref|ZP_02039179.1| hypothetical protein BACCAP_04830 [Bacteroides capillosus ATCC 29799] gi|150269833|gb|EDM97368.1| hypothetical protein BACCAP_04830 [Bacteroides capillosus ATCC 29799] Length = 259 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 5/230 (2%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL ++++ LMPE +Y D PYG+ + K + L+ + VI Sbjct: 1 MGGLTAVRELIHLMPEEDIVYFGDTGRVPYGSRSRDTIIKYARQDVA-FLNTFDLKAVVI 59 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 AC T T + L P + LG V PA+ +A A T+SG I ++ T AT+R I Sbjct: 60 ACGTVSTTALEVLEQENP-IPVLGVVRPAVAEAVAATRSGKIGLIGTQATIRTGAYEKYI 118 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + + + + VE K E+ E + D +VL CTH Sbjct: 119 AKLLPDAQVTARACPLFVPLVENGRFRPGDKVAEM--VAEEYLTPLKEAGVDTLVLGCTH 176 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 YPL+ V V ++ + AR+ +L + + + + Sbjct: 177 YPLLSQVIGNFMGPDVKLINTGAACARQVAAMLKKRDGLNSPDHVGTRRY 226 >gi|299143433|ref|ZP_07036513.1| glutamate racemase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517918|gb|EFI41657.1| glutamate racemase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 278 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 102/262 (38%), Gaps = 15/262 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I +FDSGIGGL VL++ ++ + FIY D PYG ++K F Sbjct: 1 MRDSDRPIGVFDSGIGGLSVLKEAINILTDEKFIYFGDTARIPYGIRTPEEIEKFTEESF 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 + L K +IACNTA + + F +G V P+ + T++ +++L+ Sbjct: 61 -EFLKKQGVKAGIIACNTATCYGLETVSKRF-DFPIIGVVTPSCEAVHKITENKNVALLA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + V L +E I ++ ++K IE E Sbjct: 119 TQGTVNSKVYDEHFFDIDPFVDLRSVGCPDLVVAIENG----HIDDEYVEKIIEKYLNEI 174 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSDSIARRARCLLPRI-----NT 239 D ++L CTH+P ++ V+ +D + + A + +L + N Sbjct: 175 NEFDYDTLILGCTHFPHARKAIERVLNKSNRKVNLVDPARTTALDLKAILEKEGLLKGNC 234 Query: 240 HQTRVFDDHALFLSGKPDIAMR 261 ++ + + + + Sbjct: 235 LESENDSKIVFYTTANIEKFKK 256 >gi|332978147|gb|EGK14883.1| glutamate racemase [Desmospora sp. 8437] Length = 206 Score = 251 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 7/206 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++I I DSG+GGL V++++ +P +Y D + PYG +++ + + Sbjct: 7 ADSAIGILDSGVGGLTVVREVFRQLPNEKILYFGDTLRCPYGPRSSDEVRRFTLEIVRH- 65 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L Y VIACNTA L +E+R + LG + P + A ++ G + ++ T Sbjct: 66 LSGYPLKALVIACNTATALALEEVRHQV-DVPVLGVIEPGARAAIKVSRRGRVGVIGTEG 124 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R + + + ++ + L VE ++ +E +K + + Sbjct: 125 TIRSSAYERALKRIDPRLYVVSLPCPALVPLVESG----GVENEESRKILRESLAPLKSH 180 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWP 216 R + ++L CTHYPLI + + Sbjct: 181 RLESLILGCTHYPLIASMISREMGPG 206 >gi|294792937|ref|ZP_06758083.1| glutamate racemase [Veillonella sp. 6_1_27] gi|294455882|gb|EFG24246.1| glutamate racemase [Veillonella sp. 6_1_27] Length = 272 Score = 251 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 108/247 (43%), Gaps = 7/247 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 11 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-YLACRIAETL 69 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L VIACNT + D +R S+ +G +K A ++S I I++T AT+ Sbjct: 70 ERQPVKLMVIACNTFTVVALDAVRE-LVSVPVIGVSQGVKTAINKSKSKTIGIMATVATV 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ + + LA +E+ + + +++ + + Sbjct: 129 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQG----HLDDYFVREVCKEYLEPLLSREI 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251 +V+VL CTH+P + + +L+ + ++D + + R L N + L Sbjct: 185 EVVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNPQDTVGTVTLC 244 Query: 252 LSGKPDI 258 + ++ Sbjct: 245 FTKDVEL 251 >gi|307776633|pdb|3OUT|A Chain A, Crystal Structure Of Glutamate Racemase From Francisella Tularensis Subsp. Tularensis Schu S4 In Complex With D-Glutamate. gi|307776634|pdb|3OUT|B Chain B, Crystal Structure Of Glutamate Racemase From Francisella Tularensis Subsp. Tularensis Schu S4 In Complex With D-Glutamate. gi|307776635|pdb|3OUT|C Chain C, Crystal Structure Of Glutamate Racemase From Francisella Tularensis Subsp. Tularensis Schu S4 In Complex With D-Glutamate Length = 268 Score = 251 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL +++ + ++P IY D PYG ++K ++ Sbjct: 7 NRPIGVFDSGIGGLTIVKNLXSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D+ + +IACNT + KD ++ ++ + + A + + +++TPAT+ Sbjct: 67 DQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH ++ + S +EE I E K+ + K Sbjct: 124 NSNAYALQIHKKNPNIEVYSNPCGLFVSXIEEGFVSGHIVELVAKEYLSY----FHDKNI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251 ++L CTHYP+I ++ V +D S ++ LL T+ ++ + Sbjct: 180 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKXLYSLLFENKLLNTTKSNPEYRFY 237 Query: 252 LSGKP 256 ++ P Sbjct: 238 VTDIP 242 >gi|289163917|ref|YP_003454055.1| glutamate racemase [Legionella longbeachae NSW150] gi|288857090|emb|CBJ10905.1| putative glutamate racemase [Legionella longbeachae NSW150] Length = 273 Score = 251 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 10/251 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I +FDSG+GGL VL+ +R +P+ F+Y+ D PYG +K+ M + ++ Sbjct: 7 QLAIGVFDSGMGGLTVLRALREGLPQESFVYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 66 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPAT 131 ++ VIACNTA T L+S P M L P A A T++ + +L+T T Sbjct: 67 ERR-IKALVIACNTATTAALPYLQSMLPDMPVLGVVAPGAAAAVAATKNNHVIVLATETT 125 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + LI + + I+ + +L + EE ++ + +K ++ E Sbjct: 126 IASNAYQQLIAQQLPRAVINTRACSVLVALAEEGMINNQVAREALKYYLDDFTHE----- 180 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHA 249 D ++L CTH+P+ + + P V +D++ + A LL + + ++ Sbjct: 181 -DTVLLGCTHFPVFKSLLISILPEGVSIVDSAHATAIALYRLLEKQDLLNDVPSLYRRVT 239 Query: 250 LFLSGKPDIAM 260 ++ Sbjct: 240 YLVTDSIKRFQ 250 >gi|313675673|ref|YP_004053669.1| glutamate racemase [Marivirga tractuosa DSM 4126] gi|312942371|gb|ADR21561.1| glutamate racemase [Marivirga tractuosa DSM 4126] Length = 270 Score = 251 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 7/249 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K I IFDSGIGGL V K++ LMP +Y D PYG+ A++ + Sbjct: 1 MTKDNSAPIGIFDSGIGGLTVAHKVKELMPNESMVYFGDIAHLPYGDKSAAAIQAYSIK- 59 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS--MAFLGAVPAIKQAAAYTQSGLISI 125 +D+L + L +IACN+A + + +R S F P ++ + + + + Sbjct: 60 VTDVLLQQGCKLILIACNSASSAAFELVREYVGSKAKVFNVIDPVVEHVSQHYNKQKVGL 119 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 + T T+ + + + +++ +L +EE +I D IE Sbjct: 120 IGTKQTVNSNAYESRLKQLNPDIELKSLATPLLVPMIEEGFFENRISHD----IIEAYLH 175 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 ++ + + ++L CTHYPLI + + VD LD++ +A+R + L Sbjct: 176 DEALEEIEALILGCTHYPLIKNEIDKFYGGKVDILDSATIVAKRLQQFLKEHTLLSENKI 235 Query: 246 DDHALFLSG 254 +S Sbjct: 236 RKDRFLVSD 244 >gi|154174379|ref|YP_001408311.1| glutamate racemase [Campylobacter curvus 525.92] gi|166231030|sp|A7GYL9|MURI_CAMC5 RecName: Full=Glutamate racemase gi|112803185|gb|EAU00529.1| glutamate racemase [Campylobacter curvus 525.92] Length = 266 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 12/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL + +P F+Y AD PYG + K ++D+ Sbjct: 3 IGIFDSGLGGLSVLNEALKKLPNEEFLYYADRKNVPYGLKSKDEILKFSSHAVKFLIDQG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG------LISILSTP 129 VIACNTA + +ELR+ F + +G PA+K+AA + G +++TP Sbjct: 63 A-NAIVIACNTATSAAINELRAKF-DLPIIGMEPAVKKAADLNREGENSASLRTLVIATP 120 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ LI S+ + +++ L E DE+K+ + F + + Sbjct: 121 LTVQGAKLKELIERVDSEHLVDVLALPRLVEFAE----NENFACDEVKEYLREEFAKFKL 176 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 + +VL CTH+ R++ P V +D ++ + L R+N + Sbjct: 177 QNYCALVLGCTHFNYFKDSLREILPAGVSLIDGNEGTINKLISELSRLNLAHGKGQSVEY 236 Query: 250 LF 251 + Sbjct: 237 FY 238 >gi|294795084|ref|ZP_06760219.1| glutamate racemase [Veillonella sp. 3_1_44] gi|294454446|gb|EFG22820.1| glutamate racemase [Veillonella sp. 3_1_44] Length = 272 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 7/247 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L Sbjct: 11 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-YLACRIAETL 69 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K L VIACNT + D +R S+ +G +K A ++S I I++T AT+ Sbjct: 70 EKQPVKLMVIACNTFTVVALDAVRE-LVSVPVIGVSQGVKTAINKSKSKTIGIMATVATV 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ + + LA +E+ + + +++ + + Sbjct: 129 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQG----HLDDYFVREVCKDYLEPLLSREI 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251 +V+VL CTH+P + + +L+ + ++D + + R L N + L Sbjct: 185 EVVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNPQDTVGTVTLC 244 Query: 252 LSGKPDI 258 + ++ Sbjct: 245 FTKDVEL 251 >gi|148652096|ref|YP_001279189.1| glutamate racemase [Psychrobacter sp. PRwf-1] gi|148571180|gb|ABQ93239.1| glutamate racemase [Psychrobacter sp. PRwf-1] Length = 340 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 14/269 (5%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P I IFDSG+GGL V ++ +P+ HFIY AD + PYG +++ + Sbjct: 28 PPSVSGPAPIGIFDSGVGGLSVYMHLKQALPQEHFIYYADTLNVPYGPRPSSEIQQLSLT 87 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 ++ L VIACN+A R +P + +G VPA+K A + S +++L Sbjct: 88 AVDWLVAAG-CKLVVIACNSASAHALHLARQKYPHIPIVGLVPALKPAVLNSTSKNVAVL 146 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +T ATL + +I Y + ++ L VE G+ + D + ++ Sbjct: 147 ATKATLDGPLLNTVIDEYARPSQVTVIKWFDPELVPWVE---AGMPMDSDTPMR-LKQQL 202 Query: 185 IEKEGKRTDVIVLACTHYPLIVH-VFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241 + ++ D +VL CTHYP V +++ + +D+ +IA R + LL + + Sbjct: 203 YQFAQQQVDHLVLGCTHYPFFREFVLAEVAKQGLDIKVVDSGAAIAARVKALLQQQAAAE 262 Query: 242 TRVFD-DHALFLSGKPDIAMRRLMQGFGL 269 + H L P ++ MQG + Sbjct: 263 SSTARLGHKFLL---PTQSVLHSMQGLSV 288 >gi|227498833|ref|ZP_03928973.1| glutamate racemase [Acidaminococcus sp. D21] gi|226904285|gb|EEH90203.1| glutamate racemase [Acidaminococcus sp. D21] Length = 274 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 6/243 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I + DSG+GGL VL+ ++ MP FI++ D PYG+ + +R + +D L Sbjct: 12 DRPIGVIDSGVGGLTVLKWLQKKMPHEQFIFIGDTARTPYGDRAREEI-QRFVKEMTDCL 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNT L D +R+ + +G T + + +T T+ Sbjct: 71 ARRKIKELVVACNTITVLGLDTIRNGY-DFDVIGMAKGASNIREVTHNNKVGFFATDFTV 129 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 I + + L +E G ++ IK+ ++ + Sbjct: 130 STGAHKREIERLDPGVEVFGLGCPKLVPLIESEKFGRPEMQEAIKEYVDA----MKVHGI 185 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L+CTHYP + V LD ++ A L +T + Sbjct: 186 DTLLLSCTHYPFLHDEIAAAFGPQVTVLDPAEMTTDEAIKHLQNKGLLKTEGEGSLEVCF 245 Query: 253 SGK 255 + Sbjct: 246 TAD 248 >gi|85708359|ref|ZP_01039425.1| glutamate racemase [Erythrobacter sp. NAP1] gi|85689893|gb|EAQ29896.1| glutamate racemase [Erythrobacter sp. NAP1] Length = 264 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 122/262 (46%), Gaps = 8/262 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + IL+FDSG+GGL V +R L+P+ IY AD G PYG + + R+ L Sbjct: 2 NPSSPILLFDSGVGGLTVHAAVRKLLPDAPIIYAADLAGLPYGTKSEAEIAARVAGLLGR 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + ++YQP L IACNTA T+ +R + +G VPAIK A+A T++G I +L T A Sbjct: 62 MSERYQPRLVCIACNTASTIALGMVRDVL-EVPIVGTVPAIKPASAITKTGTIGLLGTQA 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R+ Y NL + + + + L E G ++ I+ + G Sbjct: 121 TVRQAYVDNLEAEFAADKRLLRHGASGLVRAAEAKLRGEEVDRSVIQSAVATLRAMDGGD 180 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 + D +VLACTH+PL+ V ++D +D IARR L Q + Sbjct: 181 QIDTVVLACTHFPLLTEELGAEFGDGVSFVDGADGIARRIAHL----TKGQAFDPAAPSF 236 Query: 251 FLSGKPDIAMRRLMQ---GFGL 269 +S RL Q +G Sbjct: 237 AVSTGDLAQFERLSQTLHNYGF 258 >gi|270157815|ref|ZP_06186472.1| glutamate racemase [Legionella longbeachae D-4968] gi|269989840|gb|EEZ96094.1| glutamate racemase [Legionella longbeachae D-4968] Length = 271 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 10/251 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +I +FDSG+GGL VL+ +R +P+ F+Y+ D PYG +K+ M + ++ Sbjct: 5 QLAIGVFDSGMGGLTVLRALREGLPQESFVYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPAT 131 ++ VIACNTA T L+S P M L P A A T++ + +L+T T Sbjct: 65 ERR-IKALVIACNTATTAALPYLQSMLPDMPVLGVVAPGAAAAVAATKNNQVIVLATETT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + LI + + I+ + +L + EE ++ + +K ++G E Sbjct: 124 IASNAYQQLIAQQLPRAVINTRACSVLVALAEEGMVNNQVAREALKYYLDGFTHE----- 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHA 249 D ++L CTH+P+ + + P V +D++ + A LL + + ++ Sbjct: 179 -DTVLLGCTHFPVFKSLLISILPEGVSIVDSAHATAIALYRLLEKQDLLNDVPSLYRRVT 237 Query: 250 LFLSGKPDIAM 260 ++ Sbjct: 238 YLVTDSIKRFQ 248 >gi|303246204|ref|ZP_07332485.1| glutamate racemase [Desulfovibrio fructosovorans JJ] gi|302492600|gb|EFL52471.1| glutamate racemase [Desulfovibrio fructosovorans JJ] Length = 297 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 8/248 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL V + + +P +Y D PYG + + + + +L K Sbjct: 35 PIGIFDSGVGGLTVARAVMDRLPSESIVYFGDTARVPYGVKSPDTVARYAGQITNFLLAK 94 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L ++ACNT + + + P+ A A T++ I I++TP+T+ Sbjct: 95 -NVKLLIVACNTMAAVALPAITALSPAPVLEVISAGAASALAATRTKRIGIIATPSTIAS 153 Query: 135 TYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + + + + VEE + + E + D Sbjct: 154 RAYESALAALGGPEVFTASKACPLFVPLVEEGW----LAHPATRLVAEEYLTPLLAENLD 209 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALF 251 ++L CTHYPL+ + +++ V D++ ++A RA +L + + H Sbjct: 210 TLILGCTHYPLLAPLLAEVAGPDVRLQDSATAVAERAAAVLGYLGLAAPKGPDTPRHVFH 269 Query: 252 LSGKPDIA 259 ++ P Sbjct: 270 VTDMPRKF 277 >gi|296283687|ref|ZP_06861685.1| glutamate racemase [Citromicrobium bathyomarinum JL354] Length = 264 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 1/223 (0%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 ILIFDSG+GGL +L ++R +P+ IY AD G PYG + + R+ L Sbjct: 2 NPAAPILIFDSGVGGLTILAELRKTLPQAPVIYAADFAGLPYGTKSEAEVAARVCGLLGR 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + ++YQP L IACNTA T+ +R + +G VPAIK AA TQ+G+I +L T A Sbjct: 62 MAERYQPRLICIACNTASTIALSMVRDVL-EVPIVGTVPAIKPAALATQTGVIGLLGTGA 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+R+ Y L + + + +S L E G + E + + + G + + + Sbjct: 121 TVRQPYVDRLEAEFAADKRLIRHASDALVPLAEAKMRGETLAEGAVAEAVAGLRDDPQAQ 180 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 D +VLACTH+PL+ R + + +D + IARR L Sbjct: 181 DLDTLVLACTHFPLLADELRAVFGQDIQLVDGAQGIARRIASL 223 >gi|253581900|ref|ZP_04859124.1| glutamate racemase [Fusobacterium varium ATCC 27725] gi|251836249|gb|EES64786.1| glutamate racemase [Fusobacterium varium ATCC 27725] Length = 263 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 11/260 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + SI +FDSG+GG VL+ M ++P + IY AD PYG L+ + L Sbjct: 4 EYSIGVFDSGVGGTTVLKIMAEILPHENIIYYADSGNAPYGKKTVEELQSLCFNIMDFFL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131 K + VIACNTA ++ + + +G + P K AA +++G I++L+TP T Sbjct: 64 -KNRCKAVVIACNTATAAALTAIKERY-DIPVIGVINPGAKAAANMSKNGHIAVLATPFT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 I + ++ L + +EE + + D + I Sbjct: 122 ANSNAYGEEIKKISKKVSVYQEGCSELCTMIEEGWENFENRGDILDGHISQF-----PGS 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250 D +VL CTHYP+I + +D + L + ++ Sbjct: 177 ADTLVLGCTHYPIIKEDIEKYFSG--KIVDPAKETVIELVEALRDDDLLNDSKDRGKIEF 234 Query: 251 FLSGKPDIAMRRLMQGFGLK 270 F+SG + + + G + Sbjct: 235 FVSGNKEQFRKIAEKFLGFE 254 >gi|87199816|ref|YP_497073.1| glutamate racemase [Novosphingobium aromaticivorans DSM 12444] gi|87135497|gb|ABD26239.1| glutamate racemase [Novosphingobium aromaticivorans DSM 12444] Length = 277 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 87/254 (34%), Positives = 126/254 (49%), Gaps = 3/254 (1%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 N +L+FDSG+GGL VL+K+R ++PE IYVAD+ G PYG + + R+ Sbjct: 9 NQAATVDPGAPLLLFDSGVGGLSVLRKVRAVLPEAPVIYVADNAGLPYGAKTEAQIAARV 68 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 L + ++ P L IACNTA T+ +R + +G VPAIK AAA T++G+I Sbjct: 69 SGLLGRLTERLAPRLVCIACNTASTIALASVREVL-EVPIVGTVPAIKPAAALTRTGVIG 127 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L T AT+R+ Y L + + H+ + L + E G ++ + Sbjct: 128 LLGTEATIRQAYVDRLEAEFAADKHLLRHGAPELVAAAEAKLRGERVDPAVYARAAAALR 187 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 G R D +VLACTH+PL+ R+ V ++D SD IARR L R Sbjct: 188 AMPGGDRIDTVVLACTHFPLVEDELREAFGPEVRFVDGSDGIARRIAHL--TQGQAWRRT 245 Query: 245 FDDHALFLSGKPDI 258 D ALF G D+ Sbjct: 246 EPDLALFTRGGEDV 259 >gi|332665127|ref|YP_004447915.1| glutamate racemase [Haliscomenobacter hydrossis DSM 1100] gi|332333941|gb|AEE51042.1| Glutamate racemase [Haliscomenobacter hydrossis DSM 1100] Length = 267 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 6/251 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 I +FDSGIGGL V + +P IY D PYG+ A++ + + + Sbjct: 4 ASQPIGVFDSGIGGLTVANAIVKKLPNEEIIYFGDTAHLPYGDKSADAIRYYCLRISKFL 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAVPAIKQAAAYTQSGLISILSTPA 130 LD+ + V+ACN+A + D L F A F+ V + A A + +++T A Sbjct: 64 LDQG-CKMIVVACNSASSAGYDVLLEFFRDQALFVNVVDPLVSAVAKRGFDKVGVIATKA 122 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ +H ++ +++ +LA +EE + K ++ Sbjct: 123 TVQSGIYHKQLHRVSPTLNVESLATPLLAPMIEEGF----VHNQASKAILDMYLAHPGFV 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 + ++LACTHYPLI V+ D++ +A L + H Sbjct: 179 DIEALLLACTHYPLIRPEIDDYFQHQVEVFDSTRVVAEEVAFKLAQNGLLNPEKQHPHRF 238 Query: 251 FLSGKPDIAMR 261 ++S Sbjct: 239 YVSDYTKSFEE 249 >gi|124005254|ref|ZP_01690095.1| glutamate racemase [Microscilla marina ATCC 23134] gi|123989076|gb|EAY28654.1| glutamate racemase [Microscilla marina ATCC 23134] Length = 268 Score = 250 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 7/258 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N+I IFDSGIGGL V + +R L+P+ IY D PYG+ AL+ + + + +L Sbjct: 4 SNAIGIFDSGIGGLTVARAVRQLLPQESIIYFGDTAHLPYGDKSTAALQAYAIKICNVLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPA 130 + + ++ACN+A D ++ S A + P I + ++ T Sbjct: 64 -QQNCKVILMACNSASVAAYDLVKEYVGSRAKVMNVIEPMINYINDVYAGKNVGLIGTKQ 122 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + + +++ +L +EE I+ + IE +E + Sbjct: 123 TILSNVYKKKVDQLGAGIDLRSLATPLLVPMIEENFFKNSIR----AEIIETYLSREELQ 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D ++L CTHYPLI ++ V+ LD+S+ +A + +L N Sbjct: 179 DIDALILGCTHYPLIKASIQKFYNTKVEVLDSSEIVASSLKGMLEMHNLTNKTGKVLQKF 238 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++S FG Sbjct: 239 YVSDFTQSFETSTQLFFG 256 >gi|206560649|ref|YP_002231414.1| glutamate racemase [Burkholderia cenocepacia J2315] gi|198036691|emb|CAR52590.1| putative glutamate racemase [Burkholderia cenocepacia J2315] Length = 285 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 11/257 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + +R + + + Sbjct: 11 RAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFITERTLAI-GE 69 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L + VIACNTA +R S+ +G P IK AAA + +G+ +L+T + Sbjct: 70 WLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSATGVAGVLATQS 128 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL L+ Y + L +E ++ +E Sbjct: 129 TLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALLERYIQPMLDD 184 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA- 249 D +VL CTHYP R L + +D SD+IAR+ +L HA Sbjct: 185 GADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLRAP--AGTHAA 242 Query: 250 --LFLSGKPDIAMRRLM 264 F S + +R L Sbjct: 243 PPRFCSTSDGLQLRALA 259 >gi|78043344|ref|YP_359176.1| glutamate racemase [Carboxydothermus hydrogenoformans Z-2901] gi|123577026|sp|Q3AFA8|MURI_CARHZ RecName: Full=Glutamate racemase gi|77995459|gb|ABB14358.1| glutamate racemase [Carboxydothermus hydrogenoformans Z-2901] Length = 265 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 105/253 (41%), Gaps = 15/253 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG+ VL+++ L+P +F Y+ D PYG+ L + L K Sbjct: 8 IGIFDSGVGGVTVLKELINLLPGENFYYLGDTAHVPYGSKSKEELLILGDAIIRFFL-KL 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V ACNT+ + L+ +P + G + +++ + +L+T AT++ Sbjct: 67 GVKMVVFACNTSSAITLPILKERYPVL-MEGMLEPLRK--NMPAKAKVGVLATEATVKSG 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + +++++ +E+ K E+ ++ E E+ + Sbjct: 124 LYQKKLMETNKFQEVYMIACPQYVPLIEKGIVSGKEVEEATREYFEPLLKEEVRD----V 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYP + ++L P + +D + +AR L N +++G Sbjct: 180 VLGCTHYPFLTETIQKLYP-KIQVIDPAAYVAREVYRKLKE-NKLLGENGGKVQFYVTGD 237 Query: 256 PDIAMRRLMQGFG 268 + ++ G Sbjct: 238 -----EKSLKNLG 245 >gi|239944153|ref|ZP_04696090.1| glutamate racemase [Streptomyces roseosporus NRRL 15998] gi|239990608|ref|ZP_04711272.1| glutamate racemase [Streptomyces roseosporus NRRL 11379] gi|291447623|ref|ZP_06587013.1| glutamate racemase [Streptomyces roseosporus NRRL 15998] gi|291350570|gb|EFE77474.1| glutamate racemase [Streptomyces roseosporus NRRL 15998] Length = 277 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 96/259 (37%), Gaps = 8/259 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GGL V+ ++ L+P H IY+ D PYG ++K + ++ Sbjct: 6 APIGVFDSGFGGLTVVSALQRLLPSEHIIYLGDSARQPYGARRLAEVRKMSLECLDQLV- 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 VIACNTA + + R + PA + AA+ T++ + ++ T AT Sbjct: 65 GLGVKAIVIACNTASAAVLRDARERYQVPVIEVVGPASRMAASATKNHSVGVVCTEATRV 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + + + VE E+ E D Sbjct: 125 AKAYEDAFAA-APHIDLVTKACPAFVGFVEAGVT----TGPELVSVAEQYLTPLVEADID 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHALF 251 ++L CTHYPLI + V + ++++ A+ L R N + Sbjct: 180 TLILGCTHYPLISDAISGVMGERVALISSAEAAAQELAECLLRWNLCRPASGGRPSRLFL 239 Query: 252 LSGKPDIAMRRLMQGFGLK 270 +G + R + GL Sbjct: 240 TTGDIEHFERIGSRFLGLP 258 >gi|254292511|ref|YP_003058534.1| glutamate racemase [Hirschia baltica ATCC 49814] gi|254041042|gb|ACT57837.1| glutamate racemase [Hirschia baltica ATCC 49814] Length = 265 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 6/259 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N +L+FDSG+GGL ++ +R +P+ Y AD FPYG D L+ RL L +++ Sbjct: 2 NRVLVFDSGVGGLSIVNSIREQIPDTIVDYAADAGFFPYGLKSDEELQARLPKLCKALIE 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K +P + V+ACNTA TL +R + +G VPAIK AA TQ+G I +L+TP T+R Sbjct: 62 KAKPDIFVMACNTASTLSLASVREIV-DIPVVGTVPAIKPAAEITQTGTIGVLATPGTIR 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 R Y +L + + + + L E + G + +D I F EG+ D Sbjct: 121 RQYLDDLERQFAAHIKVVRHGTAGLVELAERHVRGEILSQDMFDNAISPLFSGAEGQNID 180 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVD-WLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 V+VLACTH+PLI ++ P V +D+ D+I R+ LL R ++ D + L Sbjct: 181 VVVLACTHFPLIRDQIQKACPAYVTKLIDSGDAIGRQVGRLLVR--EKSSKKSPDACVLL 238 Query: 253 SG--KPDIAMRRLMQGFGL 269 +G A +++ FG Sbjct: 239 TGGRANRDAYFPVLEKFGY 257 >gi|170733557|ref|YP_001765504.1| glutamate racemase [Burkholderia cenocepacia MC0-3] gi|169816799|gb|ACA91382.1| glutamate racemase [Burkholderia cenocepacia MC0-3] Length = 285 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 105/257 (40%), Gaps = 8/257 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + Sbjct: 1 MTNPSHATAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + L + VIACNTA +R S+ +G P IK AAA + + Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSAT 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G+ +L+T +TL L+ Y + L +E ++ + Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALL 174 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E D +VL CTHYP R L + +D SD+IAR+ +L Sbjct: 175 ERYIQPMLDDGADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLR 234 Query: 241 QT--RVFDDHALFLSGK 255 + Sbjct: 235 APAGTHAAPPRFCSTSD 251 >gi|116626345|ref|YP_828501.1| glutamate racemase [Candidatus Solibacter usitatus Ellin6076] gi|116229507|gb|ABJ88216.1| glutamate racemase [Candidatus Solibacter usitatus Ellin6076] Length = 252 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 17/246 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VLQ +R +P+ F+YV D PYG + + + + Sbjct: 2 IGVFDSGVGGLTVLQALRKRLPQREFLYVGDTARAPYGRKPAAMVAGFACEIADYLCGRG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA + EL + G V A ++ A T++G I +++T AT+ Sbjct: 62 -VEAIVVACNTASAVALPELERRCK-VPVWGVVDAGVEAATRMTRTGHIGVIATRATIAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + +L VEE + + + + G D Sbjct: 120 AAYQRRLE--ARGLRVWARECPMLVHLVEEGLAESEEADVLSRHYLSG------RPEIDT 171 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTHYPL+ ++ + V +D++ A R + +G Sbjct: 172 LILGCTHYPLLRASLQRAAGGHVRLVDSASVTAERVAA------AMTDEGNGRVTYYATG 225 Query: 255 KPDIAM 260 Sbjct: 226 DTKAFA 231 >gi|220903374|ref|YP_002478686.1| glutamate racemase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867673|gb|ACL48008.1| glutamate racemase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 311 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 99/260 (38%), Gaps = 27/260 (10%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 + +FDSG+GGL VL+ + +P +Y+ D PYG + + + ++D Sbjct: 8 PVGLFDSGMGGLTVLKALNHRLPGEDLLYLGDTARLPYGTKGPDTIVRYTLKAAQKLVD- 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 + V+ACNTA LR F + LG V P + AA +++G I +L T AT+ Sbjct: 67 MGVKMLVVACNTATAAALPALRQHFAPLPVLGVVEPGAQAAAQASRNGHIVVLGTEATIN 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR-- 191 I + + + + EE + E ++ +EG F + Sbjct: 127 GGAYQQAIARIRPEAVVLGRACNLFVPLAEEGWMDGPLVEGVARRYLEGFFCAPDTNGAN 186 Query: 192 -----------------------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 D ++L CTHYPL+ R + V +D++ A+ Sbjct: 187 GSNDAASTAQPRAAAGAANAPVQPDTLLLGCTHYPLLQGALRHVVGPDVRIVDSAAITAQ 246 Query: 229 RARCLLPRINTHQTRVFDDH 248 L R+ + Sbjct: 247 VVAGELARLEMLHPDTREGT 266 >gi|162420811|ref|YP_001604760.1| glutamate racemase [Yersinia pestis Angola] gi|165928375|ref|ZP_02224207.1| glutamate racemase [Yersinia pestis biovar Orientalis str. F1991016] gi|165936981|ref|ZP_02225547.1| glutamate racemase [Yersinia pestis biovar Orientalis str. IP275] gi|166009624|ref|ZP_02230522.1| glutamate racemase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213755|ref|ZP_02239790.1| glutamate racemase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401233|ref|ZP_02306733.1| glutamate racemase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420886|ref|ZP_02312639.1| glutamate racemase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425952|ref|ZP_02317705.1| glutamate racemase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|270488739|ref|ZP_06205813.1| glutamate racemase [Yersinia pestis KIM D27] gi|294505559|ref|YP_003569621.1| glutamate racemase [Yersinia pestis Z176003] gi|162353626|gb|ABX87574.1| glutamate racemase [Yersinia pestis Angola] gi|165915223|gb|EDR33834.1| glutamate racemase [Yersinia pestis biovar Orientalis str. IP275] gi|165919605|gb|EDR36938.1| glutamate racemase [Yersinia pestis biovar Orientalis str. F1991016] gi|165991546|gb|EDR43847.1| glutamate racemase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205157|gb|EDR49637.1| glutamate racemase [Yersinia pestis biovar Antiqua str. B42003004] gi|166961015|gb|EDR57036.1| glutamate racemase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049258|gb|EDR60666.1| glutamate racemase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055100|gb|EDR64899.1| glutamate racemase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|262363626|gb|ACY60347.1| glutamate racemase [Yersinia pestis D106004] gi|262367556|gb|ACY64113.1| glutamate racemase [Yersinia pestis D182038] gi|270337243|gb|EFA48020.1| glutamate racemase [Yersinia pestis KIM D27] gi|294356018|gb|ADE66359.1| glutamate racemase [Yersinia pestis Z176003] Length = 240 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 72/236 (30%), Positives = 121/236 (51%), Gaps = 4/236 (1%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 MP+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L Sbjct: 1 MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 60 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 R F + +G VPAIK A T++G++ +L+T AT+ +YT +LI + + C I L+ S Sbjct: 61 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGS 119 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 L E G + + +KK + +E D IVL CTH+PL+ Q+ P Sbjct: 120 SELVEVAETKLHGGVVPLEVLKKILHPWLSMREP--PDTIVLGCTHFPLLTEELAQVLPE 177 Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLK 270 +D+ +IARR L+ + ++ A ++ D A+ ++Q +G Sbjct: 178 GTRMVDSGAAIARRTAWLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFP 233 >gi|332535187|ref|ZP_08410994.1| glutamate racemase [Pseudoalteromonas haloplanktis ANT/505] gi|332035406|gb|EGI71906.1| glutamate racemase [Pseudoalteromonas haloplanktis ANT/505] Length = 266 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 123/257 (47%), Gaps = 10/257 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I++FDSGIGG VL+ ++ +P + Y D+ PYG + RL L I Sbjct: 1 MSAHIMVFDSGIGGTTVLEHIKQSIPNAQYSYFMDNALLPYGAQSQQTIINRLCSLIHFI 60 Query: 72 LDK-YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L VIACNTA T +R + +G VPAIK AA T+S I +L+TPA Sbjct: 61 KANTLNVDLIVIACNTASTSALSAVRQ-ITDIPIVGVVPAIKPAAELTRSNHIGLLATPA 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ +YT LI + ++L SS+ L + EE + +++ + ++ I K Sbjct: 120 TVASSYTKTLIAEHARNVIVNLYSSVELVTLAEECFFTGSLDTNKLYQVLDELHI---DK 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDD 247 DV+VL CTH+P++ Q V LD+ +IA R LL ++N QT + Sbjct: 177 TIDVLVLGCTHFPILAGPISQYFEGNVKLLDSGVAIANRVNFLLNQLNLCADKQTDIKKP 236 Query: 248 HALFLSGKPDIAMRRLM 264 + + D+ +L Sbjct: 237 LQYYATA--DVFSNKLA 251 >gi|307719381|ref|YP_003874913.1| glutamate racemase [Spirochaeta thermophila DSM 6192] gi|306533106|gb|ADN02640.1| glutamate racemase [Spirochaeta thermophila DSM 6192] Length = 286 Score = 249 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 10/261 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +L DSGIGG+ L + F+YVAD FPYG L+ L+ L +D+L Sbjct: 26 RPVLFLDSGIGGIPYLLWALEHIEGEEFVYVADRAHFPYGPRSHEELEAILVDLVADLLR 85 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +++P L V+ACNTA + LR+ + + F+G VPAIK AA+ T++G++ +L+T TLR Sbjct: 86 RFRPKLVVLACNTASVVGLPALRARY-EIPFVGVVPAIKPAASLTRTGVVGLLATERTLR 144 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEGKR 191 YT LI +Y + + V S + VE +E +++ +E C + Sbjct: 145 DFYTDELIAAYANGARVVKVPSPHIVEFVEHRFIDAAEEERRTAVREAVERCVA----QG 200 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D IVL CTH+ + R L+ V +D+ + + RR LL + + R + + Sbjct: 201 ADTIVLGCTHFVFLEAQIRSLAGEHVQVIDSREGVGRRLVHLLSYLPCGR-RGPSTASFY 259 Query: 252 LSGK--PDIAMRRLMQGFGLK 270 L+G+ P+ R + +G+ Sbjct: 260 LTGRTPPEGRYVRFTRHYGVS 280 >gi|258405574|ref|YP_003198316.1| glutamate racemase [Desulfohalobium retbaense DSM 5692] gi|257797801|gb|ACV68738.1| glutamate racemase [Desulfohalobium retbaense DSM 5692] Length = 279 Score = 249 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 7/262 (2%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++ I +FDSG+GGL VL+++ ++P YVAD PYG + +++R + L Sbjct: 7 ATSPMEGGIGVFDSGVGGLSVLKEIDRVLPHEDLWYVADSAEAPYGEKSEEEIRQRSLEL 66 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++ + L VIACNTA +ELR+ P + PA+K A A + SG I +L+ Sbjct: 67 ARFLVQRGAKAL-VIACNTATAAAAEELRAQCPVPV-VAVEPAVKPAVALSCSGCIGVLA 124 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T TL+ L+ Y + + + L RVE + + ++ Sbjct: 125 TTGTLQSKRFQALLKRYAGSAEVAVQACPGLVERVEMGDLDGPVTRVLLGSYVQA----L 180 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246 + D +VL CTHYP + + R + LD ++AR L R+ + Sbjct: 181 AERGADTLVLGCTHYPFLRPLVRDCIGETMPVLDTGLAVARHLHSELRRLELERPAARQG 240 Query: 247 DHALFLSGKPDIAMRRLMQGFG 268 + +G+P L + +G Sbjct: 241 QRRFWTTGEPARCESVLGRLWG 262 >gi|319948539|ref|ZP_08022670.1| glutamate racemase [Dietzia cinnamea P4] gi|319437786|gb|EFV92775.1| glutamate racemase [Dietzia cinnamea P4] Length = 293 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 97/245 (39%), Gaps = 9/245 (3%) Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86 V + + +P+ +YV D PYG ++ + + ++D+ L VIACNT Sbjct: 43 TVARAIVDQLPDESVVYVGDTAHGPYGPLPLAQVRAHALAVADQLVDRGVKAL-VIACNT 101 Query: 87 AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146 A + + R +P PA ++A A T+SG I +++T AT+ + + + Sbjct: 102 ASAAMLRDARERYPVPVVEVIQPAARRAVATTRSGRIGVIATRATVAS-RAYDDAVAAAA 160 Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 + V+ VE + ++ E D +VL CTHYPL+ Sbjct: 161 GIELTSVACPKFVEFVERGITSGR----QVLGLAEAYLAPIRDADVDTLVLGCTHYPLLS 216 Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDHALFLSGKPDIAMRRL 263 V + + V + +++ A+ +L + H ++G PD R Sbjct: 217 GVVQLAAGDHVTLVSSAEETAKDVLRVLTAEDLLRPHDPADPPTREYLVTGDPDAFRRVA 276 Query: 264 MQGFG 268 + G Sbjct: 277 SRFLG 281 >gi|315125844|ref|YP_004067847.1| glutamate racemase [Pseudoalteromonas sp. SM9913] gi|315014358|gb|ADT67696.1| glutamate racemase [Pseudoalteromonas sp. SM9913] Length = 262 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 78/245 (31%), Positives = 117/245 (47%), Gaps = 6/245 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I++FDSGIGG VL+ ++ +P + Y D+ PYG + RL L I Sbjct: 1 MSAHIMVFDSGIGGTTVLEHIQQSIPHAQYSYFMDNALLPYGAQSQQTIIHRLCGLIQFI 60 Query: 72 LDK-YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 D+ L VIACNTA T +R + +G VPAIK AA TQS I +L+TPA Sbjct: 61 EDESLNVDLIVIACNTASTSALSSVRQ-ITDIPIVGVVPAIKPAAQLTQSKHIGLLATPA 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ YT LI + S L SS+ L + E + D++ E++ K Sbjct: 120 TVSSPYTDALIKEHASSITTSLYSSVELVTLAETLFFTQHLDIDKLHTELDRL---NINK 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 DV+VL CTH+P++ V LD+ +IA+R LL +++ +Q + Sbjct: 177 DIDVLVLGCTHFPILAKPISDYFNTQVQLLDSGAAIAKRVSSLL-KLSDNQAGIKKPLHY 235 Query: 251 FLSGK 255 + + Sbjct: 236 YATAD 240 >gi|311693694|gb|ADP96567.1| glutamate racemase [marine bacterium HP15] Length = 277 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 13/262 (4%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL V + +P +Y+AD+ GFPYG + + R L + L+ Y Sbjct: 1 MFDSGVGGLSVAACIHRQLPGLEIVYLADNAGFPYGEKSEAVVIDRCCSLITRALELYPS 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ACNTA T++ LR+ ++ +G VPAIK AAA + + + +L+TPAT+RR Y Sbjct: 61 DAIVVACNTASTVVLPHLRAM-TAVPVVGVVPAIKPAAAKSVNRRMGLLATPATVRRPYL 119 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L+ + C I + L E+ GI++ E+ + D +VL Sbjct: 120 DRLVEEFAGDCRIERIGHPGLVRWAEDLVSGIEVP----LAELSEAMRPFKEAGVDTVVL 175 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--------QTRVFDDHA 249 CTHYPL++ R P W+D+ ++IARR LL + A Sbjct: 176 GCTHYPLLLESLRASLPTVRFWVDSGEAIARRVAWLLEQTGRLDVAQGPVASAGKQPVSA 235 Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271 SG + M G GL++ Sbjct: 236 ALFSGPAPKGIAPFMAGLGLEA 257 >gi|120555141|ref|YP_959492.1| glutamate racemase [Marinobacter aquaeolei VT8] gi|120324990|gb|ABM19305.1| glutamate racemase [Marinobacter aquaeolei VT8] Length = 281 Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 6/237 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V + +P +Y+AD+ GFPYG+ + + +R L L Sbjct: 5 RPRVLVFDSGVGGLSVAACIHQTLPGAELVYLADNAGFPYGDKPEQVVIERCCTLIRQCL 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + V+ACNTA T++ ELR+ +G VPA+K AAA + + I +L+TPAT+ Sbjct: 65 AQFPCDVVVVACNTASTVVLPELRANIAVPV-VGVVPAVKPAAACSVNRRIGLLATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R Y +LI + C + + L EE G D++ E++G + Sbjct: 124 KRAYLDDLIQKFARDCEVVRLGHPALVRWAEELVGGS--APDQV--EVDGAMVPLREAGV 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDH 248 D +VL CTHYPL++ R+ P + W+++ ++IARR + + +H Sbjct: 180 DTVVLGCTHYPLLLPWLRKALPEVMHWVESGEAIARRVAWWFEQAGDLACAQTPPNH 236 >gi|224543164|ref|ZP_03683703.1| hypothetical protein CATMIT_02364 [Catenibacterium mitsuokai DSM 15897] gi|224523951|gb|EEF93056.1| hypothetical protein CATMIT_02364 [Catenibacterium mitsuokai DSM 15897] Length = 264 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 6/250 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I +FDSG+GG+ VLQ + +MP + + D + PYG +++ + + Sbjct: 11 KKEEYIGVFDSGVGGVSVLQAIHEMMPGENLYFFGDSLNAPYGEKTLEDVQQLTLNAIEN 70 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + K VIACNTA + LR + + +G PA+K AA ++ I +++T Sbjct: 71 MNKKKHLKAIVIACNTATSAAVTLLREKYTDIPVIGIEPALKPAALSKKNSCILVMATAN 130 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR L Y I V LA R+E+ + E ++ + + +GK Sbjct: 131 TLRLDKFHQLAERYDKSATIIPVPCYGLAKRIEQG----NLDEPDLIELLTDLIGPYKGK 186 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTHYP + + + D + ++ L + + D Sbjct: 187 -VDSVVLGCTHYPFVKDQIATVLG-DIPMFDGAYGTSKHLYNCLKECDCLNDQKEGDILY 244 Query: 251 FLSGKPDIAM 260 S + +I + Sbjct: 245 GSSKEDEIPI 254 >gi|107028624|ref|YP_625719.1| glutamate racemase [Burkholderia cenocepacia AU 1054] gi|116690217|ref|YP_835840.1| glutamate racemase [Burkholderia cenocepacia HI2424] gi|105897788|gb|ABF80746.1| glutamate racemase [Burkholderia cenocepacia AU 1054] gi|116648306|gb|ABK08947.1| glutamate racemase [Burkholderia cenocepacia HI2424] Length = 285 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 105/257 (40%), Gaps = 8/257 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + Sbjct: 1 MTNPSHAIAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + L + VIACNTA +R S+ +G P IK AAA + + Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSAT 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G+ +L+T +TL L+ Y + L +E ++ + Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRTLL 174 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E D +VL CTHYP R L + +D SD+IAR+ +L Sbjct: 175 ERYIQPMLDDGADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLR 234 Query: 241 QT--RVFDDHALFLSGK 255 + Sbjct: 235 APAGTHAAPPRFCSTSD 251 >gi|332184267|gb|AEE26521.1| Glutamate racemase [Francisella cf. novicida 3523] Length = 265 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 10/245 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL +++ + ++P IY D PYG ++K ++ Sbjct: 4 NRPIGVFDSGIGGLTIVKNLINILPNEDIIYFGDIARIPYGTKSRAMIQKFAAQTAKFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + +IACNT + KD ++ ++ + + A + + +++TPAT+ Sbjct: 64 EQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDSLSKVGVIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH ++ + S +EE +I E K+ + K Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVELVAKEYLSY----FHDKNI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALF 251 ++L CTHYP+I ++ V +D S ++ LL ++ ++ + Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFDNKLLNRANSNPEYRFY 234 Query: 252 LSGKP 256 ++ P Sbjct: 235 VTDIP 239 >gi|257464953|ref|ZP_05629324.1| glutamate racemase [Actinobacillus minor 202] gi|257450613|gb|EEV24656.1| glutamate racemase [Actinobacillus minor 202] Length = 253 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 6/251 (2%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL + ++R ++P H++Y D+ FPY + AL +R + + I +K L V+ Sbjct: 1 MGGLTIYDEVRKVLPNAHYLYCFDNAFFPYSERSEQALIERAVKIVQKIAEKQPLDLVVV 60 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 ACNTA T++ LR F +G VPAIK AAA +++ I +L+T T++R Y +LIH Sbjct: 61 ACNTASTVVLPALREHF-DFPIVGTVPAIKPAAAISKTKTIGLLATVGTIKRPYVLDLIH 119 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 Y C + + + + E + +K+ +E D ++L CTH+ Sbjct: 120 RYAKDCQVEKIGNTQIVELAETKLLTGTVDLPSLKECVEPWL---NHPSLDTVILGCTHF 176 Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262 PL+ +QL P ++D+ ++IA+R + LL + H ++ F + + R Sbjct: 177 PLLKEELKQLLPQVTYFVDSGEAIAKRVQSLLLENHHHSQEKERENTAFCTELTENFKNR 236 Query: 263 --LMQGFGLKS 271 +M G KS Sbjct: 237 EVMMHKLGFKS 247 >gi|254302994|ref|ZP_04970352.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323186|gb|EDK88436.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 264 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72 I IFDSG+GG VL++M +P +IY D+ FPYG+ + L+K + + Sbjct: 6 QKIGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131 K L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T Sbjct: 66 -KNNCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKTTKNKNIAVISTKFT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 N S+ ++ ++ + A +E +KE+ ++ + K Sbjct: 124 AESHGYKNKAKMLDSELNVKEIACIEFAQMIESGWDTFDN-----RKELLNKYLSEIPKN 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250 TD +VL CTHYPLI + + +D + I RA L +N + Sbjct: 179 TDTLVLGCTHYPLIRKDIEKNI--KIKVVDPAVEIVERATQTLTTLNLLNDKKEKGKVIF 236 Query: 251 FLSGK 255 F++G+ Sbjct: 237 FVTGE 241 >gi|220930761|ref|YP_002507670.1| glutamate racemase [Clostridium cellulolyticum H10] gi|220001089|gb|ACL77690.1| glutamate racemase [Clostridium cellulolyticum H10] Length = 258 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 6/237 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I DSG GG+ VL + +P+ ++IY AD PYG +++ + ++ + Sbjct: 6 IGFLDSGFGGITVLSEALRQLPKENYIYYADIEHVPYGTKTKEEVRQYVFQAVEFMVSQG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ ELR+ + LG PA+K A + +L+T TLR Sbjct: 66 -IKALVVACNTATSIAVRELRNMY-EFPILGMEPAVKPAVQNGNGKRVLVLATALTLREE 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NL+ + + + L E + IKK+++G + Sbjct: 124 KFHNLVQRVDQEHVVDYLPFPELVELAENMVFDYEKVIPVIKKKLDGYNL----NNYKTF 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 VL CTH+P+ ++ F+++ P +D +D S+ R + LL + T + + +F Sbjct: 180 VLGCTHFPIYINAFKEVLPPFIDIIDGSEGTIRYLKLLLEERHLISTNINGGNIVFF 236 >gi|254247709|ref|ZP_04941030.1| Glutamate racemase [Burkholderia cenocepacia PC184] gi|124872485|gb|EAY64201.1| Glutamate racemase [Burkholderia cenocepacia PC184] Length = 285 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 106/257 (41%), Gaps = 8/257 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + Sbjct: 1 MTNPSHATAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R + + + L + VIACNTA +R S+ +G P IK AAA +++ Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRECL-SIPLVGVEPGIKPAAALSET 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 G+ +L+T +TL L+ Y + L +E ++ + Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALL 174 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 E D +VL CTHYP R L + +D SD+IAR+ +L Sbjct: 175 ERYIQPMLDDGADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLR 234 Query: 241 QT--RVFDDHALFLSGK 255 + Sbjct: 235 APAGTHAAPPRFCSTSD 251 >gi|88810229|ref|ZP_01125486.1| glutamate racemase [Nitrococcus mobilis Nb-231] gi|88791859|gb|EAR22969.1| glutamate racemase [Nitrococcus mobilis Nb-231] Length = 284 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 6/255 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I IFDSG+GGL V+ +R L+P +YVAD PYG ++ R + L + Sbjct: 6 DDPIGIFDSGLGGLSVVHAIRRLLPTEQLLYVADCAHAPYGGCSAAFIRTRALALAGFLQ 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V+ACNTA + LR F + + PA+K+AAA T+ ++ +L+T TL Sbjct: 66 TQRAKAL-VVACNTATAAAAEALRRQF-ELPIIAMEPAVKRAAAATRCNVVGVLATEGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+ + + + L VE +I E + +E + + Sbjct: 124 ASARFAGLLARFAGAVQVVTRPAPDLVLLVERG----EIDGIEAMRRVEAHVSYLLHQGS 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D IVL CTHYP + + + + + +D ++AR R L + ++ Sbjct: 180 DTIVLGCTHYPHLRPLIERAAGPEIAIIDTGPAVARELRRRLEEKDLVRSSAGGGLIRIW 239 Query: 253 SGKPDIAMRRLMQGF 267 + + R + Q Sbjct: 240 TSATTSSARAIAQRL 254 >gi|144900285|emb|CAM77149.1| Asp/Glu racemase [Magnetospirillum gryphiswaldense MSR-1] Length = 284 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 103/257 (40%), Gaps = 4/257 (1%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 N I +FDSG+GGL V + +P +Y+ D PYG + + + Sbjct: 10 NTLEHMNCTRPIGVFDSGVGGLTVAAALHRRLPAETLLYLGDVARLPYGTKAPQTIIQYV 69 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLI 123 + + + + V+ACNTA L FP + LG + A +QAAA + G I Sbjct: 70 LRAAAFF-RSHDIKMLVLACNTASAHAAAALAQHFPDLLVLGVIDAGAEQAAAQSPGGRI 128 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 + +T T R I + I V + + VEE I E I++ + Sbjct: 129 VVAATEGTCRSGAFDRAIAVHRPTAAITPVPCPLFVALVEEGLTEGPIAEAMIRQYLAEH 188 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 F + D +VL CTH+PL+ R++ +D + ++A RA +L + Sbjct: 189 F--QGDGAADCLVLGCTHFPLLAPSLRKVLGPIPVLVDCAQAVAERAALMLAQKGLAAGS 246 Query: 244 VFDDHALFLSGKPDIAM 260 L+ + P Sbjct: 247 GKGGIHLYTTDAPTRFS 263 >gi|319942509|ref|ZP_08016819.1| hypothetical protein HMPREF9464_02038 [Sutterella wadsworthensis 3_1_45B] gi|319803912|gb|EFW00830.1| hypothetical protein HMPREF9464_02038 [Sutterella wadsworthensis 3_1_45B] Length = 271 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 15/263 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I I DSG GGL V + +R +P ++ AD PYG+ ++ RL + S +L Sbjct: 4 NRPIGILDSGFGGLSVARAIRAAIPNEDLVFAADCAYAPYGDNSSEYIQARLEHVVSFLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L V ACNTA + R+ SM +G PA+ A +T++G I +L+T T+ Sbjct: 64 AQQVKAL-VFACNTATAVGIRAFRARL-SMPIIGIEPAVFPALRHTRTGHIGVLATCRTI 121 Query: 133 RRTYTSNLIHSYVS--------QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +++ H + + V L VE + + + Sbjct: 122 ESQKYADVRHRAIEWAEVSRPMPVTVWDVPCPGLMECVERG----DFDSANVHELLVRYV 177 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 D IVL CTHYP + + + +P +D + ++A++ L ++ + Sbjct: 178 DPLTAHNVDEIVLGCTHYPFLANAIAKHAP-KATLIDPAPAVAQQLERRLAALDLATPQT 236 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 F + D A +++ Sbjct: 237 APGTERFFASGADAAREAVLRTL 259 >gi|227824990|ref|ZP_03989822.1| glutamate racemase [Acidaminococcus sp. D21] gi|226905489|gb|EEH91407.1| glutamate racemase [Acidaminococcus sp. D21] Length = 274 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 6/251 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 Q I + DSG+GGL VL++++ LMP HFI++ D + PYGN + RL+ +D Sbjct: 2 NKQQPIGVIDSGVGGLTVLRRLQELMPHEHFIFLGDTLNTPYGNRSREDII-RLVNQMTD 60 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L V ACNT L ++ +R+ +G K T++G I I++T Sbjct: 61 YLSYRNIKALVAACNTITVLGEETIRNGH-DFEVIGMAKGSKMIPRVTKTGRIGIMATDF 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ I + + + V L +E + E+K I+ + Sbjct: 120 TISTGAHKKEIQAAHPEYQVFGVGCPRLVPLIEH----EQFGTAELKDAIKEYTDILKSH 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D ++L+CTHYP + V LD ++ A++ R L + + Sbjct: 176 DVDTVMLSCTHYPFLKKEIEAAMGPAVTVLDPAEVTAKKCRYDLCERDLLCKTGTGTTEI 235 Query: 251 FLSGKPDIAMR 261 + + +R Sbjct: 236 CFTTDLERGLR 246 >gi|258542160|ref|YP_003187593.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01] gi|256633238|dbj|BAH99213.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01] gi|256636297|dbj|BAI02266.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-03] gi|256639350|dbj|BAI05312.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-07] gi|256642406|dbj|BAI08361.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-22] gi|256645461|dbj|BAI11409.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-26] gi|256648514|dbj|BAI14455.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-32] gi|256651567|dbj|BAI17501.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654558|dbj|BAI20485.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-12] Length = 289 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 101/278 (36%), Positives = 148/278 (53%), Gaps = 11/278 (3%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M+ID P L++ IL FDSGIGGL +++ ++ L P+ Y+AD FPYG +D L Sbjct: 1 MQIDG-PALSGLRH-ILAFDSGIGGLGIVRAIQALAPDICIDYLADTAIFPYGEQDDDFL 58 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ L S + + QP V+ACNTA TL + LR+ +P M F+G VP I+ AA TQ+ Sbjct: 59 IERIVSLLSQAIRRLQPQAVVVACNTASTLALEALRAAWPDMPFVGCVPPIRWAARITQT 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +I +L+T AT+RR Y S L Y +C + ++ LA E G + + I +EI Sbjct: 119 KVIGLLATRATVRRPYLSRLHALYAPECTLIAHAAPGLAGCAELAFRGQDVPDSTILQEI 178 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 EG F+ + R D + L CTHY ++ R LSP + WLD + ++AR LL + Sbjct: 179 EGLFVHPDSNRLDAVGLGCTHYTFVLDRLRALSPPGLTWLDPAPAVARHTCNLLAHLPQK 238 Query: 241 Q--------TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 T + DD ALF KP + G+ Sbjct: 239 AHAHPCAWFTALPDDQALFTHLKPYRFSAAAL-WEGVN 275 >gi|326790779|ref|YP_004308600.1| glutamate racemase [Clostridium lentocellum DSM 5427] gi|326541543|gb|ADZ83402.1| glutamate racemase [Clostridium lentocellum DSM 5427] Length = 253 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 6/240 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GG+ VL+ L+P+ +IY +D+ PYG + + + + ++ + Sbjct: 3 VGIFDSGVGGITVLKTALKLLPQVDYIYYSDNNHVPYGTKTKEEVLGYVNDVVAFLISQ- 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 Q VIACNTA ++ LRS +P + +G PA+K A + G + + +T TL+ Sbjct: 62 QVDAIVIACNTATSIAVKTLRSRYP-VPIIGMEPAVKLAFNHHSDGKVLVTATSLTLKEE 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NL++ + + ++ L + E + E +IK + + + I Sbjct: 121 KFKNLVNRLGEEERVCTLALPELVTFAEAFM----FDEAQIKAYFKEKLKDYPLEEIVAI 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ + ++ P + D ++ R + L+ R + + SGK Sbjct: 177 VLGCTHFVYFKKILKECLPPHITVYDGNEGTIRHLKELIDSEKVMHIRKEPEVTFYYSGK 236 >gi|302335208|ref|YP_003800415.1| glutamate racemase [Olsenella uli DSM 7084] gi|301319048|gb|ADK67535.1| glutamate racemase [Olsenella uli DSM 7084] Length = 257 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 64/252 (25%), Positives = 95/252 (37%), Gaps = 7/252 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GG+ VL+ + +P F Y D PYG + + D+ + Sbjct: 8 VGVFDSGVGGISVLRHLVDELPHEDFCYFGDSANNPYGGKTPDEILSLSRGIVDDMAARG 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA ++ LR +P + +G PAI+ A + I +++T TL Sbjct: 68 A-KAVVIACNTATSVAAARLRLEYPDLPIVGVEPAIRPATRAPRHERILVMATQVTLALD 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L S I + LA R+E+ I+ + D + Sbjct: 127 KYHRLAEECGSSSQILGEPCVGLAHRIEQGNLDAPDLHGLIETLVGRY-----RGTVDSV 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYP + R + V D ARR R LL + F S Sbjct: 182 VLGCTHYPFVRAQIRDVVG-DVPLFDGGTGAARRLRSLLAERDLLAEGDAPGSVAFASSL 240 Query: 256 PDIAMRRLMQGF 267 L + F Sbjct: 241 RGPGQLDLYERF 252 >gi|295132492|ref|YP_003583168.1| glutamate racemase [Zunongwangia profunda SM-A87] gi|294980507|gb|ADF50972.1| glutamate racemase [Zunongwangia profunda SM-A87] Length = 263 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 116/246 (47%), Gaps = 8/246 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +NSI IFDSGIGG + +++ L+P +Y+AD PYG + + +L Sbjct: 3 KNSIGIFDSGIGGTSIWREIHELLPFEDTVYLADSFNAPYGIKTREEIIELSRKNTIKLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNTA T +ELR+ F ++F+G PAIK AA +++ I IL+T TL Sbjct: 63 E-LGAKIIVVACNTATTNAINELRNEF-DVSFIGIEPAIKPAALQSRTKNIGILATKGTL 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + Y + V L +E KI E+ ++ + Sbjct: 121 SSSLFTKTSDLYTQGLKVIEVEGNGLVELIEAG----KIYSTEMDLLLDQLLAPLISQPI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHAL 250 D +VL C+HYP ++ ++ + +D+ +++AR+ + +L + N T + Sbjct: 177 DYLVLGCSHYPYLIPRLKEKFHPALSIIDSGEAVARQTKAILEKENLLNTDFQQKGTCTF 236 Query: 251 FLSGKP 256 + + P Sbjct: 237 YTNYDP 242 >gi|182416025|ref|YP_001821091.1| glutamate racemase [Opitutus terrae PB90-1] gi|177843239|gb|ACB77491.1| glutamate racemase [Opitutus terrae PB90-1] Length = 285 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 23/273 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL + +P Y ++++AD PYG + + + + D+ Sbjct: 2 IGVFDSGFGGLTVLASLLKTLPRYDYLFLADSARAPYGARSADVINEFTLEAVEWLFDQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYT----------- 118 P L V+ACNTA L+ P LG V P+++ A Sbjct: 62 CP-LVVLACNTASARALRNLQQLHLPAHRPDRRVLGVVRPSVEALAGLPPGAIPGETAPS 120 Query: 119 -QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 +G +++L T +T+ + + + + VE E ++ Sbjct: 121 LATGTVAVLGTASTIASDSYAIELQKLAPGLTLIQQPCPMWVPLVEAGELDGPGAEYFLR 180 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 + +E ++L CTHYPL++ R+L P V+ LD + +A R L R Sbjct: 181 RSLEPVL--NRAPLPQRLLLGCTHYPLLLPAIRRLVPASVEILDQGEIVATRLADWLQRH 238 Query: 238 NTHQTRVFDD--HALFLSGKPDIAMRRLMQGFG 268 H+ R+ + + P +R + G Sbjct: 239 RDHEARLTRNGTRRFVTTDDPAWFAQRGEKLLG 271 >gi|225619324|ref|YP_002720550.1| glutamate racemase [Brachyspira hyodysenteriae WA1] gi|225214143|gb|ACN82877.1| glutamate racemase [Brachyspira hyodysenteriae WA1] Length = 279 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 19/266 (7%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M ID+ I +FDSG+GGL VL+K+ +MP +++Y+ D+ PYG+ + Sbjct: 1 MNIDSL----SSNMPIAVFDSGLGGLTVLKKLIEMMPNENYVYIGDNANIPYGDKSKEEI 56 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQ 119 + + ++++ + +IACNT D L+ + + + + A+ A T+ Sbjct: 57 INLTLKMTDFLVEQK-CKMIIIACNTITACSYDILKQKY-HIPVIEVISNAVIDALDKTK 114 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + ISI++T T+ N I + Q + + L +E + + + +K Sbjct: 115 NNNISIMATEFTVNSNIYKNKIIEFNKQAKVTQTACKDLCPMIENDWYSYENRLEILKNY 174 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS-----PWPVDWLDNSDSIARRARCLL 234 +E K +D ++L CTHYP I++ ++L + +D S A A+ L Sbjct: 175 LEN-----IDKNSDTLILGCTHYPHIINDIKKLLENGIINSINNIIDPSYHTAISAKEYL 229 Query: 235 PRINTHQTRVFDDHA--LFLSGKPDI 258 N ++ +F + K + Sbjct: 230 KNNNLLSDNKIENSKTIIFSTEKSEK 255 >gi|77359223|ref|YP_338798.1| glutamate racemase [Pseudoalteromonas haloplanktis TAC125] gi|76874134|emb|CAI85355.1| glutamate racemase [Pseudoalteromonas haloplanktis TAC125] Length = 265 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 8/248 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I++FDSGIGG VL+ ++ +P+ + Y D+ PYG + RL L I Sbjct: 1 MSAHIMVFDSGIGGTTVLEHIQQSIPDAQYSYFMDNALLPYGAQSQQTIINRLCALIHFI 60 Query: 72 LDK-YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + L VIACNTA T +R ++ +G VPAIK AA TQS I +L+TPA Sbjct: 61 NQQALNVDLIVIACNTASTSALGAVRQ-ITTIPIVGVVPAIKPAAQLTQSKHIGLLATPA 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ YT LI + + + L SS+ L + E + ++ +E++ + Sbjct: 120 TISSPYTRTLIQEHTNNIAVSLYSSVELVTLAERLFFEQSLDTTKLHQELDRL---NIDQ 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA- 249 DV+VL CTH+P++ Q V LD+ +IA+R L+ ++N + D Sbjct: 177 SIDVLVLGCTHFPILAEPISQYFNRKVQLLDSGAAIAKRVHYLISQLNLTNNNIADTKKP 236 Query: 250 --LFLSGK 255 + + Sbjct: 237 LQYYATAS 244 >gi|167755834|ref|ZP_02427961.1| hypothetical protein CLORAM_01350 [Clostridium ramosum DSM 1402] gi|237734803|ref|ZP_04565284.1| glutamate racemase [Mollicutes bacterium D7] gi|167704773|gb|EDS19352.1| hypothetical protein CLORAM_01350 [Clostridium ramosum DSM 1402] gi|229382131|gb|EEO32222.1| glutamate racemase [Coprobacillus sp. D7] Length = 261 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 114/250 (45%), Gaps = 8/250 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I +FDSG+GGL VL +R L+P + IY+ D+ PYG L + Sbjct: 1 MERAIGVFDSGVGGLTVLNSIRTLLPNENIIYIGDNYHCPYGEKTREQLFSYASEIVEYF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + K L V+ACNT + +EL++ + + +G + A + +++T AT Sbjct: 61 I-KENVKLIVLACNTTSATVLNELQAVYKEVLIIGVIDATVEDFISRGVDNTLVIATAAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + I Y + + + + L VE I D + + ++ + Sbjct: 120 INSHKYPDTIDCYQTGIEVFTLPTPKLVPLVEAGMDKKDIY-DVLHEYLDSY-----AGK 173 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 I+L CTHYP++ + + + P ++++ +SD++ + R +L + N ++ Sbjct: 174 IKSIILGCTHYPILENQIKDILP-DIEYISSSDAVCKNVRDVLIKNNLLNLNKNKFIKIY 232 Query: 252 LSGKPDIAMR 261 +G+ D ++ Sbjct: 233 TTGRVDEFLK 242 >gi|329113332|ref|ZP_08242113.1| Glutamate racemase [Acetobacter pomorum DM001] gi|326697157|gb|EGE48817.1| Glutamate racemase [Acetobacter pomorum DM001] Length = 304 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 93/259 (35%), Positives = 141/259 (54%), Gaps = 5/259 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL FDSGIGGL +++ ++ L P Y+AD FPYG +D L +R++ L S + + Sbjct: 34 ILAFDSGIGGLGIVRAIQALAPNVCIDYLADTAIFPYGEQDDDFLIERIVSLLSQAIRRL 93 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 QP V+ACNTA TL + LR+ +P M F+G VP I+ AA TQ+ +I +L+T AT+RR Sbjct: 94 QPQAVVVACNTASTLALEALRAAWPDMPFVGCVPPIRWAARITQTKVIGLLATRATVRRP 153 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y S L Y +C + ++ LA E G + + I +EIEG F+ + R D + Sbjct: 154 YLSRLHALYAPECTLIAHAAPGLAGCAELAFRGQDVPDSTILREIEGLFVHPDSNRLDAV 213 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS-- 253 L CTHY +++ R LSP + WLD + ++AR LL + Q A F + Sbjct: 214 GLGCTHYTFVLNRLRALSPPGLTWLDPAPAVARHTCNLLA--HLPQKTHAHPCAWFTALP 271 Query: 254 -GKPDIAMRRLMQGFGLKS 271 + D A+ ++ +G + Sbjct: 272 DTQNDQALLTHLKPYGFSA 290 >gi|257468922|ref|ZP_05633016.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|317063170|ref|ZP_07927655.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|313688846|gb|EFS25681.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] Length = 263 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 11/262 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K SI +FDSG+GG VL+ M ++P + IY AD PYG L+ + Sbjct: 2 KKDYSIGVFDSGVGGTTVLKIMAEILPHENMIYYADSGNAPYGKKTVEELQSLCFNIMDF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L K + VIACNTA ++ + + +G + P K AA +++G I++L+TP Sbjct: 62 FL-KNRCKAVVIACNTATAAALTAIKERY-DIPVIGVITPGSKAAANISKNGHIAVLATP 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T I + + ++ L + +EE + + + + I Sbjct: 120 FTANSNAYGEEIKKFAKKASVYQEGCSELCTMIEEGWETFEDRGEILDGHISQF-----P 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDH 248 D +VL CTHYP+I + +D + L + ++ Sbjct: 175 GSADTLVLGCTHYPIIREDIEKYFSG--KIVDPARETVIELIESLRDEDMLNNSKEKGKI 232 Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270 F+SG + R + G + Sbjct: 233 EFFVSGDKEQFRRTAEKFLGFE 254 >gi|325104671|ref|YP_004274325.1| glutamate racemase [Pedobacter saltans DSM 12145] gi|324973519|gb|ADY52503.1| glutamate racemase [Pedobacter saltans DSM 12145] Length = 270 Score = 247 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 8/245 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I IFDSGIGGL V +R ++P+ IY D PYG+ A++ + + Sbjct: 3 AEQPIGIFDSGIGGLTVANAIRKVLPKEKIIYFGDTGHMPYGDKSPDAIRYYSLKI-GKF 61 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L++ + VIACNTA +L D+L + L + P + Q I ++ T Sbjct: 62 LEEKGCKVIVIACNTASSLAYDDLVQFMGDRIPILNVIDPVVHYVTDDMQYQKIGVIGTK 121 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ + + ++ +++ +LA +EE I IE + Sbjct: 122 ATISSDVYARKLKERNLGLQVNSLATPLLAPMIEEGFFENNISH----TVIESYLSSPQL 177 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DH 248 + D ++LACTHYPLI VD L+ + +A + L ++ + D Sbjct: 178 QNIDALILACTHYPLIKREIESFFNNQVDILNTASIVADDVKLQLEKLQLLNNQSLDYKD 237 Query: 249 ALFLS 253 ++S Sbjct: 238 EFYVS 242 >gi|103486695|ref|YP_616256.1| glutamate racemase [Sphingopyxis alaskensis RB2256] gi|123253315|sp|Q1GTU9|MURI_SPHAL RecName: Full=Glutamate racemase gi|98976772|gb|ABF52923.1| glutamate racemase [Sphingopyxis alaskensis RB2256] Length = 268 Score = 247 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 80/225 (35%), Positives = 116/225 (51%), Gaps = 1/225 (0%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 IL FDSG+GGL VL R L+P +Y AD G PYG + L R+ L Sbjct: 3 PPAPDAPILFFDSGLGGLSVLGPTRALLPTAPIVYAADYAGLPYGRKSNEELAARVPALL 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 ++++YQP L+VIACNTA T+ +R+ + +G VPAIK AA T+SG+I +L T Sbjct: 63 GRLVERYQPRLAVIACNTASTIALGHVRAAL-DLPIVGTVPAIKPAAEMTKSGVIGVLGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+R+ Y +L + + S L + E G + + I + + G + Sbjct: 122 EATVRQPYVDDLSARFAGGKTVLRHGSPGLVTGAEARLRGETVDPEVIARAVAGLRDQPR 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 G DV+VLACTH+PL+ + V +D ++ IARR L Sbjct: 182 GDAIDVVVLACTHFPLLKDELQAGFGRGVALIDGAEGIARRIAHL 226 >gi|71066509|ref|YP_265236.1| glutamate racemase [Psychrobacter arcticus 273-4] gi|71039494|gb|AAZ19802.1| glutamate racemase [Psychrobacter arcticus 273-4] Length = 330 Score = 247 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 10/238 (4%) Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61 +ID + I +FDSGIGGL V + +P +IY AD + PYGN + +K Sbjct: 37 EIDTKGIKADRSAPIGLFDSGIGGLSVYLHLAHQLPNERYIYYADTLHVPYGNRDSEDIK 96 Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 + L + L VIACN+A + R +P + +G VPA+K A ++SG Sbjct: 97 ALTLTAV-KWLHQQGCKLIVIACNSASAYALETARHHYPQLPIVGLVPALKPAVLASKSG 155 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 +++L+T ATL T +++I S + L VE ++++ Sbjct: 156 HVAVLATKATLNGTLLNDVITKIASPSATRVTKYFDPQLVPWVESGMPENSKTAQNLRQQ 215 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLL 234 ++ D +VL CTHYP Q + +D+ +IA R + LL Sbjct: 216 LQ----VFAKDGIDQLVLGCTHYPFFKDFLMQEIEEQKLSMQVVDSGQAIAERVKQLL 269 >gi|145629155|ref|ZP_01784954.1| glutamate racemase [Haemophilus influenzae 22.1-21] gi|144978658|gb|EDJ88381.1| glutamate racemase [Haemophilus influenzae 22.1-21] Length = 217 Score = 247 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 4/207 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R + Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++R Y LI + C + + + L E+ G + +K E+ + Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AD 178 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPW 215 D +VL CTH+PLI + P Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQ 205 >gi|315186198|gb|EFU19960.1| glutamate racemase [Spirochaeta thermophila DSM 6578] Length = 286 Score = 247 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 10/261 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +L DSGIGG+ L + F+YVAD FPYG L+ L+ L + +L Sbjct: 26 RPVLFLDSGIGGIPYLLWALNHIEGEEFVYVADRAHFPYGPRSHEELEAILVDLVAGLLR 85 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +++P L V+ACNTA + LR+ + ++ F+G VPAIK AA+ T++G++ +L+T TLR Sbjct: 86 RFRPKLVVLACNTASVVGLPALRARY-AIPFVGVVPAIKPAASLTRTGVVGLLATERTLR 144 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEIKKEIEGCFIEKEGKR 191 YT LI +Y + + V S + VE + + +++ ++ C + Sbjct: 145 DFYTDELIATYANGARVVKVPSPHIVEFVEHRFIDASGEERRTAVREAVDRCVA----QG 200 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D IVL CTH+ + R L+ V +D+ + + RR LL + + R + + Sbjct: 201 ADTIVLGCTHFVFLEAQIRSLAGEHVQVIDSREGVGRRLGHLLSYLPCGR-RGPSTASFY 259 Query: 252 LSGK--PDIAMRRLMQGFGLK 270 L+G+ P+ R + +GL Sbjct: 260 LTGRTPPEGRYLRFTRHYGLS 280 >gi|325290677|ref|YP_004266858.1| glutamate racemase [Syntrophobotulus glycolicus DSM 8271] gi|324966078|gb|ADY56857.1| glutamate racemase [Syntrophobotulus glycolicus DSM 8271] Length = 304 Score = 247 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 90/278 (32%), Gaps = 39/278 (14%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V++++ +P+ +Y D PYG+ + + ++ + Sbjct: 7 IGVFDSGVGGLTVVKQILASIPDARIVYFGDTARAPYGSRSKEEIIAFSSQIIPFLISQG 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V ACNT+ ++ F A T++G I +L+T T+ Sbjct: 67 A-DIIVAACNTSSANALPVIKKDFDLPIIGPIESGACLAVKMTRNGKIGLLATERTVASE 125 Query: 136 YTSNLIHS--------------------YVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + + + + +E D+ Sbjct: 126 AFHLAVTKVLTKGVRPLAEKSGASGQSGEKPISLVKSQACPLFVPLIEAGLA----DSDQ 181 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 + + D I+L CTHYP + L V +D + I R Sbjct: 182 ARNIVGMYLAPLTEAGVDTIILGCTHYPFLNSAITDLVGEKVVLVDPAVEIVSELRKAFK 241 Query: 236 RIN--------THQTRVFDDH------ALFLSGKPDIA 259 I +R +D F+SG P + Sbjct: 242 EIEKAEKEGSRRQNSREKEDQWKQGQVKYFVSGDPGLF 279 >gi|304407349|ref|ZP_07389002.1| glutamate racemase [Paenibacillus curdlanolyticus YK9] gi|304343790|gb|EFM09631.1| glutamate racemase [Paenibacillus curdlanolyticus YK9] Length = 264 Score = 247 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 9/243 (3%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I FDSGIGGL VL + +P ++Y+AD + PYG +K + ++ + Sbjct: 2 TIGFFDSGIGGLSVLAESLRRLPAQDYLYMADTLHVPYGTKTKEEVKDYVFEAVERMMSR 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATL 132 VIACNTA ++ ++LR+T+ S+ +G PA+K A + + +++T TL Sbjct: 62 G-IDALVIACNTATSIAVEDLRATY-SLPIVGMEPAVKPAVEMNRATGKRVLVMATQLTL 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+ + + L E ++ E+ + E+ +++ G Sbjct: 120 QLPKYYALVSRVDEGGIVDSLPLPGLVRYCESLQFDPQVMEEYFRAELAPYNLDEYG--- 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 + VL CTHYP ++ R + P + +D + +R LL R + R Sbjct: 177 -IFVLGCTHYPFYRNILRAMLPPHIQIVDGNAGTVKRLSALLNRFGI-EGRGHGHVDFMC 234 Query: 253 SGK 255 +G Sbjct: 235 TGN 237 >gi|16079734|ref|NP_390558.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168] gi|221310614|ref|ZP_03592461.1| hypothetical protein Bsubs1_14656 [Bacillus subtilis subsp. subtilis str. 168] gi|221314937|ref|ZP_03596742.1| hypothetical protein BsubsN3_14572 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319859|ref|ZP_03601153.1| hypothetical protein BsubsJ_14488 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324139|ref|ZP_03605433.1| hypothetical protein BsubsS_14627 [Bacillus subtilis subsp. subtilis str. SMY] gi|11387238|sp|O05412|MURI2_BACSU RecName: Full=Glutamate racemase 2 gi|1934638|gb|AAB80890.1| YrpC [Bacillus subtilis subsp. subtilis str. 168] gi|2635126|emb|CAB14622.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168] Length = 265 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 9/241 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKEYI-FNAAEFLASQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133 VIACNTA ++ ++LR F +G PA+K A + + +++T TL+ Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NL+ + ++ L E + ED+I K ++ + K+ Sbjct: 121 EEKFHNLVKEIDHHDLVDCLALPGLVEFAENF----DFSEDKIIKYLKNELSSFDLKQYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTH+P + F +L VD + S A++ + +L N + F S Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFNS 235 Query: 254 G 254 G Sbjct: 236 G 236 >gi|310641730|ref|YP_003946488.1| glutamate racemase 2 [Paenibacillus polymyxa SC2] gi|309246680|gb|ADO56247.1| Glutamate racemase 2 [Paenibacillus polymyxa SC2] Length = 284 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 14/260 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL + +P +F+Y+AD + PYG + + IL K Sbjct: 20 IGFFDSGLGGITVLSEALRRLPNENFVYMADTLHVPYGTKTPQEVLGYVKASVQTIL-KE 78 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133 VIACNTA ++ ELR + +G PA+K A + + +L+TP TL+ Sbjct: 79 DIKALVIACNTATSIAVAELRKEYK-FPIIGMEPAVKPAVEMNRANGKRVLVLATPLTLK 137 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 ++ + L+ + + L E+ + E+ Sbjct: 138 QSGYAALVSRVDDHGSVDSLPLPELVQYCEQ----LNFDRTELFNYFNHKLSSFNLDIYG 193 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV------FDD 247 +VL CTHYP + R+L P + +D S +R + +L N + V Sbjct: 194 TVVLGCTHYPFYKEILRELLPSHIQLIDGSHGTVKRLKQVLSERNLLASPVKVGQPQEGH 253 Query: 248 HALFLSGKPDIAMRRLMQGF 267 + + + + ++ + Sbjct: 254 VTFLCTSQDETYVHKMERAL 273 >gi|119472793|ref|ZP_01614730.1| glutamate racemase [Alteromonadales bacterium TW-7] gi|119444752|gb|EAW26057.1| glutamate racemase [Alteromonadales bacterium TW-7] Length = 261 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 8/242 (3%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI-LDKYQ 76 +FDSGIGG VL ++ +P + Y D+ PYG + RL L I L+K Sbjct: 2 VFDSGIGGTTVLDHIKQRIPNAQYSYFMDNAFLPYGAQTQQTIINRLCSLIHFIKLNKLN 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L VIACNTA T +R + +G VPAIK AA T+S I++L+TPAT+ +Y Sbjct: 62 VDLIVIACNTASTSALSAVR-KITDIPIVGVVPAIKPAAELTRSNHIALLATPATIASSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T+ LI + S ++L SS+ L + E + +++ +EG IE K+TDV+V Sbjct: 121 TNKLIAQHASNVTVNLYSSVELVNLAELLFFNGYLDTNKLHAVLEGLNIE---KQTDVLV 177 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD---DHALFLS 253 L CTH+P++ + + +D+ +IA R LL + + + Sbjct: 178 LGCTHFPILTKQISEHFKNSIQLVDSGAAIANRVIYLLTESGLLAQNIPGIKKPLQYYAT 237 Query: 254 GK 255 Sbjct: 238 AN 239 >gi|254562390|ref|YP_003069485.1| glutamate racemase [Methylobacterium extorquens DM4] gi|254269668|emb|CAX25640.1| glutamate racemase [Methylobacterium extorquens DM4] Length = 291 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 108/263 (41%), Positives = 155/263 (58%), Gaps = 3/263 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + Sbjct: 18 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVME 77 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP Sbjct: 78 RLLLRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATP 136 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188 T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E + Sbjct: 137 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVTDAAILAEIAPCFVEGPD 196 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 G RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H Sbjct: 197 GARTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 256 Query: 249 ALFLSGKP-DIAMRRLMQGFGLK 270 A+F G + A+ R ++ GL Sbjct: 257 AVFTGGAGLNPALGRSLERRGLS 279 >gi|167626313|ref|YP_001676813.1| glutamate racemase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668746|ref|ZP_04756324.1| glutamate racemase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877277|ref|ZP_05249987.1| glutamate racemase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596314|gb|ABZ86312.1| Glutamate racemase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254843298|gb|EET21712.1| glutamate racemase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 265 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 18/249 (7%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSGIGGL V++ + ++P IY D PYG ++K ++ Sbjct: 4 NRPIGVFDSGIGGLTVVKNLMNILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 D+ + +IACNT + KD ++ ++ + + A ++ + +++TPAT+ Sbjct: 64 DQ-EVKAIIIACNTISAIAKDIVQEIAKTVPVIDVISAGVSLVDSLKT--VGVIATPATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + IH ++ S + S +EE ++ E K+ +E K Sbjct: 121 NSNAYALQIHKNNPSTEVYSSSCGLFVSMIEEGFIEGEVVELVAKQYLEY----FNDKNI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-----INTHQTRVFDD 247 ++L CTHYP+I + V +D S +A +L + ++ + Sbjct: 177 QALILGCTHYPIIKDSIAKAL--DVKLIDPSL----QASKMLQQLLVENNLLNKNNSNPE 230 Query: 248 HALFLSGKP 256 + +++ P Sbjct: 231 YKFYVTDIP 239 >gi|288959026|ref|YP_003449367.1| glutamate racemase [Azospirillum sp. B510] gi|288911334|dbj|BAI72823.1| glutamate racemase [Azospirillum sp. B510] Length = 299 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 107/281 (38%), Gaps = 21/281 (7%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++L+ I +FDSG GGL VL+ + P F+Y+ D PYG + + + + Sbjct: 15 RRLKQLIGVFDSGHGGLTVLRALVDAAPGRPFVYLGDHAAAPYGPRSEDDIYRLTIAGMD 74 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAVPAIKQAAA-------- 116 + + L VIACNTA + L+ + P LG + + +A Sbjct: 75 RLFAQG-CRLVVIACNTAAAVALRRLQQEWLPSAHPGRNVLGVLVPMVEAITRVPWMIDT 133 Query: 117 -----YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 + + I +T AT+ I + + L +E A +I Sbjct: 134 VPPDHLAEPRTVGIFATLATVNSGSFPREIGKRAPSVRVVQQACPDLVPLIERGAADGEI 193 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 E + + + + D +VL CTHYPL+ H+F + P V+ L AR Sbjct: 194 -EPAVAGYVRVLLDKLGRQPLDAVVLGCTHYPLVRHLFARALPPGVEILSQPTLTARSLE 252 Query: 232 CLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLMQGFGLKS 271 R ++ + D F +G + + FG + Sbjct: 253 QYFGRHPEYRPDPAEHDLKFFTTGDAALVSELAGRFFGHPT 293 >gi|321312180|ref|YP_004204467.1| glutamate racemase [Bacillus subtilis BSn5] gi|320018454|gb|ADV93440.1| glutamate racemase [Bacillus subtilis BSn5] Length = 265 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 9/241 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKEYI-FNAAEFLASQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133 VIACNTA ++ ++LR F +G PA+K A + + +++T TL+ Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NL+ + ++ L E + ED+I K ++ + K+ Sbjct: 121 EEKFHNLVKEIDHHDLVDCLALPGLVEFAENF----DFSEDKIIKYLKNELSSFDLKQYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTH+P + F +L VD + S A++ + +L N + F S Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFNS 235 Query: 254 G 254 G Sbjct: 236 G 236 >gi|312898722|ref|ZP_07758111.1| glutamate racemase [Megasphaera micronuciformis F0359] gi|310620153|gb|EFQ03724.1| glutamate racemase [Megasphaera micronuciformis F0359] Length = 270 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 7/258 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I +FDSG+GGL V+ K+R L+P IYV D PYG + + + + Sbjct: 6 KAEQPIGVFDSGVGGLTVVNKLRHLLPHEDIIYVGDTKRNPYGTRTQNEILTFTEQIIA- 64 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L++ Q L V ACNTA + ++R ++ LG I+ A + I++ +TP Sbjct: 65 FLERRQVKLIVFACNTATAVAYMKMREKTKTL-LLGMSRGIETARHISTENRIAVFATPL 123 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + I LA+ +E ++ +E+++ + Sbjct: 124 TIANHVHRDEAAQLDPSLTIVEQPCASLAALIERG----QLNTEEMRQAVTADTKPVLEA 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 D + CTHYP + +F ++ + ++D + A +A +L + + Sbjct: 180 HVDTAIFGCTHYPFVQPLFEEICGDSIVFVDPAHETALQASAILKKEGLLNGQKERGRLR 239 Query: 250 LFLSGKPDIAMRRLMQGF 267 L + + + Sbjct: 240 LCFTAEVQRGQKLAAHLL 257 >gi|240950246|ref|ZP_04754526.1| glutamate racemase [Actinobacillus minor NM305] gi|240295247|gb|EER46046.1| glutamate racemase [Actinobacillus minor NM305] Length = 253 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 6/251 (2%) Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 +GGL + ++R ++P H++Y D+ FPY + AL +R + + I +K L V+ Sbjct: 1 MGGLTIYDEVRKVLPNAHYLYCFDNAFFPYSEKSEQALIERAVKIVQKIAEKQPLDLVVV 60 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 ACNTA T++ LR F +G VPAIK AAA +++ I +L+T T++R Y +LIH Sbjct: 61 ACNTASTVVLPALRERF-DFPIVGTVPAIKPAAAISKTKTIGLLATVGTIKRPYVLDLIH 119 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 Y C + + + + E + +K+ +E D ++L CTH+ Sbjct: 120 RYAKDCQVEKIGNTQIVELAETKLLTGSVDLFSLKECVEPWL---NHPTLDTVILGCTHF 176 Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262 PL+ +QL P ++D+ ++IA+R + LL + H ++ F + + R Sbjct: 177 PLLKEELKQLLPQVTYFVDSGEAIAKRVQSLLLENHHHSQEKERENTAFCTELTENFKNR 236 Query: 263 --LMQGFGLKS 271 +M G KS Sbjct: 237 EVMMHKLGFKS 247 >gi|75675509|ref|YP_317930.1| glutamate racemase [Nitrobacter winogradskyi Nb-255] gi|74420379|gb|ABA04578.1| glutamate racemase [Nitrobacter winogradskyi Nb-255] Length = 271 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 97/264 (36%), Positives = 146/264 (55%), Gaps = 9/264 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 +IL+ DSG+GGL VL+++ +P +IYVADD FPYG + + R++ L +++ Sbjct: 4 SPTILVLDSGLGGLTVLREIVNALPAARYIYVADDAFFPYGRLSEEDIIARVVPLVGELI 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + P + VIACNT + LR+ +P+ F+G VPAIK A A +++ +S+L T AT+ Sbjct: 64 GAHAPDIVVIACNTMSVSVLGPLRAAYPA-PFVGTVPAIKPACAASKTKRVSVLGTRATV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR- 191 +R YT LI ++ C + LV + LAS E+ G + + +I EI CF+ Sbjct: 123 QREYTQALIRNHAQACTVTLVGAARLASLAEDALSGKLVSDADILSEITPCFVPAGEGGG 182 Query: 192 --TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248 TD +VLACTHYPL++ +L+PWPV W+D + +IARR LL + DH Sbjct: 183 LRTDAVVLACTHYPLLLDRLLRLAPWPVSWIDPAPAIARRVVDLLGLLGPLAPNTAGDHD 242 Query: 249 ----ALFLSGKPDIAMRRLMQGFG 268 +F SG+ L FG Sbjct: 243 RPPEMIFTSGRSRTLADALAPFFG 266 >gi|293115464|ref|ZP_05791593.2| glutamate racemase [Butyrivibrio crossotus DSM 2876] gi|292809801|gb|EFF69006.1| glutamate racemase [Butyrivibrio crossotus DSM 2876] Length = 280 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 5/242 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + +FDSG+GG+ VL ++ LMP +FIY D PYG + + + ++ Sbjct: 25 RPVGVFDSGVGGISVLSELVKLMPYENFIYFGDSANAPYGTKPLDKVAELTIHTADMLIA 84 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K VIACNTA +R+ +P++ +G PA+K AA I +L+T TL Sbjct: 85 KG-CKCLVIACNTATVAAVSRIRNMYPAIPVIGIEPALKPAALDNPGKRILVLATHITLN 143 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 ++ NL+ Y I + + + VE+ E ++ E D Sbjct: 144 QSKFLNLMTRYKDLADIFTLEAPGIVEAVEKGLT----DSQEFMDYLKNLLHEYIDNPVD 199 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + + + D + AR L + V FL+ Sbjct: 200 AVVLGCTHYPFVKRQILEALQYTPAVYDGGNGTARETLHQLTMHSIVSHSVSKGTIEFLN 259 Query: 254 GK 255 Sbjct: 260 SD 261 >gi|47776279|dbj|BAD20743.1| glutamate racemase [Bacillus subtilis] Length = 265 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 9/241 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGRVKEYI-FNAAEFLASQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133 VIACNTA ++ ++LR F +G PA+K A + + +++T TL+ Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NL+ + ++ L E + ED+I K ++ + K+ Sbjct: 121 EEKFHNLVKEIDHHDLVDCLALPGLVEFAENF----DFSEDKIIKYLKNELSSFDLKQYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTH+P + F +L VD + S A++ + +L N + F S Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFDS 235 Query: 254 G 254 G Sbjct: 236 G 236 >gi|291485080|dbj|BAI86155.1| putative glutamate racemase [Bacillus subtilis subsp. natto BEST195] Length = 265 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 9/241 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGRVKEYI-FNAAEFLASQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133 VIACNTA ++ ++LR F +G PA+K A + + +++T TL+ Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NL+ + ++ L E + ED+I K ++ + K+ Sbjct: 121 EEKFHNLVKEIDHHDLVDCLALPGLVEFAENF----DFSEDKIIKYLKNELSSFDLKQYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTH+P + F +L VD + S A++ + +L N + F S Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFDS 235 Query: 254 G 254 G Sbjct: 236 G 236 >gi|302391765|ref|YP_003827585.1| glutamate racemase [Acetohalobium arabaticum DSM 5501] gi|302203842|gb|ADL12520.1| glutamate racemase [Acetohalobium arabaticum DSM 5501] Length = 250 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 9/252 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GG+ VL++ ++P +IY AD PYG +K + I D+ Sbjct: 3 IGFFDSGVGGITVLKEALKVLPNKDYIYYADTANVPYGTKPKEEVKHYVFDAVDFITDQG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA ++ ++LR F +G PA+K A ++ + + +TP TL+ Sbjct: 63 -INALVIACNTATSVAVNDLRDEF-QFPIIGMEPAVKPAVEKNKTKKVLVTATPLTLQEE 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ S+ I + L E + E+ I +E F + R I Sbjct: 121 KLWELVAKIGSKDIIDSLPLPKLVEFAENFI----FDEETILSYLEERFSSYDLNRYSSI 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ +FR++ P V+ +D + ++ + L + + +F S K Sbjct: 177 VLGCTHFIFYRRLFRKIIPDDVEIIDGNRGAVKQLKRQLK---APEHKSGTGEIIFYSSK 233 Query: 256 PDIAMRRLMQGF 267 ++ + Sbjct: 234 KGNEDNIALREY 245 >gi|240139965|ref|YP_002964442.1| glutamate racemase [Methylobacterium extorquens AM1] gi|240009939|gb|ACS41165.1| glutamate racemase [Methylobacterium extorquens AM1] Length = 291 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 108/263 (41%), Positives = 155/263 (58%), Gaps = 3/263 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + Sbjct: 18 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVME 77 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP Sbjct: 78 RLLLRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATP 136 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188 T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E + Sbjct: 137 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGAD 196 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 G RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H Sbjct: 197 GARTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 256 Query: 249 ALFLSGKP-DIAMRRLMQGFGLK 270 A+F G + A+ R ++ GL Sbjct: 257 AVFTGGAGLNPALGRSLERRGLS 279 >gi|119476761|ref|ZP_01617071.1| glutamate racemase [marine gamma proteobacterium HTCC2143] gi|119450017|gb|EAW31253.1| glutamate racemase [marine gamma proteobacterium HTCC2143] Length = 280 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 94/267 (35%), Positives = 137/267 (51%), Gaps = 6/267 (2%) Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 P + IL+FDSG+GGL ++Q +R +P Y+AD++ FPYG +D L R Sbjct: 10 RPAMINAPH-ILVFDSGVGGLSIVQHIRLHVPHATITYLADNLFFPYGVLDDQTLLSRTC 68 Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125 + S + YQP L V+ACN+A TL+ LR+ VPAIK AAA + + +I + Sbjct: 69 EIVSWAHNHYQPSLIVLACNSASTLVLPHLRAILGVPVVG-VVPAIKPAAAMSTTNVIGL 127 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 L+TPAT++R YT LI + C + V S L VE G+K E+EIK + Sbjct: 128 LATPATIQRDYTDELIAEFAPHCEVIKVGSAALVDFVERKMAGLKPTENEIKHILSLFNQ 187 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTHQTRV 244 D +VLACTH+PL+ +P W+D+ D++ARR LL + + Sbjct: 188 HPRWSSVDTVVLACTHFPLVKRELSDAAPSIKHWVDSGDAVARRVTSLLTSLPGELSSGA 247 Query: 245 FDDHALFL--SGKPDIAMRRLMQGFGL 269 + LF SG D ++ +Q FG Sbjct: 248 AVNRILFTSSSGITDTF-KKGLQPFGF 273 >gi|253573395|ref|ZP_04850738.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846923|gb|EES74928.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14] Length = 260 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 10/255 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGGL VL + +P F+Y AD + PYG +K+ + S ++ + Sbjct: 3 IAFFDSGIGGLTVLTEAMRKLPNEDFLYFADTLHVPYGTKTLPEVKRYVEESVS-LIMQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133 V+ACNTA + +ELR T+ + +G PA+K A +Q + + +T TL Sbjct: 62 DIKALVVACNTATSAAIEELRRTY-DIPIVGMEPAVKPAVKRSQAAGKRVLVFATSLTLS 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + ++L+ + + L E+ ++ DEI++ + + Sbjct: 121 LSKYTDLVARVDDHKVVDSMPLPELVQYCEQ----LQFDRDEIERYFSRKLAGIDLSQYS 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF-L 252 IVL CTH+P + +Q+ P ++ +D S R L+ + + + F H F Sbjct: 177 TIVLGCTHFPYYKSILQQILPPHIELIDGSHGTVERLCSLIG-SSANPGQAFKGHIEFKC 235 Query: 253 SGKPDIAMRRLMQGF 267 S + + ++ + Sbjct: 236 SDENPAYLDKMARAL 250 >gi|58040425|ref|YP_192389.1| glutamate racemase [Gluconobacter oxydans 621H] gi|58002839|gb|AAW61733.1| Glutamate racemase [Gluconobacter oxydans 621H] Length = 281 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 85/255 (33%), Positives = 125/255 (49%), Gaps = 2/255 (0%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSGIGG+ V+Q +R L+P H Y+AD FPYG D L R++ L ++ Q Sbjct: 13 LVFDSGIGGMGVVQALRDLLPALHIDYLADTALFPYGEQPDDLLTSRIVSLLVAACERLQ 72 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 P + VIACNTA T+ LR ++ +G VP I+ A ++S +I +LST AT RR Y Sbjct: 73 PDVLVIACNTASTIALPALRQRL-NIPVVGCVPPIRWAGRVSESRVIGLLSTSATARRPY 131 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 L + C + + LA E G I + +++ E+ F + G D + Sbjct: 132 ILQLHRDFAPDCRLITHGARRLADLAERAFLGEPIADSDVQYELTCLFSQPHGGEIDTVG 191 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHY ++ F +LSP + WLD + ++AR+ R +L L Sbjct: 192 LGCTHYTFLMDAFERLSPPGITWLDPAPAVARQVRTVLQDAPCSSAPSRPGRLLMTCAPQ 251 Query: 257 DIA-MRRLMQGFGLK 270 DIA + Q G Sbjct: 252 DIARLETAAQRLGFS 266 >gi|294011705|ref|YP_003545165.1| glutamate racemase [Sphingobium japonicum UT26S] gi|292675035|dbj|BAI96553.1| glutamate racemase [Sphingobium japonicum UT26S] Length = 267 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 3/260 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 Q +L FDSG+GGL +L + +P +Y AD GFPYG + + R+ L + Sbjct: 5 PQAPLLFFDSGVGGLSILAPAQAALPHAPVVYAADSAGFPYGTRSEAEIAARVPALLGRL 64 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++Y+P L+VIACNTA T+ +R+ + +G VPAIK AA +QS + +L T AT Sbjct: 65 VERYRPRLAVIACNTASTIALSAVRAAL-DIPVVGTVPAIKPAALLSQSRVFGVLGTDAT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R+ Y L + S C + S L E G + + + G F + G R Sbjct: 124 VRQPYVDRLAAEHGSDCTVLRHGSAALVQLAEAKLRGEPLDPAVARDALAGLFDQPGGDR 183 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D++VLACTH+PL+ SP P+ ++ + IARR L + + A+F Sbjct: 184 MDIVVLACTHFPLVEAELAAASPRPLRFVHGGEGIARRI-AYLTQGQPWPSEPQPGTAVF 242 Query: 252 LSGKPDIA-MRRLMQGFGLK 270 + +R ++ +GL Sbjct: 243 TRLDESVERLRPALESYGLP 262 >gi|312870481|ref|ZP_07730601.1| glutamate racemase [Lactobacillus oris PB013-T2-3] gi|311094038|gb|EFQ52362.1| glutamate racemase [Lactobacillus oris PB013-T2-3] Length = 266 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 6/243 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL VL+ +R +P+ ++V D FPYG +++ + + ++ Sbjct: 3 RRPIGVMDSGLGGLSVLRVLRRELPDESLLFVGDQGHFPYGTKTQAEVRRLALAIGRFLV 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA L++ + +G + AA T I ++ T +T+ Sbjct: 63 -RHDAKLMVVACNTATGAALPALQAA-LPIPVIGVIRPGASAALATNPRTIGVIGTDSTI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +H + + L S VE G + + K ++ CF + Sbjct: 121 KNGAYERTLHELQPAVQVVSQPAQPLVSIVEHGQTGTPAAQQAVDKVLQ-CFAT---QPV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 + ++L CTH+P + ++ V +D + + + +L + AL+ Sbjct: 177 ETLILGCTHFPFLSREIQRRLGPSVHLIDPAYETGQTVKQVLTDKHLLAAGGQQRTALYT 236 Query: 253 SGK 255 +G+ Sbjct: 237 TGR 239 >gi|304439446|ref|ZP_07399355.1| glutamate racemase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372042|gb|EFM25639.1| glutamate racemase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 267 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 12/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG+ VL+++ ++P+ +IY D PYG ++ F+ +D+ Sbjct: 4 IGIFDSGVGGVSVLKELLKVLPDEEYIYYCDQKNLPYGEKTPGEIRNLTKTSFN-FIDRQ 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134 + VIACNTA + L++ F G + I + T++ I I++T +T+ Sbjct: 63 NVDMVVIACNTATANAERYLKAIF-GFPIFGIIRSGISEIVKATKNNKILIIATESTVEN 121 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I S V + L VE+ ++ +K+ +E D Sbjct: 122 GIYQEKIKSLVPNADVRAKGCSNLVRAVEDGHIDDELAVQVVKEYLEEY----RDFEFDT 177 Query: 195 IVLACTHYPLIVHVFRQL---SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 +VL CTH+PL ++ V +D + S+A L + R L+ Sbjct: 178 LVLGCTHFPLARPAIEKVLEEMDKEVTIVDPAKSLAETVSEFLQDRDFENKR--SGIKLY 235 Query: 252 LS 253 S Sbjct: 236 TS 237 >gi|218531473|ref|YP_002422289.1| glutamate racemase [Methylobacterium chloromethanicum CM4] gi|218523776|gb|ACK84361.1| glutamate racemase [Methylobacterium chloromethanicum CM4] Length = 286 Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 107/263 (40%), Positives = 154/263 (58%), Gaps = 3/263 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + Sbjct: 13 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEERLVARVIAVME 72 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP Sbjct: 73 RLLLRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATP 131 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188 T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E + Sbjct: 132 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGAD 191 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 G TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H Sbjct: 192 GACTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 251 Query: 249 ALFLSGKP-DIAMRRLMQGFGLK 270 A+F G + A+ R ++ GL Sbjct: 252 AVFTGGAGLNPALGRSLERRGLS 274 >gi|4511996|gb|AAD21556.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4] Length = 224 Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 77/209 (36%), Positives = 114/209 (54%), Gaps = 1/209 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL F+SG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L + Sbjct: 1 MSRPILFFNSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R+ Y +L + S C + S L + E G K + E++ + EG R Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDR 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWL 220 DV+VLACTH+PL+ +SP P L Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPAPCYLL 208 >gi|163852632|ref|YP_001640675.1| glutamate racemase [Methylobacterium extorquens PA1] gi|163664237|gb|ABY31604.1| glutamate racemase [Methylobacterium extorquens PA1] Length = 291 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 107/263 (40%), Positives = 154/263 (58%), Gaps = 3/263 (1%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + Sbjct: 18 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVME 77 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP Sbjct: 78 RLLLRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATP 136 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188 T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E + Sbjct: 137 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGAD 196 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 G TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H Sbjct: 197 GAYTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 256 Query: 249 ALFLSGKP-DIAMRRLMQGFGLK 270 A+F G + A+ R ++ GL Sbjct: 257 AVFTGGAGLNPALGRSLERRGLS 279 >gi|300869685|ref|YP_003784556.1| glutamate racemase [Brachyspira pilosicoli 95/1000] gi|300687384|gb|ADK30055.1| glutamate racemase [Brachyspira pilosicoli 95/1000] Length = 267 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 109/258 (42%), Gaps = 13/258 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG GG+ VL+K+ ++P ++IY+ D+ PYG+ + + + + ++ Sbjct: 5 SKPIAVFDSGFGGISVLKKLLNILPNENYIYLGDNHNIPYGDKSKEEITQLSIKILDFLI 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPAT 131 K ++VIACNT D L+ + ++ + + ++ T++ ISI++T T Sbjct: 65 -KQNCKMAVIACNTITASSYDVLKEKY-NIPIIEIISNGVEDIIDNTKNNNISIMATEFT 122 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + I Y + + V+ L +E + + +++K Sbjct: 123 VHSNMYHDKILDYNDKIKVTQVACQKLCPMIENNWYSYDD-----RILVLEEYVKKIDDN 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD----WLDNSDSIARRARCLLPRINTHQTRVFDD 247 +D ++LACTHYP I+ + + +D S IA + L N T Sbjct: 178 SDTLLLACTHYPFIIDDIKSVVNRKKTNIKNIIDPSTKIALSIKKYLIDNNLLNT-SGGK 236 Query: 248 HALFLSGKPDIAMRRLMQ 265 F +G + + Sbjct: 237 LKFFTTGDKKDFNDFVSR 254 >gi|296125119|ref|YP_003632371.1| glutamate racemase [Brachyspira murdochii DSM 12563] gi|296016935|gb|ADG70172.1| glutamate racemase [Brachyspira murdochii DSM 12563] Length = 275 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 114/255 (44%), Gaps = 13/255 (5%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG GGL VL+++ L+P ++IY+ D++ PYG+ + + + ++ K Sbjct: 11 PIAVFDSGFGGLTVLKQLLQLLPNENYIYLGDNINIPYGDKSEEEIINLTSKMVEFLISK 70 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPATLR 133 ++ IACNT + L+ + + + + + A T++ IS+++T T+ Sbjct: 71 KCKIII-IACNTISACAYNILKQKY-DIPIIEVISNGVADALNKTKNNNISVMATEFTVH 128 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 N I+ + + I +S L +E + D +K ++ ++D Sbjct: 129 SNVYKNKINKHNKESKITQISCKELCPMIENDWYSYDNRLDVLKNYLKN-----IDDKSD 183 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVD-----WLDNSDSIARRARCLLPRINTHQTRVFDDH 248 ++LACTHYP I+ ++ + V +D + + + L + N T +D Sbjct: 184 TLILACTHYPHIIDDIKKTLEYNVKNSIKNIIDPAYHTSMSVKEYLEKNNLINTDKTNDI 243 Query: 249 ALFLSGKPDIAMRRL 263 ++ + + + + Sbjct: 244 TIYTTASVEKEEKII 258 >gi|85373785|ref|YP_457847.1| glutamate racemase [Erythrobacter litoralis HTCC2594] gi|84786868|gb|ABC63050.1| glutamate racemase [Erythrobacter litoralis HTCC2594] Length = 256 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 6/256 (2%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FD+G+GGL VL ++R ++P IY AD G PYG + + R+ L + ++YQP Sbjct: 1 MFDTGVGGLTVLAELRKVLPNAPVIYAADYAGLPYGTKTEAEVAARVCGLLGRMSERYQP 60 Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R+ Y Sbjct: 61 RAICIACNTASTIALGMVREVL-EVPIIGTVPAIKPAAAMTETGVIGLLGTAATVRQPYV 119 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L + S + ++ L E G + + ++ E+ + R D +VL Sbjct: 120 DRLEAEFASDTVLIRFAASGLVDLAEAKLRGETVGTNSLRAEVRALLEAENADRIDTLVL 179 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 ACTH+PL+ Q+ V + ++ IARR + R D +G Sbjct: 180 ACTHFPLLEEELLQVFGPQVRMVHGAEGIARRIAAV--THGQQFARTTPD-RFITTGSAK 236 Query: 258 IAMRRL--MQGFGLKS 271 A + +GL S Sbjct: 237 DAADLAHCLSQYGLDS 252 >gi|332977227|gb|EGK14022.1| glutamate racemase [Psychrobacter sp. 1501(2011)] Length = 352 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 10/234 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V +R +P H++Y AD + PYG +K + ++ Sbjct: 18 SAPIGIFDSGVGGLSVYLHLRQQLPNEHYLYYADTLNVPYGPRSSAEIKVLSLIAVDWLV 77 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 L VIACN+A R P + +G VPA+K A + S +++L+T ATL Sbjct: 78 AAG-CKLIVIACNSASAHALPHARQKHPHIPIVGLVPALKPAVLNSNSKNVAVLATKATL 136 Query: 133 RRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + +I Y + ++ L VE + +K +++ + Sbjct: 137 DGELLNTVISDYALPANVNVMKWFDPNLVPWVEAGMPLDSETPERLKCQLKR----FAEQ 192 Query: 191 RTDVIVLACTHYPLIVH-VFRQLSPW--PVDWLDNSDSIARRARCLLPRINTHQ 241 R D +VL CTHYP V ++ + +D+ +IA R + LL + + Sbjct: 193 RVDHLVLGCTHYPFFREFVLAEVESENLGIKVVDSGAAIAARVKALLQQFQSLA 246 >gi|302672271|ref|YP_003832231.1| glutamate racemase MurI [Butyrivibrio proteoclasticus B316] gi|302396744|gb|ADL35649.1| glutamate racemase MurI [Butyrivibrio proteoclasticus B316] Length = 272 Score = 244 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 6/219 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL VL + +P +I+ AD PYG + + + ++DK Sbjct: 3 IGIFDSGIGGLSVLHEAYHRLPGQEYIFYADTDHVPYGTKTPEQIVEFAIDNAQFLIDKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA ++ ELRS F + LG PA+K A T I +++TP T+R Sbjct: 63 AEAL-VVACNTATSVAIKELRSRF-DIPILGMEPAVKPAVEGTDDKRIMVIATPVTIRED 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L+H + + L++ L E+ + +E+ I G F + + Sbjct: 121 KLKDLLHRVDEEHRVDLLAMPRLVEFAEK----EQFDTEEVVGYIRGRFANFDPTDYCAL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+ V +D + +L Sbjct: 177 VLGCTHFNYFKPVLEDFFGKDTLLVDGNYGTVHHLADVL 215 >gi|261408244|ref|YP_003244485.1| glutamate racemase [Paenibacillus sp. Y412MC10] gi|261284707|gb|ACX66678.1| glutamate racemase [Paenibacillus sp. Y412MC10] Length = 258 Score = 244 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 8/256 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GGL VL +P F+++AD + PYG +K + I+ + Sbjct: 3 IAFFDSGLGGLTVLTAAMKKLPHEDFLFLADTLHVPYGTKAKEDVKAYIHQAMETIM-QE 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133 + V+ACNTA ++ +LR +P + +G PA+K A + I +L+TP TL+ Sbjct: 62 EVKAIVVACNTATSMAISDLRKAYP-IPVIGMEPAVKPAVEINRASGKRILVLATPLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + +L+ S + L E + + + F + Sbjct: 121 ESKYKDLVRRVDSMHIVDSQPLPELVEHCEA----LNFDPEIMNAYFTKKFEAFDLNEYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTHYP + L P + +D S+ R +L + + D L S Sbjct: 177 TIVLGCTHYPFYKRILSDLLPDHIRIIDGSEGTVNRLIQVLSDQDLLSSSGSQDVKLLNS 236 Query: 254 GKPDIAMRRLMQGFGL 269 + +++ + + Sbjct: 237 SQSAEYTQKMEKALSI 252 >gi|323142469|ref|ZP_08077289.1| glutamate racemase [Phascolarctobacterium sp. YIT 12067] gi|322413046|gb|EFY03945.1| glutamate racemase [Phascolarctobacterium sp. YIT 12067] Length = 267 Score = 244 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 6/242 (2%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I + DSG+GGL VL+ + ++P FIYV D PYG + ++ + + + Sbjct: 5 QPIGVLDSGVGGLSVLKCLHQMLPYEDFIYVGDTARTPYGTRSEQEIRGFVGEIIDWLAA 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K VIACNT L D LR T P +G +Q A + + I +L+T T+ Sbjct: 65 KNVKQ-VVIACNTLTMLGVDSLRGTHP-FGVVGMSKGAQQLLAASPNKKIGVLATQFTIA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 I + +Q ++ V+ +E G + E+++ I + + Sbjct: 123 SGLHKKAILAADAQAQVYPVACPKFVPLIE----GERFDSPELQQAIAEYTEPFKKAGVE 178 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L+CTHYP I V LD + + + A L +T + + Sbjct: 179 AVILSCTHYPFIKEQIEADLGPNVKVLDPAAATSADAIAALKEEGLLRTEGKGRLQVCCT 238 Query: 254 GK 255 Sbjct: 239 AD 240 >gi|225872661|ref|YP_002754118.1| glutamate racemase [Acidobacterium capsulatum ATCC 51196] gi|225792605|gb|ACO32695.1| glutamate racemase [Acidobacterium capsulatum ATCC 51196] Length = 276 Score = 244 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 10/256 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL+ + +P+ F+Y D PYG + + + ++ + Sbjct: 11 IGVFDSGFGGLTVLRALLRELPQAEFLYFGDTARLPYGAKSRETIARYAVSAAEFLV-RQ 69 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRR 134 VIACNTA L D+LR+ + LG V AA A++ SG + +++T AT+ Sbjct: 70 GAEYLVIACNTASALALDDLRAAL-DIPVLGVVETGANAAQAHSHSGDVLVIATAATVES 128 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RT 192 + + + +L VEE + + + + + Sbjct: 129 HAYATACAERNLRA--VEKACPLLVPLVEEGWIDHPVTREVLSIYFTELMHQSKAAALAP 186 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++L CTHYPL+ Q P + +D+++ A + ++ Q F Sbjct: 187 DTLLLGCTHYPLLREPIEQAIPAQIRVIDSAEV---TAAQVAAAVHAPQAGTPAAPRFFA 243 Query: 253 SGKPDIAMRRLMQGFG 268 + P R + G Sbjct: 244 TDSPAKFQRLGSRFLG 259 >gi|220931107|ref|YP_002508015.1| glutamate racemase [Halothermothrix orenii H 168] gi|254766117|sp|B8D151|MURI_HALOH RecName: Full=Glutamate racemase gi|219992417|gb|ACL69020.1| glutamate racemase [Halothermothrix orenii H 168] Length = 253 Score = 244 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 9/253 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GG+ VL++ L+P +IY AD PYG + + +++ + ++++ Sbjct: 3 IGIFDSGVGGITVLKEALNLLPGEDYIYYADTANVPYGTKDKNEVRQYIFKAVEFLINRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ +LR T+ +G PA+K A +++ + +L+TP T+R Sbjct: 63 -IEALVVACNTATSIAIKDLRETY-QFPIVGMEPAVKPAVERSRNKKVLVLATPLTIREE 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NL+ ++ + + L EYA G E+ I ++ + + Sbjct: 121 KFRNLVSRVKAEDIVDSLGLPGLV----EYAEGFVFDENIIIPYLKDRLSPFNLQEYGTL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALFLSG 254 VL CTH+ +F ++ P +D +D + R + LL + + + + SG Sbjct: 177 VLGCTHFLYFRDIFNKIIPDHIDIIDGNKGTVRHLKNLLLQSGFKTGSEGSGEIIFYSSG 236 Query: 255 KPDIAMRRLMQGF 267 K D RRL + Sbjct: 237 KKD--ERRLKKYL 247 >gi|149914761|ref|ZP_01903291.1| indolepyruvate ferredoxin oxidoreductase [Roseobacter sp. AzwK-3b] gi|149811554|gb|EDM71389.1| indolepyruvate ferredoxin oxidoreductase [Roseobacter sp. AzwK-3b] Length = 270 Score = 244 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 103/266 (38%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + S + D Sbjct: 2 AVGIFDSGLGGLTVLDAVEKRLPDVPFVYFGDNAHAPYGVRDADDVYDLTTRAVSRLWDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ + LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQENWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + E ++ ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ + +L CTHYPL+ + F++ V ++ +A L R Sbjct: 179 A--LKRKMPNPEAAILGCTHYPLMQNAFQEALGPDVQVYSQANLVAESLADYLTRHPAML 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + A +G P R Q Sbjct: 237 G-SGREAAFLTTGDPKRVSSRATQFL 261 >gi|293376564|ref|ZP_06622792.1| glutamate racemase [Turicibacter sanguinis PC909] gi|325839373|ref|ZP_08166812.1| glutamate racemase [Turicibacter sp. HGF1] gi|292644790|gb|EFF62872.1| glutamate racemase [Turicibacter sanguinis PC909] gi|325490493|gb|EGC92809.1| glutamate racemase [Turicibacter sp. HGF1] Length = 257 Score = 244 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 9/242 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGGL VL + +P + ++Y AD + PYG ++ + ++ K Sbjct: 3 IGFFDSGIGGLTVLSEALKRLPHHDYLYYADTLHAPYGPKPKEEVRGYIFEAIEFLVRKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133 + VIACNTA ++ ++LR + + +G PA+K A + Q + + +TP TL+ Sbjct: 63 A-DIIVIACNTATSIAVNDLREKY-QIPIIGMEPAVKPAIEWVQESGKRVLVTATPLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +LI L+ L E + + + ++ ++ + Sbjct: 121 EEKLHHLIERLDQSHVTDLLPLPDLVRFAESF----DFSPETVVPYLKKQLVDYQISDYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTH+PL F+++ ++ +D S ++ + +T + S Sbjct: 177 AIVLGCTHFPLFASSFKEVFEPGIELIDGSVGTVTHLANIIDTMK-GETSKTPTVTFYQS 235 Query: 254 GK 255 G+ Sbjct: 236 GR 237 >gi|8102060|gb|AAF72725.1|AF264024_1 glutamate racemase [Psychrobacter sp. St1] Length = 296 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 18/272 (6%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M + KK I +FDSG+GGL V + +P ++Y AD + PYGN + + Sbjct: 1 MNLGTVINNKKRNAPIGLFDSGVGGLSVYLHLAQQLPAERYVYYADTLNVPYGNRDSADI 60 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + + + ++ L VIACN+A + R +P + +G VPA+K A + +++ Sbjct: 61 EALTLTAVDWLYEQG-CKLIVIACNSASAYALETARRRYPQLPIVGLVPALKPAISASKT 119 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCH--IHLVSSMILASRVEEYACGIKIKEDEIKK 178 G + +L+T ATL T + +I + + + L VE G+ ++D + Sbjct: 120 GRVVVLATKATLNGTLLNEVIDHFAKPNNTVVTKYFDPQLVPWVE---AGMPEQDDTALR 176 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYP----LIVHVF--RQLSPWPVDWLDNSDSIARRARC 232 + D +VL CTHYP +++ +QL+ + +D+ +IA R + Sbjct: 177 -LRQQLTLFAHDGVDQLVLGCTHYPFFKTFLLNEIAQQQLA---MQVVDSGQAIAERVKQ 232 Query: 233 LLPRINTHQ--TRVFDDHALFLSGKPDIAMRR 262 LL DDH L + K + + Sbjct: 233 LLAANQLSALIDNTPDDHCLETTDKTKVVTQP 264 >gi|195953669|ref|YP_002121959.1| glutamate racemase [Hydrogenobaculum sp. Y04AAS1] gi|229486240|sp|B4UA20|MURI_HYDS0 RecName: Full=Glutamate racemase gi|195933281|gb|ACG57981.1| glutamate racemase [Hydrogenobaculum sp. Y04AAS1] Length = 259 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 11/232 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R + + +Y+ D PYG + + ++++ Sbjct: 3 IGMFDSGVGGLTVLKSVRKVYDKVDIVYLGDTARVPYGIKSKETIITYAKESANFLINQ- 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134 + +IACN+ + L+ F + +G + A ++ A +++ + I+ T AT+ Sbjct: 62 NVDVILIACNSVSANAMEALQEMF-DIPIVGVIEAGVEAALKSSKTKHVGIIGTSATINS 120 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRTD 193 + ++ + + + VEE I KK +E E + K D Sbjct: 121 NKYQERLEAFN--IKTYAKACPLFVPIVEEKLINTDIS----KKAVEFYLKEFKDLKDID 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 ++L CTHYPL+ + P ++ + +SD+I ++ T ++ Sbjct: 175 TLILGCTHYPLLEEDIKAFLP-HINLVSSSDAIISYINNIVKNEGNATTELY 225 >gi|126735639|ref|ZP_01751384.1| glutamate racemase, putative [Roseobacter sp. CCS2] gi|126714826|gb|EBA11692.1| glutamate racemase, putative [Roseobacter sp. CCS2] Length = 270 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ +Y+ D PYG + + D Sbjct: 2 AVGIFDSGLGGLTVLDAVAKRLPDVPLVYMGDSAHAPYGVRTPDDIYDLTTKSTQRLFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQ-----------SG 121 L ++ACNTA ++ + LG + +A Q + Sbjct: 62 G-CDLVILACNTASAAALRRMQEAWVPDGKRVLGVFVPLIEALTERQWGDNSPPREVDTK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + E + ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVSSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ D +L CTHYPL+ F++ V ++ +A L R Sbjct: 179 A--LKRKMPEPDAAILGCTHYPLMAKEFQKALGAHVKVFSQAELVAESLADYLERRPEMV 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 D A +G P R Q Sbjct: 237 G-PGTDSAFLTTGDPAQVSSRATQFL 261 >gi|329922868|ref|ZP_08278384.1| glutamate racemase [Paenibacillus sp. HGF5] gi|328941641|gb|EGG37926.1| glutamate racemase [Paenibacillus sp. HGF5] Length = 258 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 8/256 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GGL VL +P F+++AD + PYG +K + I+ + Sbjct: 3 IAFFDSGLGGLTVLTAAMKKLPHEDFLFLADTLHVPYGTKAKEDVKAYIHQAMG-IIMQE 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133 + V+ACNTA ++ +LR +P + +G PA+K A + I +L+TP TL+ Sbjct: 62 EVKAIVVACNTATSMAISDLRKAYP-IPVIGMEPAVKPAVEINRASGKRILVLATPLTLK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + +L+ S + + L E + + + F + Sbjct: 121 ESKYKDLVRRVDSMHIVDSLPLPELVEHCEA----LNFDPEIMNAYFTKKFEAFDLNEYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 IVL CTHYP + L P + +D S+ R +L + + D L S Sbjct: 177 TIVLGCTHYPFYKRILSDLLPDHIRIIDGSEGTVNRLIQVLSDQDLLSSSGSQDVKLLNS 236 Query: 254 GKPDIAMRRLMQGFGL 269 + +++ + + Sbjct: 237 SQSAEYTQKMEKALSI 252 >gi|254440325|ref|ZP_05053819.1| glutamate racemase [Octadecabacter antarcticus 307] gi|198255771|gb|EDY80085.1| glutamate racemase [Octadecabacter antarcticus 307] Length = 269 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 99/266 (37%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL ++ +P+ F+Y AD PYG + + D Sbjct: 2 AVGIFDSGLGGLTVLDAVQQRLPDVPFVYYADSANAPYGVRTADDIYNLTTAATQALFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGA-VPAIKQAAAYTQ----------SG 121 L ++ACNTA ++ ++ LG VP I+ + Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPKDKRVLGVFVPLIEAMTERSWGDNSPPREVGVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + E ++ ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEGQACGGVVDAIEEG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ D VL CTHYP++ F+ V +D +A L R Sbjct: 179 A--LKRKMPEPDAAVLGCTHYPMMQDAFQTALGADVKVFSQADLVADSLADYLQRRPEMA 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 SG P R Q Sbjct: 237 G--GGTSKFLTSGDPKRVSDRATQFL 260 >gi|126640457|ref|YP_001083441.1| glutamate racemase [Acinetobacter baumannii ATCC 17978] Length = 256 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 111/245 (45%), Gaps = 11/245 (4%) Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86 V ++ +P +Y AD PYG D +++ D L + ++V+ACNT Sbjct: 2 SVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAV-DWLYRQGCKIAVVACNT 60 Query: 87 AFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145 A D LR + +G VPA+K A T+S ++++L+TPAT R +++ + Sbjct: 61 ASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKFA 120 Query: 146 --SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP 203 + + ++S+ L VE + + +++ ++ + D +VL CTHYP Sbjct: 121 VPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ----PAVEQGADYLVLGCTHYP 176 Query: 204 LIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---LFLSGKPDIAM 260 + L +D+ ++AR+ +L + ++ + A ++SG A+ Sbjct: 177 FLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIRQNVARIECYVSGNNADAL 236 Query: 261 RRLMQ 265 + ++Q Sbjct: 237 QPVLQ 241 >gi|260428076|ref|ZP_05782055.1| glutamate racemase [Citreicella sp. SE45] gi|260422568|gb|EEX15819.1| glutamate racemase [Citreicella sp. SE45] Length = 270 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 106/274 (38%), Gaps = 23/274 (8%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL + +PE F+Y AD PYG + + + Sbjct: 2 AVGVFDSGLGGLTVLDAVSKRLPEVPFVYFADSAHAPYGVRDADDIYNLTTAAVDRLWHA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ T+ LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQETWIPRDKRVLGVFVPLIEAMTERQWGDNSPPREVGVQ 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+R + + + L +EE + + E ++ ++ Sbjct: 121 HVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGLVDAIEEG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ + +L CTHYPL+ +F++ V ++ +A L R Sbjct: 179 A--LKRKMPEPEAAILGCTHYPLMEDIFQEALGPDVTVYSQANLVAESLADYLRRHPGML 236 Query: 242 TRVFDDHALFLSGKPDI----AMRRLMQGFGLKS 271 + +G P A R L + +S Sbjct: 237 GSGTES-RFLTTGDPRKVSGHATRFLRREISFES 269 >gi|93007073|ref|YP_581510.1| glutamate racemase [Psychrobacter cryohalolentis K5] gi|92394751|gb|ABE76026.1| glutamate racemase [Psychrobacter cryohalolentis K5] Length = 333 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 101/239 (42%), Gaps = 10/239 (4%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + I +FDSGIGGL V + +P +IY AD + PYGN + +K + Sbjct: 42 ADPDRSAPIGLFDSGIGGLSVYLHLAQQLPNERYIYYADTLNVPYGNRDSDDIKTFTLTA 101 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L + L VIACN+A R +P + +G VPA+K A ++SG +++L+ Sbjct: 102 V-EWLYQQGCKLIVIACNSASAYALQTARCHYPQLPIVGLVPALKPAVLASKSGHVAVLA 160 Query: 128 TPATLRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 T ATL +++I + S + L VE + E + + Sbjct: 161 TKATLNGKLLNDVIATIASPSATRVTKYFDPQLVPWVESGMP----ENSETAQNLRQQLQ 216 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQ 241 D +VL CTHYP Q + +D+ +IA R + LL N Sbjct: 217 VFAKDGVDQLVLGCTHYPFFKDFVMQAIESQRLSMQVVDSGQAIAERVKQLLIANNLSA 275 >gi|88861400|ref|ZP_01136029.1| glutamate racemase [Pseudoalteromonas tunicata D2] gi|88816575|gb|EAR26401.1| glutamate racemase [Pseudoalteromonas tunicata D2] Length = 269 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 10/249 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 LQ I++FDSGIGG VL+ ++ P + Y+ D++ PYGN L++RL+ + Sbjct: 4 LQPHIVVFDSGIGGTTVLEHIQAAYPFAQYSYLMDNLFMPYGNLTIEVLQQRLLAKLKTV 63 Query: 72 LDKYQP-VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +++ + VIACNTA T D LRS + + +G VPAIK A + +G + +L+TP Sbjct: 64 QEQFVKIDIIVIACNTASTQTLDFLRS-YTDIPIVGVVPAIKPACLQSSTGSVGLLATPG 122 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ YT +LI+++ + +HL S L S E+ + D++ +E+E K + Sbjct: 123 TIKNVYTQSLINAHSNNVKVHLYGSTRLVSLAEDKFWFGVVSIDDVAEELERL---KIEQ 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-----THQTRVF 245 D ++L CTH+P + QL + +D+ +IA R LL + Sbjct: 180 SIDHLILGCTHFPFLKSELAQLLSPSMKIIDSGAAIANRVSFLLSENGWVKDDAQNEVIK 239 Query: 246 DDHALFLSG 254 + + Sbjct: 240 KPLRYYATA 248 >gi|72381894|ref|YP_291249.1| glutamate racemase [Prochlorococcus marinus str. NATL2A] gi|123621455|sp|Q46LT2|MURI_PROMT RecName: Full=Glutamate racemase gi|72001744|gb|AAZ57546.1| glutamate racemase [Prochlorococcus marinus str. NATL2A] Length = 265 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 11/256 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGG VL+K+ L P FIY+AD PYG + +KK + S Sbjct: 3 IGLFDSGIGGFTVLKKVIKLCPNNSFIYLADTARLPYGIKTTNEIKKIAEEISSWF-RYQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + ++ACNT + D L+ + I AA+ Q + +L+TP+T++ Sbjct: 62 KIDAFLVACNTTNAIALDILKKNLD----IPVFDLIGSAASTIQESRVGVLATPSTVKTK 117 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +N I + + + +E I D+I G ++ + Sbjct: 118 AYTNAILEFKPKTFVIEQPCPAFVPMIE----MDNINSDDITDVATGYLQPLLKQKIHSL 173 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INTHQTRVFDDHALFLS 253 +L C+HYPLI R++ P V +D +++++ + + + N + + F D +++ Sbjct: 174 ILGCSHYPLIAPSLRKVLPSSVKLIDPAEALSFKLKLFIDSKTSNYSKNKNFVDLKFYVT 233 Query: 254 GKPDIAMRRLMQGFGL 269 + + Sbjct: 234 SNLKHFPNKAKHWLNV 249 >gi|92113464|ref|YP_573392.1| glutamate racemase [Chromohalobacter salexigens DSM 3043] gi|91796554|gb|ABE58693.1| glutamate racemase [Chromohalobacter salexigens DSM 3043] Length = 267 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 7/260 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + ILIFDSG+GGL V+ +R +P YV D+ PYG D L R++ Sbjct: 1 MTAPILIFDSGVGGLSVVGALRARLPGAALAYVCDNAALPYGTKPDAWLVARIVAACRAA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + V+ACNTA TL LR + ++ +G VPAIK AA +SG+ +L+T AT Sbjct: 61 VAASGACALVVACNTASTLALQALRESL-TVPVIGTVPAIKPAAQLLRSGVFGLLATSAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + R YT LI + + C + +++ L ++ E G E I + E Sbjct: 120 VSRPYTQRLIGEFATHCTVIRLAADPLVAQAERVLAGRAPDEAVIAASLAPL---WEAPD 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTH+PL+ +P V W+D+ D+IARR ++ + + + Sbjct: 177 LDTVVLGCTHFPLLRETLAAQAPRDVRWIDSGDAIARRVAQVVTPAPCNMPGAGES---W 233 Query: 252 LSGKPDIAMRRLMQGFGLKS 271 S + R + +G + Sbjct: 234 ASAPHRPGLARALAEYGFSA 253 >gi|254453816|ref|ZP_05067253.1| glutamate racemase [Octadecabacter antarcticus 238] gi|198268222|gb|EDY92492.1| glutamate racemase [Octadecabacter antarcticus 238] Length = 269 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 99/266 (37%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL ++ +P+ F+Y AD PYG + + D Sbjct: 2 AVGIFDSGLGGLTVLDAVQQRLPDVPFVYYADSANAPYGVRTADDIYNLTTAATQALFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGA-VPAIKQAAAYTQ----------SG 121 L ++ACNTA ++ ++ LG VP I+ + Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPKDKRVLGVFVPLIEAMTERSWGDNSPPREVGVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + E ++ ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEGQACGGVVDAIEEG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ D VL CTHYP++ F+ V +D +A L R Sbjct: 179 A--LKRKMPEPDAAVLGCTHYPMMQDAFQAALGADVKVFSQADLVADSLADYLQRRPEMV 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 SG P R Q Sbjct: 237 G--GGTSKFLTSGDPKRVSDRATQFL 260 >gi|124025384|ref|YP_001014500.1| putative aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. NATL1A] gi|167017318|sp|A2C175|MURI_PROM1 RecName: Full=Glutamate racemase gi|123960452|gb|ABM75235.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. NATL1A] Length = 265 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 11/254 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGG VL+K+ L P FIY+AD PYG ++ +KK + S Sbjct: 3 IGLFDSGIGGFTVLKKVIELCPNNSFIYLADTARLPYGVKTNNEIKKIAEEISSWF-RYQ 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 ++ACNT + D +++ + I AA+ Q + +L+TP+T+R Sbjct: 62 NIDAFLVACNTTNAIALDVIKNNLD----IPVFDLIGSAASNIQESRVGVLATPSTVRTK 117 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +N I + + + +E I D+I G ++ + Sbjct: 118 AYTNAILEFKPKTFVIEQPCPAFVPMIE----MDNINSDDITDVATGYLQPLLKQKIHSL 173 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INTHQTRVFDDHALFLS 253 +L C+HYPLI R++ P V +D +++++ + + + N + + F D +++ Sbjct: 174 ILGCSHYPLITSSLRKVLPSSVKLIDPAEALSFKLKFFIDSKTRNYSKNKNFVDLKFYVT 233 Query: 254 GKPDIAMRRLMQGF 267 + Sbjct: 234 SNLKNFSNKAKHWL 247 >gi|261368271|ref|ZP_05981154.1| glutamate racemase [Subdoligranulum variabile DSM 15176] gi|282569788|gb|EFB75323.1| glutamate racemase [Subdoligranulum variabile DSM 15176] Length = 271 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 99/257 (38%), Gaps = 4/257 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GGL ++++R ++P +Y D PYG+ + + +L Sbjct: 3 KRPIGVFDSGLGGLTAVRQLRRVLPGEDIVYFGDTGRVPYGSRARDTIVQYARQDIRFLL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + + AC T + E + P A + A A T++ I I+ T AT+ Sbjct: 63 SQ-DVKFIIAACGTVSSTFPPEEAARLPVPYTGVVGAASRAAVAATRNRKIGIIGTAATI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + +I + I + + VE ++ + I Sbjct: 122 RSGSYAAVIRDMMPDVQITAKACPLFVPLVENGY--VQDGNPVTQLVISDYLESVRAAGI 179 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-LF 251 D ++L CTHYPL+ + V +D+ A+ A L ++ R A + Sbjct: 180 DTLILGCTHYPLLKKMIGDYVGESVTLIDSGKVTAQAAAAALADLDLLNGRSEGGTARYY 239 Query: 252 LSGKPDIAMRRLMQGFG 268 +S PD + M G Sbjct: 240 VSDTPDNFAEQEMLFLG 256 >gi|163746582|ref|ZP_02153940.1| glutamate racemase, putative [Oceanibulbus indolifex HEL-45] gi|161380467|gb|EDQ04878.1| glutamate racemase, putative [Oceanibulbus indolifex HEL-45] Length = 269 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 101/266 (37%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL V K++ +PE F+Y+AD PYG + + D Sbjct: 2 AVGIFDSGLGGLTVWNKVQERLPEVDFVYLADSAHAPYGVRNADDIYNLTCAAVQRLFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ + LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQEGWIPREKRVLGVFVPLIEAMTERQWGDNSPPREVAVN 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + E ++ ++ Sbjct: 121 HVALFATPATVASRAFQRELSFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ D +L CTHYPL+ F+ V ++ +A L R Sbjct: 179 A--LKRKMPNPDAAILGCTHYPLMQEAFQAALGAEVKVFSQAELVAASLADYLERH--PN 234 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + A +G P R Q Sbjct: 235 MMGSGEAAFLTTGDPARVSDRATQFL 260 >gi|301597891|ref|ZP_07242899.1| glutamate racemase [Acinetobacter baumannii AB059] Length = 197 Score = 242 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 5/202 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 N I + DSG+GGL + + +R +P IY AD PYG+ E + R L Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S+++ + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T Sbjct: 61 SNLVTQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ +LI +Y + LV + LA ++E E+K +E Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----YTAEVKDYLENILAPLV 175 Query: 189 GKRTDVIVLACTHYPLIVHVFR 210 ++ D I+L CTHYP + + Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQ 197 >gi|293401254|ref|ZP_06645398.1| glutamate racemase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305380|gb|EFE46625.1| glutamate racemase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 239 Score = 242 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 4/239 (1%) Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88 L+++R MP+ ++Y D PYG E + +R + + ++ VIACNTA Sbjct: 2 LKELRRWMPKERYLYFGDSAFAPYGEKERDIITQRCLHICDKLV-HIGVKAIVIACNTAT 60 Query: 89 TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148 + +ELR +P + +G PA+K A + + +++T TL+ +L+ Y Q Sbjct: 61 SACVEELRKRYPQLPIVGMEPALKPAVEGKEHQQVIVMATHFTLKEKKFEHLMSRYRKQH 120 Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208 I+ + + L VE ++K ++ + D IVL CTH+ Sbjct: 121 CIYKLPTPKLVEIVEH---DQLENTTLVEKTLQDYLAPYDLSHIDSIVLGCTHFVFFKEQ 177 Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 R + V +D + +R + LL NT Q L+ D A L + Sbjct: 178 IRHIVKDKVTLVDGNAGTSRHVKELLSEKNTLQKESGHAKVTILNSSDDPAYITLSEKL 236 >gi|301596669|ref|ZP_07241677.1| glutamate racemase [Acinetobacter baumannii AB059] Length = 256 Score = 242 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 110/245 (44%), Gaps = 11/245 (4%) Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86 V ++ +P +Y AD PYG D +++ D L + ++V+ACNT Sbjct: 2 SVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAV-DWLYRQGCKIAVVACNT 60 Query: 87 AFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145 A D LR + +G VPA+K A T+S ++++L+TPAT R +++ + Sbjct: 61 ASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKFA 120 Query: 146 --SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP 203 + + ++S+ L VE + + +++ ++ + D +VL CTHYP Sbjct: 121 VPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ----PAVEQGADYLVLGCTHYP 176 Query: 204 LIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---LFLSGKPDIAM 260 + L +D+ ++AR+ +L + ++ + A ++SG + Sbjct: 177 FLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIRQNVARIECYVSGNNADVL 236 Query: 261 RRLMQ 265 + ++Q Sbjct: 237 QPVLQ 241 >gi|84684746|ref|ZP_01012646.1| Glutamate racemase [Maritimibacter alkaliphilus HTCC2654] gi|84667081|gb|EAQ13551.1| Glutamate racemase [Rhodobacterales bacterium HTCC2654] Length = 270 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 109/273 (39%), Gaps = 23/273 (8%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +PE F+Y D+ PYG + + S + D+ Sbjct: 2 AVGIFDSGLGGLTVLDAVTKRLPEVPFVYFGDNAHTPYGVRDADDIYNLTTKAVSRLWDE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ P LG + +A + G Sbjct: 62 G-CDLVILACNTASAAALRRMQESWIPPDKRVLGVFVPLIEALTERKWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + + ++ ++ Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILADALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ + +L CTHYP++ VF++ V + +A L R Sbjct: 179 A--LKRKMPNPEAAILGCTHYPIMEDVFQEALGPEVTVYSQASLVAASLADYLERHPKM- 235 Query: 242 TRVFDDHALFLSGKPDI----AMRRLMQGFGLK 270 + +GKP+ A R L + + Sbjct: 236 IGSGTESKFLTTGKPEKVSAGATRFLRRKIAFE 268 >gi|326570331|gb|EGE20375.1| glutamate racemase [Moraxella catarrhalis BC1] Length = 285 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127 Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 ATL+ + +IH +H +L VE D + K+ + + Sbjct: 128 QATLQGQLLAQVIHKVATSKGITVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243 + D++VL CTHYP + + LD+ +IA+R + LL Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243 Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265 + + + S D RRL Q Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270 >gi|58336762|ref|YP_193347.1| gluracemase [Lactobacillus acidophilus NCFM] gi|227903323|ref|ZP_04021128.1| glutamate racemase [Lactobacillus acidophilus ATCC 4796] gi|75433023|sp|Q5FLV8|MURI_LACAC RecName: Full=Glutamate racemase gi|58254079|gb|AAV42316.1| gluracemase [Lactobacillus acidophilus NCFM] gi|227868952|gb|EEJ76373.1| glutamate racemase [Lactobacillus acidophilus ATCC 4796] Length = 267 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 62/266 (23%), Positives = 104/266 (39%), Gaps = 16/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG GGL V +K+ +P I++ D+ PYG+ + Sbjct: 1 MDNRP--------IGLLDSGFGGLSVAKKVIEKLPNESTIFIGDNAHIPYGDRTREDIIN 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+K L VIACNTA + ++ AA T++ Sbjct: 53 LTRRSVKFLLEK-NVKLIVIACNTATAVAMPTMQKEVEQQIIGVIQSGALAAARTTKNKN 111 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +++++T T+ I + + +++ LA VE K ++ Sbjct: 112 VAVVATNVTVASHAYQKEIKFRDPEIKVTELAAPKLAPLVEAQK-----DYATNLKVVKE 166 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP-VDWLDNSDSIARRARCLLPRINTHQ 241 GK D +VL CTHYPLI F + V LD +D +A+ ++ R Sbjct: 167 SLAPLMGKEFDTLVLGCTHYPLIQKEFEEAINNKEVTILDPADQVAQYTFNVMRRDGLFS 226 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 H + +G + +L + F Sbjct: 227 DSEKAVHEYYTTGNSETF-DKLARTF 251 >gi|226324711|ref|ZP_03800229.1| hypothetical protein COPCOM_02497 [Coprococcus comes ATCC 27758] gi|225207159|gb|EEG89513.1| hypothetical protein COPCOM_02497 [Coprococcus comes ATCC 27758] Length = 260 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 10/243 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I I+DSGIGGL VL + MPE FIY AD PYG +K + + + ++ K Sbjct: 3 IGIYDSGIGGLSVLHRALKKMPEAEFIYYADTKHVPYGEKTREQIKGYVEEVLNFLIAK- 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133 + VIACNTA ++ E R F ++ +G PA+K+A Q I + +TP T+ Sbjct: 62 EVDAIVIACNTATSVATKEFRGEF-AVPIVGMEPAVKRALKLYQDMQKRILVTATPVTIA 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +L+ ++ + L L E + ++ E+ K ++ + Sbjct: 121 GEKLHSLLEKVDTEHEVDLAPLPKLVRFAEAG----RFQDPEVDKYLKNSLQSYTLNQYA 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTH+ FR++ P + ++D ++ R+ R +LP T + S Sbjct: 177 AVVLGCTHFNYFKQSFRKIFPGEIHFVDGNEGTLRQLRRVLPEQTT--PGEPSKVTYYFS 234 Query: 254 GKP 256 G+P Sbjct: 235 GEP 237 >gi|326573641|gb|EGE23600.1| glutamate racemase [Moraxella catarrhalis CO72] Length = 285 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 113/267 (42%), Gaps = 16/267 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127 Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 ATL+ + +IH +H +L VE D + K+ + + Sbjct: 128 QATLQGQLLAQVIHKVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243 + D++VL CTHYP + + LD+ +IA+R R LL Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVRSLLDCFGISADG 243 Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265 + + + S D RRL Q Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270 >gi|89067791|ref|ZP_01155245.1| Glutamate racemase [Oceanicola granulosus HTCC2516] gi|89046761|gb|EAR52816.1| Glutamate racemase [Oceanicola granulosus HTCC2516] Length = 270 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 19/264 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL+ ++ +PE F+Y+AD PYG + + + + + Sbjct: 2 AVGIFDSGLGGLTVLEAVQKRLPEVPFVYMADSAHAPYGVRDADDIYDLTTASVARLFEA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L+++ACNTA ++ ++ P+ LG + +A Q G Sbjct: 62 G-CDLAILACNTASAAALRRMQESWVPPNKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+R + + + + +EE + + E ++ ++ Sbjct: 121 HVALFATPATVRARAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ D VL CTHYPL+ VF+ V+ ++ +A L R Sbjct: 179 ALL--RKMPEPDAAVLGCTHYPLMAEVFQDALGAGVNVFSQANLVAESLADYLERRPEMI 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQ 265 A +G P R Q Sbjct: 237 GEGTQG-AFLTTGDPKRVSSRATQ 259 >gi|326560827|gb|EGE11193.1| glutamate racemase [Moraxella catarrhalis 46P47B1] gi|326561925|gb|EGE12260.1| glutamate racemase [Moraxella catarrhalis 7169] gi|326567030|gb|EGE17153.1| glutamate racemase [Moraxella catarrhalis 12P80B1] Length = 285 Score = 241 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127 Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 ATL+ + +IH +H +L VE D + K+ + + Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243 + D++VL CTHYP + + LD+ +IA+R + LL Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243 Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265 + + + S D RRL Q Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270 >gi|209966583|ref|YP_002299498.1| glutamate racemase [Rhodospirillum centenum SW] gi|209960049|gb|ACJ00686.1| glutamate racemase [Rhodospirillum centenum SW] Length = 280 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 102/277 (36%), Gaps = 26/277 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL+ + +P F+Y+ D PYGN + + + + Sbjct: 2 IGVFDSGHGGLTVLRALVDALPGRSFVYLGDHAHAPYGNRTPEEIYGLTVAAVERLFAQG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGA----------------VPAIKQA 114 L V+ACNTA L L+ T+ P LG +PA + A Sbjct: 62 -CRLVVLACNTASALALRRLQQTWLPCHHPDRRVLGVLVPMVEAITGVPWMADIPAGRHA 120 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 ++I +T T++ I + + + LA +EE A +I+ Sbjct: 121 GEP---RSVAIFATRRTVQSQAYPREIGKRAPEVEVVQQACPDLARLIEEDAPEAEIRR- 176 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +++ + E ++L CTHYPL+ F P VD LD AR L Sbjct: 177 AVRRYTASLMDKLEHGTPSAVMLGCTHYPLVAGEFAAALPAGVDVLDQPALCARSLVHYL 236 Query: 235 PRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 R +G R + FG + Sbjct: 237 ARHPEFDDDGGAPVTFLTTGDAAKVTRLATRFFGRPA 273 >gi|326569565|gb|EGE19619.1| glutamate racemase [Moraxella catarrhalis BC8] Length = 285 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127 Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 ATL+ + +IH +H +L VE D + K+ + + Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243 + D++VL CTHYP + + LD+ +IA+R + LL Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243 Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265 + + + S D RRL Q Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270 >gi|255263591|ref|ZP_05342933.1| glutamate racemase [Thalassiobium sp. R2A62] gi|255105926|gb|EET48600.1| glutamate racemase [Thalassiobium sp. R2A62] Length = 269 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 101/266 (37%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL + +P+ F+Y AD PYG + + + + D Sbjct: 2 AVGVFDSGLGGLTVLSAVAARLPDVPFVYYADSAHAPYGVRDAEDIFQLTEKAVRHLWD- 60 Query: 75 YQPVLSVIACNTAFTLIKDELRST-FPS-MAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ P LG + +A G Sbjct: 61 NGCDLVILACNTASAAALRRMQEAGVPDGKRVLGVFVPLIEALTERDWGDNSPPREVDVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + E ++ ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAVGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ D +L CTHYPL+ +F+ V L +D +A L R Sbjct: 179 A--LKRKMPTPDAAILGCTHYPLMQDIFQAALGPDVRVLSQADLVADSLADYLERRPAMA 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 +G PD R Q Sbjct: 237 GGGEP--RFLTTGDPDQVSVRATQFL 260 >gi|326563047|gb|EGE13321.1| glutamate racemase [Moraxella catarrhalis 103P14B1] gi|326577286|gb|EGE27174.1| glutamate racemase [Moraxella catarrhalis 101P30B1] Length = 285 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 113/267 (42%), Gaps = 16/267 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127 Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 ATL+ + +IH +H +L VE D + K+ + + Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243 + D++VL CTHYP + + LD+ +IA+R R LL Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVRSLLDCFGISADG 243 Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265 + + + S D RRL Q Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270 >gi|326578047|gb|EGE27911.1| glutamate racemase [Moraxella catarrhalis O35E] Length = 285 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127 Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 ATL+ + +IH +H +L VE D + K+ + + Sbjct: 128 QATLQGQLLAQVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243 + D++VL CTHYP + + LD+ +IA+R + LL Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243 Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265 + + + S D RRL Q Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270 >gi|326572368|gb|EGE22361.1| glutamate racemase [Moraxella catarrhalis BC7] Length = 285 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLAELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127 Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 ATL+ + +IH +H +L VE D + K+ + + Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243 + D++VL CTHYP + + LD+ +IA+R + LL Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243 Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265 + + + S D RRL Q Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270 >gi|83942612|ref|ZP_00955073.1| glutamate racemase [Sulfitobacter sp. EE-36] gi|83953853|ref|ZP_00962574.1| glutamate racemase [Sulfitobacter sp. NAS-14.1] gi|83841798|gb|EAP80967.1| glutamate racemase [Sulfitobacter sp. NAS-14.1] gi|83846705|gb|EAP84581.1| glutamate racemase [Sulfitobacter sp. EE-36] Length = 269 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 99/266 (37%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL V ++ +P+ F+Y+AD PYG + + D Sbjct: 2 AVGIFDSGLGGLTVWDAVQAQLPDVDFVYLADSAHAPYGVRNADDIYNLTTAATQRLFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ + LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQEGWIPSDKRVLGVFVPLIEAMTERQWGDNSPPREVDLK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +E+ + E ++ ++ Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DFILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ + +L CTHYPL+ F+ V ++ +A L R Sbjct: 179 A--LKRKMPAPEAAILGCTHYPLMQETFQDALGPDVKVFSQANLVAHSLSDYLKRH--PN 234 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + A +G P R Q Sbjct: 235 MLGTGEAAFLTTGDPKKVSSRATQFL 260 >gi|169824250|ref|YP_001691861.1| glutamate racemase [Finegoldia magna ATCC 29328] gi|167831055|dbj|BAG07971.1| glutamate racemase [Finegoldia magna ATCC 29328] Length = 261 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 14/253 (5%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++K N I DSG+GGL V +K++ LMP +IY AD PYG+ + K + Sbjct: 3 SKQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGSKTREQMIKISENI 62 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126 ++ Q L V+ACNT ++ +RS + +G V +K A T + + ++ Sbjct: 63 VRFF-NEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQTTSNKKVGVI 120 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT+ L+ + + + + VEE +++I K++E Sbjct: 121 ATKATVDNGLYKKLLEQ--NDIEVCQSACLDFVGFVEEDCK----DKEKILKKVEEYLKP 174 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D I+L CTHYP+++ ++ + + ++D +DS++ + + Sbjct: 175 IVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSEDIYEI-----CGNYQNKC 229 Query: 247 DHALFLSGKPDIA 259 D +++ P Sbjct: 230 DIKYYVTKNPSDF 242 >gi|71892359|ref|YP_278093.1| glutamate racemase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796465|gb|AAZ41216.1| glutamate racemase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 277 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 6/252 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 Q +ILI DSG+GGL + +R L+P ++Y D+ FPYG + + R+ + + Sbjct: 10 QPTILILDSGVGGLSIYIAIRKLLPHVRYLYFFDNQAFPYGEHSEFFIINRVTSIIEAVQ 69 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q L +I CNTA + L++ F +G +PAIK A+ T++G+I +L+T T+ Sbjct: 70 EQHQLDLVIIGCNTASVVSLKILQNHFLC-PIVGVIPAIKLASKLTKNGVIGVLATHRTV 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 YT +LI + ++ + L+ + L + E G KI ++ + K+ Sbjct: 129 NHDYTLSLIKRFANKYKVMLLGTSELVNLAESKIHGKKIPISILRDILTPWLNMKQP--P 186 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF---DDHA 249 D IVL CTH+ L+ +D+ S+A+ + LL + T F + Sbjct: 187 DTIVLGCTHFSLLKTELIAALSSNSYLIDSRHSVAKYSFRLLRKNTNSPTNDFCSYRPNK 246 Query: 250 LFLSGKPDIAMR 261 ++ S + A++ Sbjct: 247 IYCSMNTEKAIK 258 >gi|315648405|ref|ZP_07901504.1| glutamate racemase [Paenibacillus vortex V453] gi|315276099|gb|EFU39445.1| glutamate racemase [Paenibacillus vortex V453] Length = 267 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 103/242 (42%), Gaps = 8/242 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSG+GGL VL +P+ F++ AD + PYG +K + + + Sbjct: 3 IAFFDSGLGGLTVLSAAMRELPQEDFLFFADTLHVPYGTKAKEDVKSYIHDAI-KTIMQE 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133 + VIACNTA ++ ELR T+P + +G PA+K A +S I + +TP TLR Sbjct: 62 EVKAIVIACNTATSMAISELRRTYP-IPIIGMEPAVKPAVEINRSSGKRILVFATPLTLR 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + +L+ S + + L E KI ++++G + Sbjct: 121 ESKYRDLVRRVDSMHIVDSLPLPELVEYCEALNFDQKIMNAYFTEKLDG----FDLNEYG 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTHYP + L P + +D S R +L + + D L S Sbjct: 177 TVVLGCTHYPFYKKILSDLLPEHIQIIDGSTGTVNRLIQVLRANDLLSSSGTQDVRLLNS 236 Query: 254 GK 255 + Sbjct: 237 SQ 238 >gi|254463861|ref|ZP_05077272.1| glutamate racemase [Rhodobacterales bacterium Y4I] gi|206684769|gb|EDZ45251.1| glutamate racemase [Rhodobacterales bacterium Y4I] Length = 269 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 100/266 (37%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ DK Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVEFLYYGDNAHAPYGVRDAENIYQLTKAAMEDMWDK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRS-TFP-SMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ P LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQEGGLPQGKRVLGVFVPLIEALTERQWGDNSPPREVEVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +E+ + + E ++ ++ Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ + +L CTHYPL+ F+ V +A L R Sbjct: 179 A--LKRKMPHPEAAILGCTHYPLMEQTFQAALGPEVKVFSQGSLVADSLADYLKRHPGML 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G P R Q Sbjct: 237 GNGAGG--FYTTGNPGRVSDRATQFL 260 >gi|310780269|ref|YP_003968601.1| glutamate racemase [Ilyobacter polytropus DSM 2926] gi|309749592|gb|ADO84253.1| glutamate racemase [Ilyobacter polytropus DSM 2926] Length = 261 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 10/255 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V++++ ++PE IY D+ F Y N +++ M + ++ Sbjct: 4 IGVFDSGVGGITVVKEINKILPEDTIIYYGDNKNFHYENLSVDQIREHCMKIVEFLVL-N 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPATLRR 134 V+AC+ A D L+S F + +G + K T + I I +TPAT+ Sbjct: 63 GVDAVVVACSVATAAALDTLKSRFAHIPIVGVIDTGAKVGVEMTSNNSIGIFATPATVAM 122 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + + + L +E+ ++ +K+ + ++TD Sbjct: 123 DAYPKALRNINRKISVFQKGCPKLCYMIEDGWEDTLENDEVVKEYL-----SYIPEQTDT 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALFLS 253 ++L CTHYPLI HV + +D++ A + L + + D ++S Sbjct: 178 LLLGCTHYPLIRHVIARYFKG--TIVDSAKETADTVKKELFLKAGKSKKNKNGDPEYYIS 235 Query: 254 GKPDIAMRRLMQGFG 268 G G Sbjct: 236 GDIKKFKEVAADFLG 250 >gi|303234940|ref|ZP_07321565.1| glutamate racemase [Finegoldia magna BVS033A4] gi|302494058|gb|EFL53839.1| glutamate racemase [Finegoldia magna BVS033A4] Length = 261 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 14/253 (5%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++K N I DSG+GGL V +K++ LMP +IY AD PYG+ + K + Sbjct: 3 SKQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGSKTREQMIKISENI 62 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126 ++ Q L V+ACNT ++ +RS + +G V +K A T + + ++ Sbjct: 63 VRFF-NEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQATYNKKVGVI 120 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT+ L+ + + + + VEE +++I K++E Sbjct: 121 ATKATVDNGLYKKLLEQ--NDIEVCQSACLDFVGFVEEDCK----DKEKILKKVEEYLKP 174 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D I+L CTHYP+++ ++ + + ++D +DS++ + + Sbjct: 175 IVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSEDIYEI-----CGNYQNKC 229 Query: 247 DHALFLSGKPDIA 259 D +++ P Sbjct: 230 DIKYYVTKNPSDF 242 >gi|188582653|ref|YP_001926098.1| glutamate racemase [Methylobacterium populi BJ001] gi|179346151|gb|ACB81563.1| glutamate racemase [Methylobacterium populi BJ001] Length = 286 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 103/246 (41%), Positives = 150/246 (60%), Gaps = 2/246 (0%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 + Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + + L R++ + Sbjct: 13 QNAQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGAFTEERLVSRVIAVME 72 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T+S LIS+L+TP Sbjct: 73 RLLARHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRSRLISLLATP 131 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188 T+ R YT +L+ ++ + C + LV S LA E G + + + EI CF+E+ + Sbjct: 132 GTVARAYTHDLVRNFAAHCAVTLVGSKNLAGYAEAEMAGEPVSDAALLAEIAPCFVEQAD 191 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 G+RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + Sbjct: 192 GRRTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAQAPEAPPAR 251 Query: 249 ALFLSG 254 A+F G Sbjct: 252 AVFTGG 257 >gi|78066994|ref|YP_369763.1| glutamate racemase [Burkholderia sp. 383] gi|77967739|gb|ABB09119.1| glutamate racemase [Burkholderia sp. 383] Length = 286 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 107/261 (40%), Gaps = 10/261 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL VL+ +R +P+ FIYVAD PYG ++ + +R + + + L Sbjct: 15 APIGIFDSGLGGLSVLRAVRAQLPDESFIYVADSHHAPYGPRDEAFITERTLAI-GEWLA 73 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + VIACNTA R SM +G P IK AAA + SG+ +L+T +TL Sbjct: 74 REGAKALVIACNTATARAIAATREHL-SMPLVGVEPGIKPAAAVSASGVAGVLATQSTLN 132 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L+ Y + L +E ++ ++ D Sbjct: 133 SPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALLDSYLQPMLDDGAD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHAL 250 +VL CTHYP R L + +D SD+IAR+ +L + TR Sbjct: 189 TLVLGCTHYPFFTETIRDLVGDRLTLVDTSDAIARQLVRVLDERHLRAPAGTRAAPP-RF 247 Query: 251 FLSGKPDIAMRRLMQGFGLKS 271 + GL + Sbjct: 248 CSTSDGRQLQALASTLLGLAA 268 >gi|296112421|ref|YP_003626359.1| glutamate racemase MurI [Moraxella catarrhalis RH4] gi|295920115|gb|ADG60466.1| glutamate racemase MurI [Moraxella catarrhalis RH4] Length = 285 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 + I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D L + L +IACN+A LR + +G VPA+K A +Q+ I++L+T Sbjct: 69 VDWLCRQGCKLIIIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127 Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 ATL+ + +IH +H +L VE D + K+ + + Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243 + D++VL CTHYP + + LD+ +IA+R + LL Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243 Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265 + + + S D RRL Q Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270 >gi|30248466|ref|NP_840536.1| aspartate and glutamate racemase:glutamate racemase [Nitrosomonas europaea ATCC 19718] gi|30138352|emb|CAD84360.1| Aspartate and glutamate racemases:Glutamate racemase [Nitrosomonas europaea ATCC 19718] Length = 271 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 8/255 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL V + R L+P F+YVAD PYG+ E + +R+ + +++ Sbjct: 6 VGIFDSGVGGLAVYRAARKLLPHQAFVYVADSGFAPYGSRESAYIIRRVTEIADALVNNG 65 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNTA LR+ + S+ +G PAIK AAA +++G I +L+T T Sbjct: 66 AKAL-VVACNTATVTTVTALRAKY-SLPIIGIEPAIKPAAAISRNGRIVVLTTRRTAESE 123 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L Y + I L LA +VE I +E+K+ + DV+ Sbjct: 124 AVAQLCVRYGTHVQIMLQPCPGLADQVEAG----NIDGEEVKEMLRQYLAPAVSLANDVV 179 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFLS- 253 VL CTH+ + + L+ V ++ S+++AR+ L + A + + Sbjct: 180 VLGCTHFTFLADQIQNLAGPQVTIIEPSEAVARQLAHRLSSSKMISVNQAQAAEAFYTTA 239 Query: 254 GKPDIAMRRLMQGFG 268 P + + G Sbjct: 240 ASPSAVGDIMSKLLG 254 >gi|310816545|ref|YP_003964509.1| Glutamate racemase [Ketogulonicigenium vulgare Y25] gi|308755280|gb|ADO43209.1| Glutamate racemase [Ketogulonicigenium vulgare Y25] Length = 270 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 99/266 (37%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL + +P+ +Y D+ PYG + + + D Sbjct: 2 AVGVFDSGLGGLTVLDAVAKRLPDLPLVYFGDNAHAPYGVRTSDDIYNLTVSATQKLFD- 60 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ + LG + +A Q G Sbjct: 61 NGCDLVILACNTASAAALKRMQENWVPEGKRVLGVFVPLIEALTERQWGDNTAPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + E ++ +E Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DLILAEALVRSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ R D +L CTHYPL+ VF V ++ +A L R Sbjct: 179 A--LKRKMPRPDAAILGCTHYPLMEKVFADALGDGVQVFSQANLVAESLADYLQRHPEMV 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G P +Q Sbjct: 237 GPGMES-KFLTTGDPARVSSHAIQFL 261 >gi|84515579|ref|ZP_01002941.1| Glutamate racemase [Loktanella vestfoldensis SKA53] gi|84510862|gb|EAQ07317.1| Glutamate racemase [Loktanella vestfoldensis SKA53] Length = 270 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 98/266 (36%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ +Y+ D PYG + + D Sbjct: 2 AVGIFDSGLGGLTVLDAVAKRLPDVPLVYLGDSAHAPYGVRTPDDIYNLTTAATQRLFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPQGKRVLGVFVPLIEALTERQWGDNSPPREVAIK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +E+ + + E ++ ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + ++ D VL CTHYPL+ VF+ ++ +A L R Sbjct: 179 A--LRRKMPNPDAAVLGCTHYPLMEKVFQDALGPQAKVFSQANLVAESLADYLSRRPEMV 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 D A +G P R Q Sbjct: 237 G-TGRDSAFLTTGDPARVSARATQFL 261 >gi|302338969|ref|YP_003804175.1| glutamate racemase [Spirochaeta smaragdinae DSM 11293] gi|301636154|gb|ADK81581.1| glutamate racemase [Spirochaeta smaragdinae DSM 11293] Length = 261 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 7/244 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K I FDSGIGGL LQ +R +P + + Y+AD FPYG L ++ Sbjct: 2 KNTGPIAFFDSGIGGLPYLQWVRKKLPNFSYRYLADRANFPYGEKSIEELGGLIIGSMER 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +++ P + V+ACNTA +LR TF S+ F+G VPAIK AAA + + I +L+T Sbjct: 62 YIERVDPSIVVVACNTASVTALQKLRDTF-SVPFVGVVPAIKPAAALSCTHTIGLLATKR 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ YT NL+ + + + + + VE + + EI++ + K Sbjct: 121 TVEDPYTDNLVRLFADGFQVERFAGVDIVDFVENHLLDAEPH--EIREVLAPAVAFFSEK 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTH+ + + V +D+ + + R ++ + Sbjct: 179 EVDTLVLGCTHFLHVRDEIAEAFGGRVKIVDSIEGVGRHVIQMVSEYHG----GGGGGEF 234 Query: 251 FLSG 254 F+SG Sbjct: 235 FVSG 238 >gi|320530742|ref|ZP_08031786.1| glutamate racemase [Selenomonas artemidis F0399] gi|320137029|gb|EFW28967.1| glutamate racemase [Selenomonas artemidis F0399] Length = 262 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 5/250 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL R +P+ F++ AD PYG ++ + F ++++ Sbjct: 3 IALFDSGLGGLTVLGHARRALPDEEFLFFADRDHVPYGTKTVDEVRGFVRDAFRFLVEEE 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA ++ DE+R + + +G PA+K+A ++ + + TP T+R Sbjct: 63 RAEAVVIACNTATSVSADEMRRRY-DIPIIGMEPAVKKALDADRTRRVLVTGTPITVRGE 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI +Y + + L+ L E + +++ + + + I Sbjct: 122 KLHRLIDTYDANHLVDLLPLPRLVEFAENQ----EFVSPHVEEYLRTALAPFDFAQYSAI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ R L P + + D +D + F SG+ Sbjct: 178 VLGCTHFNFFKDTMRSLMPETMTFADGNDGTVEELARRAGLTTQPEGERTAHCTFFRSGR 237 Query: 256 PDIAMRRLMQ 265 + + L + Sbjct: 238 RVVGAQELAR 247 >gi|163736577|ref|ZP_02143996.1| Glutamate racemase [Phaeobacter gallaeciensis BS107] gi|161390447|gb|EDQ14797.1| Glutamate racemase [Phaeobacter gallaeciensis BS107] Length = 269 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 101/266 (37%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL ++ +P+ F+Y D+ PYG + + + D+ K Sbjct: 2 AVGIFDSGLGGLTVLNAVQERLPDVDFLYYGDNAHAPYGVRDAEDIYQLTKAAVEDMWSK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121 L V+ACNTA ++ P LG + +A Q G Sbjct: 62 G-CNLVVLACNTASAAALRRMQENGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +E+ + + E ++ ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ +L CTHYPL+ +F+ V +A L R Q Sbjct: 179 A--LKRKMPEPQAAILGCTHYPLMEEIFQAALGADVQVFSQGRLVADSLADYLERH--PQ 234 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G P R Q Sbjct: 235 MMGQGQGGFYTTGVPARVSDRATQFL 260 >gi|163732003|ref|ZP_02139449.1| glutamate racemase, putative [Roseobacter litoralis Och 149] gi|161394301|gb|EDQ18624.1| glutamate racemase, putative [Roseobacter litoralis Och 149] Length = 269 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 102/266 (38%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 S+ IFDSG+GGL VL ++ +P+ F Y+AD PYG + + + D Sbjct: 2 SVGIFDSGLGGLTVLDAVQTRLPDVSFAYLADSAHAPYGVRTADDIYDLTCRSVARLFDT 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 G-CNLVILACNTASAAALRRMQESWVPDDKRVLGVFVPLIEAMTERQWGDNSPPREVGVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +E+ + + E ++ ++ Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMMLAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ D +L CTHYPL+ +F++ V ++ +A L R Sbjct: 179 A--LQRKMPTPDAAILGCTHYPLMQDIFQKALGENVRVFSQANLVADSLADYLERHPKMH 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 +G P R Q Sbjct: 237 GTGSP--VFLTTGDPGRVSDRATQFL 260 >gi|302380932|ref|ZP_07269394.1| glutamate racemase [Finegoldia magna ACS-171-V-Col3] gi|302311310|gb|EFK93329.1| glutamate racemase [Finegoldia magna ACS-171-V-Col3] Length = 261 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 14/253 (5%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++K N I DSG+GGL V +K++ LMP +IY AD PYG+ + K + Sbjct: 3 SKQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGSKTREQMIKISENI 62 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126 ++ Q L V+ACNT ++ +RS + +G V +K A T + + ++ Sbjct: 63 VRFF-NEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQTTSNKKVGVI 120 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 ST AT+ L+ + + + + VEE +++I K++E Sbjct: 121 STKATVDNGLYKKLLEQ--NDIGVCQSACLDFVGFVEEDCK----DKEKILKKVEEYLKP 174 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 D I+L CTHYP+++ ++ + + ++D +DS++ + + Sbjct: 175 IVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSEDVYEI-----CGNYQNKC 229 Query: 247 DHALFLSGKPDIA 259 D +++ P Sbjct: 230 DIKYYVTKNPSDF 242 >gi|238927873|ref|ZP_04659633.1| glutamate racemase [Selenomonas flueggei ATCC 43531] gi|238884206|gb|EEQ47844.1| glutamate racemase [Selenomonas flueggei ATCC 43531] Length = 262 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 100/250 (40%), Gaps = 5/250 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL R ++P FI+ AD PYG A++ + F ++++ Sbjct: 3 IALFDSGYGGLTVLSHARRVLPSEEFIFYADRDHVPYGTKSVPAVRGFVRTAFRFLIEQQ 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA ++ DE+R + + +G PA+K+A + + +TP T+ Sbjct: 63 RADAVVVACNTATSVAVDEMRRLY-DVPIIGMEPAVKKALTRDADHRVLVTATPITVHGE 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI S + L++ L E + ++ + F I Sbjct: 122 KLKRLISSCDPNGLVDLLALPQLVEFAERQ----EFVSSAVEAYLRDAFAPYRFADYSAI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ RQL P V +D ++ F SG+ Sbjct: 178 VLGCTHFNYFKDTMRQLLPQNVRLVDGNEGTVEELARRTGLRTQPIGAQTAHCTFFESGR 237 Query: 256 PDIAMRRLMQ 265 P + L Sbjct: 238 PVVRAEELAH 247 >gi|163742776|ref|ZP_02150161.1| glutamate racemase [Phaeobacter gallaeciensis 2.10] gi|161384031|gb|EDQ08415.1| glutamate racemase [Phaeobacter gallaeciensis 2.10] Length = 269 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 101/266 (37%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL ++ +P+ F+Y D+ PYG + + + D+ K Sbjct: 2 AVGIFDSGLGGLTVLNAVQERLPDVDFLYYGDNAHAPYGVRDAEDIYQLTKAAVEDMWSK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121 L V+ACNTA ++ P LG + +A Q G Sbjct: 62 G-CNLVVLACNTASAAALRRMQEDGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +E+ + + E ++ ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ +L CTHYPL+ +F+ V +A L R Q Sbjct: 179 A--LKRKMPEPQAAILGCTHYPLMEEIFQAALGADVQVFSQGRLVADSLADYLERH--PQ 234 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G P R Q Sbjct: 235 MMGQGQGGFYTTGVPARVSDRATQFL 260 >gi|149194034|ref|ZP_01871132.1| glutamate racemase [Caminibacter mediatlanticus TB-2] gi|149135987|gb|EDM24465.1| glutamate racemase [Caminibacter mediatlanticus TB-2] Length = 245 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 13/252 (5%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 IFDSG+GGL V +++ IY D PYGN + + + + + L + Sbjct: 5 GIFDSGVGGLSVAREILKSKLFDEIIYFGDTARVPYGNKNESTIIRYSLECL-EFLKNFN 63 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRT 135 V+ACN+A ++ +ELR S +G + A IK ++ I ++ T T+ + Sbjct: 64 IDFLVVACNSASSVAIEELRKEV-SFPVVGVIEAGIKAIENENKNSNILLIGTKRTISSS 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 N + S +I +++ +L VEE KI +D E F + ++ D+I Sbjct: 123 KYQNALISL-GFKNIISIATPLLVPLVEEGIVEGKIVDD----IFEMYFRNLDKEKIDII 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +L CTHYP + F++ P + + +I + LL + + + ++ S Sbjct: 178 ILGCTHYPFLEKSFKKHFP-NAKLIHSGQAIVK----LLKKEYNLKPKQISKIEIYASDN 232 Query: 256 PDIAMRRLMQGF 267 + + + Sbjct: 233 VEEVRKIAKKWL 244 >gi|114766197|ref|ZP_01445197.1| Glutamate racemase [Pelagibaca bermudensis HTCC2601] gi|114541568|gb|EAU44611.1| Glutamate racemase [Roseovarius sp. HTCC2601] Length = 270 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 98/255 (38%), Gaps = 19/255 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL + +PE F+Y AD PYG + + + + Sbjct: 2 AVGVFDSGLGGLTVLDAVSKRLPEVPFVYFADSAHAPYGVRDADDIYNLTTAAVERLWEA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQESWIPRDKRVLGVFVPLIEAMTERQWGDNSPPREVAVQ 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+R + + + L +EE + + E ++ ++ Sbjct: 121 HVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGLVDAIEEG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ +L CTHYPL+ F++ V ++ +A L R Sbjct: 179 A--LKRKMPSPQAAILGCTHYPLMQETFQEALGEDVAVYSQANLVAESLADYLQRHPGM- 235 Query: 242 TRVFDDHALFLSGKP 256 +G P Sbjct: 236 IGTGTTSRFLTTGDP 250 >gi|260433846|ref|ZP_05787817.1| glutamate racemase [Silicibacter lacuscaerulensis ITI-1157] gi|260417674|gb|EEX10933.1| glutamate racemase [Silicibacter lacuscaerulensis ITI-1157] Length = 269 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 98/266 (36%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y AD PYG + + D+ + Sbjct: 2 AVGIFDSGLGGLTVLNAAQTRLPDVDFLYYADSAHAPYGVRDAEDIYNLTRNAVQDLWSR 61 Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ P LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQEEGVPQGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + E ++ ++ Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ +L CTHYPL+ F+ V D +A L R Sbjct: 179 A--LKRKMPHPQAAILGCTHYPLMAEAFQAALGPDVQVFSQGDLVAESLADYLQRHPGML 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G P R Q Sbjct: 237 G--TGEAGFLTTGDPKKVSDRATQFL 260 >gi|297587459|ref|ZP_06946103.1| possible glutamate racemase [Finegoldia magna ATCC 53516] gi|297574148|gb|EFH92868.1| possible glutamate racemase [Finegoldia magna ATCC 53516] Length = 261 Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 14/252 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 ++K N I DSG+GGL V +K++ LMP+ +IY AD PYG+ + + Sbjct: 4 KQKPYNKIGFVDSGLGGLTVFKKVKKLMPDKEYIYFADSANVPYGSKTRDQML-MISENI 62 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILS 127 ++ Q L V+ACNT ++ D ++S + +G V +K A T + + +++ Sbjct: 63 VRFFNEQQIDLLVVACNTLTSIALDYMKS-IANFDIIGVVEYGVKSAIKTTSNKKVGVIA 121 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ L+ + + S VEE +D+I +++E Sbjct: 122 TKATVDNGLYKKLLEQ--QGVEVCQSACFDFVSFVEEDCK----DKDKILEKVEEYLKPI 175 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D I+L CTHYP+++ +Q + + ++D +DS++ + + D Sbjct: 176 VDFGADTIILGCTHYPILIEYLKQYTGENITFVDPADSLSEDVFEI-----CGNYQNKCD 230 Query: 248 HALFLSGKPDIA 259 F++ P Sbjct: 231 TKYFVTKNPSDF 242 >gi|254510376|ref|ZP_05122443.1| glutamate racemase [Rhodobacteraceae bacterium KLH11] gi|221534087|gb|EEE37075.1| glutamate racemase [Rhodobacteraceae bacterium KLH11] Length = 269 Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 99/266 (37%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y AD PYG + + + D+ Sbjct: 2 AVGIFDSGLGGLTVLNAAQKRLPDVDFLYYADSAHAPYGVRDAEDIYNLTRAAVQGLWDR 61 Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ LG + +A Q G Sbjct: 62 G-CNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVEVQ 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +E+ + + E ++ ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRGHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ +L CTHYPL+ F+Q V D +A L R Sbjct: 179 A--LKRKMPEPQAAILGCTHYPLMAETFQQALGPHVKVYSQGDLVAESLADYLQRHPNML 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 +GKP + R Q Sbjct: 237 GEGAGG--YLTTGKPGVVTDRATQFL 260 >gi|37521065|ref|NP_924442.1| glutamate racemase [Gloeobacter violaceus PCC 7421] gi|81710349|sp|Q7NKI2|MURI_GLOVI RecName: Full=Glutamate racemase gi|35212061|dbj|BAC89437.1| glutamate racemase [Gloeobacter violaceus PCC 7421] Length = 265 Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 9/251 (3%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL+++ +P IY AD PYG+ + + + + ++ Sbjct: 4 GLFDSGLGGLTVLREIARRLPAQPVIYFADTARLPYGSRTPAEICRYVREILHWF-EQQG 62 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 ++ACNT+ L + S + +G + A AA + I +++T AT++ Sbjct: 63 VQRVLMACNTSSALALPVVASEYALK--VGGLIAPAARAAARRGRRIGVIATAATVQSHA 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 + I + + + V+ VE G ++ +E++ +R D +V Sbjct: 121 YTRAIQALTPRAQVWEVACPEFVPLVE----GGRLLGEEVRSVARRYLAPLVEQRIDTLV 176 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 CTHYP + V L P V +D + + LP +TR F+SG P Sbjct: 177 YGCTHYPYLAPVIGDLLPASVRCVDPAVAAVAELAAALPPSRRLETRAA--CHFFVSGDP 234 Query: 257 DIAMRRLMQGF 267 + Sbjct: 235 VRFAQAAYPWL 245 >gi|313896052|ref|ZP_07829606.1| glutamate racemase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975477|gb|EFR40938.1| glutamate racemase [Selenomonas sp. oral taxon 137 str. F0430] Length = 262 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 5/250 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL R +P+ F++ AD PYG ++ + F ++++ Sbjct: 3 IALFDSGLGGLTVLGHARRALPDEEFLFFADRDHVPYGTKTVDEVRGFVRDAFRFLVEEE 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA ++ DE+R + + +G PA+K+A ++ + + TP T+R Sbjct: 63 RVEAIVIACNTATSVSADEMRRCY-DIPIIGMEPAVKKALDADRTRRVLVTGTPITVRGE 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI +Y + + L+ L E + +++ + + + I Sbjct: 122 KLHRLIDTYDANHLVDLLPLPRLVEFAENQ----EFVSPHVEEYLRTALAPFDLAQYSAI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ R L P + + D +D + F SG+ Sbjct: 178 VLGCTHFNFFKDTMRSLMPETMTFADGNDGTVEELARRAGLTTQPEGERTAHCTFFRSGR 237 Query: 256 PDIAMRRLMQ 265 + L + Sbjct: 238 RVAGAQELAR 247 >gi|224372568|ref|YP_002606940.1| glutamate racemase [Nautilia profundicola AmH] gi|223588690|gb|ACM92426.1| glutamate racemase [Nautilia profundicola AmH] Length = 245 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 12/253 (4%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSGIGGL V ++ IY D PYGN + + + + + L + Sbjct: 5 GVFDSGIGGLSVASELLKSKLFDEIIYFGDTARVPYGNKNESTIIRYSLEAL-EFLKNFD 63 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACN+A ++ DELR +G + A +A ++ I + T T++ Sbjct: 64 IDFLVVACNSASSVAIDELRREA-GFPVVGVIEAGVKALDAAKTSNILLTGTKRTIQSNK 122 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 N++ Q +I V++ + VEE KI + + E F + + D ++ Sbjct: 123 YQNMLLDLGYQ-NIISVATPLFVPLVEEGITEGKI----VDEVFELYFGDIDKSSIDYVI 177 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHYP + F++ P + + +I LL + + LF S P Sbjct: 178 LGCTHYPFLAKSFKKHFP-NAKLIHSGQAIV----ELLKNEYGLKEKSDTSIKLFASDNP 232 Query: 257 DIAMRRLMQGFGL 269 + + + L Sbjct: 233 EELRSKAKEWLNL 245 >gi|110680409|ref|YP_683416.1| glutamate racemase, putative [Roseobacter denitrificans OCh 114] gi|123172245|sp|Q163W3|MURI_ROSDO RecName: Full=Glutamate racemase gi|109456525|gb|ABG32730.1| glutamate racemase, putative [Roseobacter denitrificans OCh 114] Length = 269 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 S+ IFDSG+GGL VL ++ +P+ F Y+AD PYG + + + D Sbjct: 2 SVGIFDSGLGGLTVLDAVQTRLPDMPFAYLADSAHAPYGVRTADDIYDLTCQSVARLFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 G-CNLVILACNTASAAALRRMQESWVPEDKRVLGVFVPLIEAMTERQWGDNSPPREVGVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +E+ + + E ++ +E Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMMLAEALVRSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ D +L CTHYPL+ +F++ V ++ +A L R + Sbjct: 179 A--LQRKMPTPDAAILGCTHYPLMQDIFQKALGENVRVFSQANLVADSLADYLERHPGMR 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 +G P R Q Sbjct: 237 GTGSP--VFLTTGDPARVSDRATQFL 260 >gi|329907999|ref|ZP_08274775.1| Glutamate racemase [Oxalobacteraceae bacterium IMCC9480] gi|327546835|gb|EGF31763.1| Glutamate racemase [Oxalobacteraceae bacterium IMCC9480] Length = 275 Score = 237 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 13/273 (4%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + P I +FDSGIGGL VL+ +R +P+ +Y +D PYG + +++ Sbjct: 1 MTTTPM--AANAPIGVFDSGIGGLSVLRHIRANLPQEALLYFSDAQFAPYGGRPEQQIEE 58 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + + + +L +Q V+ACN+A LR +P++ +G P +K AAA + S + Sbjct: 59 RALAIGA-LLVAHQVKALVVACNSATAAAIAALRHAYPALIVVGVEPGLKPAAAVSASRI 117 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEI 180 + +L+T ATL + L + + + ++ LA R+E+ + + + Sbjct: 118 VGVLATEATLASERFARLRMTLSAATGVTFLAQPCPGLALRIEQ----DSMHLPDAMALL 173 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRARCLLPR 236 + + D +VL CTHYP + ++ V +D ++AR+ L Sbjct: 174 RSFVLPLLDQGADTLVLGCTHYPFVQEQIAAIASAHSTNSVTLIDTGAAVARQLASQLHI 233 Query: 237 INTHQTRVFDDHALFLSGKPDIAMRRLMQGFGL 269 + A S R ++ GL Sbjct: 234 QGLLRQDGAPSVAGLSSANAVDLERAFLRLLGL 266 >gi|325273239|ref|ZP_08139520.1| glutamate racemase [Pseudomonas sp. TJI-51] gi|324101626|gb|EGB99191.1| glutamate racemase [Pseudomonas sp. TJI-51] Length = 187 Score = 237 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 5/188 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + + DSG+GGL VL +++ L+P +YVAD PYG +++R + Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPNETLLYVADCGHVPYGEKSPDYIRERCRRIAGFFR 64 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ L V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL Sbjct: 65 EQGAKAL-VLACNTATVAAAADLRELYPNWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + L+ + S + L +E + +++ + G Sbjct: 124 QSAKFAALLDRFASDVLVITQPCPGLVELIETG----DLCSPTLRQMLWGYVEPLLAAGC 179 Query: 193 DVIVLACT 200 D ++L CT Sbjct: 180 DTLILGCT 187 >gi|159044309|ref|YP_001533103.1| glutamate racemase [Dinoroseobacter shibae DFL 12] gi|189030360|sp|A8LMF7|MURI_DINSH RecName: Full=Glutamate racemase gi|157912069|gb|ABV93502.1| glutamate racemase [Dinoroseobacter shibae DFL 12] Length = 273 Score = 237 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 102/266 (38%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL + +PE F+Y D++ PYG + + + S + D+ Sbjct: 2 AVGVFDSGLGGLTVLDAVSRRLPEVPFVYYGDNLHAPYGVRDAEDVYELTTGAVSRLWDE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPSDKRVLGVFVPLIEALTERQWGDNSPPREVAIK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + +E+ + + E ++ +E Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQPCGGVVDAIEDG--DMILAEALVRSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +++ + +L CTHYPL+ VF+ V + +A L R Sbjct: 179 A--LKRRMPHPEAAILGCTHYPLMQDVFQDALGADVKVYSQAQLVAESLADYLTRHPDML 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G P + Q Sbjct: 237 GLGAEP-GFLTTGDPKSVSNKATQFL 261 >gi|332558385|ref|ZP_08412707.1| glutamate racemase [Rhodobacter sphaeroides WS8N] gi|332276097|gb|EGJ21412.1| glutamate racemase [Rhodobacter sphaeroides WS8N] Length = 270 Score = 237 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 99/266 (37%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + + + Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ T+ LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + +E+ + E ++ +E Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +++ +L CTHYPL+ +F++ V ++ +A L R Sbjct: 179 A--LKRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFA 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G P + Q Sbjct: 237 G-AGTESKFLTTGDPRSVSNKATQFL 261 >gi|77463505|ref|YP_353009.1| glutamate racemase [Rhodobacter sphaeroides 2.4.1] gi|123591864|sp|Q3J276|MURI_RHOS4 RecName: Full=Glutamate racemase gi|77387923|gb|ABA79108.1| glutamate racemase [Rhodobacter sphaeroides 2.4.1] Length = 270 Score = 237 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 99/266 (37%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + + + Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ T+ LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + +E+ + E ++ +E Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +++ +L CTHYPL+ +F++ V ++ +A L R Sbjct: 179 A--LKRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFA 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G P + Q Sbjct: 237 GDGTES-KFLTTGDPRSVSNKATQFL 261 >gi|91228520|ref|ZP_01262441.1| glutamate racemase [Vibrio alginolyticus 12G01] gi|91187896|gb|EAS74207.1| glutamate racemase [Vibrio alginolyticus 12G01] Length = 204 Score = 237 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 7/206 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++ Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLVSRVNQLVSSLV 65 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R YT LI + + L+ S L EE G + DE+ K + + Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGNSVSLDELTKILLPL-----RDKV 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218 DV VL CTH+PLI Q V Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGGDVT 204 >gi|306820477|ref|ZP_07454113.1| glutamate racemase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551552|gb|EFM39507.1| glutamate racemase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 271 Score = 237 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 107/258 (41%), Gaps = 22/258 (8%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I IFDSG+G VL K+ +MP ++IY D PYG L+K Sbjct: 1 MDNRP--------IGIFDSGVGAFSVLNKLVEVMPNENYIYFGDSGHNPYGQKTAEELQK 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + D L + + VIACNTA D L+ + + +G + P K+A T++ Sbjct: 53 LCSCIV-DFLTRKEVKAIVIACNTATVAALDYLQERY-YLPIIGVINPGAKEALRLTKNN 110 Query: 122 LISILSTPATLRRTYTSNLIHS---YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 I + ST T + N I+ ++ S+ LA+ +E E IK+ Sbjct: 111 KIGVCSTVFTAKTHGYLNDINKVSNNDKSLKVYEEGSVNLANIIENGFEYNDENEAIIKE 170 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + + D ++L CTHYPL+ +F + +D A AR +L N Sbjct: 171 -----LVGRFTDNIDTLILGCTHYPLVEDLFAKYFKGN--IVDPGMQTAIEARNILKAKN 223 Query: 239 THQTRVFD-DHALFLSGK 255 + +++ Sbjct: 224 MLTDSSDNYKVQYYVTKD 241 >gi|56696751|ref|YP_167112.1| glutamate racemase [Ruegeria pomeroyi DSS-3] gi|81558534|sp|Q5LS93|MURI_SILPO RecName: Full=Glutamate racemase gi|56678488|gb|AAV95154.1| glutamate racemase [Ruegeria pomeroyi DSS-3] Length = 269 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 102/266 (38%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL+ + +PE F+Y AD PYG + + D+ ++ Sbjct: 2 AVGIFDSGLGGLTVLEAAQKRLPEVEFLYYADSAHAPYGVRTPDDIFQLTRAAVHDLWNR 61 Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ P LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQEEGVPPGKRVLGVFVPLIEALTERQWGDNSPPREVEVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + E ++ ++ Sbjct: 121 NVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DLILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ +L CTHYPL+ +F+ V + +A L R Sbjct: 179 A--LKRKMPYPQAAILGCTHYPLMEPIFQDALGPDVRVFSQGNLVADSLADYLERH--PN 234 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 R +GKP R Q Sbjct: 235 MRGSGAAGYLTTGKPATVSNRATQFL 260 >gi|116074593|ref|ZP_01471854.1| Glutamate racemase [Synechococcus sp. RS9916] gi|116067815|gb|EAU73568.1| Glutamate racemase [Synechococcus sp. RS9916] Length = 265 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 101/257 (39%), Gaps = 12/257 (4%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL+ + +Y+ D PYG+ ++ + + L Sbjct: 6 GLFDSGVGGLTVLRSILQRHGPVPTVYLGDTARVPYGSRSPAEIRSIAAEVVA-WLKHQH 64 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNT L ++ + +G + A T + +L+TPAT+ Sbjct: 65 VSTVVMACNTTNALA-RDVAEGQAGVPVVGLIGAAAAMVRET---RVGVLATPATVASGA 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 I + + + +E + E+++E G + ++ Sbjct: 121 YRQSIEALNPGTLVVQQACPNFVPLIESG----DLSSQELREEAMGYLTPLLEASVEAVI 176 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALFLS 253 L CTHYPL+ + R L P V +D ++ +AR+ LL + ++ L ++ Sbjct: 177 LGCTHYPLLEPLLRSLLPPDVRLIDPAEGVARQLDALLGYPIPGRPERPLSLENTRLCVT 236 Query: 254 GKPDIAMRRLMQGFGLK 270 P+ RR G + Sbjct: 237 ADPESFARRATPWLGAR 253 >gi|85703353|ref|ZP_01034457.1| Glutamate racemase [Roseovarius sp. 217] gi|85672281|gb|EAQ27138.1| Glutamate racemase [Roseovarius sp. 217] Length = 270 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 103/266 (38%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL V + +P+ F+Y+ D+ PYG + + + Sbjct: 2 AVGIFDSGLGGLTVWDAVSKRLPDVPFVYLGDNAHTPYGVRDADDIYDLTTTSVDRLFAA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+R + + + + +EE + + E ++ ++ Sbjct: 121 NVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ + VL CTHYPL+ VF+ V + +A L R ++ Sbjct: 179 A--LKRKMPHPEAAVLGCTHYPLVQEVFQDALGPDVAVYSQPNLVASSLADYLGRH-PNK 235 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + A +G P R Q Sbjct: 236 IGAGTESAFLTTGDPKRVSSRATQFL 261 >gi|161870616|ref|YP_001599789.1| glutamate racemase [Neisseria meningitidis 053442] gi|161596169|gb|ABX73829.1| glutamate racemase [Neisseria meningitidis 053442] gi|325198860|gb|ADY94316.1| glutamate racemase [Neisseria meningitidis G2136] Length = 239 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 94/232 (40%), Gaps = 8/232 (3%) Query: 39 YHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRST 98 + IY D PYG ++ M + +L+ + VIACNT + ++R Sbjct: 2 ENIIYFGDTARVPYGTKSKATIENFSMQIVDFLLE-HDVKAMVIACNTIAAVAGQKIRQK 60 Query: 99 FPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI 157 +M L + A K A A T++ I I++T T+ + IH + ++ + Sbjct: 61 TGNMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPL 120 Query: 158 LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217 L VEE ++ + + ++ + D +VL CTH+PL+ + + + V Sbjct: 121 LVPLVEEGWLEHEVTRLTVCEYLKPLLAD----GIDTLVLGCTHFPLLKPLIGREA-HNV 175 Query: 218 DWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268 +D++ + A +L + T D+ ++S P + G Sbjct: 176 ALVDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 227 >gi|126462361|ref|YP_001043475.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17029] gi|189030365|sp|A3PK37|MURI_RHOS1 RecName: Full=Glutamate racemase gi|126104025|gb|ABN76703.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17029] Length = 270 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + + + Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ T+ LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + +E+ + E ++ +E Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +++ +L CTHYPL+ +F++ V ++ +A L R Sbjct: 179 A--LKRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFA 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G+P + Q Sbjct: 237 G-AGTESKFLTTGEPRSVSNKATQFL 261 >gi|146276946|ref|YP_001167105.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17025] gi|189030366|sp|A4WQY6|MURI_RHOS5 RecName: Full=Glutamate racemase gi|145555187|gb|ABP69800.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17025] Length = 270 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 99/266 (37%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + + + Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFALTCAATERLWAE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALKRMQESWIPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + +E+ + E ++ +E Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +++ +L CTHYPL+ F++ V ++ +A L R Sbjct: 179 A--LKRRMPHPQAAILGCTHYPLMEATFQEALGPEVTVYSQANLVAESLADYLARRPEFV 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + + +G P + Q Sbjct: 237 GQGTES-KFLTTGDPRSVSNKATQFL 261 >gi|292669543|ref|ZP_06602969.1| glutamate racemase [Selenomonas noxia ATCC 43541] gi|292648752|gb|EFF66724.1| glutamate racemase [Selenomonas noxia ATCC 43541] Length = 262 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 5/240 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL VL R ++P F++ AD PYG A++ + F ++++ Sbjct: 3 IALFDSGIGGLTVLSHARRVLPSEDFLFFADRDHVPYGTKSVPAVRGFVREAFHFLVEQQ 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA ++ DE+R + ++ +G PA+K+A + + +TP T+ Sbjct: 63 KADTVVVACNTATSVAVDEMRRLY-AVPIIGMEPAVKKALERDTERRVLVTATPITVNGE 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI +Y + I L++ L EE + ++ + + I Sbjct: 122 KLRRLISAYDTGGCIDLLALPRLVEFAEE----REFVSPRVENYLRSALAPYDLINYSAI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ RQ+ P V ++D ++ F SG+ Sbjct: 178 VLGCTHFNYFKDTLRQIMPQTVGFVDGNEGTVEELARRTNLRTVPAGERKAHCTFFESGR 237 >gi|126737902|ref|ZP_01753632.1| glutamate racemase [Roseobacter sp. SK209-2-6] gi|126721295|gb|EBA17999.1| glutamate racemase [Roseobacter sp. SK209-2-6] Length = 269 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 100/266 (37%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y AD PYG + + + +++ K Sbjct: 2 AVGIFDSGLGGLTVLNAAQSRLPDVDFLYYADSARAPYGVRDAEDIYQLTKKAVAEMWSK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ P LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQEEGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVEVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +E+ + + E ++ ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DLILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ +L CTHYPL+ F+ V +A L R Q Sbjct: 179 A--LKRKMPEPQAAILGCTHYPLMEQDFQAALGEGVKVFSQGALVADSLADYLERH--PQ 234 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 F +G P R Q Sbjct: 235 MLGSGTGGYFTTGDPAKVSNRATQFL 260 >gi|320095955|ref|ZP_08027573.1| glutamate racemase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977112|gb|EFW08837.1| glutamate racemase [Actinomyces sp. oral taxon 178 str. F0338] Length = 275 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 21/273 (7%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I IFDSG+GGL V + + +P+ +Y+ D PYG ++ Sbjct: 1 MDNAP--------IGIFDSGLGGLTVARAVIDKLPDEEVVYLGDTRHTPYGPRPVAQVRT 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYT 118 + L +IACNTA + R + + + + PA +QA T Sbjct: 53 YTLACLDQ-LASMGVKALIIACNTATAAALADARERYWVDAGIPVIEVITPAARQAVTAT 111 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 ++G I ++ T AT++ S+++ + V + VE E++ Sbjct: 112 RNGRIGVIGTRATIQSEAYSHVLAA-VPGLSLTQRECPRFVEFVEAGIT----TGAELEA 166 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRI 237 + D +VL CTHYPL+ V ++ V + +S++ A L R Sbjct: 167 VATQYLAPLKEAGVDTLVLGCTHYPLLTGVIGRVMGEEVALVTSSEATANLTYNELVDRD 226 Query: 238 NTHQTR--VFDDHALFLSGKPDIAMRRLMQGFG 268 H+ R H + +G R + G Sbjct: 227 LLHEPRGGASPRHHFYSTGGSGDFGRLARRFLG 259 >gi|297205618|ref|ZP_06923014.1| glutamate racemase [Lactobacillus jensenii JV-V16] gi|297150196|gb|EFH30493.1| glutamate racemase [Lactobacillus jensenii JV-V16] Length = 265 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 98/266 (36%), Gaps = 17/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P + VL+K+ +P +++ D PYG+ + + Sbjct: 1 MDNRPIGLLDSGLGGL--------TVLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L K + + ACNTA + ++ + +G + AA T++ Sbjct: 53 LTRKSVDFLLSK-NVKVIIFACNTATAAAMEVIQKEI-APKIIGVIQSGSLAAAKITKNN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++++ T T+ S I + +++ LA VE D ++ ++ Sbjct: 111 KVAVIGTHVTIESHAYSKEIKFRNPDIKVTELATPKLAPLVEAQ-RDFAYNVDVVRDSLD 169 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +GK D +VL CTHYP+I ++ + +D +D +A+ +L R Sbjct: 170 S----LKGKDFDTMVLGCTHYPIIEKEISEIVGSTIKLVDPADQVAQYTENILKRDGMLA 225 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 H + +G + Sbjct: 226 GEK-GKHEYYTTGDCKKFTEIARKWL 250 >gi|86138828|ref|ZP_01057400.1| glutamate racemase [Roseobacter sp. MED193] gi|85824475|gb|EAQ44678.1| glutamate racemase [Roseobacter sp. MED193] Length = 269 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL+ + +P+ F+Y AD PYG + + +D+ K Sbjct: 2 AVGIFDSGLGGLTVLKAAQSRLPDVDFLYYADSARAPYGVRDAEDIFNLTKAAVNDMWSK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ P LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQEEGLPAGKRVLGVFVPLIEAMTERQWGDNSPPREVEVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +E+ + + E ++ ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGIVDAIEDG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ + +L CTHYPL+ F+ V + +A L R Sbjct: 179 A--LKRKMPEPEAAILGCTHYPLMEKEFQAALGAGVKVFSQGNLVADSLADYLDRHPDMI 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + F +G P R Q Sbjct: 237 G--TGNGGYFTTGDPARVSDRATQFL 260 >gi|123965917|ref|YP_001010998.1| putative aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. MIT 9515] gi|123200283|gb|ABM71891.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. MIT 9515] Length = 264 Score = 235 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 11/258 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I IFDSGIGG +L + + Y+AD PYG+ + ++ + + Sbjct: 1 MKVKIGIFDSGIGGFTILDYLLKTRKDLEIFYLADTKRVPYGDKDFEQIRIIAKEICNWF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 DK L V ACNT D L + + I + I +L+TPAT Sbjct: 61 EDKNLDALLV-ACNTTNACALDILENHLG----IPVFDLINSVSEIVSKKCIGVLATPAT 115 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +Y +I S + + S +E+ K+ +++ + K Sbjct: 116 IKTSYYKKIIESKGENIKVFQQACPEFVSEIEK----TKLNLNKLNYLSDSYLNPLFKKN 171 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249 + I+L CTHYPLI +V P + +D S ++ + L+P+ + + + ++ Sbjct: 172 IEEIILGCTHYPLIFNVLENKIPSNIKIIDPSVALVNKFNNSFLIPKNDCNNSISQENVK 231 Query: 250 LFLSGKPDIAMRRLMQGF 267 F++ K + +++ Sbjct: 232 FFVTSKSEEFSKKVKYWL 249 >gi|315606165|ref|ZP_07881193.1| glutamate racemase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312123|gb|EFU60212.1| glutamate racemase [Actinomyces sp. oral taxon 180 str. F0310] Length = 276 Score = 235 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 99/264 (37%), Gaps = 14/264 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P+ IY+ D PYG+ ++ + ++ Sbjct: 3 NAPIGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGSRAIAQVRSLTLSALDELA 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYTQSGLISILST 128 + L + NTA + R + + + + PA +Q+ + T++ + ++ T Sbjct: 63 SRGVKALVIAC-NTATAAALADARERYWIDAGIPVIEVITPAARQSVSATRNRHVGVIGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT++ + + V + + VE DEI+ + Sbjct: 122 KATIQSEAYLRALAA-VPGLRVTQQACPAFVDFVEAGVT----TGDEIEAVATEYLTPLK 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH----QTRV 244 D ++L CTHYPL+ V ++ V + +S++ A L Sbjct: 177 AAGVDTLILGCTHYPLLTGVISRVMGDGVTLVTSSEATANMTYNELVDRALLHDPWSEGA 236 Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268 +H +G D + G Sbjct: 237 RPEHQFLATGASDAFPLLARRFLG 260 >gi|256852216|ref|ZP_05557602.1| glutamate racemase [Lactobacillus jensenii 27-2-CHN] gi|260661752|ref|ZP_05862663.1| glutamate racemase [Lactobacillus jensenii 115-3-CHN] gi|282932656|ref|ZP_06338070.1| glutamate racemase [Lactobacillus jensenii 208-1] gi|256615262|gb|EEU20453.1| glutamate racemase [Lactobacillus jensenii 27-2-CHN] gi|260547499|gb|EEX23478.1| glutamate racemase [Lactobacillus jensenii 115-3-CHN] gi|281303230|gb|EFA95418.1| glutamate racemase [Lactobacillus jensenii 208-1] Length = 265 Score = 235 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 98/266 (36%), Gaps = 17/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P + VL+K+ +P +++ D PYG+ + + Sbjct: 1 MDNRPIGLLDSGLGGL--------TVLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 +L K + + ACNTA + ++ + +G + AA T++ Sbjct: 53 LTRKSVDFLLSK-NVKVIIFACNTATAAAMEVIQKEI-APQIIGVIQSGSLAAAKITKNN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++++ T T+ S I + +++ LA VE D ++ ++ Sbjct: 111 KVAVIGTHVTIESHAYSKEIKFRNPDIKVTELATPKLAPLVEAQ-RDFAYNVDVVRDSLD 169 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +GK D +VL CTHYP+I ++ + +D +D +A+ +L R Sbjct: 170 S----LKGKDFDTMVLGCTHYPIIEKEISEIVGSTIKLVDPADQVAQYTENILKRDGMLA 225 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 H + +G + Sbjct: 226 GEK-GKHEYYTTGDCKKFTEIARKWL 250 >gi|148242257|ref|YP_001227414.1| glutamate racemase [Synechococcus sp. RCC307] gi|147850567|emb|CAK28061.1| Glutamate racemase [Synechococcus sp. RCC307] Length = 292 Score = 235 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 98/253 (38%), Gaps = 10/253 (3%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL+++ P +YV D PYG+ + ++ + L + Sbjct: 32 GLFDSGLGGLTVLRRLLSQRPGQRCVYVGDTARVPYGSRDRAEIRCIAAEVVG-WLREQG 90 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNT L D +S + LG + A+ A Q I +L+T AT Sbjct: 91 AEAVVMACNTTNALALDVAQSEA-GVPVLGLIDAV---ARQVQQQRIGVLATEATASSGA 146 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 + + I + VE + ++ +++ + R + IV Sbjct: 147 YGRALQAQRQGLTIVEMGCPAFVPAVEAH----QLDTPALRRAAQRYLEPLLDARVEAIV 202 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFLSGK 255 L C+HYPL+ + R L P V+ +D + ++ L P + +G Sbjct: 203 LGCSHYPLLEPMLRDLLPAGVELIDPAHALVDLTLSLFPDQRRPAIEPDLSGCRVVATGD 262 Query: 256 PDIAMRRLMQGFG 268 P + G Sbjct: 263 PAEFAAGSARWLG 275 >gi|260575249|ref|ZP_05843249.1| glutamate racemase [Rhodobacter sp. SW2] gi|259022509|gb|EEW25805.1| glutamate racemase [Rhodobacter sp. SW2] Length = 270 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 99/266 (37%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL ++ +PE F+Y+ D+ PYG + + + Sbjct: 2 AVGVFDSGLGGLTVLDALQKRLPEVPFVYLGDNAHAPYGVRTAEDIFNLTCAAVERLWAE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ P LG + +A Q G Sbjct: 62 G-CDLVILACNTASASALKRMQESWVPPGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + +E+ + E ++ +E Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +++ VL CTHYPL+ H+F + V ++ +A L R Sbjct: 179 A--LKRRMPLPQAAVLGCTHYPLMQHIFAEALGPGVKVYSQANLVAESLADYLTRRPEFL 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 +G P R Q Sbjct: 237 GSGTAS-KFLTTGDPAAVSNRATQFL 261 >gi|296116308|ref|ZP_06834924.1| glutamate racemase [Gluconacetobacter hansenii ATCC 23769] gi|295977127|gb|EFG83889.1| glutamate racemase [Gluconacetobacter hansenii ATCC 23769] Length = 278 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 137/259 (52%), Gaps = 4/259 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL FDSGIGGL +++ +R +P Y+AD FPYG D L R++ L + + Sbjct: 3 ILAFDSGIGGLGIVRCLRTDLPGARIDYLADTAVFPYGEQADDFLVTRILTLVGQAIARL 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P L VIACNTA TL D LR+ + F+G VP IK AA TQSG I +L+T ATL R Sbjct: 63 RPDLVVIACNTASTLALDALRARHR-LPFVGCVPPIKWAADLTQSGTIGLLATRATLTRP 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y SNL + + C + + LA E G + E I+ E++G F + G DV+ Sbjct: 122 YLSNLRNRFAPGCTLITYGARNLADLSELAFRGRPVPERAIRMEMDGLFSQPGGDAIDVV 181 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDHALFLS 253 L CTHY ++ F++L + W+D + +++R+A L + T + HA F + Sbjct: 182 GLGCTHYTFLLDRFQRLGRPGLRWIDPAQAVSRQATRLAHNLGTVAAKGPYQPGHAFFTA 241 Query: 254 GKPDI-AMRRLMQGFGLKS 271 D+ A+ ++ G + Sbjct: 242 LPQDMGALLPGLRHMGYDA 260 >gi|257784875|ref|YP_003180092.1| glutamate racemase [Atopobium parvulum DSM 20469] gi|257473382|gb|ACV51501.1| glutamate racemase [Atopobium parvulum DSM 20469] Length = 277 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 7/230 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL+ + MP F Y D PYG + +R + +D+ Sbjct: 11 IGVFDSGVGGMSVLKHLVAQMPHETFHYFGDSAFAPYGTKPKEQIAQRSSVIAKKFIDEG 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L VIACNTA DELR+ +P ++ +G PA+K A G + +L+T ATL Sbjct: 71 AKAL-VIACNTATAAAADELRAAYPYLSIVGVEPALKPAVTAYPHGTVIVLATKATLSLQ 129 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 NL + + L +E + +++ K + G+ D + Sbjct: 130 KYHNLESRLHPSAKVISIPGEGLVELIESG----QTDSEQLHKRLTELLGGYTGQ-VDAV 184 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 VL CTHYP I + V++ D A + + LL + N ++ Sbjct: 185 VLGCTHYPFIKKQISSVLG-NVEFFDGGAGAAHQLKRLLKQANLLTSKEN 233 >gi|304438688|ref|ZP_07398626.1| glutamate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368337|gb|EFM22024.1| glutamate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 262 Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 5/250 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG GGL VL R ++P FI+ AD PYG A++ + F ++++ Sbjct: 3 IALFDSGYGGLTVLSHARRVLPSEEFIFYADRDHVPYGTKSVPAVRGFVRTAFRFLIEQQ 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA ++ DE+R + + +G PA+K+A + + +TP T+ Sbjct: 63 RADAVVVACNTATSVAVDEMRRLY-DVPIIGMEPAVKKALTRDAEHRVLVTATPITVHGE 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI S + L++ L E + ++ + F I Sbjct: 122 KLKRLISSCDPNGLVDLLALPQLVEFAERQ----EFVSSAVEAYLRDAFAPYRFADYSAI 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ RQL P V +D ++ F SG+ Sbjct: 178 VLGCTHFNYFKDTMRQLLPQNVRLVDGNEGTVEELARRTGLRTQPIGAQTAHCTFFESGR 237 Query: 256 PDIAMRRLMQ 265 + L Sbjct: 238 SIVRAEELAH 247 >gi|154507589|ref|ZP_02043231.1| hypothetical protein ACTODO_00069 [Actinomyces odontolyticus ATCC 17982] gi|153797223|gb|EDN79643.1| hypothetical protein ACTODO_00069 [Actinomyces odontolyticus ATCC 17982] Length = 276 Score = 234 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 98/264 (37%), Gaps = 14/264 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P+ IY+ D PYG ++ + ++ Sbjct: 3 NAPIGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGPRAIAQVRSLTLSALDELA 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYTQSGLISILST 128 + L + NTA + R + + + + PA +Q+ T++ + ++ T Sbjct: 63 SRGVKALVIAC-NTATAAALADARERYWIDAGIPVVEVITPAARQSVIATRNHHVGVIGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT++ + + V + + VE +EI+ + Sbjct: 122 KATIQSEAYLRALAA-VPGLTVSQQACPAFVDFVEAGVT----TGEEIEAVAREYLTPLK 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----V 244 D ++L CTHYPL+ V ++ V + +S++ A L Sbjct: 177 EAGVDTLILGCTHYPLLTGVIGRIMGERVTLVTSSEATANVTYNELVDRGLLHDPWPAGE 236 Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268 H +G D+ R + G Sbjct: 237 GPQHQFLATGASDLFPRLARRFLG 260 >gi|332185464|ref|ZP_08387212.1| glutamate racemase [Sphingomonas sp. S17] gi|332014442|gb|EGI56499.1| glutamate racemase [Sphingomonas sp. S17] Length = 286 Score = 234 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 3/257 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 IL FDSG+GGL + R +P F+YVAD GFPYG + + R+ L + + Sbjct: 26 RPILFFDSGVGGLSIAGPARMALPTAPFVYVADSAGFPYGEKSEAEIAGRVPALLGRLAE 85 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +Y+P L VIACNTA T+ +R+ + +G VPAIK AA +++ I +L T AT+R Sbjct: 86 RYRPRLIVIACNTASTIALPAVRAAL-DLPVVGTVPAIKPAALMSETRTIGVLGTRATVR 144 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + Y +L + S C + S L E G + + ++G F ++ G+ D Sbjct: 145 QAYVDDLAARFASDCRVIRHGSAALVELAEAKLRGETLSSESFTAVLDGLFGQEGGEAID 204 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 VIV ACTH+PL+ +P PV ++D IARR L + R + A+F Sbjct: 205 VIVNACTHFPLVEAELAAAAPHPVRFVDGGPGIARRIAFLTQGQDWPADR-GEGVAVFTH 263 Query: 254 -GKPDIAMRRLMQGFGL 269 G+ + A+R + G Sbjct: 264 LGEREAALRPGLALRGF 280 >gi|293189259|ref|ZP_06607982.1| glutamate racemase [Actinomyces odontolyticus F0309] gi|292821722|gb|EFF80658.1| glutamate racemase [Actinomyces odontolyticus F0309] Length = 276 Score = 234 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 98/264 (37%), Gaps = 14/264 (5%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I IFDSG+GGL V + + +P+ IY+ D PYG ++ + ++ Sbjct: 3 NAPIGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGPRAIAQVRSLTLSALDELA 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYTQSGLISILST 128 + L + NTA + R + + + + PA +Q+ T++ + ++ T Sbjct: 63 SRGVKALVIAC-NTATAAALADARERYWIDAGIPVVEVITPAARQSVIATRNHHVGVIGT 121 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT++ + + V + + VE +EI+ + Sbjct: 122 KATIQSEAYLRALAA-VPGLTVSQQACPAFVDFVEAGVT----TGEEIEAVAREYLTPLK 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----V 244 D ++L CTHYPL+ V ++ V + +S++ A L Sbjct: 177 EAGVDTLILGCTHYPLLTGVIGRIMGERVTLVTSSEATANVTYNELVDRGLLHDPWPAGD 236 Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268 H +G D+ R + G Sbjct: 237 GPQHQFLATGASDLFPRLARRFLG 260 >gi|254475982|ref|ZP_05089368.1| glutamate racemase [Ruegeria sp. R11] gi|214030225|gb|EEB71060.1| glutamate racemase [Ruegeria sp. R11] Length = 269 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 97/266 (36%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + + + ++ Sbjct: 2 AVGIFDSGLGGLTVLDAAQRRLPDVDFLYYGDNARAPYGVRDAEDVFQLTNNAVNAMWER 61 Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYT-----------QSG 121 L ++ACNTA ++ LG + +A ++ Sbjct: 62 G-CDLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTEREWGDNSPPREVETK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + S L +E+ + + + +K ++ Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQSCGGLVDAIEDG--DMILADALVKSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ +L CTHYPL+ F+ V +A L R Q Sbjct: 179 ALL--RKMPNPQAAILGCTHYPLMEDAFQAALGPKVKVFSQGALVAESLADYLTRH--PQ 234 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 A +G + R Q Sbjct: 235 MLGTGGSAYLTTGDANRVSTRATQFL 260 >gi|157164289|ref|YP_001466834.1| glutamate racemase [Campylobacter concisus 13826] gi|166231029|sp|A7ZDH6|MURI_CAMC1 RecName: Full=Glutamate racemase gi|112801263|gb|EAT98607.1| glutamate racemase [Campylobacter concisus 13826] Length = 262 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 9/242 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL + + E+ F+Y AD PYG + K ++ K Sbjct: 3 IGIFDSGLGGLSVLNEALSKLSEHEFLYYADVKNVPYGQKSRDEILKFSFDAVKFLV-KN 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133 V+ACNTA ++ ELR+ S+ +G PA+K+A + +++TP T+ Sbjct: 62 GAKAVVVACNTATSVAIKELRANL-SVPIIGMEPAVKKAHDLSHDDALKTLVIATPVTVN 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 LI + ++ L++ L + E+ + + + +K ++ ++ + + D Sbjct: 121 GAKLKELIINLNAKDKTELLALPRLVNFAEK----AEFESENVKSYLKEELVKFDLSKFD 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +VL CTH+ R++ P V +D ++ +R L + + + F S Sbjct: 177 FLVLGCTHFNYFKDSLREILPPNVSIIDGNEGTIKRLISELG-LKISSVNLTPNVKFFYS 235 Query: 254 GK 255 G+ Sbjct: 236 GE 237 >gi|33865544|ref|NP_897103.1| putative aspartate and glutamate racemase:glutamate racemase [Synechococcus sp. WH 8102] gi|33632713|emb|CAE07525.1| Putative Aspartate and glutamate racemases:Glutamate racemase [Synechococcus sp. WH 8102] Length = 262 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 11/261 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + FDSG+GGL VL+++ +Y+ D PYGN +++ + + Sbjct: 1 MSPRLGFFDSGVGGLTVLRRVLERHGSVACVYLGDTARVPYGNRPPAEIRRIAAEVVGWL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 D+ Q V+ACNT L +D +G + A AAA ++ + +L+TPAT Sbjct: 61 RDQ-QVSTVVMACNTTNALARDVAEGQAGG-PVIGLIGA---AAAMVETRRVGVLATPAT 115 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + S I + + + +E DE+++ + Sbjct: 116 VASAAYSASIEALHPGALVVEQACPAFVPLIEAG----DFSSDELRQVAKVYLEPLLAAS 171 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249 + IVL CTHYPL++ + +QL P + +D + +AR+ +L PR T Sbjct: 172 VETIVLGCTHYPLLIPLLKQLLPDAIQLVDPALGVARQLDAVLGVPRSTPGDTLELGQCR 231 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 ++ PD R G + Sbjct: 232 FCVTADPDGFANRATPWLGAR 252 >gi|148556725|ref|YP_001264307.1| glutamate racemase [Sphingomonas wittichii RW1] gi|148501915|gb|ABQ70169.1| glutamate racemase [Sphingomonas wittichii RW1] Length = 264 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 78/221 (35%), Positives = 120/221 (54%), Gaps = 1/221 (0%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 IL+FDSG+GGL VL R L+P+ ++YVAD+ GFPYG + + R+ L ++ Sbjct: 4 DRPILMFDSGVGGLSVLAPTRALLPQASYVYVADNGGFPYGIRSEAEIAARVPALLGRLV 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++Y+P L VIACNTA T+ +R+ + +G VPAIK AA + + I +L T AT+ Sbjct: 64 ERYRPRLVVIACNTASTIALAAVRAAL-DLPIVGTVPAIKPAAERSAARAIGVLGTDATV 122 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R+ Y +L + + C + S L E G + + ++G + G R Sbjct: 123 RQPYVDDLSARFAADCLVLRHGSARLVELAEAKLRGEPTDPADYRAVLDGLLGQPGGDRI 182 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 D++VLACTH+PL+ +P P+ ++D IARR L Sbjct: 183 DMVVLACTHFPLVEAELAAAAPRPLRFVDGGPGIARRVAHL 223 >gi|227894671|ref|ZP_04012476.1| glutamate racemase [Lactobacillus ultunensis DSM 16047] gi|227863510|gb|EEJ70931.1| glutamate racemase [Lactobacillus ultunensis DSM 16047] Length = 268 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 11/243 (4%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 V++K+ +P I++ D+ PYGN + +L L +IACNTA Sbjct: 18 VVKKVIKKLPNESTIFIGDNAHMPYGNRTKEDIINLTRKSVKFLL-NNDVKLVIIACNTA 76 Query: 88 FTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146 D + +G + AA T++ +++++T T+ IH Sbjct: 77 TAAAMDTIEKEI-DPQVIGVIQSGALAAARTTKNKKVAVVATSVTIASHAYEKEIHFRDP 135 Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 + + +++ LA VE + ++ +GK D +VL CTHYPLI Sbjct: 136 EIKVTELAAPKLAPLVEAQE-----DHATNLRVVKESLAPLQGKDFDTLVLGCTHYPLIK 190 Query: 207 HVFRQLS-PWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALFLSGKPDIAMRRLM 264 F + V LD +D +A+ ++ R + R H + +G PD +L Sbjct: 191 REFTEAVDDPKVTILDPADQVAQYTFNVMRRDGLFSEERHKAVHKYYTTGNPDNF-DKLA 249 Query: 265 QGF 267 + F Sbjct: 250 RTF 252 >gi|159903573|ref|YP_001550917.1| putative aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. MIT 9211] gi|159888749|gb|ABX08963.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. MIT 9211] Length = 267 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 110/260 (42%), Gaps = 11/260 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ + IFDSG+GGL VL+ + + + +Y+AD PYG ++ + L + Sbjct: 1 MKPLLGIFDSGVGGLTVLKNVLYRHGDLSAVYLADTARIPYGVKSPLEIQTIALGLVEWL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + VL+V ACNT +L ++ + S+ +G + ++ + I +L+TP+T Sbjct: 61 NMQNISVLAV-ACNTTDSLAIKIVKQ-YSSVPVVGLIDSVGDLVFES---RIGVLATPST 115 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + +I + + + +E +I +E + + Sbjct: 116 TESRAYTKVIMASNPNAFVIEQACPAFVPLIETG----QINSNEFQIVAKNYLKPLIDSN 171 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDDHA 249 + I+L C+HYPL+ ++L P V +D S ++++ L+ + F + Sbjct: 172 VEAIILGCSHYPLLKSRLQELLPKHVRLIDPSIGLSQKLDDLIGYQSFVEKSIPTFCNVR 231 Query: 250 LFLSGKPDIAMRRLMQGFGL 269 + + R+ + G+ Sbjct: 232 FCATSDSEGFASRISRWLGI 251 >gi|332297563|ref|YP_004439485.1| Glutamate racemase [Treponema brennaborense DSM 12168] gi|332180666|gb|AEE16354.1| Glutamate racemase [Treponema brennaborense DSM 12168] Length = 282 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 72/243 (29%), Positives = 112/243 (46%), Gaps = 7/243 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 DSG GGL ++ ++ PE +Y+AD FPYG + + + I+ K+Q Sbjct: 6 AFLDSGTGGLPYMRYLKQQCPEARCVYLADTFHFPYGEKSVSQIIRYATDVSDLIIRKWQ 65 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 P VIACNT D LR FP F+G VPA+KQAAA T++G+I +L+T T+R Y Sbjct: 66 PKAVVIACNTMSVTALDSLRKRFPQTPFIGTVPAVKQAAACTRNGIIGLLATTRTVRDPY 125 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + C + L +E E K+ ++ + D ++ Sbjct: 126 TDALIRKFAPGCTVVRRGDGALIDFIEHRLVSAPDAER--KRAVQPAADFFKSHGADTVI 183 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRINTHQTR--VFDDHALF 251 L CTH+ I ++ V +D+ + R+A + +PR R + D F Sbjct: 184 LGCTHFVHIADDIQEAVGRGVSVIDSRSGVVRQALKVAFTVPRAGKAAEREPLPADGTFF 243 Query: 252 LSG 254 ++G Sbjct: 244 VTG 246 >gi|33240493|ref|NP_875435.1| glutamate racemase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238021|gb|AAQ00088.1| Glutamate racemase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 267 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 11/261 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ + IFDSGIGG VL+ ++ + IY+AD P+G + +++ + + S Sbjct: 1 MKLRLGIFDSGIGGFTVLKSIQERHSSFRSIYLADTQRVPFGTKQPSEIRQIALEI-SKW 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + V+ACNT ++ D +++ I + I IL+TP+T Sbjct: 60 LCRQNINAVVVACNTTNSVALDVVKNNVEVP----VFDLIGSTSELIHESRIGILATPST 115 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + S I S + +E +I E++ I + Sbjct: 116 VASKAYSKEILSSKPFSFVLEEGCPEFVPMIERG----QINSSEVRGAIVNHLEPLIKEN 171 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQ-TRVFDDHA 249 + IVL C+H+PL+ +F++L P + +D S ++A++ L+ P +N R D Sbjct: 172 VEAIVLGCSHFPLLKPIFKELMPSNIRLIDPSLNLAKKLDTLITPSVNEVDLARKPIDIH 231 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 ++ P + G++ Sbjct: 232 FCVTSDPSQFSDKASHWLGIR 252 >gi|149204811|ref|ZP_01881774.1| Glutamate racemase [Roseovarius sp. TM1035] gi|149141780|gb|EDM29833.1| Glutamate racemase [Roseovarius sp. TM1035] Length = 270 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 101/266 (37%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL V + +PE +Y+ D+ PYG + + + Sbjct: 2 AVGIFDSGLGGLTVWDAVSKRLPEVPLVYLGDNAHAPYGVRDADDIYDLTTSSVERLFAA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+R + + + + +E+ + + E ++ ++ Sbjct: 121 NVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ + VL CTHYPL+ VF+ V + +A L R + Sbjct: 179 A--LKRKMPHPEAAVLGCTHYPLVQEVFQDALGPDVAVYSQPNLVASSLADYLGRH-PDK 235 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + A +G P R Q Sbjct: 236 IGAGAEAAFLTTGDPKRVSSRATQFL 261 >gi|330994654|ref|ZP_08318577.1| Glutamate racemase [Gluconacetobacter sp. SXCC-1] gi|329758295|gb|EGG74816.1| Glutamate racemase [Gluconacetobacter sp. SXCC-1] Length = 279 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 88/254 (34%), Positives = 136/254 (53%), Gaps = 4/254 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 IL FDSGIGGL V+ ++R L+P Y+AD +PYG D L+ R++ L + + Sbjct: 4 ILAFDSGIGGLGVVAQLRALLPGVPIDYLADTAVYPYGEQPDALLRHRIVTLLGQAIARL 63 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P + VIACNTA TL D LR+T+ + F+G VP IK AA +T++G I +L+T AT+RR Sbjct: 64 RPSVVVIACNTASTLALDSLRATY-GIPFVGCVPPIKWAADHTRTGTIGLLATRATVRRP 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y +L + +C + + LA E G+ ++ E++G F + G DV+ Sbjct: 123 YLQDLHARFAPRCTLLAHGARGLADMAERAFRGLPPDRTQLAIELDGLFGQPGGAAIDVV 182 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALFLSG 254 + CTHY ++ R+ P V WLD + ++AR+A +L + + F + Sbjct: 183 GIGCTHYTFLLDALRESGPAGVTWLDPAPAVARQAARVLTEQAPAIPCATGGERVCFTAL 242 Query: 255 KPDIAMRRLMQGFG 268 PD L+ G G Sbjct: 243 PPDFPA--LLPGLG 254 >gi|124023594|ref|YP_001017901.1| aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. MIT 9303] gi|123963880|gb|ABM78636.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. MIT 9303] Length = 268 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 10/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ + +FDSG+GGL VL+++ + +Y+ D PYGN H ++ + + Sbjct: 1 MKPRLGLFDSGLGGLTVLRRVLERHGQVSCLYLGDTARVPYGNRMPHEIRVIAKEVVQWL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 D+ Q V+ACNT L D + + V I+ AA + +L+TPA Sbjct: 61 RDQ-QVTAVVMACNTTNALASDVAEAVAGGIPV---VRLIEAAANMLSEARVGVLATPAA 116 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 I + +E ++ +E+ + + Sbjct: 117 AASGAYGKQIEISRPGTMVIEQGCPAFVPLIETG----QLSSEELYQAAREYLNPLLAAQ 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249 + +VL CTHYPL+ + RQ+ P V +D + +AR LL P I + Sbjct: 173 VEAVVLGCTHYPLLEPILRQILPQDVRLIDPAIGVARELDVLLGSPTIPLGTSLSLTSTR 232 Query: 250 LFLSGKPDIAMRRLMQGFG 268 ++ P+ R G Sbjct: 233 FCVTANPEGFATRATPWLG 251 >gi|99080963|ref|YP_613117.1| glutamate racemase [Ruegeria sp. TM1040] gi|123077676|sp|Q1GHL1|MURI_SILST RecName: Full=Glutamate racemase gi|99037243|gb|ABF63855.1| glutamate racemase [Ruegeria sp. TM1040] Length = 269 Score = 232 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 100/266 (37%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ D+ Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVDFLYYGDNSHAPYGVRDAEDIYELTHKAVHDMWDR 61 Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ LG + +A Q G Sbjct: 62 G-CNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + E +K ++ Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVKSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ R + +L CTHYPL+ VF++ V +A L R Sbjct: 179 ALL--RKMPRPEAAILGCTHYPLMEDVFQKALGPDVQVFSQGRLVADSLAHYLERRPEMI 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G + R Q Sbjct: 237 G--GGNAGYVTTGNANRVSSRATQFL 260 >gi|221639366|ref|YP_002525628.1| glutamate racemase [Rhodobacter sphaeroides KD131] gi|221160147|gb|ACM01127.1| Glutamate racemase [Rhodobacter sphaeroides KD131] Length = 266 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 19/263 (7%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 +FDSG+GGL VL ++ +PE F+Y D+ PYG + + + + Sbjct: 1 MFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAEG-C 59 Query: 78 VLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG-----------LIS 124 L ++ACNTA ++ T+ LG + +A Q G ++ Sbjct: 60 DLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVKHVA 119 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 + +TPAT+ + + + +E+ + E ++ +E Sbjct: 120 LFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVEA-- 175 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 +++ +L CTHYPL+ +F++ V ++ +A L R Sbjct: 176 LKRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFAG-A 234 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 + +G P + Q Sbjct: 235 GTESKFLTTGDPRSVSNKATQFL 257 >gi|261749317|ref|YP_003257002.1| glutamate racemase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497409|gb|ACX83859.1| glutamate racemase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 271 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 103/251 (41%), Gaps = 12/251 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSGIGGL++ ++++ MP IY D PYGN ++ M + S + + Sbjct: 7 SPIGIFDSGIGGLLIAKEIKNYMPNECIIYFGDTKNMPYGNKSKEFIRNHSMKIASFLYE 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131 K VIACN+ + D ++ F + P +K + S I I++TPAT Sbjct: 67 KK-CKAIVIACNSIVSNALDVIQKNFLKKILIFNVIEPIVKNKVLIS-SKRIGIMATPAT 124 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R + I Y I +S+ +LA+ +E KI ++ + + Sbjct: 125 IRSNFYQKNIKRYCPHLDIVQISTPLLATIIENGFEKKKI------NYLKNYLNHFKSIK 178 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHA 249 D ++LACTHY + V +D + + + L N + ++ Sbjct: 179 IDTLLLACTHYLFLKKEIDNFFHGKVRLIDIQKIVVQEIQKKLYENNLLCLHSTWNNNPI 238 Query: 250 LFLSGKPDIAM 260 + S Sbjct: 239 FYTSSSISPFF 249 >gi|33862666|ref|NP_894226.1| putative aspartate and glutamate racemase:glutamate racemase [Prochlorococcus marinus str. MIT 9313] gi|33634582|emb|CAE20568.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. MIT 9313] Length = 268 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 10/259 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ + +FDSG+GGL VL+++ + +Y+ D PYGN H ++ + + Sbjct: 1 MKPRLGLFDSGVGGLTVLRRVLERHGQVPCLYLGDTARVPYGNRMPHEIRVIAKEVVQWL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 D+ Q V+ACNT L D + + V I+ AA + +L+TPA Sbjct: 61 RDQ-QVTAVVMACNTTNALASDVAEAVAGRIPV---VRLIEAAANMLSEERVGVLATPAA 116 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 I + +E ++ +E+ + + Sbjct: 117 AASGAYGKQIEISRPGTMVIEQGCPAFVPLIETG----QLSSEELYQAAREYLNPLLAAQ 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249 + +VL CTHYPL+ + RQ+ P V +D + +AR LL P I + Sbjct: 173 VEAVVLGCTHYPLLEPILRQILPQDVRLIDPAIGVARELDVLLGSPTIPLGTSLSLTSTR 232 Query: 250 LFLSGKPDIAMRRLMQGFG 268 ++ P+ R G Sbjct: 233 FCVTANPEGFATRATPWLG 251 >gi|305432470|ref|ZP_07401632.1| glutamate racemase [Campylobacter coli JV20] gi|304444509|gb|EFM37160.1| glutamate racemase [Campylobacter coli JV20] Length = 253 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 15/251 (5%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + ++ I +FDSG+GGL VL+ + IY D PYG + + K + Sbjct: 1 MLEDIKMKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIVKFCLEA 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLIS 124 D K+ + +IACNTA D LR G + A +A A ++ I Sbjct: 61 L-DFFSKFNIDMLIIACNTASAYALDALRLKA-DFPIYGVIDAGVEATKKALLDKNKKIL 118 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +++T AT++ N + ++ +++ + VEE ++ + ++ +G Sbjct: 119 VIATKATIQSKEYQNRLQKQGFN-NVDALATGLFVPMVEEGIFEGELLQSAMRYYFKGI- 176 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + D ++LACTH+PL+ + + + D+I + R Sbjct: 177 -----ETPDALILACTHFPLLANSLSVYFGSKTKLIHSGDAIVEFLK---QRQKLLLKEE 228 Query: 245 FDDHALFLSGK 255 + S Sbjct: 229 KAKLHFYASSD 239 >gi|254462580|ref|ZP_05075996.1| glutamate racemase [Rhodobacterales bacterium HTCC2083] gi|206679169|gb|EDZ43656.1| glutamate racemase [Rhodobacteraceae bacterium HTCC2083] Length = 270 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 97/264 (36%), Gaps = 19/264 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL R +P+ F+Y AD PYG + + +R + Sbjct: 2 AVGVFDSGLGGLTVLDAARARLPDVPFVYYADSAHAPYGVRDSEDIYQRTKKAVGYLWA- 60 Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ LG + +A + G Sbjct: 61 NGCDLVILACNTASAAALRRMQEAGVPKGKRVLGVFVPLIEALTEREWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++I +TPAT+ + + + + +E+ + + E ++ +E Sbjct: 121 EVAIFATPATIASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ +L CTHYPL+ F+ V + +A L R Sbjct: 179 A--LKRKMPEPQAAILGCTHYPLMETHFQAALGEDVKVYSQAGLVAESLADYLERRPDF- 235 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQ 265 H F SG P Q Sbjct: 236 IGSGKMHRYFTSGDPARVSDHATQ 259 >gi|315638310|ref|ZP_07893491.1| glutamate racemase [Campylobacter upsaliensis JV21] gi|315481657|gb|EFU72280.1| glutamate racemase [Campylobacter upsaliensis JV21] Length = 248 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 93/258 (36%), Gaps = 15/258 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + + Sbjct: 3 IGVFDSGVGGLSVLKSLYEANLFEEIIYYGDTARVPYGVKDKETIIKFCLEAL-EFFKSF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132 + + +IACNTA + LR+ G + A +A + I +++T AT+ Sbjct: 62 KIDMLIIACNTASAYALEALRARA-DFPIYGVIEAGVRATCKNLEDKDKEILVIATKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + +++ + VEE + +K F K+ K Sbjct: 121 NSRQYQINLEKE-GFTRVKALATGLFVPMVEEGIFEGEF----LKSAFLHYF--KDVKSP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++LACTH+PL+ + + + ++I R + F Sbjct: 174 DALILACTHFPLLSKALSEFFGSKTRLIHSGEAIVEFLR---ENSHFKLLDKRAKLRFFA 230 Query: 253 SGKPDIAMRRLMQGFGLK 270 S + L Sbjct: 231 SSDIKSLEKTAKIWLNLS 248 >gi|57241965|ref|ZP_00369905.1| glutamate racemase [Campylobacter upsaliensis RM3195] gi|57017157|gb|EAL53938.1| glutamate racemase [Campylobacter upsaliensis RM3195] Length = 248 Score = 231 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 15/258 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL VL+ + IY D PYG + + K + + + Sbjct: 3 VGVFDSGVGGLSVLKSLYEANLFEEIIYYGDTARVPYGVKDKETIIKFCLEAL-EFFKSF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA---AYTQSGLISILSTPATL 132 + + +IACNTA + LR+ G + A +A + I +++T AT+ Sbjct: 62 KIDMLIIACNTASAYALEALRARA-DFPIYGVIEAGVRATCKNLQDKDKEILVIATKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + +++ + VEE + +K F K+ K Sbjct: 121 NSKQYQISLKKE-GFTRVKALATGLFVPMVEEGIFEGEF----LKSAFLHYF--KDVKSP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++LACTH+PL+ + + + ++I R + F Sbjct: 174 DALILACTHFPLLSKALSEFFGSKTRLIHSGEAIVEFLR---ENSHFKLLDKRAKLRFFA 230 Query: 253 SGKPDIAMRRLMQGFGLK 270 S + L Sbjct: 231 SSDIKTLEKTAKIWLNLS 248 >gi|57168788|ref|ZP_00367919.1| glutamate racemase [Campylobacter coli RM2228] gi|57019835|gb|EAL56518.1| glutamate racemase [Campylobacter coli RM2228] Length = 247 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 15/243 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + D K+ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIVKFCLEAL-DFFSKF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132 + +IACNTA D LR G + A +A A ++ I +++T AT+ Sbjct: 62 NIDMLIIACNTASAYALDALRLKA-DFPIYGVIDAGVEATKKALLDKNKKILVIATKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + VEE ++ + ++ +G + Sbjct: 121 QSKEYQNRLQKQGFN-NVDALATGLFVPMVEEGIFEGELLQSAMRYYFKGI------ETP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++LACTH+PL+ + + + D+I + R + Sbjct: 174 DALILACTHFPLLANSLSVYFGSKTKLIHSGDAIVEFLK---QRQKLLLKEEKAKLHFYA 230 Query: 253 SGK 255 S Sbjct: 231 SSD 233 >gi|222823123|ref|YP_002574696.1| glutamate racemase [Campylobacter lari RM2100] gi|222538344|gb|ACM63445.1| glutamate racemase [Campylobacter lari RM2100] Length = 246 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 95/254 (37%), Gaps = 14/254 (5%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL+ + +IY D PYG + + K + + + + Sbjct: 4 GVFDSGVGGLSVLKSLLQAKLFKEYIYYGDTARVPYGVKDKETIIKFSLEAL-EFFKEKK 62 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATLR 133 + +IACNT + L++ S LG + A A + ++ I +++T AT+ Sbjct: 63 VDMLIIACNTVSAHALEILKANA-SFPVLGVIEAGVLAVKNSLEDKNSNILVIATQATVD 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + ++ + VEE K + K + Sbjct: 122 SHAYKRALIKE-GFLKVEEKATGLFVPMVEEGIFQGDF-----LKAAFEYYFNKLKFHPN 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++LACTH+PLI H + + + ++IA + + N + + + S Sbjct: 176 ALILACTHFPLIAHSLSEYFGKNTKLIHSGEAIALQLQ---QEFNLTSIQEEANVEFYAS 232 Query: 254 GKPDIAMRRLMQGF 267 + + Sbjct: 233 SDVEKLKKIANLWL 246 >gi|86149468|ref|ZP_01067699.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596590|ref|ZP_01099827.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 84-25] gi|218563241|ref|YP_002345021.1| glutamate racemase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11386947|sp|Q9PM24|MURI_CAMJE RecName: Full=Glutamate racemase gi|85840250|gb|EAQ57508.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191431|gb|EAQ95403.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 84-25] gi|112360948|emb|CAL35749.1| glutamate racemase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926846|gb|ADC29198.1| glutamate racemase [Campylobacter jejuni subsp. jejuni IA3902] gi|315927597|gb|EFV06928.1| glutamate racemase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929474|gb|EFV08670.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 305] Length = 250 Score = 230 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 104/257 (40%), Gaps = 15/257 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + D +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-DFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132 Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT+ Sbjct: 62 QIDMLIIACNTASAYALDALRAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + S +I+ +++ + VEE + D ++ +E F K Sbjct: 121 KSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++LACTH+PL+ + + + D+I + R N + Sbjct: 174 DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFYA 230 Query: 253 SGKPDIAMRRLMQGFGL 269 S + L Sbjct: 231 SSDVESLKNTAKIWLNL 247 >gi|148925791|ref|ZP_01809479.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845801|gb|EDK22892.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8486] Length = 247 Score = 230 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 104/257 (40%), Gaps = 15/257 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + D +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-DFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132 Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT+ Sbjct: 62 QIDMLIIACNTASAYALDALRAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + S +I+ +++ + VEE + D ++ +E F K Sbjct: 121 KSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++LACTH+PL+ + + + D+I + R N + Sbjct: 174 DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFYA 230 Query: 253 SGKPDIAMRRLMQGFGL 269 S + L Sbjct: 231 SSDVESLKNTAKIWLNL 247 >gi|299137116|ref|ZP_07030299.1| glutamate racemase [Acidobacterium sp. MP5ACTX8] gi|298601631|gb|EFI57786.1| glutamate racemase [Acidobacterium sp. MP5ACTX8] Length = 267 Score = 230 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 11/254 (4%) Query: 12 LQNSI-LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 + + I +FDSG GGL VL+ + L+P H+IY+ D PYG+ + + + Sbjct: 1 MSSPIIGVFDSGFGGLTVLRALLPLVPGAHYIYLGDTARLPYGSKSQTTIARYAVESA-R 59 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L++ L VIACNTA L E+R+ P ++ A S + +L+T A Sbjct: 60 FLEERGSDLLVIACNTATALALPEIRAAVSVPVVGVIEPVVRAANLQHPSAEVLVLATTA 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ L H + +L VEE + D ++ +E K Sbjct: 120 TVQSHAY--LQHCEALGLRATEKACPLLVPLVEEGWIDHPVTRDVLRIYLEEALATCSPK 177 Query: 191 RTDVIVLACTHYPLIVHVFR---QLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 ++L CTHYPL+ + + +D++ + A P +T + Sbjct: 178 ---AVLLGCTHYPLLAPLVETTLRELGSQAVVIDSAQATAAEVETHFP-TSTPSSSDAAT 233 Query: 248 HALFLSGKPDIAMR 261 F + + R Sbjct: 234 FECFATDSVEKFQR 247 >gi|295692284|ref|YP_003600894.1| glutamate racemase [Lactobacillus crispatus ST1] gi|295030390|emb|CBL49869.1| Glutamate racemase [Lactobacillus crispatus ST1] Length = 268 Score = 230 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 11/243 (4%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 V +K+ +P +++ D+ PYG+ + + + +LDK L + ACNTA Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRTKEEIIELVRKSVQFLLDK-NVKLIIFACNTA 76 Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRRTYTSNLIHSYVS 146 + +++ +G + + AA T++ ++++ST AT + I Sbjct: 77 TAMAMSTIQAEI-DPQIIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIRFRDP 135 Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 + + +++ LA VE + K ++ +GK D +++ CTHYPLI Sbjct: 136 EIQVTELAAPKLAPLVEAQK-----DHETNLKVVKESLTPLQGKDFDTLIMGCTHYPLIQ 190 Query: 207 HVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLM 264 F++ V LD +D +A+ ++ R H + +G P + RL Sbjct: 191 KEFKEAINDKNVTILDPADQVAQYTFNVMRRDGLFSDGNEKVSHEYYTTGDP-TSFDRLA 249 Query: 265 QGF 267 + F Sbjct: 250 RTF 252 >gi|157415872|ref|YP_001483128.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81116] gi|157386836|gb|ABV53151.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81116] gi|307748509|gb|ADN91779.1| Glutamate racemase [Campylobacter jejuni subsp. jejuni M1] gi|315931379|gb|EFV10348.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 327] Length = 247 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 15/257 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132 Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT+ Sbjct: 62 QIDMLIIACNTASAYALDALRAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + S +I+ +++ + VEE + D ++ +E F K Sbjct: 121 KSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++LACTH+PL+ + + + D+I + R N + Sbjct: 174 DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFYA 230 Query: 253 SGKPDIAMRRLMQGFGL 269 S + L Sbjct: 231 SSDVESLKNTAKIWLNL 247 >gi|259419026|ref|ZP_05742943.1| glutamate racemase [Silicibacter sp. TrichCH4B] gi|259345248|gb|EEW57102.1| glutamate racemase [Silicibacter sp. TrichCH4B] Length = 269 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 20/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ D+ Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVDFLYYGDNSHAPYGVRDAEDIYQLTHKAVHDMWDR 61 Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ LG + +A Q G Sbjct: 62 G-CNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +E+ + + E +K ++ Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVKSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++ R + +L CTHYPL+ +F++ V +A L R Sbjct: 179 ALL--RKMPRPEAAILGCTHYPLMEDIFQKALGPDVQVFSQGRLVADSLAHYLERRPDMI 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 +G R Q Sbjct: 237 GGGAAG--YLTTGNAGRVSSRATQFL 260 >gi|57238663|ref|YP_179794.1| glutamate racemase [Campylobacter jejuni RM1221] gi|86152895|ref|ZP_01071100.1| glutamate racemase [Campylobacter jejuni subsp. jejuni HB93-13] gi|57167467|gb|AAW36246.1| glutamate racemase [Campylobacter jejuni RM1221] gi|85843780|gb|EAQ60990.1| glutamate racemase [Campylobacter jejuni subsp. jejuni HB93-13] gi|315059102|gb|ADT73431.1| Glutamate racemase [Campylobacter jejuni subsp. jejuni S3] Length = 247 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 17/258 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131 Q + +IACNTA D LR + FP + G IK A + ++ I +++T AT Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIK--ALHDKNKEILVIATKAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + S +I+ +++ + VEE + D ++ +E F K Sbjct: 120 IKSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITT 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++LACTH+PL+ + + + D+I + R N + Sbjct: 173 PDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFY 229 Query: 252 LSGKPDIAMRRLMQGFGL 269 S + L Sbjct: 230 ASSDVESLKNTAKIWLNL 247 >gi|282856714|ref|ZP_06265980.1| glutamate racemase [Pyramidobacter piscolens W5455] gi|282585479|gb|EFB90781.1| glutamate racemase [Pyramidobacter piscolens W5455] Length = 267 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 8/257 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + + +FDSG+GG V+++++ ++P +Y D PYGN + + + + Sbjct: 5 SPVGVFDSGVGGFSVVKEIQKVLPGEDVLYYGDSANMPYGNRSGEEILHLTRQILAFLER 64 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + +V ACNT +L D R +P + A + A + + ++ T T R Sbjct: 65 RGVKAAAV-ACNTISSL-IDRYRDDYP-FKIFSVIEAGAASVATLDADCVGVIGTVFTAR 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 LI++ + ++ LA ++ + + E++ +E + + Sbjct: 122 SGAYHRLINAVRPEMKVYAQGCPNLARLIDGGDLRPESIDPELRAAVEPLLAQAPIRH-- 179 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L CTHYPL+ +L P + +D + A + L L S Sbjct: 180 -LILGCTHYPLVSGYLNRLYP-QLTLIDPAHEQALAVKRFLESQGLLNDAGSGSLELNTS 237 Query: 254 GKPDIAMRRLMQGFGLK 270 G + FGLK Sbjct: 238 GDA-AQYAEAARRFGLK 253 >gi|283957038|ref|ZP_06374510.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 1336] gi|283791539|gb|EFC30336.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 1336] Length = 247 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 15/257 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132 Q + +IACNTA D L++ G + A +A A + ++ I +++T AT+ Sbjct: 62 QIDMLIIACNTASAYALDALKAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + +I+ +++ + VEE + D ++ +E F K Sbjct: 121 KSEEYQKRLL-FQGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++LACTH+PL+ + + + D+I + R N + Sbjct: 174 DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFYA 230 Query: 253 SGKPDIAMRRLMQGFGL 269 S + L Sbjct: 231 SSDVESLKNTAKIWLNL 247 >gi|238855622|ref|ZP_04645923.1| glutamate racemase [Lactobacillus jensenii 269-3] gi|260665318|ref|ZP_05866166.1| glutamate racemase [Lactobacillus jensenii SJ-7A-US] gi|282933004|ref|ZP_06338398.1| glutamate racemase [Lactobacillus jensenii 208-1] gi|238831766|gb|EEQ24102.1| glutamate racemase [Lactobacillus jensenii 269-3] gi|260560822|gb|EEX26798.1| glutamate racemase [Lactobacillus jensenii SJ-7A-US] gi|281302858|gb|EFA95066.1| glutamate racemase [Lactobacillus jensenii 208-1] Length = 266 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 98/266 (36%), Gaps = 17/266 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P + VL+K+ +P +++ D PYG+ + + Sbjct: 1 MDNRPIGLLDSGLGGL--------TVLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + +L K + + ACNTA + ++ + +G + AA T++ Sbjct: 53 LTRRSVNFLLSK-NVKVIIFACNTATAAAMEVIQKEI-TPQIIGVIQSGSLAAARTTKNN 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 ++++ T T+ S I + +++ LA VE D ++ ++ Sbjct: 111 KVAVIGTHVTIESHAYSREIKFRNPDIEVTELATPQLAPLVEAQ-RDYAYNIDVVRDSLD 169 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + K D +VL CTHYP+I ++ + +D +D +A+ +L R Sbjct: 170 S----LKEKEFDTMVLGCTHYPIIEKEISKVVGSTIKLVDPADQVAQYTENVLKRDGMLA 225 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + + +G + Sbjct: 226 GKK-GKREYYTTGDCQKFTEIARKWL 250 >gi|152996178|ref|YP_001341013.1| glutamate racemase [Marinomonas sp. MWYL1] gi|189030362|sp|A6VX99|MURI_MARMS RecName: Full=Glutamate racemase gi|150837102|gb|ABR71078.1| glutamate racemase [Marinomonas sp. MWYL1] Length = 275 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 6/221 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG GGL +L + P +Y+ADD PYG+ L+ RL+ + Sbjct: 3 VGVMDSGAGGLTILNAIHQKHPYLDLVYLADDAFAPYGSKSITQLQDRLVK-VGRFFENE 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACNTA D LR++ S+ +G PA+K A ++ +++L+TP T Sbjct: 62 KVCAIVVACNTATVAAIDALRAS-TSLPIIGVEPAVKPAFRLSKKRRVAVLATPVTAESP 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + LI + H+ ++SS+ LA ++ + E+++K+ IE E + D + Sbjct: 121 RLNQLIDLWKEDSHVSIMSSLTLAFDIDAW----PETEEKVKQTIEQLSQEMLAQNIDTL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 VLACTHYPL+ H+F Q+ + ++ S+ + + L Sbjct: 177 VLACTHYPLVKHLFEQILGDECEIIEPSEGVTAQLIRRLTE 217 >gi|86152334|ref|ZP_01070545.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 260.94] gi|85840823|gb|EAQ58074.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 260.94] Length = 247 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 17/258 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131 Q + +IACNTA D LR + FP + G IK A + ++ I +++T AT Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIK--ALHDKNKEILVIATKAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + S +I+ +++ + VEE + D ++ +E F K Sbjct: 120 IKSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITT 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++LACTH+PL+ + + + D+I + R N + Sbjct: 173 PDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFY 229 Query: 252 LSGKPDIAMRRLMQGFGL 269 S + L Sbjct: 230 ASSDVESLKNTAKIWLNL 247 >gi|209542243|ref|YP_002274472.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5] gi|209529920|gb|ACI49857.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5] Length = 272 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 1/228 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + IL FDSGIGG +++ +R +P Y+AD+ +PYG D L +R++ L Sbjct: 1 MARRILAFDSGIGGFGIVRALRTRLPGVSLDYLADNAVYPYGEQPDTDLIRRIVALIGQA 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +D P L VIACNTA TL LR + ++ F+G VP IK AA +++ I +L+T AT Sbjct: 61 IDALDPDLVVIACNTASTLALPALRERY-ALPFVGCVPPIKWAAELSRTRTIGLLATRAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +RR Y +L Y C + + LA E G I D I +E++ F + G Sbjct: 120 VRRPYLGDLQRRYAPDCTLLAHGARGLADLAECAFRGHAIATDAIDRELDALFGQPGGAA 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 DV+ + CTHY ++ R SP WLD ++++AR+A +L + T Sbjct: 180 IDVVGIGCTHYTFLMDRLRAASPPGTIWLDPAEAVARQAATVLGPLGT 227 >gi|94497599|ref|ZP_01304168.1| Glutamate racemase [Sphingomonas sp. SKA58] gi|94423016|gb|EAT08048.1| Glutamate racemase [Sphingomonas sp. SKA58] Length = 279 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 79/259 (30%), Positives = 126/259 (48%), Gaps = 3/259 (1%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 IL FDSG+GGL +L +R ++P +Y AD GFPYG + + R+ L + Sbjct: 17 ADAPILFFDSGVGGLSILAPVRDMLPTASIVYAADSAGFPYGTKSEAEIAARVPALLGRL 76 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++Y+P L+VIACNTA T+ +R+ + +G VPAIK AA +++ + +L T AT Sbjct: 77 VERYRPRLAVIACNTASTIALQHVRAAL-DIPVVGTVPAIKPAALLSKNRIFGVLGTDAT 135 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R+ Y L + + C + S L E G + + + G + G+R Sbjct: 136 VRQPYVDRLAAEHGADCIVLRHGSAALVQLAEAKLRGEPLDPRVARAALAGLTTQPGGQR 195 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D++VLACTH+PL+ +P + ++ D IARR L T A+F Sbjct: 196 MDMVVLACTHFPLVEAELAAAAPHSLGFVHGGDGIARRI-AFLTEGQTWPAEPTPGTAVF 254 Query: 252 LSGK-PDIAMRRLMQGFGL 269 +R + +GL Sbjct: 255 TRLDAQQERLRPALARYGL 273 >gi|153952642|ref|YP_001398928.1| glutamate racemase [Campylobacter jejuni subsp. doylei 269.97] gi|152940088|gb|ABS44829.1| glutamate racemase [Campylobacter jejuni subsp. doylei 269.97] Length = 247 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 15/257 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132 Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT+ Sbjct: 62 QINMLIIACNTASAYALDVLRAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + Y +I+ +++ + VEE + D ++ +E F K Sbjct: 121 KSEEYQKRLL-YQGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++LACTH+PL+ + + + D+I + R N + Sbjct: 174 DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFYA 230 Query: 253 SGKPDIAMRRLMQGFGL 269 S + L Sbjct: 231 SSDVESLKNTAKIWLNL 247 >gi|255659131|ref|ZP_05404540.1| glutamate racemase [Mitsuokella multacida DSM 20544] gi|260848578|gb|EEX68585.1| glutamate racemase [Mitsuokella multacida DSM 20544] Length = 260 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 7/240 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGGL VL ++P+ F++ AD+ PYG +K + F ++ Sbjct: 3 IAFFDSGIGGLSVLHHAMRVLPKEQFVFYADEDNVPYGVKTTDEVKGFVQQAFDFLV-GC 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA ++ E+R + + +G PA K+A + + +TP T+ Sbjct: 62 DVKAIVVACNTATSVAVREMRHRY-DIPIIGMEPAAKKALDLDGEHRVLVAATPITVHGK 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 LI + + L+ L E + + + + + + Sbjct: 121 KMQILIDRFDKDHLVDLLPLPRLVEFAER----EEFRSEAVHAYLAQELGRFHLADYSAL 176 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTH+ R++ P + ++D ++ R L + + + + SG+ Sbjct: 177 VLGCTHFNYFKDTMREIMPENMHFVDGNEGTVRELIRQLDARHELED-LPQTVDYYYSGR 235 >gi|94676801|ref|YP_588621.1| glutamate racemase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219951|gb|ABF14110.1| glutamate racemase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 274 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 8/267 (2%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K +ILI DSG+GGL + +++ ++P +++YV D+ FPYG + RL+ + Sbjct: 4 KKNKLPTILIVDSGVGGLSIFYQIKKIIPNANYLYVFDNEAFPYGEKTKRFIINRLIIII 63 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + + + L +IACNTA L LR F +G +PAIK A T S +I +L+T Sbjct: 64 NAVRKLHYVDLIIIACNTASILALKALRQYF-FYPIIGVLPAIKLATTITNSKVIGLLAT 122 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ Y +N I++Y I + + L + VE G KI +++ + + Sbjct: 123 TATINSKYITNSINNYKKSYKIISLKAPELVNLVEAKLHGEKISLLSLREILFPWLKTSQ 182 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INTHQTRVFD 246 + D I+L CTH+PLI + + P + +D ++A R LL + IN++Q+ +F Sbjct: 183 TYKLDTIILGCTHFPLIYEELKLILPTSIKIIDAHQTVANRV-FLLSKKFINSNQSSIFT 241 Query: 247 DHALFL---SGKPDIAMRRLMQGFGLK 270 + + + K + L+Q +G Sbjct: 242 INKTYCPIINNKIKLLKPYLLQ-YGFN 267 >gi|253582420|ref|ZP_04859643.1| glutamate racemase [Fusobacterium varium ATCC 27725] gi|251835959|gb|EES64497.1| glutamate racemase [Fusobacterium varium ATCC 27725] Length = 263 Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 108/259 (41%), Gaps = 11/259 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 ++SI IFDSGIGGL +L+K+R L+P + IY D PY ++ + Sbjct: 2 NKESSIGIFDSGIGGLTILKKIRELLPRENIIYYGDWKNNPYSEKSKEDIQNLSAKIMDF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTP 129 ++ + VI C+ D L+S + ++ +G + +K A ++ I+++ + Sbjct: 62 LI-RNNCKAVVIGCSIFSAASLDFLKSQY-NIPIIGMIEGGVKSAILESKQKKIAVMGSA 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ I ++ +S L + +E+ + EI ++ + Sbjct: 120 FTIKSNVYEESIKEIDPNITVYQISCKALCAMLEKGWENYPD-----RMEILESYLCQIP 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDH 248 D ++L THYP I++ R+ +D+S A +L + + + Sbjct: 175 DTADTLILGGTHYPFILNDIRKFF--SKKIVDSSVESAIELFRVLGQEDLLREGYKKGRI 232 Query: 249 ALFLSGKPDIAMRRLMQGF 267 +++G ++ Q F Sbjct: 233 EFYINGDKEVFKNVAEQLF 251 >gi|307298986|ref|ZP_07578788.1| glutamate racemase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915411|gb|EFN45796.1| glutamate racemase [Thermotogales bacterium mesG1.Ag.4.2] Length = 273 Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 11/255 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPE-YHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSGIGGL VL+++ +PE F Y AD PYG+ L++ + +F D+ Sbjct: 7 IGVFDSGIGGLTVLKRLVETLPEGVSFHYFADTARVPYGSKPVETLRRYVREIF-DLFAH 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLR 133 V ACNT+ +++ ++ F P +++ + ++I++T T++ Sbjct: 66 LNVDAIVTACNTSDSILTQSDKAELGVPYFSIIDPTVRRIGESAPGNSTVAIIATENTVK 125 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 ++ + Y S I + + +EE +I + ++ + D Sbjct: 126 KSLYLRKLFRYESFSKIVQKACPLFVPLIEEGIWEGEI----VDSIVKYYLNDFAEIEPD 181 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L CTHYP I + + P +D S+ I R ++ + V ++S Sbjct: 182 FMILGCTHYPFIKNSIERFLPSKTKVVDPSEYIVRDVADWATILSPEPSTVD----YYVS 237 Query: 254 GKPDIAMRRLMQGFG 268 G I L + G Sbjct: 238 GNTRIFQDILKRYLG 252 >gi|295696096|ref|YP_003589334.1| glutamate racemase [Bacillus tusciae DSM 2912] gi|295411698|gb|ADG06190.1| glutamate racemase [Bacillus tusciae DSM 2912] Length = 285 Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 8/240 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I ++DSG+GGL VL MPE+ ++Y D + PYG+ ++ + ++ + Sbjct: 3 IGMYDSGVGGLTVLAAFVRHMPEHDYVYFGDTLHAPYGDRTAEEVRALSLAAVKQLVAR- 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V+ACNT+ ++ D L + +P + L + A+ A + I++L+T T+ Sbjct: 62 NIDLLVVACNTSASVAVDALVNHYPDLPVLTLLDAVGPAVRHLPGRKIALLATRRTVEAG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +HS + V++ L +E + ++ DV+ Sbjct: 122 VFEARLHSARPDAAVRSVAAPALVPLIERGVKDPAVYGPF----LDSYLKPLATWGADVL 177 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 VL CTHYPLI + P +D + +AR R + L SG Sbjct: 178 VLGCTHYPLIADQIQSRVP-HTLLIDPATHLARHVAE--KRDAFPASSSAGSVTLLASGD 234 >gi|237751612|ref|ZP_04582092.1| glutamate racemase [Helicobacter bilis ATCC 43879] gi|229372978|gb|EEO23369.1| glutamate racemase [Helicobacter bilis ATCC 43879] Length = 258 Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 100/221 (45%), Gaps = 12/221 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 N+I IFDSG GGL VL+ + + H +Y D PYGN + +++ + + Sbjct: 5 NNIGIFDSGAGGLTVLKSLIEEVGFNHIVYYGDTARVPYGNKDTETIRRFSLEAL-EFFS 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPA 130 + L V+ACNTA ++ + +G + + A + I +++T A Sbjct: 64 NFGLDLLVVACNTASAHALHAMQE-CSKIPIIGVIESGIAALTQQHIAKDKHILVIATEA 122 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + + +I +++ + S VEE+ ++ + ++ Sbjct: 123 TIKSDNYAKSLRNLGY-TNITSLATNLFVSLVEEHVFSGEVVDSVLRHYFPPTLKP---- 177 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 DV++L CTH+PL++ ++ V ++ + ++IA R Sbjct: 178 --DVVILGCTHFPLLLLPMQKYFGSDVKFIHSGEAIACYVR 216 >gi|227877591|ref|ZP_03995646.1| glutamate racemase [Lactobacillus crispatus JV-V01] gi|256844565|ref|ZP_05550051.1| glutamate racemase [Lactobacillus crispatus 125-2-CHN] gi|256849046|ref|ZP_05554479.1| glutamate racemase [Lactobacillus crispatus MV-1A-US] gi|262047528|ref|ZP_06020483.1| glutamate racemase [Lactobacillus crispatus MV-3A-US] gi|293381594|ref|ZP_06627581.1| glutamate racemase [Lactobacillus crispatus 214-1] gi|227862815|gb|EEJ70279.1| glutamate racemase [Lactobacillus crispatus JV-V01] gi|256613643|gb|EEU18846.1| glutamate racemase [Lactobacillus crispatus 125-2-CHN] gi|256713822|gb|EEU28810.1| glutamate racemase [Lactobacillus crispatus MV-1A-US] gi|260572104|gb|EEX28669.1| glutamate racemase [Lactobacillus crispatus MV-3A-US] gi|290921864|gb|EFD98879.1| glutamate racemase [Lactobacillus crispatus 214-1] Length = 268 Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 11/243 (4%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 V +K+ +P +++ D+ PYG+ + + + +L+K L + ACNTA Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRTKEEIIELVRKSVQFLLEK-NVKLIIFACNTA 76 Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRRTYTSNLIHSYVS 146 + +++ +G + + AA T++ ++++ST AT + I Sbjct: 77 TAMAMSTIQAEI-DPQIIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIRFRDP 135 Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 + + +++ LA VE + K ++ +GK D +++ CTHYPLI Sbjct: 136 EIQVTELAAPKLAPLVEAQK-----DHETNLKVVKESLTPLQGKDFDTLIMGCTHYPLIQ 190 Query: 207 HVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLM 264 F++ V LD +D +A+ ++ R H + +G P + L Sbjct: 191 KEFKEAINDKNVTILDPADQVAQYTFNVMRRDGLFSDGNEKVSHEYYTTGDP-TSFDHLA 249 Query: 265 QGF 267 + F Sbjct: 250 RTF 252 >gi|121612969|ref|YP_001001295.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176] gi|167006189|ref|ZP_02271947.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176] gi|87249921|gb|EAQ72880.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176] Length = 247 Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 17/258 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + IY D PYG + + K + + +++ Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61 Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131 Q + +IACNTA D LR + FP + G IK A + ++ I +++T AT Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIK--ALHDKNKEILVIATKAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + S +I+ +++ + VEE + D ++ +E F K Sbjct: 120 IKSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITT 172 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++LACTH+PL+ + + + D+I + R N + Sbjct: 173 PDALILACTHFPLLGCSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFY 229 Query: 252 LSGKPDIAMRRLMQGFGL 269 S + L Sbjct: 230 ASSDVESLKNTAKIWLNL 247 >gi|251773011|gb|EES53567.1| glutamate racemase [Leptospirillum ferrodiazotrophum] Length = 315 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 8/254 (3%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL+ L PE F+Y+ D FPYG+ A+ + + +L +Y+ Sbjct: 49 ALFDSGMGGLSVLRHFLELFPEEDFLYLGDMARFPYGSKSREAICRFAVEDAG-LLSRYR 107 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRT 135 PV V AC T + D L S FP + +G V A + A A T++G + +L T T+R Sbjct: 108 PVTLVAACFTVSSQALDILVSRFPEIRVVGMVEAGARAALAMTRTGHVGVLGTEGTIRSG 167 Query: 136 YTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + Q ++ +S + A VEE +I E ++ + +E D Sbjct: 168 AYPAIFQRLGGQETNVFGISCPLFAPMVEEGWIDGEIPERVAREYLAPI-VEGRTPDVDT 226 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 I+L CTHY + + + ++D +A + L R + + F++ Sbjct: 227 IILGCTHY-PPLLPLLRRILPHITFIDPGRELA---QAELLRSKPRTGQGKGHVSFFVTD 282 Query: 255 KPDIAMRRLMQGFG 268 + MR G Sbjct: 283 GRERFMRVGQHLLG 296 >gi|163749944|ref|ZP_02157189.1| glutamate racemase [Shewanella benthica KT99] gi|161330458|gb|EDQ01437.1| glutamate racemase [Shewanella benthica KT99] Length = 254 Score = 227 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 28/249 (11%) Query: 45 ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF 104 D+ PYG + L + L +D + K + VIACNTA TLI LR+ ++ Sbjct: 2 FDNARLPYGELAEQELISGCVALITDFVQKQSVSMVVIACNTASTLILPSLRAVL-NIPV 60 Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 +G VPAIK AA +++ I +L+TP T++R YT LI + S C + L ++ L E+ Sbjct: 61 VGVVPAIKPAALLSRNKHIGLLATPGTIKRAYTHELIAQFASGCSVELYATSELVMLAEQ 120 Query: 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224 A G + + E+ + + D +VL CTH+P++ ++ V LD+ Sbjct: 121 KAAGDPVTQQELAQILSPIL----ESELDTLVLGCTHFPILKQEMQEYLGDRVSLLDSGK 176 Query: 225 SIARRA--------------------RCLLPRINTHQTRV---FDDHALFLSGKPDIAMR 261 ++A R R ++ +++ A + S + ++ Sbjct: 177 AVAARVLTLKLQTQQEWVLAKQDNECRDVIRERVEQESKNMLYGTGLAYYTSEEIGQGLK 236 Query: 262 RLMQGFGLK 270 + + FGL Sbjct: 237 KTLAKFGLS 245 >gi|294676108|ref|YP_003576723.1| glutamate racemase [Rhodobacter capsulatus SB 1003] gi|294474928|gb|ADE84316.1| glutamate racemase [Rhodobacter capsulatus SB 1003] Length = 270 Score = 227 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 97/274 (35%), Gaps = 23/274 (8%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL V + + +PE F+Y D+ PYG + + D+ Sbjct: 2 AVGVFDSGLGGLTVYEAVSKRLPEVAFVYYGDNAHAPYGVRTPDDIYNLTCRGVQRLWDE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ + LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALKRMQEHWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + +E + E ++ +E Sbjct: 121 HVALFATPATVASRAFQRELAYRAIGVDVEAQPCGGVVDAIEAG--DEILAEALVRSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +++ + +L CTHYPL+ F++ V ++ +A L R Sbjct: 179 A--LKRRMPHPEAAILGCTHYPLMQKTFQEALGPQVKVYSQANLVAESLADYLTRKPEFL 236 Query: 242 TRVFDDHALFLSGKPDI----AMRRLMQGFGLKS 271 +G A + L ++ Sbjct: 237 G-PGTVSKFITTGDAASVSMHATQFLRHRISFEA 269 >gi|295691544|ref|YP_003595237.1| glutamate racemase [Caulobacter segnis ATCC 21756] gi|295433447|gb|ADG12619.1| glutamate racemase [Caulobacter segnis ATCC 21756] Length = 282 Score = 227 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 104/276 (37%), Gaps = 26/276 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P+ F Y+AD PYG + + D+ Sbjct: 2 IGVFDSGVGGLTVHRALVQRLPQADFTYLADQANAPYGVRTGEDIVALTKAGCEHLFDRG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF---------PSMAFLGAV-PAIKQAA---------- 115 + V+ACNTA + L+ T+ + LG + P I++A Sbjct: 62 A-SVVVLACNTASAIALRRLQQTWLPSYRKELGRPVNILGIIVPTIEKATGLPWEHEAER 120 Query: 116 ---AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 Q ++ + +T AT+R I + + L +E A + + Sbjct: 121 RGEKVEQLDILGVFATQATVRSRVYEIEIDKRKQDLAVFSEACPELVPLIEGDASAVDLA 180 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 + ++ +E + G+ D +VL CTHY +I +FR P + ++ A Sbjct: 181 K-AVQGHVEA-LKTRIGRYPDRVVLGCTHYEIIADIFRAALPAGTPLIQQPEATADALEL 238 Query: 233 LLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 L R + +G P + +G Sbjct: 239 YLERHPEYDPGQGGSRVFLTTGTPGPQNGLVQSFWG 274 >gi|78212667|ref|YP_381446.1| glutamate racemase [Synechococcus sp. CC9605] gi|123578331|sp|Q3AKJ1|MURI_SYNSC RecName: Full=Glutamate racemase gi|78197126|gb|ABB34891.1| Glutamate racemase [Synechococcus sp. CC9605] Length = 265 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 17/258 (6%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 FDSG+GGL VL+++ +Y+ D PYGN + +++ + + D+ Sbjct: 7 GFFDSGLGGLTVLRRVLERHGSVPCVYLGDTARVPYGNRQPDDIRRIAAEVVGWLRDQK- 65 Query: 77 PVLSVIACNTAFTLIKDEL--RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNT L +D ++ P + +G AAA ++ + +L+TPAT+ Sbjct: 66 VSTVVMACNTTNALARDVADGQAGAPVIGLIG------AAAAMVETRRVGVLATPATVAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + I + + + +E + D++++ + + Sbjct: 120 SAYRASIEALHPGSMVIEQACPAFVPLIESG----DMNSDDLRRAAQAYLEPLLAASVES 175 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT----HQTRVFDDHAL 250 IVL CTHYPL+V + RQL P V +D + +AR+ +L + + Sbjct: 176 IVLGCTHYPLLVPLLRQLLPESVQIIDPAIGVARQLDAVLRSPGPISAVPRPFSLESCRF 235 Query: 251 FLSGKPDIAMRRLMQGFG 268 ++ PD R G Sbjct: 236 CVTADPDGFAMRATPWLG 253 >gi|163803387|ref|ZP_02197262.1| glutamate racemase [Vibrio sp. AND4] gi|159172791|gb|EDP57636.1| glutamate racemase [Vibrio sp. AND4] Length = 237 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 9/233 (3%) Query: 40 HFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF 99 ++Y+ D+ +PYG E L R+ L + +++++Q + VIACNTA T++ LR+ Sbjct: 2 DYLYLFDNEAYPYGELEHDVLINRVNTLVAALVEEHQADIVVIACNTASTIVLPSLRANL 61 Query: 100 PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA 159 ++ +G VPAIK A+ G + +++TPAT+ R YT LI + + L+ S L Sbjct: 62 -AIPVVGVVPAIKPASLLASQG-VGLIATPATVTRQYTRELIRDFAQGKPVELLGSTRLV 119 Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 EE G I E++ + + DV VL CTH+PLI Q V Sbjct: 120 DMAEEKLRGQIIHIPELESILLPL-----RHKVDVAVLGCTHFPLIKDEIHQALGGDVML 174 Query: 220 LDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP--DIAMRRLMQGFGLK 270 +D+ +IARR R LL +T ++ S P + A+ + G Sbjct: 175 IDSGKAIARRVRALLASDKEQETAEEGSKKIYASASPWQEDALNACLANLGFN 227 >gi|291166140|gb|EFE28186.1| glutamate racemase [Filifactor alocis ATCC 35896] Length = 257 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I IFDSGIGGL VL ++P +FIY AD PYG ++ + + + + K Sbjct: 2 NIGIFDSGIGGLSVLHHALKIIPHANFIYYADRKNVPYGEKSVFEIQTFIDEIMNFFISK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132 VIACNTA ++ E R FP +G PA+K+A + I + +TP T+ Sbjct: 62 K-VDALVIACNTASSVATKEYRDKFP-FPIIGMEPAVKKAVETYTEKQQRILVAATPITI 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L++ L++ L E + E+++ I+ + Sbjct: 120 QGNKLRQLLNRVDKYHQADLIALPKLVHFAELK----QFDSLEVEEYIKTALNQYCAVDY 175 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 IVL CTH+ F+++ ++D ++ ++ LL + ++ + Sbjct: 176 SAIVLGCTHFNYFKPSFQRIFSKKTQFIDGNEGTIKQ---LLRKAPLIESY-SQSVQFYF 231 Query: 253 SGKP 256 SG P Sbjct: 232 SGIP 235 >gi|296136513|ref|YP_003643755.1| glutamate racemase [Thiomonas intermedia K12] gi|295796635|gb|ADG31425.1| glutamate racemase [Thiomonas intermedia K12] Length = 263 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 19/245 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ +R +P+ IYVAD PYG+ D L++R + ++ + Sbjct: 7 IGVFDSGVGGLTVLRALRAQLPQASLIYVADSAHAPYGDRPDDFLQQRARQITRFLIGQG 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFP-----SMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 ++ V + + F+G P IK A A + + + +L+TP+ Sbjct: 67 ARLIVV-------ACNTATAAAIAALRAEFDLPFVGIEPGIKPALARSDARRVGVLATPS 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TLR L+H++ + L LA VE ++ ++++ I Sbjct: 120 TLRSAKFRALLHTHAAAAEPVLQPCPGLADAVERG----DLQAPQVQQLIRQFCAPLRTA 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D +VL CTHYPL+ + V LD ++ +AR+A L + + + + L Sbjct: 176 GCDTVVLGCTHYPLLAEQIQAELGPQVHLLDTAEPVARQAARLWQQTSAQRPELP---QL 232 Query: 251 FLSGK 255 + +G Sbjct: 233 YTNGD 237 >gi|239618385|ref|YP_002941707.1| glutamate racemase [Kosmotoga olearia TBF 19.5.1] gi|239507216|gb|ACR80703.1| glutamate racemase [Kosmotoga olearia TBF 19.5.1] Length = 277 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 15/257 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMP-EYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSGIGG+ VL+++ +P F Y D PYG+ +KK + +F D Sbjct: 7 IGIFDSGIGGITVLRELMKSVPTGVRFHYFGDTARVPYGSKPPSEIKKYVHQVF-DFFRS 65 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132 V ACNT+ +++ E + + + F + + +A + ++I+ T T+ Sbjct: 66 LSVEAIVTACNTSDSILSKEEKKSL-EVPFFSIIDPVTEALKNDLPINSSVAIIGTRNTI 124 Query: 133 RRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R+ Y LI S + C I + + VEE + E ++ + G + Sbjct: 125 KRSLYLKKLIGS-DNICRISQKACPLFVPLVEEGVWEGTLAETIVRYYLRGI----KRFA 179 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTHYP ++ + V +D ++ +AR + + Q V + Sbjct: 180 PDYLILGCTHYPFLLKPIKTYLGEDVKVVDPAEYVAREFKAWIE---NQQNDVDSTVVFY 236 Query: 252 LSGKPDIAMRRL-MQGF 267 ++G+ L M GF Sbjct: 237 VTGEVVSFTESLKMMGF 253 >gi|290967732|ref|ZP_06559287.1| glutamate racemase [Megasphaera genomosp. type_1 str. 28L] gi|290782248|gb|EFD94821.1| glutamate racemase [Megasphaera genomosp. type_1 str. 28L] Length = 267 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 94/256 (36%), Gaps = 7/256 (2%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 K + I IFDSG+GGL V+ K+R L+P + IYV D PYG+ + + Sbjct: 3 KSKLPIGIFDSGVGGLTVVNKLRMLLPHENIIYVGDTKRNPYGSRTAAEILSYTRDIL-R 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 + L I CNT + +L P +G IK A + G I++ +T Sbjct: 62 FMSAQSVKLVAIGCNTVTATVYPQLMQEVP-YPLIGMSKGIKTAQKISAGGTIAVFATEL 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ ++ I LA +E +I ++ Sbjct: 121 TIANHSHKKAAAAWDPGLKIIEQPCPELAGLIERGYLQGT----KIMAPLQKYLAPVLQT 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-A 249 + D + CTH+P I +F LS + ++D + +A +L + + Sbjct: 177 QADTAIFGCTHFPFIQPLFEMLSQDRLAFVDPAHEMALEVLEVLKKADLLNRNSHSGTLQ 236 Query: 250 LFLSGKPDIAMRRLMQ 265 L + + Q Sbjct: 237 LCFTDATERGGMLAAQ 252 >gi|126726358|ref|ZP_01742199.1| glutamate racemase [Rhodobacterales bacterium HTCC2150] gi|126704221|gb|EBA03313.1| glutamate racemase [Rhodobacterales bacterium HTCC2150] Length = 270 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 97/266 (36%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL M+ +P+ F+Y D + PYG + + + ++ Sbjct: 2 AVGVFDSGLGGLTVLAAMQERLPDQAFVYYGDQINSPYGVRTPDDIYQLTAAATHSLWEQ 61 Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQEEGVPKGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TP+T+ + + + +E+ + + + ++ +E Sbjct: 121 NVALFATPSTVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEDG--DMMLADALVRSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +++ +L CTHYPL+ F+ V + +A L R Sbjct: 179 A--LKRRMPNPHAAILGCTHYPLMQSEFQDALGADVKVFSQAQVVADSLADYLERHPNM- 235 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 T + +G P R Q Sbjct: 236 TGQAKETKYLTTGDPTKVTMRATQFL 261 >gi|152991198|ref|YP_001356920.1| glutamate racemase [Nitratiruptor sp. SB155-2] gi|166231046|sp|A6Q504|MURI_NITSB RecName: Full=Glutamate racemase gi|151423059|dbj|BAF70563.1| glutamate racemase [Nitratiruptor sp. SB155-2] Length = 253 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 90/254 (35%), Gaps = 16/254 (6%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL V++ + IY D PYG + + + + + + + Sbjct: 4 GVFDSGVGGLTVVKSLLEHGLFDEIIYFGDTARVPYGPKDKNTIIRYSLE-AQEFFKNFD 62 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATLR 133 + + ACN+ +ELRS S +G + A I ++ T AT+ Sbjct: 63 VDILITACNSVSAHAIEELRSNA-SFPVIGVIEPGVLALQNRGLDPKSQILVIGTQATIG 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 L+ + +I ++ + VEE + E ++ + D Sbjct: 122 SGKYQKLLREHGYN-NILAKATPLFVPIVEEEIFEGPVLEATLQHYFDSL-------HPD 173 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 I+L CTH+PLI + + ++I + + + LF S Sbjct: 174 AIILGCTHFPLIQDAIADYFNNEAVLIHSGEAIVEHLQ---KELGIKARKKTPSLKLFAS 230 Query: 254 GKPDIAMRRLMQGF 267 P+ + Sbjct: 231 ENPEKLKKIAAHWL 244 >gi|119386680|ref|YP_917735.1| glutamate racemase [Paracoccus denitrificans PD1222] gi|189030363|sp|A1B945|MURI_PARDP RecName: Full=Glutamate racemase gi|119377275|gb|ABL72039.1| glutamate racemase [Paracoccus denitrificans PD1222] Length = 270 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 94/266 (35%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL VL + MP+ +Y+ D+ PYG + + + + Sbjct: 2 AVGVFDSGLGGLTVLSAIAARMPDLPLVYLGDNAHTPYGVRDADDIFDLTCAGVERLWAE 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ T+ LG + +A + G Sbjct: 62 G-CDLVILACNTASAAALKRMQETWLPKDKRVLGVFVPMIEALTERRWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + +E + E + +E Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEMG--DEILAEALVTSHVE 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + +L CTHYPL+ F++ V + +A L R Sbjct: 179 ALL--RRMPHPEAAILGCTHYPLVQAAFQKALGPQVTVYSQPNLVAESLEDYLGRHPEML 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G P+ + Q Sbjct: 237 G-AGNVSRFLTTGDPERVSGKATQFL 261 >gi|223038331|ref|ZP_03608625.1| glutamate racemase [Campylobacter rectus RM3267] gi|222880188|gb|EEF15275.1| glutamate racemase [Campylobacter rectus RM3267] Length = 519 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 10/236 (4%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 N +K L+ I FDSGIGGL VL + F+Y AD+ PYG + + Sbjct: 8 NLTLDKDLK--IAFFDSGIGGLSVLAEALGRFSGAEFLYFADEDHVPYGTKSRAEIVRLS 65 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + ++ + VIACNTA + ELRS F S+ +G PA+K AA S Sbjct: 66 LDAVGFLVS-HGAEAVVIACNTATSAAISELRSAF-SVPIIGMEPAVKLAADRFGSRPTL 123 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +++TP T+ + L+ +C I + L E+A ++ ++ ++G Sbjct: 124 LIATPLTIAGEKLARLVGRL--ECEIWSLPLPRLV----EFAQDLEFDSPAVRTYLQGEL 177 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + E R +VL CTH+ V R++ P V +D D R L + Sbjct: 178 GKFELARLGSLVLGCTHFNYFKDVLREILPPHVRIIDGIDGTLNRLVSELAARGKN 233 >gi|138896233|ref|YP_001126686.1| glutamate racemase [Geobacillus thermodenitrificans NG80-2] gi|134267746|gb|ABO67941.1| Glutamate racemase [Geobacillus thermodenitrificans NG80-2] Length = 209 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 7/203 (3%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 L +Y + VIACNTA ++ DE+R+ + LG V P + A T++G I ++ Sbjct: 1 MIHYLQQYPLKMLVIACNTATAVVLDEVRAKL-DIPVLGVVHPGARAALKATKNGHIGVI 59 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+R + S + H+ ++ VE + ++ + Sbjct: 60 GTVGTVRSKAYEKALQSINPRVHVESLACPKFVPLVESG----DFEGEKALAIVAESLAP 115 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-F 245 + DV++L CTHYPL+ + R+ V + + D AR +L + T Sbjct: 116 LRPRPIDVLILGCTHYPLLAPLIREYMGKKVKLICSGDETAREVSAILHHSHLLYTGGCE 175 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 +H F +G ++ + + FG Sbjct: 176 PEHLFFTTGSKELFEKISRKWFG 198 >gi|259502881|ref|ZP_05745783.1| glutamate racemase [Lactobacillus antri DSM 16041] gi|259169132|gb|EEW53627.1| glutamate racemase [Lactobacillus antri DSM 16041] Length = 257 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 98/251 (39%), Gaps = 10/251 (3%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSG+GGL VL+ +R +P+ ++V D FPYG +++ + + ++ ++ Sbjct: 1 MDSGLGGLSVLRVLRQELPDESLLFVGDQGHFPYGTKTQAEVRQLALAIGRFLV-RHDAK 59 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 L V+ACNTA L + +G + AA T I ++ T +T++ Sbjct: 60 LMVVACNTATGAALPAL-QAALPIPVVGVIRPGATAALATNPRTIGVIGTDSTIKNGAYE 118 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 +H + + L + VE G ++ ++ + + ++L Sbjct: 119 RTLHELQPAVKVVSQPAQPLVAIVEHGQTGTP----AAQRAVDKVLQPFASQPVENLILG 174 Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG---K 255 CTH+P + + V +D + + + +L T L+ +G Sbjct: 175 CTHFPFLSKEIQHKLGPAVRLIDPAYETVQTVKQVLAARQLAATG-GQQTVLYTTGRVAD 233 Query: 256 PDIAMRRLMQG 266 RL+ G Sbjct: 234 LQTGADRLLAG 244 >gi|83951823|ref|ZP_00960555.1| Glutamate racemase [Roseovarius nubinhibens ISM] gi|83836829|gb|EAP76126.1| Glutamate racemase [Roseovarius nubinhibens ISM] Length = 270 Score = 225 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 93/266 (34%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ +Y D+ PYG + + + Sbjct: 2 AVGIFDSGLGGLTVLSAIEKRLPDLPLVYFGDNAHAPYGVRDADDIHNLTRQHVEYLWA- 60 Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ P LG + +A G Sbjct: 61 NGCDLVILACNTASAAALRRMQEAGVPQGKRVLGVFVPLIEALTERNWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + S + +E+ + + E ++ ++ Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQSCGGVVDAIEDG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ +L CTHYPL+ F+ V +A L R + Sbjct: 179 A--LKRKMPNPQAAILGCTHYPLMEAQFQAALGEDVAVYSQPSLVADSLADYLGRRPDMR 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 +G P R Q Sbjct: 237 G-AGKATRFVTTGDPGRVSDRATQFL 261 >gi|257468491|ref|ZP_05632585.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|317062751|ref|ZP_07927236.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] gi|313688427|gb|EFS25262.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185] Length = 263 Score = 225 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 108/259 (41%), Gaps = 11/259 (4%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 ++SI IFDSGIGGL +L+K+R L+P + IY D PY ++ + Sbjct: 2 NKESSIGIFDSGIGGLTILKKIRELLPRENIIYYGDWKNNPYSEKSKEDIQNLSAKIMDF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTP 129 ++ + VI C+ D L++ + + +G + +K A ++ I+++ + Sbjct: 62 LI-RNNCKAVVIGCSIFSAASLDFLKAQYK-IPIIGMIEGGVKSAILESKQKKIAVMGSA 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ I + ++ +S L + +E+ + E+ ++ + Sbjct: 120 FTIKSNVYEKSIKEINPEITVYQISCKALCTMLEKGWENYSD-----RIEVLESYLCQIP 174 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDH 248 D ++L THYP I++ ++ +D+S A +L + + + Sbjct: 175 DTADTLILGGTHYPFILNDIKKFF--NKKIVDSSVESAIELFRILGQEDLLREGYKKGRI 232 Query: 249 ALFLSGKPDIAMRRLMQGF 267 +++G +I + F Sbjct: 233 EFYINGDKEIFKDVAEKLF 251 >gi|262199960|ref|YP_003271169.1| glutamate racemase [Haliangium ochraceum DSM 14365] gi|262083307|gb|ACY19276.1| glutamate racemase [Haliangium ochraceum DSM 14365] Length = 268 Score = 225 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 7/221 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V++ +R +P+ Y+ D PYG+ +++ + +L++ Sbjct: 8 IGVFDSGVGGLTVVRAVRAALPDRDIAYLGDTARVPYGSKSARTVERYALACQRFLLER- 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L ++ACNTA L + P A A + I ++ T AT+ Sbjct: 67 EVDLVLVACNTASATALPALAAASQVPVVGVVEPGAASAVAASTCMHIGVIGTLATVGSG 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 IH+ + V+ +L EE I ++ + F ++ D + Sbjct: 127 AYPRAIHALAPGAAVSAVACPLLVPLAEEGWVDDDIARAVARRYLARLF--EQDAEIDTL 184 Query: 196 VLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARC 232 VL CTHYPL+ V + L PV +D++ ++A AR Sbjct: 185 VLGCTHYPLLAEVLAETAAALVGHPVAIVDSASAMAEVARA 225 >gi|16127933|ref|NP_422497.1| glutamate racemase [Caulobacter crescentus CB15] gi|221236753|ref|YP_002519190.1| glutamate racemase [Caulobacter crescentus NA1000] gi|13425469|gb|AAK25665.1| glutamate racemase, putative [Caulobacter crescentus CB15] gi|220965926|gb|ACL97282.1| glutamate racemase [Caulobacter crescentus NA1000] Length = 289 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 104/276 (37%), Gaps = 26/276 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL V + + +P+ F Y+AD PYG + + + ++ Sbjct: 9 IGVFDSGVGGLSVHRALVQRLPQADFTYLADQANAPYGVRSGEDIVELTKAGCIRLFERG 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTF---------PSMAFLGAV-PAIKQAAAYTQSG---- 121 L V+ACNTA + L+ T+ + LG + P I++A Sbjct: 69 A-SLVVLACNTASAIALRRLQQTWLPDYRKDIGRPVNILGIIVPTIEKATGLPWEHEAER 127 Query: 122 ---------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 ++ + +T AT+R I + + L +E A ++I Sbjct: 128 RGEMVQALDILGVFATQATVRSRVYEIEIDKRKQDLAVFSEACPELVPLIEGDASVVEIA 187 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 + ++ ++ + G+ D +VL CTHY +I +FR P + + A Sbjct: 188 K-AVEGHVQA-LKTRIGRYPDRVVLGCTHYEIIADIFRAALPAGTPLIQQPAATAEGLAL 245 Query: 233 LLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 L R + +G P + +G Sbjct: 246 YLERHPEYDVGAGGGRVFLTTGTPGPQNGLVQSFWG 281 >gi|317404652|gb|EFV85049.1| glutamate racemase [Achromobacter xylosoxidans C54] Length = 236 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 17/234 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I ++DSG+GGL VL+ +R +P H +YVAD PYG +++R + + ++ + Sbjct: 6 PIGVYDSGVGGLSVLRAIREALPHEHLLYVADSAHVPYGEKTQQYVQQRALAIADYLVSR 65 Query: 75 YQPVLSV------IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + V LR+ P +A +G PAIK AA T+SG++ + +T Sbjct: 66 RANAMVVACNTAT-------AAAIAALRARHPDLAIIGVEPAIKPAAHLTRSGVVGVFAT 118 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + L+ + I +VE + + + Sbjct: 119 TGTLASPKFAALVQREAPEIRILFRPCPEWVLQVERGEIQGEAAARVVAAPVHELLA--- 175 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 + D +VL CTH+P + + + V L+ +ARR R L Sbjct: 176 -QGADALVLGCTHFPFLHDAIQAAAGPAVPLLETGGPVARRLRHQLQERGLLAG 228 >gi|197103587|ref|YP_002128964.1| glutamate racemase [Phenylobacterium zucineum HLK1] gi|229486245|sp|B4RCD6|MURI_PHEZH RecName: Full=Glutamate racemase gi|196477007|gb|ACG76535.1| glutamate racemase [Phenylobacterium zucineum HLK1] Length = 283 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 106/280 (37%), Gaps = 32/280 (11%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL V ++ P+ F+Y+AD PYG + + + + Sbjct: 2 AIGVFDSGVGGLTVHHRLVERFPDADFVYLADQANAPYGGRPGEEIVELTKAGCIRLFEA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF---------PSMAFLG-AVPAIKQAA--------- 115 L V+ACNTA ++ L+ T+ ++ LG VP I+ A Sbjct: 62 G-CDLVVLACNTAASVALRRLQQTWLPGYRRETGRALNVLGIVVPTIEAATGLPWEHEAE 120 Query: 116 ----AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 + ++ + STPAT R I + LA +E A Sbjct: 121 RRGEKVEKLDILGVFSTPATARSRVYEIEIDKRRQDVAVFSEPCPELARMIEAGA----- 175 Query: 172 KEDEIKKEIEGC---FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 +E+K IEG + G+ D +L CTHY ++ +FR+ P + ++ A Sbjct: 176 PREELKAVIEGHVQALRTRIGRAPDRAILGCTHYEIVADLFREALPPGTPLIRQPEATAD 235 Query: 229 RARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 L R +G+P + +G Sbjct: 236 ALARYLDRHPEFDPGRSGLRRFLTTGEPGAQNSLVETFWG 275 >gi|257459967|ref|ZP_05625071.1| glutamate racemase [Campylobacter gracilis RM3268] gi|257442408|gb|EEV17547.1| glutamate racemase [Campylobacter gracilis RM3268] Length = 400 Score = 224 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 8/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I FDSGIGGL VL + F+Y AD+ PYG + + + ++ + Sbjct: 3 IAFFDSGIGGLSVLAEALQRFSGAEFLYFADEDHVPYGTKSRAEIVRLSLDAVGFLVSRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + ELR F S+ +G PA+K AA + +++TP T+ Sbjct: 63 A-DGVVVACNTATSAAISELRGAF-SVPVIGMEPAVKLAADSFGARPTLLIATPLTISGE 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + L+ +C ++ L E+A ++ ++ + + E R + Sbjct: 121 KLARLVGRL--ECETWSLALPRLV----EFAQDLEFDSPAVRAYLSEELAKFELARLGSL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+ V R++ P V +D D R L Sbjct: 175 VLGCTHFNYFKDVLREILPPHVRIIDGIDGTLNRLASEL 213 >gi|315037664|ref|YP_004031232.1| glutamate racemase [Lactobacillus amylovorus GRL 1112] gi|312275797|gb|ADQ58437.1| glutamate racemase [Lactobacillus amylovorus GRL 1112] Length = 268 Score = 224 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 11/243 (4%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 V +K+ +P +++ D+ PYG+ + + + +L+K L + ACNTA Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRIKEEIIELVRKSVQFLLEK-NVKLIIFACNTA 76 Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRRTYTSNLIHSYVS 146 + +++ +G + + AA T++ ++++ST AT + I Sbjct: 77 TAMAMSTIQAEI-DPQIIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIRFRDP 135 Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 + + +++ LA VE + K ++ +GK D +++ CTHYPLI Sbjct: 136 EIQVTELAAPKLAPLVEAQK-----DHETNLKVVKESLTPLQGKDFDTLIMGCTHYPLIQ 190 Query: 207 HVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLM 264 F++ V LD +D +A+ ++ R H + +G P + L Sbjct: 191 KEFKEAINDKNVTILDPADQVAQYTFNVMRRDGLFSDGNEKVSHEYYTTGDP-TSFDHLA 249 Query: 265 QGF 267 + F Sbjct: 250 RTF 252 >gi|332528172|ref|ZP_08404203.1| aspartate and glutamate racemase:glutamate racemase [Rubrivivax benzoatilyticus JA2] gi|332112743|gb|EGJ12536.1| aspartate and glutamate racemase:glutamate racemase [Rubrivivax benzoatilyticus JA2] Length = 247 Score = 224 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 7/240 (2%) Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88 L+ +R +P F+YVAD PYG+ L R + + + L V+ACNT Sbjct: 2 LRALRARLPAERFVYVADSGHAPYGDRPRPYLLGRAGAVAGFFVAQRAKAL-VLACNTIS 60 Query: 89 TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148 + + LR+ ++ + PAIK A A T+SG++ +L+T AT+ L + + Sbjct: 61 VVAAETLRAHH-ALPIVAMEPAIKPAVAATRSGIVLVLATTATVHSPAVERLCRIWGREV 119 Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208 I L L +E+ + + + +E D++VL CTHY + Sbjct: 120 EILLQPCPGLVELIEQG----RFADPATRTLLERYLRPALDAGADMVVLGCTHYAFVQDE 175 Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 R+L+ V ++ SD++AR+ L + SG P+ A+RR ++ G Sbjct: 176 IRRLAGAAVQVIEPSDAVARQLVHRLGPALAPAGAAGASTCYYSSGDPE-ALRRFLELMG 234 >gi|307292858|ref|ZP_07572704.1| glutamate racemase [Sphingobium chlorophenolicum L-1] gi|306880924|gb|EFN12140.1| glutamate racemase [Sphingobium chlorophenolicum L-1] Length = 267 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 80/251 (31%), Positives = 123/251 (49%), Gaps = 2/251 (0%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +L FDSG+GGL +L + +P+ +Y AD GFPYG + + R+ L +++ Sbjct: 7 APLLFFDSGVGGLSILAPAQAALPQAPVVYAADSAGFPYGTRSEADIAARVPALLGRLVE 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +Y+P L+VIACNTA T+ +R+ + +G VPAIK AA +QS + +L T AT+R Sbjct: 67 RYRPRLAVIACNTASTIALSAVRAAL-DIPVVGTVPAIKPAALLSQSRVFGVLGTDATVR 125 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + Y L Y S C + S L E G + + + G + G R D Sbjct: 126 QPYVDRLAAEYGSDCTVLRHGSAALVQLAEAKLRGEPLDPAIARDALAGLLDQPGGDRMD 185 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++VLACTH+PL+ SP P+ ++ + IARR L + + A+F Sbjct: 186 IVVLACTHFPLVEAELAAASPRPLRFVHGGEGIARRI-AYLTQGQPWPSEPLPGTAVFTR 244 Query: 254 GKPDIAMRRLM 264 + RL Sbjct: 245 LDESVEQLRLA 255 >gi|154249839|ref|YP_001410664.1| glutamate racemase [Fervidobacterium nodosum Rt17-B1] gi|154153775|gb|ABS61007.1| glutamate racemase [Fervidobacterium nodosum Rt17-B1] Length = 276 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 22/256 (8%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSGIGGL VL+K+ +P H+IYVAD + PYG ++ + +++K Sbjct: 2 NIGLFDSGIGGLSVLKKLIETLP-AHYIYVADTMRAPYGTKSSETIETFSREIIGFLMEK 60 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + ACNT+ + + R+ F + + + A A+ Y ++++ T T++ Sbjct: 61 KVERIF-AACNTSDST-LSKYRNNFR-IPYHSIIQAGVSASKYE---RVAVIGTHTTVQS 114 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 N + + + + S VEE + E +K +E + D Sbjct: 115 GIYKNALE--AKGKKVMQRPAQLFVSLVEEGIFYGNMVEAVVKFYLE----PFRKFKPDE 168 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTH+P + + ++ V +D +D + R L R F +++ Sbjct: 169 LILGCTHFPFLKDIIMRVMG-NVRVIDPADELVREVSHL-----VLNGRPF--VEFYVTS 220 Query: 255 KPDIAMRRLMQGFGLK 270 PD R++ + G + Sbjct: 221 NPDEFERKIKK-IGFR 235 >gi|84503079|ref|ZP_01001175.1| Glutamate racemase [Oceanicola batsensis HTCC2597] gi|84388623|gb|EAQ01495.1| Glutamate racemase [Oceanicola batsensis HTCC2597] Length = 270 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 19/266 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + + D Sbjct: 2 AVGIFDSGLGGLTVLDAVTKRLPDVPFVYFGDNAHAPYGVRDADDIYDLTTRAVARMFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L V+ACNTA ++ ++ LG + +A Q G Sbjct: 62 G-CDLVVLACNTAAAAALRRMQESWVPADKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + + + +EE + + E ++ ++ Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 ++++ R + +L CTHYPL+ VF+ V ++ +A L R Sbjct: 179 A--LKRKMPRPEAAILGCTHYPLMDEVFQAALGPEVAVYSQANLVAASLADYLGRRPEFI 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267 + +G P R Q Sbjct: 237 GPGTESL-FLTTGDPARVSSRATQFL 261 >gi|283953730|ref|ZP_06371261.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 414] gi|283794771|gb|EFC33509.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 414] Length = 247 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 15/245 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ VL+ + IY D PYG + + K + + ++ Sbjct: 3 IGVFDSGVGGISVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFKQF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132 Q + +IACNTA D LRS G + A ++ T ++ I +++T AT+ Sbjct: 62 QIDMLIIACNTASAYALDALRSKA-HFPIYGVIDAGVKSTIKTLPDKNKEILVIATKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + S +I+ +++ + VEE + ++ + + Sbjct: 121 KSEEYQKRLLS-QGYTNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITVP------ 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D ++LACTH+PL+ + + + D+I + R N + Sbjct: 174 DALILACTHFPLLGCSLSKYFGDKTKLIHSGDAIVEFLK---ERENISSKNYKAKLHFYA 230 Query: 253 SGKPD 257 S + Sbjct: 231 SSDVE 235 >gi|114771082|ref|ZP_01448522.1| Glutamate racemase [alpha proteobacterium HTCC2255] gi|114548364|gb|EAU51250.1| Glutamate racemase [alpha proteobacterium HTCC2255] Length = 269 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 99/274 (36%), Gaps = 24/274 (8%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I IFDSG+GGL V Q++ +P+ +Y+ D+ PYG + + + + Sbjct: 2 PIGIFDSGLGGLTVQQEIASRIPDQSLVYLGDNKYAPYGVRDHEQIYSLTQNAIERLWNA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA + ++ + + LG + +A Q G Sbjct: 62 G-CDLVIVACNTASAVAVKRMQEEWLPENKRVLGVFVPLIEAVTERQWGDNSAPKEVGVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TPAT+ + + L +EE ++ E ++ + Sbjct: 121 QVALFATPATVATRAFQRELAFRAIGVDVEAQPCGGLVDAIEEN--DFELAEALVQSHVS 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + VL CTHYP++ F + V +A L R + Sbjct: 179 ALL--RRMPNPQAAVLGCTHYPILKKCFEKALGPNVQVYSQGRIVAESLMHYLNRH--PR 234 Query: 242 TRVFDDHALFLSGKPD----IAMRRLMQGFGLKS 271 + + +G D A R L + KS Sbjct: 235 FKEKGEALFLTTGDVDKVSLAATRFLSKKMLFKS 268 >gi|71908727|ref|YP_286314.1| glutamate racemase [Dechloromonas aromatica RCB] gi|71848348|gb|AAZ47844.1| glutamate racemase [Dechloromonas aromatica RCB] Length = 269 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 7/256 (2%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 I +FDSG+GGL VL+ +R +P+ F Y AD PYG+ + L++R + + + Sbjct: 11 NQPIAVFDSGLGGLTVLRALRDRLPQEDFFYFADTRFLPYGDRPEVFLRERGVLIAKALA 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + L + T E + + P +K A A T+SG+I +L+T TL Sbjct: 71 KQGAKALVIAC--NTATAAAAEAIRAAIDLPVVALEPGVKPAVALTRSGVIGVLATTRTL 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 L+ ++ + + + LA +E ++ ++ Sbjct: 129 ASERFQRLVGNHANHLRVIAQACPGLAEAIEAQGP----DSPQVAALLDAFVTPLAAADA 184 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV+VL CTHYP + + P LD + +AR+ LL + + Sbjct: 185 DVVVLGCTHYPWVAGAIARRMPVGTSLLDTGEPVARQLERLLAASHLLGGG-HGRLTVAT 243 Query: 253 SGKPDIAMRRLMQGFG 268 SG P + + +G Sbjct: 244 SGAPAAVSATVERLWG 259 >gi|167648830|ref|YP_001686493.1| glutamate racemase [Caulobacter sp. K31] gi|189030358|sp|B0T549|MURI_CAUSK RecName: Full=Glutamate racemase gi|167351260|gb|ABZ73995.1| Glutamate racemase [Caulobacter sp. K31] Length = 283 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 62/277 (22%), Positives = 100/277 (36%), Gaps = 26/277 (9%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI +FDSG+GGL V + + +P+ FIY+AD PYG + + D Sbjct: 2 SIGVFDSGVGGLTVHRALVNRLPQADFIYLADQANAPYGGRPGEEIVALTRAGCERLFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF---------PSMAFLGAV-PAIKQAA--------- 115 L V+ACNTA + L+ T+ + LG + P I+ A Sbjct: 62 GA-SLVVLACNTASAIALRRLQQTWLPGYRKALGRPINVLGIIVPTIEAATGLPWEHEAE 120 Query: 116 ----AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 Q ++ + STP T I + LA +E A +++ Sbjct: 121 RRGEKVEQLDILGVFSTPGTAASRVYEIEIDKRRQDVAVFSEPCPNLARMIEAGAGAVEL 180 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 E+++ ++ + G+ D +L CTHY +I +FR P + S A Sbjct: 181 AT-EVERHVQQ-LKTRIGRYPDRAILGCTHYEIIADLFRAALPAGTPLIHQPASTADALE 238 Query: 232 CLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 R +G P + +G Sbjct: 239 LYFQRHPELDPGTGGGRVFLTTGTPGPQNALVETFWG 275 >gi|294340641|emb|CAZ89033.1| putative Glutamate racemase [Thiomonas sp. 3As] Length = 263 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 19/244 (7%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL+ +R +P+ IYVAD PYG+ D L++R + ++ + Sbjct: 8 GVFDSGVGGLTVLRALRAQLPQVSLIYVADSAHAPYGDRPDDFLQQRARQITRFLIGQGA 67 Query: 77 PVLSVIACNTAFTLIKDELRSTFP-----SMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ V + + F+G P IK A A + + + +L+TP+T Sbjct: 68 RLIVV-------ACNTATAAAITALRAEFDLPFVGIEPGIKPALARSDARRVGVLATPST 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 LR L+H++ + L LA VE ++ ++++ I Sbjct: 121 LRSAKFRALLHTHAAAAEPVLQPCPGLADAVERG----DLQAPQVQQLIRQFCAPLRTAG 176 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D +VL CTHYPL+ + V LD ++ +AR+A L + + + + ++ Sbjct: 177 CDTVVLGCTHYPLLAEQIQAELGPQVHLLDTAEPVARQAARLWQQTSAQRPELP---QIY 233 Query: 252 LSGK 255 +G Sbjct: 234 TNGD 237 >gi|313888088|ref|ZP_07821762.1| glutamate racemase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845778|gb|EFR33165.1| glutamate racemase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 276 Score = 222 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 8/250 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 N I +DSG+GGL VL+ + +F++ D + PYG + +K M + Sbjct: 3 NNVIGFYDSGVGGLSVLKVALNKIKNKNFVFFGDTLRMPYGARTNEEIKNYTMEVMGFF- 61 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + LS+IACNTA + E + P + A T++ +++++T + + Sbjct: 62 EDLDVDLSIIACNTATSHGLKESNERYKYPIIGVVEPGSENALERTKTKRVALVATKSCV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 ++ S + V L +E + + +KK ++ E Sbjct: 122 ESGVYDKVLKSMDPSIELRSVYCPDLTLAIERGEFEEEYMDGIVKKYLDY----FEDYDF 177 Query: 193 DVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 D ++L CTHYPL+ F+++ V +D + A +L +Q Sbjct: 178 DTMILGCTHYPLVEDSFKRILKKQGKKVLMVDPAYKTVLDAMNILKIEKDNQEIPNRTID 237 Query: 250 LFLSGKPDIA 259 +++G ++ Sbjct: 238 FYITGDINLF 247 >gi|254431905|ref|ZP_05045608.1| glutamate racemase [Cyanobium sp. PCC 7001] gi|197626358|gb|EDY38917.1| glutamate racemase [Cyanobium sp. PCC 7001] Length = 274 Score = 222 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 100/261 (38%), Gaps = 18/261 (6%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL+K+ L P +Y+ D PYG ++ + + + Sbjct: 6 GLFDSGLGGLTVLRKVNQLYPHSPCLYLGDTARVPYGTRSPDEIRAIAAEVVRWLRWQGV 65 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 VL +ACNT+ L D + + LG + ++ + S + +L+TPAT R Sbjct: 66 GVLL-MACNTSNALALDVAVAEA-GVPVLGLIDSVASVIS---SDRVGVLATPATARSGA 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 IH+ + V +E E+++ D +V Sbjct: 121 YRRAIHASRPDALVIEVGCPEFVPLIEAGHR----FSPELRRAALAYIAPLLAAAVDTVV 176 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---------PRINTHQTRVFDD 247 L CTHYPL+ + +L P V +D +++ A R LL R Sbjct: 177 LGCTHYPLLRPLLTELLPAGVVLVDPAEAAAERLGPLLGSLGEAPEVERQGESVVPAVQR 236 Query: 248 HALFLSGKPDIAMRRLMQGFG 268 L ++G PD G Sbjct: 237 SRLCVTGCPDSFATGAEDWLG 257 >gi|322434927|ref|YP_004217139.1| glutamate racemase [Acidobacterium sp. MP5ACTX9] gi|321162654|gb|ADW68359.1| glutamate racemase [Acidobacterium sp. MP5ACTX9] Length = 271 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 13/259 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +I +FDSG GGL VL+ + L+P ++Y+ D PYG + + + + +L+ Sbjct: 9 PTIGVFDSGFGGLTVLRALLPLIPGARYLYLGDTARLPYGAKSQQTIARYALSSAAFLLE 68 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132 + + V+ACNTA L D+L+ P + +G + P AA+ + +L+T AT+ Sbjct: 69 QG-IEMLVVACNTATALALDDLKQALP-IPVVGVIAPGTAAAASANADTNVLVLATTATV 126 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + + + + +L VEE + + ++ + E Sbjct: 127 QSGAYTRACTAL--GLTAYEKACPLLVPLVEEGWIDHPVTAEVLRIYLTEALEE--APNA 182 Query: 193 DVIVLACTHYPLIVHVFRQ---LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 ++L CTHYPL+ + + P+ +D++ + A I Sbjct: 183 TTLLLGCTHYPLLRPMIERTLTALNHPLKIIDSATA---TAHAAAALIPASAQSAHATCT 239 Query: 250 LFLSGKPDIAMRRLMQGFG 268 + + + R G Sbjct: 240 FYATDSIEKFQRLGTSFLG 258 >gi|114327536|ref|YP_744693.1| glutamate racemase [Granulibacter bethesdensis CGDNIH1] gi|122327492|sp|Q0BTT2|MURI_GRABC RecName: Full=Glutamate racemase gi|114315710|gb|ABI61770.1| glutamate racemase [Granulibacter bethesdensis CGDNIH1] Length = 276 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 89/270 (32%), Positives = 132/270 (48%), Gaps = 12/270 (4%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +K IL+FDSGIGGL V +R ++P YVAD GFPYG D AL R++ + Sbjct: 1 MRKTDAHILVFDSGIGGLGVADCIRRMLPAATLGYVADTAGFPYGAMSDEALVTRVLTVL 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + + +P + VIACNTA TL LRS + F+G VP +K AA+ + + I +L+T Sbjct: 61 EQAIARLRPDMVVIACNTASTLALSALRSRH-DLPFIGCVPPLKWAASVSATRQIGLLAT 119 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 PAT+ R Y + L+ + C +H + LA E G + + ++ E+ G Sbjct: 120 PATVDRPYLTALMQEHGQGCTLHAHGARHLAGYAEAVFRGETVLVEAVRAEL-GILGMI- 177 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D + L CTHY ++ RQ P PV WLD ++++AR+A + Sbjct: 178 -PDIDAVALGCTHYGRLLPWLRQAMPRPVAWLDPAEAVARQAARIAITAAATAAPDSLPR 236 Query: 249 A-------LFLSGK-PDIAMRRLMQGFGLK 270 A +F +G PD A R+ G Sbjct: 237 AAPCWAQTVFTTGAVPDEATRQAWAAEGFP 266 >gi|221195778|ref|ZP_03568831.1| glutamate racemase [Atopobium rimae ATCC 49626] gi|221184252|gb|EEE16646.1| glutamate racemase [Atopobium rimae ATCC 49626] Length = 284 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 7/230 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSGIGG+ VL+++ +P FI+ D PYG+ ++ + +D+ Sbjct: 26 VGVFDSGIGGISVLKRLVTELPYERFIFYGDSAHAPYGSKTPQQVQALSGAITDTFVDEG 85 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNTA LR +P + +G PA+K AA G I +++T TL + Sbjct: 86 A-KAIVIACNTATAAAAQMLRERYPQLPIVGVEPALKPAALAHSQGRIIVMATARTLSLS 144 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L + + I ++ + +E D ++K I D + Sbjct: 145 KFLRLEAQWGATSQIIPIAGTGIVELIEAGKANSPQMHDLLEKLIGQY-----RGTVDAV 199 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 VL CTHYP I R + VD+ D A++ LL + Sbjct: 200 VLGCTHYPFITSQIRAVLG-NVDFYDGGTGAAQQLHRLLKTEDLLAQEPA 248 >gi|242310721|ref|ZP_04809876.1| glutamate racemase [Helicobacter pullorum MIT 98-5489] gi|239523119|gb|EEQ62985.1| glutamate racemase [Helicobacter pullorum MIT 98-5489] Length = 253 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 96/248 (38%), Gaps = 14/248 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ VL+ + IY D PYG + + + + Sbjct: 4 KKIGVFDSGVGGISVLKSLIDSDSFEEIIYYGDTARVPYGVRSKETIIQYSLEAL-EFFK 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPA 130 ++ L V+ACNT D ++ F + +G + A ++ I IL T A Sbjct: 63 QFNLDLLVVACNTISAYALDSMQ-KFANYPIVGVIEPGVLALTNNLDNKNANILILGTKA 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ NL+H+ +I+ +++ + VEE +I E +K + + + Sbjct: 122 TINSNLYQNLLHT-QGYTNINGLATSLFVPIVEEGIFEGEILESTMK-----YYFKDYKE 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D I+L CTH+PLI + + ++I + + + Sbjct: 176 SPDAIILGCTHFPLIAKAIANYYQNKPILIHSGNAIMEYLK---QQYTFQSIKHKTKITF 232 Query: 251 FLSGKPDI 258 + S D Sbjct: 233 YASDSLDK 240 >gi|27904976|ref|NP_778102.1| glutamate racemase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29839498|sp|P59574|MURI_BUCBP RecName: Full=Glutamate racemase gi|27904374|gb|AAO27207.1| glutamate racemase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 263 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 126/262 (48%), Gaps = 9/262 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 L+N I+IFDS +GGL + ++++ P ++IYV D+ FPYG ++ + KR + + S Sbjct: 2 NLKNYIIIFDSSLGGLSIYKQIKKKFPYMNYIYVCDNKNFPYGEKDEIFILKRSIKIIST 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 I K +L ++ACNT L++ F + +G +P + +A T++ +I +L T Sbjct: 62 ITKKITTILVILACNTITVTSLTTLKNFF-NFPIIGVIPNLNKARKITKNNIIGLLGTKI 120 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ Y N I +V + I L+++ L E+ I IK +E K+ Sbjct: 121 TIHHYYIQNHISLFVPKYKIKLLANNTLVKIAEQKIKNQLISTKNIKFILEPLL--KKHN 178 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 D ++L CTH+ + +++ P + +D+ I + +L R + +++ Sbjct: 179 MPDTLILGCTHFSFLKEEIKKIFPKKIQIIDSKVHIPKNISTILAR----NLKTTNNNIA 234 Query: 251 FLSGK--PDIAMRRLMQGFGLK 270 F S K + L++ + K Sbjct: 235 FFSKKIITTKTIHYLLKKYNFK 256 >gi|34496658|ref|NP_900873.1| glutamate racemase [Chromobacterium violaceum ATCC 12472] gi|34102513|gb|AAQ58878.1| glutamate racemase [Chromobacterium violaceum ATCC 12472] Length = 256 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 16/256 (6%) Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77 ++DSG+GGL V + +R +P++ Y+AD PYG + R + + ++ + Sbjct: 1 MYDSGLGGLSVWRAVRAALPDWPITYLADQAYCPYGPRSREEIIARALKVGHYLVSQGAT 60 Query: 78 VLSVIACNTAFTLIKDELRSTFP-----SMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +L V + S+ +G PAIK AAA +++G I++L+T TL Sbjct: 61 LLVV-------ACNTATTAAIAALRAELSLPIVGIEPAIKPAAAMSRTGRIAVLATEYTL 113 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 L+ + + + +VE + ++K +E + Sbjct: 114 ASERVKTLLDDHAGDVDVLRRAGHGWVEQVEAGELSSERTRALVRKVVE----PLIDENI 169 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I L CTHYP + + R+++ + D +++IARR LL R + Sbjct: 170 DHIALGCTHYPFLAPLIREVTGDGIQLYDPAEAIARRVCDLLRRHGCDSQGDRYYRFITT 229 Query: 253 SGKPDIAMRRLMQGFG 268 S RL Q G Sbjct: 230 SDDAGEMALRLPQLIG 245 >gi|238917207|ref|YP_002930724.1| glutamate racemase [Eubacterium eligens ATCC 27750] gi|259509814|sp|C4Z114|MURI_EUBE2 RecName: Full=Glutamate racemase gi|238872567|gb|ACR72277.1| glutamate racemase [Eubacterium eligens ATCC 27750] Length = 265 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 8/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL VL + MPE +I+ AD PYG ++K + ++DK Sbjct: 3 IGIFDSGIGGLSVLHQAMITMPEADYIFYADVDNVPYGEKTREEVRKLVDHAVGFLVDKG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133 V+ACNTA + LR + + +G PA+K A +T + ++STP T + Sbjct: 63 -CQAIVLACNTATSAAISYLREKYK-LPIIGIEPAVKPAVEHTSETGRRVMVVSTPVTAK 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 LI Y + + +V+ L +A ++ ++ F Sbjct: 121 GEKLKRLIDKYDDKHVVDVVALPKLV----RFAQDDDFDSSDVTDYLKCEFAPYNLNDYS 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 +VL CTH+ F +L P ++ +D + ++ + Sbjct: 177 ELVLGCTHFNYFKDSFAKLFPDDLEMVDGNTGVSNNLKN 215 >gi|329891275|ref|ZP_08269618.1| glutamate racemase [Brevundimonas diminuta ATCC 11568] gi|328846576|gb|EGF96140.1| glutamate racemase [Brevundimonas diminuta ATCC 11568] Length = 287 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 99/281 (35%), Gaps = 30/281 (10%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL V +++ P FIY+ D PYG + + + + Sbjct: 2 AIGVFDSGVGGLTVHRELTTRFPTRDFIYLGDQAHAPYGGRSGEDIVELTRAGCERLFEA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP---------SMAFLGAV-PAIKQAAAYT------ 118 + V+ACNTA + L+ T+ + LG + P I+ A Sbjct: 62 GA-SVVVLACNTASAIALRRLQQTWIPGMREKLGRPVNVLGIIVPTIEAATGLPWSFEAE 120 Query: 119 --------QSGLI---SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167 + I + T AT I + + LA +E A Sbjct: 121 RESRMEGEKKQAIDITGVFCTAATAMSRVYEIEIDKRRDDLAVFTEACPGLAGLIELGAP 180 Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 ++K + ++ + G+ D +L CTHY ++ +F Q P V + ++A Sbjct: 181 PEELKV-VVDDHVDA-LRRRIGRHPDKAILGCTHYEIVADLFAQALPPGVQVISQPAAVA 238 Query: 228 RRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 R + +G P + Q +G Sbjct: 239 DSLERYFDRHPEYDLGSSARRDFLTTGTPGPQSDLVAQFWG 279 >gi|89054829|ref|YP_510280.1| glutamate racemase [Jannaschia sp. CCS1] gi|122498526|sp|Q28PV7|MURI_JANSC RecName: Full=Glutamate racemase gi|88864378|gb|ABD55255.1| glutamate racemase [Jannaschia sp. CCS1] Length = 270 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 94/263 (35%), Gaps = 20/263 (7%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL VL + +P+ IY+ D+ PYG E + + D+ Sbjct: 2 AVGIFDSGLGGLTVLDAVTKALPDVPLIYMGDNAHTPYGVREADDIYDLTTAGVQHLFDR 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ + LG + +A Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQEGWVPEGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++ +TP T+ + + + +E+ + + E ++ ++ Sbjct: 121 EVALFATPTTVSSRAFQRELAFRAIGVDVEAQPCGGVVDAIEDG--DMILAEALVRSHVD 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 +++ +L CTHYPL+ VFR V +A L R Sbjct: 179 A--LKRRMPNPQAAILGCTHYPLVEDVFRAALGDGVAVFSQPSLVADSLGDYLKRRPEML 236 Query: 242 TRVFDDHALFLSGKPDIAMRRLM 264 A +G P + Sbjct: 237 GSGEP--AFLTTGDPKSVEAKAT 257 >gi|297622727|ref|YP_003704161.1| glutamate racemase [Truepera radiovictrix DSM 17093] gi|297163907|gb|ADI13618.1| glutamate racemase [Truepera radiovictrix DSM 17093] Length = 270 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 13/250 (5%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + +FDSG+GGL VL +R L+P HF+YV D PYG+ ++ + Sbjct: 1 MKTPPHAPLGVFDSGVGGLTVLAALRALLPAEHFLYVGDTARVPYGSKPLEMVRAFAAEI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 + +L + V+ACNTA L + P + G + P ++ A G I +L Sbjct: 61 CALLLSRGVKG-IVVACNTASAAALPGLAAELP-VPVWGVIAPGVQAALRRAPGGRIGVL 118 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+R + + C + + VEE + + I + + ++ Sbjct: 119 GTAGTIRTGAYQRPLE--AAGCRVWARPCPLFVPIVEEG-----VSDTVIARLVAEHYL- 170 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 K+ D +L CTHYP + + ++ P LD+++ AR L + Sbjct: 171 KDAPALDAAILGCTHYPALKGILSEVLP-GTALLDSAEETARVVAHDLALLGLANPNAAP 229 Query: 247 DH-ALFLSGK 255 ++G Sbjct: 230 GTVRHLVTGD 239 >gi|255321691|ref|ZP_05362846.1| glutamate racemase [Campylobacter showae RM3277] gi|255301171|gb|EET80433.1| glutamate racemase [Campylobacter showae RM3277] Length = 327 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 10/232 (4%) Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 N +K L+ I FDSGIGGL VL + F+Y AD+ PYG + + Sbjct: 8 NLTLDKDLK--IAFFDSGIGGLSVLAEALRRFSGAEFLYFADEDHVPYGTKSRAEIVRLS 65 Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + ++ + V+ACNTA + ELR F S+ +G PA+K AA + Sbjct: 66 LDAVGFLVSRGA-DGVVVACNTATSAAISELRGAF-SVPVIGMEPAVKLAADSFGARPTL 123 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +++TP T+ + L+ +C + L E+A ++ ++ + Sbjct: 124 LIATPLTIAGEKLARLVGRL--ECETWSLPLPRLV----EFAQDLEFDSPAVRAYLREEL 177 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 + E +R +VL CTH+ V R++ P V +D D R L Sbjct: 178 AKFELERLGSLVLGCTHFNYFKDVLREILPSHVRIIDGIDGTLNRLASELGE 229 >gi|227514545|ref|ZP_03944594.1| glutamate racemase [Lactobacillus fermentum ATCC 14931] gi|227087102|gb|EEI22414.1| glutamate racemase [Lactobacillus fermentum ATCC 14931] Length = 268 Score = 220 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 16/258 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V++ ++ +P I+V D FPYG + +++ Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGTKDQAEVRQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + + +L K+ + V+ACNTA L++ P + +G + P + A A + G Sbjct: 53 LALSIGAFLL-KHDVKMMVVACNTATAAALPALQAVLP-IPVIGVIEPGARAALAQDKKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T AT I + ++ + VE G ++ + +++ Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIVEHGQTGTAKAQEVVSEQLM 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + +++ CTH+P + + V +D + A+ L + Sbjct: 171 T----FKEHPVKTLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226 Query: 242 TRVFDDHALFLSGK-PDI 258 ++ L+ +G PD+ Sbjct: 227 NHAHPNYHLYSTGNLPDL 244 >gi|311087439|gb|ADP67519.1| glutamate racemase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087930|gb|ADP68009.1| glutamate racemase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 262 Score = 220 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 5/227 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 + VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T +I+ Y I ++ + LA E+ G+ + + ++K D I+ Sbjct: 121 TQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWI--NLPTCPDTII 178 Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241 L CTH+ L+ + + V ++D+ + + + L N +Q Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSYLKTSNVNQ 225 >gi|148239373|ref|YP_001224760.1| glutamate racemase [Synechococcus sp. WH 7803] gi|147847912|emb|CAK23463.1| Glutamate racemase [Synechococcus sp. WH 7803] Length = 268 Score = 220 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 16/257 (6%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 FDSG+GGL VL+++ IY+ D PYG+ ++ + + + D+ Q Sbjct: 6 GFFDSGLGGLTVLRRVLESHGGVPTIYLGDTARVPYGSRSPSEIRAIASEVVAWLRDQ-Q 64 Query: 77 PVLSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNT L +D E ++ P + +G AAA + + +L+TPAT+ Sbjct: 65 VTTVVMACNTTNALARDVTEGQAGVPVVGLIG------AAAAMVRDSRVGVLATPATVAS 118 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I + + + +E G D ++ Sbjct: 119 GAYRESIEALHPGTLVVQQACPDFVPLIEAGDLGC----DALRSAAIHYLQPLLEASVQS 174 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALF 251 IVL CTHYPL++ + L P + +D + +A + LL + Q + + Sbjct: 175 IVLGCTHYPLLLPLLSNLLPESIRLIDPALGVASQLDALLGKPVPGGLDQPLALEATRIC 234 Query: 252 LSGKPDIAMRRLMQGFG 268 ++ P R G Sbjct: 235 VTSDPQGFADRSTPWLG 251 >gi|297568262|ref|YP_003689606.1| glutamate racemase [Desulfurivibrio alkaliphilus AHT2] gi|296924177|gb|ADH84987.1| glutamate racemase [Desulfurivibrio alkaliphilus AHT2] Length = 267 Score = 220 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 5/195 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG+ V + + +P+Y +Y D PYG+ + + +L + Sbjct: 2 IGVFDSGVGGMTVARAIEQALPDYRLVYFGDLARTPYGSKSSDTISRYSCQNVDFLLSRG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + V+ACN+A ++ LR+ + F PA+ QAA ++ G + ++ T AT+R Sbjct: 62 A-KIIVVACNSAASVAAANLRAAYDLPIFEVIGPAVAQAARFSSRGRVGVIGTRATIRSG 120 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L+ + C + + +L VEE + + E K + + ++ D + Sbjct: 121 VYEQLLQQQNAGCRVFSAACPLLVPLVEEGW----LDKRETKMILRRYLAPLKQQQVDTL 176 Query: 196 VLACTHYPLIVHVFR 210 VL CTHYPL+ + + Sbjct: 177 VLGCTHYPLLKELIQ 191 >gi|262341174|ref|YP_003284029.1| glutamate racemase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272511|gb|ACY40419.1| glutamate racemase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 269 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 15/260 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I IFDSGIGGL++ ++++ MP IY D PYG + + M + S + Sbjct: 7 SPIGIFDSGIGGLLIAKEIKIQMPNEDLIYFGDTRNMPYGEKSKEFIIENSMKIASFLYK 66 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K L VIACN+ + D L TF + + I + S I I++TPAT+ Sbjct: 67 KKCKAL-VIACNSITSNALDILCKTFHRKILIFNVIDPIVKHKILLSSKRIGIIATPATI 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + + I Y I +S+ +LA +E+ G KIK++ I + K Sbjct: 126 RSNFYTKEIKKYYHHLDIVQISTSLLAPMIEK---GFKIKKNIINNYLNRL------KSI 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL-- 250 D ++LACTHY + V +D + + + L + Sbjct: 177 DTLLLACTHYLFLKQEIDNFYHGKVRLIDIQKIVVQEIKKTLNDDKLLCNHPTWNRKFPI 236 Query: 251 FLSGK--PDIAMRRLMQGFG 268 F + P +++ FG Sbjct: 237 FYTSSLIPTFFEKQVRILFG 256 >gi|219681899|ref|YP_002468285.1| glutamate racemase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471604|ref|ZP_05635603.1| glutamate racemase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254766110|sp|B8D9X6|MURI_BUCA5 RecName: Full=Glutamate racemase gi|219624742|gb|ACL30897.1| glutamate racemase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 262 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 5/227 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 + VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T I+ Y I ++ + LA E+ G+ + + ++K D I+ Sbjct: 121 TQKTIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWI--NLPTCPDTII 178 Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241 L CTH+ L+ + + V ++D+ + + + L N +Q Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSYLKTSNVNQ 225 >gi|87124213|ref|ZP_01080062.1| Glutamate racemase [Synechococcus sp. RS9917] gi|86167785|gb|EAQ69043.1| Glutamate racemase [Synechococcus sp. RS9917] Length = 262 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 99/255 (38%), Gaps = 12/255 (4%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL+ + +Y+ D PYG+ ++ + + L Q Sbjct: 6 GLFDSGVGGLTVLRSVLHRHGPVPCVYLGDTARVPYGSRAPSEIRSIAAEVVA-WLRSQQ 64 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNT L ++ + +G + A AAA + + +L+TPAT+ Sbjct: 65 VSTVVMACNTTNALA-RDVAEGQAGVPVVGLIGA---AAALVRESRVGVLATPATVASGA 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 I + + + R+E + +++ + ++ Sbjct: 121 YRESIEALHPGSLVVQQACPEFVPRIEAG----DLSSPALRQIAQLYLTPLLEASVQSVI 176 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFLS 253 L CTHYPL+ + + L P V +D ++ +AR+ LL Q L ++ Sbjct: 177 LGCTHYPLLQPLLQSLLPPDVRLIDPAEGVARQLDALLGTPREGRPDQPLSLATTRLCVT 236 Query: 254 GKPDIAMRRLMQGFG 268 P+ R G Sbjct: 237 ADPEGFACRATPWLG 251 >gi|325474017|gb|EGC77205.1| glutamate racemase [Treponema denticola F0402] Length = 271 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 8/250 (3%) Query: 18 IF-DSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +F DSGIGGL L+ ++ L P+ YVAD FPYG + + L I++K + Sbjct: 10 VFIDSGIGGLPYLRHLKELEPQSSCAYVADTKHFPYGEKTLEEVIEYTEDLVKKIIEKLK 69 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 P + +IACNT LR F + F+G VPAIK AA +++ I++L+T T+ Y Sbjct: 70 PSVIIIACNTMTVSALSHLRKKF-EIPFVGTVPAIKPAALTSKNKKIAVLATERTVNDIY 128 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 NLI + + C + + +L S++E E++ K I + TD V Sbjct: 129 VQNLIEEFGADCKFFMRADSVLVSKIENTLLSG--SEEDKKAGIRPAVEFFKSAGTDTAV 186 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA----LFL 252 L CTH+ + F+ + +D+ D + +A + P + ++ Sbjct: 187 LGCTHFLHLRDEFKSECEPDIKIVDSLDGVVNQALKISPPQKSKTDEKLNNIQKDIFYIT 246 Query: 253 SGKPDIAMRR 262 S K + + ++ Sbjct: 247 SEKTEESEKK 256 >gi|212697494|ref|ZP_03305622.1| hypothetical protein ANHYDRO_02064 [Anaerococcus hydrogenalis DSM 7454] gi|212675493|gb|EEB35100.1| hypothetical protein ANHYDRO_02064 [Anaerococcus hydrogenalis DSM 7454] Length = 249 Score = 219 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 9/216 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL VL+++ + ++ Y+ D+ PYGN + + K + ++ K Sbjct: 3 NIGVFDSGLGGLTVLRELSKKH-KANYFYLGDNKNVPYGNRSNEEIIKLSKDIVRFLIKK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 VIACNT + ELR F IK+A ++G + +++T AT + Sbjct: 62 -DIDFFVIACNTISVVAIKELRKEFDKKFISITDEGIKEA--LNRNGDVFVMATKATCKN 118 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +I S+ ++ S L +EE + ++I +++ K+ + Sbjct: 119 HAYKKIIEGRSSK-KVYEKSCPKLVDYIEEGI----LSGEKIDSQLKDYLTLANEKKIEN 173 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 I+L CTHYP+I + + + +D + +AR Sbjct: 174 IILGCTHYPIIKKTIEKNLTYKANIIDPAKVLARDI 209 >gi|325847040|ref|ZP_08169866.1| glutamate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481012|gb|EGC84057.1| glutamate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 248 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 9/216 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL VL+++ + ++ Y+ D+ PYGN + + K + ++ K Sbjct: 3 NIGVFDSGLGGLTVLRELSKKH-KANYFYLGDNKNVPYGNKSNEEIIKLSKDIVKFLIKK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 VIACNT + ELR F IK+A ++G + +++T AT + Sbjct: 62 -DIDFFVIACNTISVVAIKELREEFDKKFISITDEGIKEA--LNKNGDVFVMATKATCKN 118 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +I S+ ++ S L +EE + ++I +++ K+ + Sbjct: 119 HAYKKIIEGRSSK-KVYEESCPKLVDYIEEGI----LSGEKIDSQLKDYLTIANEKKIEN 173 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 I+L CTHYP+I + + + +D + +AR Sbjct: 174 IILGCTHYPIIKKTIEKNLTYKANIIDPAKVLARDI 209 >gi|307637232|gb|ADN79682.1| glutamate racemase [Helicobacter pylori 908] gi|325995823|gb|ADZ51228.1| Glutamate racemase [Helicobacter pylori 2018] gi|325997417|gb|ADZ49625.1| Glutamate racemase [Helicobacter pylori 2017] Length = 255 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI P P + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|282852140|ref|ZP_06261497.1| glutamate racemase [Lactobacillus gasseri 224-1] gi|282556704|gb|EFB62309.1| glutamate racemase [Lactobacillus gasseri 224-1] Length = 241 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 80/232 (34%), Gaps = 7/232 (3%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 MP I++ D PYG+ + + +L K + + CNTA + + Sbjct: 1 MPNESTIFIGDQANMPYGDRSKEEIISLTRDSVNFLLSK-DVKIIIFGCNTATAVAMSTI 59 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 + P AA T++ ++++ T AT+ I + + + Sbjct: 60 KKEIPLQIIGVVQSGALAAARTTETKNVAVIGTKATVNSHSYLKEIQYRDPKIQVSEFAQ 119 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 LA EE E+ + + + D +VL CTHYPL+ + Sbjct: 120 PKLAPLAEE-----DPAEEIKQAVVSESLAPLKKADYDTLVLGCTHYPLLRKEIVAVVGQ 174 Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLMQG 266 +D +D +A+ +L R D H + +G+ Q Sbjct: 175 DRKIVDPADQVAQYTYNVLRRDGLFAAGNSDTKHEYYTTGEAKKFTEITRQW 226 >gi|28210023|ref|NP_780967.1| glutamate racemase [Clostridium tetani E88] gi|28202458|gb|AAO34904.1| glutamate racemase [Clostridium tetani E88] Length = 266 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 107/247 (43%), Gaps = 11/247 (4%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSG+GGL +++++ L+P + Y D+ PYGN + + + ++ Sbjct: 11 DSVIGVLDSGVGGLTTVKELQELLPNENIYYFGDNKNVPYGNKTQEEIIQFTRNMIEFLV 70 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V++V ACNT T+ D++ + P + + + +++T T+ Sbjct: 71 SQNVKVIAV-ACNTISTI-IDKISGDYDVKIIKVIDPIVNNIKNIQKKHKVGLIATSFTI 128 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y ++ + S LA+ V+ K +D IK IE K + Sbjct: 129 STKYYDEML----GDVKVIGKGSPELAAIVDSGEINEKEVKDIIKVHIEDI---KSRENV 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251 D I+L CTHYP+I H F + P +++L+ + + L +N + + +F Sbjct: 182 DTIILGCTHYPIIKHFFDECYP-DINFLNPAHQHVIAVKEYLEEMNLLREDNNNKFFKIF 240 Query: 252 LSGKPDI 258 +G + Sbjct: 241 TTGDKEK 247 >gi|315499265|ref|YP_004088069.1| glutamate racemase [Asticcacaulis excentricus CB 48] gi|315417277|gb|ADU13918.1| Glutamate racemase [Asticcacaulis excentricus CB 48] Length = 284 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 104/277 (37%), Gaps = 26/277 (9%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL + + + MP FIY+ D PYG + + + + Sbjct: 3 AIGVFDSGVGGLSIHRALVDRMPGADFIYLGDQKHAPYGERSGEEIVELTRQGCETLFNA 62 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF---------PSMAFLGAV-PAIKQA---------- 114 + V+ CNTA + L+ST+ + LG + P I+ A Sbjct: 63 GA-SIVVLGCNTASAVALRRLQSTWLADYRKSIGRPVNVLGIIVPTIEAATGLPWEHEAE 121 Query: 115 ---AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 A ++ I T AT R I + + LA+ +E K+ Sbjct: 122 RRGAKIENVDVLGIFCTTATARSRVYEIEIDKRRQDLAVFTEPCIGLAAMIEAGESEEKL 181 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 ++ ++ + G+ D +L CTHY +I +F+ P + S+A Sbjct: 182 T-AVVESRVQA-LKTRIGRYPDRAILGCTHYEIIGELFKAALPEGTPLIHQPSSVANALE 239 Query: 232 CLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 + R + +HA +G P + + +G Sbjct: 240 SYIARHPEYAIGTSANHAFLTTGVPGLQSEIVAAFWG 276 >gi|320537123|ref|ZP_08037095.1| glutamate racemase [Treponema phagedenis F0421] gi|320145996|gb|EFW37640.1| glutamate racemase [Treponema phagedenis F0421] Length = 267 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 6/242 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 DSG GGL LQ + L P+ +YVAD+ FPYG + + ++ ++ Sbjct: 11 AFIDSGTGGLPYLQYLHELEPDASMVYVADNAHFPYGKKTKEEVIAFASEMVEKLIARFN 70 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 P + ++ACNT + D LR F ++ F+G VP IK A +++ I IL+T T+ Y Sbjct: 71 PEIIIVACNTMSVMALDSLRKKF-TLPFVGTVPGIKLAVKQSRNKRIGILATERTVCDPY 129 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T LI + S C+ + L +++E+ I +E K I+ + + TD I+ Sbjct: 130 TERLIEEFGSGCYFEKRADQELIAQIEDGL--ITASYEEKLKAIQPALEQFKKANTDSII 187 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 LACTH+ I VF + + +D + +A + P + ++ + + Sbjct: 188 LACTHFLHIEDVFESAAGSDMQIIDTRSGVIHQALRIAP---CKKNPDAPPNSCYATAAL 244 Query: 257 DI 258 D Sbjct: 245 DT 246 >gi|42526956|ref|NP_972054.1| glutamate racemase, putative [Treponema denticola ATCC 35405] gi|41817271|gb|AAS11965.1| glutamate racemase, putative [Treponema denticola ATCC 35405] Length = 271 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 8/250 (3%) Query: 18 IF-DSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +F DSGIGGL L+ ++ L P+ YVAD FPYG + + L I++K + Sbjct: 10 VFIDSGIGGLPYLRHLKELEPQSSCAYVADTKHFPYGEKTLEDVIEYTEDLVKKIIEKLK 69 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 P + +IACNT LR F + F+G VPAIK AA +++ I++L+T T+ Y Sbjct: 70 PSVIIIACNTMTVSALSHLRKKF-EIPFVGTVPAIKPAALTSKNKKIAVLATERTVNDIY 128 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 NLI + + C + + +L S++E E++ K I + TD V Sbjct: 129 VQNLIEEFGADCKFFMRADSVLVSKIENTLLSG--SEEDKKAGIRPAVEFFKSAGTDTAV 186 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA----LFL 252 L CTH+ + F+ + +D+ D + +A + P + + Sbjct: 187 LGCTHFLHLRDEFKSECEPDIKIVDSLDGVVNQALKISPPQKSKTDEKLKNIQKDIFYIT 246 Query: 253 SGKPDIAMRR 262 S K + + ++ Sbjct: 247 SEKTEESTKK 256 >gi|219682454|ref|YP_002468838.1| glutamate racemase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254766111|sp|B8D878|MURI_BUCAT RecName: Full=Glutamate racemase gi|219622187|gb|ACL30343.1| glutamate racemase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086275|gb|ADP66357.1| glutamate racemase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 262 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 5/227 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 + VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T +I+ Y I ++ + LA E+ G+ + + ++K D I+ Sbjct: 121 TQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWI--NLPTCPDTII 178 Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241 L CTH+ L+ + + V ++D+ + + + L N +Q Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSCLKTSNVNQ 225 >gi|184155007|ref|YP_001843347.1| glutamate racemase [Lactobacillus fermentum IFO 3956] gi|417584|sp|Q03469|MURI_LACFE RecName: Full=Glutamate racemase gi|229486241|sp|B2GB35|MURI_LACF3 RecName: Full=Glutamate racemase gi|149549|gb|AAA25241.1| glutamate racemase [Lactobacillus fermentum] gi|183226351|dbj|BAG26867.1| glutamate racemase [Lactobacillus fermentum IFO 3956] Length = 268 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 107/258 (41%), Gaps = 16/258 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V++ ++ +P I+V D FPYG + +++ Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGTKDQAEVRQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + + +L K+ + V+ACNTA T + +G + P + A A + G Sbjct: 53 LALSIGAFLL-KHDVKMMVVACNTA-TAAALPALQAALPIPVIGVIEPGARAALAQDKKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T AT I + ++ + VE G ++ + +++ Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIVEHGQTGTAKAQEVVSEQLM 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + +++ CTH+P + + V +D + A+ L + Sbjct: 171 T----FKEHPVKTLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226 Query: 242 TRVFDDHALFLSGK-PDI 258 ++ L+ +G PD+ Sbjct: 227 NHAHPNYHLYSTGNLPDL 244 >gi|78777751|ref|YP_394066.1| glutamate racemase [Sulfurimonas denitrificans DSM 1251] gi|78498291|gb|ABB44831.1| glutamate racemase [Sulfurimonas denitrificans DSM 1251] Length = 247 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 15/257 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSGIGGL V++ + IY D PYG + + + + + + Sbjct: 3 VGVFDSGIGGLTVVKSLLENKLFEEIIYFGDTARVPYGIKDKSTIIRYAIEAV-EFFKNF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132 + L ++ACNT E+R S +G V A A A ++ I IL T AT+ Sbjct: 62 ELDLIIVACNTVSAHALSEMREA-SSCPVIGVVEAGILATANALKDKNSNILILGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +++ ++ ++ + VEE +I + +K + ++ Sbjct: 121 NSKAYEIGLNAE-GFKNLQAKATGLFVPIVEEEIYSGEILDATMKHYFKEI------QKP 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTH+PLI + + + D+I R + F Sbjct: 174 DAIILGCTHFPLISDALQSYFSKESILIHSGDAIVEYLE---KRFEFSKKYKETKLEFFA 230 Query: 253 SGKPDIAMRRLMQGFGL 269 S P+ + + Sbjct: 231 SESPEALKNISKKWLNI 247 >gi|33861174|ref|NP_892735.1| putative aspartate and glutamate racemase:glutamate racemase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639906|emb|CAE19076.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 264 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 11/258 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I IFDSGIGG +L + + Y+AD PYGN ++ + + Sbjct: 1 MKLKIGIFDSGIGGFTILSALMKTREDIEVFYLADTKRVPYGNKNIEQIRFIAKDICNWF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 DK VL IACNT D L + + I + I +L+TPAT Sbjct: 61 KDKNLDVLL-IACNTTNACALDILENNLQ----IPCFDLINSVSEIVTKKYIGVLATPAT 115 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +Y +I S + + +E+ + +++ + + Sbjct: 116 IKTSYYKKIIESKRENVQVFQQACPEFVPEIEK----TNLDLNKLNYLSDLYINPLLKEN 171 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249 + I+L C+HYPLI +V + + +D S ++ L+P+ ++++ D+ Sbjct: 172 IEEIILGCSHYPLIYNVLKSKVHSNIRIIDPSAALVNNFNNSFLIPKNYSYESTSSDNIK 231 Query: 250 LFLSGKPDIAMRRLMQGF 267 F++ + +++ Sbjct: 232 FFVTQNSEDFSKKVKYWL 249 >gi|113954148|ref|YP_730755.1| glutamate racemase [Synechococcus sp. CC9311] gi|113881499|gb|ABI46457.1| glutamate racemase [Synechococcus sp. CC9311] Length = 263 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 103/257 (40%), Gaps = 16/257 (6%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSGIGGL VL+++ Y+ D PYG+ ++ + + L Q Sbjct: 6 GLFDSGIGGLTVLRRILERHGAVPVTYLGDTARVPYGSRSPSEIRSIAAEVVA-WLRAQQ 64 Query: 77 PVLSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNT L +D E ++ P + +G AAA + + +L+TPAT+ Sbjct: 65 VSTVVMACNTTNALARDVTEGQAGVPVVGLIG------AAAALVKESRVGVLATPATVAS 118 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I + + + +E ++ DE+++ D Sbjct: 119 GAYRESIEALHPGTLVVQQACPDFVPLIEAG----DLRSDELREAAIRYLQPLLEASVDS 174 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALF 251 +VL CTHYPL+V + L P + +D + ++A + L + + +Q + L Sbjct: 175 VVLGCTHYPLLVPLLANLLPSHMRLIDPAVAVATQLDAFLGQPLPGSQNQPVSLEAAHLC 234 Query: 252 LSGKPDIAMRRLMQGFG 268 ++ R G Sbjct: 235 VTKDAQGFAERATAWLG 251 >gi|226326749|ref|ZP_03802267.1| hypothetical protein PROPEN_00609 [Proteus penneri ATCC 35198] gi|225204586|gb|EEG86940.1| hypothetical protein PROPEN_00609 [Proteus penneri ATCC 35198] Length = 206 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 3/200 (1%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K+ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+T AT+ Sbjct: 3 EKHFLAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLATRATV 62 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R YT LI + + C +H + S L E G ++ D ++K + KE Sbjct: 63 KRPYTHELIERFATDCKVHSLGSAELVELAERKLHGEEVSLDALRKILTPWLKMKEP--P 120 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTH+PL+ + P +D+ +IARR L+ + A L Sbjct: 121 DTVVLGCTHFPLLADELLSVLPDGTRIIDSGAAIARRTAWLVVNQAKIKGSNEISFAYCL 180 Query: 253 S-GKPDIAMRRLMQGFGLKS 271 + ++ ++ GFG +S Sbjct: 181 KEDENSELLKPVLAGFGFES 200 >gi|127663966|gb|ABO28671.1| glutamate recemase [Helicobacter pylori] Length = 255 Score = 217 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI P P + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYSLRENACTFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWVEKQAKEWL 253 >gi|329847625|ref|ZP_08262653.1| asp/Glu/Hydantoin racemase family protein [Asticcacaulis biprosthecum C19] gi|328842688|gb|EGF92257.1| asp/Glu/Hydantoin racemase family protein [Asticcacaulis biprosthecum C19] Length = 284 Score = 217 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 106/277 (38%), Gaps = 26/277 (9%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL + + +P+ FIY+AD PYG+ + + + + Sbjct: 2 AMGVFDSGVGGLSIHHALVNRLPQADFIYLADQKHTPYGDRSGEEIVELTRQGCETLFEA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPS---------MAFLGAV-PAIKQAA--------- 115 L V+ACNTA + L+ T+ S + LG + P I+ A Sbjct: 62 GA-SLVVLACNTASAVALRRLQQTWLSGFRKTYKRPVNVLGIIVPTIEAATGLPWEHEAE 120 Query: 116 ----AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 + ++ + +T AT R I + + LA +E+ A Sbjct: 121 RRGEKIEKLDIVGVFATVATARSRVYEIEIDKRRQDIAVFTEACSGLADMIEKGA-DRDS 179 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 +IK +E + G+ D +L CTHY L+ +FRQ P + S+A+ Sbjct: 180 LSAKIKGHVES-LRIRVGRYPDRAILGCTHYELVADLFRQHLPAGTPIIHQPPSVAKAMG 238 Query: 232 CLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 + R + +G P + +G Sbjct: 239 DYVERHTKYDIGSSGARTFLTTGTPGSQSALIEAFWG 275 >gi|311086850|gb|ADP66931.1| glutamate racemase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 262 Score = 217 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 5/227 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 + VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T +I+ Y I ++ + LA E+ G+ + + ++K D I+ Sbjct: 121 TQKIIYEYSYSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWI--NLPTCPDTII 178 Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241 L CTH+ L+ + + V ++D+ + + + L N +Q Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSCLKTSNVNQ 225 >gi|330718035|ref|ZP_08312635.1| glutamate racemase [Leuconostoc fallax KCTC 3537] Length = 238 Score = 217 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 8/226 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I +FDSG+GG+ L+ + ++P FI+ D + PYG+ + + +L Sbjct: 4 KQPIGVFDSGVGGISTLRVLTQMLPNEDFIFFGDSLHAPYGSKTAGQVVDLSQKVVDTLL 63 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + VIACNTA + K L +P++ +G PA+K+A I +L T TL Sbjct: 64 AQ-NVKAIVIACNTATSSAKPWLVDHYPNVPIIGIEPALKEAVDDGHQD-ILVLGTALTL 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + Y HI ++ LA +E+ + +IK + F + + + Sbjct: 122 SLPKFQTQLDQYQENHHITVLPCPGLADLIEQGDKRLT----DIKALLIDLFKDIQNRSF 177 Query: 193 DVIVLACTHYPLIVHVFRQLSP--WPVDWLDNSDSIARRARCLLPR 236 +VL CTHYP I + + + + I R+ L + Sbjct: 178 SAVVLGCTHYPFIQPLIETYLAQKNNIKFYTGYEGIGRQLIRTLEQ 223 >gi|127663934|gb|ABO28649.1| glutamate recemase [Helicobacter pylori] Length = 255 Score = 217 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI P P + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALRKNACTFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|260663402|ref|ZP_05864293.1| glutamate racemase [Lactobacillus fermentum 28-3-CHN] gi|260552254|gb|EEX25306.1| glutamate racemase [Lactobacillus fermentum 28-3-CHN] Length = 268 Score = 217 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 107/258 (41%), Gaps = 16/258 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I + DSG+GGL V++ ++ +P I+V D FPYG + +++ Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGTKDQAEVRQ 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + + +L K+ + V+ACNTA T + +G + P + A A + G Sbjct: 53 LALSIGAFLL-KHDVKMMVVACNTA-TAAALPALQAALPIPVIGVIEPGARAALAQDKKG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T AT I + ++ + VE + + + ++ + Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIVEHG----QTETAKAQEVVS 166 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + + +++ CTH+P + + V +D + A+ L + Sbjct: 167 EQLMTFKEHPVKTLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226 Query: 242 TRVFDDHALFLSGK-PDI 258 ++ L+ +G PD+ Sbjct: 227 NHAHPNYHLYSTGNLPDL 244 >gi|217032399|ref|ZP_03437894.1| hypothetical protein HPB128_25g47 [Helicobacter pylori B128] gi|298736238|ref|YP_003728764.1| glutamate racemase [Helicobacter pylori B8] gi|216945966|gb|EEC24582.1| hypothetical protein HPB128_25g47 [Helicobacter pylori B128] gi|298355428|emb|CBI66300.1| glutamate racemase [Helicobacter pylori B8] Length = 255 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMDHFALSTPPLLIHSGDAIVEYLQQ--KYTLKKNAHAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|210134751|ref|YP_002301190.1| glutamate racemase [Helicobacter pylori P12] gi|226707586|sp|B6JLD2|MURI_HELP2 RecName: Full=Glutamate racemase gi|210132719|gb|ACJ07710.1| glutamate racemase [Helicobacter pylori P12] Length = 255 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI P P + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVGYLQQ--KYALKKNAHAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|88808406|ref|ZP_01123916.1| Glutamate racemase [Synechococcus sp. WH 7805] gi|88787394|gb|EAR18551.1| Glutamate racemase [Synechococcus sp. WH 7805] Length = 268 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 99/255 (38%), Gaps = 12/255 (4%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL+++ IY+ D PYG+ ++ + + L + Sbjct: 6 GLFDSGLGGLTVLRRVLERHGAVPTIYLGDTARVPYGSRSPSEIRVIASEVVA-WLRHQK 64 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 V+ACNT L +D + +G + A AAA + + +L+TPAT+ Sbjct: 65 VTTVVMACNTTNALARDVAEGKA-GVPVVGLIGA---AAAMVRESRVGVLATPATVASGA 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 + I + + + +E + DE+ + IV Sbjct: 121 YRDSIEALHPGTLVVQQACPDFVPLIEAG----DLNCDELYRAAIRYLQPLLEASVQSIV 176 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALFLS 253 L CTHYPL++ + L P + +D + +A + LL + Q ++++ Sbjct: 177 LGCTHYPLLLPLLSNLLPESIRLIDPALGVASQLDVLLGQPLPGGLDQPLALGATHIYVT 236 Query: 254 GKPDIAMRRLMQGFG 268 P R G Sbjct: 237 SDPQGFADRATPWLG 251 >gi|166030602|ref|ZP_02233431.1| hypothetical protein DORFOR_00268 [Dorea formicigenerans ATCC 27755] gi|166029604|gb|EDR48361.1| hypothetical protein DORFOR_00268 [Dorea formicigenerans ATCC 27755] Length = 272 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 115/253 (45%), Gaps = 19/253 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL + ++PE F+Y AD+ PYG ++ + + + ++ K Sbjct: 3 IGIFDSGMGGLSVLHRALRMIPEADFLYYADEEHVPYGEKTREQVRGYIDEIIAFMIKK- 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATLR 133 Q VIACNTA ++ E RS FP + +G PA+K+A + G I + +TP T++ Sbjct: 62 QVDAIVIACNTATSVATKEYRSQFP-LPIVGMEPAVKKAVEEYADRPGRILVAATPITIQ 120 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 +L+ + + LV+ L E+ +D++ ++ + + Sbjct: 121 GDKLHHLVDRVDKRDMVDLVALPKLVRFAEQ----EIFDQDQVVPYLKEALKDYPLEEYK 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-----------INTHQT 242 VL CTH+ ++++ P ++++D ++ R + + + + Sbjct: 177 AFVLGCTHFNYFKESYQEIFPNKIEFVDGNEGALRELIRRMEKECDTISVKNGANDAEEF 236 Query: 243 RVFDDHALFLSGK 255 D + SGK Sbjct: 237 SKTDRVTYYFSGK 249 >gi|127663884|gb|ABO28624.1| glutamate recemase [Helicobacter pylori 908] Length = 255 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI P P + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--NYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|308184333|ref|YP_003928466.1| glutamate racemase [Helicobacter pylori SJM180] gi|308060253|gb|ADO02149.1| glutamate racemase [Helicobacter pylori SJM180] Length = 255 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI P P + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|15617147|ref|NP_240360.1| glutamate racemase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11386924|sp|P57619|MURI_BUCAI RecName: Full=Glutamate racemase gi|25291667|pir||F84994 glutamate racemase (EC 5.1.1.3) [imported] - Buchnera sp. (strain APS) gi|10039212|dbj|BAB13246.1| glutamate racemase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 262 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 5/227 (2%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 + VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y Sbjct: 62 INVVVIACNTISTVALSILRKKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T +I+ Y I ++ + LA E+ G+ + + ++K D I+ Sbjct: 121 TQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWI--NLPTCPDTII 178 Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241 L CTH+ L+ + + V ++D+ + + L N +Q Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIESYLKTSNVNQ 225 >gi|78779002|ref|YP_397114.1| glutamate racemase [Prochlorococcus marinus str. MIT 9312] gi|78712501|gb|ABB49678.1| glutamate racemase [Prochlorococcus marinus str. MIT 9312] Length = 264 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 11/261 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I IFDSGIGG +L + + Y+AD P+G+ ++ + + Sbjct: 1 MKLKIGIFDSGIGGFTILNSLLKTRNDVEVFYLADTKRIPFGDKNFEEIRLIAKEICNFF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 DK L IACNT D L + + I + +I IL+T T Sbjct: 61 EDKNLDALL-IACNTTNACALDILENDLK----IPCFDLINSVSEIVNKQIIGILATKTT 115 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R +Y N I S I S +E K+ ++ + K Sbjct: 116 VRSSYYKNAISSKKENSKIFQNECPEFVSEIER----EKLDFIKLNNLSDLYLKPLLNKN 171 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249 + I+L C+HYPLI R+ + +D S+++ ++ +P+ + +++ F++ Sbjct: 172 IEEIILGCSHYPLIYEFLRKKISSNIKIIDPSEALIKKFNESFAIPKTDRYESLSFENVK 231 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F++ + D +++ G+ Sbjct: 232 FFVTSERDKFSKKVKFWLGIN 252 >gi|295698712|ref|YP_003603367.1| glutamate racemase [Candidatus Riesia pediculicola USDA] gi|291157340|gb|ADD79785.1| glutamate racemase [Candidatus Riesia pediculicola USDA] Length = 270 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 8/248 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 ILI DSG+GGL V + + +P + YV D+ FPYGN ++ + KR++ L Sbjct: 5 NFSQKILILDSGLGGLSVYKYLVRKLPNLSYTYVFDNEFFPYGNRKESFIIKRVIRLIDQ 64 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 I + + ++ACNT + + L+ F LG+VP I A +T++ +I +L+T Sbjct: 65 IQRDREFEIIILACNTVSVVSINILKDIFSDYIILGSVPEIDVAIQFTKNKVIYVLATKR 124 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ Y N + Y + IHLVSS L +EE G I +++I ++ + Sbjct: 125 TI--EYIRNKVSFYSKEFKIHLVSSSKLVRMIEEKIRGKIILKNKIYSILKNL---SNHQ 179 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDD 247 D IVL CTHY I ++ P ++ +D+ +I + + + + + ++ Sbjct: 180 IPDTIVLGCTHYSFISKEIKEAFPKCINLIDSKKNIYDDLTNYVDKRSKKKEYYDKYHEN 239 Query: 248 HALFLSGK 255 F Sbjct: 240 MVFFTKSD 247 >gi|118475058|ref|YP_891779.1| glutamate racemase [Campylobacter fetus subsp. fetus 82-40] gi|166231031|sp|A0RNJ6|MURI_CAMFF RecName: Full=Glutamate racemase gi|118414284|gb|ABK82704.1| glutamate racemase [Campylobacter fetus subsp. fetus 82-40] Length = 253 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 8/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL +L + FIY AD+ PYG + + + L Sbjct: 3 IAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSKDEIIRLCLNCV-QFLTNL 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA + ELRS+F S+ +G PA+K G I +++TPAT+ Sbjct: 62 SVDMIVIACNTATSAAITELRSSF-SVPIIGMEPAVK--LGVNAGGDILVVATPATISGN 118 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 S+LIH + HL++ L E+A ++ E+ K ++ + + ++ Sbjct: 119 KLSDLIHKVNLESKTHLLALPKLV----EFAQNMEFDSLEVLKYLKDEISKFDLSNISLL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+ FR + P +D + + L Sbjct: 175 VLGCTHFNYFKDSFRAILPNKTGIIDGVNGTINQMIRRL 213 >gi|123968208|ref|YP_001009066.1| putative aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. AS9601] gi|123198318|gb|ABM69959.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. AS9601] Length = 264 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 11/254 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGG +L + + Y+AD PYGN ++ + + +DK Sbjct: 5 IGIFDSGIGGFTILNSLLKTRKDVKVFYLADTKRIPYGNKNSKEIRLIAKEICTFFVDKN 64 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 L V ACNT D L F I + +I +L+T T+R + Sbjct: 65 LDALLV-ACNTTNACALDILEDNLKVPCF----DLINSVSEIVDKQIIGVLATQRTVRSS 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 Y I++ I S +E+ K+ D++ + K + + Sbjct: 120 YYKKAINAKKGNTIIFQQECPEFVSEIEK----EKLNLDKLNSLSDLYLRPLINKNIEEL 175 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHALFLS 253 +L C+HYPLI FR+ + +D S ++ ++ + + ++++ +++ F++ Sbjct: 176 ILGCSHYPLIYDFFRKKLDSNIKIIDPSVALIKKFNESFAISKTTSYESLFYENVDFFVT 235 Query: 254 GKPDIAMRRLMQGF 267 + D ++++ F Sbjct: 236 SEKDKFLKKVKFWF 249 >gi|261886270|ref|ZP_06010309.1| glutamate racemase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 242 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 8/219 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL +L + FIY AD+ PYG + + + L Sbjct: 3 IAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSKDEIIRLCLNCV-QFLTNL 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + VIACNTA + ELRS+F S+ +G PA+K G I +++TPAT+ Sbjct: 62 SVDMIVIACNTATSAAITELRSSF-SVPIIGMEPAVK--LGVNAGGDILVVATPATISGN 118 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 S+LIH + HL++ L E+A ++ E+ K ++ + + ++ Sbjct: 119 KLSDLIHKVNLESKTHLLALPKLV----EFAQNMEFDSLEVLKYLKDEISKFDLSNISLL 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 VL CTH+ FR + P +D + + L Sbjct: 175 VLGCTHFNYFKDSFRAILPNKTGIIDGVNGTINQMIRRL 213 >gi|213029822|ref|ZP_03344269.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 208 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 4/205 (1%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+ Sbjct: 1 MTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLA 59 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT++R YT LI + ++C I ++ S L E G + +E+++ + Sbjct: 60 TRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMP 119 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 E D +VL CTH+PL+ Q+ P +D+ +IARR LL + Sbjct: 120 EP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDAN 177 Query: 248 HALFLSGKPD-IAMRRLMQGFGLKS 271 A ++ P + ++Q +G ++ Sbjct: 178 IAYCMAMTPGAEQLLPVLQRYGFET 202 >gi|317179086|dbj|BAJ56874.1| glutamate racemase [Helicobacter pylori F30] Length = 255 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R N + ++ +++ + +EE I E E+ + + Sbjct: 121 RSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|46091551|dbj|BAD13991.1| HP0549 [Helicobacter pylori] Length = 255 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + +Y D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIVYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYTLKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|208434471|ref|YP_002266137.1| glutamate racemase [Helicobacter pylori G27] gi|226707587|sp|B5Z6S2|MURI_HELPG RecName: Full=Glutamate racemase gi|208432400|gb|ACI27271.1| glutamate racemase [Helicobacter pylori G27] Length = 255 Score = 215 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKEKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|217033496|ref|ZP_03438925.1| hypothetical protein HP9810_905g15 [Helicobacter pylori 98-10] gi|216944021|gb|EEC23452.1| hypothetical protein HP9810_905g15 [Helicobacter pylori 98-10] Length = 255 Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R N + ++ +++ + +EE I E E+ + + Sbjct: 121 RSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 175 EVVILGCTHFPLIAHQIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACTFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|257095297|ref|YP_003168938.1| glutamate racemase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047821|gb|ACV37009.1| glutamate racemase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 261 Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 24/261 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL + +P +Y+AD PYG+ +D ++ R++ + ++D+ Sbjct: 2 IGVFDSGLGGLSVLAAIARALPRADLVYLADTAHVPYGDKDDAFIRSRVLRIGRHLVDQG 61 Query: 76 QPVLSVIACNTAFTLIKDEL-------RSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 V+ R +FP + +G P +K AAA ++SG I++L+T Sbjct: 62 CGVIV--------VACNTATAAAVAAFRESFPMLPVVGVEPGVKPAAAASRSGRIAVLAT 113 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 +T R + LI + + + A+RVE +++++ + +E Sbjct: 114 ASTARSQRLAQLIRQHAGSVRVDVEPCPGWATRVES----LRLEDPDFVEEARQHLAPLL 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 D IVL CTHY + + +D +D++AR+ L R Sbjct: 170 AAGVDQIVLGCTHYAFLCPTLEPIVAQRASLVDVADAVARQCVRL----AGASARGRGQL 225 Query: 249 ALFLSGKPDIAMRRLMQGFGL 269 L + +P+ + + GL Sbjct: 226 RLLATAQPER-LDAALPALGL 245 >gi|317181866|dbj|BAJ59650.1| glutamate racemase [Helicobacter pylori F57] Length = 255 Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +++ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIRQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMKHFTLSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|91070144|gb|ABE11066.1| putative aspartate and glutamate racemases:glutamate racemase [uncultured Prochlorococcus marinus clone HF10-11A3] Length = 264 Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 15/260 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I IFDSGIGG +L + + Y+AD P+G+ ++ + + Sbjct: 1 MKLKIGIFDSGIGGFTILNSLLKTRKDVEVFYLADTKRIPFGSKNFKEIRLIAKEICNFF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 DK L V ACNT D L P + +V I +I +L+T Sbjct: 61 ADKNLDALLV-ACNTTNACALDILEDNLKIPCFDLINSVSGIVD------KKIIGVLATQ 113 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+R +Y I+S I S +E+ K+ ++ + Sbjct: 114 ATVRSSYYKKAINSKKENTKIFQQECPEFVSEIEK----EKLNLHKLNYLSDLYLRPLIN 169 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDD 247 K + ++L C+HYPLI R+ + +D S ++ ++ + + +++ +++ Sbjct: 170 KNIEELILGCSHYPLIYDFLRKKLDSNIKIIDPSVALVKKFNESFAIQKTYCYESLSYEN 229 Query: 248 HALFLSGKPDIAMRRLMQGF 267 F++ + D+ +++ F Sbjct: 230 VEFFVTSEKDVFFKKVKFWF 249 >gi|15645174|ref|NP_207344.1| glutamate racemase [Helicobacter pylori 26695] gi|2492984|sp|P56068|MURI_HELPY RecName: Full=Glutamate racemase gi|2313665|gb|AAD07615.1| glutamate racemase (glr) [Helicobacter pylori 26695] Length = 255 Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI + + D+I + F Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--NYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|21672799|ref|NP_660866.1| glutamate racemase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008820|sp|Q8K924|MURI_BUCAP RecName: Full=Glutamate racemase gi|21623448|gb|AAM68077.1| glutamate racemase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 256 Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 63/217 (29%), Positives = 114/217 (52%), Gaps = 3/217 (1%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 LI DSGIGGL +L ++ P ++IY+ D+ FPYG ++ L +R + + + I Y Sbjct: 2 LIIDSGIGGLSILDNIKKKFPHINYIYMLDNEAFPYGKKKEKFLIERSIKIINAIKKIYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 + +IACNTA T+ L+ TF S+ +G +P K A T++ +I +++T +T+ Y Sbjct: 62 IKMVIIACNTASTISLPTLKKTF-SIPIIGVLPVFKPAIKITKNKIIGLIATRSTINSLY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 I+ Y + I ++++ LA E+ + I ++KK + I + D I+ Sbjct: 121 IKKTIYKYSLENTIKIIATNELAVIAEKKVRKLSISNIKLKKIFQSWII--LSIKPDTII 178 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 L CTH+ + +Q+ P++++D D+I + Sbjct: 179 LGCTHFSFLKKEIQQIFHKPINFIDPGDTIVNKIEKY 215 >gi|34557207|ref|NP_907022.1| glutamate racemase [Wolinella succinogenes DSM 1740] gi|34482923|emb|CAE09922.1| GLUTAMATE RACEMASE [Wolinella succinogenes] Length = 248 Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 97/255 (38%), Gaps = 15/255 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSGIGGL V++ + IY D PYG + + + + + L ++ Sbjct: 3 VGVFDSGIGGLSVVKSLLDSHAFEEIIYFGDTARVPYGVKDSETIIRYSLEALA-FLREF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132 + ++ACNTA + LR + +G + A ++ I ++ T AT Sbjct: 62 DIDMLIVACNTASAHALEALRQAA-DVDVIGVIEPGVLALENRLPDKNSPILVIGTKATT 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 L+ + HI +++ +L VEE + E ++ ++ + Sbjct: 121 ASGQYPALLKEHGY-THIQSLATGLLVPLVEEGIFHGSLLESALEHYFSSLAVKPK---- 175 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 I+L CTH+PLI + + ++I + + QT + F Sbjct: 176 -AIILGCTHFPLIAKAISAYFNHEPLLIHSGEAIMQHLKERYELDYFPQTHI----QYFA 230 Query: 253 SGKPDIAMRRLMQGF 267 S P + + Sbjct: 231 SENPLALEKVAKEWL 245 >gi|317010769|gb|ADU84516.1| glutamate racemase [Helicobacter pylori SouthAfrica7] Length = 255 Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 99/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPATIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQHVKNKNTPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFAPLKIVP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS-----PWPVD-WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI P + + D+I + F Sbjct: 175 EVVILGCTHFPLIAQKIESYFMEHFIPSKTPLLIHSGDAIVEYLQQ--KYALKKNAYAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|317009473|gb|ADU80053.1| glutamate racemase [Helicobacter pylori India7] Length = 255 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 97/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI + + D+I + T F Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNTCAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|169335598|ref|ZP_02862791.1| hypothetical protein ANASTE_02013 [Anaerofustis stercorihominis DSM 17244] gi|169258336|gb|EDS72302.1| hypothetical protein ANASTE_02013 [Anaerofustis stercorihominis DSM 17244] Length = 269 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 I I DSG+GGL V ++ L+P + IY+ D PYGN + + + S Sbjct: 2 NKNQPIGILDSGVGGLTVFKQTERLLPNENIIYLGDTKRMPYGNKSEEEIIILANKMISY 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL--GAVPAIKQAAAYTQSGLISILST 128 L++ ++ACNT + ++L S P + + G+ A K+ ++ T LI +++T Sbjct: 62 -LEEQDVKAVLLACNTISSH-IEKLTSKVPIFSIVKAGSELATKK-SSETNVDLIGLIAT 118 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + IH +I S L ++ + IK+ IE + Sbjct: 119 KATVNSGSYNKEIHKLNKDINIISNDSTRLPKVIDSQIENKPLLNQLIKECIEPII--DK 176 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 K ++L C+H+P+I + + LD ++ + R L + + Sbjct: 177 EKNVKNLILGCSHFPIIEKEINDIY-NDLTLLDPAEQMVENVRKYLKDKDLLKDNGTSHK 235 Query: 249 ALFLSGKPDIAMRRLMQ 265 L+ + + + + Sbjct: 236 TLYTTADILEFVSYIKR 252 >gi|332673655|gb|AEE70472.1| glutamate racemase [Helicobacter pylori 83] Length = 255 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 100/261 (38%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KYSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVLHLATSLFVPLIEEN-----ILESELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + + D+I + F Sbjct: 175 EVVILGCTHFPLIAHQIKGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|257456303|ref|ZP_05621500.1| glutamate racemase [Treponema vincentii ATCC 35580] gi|257446389|gb|EEV21435.1| glutamate racemase [Treponema vincentii ATCC 35580] Length = 255 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 6/249 (2%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSGIGGL + P+ YVAD FPYG + + + + I+++ P Sbjct: 1 MDSGIGGLPYFRYFHQKAPQAPAAYVADLEHFPYGEKTRDEVIRFAVGVTEKIINRLNPE 60 Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 + ++ CNT T D LR TF S+ F+G VPA+K AA + + I I++T T+ Y Sbjct: 61 MIIVVCNTMSTAALDALRKTF-SIPFVGTVPAVKVAAEVSVNKRIGIIATARTINDPYLD 119 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 LI S+ + C I + L +++E I ++E +K + + + TD +VLA Sbjct: 120 KLIESFAADCTIERRADAELVAKIENGL--ITAPDEEKRKAVMPAIRQFKAAGTDTLVLA 177 Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258 CTH+ + F + + + +D+ + A +LP T +++G+ Sbjct: 178 CTHFLHLADTFAECAAPEIKVVDSLPGVVSHALDVLPPPAGGNTSRSS---CYVTGEITE 234 Query: 259 AMRRLMQGF 267 + RL +G+ Sbjct: 235 RIDRLYRGY 243 >gi|308182705|ref|YP_003926832.1| glutamate racemase [Helicobacter pylori PeCan4] gi|308064890|gb|ADO06782.1| glutamate racemase [Helicobacter pylori PeCan4] Length = 255 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 97/263 (36%), Gaps = 19/263 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + +I +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI + + D+I + F Sbjct: 175 EVVILGCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVGYLQQ--KYTLKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269 SG ++ + L Sbjct: 233 KVEFHASGDVIWLEKQAKEWLAL 255 >gi|37811872|gb|AAR03940.1| glutamate racemase [Helicobacter pylori] Length = 255 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + +I +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALLTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|15611563|ref|NP_223214.1| glutamate racemase [Helicobacter pylori J99] gi|11133705|sp|Q9ZLT0|MURI_HELPJ RecName: Full=Glutamate racemase gi|151567728|pdb|2JFX|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate gi|151567729|pdb|2JFX|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate gi|151567730|pdb|2JFZ|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|151567731|pdb|2JFZ|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|168177008|pdb|2JFY|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate gi|168177009|pdb|2JFY|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate gi|217035286|pdb|2W4I|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|217035287|pdb|2W4I|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|217035288|pdb|2W4I|E Chain E, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|217035289|pdb|2W4I|F Chain F, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate And An Inhibitor gi|4155036|gb|AAD06074.1| GLUTAMATE RACEMASE [Helicobacter pylori J99] Length = 255 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 + L ++ACNTA L +E++ + + +G + A ++ I +L T AT+ Sbjct: 62 EIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + +I +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEE-----SILEGELLETCMHYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI P P + + D+I + + F Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALKNNACTFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG R+ + Sbjct: 233 KVEFHASGDVIWLERQAKEWL 253 >gi|261839621|gb|ACX99386.1| glutamate racemase [Helicobacter pylori 52] Length = 255 Score = 214 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQQDY-LNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I F Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFTLSTPPLLIHSGDAIVEYLHQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|306480261|emb|CBV36488.1| glutamate racemase [Helicobacter pylori] Length = 255 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA +L +E++ + + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASSLALEEMQ-KYSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R N + ++ +++ + +EE I E E+ + + Sbjct: 121 RSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I F Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLHQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVRLEKQAKEWL 253 >gi|328947305|ref|YP_004364642.1| glutamate racemase [Treponema succinifaciens DSM 2489] gi|328447629|gb|AEB13345.1| Glutamate racemase [Treponema succinifaciens DSM 2489] Length = 278 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 10/246 (4%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 DSG GG+ + ++ PE +Y+ D V FPYG + + ILD + Sbjct: 8 AFLDSGTGGIPYMLSLKEKSPESRCVYLGDTVHFPYGEKSEEEVTLCASESIEKILDLWN 67 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 P + VIACNT ++LR FP + +G VPAIK AA T++ I +L+T AT++ Y Sbjct: 68 PRIVVIACNTISVTALNQLRERFPDVPIVGTVPAIKLAAKVTKNKKIGLLATNATVKHPY 127 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 L+ + S + L + +E ++E ++ D I+ Sbjct: 128 CKKLVSDFASGYEVFNRGDPDLITFIEHDLFYA--SKEERTAAVKPAVDFFCSCGCDTII 185 Query: 197 LACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARCLLPRINTHQTR----VFDDH 248 L CTH+ + ++ ++ V +D+ D ++ A ++ + R + D Sbjct: 186 LGCTHFTHMAEDIKEYFSTVAGKKVFVVDSRDGVSNHALEVVKITSLENQREPKFLPPDM 245 Query: 249 ALFLSG 254 + F++ Sbjct: 246 SFFVTS 251 >gi|313681673|ref|YP_004059411.1| glutamate racemase [Sulfuricurvum kujiense DSM 16994] gi|313154533|gb|ADR33211.1| glutamate racemase [Sulfuricurvum kujiense DSM 16994] Length = 248 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 97/257 (37%), Gaps = 14/257 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL V++ + IY D PYG + + + + + + + Sbjct: 3 VGVFDSGVGGLSVVKSLLEHKLFEEIIYFGDTARVPYGVKDQNTIIRYSLEAL-EFFKNF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L + ACNT DE+R +G V A + I IL T AT+ Sbjct: 62 EIDLLITACNTVSAYALDEMREH-SHCDVIGVVDPGVLALKNAIPSNDANILILGTKATV 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + S + ++ +++ +L VEE + E E+ + + K Sbjct: 121 KSGAYEKGLRSLGYR-NLSAIATSLLVPIVEEG-----LYEGEVLQSALHHYFRDLEKTP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D I+L CTH+PL+ + + ++I + + + F Sbjct: 175 DAIILGCTHFPLVARAIDTYFEGKSTLIHSGEAIVEYLES---HYDFTKRFDTTNLKFFA 231 Query: 253 SGKPDIAMRRLMQGFGL 269 S P+ R + L Sbjct: 232 SENPEGLRRVAKEWLAL 248 >gi|224418377|ref|ZP_03656383.1| glutamate racemase [Helicobacter canadensis MIT 98-5491] gi|253827696|ref|ZP_04870581.1| glutamate racemase [Helicobacter canadensis MIT 98-5491] gi|313141908|ref|ZP_07804101.1| glutamate racemase [Helicobacter canadensis MIT 98-5491] gi|253511102|gb|EES89761.1| glutamate racemase [Helicobacter canadensis MIT 98-5491] gi|313130939|gb|EFR48556.1| glutamate racemase [Helicobacter canadensis MIT 98-5491] Length = 259 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 96/257 (37%), Gaps = 20/257 (7%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG+ VL + IY D PYG + + + D Sbjct: 4 KKIGLFDSGVGGISVLGNLINSKTFEEIIYYGDTARVPYGTRSKETIIQYSLEAL-DFFK 62 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA---AYTQSGLISILSTPA 130 +++ L V+ACNT + ++ + +G + A + I +L T A Sbjct: 63 QFKLDLLVVACNTISAYGLEAMQKA-TNYPIIGVIEPGVLALTNNLQNKDSKILVLGTKA 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ L+ + C I+ +++ + VEE G KI E + + + + Sbjct: 122 TIQSQLYQTLLENQGYSC-INSLATSLFVPLVEEGIFGGKILES-----VMEYYFQDYTE 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + D I+L CTH+PLI P + + +I + + + + Sbjct: 176 KPDAIILGCTHFPLISKTIAHYFQNKFPTPNKPILIHSGIAIMEYLKA---KYTLQKPSI 232 Query: 245 FDDHALFLSGKPDIAMR 261 + S + + Sbjct: 233 ASKVTFYASDNLEKLKK 249 >gi|37811906|gb|AAR03971.1| glutamate racemase [Helicobacter pylori] Length = 255 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI P P + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALPTPPLLIHSGDAIVGYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|46091437|dbj|BAD13881.1| HP0549 [Helicobacter pylori] Length = 286 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 93/249 (37%), Gaps = 19/249 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALGEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R N + ++ +++ + +EE I E E+ + + Sbjct: 121 RSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 175 EVVILGCTHFPLIAHQIEGYLMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGK 255 SG Sbjct: 233 KVEFHASGD 241 >gi|109947429|ref|YP_664657.1| glutamate racemase [Helicobacter acinonychis str. Sheeba] gi|123066226|sp|Q17XG8|MURI_HELAH RecName: Full=Glutamate racemase gi|109714650|emb|CAJ99658.1| murI [Helicobacter acinonychis str. Sheeba] Length = 255 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDSATIKQFSLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132 + L ++ACNTA L + ++ + +G + A ++ I +L T AT+ Sbjct: 62 EIELLIVACNTASALALETMQ-KHSKIPIVGVIEPSILAIKQHVKDKNTPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + N + ++ +++ + +EE + E E+ + + Sbjct: 121 RSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----VLEGELLETCMRYYFAPLKIFP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIESYFVEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNVYAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KIEFHASGDVIWLEQQAKEWL 253 >gi|238789626|ref|ZP_04633410.1| Glutamate racemase [Yersinia frederiksenii ATCC 33641] gi|238722379|gb|EEQ14035.1| Glutamate racemase [Yersinia frederiksenii ATCC 33641] Length = 212 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 4/208 (1%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ Sbjct: 2 LEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVG 60 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+T T+ +YT +LI + + C I L+ S L E G + + +KK + Sbjct: 61 LLATRGTVHASYTLDLIERFATDCKIELLGSSELVELAESKLHGGVVPVEALKKILHPWL 120 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + Sbjct: 121 MMREP--PDTIVLGCTHFPLLAEELAQVLPEGTRMVDSGAAIARRTAWLISSQENIISST 178 Query: 245 FDDHALFLSGKPDI-AMRRLMQGFGLKS 271 ++ A ++ D A+ ++QG+G + Sbjct: 179 DENIAYCMALNADTDALLPVLQGYGFPT 206 >gi|317180321|dbj|BAJ58107.1| glutamate racemase [Helicobacter pylori F32] Length = 255 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALGEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R N + ++ +++ + +EE I E E+ + + Sbjct: 121 RSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 175 EVVILGCTHFPLIAHQIEGYLMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|126695981|ref|YP_001090867.1| putative aspartate and glutamate racemases:glutamate racemase [Prochlorococcus marinus str. MIT 9301] gi|126543024|gb|ABO17266.1| Putative aspartate and glutamate racemases:Glutamate racemase [Prochlorococcus marinus str. MIT 9301] Length = 264 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 11/261 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ + IFDSGIGG +L + + + Y+AD P+GN + ++ + + Sbjct: 1 MKIKVGIFDSGIGGFTILNSLLKIRKDVEVFYLADTKRIPFGNKDSKEIRLIAKEICTFF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +DK L V ACNT D L + I + + +I +L+T T Sbjct: 61 VDKNLDALLV-ACNTTNACALDILEDNLK----IPCFDLINSVSELVEKQIIGVLATSTT 115 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R +Y I++ I S +E+ K+ D++ + K Sbjct: 116 VRSSYYEKAINTKKENTIILQQECPKFVSEIEK----EKLNLDKLNSLSDLYLRPLINKN 171 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249 + ++L C+HYPLI + R+ + +D S + ++ +P ++ F++ Sbjct: 172 IEELILGCSHYPLIYDILRKKLGPNIKIIDPSIGLIKKFNESFAIPETERCESISFENVK 231 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F++ + D ++ G+ Sbjct: 232 FFVTSERDNFSNKVKFWLGIN 252 >gi|37811838|gb|AAR03910.1| glutamate racemase [Helicobacter pylori] Length = 255 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 98/263 (37%), Gaps = 23/263 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS--------PWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 +V++L CTH+PLI P + + D+I + Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEYFALSTPP--LLIHSGDAIVEYLQQ--KYALKKNACA 230 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 F SG ++ + Sbjct: 231 FPKVEFHASGDVVWLEKQAKEWL 253 >gi|317012362|gb|ADU82970.1| glutamate racemase [Helicobacter pylori Lithuania75] Length = 255 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALKEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI + + D+I + T VF Sbjct: 175 EVVILGCTHFPLIAQKIGGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNTHVFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|297379750|gb|ADI34637.1| glutamate racemase [Helicobacter pylori v225d] Length = 255 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 175 EVVILGCTHFPLIAHPIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|317013968|gb|ADU81404.1| glutamate racemase [Helicobacter pylori Gambia94/24] Length = 255 Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 EIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 VI+L CTH+PLI P P + + D+I + F Sbjct: 175 KVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|188527606|ref|YP_001910293.1| glutamate racemase [Helicobacter pylori Shi470] gi|229486238|sp|B2UTT1|MURI_HELPS RecName: Full=Glutamate racemase gi|188143846|gb|ACD48263.1| glutamate racemase [Helicobacter pylori Shi470] Length = 255 Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|256544593|ref|ZP_05471965.1| glutamate racemase [Anaerococcus vaginalis ATCC 51170] gi|256399482|gb|EEU13087.1| glutamate racemase [Anaerococcus vaginalis ATCC 51170] Length = 249 Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 9/217 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL VL+++ + ++ Y+ D+ PYG+ + + + + +L K Sbjct: 3 NIGVFDSGLGGLTVLKELSKKH-KANYFYLGDNKNVPYGDKSNEEIIELSKKIVKFLLKK 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 VIACNT T+ + LR F AIK++ G I +++T AT + Sbjct: 62 -DIDFFVIACNTISTVAIEYLRKEFDKKFISITDQAIKKSLEC--EGDIFVMATKATCLQ 118 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 I S + + +L S +E+ +K D + K ++ K+ + Sbjct: 119 HTYKIKIEE-NSNKKVFEKACPLLVSLIEKGI----VKGDVLDKALKDYLELANEKKIEN 173 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 IVL CTHYP++ + + + +D ++ +A+ + Sbjct: 174 IVLGCTHYPIVEDEIFKNLNYKANIIDPANVLAQNIK 210 >gi|322379012|ref|ZP_08053415.1| glutamate racemase [Helicobacter suis HS1] gi|322380777|ref|ZP_08054883.1| glutamate racemase [Helicobacter suis HS5] gi|321146781|gb|EFX41575.1| glutamate racemase [Helicobacter suis HS5] gi|321148504|gb|EFX43001.1| glutamate racemase [Helicobacter suis HS1] Length = 260 Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 17/246 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL VL+ + H IY D PYG + ++K + D Y Sbjct: 12 VGVFDSGVGGLSVLESLLKARLFEHIIYYGDTARVPYGPKDPATIQKFSLEAL-DFFKPY 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133 Q + ++ACN+ ++R+ M +G + A + +Q I IL T AT+ Sbjct: 71 QIDMLIVACNSVSAWALPQMRNQ-SKMPIVGVIEAGVLSVLKKTSQEQPILILGTKATIA 129 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + ++ + ++ +++ + +EE + E + F + + Sbjct: 130 SNRYAKELGAHGYK-NVQSLATGLFVPLIEEGVLEGPLLEACM----VHYFKDLKCA-PS 183 Query: 194 VIVLACTHYPL----IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 V+VL CTH+P + F + P +++ + ++I + + N + Sbjct: 184 VVVLGCTHFPWIVSSLKGYFLERFKTPCEFVHSGEAIVEYLQ---EKYNLLSRNQESNLE 240 Query: 250 LFLSGK 255 LF SG Sbjct: 241 LFASGD 246 >gi|315453056|ref|YP_004073326.1| glutamate racemase [Helicobacter felis ATCC 49179] gi|315132108|emb|CBY82736.1| glutamate racemase [Helicobacter felis ATCC 49179] Length = 252 Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 98/259 (37%), Gaps = 18/259 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + IFDSG+GGL VL+ + IY D PYG + ++ + + Y Sbjct: 3 VGIFDSGVGGLSVLKSVLQARLFAEIIYYGDTARVPYGPKDKATIEHFALEAL-EFFKPY 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q + ++ACNT L +++R+ S+ +G + A A + I +L T AT+ Sbjct: 62 QIEMLIVACNTVSALALEKMRAH-SSIPIVGVIEAGILATIQQFPNKHTPILVLGTRATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + ++ ++ +++ + +EE + E + + + E Sbjct: 121 ASGQYAQHLSAHGY-SNVQSLATGLFVPLIEEG-----VLEGALLRACMQHYFENIQNAP 174 Query: 193 DVIVLACTHYPLIVHVFRQL----SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 V++L CTH+PLI + P + + D+I + + Sbjct: 175 TVLILGCTHFPLIASSLQNYFQTRFNHPCALVHSGDAIVHYLQD---THHLIPLNHPPQV 231 Query: 249 ALFLSGKPDIAMRRLMQGF 267 F SG + Sbjct: 232 RFFASGDVKTLKVQAKAWL 250 >gi|198284544|ref|YP_002220865.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666518|ref|YP_002427212.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249065|gb|ACH84658.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518731|gb|ACK79317.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 269 Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 13/263 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSGIGGL L +P+ H+++ D PYG+ +++ ++ + Sbjct: 3 IGIFDSGIGGLSTLLSCLRYLPDAHYLFYGDSAHAPYGDKSPAQVREWTEAAYAWFIAAG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + LR + +G PAI++A G + +L+T T+ Sbjct: 63 -VDAVVLACNTATSAAVAPLRERA-DVPIIGIEPAIRKALTEHPQGGVLLLATSITVGGE 120 Query: 136 Y-TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + L Q + ++ LA +E +++ + ++ V Sbjct: 121 KLRNLLNLLENGQERVRPLACSGLAEIIEAQDADWRLRAG---RYLQAQVRPARTADIGV 177 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDHA---L 250 +VL CTHY I + + +D ++ +AR+ R L I T HA L Sbjct: 178 VVLGCTHYCWIDDLIHDTLGGDITVVDGNEGVARQLCRRLGVPIRTDTAPPLPRHARISL 237 Query: 251 FLSGKPDI---AMRRLMQGFGLK 270 + + D+ R+L+ G++ Sbjct: 238 YFTANNDVKSHLARQLLAASGVR 260 >gi|108562952|ref|YP_627268.1| glutamate racemase [Helicobacter pylori HPAG1] gi|123373795|sp|Q1CTX8|MURI_HELPH RecName: Full=Glutamate racemase gi|107836725|gb|ABF84594.1| glutamate racemase [Helicobacter pylori HPAG1] Length = 255 Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI + + D+I + F Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|1752702|gb|AAC44708.1| Glr [Helicobacter pylori] Length = 255 Score = 212 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQ--KYALKKNAHAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|238750876|ref|ZP_04612374.1| Glutamate racemase [Yersinia rohdei ATCC 43380] gi|238711020|gb|EEQ03240.1| Glutamate racemase [Yersinia rohdei ATCC 43380] Length = 211 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 4/208 (1%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 M + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ Sbjct: 1 MEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNGVVG 59 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 +L+T T+ +YT +LI + + C I L+ S L E G + + +KK + Sbjct: 60 LLATRGTVHASYTLDLIERFATDCKIELLGSSDLVELAETKLHGGTVPTEALKKILHPWL 119 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 + +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + Sbjct: 120 MMREP--PDTIVLGCTHFPLLAAELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSST 177 Query: 245 FDDHALFLSGKPDI-AMRRLMQGFGLKS 271 ++ A ++ D A+ ++QG+G + Sbjct: 178 DENIAYCMALNADTDALLPVLQGYGFPT 205 >gi|308061881|gb|ADO03769.1| glutamate racemase [Helicobacter pylori Cuz20] Length = 255 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 100/262 (38%), Gaps = 21/262 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA----IKQAAAYTQSGLISILSTPAT 131 + L ++ACNTA L +E++ + +G + IKQ ++ I +L T AT Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILSIKQQVKD-KNAPILVLGTKAT 119 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ N + ++ +++ + +EE I E E+ + + Sbjct: 120 IQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEIL 173 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245 +V++L CTH+PLI H + + D+I + F Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACTF 231 Query: 246 DDHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253 >gi|254779458|ref|YP_003057563.1| glutamate racemase [Helicobacter pylori B38] gi|254001369|emb|CAX29354.1| Glutamate racemase [Helicobacter pylori B38] Length = 255 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 97/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQIKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|45656923|ref|YP_001009.1| glutamate racemase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|59798336|sp|Q72TI2|MURI_LEPIC RecName: Full=Glutamate racemase gi|45600160|gb|AAS69646.1| glutamate racemase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 256 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 14/264 (5%) Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++ I + DSG+GGL VL+++ E +Y D PYG + + + + + + Sbjct: 1 MKEPLKIGLMDSGMGGLSVLKELLKYDSELEIVYYGDLKNSPYGEKDASEVLELVRSVCN 60 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L K ++ACNTA + LR F S+ G PAIK A +++L+TP Sbjct: 61 -FLQKENVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKVALLATP 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T R L ++ + +S LA V++ D+ +K + + Sbjct: 119 VTQREEKLQRLKSELKAEELVLSISCPGLAGLVDQGDF------DKAEKYLRPILANLQE 172 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 + + +VL CTHY + + + P V D + + L ++ + Sbjct: 173 QDVENLVLGCTHYVFLKQIILKNFP-NVKIYDGNSGTIKHLLNSLQVPRVILNGSQNNRS 231 Query: 250 LF---LSGKPDIAMRRLMQGFGLK 270 ++ L+ + + R + LK Sbjct: 232 IYKLILNSEKEFHFRLASKLLSLK 255 >gi|24215750|ref|NP_713231.1| glutamate racemase [Leptospira interrogans serovar Lai str. 56601] gi|59798407|sp|Q8F1S7|MURI_LEPIN RecName: Full=Glutamate racemase gi|24196929|gb|AAN50249.1| glutamate racemase [Leptospira interrogans serovar Lai str. 56601] Length = 256 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 14/264 (5%) Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++ I + DSG+GGL VL+++ E +Y D PYG + + + + + + Sbjct: 1 MKEPLKIGLMDSGMGGLSVLKELLKYDSELEIVYYGDLKNSPYGEKDASEVLELVRSVCN 60 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L K ++ACNTA + LR F S+ G PAIK A +++L+TP Sbjct: 61 -FLQKENVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKVALLATP 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T R L ++ + +S LA V++ D+ +K + + Sbjct: 119 VTQREEKLQRLKSELKAEELVLSISCPGLAGLVDQGDF------DKAEKYLRPILANLQE 172 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 + + +VL CTHY + + + P V D + + L ++ + Sbjct: 173 QDVENLVLGCTHYVFLKQIILKNFP-NVKIYDGNSGTIKHLLNSLQVPRVILNGSQNNRS 231 Query: 250 LF---LSGKPDIAMRRLMQGFGLK 270 ++ L+ + + R + LK Sbjct: 232 IYKLILNSEKEFHFRLASELLSLK 255 >gi|47093489|ref|ZP_00231251.1| glutamate racemase [Listeria monocytogenes str. 4b H7858] gi|47018107|gb|EAL08878.1| glutamate racemase [Listeria monocytogenes str. 4b H7858] Length = 211 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 74/202 (36%), Gaps = 7/202 (3%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126 ++ L + VIACNTA ++R + +G + P + A T++ I +L Sbjct: 1 MTNFLVDRGIKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVL 59 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + + + ++ S VE + K KK + + Sbjct: 60 GTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLP 115 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 + + D ++L CTHYPL+ + V +++ + A LL N + Sbjct: 116 LKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEE 175 Query: 247 -DHALFLSGKPDIAMRRLMQGF 267 +H F +G I Sbjct: 176 IEHRFFTTGSTQIFKDIAKDWL 197 >gi|315586766|gb|ADU41147.1| glutamate racemase [Helicobacter pylori 35A] Length = 255 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSILAINQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R N + ++ +++ + +EE I E E+ + + Sbjct: 121 RSHAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|317177617|dbj|BAJ55406.1| glutamate racemase [Helicobacter pylori F16] Length = 255 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 99/263 (37%), Gaps = 23/263 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS--------PWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 +V++L CTH+PLI H P + + D+I + Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEYFALSTPP--LLIHSGDAIVEYLQQ--KYALKKNACA 230 Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267 F SG ++ + Sbjct: 231 FPKVEFHASGDVVWLEKQAKEWL 253 >gi|254525989|ref|ZP_05138041.1| glutamate racemase [Prochlorococcus marinus str. MIT 9202] gi|221537413|gb|EEE39866.1| glutamate racemase [Prochlorococcus marinus str. MIT 9202] Length = 264 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 15/263 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + IFDSGIGG +L + + Y+AD P+G ++ + + Sbjct: 1 MNLKVGIFDSGIGGFTILNSLLKTRKDVEVFYLADTKRIPFGGKNFKEIRLIAKEICNFF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +DK L V ACNT D + + P + +V I +I +L+T Sbjct: 61 VDKNLDALLV-ACNTTNACALDIMENNLKVPCFDLINSVSGIVD------KQIIGVLATQ 113 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+R +Y N I+S I S +E+ K+ D++ + Sbjct: 114 TTVRSSYYKNAINSKKENTIIFQQECPEFVSEIEK----EKLNLDKLNYLSDLYLRPLIN 169 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDD 247 K + ++L C+HYPLI R+ + +D S ++ +R +P+ ++ +++ Sbjct: 170 KNIEELILGCSHYPLIYDFLRKKLDSNITIIDPSVALIKRFNKFFDIPKTACYERLSYEN 229 Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270 F++ + D ++ G+ Sbjct: 230 VEFFVTSERDEFSNKVKFWLGIN 252 >gi|319760706|ref|YP_004124644.1| glutamate racemase [Candidatus Blochmannia vafer str. BVAF] gi|318039420|gb|ADV33970.1| glutamate racemase [Candidatus Blochmannia vafer str. BVAF] Length = 281 Score = 211 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 3/222 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 +++LI DSG+GGL + +R ++P +++Y+ D+ FPYGN + + +R++ + I Sbjct: 12 STVLILDSGVGGLFFYETVRRIVPFVNYLYLIDNKCFPYGNCSEKFIIQRVILIIERICR 71 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + L VIACNT + L+ F +G VP I+ A T++G++ IL T T+ Sbjct: 72 FLKFDLVVIACNTISVVALSILQINFR-FPIIGVVPEIQLACQCTKNGVVGILGTCRTVN 130 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 Y N I + + +I L+ + L E G + + E+ + K D Sbjct: 131 NKYIFNSIKRFAYKKNIVLLGTSRLVELAESKVYGNLVSKLELIDILNPWL--NLKKIPD 188 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 IVL CTH+ + + + P +D+S+ + + LL Sbjct: 189 TIVLGCTHFSWLKSELQSVLPVDSCLIDSSNRLINHIKYLLN 230 >gi|308063661|gb|ADO05548.1| glutamate racemase [Helicobacter pylori Sat464] Length = 255 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L E++ P + +G ++ AIKQ ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALKEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|302381780|ref|YP_003817603.1| glutamate racemase [Brevundimonas subvibrioides ATCC 15264] gi|302192408|gb|ADK99979.1| Glutamate racemase [Brevundimonas subvibrioides ATCC 15264] Length = 312 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 95/277 (34%), Gaps = 26/277 (9%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL V +++ +Y+AD P G+ + + + + Sbjct: 31 AIGVFDSGVGGLTVHRELTRRFSTRDLVYLADQANAPIGSRSGEEIVEITRNGCERLF-Q 89 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF---------PSMAFLGAV-PAIKQAAAYTQS---- 120 + V+ACNTA + L+ T+ + LG + P I+ A + Sbjct: 90 AGASVVVLACNTASAVALRRLQQTWVAEAAVRHGRPLNVLGIIVPTIEAATGLPWTYEAE 149 Query: 121 ---------GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 + + T AT I + LA +E A ++ Sbjct: 150 RLGDKVEAIDITGVFCTAATAISRVYEIEIDKRREDLAVFSEPCPGLAGLIELGAPTEEL 209 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 + ++ + G+ D +L CTHY ++ +F P + ++A Sbjct: 210 -RVVVADHVDA-LRRRIGRHPDTAILGCTHYEIVADLFAAALPDGTTLIHQPSAVADALE 267 Query: 232 CLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 R + +GK R+ Q +G Sbjct: 268 RYFARHPEYALGDSGRRTFLTTGKTGPQSDRVSQFWG 304 >gi|326385030|ref|ZP_08206702.1| glutamate racemase [Gordonia neofelifaecis NRRL B-59395] gi|326196244|gb|EGD53446.1| glutamate racemase [Gordonia neofelifaecis NRRL B-59395] Length = 220 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 83/216 (38%), Gaps = 9/216 (4%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQA 114 ++K + + +++ + VIACNTA + R + + + + PA+++A Sbjct: 2 SIPEIRKHALAIGDELVQRG-VKAIVIACNTASAACLRDARERYAPIPVIEVILPAVRRA 60 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 T++G I ++ T AT+ + + I V VE + Sbjct: 61 VVATKTGRIGVIGTEATIASRAYQDSFAA-ARDVEITAVPCPRFVDFVERGITSGR---- 115 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 +I EG + D +VL CTHYPL+ V + + V + +++ A+ +L Sbjct: 116 QILGLAEGYLEPLQEADVDTLVLGCTHYPLLSGVVQLVMGDEVTLVSSAEETAKDTFRVL 175 Query: 235 PRINTHQTRVFDD--HALFLSGKPDIAMRRLMQGFG 268 +T +G P+ + + G Sbjct: 176 TESDTLHPHTNRQARRQFSATGDPESFRKLSTRFLG 211 >gi|37811807|gb|AAR03882.1| glutamate racemase [Helicobacter pylori] Length = 255 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 97/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI + + D+I + F Sbjct: 175 EVVILGCTHFPLIARQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253 >gi|255020717|ref|ZP_05292777.1| Glutamate racemase [Acidithiobacillus caldus ATCC 51756] gi|254969833|gb|EET27335.1| Glutamate racemase [Acidithiobacillus caldus ATCC 51756] Length = 274 Score = 210 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 100/257 (38%), Gaps = 11/257 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL L +P + + D PYG+ + +++ + L Sbjct: 3 IGVFDSGLGGLSTLLACLRYLPSAEYRFFGDVAHAPYGDKDPQVVRRWTAEAYERFLAAG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ACNTA + LR P + LG PAIK+A +SG I +L+T T+R Sbjct: 63 -VDAVVLACNTATSAAAAPLREQSP-VPILGLEPAIKKALDV-ESGPILLLATTLTVRGD 119 Query: 136 YTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKI-KEDEIKKEIEGCFIEKEGKRTD 193 L+ +Q + V+ L VE + E ++ + F+E K Sbjct: 120 KLRALLQRMDGAQQRVRAVACPGLMEIVEAQTTDWRAQAESYWRERLLPHFVELRPKG-- 177 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---L 250 +VL CTHY + FR D +D +AR L A L Sbjct: 178 -LVLGCTHYCWLEDAFRDWVGPGCRVYDGNDGLARHLWRRLYGTEAPAPGALPQVARVQL 236 Query: 251 FLSGKPDIAMRRLMQGF 267 S K + ++ Sbjct: 237 EFSAKREEKTQQASAWL 253 >gi|30959110|gb|AAO73314.1| glutamate racemase [Helicobacter pylori] Length = 231 Score = 210 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 17/226 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + +I +++ + +EE G E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEESILGG-----ELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARC 232 +VI+L CTH+PLI + + D+I + Sbjct: 175 EVIILGCTHFPLIAQKIESYFMEHFALLTPPLLIHSGDAIVEYLQQ 220 >gi|238799428|ref|ZP_04642856.1| Glutamate racemase [Yersinia mollaretii ATCC 43969] gi|238716722|gb|EEQ08610.1| Glutamate racemase [Yersinia mollaretii ATCC 43969] Length = 211 Score = 210 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 4/206 (1%) Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L Sbjct: 3 IVTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLL 61 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T T+ +YT +LI + + C I L+ S L E G + + +KK + Sbjct: 62 ATRGTVHASYTLDLIARFATDCKIELLGSSELVELAETKLHGGVVPVEALKKILHPWLAM 121 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246 +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + + Sbjct: 122 REP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSSQDE 179 Query: 247 DHALFLSGKPDI-AMRRLMQGFGLKS 271 + A ++ D A+ ++QG+G + Sbjct: 180 NMAYCMALNVDTDALLPVLQGYGFPT 205 >gi|15615633|ref|NP_243937.1| glutamate racemase [Bacillus halodurans C-125] gi|10175693|dbj|BAB06790.1| glutamate racemase [Bacillus halodurans C-125] Length = 200 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 7/185 (3%) Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + VIACNTA ++ DE++ P + +G V P A T++ ++++ T T++ Sbjct: 1 MLVIACNTAAAVVLDEVKEKLP-IPVVGVVQPGAISALKVTKNEHVAVIGTTGTIQSGAY 59 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + ++ + ++ VE E + +GK D ++L Sbjct: 60 EHTLKKINNRVQVESLACPPFVPLVERGI----FSGPEALETCSETLKPLQGKGFDTLIL 115 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKP 256 CTHYPL+ V +++ + + + D AR LL +T +H + +G Sbjct: 116 GCTHYPLLKPVIQEVMGPDIQIISSGDETAREVSGLLYHKQRLRTCNEAPEHHFYTTGDA 175 Query: 257 DIAMR 261 R Sbjct: 176 KSFKR 180 >gi|261838209|gb|ACX97975.1| glutamate racemase [Helicobacter pylori 51] Length = 255 Score = 209 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 94/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T A + Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAMI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI + + D+I F Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFALSAPPLLIHSGDAIVEYLHQ--KYALKKNACAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253 >gi|301166907|emb|CBW26486.1| putative glutamate racemase [Bacteriovorax marinus SJ] Length = 256 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 12/255 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 SI IFDSGIGG +L+K+ L PE Y+AD PYGN + R +L +++ K Sbjct: 8 SIGIFDSGIGGFSILKKIHELAPELEVYYIADQGFAPYGNKSRKEVIDRCHYLCHELM-K 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132 + L V+ACNTA + DELR+TF ++ F+G P + + +T +S +++T Sbjct: 67 FDLDLIVVACNTATGVAIDELRNTF-TIPFVGVEPFVNALSKHTWKESDRACVITTELMS 125 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L++ + + LA+ VE++ E+E+ +++ Sbjct: 126 KSERFQKLVNRLDPDKRLFYKVTPGLATIVEDFFINK--NEEELNLKLKEELSFVGESSY 183 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 ++L CTHYPLI + V L +A R LL + + F F Sbjct: 184 SHLILGCTHYPLIAKYIEATTGASV--LSPCLYVANRVLSLLDLSSGENSETFQ----FA 237 Query: 253 SGKPDIAMRRLMQGF 267 S + +R + + F Sbjct: 238 STAKEDVLRFVSKDF 252 >gi|217967731|ref|YP_002353237.1| glutamate racemase [Dictyoglomus turgidum DSM 6724] gi|217336830|gb|ACK42623.1| glutamate racemase [Dictyoglomus turgidum DSM 6724] Length = 265 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 13/256 (5%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I I DSG+GGL VL+++ ++ D FPYG +++R+ + S Sbjct: 2 SKIGILDSGVGGLSVLKEVYLNNLADEVYFLGDTKYFPYGIKPVEFIQERVFEIVSFF-K 60 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +IACNTA ++ D L+ F + V + A ++ I +L+T T+ Sbjct: 61 SLGVEEVIIACNTASSVAYDFLKDRFRDLKIHSIVLGAIEGAKNYKAKKIGVLATRRTME 120 Query: 134 RTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 LIH +S +++ S +E GI ++ + I+KEI C K Sbjct: 121 SNIYPRLIHEKISDKIEVYVQSCSE-GPLLETIEKGI-VEGELIEKEIMRCIDPLVEKNI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 + ++L CTH P + V + L P + +D S + R + +F+ Sbjct: 179 EGLILGCTHLPFVKKVIKDLYP-NLFVVDPSLEVINFLRS--------DSNFNTKVEIFV 229 Query: 253 SGKPDIAMRRLMQGFG 268 +G+ + L + G Sbjct: 230 TGEAEEFQGILNKLLG 245 >gi|291277066|ref|YP_003516838.1| putative glutamate racemase [Helicobacter mustelae 12198] gi|290964260|emb|CBG40109.1| putative glutamate racemase [Helicobacter mustelae 12198] Length = 309 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 81/217 (37%), Gaps = 10/217 (4%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 IFDSG GGL VL+ + IY D PYG ++ + +L + Sbjct: 4 GIFDSGAGGLSVLEHVLRAEIFDSIIYYGDTARLPYGTKHPDSIICFCLEALEFLLVQ-N 62 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG---LISILSTPATLR 133 + ++ACNTA D ++ P + +G + A I +L T AT++ Sbjct: 63 VDIIIVACNTASAHALDAMQKAAPKIPIIGVIEPGILAIKNRLKNLDAKILVLGTKATIQ 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + +I + + + S VEE + E+ ++ + D Sbjct: 123 SAQYQRHLEKLGY-SNITAIPTSLFVSLVEEGIFEGPLVEECLR-----YYFGGIDFVPD 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 I+L CTH+PL+ + ++I + Sbjct: 177 AIILGCTHFPLLQKPIAAYFQNKSLLIHAGEAIVQYI 213 >gi|91070263|gb|ABE11182.1| putative aspartate and glutamate racemases:glutamate racemase [uncultured Prochlorococcus marinus clone HF10-11H7] Length = 264 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 11/261 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I IFDSGIGG +L + + Y+AD P+GN ++ + + Sbjct: 1 MKLKIGIFDSGIGGFTILNSLLKTRQDVEVFYLADTKRIPFGNKNSKEIRLIAKEICTFF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +DK L V ACNT D L F I + +I +L+T T Sbjct: 61 VDKNLDALLV-ACNTTNACALDILEDNLKVPCF----DLINSVSEIVDKRIIGVLATQTT 115 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +R +Y I++ I S +E+ K+ D++ + K Sbjct: 116 VRSSYYKKAINAKKESTIIFQQECPKFVSEIEK----EKLNLDKLNTLSDLYLRPLIIKN 171 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249 + ++L C+HYPLI R+ + +D S ++ ++ +P +++ ++ Sbjct: 172 IEELILGCSHYPLIYDFLRKKLDSNIKIIDPSVALIKKFNESFAIPENYRYESISLENVK 231 Query: 250 LFLSGKPDIAMRRLMQGFGLK 270 F++ + D ++ G+ Sbjct: 232 FFVTSERDEFFNKVKFWLGIN 252 >gi|33435087|gb|AAP39987.2| glutamate racemase [Helicobacter acinonychis] Length = 255 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FD+G+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDTGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDSATIKQFSLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132 + L ++ACNTA L + ++ + +G + A ++ I +L T AT+ Sbjct: 62 EIELLIVACNTASALALETMQ-KHSKIPIVGVIEPSILAIKQHVKDKNTPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + N + ++ +++ + +EE + E E+ + + Sbjct: 121 RSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----VLEGELLETCMRYYFAPLKIFP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIESYFVEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNVYAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KIEFHASGDVIWLEQQAKEWL 253 >gi|157413034|ref|YP_001483900.1| glutamate racemase [Prochlorococcus marinus str. MIT 9215] gi|157387609|gb|ABV50314.1| Glutamate racemase [Prochlorococcus marinus str. MIT 9215] Length = 264 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 15/263 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + IFDSGIGG +L + + Y+AD P+G ++ + + Sbjct: 1 MNLKVGIFDSGIGGFTILNSLLKTRKDIEVFYLADTKRIPFGGKNFVEIRLIAKEICNFF 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +DK L V ACNT D + + P + +V I +I +L+T Sbjct: 61 VDKNLDALLV-ACNTTNACALDIMENNLKVPCFDLINSVSGIVD------KQIIGVLATQ 113 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+R +Y N I+S I S +E+ K+ D++ + Sbjct: 114 TTVRSSYYKNAINSKKENTIIFQQECPEFVSEIEK----EKLNLDKLNYLSDLYLRPLIN 169 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDD 247 K + ++L C+HYPLI R+ + +D S ++ ++ +P+ ++ +++ Sbjct: 170 KNIEELILGCSHYPLIYDFLRKKLDSNITIIDPSVALIKKFNQFFDIPKTACYEGLSYEN 229 Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270 F++ K D ++ G+ Sbjct: 230 VEFFVTSKRDEFSSKVKFWLGIN 252 >gi|167467898|ref|ZP_02332602.1| glutamate racemase [Yersinia pestis FV-1] Length = 198 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 101/180 (56%), Gaps = 1/180 (0%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+ Sbjct: 80 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T AT+ +YT +LI + + C I L+ S L E G + + +KK + + Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 198 >gi|30959108|gb|AAO73313.1| glutamate racemase [Helicobacter pylori] Length = 231 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 17/226 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARC 232 +VI+L CTH+PLI H P P + + D+I + Sbjct: 175 EVIILGCTHFPLIAHQIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ 220 >gi|197693662|gb|ACH71500.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220 +V++L CTH+PLI L Sbjct: 175 EVVILGCTHFPLIAQKIESYFMEHFALL 202 >gi|254419828|ref|ZP_05033552.1| Asp/Glu/Hydantoin racemase superfamily [Brevundimonas sp. BAL3] gi|196186005|gb|EDX80981.1| Asp/Glu/Hydantoin racemase superfamily [Brevundimonas sp. BAL3] Length = 285 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 99/282 (35%), Gaps = 34/282 (12%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I +FDSG+GGL V +++ P+ F+Y+AD PYG + + + + Sbjct: 2 AIGVFDSGVGGLTVHRELTRRFPQRDFVYLADQAHAPYGGRGGEDIVELTRAGCERLFEA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP---------SMAFLGAVPA-------------IK 112 + V+ACNTA + L+ T+ + LG + + Sbjct: 62 GA-SVVVLACNTASAIALRRLQQTWIPGLRERLGRPVNVLGIIVPTIEAATGKPWSFEAE 120 Query: 113 QAAAYTQSGLI---SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 +AA + I + T AT I + LA +E A Sbjct: 121 RAAEGDKVEAIAVTGVFCTAATAISRVFEIEIDKRREDIAVFSEPCPGLAGLIELGA--- 177 Query: 170 KIKEDEIKKEIEGC---FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 +E+K ++ + G+ D +L CTHY +I +F P ++ ++ Sbjct: 178 --PREELKVVVDDHVDALRRRIGRHPDKAILGCTHYEIIAELFASALPAGTVLINQPTAV 235 Query: 227 ARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 A R + +G+ + Q +G Sbjct: 236 ADALERYFARHPEFELGDSGRRDFLTTGQAGPQSEMVSQFWG 277 >gi|32265523|ref|NP_859555.1| glutamate racemase [Helicobacter hepaticus ATCC 51449] gi|32261571|gb|AAP76621.1| glutamate racemase [Helicobacter hepaticus ATCC 51449] Length = 247 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 84/254 (33%), Gaps = 14/254 (5%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL+ + IY D PYG + + K + + + Sbjct: 4 GVFDSGVGGLSVLKSLINAKLFEDIIYYGDTARVPYGVKDKQTIIKFSLQAL-EFFTPHN 62 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL---ISILSTPATLR 133 + ++ACNT E++ + +G + A I I++T AT+ Sbjct: 63 IDILIVACNTVSAYALQEMQ-KHSKIPIVGVIEPGVLAVQNNLKDTDSEILIIATRATIN 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + ++ +++ + VEE + E + Sbjct: 122 SGEYETRLRNI-GFWNLKSLATGLFVPIVEEGLLEGAVLESVFHHYFASITTPPQ----- 175 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 ++L CTH+PLI + + ++I + ++ F S Sbjct: 176 AVILGCTHFPLIAPALDSYFNHQSMLIHSGEAIVEYLKN---HLHLTSRYALKSLQFFAS 232 Query: 254 GKPDIAMRRLMQGF 267 + + Sbjct: 233 DNTAALTKIANKWL 246 >gi|197693576|gb|ACH71457.1| glutamate racemase [Helicobacter pylori] gi|197693766|gb|ACH71552.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 206 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L V+ACNTA L +E++ F + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLVVACNTASALALEEMQKHFK-IPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195 >gi|197693664|gb|ACH71501.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 206 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + +I +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220 +V++L CTH+PLI L Sbjct: 175 EVVILGCTHFPLIAQKIESYFMEHFALL 202 >gi|126728656|ref|ZP_01744471.1| Glutamate racemase [Sagittula stellata E-37] gi|126710586|gb|EBA09637.1| Glutamate racemase [Sagittula stellata E-37] Length = 251 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 89/246 (36%), Gaps = 19/246 (7%) Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92 +P+ F+Y AD PYG + + + S + D+ L V+ACNTA Sbjct: 1 MKRLPDVPFVYFADSAHAPYGVRDANDIYDLTTQAVSRLWDEG-CDLVVLACNTASAAAL 59 Query: 93 DELRSTF--PSMAFLGAVPAIKQAAAYTQSG-----------LISILSTPATLRRTYTSN 139 ++ ++ LG + +A Q G +++ +TPAT+R Sbjct: 60 RRMQESWVPRDKRVLGVFVPLIEALTARQWGDNSPPREVGIQHVALFATPATVRSRAFQR 119 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + + + L +EE + + E ++ ++ ++++ + +L C Sbjct: 120 ELAFRAIGVDVEAQACGGLVDAIEEG--DMILAEALVRSHVDA--LKRKMPTPEAAILGC 175 Query: 200 THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA 259 THYPL+ +F+ V + + L R R +G P Sbjct: 176 THYPLMQDIFQDALGPDVHVYSQATLVPDSLADYLDRHPDMLGRGTTS-RFLTTGDPARV 234 Query: 260 MRRLMQ 265 R Q Sbjct: 235 SRHATQ 240 >gi|237752367|ref|ZP_04582847.1| glutamate racemase [Helicobacter winghamensis ATCC BAA-430] gi|229375856|gb|EEO25947.1| glutamate racemase [Helicobacter winghamensis ATCC BAA-430] Length = 258 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 16/258 (6%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG GG+ VL+ + +Y D PYG +++ + D Sbjct: 11 QRIGVFDSGAGGISVLKNLIESHNFKEILYYGDTARVPYGVKSKDTIRQYSLEAL-DFFS 69 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPA 130 ++ L ++ACNTA ++ P +G + A A ++ I IL T A Sbjct: 70 PFKLDLLIVACNTASAYGLSAMQEVAP-YPVIGVIEPGILALQNAIQDKNAKILILGTKA 128 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ S L+ + +++ + VEE I + I ++ Sbjct: 129 TICSNLYSKLL-REKGYLNTFGLATSLFVPIVEEGIFEGAILDSTIAHYLKQY-----PS 182 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249 + I+L CTH+PLI + + + ++I L T Q+ + Sbjct: 183 TPNAIILGCTHFPLIANSIANFYSNKPLLIHSGEAI----MEYLQNFYTLQSFKETPKVK 238 Query: 250 LFLSGKPDIAMRRLMQGF 267 + S + + Sbjct: 239 FYASDYVENLEKIANLWL 256 >gi|197693566|gb|ACH71452.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220 +VI+L CTH+PLI L Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFTLL 202 >gi|197693570|gb|ACH71454.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 205 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQHVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693568|gb|ACH71453.1| glutamate racemase [Helicobacter pylori] gi|197693714|gb|ACH71526.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693858|gb|ACH71598.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693558|gb|ACH71448.1| glutamate racemase [Helicobacter pylori] gi|197693586|gb|ACH71462.1| glutamate racemase [Helicobacter pylori] gi|197693614|gb|ACH71476.1| glutamate racemase [Helicobacter pylori] gi|197693616|gb|ACH71477.1| glutamate racemase [Helicobacter pylori] gi|197693620|gb|ACH71479.1| glutamate racemase [Helicobacter pylori] gi|197693768|gb|ACH71553.1| glutamate racemase [Helicobacter pylori] gi|197693770|gb|ACH71554.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L V+ACNTA L +E++ F + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLVVACNTASALALEEMQKHFK-IPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195 >gi|197693644|gb|ACH71491.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|224437846|ref|ZP_03658793.1| glutamate racemase [Helicobacter cinaedi CCUG 18818] gi|313144294|ref|ZP_07806487.1| glutamate racemase [Helicobacter cinaedi CCUG 18818] gi|313129325|gb|EFR46942.1| glutamate racemase [Helicobacter cinaedi CCUG 18818] Length = 246 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 14/254 (5%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSGIGGL VL+ + IY D PYG + + + + D + Sbjct: 4 GVFDSGIGGLSVLKSLINAKLFDEIIYYGDTARVPYGVKDKQTIIRFSLEAL-DFFKPHN 62 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL---ISILSTPATLR 133 + ++ACNT +E++ + +G + A I IL+T AT+ Sbjct: 63 IDILIVACNTVSAYALEEMQ-KHSKIPIVGVIEPGVLAVQNKLKDTDSEILILATRATIN 121 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + ++ +++ + VEE + E +G Sbjct: 122 SGEYETRLRKI-GFWNLKSLATGLFVPLVEEGLLEGAVLESVFDYYFSNFTNPPKG---- 176 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 I+L CTH+PLI + + ++I L + F S Sbjct: 177 -IILGCTHFPLIADALSAYFNNQSVLIHSGEAIVEYLETHLQLRTQY---PLKSLQFFAS 232 Query: 254 GKPDIAMRRLMQGF 267 + + Sbjct: 233 DNTASLTKIAQKWL 246 >gi|24113787|ref|NP_708297.1| glutamate racemase [Shigella flexneri 2a str. 301] gi|24052869|gb|AAN44004.1| similar to glutamate racemase [Shigella flexneri 2a str. 301] gi|281601863|gb|ADA74847.1| glutamate racemase [Shigella flexneri 2002017] gi|332766260|gb|EGJ96470.1| glutamate racemase [Shigella flexneri 2930-71] Length = 273 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 10/251 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL ++++ L+P IY D++ PYGN + + + + Sbjct: 8 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFL 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L +ACNT + ++ E +FP L + + Q + I++ Sbjct: 68 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 125 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ LI S ++ S LA +EE ++IKK + I Sbjct: 126 TEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 184 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 I+L CTHYP++ + F ++P + +++ + A + L ++N + Sbjct: 185 HPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 241 Query: 248 HALFLSGKPDI 258 + SG +I Sbjct: 242 LQINTSGSMEI 252 >gi|197693862|gb|ACH71600.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPATIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTLLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693626|gb|ACH71482.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|217077581|ref|YP_002335299.1| glutamate racemase [Thermosipho africanus TCF52B] gi|217037436|gb|ACJ75958.1| glutamate racemase [Thermosipho africanus TCF52B] Length = 263 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 116/253 (45%), Gaps = 28/253 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGG+ VL+K+ ++ H+IY+AD PYG + + +F F++ K Sbjct: 3 IGLFDSGIGGISVLKKLTYIN-GAHYIYIADTERAPYGIKTPE-VLESFIFEFAEFFHKK 60 Query: 76 QPVLSVIACNTAFTLIKD---ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ACNT ++I + +L + S+ IK A +S + ++ T T+ Sbjct: 61 GVNEIFAACNTTDSIILEKNLDLGIKYNSI--------IKAAIQAPKSEKVGVIGTNITV 112 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + ++ S+ + S VEE ++ ++ + + K Sbjct: 113 SNGIYKKYLEMENKE--VYQKSTQLFVSLVEEGIFYGRM----VEAIANYYLLPLKKKNI 166 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 + ++L CTH+P + V ++ P V +D ++ ++++ L + N+ + V ++ Sbjct: 167 EELILGCTHFPFLKGVISRVLP-KVRIIDPAEELSKK----LAKNNSKKAFV----EFYV 217 Query: 253 SGKPDIAMRRLMQ 265 +G P + ++L + Sbjct: 218 TGDPKVFEKKLKR 230 >gi|333001587|gb|EGK21155.1| glutamate racemase [Shigella flexneri VA-6] Length = 269 Score = 204 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 10/251 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL ++++ L+P IY D++ PYGN + + + + Sbjct: 4 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFL 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L +ACNT + ++ E +FP L + + Q + I++ Sbjct: 64 QSR-NVKLVAVACNTISSTLESEKYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 121 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ LI S ++ S LA +EE ++IKK + I Sbjct: 122 TEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 180 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 I+L CTHYP++ + F ++P + +++ + A + L ++N + Sbjct: 181 HPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 237 Query: 248 HALFLSGKPDI 258 + SG +I Sbjct: 238 LQINTSGSMEI 248 >gi|313650908|gb|EFS15308.1| glutamate racemase [Shigella flexneri 2a str. 2457T] gi|332755494|gb|EGJ85858.1| glutamate racemase [Shigella flexneri K-671] gi|333001965|gb|EGK21531.1| glutamate racemase [Shigella flexneri K-218] Length = 269 Score = 204 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 10/251 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL ++++ L+P IY D++ PYGN + + + + Sbjct: 4 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFL 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L +ACNT + ++ E +FP L + + Q + I++ Sbjct: 64 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 121 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ LI S ++ S LA +EE ++IKK + I Sbjct: 122 TEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 180 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 I+L CTHYP++ + F ++P + +++ + A + L ++N + Sbjct: 181 HPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 237 Query: 248 HALFLSGKPDI 258 + SG +I Sbjct: 238 LQINTSGSMEI 248 >gi|197693548|gb|ACH71443.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 204 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIARQIESYF 195 >gi|300025005|ref|YP_003757616.1| glutamate racemase [Hyphomicrobium denitrificans ATCC 51888] gi|299526826|gb|ADJ25295.1| Glutamate racemase [Hyphomicrobium denitrificans ATCC 51888] Length = 281 Score = 204 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 98/262 (37%), Gaps = 23/262 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+ + F+Y+AD PYGN A+ D+ + Sbjct: 2 IGVFDSGLGGLTVLRVLTQRFKAADFVYLADHAHVPYGNRPSDAIVGYTRDCVEDLFARG 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-------PSMAFLGAVPAIKQAAAYT---------- 118 L ++ CNTA + L+ + + LG V +AA T Sbjct: 62 A-KLVLLGCNTATAVALRRLQQEWLPRSPWAGTHNVLGIVAPTVEAATQTPWAVTSPQYP 120 Query: 119 ---QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + I + T T+ I + + LA +EE + E+ Sbjct: 121 QKYNTDTIGVFGTTRTVTAGVYPEEIGKRCPKVTVVQQICSELAGAIEEKQPEAHL-EEL 179 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 ++ I G + +G +L CTH+PL+ H+FR+ P L + ++ L Sbjct: 180 VRAGITGLLDQTDGVPPHRAILGCTHFPLVEHLFRKHLPPFTRILSQPEVVSDSFEDYLA 239 Query: 236 RI-NTHQTRVFDDHALFLSGKP 256 R + L +G P Sbjct: 240 RRSHYLNGDESGSLTLLTTGDP 261 >gi|197693716|gb|ACH71527.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 204 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693628|gb|ACH71483.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 204 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKNKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + +I +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +V++L CTH+PLI Sbjct: 175 EVVILGCTHFPLIAQKIESYF 195 >gi|33433444|gb|AAP39989.2| glutamate racemase [Helicobacter acinonychis] Length = 255 Score = 204 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 97/261 (37%), Gaps = 19/261 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FD+G+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDTGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDSATIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132 + L ++ACNTA L + ++ + +G + A ++ I +L T AT+ Sbjct: 62 EIELLIVACNTASALALETMQ-KHSKIPIVGVIEPSILAIKQHVKDKNTPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFAPLKIFP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +VI+L CTH+PLI + + D+I + F Sbjct: 175 EVIILGCTHFPLIAQKIESYFVEHFILSKTPLLIHSGDAIVEYLQQ--KYALKKNVYAFP 232 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 233 KIEFHASGDVIWLEKQAKEWL 253 >gi|10955413|ref|NP_053125.1| hypothetical protein pB171_063 [Escherichia coli] gi|6009439|dbj|BAA84898.1| orf63 [Escherichia coli] Length = 273 Score = 204 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 10/251 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL ++++ L+P IY D+ PYGN + + + + Sbjct: 8 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFL 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L +ACNT + ++ E +FP L + + Q + I++ Sbjct: 68 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 125 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ LI +I S LA +EE ++IKK + I Sbjct: 126 TEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 184 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 I+L CTHYP++ ++F ++P + +++ + A + L ++N + Sbjct: 185 HPVN--EIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 241 Query: 248 HALFLSGKPDI 258 + SG +I Sbjct: 242 LQINTSGSMEI 252 >gi|197693560|gb|ACH71449.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|116327584|ref|YP_797304.1| glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331805|ref|YP_801523.1| glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280458|sp|Q04QQ5|MURI_LEPBJ RecName: Full=Glutamate racemase gi|122284619|sp|Q053X4|MURI_LEPBL RecName: Full=Glutamate racemase gi|116120328|gb|ABJ78371.1| Glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125494|gb|ABJ76765.1| Glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 258 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 14/264 (5%) Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 ++ I + DSG+GGL VL+ + E +Y D PYG E + + + + Sbjct: 1 MKGPLKIGLMDSGMGGLSVLKGILKYDAELEVVYYGDLKNSPYGEKETSEILELVRDVCK 60 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + ++ ++ACNTA + LR F S+ G PAIK A I++L+TP Sbjct: 61 RLQEE-NVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKIALLATP 118 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T R L ++ I VS LA V++ DE +K + + Sbjct: 119 VTQREKKLQRLKAELGAEELILPVSCPGLAGLVDKGEF------DEAEKYLRPILKKLRE 172 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFD 246 + + +VL CTHY + H+ + P V D + + L R++ + Sbjct: 173 ENVENLVLGCTHYIFLKHIILKNFP-NVRIYDGNSGTIKHLLNSLQVRQRVSNRSSVSGS 231 Query: 247 DHALFLSGKPDIAMRRLMQGFGLK 270 + L L+ ++ R + + Sbjct: 232 VYKLILNSDEELHFRLATELLQFE 255 >gi|190014952|ref|YP_001965464.1| Putative glutamate racemase [Escherichia coli] gi|109389673|gb|ABG29592.1| Putative glutamate racemase [Escherichia coli] Length = 273 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 10/251 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL ++++ L+P IY D+ PYGN + + + + Sbjct: 8 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFL 67 Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L +ACNT + ++ E +FP L + + Q + I++ Sbjct: 68 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 125 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ LI +I S LA +EE ++IKK + I Sbjct: 126 TEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 184 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 + I+L CTHYP++ ++F ++P + +++ + A + L ++N + Sbjct: 185 HP--VNEIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 241 Query: 248 HALFLSGKPDI 258 + SG +I Sbjct: 242 LQINTSGSMEI 252 >gi|194430317|ref|ZP_03062810.1| glutamate racemase [Escherichia coli B171] gi|194411647|gb|EDX27976.1| glutamate racemase [Escherichia coli B171] Length = 269 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 10/251 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL ++++ L+P IY D+ PYGN + + + + Sbjct: 4 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFL 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L +ACNT + ++ E +FP L + + Q + I++ Sbjct: 64 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 121 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ LI +I S LA +EE ++IKK + I Sbjct: 122 TEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 180 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 I+L CTHYP++ ++F ++P + +++ + A + L ++N + Sbjct: 181 HPVN--EIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 237 Query: 248 HALFLSGKPDI 258 + SG +I Sbjct: 238 LQINTSGSMEI 248 >gi|197693800|gb|ACH71569.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEG-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIESYF 195 >gi|215276268|ref|YP_002332231.1| putative glutamate racemase [Escherichia coli O127:H6 str. E2348/69] gi|312964743|ref|ZP_07778984.1| glutamate racemase [Escherichia coli 2362-75] gi|215267864|emb|CAS07533.1| putative glutamate racemase [Escherichia coli O127:H6 str. E2348/69] gi|312290592|gb|EFR18471.1| glutamate racemase [Escherichia coli 2362-75] Length = 269 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 10/251 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ I + DSG+GGL ++++ L+P IY D+ PYGN + + + + Sbjct: 4 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFL 63 Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L +ACNT + ++ E +FP L + + Q + I++ Sbjct: 64 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 121 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T++ LI +I S LA +EE ++IKK + I Sbjct: 122 TEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 180 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 I+L CTHYP++ ++F ++P + +++ + A + L ++N + Sbjct: 181 HPVN--EIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 237 Query: 248 HALFLSGKPDI 258 + SG +I Sbjct: 238 LQINTSGSMEI 248 >gi|197693704|gb|ACH71521.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693650|gb|ACH71494.1| glutamate racemase [Helicobacter pylori] gi|197693652|gb|ACH71495.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195 >gi|197693758|gb|ACH71548.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|197693720|gb|ACH71529.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693624|gb|ACH71481.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ F + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHFK-IPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVVHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI Sbjct: 175 EVVILGCTHFPLIARQIEGYFMEHFAL 201 >gi|197693612|gb|ACH71475.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +V++L CTH+PLI Sbjct: 175 EVVILGCTHFPLIAQKIEGYF 195 >gi|197693698|gb|ACH71518.1| glutamate racemase [Helicobacter pylori] gi|197693700|gb|ACH71519.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693606|gb|ACH71472.1| glutamate racemase [Helicobacter pylori] gi|197693760|gb|ACH71549.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|197693872|gb|ACH71605.1| glutamate racemase [Helicobacter pylori] gi|197693874|gb|ACH71606.1| glutamate racemase [Helicobacter pylori] gi|197693876|gb|ACH71607.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI H Sbjct: 175 EVIILGCTHFPLIAHQIEGYF 195 >gi|197693666|gb|ACH71502.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVANKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI H Sbjct: 175 EVIILGCTHFPLIAHQIEGYF 195 >gi|197693860|gb|ACH71599.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKRQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693816|gb|ACH71577.1| glutamate racemase [Helicobacter pylori] gi|197693818|gb|ACH71578.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693722|gb|ACH71530.1| glutamate racemase [Helicobacter pylori] gi|197693724|gb|ACH71531.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + + + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALNFF-KPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693772|gb|ACH71555.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ F + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQKHFK-IPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195 >gi|197693864|gb|ACH71601.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693646|gb|ACH71492.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPATIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|144898237|emb|CAM75101.1| Asp/Glu racemase [Magnetospirillum gryphiswaldense MSR-1] Length = 198 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 2/178 (1%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 I +FDSG+GGL VL+ +R +P IY+ D PYG A+ + ++ + Sbjct: 8 PIGVFDSGVGGLTVLKALRERLPAESLIYLGDTARLPYGTKSAAAVSHYALQAAHALV-R 66 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133 V+A NT+ + LR+ FP + G V P AA + G I +++T +T++ Sbjct: 67 MGIKALVVADNTSSAHALEALRAEFPGLPVTGVVEPGAAAAALASAQGRIVVIATDSTVQ 126 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 IH+ + + + S VEE I E + ++ F + + Sbjct: 127 AGTYPRAIHNSRPGARVISKACPLFVSMVEEGMTDGPIAEQLARHYLDPLFANADEDK 184 >gi|197693706|gb|ACH71522.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693670|gb|ACH71504.1| glutamate racemase [Helicobacter pylori] gi|197693672|gb|ACH71505.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|30961743|gb|AAP39988.1| glutamate racemase [Helicobacter acinonychis] Length = 232 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 90/226 (39%), Gaps = 17/226 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FD+G+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDTGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDSATIKQFSLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132 + L ++ACNTA L + ++ + +G + A ++ I +L T AT+ Sbjct: 62 EIELLIVACNTASALALETMQ-KHSKIPIVGVIEPSILAIKQHVKDKNTPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R + N + ++ +++ + +EE + E E+ + + Sbjct: 121 RSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----VLEGELLETCMRYYFAPLKIFP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARC 232 +VI+L CTH+PLI + + D+I + Sbjct: 175 EVIILGCTHFPLIAQKIESYFVEHFALSTPPLLIHSGDAIVEYLQQ 220 >gi|197693868|gb|ACH71603.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKEKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693738|gb|ACH71538.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIARKIEGYF 195 >gi|197693630|gb|ACH71484.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195 >gi|197693848|gb|ACH71593.1| glutamate racemase [Helicobacter pylori] gi|197693850|gb|ACH71594.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693712|gb|ACH71525.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693832|gb|ACH71585.1| glutamate racemase [Helicobacter pylori] gi|197693834|gb|ACH71586.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI H Sbjct: 175 EVIILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693806|gb|ACH71572.1| glutamate racemase [Helicobacter pylori] gi|197693808|gb|ACH71573.1| glutamate racemase [Helicobacter pylori] gi|197693810|gb|ACH71574.1| glutamate racemase [Helicobacter pylori] gi|197693812|gb|ACH71575.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693588|gb|ACH71463.1| glutamate racemase [Helicobacter pylori] gi|197693852|gb|ACH71595.1| glutamate racemase [Helicobacter pylori] gi|197693854|gb|ACH71596.1| glutamate racemase [Helicobacter pylori] gi|197693856|gb|ACH71597.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693718|gb|ACH71528.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|258645749|ref|ZP_05733218.1| glutamate racemase [Dialister invisus DSM 15470] gi|260403118|gb|EEW96665.1| glutamate racemase [Dialister invisus DSM 15470] Length = 258 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 105/272 (38%), Gaps = 27/272 (9%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL V ++ P FI++ D PYGN + Sbjct: 1 MDNRP--------IGIMDSGVGGLTVACVLKEKYPNEKFIFIGDTARNPYGNKSPEEVT- 51 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA---VPAIKQAAAYTQ 119 L Q + + ACNT + + +G P ++ Sbjct: 52 FFAEEMKAFLAGKQVKMIIAACNTITFSVPPSFFE--GKIPVIGMSLDFPELESV----- 104 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 ++++ TP T+R + ++ + LA +E + +E I + Sbjct: 105 -NHLAVIGTPMTIRSHRHRERLKKDFPLMNVTEIPIDGLAYAIE-----MGKEESFIYRM 158 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 I + + D VLACTHYPL+ VFR + P + +D ++ ++A +L N Sbjct: 159 INKAVQKAGAESVDAAVLACTHYPLVAGVFRDILPNTL-LIDPAERTVKKAMSILADQN- 216 Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 Q+ F + A + + FG ++ Sbjct: 217 GQSEEAGPCLFFFTESTLRAEILVKKMFGRRA 248 >gi|197693564|gb|ACH71451.1| glutamate racemase [Helicobacter pylori] gi|197693744|gb|ACH71541.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVEDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|77412365|ref|ZP_00788676.1| glutamate racemase [Streptococcus agalactiae CJB111] gi|77161585|gb|EAO72585.1| glutamate racemase [Streptococcus agalactiae CJB111] Length = 159 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +D+ P I DSG+GGL V+++M +PE I++ D PYG +++ Sbjct: 1 MDSRP--------IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121 + + +L K + VIACNTA + E++ + LG + P A T SG Sbjct: 53 FTWQMVNFLLTK-NVKMIVIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNSG 110 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167 + I+ TP T++ I + + ++ VE C Sbjct: 111 KVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESIRC 156 >gi|197693804|gb|ACH71571.1| glutamate racemase [Helicobacter pylori] gi|197693836|gb|ACH71587.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVANKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 VI+L CTH+PLI Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195 >gi|197693550|gb|ACH71444.1| glutamate racemase [Helicobacter pylori] gi|197693776|gb|ACH71557.1| glutamate racemase [Helicobacter pylori] gi|197693778|gb|ACH71558.1| glutamate racemase [Helicobacter pylori] gi|197693780|gb|ACH71559.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFAPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195 >gi|197693728|gb|ACH71533.1| glutamate racemase [Helicobacter pylori] gi|197693866|gb|ACH71602.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693574|gb|ACH71456.1| glutamate racemase [Helicobacter pylori] gi|197693740|gb|ACH71539.1| glutamate racemase [Helicobacter pylori] gi|197693742|gb|ACH71540.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFGEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +V++L CTH+PLI Sbjct: 175 EVVILGCTHFPLIAQKIEGYF 195 >gi|197693634|gb|ACH71486.1| glutamate racemase [Helicobacter pylori] gi|197693636|gb|ACH71487.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +V++L CTH+PLI Sbjct: 175 EVVILGCTHFPLIAQKIEGYF 195 >gi|197693552|gb|ACH71445.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +V++L CTH+PLI Sbjct: 175 EVVILGCTHFPLIAQKIEGYF 195 >gi|197693632|gb|ACH71485.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|197693684|gb|ACH71511.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693796|gb|ACH71567.1| glutamate racemase [Helicobacter pylori] gi|197693798|gb|ACH71568.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|197693638|gb|ACH71488.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIARRIEGYF 195 >gi|197693710|gb|ACH71524.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE G E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGG-----ELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693610|gb|ACH71474.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693608|gb|ACH71473.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693702|gb|ACH71520.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVEDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693676|gb|ACH71507.1| glutamate racemase [Helicobacter pylori] gi|197693678|gb|ACH71508.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693682|gb|ACH71510.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQIKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693708|gb|ACH71523.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNTPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693546|gb|ACH71442.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|197693764|gb|ACH71551.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI H Sbjct: 175 EVIILGCTHFPLIAHQIEGYF 195 >gi|197693594|gb|ACH71466.1| glutamate racemase [Helicobacter pylori] gi|197693596|gb|ACH71467.1| glutamate racemase [Helicobacter pylori] gi|197693822|gb|ACH71580.1| glutamate racemase [Helicobacter pylori] gi|197693824|gb|ACH71581.1| glutamate racemase [Helicobacter pylori] gi|197693826|gb|ACH71582.1| glutamate racemase [Helicobacter pylori] gi|197693828|gb|ACH71583.1| glutamate racemase [Helicobacter pylori] gi|197693830|gb|ACH71584.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI H Sbjct: 175 EVIILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693820|gb|ACH71579.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693754|gb|ACH71546.1| glutamate racemase [Helicobacter pylori] gi|197693756|gb|ACH71547.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|197693600|gb|ACH71469.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693870|gb|ACH71604.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDKALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|325956149|ref|YP_004286759.1| glutamate racemase [Lactobacillus acidophilus 30SC] gi|325332714|gb|ADZ06622.1| glutamate racemase [Lactobacillus acidophilus 30SC] gi|327182953|gb|AEA31400.1| glutamate racemase [Lactobacillus amylovorus GRL 1118] Length = 268 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 93/243 (38%), Gaps = 11/243 (4%) Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 + +K+ +P +++ D+ PYGN + +L L + ACNTA Sbjct: 18 IAKKVIEKLPNESTVFIGDNAHMPYGNRTKEDIINLTRRSVKFLL-NNDVKLVIFACNTA 76 Query: 88 FTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146 + +G + A+ T++ +++++T T+ IH Sbjct: 77 TAAAMGTIEKEI-EPQIIGVIQSGALAASRTTKNKKVAVVATSVTVGSHAYEKEIHFRDP 135 Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 + + +++ LA VE K ++ +GK D +VL CTHYPLI Sbjct: 136 EIEVTELATPKLAPLVEAQEE-----HATNLKVVKESLAPLKGKDFDTLVLGCTHYPLIE 190 Query: 207 HVFRQLS-PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALFLSGKPDIAMRRLM 264 F++ V LD +D +A+ ++ R H + +G + +L Sbjct: 191 QEFKEAIDDENVTILDPADQVAQYTFNVMRRDGLFSEEGHKPVHEYYTTGN-STSFDKLA 249 Query: 265 QGF 267 + F Sbjct: 250 RTF 252 >gi|197693690|gb|ACH71514.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPVVGVIGPSILAIKQQVK-NKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693648|gb|ACH71493.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 VI+L CTH+PLI Sbjct: 175 KVIILGCTHFPLIAQKIEGYF 195 >gi|197693668|gb|ACH71503.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHXIEGYFMEHFAL 201 >gi|197693746|gb|ACH71542.1| glutamate racemase [Helicobacter pylori] gi|197693748|gb|ACH71543.1| glutamate racemase [Helicobacter pylori] gi|197693750|gb|ACH71544.1| glutamate racemase [Helicobacter pylori] gi|197693752|gb|ACH71545.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A + I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKKAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + + +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLSVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|197693674|gb|ACH71506.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVED-KNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693686|gb|ACH71512.1| glutamate racemase [Helicobacter pylori] gi|197693688|gb|ACH71513.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693762|gb|ACH71550.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI H Sbjct: 175 EVIILGCTHFPLIAHRIEGYF 195 >gi|197693734|gb|ACH71536.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693622|gb|ACH71480.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693654|gb|ACH71496.1| glutamate racemase [Helicobacter pylori] gi|197693656|gb|ACH71497.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 EIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLEACMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220 +VI+L CTH+PLI L Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALL 202 >gi|288921254|ref|ZP_06415538.1| glutamate racemase [Frankia sp. EUN1f] gi|288347344|gb|EFC81637.1| glutamate racemase [Frankia sp. EUN1f] Length = 277 Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 95/255 (37%), Gaps = 9/255 (3%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FDSG+GG V + + +P +++ + PYG ++ + + Sbjct: 4 APIGVFDSGVGGRTVARAIGDRLPARPLLHLGETANAPYGPQPGAEVRPPAPAVLDQPVA 63 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 L VIA N+A + R + VP +A A T+SG + ++ T AT Sbjct: 64 AG-VKLLVIAGNSAGAACLRDARERYDVPVVEVIVPTTCRAVAATRSGRVGVVGTVATNA 122 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + + S + V+ + V E + E+ E + D Sbjct: 123 SRAYEDAFSA-ASGTELVSVACPAFGAFVVEGITSGR----ELLGLTEAYRAPLQEADVD 177 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALF 251 ++L CT YPL+ V + V + +++ + +L R + H L Sbjct: 178 TVILGCTRYPLLTGVTGLVPGEGVTLVRSAEETSEATDRVLARDGRFRDPDLPPPAHRLP 237 Query: 252 LSGKPDIA-MRRLMQ 265 G P + RRL Q Sbjct: 238 APGAPAASRTRRLRQ 252 >gi|197693658|gb|ACH71498.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 11/208 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE G E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGG-----ELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220 +VI+L CTH+PLI L Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALL 202 >gi|197693694|gb|ACH71516.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYGNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693580|gb|ACH71459.1| glutamate racemase [Helicobacter pylori] gi|197693696|gb|ACH71517.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693640|gb|ACH71489.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMHYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAXKIEGYF 195 >gi|197693794|gb|ACH71566.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|197693592|gb|ACH71465.1| glutamate racemase [Helicobacter pylori] gi|197693838|gb|ACH71588.1| glutamate racemase [Helicobacter pylori] gi|197693840|gb|ACH71589.1| glutamate racemase [Helicobacter pylori] gi|197693842|gb|ACH71590.1| glutamate racemase [Helicobacter pylori] gi|197693844|gb|ACH71591.1| glutamate racemase [Helicobacter pylori] gi|197693846|gb|ACH71592.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|197693642|gb|ACH71490.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|291059797|gb|ADD72532.1| glutamate racemase [Treponema pallidum subsp. pallidum str. Chicago] Length = 311 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 15/274 (5%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M + + ++ Q + DSGIGGL +R +PE +YVAD V FPYGN + Sbjct: 42 MSMSDR--REQFQYA--FLDSGIGGLPYAHALRVRVPEASLVYVADRVYFPYGNKSSAQI 97 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 R + + + P + V+ACN+ + LR+ VPAIKQA A + Sbjct: 98 IARASAVLQKVQTNFSPHIVVLACNSMSVNALEFLRAQVSVPVVG-VVPAIKQAVACSHK 156 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L+T T+ YT+ L + + C + + L +E I ED ++ + Sbjct: 157 KHIGVLATQCTITHPYTACLRAQFGAGCVFQMRADARLIECLERGL--IFEVEDMQREAV 214 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + DV+VLACTH+ + H+F+ +D+ + + RR L P Sbjct: 215 ARSVMPFQEAGVDVLVLACTHFVHVRHLFQDCVGTSCTVVDSLEGVVRRTLRLCP----P 270 Query: 241 QTRVFDDHALFLSGKPDIA----MRRLMQGFGLK 270 Q+++ + A +++G D R Q FGL+ Sbjct: 271 QSQLRGNAACYVTGARDAVCAARYARYAQHFGLR 304 >gi|197693584|gb|ACH71461.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + S +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVSLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|197693726|gb|ACH71532.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T A + Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAMI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693598|gb|ACH71468.1| glutamate racemase [Helicobacter pylori] gi|197693774|gb|ACH71556.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195 >gi|213420373|ref|ZP_03353439.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 156 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 60/156 (38%), Positives = 94/156 (60%), Gaps = 1/156 (0%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 T LI + ++C I ++ S L E G + Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVS 156 >gi|56459706|ref|YP_154987.1| glutamate racemase [Idiomarina loihiensis L2TR] gi|56178716|gb|AAV81438.1| Glutamate racemase [Idiomarina loihiensis L2TR] Length = 248 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 102/259 (39%), Gaps = 18/259 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + +FDSG+GGL V + ++ +Y D PYG+ + + + + + + + Sbjct: 3 VGVFDSGVGGLTVARSLQQSGCFSELLYYGDTARVPYGSKDSNTVTRYALEAV-EFFNGA 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ----SGLISILSTPAT 131 V+ACNT ++++ F + G + A Q S + +++T +T Sbjct: 62 DVDCLVVACNTVSVTALEQMQ-KFSNKPVYGVLEPGVMALEQLQGIDTSAQVLVIATRST 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + I + ++ +++ + VEE I ++ K + ++ Sbjct: 121 INSGAYQQQIQALGYN-QVNAMATPLFVPIVEEELYDGPILQETFKHYF------GKLEK 173 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV++L CTH+PLI + + +++ L ++ + Sbjct: 174 PDVVLLGCTHFPLIAESISAYF-NGAKTIHSGEAM---LAWLKQHLDLSAQFDRTPLHII 229 Query: 252 LSGKPDIAMRRLMQGFGLK 270 + D A++R +GLK Sbjct: 230 ATENVD-AVKRTATRWGLK 247 >gi|197693692|gb|ACH71515.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+ Sbjct: 62 KIGLLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693590|gb|ACH71464.1| glutamate racemase [Helicobacter pylori] gi|197693782|gb|ACH71560.1| glutamate racemase [Helicobacter pylori] gi|197693784|gb|ACH71561.1| glutamate racemase [Helicobacter pylori] gi|197693786|gb|ACH71562.1| glutamate racemase [Helicobacter pylori] gi|197693788|gb|ACH71563.1| glutamate racemase [Helicobacter pylori] gi|197693790|gb|ACH71564.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFAPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 VI+L CTH+PLI Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195 >gi|197693660|gb|ACH71499.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 11/208 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE G E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGG-----ELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220 +VI+L CTH+PLI L Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALL 202 >gi|197693578|gb|ACH71458.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFAPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 VI+L CTH+PLI Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195 >gi|197693730|gb|ACH71534.1| glutamate racemase [Helicobacter pylori] gi|197693732|gb|ACH71535.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 199 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQIKD-KNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693736|gb|ACH71537.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 199 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D Y Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPY 61 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQIKD-KNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|46200986|ref|ZP_00055981.2| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1] Length = 243 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 8/237 (3%) Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95 MP+ +Y+ D PYG + + + +++K V+ACNTA + D + Sbjct: 1 MPDEQLLYLGDVARQPYGTKSPRTVTRYAVQAAEFLVEKG-IKALVVACNTASAVALDAI 59 Query: 96 RSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154 FP + LG V A AA + G I + +T T R I + V Sbjct: 60 EQRFPGLPVLGVVEAGADGAARASPQGRIVVAATEGTCRSEAYERAIARRRGGAQVRCVP 119 Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 + + EE I E + + F +G D +VL CTH+PL+ +L+ Sbjct: 120 CPLFVALAEEGLTDGPIVESVARHYLGSLFDGSQGG--DCLVLGCTHFPLLAPALARLAG 177 Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMR---RLMQGFG 268 V +D +++ + LL + L + P+ R RL G Sbjct: 178 PGVTLVDCAEATSAMLVRLLAGREAPRGN-GGGLRLISTDAPERFARMAGRLFPSLG 233 >gi|197693562|gb|ACH71450.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFAPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 VI+L CTH+PLI Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195 >gi|197693572|gb|ACH71455.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195 >gi|150021250|ref|YP_001306604.1| glutamate racemase [Thermosipho melanesiensis BI429] gi|149793771|gb|ABR31219.1| glutamate racemase [Thermosipho melanesiensis BI429] Length = 263 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 110/253 (43%), Gaps = 28/253 (11%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGG+ VL+K+ ++ H+IY+AD PYG AL+ + K Sbjct: 3 IGLFDSGIGGISVLKKLTYIN-GAHYIYIADTERAPYGLRTSEALESFVWEFVDFFHKKK 61 Query: 76 QPVLSVIACNTAFTLIKD---ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + ACNT ++I + +L + S+ I+ + +S + ++ T T+ Sbjct: 62 VNEIF-AACNTTDSIILENNLDLVIKYNSI--------IRAGVSAAKSSKVGVIGTNVTI 112 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + V ++ ++ + S VEE ++ ++ + + + Sbjct: 113 KNGSYRRYLE--VEGKEVYQKATQLFVSLVEEGVFYGRM----VEAIANYYLLPLKKENV 166 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 ++L CTH+P + + ++ P V +D ++ LL + NT + V ++ Sbjct: 167 KELILGCTHFPFLKGIISRVLP-KVRIIDPAEE----LSKLLVKNNTRRPFV----EFYV 217 Query: 253 SGKPDIAMRRLMQ 265 +G P R+L + Sbjct: 218 TGDPKEFERKLKR 230 >gi|197693802|gb|ACH71570.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE G ++ E ++ I + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGGELLETCMRYYFTPLKILPK---- 175 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 VI+L CTH+PLI Sbjct: 176 -VIILGCTHFPLIARQIEGYF 195 >gi|30961747|gb|AAP39990.1| glutamate racemase [Helicobacter acinonychis] Length = 232 Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 17/226 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FD+G+GG VL+ + + IY D PYG + +K+ + D + Sbjct: 3 IGVFDTGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDSATIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132 + L ++ACNTA L + ++ + +G + A ++ I +L T AT+ Sbjct: 62 EIELLIVACNTASALALETMQ-KHSKIPIVGVIEPSILAIKQHVKDKNTPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFAPLKIFP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARC 232 +VI+L CTH+PLI + + D+I + Sbjct: 175 EVIILGCTHFPLIAQKIESYFVEHFILSKTPLLIHSGDAIVEYLQQ 220 >gi|7415851|dbj|BAA93558.1| glutamate racemase [Escherichia coli O157:H7] Length = 209 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 4/200 (2%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+ Sbjct: 5 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 63 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +R+YT LI + ++C I ++ S + E G + D +K+ + KE Sbjct: 64 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--P 121 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 D +VL CTH+PL+ Q+ P +D+ +IARR LL + A + Sbjct: 122 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 181 Query: 253 SGKPD-IAMRRLMQGFGLKS 271 + P+ + ++Q +G ++ Sbjct: 182 AMTPEAEQLLPVLQRYGFET 201 >gi|206901151|ref|YP_002251063.1| glutamate racemase [Dictyoglomus thermophilum H-6-12] gi|206740254|gb|ACI19312.1| glutamate racemase [Dictyoglomus thermophilum H-6-12] Length = 266 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 12/256 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 + I I DSG+GGL VL+++ F ++ D FPYG +++R+ + S Sbjct: 2 SKIGILDSGVGGLSVLKEVYFNNLADEVYFLGDTKYFPYGIKPVEFIQERVFEIVSFF-K 60 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 + ++ACNTA ++ D L F + V + + +L+T T Sbjct: 61 NFGVEEVIVACNTASSVAYDFLVDNFRDIKIHSIVLGAIEGIKSYTFKKVGVLATKRTKE 120 Query: 134 RTYTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 NLIH +++ S +E GI ++ + I+KEI C Sbjct: 121 SNIYPNLIHERISKNVEVYVQSCSE-GPLLETIEKGI-VEGEIIEKEIIKCTDPLVENGI 178 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 + ++L CTH P I V + L P + +D S + R L + N+ + + +F+ Sbjct: 179 EGLILGCTHLPFIKGVIKNLYP-NLFIVDPSLEVVR----FLSKTNSIDEK---NVEIFV 230 Query: 253 SGKPDIAMRRLMQGFG 268 +G+ + L + G Sbjct: 231 TGEAEEFQAILNKLLG 246 >gi|87118931|ref|ZP_01074829.1| Glutamate racemase [Marinomonas sp. MED121] gi|86165322|gb|EAQ66589.1| Glutamate racemase [Marinomonas sp. MED121] Length = 290 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 15/268 (5%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 + + ++ I I DSG GGL VL + Y + Y ADD PYG+ +++ Sbjct: 1 MSEIKVDSGVRPKIGILDSGAGGLTVLAALIKSNKAYDYYYFADDAFAPYGSLSIDKIQQ 60 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA----FLGAVPAIKQAAAYT 118 R++ + ++DK L VIACNTA + +RS + +G PAIK A+ Sbjct: 61 RVLSICDFLIDKGVTSL-VIACNTATLEVIHLVRSCPKVIEKNILIVGIEPAIKPASLLD 119 Query: 119 QSGLISILSTPATLRRTYTSNLI-----HSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 G++ +L+TP T + LI + H ++S +LA+ ++ + Sbjct: 120 YQGVVCVLATPITCQSNRLQALINHASLNRVSQSSRYHCIASEVLANAIDALPGSGSRVD 179 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 E+++ I E + + ++VLACTHYPLI +F L +PV L+ SD++ARR Sbjct: 180 LELQR-IRAIMAELDSR---ILVLACTHYPLIKSMFEGLFDYPVQILEPSDAVARRVIDC 235 Query: 234 LPRINTHQTRVFDDHALFLSGKPDIAMR 261 LP ++ +L+ SG + R Sbjct: 236 LPSMHLG-GHESLSVSLYSSGDNQMESR 262 >gi|254468115|ref|ZP_05081521.1| glutamate racemase [beta proteobacterium KB13] gi|207086925|gb|EDZ64208.1| glutamate racemase [beta proteobacterium KB13] Length = 263 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 10/251 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I+IFDSG+GG +L+++ L IYVAD+ PYG ++KR+ +FS + +Y Sbjct: 8 IIIFDSGLGGTSILKEIISLNLSQQLIYVADNQYLPYGLQTKDFIEKRVCEIFSSLNQQY 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + SVIACNTA + LR F + P IK A T++ I IL+T T++ + Sbjct: 68 RIEASVIACNTATAYAANSLRGKFK-FPIVAMEPGIKPAINLTKNNNIGILATEGTIKSS 126 Query: 136 YTSNLIHSYVSQCH-IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 +L+ + S H I ++ + L +E + K + + I E D Sbjct: 127 RFISLVDRFTSDQHKICIIPGVGLVEEIENQSTSNKKLDAILLPIINQLLQE----EADT 182 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHYPLI + ++L P + +D + ++ L I+ S Sbjct: 183 LVLGCTHYPLIKNKLKKLLPE-IQIVDTTKAV---LNVLTGYIDQIHPSEQKTILFMTSK 238 Query: 255 KPDIAMRRLMQ 265 + + ++ + Sbjct: 239 DEETYLSKIKK 249 >gi|197693814|gb|ACH71576.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDS +GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSSVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE G E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGG-----ELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201 >gi|197693680|gb|ACH71509.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 + L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 EIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVEDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QFNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219 +V++L CTH+PLI H Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201 >gi|197693556|gb|ACH71447.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 VI+L CTH+PLI Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195 >gi|183220317|ref|YP_001838313.1| glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910434|ref|YP_001961989.1| glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775110|gb|ABZ93411.1| Glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778739|gb|ABZ97037.1| Glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 270 Score = 197 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 93/244 (38%), Gaps = 14/244 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+ + +IY D V PYG + + F +++K Sbjct: 9 IGIFDSGLGGLSVLRTLWKETSNIDYIYFGDLVHSPYGQKSKQKVIELSKNAFEYLIEK- 67 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + ACNTA + D LR S+ G PAIK A A I++ +T TL+ Sbjct: 68 DCEAVLFACNTATSAAADFLRKEH-SIPIFGMEPAIKPALAENPGVKIAVFATDLTLKEE 126 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 NL+ I V LA + + + + +IK T+ Sbjct: 127 KFKNLVTGLAKGSEILPVPCEGLAKLIDSDRWEDAWDFLDSKIK---------LVKSETE 177 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 +IVL CTHY + + P + D + + L + + L + Sbjct: 178 IIVLGCTHYVFLRERIQYHYP-NIKVYDGNLGTTLHIKNKLHLPDGSKENKNQLDILLNT 236 Query: 254 GKPD 257 D Sbjct: 237 SDSD 240 >gi|167036404|ref|YP_001671635.1| glutamate racemase [Pseudomonas putida GB-1] gi|166862892|gb|ABZ01300.1| Glutamate racemase [Pseudomonas putida GB-1] Length = 296 Score = 197 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 120/258 (46%), Gaps = 2/258 (0%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I++ DSG+GGL + +++ L+PE +YV D+ FPYG+ + +R+ L + Sbjct: 30 AKRPIVVLDSGVGGLTLSRQLELLLPEASILYVVDNEWFPYGSKSGAEISQRVQHLIDQL 89 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + +P+ V+ACNTA +KD + FL P +++A + I +L+TP T Sbjct: 90 YTQIRPLAIVVACNTASVAMKDYGLDSCVQHCFL-ITPPLEEAVEISDQKNIVLLATPGT 148 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ Y + ++ +I +++ L + E G K ++ K+ Sbjct: 149 VKSRYIRRAMAITRNRANIWPIAAQPLVALSEARLAGQVASFASFTKLVDDHLTTKQRFS 208 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 D ++L CTH+P ++ + P +WLD + +A R + + + ++ +F Sbjct: 209 IDTVILGCTHFPHVIKDLEGIFPSVQNWLDPAKKVALRVASTVKKKHASISQPLKA-VIF 267 Query: 252 LSGKPDIAMRRLMQGFGL 269 S + I R++ G Sbjct: 268 TSKQDIIGYRKVFSKNGF 285 >gi|197693554|gb|ACH71446.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 VI+L CTH+PLI Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195 >gi|189501895|ref|YP_001957612.1| hypothetical protein Aasi_0473 [Candidatus Amoebophilus asiaticus 5a2] gi|189497336|gb|ACE05883.1| hypothetical protein Aasi_0473 [Candidatus Amoebophilus asiaticus 5a2] Length = 260 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 105/260 (40%), Gaps = 12/260 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + N I IFDSG+GGL V + ++ L+P Y+ D PYG ++ + + D+ Sbjct: 1 MHNPIGIFDSGVGGLTVARAIKDLLPNESLYYIGDTANLPYGEKSTEQIQAYVKEI-GDV 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAV-PAIKQAAAYTQSGLISILSTP 129 L K + VIAC+TA + L+ + L + P I + + ++ T Sbjct: 60 LLKQGCKVIVIACSTATAAAAEVLKDYIGDHIPVLNVIDPVIAYVRQHYMGKTLGLIGTQ 119 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ T + + + ++ +++ +L +E + K ++G E Sbjct: 120 YTVNTTTYVQKLEASQANINLKCLATPLLVPMIE--------ADQYEKAILQGYLSEPIL 171 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 ++L CTHY LI ++ ++ + +A + +L N + + Sbjct: 172 TDIKGLILGCTHYWLIKEQIIDYYQAKIEIINGAQLLAIHLQKMLLDRNINNSMSNSSKD 231 Query: 250 LFLSGKPDIAMRRLMQG-FG 268 F + K + + + FG Sbjct: 232 YFTATKHTVGFESVTKRVFG 251 >gi|85711145|ref|ZP_01042205.1| glutamate racemase [Idiomarina baltica OS145] gi|85695058|gb|EAQ32996.1| glutamate racemase [Idiomarina baltica OS145] Length = 248 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 102/258 (39%), Gaps = 18/258 (6%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL V + ++ +Y D PYG+ + + + + + + + Sbjct: 4 GVFDSGVGGLTVARSLQRSRYFSELLYFGDTARVPYGSKDSNTVTRYALEAV-EFFNGTD 62 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGA----VPAIKQAAAYTQSGLISILSTPATL 132 ++ACNT + + ++ F + G V A++QA + +++T +T+ Sbjct: 63 VDALIVACNTVSVVALETMQ-KFSNKPVYGVLEPGVMALEQATEVNHDSQVLVIATRSTI 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + I + H +++ + VEE I +R Sbjct: 122 QSGEYQRRIKQLGFE-HATAMATPLFVPIVEEELYEGAILHATFDHYFSAL------ERP 174 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV++L CTH+PLI + + + +++ + L ++ + + Sbjct: 175 DVVLLGCTHFPLISDAISEYF-SGAKTIHSGEAM---VQWLSQHLDLKRQFDETPITIHA 230 Query: 253 SGKPDIAMRRLMQGFGLK 270 S + A+RR+ + + L Sbjct: 231 SENVE-AVRRVAKRWQLN 247 >gi|197693582|gb|ACH71460.1| glutamate racemase [Helicobacter pylori] gi|197693602|gb|ACH71470.1| glutamate racemase [Helicobacter pylori] gi|197693604|gb|ACH71471.1| glutamate racemase [Helicobacter pylori] gi|197693618|gb|ACH71478.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDETIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNT L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTVSALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILESELLETCMRYYFTPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 +VI+L CTH+PLI Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195 >gi|197693792|gb|ACH71565.1| glutamate racemase [Helicobacter pylori] Length = 203 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 11/201 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 + L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+ Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + N + ++ +++ + +EE I E E+ + + Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFAPLKILP 174 Query: 193 DVIVLACTHYPLIVHVFRQLS 213 VI+L CTH+PLI Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195 >gi|15639397|ref|NP_218846.1| glutamate racemase (murI) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025639|ref|YP_001933411.1| glutamate racemase [Treponema pallidum subsp. pallidum SS14] gi|11386905|sp|O83421|MURI_TREPA RecName: Full=Glutamate racemase gi|229486284|sp|B2S303|MURI_TREPS RecName: Full=Glutamate racemase gi|3322687|gb|AAC65392.1| glutamate racemase (murI) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018214|gb|ACD70832.1| glutamate racemase [Treponema pallidum subsp. pallidum SS14] Length = 268 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 11/258 (4%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 DSGIGGL +R +PE +YVAD V FPYGN + R + + + Sbjct: 11 AFLDSGIGGLPYAHALRVRVPEASLVYVADRVYFPYGNKSSAQIIARASAVLQKVQTNFS 70 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 P + V+ACN+ + LR+ VPAIKQA A + I +L+T T+ Y Sbjct: 71 PHIVVLACNSMSVNALEFLRAQVSVPVVG-VVPAIKQAVACSHKKHIGVLATQCTITHPY 129 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 T+ L + + C + + L +E I ED ++ + + + DV+V Sbjct: 130 TACLRAQFGAGCVFQMRADARLIECLERGL--IFEVEDMQREAVARSVMPFQEAGVDVLV 187 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 LACTH+ + H+F+ +D+ + + RR L P Q+++ + A +++G Sbjct: 188 LACTHFVHVRHLFQDCVGTSCTVVDSLEGVVRRTLRLCP----PQSQLRGNAACYVTGAR 243 Query: 257 DIA----MRRLMQGFGLK 270 D R Q FGL+ Sbjct: 244 DAVCAARYARYAQHFGLR 261 >gi|91202612|emb|CAJ72251.1| similar to glutamate racemase [Candidatus Kuenenia stuttgartiensis] Length = 266 Score = 195 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 121/263 (46%), Gaps = 11/263 (4%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + + I IFDSG+G L +++++R +P ++IY+AD FPYG L + + Sbjct: 3 IDDPIAIFDSGVGSLSIIKEIRNSLPGENYIYLADKKHFPYGKKTHDELLLIIRNTIEYL 62 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + P L V+A NT + EL+ ++ +G P + +A + +++G I+IL+T T Sbjct: 63 SKNFTPKLIVLASNTPSIQVLHELKK--GAVDVIGVFPPVNEAVSVSKTGHIAILATQNT 120 Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEK 187 + + IHS + I ++ + VE ++ + I +E+ +E+ Sbjct: 121 ILSSELDEYIHSQEMPASAKIIKWNASRMVDLVETGDFLSNKEKSLRIISEEL--SLLEE 178 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 D I L+ TH P + F L + +D + +A + + LL R N T Sbjct: 179 TDNMVDTITLSSTHLPFLNEYF-TLLRPCLHLIDPAKIVAGKVKSLLER-NLRTTSQKGT 236 Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270 + + + ++ +++ G++ Sbjct: 237 LEILATQGKE-SLETIIKRLGIQ 258 >gi|325479835|gb|EGC82920.1| glutamate racemase [Anaerococcus prevotii ACS-065-V-Col13] Length = 249 Score = 195 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 13/219 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+GGL VL+++ + + Y D + PYG E + + D L+ Y Sbjct: 4 IGIFDSGLGGLTVLRELIKTN-KASYFYFGDTLRVPYGGREKEEIISFAEDIV-DYLENY 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 +IACNT L D L+ + + A G +L T T+ Sbjct: 62 NIDYYIIACNTISVLATDILKEKYNKDFIPITDMGLRASLACD----GDFLVLGTKTTVN 117 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + N I ++ V++ L +E + E+ +K ++ K+ Sbjct: 118 SHFYKNNIEKL-KDAKVYEVAATKLVDLIESG----TLDEENLKFYLDDYLQIANEKKIP 172 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 I+LACTHYP+I + + + +D + ++ + Sbjct: 173 NIILACTHYPIIRDSIEKRLTYKANIIDPASYASKFLKS 211 >gi|260221040|emb|CBA29208.1| hypothetical protein Csp_A10990 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 147 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 47/141 (33%), Positives = 72/141 (51%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K I +FDSG+GGL VL+ +R +P F+YVAD PYG +D L +R + Sbjct: 1 MSKLSNCPIGVFDSGVGGLSVLRALRAELPHEKFVYVADSGHAPYGERDDDYLIERSHTI 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 D++Q V+ACNTA LR P + +G PA+K A +++ +I +++ Sbjct: 61 VRWFRDRHQIKALVVACNTATAAAIHVLREAHPELPIIGIEPALKPAVVQSKTKVIGVMA 120 Query: 128 TPATLRRTYTSNLIHSYVSQC 148 T +TL L+ S +Q Sbjct: 121 TRSTLNSEKFKRLLTSLENQA 141 >gi|153847805|ref|ZP_01993956.1| glutamate racemase [Vibrio parahaemolyticus AQ3810] gi|149744710|gb|EDM56178.1| glutamate racemase [Vibrio parahaemolyticus AQ3810] Length = 214 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 2/171 (1%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++ Sbjct: 40 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 99 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+ Sbjct: 100 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 157 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 R YT LI + + L+ S L EE G + DE+K + Sbjct: 158 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKSILSPL 208 >gi|293596521|ref|ZP_06684239.1| glutamate racemase [Listeria monocytogenes J2818] gi|293589867|gb|EFF98201.1| glutamate racemase [Listeria monocytogenes J2818] Length = 176 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 3/145 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 +D+ + VIACNTA ++R + +G + P + A T++ I +L T Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSS 155 T+ + + + ++ Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLAC 143 >gi|157363388|ref|YP_001470155.1| glutamate racemase [Thermotoga lettingae TMO] gi|157313992|gb|ABV33091.1| glutamate racemase [Thermotoga lettingae TMO] Length = 278 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 19/251 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGG VLQK+ MP ++YVAD + PYG + +R+ + + L Sbjct: 3 IGVFDSGIGGFTVLQKLVEYMPHNEYVYVADTLYAPYGTKTHQQIFERVTRIIN-FLALQ 61 Query: 76 QPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V ACNTA ++ L + P + G + ++ + I + +T T++ Sbjct: 62 GADCIVAACNTADAVLKLSSLSARIP--PYFGILD---FDINFSSAQCIGVAATELTIKS 116 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 L+ + I L +E + + EIK+ CF K D+ Sbjct: 117 GIYEKLLLNR-GISKIIQRPCQKLVELIENNEVHGRQADIEIKE----CFEPF--KNADL 169 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 ++L CTH PL++ + + P + + D ++S+ + L R + ++ + F++ Sbjct: 170 VILGCTHLPLLIEKIQTIFP-KLRFYDPAESLVKNI-WLSCRQD---GKIIGKISFFVTQ 224 Query: 255 KPDIAMRRLMQ 265 P ++ + Sbjct: 225 DPLSFHTKISK 235 >gi|326795261|ref|YP_004313081.1| glutamate racemase [Marinomonas mediterranea MMB-1] gi|326546025|gb|ADZ91245.1| Glutamate racemase [Marinomonas mediterranea MMB-1] Length = 276 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 73/226 (32%), Positives = 105/226 (46%), Gaps = 6/226 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ ++ I DSG GGL VL +R PE + Y AD PYG LK RL+ + + Sbjct: 1 MKYNVAIIDSGSGGLSVLNTIRRQSPELNLHYYADSCFSPYGEKSSEFLKSRLVQIGRYL 60 Query: 72 LD-KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 V+ACNTA D LR S+ +G PA+K A +S+L+TP Sbjct: 61 EALSEPVHAIVLACNTATVEGIDALRRAV-SIPVVGVEPAVKPALVNPNVSRVSVLATPV 119 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ LI + + + L+SS LA ++ E + KEIE E Sbjct: 120 TIGSNRLQALISLWKNDKQVQLISSADLARLIDSADSR---SESALCKEIERICSEVTVF 176 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 R DV+VLACTHYPL+ F V+ L+ S S++ + L + Sbjct: 177 RPDVLVLACTHYPLVRDRFEGSL-HGVEILEPSSSVSNQLIRRLEQ 221 >gi|257066004|ref|YP_003152260.1| glutamate racemase [Anaerococcus prevotii DSM 20548] gi|256797884|gb|ACV28539.1| glutamate racemase [Anaerococcus prevotii DSM 20548] Length = 250 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 13/210 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++ + + Y D + PYG + L++ + D L+K+ Sbjct: 4 IGVFDSGLGGLTVLRELAKTN-KSQYFYFGDSLRVPYGGRSEEELRRFSADIV-DFLEKF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133 VIACNT + D LR + +P + A ++ G +L T T+ Sbjct: 62 DIDYYVIACNTLSVTVTDFLREKYDKKF----IPITELALKASEKYQGKFLVLGTKTTIN 117 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 + N + + ++ V++ L +E K + ++ + I+ K+ + Sbjct: 118 SHFYKNNLEK-NPRNTVYEVAASKLVDLIEA----DKKDDKKLNEYIDSYIKIANDKKIE 172 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 I+LACTHYP+I + + + +D + Sbjct: 173 NILLACTHYPIIRENIERRLDYKANIIDPA 202 >gi|167741431|ref|ZP_02414205.1| glutamate racemase [Burkholderia pseudomallei 14] Length = 171 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 4/172 (2%) Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58 M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60 Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +R + + ++ + L V+ACNTA +R P + +G P IK AA ++ Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 ++ + +L+T ATLR L+ + + C L +E G Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSP 170 >gi|32490882|ref|NP_871136.1| hypothetical protein WGLp133 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|81741819|sp|Q8D368|MURI_WIGBR RecName: Full=Glutamate racemase gi|25166088|dbj|BAC24279.1| murI [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 268 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 123/257 (47%), Gaps = 6/257 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 ILIFDSGIGGL ++R +P ++IYV D+ GFPYGN + + R+ + + + Y Sbjct: 7 ILIFDSGIGGLYFYSEIRKYIPHANYIYVLDNEGFPYGNKYKNFIFDRVTNIIIYMHNLY 66 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L+++ACNTA ++ L+ F S +G P I ++ T++ +I +L+T T+ Sbjct: 67 KFDLTIVACNTASSIALSYLKKFFIS-PVIGIKPDINESVNITKNNIIGLLATKITINYV 125 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 ++ +++ + + + L EE G I ++IK ++ + K D I Sbjct: 126 LSNFFNFKSLNKIKLITLDANELIKLSEEKMRGKIIHLNKIKNILKPILLNKNI--PDTI 183 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +L CTH + F+++ P ++D+ + + +L N + ++ + Sbjct: 184 ILGCTHLLFFYYEFKKIFPIGTKFIDSKKILLNK-SIMLISENYIKKNKIKHQTVYYTKN 242 Query: 256 PDIAMR--RLMQGFGLK 270 + L+ +G K Sbjct: 243 NRYFKKICPLLNKYGFK 259 >gi|194477143|ref|YP_002049322.1| Glutamate racemase [Paulinella chromatophora] gi|171192150|gb|ACB43112.1| Glutamate racemase [Paulinella chromatophora] Length = 272 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 15/253 (5%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 +FDSG+GGL VL ++ P + +IY+ D PYG ++ S L Q Sbjct: 7 GLFDSGVGGLTVLHQVLKRHPNHSYIYLGDTARVPYGERNPREIRSIAGEAIS-WLRNQQ 65 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 ++ACNT L D + + G + AA ++ + +LST AT Sbjct: 66 VDALIMACNTTNALAYD-IALKISGVPVYGLID---SAARCIRAKRVGVLSTAATAASRA 121 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 + IH Y SQ + + +E ++ ++ ++I+ Sbjct: 122 YTLQIHRYSSQTQVIEQACPAFVPLIEIG----NFQDPRLRIAANLYLAPLLAANVEIIM 177 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP------RINTHQTRVFDDHAL 250 L CTHYPL+ + RQL P + LD + ++++R LL + + ++ Sbjct: 178 LGCTHYPLLEPLLRQLLPSHIQLLDPARALSKRLDQLLGIPKRTVHNSINSSKDLAVCRF 237 Query: 251 FLSGKPDIAMRRL 263 ++ + + Sbjct: 238 CVTAASETFAKAA 250 >gi|313892611|ref|ZP_07826198.1| putative glutamate racemase [Dialister microaerophilus UPII 345-E] gi|313119008|gb|EFR42213.1| putative glutamate racemase [Dialister microaerophilus UPII 345-E] Length = 257 Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 111/270 (41%), Gaps = 29/270 (10%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL V + +R PE I++ D PYG H + Sbjct: 1 MDNRP--------IGIMDSGVGGLTVARVLRQKYPEESIIFIGDTANNPYGERTSHEI-N 51 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAF-TLIKDELRSTFPSMAFLGA---VPAIKQAAAYT 118 L L + +IACNT + K+ + G +P + A Sbjct: 52 VLAGKMKKFLISKNVKMIIIACNTITFNVQKNFYDEK---IPIEGMSLDLPHFENA---- 104 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 G I++ +TPAT+ N I I + LA +EE KI E +KK Sbjct: 105 --GSITVFATPATINLHIHKNKIKEKFPNSKIEEMPCEGLAHAIEENNSREKITE-ILKK 161 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 IE +++ TD+ + ACTHYPL+ VF+++ + D ++S + Sbjct: 162 IIE----KRKISPTDIGIFACTHYPLVEDVFKKIW-NKTKFWDPAESTVEN-SMKKLKKE 215 Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 ++ + + + + + A + + FG Sbjct: 216 NKKSESYTEDLFYFTENAERAEILVKKFFG 245 >gi|195937619|ref|ZP_03083001.1| glutamate racemase [Escherichia coli O157:H7 str. EC4024] Length = 143 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 91/143 (63%), Gaps = 1/143 (0%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120 Query: 137 TSNLIHSYVSQCHIHLVSSMILA 159 T LI + ++C I ++ S + Sbjct: 121 THELIARFANECQIEMLGSAEMV 143 >gi|138999530|dbj|BAF51348.1| glutamate recemase [Streptococcus mutans] gi|138999536|dbj|BAF51349.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 188 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K + Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKK-VKMI 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118 Query: 140 LIHSYVSQCHIHLVSSMILASRV 162 I Q + ++ V Sbjct: 119 KIRDLSPQMKVRSLACPKFVPIV 141 >gi|329121243|ref|ZP_08249870.1| glutamate racemase [Dialister micraerophilus DSM 19965] gi|327470177|gb|EGF15640.1| glutamate racemase [Dialister micraerophilus DSM 19965] Length = 257 Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 29/270 (10%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL V + +R PE I++ D PYG H + Sbjct: 1 MDNRP--------IGIMDSGVGGLTVARVLRQKYPEESIIFIGDTANNPYGERTSHEI-N 51 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAF-TLIKDELRSTFPSMAFLGA---VPAIKQAAAYT 118 L L + +IACNT + K+ + G +P + A Sbjct: 52 VLAGKMKKFLISKNVKMIIIACNTITFNVQKNFYDEK---IPIEGMSLDLPHFENA---- 104 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 G I++ +TPAT+ N I I + LA +EE KI E +KK Sbjct: 105 --GSITVFATPATINLHIHKNKIKEKFPNSKIEEMPCEGLAHAIEENNSREKITE-ILKK 161 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 IE +++ TD+ + ACTHYPL+ VF+++ ++ D ++S + Sbjct: 162 IIE----KRKISPTDIGIFACTHYPLVEDVFKKIW-NKTEFWDPAESTVEN-SMKKLKKE 215 Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 ++ + + + + + A + + FG Sbjct: 216 NKKSESYTEDLFYFTENAERAEILVKKFFG 245 >gi|167043360|gb|ABZ08063.1| putative Asp/Glu/hydantoin racemase [uncultured marine crenarchaeote HF4000_ANIW141O9] Length = 253 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 20/259 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG G L +++ ++ + + +Y AD FPYG L K + + + +K+ Sbjct: 4 IAVFDSGFGSLSIIKPIQQAI-KSDIVYFADQKNFPYGKKSKSELTKIITKTVNMLEEKF 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P L VI NT L+ + +P IK+AA + +G ++IL+T A +R Sbjct: 63 EPDLIVIGSNTPSLLV------EINKKNIVKVLPPIKKAAKISMTGNVAILATLALIRSK 116 Query: 136 YTSNLIHSYVSQCHIHL--VSSMILASRVEEY--ACGIKIKEDEIKKEIEGCFIEKEGKR 191 S + H++L + + L VEE K+ E ++K + F++ Sbjct: 117 KLSEYVRKSRLPKHVNLKRIDATQLVRLVEEGKFLDNRKLCEKTVRKVLSKPFLK---SN 173 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV +L+ TH P ++ ++ P + ++D ++ IA++ R ++ + + + +F Sbjct: 174 VDVAILSSTHLPFLLPFLKKQFP-NITFVDPANEIAQKVRKIVAK----KPSKTNTMKIF 228 Query: 252 LSGKPDIAMRRLMQGFGLK 270 S P R L Q G+K Sbjct: 229 TSSDPKKFQRYLWQ-IGIK 246 >gi|332653705|ref|ZP_08419449.1| glutamate racemase [Ruminococcaceae bacterium D16] gi|332516791|gb|EGJ46396.1| glutamate racemase [Ruminococcaceae bacterium D16] Length = 278 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 10/246 (4%) Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85 V +++R +P + +Y D PYGN + ++ + + L V ACN Sbjct: 18 FSVARRVRRQLPNENILYFGDGGNNPYGNHTAEEILSLTRYMLDFMRQRQVKALLV-ACN 76 Query: 86 TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145 T LI + R L V A ++AA+ + ++ST T LI Sbjct: 77 TISCLIDEYRREM--DCPVLSVVQAGAESAAHRPEKRVGVISTCFTASTGCYPALIAQLA 134 Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 + + LA+ VE A +I E E+++ ++G + + + +LACTHYPL+ Sbjct: 135 PEKKVFSRGYKNLAAMVEHGASQQEIDE-ELRENLDGLVHQ---DQVECCLLACTHYPLV 190 Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLSGKPDIAMRRLM 264 R+L P + +D +D +AR L R ++ + P + R Sbjct: 191 EENIRRLYP-QLQLVDPADRMARELERCLKETRQISRRSEPGTLEIYTTADPQEYI-RAA 248 Query: 265 QGFGLK 270 + GL+ Sbjct: 249 RRAGLE 254 >gi|138998500|dbj|BAF51362.1| glutamate recemase [Streptococcus mutans] gi|138998505|dbj|BAF51363.1| glutamate recemase [Streptococcus mutans] gi|138998507|dbj|BAF51364.1| glutamate recemase [Streptococcus mutans] gi|138998509|dbj|BAF51365.1| glutamate recemase [Streptococcus mutans] gi|138998515|dbj|BAF51366.1| glutamate recemase [Streptococcus mutans] gi|138998517|dbj|BAF51367.1| glutamate recemase [Streptococcus mutans] gi|138998519|dbj|BAF51368.1| glutamate recemase [Streptococcus mutans] gi|138998522|dbj|BAF51369.1| glutamate recemase [Streptococcus mutans] gi|138998524|dbj|BAF51370.1| glutamate recemase [Streptococcus mutans] gi|138998529|dbj|BAF51371.1| glutamate recemase [Streptococcus mutans] gi|138998531|dbj|BAF51372.1| glutamate recemase [Streptococcus mutans] gi|138998533|dbj|BAF51373.1| glutamate recemase [Streptococcus mutans] gi|138998536|dbj|BAF51374.1| glutamate recemase [Streptococcus mutans] gi|138998538|dbj|BAF51375.1| glutamate recemase [Streptococcus mutans] gi|138998545|dbj|BAF51376.1| glutamate recemase [Streptococcus mutans] gi|138998547|dbj|BAF51377.1| glutamate recemase [Streptococcus mutans] gi|138998549|dbj|BAF51378.1| glutamate recemase [Streptococcus mutans] gi|138998551|dbj|BAF51379.1| glutamate recemase [Streptococcus mutans] gi|138998557|dbj|BAF51380.1| glutamate recemase [Streptococcus mutans] gi|138998559|dbj|BAF51381.1| glutamate recemase [Streptococcus mutans] gi|138998565|dbj|BAF51382.1| glutamate recemase [Streptococcus mutans] gi|138998567|dbj|BAF51383.1| glutamate recemase [Streptococcus mutans] gi|138998573|dbj|BAF51384.1| glutamate recemase [Streptococcus mutans] gi|138998575|dbj|BAF51385.1| glutamate recemase [Streptococcus mutans] gi|138998579|dbj|BAF51386.1| glutamate recemase [Streptococcus mutans] gi|138998581|dbj|BAF51387.1| glutamate recemase [Streptococcus mutans] gi|138998586|dbj|BAF51388.1| glutamate recemase [Streptococcus mutans] gi|138998588|dbj|BAF51389.1| glutamate recemase [Streptococcus mutans] gi|138998590|dbj|BAF51390.1| glutamate recemase [Streptococcus mutans] gi|138998596|dbj|BAF51391.1| glutamate recemase [Streptococcus mutans] gi|138998599|dbj|BAF51392.1| glutamate recemase [Streptococcus mutans] gi|138998601|dbj|BAF51393.1| glutamate recemase [Streptococcus mutans] gi|138998608|dbj|BAF51394.1| glutamate recemase [Streptococcus mutans] gi|138998610|dbj|BAF51395.1| glutamate recemase [Streptococcus mutans] gi|138998612|dbj|BAF51396.1| glutamate recemase [Streptococcus mutans] gi|138998618|dbj|BAF51397.1| glutamate recemase [Streptococcus mutans] gi|138998620|dbj|BAF51398.1| glutamate recemase [Streptococcus mutans] gi|138998627|dbj|BAF51399.1| glutamate recemase [Streptococcus mutans] gi|138998629|dbj|BAF51400.1| glutamate recemase [Streptococcus mutans] gi|138998631|dbj|BAF51401.1| glutamate recemase [Streptococcus mutans] gi|138998636|dbj|BAF51402.1| glutamate recemase [Streptococcus mutans] gi|138998638|dbj|BAF51403.1| glutamate recemase [Streptococcus mutans] gi|138998640|dbj|BAF51404.1| glutamate recemase [Streptococcus mutans] gi|138998647|dbj|BAF51405.1| glutamate recemase [Streptococcus mutans] gi|138998649|dbj|BAF51406.1| glutamate recemase [Streptococcus mutans] gi|138998654|dbj|BAF51407.1| glutamate recemase [Streptococcus mutans] gi|138998656|dbj|BAF51408.1| glutamate recemase [Streptococcus mutans] gi|138998662|dbj|BAF51409.1| glutamate recemase [Streptococcus mutans] gi|138998664|dbj|BAF51410.1| glutamate recemase [Streptococcus mutans] gi|138998667|dbj|BAF51411.1| glutamate recemase [Streptococcus mutans] gi|138998672|dbj|BAF51412.1| glutamate recemase [Streptococcus mutans] gi|138998678|dbj|BAF51413.1| glutamate recemase [Streptococcus mutans] gi|138998680|dbj|BAF51414.1| glutamate recemase [Streptococcus mutans] gi|138998685|dbj|BAF51415.1| glutamate recemase [Streptococcus mutans] gi|138998690|dbj|BAF51416.1| glutamate recemase [Streptococcus mutans] gi|138998697|dbj|BAF51417.1| glutamate recemase [Streptococcus mutans NN2025] gi|138998699|dbj|BAF51418.1| glutamate recemase [Streptococcus mutans] gi|138998701|dbj|BAF51419.1| glutamate recemase [Streptococcus mutans] gi|138998704|dbj|BAF51420.1| glutamate recemase [Streptococcus mutans] gi|138998706|dbj|BAF51421.1| glutamate recemase [Streptococcus mutans] gi|138998712|dbj|BAF51422.1| glutamate recemase [Streptococcus mutans] gi|138998714|dbj|BAF51423.1| glutamate recemase [Streptococcus mutans] gi|138998718|dbj|BAF51424.1| glutamate recemase [Streptococcus mutans] gi|138998720|dbj|BAF51425.1| glutamate recemase [Streptococcus mutans] gi|138998726|dbj|BAF51426.1| glutamate recemase [Streptococcus mutans] gi|138998734|dbj|BAF51427.1| glutamate recemase [Streptococcus mutans] gi|138998769|dbj|BAF51437.1| glutamate recemase [Streptococcus mutans] gi|138998771|dbj|BAF51438.1| glutamate recemase [Streptococcus mutans] gi|138998776|dbj|BAF51439.1| glutamate recemase [Streptococcus mutans] gi|138998779|dbj|BAF51440.1| glutamate recemase [Streptococcus mutans] gi|138998781|dbj|BAF51441.1| glutamate recemase [Streptococcus mutans] gi|138998787|dbj|BAF51442.1| glutamate recemase [Streptococcus mutans] gi|138998792|dbj|BAF51443.1| glutamate recemase [Streptococcus mutans] gi|138998794|dbj|BAF51444.1| glutamate recemase [Streptococcus mutans] gi|138998797|dbj|BAF51445.1| glutamate recemase [Streptococcus mutans] gi|138998799|dbj|BAF51446.1| glutamate recemase [Streptococcus mutans] gi|138998803|dbj|BAF51447.1| glutamate recemase [Streptococcus mutans] gi|138998805|dbj|BAF51448.1| glutamate recemase [Streptococcus mutans] gi|138999538|dbj|BAF51350.1| glutamate recemase [Streptococcus mutans] gi|138999544|dbj|BAF51351.1| glutamate recemase [Streptococcus mutans] gi|138999546|dbj|BAF51352.1| glutamate recemase [Streptococcus mutans] gi|138999550|dbj|BAF51353.1| glutamate recemase [Streptococcus mutans] gi|138999552|dbj|BAF51354.1| glutamate recemase [Streptococcus mutans] gi|138999554|dbj|BAF51355.1| glutamate recemase [Streptococcus mutans] gi|138999559|dbj|BAF51356.1| glutamate recemase [Streptococcus mutans] gi|138999565|dbj|BAF51357.1| glutamate recemase [Streptococcus mutans] gi|138999567|dbj|BAF51358.1| glutamate recemase [Streptococcus mutans] gi|138999574|dbj|BAF51359.1| glutamate recemase [Streptococcus mutans] gi|138999576|dbj|BAF51360.1| glutamate recemase [Streptococcus mutans] gi|138999578|dbj|BAF51361.1| glutamate recemase [Streptococcus mutans] gi|195536350|dbj|BAG67898.1| glutamate recemase [Streptococcus mutans] gi|195536352|dbj|BAG67899.1| glutamate recemase [Streptococcus mutans] gi|195536354|dbj|BAG67900.1| glutamate recemase [Streptococcus mutans] gi|195536356|dbj|BAG67901.1| glutamate recemase [Streptococcus mutans] gi|195536358|dbj|BAG67902.1| glutamate recemase [Streptococcus mutans] gi|195536360|dbj|BAG67903.1| glutamate recemase [Streptococcus mutans] gi|195536362|dbj|BAG67904.1| glutamate recemase [Streptococcus mutans] gi|195536364|dbj|BAG67905.1| glutamate recemase [Streptococcus mutans] gi|195536366|dbj|BAG67906.1| glutamate recemase [Streptococcus mutans] gi|195536368|dbj|BAG67907.1| glutamate recemase [Streptococcus mutans] gi|195536370|dbj|BAG67908.1| glutamate recemase [Streptococcus mutans] gi|195536372|dbj|BAG67909.1| glutamate recemase [Streptococcus mutans] gi|195536374|dbj|BAG67910.1| glutamate recemase [Streptococcus mutans] gi|195536376|dbj|BAG67911.1| glutamate recemase [Streptococcus mutans] gi|195536378|dbj|BAG67912.1| glutamate recemase [Streptococcus mutans] gi|195536380|dbj|BAG67913.1| glutamate recemase [Streptococcus mutans] gi|195536382|dbj|BAG67914.1| glutamate recemase [Streptococcus mutans] gi|195536384|dbj|BAG67915.1| glutamate recemase [Streptococcus mutans] gi|195536386|dbj|BAG67916.1| glutamate recemase [Streptococcus mutans] gi|195536388|dbj|BAG67917.1| glutamate recemase [Streptococcus mutans] gi|195536390|dbj|BAG67918.1| glutamate recemase [Streptococcus mutans] gi|195536392|dbj|BAG67919.1| glutamate recemase [Streptococcus mutans] gi|195536394|dbj|BAG67920.1| glutamate recemase [Streptococcus mutans] gi|195536396|dbj|BAG67921.1| glutamate recemase [Streptococcus mutans] gi|195536398|dbj|BAG67922.1| glutamate recemase [Streptococcus mutans] gi|195536400|dbj|BAG67923.1| glutamate recemase [Streptococcus mutans] gi|195536402|dbj|BAG67924.1| glutamate recemase [Streptococcus mutans] gi|195536404|dbj|BAG67925.1| glutamate recemase [Streptococcus mutans] gi|195536406|dbj|BAG67926.1| glutamate recemase [Streptococcus mutans] gi|195536408|dbj|BAG67927.1| glutamate recemase [Streptococcus mutans] gi|195536410|dbj|BAG67928.1| glutamate recemase [Streptococcus mutans] gi|195536412|dbj|BAG67929.1| glutamate recemase [Streptococcus mutans] gi|195536414|dbj|BAG67930.1| glutamate recemase [Streptococcus mutans] gi|195536416|dbj|BAG67931.1| glutamate recemase [Streptococcus mutans] gi|195536418|dbj|BAG67932.1| glutamate recemase [Streptococcus mutans] gi|195536420|dbj|BAG67933.1| glutamate recemase [Streptococcus mutans] gi|195536422|dbj|BAG67934.1| glutamate recemase [Streptococcus mutans] gi|195536424|dbj|BAG67935.1| glutamate recemase [Streptococcus mutans] gi|195536426|dbj|BAG67936.1| glutamate recemase [Streptococcus mutans] gi|195536428|dbj|BAG67937.1| glutamate recemase [Streptococcus mutans] gi|195536430|dbj|BAG67938.1| glutamate recemase [Streptococcus mutans] gi|195536432|dbj|BAG67939.1| glutamate recemase [Streptococcus mutans] gi|195536434|dbj|BAG67940.1| glutamate recemase [Streptococcus mutans] gi|195536436|dbj|BAG67941.1| glutamate recemase [Streptococcus mutans] gi|195536438|dbj|BAG67942.1| glutamate recemase [Streptococcus mutans] gi|195536440|dbj|BAG67943.1| glutamate recemase [Streptococcus mutans] gi|195536442|dbj|BAG67944.1| glutamate recemase [Streptococcus mutans] gi|195536444|dbj|BAG67945.1| glutamate recemase [Streptococcus mutans] gi|195536446|dbj|BAG67946.1| glutamate recemase [Streptococcus mutans] gi|195536448|dbj|BAG67947.1| glutamate recemase [Streptococcus mutans] gi|195536450|dbj|BAG67948.1| glutamate recemase [Streptococcus mutans] gi|195536452|dbj|BAG67949.1| glutamate recemase [Streptococcus mutans] gi|195536454|dbj|BAG67950.1| glutamate recemase [Streptococcus mutans] gi|195536456|dbj|BAG67951.1| glutamate recemase [Streptococcus mutans] gi|195536458|dbj|BAG67952.1| glutamate recemase [Streptococcus mutans] gi|195536460|dbj|BAG67953.1| glutamate recemase [Streptococcus mutans] gi|195536462|dbj|BAG67954.1| glutamate recemase [Streptococcus mutans] gi|195536464|dbj|BAG67955.1| glutamate recemase [Streptococcus mutans] gi|195536466|dbj|BAG67956.1| glutamate recemase [Streptococcus mutans] gi|195536468|dbj|BAG67957.1| glutamate recemase [Streptococcus mutans] gi|195536470|dbj|BAG67958.1| glutamate recemase [Streptococcus mutans] gi|195536472|dbj|BAG67959.1| glutamate recemase [Streptococcus mutans] gi|195536474|dbj|BAG67960.1| glutamate recemase [Streptococcus mutans] gi|195536476|dbj|BAG67961.1| glutamate recemase [Streptococcus mutans] gi|195536478|dbj|BAG67962.1| glutamate recemase [Streptococcus mutans] gi|195536480|dbj|BAG67963.1| glutamate recemase [Streptococcus mutans] gi|195536482|dbj|BAG67964.1| glutamate recemase [Streptococcus mutans] gi|195536484|dbj|BAG67965.1| glutamate recemase [Streptococcus mutans] gi|195536486|dbj|BAG67966.1| glutamate recemase [Streptococcus mutans] gi|195536488|dbj|BAG67967.1| glutamate recemase [Streptococcus mutans] gi|195536490|dbj|BAG67968.1| glutamate recemase [Streptococcus mutans] gi|195536492|dbj|BAG67969.1| glutamate recemase [Streptococcus mutans] gi|195536494|dbj|BAG67970.1| glutamate recemase [Streptococcus mutans] gi|195536496|dbj|BAG67971.1| glutamate recemase [Streptococcus mutans] gi|195536498|dbj|BAG67972.1| glutamate recemase [Streptococcus mutans] gi|195536500|dbj|BAG67973.1| glutamate recemase [Streptococcus mutans] gi|195536502|dbj|BAG67974.1| glutamate recemase [Streptococcus mutans] gi|195536504|dbj|BAG67975.1| glutamate recemase [Streptococcus mutans] gi|195536506|dbj|BAG67976.1| glutamate recemase [Streptococcus mutans] gi|195536508|dbj|BAG67977.1| glutamate recemase [Streptococcus mutans] gi|195536510|dbj|BAG67978.1| glutamate recemase [Streptococcus mutans] gi|195536512|dbj|BAG67979.1| glutamate recemase [Streptococcus mutans] gi|195536514|dbj|BAG67980.1| glutamate recemase [Streptococcus mutans] gi|195536516|dbj|BAG67981.1| glutamate recemase [Streptococcus mutans] gi|195536518|dbj|BAG67982.1| glutamate recemase [Streptococcus mutans] gi|195536520|dbj|BAG67983.1| glutamate recemase [Streptococcus mutans] gi|195536522|dbj|BAG67984.1| glutamate recemase [Streptococcus mutans] gi|195536524|dbj|BAG67985.1| glutamate recemase [Streptococcus mutans] gi|195536526|dbj|BAG67986.1| glutamate recemase [Streptococcus mutans] gi|195536528|dbj|BAG67987.1| glutamate recemase [Streptococcus mutans] gi|195536530|dbj|BAG67988.1| glutamate recemase [Streptococcus mutans] gi|195536532|dbj|BAG67989.1| glutamate recemase [Streptococcus mutans] gi|195536534|dbj|BAG67990.1| glutamate recemase [Streptococcus mutans] gi|195536536|dbj|BAG67991.1| glutamate recemase [Streptococcus mutans] gi|195536538|dbj|BAG67992.1| glutamate recemase [Streptococcus mutans] gi|195536540|dbj|BAG67993.1| glutamate recemase [Streptococcus mutans] gi|195536542|dbj|BAG67994.1| glutamate recemase [Streptococcus mutans] gi|195536544|dbj|BAG67995.1| glutamate recemase [Streptococcus mutans] gi|195536546|dbj|BAG67996.1| glutamate recemase [Streptococcus mutans] gi|195536548|dbj|BAG67997.1| glutamate recemase [Streptococcus mutans] gi|195536550|dbj|BAG67998.1| glutamate recemase [Streptococcus mutans] gi|195536552|dbj|BAG67999.1| glutamate recemase [Streptococcus mutans] gi|195536554|dbj|BAG68000.1| glutamate recemase [Streptococcus mutans] gi|195536556|dbj|BAG68001.1| glutamate recemase [Streptococcus mutans] gi|195536558|dbj|BAG68002.1| glutamate recemase [Streptococcus mutans] gi|195536560|dbj|BAG68003.1| glutamate recemase [Streptococcus mutans] gi|195536562|dbj|BAG68004.1| glutamate recemase [Streptococcus mutans] gi|195536564|dbj|BAG68005.1| glutamate recemase [Streptococcus mutans] gi|195536566|dbj|BAG68006.1| glutamate recemase [Streptococcus mutans] gi|195536568|dbj|BAG68007.1| glutamate recemase [Streptococcus mutans] gi|195536570|dbj|BAG68008.1| glutamate recemase [Streptococcus mutans] gi|195536572|dbj|BAG68009.1| glutamate recemase [Streptococcus mutans] gi|195536574|dbj|BAG68010.1| glutamate recemase [Streptococcus mutans] gi|195536576|dbj|BAG68011.1| glutamate recemase [Streptococcus mutans] gi|195536578|dbj|BAG68012.1| glutamate recemase [Streptococcus mutans] gi|195536580|dbj|BAG68013.1| glutamate recemase [Streptococcus mutans] gi|195536582|dbj|BAG68014.1| glutamate recemase [Streptococcus mutans] gi|195536584|dbj|BAG68015.1| glutamate recemase [Streptococcus mutans] gi|195536586|dbj|BAG68016.1| glutamate recemase [Streptococcus mutans] gi|195536588|dbj|BAG68017.1| glutamate recemase [Streptococcus mutans] gi|195536590|dbj|BAG68018.1| glutamate recemase [Streptococcus mutans] gi|195536592|dbj|BAG68019.1| glutamate recemase [Streptococcus mutans] gi|195536594|dbj|BAG68020.1| glutamate recemase [Streptococcus mutans] gi|195536608|dbj|BAG68027.1| glutamate recemase [Streptococcus mutans] gi|195536610|dbj|BAG68028.1| glutamate recemase [Streptococcus mutans] gi|195536612|dbj|BAG68029.1| glutamate recemase [Streptococcus mutans] gi|195536614|dbj|BAG68030.1| glutamate recemase [Streptococcus mutans] gi|195536616|dbj|BAG68031.1| glutamate recemase [Streptococcus mutans] gi|195536618|dbj|BAG68032.1| glutamate recemase [Streptococcus mutans] gi|195536620|dbj|BAG68033.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K + Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKK-VKMI 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118 Query: 140 LIHSYVSQCHIHLVSSMILASRV 162 I Q + ++ V Sbjct: 119 KILDLSPQMKVRSLACPKFVPIV 141 >gi|195536596|dbj|BAG68021.1| glutamate recemase [Streptococcus mutans] gi|195536598|dbj|BAG68022.1| glutamate recemase [Streptococcus mutans] gi|195536600|dbj|BAG68023.1| glutamate recemase [Streptococcus mutans] gi|195536602|dbj|BAG68024.1| glutamate recemase [Streptococcus mutans] gi|195536604|dbj|BAG68025.1| glutamate recemase [Streptococcus mutans] gi|195536606|dbj|BAG68026.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K + Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKK-VKMI 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAIVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118 Query: 140 LIHSYVSQCHIHLVSSMILASRV 162 I Q + ++ V Sbjct: 119 KILDLSPQMKVRSLACPKFVPIV 141 >gi|138998741|dbj|BAF51429.1| glutamate recemase [Streptococcus mutans] gi|138998743|dbj|BAF51430.1| glutamate recemase [Streptococcus mutans] gi|138998746|dbj|BAF51431.1| glutamate recemase [Streptococcus mutans] gi|138998748|dbj|BAF51432.1| glutamate recemase [Streptococcus mutans] gi|138998750|dbj|BAF51433.1| glutamate recemase [Streptococcus mutans] gi|138998761|dbj|BAF51434.1| glutamate recemase [Streptococcus mutans] gi|138998763|dbj|BAF51435.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K + Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKR-VKMI 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118 Query: 140 LIHSYVSQCHIHLVSSMILASRV 162 I Q + ++ V Sbjct: 119 KILDLSPQMKVRSLACPKFVPIV 141 >gi|207742838|ref|YP_002259230.1| glutamate racemase (n terminal fragment) protein [Ralstonia solanacearum IPO1609] gi|206594232|emb|CAQ61159.1| probable glutamate racemase (n terminal fragment) protein [Ralstonia solanacearum IPO1609] Length = 141 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 2/143 (1%) Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 + Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + + Sbjct: 1 MTARAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRV 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++ + L VIACNTA LR ++ +G P +K A A +QS ++ +L+ Sbjct: 61 CEWLVGQGCKAL-VIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLA 118 Query: 128 TPATLRRTYTSNLIHSYVSQCHI 150 T +TLR + L+ + C + Sbjct: 119 TESTLRSDKFARLLGNVSGDCQV 141 >gi|138998767|dbj|BAF51436.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K + Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKA-KMI 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118 Query: 140 LIHSYVSQCHIHLVSSMILASRV 162 I Q + ++ V Sbjct: 119 KILDLSPQMKVRSLACPKFVPIV 141 >gi|323342863|ref|ZP_08083095.1| glutamate racemase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463975|gb|EFY09169.1| glutamate racemase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 252 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 18/251 (7%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 IFDSG+GG V Q ++ + + AD PYGN D A+ + D + Sbjct: 11 GIFDSGLGGYSVYQYLKQHLDPVSLVLYADQKNAPYGNQSDDAIIAYTLHAMKWFQD-HD 69 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 VIACNT + R+ FP M +G + + I+ST AT Sbjct: 70 IRDVVIACNTVSAVALSTARNHFPDMNLIGIIELTVGQIEPNADTCVGIVSTLATFNAHA 129 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 N IH H+ ++ L + +E +K+ +E TD ++ Sbjct: 130 YRNFIHEKGP-IHVKELALPELVNIIEGLNQNLKLDT-----YLENELKPILES-TD-LI 181 Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 L CTHYPL+ FR++ V D+ R + + + + F +G Sbjct: 182 LGCTHYPLVHDAFRKIYKGQVH--DSR-------RPICEYVAMNYEFLRSSCQTFTTGDA 232 Query: 257 DIAMRRLMQGF 267 R++ + F Sbjct: 233 QKMERQIKRLF 243 >gi|227500398|ref|ZP_03930460.1| possible glutamate racemase [Anaerococcus tetradius ATCC 35098] gi|227217461|gb|EEI82780.1| possible glutamate racemase [Anaerococcus tetradius ATCC 35098] Length = 250 Score = 185 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 9/217 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GGL VL+++ + + Y D + PYG L + D L+K+ Sbjct: 4 IGVFDSGLGGLTVLRELSKTN-KAQYFYFGDTLRVPYGGRSREELIGFACDIV-DFLEKF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIACNT KD L + + + A+ T G +L T T+ Sbjct: 62 DIDYYVIACNTLSVTAKDFLVDKYKKKFI--PITQMGLRASETYGGSFLVLGTKTTINSH 119 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + N + ++ ++ L +E + E++ I+ K I Sbjct: 120 FYKNNLEKIPGNI-VYEKAATKLVDFIESG----NMASSELETYIDSYISLANEKEIANI 174 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 +LACTHYP+I + + +D + A R Sbjct: 175 ILACTHYPIIKSKIENRLTYKANIIDPAIFAADYLRS 211 >gi|138998736|dbj|BAF51428.1| glutamate recemase [Streptococcus mutans] Length = 141 Score = 185 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%) Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 SG+GGL V++++ +P IY+ D PYG +K L + +L K + Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKK-VKMI 59 Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++ Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118 Query: 140 LIHSYVSQCHIHLVSSMILASRV 162 I Q + ++ V Sbjct: 119 KILVLSPQMKVRSLACPKFVPIV 141 >gi|87303353|ref|ZP_01086141.1| Glutamate racemase [Synechococcus sp. WH 5701] gi|87282001|gb|EAQ73963.1| Glutamate racemase [Synechococcus sp. WH 5701] Length = 276 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 92/252 (36%), Gaps = 18/252 (7%) Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86 VL++M P+ F+Y+ D PYG+ + +++ + L + Q ++ACNT Sbjct: 16 TVLRRMLEHHPDLPFVYLGDTARVPYGHRSPNEIRRIAAEVVG-WLREQQVDAVLMACNT 74 Query: 87 AFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145 L D + + G + A+ Q + +L+TPAT + Sbjct: 75 TNALAFDIAEAEAGEGVPVFGLID---CVASQLQCQRVGVLATPATASSGAYGRALRQAD 131 Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 CH+ + +E+ + ++ +R + IVL CTHYPL+ Sbjct: 132 PSCHVIEIGCPAFVPLIEDG----NFADPRLRAAAIAYLEPLLAERVEAIVLGCTHYPLL 187 Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---------ALFLSGKP 256 + R+L P V +D + + + L + +Q H ++G Sbjct: 188 EELLRELLPPEVVLVDPAQAAVAQLGHRLGKSPVYQAPCCGLHPREVPVERGRFCVTGDA 247 Query: 257 DIAMRRLMQGFG 268 + G Sbjct: 248 EAFALAAAPWLG 259 >gi|72162561|ref|YP_290218.1| glutamate racemase [Thermobifida fusca YX] gi|71916293|gb|AAZ56195.1| glutamate racemase [Thermobifida fusca YX] Length = 256 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 11/205 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R + P+ I D P+G + R + +LD+ Sbjct: 3 IALVDSGIGLLSTAAALRRIRPDADLILSMDPDYMPWGPRSVPEIVARALAGARAVLDE- 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 QP V+ACNTA + LR+ P + +G VPA+K AA + +I +TPAT Sbjct: 62 QPDAVVVACNTASVHALESLRAELEPRIPVIGTVPAVKPAAD--RGAPFAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y +LI + + V+ LA VE + E Sbjct: 120 PYQRDLIDRFARGIAVTPVACPGLADAVER-------ADPAAVAEAVDHAAAHTPADVSA 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDW 219 +VL CTHY L+ V V Sbjct: 173 VVLGCTHYDLVSDVITAALGEHVTL 197 >gi|310826435|ref|YP_003958792.1| hypothetical protein ELI_0815 [Eubacterium limosum KIST612] gi|308738169|gb|ADO35829.1| hypothetical protein ELI_0815 [Eubacterium limosum KIST612] Length = 269 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 9/243 (3%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 + I + DSGIGG VL++++ +P + +Y+ D PYG E+ + L Sbjct: 4 SSPIGLIDSGIGGFTVLRELQRQLPRENIVYLGDAKRMPYGERENEEIIAFGNSDI-RFL 62 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + ++ACNT +L + L + P + + G + +++T AT+ Sbjct: 63 ENMGVKAILLACNTISSL-IESLNANVPLFSI--VEAGCLATIERQKEGAVGLIATTATV 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + +++ S+ + LA+ + + + + IK+ I+ F E +R Sbjct: 120 KNGTYEHILSSHTQALRYITQGTRTLANVINNHPGELALLRQNIKEAIDPIF---ERERV 176 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251 ++L CTH+P++ ++ P + +D +D + L + N +D + Sbjct: 177 SALLLGCTHFPIVRKTIEEMYPC-LSIIDPADKQITLLKEYLEKNNAFNESKYDGVTRIC 235 Query: 252 LSG 254 +G Sbjct: 236 ATG 238 >gi|238764511|ref|ZP_04625459.1| Glutamate racemase [Yersinia kristensenii ATCC 33638] gi|238697323|gb|EEP90092.1| Glutamate racemase [Yersinia kristensenii ATCC 33638] Length = 186 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151 LR F +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I Sbjct: 3 LPALRERF-DFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTLDLIERFATDCKIE 61 Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 L+ S L E G + + +KK + +E D IVL CTH+PL+ Q Sbjct: 62 LLGSSELVELAETKLHGGAVPPEALKKILHPWLAMREP--PDTIVLGCTHFPLLSDELAQ 119 Query: 212 LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLK 270 + P +D+ +IARR L+ + ++ A ++ D A+ ++QG+G Sbjct: 120 VLPEGTRMVDSGAAIARRTAWLISSQENVVSSQAENIAYCMALNTDTDALLPVLQGYGFP 179 Query: 271 S 271 + Sbjct: 180 T 180 >gi|284052422|ref|ZP_06382632.1| glutamate racemase [Arthrospira platensis str. Paraca] Length = 214 Score = 183 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 8/192 (4%) Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137 + ++ACNT+ L + +RS F + LG + P + A +Q I +++TPAT Sbjct: 1 MVLMACNTSSALALEVVRSEF-DIPILGLILPGARAAI--SQGERIGVIATPATAASNAY 57 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 I + V +E+ +I + + +R D ++ Sbjct: 58 RQAIQEINPAVQVWQVGCPAFVPLIEQN----RIHDPCTLEAAREYLTPLIQQRIDTLIY 113 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257 CTHYP + V R L P V +D + + L + + +SG + Sbjct: 114 GCTHYPHLAPVLRSLLPAAVKLVDPAVHLVEAVAQELELLGLRHGDLPRPTRFCVSGCAE 173 Query: 258 IAMRRLMQGFGL 269 +Q G Sbjct: 174 QFANLSVQWLGY 185 >gi|213583010|ref|ZP_03364836.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 135 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 87/134 (64%), Gaps = 1/134 (0%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120 Query: 137 TSNLIHSYVSQCHI 150 T LI + ++C I Sbjct: 121 THELIARFANECQI 134 >gi|111023014|ref|YP_705986.1| glutamate racemase [Rhodococcus jostii RHA1] gi|110822544|gb|ABG97828.1| probable glutamate racemase [Rhodococcus jostii RHA1] Length = 257 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 12/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L P+ I D G P+G + + R++ LD+ Sbjct: 3 VALIDSGLGMLPTSAWLRKLRPDLDLILALDPDGAPWGPKPEQWVIDRVLATAQRCLDRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V+ CNTA D +R P++ +G VPAIK AAA +S +++ +T AT Sbjct: 63 A-EVIVLPCNTASVTALDHVREFVGPAVPVVGTVPAIKPAAAACES--VAVWATAATTAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++LI + + + V+ LA ++ +E+ Sbjct: 120 RYQADLIEKFGNGSSVVGVACHGLAEAIDRGERDAATAAIA-------SAVERTPDDVGG 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHYPL+ P V D+++++A + + +N + +FLSG Sbjct: 173 VVLGCTHYPLMADEIAAQLPAGVRLFDSAEAVATQTLRRIDALN-RPSAGEGTVEVFLSG 231 Query: 255 KP 256 +P Sbjct: 232 RP 233 >gi|187917978|ref|YP_001883541.1| glutamate racemase [Borrelia hermsii DAH] gi|119860826|gb|AAX16621.1| glutamate racemase [Borrelia hermsii DAH] Length = 254 Score = 182 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 16/262 (6%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 L++ I+IFDSGIGGL + + +++Y+AD+ FPYG L K ++ L Sbjct: 1 MSNLEDVIVIFDSGIGGLSYFEYISKRFVNRNYVYIADNKNFPYGEKSPEFLLKEILELV 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y VIACNTA + D+L FP + L +V +++ A + +++T Sbjct: 61 LKLEQMYNIASIVIACNTASISVYDKLNLRFPIIYTLPSVGLVEELAC----KRVILIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 +T+ + ++ L S+ L + VE G + KED ++ + +E E Sbjct: 117 SSTINSEFVQRE---KKCHWNLILKSASELVNFVE---YGDRFKEDALR-YLRALQLEVE 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 R D++ L CTHY I + PV +N + +A +L I + Sbjct: 170 ANRRDMVFLGCTHYLHIKDMIESFLGIPV--YENRELVANELAKVLGPIKC--SDNCFIR 225 Query: 249 ALFLSGKPDI-AMRRLMQGFGL 269 +L+ ++ + + +GL Sbjct: 226 YFYLTQDENLCFYKNFCKRYGL 247 >gi|167949668|ref|ZP_02536742.1| glutamate racemase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 275 Score = 181 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 6/199 (3%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 H + +R + ++ + VIACNTA LR ++ +G P +K Sbjct: 2 PKAPHFVAQRAQQITRFLIAQGAKT-IVIACNTATAAAVASLRQQH-TLPIIGMEPGLKP 59 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 A +++G++ IL+T TL +L+ + + + +VE + Sbjct: 60 GIAASRNGVVGILATEGTLGSAKFRDLLRRHGEGARVIIRPCHGWVRQVES----TDLSG 115 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 K + + D +VL CTH+P + RQ+ P +D ++A+ + Sbjct: 116 PRALKVVAEEIQPLIDQGVDSLVLGCTHFPFLHQAIRQMVPAKTHIIDTGPAVAKELKRR 175 Query: 234 LPRINTHQTRVFDDHALFL 252 L + + Sbjct: 176 LVEQGLLRRSTLRGXRCAV 194 >gi|317124440|ref|YP_004098552.1| glutamate racemase [Intrasporangium calvum DSM 43043] gi|315588528|gb|ADU47825.1| glutamate racemase [Intrasporangium calvum DSM 43043] Length = 286 Score = 180 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 111/268 (41%), Gaps = 21/268 (7%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D P + + DSGIG L +R L P+ + D PYG +++ Sbjct: 7 DLAPMTTRPPRRVAFVDSGIGLLGYADALRALRPDLELVLALDPDHMPYGPRSPGEVREL 66 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGL 122 ++ + + +PV V+ACNTA + LR+ P + +G VPAI+ AA T G Sbjct: 67 ILASAAAA-AELEPVALVVACNTASVHGLEALRAELEPGLPVIGTVPAIRPAA--TTGGP 123 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +SI ST AT Y L+ ++ S+ H ++++ LA VE + EI + I Sbjct: 124 VSIWSTAATSSSDYLRGLVDAFASEVETHSIAALGLAEAVEA------VDPAEIDRAIGA 177 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLLPRINT 239 E T +VL CTHY L+ V D+ ++AR+ L RI Sbjct: 178 ALAE-TPADTRALVLGCTHYGLVADRISAALNSRGSEVTIFDSPVAVARQT---LRRIGL 233 Query: 240 HQTRVFDDHA----LFLSGKPDIAMRRL 263 + LSG+ RL Sbjct: 234 EPEEAAVPTRTAPIVLLSGRRGELPERL 261 >gi|160901642|ref|YP_001567223.1| glutamate racemase [Petrotoga mobilis SJ95] gi|160359286|gb|ABX30900.1| glutamate racemase [Petrotoga mobilis SJ95] Length = 263 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 109/262 (41%), Gaps = 24/262 (9%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 M + +P K I +FDSGIGGL VL+K+ + + Y+AD++ PYG+ L Sbjct: 1 MGVRYFPIMK-----IGLFDSGIGGLTVLKKVIENFGNHEYFYLADNLNVPYGSKPIPFL 55 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-- 118 ++ L + S K + + ACNT +++K ++ F + + +I A T Sbjct: 56 RENLKNILSFF-QKMKVDFLISACNTTDSIVK---KTNFDTKNYNFTYVSIIDNAIKTIE 111 Query: 119 QSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 ++ + +L+T T+ LI ++ + + +EE ++ E ++ Sbjct: 112 RNDTVLLLATENTINLGAYKEALISKKITNLE--EKACPLFVPLIEEGYWDGQMAESVLR 169 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 ++ + ++L CTHYP++ R+ + +D +D + + I Sbjct: 170 FYLQDSKSKYHK-----VILGCTHYPILEKQIRKYTNSS--IVDPADGVVDFLKN---EI 219 Query: 238 NTHQTRVFDDHALFLSGKPDIA 259 + ++G + Sbjct: 220 KLERIDGKIKVNFLVTGNLEKF 241 >gi|203284025|ref|YP_002221765.1| glutamate racemase [Borrelia duttonii Ly] gi|201083468|gb|ACH93059.1| glutamate racemase [Borrelia duttonii Ly] Length = 254 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 15/247 (6%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 L++ I+IFDSGIGGL + + + ++IYVAD+ FPYG+ + + + L Sbjct: 1 MNNLEDVIVIFDSGIGGLAYFEYISKKLFNRNYIYVADNKNFPYGDKSSNFILNEFLELI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S + + Y V V+ACNTA + ++L FP + L +V +K+ + +++T Sbjct: 61 SKLREIYNIVSIVVACNTASISVYNKLNFNFPIIYTLPSVSLVKELLC----KRVILIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + L S+ L VE I E + + ++ E + Sbjct: 117 NTTINSEFVKKE---QNNHIDLILKSAGELVKFVEYG----DIFEKDALEYLKSLKFEVQ 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 + D++ L CTHY I + + + DN +A L N + Sbjct: 170 STKRDMVFLGCTHYLHIKDMIESVL--EIPVYDNRKIVADELNKSLK--NVENSDYCFKR 225 Query: 249 ALFLSGK 255 +L+ Sbjct: 226 YFYLTQD 232 >gi|203287567|ref|YP_002222582.1| glutamate racemase [Borrelia recurrentis A1] gi|201084787|gb|ACH94361.1| glutamate racemase [Borrelia recurrentis A1] Length = 254 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 15/247 (6%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 L++ I+IFDSGIGGL + + + ++IYVAD+ FPYG+ + + + L Sbjct: 1 MNNLEDVIVIFDSGIGGLAYFEYISKKLFNRNYIYVADNKNFPYGDKSSNFILNEFLELI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 S + + Y V V+ACNTA + ++L FP + L +V +K+ + +++T Sbjct: 61 SKLREIYNIVSIVVACNTASISVYNKLNFNFPIIYTLPSVSLVKELVF----KRVILIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + L S+ L VE I E + + ++ E + Sbjct: 117 NTTINSEFVKKE---QNNHIDLILKSAGELVKFVEYG----DIFEKDALEYLKSLKFEVQ 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 + D++ L CTHY I + + + DN +A L N + Sbjct: 170 STKRDMVFLGCTHYLHIKDMIESVL--EIPVYDNRKIVADELNKSLK--NVENSDYCFKR 225 Query: 249 ALFLSGK 255 +L+ Sbjct: 226 YFYLTQD 232 >gi|229135328|ref|ZP_04264122.1| Glutamate racemase [Bacillus cereus BDRD-ST196] gi|228648151|gb|EEL04192.1| Glutamate racemase [Bacillus cereus BDRD-ST196] Length = 185 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 71/176 (40%), Gaps = 7/176 (3%) Query: 95 LRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV 153 ++ P + +G + P + A T + + I+ T T++ + S ++ + + Sbjct: 1 MQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIGTVKSGAYEEALKSINNRVMVESL 59 Query: 154 SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 + VE ++ + +++ ++ + D ++L CTHYP++ V +++ Sbjct: 60 ACPPFVELVESGNFESEMAYEVVRETLQ----PLKSTDIDTLILGCTHYPILGPVIKKVM 115 Query: 214 PWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 V + + D AR +L ++ DH +GK + + FG Sbjct: 116 GDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDHLFLTTGKIGLFKEIASKWFG 171 >gi|227486394|ref|ZP_03916710.1| possible glutamate racemase [Anaerococcus lactolyticus ATCC 51172] gi|227235575|gb|EEI85590.1| possible glutamate racemase [Anaerococcus lactolyticus ATCC 51172] Length = 249 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 9/218 (4%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 +I IFDSG+GG+ VL ++ + ++ Y+ D++ PYGN + + + L+ Sbjct: 3 NIGIFDSGLGGIAVLNELAKKN-KANYFYLGDNLRVPYGNRSKAEITSFATDIVN-FLEG 60 Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 Y +IACNT KD LR F A AI+ A Y G L T AT+ Sbjct: 61 YDIDYYIIACNTISVTCKDYLREKFKKKFITIADMAIEAAMEY--DGDYLALGTKATMES 118 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + + C ++ ++ L + +E G ++ + ++ K+ Sbjct: 119 HFYKTTLEAKKP-CKVYESKAIDLVNLIE----GGVLEGATLNGALDEYLSIANEKKLAN 173 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 I+LACTHYP+I + + + +D + +A + Sbjct: 174 IILACTHYPIIKGEISKRLDYKANIIDPAVFLADNIKT 211 >gi|297567944|ref|YP_003686914.1| Glutamate racemase [Meiothermus silvanus DSM 9946] gi|296852393|gb|ADH65406.1| Glutamate racemase [Meiothermus silvanus DSM 9946] Length = 234 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 26/211 (12%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ +FDSG+GGL L+++R L P+ ++Y+AD PYG +++R+ + +L+ Sbjct: 2 TVGVFDSGVGGLAALEELRRLRPDLDYLYLADTAWAPYGPLPPERIRERVEQVGGFLLEA 61 Query: 75 YQPVLSVIACNTAFTL---IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L V+ACNTA + LR+ L A+ +QAA + ++ +T AT Sbjct: 62 GAEAL-VVACNTASAWGAGALEGLRA-----PVLEAIGPTRQAAGREEG--TAVWTTAAT 113 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 R + ++ + +LA VEE +D + + + G ++E+ Sbjct: 114 WRSGVYRGVGE---------VIPTPLLAPLVEEGHL-----DDRVAEAVVGAYLERLPGG 159 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 T +VL CTHY + + +L+P + +D+ Sbjct: 160 TRRLVLGCTHYSFLRPLLSRLAP-GLALVDS 189 >gi|229490649|ref|ZP_04384487.1| glutamate racemase [Rhodococcus erythropolis SK121] gi|229322469|gb|EEN88252.1| glutamate racemase [Rhodococcus erythropolis SK121] Length = 254 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 13/253 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L P+ + D G P+G + + R++ LD+ Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLVLSLDPDGAPWGPKPEPWVVDRVLGAVRRSLDRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V V+ CNTA +R P + +G VPAIK AAA S ++I +T AT Sbjct: 63 AQV-IVLPCNTASVTALPHVRELVGPGVPVIGTVPAIKPAAAACDS--VAIWATAATTAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++LI + + + V LA ++ + I+ + + Sbjct: 120 RYQADLIEQFGNGAKVVGVPCHGLADSIDLGDRAAALA--AIESAVAR-----TPDDVNG 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHYPL+ P V D+++++AR+ + + +F+SG Sbjct: 173 VVLGCTHYPLLADEIAARLPAGVTLFDSAEAVARQTLRRIDGLGD-AGEGSGTVEVFVSG 231 Query: 255 KPDIAMRRLMQGF 267 +P A+ + F Sbjct: 232 RPG-ALPPSAEAF 243 >gi|226305260|ref|YP_002765218.1| glutamate racemase [Rhodococcus erythropolis PR4] gi|226184375|dbj|BAH32479.1| glutamate racemase [Rhodococcus erythropolis PR4] Length = 254 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 13/253 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L P+ + D G P+G + + R++ LD+ Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLVLSLDPDGAPWGPKPEPWVVDRVLGAVRRSLDRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V V+ CNTA +R P + +G VPAIK AAA S ++I +T AT Sbjct: 63 AQV-IVLPCNTASVTALPHVRELVGPEVPVIGTVPAIKPAAAACDS--VAIWATAATTAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++LI + + + V LA ++ + I + Sbjct: 120 RYQADLIEQFGNGAKVVGVPCHGLADSIDLGDRAAALA--AIDSAVAR-----TPDDVSG 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHYPL+ P V D+++++AR+ + + +F+SG Sbjct: 173 VVLGCTHYPLLADEIAARLPAGVTLFDSAEAVARQTLRRIDGLGA-AGEGSGTVEVFVSG 231 Query: 255 KPDIAMRRLMQGF 267 +P A+ + F Sbjct: 232 RPG-ALPPSAEAF 243 >gi|295395118|ref|ZP_06805327.1| glutamate racemase [Brevibacterium mcbrellneri ATCC 49030] gi|294972066|gb|EFG47932.1| glutamate racemase [Brevibacterium mcbrellneri ATCC 49030] Length = 310 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 11/223 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 ++ + DSG+G + + +P + D PYG +++R + ++D Sbjct: 25 PTVGLLDSGLGLVPFAVAVHHELPHANLALAMDPDFAPYGALTSAQIEQRALASARTLVD 84 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 L VIACNTA +R F P + +G VPA+K AAA ++ +T AT Sbjct: 85 AGARAL-VIACNTASVHALSAVRERFEPLVPVIGTVPAVKPAAAT--GAPFAVWATTATT 141 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 Y +LI Y +++ V+ LA ++ + E + + Sbjct: 142 GSAYQRSLISMYAGDINVYPVACAGLAQAIDS-------ADPETIDIALSAAVTATPREA 194 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235 IVL CTHY L+ PV D+ ++AR+ L Sbjct: 195 QSIVLGCTHYGLVADRIEAAFDRPVTLFDSPQAVARQLARRLA 237 >gi|328880727|emb|CCA53966.1| Glutamate racemase [Streptomyces venezuelae ATCC 10712] Length = 264 Score = 175 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 100/249 (40%), Gaps = 18/249 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + D G P+G L R + + + + Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLLLSNDPDGMPWGPRTPEDLTGRALAVALAAAE-H 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA +R+ P +A +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPQALIVACNTATVHALPAIRAALEPDIAVIGTVPAIKPAAAG--GGKVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE + E + Sbjct: 120 AYQRGLIRDFADGAEVTEVPCPGLADAVEH-------ADPEAVDRAVAAAAALTPRDVRT 172 Query: 195 IVLACTHYPLIVHVFRQLSP-------WPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 +VL CTHY L+ P+ + ++D++A +A + Sbjct: 173 VVLGCTHYELVEERILAALDARGRAGLPPIVFHGSADAVAAQALRRVGAEPAPAAAPTGT 232 Query: 248 HALFLSGKP 256 ++ LSG+P Sbjct: 233 LSVLLSGRP 241 >gi|297195902|ref|ZP_06913300.1| glutamate racemase [Streptomyces pristinaespiralis ATCC 25486] gi|297152990|gb|EFH32086.1| glutamate racemase [Streptomyces pristinaespiralis ATCC 25486] Length = 270 Score = 173 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 64/245 (26%), Positives = 98/245 (40%), Gaps = 17/245 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + R + + + Sbjct: 12 IALMDSGIGLLAAAAVVRTLRPDADLVLSSDPGSMPWGPRTPDDVAGRAL-TVARAAAAH 70 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ PS+ +G VPAIK AAA G ++I +TPAT Sbjct: 71 KPDALIVACNTASVHALPALRAELEPSIPVIGTVPAIKPAAAG--GGPVAIWATPATTGS 128 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE +D I + + + Sbjct: 129 PYQRGLIKEFAGSVEVTEVPCPGLADAVERA------DKDAIDRAVAAA-AALTPRDVRA 181 Query: 195 IVLACTHYPLIVHVFRQL-----SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 +VL CTHY L+ R P V ++ ++A +A + Sbjct: 182 VVLGCTHYELVSERIRAAVQQPGLPPLV-LHGSAGAVAAQALRRIGAEPAPDASPSGRLT 240 Query: 250 LFLSG 254 + LSG Sbjct: 241 VLLSG 245 >gi|21219535|ref|NP_625314.1| glutamate racemase [Streptomyces coelicolor A3(2)] gi|11071227|emb|CAC14386.1| putative glutamate racemase [Streptomyces coelicolor A3(2)] Length = 280 Score = 172 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 95/245 (38%), Gaps = 15/245 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ I D G P+G L R + ++ + Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPKDLTGRALG-VAEAAAAH 80 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT Sbjct: 81 RPDALIVGCNTATVHALPALRARLEPDVPVIGTVPAIKPAAAG--GGPVAIWATPATTGS 138 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE ++ E Sbjct: 139 PYQRGLIEDFAGDTEVTEVPCPGLADAVEH-------ADETAITEAVAAAAALTPDDVTT 191 Query: 195 IVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFDDHAL 250 +VL CTHY L+ R P + ++ ++A +A + + Sbjct: 192 VVLGCTHYELVAERIRAAVQRPGAPRLVLHGSAGAVAAQALRRIGARPDPGAPATGTLTV 251 Query: 251 FLSGK 255 LSG+ Sbjct: 252 LLSGR 256 >gi|46404909|gb|AAS93325.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + G GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYGSLAPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|126348285|emb|CAJ90006.1| putative glutamate racemase [Streptomyces ambofaciens ATCC 23877] Length = 280 Score = 172 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 96/245 (39%), Gaps = 15/245 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ I D G P+G L R + + + Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPEDLTGRALAVAEAA-AAH 80 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ CNTA LR+ F P++ +G VPAIK AAA G ++I +TPAT Sbjct: 81 RPDALIVGCNTATVHALPALRARFEPALPVIGTVPAIKPAAAG--GGPVAIWATPATTGS 138 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y +LI + + + V LA VE + Sbjct: 139 PYQRDLIERFGGEATVTEVPCPGLADAVEHADEAAITAAVAAAAALTP-------GDVTT 191 Query: 195 IVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFDDHAL 250 +VL CTHY L+ R P + ++ ++A +A + + Sbjct: 192 VVLGCTHYELVAERIRAAVQRPGAPRLVLHGSAGAVAAQALRRIGVRPDPGAPAEGTLTV 251 Query: 251 FLSGK 255 LSG+ Sbjct: 252 LLSGR 256 >gi|12055979|emb|CAC21113.1| glutamate racemase [Streptococcus pyogenes] gi|14475677|gb|AAK62688.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 172 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|12055961|emb|CAC21098.1| glutamate racemase [Streptococcus pyogenes] gi|33521549|gb|AAQ20062.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|12055941|emb|CAC21088.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++T + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKATL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|12055935|emb|CAC21085.1| glutamate racemase [Streptococcus pyogenes] gi|12055939|emb|CAC21087.1| glutamate racemase [Streptococcus pyogenes] gi|12055949|emb|CAC21092.1| glutamate racemase [Streptococcus pyogenes] gi|12055967|emb|CAC21107.1| glutamate racemase [Streptococcus pyogenes] gi|14475673|gb|AAK62686.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|14475679|gb|AAK62689.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|46404931|gb|AAS93336.1| glutamate racemase [Streptococcus pyogenes] gi|46404933|gb|AAS93337.1| glutamate racemase [Streptococcus pyogenes] gi|115394063|gb|ABI97001.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|33521545|gb|AAQ20060.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKLTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|12055943|emb|CAC21089.1| glutamate racemase [Streptococcus pyogenes] gi|12055947|emb|CAC21091.1| glutamate racemase [Streptococcus pyogenes] gi|12055953|emb|CAC21094.1| glutamate racemase [Streptococcus pyogenes] gi|12055969|emb|CAC21108.1| glutamate racemase [Streptococcus pyogenes] gi|14475675|gb|AAK62687.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|33521547|gb|AAQ20061.1| glutamate racemase [Streptococcus pyogenes] gi|33521551|gb|AAQ20063.1| glutamate racemase [Streptococcus pyogenes] gi|33521557|gb|AAQ20066.1| glutamate racemase [Streptococcus pyogenes] gi|46404925|gb|AAS93333.1| glutamate racemase [Streptococcus pyogenes] gi|115394071|gb|ABI97005.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|12055977|emb|CAC21112.1| glutamate racemase [Streptococcus pyogenes] gi|46404923|gb|AAS93332.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|46404919|gb|AAS93330.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKLTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|12055933|emb|CAC21084.1| glutamate racemase [Streptococcus pyogenes] gi|12055963|emb|CAC21101.1| glutamate racemase [Streptococcus pyogenes] gi|12055975|emb|CAC21111.1| glutamate racemase [Streptococcus pyogenes] gi|46404921|gb|AAS93331.1| glutamate racemase [Streptococcus pyogenes] gi|46404927|gb|AAS93334.1| glutamate racemase [Streptococcus pyogenes] gi|115394065|gb|ABI97002.1| glutamate racemase [Streptococcus pyogenes] gi|115394067|gb|ABI97003.1| glutamate racemase [Streptococcus pyogenes] gi|115394069|gb|ABI97004.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|12055937|emb|CAC21086.1| glutamate racemase [Streptococcus pyogenes] gi|12055955|emb|CAC21095.1| glutamate racemase [Streptococcus pyogenes] gi|12055973|emb|CAC21110.1| glutamate racemase [Streptococcus pyogenes] gi|46404903|gb|AAS93322.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|46404915|gb|AAS93328.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVTSDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|33521553|gb|AAQ20064.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLVPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|12055957|emb|CAC21096.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|12055945|emb|CAC21090.1| glutamate racemase [Streptococcus pyogenes] gi|12055959|emb|CAC21097.1| glutamate racemase [Streptococcus pyogenes] gi|12055971|emb|CAC21109.1| glutamate racemase [Streptococcus pyogenes] gi|46404913|gb|AAS93327.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|33521555|gb|AAQ20065.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|46404905|gb|AAS93323.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAATKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|46404917|gb|AAS93329.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPRFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|289809548|ref|ZP_06540177.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 169 Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 3/164 (1%) Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168 PAIK AA T +G++ +L+T AT++R YT LI + ++C I ++ S L E G Sbjct: 2 PAIKPAARLTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHG 61 Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + +E+++ + E D +VL CTH+PL+ Q+ P +D+ +IAR Sbjct: 62 DSVSLEELRRILRPWLRMPEP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIAR 119 Query: 229 RARCLLPRINTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 R LL + A ++ P + ++Q +G ++ Sbjct: 120 RTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 163 >gi|225010450|ref|ZP_03700921.1| Glutamate racemase [Flavobacteria bacterium MS024-3C] gi|225005279|gb|EEG43230.1| Glutamate racemase [Flavobacteria bacterium MS024-3C] Length = 138 Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 2/134 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I FDSG+GG V + L+P IYVAD PYG + + ++ Sbjct: 6 GPIGFFDSGVGGTSVWSAVNNLLPNESTIYVADSANAPYGERSAETILALSIKNTDFLIS 65 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 K L V+ACNTA T LR + + F+G PAIK AA T +G + +L+T TL Sbjct: 66 KG-CKLIVVACNTATTNAIAVLREKY-IIPFIGIEPAIKPAALQTLTGKVGLLATKGTLG 123 Query: 134 RTYTSNLIHSYVSQ 147 + Sbjct: 124 SALFHKTVLENAGG 137 >gi|198385967|gb|ACH86246.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|209486171|gb|ACI48541.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVTSLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|226365519|ref|YP_002783302.1| glutamate racemase [Rhodococcus opacus B4] gi|226244009|dbj|BAH54357.1| glutamate racemase [Rhodococcus opacus B4] Length = 257 Score = 171 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 12/242 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L PE I D G P+G + + R++ +D+ Sbjct: 3 VALIDSGLGMLPTAAWLRKLRPELDLILALDPDGAPWGPKPEQWVIDRVLATAQRSVDRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V+ CNTA D +R P + +G VPAIK AAA S + AT Sbjct: 63 A-EVIVLPCNTASVTALDHVREFVGPQVPVVGTVPAIKPAAAAFASVAVWAT--AATTAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++LI + + + V+ LA ++ E E E+ Sbjct: 120 RYQADLIEKFGNGSSVVGVACHGLAEAIDRG-------EREAAAAAIASAAERTPGDVGA 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHYPL+ P V D+++++A + + +N T +FLSG Sbjct: 173 VVLGCTHYPLMADEIAARLPAGVRLFDSAEAVAAQTLRRIDALNRPSTGE-GTVEVFLSG 231 Query: 255 KP 256 +P Sbjct: 232 RP 233 >gi|161527572|ref|YP_001581398.1| glutamate racemase [Nitrosopumilus maritimus SCM1] gi|160338873|gb|ABX11960.1| Glutamate racemase [Nitrosopumilus maritimus SCM1] Length = 251 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 17/256 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+G L ++++M+ IY AD +PYG L +R+M ++L+K+ Sbjct: 4 IAVFDSGLGSLSIIKEMQKAFKSE-IIYFADQQSYPYGKKSQAQL-ERIMRKSINLLEKF 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P V+A NT L+ D + P +K+A T+S I IL+T + + Sbjct: 62 SPDFIVVASNTPS-LMLD-----LGTNRIFVVKPPLKEAKKITKSKQIGILATESATKSK 115 Query: 136 YTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 S I + + I ++ L VE + K E K I+ + D Sbjct: 116 GLSKYIQENIPKSFKIFKINGTKLVDLVESGKFLTEKKYCE--KIIKKKLEILNENQIDA 173 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 + L+ TH P + + P + ++D + +A++ +I Q++ + +F SG Sbjct: 174 VTLSSTHLPFLKKYLEKEFP-NIQFVDPGNIVAQKIYF---KIKNKQSKK-NSLKIFTSG 228 Query: 255 KPDIAMRRLMQGFGLK 270 +L + G+K Sbjct: 229 NTKEFQLKLSK-IGIK 243 >gi|46404929|gb|AAS93335.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGSSVKLIDSGAECVRDISVL 146 >gi|12055951|emb|CAC21093.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRSIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|162147611|ref|YP_001602072.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5] gi|161786188|emb|CAP55770.1| putative glutamate racemase [Gluconacetobacter diazotrophicus PAl 5] Length = 224 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 3/201 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +D P L VIACNTA TL LR + ++ F+G VP IK AA +++ I +L+T AT Sbjct: 13 IDALDPDLVVIACNTASTLALPALRERY-TLPFVGCVPPIKWAAELSRTRTIGLLATRAT 71 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +RR Y +L Y C + + LA E G I D I +E++ F + G Sbjct: 72 VRRPYLGDLQRRYAPDCTLLAHGARGLADLAECAFRGHAIATDAIDRELDALFGQPGGAA 131 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 DV+ + CTHY ++ R SP WLD ++++AR+A +L + T A F Sbjct: 132 IDVVGIGCTHYTFLMDRLRAASPPGTIWLDPAEAVARQAATVLGPLGT-AVPSRPARAFF 190 Query: 252 LSGKPDIA-MRRLMQGFGLKS 271 + + + M G + Sbjct: 191 TAAPAEPERLAAAMAPLGYGA 211 >gi|256789389|ref|ZP_05527820.1| glutamate racemase [Streptomyces lividans TK24] gi|289773278|ref|ZP_06532656.1| glutamate racemase [Streptomyces lividans TK24] gi|289703477|gb|EFD70906.1| glutamate racemase [Streptomyces lividans TK24] Length = 280 Score = 170 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 94/245 (38%), Gaps = 15/245 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ I D G P+G L R + + + Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPKDLTGRALAVAEAA-AAH 80 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT Sbjct: 81 RPDALIVGCNTATVHALPALRARLEPDVPVIGTVPAIKPAAAG--GGPVAIWATPATTGS 138 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE ++ E Sbjct: 139 PYQRGLIEDFAGDTEVTEVPCPGLADAVEH-------ADETAITEAVAAAAALTPDDVTT 191 Query: 195 IVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFDDHAL 250 +VL CTHY L+ R P + ++ ++A +A + + Sbjct: 192 VVLGCTHYELVAERIRAAVQRPGAPRLVLHGSAGAVAAQALRRIGARPDPGAPATGTLTV 251 Query: 251 FLSGK 255 LSG+ Sbjct: 252 LLSGR 256 >gi|119952902|ref|YP_945111.1| glutamate racemase [Borrelia turicatae 91E135] gi|119861673|gb|AAX17441.1| glutamate racemase [Borrelia turicatae 91E135] Length = 254 Score = 170 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 26/267 (9%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 L+N I+IFDSG+GGL + + + +++YVAD+ FPYG L K ++ L Sbjct: 1 MSNLKNVIVIFDSGVGGLSYFEYISKRFVKRNYVYVADNKNFPYGEKSSDFLLKEILELI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y VIACNTA + D+L +FP + L +V +++ A + +++T Sbjct: 61 LKLEQMYNVAAIVIACNTASISVYDKLNFSFPVIYTLPSVCLVEELAY----KRVILVAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ + + L + L + VE G + KED + K + +E + Sbjct: 117 HATINSKFIQRE---KDCHWDLILKPASELVNFVE---YGDRFKEDAL-KYLNFLKLEVK 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV----DWLDNSDSIARRARCLLPRINTHQTRV 244 R D++ L CTHY I + PV + + L+ + + ++R Sbjct: 170 ASRRDMVFLGCTHYLHIKDMIENFLGIPVYENRELV---------TNELIKELKSIESRD 220 Query: 245 FDDHA-LFLSGKPDI-AMRRLMQGFGL 269 +L+ ++ + + +GL Sbjct: 221 DCFTRYFYLTQDENLYFYKNFCKKYGL 247 >gi|46404907|gb|AAS93324.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 170 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + I+ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGIIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|14475685|gb|AAK62692.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|198385961|gb|ACH86243.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 170 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVISLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|12055965|emb|CAC21103.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 170 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSSLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|14475687|gb|AAK62693.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVVSLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|46404911|gb|AAS93326.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGRSVKLIDSGAECVRDISVL 146 >gi|14475681|gb|AAK62690.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|14475683|gb|AAK62691.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] gi|14475691|gb|AAK62695.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|307325961|ref|ZP_07605160.1| Glutamate racemase [Streptomyces violaceusniger Tu 4113] gi|306888453|gb|EFN19440.1| Glutamate racemase [Streptomyces violaceusniger Tu 4113] Length = 259 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 15/217 (6%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSGIG L MR L P+ + +D P+G + + + + ++P Sbjct: 1 MDSGIGLLPTAAAMRRLRPDADLLLSSDPATMPWGPRTPEDVTELALG-CARAAAAHRPD 59 Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 ++ACNTA LR+ P + +G VPAIK AAA G I+I +TPAT Y Sbjct: 60 ALIVACNTASVHALPALRAELEPVLPVVGTVPAIKPAAAG--GGPIAIWATPATTGSPYQ 117 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 LI + + V LA V+ +DE + + +VL Sbjct: 118 RGLIRDFADGVEVTEVPCPGLADAVQH-------ADDEGIDAAVAAAAARTPREVTTVVL 170 Query: 198 ACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRA 230 CTHY L+ R P+ ++ ++A +A Sbjct: 171 GCTHYELVADRIRAAVQQPAAPPIALHGSAGAVAAQA 207 >gi|198250339|gb|ACH85186.1| glutamate racemase [Streptococcus canis] Length = 146 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTITSDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ A VE +I KK + GK D +VL CTH Sbjct: 60 QLLAPSVTVTSLACPKFAPIVESN----EIHSSVAKKVVYKSLAPLVGK-VDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|297162715|gb|ADI12427.1| putative glutamate racemase [Streptomyces bingchenggensis BCW-1] Length = 274 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L + L P+ + +D P+G + +R + + Sbjct: 3 IALMDSGIGLLPAAAAVHRLRPDADLVLSSDPGSMPWGPRTPEDVTQRALACVRAA-AAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ P + +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIVACNTASVHALSALRAELEPGLPVIGTVPAIKPAAAG--GGPVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V+ LA V+ + + Sbjct: 120 PYQRRLISDFADGVTVTEVACPGLAEAVQRADSAAIDAAV-------ADAAARTPRDIRA 172 Query: 195 IVLACTHYPLIVHVFRQLS 213 +VL CTHY L+ R Sbjct: 173 LVLGCTHYELVADRIRAAV 191 >gi|14475695|gb|AAK62697.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDMSVL 146 >gi|302562067|ref|ZP_07314409.1| glutamate racemase [Streptomyces griseoflavus Tu4000] gi|302479685|gb|EFL42778.1| glutamate racemase [Streptomyces griseoflavus Tu4000] Length = 264 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 65/245 (26%), Positives = 98/245 (40%), Gaps = 15/245 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + D G P+G L +R + + + Sbjct: 3 IALMDSGIGLLAATAAVRRLRPDADLVLSLDPDGMPWGPRTPQDLTERALAVAEAA-AAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIVGCNTATVHALTALRARLEPGLPVIGTVPAIKPAAAG--GGPLAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y +LI + + V LA VE ++ E Sbjct: 120 PYQRDLIEDFAGGVAVTQVPCWGLAEAVER-------ADETAIDAAVAAAAELTPDEVTT 172 Query: 195 IVLACTHYPLIVHVFRQLS--P--WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 +VL CTHY L+ R P P+ ++ ++A +A L Q + Sbjct: 173 VVLGCTHYELVGERIRAAVQRPGRPPLALHGSAGAVAAQALRRLGGRPAPQAPPSGTLTV 232 Query: 251 FLSGK 255 LSG+ Sbjct: 233 LLSGR 237 >gi|326439557|ref|ZP_08214291.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064] Length = 281 Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 113/269 (42%), Gaps = 16/269 (5%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66 P + + I + DSGIG L +R L P+ + D G P+G + +R + Sbjct: 14 PVDYGDRVKIALMDSGIGLLAAAAAVRGLRPDADLVLSQDPDGMPWGPRTPEGVTERALA 73 Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISI 125 + ++ P ++ACNTA LR+ P++ +G VPAIK AA G I+I Sbjct: 74 VARAA-AEHAPDALIVACNTATVHALPALRAALEPAIPVIGTVPAIKPAAVA--GGPIAI 130 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 +TPAT Y +LI + + V LA V+ +DE Sbjct: 131 WATPATTGSPYQRDLIGRFAGAVDVAEVPCPGLADAVDH-------ADDEAIDRAVAAAA 183 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 + + T +VL CTHY L+ R PV ++ ++A +A + Sbjct: 184 ARTPRDTRAVVLGCTHYELVAERIRDAIGTPVALHGSAGAVAAQALRRIGAAPAPGATAS 243 Query: 246 DDHALFLSGK----PDIAMRRLMQGFGLK 270 + LSG+ PD A+R +G GL+ Sbjct: 244 GTLTVLLSGRASALPDRALRY-AEGRGLQ 271 >gi|198385963|gb|ACH86244.1| glutamate racemase [Streptococcus canis] gi|198385965|gb|ACH86245.1| glutamate racemase [Streptococcus canis] gi|209486169|gb|ACI48540.1| glutamate racemase [Streptococcus canis] Length = 146 Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTITSDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ A VE +I KK + GK D +VL CTH Sbjct: 60 QLLAPSVTVTSLACPKFAPIVESN----EIHSSVAKKVVYKSLAPLVGK-VDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D+ R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146 >gi|329941791|ref|ZP_08291056.1| glutamate racemase [Streptomyces griseoaurantiacus M045] gi|329299508|gb|EGG43408.1| glutamate racemase [Streptomyces griseoaurantiacus M045] Length = 261 Score = 169 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 15/245 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D G P+G L R + + + Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLVLSSDPEGMPWGPRTPEDLTVRALAVAEAA-AAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ P + +G VPAIK AAA G +I +TPAT Sbjct: 62 RPDALIVACNTASVHTLPTLRARLEPGLPVIGTVPAIKPAAAG--GGPFAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + + V+ LA V+ + Sbjct: 120 PYQRGLIEEFAAGLDVAEVACPGLAEAVQHADEAAIDAAI-------ADAAARTPGDVTT 172 Query: 195 IVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFDDHAL 250 +VL CTHY L+ R P + ++ ++A +A + + + + Sbjct: 173 VVLGCTHYELVAERIRAALRGPGRSPLVLHGSATAVAAQALRRIGALPDPEATTRGTLTV 232 Query: 251 FLSGK 255 LSG+ Sbjct: 233 LLSGR 237 >gi|46404935|gb|AAS93338.1| glutamate racemase [Streptococcus pyogenes] Length = 146 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E+++ + LG V P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE ++ KK + GK D +VL CTH Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + ++ V +D+ R L Sbjct: 115 YPLLRPIIQNVTGPSVKLIDSGAECVRDISVL 146 >gi|14475689|gb|AAK62694.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 168 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 7/150 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 YPL+ + + + V +D+ R Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDIS 144 >gi|223984567|ref|ZP_03634697.1| hypothetical protein HOLDEFILI_01992 [Holdemania filiformis DSM 12042] gi|223963472|gb|EEF67854.1| hypothetical protein HOLDEFILI_01992 [Holdemania filiformis DSM 12042] Length = 244 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 24/249 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSGIGGL +L K+R P+ F+Y+AD PYG+ D L+ L + L+K Sbjct: 2 IGVFDSGIGGLRLLDKLRQRWPQEDFVYLADQAHVPYGSL-DRDTLLDLLQLNLNWLEKQ 60 Query: 76 QPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 V+ACNTA I R + + +Q A T+ I +L+TP T + Sbjct: 61 GADRIVVACNTASATGIARRYRGQAQIVEIIS--KTCEQIPASTE--KILVLATPFTAQS 116 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 ++ + Q + V LA +E C + E +K E+ D+ Sbjct: 117 HRYQQVLARQLPQAEVKEVGLSCLAFMIEH-LCPKQEIETYLKGELNAY-----RNGFDL 170 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 VLACTH+P F ++ + +D+ +SIA + + +G Sbjct: 171 AVLACTHFPFARDQFAKVLG--IPLIDS-ESIA---------LEAPAQPGQGTLRIATTG 218 Query: 255 KPDIAMRRL 263 ++ R+L Sbjct: 219 SVELLTRQL 227 >gi|239983757|ref|ZP_04706281.1| glutamate racemase [Streptomyces albus J1074] gi|291455563|ref|ZP_06594953.1| glutamate racemase [Streptomyces albus J1074] gi|291358512|gb|EFE85414.1| glutamate racemase [Streptomyces albus J1074] Length = 261 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 94/248 (37%), Gaps = 15/248 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G L + + + Sbjct: 3 IALVDSGIGLLPAAAAVRRLRPDADLVLSSDPDSMPWGPRTPEDLSAHALAVAEAAAEHA 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V+ACNTA LR F P + +G VPAIK AAA G ++I +TPAT Sbjct: 63 PDAL-VVACNTASVHALPALRERFEPGLPVIGTVPAIKPAAAA--GGHVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V+ LA V + + + Sbjct: 120 PYQRRLIAEFSGSTPVTEVACPGLADAV-------QWDDPTAVAAAIADAAARTPSTVTS 172 Query: 195 IVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 +VL CTHY L+ R P+ ++ ++A +A L + Sbjct: 173 VVLGCTHYELVGDAIRTAVEHSGTGPLTLHGSAPAVAAQALRRLGVAPDPAAPATGTLTV 232 Query: 251 FLSGKPDI 258 L+G+ + Sbjct: 233 LLNGRAEP 240 >gi|14475693|gb|AAK62696.1| putative glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis] Length = 146 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 7/152 (4%) Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 ACNTA + +E++ + LG + P A T G + ++ TP T+ I Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201 + ++ VE +I+ KK + GK D +VL CTH Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 YPL+ + + + V +D R L Sbjct: 115 YPLLRPIIQNVMGPSVKLIDRGAECVRDLSVL 146 >gi|332296003|ref|YP_004437926.1| glutamate racemase [Thermodesulfobium narugense DSM 14796] gi|332179106|gb|AEE14795.1| glutamate racemase [Thermodesulfobium narugense DSM 14796] Length = 277 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 15/233 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEY--HFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GG+ +L + YVAD + PYGN + L+ + + S L+ Sbjct: 3 IGIFDSGLGGVNILNSIINSNSPLIGDIFYVADTINVPYGNKDIEELELIVGNIIS-FLE 61 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132 L + ACNT+ + + ++L+ + +G P I + IL+T T+ Sbjct: 62 NKGCELIISACNTSSSTVLNKLKQK-TKIPIIGTIEPTINFVKETFHHKNLIILATKVTI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 N + +++ V+ L +E ++I ED + + ++ I+ Sbjct: 121 ESKIFENALS--ACDYNVYPVACPKLVDAIEFMNPSLEI-EDLLNRYLQ---IDINASEP 174 Query: 193 DVIVLACTHYPLIVHVFRQL----SPWPVDWLDNSDSIARRARCLLPRINTHQ 241 I+L CTHYPLI +++ + LD + I+ A L+ + + Sbjct: 175 IGILLGCTHYPLIKSQIKEVASKRFSNEIIILDPCERISSEALNLISKDSLIN 227 >gi|302549431|ref|ZP_07301773.1| glutamate racemase [Streptomyces viridochromogenes DSM 40736] gi|302467049|gb|EFL30142.1| glutamate racemase [Streptomyces viridochromogenes DSM 40736] Length = 283 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 92/246 (37%), Gaps = 17/246 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + D G P+G L +R + + + Sbjct: 3 IALMDSGIGLLAATTAVRRLRPDADLVLSLDPDGMPWGPRTPENLTERALAVAEAAAARR 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V CNTA LR+ F P + +G VPAIK AAA G +I +TPAT Sbjct: 63 PDALIV-GCNTATVHALTALRARFEPDLPVIGTVPAIKPAAAG--GGHFAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 TY LI + + V LA VE + Sbjct: 120 TYQRTLIRDFADGVPVTEVPCWGLAEAVEHADEAAIAAAVAAAAALTP-------DEVTT 172 Query: 195 IVLACTHYPLIVHVFRQLS-----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 +VL CTHY L+ R P V ++ ++A +A L Sbjct: 173 VVLGCTHYELVAERIRAAVQRPGRPPLV-LHGSAGAVAAQALRRLGEQPAPSATPLGTLT 231 Query: 250 LFLSGK 255 + LSG+ Sbjct: 232 VLLSGR 237 >gi|207093320|ref|ZP_03241107.1| glutamate racemase [Helicobacter pylori HPKX_438_AG0C1] Length = 156 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 6/152 (3%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132 Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+ Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 + N + ++ +++ + +EE Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE 151 >gi|213855738|ref|ZP_03383978.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 118 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 50/118 (42%), Positives = 78/118 (66%), Gaps = 1/118 (0%) Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76 L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61 Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKR 118 >gi|297197689|ref|ZP_06915086.1| glutamate racemase [Streptomyces sviceus ATCC 29083] gi|297146828|gb|EFH28366.1| glutamate racemase [Streptomyces sviceus ATCC 29083] Length = 262 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 91/246 (36%), Gaps = 17/246 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + D G P+G + R + L + Sbjct: 3 IALLDSGIGLLAATAAVRRLRPDADLVLSLDPDGMPWGPRTPDDIIGRALTLAEAA-AAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 P +I CNTA LR+ P + +G VPAIK AA + G +I +TPAT Sbjct: 62 GPEALIIGCNTATVHALTALRARLEPDLPVIGTVPAIKPAA--SAGGPFAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y L+ + V LA VE + + Sbjct: 120 PYQRGLLAEFADGVPATEVPCHGLAEAVEHADEAAIDAAVAAAAALTP-------EDVTT 172 Query: 195 IVLACTHYPLIVHVFRQLS-----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 +VL CTHY L+ R P V ++ ++A +A + + Sbjct: 173 VVLGCTHYELVAERIRAAVQRPGRPPLV-LHGSAGAVAAQALRRIGEQPAPEAAATGTLT 231 Query: 250 LFLSGK 255 + LSG+ Sbjct: 232 VLLSGR 237 >gi|294811101|ref|ZP_06769744.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064] gi|294323700|gb|EFG05343.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064] Length = 256 Score = 164 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 70/257 (27%), Positives = 108/257 (42%), Gaps = 16/257 (6%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSGIG L +R L P+ + D G P+G + +R + + ++ P Sbjct: 1 MDSGIGLLAAAAAVRGLRPDADLVLSQDPDGMPWGPRTPEGVTERALAVARAA-AEHAPD 59 Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 ++ACNTA LR+ P++ +G VPAIK AA G I+I +TPAT Y Sbjct: 60 ALIVACNTATVHALPALRAALEPAIPVIGTVPAIKPAAVA--GGPIAIWATPATTGSPYQ 117 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +LI + + V LA V+ +DE + + T +VL Sbjct: 118 RDLIGRFAGAVDVAEVPCPGLADAVDH-------ADDEAIDRAVAAAAARTPRDTRAVVL 170 Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK-- 255 CTHY L+ R PV ++ ++A +A + + LSG+ Sbjct: 171 GCTHYELVAERIRDAIGTPVALHGSAGAVAAQALRRIGAAPAPGATASGTLTVLLSGRAS 230 Query: 256 --PDIAMRRLMQGFGLK 270 PD A+R +G GL+ Sbjct: 231 ALPDRALRY-AEGRGLQ 246 >gi|254485925|ref|ZP_05099130.1| putative glutamate racemase [Roseobacter sp. GAI101] gi|214042794|gb|EEB83432.1| putative glutamate racemase [Roseobacter sp. GAI101] Length = 189 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 14/164 (8%) Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74 ++ IFDSG+GGL V ++ +P+ F+Y+AD PYG + + + D Sbjct: 2 AVGIFDSGLGGLTVWNAVQAQLPDVEFVYLADSAHAPYGVRTSDDIYNLTVAATQRLFDA 61 Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121 L ++ACNTA ++ ++ LG + ++ Q G Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPSDKRVLGVFVPLIESMTERQWGDNSPPREVDLK 120 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY 165 +++ +TPAT+ + + + + +E+ Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG 164 >gi|212637364|ref|YP_002313889.1| glutamate racemase [Shewanella piezotolerans WP3] gi|212558848|gb|ACJ31302.1| Glutamate racemase [Shewanella piezotolerans WP3] Length = 273 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 7/225 (3%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 +Q +I IFD+GIG + +K+R P+ +Y+AD FPYG+ L + + + Sbjct: 1 MQKAIAIFDAGIGSYSITEKLRKAFPKADLVYLADRASFPYGHKTQPELLSLIYSAMNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 D Y P L V+A N + +++R + +G P +K+A + S L+ +L + Sbjct: 61 QDNYSPQLIVLASNVPSVTVLEQVRE-LIDVPIIGVYPPVKKALDISTSSLVGVLGVKSL 119 Query: 132 LRRTYTSNLIHSYV-SQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 + + I + V + L VE E+ + ++ +K+ I+ ++ Sbjct: 120 VCSEQMTRYIENNVIKGQQAKSFDASELVHLVESGEFLFNQEKTKETVKRYIDTLLVQY- 178 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 D L+ TH P + F L P +++LD +D + R + Sbjct: 179 -PTMDTFTLSSTHLPWLWDYFTTLYP-TLNFLDPADDVVAGIRSV 221 >gi|260905616|ref|ZP_05913938.1| glutamate racemase [Brevibacterium linens BL2] Length = 268 Score = 162 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 15/232 (6%) Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88 + L P I D PYG+ AL+ R + + +L ++P VIACNTA Sbjct: 17 ADALFHLAPHADLILAMDPDFTPYGSLSPEALEARALNSAA-VLAAWEPDAIVIACNTAS 75 Query: 89 TLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147 + +R+ + P + +G VPA+K AA Q +I +TPAT Y NLI ++ ++ Sbjct: 76 VQALETVRARYEPDIPVIGTVPAVKMAAGTGQD--FAIWATPATTGSAYQQNLIDTFAAE 133 Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 + V+ LA + + I I+ + + + IVL CTHY L+ Sbjct: 134 VAVSPVACPGLAEAI------NEADIATIDSAIDAALDQMD-PGMETIVLGCTHYGLVAE 186 Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLL----PRINTHQTRVFDDHALFLSGK 255 + D+ +A++ + + Q + A + SG+ Sbjct: 187 RIMAARAGAITLFDSPIPVAKQTLRRIGIDAHGVGPGQPDTGEVIATYASGR 238 >gi|121730805|ref|ZP_01682883.1| ATPase of the AAA+ class [Vibrio cholerae V52] gi|121627620|gb|EAX60302.1| ATPase of the AAA+ class [Vibrio cholerae V52] Length = 129 Score = 162 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 47/123 (38%), Positives = 78/123 (63%), Gaps = 2/123 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++ Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126 Query: 136 YTS 138 YT Sbjct: 127 YTQ 129 >gi|290962603|ref|YP_003493785.1| glutamate racemase [Streptomyces scabiei 87.22] gi|260652129|emb|CBG75261.1| putative glutamate racemase [Streptomyces scabiei 87.22] Length = 268 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 18/236 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D G P+G L +R + + + Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLVISSDPDGMPWGPRTPQDLTERALAVATAAAAHA 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 L V CNTA LR+ P + +G VPAIK AA + G +I +TPAT Sbjct: 63 PDALIV-GCNTASVHALPALRALLEPGLPVIGTVPAIKPAA--SGGGPFTIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE + Sbjct: 120 PYQRGLIEEFAGGVAVTEVPCWGLAEAVEHADDAAIDAAIAAAAALTP-------ADVTT 172 Query: 195 IVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFD 246 +VL CTHY L+ R P + + ++ ++A +A L RI D Sbjct: 173 VVLGCTHYELVAERIRAAVQQPGRLPLVLHGSAGAVAAQA---LRRIGELPKPEAD 225 >gi|225549352|ref|ZP_03770325.1| glutamate racemase [Borrelia burgdorferi 94a] gi|225370210|gb|EEG99650.1| glutamate racemase [Borrelia burgdorferi 94a] Length = 305 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 32/262 (12%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++T TL + + ++ + + + ++ L + VE + KK C Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEYG--------ENYKKYALRC 204 Query: 184 FIEKEGKRTDV----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + + + L CTHY + + + +N + + + L+ +N Sbjct: 205 LEALKFEVVNTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELV---VKNLIRSMNF 259 Query: 240 HQTR--------VFDDHALFLS 253 + + F D +L+ Sbjct: 260 SEHKGNYYKNDFDFVDDEFYLT 281 >gi|312140967|ref|YP_004008303.1| glutamate racemase [Rhodococcus equi 103S] gi|325675397|ref|ZP_08155081.1| glutamate racemase [Rhodococcus equi ATCC 33707] gi|311890306|emb|CBH49624.1| putative glutamate racemase [Rhodococcus equi 103S] gi|325553368|gb|EGD23046.1| glutamate racemase [Rhodococcus equi ATCC 33707] Length = 255 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 12/240 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L P+ + D G P+G ++ + R++ +D+ Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLMLSLDPEGAPWGPRDERWVIDRVVGTARRAVDRG 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V+ CNTA + +R+ + +G VPAIK AAA S ++I +T AT Sbjct: 63 A-EVVVLPCNTASVTALEHVRADLGDSIPVIGTVPAIKPAAAVCDS--VAIWATAATTAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y +NL+ + + + V+ LA + + + E + + Sbjct: 120 DYQANLVKEFANGSSVVGVACHGLADAI-------DLGDVEAARAAIAAAAARTPDDVTG 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHYPL+ P V D+++++A + + + T + LSG Sbjct: 173 VVLGCTHYPLVADEIAAHLPDGVALFDSAEAVAAQTLRRIDALG-RDTTGQGTVEVLLSG 231 >gi|216264433|ref|ZP_03436425.1| glutamate racemase [Borrelia burgdorferi 156a] gi|223889211|ref|ZP_03623800.1| glutamate racemase [Borrelia burgdorferi 64b] gi|225549776|ref|ZP_03770741.1| glutamate racemase [Borrelia burgdorferi 118a] gi|215980906|gb|EEC21713.1| glutamate racemase [Borrelia burgdorferi 156a] gi|223885460|gb|EEF56561.1| glutamate racemase [Borrelia burgdorferi 64b] gi|225369736|gb|EEG99184.1| glutamate racemase [Borrelia burgdorferi 118a] Length = 305 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 32/262 (12%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y + + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMENFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++T TL + + ++ + + + ++ L + VE KK C Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEYGEN--------YKKYALRC 204 Query: 184 FIEKEGKRTDV----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + + + L CTHY + + + +N + + + L+ +N Sbjct: 205 LEALKFEVVNTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELV---VKNLIRSMNF 259 Query: 240 HQTR--------VFDDHALFLS 253 + + F D +L+ Sbjct: 260 SEHKGNYYKNDFDFVDDEFYLT 281 >gi|219684903|ref|ZP_03539845.1| glutamate racemase [Borrelia garinii PBr] gi|219671848|gb|EED28903.1| glutamate racemase [Borrelia garinii PBr] Length = 304 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 109/256 (42%), Gaps = 17/256 (6%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIVFDSGIGGLSYFKYIKNKIDRYQYVYVADNKNFPYGEKSSEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 +++L + Y ++ACNT + ++L FP + L V I A + Sbjct: 100 ILYLIEKLNKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSLISDLAL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++T TL + + ++ + + + ++ L + VE G K ++D ++ +E Sbjct: 156 LLIATNTTLESKFVKDQVNMHD---DLIVKAAGELVNFVE---YGEKYRKDALRC-LEAL 208 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 E +++ L CTHY + + + +N + + + + + Sbjct: 209 KFEVVNTDREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELVVQSLIRSINFPQCKNSY 266 Query: 244 VFDDH----ALFLSGK 255 +D +L+ Sbjct: 267 YKNDVDLVDEFYLTKN 282 >gi|237740830|ref|ZP_04571311.1| glutamate racemase [Fusobacterium sp. 4_1_13] gi|229431127|gb|EEO41339.1| glutamate racemase [Fusobacterium sp. 4_1_13] Length = 257 Score = 160 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 16/228 (7%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ +R P+ IY AD FPYG LK + + Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIKKSVDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K V+A N + D++++ +G P +K + I+ Sbjct: 61 LEKGA-SFIVLASNAPSITVLDKIKNKNK---VIGIYPPLKNVLNDRRKNT-LIIGAKVM 115 Query: 132 LRR----TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFI 185 + Y + Y Q H+ +S L +E ++ + E I+ I+ C Sbjct: 116 IESSELQDYIKKEVGDYCKQFHVEN-ASP-LIQLIESGDFINNTEETEKTIRNFIDNC-- 171 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 E + + D I L+ TH P I F+++ P V D +D++ + + Sbjct: 172 ENKFGKLDSITLSSTHLPWISSYFKKIIPE-VKLYDPADNLVKAIKNY 218 >gi|333022620|ref|ZP_08450684.1| putative glutamate racemase [Streptomyces sp. Tu6071] gi|332742472|gb|EGJ72913.1| putative glutamate racemase [Streptomyces sp. Tu6071] Length = 260 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 59/220 (26%), Positives = 88/220 (40%), Gaps = 15/220 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + RL ++ Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAAL 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P VIACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT Sbjct: 62 EPDALVIACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + ++ V+ LA V+ + V Sbjct: 120 EYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADA-------AARTPAGVRV 172 Query: 195 IVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRA 230 +VL CTHY L+ L ++ ++A +A Sbjct: 173 VVLGCTHYELVGARIAAALTRPGGAAPTLLGSAPAVAAQA 212 >gi|256846771|ref|ZP_05552226.1| glutamate racemase [Fusobacterium sp. 3_1_36A2] gi|256717737|gb|EEU31295.1| glutamate racemase [Fusobacterium sp. 3_1_36A2] Length = 257 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 16/228 (7%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ +R P+ IY AD FPYG LK + + Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIKKSVDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K V+A N + D++++ +G P +K + I+ Sbjct: 61 LEKGA-SFIVLASNAPSITVLDKIKNKNK---VIGIYPPLKNVLNDRRKNT-LIIGAKVM 115 Query: 132 LRR----TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFI 185 + Y + Y Q H+ +S L +E + + E I+ I+ C Sbjct: 116 IESSELQDYIKREVGDYCKQFHVEN-ASP-LIQLIESGNFINNTEETEKTIRNFIDNC-- 171 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 E + + D I L+ TH P I F+++ P V D +D++ + + Sbjct: 172 ENKFGKLDSITLSSTHLPWISSYFKKIIPE-VKLYDPADNLVKAIKNY 218 >gi|221217513|ref|ZP_03588984.1| glutamate racemase [Borrelia burgdorferi 72a] gi|221192791|gb|EEE19007.1| glutamate racemase [Borrelia burgdorferi 72a] Length = 305 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 24/258 (9%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++T TL + + ++ + + + ++ L + VE G K+D ++ +E Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEAL 208 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 E +++ L CTHY + + + +N + + + L+ +N + + Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHK 263 Query: 244 --------VFDDHALFLS 253 F D +L+ Sbjct: 264 GNYYKNDFDFVDDEFYLT 281 >gi|226320707|ref|ZP_03796265.1| glutamate racemase [Borrelia burgdorferi 29805] gi|226233923|gb|EEH32646.1| glutamate racemase [Borrelia burgdorferi 29805] Length = 305 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 24/258 (9%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++T TL + + ++ + + + ++ L + VE G K+D ++ +E Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEAL 208 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 E +++ L CTHY + + + +N + + + L+ +N + + Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHK 263 Query: 244 --------VFDDHALFLS 253 F D +L+ Sbjct: 264 GNYYKNDFDFVDDEFYLT 281 >gi|51598363|ref|YP_072551.1| glutamate racemase [Borrelia garinii PBi] gi|51572934|gb|AAU06959.1| glutamate racemase [Borrelia garinii PBi] Length = 260 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 11/209 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I++FDSGIGGL + ++ M Y ++YVAD+ FPYG L + +++L Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKNKMDGYQYVYVADNKNFPYGEKSSEYLLEAVLYLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y ++ACNT + ++L FP + L V +I + +++T Sbjct: 61 EKLNKIYNISALILACNTISVSVYNKLNFIFPVVYTLPEVSSISDLVL----KRVLLIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + + ++ + + + ++ L + VE G K ++D I+ +E E Sbjct: 117 NTTLESKFVKDQVNMHN---DLIIKAAGELVNFVE---YGEKYRKDAIRC-LEALKFEVV 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217 +++ L CTHY + + PV Sbjct: 170 NTGREIVFLGCTHYLHLKAMIEDFLKIPV 198 >gi|218249889|ref|YP_002374628.1| glutamate racemase [Borrelia burgdorferi ZS7] gi|226321989|ref|ZP_03797514.1| glutamate racemase [Borrelia burgdorferi Bol26] gi|218165077|gb|ACK75138.1| glutamate racemase [Borrelia burgdorferi ZS7] gi|226232579|gb|EEH31333.1| glutamate racemase [Borrelia burgdorferi Bol26] Length = 305 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 106/262 (40%), Gaps = 32/262 (12%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++T TL + + ++ + + + ++ L + VE KK C Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEYGEN--------YKKYALRC 204 Query: 184 FIEKEGKRTDV----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 + + + + L CTHY + + + +N + + + L+ +N Sbjct: 205 LEALKFEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNF 259 Query: 240 HQTR--------VFDDHALFLS 253 + + F D +L+ Sbjct: 260 SEHKGNYYKNDFDFVDDEFYLT 281 >gi|318059525|ref|ZP_07978248.1| glutamate racemase [Streptomyces sp. SA3_actG] Length = 260 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 15/220 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + RL ++ Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAAL 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P V+ACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + ++ V+ LA V+ + V Sbjct: 120 EYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADA-------AARTPAGVRV 172 Query: 195 IVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRA 230 +VL CTHY L+ L ++ ++A +A Sbjct: 173 VVLGCTHYELVGARIAAALTRPGGAAPTLLGSAPAVAAQA 212 >gi|225552350|ref|ZP_03773290.1| glutamate racemase [Borrelia sp. SV1] gi|225371348|gb|EEH00778.1| glutamate racemase [Borrelia sp. SV1] Length = 261 Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 24/253 (9%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I+IFDSGIGGL + ++ + E ++YVAD+ FPYG L + ++FL Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGECQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y V+ACNT + ++L FP + L V ++ + +++T Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + + ++ + + + ++ L + VE G K+D ++ +E E Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEALKFEVV 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----- 243 +++ L CTHY + + + +N + + + L+ +N + + Sbjct: 170 NTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHKGNYYK 224 Query: 244 ---VFDDHALFLS 253 F D +L+ Sbjct: 225 NDFDFVDDEFYLT 237 >gi|224532535|ref|ZP_03673159.1| glutamate racemase [Borrelia burgdorferi WI91-23] gi|224512525|gb|EEF82902.1| glutamate racemase [Borrelia burgdorferi WI91-23] Length = 305 Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 24/258 (9%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y + + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMENFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++T TL + + ++ + + + ++ L + VE G K+D ++ +E Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEAL 208 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 E +++ L CTHY + + + +N + + + L+ +N + + Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHK 263 Query: 244 --------VFDDHALFLS 253 F D +L+ Sbjct: 264 GNYYKNDFDFVDDEFYLT 281 >gi|224532254|ref|ZP_03672886.1| glutamate racemase [Borrelia valaisiana VS116] gi|224511719|gb|EEF82125.1| glutamate racemase [Borrelia valaisiana VS116] Length = 260 Score = 159 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 17/251 (6%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++FL Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKSKIEGYQYVYVADNKNFPYGEKSSDYLLQSVLFLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y + V+ACNT + ++L FP + L V ++ + A + +++T Sbjct: 61 EKLKKIYNIIALVLACNTISVSVYNKLNFVFPVIYTLPEVSSVSELAL----KKVLLIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + + ++ + + + ++ L + VE G K ++D ++ +E E Sbjct: 117 NTTLESKFVKDQVNIHD---DLIVKAAGELVNFVE---YGEKFRKDALRC-LEALKFEVV 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRV 244 +++ L CTHY + + + +N + + + + + N H+ V Sbjct: 170 HTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELVVQSLIRSINFFECKGNYHKNDV 227 Query: 245 FDDHALFLSGK 255 +L+ Sbjct: 228 NFVDEFYLTKN 238 >gi|195941838|ref|ZP_03087220.1| glutamate racemase (murI) [Borrelia burgdorferi 80a] Length = 261 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 24/253 (9%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y V+ACNT + ++L FP + L V ++ + +++T Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + + ++ + + + ++ L + VE G K+D ++ +E E Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEALKFEVV 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----- 243 +++ L CTHY + + + +N + + + L+ +N + + Sbjct: 170 NTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHKGNYYK 224 Query: 244 ---VFDDHALFLS 253 F D +L+ Sbjct: 225 NDFDFVDDEFYLT 237 >gi|312147962|gb|ADQ30621.1| glutamate racemase [Borrelia burgdorferi JD1] Length = 261 Score = 158 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 32/257 (12%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y V+ACNT + ++L FP + L V ++ + +++T Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + + ++ + + + ++ L + VE + KK C + Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEYG--------ENYKKYALRCLEALK 165 Query: 189 GKRTDV----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR- 243 + + + L CTHY + + + +N + + + L+ +N + + Sbjct: 166 FEVVNTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHKG 220 Query: 244 -------VFDDHALFLS 253 F D +L+ Sbjct: 221 NYYKNDFDFVDDEFYLT 237 >gi|302523482|ref|ZP_07275824.1| glutamate racemase [Streptomyces sp. SPB78] gi|302432377|gb|EFL04193.1| glutamate racemase [Streptomyces sp. SPB78] Length = 260 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 59/220 (26%), Positives = 89/220 (40%), Gaps = 15/220 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + RL ++ Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAAL 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P V+ACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + ++ V+ LA V+ + V Sbjct: 120 EYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADA-------AARTPAGVRV 172 Query: 195 IVLACTHYPLIVHVFRQLS--PWPV--DWLDNSDSIARRA 230 +VL CTHY L+ P L ++ ++A +A Sbjct: 173 VVLGCTHYELVGARIAAALTRPGRAAPTLLGSAPAVAAQA 212 >gi|219685353|ref|ZP_03540172.1| glutamate racemase [Borrelia garinii Far04] gi|219673126|gb|EED30146.1| glutamate racemase [Borrelia garinii Far04] Length = 260 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 11/209 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + +++L Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKNKIDGYQYVYVADNKNFPYGEKSSEYLLEAILYLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y ++ACNT + ++L FP + L V I A + +++T Sbjct: 61 EKLNKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSLISDLAL----KRVLLIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + + ++ + + + ++ L + VE G K ++D ++ +E E Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEH---GEKYRKDALRC-LEALKFEVV 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217 +++ L CTHY + + PV Sbjct: 170 NTDREIVFLGCTHYLHLKSMIEDFLKIPV 198 >gi|224534028|ref|ZP_03674612.1| glutamate racemase [Borrelia burgdorferi CA-11.2a] gi|224512864|gb|EEF83231.1| glutamate racemase [Borrelia burgdorferi CA-11.2a] Length = 305 Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 24/258 (9%) Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63 D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPKYLLEA 99 Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++FL + Y V+ACNT + ++L FP + L V ++ + Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++T TL + + ++ + + + ++ L + VE G K+D ++ +E Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEAL 208 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 E +++ L CTHY + + + +N + + + L+ +N + + Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHK 263 Query: 244 --------VFDDHALFLS 253 F D +L+ Sbjct: 264 GNYYKNDFDFVDDEFYLT 281 >gi|224534952|ref|ZP_03675521.1| glutamate racemase [Borrelia spielmanii A14S] gi|224513892|gb|EEF84217.1| glutamate racemase [Borrelia spielmanii A14S] Length = 260 Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 11/209 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFEYIKSKLGGCQYVYVADNKNFPYGKKSPEYLLEAVLFLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y ++ACNT + ++L FP + L V + A + +++T Sbjct: 61 ERLKKIYNVSALILACNTISVSVYNKLNFVFPVVYTLPEVSLVSDLAL----KRVLLIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + + ++ + + + ++ L + VE G K K+D ++ +E E Sbjct: 117 NTTLESKFVKDQVNMHN---DLIVKAAGELVNFVE---YGKKYKKDALRC-LEALKSEVV 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217 +++ L CTHY + + PV Sbjct: 170 NTGREIVFLGCTHYLHLKSMIEDFLKIPV 198 >gi|29827966|ref|NP_822600.1| glutamate racemase [Streptomyces avermitilis MA-4680] gi|29605067|dbj|BAC69135.1| putative glutamate racemase [Streptomyces avermitilis MA-4680] Length = 261 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 17/255 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + +R + + + Sbjct: 3 IALLDSGIGLLAAAAAVRRLRPDADLVLSSDPASVPWGPRTPQDVTERSLAVAEAA-AAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P + ACNT LR+ F P + +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIAACNTMSVHALPALRARFEPGLPVIGTVPAIKPAAAS--GGPVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE E+ V Sbjct: 120 PYQRGLIREFADGVAVTEVPCPGLADAVEHANEAAIDAAIA-------AAAERTPDDVRV 172 Query: 195 IVLACTHYPLIVHVFRQL-----SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 +VL CTHY L+ R P V ++ ++A +A + + + + Sbjct: 173 VVLGCTHYELVAERIRAAVQKPGLPPLV-LHGSAGAVAAQALRRIGELPAPEAPMGASLT 231 Query: 250 LFLSGKPDIAMRRLM 264 + L G+ + + Sbjct: 232 VLLGGREETLPAPAL 246 >gi|325138574|gb|EGC61136.1| glutamate racemase 1 [Neisseria meningitidis ES14902] Length = 191 Score = 157 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 7/170 (4%) Query: 101 SMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA 159 +M L + A K A A T++ I I++T T+ + IH + ++ +L Sbjct: 15 NMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLV 74 Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 VEE ++ + + ++ + D +VL CTH+PL+ + + + V Sbjct: 75 PLVEEGWLEHEVTRLTVCEYLKPLLAD----GIDTLVLGCTHFPLLKPLIGREA-HNVAL 129 Query: 220 LDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268 +D++ + A +L + T D+ ++S P + G Sbjct: 130 VDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 179 >gi|262066069|ref|ZP_06025681.1| putative glutamate racemase [Fusobacterium periodonticum ATCC 33693] gi|291380163|gb|EFE87681.1| putative glutamate racemase [Fusobacterium periodonticum ATCC 33693] Length = 257 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 94/227 (41%), Gaps = 16/227 (7%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I +FD+G+G +++ ++ P+ +Y AD FPYG L+ + + Sbjct: 1 MNKAIAVFDAGLGSYAIVEAIKKAYPQQDILYFADRKSFPYGTKTTEELRDIIENSIDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K V+A N + D++++ +G P +K + I+ Sbjct: 61 LEKGA-AFIVLASNAPSITVLDKIKNKD---NVIGIYPPLKDVIKDKKKNT-LIIGAKVM 115 Query: 132 LRR----TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFI 185 + Y + + Q H+ +S L +E ++ ++ E IK I+ C Sbjct: 116 IDSPELQEYIKKEVGDFYKQFHVEN-ASP-LIQLIESGDFINNVEETEKIIKNFIDNC-- 171 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 E + + D I L+ TH P + F+++ P D SD + + + Sbjct: 172 ENKFGKLDSITLSSTHLPWLSSYFQKIIPE-AKLYDPSDDLVKAIKN 217 >gi|237739926|ref|ZP_04570407.1| asp/Glu racemase [Fusobacterium sp. 2_1_31] gi|229423534|gb|EEO38581.1| asp/Glu racemase [Fusobacterium sp. 2_1_31] Length = 263 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 16/229 (6%) Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 +K+ +I +FD+G+G +++ ++ P+ IY AD FPYG LK + Sbjct: 5 EKMNKAIAVFDAGLGSYAIVEAIKKAYPKQDIIYFADRKSFPYGTKTTDELKTIIEDSVD 64 Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L K V+A N + D++++ +G P +K + I+ Sbjct: 65 FLLKKGA-SFIVLASNAPSITVLDKIKNKD---NVIGIYPPLKNVINDKKKNT-LIIGAK 119 Query: 130 ATLRR----TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGC 183 + Y + + Q H+ +S L +E ++ I+ E+ IK I+ C Sbjct: 120 VMIDSFELQEYIKKEVGDFQKQFHVEN-ASP-LIQLIESGDFINNIEKTENTIKNFIKTC 177 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 E++ + D I L+ TH P + F+++ P D +DS+ + + Sbjct: 178 --EEKYGKLDSITLSSTHLPWLSSYFQKIIPE-AKLYDPADSLVKAIKN 223 >gi|294782987|ref|ZP_06748311.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA] gi|294479865|gb|EFG27642.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA] Length = 257 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 94/226 (41%), Gaps = 12/226 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + +I +FD+G+G +++ ++ P+ IY AD FPYG LK + + Sbjct: 1 MNKAIAVFDAGLGSYAIVEAIKKTYPQQDIIYFADRKSFPYGTKTTDELKTIIEDSVDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K V+A N + D++++ +G P +K + I+ Sbjct: 61 LKKGA-SFIVLASNAPSITVLDKIKNKD---NVIGIYPPLKNVIKDKKKNT-LIIGAKVM 115 Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEK 187 + I V HL ++ L +E ++ I+ E+ IK I+ C E+ Sbjct: 116 IDSPELQEYIKKEVGDFYKQFHLENASPLIQLIESGDFINNIEKTENTIKNFIKTC--EE 173 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 + + D I L+ TH P + F+++ P D +DS+ + + Sbjct: 174 KYGKLDSITLSSTHLPWLSSYFQKIIPE-AKLYDPADSLVKAIKNY 218 >gi|126643405|ref|YP_001086389.1| glutamate racemase [Acinetobacter baumannii ATCC 17978] Length = 188 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 79/170 (46%), Gaps = 6/170 (3%) Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147 + + +R+ ++ + PA+K A A T S I++L+T T++ +LI +Y Sbjct: 2 TAVAVETIRAQI-NVPLIAIEPAVKPAVAMTLSKHIAVLATATTVKGKNLKSLIETYAQD 60 Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 + LV + LA ++E E+K ++ ++ D I+L CTHYP + Sbjct: 61 IKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQKVDTIILGCTHYPFVSD 116 Query: 208 VFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDDHALFLSGKP 256 +++ + ++ S+++ A+ R L + ++ +H ++ S P Sbjct: 117 TIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHIIWTSSDP 166 >gi|312149583|gb|ADQ29654.1| glutamate racemase [Borrelia burgdorferi N40] Length = 261 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 24/253 (9%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y V+ACNT + ++L FP + L V ++ + +++T Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + + ++ + + + ++ L + VE G K+D + +E E Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDAFRC-LEALKFEVV 169 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----- 243 +++ L CTHY + + + +N + + + L+ +N + + Sbjct: 170 NTGREIVFLGCTHYLHLKTLIEDFL--KIPVYENRELV---VKNLIRSMNFSEHKGNYYK 224 Query: 244 ---VFDDHALFLS 253 F D +L+ Sbjct: 225 NDFDFVDDEFYLT 237 >gi|15594446|ref|NP_212234.1| glutamate racemase (murI) [Borrelia burgdorferi B31] gi|11386901|sp|O51127|MURI_BORBU RecName: Full=Glutamate racemase gi|2687975|gb|AAC66479.1| glutamate racemase (murI) [Borrelia burgdorferi B31] Length = 261 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 32/257 (12%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + Y V+ACNT + ++L FP + L V ++ + +++T Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + + ++ + + + ++ L + VE + KK C + Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEYG--------ENYKKYALRCLEALK 165 Query: 189 GKRTDV----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR- 243 + + + L CTHY + + + +N + + + L+ +N + + Sbjct: 166 FEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHKG 220 Query: 244 -------VFDDHALFLS 253 F D +L+ Sbjct: 221 NYYKNDFDFVDDEFYLT 237 >gi|325142727|gb|EGC65104.1| glutamate racemase 1 [Neisseria meningitidis 961-5945] Length = 185 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 7/170 (4%) Query: 101 SMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA 159 +M L + A K A A T++ I I++T T+ + IH + ++ +L Sbjct: 9 NMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLV 68 Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 VEE ++ + + ++ + D +VL CTH+PL+ + + + V Sbjct: 69 PLVEEGWLEHEVTRLTVCEYLKPLLAD----GIDTLVLGCTHFPLLKPLIGREA-HNVAL 123 Query: 220 LDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268 +D++ + A +L + T D+ ++S P + G Sbjct: 124 VDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 173 >gi|294785961|ref|ZP_06751248.1| glutamate racemase [Fusobacterium sp. 3_1_27] gi|294486298|gb|EFG33661.1| glutamate racemase [Fusobacterium sp. 3_1_27] Length = 256 Score = 155 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 13/224 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ +R P+ IY AD FPYG LK + + + Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIEKSVNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K V+A N + D++++ +G P ++ + I+ Sbjct: 61 LEKGA-SFIVLASNAPSITVLDKIKNN----KVIGIYPPLRDVINDKKKNT-LIIGAKVM 114 Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEY--ACGIKIKEDEIKKEIEGCFIEK 187 + + N I V H+ ++ L +E I+ E IK I+ C E Sbjct: 115 IESSELQNYIKREVGDSYKQFHVENASSLIQLIESGTFINNIEETEKTIKNFIDNC--EN 172 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 + + D I L+ TH P + F ++ P D +DS+ + + Sbjct: 173 KFGKLDSITLSSTHLPWLSSYFEKIIP-QTKLYDPADSLVKAIK 215 >gi|227873305|ref|ZP_03991570.1| possible glutamate racemase [Oribacterium sinus F0268] gi|227840872|gb|EEJ51237.1| possible glutamate racemase [Oribacterium sinus F0268] Length = 121 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 1/107 (0%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 +I IFDSG+GGL VL+K++ +P FI+ D PYG + ++ + + Sbjct: 2 DKDKAIGIFDSGLGGLSVLRKLKQELPGEDFIFYGDQKHAPYGEKSEEEVRSLSLSAYRF 61 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 + +K +VIACNTA + LR FP +G PA+K A Sbjct: 62 LQEKG-VKATVIACNTATSAAAPYLRELFPEDIIIGMEPAVKPAVEA 107 >gi|216263947|ref|ZP_03435941.1| glutamate racemase [Borrelia afzelii ACA-1] gi|215979991|gb|EEC20813.1| glutamate racemase [Borrelia afzelii ACA-1] Length = 261 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 12/210 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMR-FLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++FL Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKSKVEGGYQYVYVADNKNFPYGEKSSEYLLEAVLFL 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + Y ++ACNT + ++L FP + L V +I A + +++ Sbjct: 61 IEKLKKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSSISDLAL----KRVLLIA 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T TL + + ++ + + + ++ L + VE G K K+D ++ +E E Sbjct: 117 TNTTLESKFVKDQVNMHE---DLIVKAAGELVNFVE---YGKKYKKDALRC-LEALKSEV 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217 +++ L CTHY + + PV Sbjct: 170 VNTGREIVFLGCTHYLHLKTMIEDFLKIPV 199 >gi|254385389|ref|ZP_05000717.1| glutamate racemase [Streptomyces sp. Mg1] gi|194344262|gb|EDX25228.1| glutamate racemase [Streptomyces sp. Mg1] Length = 263 Score = 152 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 102/249 (40%), Gaps = 20/249 (8%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L MR L P+ + +D G P+G L +R + + + Sbjct: 3 IALMDSGIGLLAAAAAMRRLRPDADLVISSDPDGMPWGPRTPADLTERAVAVARAA-AAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIVACNTASVHSLPNLRAELEPAIPVIGTVPAIKPAAAA--GGRVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + + V LA VE ++ + DV Sbjct: 120 PYQRGLIRDFAAGVRVTEVPCPGLADAVEHGNEEEVVRAVAAAAALTP---------PDV 170 Query: 195 --IVLACTHYPLIVHVFRQLS-----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247 +VL CTHY L+ V R + +++ +A +A + Sbjct: 171 TDVVLGCTHYELVDEVIRAALAERTGGAEPVFHGSAEPVAVQALRRIGARPEPGLPRTGG 230 Query: 248 HALFLSGKP 256 + LSG+P Sbjct: 231 LTVLLSGRP 239 >gi|237744000|ref|ZP_04574481.1| glutamate racemase [Fusobacterium sp. 7_1] gi|229433031|gb|EEO43243.1| glutamate racemase [Fusobacterium sp. 7_1] Length = 257 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 16/228 (7%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ ++ P+ IY AD FPYG LK + D Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTVEQLKTIIKNSI-DF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + V+A N + D++++ +G P +K I+ Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKNNDK---IIGIYPPLKDVIKDKMKNT-LIIGAKVM 115 Query: 132 LRRT----YTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFI 185 + Y + ++ Q H+ +S L +E A I E I+ I C Sbjct: 116 IESPELQDYIKREVGNFYKQFHVEN-ASP-LIQLIENGAFINNIMETEKTIRNFINDC-- 171 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 E + + D I L+ TH P + F+++ P V D +D++ + + Sbjct: 172 ENKFGKLDSITLSSTHLPWLFSYFKKIIPE-VKLYDPADNLVKAIKNY 218 >gi|239833140|ref|ZP_04681469.1| Glutamate racemase [Ochrobactrum intermedium LMG 3301] gi|239825407|gb|EEQ96975.1| Glutamate racemase [Ochrobactrum intermedium LMG 3301] Length = 278 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 4/255 (1%) Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 +K + P + L + + +FD+GIG +++ +R P+ IY AD FPYG L Sbjct: 2 LKHETAPAVENLHDPVAVFDAGIGSYALVELIRRSQPQRDIIYFADRASFPYGAKSRDQL 61 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + L V+A N ++ D L+S F ++ G P ++ A A ++S Sbjct: 62 LSIMRHTIRY-LTGLGAQTIVLASNAPSVMVLDALKSEF-AVPVYGVAPPVRAAFAASRS 119 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCH-IHLVSSMILASRVEEYACGIKIKEDEIKKE 179 G ++++ + + + + + + + L+++ + VE A + E K Sbjct: 120 GKVAVMGVRSMIESEELARFVRAEADRPEDVALINASAMVELVENGAFLRQPGETGQKVA 179 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239 I R D + L+ TH P + F P +LD +D + L Sbjct: 180 AFCDEIAASHPRIDTLTLSSTHLPWLRSFFETARPDW-RFLDPADDVIAALPQPLGGSGR 238 Query: 240 HQTRVFDDHALFLSG 254 V + A +SG Sbjct: 239 TVALVTESDAYPVSG 253 >gi|256027385|ref|ZP_05441219.1| Asp/Glu racemase [Fusobacterium sp. D11] gi|289765349|ref|ZP_06524727.1| glutamate racemase [Fusobacterium sp. D11] gi|289716904|gb|EFD80916.1| glutamate racemase [Fusobacterium sp. D11] Length = 257 Score = 151 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 89/226 (39%), Gaps = 12/226 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ ++ P+ IY AD FPYG LK + D Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTIEQLKTIIKNSI-DF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + V+A N + D++++ +G P +K I+ Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKNNDK---VIGIYPPLKDVIKDKMKNT-LIIGAKVM 115 Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEK 187 + + I V H+ ++ L +E A I E I+ I C E Sbjct: 116 IESPELQDYIKREVGNSYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--EN 173 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 + + D I L+ TH P + F+++ P V D +D++ + + Sbjct: 174 KFGKLDSITLSSTHLPWLFSYFKKIIPE-VKLYDPADNLVKAIKNY 218 >gi|260497932|ref|ZP_05816049.1| glutamate racemase [Fusobacterium sp. 3_1_33] gi|260196493|gb|EEW94023.1| glutamate racemase [Fusobacterium sp. 3_1_33] Length = 257 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 89/226 (39%), Gaps = 12/226 (5%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + I +FD+G+G +++ ++ P+ IY AD FPYG LK + D Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTVEQLKTIIKNSI-DF 59 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + V+A N + D++++ +G P +K I+ Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKNNDK---VIGIYPPLKDVIKDKMKNT-LIIGAKVM 115 Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEK 187 + + I V H+ ++ L +E A I E I+ I C E Sbjct: 116 IESPELQDYIKREVGNSYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--EN 173 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 + + D I L+ TH P + F+++ P V D +D++ + + Sbjct: 174 KFGKLDSITLSSTHLPWLFSYFKKIIPE-VKLYDPADNLVKAIKNY 218 >gi|255030221|ref|ZP_05302172.1| glutamate racemase [Listeria monocytogenes LO28] Length = 96 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 2/97 (2%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 ++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + + Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108 +D+ + VIACNTA ++R + +G + Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVI 95 >gi|111114922|ref|YP_709540.1| glutamate racemase [Borrelia afzelii PKo] gi|110890196|gb|ABH01364.1| glutamate racemase [Borrelia afzelii PKo] Length = 261 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 12/210 (5%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMR-FLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++ L Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKSKVGGGYQYVYVADNKNFPYGEKSSEYLLEAVLVL 60 Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + Y ++ACNT + ++L FP + L V +I A + +++ Sbjct: 61 IEKLKKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSSISDLAL----KRVLLIA 116 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T TL + + ++ + + + ++ L + VE G K K+D ++ +E E Sbjct: 117 TNTTLESKFVKDQVNMHE---DLIVKAAGELVNFVE---YGKKYKKDALRC-LEALKSEV 169 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217 +++ L CTHY + + PV Sbjct: 170 VNTGREIVFLGCTHYLHLKTMIEDFLKIPV 199 >gi|320012326|gb|ADW07176.1| Glutamate racemase [Streptomyces flavogriseus ATCC 33331] Length = 279 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 96/246 (39%), Gaps = 24/246 (9%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + +R + + + Sbjct: 19 IALMDSGIGLLAAAAAVRRLRPDADLVLSSDPGSMPWGPRTPEDVTRRALAVAQAA-AAH 77 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ P + +G VPAIK AAA G +I +TPAT Sbjct: 78 RPDALIVACNTASVHALPTLRAELEPGLPVIGTVPAIKPAAAG--GGPFAIWATPATTGS 135 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI+ + + V LA VE + + DV Sbjct: 136 PYQRGLINDFARAVDVTEVPCPGLADAVEHADEQGIDRAVAAAAALTP---------PDV 186 Query: 195 --IVLACTHYPLIVHVFRQLS----PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFD 246 +VL CTHY L+ R P + ++D++A +A L R+ + Sbjct: 187 TDVVLGCTHYELVAERIRAAVERDRPGRAPLVLHGSADAVAAQA---LRRVGAAPAPSAE 243 Query: 247 DHALFL 252 Sbjct: 244 PTGALT 249 >gi|182440359|ref|YP_001828078.1| putative glutamate racemase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468875|dbj|BAG23395.1| putative glutamate racemase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 261 Score = 150 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 15/246 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + + + + Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDITALALDVARAA-AAH 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P ++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT Sbjct: 62 RPDALIVACNTASVHALPALRAELEPALPVIGTVPAIKPAAAG--GGSVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA +E + + + Sbjct: 120 PYQRGLIGDFGGTAEVTEVPCPGLADALEHGDEAGIDRAVAAAAALTP-------RDVRA 172 Query: 195 IVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 +VL CTHY L+ R P+ ++ ++A +A + + Sbjct: 173 VVLGCTHYELVAARIRDAVQRPDGPPLALHGSAGAVAAQALRRIGADPAPGAEPSAGLTV 232 Query: 251 FLSGKP 256 +G+P Sbjct: 233 LQAGRP 238 >gi|297562279|ref|YP_003681253.1| glutamate racemase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846727|gb|ADH68747.1| Glutamate racemase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 261 Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 75/208 (36%), Gaps = 13/208 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R P+ D P+G + R + + Sbjct: 3 IALVDSGIGMLSTAAALRVARPDADLFLSMDPDHMPWGPRTPDEIVARALAGARAAQEAA 62 Query: 76 QP---VLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 V+ CNTA ELR+ F P + +G VPAIK AAA + ST AT Sbjct: 63 GDAALDAVVVPCNTASVHGLAELRAEFEPDVPVIGTVPAIKPAAAAGGPIA--VWSTAAT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 R Y L+ ++ + V+ LA VE + + + E Sbjct: 121 TRSGYQRQLVETFARGVEVTAVACAGLAEAVES-------ADPRLIDDAVAYAAELTPGD 173 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219 +VL CTHY L+ + Sbjct: 174 VHGVVLGCTHYDLVGAQISAALGGRAEL 201 >gi|54027044|ref|YP_121286.1| putative glutamate racemase [Nocardia farcinica IFM 10152] gi|54018552|dbj|BAD59922.1| putative glutamate racemase [Nocardia farcinica IFM 10152] Length = 253 Score = 149 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 12/244 (4%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG+G L +R L P+ + D G P+G + +R++ + I Sbjct: 3 VALIDSGLGLLPTAAWLRKLRPDVDLLLQLDPDGAPWGPKPEQWTIERVV-AAARISIAA 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V+ CNTA +++R+ P + +G VPAIK AAA + + +T AT Sbjct: 62 GAEVIVLPCNTASVTALEQVRAEVGPEVPVIGTVPAIKPAAAACRRVA--VWATAATTAS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y + LI + + V+ LA ++ + T+ Sbjct: 120 RYQAELIEKFGGDAEVVGVACHGLADAIDRGDLTAATDAIARA-------AAQTPAGTEG 172 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 +VL CTHYPL+V P V D++ ++A + + + T + SG Sbjct: 173 VVLGCTHYPLVVDAIVAALPAGVRLFDSAQAVAAQTIRKMEGLG-RPTTGEGVVRVLNSG 231 Query: 255 KPDI 258 +P Sbjct: 232 RPGT 235 >gi|153820612|ref|ZP_01973279.1| glutamate racemase [Vibrio cholerae NCTC 8457] gi|126508845|gb|EAZ71439.1| glutamate racemase [Vibrio cholerae NCTC 8457] Length = 176 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 9/158 (5%) Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 A+ S I +++TPAT++R YT LI + + ++ L+ S L + EE G + + Sbjct: 17 ASLIASKAIGLIATPATVKRQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLE 76 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 E+ ++ DV VL CTH+PLI +Q+ V +D+ +IARR + LL Sbjct: 77 ELASILQPL-----KNTIDVAVLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 131 Query: 235 PRINTHQTRVFDDHALFLSGKP--DIAMRRLMQGFGLK 270 H ++ S P + A+ ++ G Sbjct: 132 GI--EQAVGAKQKHRIYASAPPWEESALNIKLEQLGFN 167 >gi|298254110|ref|ZP_06977696.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19A] Length = 88 Score = 147 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 9/97 (9%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I DSG+GGL V++++ +P +Y+ D PYG +++ Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF 99 L + +L K + VIACNTA ++ +E+++ Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL 88 >gi|239939360|ref|ZP_04691297.1| putative glutamate racemase [Streptomyces roseosporus NRRL 15998] gi|291442794|ref|ZP_06582184.1| glutamate racemase [Streptomyces roseosporus NRRL 15998] gi|291345741|gb|EFE72645.1| glutamate racemase [Streptomyces roseosporus NRRL 15998] Length = 261 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G L + + + Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDLTALALDVARAAAAQR 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 P +IACNTA +R+ P++ +G VPAIK AAA G ++I +TPAT Sbjct: 63 -PDALIIACNTASVHALPAIRAELEPALPVIGTVPAIKPAAAG--GGSVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE E I + + Sbjct: 120 PYQRGLIAEFGGSAEVTEVPCPGLADAVEHG------DEAGIDRTVAAA-AALTPPDVRA 172 Query: 195 IVLACTHYPLIVHVFRQLS 213 +VL CTHY L+ R Sbjct: 173 VVLGCTHYELVATRIRDAV 191 >gi|239985839|ref|ZP_04706503.1| putative glutamate racemase [Streptomyces roseosporus NRRL 11379] Length = 261 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G L + + + Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDLTALALDVARAAAAQR 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 P +IACNTA +R+ P++ +G VPAIK AAA G ++I +TPAT Sbjct: 63 -PDALIIACNTASVHALPAIRAELEPALPVIGTVPAIKPAAAG--GGSVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y LI + + V LA VE E I + + Sbjct: 120 PYQRGLIAEFGGSAEVTEVPCPGLADAVEHG------DEAGIDRTVAAA-AALTPPDVRA 172 Query: 195 IVLACTHYPLIVHVFRQLS 213 +VL CTHY L+ R Sbjct: 173 VVLGCTHYELVATRIRDAV 191 >gi|167044446|gb|ABZ09122.1| putative Asp/Glu/hydantoin racemase [uncultured marine crenarchaeote HF4000_APKG6D9] Length = 253 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 16/250 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+G L ++++++ + IY AD +PYG L + + ++ Sbjct: 4 IAVFDSGLGSLSIIKEIQKITKSE-IIYFADQKNYPYGRKSQAQLSIIIQKTVKLLEKEF 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 P + V+A NT L+ D + + P +K A T++ I IL+T + + Sbjct: 63 APEIIVVASNTPS-LMLD-----LSTQKIVDVKPPLKIAKKITKTKQIGILATKSAINSK 116 Query: 136 YTSNLIHS--YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193 S I + I ++ L VE + ++ I+ + D Sbjct: 117 GLSEYIRKNNFSKSFKIFKINGSNLIDLVESGKF--LTDKKYCREIIKKDLEILSQQSID 174 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 I L+ TH + + ++ P + ++D+ +A+ + L N R + + S Sbjct: 175 TITLSSTHLIFLKSLLKKEFP-KIKFIDSGKIVAQ--KIFLKIKNKESKR--NSLKILTS 229 Query: 254 GKPDIAMRRL 263 G + +L Sbjct: 230 GNVNDFQIKL 239 >gi|326781027|ref|ZP_08240292.1| Glutamate racemase [Streptomyces cf. griseus XylebKG-1] gi|326661360|gb|EGE46206.1| Glutamate racemase [Streptomyces cf. griseus XylebKG-1] Length = 256 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 15/243 (6%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSGIG L +R L P+ + +D P+G + + + ++P Sbjct: 1 MDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDITALALDVARAA-AAHRPD 59 Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 ++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT Y Sbjct: 60 ALIVACNTASVHALPALRAELEPALPVIGTVPAIKPAAAG--GGSVAIWATPATTGSPYQ 117 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 LI + + V LA +E + + + +VL Sbjct: 118 RGLIGDFGGTADVTEVPCPGLADALEHGDEAGIDRAVAAAAALTP-------RDVRAVVL 170 Query: 198 ACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 CTHY L+ R P+ ++ ++A +A + + + + Sbjct: 171 GCTHYELVAARIRDAVQRPDGPPLALHGSAGAVAAQALRRIGAVPAPGAEPSAGLTVLQA 230 Query: 254 GKP 256 G+P Sbjct: 231 GRP 233 >gi|282863002|ref|ZP_06272062.1| Glutamate racemase [Streptomyces sp. ACTE] gi|282561984|gb|EFB67526.1| Glutamate racemase [Streptomyces sp. ACTE] Length = 256 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 96/243 (39%), Gaps = 15/243 (6%) Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78 DSGIG L +R L P+ + +D P+G + +R + + ++P Sbjct: 1 MDSGIGLLAAAAAVRRLRPDADLVLSSDPASMPWGPLTPEGVTERALAVARAA-AAHRPD 59 Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 + ++ACNTA LR P++ +G VPAIK AAA G ++I +TPAT Y Sbjct: 60 VLIVACNTASVHALPTLRDELEPALPVVGTVPAIKPAAAG--GGPVAIWATPATTGSPYQ 117 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 LI + S + V LA VE + + T +VL Sbjct: 118 RGLIEDFASHVDVTEVPCPGLADAVEHADEAAIDRAVAAAAALTP-------PGTAGVVL 170 Query: 198 ACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 CTHY L+ R + ++D++A +A + + + L Sbjct: 171 GCTHYELVAERIRAAVRHPGHPDATFHGSADAVAAQALRRVGAVPAPSAEPSGTLTVLLG 230 Query: 254 GKP 256 G P Sbjct: 231 GHP 233 >gi|329766264|ref|ZP_08257822.1| glutamate racemase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137323|gb|EGG41601.1| glutamate racemase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 253 Score = 145 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 19/253 (7%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I IFDSG+G L V+++++ + + IY AD FPYG +KK + + I + + Sbjct: 4 IAIFDSGLGSLSVIKQIQKQI-KCDIIYFADSKNFPYGKKSIKEIKKITLQTITTIQNLF 62 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +P L ++ NT L T S + +P + +A T+S I+IL+T + ++ Sbjct: 63 KPDLIIVGSNTLS------LTLTSHSKNIIIVLPPLSEAQKITKSKSIAILATESIVKSK 116 Query: 136 YTSNLIHSY-VSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEKEGKRT 192 + I+ + ++ I +++ L VE K + IKK ++ I Sbjct: 117 LLDSYINLFQINNTKIIKINASPLVELVESGKFYSDQKYCKVIIKKTLDYKLI---RNNV 173 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 DV+ L+ TH P ++ +++ P V +LD S + + +F Sbjct: 174 DVVTLSSTHLPFLLKFLKEIFP-HVTFLDPSI-----LLAKKLKKKYSNDNKRNSLQIFT 227 Query: 253 SGKPDIAMRRLMQ 265 SG +L Sbjct: 228 SGNIKSLKIKLKH 240 >gi|311895050|dbj|BAJ27458.1| putative glutamate racemase [Kitasatospora setae KM-6054] Length = 252 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 81/223 (36%), Gaps = 18/223 (8%) Query: 37 PEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELR 96 P+ + D G P+G + + ++P V+ACNTA LR Sbjct: 24 PDADLVVSCDPDGMPWGPRTPEDITAHALACARAA-VAHRPDALVVACNTASVHALAHLR 82 Query: 97 STF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 + F P++ +G VPAIK AAA I +T T Y LI + +H V+ Sbjct: 83 AEFEPALPVIGTVPAIKPAAAAGGVVAI--WATSRTTGSAYQRGLIEEFGGAARVHEVAC 140 Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV--IVLACTHYPLIVHVFRQLS 213 LA VE D +VL CTHY LI + Sbjct: 141 HGLAEAVERADRAAIAAAVASAAARTP---------ADTTDVVLGCTHYELIDDLIAAAL 191 Query: 214 PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256 P P ++D+IA + L R+ + +G+P Sbjct: 192 PGPARLHGSADAIAAQT---LRRLTPATPPGDATLTVLHTGRP 231 >gi|153008159|ref|YP_001369374.1| Asp/Glu racemase [Ochrobactrum anthropi ATCC 49188] gi|151560047|gb|ABS13545.1| Asp/Glu racemase [Ochrobactrum anthropi ATCC 49188] Length = 278 Score = 142 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 4/217 (1%) Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70 L + + +FD+GIG +++ +R P+ IY AD FPYG L + Sbjct: 12 DLNDPVAVFDAGIGSYALVELIRRSQPQRDIIYFADRASFPYGAKSRDQLLSIMRSTIQY 71 Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L V+A N ++ D L+S F ++ G P ++ A A + SG ++++ + Sbjct: 72 -LTSLGAQTIVLASNAPSVMVLDTLKSEF-AVPVYGVAPPVRTALAASHSGKVAVMGVRS 129 Query: 131 TLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 + ++ + + + L+++ + VE A + E K I Sbjct: 130 MIESEELADFVRTQADNPGDVALINASAMVELVENGAFLRQPDETAQKVAAFCDDIAASY 189 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 D + L+ TH P + F P +LD +D + Sbjct: 190 PLIDTLTLSSTHLPWLRPFFETARP-GWQFLDPADDV 225 >gi|332755092|gb|EGJ85457.1| asp/Glu/Hydantoin racemase family protein [Shigella flexneri 4343-70] Length = 230 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 84/214 (39%), Gaps = 10/214 (4%) Query: 49 GFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAF 104 PYGN + + + + + L +ACNT + ++ E +FP Sbjct: 2 NAPYGNRSADDIISLTKKMLTFLQSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPI 59 Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 L + + Q + I++T T++ LI S ++ S LA +EE Sbjct: 60 LSIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEE 119 Query: 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224 ++IKK + I I+L CTHYP++ + F ++P + +++ + Sbjct: 120 GNLNAPAILNDIKKHV-NHLISLHPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAH 175 Query: 225 SIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258 A + L ++N + + SG +I Sbjct: 176 DQAISIKNHLGQLNLLNSSNIGTLQINTSGSMEI 209 >gi|110806389|ref|YP_689909.1| hypothetical protein SFV_2500 [Shigella flexneri 5 str. 8401] gi|110615937|gb|ABF04604.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 230 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 83/214 (38%), Gaps = 10/214 (4%) Query: 49 GFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAF 104 PYGN + + + + + L +ACNT + ++ E +FP Sbjct: 2 NAPYGNRSADDIISLTKKMLTFLQSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPI 59 Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 L + + Q + I++T T++ LI S ++ S LA +EE Sbjct: 60 LSIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEE 119 Query: 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224 + IKK + I I+L CTHYP++ + F ++P + +++ + Sbjct: 120 GNLNAPAILNNIKKHV-NHLISLHPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAH 175 Query: 225 SIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258 A + L ++N + + SG +I Sbjct: 176 DQAISIKNHLGQLNLLNSSNIGTLQINTSGSMEI 209 >gi|312796622|ref|YP_004029544.1| glutamate racemase [Burkholderia rhizoxinica HKI 454] gi|312168397|emb|CBW75400.1| Glutamate racemase (EC 5.1.1.3) [Burkholderia rhizoxinica HKI 454] Length = 202 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 16/187 (8%) Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154 LR P M +G P IK AA +++ + +L+T +TL+ + L+ Y C + Sbjct: 2 LRERLP-MPIIGVEPGIKPAALQSRTRVAGVLATASTLKSARFNALLAQYGGDCRFVCQA 60 Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 L +E G + + + + C D++VL CTHYP ++ R ++ Sbjct: 61 GHGLVDAIEAGDIGSPV----VMQRLAACLQPILDASADILVLGCTHYPFLLDAVRTITA 116 Query: 215 WPVDWLDNSDSIARRARCLLPRINT-----------HQTRVFDDHALFLSGKPDIAMRRL 263 + +D ++IAR+ L T L +G R Sbjct: 117 DRLHVIDTGEAIARQLVRRLTDQQLRVDTGPAAAHAEPTSAPAPLRLVTTGDAPQLARIA 176 Query: 264 MQGFGLK 270 Q + Sbjct: 177 RQLLSVN 183 >gi|254304280|ref|ZP_04971638.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324472|gb|EDK89722.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 257 Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 19/241 (7%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 + N I +FD+G+G +++ ++ P+ IY AD FPYG LK + + Sbjct: 1 MNNPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRRSFPYGAKTTEELKNIIENSIDFL 60 Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K ++A N + D+ +G P +K + I+ Sbjct: 61 LKKGA-SFIILASNAPSITVLDK---IKKKDKVIGIYPPLKDVINDKKKNT-LIIGAKVM 115 Query: 132 LRR----TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFI 185 + Y + + Q H+ +S L +E ++ ++ E IK I+ C Sbjct: 116 IDSPELQEYIKKEVGDFYKQFHVEN-ASP-LIQLIESGDFINNVEETEKTIKNFIDNC-- 171 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 E + + D I L+ TH P + F+++ P D +DS+ + R P I T + +V+ Sbjct: 172 ENKFGKLDSITLSSTHLPWLSSYFKKIIP-QAKLYDPADSLVKAIR---PYITTGEGKVY 227 Query: 246 D 246 Sbjct: 228 S 228 >gi|205355664|ref|ZP_03222434.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346441|gb|EDZ33074.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8421] Length = 186 Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 14/194 (7%) Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATLRRT 135 + +IACNTA D LR+ G + A +A A + ++ I +++T AT++ Sbjct: 1 MLIIACNTASAYALDALRAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSE 59 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + S +I+ +++ + VEE + D ++ +E F K D + Sbjct: 60 EYQKRLLSQGY-TNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTPDAL 112 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255 +LACTH+PL+ + + + D+I + R N + S Sbjct: 113 ILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFYASSD 169 Query: 256 PDIAMRRLMQGFGL 269 + L Sbjct: 170 VESLKNTAKIWLNL 183 >gi|17902530|emb|CAC81005.1| glutamate racemase [Pseudanabaena sp. PCC 6903] Length = 115 Score = 138 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 1/96 (1%) Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68 +++ + I +FDSG+GGL VLQ++ +P +Y D PYG + + + + Sbjct: 6 QQEARFPIGVFDSGVGGLTVLQEVHRQLPNESVVYFGDTARLPYGKRSPAEIIEYVYEIL 65 Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF 104 + + ++++ACNT+ L D +R F Sbjct: 66 HWM-QSLEVKMAIMACNTSSALALDVVRPEFDIKLI 100 >gi|319779418|ref|YP_004130331.1| Glutamate racemase [Taylorella equigenitalis MCE9] gi|317109442|gb|ADU92188.1| Glutamate racemase [Taylorella equigenitalis MCE9] Length = 267 Score = 138 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 106/260 (40%), Gaps = 17/260 (6%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 ++N KKL I +FD+GIG + +R P+ IY AD FPY LK Sbjct: 1 MEN---LKKLVKPIAVFDAGIGSYAWARAIREKFPKQDIIYFADRANFPYAWKTKDELKA 57 Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + D L V+ N + E++ S+ +G++P I A +++G Sbjct: 58 CIKGAIECLADMGAC-LVVVTSNAPSITVVSEIKEEC-SVPVMGSIPPIASGVATSKTGE 115 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEI 180 I L + S +HLV++ L + VE ++ + +++KK + Sbjct: 116 IINLGVKILSSLPEFRFFVESISDDAKVHLVNAEDLVTTVESGQFITEHEKTVEQVKKFM 175 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + + ++ DV L+ TH IV +F++ +P + +++ L +I + Sbjct: 176 DD--VRQKYPNADVCTLSSTHLTWIVDIFQKAAP-DMQFINP-------VDRTLKKIEPY 225 Query: 241 QTRVFDDHALFLSGKPDIAM 260 + + + + + Sbjct: 226 TSEGSGTTLSYATSSEEYPL 245 >gi|261881951|gb|ACY04859.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 11/164 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L V+ACNTA L +E++ F + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLVVACNTASALALEEMQKHFK-IPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 156 >gi|261881907|gb|ACY04837.1| glutamate racemase [Helicobacter pylori] gi|261881909|gb|ACY04838.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 11/173 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + +I +++ + +EE Sbjct: 59 LAIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 I E E+ + + +V++L CTH+PLI L Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIESYFMEHFALLTP 165 >gi|296137849|ref|YP_003645092.1| glutamate racemase [Tsukamurella paurometabola DSM 20162] gi|296025983|gb|ADG76753.1| Glutamate racemase [Tsukamurella paurometabola DSM 20162] Length = 265 Score = 137 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 95/246 (38%), Gaps = 15/246 (6%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 + + DSG G + + L P+ + D PYG + + ++ + +Y Sbjct: 3 VAVIDSGFGMVNYADALSRLRPDTELVLARDPDNMPYGLLPPERISECIVAMAGAA-ARY 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 + V+ACNT + R+ F P++ +G VPAI+ A A + ++ +T A Sbjct: 62 RVDAIVVACNTGSMYALEAARARFEPAVPVIGVVPAIRPAGATGR--PFAVWATAAATVS 119 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 Y ++LI ++ H + LA ++ + + Sbjct: 120 DYQTSLIDAFADPSLAHRIPCYGLAEAIDSGDLDRVADAVA-------AAADATPPDIES 172 Query: 195 IVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 +VL CTHY L+ R + + D+ + +AR+ L R+ A+ Sbjct: 173 VVLGCTHYGLVREQIVAALRARTGVDLTVFDSPEPVARQVLRRLGVDPGGPQRLGAVVAV 232 Query: 251 FLSGKP 256 SG+P Sbjct: 233 LESGRP 238 >gi|261881911|gb|ACY04839.1| glutamate racemase [Helicobacter pylori] gi|261881913|gb|ACY04840.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 114 -ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162 >gi|261881953|gb|ACY04860.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 136 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKR-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI H Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAHQIEGYFMEHFAL 162 >gi|261881937|gb|ACY04852.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 136 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 11/164 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVANKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 114 -ILESELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 156 >gi|30959112|gb|AAO73315.1| glutamate racemase [Helicobacter pylori] Length = 184 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 72/187 (38%), Gaps = 17/187 (9%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSD 224 I E E+ + + +VI+L CTH+PLI H + + D Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAHQIEGYFMGHFALSTLPLLIHSGD 172 Query: 225 SIARRAR 231 +I + Sbjct: 173 AIVEYLQ 179 >gi|261881929|gb|ACY04848.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 11/164 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI H Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAHQIEGYF 156 >gi|261881939|gb|ACY04853.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFTLLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162 >gi|261881919|gb|ACY04843.1| glutamate racemase [Helicobacter pylori] gi|261881933|gb|ACY04850.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 11/164 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 156 >gi|261881989|gb|ACY04878.1| glutamate racemase [Helicobacter pylori] gi|261881991|gb|ACY04879.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 135 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 67/170 (39%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +++ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIRQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162 >gi|261882001|gb|ACY04884.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 135 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKSHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162 >gi|261881997|gb|ACY04882.1| glutamate racemase [Helicobacter pylori] gi|261881999|gb|ACY04883.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKSHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNTPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162 >gi|261881915|gb|ACY04841.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKEKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162 >gi|25808759|gb|AAN74506.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L V+ACNTA L +E++ F + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLVVACNTASALALEEMQKHFK-IPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155 >gi|261881943|gb|ACY04855.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 114 -ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162 >gi|261882017|gb|ACY04892.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGA-VP 109 G + +K+ + D ++ L ++ACNTA L +E++ P + +G+ + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGSSIL 59 Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 AIKQ ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 60 AIKQQVKD-KNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIESYFMEHFAL 162 >gi|261881945|gb|ACY04856.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 11/164 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +V++L CTH+PLI Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYF 156 >gi|261881957|gb|ACY04862.1| glutamate racemase [Helicobacter pylori] gi|261881959|gb|ACY04863.1| glutamate racemase [Helicobacter pylori] gi|261881963|gb|ACY04865.1| glutamate racemase [Helicobacter pylori] gi|261881965|gb|ACY04866.1| glutamate racemase [Helicobacter pylori] gi|261881967|gb|ACY04867.1| glutamate racemase [Helicobacter pylori] gi|261881969|gb|ACY04868.1| glutamate racemase [Helicobacter pylori] gi|261881971|gb|ACY04869.1| glutamate racemase [Helicobacter pylori] gi|261881973|gb|ACY04870.1| glutamate racemase [Helicobacter pylori] gi|261881977|gb|ACY04872.1| glutamate racemase [Helicobacter pylori] gi|261881979|gb|ACY04873.1| glutamate racemase [Helicobacter pylori] gi|261881983|gb|ACY04875.1| glutamate racemase [Helicobacter pylori] gi|261882005|gb|ACY04886.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162 >gi|261881935|gb|ACY04851.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNAMKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162 >gi|25808621|gb|AAN74437.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808645|gb|AAN74449.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQDY-LNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808717|gb|AAN74485.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 67/172 (38%), Gaps = 11/172 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D + +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFNPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + +I +++ + +EE Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 I E E+ + + +V++L CTH+PLI L Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIESYFMEHFALLTP 164 >gi|261881975|gb|ACY04871.1| glutamate racemase [Helicobacter pylori] gi|261881981|gb|ACY04874.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLKAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162 >gi|261882003|gb|ACY04885.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 114 -ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162 >gi|25808663|gb|AAN74458.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|261881985|gb|ACY04876.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 11/160 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +++ + D ++ L ++ACNTA L E++ + +G + Sbjct: 1 GTKDPTTIRQFGLEAL-DFFKPHKIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209 I E E+ + + +VI+L CTH+PLI H Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAHQI 152 >gi|261881987|gb|ACY04877.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D ++ L ++ACNTA L +E++ + + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + V++L CTH+PLI H Sbjct: 114 -ILEGELLETCMRYYFTPLEILPKVVILGCTHFPLIAHQIEGYFMEHFAL 162 >gi|261881941|gb|ACY04854.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162 >gi|261881931|gb|ACY04849.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 11/164 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYF 156 >gi|25808649|gb|AAN74451.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + S ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QSYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|261881961|gb|ACY04864.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D ++ L ++ACNTA TL +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASTLALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162 >gi|25808673|gb|AAN74463.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVANKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808737|gb|AAN74495.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVANKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILESELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808647|gb|AAN74450.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808749|gb|AAN74501.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +V++L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAQKIEGYF 155 >gi|261881947|gb|ACY04857.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAQKIEGYFMEHFAL 162 >gi|25808765|gb|AAN74509.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808677|gb|AAN74465.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 67/163 (41%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT+R N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIRSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYF 155 >gi|25808719|gb|AAN74486.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAQKIEGYFMEHFTL 161 >gi|261881993|gb|ACY04880.1| glutamate racemase [Helicobacter pylori] gi|261881995|gb|ACY04881.1| glutamate racemase [Helicobacter pylori] gi|261882007|gb|ACY04887.1| glutamate racemase [Helicobacter pylori] gi|261882009|gb|ACY04888.1| glutamate racemase [Helicobacter pylori] gi|261882011|gb|ACY04889.1| glutamate racemase [Helicobacter pylori] gi|261882013|gb|ACY04890.1| glutamate racemase [Helicobacter pylori] gi|261882015|gb|ACY04891.1| glutamate racemase [Helicobacter pylori] gi|261882019|gb|ACY04893.1| glutamate racemase [Helicobacter pylori] gi|261882021|gb|ACY04894.1| glutamate racemase [Helicobacter pylori] gi|261882023|gb|ACY04895.1| glutamate racemase [Helicobacter pylori] gi|261882025|gb|ACY04896.1| glutamate racemase [Helicobacter pylori] gi|261882027|gb|ACY04897.1| glutamate racemase [Helicobacter pylori] gi|261882029|gb|ACY04898.1| glutamate racemase [Helicobacter pylori] gi|261882031|gb|ACY04899.1| glutamate racemase [Helicobacter pylori] gi|261882033|gb|ACY04900.1| glutamate racemase [Helicobacter pylori] gi|261882035|gb|ACY04901.1| glutamate racemase [Helicobacter pylori] gi|261882037|gb|ACY04902.1| glutamate racemase [Helicobacter pylori] gi|261882039|gb|ACY04903.1| glutamate racemase [Helicobacter pylori] gi|261882041|gb|ACY04904.1| glutamate racemase [Helicobacter pylori] gi|261882043|gb|ACY04905.1| glutamate racemase [Helicobacter pylori] gi|261882045|gb|ACY04906.1| glutamate racemase [Helicobacter pylori] gi|261882047|gb|ACY04907.1| glutamate racemase [Helicobacter pylori] gi|261882049|gb|ACY04908.1| glutamate racemase [Helicobacter pylori] gi|261882051|gb|ACY04909.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVP 109 G + +K+ + D ++ L ++ACNTA L +E++ P + +G ++ Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSIL 59 Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 AIKQ ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 60 AIKQQVKD-KNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162 >gi|25808619|gb|AAN74436.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 11/172 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 I E E+ + + +VI+L CTH+PLI L Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFALLTP 164 >gi|25808643|gb|AAN74448.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKR-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808657|gb|AAN74455.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 11/172 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE G Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGG- 116 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 E+ + + +VI+L CTH+PLI L Sbjct: 117 ----ELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFALLTP 164 >gi|25808685|gb|AAN74469.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808751|gb|AAN74502.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808755|gb|AAN74504.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTLLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|261881949|gb|ACY04858.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 66/170 (38%), Gaps = 11/170 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAQKIEGYFMEHFAL 162 >gi|25808659|gb|AAN74456.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|261881955|gb|ACY04861.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 69/171 (40%), Gaps = 13/171 (7%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-- 110 G + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 111 --IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168 IKQ ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LSIKQQVKD-KNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN--- 113 Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 114 --ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162 >gi|25808695|gb|AAN74474.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +++ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIRQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQDY-LNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808763|gb|AAN74508.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKRQVANKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808693|gb|AAN74473.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KYSKIPIVGVIGPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAHQIEGYFMEHFTL 161 >gi|25808623|gb|AAN74438.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKR-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I + E+ + + +VI+L CTH+PLI Sbjct: 113 ILDGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808711|gb|AAN74482.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +++ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIRQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808631|gb|AAN74442.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808669|gb|AAN74461.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ ++ +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSTIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808739|gb|AAN74496.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808703|gb|AAN74478.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQDY-LNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYF 155 >gi|25808735|gb|AAN74494.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808667|gb|AAN74460.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 66/163 (40%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ ++ +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSTIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808627|gb|AAN74440.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|261881917|gb|ACY04842.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 11/164 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHEIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKQQVKDKNTPILVLGTKATIQSNAYDNALKK-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 156 >gi|25808635|gb|AAN74444.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L V+ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQLKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|261881927|gb|ACY04847.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 131 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 11/164 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + VI+L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFAPLKILPKVIILGCTHFPLIAQKIEGYF 156 >gi|25808633|gb|AAN74443.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808639|gb|AAN74446.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A + I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVANKKAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808699|gb|AAN74476.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYF 155 >gi|261881923|gb|ACY04845.1| glutamate racemase [Helicobacter pylori] gi|261881925|gb|ACY04846.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 131 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 11/164 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + VI+L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFAPLKILPKVIILGCTHFPLIARQIEGYF 156 >gi|25808761|gb|AAN74507.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFPHLKILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808727|gb|AAN74490.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAHQIEGYF 155 >gi|25808707|gb|AAN74480.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808729|gb|AAN74491.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808655|gb|AAN74454.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808715|gb|AAN74484.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT+R N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIRSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808671|gb|AAN74462.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTLLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808731|gb|AAN74492.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808713|gb|AAN74483.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPITIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808771|gb|AAN74512.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808709|gb|AAN74481.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPKVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808641|gb|AAN74447.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808725|gb|AAN74489.1| glutamate racemase [Helicobacter pylori] gi|25808757|gb|AAN74505.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808675|gb|AAN74464.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808683|gb|AAN74468.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALGEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT+R N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIRSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYLMEHFAL 161 >gi|25808697|gb|AAN74475.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808629|gb|AAN74441.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808625|gb|AAN74439.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTPIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808679|gb|AAN74466.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 66/163 (40%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + +I +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFAPLEILPEVVILGCTHFPLIAHQIEGYF 155 >gi|25808651|gb|AAN74452.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKRQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808721|gb|AAN74487.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808769|gb|AAN74511.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155 >gi|25808733|gb|AAN74493.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKRQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808687|gb|AAN74470.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 71/163 (43%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPA 110 + +K+ + D ++ L ++ACNTA L +E++ P + +G ++ A Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILA 59 Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 IKQ ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 60 IKQQVKD-KNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYF 155 >gi|25808665|gb|AAN74459.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808691|gb|AAN74472.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + S +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVSLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808705|gb|AAN74479.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 64/169 (37%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808701|gb|AAN74477.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKRQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155 >gi|25808681|gb|AAN74467.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L E++ + +G + Sbjct: 1 TKDPITIKQFGLEAL-DFFKPHKIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808689|gb|AAN74471.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 +K+ + D +Q L ++ACNTA L E++ + +G + Sbjct: 1 TKGPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALGEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMKHFTL 161 >gi|25808637|gb|AAN74445.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 66/163 (40%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + S ++ +++ + +EE Sbjct: 59 AIKRQVKDKNAPILVLGTKATIQSNAYDNALKQ-QSYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808753|gb|AAN74503.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPA 110 + +K+ + D ++ L ++ACNTA L +E++ P + +G ++ A Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIGLLIVACNTASALALEEMQKHSKIPIVGVIGPSILA 59 Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 IKQ ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 60 IKQQVKD-KNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|261881921|gb|ACY04844.1| glutamate racemase [Helicobacter pylori] Length = 167 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 65/164 (39%), Gaps = 11/164 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + +K+ + D ++ L ++ACNT L +E++ + +G + Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTVSALALEEMQ-KHSKIPIVGVIEPSI 58 Query: 113 QAAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 LAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 156 >gi|25808743|gb|AAN74498.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHEIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155 >gi|25808745|gb|AAN74499.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPA 110 + +K+ + D ++ L ++ACNTA L +E++ P + +G ++ A Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILA 59 Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 IKQ ++ I +L T AT++ + N + ++ +++ + +EE Sbjct: 60 IKQQVKD-KNAPILVLGTKATIQSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + +V++L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808767|gb|AAN74510.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHEIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNTPILVLGTKATIQSNAYDNALKK-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155 >gi|25808723|gb|AAN74488.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 128 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFAPLKILPKVIILGCTHFPLIARQIEGYF 155 >gi|25808747|gb|AAN74500.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + VI+L CTH+PLI H Sbjct: 113 ILEGELLETCMRYYFAPLKILPKVIILGCTHFPLIAHQIEGYFMEHFAL 161 >gi|25808653|gb|AAN74453.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNT L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTVSALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155 >gi|213579831|ref|ZP_03361657.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 134 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 3/130 (2%) Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 + ++C I ++ S L E G + +E+++ + E D +VL CTH+ Sbjct: 1 RFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVVLGCTHF 58 Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD-IAMR 261 PL+ Q+ P +D+ +IARR LL + A ++ P + Sbjct: 59 PLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLL 118 Query: 262 RLMQGFGLKS 271 ++Q +G ++ Sbjct: 119 PVLQRYGFET 128 >gi|25808661|gb|AAN74457.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 126 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 15/171 (8%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D +Q L ++ACNTA L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHS--YVSQCHIHLVSSMILASRVEEYACG 168 A ++ I +L T AT++ N + Y++ H +++ + +EE Sbjct: 59 AIKRQVANKNAPILVLGTKATIQSNAYDNALKQQGYLNGSH---LATSLFVPLIEE---- 111 Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 I E E+ + + VI+L CTH+PLI Sbjct: 112 -SILEGELVETCMRYYFTPFKILPGVIILGCTHFPLIAQKIEGYFMEHFAL 161 >gi|25808741|gb|AAN74497.1| glutamate racemase [Helicobacter pylori] Length = 166 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 64/163 (39%), Gaps = 11/163 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +K+ + D ++ L ++ACNT L +E++ + +G + Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTVSALALEEMQ-KHSKIPIVGVIEPSIL 58 Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A ++ I +L T AT++ N + ++ +++ + +EE Sbjct: 59 AIKRQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 I E E+ + + +VI+L CTH+PLI Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155 >gi|255532930|ref|YP_003093302.1| Asp/Glu/hydantoin racemase [Pedobacter heparinus DSM 2366] gi|255345914|gb|ACU05240.1| Asp/Glu/hydantoin racemase [Pedobacter heparinus DSM 2366] Length = 508 Score = 125 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 81/230 (35%), Gaps = 57/230 (24%) Query: 15 SILIFDSGIGGLIVLQKMRF--------------LMPE---YHFIYVADDVGFPYGN--- 54 I +FDSG GGL +L + +P+ FIY+AD PYGN Sbjct: 59 PIGVFDSGTGGLTILNTLVQFDQHNNATKFAGKDNIPDFAKEKFIYLADQANMPYGNYYS 118 Query: 55 -WEDHALKKRLMFLFSDIL---------------DKYQPVLSVIACNTAFTLIKDELRST 98 ++ L + ++ +L DK + VIACNTA K+ + Sbjct: 119 EKKNDLLVEHIIKDAQFLLSDKYYLNNTTKNYSSDKQKVKAIVIACNTATAYGKEYIEDF 178 Query: 99 FP----SMAFLGAVPAIKQ----AAAYTQSGLISILSTPATLRRTYTSNLIHS------Y 144 ++ +G + A Q ++G I + +T T+ N I + Y Sbjct: 179 IKTTGINLKVIGVIDAGAQGTLDVFKKDENGSIGVFATVGTIASKGYENTILALKDKLGY 238 Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 ++ LA V+E + D I ++ G + D Sbjct: 239 KGNLQVYNQGGYGLAEAVDE-------EPDFINRKAIAPTANYRGPKLDS 281 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 19/79 (24%) Query: 194 VIVLACTHYPLIVHVFRQL------------------SPWPVDWLDNSDSIARRARCLLP 235 +VL CTHYP ++ R++ + +D + ++A L Sbjct: 346 ALVLGCTHYPFLISDIRKILSDLYNFQKNGNFIYRTFMNKDIQIIDPAINVATELYTYLN 405 Query: 236 RINTHQTR-VFDDHALFLS 253 + + + F+S Sbjct: 406 KQHLFNPAGNMNASEFFIS 424 >gi|163838785|ref|YP_001623190.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209] gi|162952261|gb|ABY21776.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209] Length = 271 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 89/219 (40%), Gaps = 10/219 (4%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I +FD+G+G +++ +R P IY AD FPYG L + + L+ Sbjct: 9 GPIAVFDAGLGSYDIVRALRNHFPAVDLIYFADRASFPYGAKSASELFEVALRSCQY-LN 67 Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS-TPATL 132 +I N + D + + + LG +P I+ A + + + +L+ + Sbjct: 68 SLGASCVIIGSNAPSVTVLDAVAAQC-AFPVLGVLPPIQVALSSIEPTEVLLLAGAASMT 126 Query: 133 RRTYTSNLIHSYVSQ--CHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188 + + I+ Q + ++ L VE ++ + + ++ +E Sbjct: 127 QSQQLQDFINREAGQQAWRVQTAAATKLIDLVESGQFVADPSGTVALVAEFLDQ--QRRE 184 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 G+ + L+ TH P + F++ +P + + +DS+A Sbjct: 185 GQTIGGVTLSSTHLPWLSFAFKEAAP-NLQLFNPADSVA 222 >gi|91200741|emb|CAJ73793.1| hypothetical protein kuste3038 [Candidatus Kuenenia stuttgartiensis] Length = 916 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 106/287 (36%), Gaps = 50/287 (17%) Query: 1 MKIDNYPCEK-KLQNS--ILIFDSGIGGLIVLQKMRFLMP--EYHFIYVADDVGFPYGNW 55 M+ N P +K K + I IFDSG GG+IV +K+ ++P + D FP+G Sbjct: 542 MEAKNAPQKKMKDKKPLIIGIFDSGQGGIIVTEKLNRILPVGNIKLLLFTDKANFPFGQK 601 Query: 56 EDHALKKRLMFLFSDILDKYQPV--------------------------------LSVIA 83 + +I ++ + + + A Sbjct: 602 SKEEINDITFRAVHEINERCKTMHQSNGFFYRFIYNTPYFLKTVFIWLGIIPRDVIVCFA 661 Query: 84 CNTAFTLIKDE-LRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141 CNT T++ + LR FP + F+G + + A + I I+ T T++ I Sbjct: 662 CNTVDTMVNHKKLRIRFPHIQFIGPVKKTLLKINALPKDARIGIIGTVGTIKSGIYEKRI 721 Query: 142 HSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGC----FIEKEGKR-TD 193 + H+ + +LA E + + + K+ E K E K Sbjct: 722 RE--AGYHVLAKPTPLLAVLSEMLYKKSFDTEEKQKEFYKTARDLIYVNLKEFIKKNTIS 779 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + LACTHY + + L V+++ +++ + ++ +I Sbjct: 780 HLCLACTHYDYLKSTLKDLFGE-VEFISTVETVIEEVQDIINQIPLQ 825 >gi|318076535|ref|ZP_07983867.1| glutamate racemase [Streptomyces sp. SA3_actF] Length = 136 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 4/137 (2%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L +R L P+ + +D P+G + RL ++ Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAAL 61 Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134 +P V+ACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTGS 119 Query: 135 TYTSNLIHSYVSQCHIH 151 Y LI + ++ Sbjct: 120 EYQRRLIAEFAPGGNVT 136 >gi|207110490|ref|ZP_03244652.1| glutamate racemase [Helicobacter pylori HPKX_438_CA4C1] Length = 87 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I +FDSG+GG VL+ + IY D PYG + +K+ + D + Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61 Query: 76 QPVLSVIACNTAFTLIKDELRST 98 Q L ++ACNTA L +E++ Sbjct: 62 QIELLIVACNTASALALEEMQKH 84 >gi|227873306|ref|ZP_03991571.1| possible glutamate racemase [Oribacterium sinus F0268] gi|227840873|gb|EEJ51238.1| possible glutamate racemase [Oribacterium sinus F0268] Length = 144 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 56/142 (39%), Gaps = 7/142 (4%) Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 ++T T++ LI + L+ S + +E K E++ + + Sbjct: 1 MATEHTIQGERLHQLISRFGDPSQFLLLPSPGIVRLLEAG----KGDSPEMEDYLHQLLL 56 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 + + IVL CTH+P + ++ P+PV + D ++ A+ R L + V Sbjct: 57 PYQKEAISSIVLGCTHFPFVKEQIQKALPYPVQFFDGAEGTAKETRHRLEERGLLKEGVQ 116 Query: 246 DDHALFLSGKPDIAMRRLMQGF 267 + S D + LM+ F Sbjct: 117 KGEVVLFSSNEDSS---LMEAF 135 >gi|213850149|ref|ZP_03381047.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 130 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 3/126 (2%) Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 +C I ++ S L E G + +E+++ + E D +VL CTH+PL+ Sbjct: 1 ECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVVLGCTHFPLLR 58 Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD-IAMRRLMQ 265 Q+ P +D+ +IARR LL + A ++ P + ++Q Sbjct: 59 DELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQ 118 Query: 266 GFGLKS 271 +G ++ Sbjct: 119 RYGFET 124 >gi|46205905|ref|ZP_00210084.1| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1] Length = 132 Score = 121 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 6/125 (4%) Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 + + VE+ E+ + + D +VL CTHYPL+ Sbjct: 3 PGLTLTTQACPEFVPLVEQGVTSGP----EVLEVAHRYLDPVKAAGVDTLVLGCTHYPLL 58 Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHALFLSGKPDIAMRRL 263 + V + +++ A+ L + ++R H +G + Sbjct: 59 TGAISYVMGDEVTLVSSAEETAKDVYRTLVAHDLERSRDAGPPRHRFLATGSAEPFEHLA 118 Query: 264 MQGFG 268 + G Sbjct: 119 RRFLG 123 >gi|284051284|ref|ZP_06381494.1| glutamate racemase [Arthrospira platensis str. Paraca] Length = 76 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73 I IFDSG+GGL VL+++ +P +Y AD PYG + + + + + + Sbjct: 8 QKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITWAVA 67 Query: 74 KYQPVLSVIA 83 + + ++A Sbjct: 68 Q-DVKMVLMA 76 >gi|76800015|ref|ZP_00781954.1| Glutamate racemase [Streptococcus agalactiae 18RS21] gi|77412358|ref|ZP_00788669.1| glutamate racemase [Streptococcus agalactiae CJB111] gi|76584668|gb|EAO61451.1| Glutamate racemase [Streptococcus agalactiae 18RS21] gi|77161578|gb|EAO72578.1| glutamate racemase [Streptococcus agalactiae CJB111] Length = 109 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 3/99 (3%) Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + KK + GK D ++L CTHYPL+ + + + V +D+ R Sbjct: 1 MSSSLAKKVVYETLSPLVGK-LDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDI 59 Query: 231 RCLLPR--INTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 LL IN + H + + P Q Sbjct: 60 SVLLNYFEINHNWQNKHGGHHFYTTASPKGFKEIAEQWL 98 >gi|169840381|ref|ZP_02873569.1| glutamate racemase [candidate division TM7 single-cell isolate TM7a] Length = 92 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 + A T++G I ++ T AT++ I + + + + + VEE K Sbjct: 4 ARTAIEATKNGKIGVIGTKATIQSGKYEEEIKLFNKKVEVLQKACPLFVPAVEEGILSGK 63 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 + + + I+ + +GK D ++L CTHY Sbjct: 64 L----VNQIIKTYLDDFKGK-VDTLILGCTHY 90 >gi|213861499|ref|ZP_03385969.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 84 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+ Sbjct: 2 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 60 Query: 133 RRTYTSNLIHSYVSQCHIHLVSS 155 +R+YT LI + ++C I ++ S Sbjct: 61 KRSYTHELIARFANECQIEMLGS 83 >gi|309807427|ref|ZP_07701390.1| glutamate racemase domain protein [Lactobacillus iners LactinV 01V1-a] gi|308169349|gb|EFO71404.1| glutamate racemase domain protein [Lactobacillus iners LactinV 01V1-a] Length = 94 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 8/80 (10%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62 +DN P I I DSG+GGL VL+K+ +P I++ D PYG+ + Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52 Query: 63 RLMFLFSDILDKYQPVLSVI 82 +L K V+ ++ Sbjct: 53 LTRASVKFLLTKNVKVIILV 72 >gi|213421905|ref|ZP_03354971.1| glutamate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 109 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 3/105 (2%) Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 G + +E+++ + E D +VL CTH+PL+ Q+ P +D+ +IA Sbjct: 1 GDSVSLEELRRILRPWLRMPEP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIA 58 Query: 228 RRARCLLPRINTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 RR LL + A ++ P + ++Q +G ++ Sbjct: 59 RRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 103 >gi|225010451|ref|ZP_03700922.1| glutamate racemase [Flavobacteria bacterium MS024-3C] gi|225005280|gb|EEG43231.1| glutamate racemase [Flavobacteria bacterium MS024-3C] Length = 143 Score = 99.2 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 51/131 (38%), Gaps = 17/131 (12%) Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 I L + +E G +E+ + ++ + + K D +VL CTHYP + Sbjct: 3 GGVEIIEQEGTGLVALIE----GGFADGEEVAEVLKSYLLPMQEKGIDRLVLGCTHYPYL 58 Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-------------HALFL 252 + +++ ++ +D + ++A++ + +L + + + + Sbjct: 59 IPAIKKILSSRIEIIDAAGAVAKQTKKVLEKEGLLVRETVTEELTANDLISKAASYEFYS 118 Query: 253 SGKPDIAMRRL 263 +G D+ L Sbjct: 119 NGATDVLKSFL 129 >gi|298254740|ref|ZP_06978326.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19A] Length = 92 Score = 96.6 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 6/96 (6%) Query: 106 GAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 G + P A +Q G I ++ TP T++ IH + ++ A VE Sbjct: 2 GVILPGASAAIKSSQGGKIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVES 61 Query: 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 A + + + + + + D ++L CT Sbjct: 62 GALSTSVTKKVVYETLRPLV-----GKVDSLILGCT 92 >gi|332756498|gb|EGJ86849.1| hypothetical protein SF274771_2973 [Shigella flexneri 2747-71] Length = 161 Score = 95.4 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 4/138 (2%) Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + I++T T++ LI S ++ S LA +EE ++IKK + Sbjct: 7 KNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHV 66 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 I I+L CTHYP++ + F ++P + +++ + A + L ++N Sbjct: 67 -NHLISLHPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAHDQAISIKNHLGQLNLL 122 Query: 241 QTRVFDDHALFLSGKPDI 258 + + SG +I Sbjct: 123 NSSNIGTLQINTSGSMEI 140 >gi|309807437|ref|ZP_07701400.1| glutamate racemase family protein [Lactobacillus iners LactinV 01V1-a] gi|308169359|gb|EFO71414.1| glutamate racemase family protein [Lactobacillus iners LactinV 01V1-a] Length = 88 Score = 95.0 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250 + D ++L CTHYPL++ + +D +D +A+ +L R N + H Sbjct: 2 QYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLAEK-GGKHEY 60 Query: 251 FLSGKPDIAMRRLMQG 266 + +G P M+ + Sbjct: 61 YTTGDPIKFMKIAQKW 76 >gi|293596522|ref|ZP_06684240.1| glutamate racemase [Listeria monocytogenes J2818] gi|293589868|gb|EFF98202.1| glutamate racemase [Listeria monocytogenes J2818] Length = 88 Score = 94.2 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 1/73 (1%) Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSG 254 +L CTHYPL+ + V +++ + A LL N + +H F +G Sbjct: 2 ILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRFFTTG 61 Query: 255 KPDIAMRRLMQGF 267 I Sbjct: 62 STQIFKDIAKDWL 74 >gi|298254739|ref|ZP_06978325.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19A] Length = 86 Score = 92.7 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 2/74 (2%) Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALFLS 253 +L CTHYPL+ + + + V +D+ R LL ++ R H + + Sbjct: 2 ILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRFYTT 61 Query: 254 GKPDIAMRRLMQGF 267 + + Sbjct: 62 ASSQSFAQIGEEWL 75 >gi|241758577|ref|ZP_04756692.1| glutamate racemase [Neisseria flavescens SK114] gi|241321229|gb|EER57401.1| glutamate racemase [Neisseria flavescens SK114] Length = 185 Score = 91.9 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 47/105 (44%), Gaps = 7/105 (6%) Query: 164 EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 E G ++ + + ++ F + D +VL CTH+PL+ + + + V +D++ Sbjct: 73 EGWLGHEVTRLTVCEYLKPLFAD----GIDTLVLGCTHFPLLKPLIGREAG-NVALVDSA 127 Query: 224 DSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGF 267 ++A +L + T D+ ++S P + R + + F Sbjct: 128 ITMAEETARVLAQEGLLNTDNNNPDYRFYVSDIP-LKFRIIGERF 171 >gi|225075495|ref|ZP_03718694.1| hypothetical protein NEIFLAOT_00503 [Neisseria flavescens NRL30031/H210] gi|224953130|gb|EEG34339.1| hypothetical protein NEIFLAOT_00503 [Neisseria flavescens NRL30031/H210] Length = 115 Score = 91.9 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 42/107 (39%), Gaps = 6/107 (5%) Query: 163 EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 EE ++ + + ++ + D +VL CTH+PL+ + + + V +D+ Sbjct: 2 EEGWLEHEVTRLTVCEYLKPLLAD----GIDTLVLGCTHFPLLKPLIGREA-HNVALVDS 56 Query: 223 SDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268 + + A +L + T D+ ++S P + G Sbjct: 57 AITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 103 >gi|255022683|ref|ZP_05294669.1| glutamate racemase [Listeria monocytogenes FSL J1-208] Length = 44 Score = 91.9 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW 55 ++ +I DSG+GGL V++++ +P Y+ D PYG Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPR 44 >gi|7671531|emb|CAB89281.1| hypothetical protein [Clostridium cellulolyticum H10] Length = 125 Score = 85.0 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 4/103 (3%) Query: 150 IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209 + + L E + IKK+++G + VL CTH+P+ ++ F Sbjct: 5 VDYLPFPELVELAENMVFDYEKVIPVIKKKLDGYNL----NNYKTFVLGCTHFPIYINAF 60 Query: 210 RQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 +++ P +D +D S+ R + LL + T + + +F Sbjct: 61 KEVLPPFIDIIDGSEGTIRYLKLLLEERHLISTNINGGNIVFF 103 >gi|325128800|gb|EGC51661.1| glutamate racemase 1 [Neisseria meningitidis N1568] Length = 94 Score = 83.5 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVF 245 D +VL CTH+PL+ + + + V +D++ + A +L + T Sbjct: 1 MLADGIDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNN 59 Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268 D+ ++S P + G Sbjct: 60 PDYRFYVSDIPLKFRTIGERFLG 82 >gi|167741430|ref|ZP_02414204.1| glutamate racemase [Burkholderia pseudomallei 14] Length = 113 Score = 83.5 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 3/92 (3%) Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 D +VL CTHYP + R ++ + +D D+IAR+ +L Sbjct: 2 YLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERGLRAP 61 Query: 243 ---RVFDDHALFLSGKPDIAMRRLMQGFGLKS 271 R + GL + Sbjct: 62 ASLRPAPLPRFCSTSDGRQLQALAATLLGLDA 93 >gi|326392486|ref|ZP_08213869.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200] gi|325991473|gb|EGD50082.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200] Length = 96 Score = 82.7 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + + + VIACNT +I +S + + F + AA YT + I ++T T Sbjct: 1 MREQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGAIATTRT 57 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY 165 + I ++ + +E+ Sbjct: 58 VESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKG 91 >gi|238761263|ref|ZP_04622240.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638] gi|238761516|ref|ZP_04622492.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638] gi|238700490|gb|EEP93231.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638] gi|238700743|gb|EEP93483.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638] Length = 182 Score = 82.3 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Query: 98 TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSM 156 S+ +G +P +K A +++ I+IL + + +I + + +C ++ V++ Sbjct: 6 KLASLPVIGILPPVKDACLNSKTKKIAILGVRSMVESPELKRYIIENTIEECDVYGVNAS 65 Query: 157 ILASRVEEYAC--GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 L + VE+++ + + + +E DVI L+ TH P + F P Sbjct: 66 ELVNLVEDFSFRNDKEKTQQSVSLFLEKLLEIY--PNIDVITLSSTHLPWLKEFFLNAQP 123 Query: 215 WPVDWLDNSDSI 226 + +LD SD + Sbjct: 124 -HIIFLDPSDKV 134 >gi|325475083|gb|EGC78269.1| Asp/Glu/Hydantoin family Racemase [Treponema denticola F0402] Length = 224 Score = 81.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 68/171 (39%), Gaps = 8/171 (4%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115 AL+ + ++ + K + VI CN+ + I E ++ + K+ A Sbjct: 36 SQEALENLFIKNSNEAIKKGA-DIIVIYCNSLSSAIDYEKIQRLLNIQIFSPLDTYKKLA 94 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 ++ I+IL+ L +I Y + + + +M + +E +I + Sbjct: 95 DDCKN--IAILAANG-LAAYTIDKIIQKYNREKNTIPIGNMSIVQLIENGLPPAEIIKLL 151 Query: 176 IKKEIEGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224 K IE + D ++L CTH+P I + ++ + + +D ++ Sbjct: 152 NLKGFLSYLENIEISEYKIDSLMLGCTHFPYIKNELQKHT--SIRIVDPAE 200 >gi|304440381|ref|ZP_07400270.1| Asp/Glu/Hydantoin family racemase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371133|gb|EFM24750.1| Asp/Glu/Hydantoin family racemase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 215 Score = 80.4 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 67/174 (38%), Gaps = 9/174 (5%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114 L + D + + + CN+ I LR T M + + K Sbjct: 46 SVEELTNIVKEKIEDAKENGAEKIFIY-CNSLSVAIDLKYLRET-TGMEIITPIDVYKNL 103 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 ++ I+I++ A + + + I +I + ++ L +E+ +I + Sbjct: 104 DKKYKN--IAIIA--ANSKSAFKIDQILCEEEFRNIVAIGNLTLVEAIEDKLNPEEIIKL 159 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++ F + ++ D+I+L CTH+P I +L+ + LD + + + Sbjct: 160 LALDKLADYFNNIKREKLDLIILGCTHFPYIKEELERLT--DIKILDPAAEMIK 211 >gi|42527702|ref|NP_972800.1| racemase [Treponema denticola ATCC 35405] gi|41818530|gb|AAS12719.1| racemase, Asp/Glu/Hydantoin family [Treponema denticola ATCC 35405] Length = 224 Score = 80.4 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 67/171 (39%), Gaps = 8/171 (4%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115 AL+ + ++ + K + VI CN+ + I E ++ + K+ Sbjct: 36 SQEALENLFIKNSNEAIKKGA-DIIVIYCNSLSSAIDYEKIQRLLNIQIFSPLDTYKKLT 94 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 ++ I+IL+ L +I Y + + + +M + +E +I + Sbjct: 95 DDCKN--IAILAANG-LAAYTIDKIIQKYNREKNTIPIGNMSIVQLIENGLPPAEIIKLL 151 Query: 176 IKKEIEGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224 K IE + D ++L CTH+P I + ++ + + +D ++ Sbjct: 152 NLKGFLSYLENIEINDYKIDSLMLGCTHFPYIKNELQKHT--SIRIVDPAE 200 >gi|330819549|ref|YP_004348411.1| Aspartate racemase [Burkholderia gladioli BSR3] gi|327371544|gb|AEA62899.1| Aspartate racemase [Burkholderia gladioli BSR3] Length = 504 Score = 76.5 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 77/212 (36%), Gaps = 28/212 (13%) Query: 29 LQKMRFLMPEYHFIYVAD-DVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 L+ + P+ D G D + ++ L++ L I CNTA Sbjct: 282 LKLIVEQNPQIP-----DRTAHL-VGEGPDPTV---SLYAACKRLEQGGAKLVAIPCNTA 332 Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLRRTYTSNLIHSYV 145 + + ++ S+ + + + ++ I +L+T TL + Sbjct: 333 HAFV-ERIQPRL-SIPIVNMLTVTARHLRERFPEAREIGVLATSGTLASGVYREAL---A 387 Query: 146 SQCHIHLVSSMILASRV------EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 ++ + LV L +RV E ++ +++IE V++L C Sbjct: 388 AEGFVQLVPPPALQARVMAAIYGEAGVKAGFVQGRC-REDIEAALDALVAAGARVVLLGC 446 Query: 200 THYPLIVHVFRQLSPWP---VDWLDNSDSIAR 228 T PL++ +++ V +D ++ +AR Sbjct: 447 TELPLLLPA-GEIAGPGGARVSLVDPTEVLAR 477 >gi|306820339|ref|ZP_07453978.1| Asp/Glu/Hydantoin family racemase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551668|gb|EFM39620.1| Asp/Glu/Hydantoin family racemase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 216 Score = 75.4 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 66/177 (37%), Gaps = 8/177 (4%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115 L + + + CN+ + + E + ++ + + K Sbjct: 46 SKDELYDLFYSTCEKAIKLGAAKIFLY-CNSLSSSVDYEKVAKSLNIEIITPLETYKSLP 104 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 +Y ++ ++ + + N+IH Y + + +M + +E+ +I E+ Sbjct: 105 SYCKN---IVILSANGVSAYNIDNIIHKYNKDVNTISIGNMSIVESIEDKKSPRQIMEEL 161 Query: 176 IKKEIEGCFIEKEGKR--TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + + TD ++L CTH+P + + L+ ++ +D +D + RR Sbjct: 162 NLEGFIKYLENINHPKYKTDTLILGCTHFPYLKKEIKLLT--TLNIIDTNDDMIRRL 216 >gi|167040409|ref|YP_001663394.1| Asp/Glu racemase [Thermoanaerobacter sp. X514] gi|256752253|ref|ZP_05493116.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus CCSD1] gi|300914493|ref|ZP_07131809.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X561] gi|307724271|ref|YP_003904022.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X513] gi|166854649|gb|ABY93058.1| Asp/Glu racemase [Thermoanaerobacter sp. X514] gi|256748821|gb|EEU61862.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus CCSD1] gi|300889428|gb|EFK84574.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X561] gi|307581332|gb|ADN54731.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X513] Length = 217 Score = 75.4 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 20/174 (11%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114 + AL ++++ + D K +I CN+ I + ++ +P P Sbjct: 51 KPDALTQKVISIIGDF-QKQNIRKVMIYCNSLSAAIDLELVKQKYPDTNI--VTPLQVYH 107 Query: 115 AAYTQSGLISILSTPA----TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 + ++ + IL+ T+ + + N I V+++ + +E ++ Sbjct: 108 SLASRYKRLVILAANGQSLKTIEKIFYEN-----NPTIQIIGVTTLPVIRAIE----NLE 158 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224 I E I K + K + +VL CTH P + Q V +D ++ Sbjct: 159 IPEIIIDKFNLADLVPKNF-NAEGLVLGCTHLPYLKEKLEQKL--NVPIIDPAE 209 >gi|167037747|ref|YP_001665325.1| Asp/Glu racemase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116162|ref|YP_004186321.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856581|gb|ABY94989.1| Asp/Glu racemase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929253|gb|ADV79938.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 217 Score = 75.4 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 20/174 (11%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114 + AL ++++ + D K +I CN+ I + ++ +P P Sbjct: 51 KPDALTQKVISIIGDF-QKQNIRKVMIYCNSLSAAIDLELVKQKYPDTNI--VTPLQVYH 107 Query: 115 AAYTQSGLISILSTPA----TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 + ++ + IL+ T+ + + N I V+++ + +E ++ Sbjct: 108 SLASRYKRLVILAANGQSLKTIEKIFYEN-----NPTIQIIGVTTLPVIRAIE----NLE 158 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224 I E I K + K + +VL CTH P + Q V +D ++ Sbjct: 159 IPEIIIDKFNLADLVPKNF-NAEGLVLGCTHLPYLKEKLEQKL--NVPIIDPAE 209 >gi|168185453|ref|ZP_02620088.1| aspartate racemase [Clostridium botulinum C str. Eklund] gi|169296186|gb|EDS78319.1| aspartate racemase [Clostridium botulinum C str. Eklund] Length = 252 Score = 74.6 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 10/186 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + ++ CNTA D+++ ++ F+ + K I +L+T Sbjct: 72 LKLMGADIIIMPCNTA-HFFLDKIQKVV-NIPFINMIDEVAKYILNICSDKRIGLLATQG 129 Query: 131 TLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T + +Y I+ + + G+K ++ + ++ E + Sbjct: 130 TYKGKVYETCFKNYNIDVITPREKYKDIILDLIYQVKKGVKSFDESL---VKRILKEFKD 186 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 K IVL CT P++ + R ++ ++D +AR + R + RV + Sbjct: 187 KNIKTIVLGCTELPILFNDIRFNELKDFRFISSTDILARET---VKRALELERRVSYERN 243 Query: 250 LFLSGK 255 + Sbjct: 244 KCTTDN 249 >gi|206895393|ref|YP_002246837.1| glutamate racemase, putative [Coprothermobacter proteolyticus DSM 5265] gi|206738010|gb|ACI17088.1| glutamate racemase, putative [Coprothermobacter proteolyticus DSM 5265] Length = 268 Score = 73.4 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 69/199 (34%), Gaps = 35/199 (17%) Query: 17 LIFDSGIGG----LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72 L++DSGIGG L ++ + ++ AD + FP G + L L F Sbjct: 19 LVYDSGIGGAWFSL----ELLRRKKAHRVVFYADTLNFPLGLKSETELYNILDQFFGYAS 74 Query: 73 DKYQPVLSV-----IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS--- 124 V +ACNT ++ +P P + +GLI Sbjct: 75 VAATKPAEVFDGIFLACNTISSVYLRY----WPVFKKKVPFPIVH--TYAYHNGLIGLPK 128 Query: 125 --ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 IL+T AT+R + + + + + ++ +E K ++ Sbjct: 129 PLILATEATVRARIYTY----FTAGRGVEMPAT----DLIEALQQD---DTQRAKGLVKQ 177 Query: 183 CFIEKEGKRTDVIVLACTH 201 +R +VL CTH Sbjct: 178 TATFARKERFSHVVLGCTH 196 >gi|309388341|gb|ADO76221.1| Asp/Glu/hydantoin racemase [Halanaerobium praevalens DSM 2228] Length = 219 Score = 73.4 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 59/180 (32%), Gaps = 13/180 (7%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + + + + L + +I CN+ ++ + ++ + P Sbjct: 53 PKKLEEI---TLEKIEN-LKIKEAEYIIIYCNSLSAVLDKKKLEKLSAIRII--TPLDIY 106 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 I+IL+ + + + + + + +E+ I + Sbjct: 107 KNLVIDKKRIAILA-ANSQSAAKIEKMFMQKNPKLEYVSAGILPIVNYIEQRVDPATIVK 165 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 + EI F + E + VL CTH+P + ++ P ++ + I R+ + Sbjct: 166 EYGLLEIISSFKKMEIAKI---VLGCTHFPYLEKEIMKIFPE---IINPAQEIVRQIKNY 219 >gi|187921369|ref|YP_001890401.1| aspartate racemase [Burkholderia phytofirmans PsJN] gi|187719807|gb|ACD21030.1| aspartate racemase [Burkholderia phytofirmans PsJN] Length = 497 Score = 73.1 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 19/191 (9%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+ D + ++ L+ L I CNTA ++ + S+ + + Sbjct: 298 GDGPDPTI---SLYATCKKLESGDADLIAIPCNTAHAFVERI--QPYLSIPIVNMLTVTV 352 Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 + T + +L+T T+ + S + V L +RV E G K Sbjct: 353 RHLRETYPALRSVGVLATSGTIASGVYEKALESEGLR---QTVPRAELQARVMEAIYGNK 409 Query: 171 -----IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDN 222 + +I + +VI+L CT PL++ + V +D Sbjct: 410 GVKAGFTTGQCLDDISAAIDGLVAEGVEVIILGCTELPLLLPK-QSFVGTTGARVSLVDP 468 Query: 223 SDSIARRARCL 233 +D +AR+ L Sbjct: 469 TDVLARQCVIL 479 >gi|307264783|ref|ZP_07546345.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter wiegelii Rt8.B1] gi|326389915|ref|ZP_08211478.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200] gi|306920041|gb|EFN50253.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter wiegelii Rt8.B1] gi|325993975|gb|EGD52404.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200] Length = 216 Score = 72.7 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 62/172 (36%), Gaps = 14/172 (8%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114 + L ++++ + D K +I CN+ I + ++ +P P Sbjct: 51 KPDVLTQKVISIIGDF-KKENIKKIMIYCNSLSAAIDLELVKQKYPDTNI--VTPLQVYH 107 Query: 115 AAYTQSGLISILSTPATLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 + ++ + I + A + + + I ++ + + +E + +I E Sbjct: 108 SVASKYNRLVIWA--ANSQSLEAIEKIFYENNPLVQIIGITMLPIIRAIENF----EIPE 161 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 I+K + K D IVL CTH P + + + +D ++ Sbjct: 162 VIIEKFSLADLVPKNF-NADGIVLGCTHLPYLKEKLAEKL--NMHIIDPAEE 210 >gi|224826368|ref|ZP_03699470.1| aspartate racemase [Lutiella nitroferrum 2002] gi|224601469|gb|EEG07650.1| aspartate racemase [Lutiella nitroferrum 2002] Length = 476 Score = 71.9 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 18/181 (9%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-- 121 + L+ I CNTA + + + + + SG Sbjct: 299 ALLATCQRLEADGAKAIAIPCNTAHAFVAAI--QPYLTTPIVNMLTETIAHIRTRYSGDK 356 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS-MILASRVEE---YACGIK--IKEDE 175 + +L+T T++ Q I L++ +V CG+K E E Sbjct: 357 PVGLLATAGTVQSRVYHAA----AEQAGIRLIAPEPPFQDKVMNAIYGECGVKAGFTEGE 412 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLI---VHVFRQLSPWPVDWLDNSDSIARRARC 232 K ++ ++++L CT PL+ H +L V +D +D +ARR Sbjct: 413 SKTDLLAAAEHLAQAGAEILILGCTELPLLFPQSHEI-ELDGRTVALIDPTDILARRCVQ 471 Query: 233 L 233 L Sbjct: 472 L 472 >gi|323529527|ref|YP_004231679.1| aspartate racemase [Burkholderia sp. CCGE1001] gi|323386529|gb|ADX58619.1| aspartate racemase [Burkholderia sp. CCGE1001] Length = 487 Score = 71.5 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 16/176 (9%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY-TQSG 121 ++ L++ + I CNTA ++ + + + + ++ + Sbjct: 306 SLYATCKRLEEGGADIIAIPCNTAHAFVERI--QPYLRVPIVNMLTETVRYVHEHYPAQR 363 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-----IKEDEI 176 I +L+T T+ + + Q + L SRV + G + Sbjct: 364 KIGVLATSGTMASGVYEKALEAQGLQ---QIAPEPALQSRVMQAIYGKQGVKAGFTAGAC 420 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARR 229 +I + +VIVL CT PL++ + V +D + +ARR Sbjct: 421 HDDIAAAVEGLIDEGVEVIVLGCTELPLLLPH-AEFVGSGGARVTLIDPTHVLARR 475 >gi|299143380|ref|ZP_07036460.1| racemase, Asp/Glu/Hydantoin family [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517865|gb|EFI41604.1| racemase, Asp/Glu/Hydantoin family [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 218 Score = 70.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 10/172 (5%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115 L+ + +DK L I CN+ I + + + + K Sbjct: 48 SKEELENLFIEKAKSAIDKGADKLL-INCNSLSCAIDYKKIEELIKLEIITPLETYKSLP 106 Query: 116 AYTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 + I+I+ YT +I + V +M + +E +I E Sbjct: 107 KGCNN--IAIIGANGL--SAYTIDKIIKESDETKNTISVGNMSIVQMIEAGFTPKEIVEG 162 Query: 175 EIKKEIEGCFIEKE--GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224 + + D I+L CTH+P I ++ + + +D ++ Sbjct: 163 LNLDGFLNYLENIKIGKYKVDSIILGCTHFPYIRDELKKRT--SLIIIDPAE 212 >gi|28210162|ref|NP_781106.1| putative glutamate racemase [Clostridium tetani E88] gi|28202598|gb|AAO35043.1| putative glutamate racemase [Clostridium tetani E88] Length = 212 Score = 70.4 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 68/176 (38%), Gaps = 13/176 (7%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAF-TLIKDELRSTFPSMAFLGAVPAIKQAA 115 L++ ++ + + + + I CN+ + D+L+ + + + P Sbjct: 47 PDRLREMVIEKIKE-IKREKIKNIYIHCNSLSGAVDMDKLKEEY-EINII--TPLQIYRE 102 Query: 116 AYTQSGLISILSTPATLRRTY-TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 Q I +L+ A + T+ I + ++ + + L + +E+ I ED Sbjct: 103 MANQFDTIGVLA--ANNQSTFGIERTIQEVNPKAYVIGIGILPLVNAIEKSLPVKDIVED 160 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 ++ FI+ + I+L CTH+P + + + +D + + ++ Sbjct: 161 FALEKTIEFFIK---NNCEAIILGCTHFPYLYKELQAK--SFIKIIDPAMEMIKKL 211 >gi|91782822|ref|YP_558028.1| aspartate racemase [Burkholderia xenovorans LB400] gi|91686776|gb|ABE29976.1| Aspartate racemase [Burkholderia xenovorans LB400] Length = 518 Score = 69.6 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 8/176 (4%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122 ++ L+ L I CNTA + + ++ + + + + T GL Sbjct: 301 ALYAACRTLEDGGADLIAIPCNTAHAFV-ERIQPSL-GIPIVNMLTCTADYLRETFPGLR 358 Query: 123 -ISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRV-EEYACGIKIKEDEIKKE 179 I +L+T TL + + Q + L V E + + Sbjct: 359 EIGVLATTGTLASRVYEQSLEARGFVQIVPGEQAQARLMHAVYGPKGAKAGFTSGECRDD 418 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIV--HVFRQLSPWPVDWLDNSDSIARRARCL 233 + + + VIVL CT PL++ + V +D ++ +A+R Sbjct: 419 LAAAVDDLIAQGVQVIVLGCTELPLLLRDAALACAAGRVVRLVDPTEVLAKRCVAY 474 >gi|259046771|ref|ZP_05737172.1| glutamate racemase [Granulicatella adiacens ATCC 49175] gi|259036539|gb|EEW37794.1| glutamate racemase [Granulicatella adiacens ATCC 49175] Length = 223 Score = 69.6 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 73/189 (38%), Gaps = 22/189 (11%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114 ED ++ + + + + K + CN+ +++ D L+ + +P I Sbjct: 47 EDEEREQYIRNVINGL--KNDIDAVFVYCNSLSSVVNFDSLQEEYR-------LPMITPM 97 Query: 115 AAYTQSGL----ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 Y G+ +++++ + +NL + + V+ + L +E K Sbjct: 98 QMYRTLGVEHDYLAVMAANSHGLTGVENNLYIA-NPNLKVFGVTMLELVKAIETG----K 152 Query: 171 IKEDEIKKE-IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +E+ IK+ + F E + +VL CTH+P + QL + +D + R Sbjct: 153 PEEEIIKQFDFQSLFHYFESTEIEAVVLGCTHFPYVKSELEQL--SNIPIIDVGVYMIDR 210 Query: 230 ARCLLPRIN 238 + + N Sbjct: 211 LKSHIQEEN 219 >gi|330904118|gb|EGH34690.1| glutamate racemase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 44 Score = 69.6 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 16/34 (47%), Positives = 23/34 (67%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVAD 46 + IFDSG+GGL VL ++R L+P +Y+AD Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLAD 44 >gi|312796799|ref|YP_004029721.1| aspartate racemase [Burkholderia rhizoxinica HKI 454] gi|312168574|emb|CBW75577.1| Aspartate racemase (EC 5.1.1.13) [Burkholderia rhizoxinica HKI 454] Length = 253 Score = 69.2 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 42/176 (23%) Query: 72 LDKYQPVLSVIACNTA------FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125 L + IACNTA F + F+ + A + A + +G + Sbjct: 78 LARAGCGAVAIACNTAHYWCDEFAAALR--------IPFIDMISATARQTALSGAGSAIV 129 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--------EYACGIKIKEDEIK 177 L T +T+R + + + +HL+ VE A + ++ Sbjct: 130 LGTRSTIRYRLYDHAL----NDAGVHLIEPDD--EIVELTSAAISLSKAGDLPGASAQLA 183 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHV-FRQLSPWPVDWLDN----SDSIAR 228 + + C D ++L CT P++V R + +D+ +++ + Sbjct: 184 RSLAAC----GALHADAVILGCTELPMVVPAGIR-----GIHLIDSVSCLAEACVQ 230 >gi|238023769|ref|YP_002908001.1| Aspartate racemase [Burkholderia glumae BGR1] gi|237878434|gb|ACR30766.1| Aspartate racemase [Burkholderia glumae BGR1] Length = 509 Score = 68.8 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 75/207 (36%), Gaps = 18/207 (8%) Query: 29 LQKMRFLMPEYHFIYVAD-DVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 L+ + P+ D G+ D + ++ L++ L I CNTA Sbjct: 293 LKVLVEQNPQIP-----DRTAHL-IGDGPDPTV---SLYAACKRLEQGGADLVAIPCNTA 343 Query: 88 FTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS-- 143 ++ + + V A + + + +L+T TL + + + Sbjct: 344 HAFVERI--QPHLGIPIINMLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAEG 401 Query: 144 YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP 203 + Q + + ++A+ ++ E +++I V++L CT P Sbjct: 402 FAQQVPPPALQARVMAAIYGKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELP 461 Query: 204 LIVHVFRQLSPWPVD--WLDNSDSIAR 228 L++ + ++P +D ++ +A+ Sbjct: 462 LLLPMADYVAPDGAHAVLVDPTEVLAK 488 >gi|260583752|ref|ZP_05851500.1| glutamate racemase [Granulicatella elegans ATCC 700633] gi|260158378|gb|EEW93446.1| glutamate racemase [Granulicatella elegans ATCC 700633] Length = 215 Score = 68.8 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 12/180 (6%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114 + ++ KY + CN+ +++ D+L + + A Sbjct: 47 SSEYRMAFMREKVEELRAKY--DAIFVYCNSLSSVVDFDQLSQEYEMPMITPMQMYRQLA 104 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 Y Q +++++ + +NL + + ++ + L +E +I Sbjct: 105 MDYQQ---VAVMAANSHGLMGVENNLYKA-NPSLQVIGITLLELVKSIEANLSPKEIA-- 158 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 IK + F G + ++L CTH+P I L+ + +D + + R + L Sbjct: 159 -IKFDFSSLFTFFNGSNVEAVILGCTHFPYIKEELESLT--KLPIIDVGEYMVRTLKEKL 215 >gi|317404913|gb|EFV85281.1| aspartate racemase [Achromobacter xylosoxidans C54] Length = 247 Score = 68.8 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 34/177 (19%) Query: 70 DILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLI 123 L++ L I CNTA + LR L + A+ Q G I Sbjct: 74 RFLERAGAQLIAIPCNTAHLWYDDIAAATLR------PVLHIIQAVIDDLRRLGLQQGRI 127 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKEIE 181 ++ T ATL+ + + +C + VE Y +K ++++ Sbjct: 128 GLMGTAATLKLGLYQRHLEAQGYECIV------PDDDEVERYCMASIRAVKGNQLEAAFA 181 Query: 182 G---CFIEKEGKRTDVIVLACTHYPL-----IVHVFRQLSPWPVDWLDNSDSIARRA 230 C + + D +VL CT PL + + D+ D++AR A Sbjct: 182 PAADCIARLKARGADAVVLGCTELPLAVPHALRPSL------GITLTDSIDALARAA 232 >gi|239932810|ref|ZP_04689763.1| glutamate racemase [Streptomyces ghanaensis ATCC 14672] Length = 98 Score = 68.4 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75 I + DSGIG L ++R L P+ + D G P+G L R + + + Sbjct: 22 IALMDSGIGLLAATAEVRRLRPDADLVLSLDPDGMPWGPRTPEDLTGRALAVAEAA-AAH 80 Query: 76 QPVLSVIACNTAFTLIK 92 +P ++ CNTA Sbjct: 81 RPDALIVGCNTATVHAL 97 >gi|312143810|ref|YP_003995256.1| Asp/Glu/hydantoin racemase [Halanaerobium sp. 'sapolanicus'] gi|311904461|gb|ADQ14902.1| Asp/Glu/hydantoin racemase [Halanaerobium sp. 'sapolanicus'] Length = 220 Score = 68.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 55/155 (35%), Gaps = 8/155 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K + +I CN+ +++ + S + L + A+ + + ++IL+ + Sbjct: 63 LKKAGANIIIIYCNSLSAVLEVDKISALTDIPILTPL-AVYKNLDLSSLDKLAILA-ANS 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 N+I M + + +E +I + ++ + Sbjct: 121 QSAAKIENIIAEKNPHLEFVSAGIMPIINAIEAQKDPTEI---LAEAGLQELLVAFRTMG 177 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 D ++L CTH P + + +D +D I Sbjct: 178 ADTLLLGCTHLPYLKEEIKGFYEN---IIDPADKI 209 >gi|295681452|ref|YP_003610026.1| aspartate racemase [Burkholderia sp. CCGE1002] gi|295441347|gb|ADG20515.1| aspartate racemase [Burkholderia sp. CCGE1002] Length = 488 Score = 68.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 17/186 (9%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+ D + ++ L+ L I CNTA ++ + + + + Sbjct: 301 GDGPDPTI---SLYATCKKLETGGADLIAIPCNTAHAFVERI--QPYLGVPIVNMLTVTV 355 Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI- 169 + + + +L+T TL + S + +V + L +RV + G Sbjct: 356 RYLRESFPALRSVGVLATSGTLASGVYQKALESQGLR---QVVPAPALQARVMDAIYGKA 412 Query: 170 ----KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNS 223 + ++++ + +VIVL CT PL+ + V +D + Sbjct: 413 GVKAGFTAGQCQQDLAAAIDGLIAEGVEVIVLGCTELPLLLREPYVIGANGARVSIVDPT 472 Query: 224 DSIARR 229 D +A++ Sbjct: 473 DVLAKQ 478 >gi|194291994|ref|YP_002007901.1| aspartate/glutamate/hydantoin racemase [Cupriavidus taiwanensis LMG 19424] gi|193225898|emb|CAQ71845.1| putative aspartate/glutamate/hydantoin racemase [Cupriavidus taiwanensis LMG 19424] Length = 3569 Score = 67.7 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 83/266 (31%), Gaps = 31/266 (11%) Query: 19 FDSGIGGLIVLQKMRFLM-----PEYHFIYVADDVGFPYGNWEDHALKKRL-MFLFSDIL 72 FDS GGL+ Q + + D YG E L + + + Sbjct: 1735 FDSSNGGLLAAQNIARHTYAMTGKAVQVVAFTDHAAGTYGGRERGDLVNLVHAGVVAAQK 1794 Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K L ACNTA T + L T + + + + + +++TP T+ Sbjct: 1795 AKGAVDL--FACNTACTAFPEALAGTHQAKVVNLIMQTAPRIVTEGGARPV-VVATPGTV 1851 Query: 133 RRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKE-DEIKKEIEGCF-IEKEG 189 + + + + + A V + +++K + E+ Sbjct: 1852 KLHAYLEAVAEASGGSVTVKEIGATEWADAVNNLMHLADGAKLEQLKGLVAKYINAEQIP 1911 Query: 190 KRTDVIVLACTHYP----LIVHVFRQLSPWPVDWLDNSDSIARRA-----------RCLL 234 + CTHYP L+ + V +D AR+ R L Sbjct: 1912 ADATSLWFCCTHYPALETLVRQQLDAIGRSDVRLIDPMQYQARKGVEMLVDQGLIDRSAL 1971 Query: 235 PRINTHQTRVFDDHAL----FLSGKP 256 + V DD L F +G+P Sbjct: 1972 LEQPLDPSAVPDDKTLPTIVFTTGQP 1997 >gi|319942626|ref|ZP_08016934.1| hypothetical protein HMPREF9464_02153 [Sutterella wadsworthensis 3_1_45B] gi|319803805|gb|EFW00737.1| hypothetical protein HMPREF9464_02153 [Sutterella wadsworthensis 3_1_45B] Length = 479 Score = 66.9 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 19/179 (10%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQSG 121 +F + L+ ++ CNTA L F + F+ A + Sbjct: 294 ALFHCAQRLEADGCSTLIVPCNTAHAF-LPYL-ERFIKIPFINMQQAALDEIQNKLGTRA 351 Query: 122 LISILSTPATLRRTYTSNLIHSYV------SQCHIHLVSSMILASR-VEEYACGIKIKED 174 I +L+T T++ + ++ H V + I + + +ED Sbjct: 352 KIGLLATTGTVQTGIYGDKANAMGLPMFVPDDVHQERVMAAIYGPQGAKAGYTNGICRED 411 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV---FRQLSPWPVDWLDNSDSIARRA 230 I ++ G ++L CT PLI+ F +++ V +D + ++AR+ Sbjct: 412 LISA--AEYLVKTHGCN--CLILGCTELPLILDESDDF-EVAGSRVIVVDPTAALARKV 465 >gi|329767103|ref|ZP_08258631.1| hypothetical protein HMPREF0428_00328 [Gemella haemolysans M341] gi|328837828|gb|EGF87453.1| hypothetical protein HMPREF0428_00328 [Gemella haemolysans M341] Length = 217 Score = 66.9 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 10/166 (6%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAA 115 + ++ ++ D L + + CN+ ++ D L M P Sbjct: 47 EDEERENIIVKIIDELKEKDCGAIFVYCNSLSSVADFDRLAEK---MNISIITPMQMYRN 103 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + +++++ + +NL S + + +S + L +EE +I ED Sbjct: 104 LGLEYKYLAVMAANSHGLTGVENNLYVS-NPRLRVLGLSMLELVKAIEEGNKPEQIVEDF 162 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 K + F E + +VL CTH+P I +++ + +D Sbjct: 163 NFKTLFNYF---ELTNVEAVVLGCTHFPYIKKELEKIT--KLPIID 203 >gi|256545541|ref|ZP_05472901.1| aspartate racemase [Anaerococcus vaginalis ATCC 51170] gi|256398752|gb|EEU12369.1| aspartate racemase [Anaerococcus vaginalis ATCC 51170] Length = 238 Score = 66.5 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 7/131 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPA 130 +DK P VI CNTA D+L+ + + ++ + I I +T Sbjct: 72 VDKLNPDFYVITCNTA-HFFYDDLQ-KLTKKPIINMIELVENKLNKIKKPSTIGIFATEG 129 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEG 189 T++ +N+I + + SS + + E G ++ I + E Sbjct: 130 TIKSKLFNNIIERCSHKAFV---SSRKIQDNINECLYGDVKEKGTINFERYHNTLKEMMD 186 Query: 190 KRTDVIVLACT 200 + D I++ CT Sbjct: 187 QGCDYIIIGCT 197 >gi|241889778|ref|ZP_04777076.1| putative glutamate racemase [Gemella haemolysans ATCC 10379] gi|241863400|gb|EER67784.1| putative glutamate racemase [Gemella haemolysans ATCC 10379] Length = 219 Score = 66.5 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 63/166 (37%), Gaps = 10/166 (6%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAA 115 + ++ ++ D L + + CN+ +++ D L M P Sbjct: 47 EDEERENIIVKIIDELKEKDCYAIFVYCNSLSSVVDFDRLAEK---MNISIITPMQMYRN 103 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + +++++ + +NL S + + +S + L +EE +I ED Sbjct: 104 LGFEYKYLAVMAANSHGLTGVENNLYVS-NPRLRVLGLSMLELVKAIEEGNKPEQILEDF 162 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 K + F E + +VL CTH+P I +++ + +D Sbjct: 163 NFKTLFNYF---ELTNVEAVVLGCTHFPYIKQELEKIT--NLHIID 203 >gi|302390707|ref|YP_003826528.1| Asp/Glu/hydantoin racemase [Thermosediminibacter oceani DSM 16646] gi|302201335|gb|ADL08905.1| Asp/Glu/hydantoin racemase [Thermosediminibacter oceani DSM 16646] Length = 219 Score = 66.1 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 20/177 (11%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAA 116 AL ++++ + D K +I CN+ I + ++ ++ P Sbjct: 53 DALTRKVIAIIGDF-QKLDIKNVMIYCNSLSAAIDLELVKHECSAVNI--VTPLQVYRNL 109 Query: 117 YTQSGLISILSTPA----TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 ++ + + + T+ + N I VS + + +E I Sbjct: 110 ASRYRRLVVWAANGRCLQTIEKILYEN-----NPAIQIIGVSLLPVIVAIENLERPETI- 163 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 +KK + +G + +VL CTH P + ++ PV +D ++ + R Sbjct: 164 ---VKKFDLADLV-FKGFNPEGLVLGCTHLPYLKEKLEEIFSAPV--IDPAEEMLRD 214 >gi|296159354|ref|ZP_06842179.1| aspartate racemase [Burkholderia sp. Ch1-1] gi|295890338|gb|EFG70131.1| aspartate racemase [Burkholderia sp. Ch1-1] Length = 503 Score = 66.1 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 60/176 (34%), Gaps = 8/176 (4%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122 ++ L+ L I CNTA + + ++ + + + + T GL Sbjct: 301 ALYAACRTLEDGGADLIAIPCNTAHAFV-ERIQPSL-GIPIVNMLTCTADYLRETFPGLR 358 Query: 123 -ISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRV-EEYACGIKIKEDEIKKE 179 + +L+T TL + + Q + L V E + Sbjct: 359 EVGVLATTGTLASRVYEQSLEARGFVQIAPGEQAQARLMHAVYGPKGAKAGFTSGECCDD 418 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIV--HVFRQLSPWPVDWLDNSDSIARRARCL 233 + + + VIVL CT PL++ + + V +D ++ +A+R Sbjct: 419 LAAAVDDLIAQGVQVIVLGCTELPLLLRDAMLACAAGRVVRLVDPTEVLAKRCVAY 474 >gi|293605594|ref|ZP_06687974.1| aspartate racemase [Achromobacter piechaudii ATCC 43553] gi|292815974|gb|EFF75075.1| aspartate racemase [Achromobacter piechaudii ATCC 43553] Length = 247 Score = 66.1 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 60/169 (35%), Gaps = 18/169 (10%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILS 127 L++ L I CNTA L ++ + + L + A+ G I ++ Sbjct: 74 RFLEQAGAQLIAIPCNTA-HLWYHDI-AAATGVPVLHIIQAVIDDLRRLGLPKGRIGLMG 131 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-----EDEIKKEIEG 182 T ATL+ + + +C + VE Y G +E Sbjct: 132 TAATLKLGLYQKHLLAQGYECIV------PDDDEVERYCMGSIRAVKGNRLEEAFAPAAE 185 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVH-VFRQLSPWPVDWLDNSDSIARRA 230 C + + D +VL CT PL V R V D+ D++AR A Sbjct: 186 CISRLKARGADAVVLGCTELPLAVPHALRASLG--VTLTDSIDALARAA 232 >gi|91787877|ref|YP_548829.1| aspartate racemase [Polaromonas sp. JS666] gi|91697102|gb|ABE43931.1| Aspartate racemase [Polaromonas sp. JS666] Length = 251 Score = 65.7 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 46/138 (33%), Gaps = 19/138 (13%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +ACNTA EL+ FP + L + QA A + +L+T T Sbjct: 87 LAALGASTVAVACNTAHAW-HAELQERFPQLEVLHVAREVAQALASRGVREVGLLATEGT 145 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-------CGIKIKEDEIKKEIEGCF 184 R + QCHI EE G+K+ + ++ Sbjct: 146 YRAGLYDQALRQAGLQCHI---------PLAEERERLMDGIYHGVKVGNMALARDCFASV 196 Query: 185 IEKEGK--RTDVIVLACT 200 + + +VL CT Sbjct: 197 AQALARRHGLSTLVLGCT 214 >gi|313887691|ref|ZP_07821373.1| XkdX family protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846300|gb|EFR33679.1| XkdX family protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 212 Score = 65.7 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 72/176 (40%), Gaps = 10/176 (5%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114 L + + D K + + CN+ I D+L ++ + + K+ Sbjct: 46 SREDLTRLVEEKIVDAKAKGAEKIFIY-CNSLSASIDIDDLSRR-QAIQIITPLDFYKE- 102 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 ++ + IL+ A + Y + + + + + L +E+ +I + Sbjct: 103 -LDSKYKKLIILA--ANSKSAYGVDALVCEKNFRDTISLGILSLVEEIEKKTQPEEIVKK 159 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 +++ F + E D I+LACTH+P + F++L+ ++ LD ++ + +R Sbjct: 160 LDLRDLFNFFNKMEDV-PDGIILACTHFPYMKEEFKKLT--DIEILDPAEDMIKRL 212 >gi|311106491|ref|YP_003979344.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans A8] gi|310761180|gb|ADP16629.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans A8] Length = 244 Score = 65.3 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 61/179 (34%), Gaps = 26/179 (14%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSG 121 M L L I CNTA L D++ ++ + L + A+ +G Sbjct: 68 YMQEGVRFLQDAGARLIAIPCNTA-HLWYDQIAAS-TGVPVLHIIQAVIDDLRRLGLSAG 125 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-----EDEI 176 I ++ T ATL+ + + QC + VE Y G ++ Sbjct: 126 RIGLMGTAATLKLGLYQQHLEAQGYQCIV------PDDDEVERYCMGSIRAVKANRLEDA 179 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPL-----IVHVFRQLSPWPVDWLDNSDSIARRA 230 C + + D +VL CT PL + V D+ D++AR A Sbjct: 180 YAPAAECIARLKARGADAVVLGCTELPLAVPHALRPSL------GVTLTDSIDALARAA 232 >gi|307299539|ref|ZP_07579338.1| aspartate racemase [Thermotogales bacterium mesG1.Ag.4.2] gi|306914774|gb|EFN45162.1| aspartate racemase [Thermotogales bacterium mesG1.Ag.4.2] Length = 229 Score = 65.3 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 51/148 (34%), Gaps = 2/148 (1%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +R++ + L + +I NT + ++ + + A+ + Sbjct: 60 IERVLSEAAQDLKRAGADFLIICTNTMHLIAREI--EKASGLEVIEIGIAVGEEIERRGL 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L T T+ R Y + + + + + R+ I ++E K Sbjct: 118 KTVGLLGTKFTMERAYYRDTLAGFGISVIVPSEEERAVVDRIIFEELCKGIFKEESKSAY 177 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHV 208 + + + ++L CT PL++ Sbjct: 178 KKIISGLQMNGAEGVILGCTEIPLLIKE 205 >gi|317495332|ref|ZP_07953702.1| hypothetical protein HMPREF0432_00304 [Gemella moribillum M424] gi|316914754|gb|EFV36230.1| hypothetical protein HMPREF0432_00304 [Gemella moribillum M424] Length = 215 Score = 65.0 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 16/169 (9%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 D + ++ ++ + + + Q + CN+ +++ F +A + I Sbjct: 47 DDSEREDIIVEIINKIKEQQCSAIFVYCNSLSSVV------DFDRLAIENEINIITPMQM 100 Query: 117 YTQSGL----ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 Y GL +++++ + +NL S + + +S + L +E+ KI Sbjct: 101 YRNLGLEYKYLAVMAANSHGLTGVENNLYLS-NPELKVFGLSMLELVKAIEDKNSPHKIV 159 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 D K + F E + + +VL CTH+P I +++ + +D Sbjct: 160 ADFDFKNLFNYF---EQTKVEAVVLGCTHFPYIKEELEKIT--KLSIID 203 >gi|330808542|ref|YP_004353004.1| bifunctional protein: aspartate racemase; glutamate racemase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376650|gb|AEA68000.1| Putative bifunctional protein: aspartate racemase; glutamate racemase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 486 Score = 65.0 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 65/187 (34%), Gaps = 8/187 (4%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122 M+ L+ I CNTA + + +++ ++ A SG Sbjct: 299 AMYAACKRLESAGANAIAIPCNTAHAFV-ERIQAHLRVPIVNMLSETVEWIARTYGSGKA 357 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKEI 180 I +L+T T++ Q V + GIK + K+++ Sbjct: 358 IGLLATSGTVQSQVYHQAARQAGLQVLTPGVDYQAMVMDAIYGPRGIKAGFTQGLCKEQL 417 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIV---HVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 V++L CT PL++ F +++ V +D + +A+R L + Sbjct: 418 LLAAEHLCELGAGVLILGCTELPLVLAHCEAF-EINGHRVALVDPTMILAQRCVALAQKA 476 Query: 238 NTHQTRV 244 +++ Sbjct: 477 PLSGSKL 483 >gi|288930673|ref|YP_003434733.1| aspartate racemase [Ferroglobus placidus DSM 10642] gi|288892921|gb|ADC64458.1| aspartate racemase [Ferroglobus placidus DSM 10642] Length = 222 Score = 64.6 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 83/242 (34%), Gaps = 53/242 (21%) Query: 16 ILIFDSGIGGLI------VLQ----KMRFLMPE----YHFIYVADDVGFPYGNWEDHAL- 60 I I +GGL + + R P+ IY + F + Sbjct: 2 IGI----VGGLSPEATAYYYRLFIEESRKRFPKYFYPEILIY---SLNF------KEFVE 48 Query: 61 -----KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115 +KRL+ LD+ + IA NT + DEL+ S + V A+ + A Sbjct: 49 GSSEERKRLLVKALKKLDEAGVKVGGIASNTP-HMFFDELKKAV-SFELVSIVEAVAEKA 106 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKE 173 G +L T T+ + Y + + + RV EE G K ++ Sbjct: 107 G---KGKFLLLGTKKTMESDFYQRAFEKYGGEIIVPEEEDREVVHRVIMEELVLG-KFEK 162 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 D++ + I+ + D +VL CT PL Q V+ D++ + Sbjct: 163 DKLLEVIKKY-----ERFVDGVVLGCTELPL---AISQK-DLNVELFDSAKI---HVEKM 210 Query: 234 LP 235 L Sbjct: 211 LE 212 >gi|317121724|ref|YP_004101727.1| aspartate racemase [Thermaerobacter marianensis DSM 12885] gi|315591704|gb|ADU51000.1| aspartate racemase [Thermaerobacter marianensis DSM 12885] Length = 296 Score = 64.6 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 60/170 (35%), Gaps = 19/170 (11%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV--------PAIKQAAAYTQSGLI 123 L L +I CNTA + D L++ P + L + P AA G + Sbjct: 121 LVSLGATLILIPCNTA-HVYFDRLQAESP-VPILHIMREVARALAPGGDPAAGLAAGGPV 178 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE-DEIKKEIEG 182 +L+T T+ + Q + + +R GIK ++ + Sbjct: 179 GLLATELTVASGLYHRALAEVGLQVLVPEPAYQAQVTRAIFGPDGIKAGVYGPARQRLLE 238 Query: 183 CFIEKEGKRTDVIVLACTHYPL-IVHVFRQLSPW-PVDWLDNSDSIARRA 230 + V++ CT PL + PV W+D ++ +AR A Sbjct: 239 AGAHLVERGARVLIAGCTELPLVLRP------GDFPVPWVDPAEILARAA 282 >gi|116492431|ref|YP_804166.1| aspartate racemase [Pediococcus pentosaceus ATCC 25745] gi|116102581|gb|ABJ67724.1| Aspartate racemase [Pediococcus pentosaceus ATCC 25745] Length = 235 Score = 63.8 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 5/129 (3%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATL 132 K P VIACNTA D+L+ +K + I I+ TP T Sbjct: 74 KLNPAFFVIACNTA-HFFYDDLQKATDVPIVHMPRETVKHIKEQYPNAKKIGIIGTPGTT 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILAS-RVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + L S + + + + E+ I +E++G Sbjct: 133 SDGIYDRELLAEGFEVVKPTKAIQDLTSKLIFDDIKEQNLVDAELFYHILKMMVEEQGA- 191 Query: 192 TDVIVLACT 200 DV++L CT Sbjct: 192 -DVVILGCT 199 >gi|14520631|ref|NP_126106.1| aspartate racemase [Pyrococcus abyssi GE5] gi|5457847|emb|CAB49337.1| racD-2 aspartate racemase [Pyrococcus abyssi GE5] Length = 232 Score = 63.8 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 68/167 (40%), Gaps = 13/167 (7%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +K+++ + L++ L + NT ++ D+++ ++ + + A+ + Sbjct: 58 RKKILINAAKALERAGAELIAFSANTP-HIVFDDVQREV-NVPMVSIIDAVAEEVIRRGV 115 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178 + +L T T+ + + + + +R+ EE A G +D I K Sbjct: 116 KRVLLLGTKTTMSADFYIKALEKKGLEVVVPNDEEKEELNRIIFEELAFGDLKNKDWIVK 175 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSD 224 IE KE + + ++L CT PL +Q V+ D+++ Sbjct: 176 LIERY---KESENIEGVILGCTELPL---AIKQ--GDVSVEVFDSAE 214 >gi|241896564|ref|ZP_04783860.1| aspartate racemase [Weissella paramesenteroides ATCC 33313] gi|241870286|gb|EER74037.1| aspartate racemase [Weissella paramesenteroides ATCC 33313] Length = 241 Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 49/143 (34%), Gaps = 14/143 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPA 130 L+ VI CNTA EL+ F A+K T +S + I++T Sbjct: 79 LNYLGVSFIVITCNTA-HYFLPELQKQSEVPIFSMPELAVKACKKETNKSIRVGIMATNG 137 Query: 131 TLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ LI V+ ++ S + E + E ++ F E Sbjct: 138 TISAGIYQKALIGKNVTPVIPDEYQQNLVMSLIYEDIKNRNFVDQEKYYQLIEYFFE--E 195 Query: 190 KRTDVIVLAC---------THYP 203 D I+L C THYP Sbjct: 196 CECDYIILGCTELSVAQEQTHYP 218 >gi|332157981|ref|YP_004423260.1| aspartate racemase [Pyrococcus sp. NA2] gi|331033444|gb|AEC51256.1| aspartate racemase [Pyrococcus sp. NA2] Length = 226 Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 66/171 (38%), Gaps = 21/171 (12%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +K+++ + L++ + ++ NT ++ D+++ ++ + + A+ + Sbjct: 58 RKKILINAAKALERAGADIIAMSANTP-HMVFDDVQKEV-NVPMVSIIDAVAENVKRRGV 115 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKED 174 + +L T T+ + N + + + ++ +I + Sbjct: 116 KKVLLLGTKTTMSSDFYINALKERGLEVVVPNDEEKEELNRIIFEELAFHNFKNRGWIIE 175 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSD 224 IKK IE ++ + ++L CT PL +Q V+ D+++ Sbjct: 176 LIKKYIEK-------EKIEGVILGCTELPL---AIKQ--GDVEVEVFDSAE 214 >gi|303257154|ref|ZP_07343168.1| putative aspartate racemase [Burkholderiales bacterium 1_1_47] gi|302860645|gb|EFL83722.1| putative aspartate racemase [Burkholderiales bacterium 1_1_47] Length = 484 Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 23/181 (12%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFT---LIKDELRSTFPSMAFLGA--VPAIKQAAAYT 118 ++ L+K VIACNTA I L S+ + V + + Sbjct: 299 SLYAACRKLEKDAVDAIVIACNTAHAYFETIVPHL-----SVPLINMQQVTLEEIRDKFG 353 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKED- 174 +I +++T T+ S + + E+ Sbjct: 354 PDVVIGLMATDGTIETGIYGRKAKSMKLAMVVPDKEHQAMVMEAIYGEKGVKAGFTDGHC 413 Query: 175 -EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV---FRQLSPW-PVDWLDNSDSIARR 229 E+ + + +G + ++L CT PLI+ + +D + S+ARR Sbjct: 414 KEVLLKAAEHLVRDKGAQ--ALILGCTELPLILEETDNIK--LGDGHAAIVDPTASLARR 469 Query: 230 A 230 Sbjct: 470 V 470 >gi|14591491|ref|NP_143571.1| aspartate racemase [Pyrococcus horikoshii OT3] gi|209870333|pdb|2ZSK|A Chain A, Crystal Structure Of Ph1733, An Aspartate Racemase Homologue, From Pyrococcus Horikoshii Ot3 gi|209870334|pdb|2ZSK|B Chain B, Crystal Structure Of Ph1733, An Aspartate Racemase Homologue, From Pyrococcus Horikoshii Ot3 gi|3258164|dbj|BAA30847.1| 226aa long hypothetical aspartate racemase [Pyrococcus horikoshii OT3] Length = 226 Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 68/167 (40%), Gaps = 13/167 (7%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +K+++ + L++ L A NT L+ D+++ ++ + + A+ + Sbjct: 58 RKKILINAAKALERAGAELIAFAANTP-HLVFDDVQREV-NVPMVSIIDAVAEEILKRGV 115 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178 + +L T T+ + + + + +R+ EE A G ++ I + Sbjct: 116 RKVLLLGTKTTMTADFYIKTLEEKGLEVVVPNDEEKEELNRIIFEELAFGNLKNKEWIVR 175 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSD 224 IE +E + + ++L CT PL +Q V+ D+++ Sbjct: 176 LIEKY---RESEGIEGVILGCTELPL---AIKQ--GDVSVEVFDSAE 214 >gi|221633082|ref|YP_002522307.1| aspartate racemase [Thermomicrobium roseum DSM 5159] gi|221156758|gb|ACM05885.1| aspartate racemase [Thermomicrobium roseum DSM 5159] Length = 245 Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 9/141 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTP 129 L++ V+ CNTA +R++ S+ L + A + AA ++ +L+TP Sbjct: 73 LERAGADFIVVPCNTAHAF-LPRVRASI-SIPILSMIAATAERAAAVAPTGSVVGLLATP 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI--KEDEIKKEIEGCFIEK 187 T+ + +C + RV E +K + E+ + + Sbjct: 131 GTIASRLYQQALAERRLRCIV---PDPQWQERVTEAIALVKAGRTDREVAALVLETGRQL 187 Query: 188 EGKRTDVIVLACTHYPLIVHV 208 ++L CT P++ + Sbjct: 188 IAHGAAALILGCTELPIVFPI 208 >gi|329769721|ref|ZP_08261122.1| hypothetical protein HMPREF0433_00886 [Gemella sanguinis M325] gi|328838083|gb|EGF87701.1| hypothetical protein HMPREF0433_00886 [Gemella sanguinis M325] Length = 214 Score = 63.4 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 62/162 (38%), Gaps = 10/162 (6%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 +++++ + L + + + CN+ +++ D L Y Sbjct: 51 REKIIVEIIEQLKEKNCEVIFVYCNSLSSVVDFDRLAIEHNIKIVTPMQMYRNLGLEY-- 108 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 +++++ + +NL S + +S + L +EE +I +D + Sbjct: 109 -KYLAVMAANSHGLTGVENNLYVS-NPSLRVLGLSMLELVKAIEEENSPEEIVKDFNFEV 166 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 + F E + + +VL CTH+P I +++ + +D Sbjct: 167 LFNYF---EQTKVEAVVLGCTHFPYIKKELEKIT--NLPIID 203 >gi|295676130|ref|YP_003604654.1| aspartate racemase [Burkholderia sp. CCGE1002] gi|295435973|gb|ADG15143.1| aspartate racemase [Burkholderia sp. CCGE1002] Length = 519 Score = 63.0 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 10/177 (5%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122 ++ L++ L I CNTA + + L+ + + + T GL Sbjct: 316 ALYAACKTLEEGGADLIAIPCNTAHAFV-ERLQPALR-VPIVNMLTCTADYLRETFPGLR 373 Query: 123 -ISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKI--KEDEIKK 178 + +L+T TL ++ + +Q + L + + G K E Sbjct: 374 EVGVLATSGTLASRVYEQVLDARGLAQIAPSAAAQARLMNAI-YGPRGAKAGHTSGECCD 432 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNSDSIARRARCL 233 ++ + + VIVLACT PL+ V V +D +D +ARR Sbjct: 433 DLAAAVDDLVAQGVQVIVLACTELPLLLREPVLASPGGRVVRLVDPTDVLARRCVAY 489 >gi|331000797|ref|ZP_08324443.1| aspartate racemase [Parasutterella excrementihominis YIT 11859] gi|329570325|gb|EGG52058.1| aspartate racemase [Parasutterella excrementihominis YIT 11859] Length = 484 Score = 63.0 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 23/181 (12%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFT---LIKDELRSTFPSMAFLGA--VPAIKQAAAYT 118 ++ L+K VIACNTA I L S+ + V + + Sbjct: 299 SLYAACRKLEKDAVDAIVIACNTAHAYFETIVPHL-----SVPLINMQQVTLEEIRDRFG 353 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKED- 174 +I +++T T+ S + + E+ Sbjct: 354 PDVVIGLMATDGTIETGIYGRKAKSMKLAMVVPDKEHQAMVMEAIYGEKGVKAGFTDGHC 413 Query: 175 -EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV---FRQLSPW-PVDWLDNSDSIARR 229 E+ + + +G + ++L CT PLI+ + +D + S+ARR Sbjct: 414 KEVLLKAAEHLVRDKGAQ--ALILGCTELPLILEETDNIK--LGDGHAAIVDPTASLARR 469 Query: 230 A 230 Sbjct: 470 V 470 >gi|56697504|ref|YP_167872.1| aspartate racemase, putative [Ruegeria pomeroyi DSS-3] gi|56679241|gb|AAV95907.1| aspartate racemase, putative [Ruegeria pomeroyi DSS-3] Length = 485 Score = 63.0 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 59/174 (33%), Gaps = 20/174 (11%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ--AAAYTQSG 121 ++ L++ I CNTA + D ++ + + + + A + + G Sbjct: 304 ALYATCKKLERAGAQAIAIPCNTAHAFV-DRIQKNL-DIPIISILTETARFIGALHPEIG 361 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKE 179 +++L+T T++ + + + + V G+K + Sbjct: 362 KVAVLATSGTIQSGLYQSALRDQGLDPVLPDAGMQEMVMEVIYGPSGVKAGFTTGRCAAQ 421 Query: 180 IEGCFIEKEGKRTDVIVLACT-----HYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + G+ +L CT H P +P + +D ++ +AR Sbjct: 422 LAQVIAAMTGQGAQAAILGCTELPLVHLP---------APAAIRLIDPTEVLAR 466 >gi|251790314|ref|YP_003005035.1| aspartate racemase [Dickeya zeae Ech1591] gi|247538935|gb|ACT07556.1| aspartate racemase [Dickeya zeae Ech1591] Length = 252 Score = 63.0 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 73/223 (32%), Gaps = 34/223 (15%) Query: 6 YPCEKKLQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59 + + I I +GG+ V +QK+ P D P Sbjct: 9 RSEAENVNPVIGI----LGGMGPGATVDAMQKLIRQTPARK-----DQEHIPVIAVSIPD 59 Query: 60 LKKRLMFLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG 106 + R + + IL+ +I CNTA ++L+ + + Sbjct: 60 IPDRTQCILNHSPSPLKKMIEYMRILENAGATCIIIPCNTA-HYWFEDLKQH-TQVDMIS 117 Query: 107 AVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166 + A Q A + ++IL+T AT+R + + +C + + V Sbjct: 118 IIEAACQQVAEQRVRHVAILATTATVRSDIYQHALADQQVRC---TLPTNEQQDAVMNSI 174 Query: 167 CGIKIKE-DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208 K + + + + + + ++L CT PLI+ Sbjct: 175 YAYKAGDVAQSRALLLPVVASLRQQGVEKMILGCTELPLILET 217 >gi|212697323|ref|ZP_03305451.1| hypothetical protein ANHYDRO_01892 [Anaerococcus hydrogenalis DSM 7454] gi|212675772|gb|EEB35379.1| hypothetical protein ANHYDRO_01892 [Anaerococcus hydrogenalis DSM 7454] Length = 238 Score = 63.0 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 51/148 (34%), Gaps = 8/148 (5%) Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114 + L +DK P VI CNTA D+L+ + + ++ Sbjct: 56 KSEENPYDFLKEDVES-VDKLNPDFYVITCNTA-HFFYDDLQ-KLTKKPIINMIELVENK 112 Query: 115 A-AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 + I + +T T++ +++I + LVSS L + + Sbjct: 113 LNELKKPSTIGLFATEGTIKSRLFTDIIERCGHKA---LVSSKELQENINACLYKDVKES 169 Query: 174 DEIK-KEIEGCFIEKEGKRTDVIVLACT 200 +I K + + D I++ CT Sbjct: 170 GQINFKRYHKILDKMLEEGADYIIIGCT 197 >gi|306479758|emb|CBV36003.1| glutamate racemase [Helicobacter pylori] Length = 109 Score = 63.0 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 13/114 (11%) Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL------S 213 +EE I E E+ + + +VI+L CTH+PLI Sbjct: 1 PLIEE-----SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFAL 55 Query: 214 PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 P P + + D+I + + F SG ++ + Sbjct: 56 PTPPLLIHSGDAIVEYLQQ--KYALKNNAHAFPKVEFHASGDVIWLEKQAKEWL 107 >gi|332158923|ref|YP_004424202.1| aspartate racemase [Pyrococcus sp. NA2] gi|331034386|gb|AEC52198.1| aspartate racemase [Pyrococcus sp. NA2] Length = 228 Score = 62.7 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 5/130 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ V+ CNTA +++R + + + + + + +++T T Sbjct: 70 LEECGADFIVMPCNTAHAF-IEDIRKSVK-IPVISMIEETAKRVKDEGCKKVGLIATTGT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI-KKEIEGCFIEKEGK 190 + N ++ + S ++ G+K E+ +K + G + E + Sbjct: 128 IVSKVYHNELNKL--GIEVLTPSEHEQDEVMKGIYQGVKAGNLELGRKILLGIAKKLEER 185 Query: 191 RTDVIVLACT 200 D I+ CT Sbjct: 186 GADCIIAGCT 195 >gi|115360958|ref|YP_778095.1| aspartate racemase [Burkholderia ambifaria AMMD] gi|115286286|gb|ABI91761.1| aspartate racemase [Burkholderia ambifaria AMMD] Length = 484 Score = 62.7 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 14/175 (8%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120 ++ L+ + I CNTA ++ + + + + T Sbjct: 305 ISLYATCKKLEDGDADIIAIPCNTAHAFVERI--QPWLRIPIVNMLSVTVAHLRDTYPAL 362 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-----IKEDE 175 + +L+T T+ + S + + + L +RV E G + + Sbjct: 363 QEVGVLATSGTIESGVYRKALESQGLR---QVAPAPALQARVMEAIYGAQGVKAGFTTGQ 419 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIAR 228 +++I + VIVL CT P+++ + +D +D +AR Sbjct: 420 CEEDIGAAIDALMDEGVSVIVLGCTELPILLPGDEYVGRNGRRATLVDPTDVLAR 474 >gi|296129577|ref|YP_003636827.1| aspartate racemase [Cellulomonas flavigena DSM 20109] gi|296021392|gb|ADG74628.1| aspartate racemase [Cellulomonas flavigena DSM 20109] Length = 244 Score = 62.7 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 7/168 (4%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 +M + L++ V+ CNTA DE+ + + + AA + Sbjct: 74 VMAADARRLERLGVGFVVVPCNTA-HHFTDEVAAAVDVPVLSIVDETVDEVAARPGVARV 132 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEG 182 +L+T TL I + + + + + + + + + + Sbjct: 133 GVLATSGTLAARVYQRAIEARGLEAVVPDDADQDVVMGIIYDQVKAGRPADVAALHAVAD 192 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 E+ DV+VL CT ++ +L ++D+ D +ARR Sbjct: 193 RLRER---GADVVVLGCTELSVVAAE-HRLL-DDARYVDSLDVLARRT 235 >gi|164686387|ref|ZP_02210417.1| hypothetical protein CLOBAR_02825 [Clostridium bartlettii DSM 16795] gi|164601989|gb|EDQ95454.1| hypothetical protein CLOBAR_02825 [Clostridium bartlettii DSM 16795] Length = 233 Score = 62.7 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 60/161 (37%), Gaps = 11/161 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+++ VI CNTA D++ + ++ L V + A + + I++T Sbjct: 73 LEQFGVDFIVITCNTA-HYFYDKINESV-NIPVLSIVEETVKYAKESGHKKLGIMATTGN 130 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ + + + + + ++ G ++ K + + Sbjct: 131 IKTELYQTMCKKFDMEYFVLDDERQQQVMEIIYDDIKSGKPADMNKFNKLVN----HLKE 186 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 D IVL CT ++ + + ++D+ + +AR+ Sbjct: 187 NECDGIVLGCTELSILKND--NNLGNDL-YIDSLEVLARQT 224 >gi|172065222|ref|YP_001815934.1| aspartate racemase [Burkholderia ambifaria MC40-6] gi|171997464|gb|ACB68381.1| aspartate racemase [Burkholderia ambifaria MC40-6] Length = 489 Score = 62.7 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 14/175 (8%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120 ++ L+ + I CNTA ++ + + + + T Sbjct: 305 ISLYATCKKLEDGDADVIAIPCNTAHAFVERI--QPWLGIPIVNMLSVTVAHLRDTYPAL 362 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-----IKEDE 175 + +L+T T+ + S + + + L +RV E G + Sbjct: 363 REVGVLATSGTVESGVYRKALESQGLR---QVAPAPALQARVMEAIYGPQGVKAGFTTGR 419 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIAR 228 +++I + VIVL CT P+++ ++ +D +D +AR Sbjct: 420 CEEDIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVARNGRRATLVDPTDVLAR 474 >gi|210621999|ref|ZP_03292942.1| hypothetical protein CLOHIR_00888 [Clostridium hiranonis DSM 13275] gi|210154444|gb|EEA85450.1| hypothetical protein CLOHIR_00888 [Clostridium hiranonis DSM 13275] Length = 215 Score = 62.3 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 59/168 (35%), Gaps = 8/168 (4%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 K+ M + + + + CN+ + + E S ++ + + A K+ A Sbjct: 47 PQETKELEMKKIINKIKECGIKKIFVYCNSLSSAVDMEKLSKEENIVIVTPMDAYKKIAV 106 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 S + + + I C++ + + + VE I D Sbjct: 107 DYNS--VGVFA-ANNQGLAGIERTIVEKNKNCNVIGIGILPVVLDVEAKKQAQDIIAD-- 161 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224 ++ E + + I+L CTH+P ++ + ++ ++ S+ Sbjct: 162 -NHLDLAVEFFEKNKVEAIILGCTHFPYFEKELKKCT--ELEIINPSE 206 >gi|71083965|ref|YP_266685.1| aspartate racemase [Candidatus Pelagibacter ubique HTCC1062] gi|71063078|gb|AAZ22081.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1062] Length = 248 Score = 62.3 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 10/133 (7%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTP 129 L+K VI CNTA ++LR + + I+ + ++ I +L+T Sbjct: 84 LEKSGCKFIVIPCNTA-HYWYEDLRKKIK-IPIINMPKEVFIQTKKSCKKNSKIGLLATE 141 Query: 130 ATLRRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACG-IKIKEDEIKKEIEGCFIEK 187 TL+ + YV + + + + ++ G IK+ E IK I+ I++ Sbjct: 142 GTLKTEIYDKIFKKDYVLIKPLSNLQTSSVNKTIKHVKMGNIKLAEKTIKPAIK-YLIKQ 200 Query: 188 EGKRTDVIVLACT 200 + K+ +L CT Sbjct: 201 KCKKI---ILGCT 210 >gi|228919689|ref|ZP_04083051.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840043|gb|EEM85322.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 80 Score = 62.3 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 18/63 (28%) Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + V + +++ A +L + H F +G Q Sbjct: 1 MIKSELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVLSFEHIAEQWL 60 Query: 268 GLK 270 G + Sbjct: 61 GYQ 63 >gi|171315873|ref|ZP_02905103.1| aspartate racemase [Burkholderia ambifaria MEX-5] gi|171098969|gb|EDT43757.1| aspartate racemase [Burkholderia ambifaria MEX-5] Length = 500 Score = 61.9 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 14/175 (8%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120 ++ L+ + I CNTA ++ + + + + T Sbjct: 306 ISLYATCKKLEDGDADVIAIPCNTAHAFVEWI--QPWLGIPIINMLTVTVAHLRDTYPAL 363 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI-----KIKEDE 175 + +L+T T++ + S + + + L +RV E G Sbjct: 364 RQVGVLATSGTIQSGVYQKALESQGLR---QVAPAPALQARVMEAIYGTHGVKAGFTTGR 420 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIAR 228 +++I + VIVL CT P+++ ++ +D +D +AR Sbjct: 421 CEEDIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVARNGRRATLVDPTDVLAR 475 >gi|118476501|ref|YP_893652.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam] gi|196046990|ref|ZP_03114210.1| glutamate racemase [Bacillus cereus 03BB108] gi|225862818|ref|YP_002748196.1| glutamate racemase [Bacillus cereus 03BB102] gi|229183175|ref|ZP_04310405.1| Glutamate racemase [Bacillus cereus BGSC 6E1] gi|118415726|gb|ABK84145.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam] gi|196022219|gb|EDX60906.1| glutamate racemase [Bacillus cereus 03BB108] gi|225789735|gb|ACO29952.1| glutamate racemase [Bacillus cereus 03BB102] gi|228600314|gb|EEK57904.1| Glutamate racemase [Bacillus cereus BGSC 6E1] Length = 80 Score = 61.9 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 7/63 (11%), Positives = 19/63 (30%) Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + ++ V + +++ A +L + H F +G + Sbjct: 1 MIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSALSFEHIAERWL 60 Query: 268 GLK 270 G + Sbjct: 61 GYQ 63 >gi|309807430|ref|ZP_07701393.1| glutamate racemase family protein [Lactobacillus iners LactinV 01V1-a] gi|308169352|gb|EFO71407.1| glutamate racemase family protein [Lactobacillus iners LactinV 01V1-a] Length = 78 Score = 61.5 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 104 FLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV 162 +G + A+ TQ+ +++++T AT+ I +Q + + LA V Sbjct: 3 IIGVIQSGALAASKITQTNQVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLV 62 Query: 163 EEYACG 168 E Sbjct: 63 EANPSD 68 >gi|170699320|ref|ZP_02890368.1| aspartate racemase [Burkholderia ambifaria IOP40-10] gi|170135750|gb|EDT04030.1| aspartate racemase [Burkholderia ambifaria IOP40-10] Length = 490 Score = 61.1 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 58/175 (33%), Gaps = 14/175 (8%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120 ++ L+ + I CNTA ++ + + + + T Sbjct: 306 ISLYATCKKLEDGDADVIAIPCNTAHAFVERI--QPWLGIPIVNMLTVTVAHLRDTYPAL 363 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI-----KIKEDE 175 + +L+T T+ + S + + + L +RV E G Sbjct: 364 REVGVLATSGTIESGVYRKALESQGLR---QVAPAPALQARVMEAIYGSHGVKAGFTTGR 420 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIAR 228 +++I + VIVL CT P+++ + +D +D +AR Sbjct: 421 CEEDIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVGRNGRRATLVDPTDVLAR 475 >gi|301052505|ref|YP_003790716.1| glutamate racemase [Bacillus anthracis CI] gi|300374674|gb|ADK03578.1| glutamate racemase [Bacillus cereus biovar anthracis str. CI] Length = 80 Score = 61.1 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 7/62 (11%), Positives = 18/62 (29%) Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + ++ V + +++ A +L + H F +G + Sbjct: 1 MIKRELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSALSFEHIAERWL 60 Query: 268 GL 269 G Sbjct: 61 GY 62 >gi|240103413|ref|YP_002959722.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3] gi|239910967|gb|ACS33858.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3] Length = 226 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 66/168 (39%), Gaps = 15/168 (8%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +K+++ + L++ + + NT ++ +++ S+ + + A+ + Sbjct: 58 RKKILINAAKALERAGAEIIALTANTP-HIVFPDVQKAV-SVPMVSIIDALIEEMKRRGV 115 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178 + +L T T+ + + ++ + + + +R+ EE A + + Sbjct: 116 RKVLLLGTKTTMTAGFYKDALNRAGFEAVVPGREEIEEVNRIIFEELAFENFKNKPYLLS 175 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSD 224 +E ++ + + ++L CT PL R P V+ D ++ Sbjct: 176 LVEKY---RKERGIEGVILGCTELPL---AIR---PDDVSVEVFDTAE 214 >gi|33597484|ref|NP_885127.1| putative aspartate racemase [Bordetella parapertussis 12822] gi|33601880|ref|NP_889440.1| putative aspartate racemase [Bordetella bronchiseptica RB50] gi|33573912|emb|CAE38228.1| putative aspartate racemase [Bordetella parapertussis] gi|33576317|emb|CAE33396.1| putative aspartate racemase [Bordetella bronchiseptica RB50] Length = 247 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 53/176 (30%), Gaps = 26/176 (14%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSG 121 M L + L I CNTA + E + L + A+ Q G Sbjct: 68 AMIAGMRFLREAGARLIAIPCNTA--HLWYEPLAAVAGCTVLHIIEAVAQDLRRQGLHGG 125 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-----EDEI 176 I ++ T ATL + C I VE Y G D Sbjct: 126 RIGLMGTSATLALGLYQQTLQRQGYSCIIPE------PDEVERYCMGSIRAVKANRLDLA 179 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPL-----IVHVFRQLSPWPVDWLDNSDSIA 227 + C + + D +VL CT PL + + D+ D++A Sbjct: 180 YEPAAECIARLKARGADAVVLGCTELPLAVPHALRP------GLGIRLTDSIDALA 229 >gi|300813990|ref|ZP_07094283.1| Asp/Glu/Hydantoin racemase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511884|gb|EFK39091.1| Asp/Glu/Hydantoin racemase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 217 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 56/151 (37%), Gaps = 8/151 (5%) Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS 143 CN+ + +++ + P + I IL+ A Y + I S Sbjct: 73 CNSLSAAL--DVKRLSKELDIQIICPFDVYENLDEKYKNIFILAANALA--AYKEDEILS 128 Query: 144 YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF--IEKEGKRTDVIVLACTH 201 +I + ++ + +E +I E K + I+ E + I+L CTH Sbjct: 129 KTFHRNIISMGNLSIVENIEVDTPAEEIIEKLNLKGLMNYINNIKDEKYKIQAIILGCTH 188 Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 +P + ++ + +D +D + + + + Sbjct: 189 FPYLKDELKKYT--SIDIIDPATEMIKLLKN 217 >gi|317484334|ref|ZP_07943255.1| aspartate racemase [Bilophila wadsworthia 3_1_6] gi|316924412|gb|EFV45577.1| aspartate racemase [Bilophila wadsworthia 3_1_6] Length = 250 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 13/159 (8%) Query: 84 CNTAFT-----LIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLRRTY 136 CNTA + ++L +T + F+ + A+ + + + ILST ATL Sbjct: 87 CNTAHSPRILDAALEKLNATGRPVRFVHMIDAVVRHVRQRCGEGARVGILSTLATLETRL 146 Query: 137 TSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEGKRTD 193 + + + H + + GIK + ++ E + D Sbjct: 147 YQDSLERAGLEALHPAPDGCARVQEAISNREYGIKARNPVTERARADLLDEARRLAGNAD 206 Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 I+L CT PL + + V +D +D +AR Sbjct: 207 AIILGCTEIPLALPE--KELG-GVPLIDATDVLARELVR 242 >gi|325848987|ref|ZP_08170497.1| aspartate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480631|gb|EGC83693.1| aspartate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 238 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 8/148 (5%) Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114 L +DK P VI CNTA ++L+ + + ++ Sbjct: 56 KSKENPYDFLKEDVES-VDKLDPDFYVITCNTA-HFFYEDLK-KLTKKPIINMIELVENK 112 Query: 115 A-AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 + I + +T T++ +++I + LVSS L + + + Sbjct: 113 LNELKKPSTIGLFATEGTIKSRLFTDIIERCGHKA---LVSSKELQENINDCLYKDVKES 169 Query: 174 DEIK-KEIEGCFIEKEGKRTDVIVLACT 200 +I + + + D I++ CT Sbjct: 170 GQINFERYHKTLDKMLEEGADYIIIGCT 197 >gi|307130300|ref|YP_003882316.1| putative aspartate racemase [Dickeya dadantii 3937] gi|306527829|gb|ADM97759.1| Probable aspartate racemase [Dickeya dadantii 3937] Length = 238 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 53/139 (38%), Gaps = 6/139 (4%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 IL+ +I CNTA ++L+ + + + A Q A + ++IL+T Sbjct: 69 KILENAGASCIIIPCNTA-HYWFEDLK-RHTQLEMISIIDATCQQVAEQRVRHVAILATT 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE-DEIKKEIEGCFIEKE 188 AT+R + + +C + + V K + + + + Sbjct: 127 ATVRGEIYQHALAGQQVRC---TLPTDEQQDAVMNSIYAYKAGDVAQARALLLPVVASLR 183 Query: 189 GKRTDVIVLACTHYPLIVH 207 + + I+L CT PLI+ Sbjct: 184 QRGVEKIILGCTELPLILE 202 >gi|282883367|ref|ZP_06291960.1| racemase [Peptoniphilus lacrimalis 315-B] gi|281296778|gb|EFA89281.1| racemase [Peptoniphilus lacrimalis 315-B] Length = 217 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 63/179 (35%), Gaps = 9/179 (5%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115 L+K+ L L + CN+ + +++ + P Sbjct: 46 SKEILEKKFKNLSRQALSWGAEKFFIY-CNSLSAAL--DVKRLSKELDIQIICPFDVYEN 102 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + I IL+ A Y + I S +I + ++ + +E +I E Sbjct: 103 LDEKYKNIFILAANALA--AYKEDEILSKTFHRNIISMGNLSIVENIEVDRPAEEIIEKL 160 Query: 176 IKKEIEGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 K + I+ E + I+L CTH+P + ++ + +D +D + + + + Sbjct: 161 NLKGLMNYINNIKDEKYKIQAIILGCTHFPYLKDELKKYT--SIDIIDPATEMIKLLKN 217 >gi|188586853|ref|YP_001918398.1| Asp/Glu/hydantoin racemase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351540|gb|ACB85810.1| Asp/Glu/hydantoin racemase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 228 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 62/150 (41%), Gaps = 13/150 (8%) Query: 80 SVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT- 137 +I CN+ + D+L+ P + + + K+ A Q+ I+++S AT T Sbjct: 75 VIIYCNSLSASLDLDKLKKLSP-LPIVTPLDIYKEIANDFQT--IALMS--ATNSSNITI 129 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 ++ S + S + + ++E+ KI + I+ + + ++L Sbjct: 130 EKVMRQNNSYITVLGFSLLPVVLQIEKGVAPEKIVHEV---GIKDLLAAISKLKVESLIL 186 Query: 198 ACTHYPLIVHVFRQLS---PWPVDWLDNSD 224 ACTH+P +L + + +D ++ Sbjct: 187 ACTHFPYFKDEVDELISEQGYTFELIDPAE 216 >gi|163856639|ref|YP_001630937.1| putative aspartate racemase [Bordetella petrii DSM 12804] gi|163260367|emb|CAP42669.1| putative aspartate racemase [Bordetella petrii] Length = 245 Score = 60.3 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 16/179 (8%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILS 127 L + I CNTA L D+L + P + L + A+ Q G I ++ Sbjct: 73 RFLHAAGARVIAIPCNTA-HLWYDQLCAATP-LPILHIIDAVAQDLRRLGLAHGRIGLMG 130 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY--ACGIKIKEDEIKKEIEGCFI 185 TPATL + + QC + A +E Y A +K ++ +E Sbjct: 131 TPATLALGLYQTRLERHGYQCIV------PDADEIERYCVAPIRAVKAGDLPAAVEPAMQ 184 Query: 186 ---EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + D +VL CT PL + ++ + V D+ D++AR A + H+ Sbjct: 185 GVRLLRARGADAVVLGCTELPLAIPHAQRAA-LGVLLTDSIDALARAAIDYWRQTPEHR 242 >gi|271501156|ref|YP_003334181.1| aspartate racemase [Dickeya dadantii Ech586] gi|270344711|gb|ACZ77476.1| aspartate racemase [Dickeya dadantii Ech586] Length = 238 Score = 60.3 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 44/222 (19%) Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 + I I +GG+ V +QK+ P D P + R Sbjct: 1 MNPVIGI----LGGMGPGATVDAMQKLIRQTPARK-----DQEHIPMIAVSIPDIPDRTQ 51 Query: 66 FLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 + + IL+ +I CNTA ++L+ + + + A Sbjct: 52 CILNHSPSPLKKMIEYMRILENAGATCIIIPCNTA-HYWFEDLK-RHTQVDMISIIDAAC 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 Q A + + IL+T AT+R + + S + L ++ A I Sbjct: 110 QQVAEQRVHHVGILATTATVRGNIYQHAL----SGQQVRS----TLPDDAQQQAVMNSIY 161 Query: 173 EDEI------KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208 + + + + + I+L CT PLI+ Sbjct: 162 AYKAGDFSQSRALLLPVVDSLRQQGVEKIILGCTELPLILEA 203 >gi|28210540|ref|NP_781484.1| aspartate racemase [Clostridium tetani E88] gi|28202977|gb|AAO35421.1| aspartate racemase [Clostridium tetani E88] Length = 231 Score = 60.3 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 49/165 (29%), Gaps = 10/165 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-KQAAAYTQSGLISILSTPA 130 L ++ CNTA DEL +M F+ + + K + +L+T Sbjct: 71 LKNAGADFLIMPCNTA-HYFYDELYEKL-NMPFINMIEEVGKYIVTKHGKIKVGLLATLG 128 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T + I S + + K+ E K Sbjct: 129 TYQGKIYERYCKELGLDIIIPSKEVRQKVSDAVYIVKSGQ--RNFTKEFAMDMLKEFNEK 186 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARRAR 231 + ++L CT PLI +++ + + +R + Sbjct: 187 DVNAVILGCTELPLIFQPLENDL-KDFEFISSTDILAKETIKRVK 230 >gi|209518824|ref|ZP_03267637.1| aspartate racemase [Burkholderia sp. H160] gi|209500709|gb|EEA00752.1| aspartate racemase [Burkholderia sp. H160] Length = 486 Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 64/177 (36%), Gaps = 18/177 (10%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122 ++ L+ + I CNTA + + + + + + + GL Sbjct: 306 SLYATCKKLEDGGADIIAIPCNTAHAFVDRI--QPYLGIPIVNMLTVTVRYLRDSFPGLR 363 Query: 123 -ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS-MILASRVEEYACGIK-----IKEDE 175 +L+T T+ + S +H ++ L +RV + G + Sbjct: 364 DFGVLATSGTIGSGVYQKALESQG----LHQIAPGAALQARVMDAIYGNNGVKAGFTTGQ 419 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARR 229 +++I + +V++L CT P+++ + V +D ++ +AR+ Sbjct: 420 CQEDIIAAVEGLIAEGVEVVLLGCTELPILLPA-GEFVGRNGGRVQLVDPTEVLARQ 475 >gi|229089909|ref|ZP_04221164.1| Glutamate racemase [Bacillus cereus Rock3-42] gi|228693534|gb|EEL47240.1| Glutamate racemase [Bacillus cereus Rock3-42] Length = 80 Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 7/62 (11%), Positives = 19/62 (30%) Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + ++ V + +++ A +L + +H F +G + Sbjct: 1 MIKKELGEDVTIISSAEETAIELNTMLQHKGILSDNLNPEHRFFTTGSALSFEHIAERWL 60 Query: 268 GL 269 G Sbjct: 61 GY 62 >gi|218232186|ref|YP_002365636.1| glutamate racemase [Bacillus cereus B4264] gi|229068519|ref|ZP_04201820.1| Glutamate racemase [Bacillus cereus F65185] gi|229078168|ref|ZP_04210744.1| Glutamate racemase [Bacillus cereus Rock4-2] gi|218160143|gb|ACK60135.1| glutamate racemase [Bacillus cereus B4264] gi|228705138|gb|EEL57548.1| Glutamate racemase [Bacillus cereus Rock4-2] gi|228714661|gb|EEL66535.1| Glutamate racemase [Bacillus cereus F65185] Length = 80 Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 7/63 (11%), Positives = 18/63 (28%) Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + V + +++ A +L + H F +G + Sbjct: 1 MIKSELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVLSFEHIAERWL 60 Query: 268 GLK 270 G + Sbjct: 61 GYQ 63 >gi|326318025|ref|YP_004235697.1| aspartate racemase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374861|gb|ADX47130.1| aspartate racemase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 263 Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 54/169 (31%), Gaps = 21/169 (12%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L IACNTA L+ FP ++ L + + +L+T T Sbjct: 93 LAALGARAVAIACNTAHAW-HRLLQERFPQLSVLHMPREVAALLHAQGRRRVGLLATQGT 151 Query: 132 LRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKED-----EIKKEIEGCFI 185 R + C L + E + E+ + + Sbjct: 152 YRSGLYRRALEQAGIDCLEPDEAGRERLMQGIYEGVKAGDMALARQCFSEVAQAL----- 206 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARRA 230 ++ +VIV+ CT PL + + LD +D++AR A Sbjct: 207 -RDAGGAEVIVMGCTEIPLALDE----AGAGAALLDPARVLADALAREA 250 >gi|157146318|ref|YP_001453637.1| hypothetical protein CKO_02076 [Citrobacter koseri ATCC BAA-895] gi|157083523|gb|ABV13201.1| hypothetical protein CKO_02076 [Citrobacter koseri ATCC BAA-895] Length = 239 Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 24/179 (13%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLI 123 + L + L++ VIACNTA E + L V A + + Sbjct: 66 LLLGVEQLNRAGASHIVIACNTA--HHWYEALAQHSDAPLLHIVDATLAVFEGKEKPRRV 123 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI-----LASRVEEYACGIKIKEDEIKK 178 +++T TL + H + S + + G E+ Sbjct: 124 GLIATQGTLDAGWFQ---HGFASMGIESVQPTPEELRQWFVPGCYAVKRGELRTGGELLS 180 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHV---FRQLSPWPVDW-LDNSDSIARRARCL 233 ++ +R +VLACT V +++ + +D ++++A++ L Sbjct: 181 LQAQALRDRGAER---LVLACT------EVPVALAEVTSPHLAVSIDPAEALAQQCARL 230 >gi|34762320|ref|ZP_00143324.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27888042|gb|EAA25105.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 143 Score = 60.0 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 7/100 (7%) Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEKEGKR 191 + Y + Q H+ SS L +E A I+ E IK I+ C E + + Sbjct: 8 QNYIKREVGDSYKQFHVENASS--LIQLIESGAFINNIEETEKTIKNFIDNC--ENKFGK 63 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 D I L+ TH P + F ++ P D +DS+ + + Sbjct: 64 LDSITLSSTHLPWLSSYFEKIIP-QTKLYDPADSLVKAIK 102 >gi|20808149|ref|NP_623320.1| aspartate racemase [Thermoanaerobacter tengcongensis MB4] gi|254479423|ref|ZP_05092754.1| aspartate racemase subfamily protein [Carboxydibrachium pacificum DSM 12653] gi|20516738|gb|AAM24924.1| Aspartate racemase [Thermoanaerobacter tengcongensis MB4] gi|214034647|gb|EEB75390.1| aspartate racemase subfamily protein [Carboxydibrachium pacificum DSM 12653] Length = 234 Score = 60.0 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 58/189 (30%), Gaps = 26/189 (13%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G L + L K VI CNTA D L+ + + + + Sbjct: 60 GPDPTPELIA-----TAKNLVKAGADFIVIPCNTA-HYFLDYLKREV-DIPIINMI---E 109 Query: 113 QAAAYTQSG-----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167 + A Y ++ + +L+T T++ + + A EE Sbjct: 110 ETARYVRNNYPYAECVGLLATSGTIKSNLYHKAFKKFGISVLAGDEKKTMEAIYGEEGIK 169 Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSD 224 + E ++ ++ E + VI+ CT + + +D Sbjct: 170 AGNLGEKP-RRLLKEAAQELIRRGAQVIIAGCT-------EISLVLGEEDVSLPLVDPLT 221 Query: 225 SIARRARCL 233 +A+ A L Sbjct: 222 ILAKVAVEL 230 >gi|81427712|ref|YP_394710.1| aspartate racemase [Lactobacillus sakei subsp. sakei 23K] gi|78609352|emb|CAI54398.1| Aspartate racemase [Lactobacillus sakei subsp. sakei 23K] Length = 238 Score = 60.0 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 5/125 (4%) Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA-AAYTQSGLISILSTPATLRRT 135 P VIACNTA D+L++ + +K Y + I IL T T+ Sbjct: 81 PAFFVIACNTA-HYFYDDLQAAASAPIVHMPRETVKSIQTTYPDAKRIGILGTKGTVTDG 139 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + + + S+ L R + + ++K E + + + D I Sbjct: 140 IYDEALLAEGYEV---VKPSLDLQERTMDLIFNDIKGQSQMKPEKYHAILAEMQTQCDAI 196 Query: 196 VLACT 200 +L CT Sbjct: 197 ILGCT 201 >gi|332286031|ref|YP_004417942.1| putative aspartate/glutamate racemase [Pusillimonas sp. T7-7] gi|330429984|gb|AEC21318.1| putative aspartate/glutamate racemase [Pusillimonas sp. T7-7] Length = 240 Score = 59.6 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 51/166 (30%), Gaps = 38/166 (22%) Query: 81 VIA--CNTA-----------FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 VIA CNTA + +RS + G + G I +L Sbjct: 84 VIAIPCNTAHLWYDKLAASTSLTVLHIVRSVVVDLQRNGI-----------KRGRIGLLG 132 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T TL + + +C + L + +L E + D + C Sbjct: 133 TATTLSSGLYQRELEAQGYEC-VLLEHNDLLRYCAEAIRLVKVNQADAALEPAVQCVQLL 191 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPW------PVDWLDNSDSIA 227 + D +VL CT P V +D+ D++A Sbjct: 192 RQQGVDAVVLGCT-------ELALALPAPARPSLGVAVIDSIDALA 230 >gi|332756371|gb|EGJ86722.1| hypothetical protein SF274771_2972 [Shigella flexneri 2747-71] gi|333016336|gb|EGK35667.1| hypothetical protein SFK304_3259 [Shigella flexneri K-304] Length = 42 Score = 59.2 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 17/41 (41%) Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67 ++++ L+P IY D++ PYGN + Sbjct: 2 TSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKC 42 >gi|226325276|ref|ZP_03800794.1| hypothetical protein COPCOM_03068 [Coprococcus comes ATCC 27758] gi|225206624|gb|EEG88978.1| hypothetical protein COPCOM_03068 [Coprococcus comes ATCC 27758] Length = 234 Score = 59.2 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 44/131 (33%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPA 130 L+ I CNT ++++ + +++ + I I+ T Sbjct: 72 LEMLGVENIAIPCNT-SHYFLEDIQKSTSVPIINMVEESVRYVVEAHPKVKKIGIMGTDG 130 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T++ + + + S + + K + K + + + + + Sbjct: 131 TMQAKTYHRACEKFGITPVVPGEACQKDVMSLIYDDIKKGKPGD---KNKFDRAYNDLKA 187 Query: 190 KRTDVIVLACT 200 K D ++LACT Sbjct: 188 KGCDAVILACT 198 >gi|154496370|ref|ZP_02035066.1| hypothetical protein BACCAP_00658 [Bacteroides capillosus ATCC 29799] gi|150274453|gb|EDN01530.1| hypothetical protein BACCAP_00658 [Bacteroides capillosus ATCC 29799] Length = 235 Score = 59.2 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 13/134 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ I CNT D L+ +K ++ + IL+T T Sbjct: 73 LEQVGCTAIAIPCNT-SHFFADRLQGELSIPIIHMVRETVKVLSSDPGVHKVGILATDGT 131 Query: 132 LRRTYTSNLIH-----SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +R ++ + V I+ +++ G + K + + + Sbjct: 132 VRTGVYQRECEAQGLTAFSPPPEVQKVVMSIIYDEIKKGEKGSREKFAVMDRCLRE---- 187 Query: 187 KEGKRTDVIVLACT 200 D +L CT Sbjct: 188 ---AGCDAAILGCT 198 >gi|28378236|ref|NP_785128.1| aspartate racemase [Lactobacillus plantarum WCFS1] gi|300767167|ref|ZP_07077079.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180386|ref|YP_003924514.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271071|emb|CAD63976.1| aspartate racemase [Lactobacillus plantarum WCFS1] gi|300494986|gb|EFK30142.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045877|gb|ADN98420.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 248 Score = 59.2 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 10/142 (7%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122 + +L++ + V+ CNTA L + ++ L AA +Q Sbjct: 64 SLEADVQLLNQLGVMFIVMTCNTA-HYFIPALTA-LSNVPILNMPALAVTAACRSQQPRP 121 Query: 123 --ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I IL+T TL LI S HI ++ + ++V + D + + Sbjct: 122 LRIGILATTGTLESQLYQQLIRS---NGHIPVIPNKQQQAQVMTLIYDDIKQRDFVDRVK 178 Query: 181 EGCFIE--KEGKRTDVIVLACT 200 I+ D ++L CT Sbjct: 179 FHGLIDQLLNAADCDAVILGCT 200 >gi|260582417|ref|ZP_05850209.1| aspartate racemase [Haemophilus influenzae NT127] gi|260094568|gb|EEW78464.1| aspartate racemase [Haemophilus influenzae NT127] Length = 230 Score = 58.8 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 22/167 (13%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ +IACNTA DEL+ I + ++ I IL+T AT Sbjct: 71 LENAGAKCILIACNTA-HYWYDELKEKCHVDMLNIIDSTINEVLQMGKTK-IGILATDAT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK----IKEDEIKKEIEGCFIEK 187 L + Y + ++ E ++ K EI+K E I++ Sbjct: 129 LATKLYQKTLEKY-------GLICLLPNE--EHQKSVMESIYLYKSGEIQKAEELMLIQR 179 Query: 188 EG---KRTDVIVLACTHYPLIVHVFRQLSPWPVDWL-DNSDSIARRA 230 + +VI+L CT PLI + D++ ++ R A Sbjct: 180 DELIRHGAEVIILGCTEIPLI---LKNAMREQPTLYEDSTAALVRAA 223 >gi|145631325|ref|ZP_01787097.1| predicted DNA-binding transcriptional regulator [Haemophilus influenzae R3021] gi|144983110|gb|EDJ90610.1| predicted DNA-binding transcriptional regulator [Haemophilus influenzae R3021] Length = 230 Score = 58.8 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 22/167 (13%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ +IACNTA DEL+ I + ++ I IL+T AT Sbjct: 71 LENAGAKCILIACNTA-HYWYDELKEKCHVDMLNIIDSTINEVLQMGKTK-IGILATDAT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK----IKEDEIKKEIEGCFIEK 187 L + Y + ++ E ++ K EI+K E I++ Sbjct: 129 LATKLYQKTLEKY-------GLICLLPNE--EHQKSVMESIYLYKSGEIQKAEELMLIQR 179 Query: 188 EG---KRTDVIVLACTHYPLIVHVFRQLSPWPVDWL-DNSDSIARRA 230 + +VI+L CT PLI + D++ ++ R A Sbjct: 180 DELIRHGAEVIILGCTEIPLI---LKNAMREQPTLYEDSTAALVRAA 223 >gi|225572984|ref|ZP_03781739.1| hypothetical protein RUMHYD_01175 [Blautia hydrogenotrophica DSM 10507] gi|225039635|gb|EEG49881.1| hypothetical protein RUMHYD_01175 [Blautia hydrogenotrophica DSM 10507] Length = 214 Score = 58.8 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 14/144 (9%) Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY-TSNLIH 142 CN+ + + E+ S + P + A Q ++S+L+ + I Sbjct: 73 CNSLSSTVDMEMLSRKLGIKI--VTPLMAYACYAKQYQVLSVLA--GNNQGLAGIERAIL 128 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 C + S + + +E +I E K + F E + +L CTH+ Sbjct: 129 QSNLSCTVVGASLLPMVVEIEAQTLPEQIVE---KFHLMSLFEFFESAGAEAFILGCTHF 185 Query: 203 PLIVHVFRQLSPWPVD--WLDNSD 224 P R++ V LD +D Sbjct: 186 PY----IRRVLDEKVRIPILDPAD 205 >gi|209520237|ref|ZP_03269006.1| aspartate racemase [Burkholderia sp. H160] gi|209499312|gb|EDZ99398.1| aspartate racemase [Burkholderia sp. H160] Length = 512 Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 14/175 (8%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--- 120 ++ L+ L I CNTA + + +R P++ A ++ Sbjct: 316 ALYAACKNLEDGGADLIAIPCNTAHAFV-ERIR---PALRVPVVNMPGCTADYLRETFPG 371 Query: 121 -GLISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKI--KEDEI 176 + +L+T TL + + Q + L + + G K E Sbjct: 372 LREVGVLATSGTLASRVYEQALDARGFVQVAPSAAAQARLMNAI-YGPHGAKAGHTSGEC 430 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNSDSIARR 229 ++ + + VIVLACT PL+ V V +D +D +ARR Sbjct: 431 CDDLAAAVDDLVAQGVQVIVLACTELPLLLREPVLACPGGRVVRLVDPTDVLARR 485 >gi|146300252|ref|YP_001194843.1| aspartate racemase [Flavobacterium johnsoniae UW101] gi|146154670|gb|ABQ05524.1| aspartate racemase [Flavobacterium johnsoniae UW101] Length = 230 Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 7/139 (5%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GL 122 +F + L V+ NT LI D+L+ + + A + A + Sbjct: 64 LFKGCEFLKSGGAEAIVLCANTM-HLIADKLQEAI-GLPVIHI--AAETAIEIQKQNLKK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T+ + + + + I G I DE KK Sbjct: 120 VGLLGTKFTMELDFFKDKLKQKGIEAVIPASQEDKDFVHYTIFEELGRGIVTDETKKRYL 179 Query: 182 GCFIEKEGKRTDVIVLACT 200 E + I+L CT Sbjct: 180 EIADELIKNGAEGIILGCT 198 >gi|228951342|ref|ZP_04113452.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229189055|ref|ZP_04316083.1| Glutamate racemase [Bacillus cereus ATCC 10876] gi|228594475|gb|EEK52266.1| Glutamate racemase [Bacillus cereus ATCC 10876] gi|228808395|gb|EEM54904.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 80 Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 7/63 (11%), Positives = 18/63 (28%) Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + + V + +++ A +L + H F +G + Sbjct: 1 MIKSELGEAVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVLSFEHIAERWL 60 Query: 268 GLK 270 G + Sbjct: 61 GYQ 63 >gi|228941934|ref|ZP_04104478.1| amino-acid racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974865|ref|ZP_04135427.1| amino-acid racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981458|ref|ZP_04141756.1| amino-acid racemase [Bacillus thuringiensis Bt407] gi|228778283|gb|EEM26552.1| amino-acid racemase [Bacillus thuringiensis Bt407] gi|228784869|gb|EEM32886.1| amino-acid racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817767|gb|EEM63848.1| amino-acid racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942539|gb|AEA18435.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43] Length = 224 Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 8/150 (5%) Query: 52 YGNWEDH-ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA 110 Y + K+ + + L+ + CNTA L +EL+ + S+ L V Sbjct: 49 YMDRPIDHETMKKAIIEGAQKLESTGVDFIAMPCNTA-HLYFEELQRSL-SIPILNIVDE 106 Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 QA + +++L+T AT++ N I I + + + IK Sbjct: 107 TLQAIPEN-TKKVALLATEATVQAGIYQNGIAKRN----IEYIHHEKWQEMINQIITYIK 161 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 E E +E+ + + D ++ACT Sbjct: 162 SGEVEEARELWNALVLQLKDEVDTAIIACT 191 >gi|186474121|ref|YP_001861463.1| aspartate racemase [Burkholderia phymatum STM815] gi|184196453|gb|ACC74417.1| aspartate racemase [Burkholderia phymatum STM815] Length = 487 Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 63/175 (36%), Gaps = 16/175 (9%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 ++ L+ L I CNTA + E R P + + A A + Sbjct: 285 ALYATCRKLEDGGANLIAIPCNTAHAFIAPIEARLRIPIVNMMSV-TADFLRATFPSVLR 343 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-----IKEDEIK 177 I +L+T T+ + + ++ + +RV G + E Sbjct: 344 IGLLATDGTIASGVYREALEARGLA---EVLPPPAMQARVTNAIYGARGVKAGFTSGECV 400 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIAR 228 +I ++ ++I+LACT PL+ + ++ ++D +D +A+ Sbjct: 401 DDIIAAVESLLLQQVEIILLACTELPLLFP--QAITVTRHGRTAQFVDPADVLAK 453 >gi|33598574|ref|NP_886217.1| putative aspartate/glutamate racemase [Bordetella parapertussis 12822] gi|33574703|emb|CAE39360.1| putative aspartate/glutamate racemase [Bordetella parapertussis] Length = 244 Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 18/164 (10%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTP 129 L++ I CNTA +S S+ L V A+ +G + +L+T Sbjct: 80 LEQAGAAAIAIPCNTAHVWYPQLAQSA--SVPVLHIVEAVLDDLRRQGIHAGRVGLLATA 137 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRVEEYACGIKIKEDEIKKEIEGCF 184 TLR + + + + + V V++ + C Sbjct: 138 TTLRLGLYQHEMLAQGYEPVVPPVDLIDGLCAQSIRLVKQNLLPQALPPAL------ACI 191 Query: 185 IEKEGKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIA 227 D IVL CT PL + H R V D+ D++A Sbjct: 192 DSLRAMGVDAIVLGCTELPLALPHALRAELG--VAMTDSIDALA 233 >gi|306480141|emb|CBV36372.1| glutamate racemase [Helicobacter pylori] Length = 105 Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 8/105 (7%) Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDN 222 I E E+ + + +V++L CTH+PLI H + + Sbjct: 1 ENILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHS 60 Query: 223 SDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 D+I + F SG ++ + Sbjct: 61 GDAIVEYLQQ--KYALKKNACAFPKVEFHASGDVIWLEKQAKEWL 103 >gi|89098523|ref|ZP_01171406.1| aspartate racemase [Bacillus sp. NRRL B-14911] gi|89086768|gb|EAR65886.1| aspartate racemase [Bacillus sp. NRRL B-14911] Length = 237 Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 7/149 (4%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 GNWE K M + L+ VI NT L+ ++L+ + + V + Sbjct: 58 GNWEKATEK---MIEAARFLETGGADCIVICTNTM-HLMAEDLQKACR-IPVIHIVECVV 112 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKI 171 + + +L T T+ +T+ ++ + + + + E C K Sbjct: 113 EEIKKQGIEAVGLLGTKFTMEQTFYKKILEEHGIKVLVPEEGDRERVHEVIFEELCRGKF 172 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 KED ++ E K I+L CT Sbjct: 173 KEDSKAAYLD-IIHRLEKKGAQGIILGCT 200 >gi|33603524|ref|NP_891084.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica RB50] gi|33577648|emb|CAE34913.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica RB50] Length = 244 Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 18/164 (10%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTP 129 L++ I CNTA +S S+ L V A+ +G + +L+T Sbjct: 80 LEQAGAAAIAIPCNTAHVWYPQLAQSA--SVPVLHIVEAVLDDLRRQGIHAGRVGLLATA 137 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRVEEYACGIKIKEDEIKKEIEGCF 184 TLR + + + + + V V++ + C Sbjct: 138 TTLRLGLYQHEMLAQGYEPVVPPVDLIDGLCAQSIRLVKQNLLPQALPPAL------ACI 191 Query: 185 IEKEGKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIA 227 D IVL CT PL + H R V D+ D++A Sbjct: 192 DSLRAMGVDAIVLGCTELPLALPHALRAELG--VAMTDSIDALA 233 >gi|18977352|ref|NP_578709.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638] gi|18893031|gb|AAL81104.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638] Length = 228 Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 39/131 (29%), Gaps = 7/131 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K V+ CNTA D++R K+ A+ +L+T T Sbjct: 70 LEKCGADFIVMPCNTAHAF-IDDIRREVGIPVISMIEETAKRIASLGIKKA-GLLATTGT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + Y + L E G + +I E+ Sbjct: 128 IVSGVYHKELEKYGLEILTPTEEEQELVMKGIYEGVKAGNLDLGRNLLLQIARILEER-- 185 Query: 190 KRTDVIVLACT 200 + I+ CT Sbjct: 186 -GAEAIIAGCT 195 >gi|320528690|ref|ZP_08029842.1| aspartate racemase [Solobacterium moorei F0204] gi|320130900|gb|EFW23478.1| aspartate racemase [Solobacterium moorei F0204] Length = 236 Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 48/149 (32%), Gaps = 15/149 (10%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 ++A+ +R++ +L+ I CNT D L+ +K+ Sbjct: 61 ENAVYERMLHDCH-LLESCGSCCIAIPCNT-SHYFADRLQKEISIPIIHMPRETVKRLVK 118 Query: 117 YTQSGLISILSTPATLRRTYTSNLIH-----SYVSQCHIHLVSSMILASRVEEYACGIKI 171 T ++IL+T T+ I ++ I ++ ++ G + Sbjct: 119 -TNHKKVAILATDGTIMTGVYRREIEAAGMQAWQPDAEIQKKVMSLIYDEIKRGEKGNRH 177 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 I + + D +L CT Sbjct: 178 TFAAIDRAVR-------DAGCDCAILGCT 199 >gi|259503804|ref|ZP_05746706.1| aspartate racemase [Lactobacillus antri DSM 16041] gi|259168236|gb|EEW52731.1| aspartate racemase [Lactobacillus antri DSM 16041] Length = 239 Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 25/148 (16%) Query: 66 FLFSDILDK--YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SG 121 L DI + P V+ CNTA D+L++ + L + + + Sbjct: 64 ALIEDIQQQSLLNPAFFVLICNTA-HYAFDQLQAA-TKVPILNMLEETVAEIKRIKPDAK 121 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIK 172 + +L+T T+ I Q + + + E+ + Sbjct: 122 KVGLLATRGTVEAGLYDGYITRAGYQ---EIKPTPEIVDMTEDLIYHDIKEAGHSDGQKY 178 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + +++ +E + DV++L CT Sbjct: 179 HELVRRMVEE-------EGADVVILGCT 199 >gi|306479961|emb|CBV36198.1| glutamate racemase [Helicobacter pylori] Length = 102 Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 8/101 (7%) Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSI 226 E E+ + + +V++L CTH+PLI H + + D+I Sbjct: 2 EGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAI 61 Query: 227 ARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + F SG ++ + Sbjct: 62 VEYLQQ--KYALKKNACAFPKVEFHASGDVIWLEKQAKEWL 100 >gi|313901900|ref|ZP_07835319.1| aspartate racemase [Thermaerobacter subterraneus DSM 13965] gi|313467841|gb|EFR63336.1| aspartate racemase [Thermaerobacter subterraneus DSM 13965] Length = 309 Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 59/177 (33%), Gaps = 26/177 (14%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMA-----------FLGAVPAIKQAAAYTQS 120 L L +I CNTA + D L++ P G P + A Sbjct: 135 LVSLGASLILIPCNTA-HVYFDRLQAASPVPILHIMREVARALVAGGAPGLPPA-----G 188 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE-IKKE 179 G +L+T T+ + + + +R A GIK E ++ Sbjct: 189 GPAGLLATELTVESGLYHRALAEVGLEVVVPAPEYQAEVTRAIFGADGIKAGVYEPARQR 248 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPL-IVHVFRQLSPW-PVDWLDNSDSIARRARCLL 234 + + V++ CT PL + PV W+D ++ +AR A L Sbjct: 249 LLEAGTHLVERGARVLIAGCTELPLVLRP------GDFPVPWVDPAEILARAALQRL 299 >gi|18978047|ref|NP_579404.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638] gi|18893834|gb|AAL81799.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638] Length = 231 Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 68/178 (38%), Gaps = 16/178 (8%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +KR++ + L++ L + NT ++ D+++ S+ + + A+ + Sbjct: 61 RKRILINAAKALERAGAELIALTANTP-HIVFDDIQKEI-SVPMVSIIDAVAEEILSHGL 118 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178 + +L T T+ + N + + + + +R+ EE A + I Sbjct: 119 KKVLLLETKTTMSSGFYVNALKNKGLEVVVPNEEEQEELNRIIFEELAFENLKSKRWIID 178 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLP 235 IE + + + ++L CT PL V ++ D+++ + L+ Sbjct: 179 LIERY---AKEEGVEGVILGCTELPLAVKR-----GDVSIEVFDSAEI---HIKKLIE 225 >gi|254253826|ref|ZP_04947143.1| Aspartate racemase [Burkholderia dolosa AUO158] gi|124898471|gb|EAY70314.1| Aspartate racemase [Burkholderia dolosa AUO158] Length = 233 Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 10/170 (5%) Query: 70 DILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D+L++ L I CNTA RS P + + A A +++L+T Sbjct: 68 DLLNRSGVDLIAIPCNTAHHWYAPLRARSAAPILHIVDTAVAALPAG----VRRVAVLAT 123 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + + + + A + D +++ Sbjct: 124 GGTLASGLYQSALR--ARGIEPVMPGATAQRDIAACIAAVKAGRVDAAGRQLSRALATLV 181 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + DV V+ CT P+ H P+ +D + +AR Sbjct: 182 RRDVDVAVMGCTEIPIAAHALGDA---PLALVDTTHELARATVAYAAERG 228 >gi|225573795|ref|ZP_03782550.1| hypothetical protein RUMHYD_01997 [Blautia hydrogenotrophica DSM 10507] gi|225038823|gb|EEG49069.1| hypothetical protein RUMHYD_01997 [Blautia hydrogenotrophica DSM 10507] Length = 235 Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 44/134 (32%), Gaps = 13/134 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + + ++ CNTA L F + FL + +A + I +L+T T Sbjct: 71 LQSFGADVLIMPCNTAHYFYDRILP--FVDIPFLSMIDETAKAISDRGLRKIGLLATDGT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-----YACGIKIKEDEIKKEIEGCFIE 186 L+ I + ++ A +I KK IE F Sbjct: 129 LQTAVYEKAFKKR--GISIVVPPPENQVHIMDLIYNGVKAGNKEIDTKPTKKTIEDLF-- 184 Query: 187 KEGKRTDVIVLACT 200 K +VL CT Sbjct: 185 --RKGAQTLVLGCT 196 >gi|242238706|ref|YP_002986887.1| aspartate racemase [Dickeya dadantii Ech703] gi|242130763|gb|ACS85065.1| aspartate racemase [Dickeya dadantii Ech703] Length = 236 Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 10/163 (6%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 IL+ ++ CNTA D+L+ + + A Q + +L+T Sbjct: 69 RILENAGASCIIMPCNTA-HYWFDDLK-RHTRTEMISIIDATCQWIDEQSLRHVGLLATT 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+R + + +C + + + Y G ++ + E + Sbjct: 127 ATVRADIYQHALSRQQVRCTLPSQAEQDAVMDSIYAYKAGNF---ALARQLLLPVQTELQ 183 Query: 189 GKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIARRA 230 + + I+L CT PL + P +LD ++++ R+ Sbjct: 184 RQGVEKIILGCTELPLILAPEI---LAAPAAYLDATEALVRKT 223 >gi|229105387|ref|ZP_04236032.1| amino-acid racemase [Bacillus cereus Rock3-28] gi|228678044|gb|EEL32276.1| amino-acid racemase [Bacillus cereus Rock3-28] Length = 258 Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 91 EAMKKAIIEGAQK-LESTGVDFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLRAIPE 147 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + + IK E E Sbjct: 148 T-VKRVALLATEATVQAGIYQDGIAKRN----IEYLHNEKWQEMINQIITCIKSGEVEEA 202 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D ++ACT Sbjct: 203 RKLWSALVLQLKDEIDTAIIACT 225 >gi|229076262|ref|ZP_04209229.1| amino-acid racemase [Bacillus cereus Rock4-18] gi|228706911|gb|EEL59117.1| amino-acid racemase [Bacillus cereus Rock4-18] Length = 235 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 68 EAMKKAIIEGAQK-LESAGVDFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLRAIPE 124 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + + IK E E Sbjct: 125 T-VKRVALLATEATVQAGIYQDGIAKRN----IEYLHNEKWQEMINQIITCIKSGEVEEA 179 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D ++ACT Sbjct: 180 RKLWSALVLQLKDEIDTAIIACT 202 >gi|255658868|ref|ZP_05404277.1| putative aspartate racemase [Mitsuokella multacida DSM 20544] gi|260849273|gb|EEX69280.1| putative aspartate racemase [Mitsuokella multacida DSM 20544] Length = 243 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 21/134 (15%) Query: 76 QPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ CNTA L+ LR + + + A + +L++ T Sbjct: 77 GADFLIMGCNTAHYFLPLMMPNLR-----IPVINMIEETAAFCAREGYKRVGLLASAGTC 131 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI------KKEIEGCFIE 186 + + + + EE G+ + + + Sbjct: 132 KSGIYQRALER--AGVEVVQ-----PQGEAEEAIHGMIYDGVKAGNMGYDTTAVREALAQ 184 Query: 187 KEGKRTDVIVLACT 200 + + VL CT Sbjct: 185 MAAEGCEAFVLGCT 198 >gi|270291607|ref|ZP_06197827.1| aspartate racemase [Pediococcus acidilactici 7_4] gi|270279926|gb|EFA25764.1| aspartate racemase [Pediococcus acidilactici 7_4] Length = 235 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 11/132 (8%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATL 132 + P VIACNTA D+L+ +KQ + I I+ TP T Sbjct: 74 RLNPAFFVIACNTA-HYFYDDLQKATEIPIVHMPRETVKQIKKEFPAAKRIGIIGTPGTT 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILAS----RVEEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + + + + E + ++ +I E+ Sbjct: 133 TDGIYDRELIAEGYEV---VKPTPEIQDLTSKLIFEDIKAQNKVDAQLFYQILRLMTEER 189 Query: 189 GKRTDVIVLACT 200 G + ++L CT Sbjct: 190 GAQV--VILGCT 199 >gi|229099232|ref|ZP_04230164.1| amino-acid racemase [Bacillus cereus Rock3-29] gi|229118246|ref|ZP_04247603.1| amino-acid racemase [Bacillus cereus Rock1-3] gi|228665218|gb|EEL20703.1| amino-acid racemase [Bacillus cereus Rock1-3] gi|228684213|gb|EEL38159.1| amino-acid racemase [Bacillus cereus Rock3-29] Length = 235 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 68 EAMKKAIIEGAQK-LESAGVDFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLRAIPE 124 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + + IK E E Sbjct: 125 T-VKRVALLATEATVQAGIYQDGIAKRN----IEYLHNEKWQEMINQIITCIKSGEVEEA 179 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D ++ACT Sbjct: 180 RKLWSALVLQLKDEIDTAIIACT 202 >gi|33591318|ref|NP_878962.1| putative aspartate/glutamate racemase [Bordetella pertussis Tohama I] gi|33570960|emb|CAE40431.1| putative aspartate/glutamate racemase [Bordetella pertussis Tohama I] gi|332380720|gb|AEE65567.1| putative aspartate/glutamate racemase [Bordetella pertussis CS] Length = 244 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 18/164 (10%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTP 129 L++ I CNTA +S S+ L V A+ +G + +L+T Sbjct: 80 LEQAGATAIAIPCNTAHVWYPQLAQSA--SVPVLHIVEAVLDDLRRQGIHAGRVGLLATA 137 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRVEEYACGIKIKEDEIKKEIEGCF 184 TLR + + + + + V V++ + C Sbjct: 138 TTLRLGLYQHEMLAQGYEPVVPPVDLIDGLCAQSIRLVKQNLLPQALPPAL------ACI 191 Query: 185 IEKEGKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIA 227 D IVL CT PL + H R V D+ D++A Sbjct: 192 DSLRAMGVDAIVLGCTELPLALPHALRAELG--VAMTDSIDALA 233 >gi|229152950|ref|ZP_04281132.1| amino-acid racemase [Bacillus cereus m1550] gi|228630563|gb|EEK87210.1| amino-acid racemase [Bacillus cereus m1550] Length = 235 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 10/151 (6%) Query: 52 YGNWEDH-ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-P 109 Y + K+ + + L+ + CNTA L +EL+ + S+ L V Sbjct: 60 YMDRPIDHETMKKAIIEGAQKLESTGVDFIAMPCNTA-HLYFEELQRSL-SIPILNIVDE 117 Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 +K T+ +++L+T AT++ + I I + + + I Sbjct: 118 TLKTIPENTK--RVALLATEATIQAGIYQDGIIKRN----IEYIHHEKWQEMISQIITSI 171 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 K E E +E+ + + D ++ACT Sbjct: 172 KSGEVEEARELWNTLVLQLKDEVDTAIIACT 202 >gi|306480020|emb|CBV36255.1| glutamate racemase [Helicobacter pylori] Length = 95 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 8/92 (8%) Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235 + +V++L CTH+PLI + + D+I + + Sbjct: 4 RYYFTPLEILPEVVILGCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVKYLQQ--K 61 Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 F SG ++ + Sbjct: 62 YALKKNACAFPKVEFHASGDVVWLEKQAKEWL 93 >gi|290890562|ref|ZP_06553637.1| hypothetical protein AWRIB429_1027 [Oenococcus oeni AWRIB429] gi|290479958|gb|EFD88607.1| hypothetical protein AWRIB429_1027 [Oenococcus oeni AWRIB429] Length = 233 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 9/133 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTP 129 L+ VI CNTA EL + M L QA +G ISIL+T Sbjct: 72 LNSLSADFVVITCNTA-HYFLPELTA-IAKMPILNMPSLAVQACKKRTAGTLKISILATD 129 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEK 187 T+ I + Q I I + ++ +I+ D+ +E I+ Sbjct: 130 GTIASGLYQEKISAQSDQAIIPDKELQIQVMKFIYQDIKQNNRIEADKYHHLVEKLLIK- 188 Query: 188 EGKRTDVIVLACT 200 ++ D ++L CT Sbjct: 189 --QKCDYVILGCT 199 >gi|207093195|ref|ZP_03240982.1| glutamate racemase [Helicobacter pylori HPKX_438_AG0C1] Length = 105 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 8/103 (7%) Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSD 224 I E E+ + + +VI+L CTH+PLI + + D Sbjct: 3 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHSGD 62 Query: 225 SIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 +I + F SG ++ + Sbjct: 63 AIVEYLQQ--KYALKKNACAFPKVEFHASGDVVWLEKQAKEWL 103 >gi|116491073|ref|YP_810617.1| aspartate racemase [Oenococcus oeni PSU-1] gi|118586271|ref|ZP_01543727.1| aspartate racemase [Oenococcus oeni ATCC BAA-1163] gi|116091798|gb|ABJ56952.1| aspartate racemase [Oenococcus oeni PSU-1] gi|118433287|gb|EAV39997.1| aspartate racemase [Oenococcus oeni ATCC BAA-1163] Length = 233 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 9/133 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTP 129 L+ VI CNTA EL + M L QA +G ISIL+T Sbjct: 72 LNSLSADFVVITCNTA-HYFLPELTA-IAKMPILNMPSLAVQACKKRTAGTLKISILATD 129 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEK 187 T+ I + Q I I + ++ +I+ D+ +E I+ Sbjct: 130 GTIASGLYQEKISAQSDQAIIPDKELQIQVMKFIYQDIKQNNRIEADKYHHLVEKLLIK- 188 Query: 188 EGKRTDVIVLACT 200 ++ D ++L CT Sbjct: 189 --QKCDYVILGCT 199 >gi|56460878|ref|YP_156159.1| aspartate racemase [Idiomarina loihiensis L2TR] gi|56179888|gb|AAV82610.1| Aspartate racemase [Idiomarina loihiensis L2TR] Length = 229 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VIA NT + T ++ L V A+ + +L T T Sbjct: 71 LESAGAECIVIATNTMHKVAPQI--ETAVTIPLLHIVDAVAAHLKQNSVHNVGLLGTRFT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +++ + + Q + I + ++ ++ + Sbjct: 129 MQQPFYKERLEQNNVQVLVPEEEDSITVDSIIFKELCHGQFTEKAREHYLRVIDSLAERG 188 Query: 192 TDVIVLACT 200 ++L CT Sbjct: 189 AQGVILGCT 197 >gi|302391310|ref|YP_003827130.1| aspartate racemase [Acetohalobium arabaticum DSM 5501] gi|302203387|gb|ADL12065.1| aspartate racemase [Acetohalobium arabaticum DSM 5501] Length = 248 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 66/166 (39%), Gaps = 14/166 (8%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP--AIKQAAAYTQSGLISILSTP 129 L + + CNTA DE+ + + FL + A + Y + +L+T Sbjct: 71 LQQLGADYLAMPCNTA-HYFYDEVV-RYMDIPFLNMIEEVAAEVDRKYGNDSKVGLLATT 128 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIK-KEIEGCFIEK 187 T + ++ + ++L++ V + +K D+IK + + E Sbjct: 129 GTYQVGIYEKVLQ----ESGVNLITPDESGKEAVYDVIYKVKEGFDDIKFQSVNNLLAEM 184 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 + + V++L CT PLI +D++D ++ +A+R Sbjct: 185 KKQGVSVVILGCTELPLIKDK----LDSEIDYMDCTEILAQRIVDY 226 >gi|184154717|ref|YP_001843057.1| aspartate racemase [Lactobacillus fermentum IFO 3956] gi|260663254|ref|ZP_05864146.1| aspartate racemase [Lactobacillus fermentum 28-3-CHN] gi|183226061|dbj|BAG26577.1| aspartate racemase [Lactobacillus fermentum IFO 3956] gi|260552446|gb|EEX25497.1| aspartate racemase [Lactobacillus fermentum 28-3-CHN] Length = 237 Score = 56.5 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 17/133 (12%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS-GLISILSTPATLR 133 QP V+ CNTA +L++ + L +K+ + +L+TP T+ Sbjct: 76 QPEFFVLICNTA-HYFFKDLQAA-TEIPILNMLEETVKEIKKIKPDAKKVGLLATPGTVE 133 Query: 134 RTYTSNLIH----SYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEIEGCFIEK 187 + I + L ++ L E + ++K +E Sbjct: 134 SGIYDHYIQAAGYEELKPTQEILDATEDLIYHDIKEAGHSDGAKYHELVRKMVEE----- 188 Query: 188 EGKRTDVIVLACT 200 + DV++L CT Sbjct: 189 --QGADVVILGCT 199 >gi|227513984|ref|ZP_03944033.1| aspartate racemase [Lactobacillus fermentum ATCC 14931] gi|227087628|gb|EEI22940.1| aspartate racemase [Lactobacillus fermentum ATCC 14931] Length = 241 Score = 56.5 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 17/133 (12%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS-GLISILSTPATLR 133 QP V+ CNTA +L++ + L +K+ + +L+TP T+ Sbjct: 80 QPEFFVLICNTA-HYFFKDLQAA-TEIPILNMLEETVKEIKKIKPDAKKVGLLATPGTVE 137 Query: 134 RTYTSNLIH----SYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEIEGCFIEK 187 + I + L ++ L E + ++K +E Sbjct: 138 SGIYDHYIQAAGYEELKPTQEILDATEDLIYHDIKEAGHSDGAKYHELVRKMVEE----- 192 Query: 188 EGKRTDVIVLACT 200 + DV++L CT Sbjct: 193 --QGADVVILGCT 203 >gi|254173547|ref|ZP_04880219.1| aspartate racemase [Thermococcus sp. AM4] gi|214032239|gb|EEB73069.1| aspartate racemase [Thermococcus sp. AM4] Length = 226 Score = 56.5 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 64/168 (38%), Gaps = 15/168 (8%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +KR++ + L++ + + NT ++ +++ S+ + + A+ + Sbjct: 58 RKRILINAARALERAGAEVIALTANTP-HIVFPDVQRAV-SVPMVSIIDALIEEMKRRGV 115 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178 + +L T T+ + + + + + +R+ EE A + + Sbjct: 116 RKVLLLGTKTTMTADFYREALLKAGFEVVVPEGDEIEEVNRIIFEELAFEDLRSKPYLLS 175 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSD 224 +E +E + + ++L CT PL R P V+ D ++ Sbjct: 176 LVERY---REERGIEGVILGCTELPL---AIR---PGDVPVEVFDTAE 214 >gi|307324785|ref|ZP_07603991.1| aspartate racemase [Streptomyces violaceusniger Tu 4113] gi|306889667|gb|EFN20647.1| aspartate racemase [Streptomyces violaceusniger Tu 4113] Length = 238 Score = 56.5 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 18/158 (11%) Query: 82 IAC--NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 IAC NT + S+ FL I AA T++ + +L T + + + Sbjct: 79 IACGSNTMHRVAPAI--EAAVSIPFLHIADVIAHAAHQTRARTLGLLGTLPVMEANFYRD 136 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + + + L R+ I D+ + + + + D I+L C Sbjct: 137 RLADHGLSAVVPEQDDRTLVDRIIFDELTRNIFTDDSRAQYLRVMEQLAARGADAIILGC 196 Query: 200 THYPLIVHVFRQLSPWP----VDWLDNSDSIARRARCL 233 T QL + LD+ A + Sbjct: 197 T-------EITQLIGPQDFPSLPLLDS---TALHVESI 224 >gi|163756473|ref|ZP_02163586.1| aspartate racemase [Kordia algicida OT-1] gi|161323581|gb|EDP94917.1| aspartate racemase [Kordia algicida OT-1] Length = 229 Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 8/161 (4%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 L +M + L+K +I NT L D +R + S+ + A + Sbjct: 58 DLLDDIMAETAKSLEKAGAECILICANTM-HLTIDAVRKSV-SIPVIHIAEATAEKILEK 115 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 + I++L T T+ + + ++ S+ + I + RV + ++ ++ Sbjct: 116 KLNTIALLGTKYTMEKDFYKAVLASFGIKTLIPNEAEREEVHRVIYEELSKGMLKESSRE 175 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219 + + + ++L CT PL+ +Q V Sbjct: 176 AYVNIIERLQKEGAEGVILGCTEIPLL---IQQ---EDVAI 210 >gi|304384561|ref|ZP_07366907.1| aspartate racemase [Pediococcus acidilactici DSM 20284] gi|304328755|gb|EFL95975.1| aspartate racemase [Pediococcus acidilactici DSM 20284] Length = 235 Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 11/132 (8%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATL 132 + P VIACNTA D+L+ +KQ + I I+ TP T Sbjct: 74 RLNPAFFVIACNTA-HYFYDDLQKATEFPIVHMPRETVKQIKKEFPAAKRIGIIGTPGTT 132 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILAS----RVEEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + + + + E + ++ +I E+ Sbjct: 133 TDGIYDRELIAEGYEV---VKPTPEIQDLTSKLIFEDIKAQNKVDAQLFYQILRLMTEER 189 Query: 189 GKRTDVIVLACT 200 G + ++L CT Sbjct: 190 GAQV--VILGCT 199 >gi|268317965|ref|YP_003291684.1| aspartate racemase [Rhodothermus marinus DSM 4252] gi|262335499|gb|ACY49296.1| aspartate racemase [Rhodothermus marinus DSM 4252] Length = 254 Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 62/182 (34%), Gaps = 22/182 (12%) Query: 66 FLFSDILDKYQPVLSVIA--CNTAFT-----LIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + I V+ CNTA ++ +EL T + L + + Sbjct: 66 AIAEQIRMAESVGAVVVGIPCNTAHAPSIFNVMLEELARTGSRVRVLHLIEETVRFLREH 125 Query: 119 --QSGLISILSTPATLRRTYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKED 174 + +LST AT R + + + I V I+ + + + GIK + Sbjct: 126 YPDVKRVGVLSTLATYRLGLYRKALEAAGYEAVIADESVQETIVNRAIFDPSYGIKAQSH 185 Query: 175 EIKKEIEGCFI----EKEGKRTDVIVLACTHYPLIVHVFRQLSPW--PVDWLDNSDSIAR 228 + K + K + +VL CT PL V P + +D S ++AR Sbjct: 186 PVSKIARQSVLTGIEHLRQKGVEAVVLGCTELPLAVPE-----PEVDGIPIIDPSLALAR 240 Query: 229 RA 230 Sbjct: 241 AL 242 >gi|194468062|ref|ZP_03074048.1| aspartate racemase [Lactobacillus reuteri 100-23] gi|194452915|gb|EDX41813.1| aspartate racemase [Lactobacillus reuteri 100-23] Length = 239 Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 23/136 (16%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133 P V+ CNTA D+L++ + L + + + + +L+T TL Sbjct: 76 NPAFFVLICNTA-HYSFDKLQAA-TEIPILNMLQETVNEIKKIKPDTKRVGLLATKGTLA 133 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIKEDEIKKEIEGCF 184 I + + + +A E+ + ++K IE Sbjct: 134 ANLYDPYIEKAGYEL---IKPTPEIAEMTEDLIYHDIKEAGHSDGNKYHELVRKMIEE-- 188 Query: 185 IEKEGKRTDVIVLACT 200 + DV+VL CT Sbjct: 189 -----QGADVVVLGCT 199 >gi|229032411|ref|ZP_04188381.1| amino-acid racemase [Bacillus cereus AH1271] gi|228728913|gb|EEL79919.1| amino-acid racemase [Bacillus cereus AH1271] Length = 225 Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 71/185 (38%), Gaps = 17/185 (9%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 57 EAMKKAIIEGAQK-LESTGVEFIAMPCNTA-HLYFEELQHSL-SIPVLNIVDETLQAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + +++L+T AT++ + I I + + + + IK E E Sbjct: 114 N-TKRVALLATEATIQAGIYQDGITKRN----IEYIHHEKWQTMINQIITCIKGGEIEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 +E+ + + D ++ACT ++ ++D++ +A + + Sbjct: 169 RELWSVLVVQLKAEVDTAIIACT-------DLNVVAGED--FVDSAQCLAEAVVRMYAKN 219 Query: 238 NTHQT 242 ++ Sbjct: 220 GSNPN 224 >gi|115361170|ref|YP_778307.1| aspartate racemase [Burkholderia ambifaria AMMD] gi|115286498|gb|ABI91973.1| aspartate racemase [Burkholderia ambifaria AMMD] Length = 234 Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 28/192 (14%) Query: 56 EDHALKKRLMF----LFSDILDKYQPVL-------SVIACNTAFTLIKDELRSTFPSMAF 104 + +++R + D+L L ++ACNT T + + F Sbjct: 46 DFEEIERRQREGRWDIVGDLLAAEGNKLKAAGADFFLLACNTVHTAAERI--EANVDLPF 103 Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILA--SR 161 + V ++ + +L + T+ TY S L Y I + Sbjct: 104 IHIVDPTARSVLERGYKTVGLLGSRYTMTGTYFVSRLKDRYGLDVVIAEGEHQENVHNAL 163 Query: 162 VEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP-LIVHVFRQLSPWPVDWL 220 EE A GI + E +++ + + +VIVL CT + L+ PV + Sbjct: 164 YEELAKGIFL--PETREKFRRAIADLVSRGAEVIVLGCTEFGMLVKPE-----DSPVPII 216 Query: 221 DN----SDSIAR 228 D +++ R Sbjct: 217 DTTIAHAEAAVR 228 >gi|266623105|ref|ZP_06116040.1| aspartate racemase [Clostridium hathewayi DSM 13479] gi|288865142|gb|EFC97440.1| aspartate racemase [Clostridium hathewayi DSM 13479] Length = 235 Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 48/137 (35%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ ++ L K VI NT ++ +++S + L A + + Sbjct: 63 ILGEAAESLQKAGADFIVICTNTMHKVV-PQIQSKI-HIPILHIAEAAALRLKAERMDRV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + Y + I S + +RV I + K+ Sbjct: 121 GLLGTKYTMTQDFYKGKLAEYGVEVLIPEASEIETVNRVIYGELCRGILSETSKEAYLTI 180 Query: 184 FIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 181 IAHLKERGAQGVILGCT 197 >gi|84497910|ref|ZP_00996707.1| hypothetical protein JNB_17523 [Janibacter sp. HTCC2649] gi|84381410|gb|EAP97293.1| hypothetical protein JNB_17523 [Janibacter sp. HTCC2649] Length = 229 Score = 55.7 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ ++ L + ++A NT + DEL+ + L + A + Sbjct: 63 ILARAAEGLARGGAEALLVATNTMHKVA-DELQQA-SGLPLLHIADSTADAIVADGVSRV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T+ + + + + + + R+ + + DE + Sbjct: 121 GLLATAFTMEQDFYVGRLRAKGLEVIVPDAPQRAEVHRIIYDELCLDVVLDESRAAYRDV 180 Query: 184 FIEKEGKRTDVIVLACT 200 + ++L CT Sbjct: 181 MASLVERGAQAVILGCT 197 >gi|148543519|ref|YP_001270889.1| aspartate racemase [Lactobacillus reuteri DSM 20016] gi|184152925|ref|YP_001841266.1| aspartate racemase [Lactobacillus reuteri JCM 1112] gi|227363526|ref|ZP_03847646.1| aspartate racemase [Lactobacillus reuteri MM2-3] gi|325681867|ref|ZP_08161385.1| aspartate racemase [Lactobacillus reuteri MM4-1A] gi|148530553|gb|ABQ82552.1| aspartate racemase [Lactobacillus reuteri DSM 20016] gi|183224269|dbj|BAG24786.1| aspartate racemase [Lactobacillus reuteri JCM 1112] gi|227071463|gb|EEI09766.1| aspartate racemase [Lactobacillus reuteri MM2-3] gi|324978511|gb|EGC15460.1| aspartate racemase [Lactobacillus reuteri MM4-1A] Length = 236 Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 47/136 (34%), Gaps = 23/136 (16%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS-GLISILSTPATLR 133 P V+ CNTA D+L++ + L + + + + +L+T TL Sbjct: 76 NPAFFVLICNTA-HYSFDKLQAA-TEIPILNMLQETVNEIKKIKPDAKRVGLLATKGTLA 133 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIKEDEIKKEIEGCF 184 I + + + +A E+ K + ++K IE Sbjct: 134 ANLYDPYIEKAGYEL---IKPTPEIADMTEDLIYHDIKEAGHSDGKKYHELVRKMIEE-- 188 Query: 185 IEKEGKRTDVIVLACT 200 + DV+VL CT Sbjct: 189 -----QGVDVVVLGCT 199 >gi|307944396|ref|ZP_07659737.1| hypothetical protein TRICHSKD4_3058 [Roseibium sp. TrichSKD4] gi|307772742|gb|EFO31962.1| hypothetical protein TRICHSKD4_3058 [Roseibium sp. TrichSKD4] Length = 973 Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 40/323 (12%), Positives = 68/323 (21%), Gaps = 127/323 (39%) Query: 6 YPCEKKLQNSILIFDSGIGG-----LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60 P + L ++ DSGIGG L V +R V P G+ + + Sbjct: 30 RPGYQNL-GTVGFVDSGIGGAMAAGL-VEGHVRE---------FGSQVALPIGDKHPNQI 78 Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAF-------------------------------- 88 + + + L ++IACNTA Sbjct: 79 ETFTAQMVAQSLIVDGHEYAIIACNTASCKKEKAVEHLENFIKREAGRSDDESQLSGPAR 138 Query: 89 ------TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--------LISILSTPATLRR 134 + P ++AA + I I ST T+ Sbjct: 139 ARVLELAAKLEADPDYIKDRVLSIVEPTAERAAQKAVNAFNNGESSYSILIDSTDGTVNS 198 Query: 135 TYTSNLIHS---------------------------------------YVSQCHIHLVSS 155 IH+ I + Sbjct: 199 KAYPEAIHAAMVKEGFTPVGEPVVVESKDENGQSAVRKTAYTYRNDKGEEKVVAITSRGN 258 Query: 156 MILASRVEEYACGIKI-------KEDEIKK---------------EIEGCFIEKEGKRTD 193 +E ++ ++ + F + Sbjct: 259 PAWVPAIEAGQLSDPATDGQGTRADELVRNSRARSNELQFGEPNTHLNAAFADPPDLNM- 317 Query: 194 VIVLACTHYPLIVHVFRQLSPWP 216 L CTHYP + + Sbjct: 318 ---LCCTHYPAMRSALQSDYGED 337 >gi|59712154|ref|YP_204930.1| aspartate racemase [Vibrio fischeri ES114] gi|59480255|gb|AAW86042.1| aspartate racemase [Vibrio fischeri ES114] Length = 236 Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 72/218 (33%), Gaps = 52/218 (23%) Query: 12 LQNSILIFDSGIGGL----IV---LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 + + I +GG+ V L+ + P ++ D P + R Sbjct: 1 MNKKLGI----LGGMGPLATVEFMLK-IISQTPAHN-----DQEHIPMVVSSVPQIPDRT 50 Query: 65 MFLFS-------------DILDKYQPVLSVIACNTA-------FTLIKDELRSTFPSMAF 104 F+ + L++ VI CNTA + Sbjct: 51 AFIMGHGQDPYPELKHSFEQLERSGAECIVIPCNTAHYWYPQLSATS---------HVHT 101 Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR-VE 163 + + ++ Q A + + +L+T AT++ ++ Y HI ++ + + R V Sbjct: 102 ISIIDSVVQEAQNRRYKTVGLLATTATMKARMYQQKLNQY----HIEVIETDDIQQRDVM 157 Query: 164 EYACGIKIKEDEIKKEI-EGCFIEKEGKRTDVIVLACT 200 + +K E K + F + + ++L CT Sbjct: 158 QGIYEVKAGNVEKGKALMLPVFESMLAQGAEAVILGCT 195 >gi|290473194|ref|YP_003466059.1| putative aspartate/glutamate racemase [Xenorhabdus bovienii SS-2004] gi|289172492|emb|CBJ79259.1| putative aspartate/glutamate racemase [Xenorhabdus bovienii SS-2004] Length = 243 Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 66/191 (34%), Gaps = 10/191 (5%) Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114 +D+ + ++ L + + +I NT D L S ++ + + A Sbjct: 54 RDDNETEFNILSKAVHQLAQAEVKKILICSNTTSNTC-DRL-SKLVNIPIINIIDATANK 111 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKI 171 + + ++ T + R + + ++ + I+ + + C + Sbjct: 112 LLSMKVSNVGLIGTQYVMERDFYKKRLE--AKGINVLIPRSRTRQIIHDSIYQDLCRYAL 169 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 D + + E + ++L CT PL+V ++ + +D+ D+ A Sbjct: 170 T-DTSRGIMYRAIDELAELGAEAVILGCTEIPLVVSD--RVYQNSIKIIDSIDAHIEAAL 226 Query: 232 CLLPRINTHQT 242 L P N + Sbjct: 227 SLTPENNNTSS 237 >gi|186470440|ref|YP_001861758.1| aspartate racemase [Burkholderia phymatum STM815] gi|184196749|gb|ACC74712.1| aspartate racemase [Burkholderia phymatum STM815] Length = 499 Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 12/144 (8%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122 ++ L++ + I CNTA ++ + + + + + G Sbjct: 306 SLYATCKRLEEGDADIIAIPCNTAHAFVERI--QPHLGIPIVNMLTETVRFVRESWPGYR 363 Query: 123 -ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-----IKEDEI 176 I +L+T T+ + S + + L +RV E G Sbjct: 364 DIGVLATSGTISSGVYEKALQSQGLR-QVT--PGEALQTRVMEAIYGNNGVKAGFTTGRC 420 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 +++I + ++I+L CT Sbjct: 421 QEDIAAAVEGMIAEGVEIIILGCT 444 >gi|206896546|ref|YP_002247561.1| aspartate racemase [Coprothermobacter proteolyticus DSM 5265] gi|206739163|gb|ACI18241.1| aspartate racemase [Coprothermobacter proteolyticus DSM 5265] Length = 239 Score = 55.3 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 71/170 (41%), Gaps = 16/170 (9%) Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQSGLISIL 126 + +L+ +ACNTA + + ++++ + F+ V ++ + ++Q+ I + Sbjct: 71 ARLLESAGVNAICMACNTA-HIFESDIKAHI-HVDFISIVDSVLNELKGTFSQAKSIGLA 128 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI---EGC 183 T + + ++ + L E IK+ IK+ I E Sbjct: 129 GTMGVFSSHLYDEPLMQRGYKL---ILPTNELQE--ELMKVIYSIKQGCIKEVIDKAEEL 183 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 + ++ DV+++ACT PL++ P+ +D+++++A+ Sbjct: 184 LQWYKDQKADVLIMACTELPLVLDYLV----PPIPVVDSTEALAKSVVRY 229 >gi|312870649|ref|ZP_07730759.1| aspartate racemase [Lactobacillus oris PB013-T2-3] gi|311093815|gb|EFQ52149.1| aspartate racemase [Lactobacillus oris PB013-T2-3] Length = 239 Score = 55.3 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 51/148 (34%), Gaps = 25/148 (16%) Query: 66 FLFSDILDK--YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SG 121 L DI + P V+ CNTA D+L++ ++ L + + + Sbjct: 64 ALIEDIQQQSLLNPAFFVLICNTA-HYAFDQLQAA-TTIPILNMLEETVAEIKRIKPDAK 121 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIK 172 + +L+T T+ I + + + + E+ + Sbjct: 122 KVGLLATRGTVEAGLYDGYITKAGYE---EIKPTPEILDMTEDLIYHDIKEAGHSDGQKY 178 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + ++K +E + DV++L CT Sbjct: 179 HELVRKMVEE-------EGADVVILGCT 199 >gi|104774694|ref|YP_619674.1| aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|300812326|ref|ZP_07092762.1| aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313124623|ref|YP_004034882.1| aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|103423775|emb|CAI98781.1| Aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|300496746|gb|EFK31832.1| aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312281186|gb|ADQ61905.1| Aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325126515|gb|ADY85845.1| Aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus 2038] gi|325684939|gb|EGD27083.1| aspartate racemase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 249 Score = 55.3 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127 K P V+ CNTA D+L + + FL ++ A + S I +++ Sbjct: 73 AKLGPDFMVMPCNTA-HYFYDDL-AALTDIPFLHM---MRIAVHQYVDQFPNSPKIGLIA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T ++ + IH + + V E ++ + KE+ + K Sbjct: 128 TEGSIYDHLYEDEIHRVGREVE---FGGPEIQPMVTELIYRDIKEKGIVDKELYHEILRK 184 Query: 188 --EGKRTDVIVLACT 200 + DVI+L CT Sbjct: 185 MHDEYGCDVILLGCT 199 >gi|284161291|ref|YP_003399914.1| aspartate racemase [Archaeoglobus profundus DSM 5631] gi|284011288|gb|ADB57241.1| aspartate racemase [Archaeoglobus profundus DSM 5631] Length = 227 Score = 55.3 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 54/144 (37%), Gaps = 6/144 (4%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + IL+ +I NT + D ++S ++ L + + + + Sbjct: 63 ILAEKAKILENAGADFILICTNTMHKVA-DYVQSRI-NVPLLSIIDCVAREVVKRGIKRV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIE 181 +L T T+ + + + Y + I R+ EE GI K+++ Sbjct: 121 GLLGTKFTMEDGFYEDGLRKYGLEVVIPDEEDRNEVHRIIFEELCRGIFKDSS--KRKLI 178 Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205 + K + ++L CT PL+ Sbjct: 179 EIIERLKMKGAEGVILGCTELPLL 202 >gi|52140751|ref|YP_086078.1| aspartate racemase [Bacillus cereus E33L] gi|51974220|gb|AAU15770.1| aspartate racemase [Bacillus cereus E33L] Length = 224 Score = 55.3 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK E E Sbjct: 114 TA-KKVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +E+ + + D +++ACT Sbjct: 169 RELWSALVLQLKDEVDTVIIACT 191 >gi|187919407|ref|YP_001888438.1| aspartate racemase [Burkholderia phytofirmans PsJN] gi|187717845|gb|ACD19068.1| aspartate racemase [Burkholderia phytofirmans PsJN] Length = 233 Score = 55.3 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 18/166 (10%) Query: 70 DILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D+L++ L I CN+A + RS P + A A A+A +++L T Sbjct: 68 DLLNRNGVGLIAIPCNSAHHWYAQIAARSAAPVLHIAEACVAAVPASA----RRVAVLGT 123 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL+ + + + + + S ++ + Sbjct: 124 GGTLKSGFYQAALS--ARDIEPLVPGADLQQSIATCIREVKAGALEQAAGHLSTVLGALA 181 Query: 189 GKRTDVIVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRA 230 + V+ACT R LS P+ +D+S +AR Sbjct: 182 AQDVRAAVMACT-------EIPVAARHLSNPPLTLIDSSLELARAT 220 >gi|307130332|ref|YP_003882348.1| putative aspartate racemase [Dickeya dadantii 3937] gi|306527861|gb|ADM97791.1| Probable aspartate racemase [Dickeya dadantii 3937] Length = 256 Score = 55.3 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 82/255 (32%), Gaps = 48/255 (18%) Query: 22 GIGGL-IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL--KKRLMFLFS------- 69 G+G L V LQK+ P D P W + ++R + Sbjct: 15 GMGPLATVDLLQKIIAATPAER-----DQQHVPVAVWNVPQIPDRQRALAGIGASPLPAL 69 Query: 70 ----DILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGA-VPAIKQAAAYTQSGL 122 + L++ +I CNTA DEL++ P + + + A A T S Sbjct: 70 LDGVERLNRLDISHLIIPCNTA-HHWFDELQAASRAPVLHIADVTLIQAQAALADTSSPR 128 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +++T TL + + + + + + G + ++ Sbjct: 129 VGLIATHGTLAAGWYQRRLAALDIETVLPDEQEMDNLFVPGCYAVKRGDVAAGGGLFGQL 188 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP--------WPVDWLDNSDSIARRARC 232 + ++LACT +++P W +D+++++AR Sbjct: 189 AERLAARGATH---LILACT----------EVAPGLAAMQSRWLARSIDSTEALARHCVA 235 Query: 233 LLPRINTHQTRVFDD 247 L + D Sbjct: 236 LWREQAGGNEKPPDG 250 >gi|157960769|ref|YP_001500803.1| aspartate racemase [Shewanella pealeana ATCC 700345] gi|157845769|gb|ABV86268.1| aspartate racemase [Shewanella pealeana ATCC 700345] Length = 230 Score = 55.3 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 49/165 (29%), Gaps = 13/165 (7%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + + +I NT + DE+++ S+ L A Sbjct: 61 AEILSDAAKNVAAGGADFLLICTNTMHKVA-DEIQAQL-SIPILHIADATAAKLVANGVT 118 Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L T T+ + + LI+ + + + + L +V + K++ Sbjct: 119 RVGLLGTRFTMEQDFYKSRLINQFGIEVIVPNEAERNLVHQVIYEELCQGVVNSTSKQQY 178 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222 + ++L CT L V D Sbjct: 179 LDIVNALHAQGAQAVILGCT-------EIALLVGQQDTQVPLYDT 216 >gi|14521575|ref|NP_127051.1| aspartate racemase [Pyrococcus abyssi GE5] gi|5458794|emb|CAB50281.1| racD-1 aspartate racemase [Pyrococcus abyssi GE5] Length = 228 Score = 55.3 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 12/150 (8%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G L K L++ ++ CNTA +++R + + + Sbjct: 56 GEDPRPELIKTAKK-----LEECGADFIIMPCNTAHAF-IEDIRKAIR-IPIISMIEETA 108 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKI 171 + + +L+T T+ Y + L+ V + G+K Sbjct: 109 KKVKELGFKKVGLLATTGTIASGVYEKEFSKY--GIEV-LIPREDEQEEVMKGIYDGVKA 165 Query: 172 KEDEI-KKEIEGCFIEKEGKRTDVIVLACT 200 E+ K+ + + E + + I+ CT Sbjct: 166 GNLELGKELLIKIARKLEERGAECIIAGCT 195 >gi|172065416|ref|YP_001816128.1| aspartate racemase [Burkholderia ambifaria MC40-6] gi|171997658|gb|ACB68575.1| aspartate racemase [Burkholderia ambifaria MC40-6] Length = 205 Score = 55.3 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 20/184 (10%) Query: 61 KKRLMFLFSDILDKYQPVL-------SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 ++ + D+L L ++ACNT T + + F+ V + Sbjct: 26 REGRWDIVGDLLAAEGNKLKAAGADFFLLACNTVHTAAERI--EANVDLPFIHIVDPTAR 83 Query: 114 AAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA--SRVEEYACGIK 170 + + +L + T+ TY L Y I + EE A GI Sbjct: 84 SVLERGYKTVGLLGSRYTMTGTYFVGRLKDRYGLDVVIAEGEHQENVHNALYEELAKGIF 143 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDNSDSIARR 229 + E +++ + + +VIVL CT + L+ PV +D S + A Sbjct: 144 L--PETREKFRRAIADLVSRGAEVIVLGCTEFGMLVKPE-----DSPVPIIDTSIAHAEA 196 Query: 230 ARCL 233 A L Sbjct: 197 AVRL 200 >gi|218905985|ref|YP_002453819.1| probable amino-acid racemase [Bacillus cereus AH820] gi|218539387|gb|ACK91785.1| probable amino-acid racemase [Bacillus cereus AH820] Length = 224 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 17/176 (9%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK E E Sbjct: 114 TA-KRVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 +E+ + + D ++ACT ++ D++D+S +A+ + Sbjct: 169 RELWSALVLQLKDEVDTAIIACTDLNVLASE---------DFVDSSQCLAKAVVRM 215 >gi|306479692|emb|CBV35939.1| glutamate racemase [Helicobacter pylori] Length = 94 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 8/92 (8%) Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235 + +VI+L CTH+PLI + + D+I + Sbjct: 3 RYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHSGDAIVEYLQQ--K 60 Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 T F SG ++ + Sbjct: 61 YALKKNTHAFPKVEFHASGDVIWLEKQAKEWL 92 >gi|50120438|ref|YP_049605.1| aspartate racemase [Pectobacterium atrosepticum SCRI1043] gi|49610964|emb|CAG74409.1| probable aspartate racemase [Pectobacterium atrosepticum SCRI1043] Length = 238 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 8/162 (4%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 IL+ +I CNTA +EL+ S + + QA T + + +L+T Sbjct: 69 KILENAGAECIIIPCNTA-HYWFNELKQQC-SAEMISIIDVTCQAIRNTNTTRVGLLATT 126 Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT++ R Y NLI + + + Y G + ++ ++ Sbjct: 127 ATVKARIYQDNLITDNIECYTPDDADQHQVMESIYAYKSGDIAGAYSMLSPVKDRLLQ-- 184 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + I+L CT PLI+ ++SP ++D ++ + ++ Sbjct: 185 -AGVEKIILGCTELPLILEQEVRISPQH--YVDATEELIKKT 223 >gi|229175471|ref|ZP_04302982.1| amino-acid racemase [Bacillus cereus MM3] gi|228608003|gb|EEK65314.1| amino-acid racemase [Bacillus cereus MM3] Length = 224 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 57 EAMKKAIIEGAQK-LESTGVSFIAMPCNTA-HLYFEELQRSI-SIPILNIVDETLQAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK E E Sbjct: 114 TA-KKVTLLATEATIQAGIYQDGITKRN----IEYIHHEKWQEMISQIITFIKSGEVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +E+ + + + D +++ACT Sbjct: 169 RELWNALVLQLREEVDTVIIACT 191 >gi|73541409|ref|YP_295929.1| aspartate racemase [Ralstonia eutropha JMP134] gi|72118822|gb|AAZ61085.1| aspartate racemase [Ralstonia eutropha JMP134] Length = 233 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 16/165 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 D+L++ Q L VI CN+ +LR S L AA + +++L+T Sbjct: 68 DLLNRNQVGLVVIPCNS-SHHWYRQLRER-SSAPILHIASTCV-AALPHGTRRVAVLATR 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 L + + Q + + + + + ++ Sbjct: 125 GALASRIYQDALAERDIQPVVPDEAEQVQVDTC--IRSVKAGAFEAAGEALQAVLASLAA 182 Query: 190 KRTDVIVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRA 230 + V ++ CT RQL P+ +D++ +AR Sbjct: 183 RNIGVAIMGCT-------EIPVALRQLRSAPLTMIDSTLELARAT 220 >gi|332654847|ref|ZP_08420589.1| aspartate racemase [Ruminococcaceae bacterium D16] gi|332516190|gb|EGJ45798.1| aspartate racemase [Ruminococcaceae bacterium D16] Length = 239 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 7/145 (4%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + +RL+ +L+ + CNT D ++ S+ + + + Sbjct: 61 KDEVYERLLSDA-RMLEGAGCTAIAVPCNT-SHYFLDRVQEQI-SIPIVHMIRETARLLV 117 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDE 175 IL+T T+R ++ ++ S + + K + E Sbjct: 118 SQGKKRPGILATDGTIRTGLYQREFAAFGIYAAAPRPAAQKQVMSLIYDDIKAGKAGDPE 177 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 + + + D VLACT Sbjct: 178 ---KFAAFTKDLVEQGCDCAVLACT 199 >gi|197335438|ref|YP_002156361.1| aspartate racemase [Vibrio fischeri MJ11] gi|197316928|gb|ACH66375.1| aspartate racemase [Vibrio fischeri MJ11] Length = 236 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 67/217 (30%), Gaps = 50/217 (23%) Query: 12 LQNSILIFDSGIGGL----IV---LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64 + + I +GG+ V L+ + P ++ D P + R Sbjct: 1 MNKKLGI----LGGMGPLATVEFMLK-IISQTPAHN-----DQEHIPMVVSSVPQIPDRT 50 Query: 65 MFLFS-------------DILDKYQPVLSVIACNTA-------FTLIKDELRSTFPSMAF 104 F+ + L++ VI CNTA ++ Sbjct: 51 AFIMGHGQDPYPELKHSFEQLEQSGAECIVIPCNTAHYWYPQLSATS---------NVHT 101 Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 + + ++ Q A + + +L+T AT++ ++ Y + V + Sbjct: 102 ISIIDSVVQEAQARRYKTVGLLATTATMKARMYQQKLNQYN--IDVIETDDTQQ-RDVMQ 158 Query: 165 YACGIKIKEDEIKKEI-EGCFIEKEGKRTDVIVLACT 200 +K E K + F + + ++L CT Sbjct: 159 GIYEVKAGNVEKGKALMLPVFKSMLAQGAEAVILGCT 195 >gi|49478746|ref|YP_038797.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49330302|gb|AAT60948.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 224 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 19/177 (10%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAA 116 A+KK ++ L+ + CNTA L +EL+ + S+ L V +K Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T+ +++L+T AT++ + I I + + + IK E E Sbjct: 114 NTK--RVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEE 167 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 +E+ + + D ++ACT ++ D++D+S +A+ + Sbjct: 168 ARELWSALVLQLKDEVDTAIIACTDLNVLASE---------DFIDSSQCLAKAVVRM 215 >gi|332799598|ref|YP_004461097.1| Asp/Glu/hydantoin racemase [Tepidanaerobacter sp. Re1] gi|332697333|gb|AEE91790.1| Asp/Glu/hydantoin racemase [Tepidanaerobacter sp. Re1] Length = 223 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 55/171 (32%), Gaps = 14/171 (8%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAA 115 L K+++ + D + + ++I CN+ I +R+T L P Sbjct: 56 PDTLTKKVLRIIQDF-ENHDIFRTMIYCNSLSAAIDIGYIRNT--QTRSLVITPLDIYRN 112 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACGIKIKED 174 + I++ + I +S + + +EE + I + Sbjct: 113 LAARYKKIALWAANGQCLSAIEHIFYEQ-NPSIDIIGISMLPIVKAIEEDQSAASIIDQY 171 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 ++ F ++L CTH P + + + +D ++ Sbjct: 172 DLVSLCVERFAPN------SLILGCTHLPYLQSELSKKI--SIPIIDPTEE 214 >gi|254173678|ref|ZP_04880350.1| aspartate racemase [Thermococcus sp. AM4] gi|214032370|gb|EEB73200.1| aspartate racemase [Thermococcus sp. AM4] Length = 234 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 64/196 (32%), Gaps = 23/196 (11%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVP 109 G L L+ + ++ CNTA I+ +R + + V Sbjct: 57 GPDPRPELIDSAKK-----LESWGADFIIMPCNTAHFFAETIQRAIR-----IPLVSMVE 106 Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 + + +L+T T++ + + + L R G+ Sbjct: 107 ETAERVKEMGLRKVGLLATDGTVKGLVYHRALLKRGISIAVPGKNDQRLVMR--GIYEGV 164 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIA 227 K E+ +E+ +K KR + I+ CT V L P V +D D IA Sbjct: 165 KAGNLELGRELLLKVAKKLEKRVEGIIAGCT------EVSVALRPEDLSVPLIDPMDVIA 218 Query: 228 RRARCLLPRINTHQTR 243 +A L + + R Sbjct: 219 EKAVKLALGLEELRAR 234 >gi|48243626|gb|AAT40775.1| putative aspartate racemase [Haemophilus influenzae] Length = 230 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 22/167 (13%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ +IACNTA DEL+ I + ++ I IL+T AT Sbjct: 71 LENAGAKCILIACNTA-HYWYDELKEKCHVDMLNIIDSTINEVLQMGKTK-IGILATDAT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK----IKEDEIKKEIEGCFIEK 187 L + Y + ++ E ++ K EI+K E I++ Sbjct: 129 LATKLYQKTLEKY-------GLICLLPNE--EHQKSVMESIYLYKSGEIQKAEELMLIQR 179 Query: 188 EG---KRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIARRA 230 + ++VI+L CT PL + + R+ P+ + D++ ++ R A Sbjct: 180 DELIRHGSEVIILGCTEIPLILKNAMRE---QPILYEDSTAALVRAA 223 >gi|229169488|ref|ZP_04297193.1| amino-acid racemase [Bacillus cereus AH621] gi|228613987|gb|EEK71107.1| amino-acid racemase [Bacillus cereus AH621] Length = 224 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 19/177 (10%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAA 116 A+KK ++ L+ + CNTA L +EL+ + ++ L V +K Sbjct: 57 EAMKKAIIEGAQK-LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPE 113 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T+ ++I++T AT++ + I I V + + + IK E E Sbjct: 114 NTK--RVAIIATEATVQAGIYQDGIAKRN----IEYVHNEQWQEMINQIISCIKGGEIEE 167 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 +++ + + D ++ACT + ++D++ +A+ + Sbjct: 168 ARKLWSVLVLQLKDEVDTAIIACT-------DLNVVVSED--FVDSAQCLAKAVVRM 215 >gi|227545204|ref|ZP_03975253.1| aspartate racemase [Lactobacillus reuteri CF48-3A] gi|300909118|ref|ZP_07126579.1| aspartate racemase [Lactobacillus reuteri SD2112] gi|227184813|gb|EEI64884.1| aspartate racemase [Lactobacillus reuteri CF48-3A] gi|300892983|gb|EFK86342.1| aspartate racemase [Lactobacillus reuteri SD2112] Length = 239 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 47/136 (34%), Gaps = 23/136 (16%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS-GLISILSTPATLR 133 P V+ CNTA D+L++ + L + + + + +L+T TL Sbjct: 76 NPAFFVLICNTA-HYSFDKLQAA-TEIPILNMLQETVNEIKKIKPDAKRVGLLATKGTLA 133 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIKEDEIKKEIEGCF 184 I + + + +A E+ K + ++K IE Sbjct: 134 ANLYDPYIEKAGYEL---IKPTPEIADMTEDLIYHDIKEAGHSDGKKYHELVRKMIEE-- 188 Query: 185 IEKEGKRTDVIVLACT 200 + DV+VL CT Sbjct: 189 -----QGADVVVLGCT 199 >gi|306479723|emb|CBV35969.1| glutamate racemase [Helicobacter pylori] Length = 84 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 8/82 (9%) Query: 192 TDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 +VI+L CTH+PLI P P + + D+I + F Sbjct: 3 PEVIILGCTHFPLIAQKIESYFMGHFSLPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAF 60 Query: 246 DDHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 61 PKVEFHASGDVIWLEKQAKEWL 82 >gi|11499017|ref|NP_070251.1| aspartate racemase [Archaeoglobus fulgidus DSM 4304] gi|2649148|gb|AAB89824.1| aspartate racemase [Archaeoglobus fulgidus DSM 4304] Length = 225 Score = 54.6 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 8/149 (5%) Query: 62 KRLMFLFSDI---LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 RL + DI L+ +I NT + + + + + +A Sbjct: 56 DRLGEILGDIAVKLENAGAKAVLICTNTMHKVA--DAVEKRIGIPLINIIDVTAEALKGD 113 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEI 176 +L T T+ + + + + + A S + + C I+E+ Sbjct: 114 GVKKAGLLGTKFTMEDGFYQERMKKHGIEVIVPEKEEDRNAIHSIIFDELCLGIIREES- 172 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 ++ + E + + + I+L CT PLI Sbjct: 173 ERRLRKIVDELKERGAEGIILGCTELPLI 201 >gi|293557294|ref|ZP_06675840.1| aspartate racemase [Enterococcus faecium E1039] gi|293568099|ref|ZP_06679436.1| aspartate racemase [Enterococcus faecium E1071] gi|294616494|ref|ZP_06696275.1| aspartate racemase [Enterococcus faecium E1636] gi|294617425|ref|ZP_06697059.1| aspartate racemase [Enterococcus faecium E1679] gi|291589181|gb|EFF20992.1| aspartate racemase [Enterococcus faecium E1071] gi|291590642|gb|EFF22370.1| aspartate racemase [Enterococcus faecium E1636] gi|291596331|gb|EFF27590.1| aspartate racemase [Enterococcus faecium E1679] gi|291600546|gb|EFF30852.1| aspartate racemase [Enterococcus faecium E1039] Length = 243 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 29/184 (15%) Query: 66 FLFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122 FL DI + QP V+ CNTA +EL++ + L A + +G Sbjct: 64 FLLDDIEKQNLLQPNFIVLTCNTA-HYFFEELQAA-TDIPILHMPREAANELVRQHTTGR 121 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++IL T +++ + + + ++ +L ++ + D + +E+ Sbjct: 122 VAILGTEGSMKAGIYEREVKNLGFE---TVIPDTVLQEKINYLIYHEIKESDYLNQELYY 178 Query: 183 CFIEK--EGKRTDVIVLACT------------HYP------LIVH-VFRQLSPWPVDWLD 221 +E+ E + ++L CT HYP ++ + LD Sbjct: 179 EILEEAVERLNCEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAERSKALD 238 Query: 222 NSDS 225 + Sbjct: 239 TASE 242 >gi|24378582|ref|NP_720537.1| putative amino acid recemase [Streptococcus mutans UA159] gi|24376434|gb|AAN57843.1|AE014857_7 putative amino acid recemase [Streptococcus mutans UA159] Length = 230 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 50/139 (35%), Gaps = 2/139 (1%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + L++ VI NT + +++ ++ L A +A Sbjct: 61 AEVLSQIAQKLEQAGADFIVICTNTMHKVA-PQIQKQI-AIPILHIAQATAEAILENGIQ 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T+ + + + + I + + +R+ + +D K+ Sbjct: 119 KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGITEVNRIIYDELCLGDIKDSSKQTYL 178 Query: 182 GCFIEKEGKRTDVIVLACT 200 + + +V++L CT Sbjct: 179 TIIDDLKKAGAEVVILGCT 197 >gi|302336070|ref|YP_003801277.1| aspartate racemase [Olsenella uli DSM 7084] gi|301319910|gb|ADK68397.1| aspartate racemase [Olsenella uli DSM 7084] Length = 247 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 56/178 (31%), Gaps = 24/178 (13%) Query: 68 FSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQ--AAAYTQSGL 122 + L IACNTA + I D + + + + + A G Sbjct: 69 VARWLQDAGADYLAIACNTAHYFYAAIDDAV-----DIPVVNIMEETSRHIAEKVGHGGR 123 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +++T T+R + +C H ++S + + + +I Sbjct: 124 VGLMATEGTVRSEVFQGYFKAMGLECVHPDEADQAQVSSLIYDGVKANADYDPGDLLDIA 183 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVF-RQLSPWPVD-----WLDNSDSIARRARCL 233 G G D +V CT L V + L D+ D +A R L Sbjct: 184 GRL---RGAGCDAVVCGCT--EL--SVIYQDLLDDKTQTVPCWLFDSLDILAERCVQL 234 >gi|306480324|emb|CBV36548.1| glutamate racemase [Helicobacter pylori] Length = 84 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 8/82 (9%) Query: 192 TDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 +VI+L CTH+PLI P P + + D+I + T F Sbjct: 3 PEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNTHAF 60 Query: 246 DDHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 61 PKVEFHASGDVIWLEKQAKEWL 82 >gi|239814554|ref|YP_002943464.1| aspartate racemase [Variovorax paradoxus S110] gi|239801131|gb|ACS18198.1| aspartate racemase [Variovorax paradoxus S110] Length = 245 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 25/141 (17%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L IACNTA L+ FP + L + + A +G +++++T T Sbjct: 83 LAALGSQAVAIACNTAHAW-HARLQERFPQVELLHMAREVARHLAAQGTGSVALMATEGT 141 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE------------YACGIKIKEDEIKKE 179 R + CH+ EE A +++ E + Sbjct: 142 YRVRLYEQALAEAGLDCHV---------PLAEERRIITRGIFDGVKAGNMQLAEACFSQV 192 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 E+ G I++ CT Sbjct: 193 ALR-LAERHGPV--TIIMGCT 210 >gi|306479990|emb|CBV36226.1| glutamate racemase [Helicobacter pylori] Length = 94 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 26/92 (28%), Gaps = 8/92 (8%) Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235 + +V++L CTH+PLI H + + D+I + Sbjct: 3 RYYFAPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--K 60 Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 F SG ++ + Sbjct: 61 YALKKNACAFPKVEFHASGDVIWLEKQAKEWL 92 >gi|206977308|ref|ZP_03238205.1| probable amino-acid racemase [Bacillus cereus H3081.97] gi|206744459|gb|EDZ55869.1| probable amino-acid racemase [Bacillus cereus H3081.97] Length = 224 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLQAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK + E Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQDMINQIITYIKSGKVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +E+ + + + D ++ACT Sbjct: 169 RELWNALVLQLREEVDTAIIACT 191 >gi|187478383|ref|YP_786407.1| aspartate racemase [Bordetella avium 197N] gi|115422969|emb|CAJ49499.1| aspartate racemase [Bordetella avium 197N] Length = 243 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 14/164 (8%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILS 127 +L+ + CNTA + E + L + A+ Q G I ++ Sbjct: 73 RMLNASGARAIAVPCNTA--HLWYEQMAAASDCEVLHIIEAVAQDLRRQGIHRGRIGLMG 130 Query: 128 TPATLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T ATL + + C + + ++ +AS A E+ +E C Sbjct: 131 TAATLSMGLYQQTLEKHGYTCIVPTEEEIDTLCMASI---RAVKANQLEESFAPAVE-CI 186 Query: 185 IEKEGKRTDVIVLACTHYPLIVH-VFRQLSPWPVDWLDNSDSIA 227 + D +VL CT PL V R+ P+ D+ D++A Sbjct: 187 QRLRTRGADAVVLGCTELPLAVPHALRKGLGIPLT--DSIDALA 228 >gi|229093861|ref|ZP_04224955.1| amino-acid racemase [Bacillus cereus Rock3-42] gi|228689540|gb|EEL43351.1| amino-acid racemase [Bacillus cereus Rock3-42] Length = 230 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 63 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 119 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK E E Sbjct: 120 TA-KRVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINQIISYIKGGEIEKA 174 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 E+ + + D ++ACT Sbjct: 175 HELWNTLVLQLRDEVDTAIIACT 197 >gi|292494120|ref|YP_003533263.1| aspartate racemase [Haloferax volcanii DS2] gi|291369140|gb|ADE01370.1| aspartate racemase [Haloferax volcanii DS2] Length = 245 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 44/169 (26%), Gaps = 16/169 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ V+A NT + S+ FL V A A + +L T AT Sbjct: 81 LEAGGADFVVMATNTMHRVAPRI--EAALSIPFLHIVDAAADAILADGLETVGVLGTRAT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + S R+ + + + + Sbjct: 139 MDGAFYRERFEEHGIDVIVPEESRRDEIDRIVFEELTKGEIREASRDYYLKAVDQLVERG 198 Query: 192 TDVIVLACTHYPLIVHVFRQLSP----WPVDWLDNSDSIARRARCLLPR 236 D IVL CT L V D A + R Sbjct: 199 ADGIVLGCT-------EIELLVEQADRPDVPLFDT---TALHVERAVER 237 >gi|229181072|ref|ZP_04308405.1| amino-acid racemase [Bacillus cereus 172560W] gi|228602400|gb|EEK59888.1| amino-acid racemase [Bacillus cereus 172560W] Length = 224 Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 +++L+T AT++ + I I + + + IK E E Sbjct: 114 NI-KRVALLATEATVQSRIYQDGITKRN----IEYIHHEKWQESINQIITCIKSGEIEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +E+ + + + D +++ACT Sbjct: 169 RELWNALVLQLREEVDTVIIACT 191 >gi|229062440|ref|ZP_04199756.1| amino-acid racemase [Bacillus cereus AH603] gi|228716911|gb|EEL68598.1| amino-acid racemase [Bacillus cereus AH603] Length = 224 Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 9/130 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + CNTA L +EL+ + ++ L V +K T++ +++L+T A Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPENTKT--VALLATEA 125 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I I V + + + IK E E +++ + + Sbjct: 126 TVQAGIYQDGIAKRN----IEYVHNEQWQEMINQIISCIKGGEIEEARKLWSLLVLQLKD 181 Query: 191 RTDVIVLACT 200 D ++ACT Sbjct: 182 EVDTAIIACT 191 >gi|227327191|ref|ZP_03831215.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 238 Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 8/162 (4%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 IL+ +I CNTA ++L+ + + + QA + + + +L+T Sbjct: 69 KILENAGAECIIIPCNTA-HYWFNDLKQQCRA-EMISIIDVTCQAIKHANTTRVGLLATT 126 Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT++ R Y NLI + + + Y G + ++ ++ Sbjct: 127 ATVKARIYQDNLITDNIDCYTPDDADQHQVMESIYAYKSGDIAGAYSLLSPVKDRLLQ-- 184 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + I+L CT PLI+ +++ P ++D ++ + ++ Sbjct: 185 -AGVEKIILGCTELPLILE--QEVRTSPQHYVDATEELIKKT 223 >gi|324328651|gb|ADY23911.1| aspartate racemase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 224 Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + S+ L V QA +++L+T AT Sbjct: 70 LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPKN-VKRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I I + + + IK E E +E+ + K + Sbjct: 127 VQAGIYQDGITKRD----IEYIHHETWQEMINQIITWIKSGEIEEARELWNALVLKLREE 182 Query: 192 TDVIVLACT 200 D ++ACT Sbjct: 183 VDTAIIACT 191 >gi|30022823|ref|NP_834454.1| aspartate racemase [Bacillus cereus ATCC 14579] gi|229130032|ref|ZP_04258996.1| amino-acid racemase [Bacillus cereus BDRD-Cer4] gi|29898382|gb|AAP11655.1| Aspartate racemase [Bacillus cereus ATCC 14579] gi|228653476|gb|EEL09350.1| amino-acid racemase [Bacillus cereus BDRD-Cer4] Length = 224 Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQDSL-SIPILHIVDETLQAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK E E Sbjct: 114 TA-KRVALLATEATVQADIYQDGIAKRN----IEYIHHETWQEMINQIITCIKSGEIEKA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 E+ + + + D ++ACT Sbjct: 169 HELWNALVLQLREEVDTAIIACT 191 >gi|293402558|ref|ZP_06646693.1| aspartate racemase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304072|gb|EFE45326.1| aspartate racemase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 231 Score = 53.8 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 57/155 (36%), Gaps = 12/155 (7%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L++ L +I CNT DE + + + + IL+T Sbjct: 70 HLLNQIGVKLILIPCNT-SHFFYDEFQ-KVSHAPIYHLIDHTTERLKKEGIKRVGILATD 127 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRV-EEYACGIKIKEDEIKKEIEGCFIEK 187 T++ S + I + S + ++ G I +D++ I+ E Sbjct: 128 GTIKSQLYQKSCESQQLEWVIPNQENQQHVMSLIYDDIKAGKPIHKDKLISIIK----EM 183 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 E ++ + ++LACT ++ R+ ++D Sbjct: 184 EEQQVERMILACTELSILKE--REQLDE--RFVDP 214 >gi|47565179|ref|ZP_00236222.1| aspartate racemase, putative [Bacillus cereus G9241] gi|47557965|gb|EAL16290.1| aspartate racemase, putative [Bacillus cereus G9241] Length = 224 Score = 53.8 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 57 EAMKKAIIEGAQK-LESTGVEFIAMPCNTA-HLYFEELQRSL-SVPILNIVDETLQAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + +++L+T AT++ + I I + + + IK E E Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHHETWQEMINQIITCIKSGEIEKA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 E+ + + D ++ACT Sbjct: 169 HELWNTLVLQLRDEVDTAIIACT 191 >gi|306479879|emb|CBV36120.1| glutamate racemase [Helicobacter pylori] Length = 100 Score = 53.8 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 27/98 (27%), Gaps = 8/98 (8%) Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARR 229 I + + +V++L CTH+PLI + + D+I Sbjct: 3 IVRTCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEY 62 Query: 230 ARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + F SG ++ + Sbjct: 63 LQQ--KYALKKNACAFPKVEFHASGDVIWLEKQAKEWL 98 >gi|167622930|ref|YP_001673224.1| aspartate racemase [Shewanella halifaxensis HAW-EB4] gi|167352952|gb|ABZ75565.1| aspartate racemase [Shewanella halifaxensis HAW-EB4] Length = 230 Score = 53.8 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 48/163 (29%), Gaps = 13/163 (7%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + + +I NT + DE+++ S+ L A + Sbjct: 63 ILSAAAKNVAAGGADFLLICTNTMHKVA-DEIQAQL-SIPILHIADATAAKLLANGVTKV 120 Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T+ + + LI+ + + + + V + K++ Sbjct: 121 GLLGTRFTMEQDFYKSRLINQFGIDVIVPNEAERNVVHHVIYDELCRGVINPASKQQYLD 180 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222 + + ++L CT L V D Sbjct: 181 IVNDLHAQGAQAVILGCT-------EIALLIGQQDTQVPLYDT 216 >gi|325283629|ref|YP_004256170.1| Asp/Glu/hydantoin racemase [Deinococcus proteolyticus MRP] gi|324315438|gb|ADY26553.1| Asp/Glu/hydantoin racemase [Deinococcus proteolyticus MRP] Length = 224 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 10/115 (8%) Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +++ A+ L+H+ + + + + LA VE+ + E+ Sbjct: 114 GVMAANASGHAGIERTLLHA-NPELRLIQFAQLDLADAVEQGRSPQDTVQAFHLAELTSL 172 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW--PVDWLDNSDSIARRARCLLPR 236 + I+L CTH+P F PV LD + + ++ L Sbjct: 173 LSRL---GAEAIILGCTHFP----AFGAALAPLSPVPLLDPAGEMWQQLAAQLEH 220 >gi|50120232|ref|YP_049399.1| putative aspartate/glutamate racemase [Pectobacterium atrosepticum SCRI1043] gi|49610758|emb|CAG74203.1| putative aspartate/glutamate racemase [Pectobacterium atrosepticum SCRI1043] Length = 236 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 15/162 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + VI NT + + R++ + L A + + +L T T Sbjct: 73 LRQAGADAIVICTNTMHKVADEVERAS--QLPLLHIADATGASLKQHGLKKVGLLGTRYT 130 Query: 132 LRRTYTSNLI-HSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEK 187 + + + I + + + L +R+ E I ++ +EI ++ Sbjct: 131 MEQDFYRQRIQERFSVDVIVPDQTGKELVNRIIYDELCLGNINDTSRQVYREIIQQLEQQ 190 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD--SIA 227 + +L CT PL++ V D S +IA Sbjct: 191 GAEGI---ILGCTEIPLLIG----AGDATVPLFDTSYLHAIA 225 >gi|229135597|ref|ZP_04264377.1| amino-acid racemase [Bacillus cereus BDRD-ST196] gi|228647870|gb|EEL03925.1| amino-acid racemase [Bacillus cereus BDRD-ST196] Length = 217 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 9/130 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + CNTA L +EL+ + ++ L V +K T+ +++L+T A Sbjct: 63 LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPENTK--RVALLATEA 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + + I I + + + + IK E E +++ + + Sbjct: 119 TVQASIYQDGITKRD----IEYIHNEQWQEMINQIITCIKGGEIEEARKLWSLLVLQLKD 174 Query: 191 RTDVIVLACT 200 D ++ACT Sbjct: 175 EIDTAIIACT 184 >gi|171321276|ref|ZP_02910240.1| aspartate racemase [Burkholderia ambifaria MEX-5] gi|171093448|gb|EDT38627.1| aspartate racemase [Burkholderia ambifaria MEX-5] Length = 233 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 10/169 (5%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L++ + I CNTA LR ++ L V A A +++L+T Sbjct: 69 LLNRCGVDVIAIPCNTA-HHWYAPLRER-SAVPILHIVDASVAALPA-GLRRVAVLATGG 125 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSS-MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 TL + + + + V++ + + + G + + Sbjct: 126 TLVSGLYQAALRARGFEPVMPGVAAQRDIVACIAAVKAGKIDAS---ARCLTRALATLAR 182 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 + V V+ CT P+ R P +D++ +AR Sbjct: 183 RDVGVAVMGCTEIPIAARALRDA---PFALIDSTQELARATVAYAAERG 228 >gi|116514821|ref|YP_813727.1| aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116094136|gb|ABJ59289.1| Aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 249 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127 K P V+ CNTA D+L + + FL ++ A + S I +++ Sbjct: 73 AKLGPDFMVMPCNTA-HYFYDDL-AALTDIPFLHM---MRIAVHQYVDQFPNSPKIGLIA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T ++ + IH + + + V E ++ + KE+ + K Sbjct: 128 TEGSIYDHLYEDEIHRVGREVE---FGGLEIQPMVTELIYRDIKEKGIVDKELYHEILRK 184 Query: 188 --EGKRTDVIVLACT 200 + DVI+L CT Sbjct: 185 MHDEYGCDVILLGCT 199 >gi|75763381|ref|ZP_00743116.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489131|gb|EAO52612.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 235 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT Sbjct: 81 LESTGVSFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPEN-TKRVALLATEAT 137 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I I + + + IK E E +E+ + + Sbjct: 138 VQARIYQDGIAKRN----IEYIHHEKWQESINQIITCIKSGEIEEARELWNTLVLQLRDE 193 Query: 192 TDVIVLACT 200 D ++ACT Sbjct: 194 IDTAIIACT 202 >gi|217962242|ref|YP_002340812.1| probable amino-acid racemase [Bacillus cereus AH187] gi|229141490|ref|ZP_04270026.1| amino-acid racemase [Bacillus cereus BDRD-ST26] gi|217067288|gb|ACJ81538.1| probable amino-acid racemase [Bacillus cereus AH187] gi|228641975|gb|EEK98270.1| amino-acid racemase [Bacillus cereus BDRD-ST26] Length = 224 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK + E Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQDMINQIITYIKSGKVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +E+ + + + D ++ACT Sbjct: 169 RELWNALVLQLREEVDTAIIACT 191 >gi|229124324|ref|ZP_04253514.1| amino-acid racemase [Bacillus cereus 95/8201] gi|228659147|gb|EEL14797.1| amino-acid racemase [Bacillus cereus 95/8201] Length = 224 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 69/176 (39%), Gaps = 17/176 (9%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L DEL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFDELQQSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I + + + + IK E E Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRNIEYTHYEQ----WQESINQIITYIKSGEVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 +E+ + + D ++ACT ++ D++D++ +A+ + Sbjct: 169 RELWSALVLQLKDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVRM 215 >gi|229198914|ref|ZP_04325604.1| amino-acid racemase [Bacillus cereus m1293] gi|228584551|gb|EEK42679.1| amino-acid racemase [Bacillus cereus m1293] Length = 224 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK + E Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQDMINQIITYIKSGKVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +E+ + + + D ++ACT Sbjct: 169 RELWNALVLQLREEVDTAIIACT 191 >gi|126649551|ref|ZP_01721792.1| aspartate racemase [Bacillus sp. B14905] gi|126593876|gb|EAZ87799.1| aspartate racemase [Bacillus sp. B14905] Length = 233 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 46/137 (33%), Gaps = 20/137 (14%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + I CNTA T DE++ P + L + K+A+ + IL+T Sbjct: 73 LASVGADMIAIPCNTAHTF-YDEIQEGSP-IPVLHMIRETAKRASELGAE-RVGILATTG 129 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-------EIEGC 183 TL + + Y + E A + I D +K + + Sbjct: 130 TLTSRMYQDALEEY---------GITPVVPDNEMRAHVMTIIYDYVKAGKNVTQDDWQPI 180 Query: 184 FIEKEGKRTDVIVLACT 200 D +VL CT Sbjct: 181 EDAMLALNCDRLVLGCT 197 >gi|253582499|ref|ZP_04859721.1| aspartate racemase [Fusobacterium varium ATCC 27725] gi|251835644|gb|EES64183.1| aspartate racemase [Fusobacterium varium ATCC 27725] Length = 230 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 11/149 (7%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + L + + L+K VI NT + +++ S+ L A Sbjct: 58 DKSAEILTE-----AAQNLEKAGADFIVICTNTMHKIA-PDIQEKI-SIPILHIAEATAD 110 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKI 171 +++L T T+ + + N + + + +RV EE G + Sbjct: 111 ELDKKNIKKVALLGTKYTMEQDFYKNKLVDRGIEVIVPDAEDRAEVNRVIYEELCLGNIV 170 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + KK + ++L CT Sbjct: 171 ADS--KKRFLDIMKSLVKEGAQGVILGCT 197 >gi|170703014|ref|ZP_02893844.1| aspartate racemase [Burkholderia ambifaria IOP40-10] gi|170132072|gb|EDT00570.1| aspartate racemase [Burkholderia ambifaria IOP40-10] Length = 233 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 8/168 (4%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L++ + I CN+A LR + L V A A +++L+T Sbjct: 69 LLNRCGVDVIAIPCNSA-HHWYAPLRER-SAAPVLHIVDASVAAVPA-GVRRVAVLATGG 125 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL + + + + + V++ + KI + + + Sbjct: 126 TLVSGFYQAALRARGFEPVMPAVAAQRDIAACIAAVKAGKIDASV--RRLSRALATLARR 183 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 V V+ CT PL V R P +D++ +AR Sbjct: 184 DVGVAVMGCTEIPLAARVLRDA---PFALIDSTQELARATVAYAAERG 228 >gi|269138277|ref|YP_003294977.1| putative aspartate racemase [Edwardsiella tarda EIB202] gi|267983937|gb|ACY83766.1| putative aspartate racemase [Edwardsiella tarda EIB202] gi|304558313|gb|ADM40977.1| Putative aspartate racemase [Edwardsiella tarda FL6-60] Length = 239 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ VI CNTA DELR + + L V A + I +L+T AT Sbjct: 71 LEQAGAECIVIPCNTA-HFWFDELRQSC-HVELLNIVEATLNEVCASGQHHIGLLATNAT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L I ++ +C +E + ++ +E + Sbjct: 129 LYMGLYQQAIEAHGLRCIAPDREGQEQV--MESIYALKAGDAEHARRLMERQADALFARG 186 Query: 192 TDVIVLACT 200 +IVL CT Sbjct: 187 AQIIVLGCT 195 >gi|253687770|ref|YP_003016960.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754348|gb|ACT12424.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 238 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 61/161 (37%), Gaps = 6/161 (3%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 IL+ +I CNTA +EL+ + + + QA + + + +L+T Sbjct: 69 KILENAGAECIIIPCNTA-HYWFNELKQQCRA-EMISIIDVTCQAIKHANTTRVGLLATT 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT++ + + + +C + +E + + Sbjct: 127 ATVKARIYQDNLITDNIECFTPNDADQHQV--MESIYAYKSGDIAGAYRMLSPVKDRLLH 184 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + I+L CT PLI+ +++ P ++D ++ + ++ Sbjct: 185 AGVEKIILGCTELPLILE--QEVKTSPQHYVDATEELIKKT 223 >gi|218899907|ref|YP_002448318.1| probable amino-acid racemase [Bacillus cereus G9842] gi|218545086|gb|ACK97480.1| probable amino-acid racemase [Bacillus cereus G9842] Length = 224 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT Sbjct: 70 LESTGVSFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPEN-TKRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I I + + + IK E E +E+ + + Sbjct: 127 VQARIYQDGIAKRN----IEYIHHEKWQESINQIITCIKSGEIEEARELWNTLVLQLRDE 182 Query: 192 TDVIVLACT 200 D ++ACT Sbjct: 183 IDTAIIACT 191 >gi|228903273|ref|ZP_04067405.1| amino-acid racemase [Bacillus thuringiensis IBL 4222] gi|228856374|gb|EEN00902.1| amino-acid racemase [Bacillus thuringiensis IBL 4222] Length = 224 Score = 53.4 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT Sbjct: 70 LESTGVSFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPEN-TKRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I I + + + IK E E +E+ + + Sbjct: 127 VQARIYQDGIAKRN----IEYIHHEKWQESINQIITCIKSGEIEEARELWNTLVLQLRDE 182 Query: 192 TDVIVLACT 200 D ++ACT Sbjct: 183 IDTAIIACT 191 >gi|225574246|ref|ZP_03782856.1| hypothetical protein RUMHYD_02310 [Blautia hydrogenotrophica DSM 10507] gi|225038536|gb|EEG48782.1| hypothetical protein RUMHYD_02310 [Blautia hydrogenotrophica DSM 10507] Length = 236 Score = 53.4 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 5/130 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + ++ CNTA K L F + FL + AA +L+T T Sbjct: 71 LEGMGADVLIMPCNTAHYFYKKLLP--FVDIPFLNMLEETADAAVKMGITKAGLLATDGT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 ++ + + + D K+ E + + Sbjct: 129 VKSGVYEKAFQERGISLELPAKEEQESVMELIYDGVKAGNYSLD--TKKFERAMDKLLQR 186 Query: 191 RTDVIVLACT 200 V+VL CT Sbjct: 187 GAQVLVLGCT 196 >gi|229013961|ref|ZP_04171086.1| amino-acid racemase [Bacillus mycoides DSM 2048] gi|228747334|gb|EEL97212.1| amino-acid racemase [Bacillus mycoides DSM 2048] Length = 224 Score = 53.4 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 63/162 (38%), Gaps = 16/162 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + ++ L V +A + +++L+T AT Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPEN-TKRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + I I + + + + IK E E +++ + + Sbjct: 127 VQASIYQDGITKRD----IEYIHNEQWQEMINQIITCIKGGEIEEARKLWSLLVLQLKDE 182 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 D ++ACT + ++D++ +A+ + Sbjct: 183 VDTAIIACT-------DLNVVVSED--FVDSAQCLAKAVVRI 215 >gi|269836715|ref|YP_003318943.1| aspartate racemase [Sphaerobacter thermophilus DSM 20745] gi|269785978|gb|ACZ38121.1| aspartate racemase [Sphaerobacter thermophilus DSM 20745] Length = 247 Score = 53.4 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 13/165 (7%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP--AIKQAAAYTQSGLISILSTP 129 L+ VI CNTA +R ++ + + A + AA + IL+T Sbjct: 73 LEGAGASFIVIPCNTAHAF-LGAVRDAV-AIPIISMIDETAAEVAALLPRGAAAGILATS 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ + + + + + + + +K + + E Sbjct: 131 GTVSAGLYQDALAAAGLRALVPSPDAQAQVMAAIAAVKAGDLSRATTEKALVAAY-ELIE 189 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIARRARC 232 + ++ ACT PLI+ P V +D + +AR A Sbjct: 190 QGAGALLAACTELPLILQ------PNDIPVPLIDPTAVLARAAVR 228 >gi|196041448|ref|ZP_03108741.1| probable amino-acid racemase [Bacillus cereus NVH0597-99] gi|196027696|gb|EDX66310.1| probable amino-acid racemase [Bacillus cereus NVH0597-99] Length = 224 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK E E Sbjct: 114 TA-KRVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINQIISYIKGGEIEKA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D ++ACT Sbjct: 169 RKLWNALVLQLRDEVDTAIIACT 191 >gi|317053843|ref|YP_004117868.1| aspartate racemase [Pantoea sp. At-9b] gi|316951838|gb|ADU71312.1| aspartate racemase [Pantoea sp. At-9b] Length = 230 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 42/130 (32%), Gaps = 3/130 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ V+ NT L + ++ L A + +L+T T Sbjct: 71 LERGGADFIVLCTNTMHKLAAQITAAV--NIPLLHIADATAARIRQAGVKRVGLLATGFT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + L Y + + + + + + I +E + + + Sbjct: 129 MEQDFYKGRLQQEYGIEVLVPAATQRKVVHDIIYQELCLGIIREESRAHYREIIAQLVAE 188 Query: 191 RTDVIVLACT 200 + I+L CT Sbjct: 189 GAEAIILGCT 198 >gi|306480447|emb|CBV36666.1| glutamate racemase [Helicobacter pylori] Length = 93 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 28/93 (30%), Gaps = 10/93 (10%) Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRA-RCLL 234 + +VI+L CTH+PLI + + D+I + Sbjct: 2 RYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHSGDAIVEYLQKNYA 61 Query: 235 PRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + N H F SG ++ + Sbjct: 62 LKKNAHA---FPKVEFHASGDVIWLEKQAKEWL 91 >gi|163942483|ref|YP_001647367.1| aspartate racemase [Bacillus weihenstephanensis KBAB4] gi|163864680|gb|ABY45739.1| aspartate racemase [Bacillus weihenstephanensis KBAB4] Length = 224 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 63/162 (38%), Gaps = 16/162 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + ++ L V +A + +++L+T AT Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPEN-TKRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + + I I + + + + IK E E +++ + + Sbjct: 127 VQASIYQDGITKRD----IEYIHNEQWQEMINQIITCIKGGEIEEARKLWSLLVLQLKDE 182 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 D ++ACT + ++D++ +A+ + Sbjct: 183 VDTAIIACT-------DLNVVVSED--FVDSAQCLAKAVVRI 215 >gi|229072257|ref|ZP_04205463.1| amino-acid racemase [Bacillus cereus F65185] gi|229082009|ref|ZP_04214498.1| amino-acid racemase [Bacillus cereus Rock4-2] gi|228701308|gb|EEL53805.1| amino-acid racemase [Bacillus cereus Rock4-2] gi|228710865|gb|EEL62834.1| amino-acid racemase [Bacillus cereus F65185] Length = 224 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T + +++L+T AT++ + I I + + + + IK E E Sbjct: 114 T-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D ++ACT Sbjct: 169 RKLWNALVVQLKDEVDTAIIACT 191 >gi|228967857|ref|ZP_04128869.1| amino-acid racemase [Bacillus thuringiensis serovar sotto str. T04001] gi|228791823|gb|EEM39413.1| amino-acid racemase [Bacillus thuringiensis serovar sotto str. T04001] Length = 224 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 7/129 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT Sbjct: 70 LESTGVSFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPEN-TKRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I I + + + K E E +E+ + + Sbjct: 127 VQARIYQDGIAKRN----IEYIHHEKWQESINQIITCSKSGEIEEARELWNTLVLQLRDE 182 Query: 192 TDVIVLACT 200 D ++ACT Sbjct: 183 IDTAIIACT 191 >gi|169825878|ref|YP_001696036.1| aspartate racemase [Lysinibacillus sphaericus C3-41] gi|168990366|gb|ACA37906.1| Aspartate racemase [Lysinibacillus sphaericus C3-41] Length = 233 Score = 52.6 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 45/135 (33%), Gaps = 16/135 (11%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + I CNTA T DE+++ P + L + K+A+ + IL+T Sbjct: 73 LASVGADMIAIPCNTAHTF-YDEIQAGSP-IPVLHMIRETAKRASELGAE-RVGILATTG 129 Query: 131 TLRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 TL + Y V + I+ V+ + I+ Sbjct: 130 TLTSRMYQEALEEYGITPVVPDNEMRAHVMTIIYDFVKAGKDVTQDDWQPIEDA------ 183 Query: 186 EKEGKRTDVIVLACT 200 D IVL CT Sbjct: 184 -MLALNCDRIVLGCT 197 >gi|227115199|ref|ZP_03828855.1| aspartate racemase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 238 Score = 52.6 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 58/161 (36%), Gaps = 6/161 (3%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 IL+ +I CNTA ++L+ + + + QA + + +L+T Sbjct: 69 KILENAGAECIIIPCNTA-HYWFNDLKKQCRA-EMISIIDVTCQAIKNANTTRVGLLATT 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT++ + + + + +E D + Sbjct: 127 ATVKARIYQDNLTT--DNIECYTPDDADQHQVMESIYAYKSGDIDRAYSLLSPVKDRLLQ 184 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + I+L CT PLI+ +++ P ++D ++ + ++ Sbjct: 185 AGVEKIILGCTELPLILE--QEVKTSPQHYVDATEELIKKT 223 >gi|158319598|ref|YP_001512105.1| aspartate racemase [Alkaliphilus oremlandii OhILAs] gi|158139797|gb|ABW18109.1| aspartate racemase [Alkaliphilus oremlandii OhILAs] Length = 234 Score = 52.6 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 23/171 (13%) Query: 35 LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA---FTLI 91 +P+ V D G+ L K L+ ++ CNTA + I Sbjct: 45 AIPDRTAYLVGD------GDNPLEELVKSAKR-----LENMGADFLIMPCNTAHYFYQEI 93 Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ-CHI 150 KD + F +M V IK+ Y S + +L+T T++ + + ++ Sbjct: 94 KDVINIAFLNM-IEETVMHIKE--KYPTSKKVGLLATDGTVQSKIYDLYFNKENIEMINL 150 Query: 151 HLVSSMILASRVEEYACG-IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 S + + + G +I ++I I+ E +GK DV++L CT Sbjct: 151 DENSQKSIMNIIYSVKAGKNQIPLEDIYSAID----ELKGKGADVVILGCT 197 >gi|57640439|ref|YP_182917.1| aspartate racemase [Thermococcus kodakarensis KOD1] gi|57158763|dbj|BAD84693.1| aspartate racemase [Thermococcus kodakarensis KOD1] Length = 232 Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 19/184 (10%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G L L+ + ++ CNTA E ++ + + Sbjct: 58 GPDPRPELIASAKK-----LESWGADFIIMPCNTA--HFFAETIQRAINIPLVSMIEETA 110 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 + + +L+T T++ + + L + G+K Sbjct: 111 KKIESMGLRKVGLLATDGTIKGMVYHRALLKRGIHIAVPNKKDQGLVMKA--IYEGVKAG 168 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSDSIARR 229 E+ +E+ +K +R++ I+ CT + V +D D IA R Sbjct: 169 NLELGRELLLKVAKKLERRSEGIIAGCT-------EVSVVLKSEDLNVPLIDPMDVIAER 221 Query: 230 ARCL 233 A L Sbjct: 222 AVKL 225 >gi|307700261|ref|ZP_07637301.1| aspartate racemase [Mobiluncus mulieris FB024-16] gi|307614472|gb|EFN93701.1| aspartate racemase [Mobiluncus mulieris FB024-16] Length = 237 Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 13/135 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-----GLISIL 126 L VI CNTA + L++ ++ + A + ++I+ Sbjct: 71 LQDAGAEFLVIPCNTAT----NFLQAVVEAVDIEVVNIVAETVAEIGRKNAGGIKRVAIM 126 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFI 185 +T T+ + + LV S+ L + G + +E+ G Sbjct: 127 ATEGTIASEIYQETLQLAGYEA---LVPSVQLQKEISGIIYGYVKAGQPVSRELFFGIIN 183 Query: 186 EKEGKRTDVIVLACT 200 + D ++ CT Sbjct: 184 KLRQNEADAVICGCT 198 >gi|228961020|ref|ZP_04122648.1| amino-acid racemase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798653|gb|EEM45638.1| amino-acid racemase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 224 Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 7/129 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT Sbjct: 70 LESTGVSFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPEN-TKRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I I + + + + IK E E +++ + + Sbjct: 127 VQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEKARKLWSALVGQLKDE 182 Query: 192 TDVIVLACT 200 D ++ACT Sbjct: 183 VDTAIIACT 191 >gi|226314088|ref|YP_002773984.1| hypothetical protein BBR47_45030 [Brevibacillus brevis NBRC 100599] gi|226097038|dbj|BAH45480.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 230 Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 5/138 (3%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 M L + L+ L V+ NT S+ FL A QA ++ Sbjct: 64 MALAAKSLEAAGADLIVLCTNTM--HKLAYAIEEATSLPFLHIADATAQAITNHGHKRVA 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIEG 182 +L+T T+ + + + + V + L L + + I +E K+ + Sbjct: 122 LLATRFTMEQDFYTGRLRD-VHGLEVLLPDEQERTLVHEIIYNELCVGIIREESKRNYQA 180 Query: 183 CFIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 181 IIERLVKEGAEAVILGCT 198 >gi|197117610|ref|YP_002138037.1| aspartate/glutamate racemase superfamily protein [Geobacter bemidjiensis Bem] gi|197086970|gb|ACH38241.1| aspartate/glutamate racemase superfamily protein [Geobacter bemidjiensis Bem] Length = 233 Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 15/155 (9%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 L+ L K + I+ NT ++ DE+++ P + + V A + A Sbjct: 61 YLLTAKVKALQKAGADFAFISANTP-HVVFDEVQAKSP-IPLISIVTATLEKAKELGVKR 118 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS------MILASRVEEYACGIKIKEDEI 176 + +L T T+ + + S + + L + +E + ++ + Sbjct: 119 VGLLGTKFTMEENFFA-APFSAAGISVVIPQPADQQYIQEKLMTEIELGVFKDETRDGLL 177 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYP--LIVHVF 209 KE + D ++L CT P L+ F Sbjct: 178 AVIGR----MKEQEHIDAVILGCTELPLILLKDEF 208 >gi|188585267|ref|YP_001916812.1| aspartate racemase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349954|gb|ACB84224.1| aspartate racemase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 244 Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 11/139 (7%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-----KQAAAYTQSGL 122 + L+ V+ CNTA +++ ++ F+ + K ++ G Sbjct: 68 MAKRLENMGADFLVMPCNTA-HYFYKDIQDVV-NIPFVNMLECTARYINKLIGNDSKQGK 125 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIE 181 + +L+T TL+ N + + + I L + G ++ +E Sbjct: 126 VGLLATSGTLQTEIYQNQLSQFGFEV-ITPEPYQQLVMEAIYAVKAGDIGTS--TRELLE 182 Query: 182 GCFIEKEGKRTDVIVLACT 200 + E I++ CT Sbjct: 183 KPIKQLENNGAKAIIMGCT 201 >gi|261821065|ref|YP_003259171.1| aspartate racemase [Pectobacterium wasabiae WPP163] gi|261605078|gb|ACX87564.1| aspartate racemase [Pectobacterium wasabiae WPP163] Length = 238 Score = 52.3 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 7/143 (4%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 IL+ +I CNTA +EL+ + + + QA + + +L+T Sbjct: 69 KILENAGAECIIIPCNTA-HYWFNELKQQCRA-EMISIIDVTCQAIRSANTTRVGLLATT 126 Query: 130 ATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 AT+ R Y NLI+ + + + Y G + ++ ++ Sbjct: 127 ATVTARIYQDNLINDNIECYTPDEADQHQVMESIYAYKSGNIAGAYSMLSPVKDRLLQ-- 184 Query: 189 GKRTDVIVLACTHYPL-IVHVFR 210 + I+L CT PL + + Sbjct: 185 -AGVEKIILGCTELPLILEQEIK 206 >gi|228929809|ref|ZP_04092825.1| amino-acid racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228829866|gb|EEM75487.1| amino-acid racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 224 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 69/176 (39%), Gaps = 17/176 (9%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK E E Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 +E+ + + D ++ACT ++ D++D++ +A+ + Sbjct: 169 RELWSALVLQLKDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVRM 215 >gi|42783941|ref|NP_981188.1| aspartate racemase family protein [Bacillus cereus ATCC 10987] gi|42739871|gb|AAS43796.1| aspartate racemase family protein [Bacillus cereus ATCC 10987] Length = 225 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 7/129 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + S+ L V Q +++L+T AT Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQIIPKN-VKRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I I + + + IK E E +E+ + + + Sbjct: 127 VQAGIYQDGITKRD----IEYIHHETWQEMINQIITYIKYGEVEEARELWNALVLQLREE 182 Query: 192 TDVIVLACT 200 D ++ACT Sbjct: 183 VDTAIIACT 191 >gi|296505218|ref|YP_003666918.1| aspartate racemase [Bacillus thuringiensis BMB171] gi|296326270|gb|ADH09198.1| aspartate racemase [Bacillus thuringiensis BMB171] Length = 224 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQAIPK 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 +++L+T AT++ + I I + + + + IK E E Sbjct: 114 N-VKRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEKA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D +++ACT Sbjct: 169 RKLWSALVVQLKDEVDTVIIACT 191 >gi|254386116|ref|ZP_05001429.1| aspartate racemase [Streptomyces sp. Mg1] gi|194344974|gb|EDX25940.1| aspartate racemase [Streptomyces sp. Mg1] Length = 238 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 2/123 (1%) Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 L +I NT + D++++ S+ L A A + + +L T T+ + + Sbjct: 68 DLVLICTNTMHKVA-DQVQAGI-SVPLLHLADATADAVKAAGARRVGLLGTAFTMEQDFY 125 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + + + L RV I +E + + + I+L Sbjct: 126 RGRLAAAGLDVRVPDAAGRALVHRVIYEELCQGIVREESRAAYRHVIGQLVADGAEGIIL 185 Query: 198 ACT 200 CT Sbjct: 186 GCT 188 >gi|306480112|emb|CBV36344.1| glutamate racemase [Helicobacter pylori] Length = 93 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 22/80 (27%), Gaps = 8/80 (10%) Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235 + +V++L CTH+PLI + + D+I + Sbjct: 2 RYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMDHFALSTPPLLIHSGDAIVEYLQQ--K 59 Query: 236 RINTHQTRVFDDHALFLSGK 255 F SG Sbjct: 60 YALKKNACAFPKVEFHASGD 79 >gi|199597926|ref|ZP_03211351.1| Aspartate racemase [Lactobacillus rhamnosus HN001] gi|258507253|ref|YP_003170004.1| aspartate racemase [Lactobacillus rhamnosus GG] gi|199591183|gb|EDY99264.1| Aspartate racemase [Lactobacillus rhamnosus HN001] gi|257147180|emb|CAR86153.1| Aspartate racemase [Lactobacillus rhamnosus GG] gi|259648619|dbj|BAI40781.1| aspartate racemase [Lactobacillus rhamnosus GG] Length = 250 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 7/128 (5%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPATLRR 134 QP VI CNTA D+L + AI+ + I +++T T++ Sbjct: 76 QPEFIVIVCNTA-HYFYDQLAAASSVPLLHMPRLAIRDMCERFPNEERIGLIATQGTIKD 134 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EGKRT 192 S+ I + + + L V E ++ E+ E+ +++ + + Sbjct: 135 GIYSHEIE--NTGRKVI-LGDQALQDMVTELIYKYVKEKGEVNAELYHRILKRMHDDFQV 191 Query: 193 DVIVLACT 200 +VIVL CT Sbjct: 192 NVIVLGCT 199 >gi|229550848|ref|ZP_04439573.1| aspartate racemase [Lactobacillus rhamnosus LMS2-1] gi|258538440|ref|YP_003172939.1| aspartate racemase [Lactobacillus rhamnosus Lc 705] gi|229315798|gb|EEN81771.1| aspartate racemase [Lactobacillus rhamnosus LMS2-1] gi|257150116|emb|CAR89088.1| Aspartate racemase [Lactobacillus rhamnosus Lc 705] Length = 250 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 7/128 (5%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPATLRR 134 QP VI CNTA D+L + AI+ + I +++T T++ Sbjct: 76 QPEFIVIVCNTA-HYFYDQLAAASSVPLLHMPRLAIRDMCERFPNEERIGLIATQGTIKD 134 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EGKRT 192 S+ I + + + L V E ++ E+ E+ +++ + + Sbjct: 135 GIYSHEIE--NTGRKVI-LGDQALQDMVTELIYKYVKEKGEVNAELYHRILKRMHDDFQV 191 Query: 193 DVIVLACT 200 +VIVL CT Sbjct: 192 NVIVLGCT 199 >gi|162404920|gb|ABX88891.1| glutamate racemase [Edwardsiella ictaluri 93-146] Length = 74 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SGKPDIAMRRL 263 + Q+ P +D+ +IARR L+ T + + A A+ + Sbjct: 1 LRDELAQVLPAGTRLVDSGAAIARRVAWLIANQATLPGKDMRNVAYATQCDAQTAALLPV 60 Query: 264 MQGFGLKS 271 ++ G ++ Sbjct: 61 LRQLGFET 68 >gi|306480080|emb|CBV36313.1| glutamate racemase [Helicobacter pylori] Length = 82 Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 8/82 (9%) Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245 +V++L CTH+PLI + + D+I + F Sbjct: 1 IEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 58 Query: 246 DDHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 PKVEFHASGDVVWLEKQAKEWL 80 >gi|301056262|ref|YP_003794473.1| aspartate racemase [Bacillus anthracis CI] gi|300378431|gb|ADK07335.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI] Length = 224 Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK E E Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +E+ + + D ++ACT Sbjct: 169 RELWSALVLQLKDEVDTAIIACT 191 >gi|297585520|ref|YP_003701300.1| aspartate racemase [Bacillus selenitireducens MLS10] gi|297143977|gb|ADI00735.1| aspartate racemase [Bacillus selenitireducens MLS10] Length = 232 Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 2/137 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K V+A NT + D++ S S+ FL + + + +L T T Sbjct: 71 LEKAGAEAIVLATNTMHAVA-DDIASGL-SIPFLHIGDVAAKKISSQGLKTVGLLGTSFT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + +++ Q I I + + + E K Sbjct: 129 MEQPFYHERLNANGIQTLIPSEEDRIFIHDAIFTELCMGVFKHETKARFLAIMDRLRQDG 188 Query: 192 TDVIVLACTHYPLIVHV 208 + IVL CT PL++ Sbjct: 189 AEGIVLGCTEIPLLIKE 205 >gi|88802581|ref|ZP_01118108.1| aspartate racemase [Polaribacter irgensii 23-P] gi|88781439|gb|EAR12617.1| aspartate racemase [Polaribacter irgensii 23-P] Length = 243 Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 7/148 (4%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 + + IL+K V+A NT L+ D+L + K A + + + Sbjct: 75 FLKIKIQILEKSNVDYVVLASNTP-HLVFDKLAESVNVKMISIVEETCK-AISKSGIKKV 132 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE--DEIKKEIE 181 +L T +T+ + + + + I + + E+Y + E E KKE+ Sbjct: 133 GLLGTKSTMSKGFYQKV--GENNGIKIVIPNDENQNYIHEKYMDELVFNEIIPETKKELI 190 Query: 182 GCFIEKE-GKRTDVIVLACTHYPLIVHV 208 E E + + IVL T PLI+ Sbjct: 191 RIINELEVNENIEGIVLGGTELPLILKQ 218 >gi|212223950|ref|YP_002307186.1| hypothetical aspartate racemase [Thermococcus onnurineus NA1] gi|212008907|gb|ACJ16289.1| hypothetical aspartate racemase [Thermococcus onnurineus NA1] Length = 226 Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 63/171 (36%), Gaps = 21/171 (12%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +K+++ + L + + ++ NT + +++ ++ + + A+ + Sbjct: 58 RKKILINAAKALKRAGAEIIAMSANTP-HKVFPDVQKEV-NVPMVSIIEAVAEEIKRRGI 115 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKED 174 + +L T T+ + N + + + ++S+I E Sbjct: 116 KRVLLLGTKTTMSSDFYVNALREEGFEVVVPSEEEQERLNSIIFNELAFENFRNKAW--- 172 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSD 224 I + IE +++ K ++L CT PL + + ++ D ++ Sbjct: 173 -IVELIERYARKEKVKG---VILGCTELPL---AIK--AGDVSIEVFDTAE 214 >gi|1545809|dbj|BAA12209.1| aspartate racemase [Desulfurococcus sp. SY] Length = 235 Score = 51.9 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 45/148 (30%), Gaps = 9/148 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G L L+ + ++ CNTA +D + + V Sbjct: 58 GEDPRPELINSARK-----LESWGADFIIMPCNTAHFFAEDI--QKAIRIPLVSMVEETA 110 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 + + +L+T T++ + + L +E G+K Sbjct: 111 ERVKEMGLRKVGLLATDGTIKGLVYHRALLKRGIAIVTPDRTGQELV--MEGIYRGVKAG 168 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200 +E+ +K KR D I+ CT Sbjct: 169 NVAYGRELLLRVAKKLEKRVDGIIAGCT 196 >gi|242398533|ref|YP_002993957.1| Aspartate racemase [Thermococcus sibiricus MM 739] gi|242264926|gb|ACS89608.1| Aspartate racemase [Thermococcus sibiricus MM 739] Length = 231 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 46/130 (35%), Gaps = 6/130 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K+ ++ CNTA +D ++ + + + +L+T T Sbjct: 74 LEKWGADFIIMPCNTAHFFAEDI--QKAINIPLINMIEEAAEHIKNLGLKKAGLLATEGT 131 Query: 132 LRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 ++ + + + + L + E ++ +K +E +K K Sbjct: 132 VKGLVYHRALLKRGIEIAVPNEKDQKALMDAIYEGIKAGNLEWGR-QKMLE--VAKKLEK 188 Query: 191 RTDVIVLACT 200 R D ++ CT Sbjct: 189 RCDGLIAGCT 198 >gi|254456471|ref|ZP_05069900.1| aspartate racemase [Candidatus Pelagibacter sp. HTCC7211] gi|207083473|gb|EDZ60899.1| aspartate racemase [Candidatus Pelagibacter sp. HTCC7211] Length = 248 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 28/176 (15%) Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-----QSGLI 123 +L+K + VI CNTA D+L+ + + K+ +T ++ I Sbjct: 81 CKLLEKNKCKFIVIPCNTA-HYWFDDLQKKVN----ISIINMPKEVFKFTKQNCKKNSKI 135 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-----CGIKIKEDEIKK 178 +L+T TL N + S L + A G + K Sbjct: 136 GLLATEGTLNTGVYHNFFNKNYDLVQ----PSQTLQKKSVNKAIKLVKMGNVKAAAKAIK 191 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD----WLDNSDSIARRA 230 ++ + K+ +L CT P+ + F+ V +LD + +A A Sbjct: 192 PAINSLLKMKCKKI---ILGCTELPIAIFAFKSF--ENVKSSKIFLDPNLILANSA 242 >gi|300741989|ref|ZP_07072010.1| aspartate racemase [Rothia dentocariosa M567] gi|300381174|gb|EFJ77736.1| aspartate racemase [Rothia dentocariosa M567] Length = 234 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ L ++A NT + R+T ++ L V A A + +L T T Sbjct: 71 LEGAGAQLLLVATNTMHKVAPAIERAT--TVPLLHVVDATATAIQRQGLQRVGLLGTTFT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILAS---RVEEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + + + A + E C ++ E E + ++ + Sbjct: 129 MSDGFYTKRMA--AQGIQTIVPTEPEQAETSRIIFEQLCLGRV-EPEAVQYLQQVITGLK 185 Query: 189 GKRTDVIVLACT 200 + ++L CT Sbjct: 186 EQGAQGVILGCT 197 >gi|296536291|ref|ZP_06898405.1| aspartate racemase [Roseomonas cervicalis ATCC 49957] gi|296263380|gb|EFH09891.1| aspartate racemase [Roseomonas cervicalis ATCC 49957] Length = 235 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 13/135 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ--AAAYTQSGLISILSTP 129 L+ I CNTA E + L V A + A SG + +L+T Sbjct: 73 LEAAGCGAIAIPCNTA--HGWYEAMQAATPLPILHIVDAAAEDLARQGVASGRVGLLATA 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--- 186 TL + + + V + A E + GI + + E E Sbjct: 131 GTLAMRLYQPRLEARG-----YSVITPDEAEMRELVSPGIALVKANRVAEAYAPLAEAAT 185 Query: 187 -KEGKRTDVIVLACT 200 + + +VL CT Sbjct: 186 RLKARGAAAVVLGCT 200 >gi|330948253|gb|EGH48513.1| glutamate racemase [Pseudomonas syringae pv. pisi str. 1704B] Length = 36 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 17/24 (70%) Query: 13 QNSILIFDSGIGGLIVLQKMRFLM 36 + IFDSG+GGL VL ++R L+ Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQLL 34 >gi|227875832|ref|ZP_03993958.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35243] gi|306819113|ref|ZP_07452827.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35239] gi|227843580|gb|EEJ53763.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35243] gi|304648089|gb|EFM45400.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35239] Length = 259 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 13/135 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-----GLISIL 126 L VI CNTA + L++ ++ + A + ++I+ Sbjct: 93 LQDAGAEFLVIPCNTAT----NFLQAVVEAVDIEVVNIVTETVAEIGRKNAGGIKRVAIM 148 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFI 185 +T T+ + + LV S L + G + +E+ G Sbjct: 149 ATEGTIASEIYQETLQLAGYEA---LVPSAQLQKEISGIIYGYVKAGQPVSRELFFGIIN 205 Query: 186 EKEGKRTDVIVLACT 200 + D ++ CT Sbjct: 206 KLRQNEADAVICGCT 220 >gi|125716925|ref|YP_001034058.1| amino acid recemase [Streptococcus sanguinis SK36] gi|125496842|gb|ABN43508.1| Amino acid recemase, putative [Streptococcus sanguinis SK36] Length = 232 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ + L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQDKI-TIPILHIAQATAQALLTDGIQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + + +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLA 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 180 VIDDLKKAGAEAVILGCT 197 >gi|296273109|ref|YP_003655740.1| aspartate racemase [Arcobacter nitrofigilis DSM 7299] gi|296097283|gb|ADG93233.1| aspartate racemase [Arcobacter nitrofigilis DSM 7299] Length = 230 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 52/140 (37%), Gaps = 3/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + + ++K +I NT + +++ ++ + A + Sbjct: 61 AEILSVAAQNIEKASADFLLICTNTMHKVA-PQIQKNI-NIPIVHIADATAKVLQKDIIK 118 Query: 122 LISILSTPATLRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L T T+R + N I ++ + + + + ++ + I +E KKE Sbjct: 119 KVGLLGTAFTMREDFYKNKISENFGIEVLVPNEEDIKIVHKIIYEELCLGIVREESKKEY 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 179 LKIIDKLVSNGAEGIILGCT 198 >gi|228948505|ref|ZP_04110786.1| amino-acid racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228811185|gb|EEM57525.1| amino-acid racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 224 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + S+ L V +A T +++L+T AT Sbjct: 70 LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPETA-KRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I I + + + IK E E +E+ + + Sbjct: 127 VQAGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEARELWSALVLQLKDE 182 Query: 192 TDVIVLACT 200 D ++ACT Sbjct: 183 VDTAIIACT 191 >gi|227529463|ref|ZP_03959512.1| aspartate racemase [Lactobacillus vaginalis ATCC 49540] gi|227350548|gb|EEJ40839.1| aspartate racemase [Lactobacillus vaginalis ATCC 49540] Length = 237 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 23/131 (17%) Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS-GLISILSTPATLRRTYTS 138 V+ CNTA DEL++ + L + + + + +L T T+ Sbjct: 81 VLICNTA-HYSFDELQAA-TDVPILNMLQETVNEIKRLKPDAKRVGLLGTDGTMVSGIYD 138 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIKEDEIKKEIEGCFIEKEG 189 + I + + + ++ + E+ K + ++K IE Sbjct: 139 SYIQNAGYE---EVKATPEIQEMTEDLIYHDIKESGHSDGKKYHELVRKMIEE------- 188 Query: 190 KRTDVIVLACT 200 + D+++L CT Sbjct: 189 EHCDIVILGCT 199 >gi|116493795|ref|YP_805529.1| aspartate racemase [Lactobacillus casei ATCC 334] gi|191637037|ref|YP_001986203.1| Aspartate racemase [Lactobacillus casei BL23] gi|239631050|ref|ZP_04674081.1| aspartate racemase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065371|ref|YP_003787394.1| aspartate racemase [Lactobacillus casei str. Zhang] gi|116103945|gb|ABJ69087.1| Aspartate racemase [Lactobacillus casei ATCC 334] gi|190711339|emb|CAQ65345.1| Aspartate racemase [Lactobacillus casei BL23] gi|239527333|gb|EEQ66334.1| aspartate racemase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300437778|gb|ADK17544.1| Aspartate racemase [Lactobacillus casei str. Zhang] gi|327381064|gb|AEA52540.1| Aspartate racemase [Lactobacillus casei LC2W] gi|327384239|gb|AEA55713.1| Aspartate racemase [Lactobacillus casei BD-II] Length = 250 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 7/128 (5%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134 P VI CNTA D+L + P AI + + +++T T++ Sbjct: 76 NPEFMVIVCNTA-HYFYDQLAAATPIPLLHMPHLAISDMCERFPDEKRVGLIATQGTIQD 134 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EGKRT 192 S+ I + + ++ L V E ++ E+ + +++ + Sbjct: 135 GIYSHEIETSGREV---VLGDQALQDMVTELIYKYVKEKGEVNAALYHRILQRMHDDFNV 191 Query: 193 DVIVLACT 200 +VIVL CT Sbjct: 192 NVIVLGCT 199 >gi|257878492|ref|ZP_05658145.1| aspartate racemase [Enterococcus faecium 1,230,933] gi|257882913|ref|ZP_05662566.1| aspartate racemase [Enterococcus faecium 1,231,502] gi|257884377|ref|ZP_05664030.1| aspartate racemase [Enterococcus faecium 1,231,501] gi|257889308|ref|ZP_05668961.1| aspartate racemase [Enterococcus faecium 1,231,410] gi|257894321|ref|ZP_05673974.1| aspartate racemase [Enterococcus faecium 1,231,408] gi|258615982|ref|ZP_05713752.1| aspartate racemase [Enterococcus faecium DO] gi|260560081|ref|ZP_05832259.1| aspartate racemase [Enterococcus faecium C68] gi|261207431|ref|ZP_05922117.1| aspartate racemase [Enterococcus faecium TC 6] gi|289566469|ref|ZP_06446894.1| aspartate racemase [Enterococcus faecium D344SRF] gi|293560166|ref|ZP_06676668.1| aspartate racemase [Enterococcus faecium E1162] gi|294621572|ref|ZP_06700738.1| aspartate racemase [Enterococcus faecium U0317] gi|314939955|ref|ZP_07847155.1| aspartate racemase [Enterococcus faecium TX0133a04] gi|314942564|ref|ZP_07849398.1| aspartate racemase [Enterococcus faecium TX0133C] gi|314947462|ref|ZP_07850877.1| aspartate racemase [Enterococcus faecium TX0082] gi|314952486|ref|ZP_07855487.1| aspartate racemase [Enterococcus faecium TX0133A] gi|314992417|ref|ZP_07857843.1| aspartate racemase [Enterococcus faecium TX0133B] gi|314996257|ref|ZP_07861316.1| aspartate racemase [Enterococcus faecium TX0133a01] gi|257812720|gb|EEV41478.1| aspartate racemase [Enterococcus faecium 1,230,933] gi|257818571|gb|EEV45899.1| aspartate racemase [Enterococcus faecium 1,231,502] gi|257820215|gb|EEV47363.1| aspartate racemase [Enterococcus faecium 1,231,501] gi|257825668|gb|EEV52294.1| aspartate racemase [Enterococcus faecium 1,231,410] gi|257830700|gb|EEV57307.1| aspartate racemase [Enterococcus faecium 1,231,408] gi|260073916|gb|EEW62240.1| aspartate racemase [Enterococcus faecium C68] gi|260078322|gb|EEW66027.1| aspartate racemase [Enterococcus faecium TC 6] gi|289161734|gb|EFD09609.1| aspartate racemase [Enterococcus faecium D344SRF] gi|291598877|gb|EFF29928.1| aspartate racemase [Enterococcus faecium U0317] gi|291605838|gb|EFF35270.1| aspartate racemase [Enterococcus faecium E1162] gi|313589579|gb|EFR68424.1| aspartate racemase [Enterococcus faecium TX0133a01] gi|313593052|gb|EFR71897.1| aspartate racemase [Enterococcus faecium TX0133B] gi|313595392|gb|EFR74237.1| aspartate racemase [Enterococcus faecium TX0133A] gi|313598668|gb|EFR77513.1| aspartate racemase [Enterococcus faecium TX0133C] gi|313640789|gb|EFS05369.1| aspartate racemase [Enterococcus faecium TX0133a04] gi|313646012|gb|EFS10592.1| aspartate racemase [Enterococcus faecium TX0082] Length = 243 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 66/184 (35%), Gaps = 29/184 (15%) Query: 66 FLFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122 FL DI + +P V+ CNTA +EL++ + L A + +G Sbjct: 64 FLLDDIEKQNLLRPNFIVLTCNTA-HYFFEELQAA-TDIPILHMPREAANELVRQHTTGR 121 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++IL T +++ + + + ++ L ++ + D + +E+ Sbjct: 122 VAILGTEGSMKAGIYEREVKNLGFE---TVIPDTALQEKINYLIYHEIKESDYLNQELYY 178 Query: 183 CFIEK--EGKRTDVIVLACT------------HYP------LIVH-VFRQLSPWPVDWLD 221 +E+ E + ++L CT HYP ++ + + LD Sbjct: 179 EILEEAVERLNCEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAERSEALD 238 Query: 222 NSDS 225 + Sbjct: 239 TASE 242 >gi|228917407|ref|ZP_04080958.1| amino-acid racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228842249|gb|EEM87346.1| amino-acid racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 230 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 67/176 (38%), Gaps = 17/176 (9%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 63 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 119 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + IK E E Sbjct: 120 TA-KRVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINKIITYIKSGEVEEA 174 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 + + + D ++ACT ++ D++D++ +A+ + Sbjct: 175 HRLWEALVLQLKDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVRM 221 >gi|229019989|ref|ZP_04176779.1| amino-acid racemase [Bacillus cereus AH1273] gi|229026224|ref|ZP_04182584.1| amino-acid racemase [Bacillus cereus AH1272] gi|228735070|gb|EEL85705.1| amino-acid racemase [Bacillus cereus AH1272] gi|228741310|gb|EEL91520.1| amino-acid racemase [Bacillus cereus AH1273] Length = 224 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 53/130 (40%), Gaps = 9/130 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+ + CNTA L +EL+ + ++ L V +K T+ +++L+T A Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPENTK--KVALLATEA 125 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T++ + I I + + + + IK E E +++ + + Sbjct: 126 TVQAGIYQDGITKRN----IEYIHNEQWQEMINQIITCIKGGEIEKARKLWSVLVLQLKD 181 Query: 191 RTDVIVLACT 200 D ++ACT Sbjct: 182 EVDTAIIACT 191 >gi|228955032|ref|ZP_04117048.1| amino-acid racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804658|gb|EEM51261.1| amino-acid racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 235 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 68 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPE 124 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + + IK E E Sbjct: 125 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIIMYIKSGEVEEA 179 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ I + D ++ACT Sbjct: 180 RKLWSALIVQLKDEVDTAIIACT 202 >gi|306479849|emb|CBV36091.1| glutamate racemase [Helicobacter pylori] Length = 93 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 8/92 (8%) Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235 + +VI+L CTH+PLI + + D+I + Sbjct: 2 RYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQ--K 59 Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 F SG ++ + Sbjct: 60 YALKKNACTFPKVEFHASGDVIWLEKQAKEWL 91 >gi|306480232|emb|CBV36460.1| glutamate racemase [Helicobacter pylori] Length = 93 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 8/92 (8%) Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLP 235 + VI+L CTH+PLI P P + + D+I + Sbjct: 2 RYYFTPLKILPKVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--K 59 Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 + F SG ++ + Sbjct: 60 YALKNNACAFPKVEFHASGDVIWLEKQAKEWL 91 >gi|222086352|ref|YP_002544886.1| aspartate racemase protein [Agrobacterium radiobacter K84] gi|221723800|gb|ACM26956.1| aspartate racemase protein [Agrobacterium radiobacter K84] Length = 239 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 2/133 (1%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L +I NT LI E+ + S+ + + A +L+ Sbjct: 67 VAHRLQAAGAECVLICTNTM-HLIAPEVAARI-SVPLINIIDETAAALKAAGRVKPLLLA 124 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + ++ + + L + I +DE + + Sbjct: 125 TRYTMEHGFYADRMARNGVSIMVPGADDRTLVHDIIFNELCAGIVKDESRNTLVEIIDRA 184 Query: 188 EGKRTDVIVLACT 200 + D ++L CT Sbjct: 185 KAAGADSVILGCT 197 >gi|218782587|ref|YP_002433905.1| aspartate racemase [Desulfatibacillum alkenivorans AK-01] gi|218763971|gb|ACL06437.1| aspartate racemase [Desulfatibacillum alkenivorans AK-01] Length = 231 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 44/143 (30%), Gaps = 6/143 (4%) Query: 60 LKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + L +I + + C NT + D + L A QA Sbjct: 60 ISAELCGAAKNIQAAGADFMLI--CTNTMHKVAPDI--EAAVDIPLLHIADAAAQALVKD 115 Query: 119 QSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + + +L T T+ + + L + + I L + V + + + Sbjct: 116 EYSKVGLLGTAFTMEQDFYRGRLSRDFGLEVVIPNKEDRELVNDVIFQELCLGQVLSQSR 175 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +E + + I+L CT Sbjct: 176 EEYARIAADLAAQGAQAIILGCT 198 >gi|153835552|ref|ZP_01988219.1| aspartate racemase [Vibrio harveyi HY01] gi|148867877|gb|EDL67100.1| aspartate racemase [Vibrio harveyi HY01] Length = 232 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 53/173 (30%), Gaps = 13/173 (7%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + ++ +I NT + D+++ ++ + A + Sbjct: 61 AIILAQAAKSVEAGGADFILICTNTMHKVA-DQIQQAV-NVPLVHIADATAEKLVADGIK 118 Query: 122 LISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L T T+ + + LI + + + V D+ ++ Sbjct: 119 KVGLLGTRFTMEQDFYKQRLIDKFGVDVVVPRSDDQTIIHNVIYNELCKGEVRDDSRQHY 178 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRA 230 + + + ++L CT L V D ++ A+ A Sbjct: 179 LAIIEKLVEQGAEAVILGCT-------EIAMLVEPHHTDVKLYDTTEIHAKAA 224 >gi|269977467|ref|ZP_06184439.1| aspartate racemase [Mobiluncus mulieris 28-1] gi|269934383|gb|EEZ90945.1| aspartate racemase [Mobiluncus mulieris 28-1] Length = 237 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 13/135 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-----GLISIL 126 L VI CNTA + L++ ++ + A + ++I+ Sbjct: 71 LQDAGAEFLVIPCNTAT----NFLQAVVEAVDIEVVNIVTETVAEIGRKNAGGIKRVAIM 126 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFI 185 +T T+ + + LV S L + G + +E+ G Sbjct: 127 ATEGTIASEIYQETLQLAGYEA---LVPSAQLQKEISGIIYGYVKAGQPVSRELFFGIIN 183 Query: 186 EKEGKRTDVIVLACT 200 + D ++ CT Sbjct: 184 KLRQNEADAVICGCT 198 >gi|89092907|ref|ZP_01165859.1| hypothetical protein MED92_10614 [Oceanospirillum sp. MED92] gi|89082932|gb|EAR62152.1| hypothetical protein MED92_10614 [Oceanospirillum sp. MED92] Length = 233 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 3/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + +++ +I NT + D ++ S+ L A + + Sbjct: 63 ILIEAAKGVERAGADFVLICTNTMHKVA-DAIQENI-SIPILHIADATAEKLKADGVSKV 120 Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T+ + + L + + + + V + ED + Sbjct: 121 GLLGTRFTMEQDFYKQRLTDKHGIEVVVPEAEEREVVHSVIYNELCKGLIEDPSRDRYLK 180 Query: 183 CFIEKEGKRTDVIVLACT 200 + ++L CT Sbjct: 181 IINDLYKSGAQAVILGCT 198 >gi|229163751|ref|ZP_04291696.1| amino-acid racemase [Bacillus cereus R309803] gi|228619718|gb|EEK76599.1| amino-acid racemase [Bacillus cereus R309803] Length = 224 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 57 EAMKKAIIEGAQK-LESTGVEFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + +++L+T AT++ + I I + + + + IK E E Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQTMINQIIIYIKSGEVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D ++ACT Sbjct: 169 RKLWSTLVLQLKDEVDTAIIACT 191 >gi|115358254|ref|YP_775392.1| aspartate racemase [Burkholderia ambifaria AMMD] gi|115283542|gb|ABI89058.1| aspartate racemase [Burkholderia ambifaria AMMD] Length = 233 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 8/168 (4%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L++ + I CN+A LR + L V A A +++L+T Sbjct: 69 LLNRCGVDVIAIPCNSA-HHWYAPLRER-SAAPVLHIVDASVAAVPA-GVRRVAVLATGG 125 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL + + + + + V++ + KI + + + Sbjct: 126 TLVSGFYQAALRARGFEPVMPAVAAQRDIAACIAAVKAGKIDASV--RRLSRALATLARR 183 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 V V+ CT P+ R P +D++ +AR Sbjct: 184 DVGVAVMGCTEIPIAARALRDA---PFALIDSTQELARATVAYAAERG 228 >gi|227534586|ref|ZP_03964635.1| aspartate racemase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187835|gb|EEI67902.1| aspartate racemase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 250 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 7/128 (5%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134 P VI CNTA D+L + P AI + + +++T T++ Sbjct: 76 NPEFMVIVCNTA-HYFYDQLAAVTPIPLLHMPHLAISDMCERFPDEKRVGLIATQGTIQD 134 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EGKRT 192 S+ I + + ++ L V E ++ E+ + +++ + Sbjct: 135 GIYSHEIETSGREV---VLGDQALQDMVTELIYKYVKEKGEVNAALYHRILQRMHDDFNV 191 Query: 193 DVIVLACT 200 +VIVL CT Sbjct: 192 NVIVLGCT 199 >gi|228936066|ref|ZP_04098875.1| amino-acid racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823613|gb|EEM69436.1| amino-acid racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 224 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T T++ I I + + + IK E E Sbjct: 114 TA-KRVALLATETTVQAGIYQEGIIKRN----IEYIHHEKWQDMINQIITCIKSGEIEKA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 E+ + + D ++ACT Sbjct: 169 HELWNTLVLQLRDEVDTAIIACT 191 >gi|308172351|ref|YP_003919056.1| amino acid racemase [Bacillus amyloliquefaciens DSM 7] gi|307605215|emb|CBI41586.1| amino acid racemase [Bacillus amyloliquefaciens DSM 7] gi|328910442|gb|AEB62038.1| amino acid racemase [Bacillus amyloliquefaciens LL3] Length = 226 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 11/131 (8%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K I CNTA + ++L+ + IK+ ++ I++L+T T Sbjct: 70 LEKTGVDFIAIPCNTA-HIYFNQLKKSISVPLLNMVDETIKKIPKDSK--KIALLATSPT 126 Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ + + + +E+ G + + E+ EK Sbjct: 127 VQSGIFQEALIRENYDFLHQDSWQTCVD--QIIEKIKQGQINESITLFDELHRELAEK-- 182 Query: 190 KRTDVIVLACT 200 D ++ACT Sbjct: 183 --VDTAIIACT 191 >gi|304394921|ref|ZP_07376805.1| aspartate racemase [Pantoea sp. aB] gi|304357174|gb|EFM21537.1| aspartate racemase [Pantoea sp. aB] Length = 230 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 41/138 (29%), Gaps = 3/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L++ V+ NT + S + L A + + Sbjct: 63 ILADAARNLERAGAQFIVLCTNTMHKVAAQI--SAATDIPLLHIADATGRRIQQAGVHKV 120 Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+T T+ + + L + + + + V + ++ Sbjct: 121 GLLATRFTMEQDFYRGRLHEQFGLEVITPDEADRLFVHEVIYQELCLGEINPASRRRYRE 180 Query: 183 CFIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 181 IMQRLVAQGAEAIILGCT 198 >gi|307244154|ref|ZP_07526272.1| aspartate racemase [Peptostreptococcus stomatis DSM 17678] gi|306492525|gb|EFM64560.1| aspartate racemase [Peptostreptococcus stomatis DSM 17678] Length = 239 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 11/158 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ V+ CNTA ++ + + + A I IL+T Sbjct: 74 LEAAGADFLVLTCNTA-HYFYKDIVEGL-GVPLINMIEETVVHAKKQGHRKIGILATTGN 131 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 +R ++ + ++ + + + G K D+ K IE + Sbjct: 132 IRTGLYQDMCVAQSMDYYVPTQQVQDMVMDIIYNQVKAGKKADMDQFNKIIE----VLKA 187 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + D +L CT +I + P ++D+S+ +A Sbjct: 188 EGCDCAILGCTELSIIKKD--EKLPND-FFVDSSEVLA 222 >gi|229112217|ref|ZP_04241757.1| amino-acid racemase [Bacillus cereus Rock1-15] gi|228671201|gb|EEL26505.1| amino-acid racemase [Bacillus cereus Rock1-15] Length = 224 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQAIPK 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 +++L+T AT++ + I I + + + + IK E E Sbjct: 114 NI-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEKA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D +++ACT Sbjct: 169 RKLWSALVVQLKDEVDTVIIACT 191 >gi|222098225|ref|YP_002532282.1| aspartate racemase family protein [Bacillus cereus Q1] gi|221242283|gb|ACM14993.1| aspartate racemase family protein [Bacillus cereus Q1] Length = 224 Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 7/129 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + S+ L V Q +++L+T AT Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLQTIPKN-VKRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I I + + + IK E E E+ + + Sbjct: 127 VQAGIYQDGITKRD----IQYIHHEKWQEMINQIITWIKSGELEEAHELWNALVLQLRDE 182 Query: 192 TDVIVLACT 200 D ++ACT Sbjct: 183 VDTAIIACT 191 >gi|197106374|ref|YP_002131751.1| aspartate racemase [Phenylobacterium zucineum HLK1] gi|196479794|gb|ACG79322.1| aspartate racemase [Phenylobacterium zucineum HLK1] Length = 237 Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 62/167 (37%), Gaps = 11/167 (6%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L + + CNTA +L + + + +AAA + + Sbjct: 65 VLAEMAGALRGAGADVLAMPCNTA--HAHSDLIQRASGLPLIDMIDLAAEAAAESGAVRA 122 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACGIKIKEDEIKKEIEG 182 +L T L+ + + + + +E Y E+ ++++ Sbjct: 123 GVLGTKGALK--LYREYLA--ARGLGMVSLPPERQEAFMETLYRIKGGDLSPEVSRQMKA 178 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 E +V+V CT PL++ + + V+ +D +D +ARR Sbjct: 179 FADELVKGGAEVLVAGCTELPLVLDP-QDV---KVELVDPADLLARR 221 >gi|261822403|ref|YP_003260509.1| aspartate racemase [Pectobacterium wasabiae WPP163] gi|261606416|gb|ACX88902.1| aspartate racemase [Pectobacterium wasabiae WPP163] Length = 236 Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 9/159 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + VI NT + D R++ + L A + + +L T T Sbjct: 73 LRQAGADAIVICTNTMHKVADDVERAS--QLPLLHIADATGASLKQHGLKKVGLLGTRYT 130 Query: 132 LRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + I + + + +R+ + D + G + E + Sbjct: 131 MEQDFYRQRIQERFGVDVIVPDQAGKEAVNRIIYDELCLGNINDTSRLVYRGIIQQLEQQ 190 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD--SIA 227 + I+L CT PL++ + V D S +IA Sbjct: 191 GAEGIILGCTEIPLLISA-QDA---KVPLFDTSKLHAIA 225 >gi|119776018|ref|YP_928758.1| hypothetical protein Sama_2886 [Shewanella amazonensis SB2B] gi|119768518|gb|ABM01089.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 225 Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 40/139 (28%), Gaps = 16/139 (11%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159 + L A + + +L T T+ + + LI Y + + + L Sbjct: 93 GIPILHIADATAERLKSDGIDRVGLLGTRFTMEQDFYKSRLIERYGIEVLVPNAAERELV 152 Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---P 216 V + + + ++ + I+L CT L Sbjct: 153 HDVIYNELCLGKIKPKSREVYLAIIDSLANAGAEAIILGCT-------EIALLVEQNHTH 205 Query: 217 VDWLDN----SD-SIARRA 230 + D ++ ++A+ Sbjct: 206 IKLYDTTQIHAEQAVAKAL 224 >gi|94312931|ref|YP_586140.1| putative aspartate racemase [Cupriavidus metallidurans CH34] gi|93356783|gb|ABF10871.1| putative aspartate racemase [Cupriavidus metallidurans CH34] Length = 242 Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 37/137 (27%), Gaps = 3/137 (2%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 M + ++ V+ NT + FL V A + Sbjct: 64 MQQAARQVEAGGADFVVLCTNTM--HKLAPAIEAVLDVPFLHIVDPTADALRRAGIERVG 121 Query: 125 ILSTPATLRRTYTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + + Q I L V + E + + Sbjct: 122 LLGTRFTMEQDFYRARMEQRHGIQVVIPDQDDRTLVHDVIYDELCHGVVRSESRAVYQRI 181 Query: 184 FIEKEGKRTDVIVLACT 200 + ++L CT Sbjct: 182 IESLKAGGAQGVILGCT 198 >gi|212637275|ref|YP_002313800.1| aspartate racemase [Shewanella piezotolerans WP3] gi|212558759|gb|ACJ31213.1| Aspartate racemase [Shewanella piezotolerans WP3] Length = 197 Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++K +I NT + E+ + ++ L A ++ + +L T T Sbjct: 32 VEKAGADFILICTNTMHKVA-PEIEANI-TIPILHIADATAESLLDHGIKKVGLLGTRFT 89 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + L Y + + S I + + D+ + E + Sbjct: 90 MEQDFYKGRLTEKYNIEVIVPEQSDRIEIHEIIYKELCRGVIRDDSRDRYIQIIDELRAQ 149 Query: 191 RTDVIVLACT 200 + ++L CT Sbjct: 150 GVEAVILGCT 159 >gi|209695461|ref|YP_002263390.1| aspartate racemase [Aliivibrio salmonicida LFI1238] gi|208009413|emb|CAQ79689.1| aspartate racemase [Aliivibrio salmonicida LFI1238] Length = 237 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 35/167 (20%) Query: 56 EDHALKKRLMFLFS-------------DILDKYQPVLSVIACNTA-------FTLIKDEL 95 + R F+ D L++ VI CNTA Sbjct: 42 SVPQIPDRTAFIMGHGTDPYPELKHSFDQLEQSGAECIVIPCNTAHYWYPQLSATS---- 97 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC--HIHLV 153 + + + ++ Q + ++ +L+T AT++ ++ Y L Sbjct: 98 -----HVHTISIIDSVVQETQLRKHKIVGLLATTATMKTKMYQQKLNQYNIDVIETDDLQ 152 Query: 154 SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 ++A E A ++ K + F + + + ++ CT Sbjct: 153 QQAVMAGIYEVKAGNVEKG----KAMMLPVFEDMLAQGAEAVIFGCT 195 >gi|315230092|ref|YP_004070528.1| aspartate racemase [Thermococcus barophilus MP] gi|315183120|gb|ADT83305.1| aspartate racemase [Thermococcus barophilus MP] Length = 230 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 12/164 (7%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + ++ CNTA DE++ ++ + + + + +L+T T Sbjct: 73 LESWGADFIIMPCNTA-HFFADEIQRAI-NIPLINMIEETAEYVKQLGIKRVGLLATTGT 130 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + + + + GIK + E +E+ +K K Sbjct: 131 VVSGIYQRALEK--KGIKVIIPNKEEQENVMRGIYEGIKANKFEFGRELLLEIAKKLEKE 188 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIARRARCL 233 ++ I+ CT V L P V +D D IA +A L Sbjct: 189 SEGIIAGCT------EVSVALKPEDLEVPLIDPMDVIAEKAVKL 226 >gi|114284|sp|P29079|RACD_ENTFC RecName: Full=Aspartate racemase gi|47644|emb|CAA43598.1| aspartate racemase [Streptococcus thermophilus] Length = 243 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 30/159 (18%) Query: 66 FLFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122 FL DI + +P V+ CNTA +EL++ + L A + +G Sbjct: 64 FLLDDIEKQNLLRPNFIVLTCNTA-HYFFEELQAA-TDIPILHMPREAANELVRQHTTGR 121 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKEDEI 176 ++IL T +++ + + + I ++ +I E ++ + + Sbjct: 122 VAILGTEGSMKAGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEIL 181 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT------------HYP 203 ++ +E EK ++L CT HYP Sbjct: 182 EEAVERLNCEK-------VILGCTELSLMNEFAEDNHYP 213 >gi|306480416|emb|CBV36636.1| glutamate racemase [Helicobacter pylori] Length = 81 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 8/81 (9%) Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 58 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 KVEFHASGDVVWLEKQAKEWL 79 >gi|240103398|ref|YP_002959707.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3] gi|239910952|gb|ACS33843.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3] Length = 234 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 63/195 (32%), Gaps = 23/195 (11%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVP 109 G L L+ + ++ CNTA I+ +R + + + Sbjct: 57 GPDPRPELIDSAKK-----LESWGADFIIMPCNTAHFFADTIQRAIR-----IPLVSMIE 106 Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 + +L+T T++ + + L + GI Sbjct: 107 ETAERVKGMGLRKAGLLATDGTIKGLIYHRALLKRGVSIAVPGKKDQRLVMKA--IYEGI 164 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIA 227 K E+ +E+ K +R+DVI+ CT V L P V +D D IA Sbjct: 165 KAGNLELGRELLLKVAGKLQRRSDVIIAGCT------EVSVALKPEDLSVPLIDPLDVIA 218 Query: 228 RRARCLLPRINTHQT 242 +A L + +T Sbjct: 219 EKAVKLALGLEELRT 233 >gi|306480172|emb|CBV36402.1| glutamate racemase [Helicobacter pylori] Length = 78 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 8/78 (10%) Query: 196 VLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 +L CTH+PLI P P + + D+I + + F Sbjct: 1 ILGCTHFPLIARQIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYTLKNNAHAFPKVE 58 Query: 250 LFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 FHASGDVIWLEKQAKEWL 76 >gi|257898273|ref|ZP_05677926.1| aspartate racemase [Enterococcus faecium Com15] gi|257836185|gb|EEV61259.1| aspartate racemase [Enterococcus faecium Com15] Length = 243 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 30/159 (18%) Query: 66 FLFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122 FL DI + +P V+ CNTA +EL++ + L A + +G Sbjct: 64 FLLDDIEKQNLLRPNFIVLTCNTA-HYFFEELQAA-TDIPILHMPREAANELVRQHTTGR 121 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKEDEI 176 ++IL T +++ + + + I ++ +I E ++ + + Sbjct: 122 VAILGTEGSMKAGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEIL 181 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT------------HYP 203 ++ +E EK ++L CT HYP Sbjct: 182 EEAVERLNCEK-------VILGCTELSLMHEFAEDNHYP 213 >gi|154151570|ref|YP_001405188.1| aspartate racemase [Candidatus Methanoregula boonei 6A8] gi|154000122|gb|ABS56545.1| aspartate racemase [Methanoregula boonei 6A8] Length = 240 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 18/146 (12%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + VIA NT + +L + L A + +++L T T Sbjct: 74 LKRGGADFIVIASNTLNSRA--DLIEQSTGLPVLRIYDVTGAAVNKSGLKKVALLGTKYT 131 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC----FIEK 187 + + + + + + ++ E+ I + ++ +I +I Sbjct: 132 MEAPFYRDTLKNKYGIDVVVPNAT-------EQDYINNVIFDQLVRNDIRNDSREGYIRI 184 Query: 188 EGKRTDV-----IVLACTHYPLIVHV 208 + D ++L CT PL+++ Sbjct: 185 INRLVDEEGAQGVILGCTEIPLLINQ 210 >gi|325168427|ref|YP_004280217.1| aspartate racemase [Agrobacterium sp. H13-3] gi|325064150|gb|ADY67839.1| Aspartate racemase [Agrobacterium sp. H13-3] Length = 235 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 4/139 (2%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R++ + L + L ++A NT + D++ S+ F+ A A Sbjct: 68 RILNEHAIALQRGGADLLILATNTMHKVA-DKIVGRV-SIPFVHIADATATAILDRGFRR 125 Query: 123 ISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++T T+ +T YT LI +S + E C ++E+ + E Sbjct: 126 PGLMATAFTMEQTFYTDRLIAQGLSPTIPEADDRTETHRIIYEELCRDIVREES-RLTYE 184 Query: 182 GCFIEKEGKRTDVIVLACT 200 K D ++L CT Sbjct: 185 RIAQRLVDKGCDCLILGCT 203 >gi|313680995|ref|YP_004058734.1| aspartate racemase [Oceanithermus profundus DSM 14977] gi|313153710|gb|ADR37561.1| aspartate racemase [Oceanithermus profundus DSM 14977] Length = 230 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 62/216 (28%), Gaps = 29/216 (13%) Query: 31 KMRFLMPEYH---FIYVADDVGFPYGNW-----EDHALKKRLMFLFSDILDKYQPVLSVI 82 R L P+ +Y D + AL + L+ ++ VI Sbjct: 26 AARRLGPDRSAEILLYSLDWARI---ERLQHAGDWDALAEELITGARRLVL-GGAGFLVI 81 Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 A NT + E + L A +A +L T T+ + + + Sbjct: 82 ATNTMHKVA--EAVGAVSGLEVLHIADATARALQAAGVRRAGLLGTRFTMEEPFLRDKLA 139 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202 + + + + R+ +E ++ + + IVL CT Sbjct: 140 GWGLEVLVPGPADREAVHRIIYDELVQGEIREESRRVYRRVMARLAERGAEGIVLGCT-- 197 Query: 203 PLIVHVFRQLSPW---PVDWLDN----SD-SIARRA 230 L PV D ++ ++AR Sbjct: 198 -----EIGLLVGPEDAPVPVFDTTRIHAEAAVARAL 228 >gi|227551698|ref|ZP_03981747.1| aspartate racemase [Enterococcus faecium TX1330] gi|257887166|ref|ZP_05666819.1| aspartate racemase [Enterococcus faecium 1,141,733] gi|257895703|ref|ZP_05675356.1| aspartate racemase [Enterococcus faecium Com12] gi|293377687|ref|ZP_06623876.1| aspartate racemase [Enterococcus faecium PC4.1] gi|293571882|ref|ZP_06682898.1| aspartate racemase [Enterococcus faecium E980] gi|227179139|gb|EEI60111.1| aspartate racemase [Enterococcus faecium TX1330] gi|257823220|gb|EEV50152.1| aspartate racemase [Enterococcus faecium 1,141,733] gi|257832268|gb|EEV58689.1| aspartate racemase [Enterococcus faecium Com12] gi|291608136|gb|EFF37442.1| aspartate racemase [Enterococcus faecium E980] gi|292643687|gb|EFF61808.1| aspartate racemase [Enterococcus faecium PC4.1] Length = 243 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 30/159 (18%) Query: 66 FLFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122 FL DI + +P V+ CNTA +EL++ + L A + +G Sbjct: 64 FLLDDIEKQNLLRPNFIVLTCNTA-HYFFEELQAA-TDIPILHMPREAANELVRQHTTGR 121 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKEDEI 176 ++IL T +++ + + + I ++ +I E ++ + + Sbjct: 122 VAILGTEGSMKAGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEIL 181 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT------------HYP 203 ++ +E EK ++L CT HYP Sbjct: 182 EEAVERLNCEK-------VILGCTELSLMHEFAEDNHYP 213 >gi|306480495|emb|CBV36712.1| glutamate racemase [Helicobacter pylori v225d] Length = 81 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 8/81 (9%) Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I R F Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLRQ--KYALKKNACAFP 58 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 KVEFHASGDVIWLEKQAKEWL 79 >gi|251797252|ref|YP_003011983.1| aspartate racemase [Paenibacillus sp. JDR-2] gi|247544878|gb|ACT01897.1| aspartate racemase [Paenibacillus sp. JDR-2] Length = 251 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 7/141 (4%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ-SG 121 RL+ +L+ + V+ CNTA D++++ +++ A + + Sbjct: 68 RLIQADIALLEHAEVSNIVMPCNTA-HRFFDDIQAMTAIPIVNMVRETVEELLAKHKANR 126 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKE 179 I IL+T AT++ S+++ Y + I S I++ E+ ++ Sbjct: 127 KIGILATDATIQTDIYSDVLRQYGLEPFIPSPSMQQSIMSIIYEDIKKTGHSDSRVLEGI 186 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 + + ++ D +VLACT Sbjct: 187 MTEML---QREKCDGVVLACT 204 >gi|261414956|ref|YP_003248639.1| aspartate racemase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371412|gb|ACX74157.1| aspartate racemase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325824|gb|ADL25025.1| aspartate racemase family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 229 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 47/139 (33%), Gaps = 2/139 (1%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + L+ VIA NT L+ R + L A + Sbjct: 61 AAILADAAKRLECAGADFIVIATNTMHKLVPQIEREIH--IPILHIADAAATSVIRDGFT 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++L T T+ + + + + + + + + + V + D + E + Sbjct: 119 KVALLGTKFTMTQDFIKDRLKGAGLEVIVPDAPDIEIVNNVIFNELCLGKVLDASRAEYQ 178 Query: 182 GCFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 179 RIIESLKERGAECVILGCT 197 >gi|306480476|emb|CBV36694.1| glutamate racemase [Helicobacter pylori] Length = 93 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 8/92 (8%) Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235 + V++L CTH+PLI H + + D+I + Sbjct: 2 RYYFTPLEILPKVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--K 59 Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 F SG ++ + Sbjct: 60 YALKKNACAFPRIEFHASGDVIWLEKQAKEWL 91 >gi|45358302|ref|NP_987859.1| Asp/Glu racemase:aspartate racemase [Methanococcus maripaludis S2] gi|44921060|emb|CAF30295.1| Asp/Glu racemase:Aspartate racemase [Methanococcus maripaludis S2] Length = 234 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 72/217 (33%), Gaps = 34/217 (15%) Query: 14 NSILIFDSGIGGLI----------VLQKMRFLM--PEYH--FIYVADDVGFPYGNW-EDH 58 +I + IGGL + Q +R + P +Y D F + Sbjct: 2 KTIGL----IGGLSWESTQEYYRIINQSIRDKLGAPHSAKCILYSVDFAEF---DKLSHD 54 Query: 59 A---LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115 + + + L+K +I NT T+ D + ++ + V A+ + Sbjct: 55 EEWDVIAEKLTDIAKTLEKAGAEGILICTNTMHTVA-DSVSENI-NIPLVHIVDAVAEDI 112 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + +L T T+ + + S + I ++ V ++ Sbjct: 113 KQKNIKKVGLLGTKFTMEQEFYS---GRLKEKHEIDVIIPSDEERDVVHNVIYKELVSGI 169 Query: 176 IKKEIEGCFIE----KEGKRTDVIVLACTHYPLIVHV 208 IK+E +++ + I+L CT PL++ Sbjct: 170 IKEESRQKYLKIIDNLVENGAEGIILGCTEIPLLIKQ 206 >gi|323484480|ref|ZP_08089846.1| aspartate racemase [Clostridium symbiosum WAL-14163] gi|323692541|ref|ZP_08106774.1| aspartate racemase [Clostridium symbiosum WAL-14673] gi|323402258|gb|EGA94590.1| aspartate racemase [Clostridium symbiosum WAL-14163] gi|323503407|gb|EGB19236.1| aspartate racemase [Clostridium symbiosum WAL-14673] Length = 225 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 42/129 (32%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K VI NT ++ T + + A ++ +++L T T Sbjct: 66 LEKAGADYLVICTNTMHKVVPQI--QTHIQIPIIHIAEATADVLKESRIRKVALLGTKYT 123 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + + I + + V + + K++ + + Sbjct: 124 MTQDFYKKKLTDAGIEVLIPEQPDIETVNNVIFKELCRGVVSENSKQQYLAIIDKLAAEG 183 Query: 192 TDVIVLACT 200 ++L CT Sbjct: 184 AQGVILGCT 192 >gi|225866744|ref|YP_002752122.1| aspartate racemase family protein [Bacillus cereus 03BB102] gi|225790790|gb|ACO31007.1| aspartate racemase family protein [Bacillus cereus 03BB102] Length = 224 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L EL+ + S+ L V Q Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFKELQQSI-SIPILNIVDETLQVIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + +++L+T AT++ + I I + + + IK E E Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQESINQIISCIKGGEIEKA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +E+ + + D ++ACT Sbjct: 169 RELWNALVLQLKDEVDTAIIACT 191 >gi|299535194|ref|ZP_07048518.1| aspartate racemase [Lysinibacillus fusiformis ZC1] gi|298729315|gb|EFI69866.1| aspartate racemase [Lysinibacillus fusiformis ZC1] Length = 233 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 46/132 (34%), Gaps = 10/132 (7%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L + I CNTA T E+ P + L + K+AA + IL+T Sbjct: 73 LASVGAHIIAIPCNTAHTF-YQEIEEGSP-IPVLHMIRETAKRAADLGA-KRVGILATTG 129 Query: 131 TLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL + + + + S +++ + G + ++ + E Sbjct: 130 TLTSRMYQEALEQFGITPVVPDNEMRSYVMSIIYDYVKAGKDVTLEDWQPIEEAMLAL-- 187 Query: 189 GKRTDVIVLACT 200 D IVL CT Sbjct: 188 --NCDRIVLGCT 197 >gi|229048455|ref|ZP_04194020.1| amino-acid racemase [Bacillus cereus AH676] gi|228722885|gb|EEL74265.1| amino-acid racemase [Bacillus cereus AH676] Length = 235 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V Q+ Sbjct: 68 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQSIPE 124 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + +++L+T AT++ + I I + + + + IK E E Sbjct: 125 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEKA 179 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D +++ACT Sbjct: 180 RKLWSALVVQLKDEVDTVIIACT 202 >gi|226312934|ref|YP_002772828.1| amino acid racemase [Brevibacillus brevis NBRC 100599] gi|226095882|dbj|BAH44324.1| probable amino acid racemase [Brevibacillus brevis NBRC 100599] Length = 228 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 67/172 (38%), Gaps = 21/172 (12%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130 L+K I CNTA + ++++++ S+ L + I++ ++ +++L+T Sbjct: 70 LEKTDVDFIAIPCNTA-HIYFNQIKNSV-SVPILNMIDETIREIPKNSK--KVALLATNP 125 Query: 131 TLRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ + + + +++ +I E + + F + Sbjct: 126 TVQSGIFQDALVREGYDFLHQDRWQTC---VNQIIAKIKQGQIDESLL---LWDEFYSEL 179 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARRARCLLPR 236 + D ++ACT ++ + ++D+ + ++ + L+ R Sbjct: 180 AETIDTAIIACTDLNVVTDKISN----DISFVDSSTCLAQAVVHKYLSLMDR 227 >gi|154685011|ref|YP_001420172.1| hypothetical protein RBAM_005490 [Bacillus amyloliquefaciens FZB42] gi|154350862|gb|ABS72941.1| RacX [Bacillus amyloliquefaciens FZB42] Length = 226 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 9/130 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K I CNTA + ++++ + I + ++ ++L+T T Sbjct: 70 LEKTGVDFIAIPCNTA-HIYFNQIKKSISVPLLNMVDETINKIPKGSKKA--ALLATVPT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILAS-RVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 ++ ++ +H VS I +E+ G + + E+ EK Sbjct: 127 VQSGIFQEALNREGYD-FLHQVSWQIYVDHIIEKIKQGQINEAGTLYDELHRELAEK--- 182 Query: 191 RTDVIVLACT 200 D +++ACT Sbjct: 183 -VDTVIIACT 191 >gi|269956674|ref|YP_003326463.1| aspartate racemase [Xylanimonas cellulosilytica DSM 15894] gi|269305355|gb|ACZ30905.1| aspartate racemase [Xylanimonas cellulosilytica DSM 15894] Length = 242 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 50/142 (35%), Gaps = 24/142 (16%) Query: 72 LDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL--ISIL 126 L+ + L V+ CNTA + + + ++ F+ + +AA GL + +L Sbjct: 73 LEGFGAELLVMPCNTAHYFTQQVLEAI-----TVPFVSIIDVTVEAALARVPGLTAVGLL 127 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVS--------SMILASRVEEYACGIKIKEDEIKK 178 +T T+ + + ++I A ++ G+ D ++ Sbjct: 128 ATAGTVASRVYHDAFA--ARGVEVLTPDDDGTTGDQAIINAVIYDQVKAGLPADADALRA 185 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 + V+VL CT Sbjct: 186 VAAR----LVERGAGVVVLGCT 203 >gi|196044013|ref|ZP_03111250.1| probable amino-acid racemase [Bacillus cereus 03BB108] gi|229187012|ref|ZP_04314163.1| amino-acid racemase [Bacillus cereus BGSC 6E1] gi|196025349|gb|EDX64019.1| probable amino-acid racemase [Bacillus cereus 03BB108] gi|228596464|gb|EEK54133.1| amino-acid racemase [Bacillus cereus BGSC 6E1] Length = 224 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L EL+ + S+ L V Q Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFKELQQSI-SIPILNIVDETLQVIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + +++L+T AT++ + I I + + + IK E E Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQESINQIISCIKGGEIEKA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +E+ + + D ++ACT Sbjct: 169 RELWNALVLQLKDEVDTAIIACT 191 >gi|91790218|ref|YP_551170.1| aspartate racemase [Polaromonas sp. JS666] gi|91699443|gb|ABE46272.1| aspartate racemase [Polaromonas sp. JS666] Length = 241 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 7/134 (5%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ--AAAYTQSGLISILS 127 L+ +VI CNTA +L+ + M + V ++ + A G I +L Sbjct: 69 QFLESSGCSCAVIPCNTA-HYWYPDLQMSVK-MPLIHIVSSVVENLHARGIDGGRIGLLG 126 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE-DEIKKEIEGCFIE 186 TPAT+ + + + + + + +K E + Sbjct: 127 TPATVNSGLYKDKLT--NAGYTVLPYTEDDVLQLCVRPIQAVKQNRLREAGTALADSVRV 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LYDRGATAVILGCT 198 >gi|229193040|ref|ZP_04319996.1| amino-acid racemase [Bacillus cereus ATCC 10876] gi|228590487|gb|EEK48350.1| amino-acid racemase [Bacillus cereus ATCC 10876] Length = 224 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFKELQRSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + + IK E E Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D ++ACT Sbjct: 169 RKLWSALVVQLKDEVDTAIIACT 191 >gi|238918933|ref|YP_002932447.1| aspartate racemase, [Edwardsiella ictaluri 93-146] gi|238868501|gb|ACR68212.1| aspartate racemase, putative [Edwardsiella ictaluri 93-146] Length = 239 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 44/129 (34%), Gaps = 4/129 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ VI CNTA DELR + + L V A + I +L+T AT Sbjct: 71 LEQAGAECIVIPCNTA-HFWFDELRQSC-HVELLNIVGATLNEVCASGQRHIGLLATDAT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L I ++ +C +E ++ + + Sbjct: 129 LYMGLYQQAIEAHGLRCIAPDRGGQEQV--MESIYALKAGDAGHARRLMARQADALFARG 186 Query: 192 TDVIVLACT 200 +IVL CT Sbjct: 187 AQIIVLGCT 195 >gi|118479884|ref|YP_897035.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam] gi|118419109|gb|ABK87528.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam] Length = 224 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L EL+ + S+ L V Q Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFKELQQSI-SIPILNIVDETLQVIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + +++L+T AT++ + I I + + + IK E E Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQESINQIISCIKGGEIEKA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +E+ + + D ++ACT Sbjct: 169 RELWNALVLQLKDEVDTAIIACT 191 >gi|206969422|ref|ZP_03230376.1| aspartate racemase family protein [Bacillus cereus AH1134] gi|206735110|gb|EDZ52278.1| aspartate racemase family protein [Bacillus cereus AH1134] Length = 224 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT++ + I I + + + + IK E E Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 ++ + + D ++ACT Sbjct: 169 HKLWNALVVQLKDEVDTAIIACT 191 >gi|56965360|ref|YP_177092.1| aspartate racemase [Bacillus clausii KSM-K16] gi|56911604|dbj|BAD66131.1| aspartate racemase [Bacillus clausii KSM-K16] Length = 226 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 11/141 (7%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 + + + L+K I CNTA + D+++++ IK+ S Sbjct: 60 EMAIINGAKRLEKTGVDFIAIPCNTA-HVYFDQVKNSLSIPLLNMVEETIKRVPE--HSK 116 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 +++L+T T++ + + + + +E+ G + E+ E Sbjct: 117 KVALLATIPTVQSGIFQEALAKEGYEFLHQDDWQTCIN--QIIEKIKQGQISESLELWDE 174 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 + + D ++ACT Sbjct: 175 L--YL--QLADTIDTAIIACT 191 >gi|84498424|ref|ZP_00997194.1| putative aspartate racemase [Janibacter sp. HTCC2649] gi|84381167|gb|EAP97051.1| putative aspartate racemase [Janibacter sp. HTCC2649] Length = 235 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 21/170 (12%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTP 129 L++ + CNTA + + ++ + V +AA G + IL+T Sbjct: 73 LERAGAKFIALPCNTA--QAFQDEVAAAVTIPVIDIVAVTVEAAKAAVPGLTTLGILATD 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILA-----SRVEEYA-CGIKIKEDEIKKEIEGC 183 TLR H + ++ + S + + G+ + D +E Sbjct: 131 GTLRAETY----HRAAEAAGLTPIAPDDVVQKDVMSMIYDGVKAGMPVSRDRFDAAVE-- 184 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 K IVL CT ++ ++ V +D+ D++A R L Sbjct: 185 --HLRTKGAGAIVLGCTELSILQTDL-KVDEPDV--VDSLDALAARTVVL 229 >gi|121533969|ref|ZP_01665795.1| aspartate racemase [Thermosinus carboxydivorans Nor1] gi|121307480|gb|EAX48396.1| aspartate racemase [Thermosinus carboxydivorans Nor1] Length = 230 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 3/138 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + +A NTA ++ DE+ S P + + V + A + I T T Sbjct: 71 LAAGGAEFAAMAANTA-HIVFDEVNSQSP-LPLISIVDETCKYAQSKNCKSVVIFGTAFT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSM-ILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + SN Y + + + + + ++ + ++ K Sbjct: 129 MSSGLYSNAFAKYGIDAFVPTADEQKAIHNIIFPNLQAGIVLPEDKRTILQIAKRMIAEK 188 Query: 191 RTDVIVLACTHYPLIVHV 208 D +VL CT PLI+ Sbjct: 189 NADALVLGCTELPLIIQE 206 >gi|300119117|ref|ZP_07056822.1| aspartate racemase [Bacillus cereus SJ1] gi|298723511|gb|EFI64248.1| aspartate racemase [Bacillus cereus SJ1] Length = 223 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ I CNTA L +EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAIPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT+R + I + + + IK E + Sbjct: 114 TA-KRVALLATEATVRAEIYQDGIAKRNIDYIHYEQ----WQESINQIITYIKSGEVKEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 + + + D ++ACT Sbjct: 169 HRLWDALVLQLKNEVDTAIIACT 191 >gi|227822529|ref|YP_002826501.1| aspartate racemase protein [Sinorhizobium fredii NGR234] gi|227341530|gb|ACP25748.1| aspartate racemase protein [Sinorhizobium fredii NGR234] Length = 239 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 39/140 (27%), Gaps = 10/140 (7%) Query: 65 MFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + + L +I NT A + + + + S Sbjct: 66 LSEVARALQSGGADCVLICTNTMHLIADAVAASV------DIPLINIIDETALRLKERGS 119 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +L+T T+ + + + ++ + L + D ++ + Sbjct: 120 RRPLLLATRYTMEHGFYAERMKAHGIDLIVPDADGRKLTHEIIFDELCAGKVLDTSREAL 179 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + D ++L CT Sbjct: 180 MTLIETAKAEGADAVILGCT 199 >gi|298717599|ref|YP_003730241.1| aspartate/glutamate racemase [Pantoea vagans C9-1] gi|298361788|gb|ADI78569.1| putative aspartate/glutamate racemase [Pantoea vagans C9-1] Length = 246 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 3/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L++ V+ NT + S + L A + + Sbjct: 79 ILAEAARNLERAGAQFIVLCTNTMHKVAAQI--SAATGIPLLHIADATGRRIQQAGIRKV 136 Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+T T+ + + L + + + + V + + ++ Sbjct: 137 GLLATRFTMEQDFYHGRLQQQFGLEVMTPDEADRLFVHEVIYHELCLGEINPASRRRYRE 196 Query: 183 CFIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 197 IMQSLVAQGAEAIILGCT 214 >gi|115384100|ref|XP_001208597.1| predicted protein [Aspergillus terreus NIH2624] gi|114196289|gb|EAU37989.1| predicted protein [Aspergillus terreus NIH2624] Length = 237 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 48/155 (30%), Gaps = 9/155 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ ++ACNT + + ++ L V A Q + +L + T Sbjct: 73 LEAAGADFFLVACNTMHMVAAQI--AAHTTIPMLHIVDATAQKIVEAGHKTVGLLGSRYT 130 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + Y S L +Y + + DE + +G + Sbjct: 131 MTGDYFSGRLSSNYGLDVLVPDEKQQEDVHSALFNELARGVFRDETRMLFKGVMESLVER 190 Query: 191 RTDVIVLACTHYPLI-VHVFRQLSPWPVDWLDNSD 224 VI+L CT + L+ PV LD Sbjct: 191 GAQVIILGCTEFGLLVREE-----DSPVPILDTGA 220 >gi|229127621|ref|ZP_04256610.1| hypothetical protein bcere0015_20700 [Bacillus cereus BDRD-Cer4] gi|228655698|gb|EEL11547.1| hypothetical protein bcere0015_20700 [Bacillus cereus BDRD-Cer4] Length = 230 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 51/140 (36%), Gaps = 8/140 (5%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L K +I NT ++ ++++ + L A + + Sbjct: 63 ILGNVAYSLQKGGADFIIICTNTMHKVV-EKIKEKI-DIPVLHIADATAKEIKRKDIQKV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180 +L T T+ + + + I + + + ++ + V E I ++ E K + Sbjct: 121 GLLGTKYTMEQDFYKSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKIVVQSREYYKRV 180 Query: 181 EGCFIEKEGKRTDVIVLACT 200 +++ + +L CT Sbjct: 181 IEELVQEGAQGI---ILGCT 197 >gi|91224669|ref|ZP_01259930.1| aspartate racemase [Vibrio alginolyticus 12G01] gi|91190557|gb|EAS76825.1| aspartate racemase [Vibrio alginolyticus 12G01] Length = 232 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 42/155 (27%), Gaps = 13/155 (8%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++K +I NT + ++ L A + + +L T T Sbjct: 71 IEKGGADFILICTNTMHKVASQI--EASINIPILHIADATAELLREKGVQKVGLLGTQFT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + L Y I + ++E + + + + Sbjct: 129 MEQDFYKGRLSDRYGLDVVIPDQDDRSKVHNIIYKELCQGEIKEESRTIYLQIIEKLKEQ 188 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222 + ++L CT L V LD Sbjct: 189 GAEAVILGCT-------EIALLVNQSHTDVTLLDT 216 >gi|306480201|emb|CBV36430.1| glutamate racemase [Helicobacter pylori] Length = 81 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 8/81 (9%) Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 58 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 KVEFHASGDVIWLEKQAKEWL 79 >gi|255994450|ref|ZP_05427585.1| aspartate racemase [Eubacterium saphenum ATCC 49989] gi|255993163|gb|EEU03252.1| aspartate racemase [Eubacterium saphenum ATCC 49989] Length = 249 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 22/196 (11%) Query: 48 VGFPYGNWEDHALKKRLMFLF------SDILDKYQPVLSVIACNTAFT------LIKDEL 95 P + + + + L + VI CNT+ + Sbjct: 54 ASMP--DRTEAIIADETDEIVYKLYRDFKFLVQSGADKIVIPCNTSHVFIKKVFAFLKGM 111 Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155 + S FL + + +G + + +T T+ + H+ Sbjct: 112 DNITGSEYFLDMIDGV--LKNLNGAGDVYLWATDGTVMSGVYEERLADVGVSLHLPEKLE 169 Query: 156 MILASRVE-EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 L +V +Y K +E K +E + + ++L CT ++ L Sbjct: 170 QELVMKVIYDYIKKGKTPPEEDIKILERKVFSGDAR---SVILGCTELSMLKK--SGLLS 224 Query: 215 WPVDWLDNSDSIARRA 230 + ++D + IA+ A Sbjct: 225 DEIRYIDPIEIIAKEA 240 >gi|306479661|emb|CBV35909.1| glutamate racemase [Helicobacter pylori] Length = 80 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 8/80 (10%) Query: 194 VIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDD 247 V++L CTH+PLI + + D+I + F Sbjct: 1 VVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPK 58 Query: 248 HALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 VEFHASGDVVWLEKQAKEWL 78 >gi|271965998|ref|YP_003340194.1| aspartate racemase [Streptosporangium roseum DSM 43021] gi|270509173|gb|ACZ87451.1| aspartate racemase [Streptosporangium roseum DSM 43021] Length = 301 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 16/178 (8%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 + L + L + CNTA + + + + A A +L+T Sbjct: 80 EALKQAGCELLAVPCNTAHAFVPRLADEA--GLELVSIIEVTADALAADGVRAAGVLATS 137 Query: 130 ATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL ++ + V+ + + + G + ++ + Sbjct: 138 GTLHAGLYADALRRRGVAVIEPDEPGQRQVTAAIGAVKSGG--VQPAHRRALAELSRSLA 195 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-------RCLLPRINT 239 + + +V ACT L++ + R P V LD + +ARR + LLPR + Sbjct: 196 DRGAERVVTACT--ELVLALDRSRVP--VPVLDPARLLARRVVGLALGAQRLLPRRHN 249 >gi|227891689|ref|ZP_04009494.1| aspartate racemase [Lactobacillus salivarius ATCC 11741] gi|227866492|gb|EEJ73913.1| aspartate racemase [Lactobacillus salivarius ATCC 11741] Length = 237 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 21/127 (16%) Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATLRRTYTSNLIH 142 CNTA DEL++ A++Q + + I++T TL I Sbjct: 84 CNTA-HYFYDELQAAVDVPVLHMPRLAVEQIKKDYPNAKRVGIVATNGTLHDGVYDKEIL 142 Query: 143 SYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKK--EIEGCFI------EKEGKRTD 193 + L E A +++ D+IK+ ++G + ++ D Sbjct: 143 D----------AGYELVKPTAEIQAKTMELIYDDIKEKDYVDGKLFYELVEDMVKDEKCD 192 Query: 194 VIVLACT 200 ++L CT Sbjct: 193 AVILGCT 199 >gi|218897190|ref|YP_002445601.1| aspartate racemase family protein [Bacillus cereus G9842] gi|218545872|gb|ACK98266.1| aspartate racemase family protein [Bacillus cereus G9842] Length = 231 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A +A + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHVADATAKAIKRKDIQKVGLLGTTYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + I + + + ++V E G + + ++ + E Sbjct: 129 MEQDFYKSRIEENNIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYKRVIEELVQ 186 Query: 190 KRTDVIVLACT 200 K I+L CT Sbjct: 187 KGAQGIILGCT 197 >gi|14590552|ref|NP_142620.1| aspartate racemase [Pyrococcus horikoshii OT3] gi|21465704|pdb|1JFL|A Chain A, Crystal Structure Determination Of Aspartate Racemase From An Archaea gi|21465705|pdb|1JFL|B Chain B, Crystal Structure Determination Of Aspartate Racemase From An Archaea gi|3257078|dbj|BAA29761.1| 228aa long hypothetical aspartate racemase [Pyrococcus horikoshii OT3] Length = 228 Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 41/130 (31%), Gaps = 5/130 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ ++ CNTA + +++R + + + + +L+T T Sbjct: 70 LEECGADFIIMPCNTAHAFV-EDIRKAIK-IPIISMIEETAKKVKELGFKKAGLLATTGT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASR-VEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + Y + R + E +K ++ + E + Sbjct: 128 IVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKAGNLKLG--RELLLKTAKILEER 185 Query: 191 RTDVIVLACT 200 + I+ CT Sbjct: 186 GAECIIAGCT 195 >gi|224372895|ref|YP_002607267.1| amino acid racemase [Nautilia profundicola AmH] gi|223588963|gb|ACM92699.1| amino acid racemase [Nautilia profundicola AmH] Length = 225 Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 5/139 (3%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+K +I NT + D ++++ ++ + A +A Sbjct: 61 AKILANAAKSLEKAGADFIMITTNTMHKVA-DYVKNSI-NLPLIDIRDATAEAVKKAGVD 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T+ + + + + +V + I +D KKE Sbjct: 119 NVLLLGTKFTMEDDFYVEYLKRKDLNVTVPNLEHRNFIHKVIFDELCLGITKDNSKKE-- 176 Query: 182 GCFIEKEGKRTDVIVLACT 200 D ++L CT Sbjct: 177 -FLKIINSYNVDGVILGCT 194 >gi|229043964|ref|ZP_04191657.1| hypothetical protein bcere0027_20050 [Bacillus cereus AH676] gi|229109665|ref|ZP_04239251.1| hypothetical protein bcere0018_19260 [Bacillus cereus Rock1-15] gi|228673706|gb|EEL28964.1| hypothetical protein bcere0018_19260 [Bacillus cereus Rock1-15] gi|228725375|gb|EEL76639.1| hypothetical protein bcere0027_20050 [Bacillus cereus AH676] Length = 230 Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKEKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + + ++ + V E I ++ E K + +++ Sbjct: 129 MEQDFYKSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKIVVQSREYYKRVIEELVQEG 188 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 189 AQGI---ILGCT 197 >gi|261344626|ref|ZP_05972270.1| putative aspartate racemase [Providencia rustigianii DSM 4541] gi|282567542|gb|EFB73077.1| putative aspartate racemase [Providencia rustigianii DSM 4541] Length = 235 Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 33/150 (22%) Query: 67 LFSDILDKYQPV---LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 L D L + + VI CNTA DEL+ + + L + A TQ I Sbjct: 63 LMEDYLQRLEVAGAECIVIPCNTA-HFWFDELKKSC-HVEILSIIEATMNEVISTQKNKI 120 Query: 124 SILSTPATLRRTYTSNLIHS-----YVSQCH--------IHLVSSMILASRVEEYACGIK 170 +L+T AT+ I I+L+ S Sbjct: 121 GLLATDATMHMGLYQQSIEDQGLICIKPDNENQKMIMKSIYLLKSGEF-----------S 169 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + ED +KK+ + F ++IVL CT Sbjct: 170 LAEDIMKKQADILF----SNGAEIIVLGCT 195 >gi|75761380|ref|ZP_00741353.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228900814|ref|ZP_04065029.1| hypothetical protein bthur0014_20160 [Bacillus thuringiensis IBL 4222] gi|74491146|gb|EAO54389.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228858740|gb|EEN03185.1| hypothetical protein bthur0014_20160 [Bacillus thuringiensis IBL 4222] Length = 231 Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A +A + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKAIKRKDIQKVGLLGTTYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMIL---ASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + + +E I + E K + ++K Sbjct: 129 MEQDFYKSSIEENNIKVIVPSEKNRKEINKVIYIELCLGKIVSQSREYYKRVIEELVQKG 188 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 189 AQGI---ILGCT 197 >gi|269960038|ref|ZP_06174415.1| hypothetical protein VME_07990 [Vibrio harveyi 1DA3] gi|269835337|gb|EEZ89419.1| hypothetical protein VME_07990 [Vibrio harveyi 1DA3] Length = 232 Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 19/171 (11%), Positives = 55/171 (32%), Gaps = 13/171 (7%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + ++ +I NT + D+++ ++ + A + + Sbjct: 63 ILSQAAKSVEAGGADFILICTNTMHKVA-DQIQQAV-NVPLVHIADATAEKLVADGIEKV 120 Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T+ + + LI + + + + V ++ +++ Sbjct: 121 GLLGTRFTMEQDFYKQRLIDKFGVDVVVPSSNDQTIVHEVIYNELCKGEVREDSRQQYLT 180 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRA 230 + + + ++L CT L V D ++ A+ A Sbjct: 181 IIDKLVEEGAEAVILGCT-------EIAMLVEPQHTEVKLYDTTEIHAKAA 224 >gi|218236145|ref|YP_002369551.1| aspartate racemase family protein [Bacillus cereus B4264] gi|218164102|gb|ACK64094.1| aspartate racemase family protein [Bacillus cereus B4264] Length = 224 Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQAIPK 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 +++L+T AT++ + I I + + + + IK E E Sbjct: 114 NA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEKA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D ++ACT Sbjct: 169 RKLWSALVVQLKDEVDTAIIACT 191 >gi|297193998|ref|ZP_06911396.1| aspartate racemase [Streptomyces pristinaespiralis ATCC 25486] gi|297152054|gb|EFH31504.1| aspartate racemase [Streptomyces pristinaespiralis ATCC 25486] Length = 229 Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 9/153 (5%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+ L +I NT + + L A +A + Sbjct: 63 ILASAARGLEAAGADLLLICTNTMHKVAGQV--EAAVRVPLLHLADATAEAVKARGLTRV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + + + L RV + + DE + + Sbjct: 121 GLLGTAFTMEQDFYRARLAGHGLEVLTPDAEGRALVHRVIYDELCLGVVRDESRARYQDV 180 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP 216 E + +VL CT L Sbjct: 181 IGELVAAGAEGVVLGCT-------EIELLIGPD 206 >gi|229828743|ref|ZP_04454812.1| hypothetical protein GCWU000342_00809 [Shuttleworthia satelles DSM 14600] gi|229793337|gb|EEP29451.1| hypothetical protein GCWU000342_00809 [Shuttleworthia satelles DSM 14600] Length = 237 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 15/146 (10%) Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 +++RL+ IL+ I CNT D L+ ++ + A Sbjct: 65 VEERLLKDC-KILETCGCSAIAIPCNT-SHYFADRLQDQL-TVPIIHMPRRTVLRLADAG 121 Query: 120 SGLISILSTPATLRRTYTSNLIH-----SYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 ++IL+T T+ + +Y ++ ++ G + Sbjct: 122 KKKVAILATDGTIVTGVYRKALEAAGIVAYEPDSQTQKKVMSLIYDEIKAGEKGNRHTFA 181 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200 I + + D +L CT Sbjct: 182 AIDRAVRE-------AGCDGAILGCT 200 >gi|306480355|emb|CBV36577.1| glutamate racemase [Helicobacter pylori] Length = 81 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 8/81 (9%) Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246 +V++L CTH+PLI H + + D+I + F Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 58 Query: 247 DHALFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 RVEFHASGDVIWLEKQAKEWL 79 >gi|300213953|gb|ADJ78369.1| Aspartate racemase [Lactobacillus salivarius CECT 5713] Length = 224 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 21/127 (16%) Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATLRRTYTSNLIH 142 CNTA DEL++ A++Q + + I++T TL I Sbjct: 71 CNTA-HYFYDELQAAVDVPVLHMPRLAVEQIKKDYPNAKRVGIVATNGTLHDGVYDKEIL 129 Query: 143 SYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKK--EIEGCFI------EKEGKRTD 193 + L E A +++ D+IK+ ++G + ++ D Sbjct: 130 D----------AGYELVKPTAEIQAKTMELIYDDIKEKDYVDGKLFYELVEDMVKDEKCD 179 Query: 194 VIVLACT 200 ++L CT Sbjct: 180 AVILGCT 186 >gi|150397172|ref|YP_001327639.1| aspartate racemase [Sinorhizobium medicae WSM419] gi|150028687|gb|ABR60804.1| aspartate racemase [Sinorhizobium medicae WSM419] Length = 239 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 50/150 (33%), Gaps = 9/150 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G W++ AL+ + + L +I NT + + + + + Sbjct: 57 GRWDEAALR---LSDVARGLVAGGADCILICTNTM--HLIADAVQRSVDVPLINIIDETA 111 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIK 170 Q S +L+T T+ + + + ++ + + L V +E G Sbjct: 112 QRLKSAGSRKPLLLATRYTMEHGFYAERMKTHGIDLMVPDAAGRTLTHNVIFDELCAGRV 171 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + + + + + D ++L CT Sbjct: 172 LDSS--RDALIALIEKAKADGADAVILGCT 199 >gi|90961008|ref|YP_534924.1| aspartate racemase [Lactobacillus salivarius UCC118] gi|301299506|ref|ZP_07205779.1| aspartate racemase [Lactobacillus salivarius ACS-116-V-Col5a] gi|90820202|gb|ABD98841.1| Aspartate racemase [Lactobacillus salivarius UCC118] gi|300852896|gb|EFK80507.1| aspartate racemase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 237 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 27/130 (20%) Query: 84 CNTAFTLIKDELRSTFPSMAFLGA----VPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 CNTA DEL++ + L V IKQ Y + + I++T TL Sbjct: 84 CNTA-HYFYDELQAAV-DVPVLHMPRLAVEQIKQ--DYPNAKRVGIVATNGTLHDGVYDK 139 Query: 140 LIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKK--EIEGCFI------EKEGK 190 I + L E A +++ D+IK+ ++G + + Sbjct: 140 EILD----------AGYELVKPTAEIQAKTMELIYDDIKEKDYVDGKLFYELVEDMVKDE 189 Query: 191 RTDVIVLACT 200 + D ++L CT Sbjct: 190 KCDAVILGCT 199 >gi|229115704|ref|ZP_04245109.1| hypothetical protein bcere0017_19970 [Bacillus cereus Rock1-3] gi|228667846|gb|EEL23283.1| hypothetical protein bcere0017_19970 [Bacillus cereus Rock1-3] Length = 232 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L K +I NT ++ ++++ ++ L + I Sbjct: 63 VLGNAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADTTAKEIKRKGIQTI 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T+ + + + I + + + L + C KI ++ + Sbjct: 121 GLLGTKYTMEQDFYKSRIEENNIKVIVPVEKNREKLNEIIYTELCLGKITSQS-REYYKR 179 Query: 183 CFIEKEGKRTDVIVLACT 200 E K I+L CT Sbjct: 180 VIEELVQKGAQGIILGCT 197 >gi|228907954|ref|ZP_04071805.1| hypothetical protein bthur0013_21180 [Bacillus thuringiensis IBL 200] gi|228851713|gb|EEM96516.1| hypothetical protein bthur0013_21180 [Bacillus thuringiensis IBL 200] Length = 230 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 49/139 (35%), Gaps = 6/139 (4%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L K +I NT ++ +++ + L A + + Sbjct: 63 VLANAAYSLQKGGADFIIICTNTMHKVV-GKIKEKI-DIPVLHIADATAKEIKRKDIQKV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIE 181 +L T T+ + + + I + + + ++ + V E G + + ++ + Sbjct: 121 GLLGTKYTMEQDFYKSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKIVSQS--REYYK 178 Query: 182 GCFIEKEGKRTDVIVLACT 200 E K I+L CT Sbjct: 179 RVIEELVQKGAQGIILGCT 197 >gi|229074908|ref|ZP_04207917.1| hypothetical protein bcere0024_19430 [Bacillus cereus Rock4-18] gi|228708245|gb|EEL60409.1| hypothetical protein bcere0024_19430 [Bacillus cereus Rock4-18] Length = 232 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L K +I NT ++ ++++ ++ L + I Sbjct: 63 VLGNAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADTTAKEIKRKGIQTI 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T+ + + + I + + + L + C KI ++ + Sbjct: 121 GLLGTKYTMEQDFYKSRIEENNIKVIVPVEKNREKLNEIIYTELCLGKITSQS-REYYKR 179 Query: 183 CFIEKEGKRTDVIVLACT 200 E K I+L CT Sbjct: 180 VIEELVQKGAQGIILGCT 197 >gi|229096725|ref|ZP_04227696.1| hypothetical protein bcere0020_19720 [Bacillus cereus Rock3-29] gi|229102827|ref|ZP_04233523.1| hypothetical protein bcere0019_19810 [Bacillus cereus Rock3-28] gi|228680612|gb|EEL34793.1| hypothetical protein bcere0019_19810 [Bacillus cereus Rock3-28] gi|228686931|gb|EEL40838.1| hypothetical protein bcere0020_19720 [Bacillus cereus Rock3-29] Length = 232 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L K +I NT ++ ++++ ++ L + I Sbjct: 63 VLGNAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADTTAKEIKRKGIQTI 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T+ + + + I + + + L + C KI ++ + Sbjct: 121 GLLGTKYTMEQDFYKSRIEENNIKVIVPVEKNREKLNEIIYTELCLGKITSQS-REYYKR 179 Query: 183 CFIEKEGKRTDVIVLACT 200 E K I+L CT Sbjct: 180 VIEELVQKGAQGIILGCT 197 >gi|306480292|emb|CBV36518.1| glutamate racemase [Helicobacter pylori] Length = 78 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 8/78 (10%) Query: 196 VLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 +L CTH+PLI H + + D+I + F Sbjct: 1 ILGCTHFPLIAHQIEGYFMGHFALSTPPLLIHSGDAIVEYLQQ--KYTLKKNAHAFPKVE 58 Query: 250 LFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 FHASGDVIWLEKQAKEWL 76 >gi|126738048|ref|ZP_01753769.1| Asp/Glu/Hydantoin racemase family protein [Roseobacter sp. SK209-2-6] gi|126720545|gb|EBA17250.1| Asp/Glu/Hydantoin racemase family protein [Roseobacter sp. SK209-2-6] Length = 248 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ +VIA NT + R +M L A A + ++ T T Sbjct: 84 LEVAGCDFAVIASNTPHARLHSITRGV--AMPVLSIYEATASAVLLAGAKKALVIGTSVT 141 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L+ S ++ + I + + E A + + ++ + Sbjct: 142 LQSPNYSQVMTEHS----IRTLGPLPEEEIAEAQAMIDEDFHGGASENARERLLQFCHRN 197 Query: 192 TD---VIVLACTHYPL 204 + ++LACT PL Sbjct: 198 AEPGTAVILACTELPL 213 >gi|296502791|ref|YP_003664491.1| aspartate racemase [Bacillus thuringiensis BMB171] gi|296323843|gb|ADH06771.1| aspartate racemase [Bacillus thuringiensis BMB171] Length = 230 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 47/131 (35%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKEKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + I + + + ++ + V E G + + ++ + E Sbjct: 129 MEQDFYKSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKTVVQS--REYYKRVIEELVQ 186 Query: 190 KRTDVIVLACT 200 + I+L CT Sbjct: 187 EGAQGIILGCT 197 >gi|209520721|ref|ZP_03269470.1| aspartate racemase [Burkholderia sp. H160] gi|209498846|gb|EDZ98952.1| aspartate racemase [Burkholderia sp. H160] Length = 232 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 45/134 (33%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L++ L ++A NT + + ++ ++ FL A + +L Sbjct: 67 AARQLERGGADLVILATNTMHRVCESIEQA--ITVPFLHIADPTGAALRAAGVERVGLLG 124 Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ +T YT L Y + R+ +D +K + Sbjct: 125 TRYTMEQTFYTGRLRERYGLDTLVPDDDERADVHRIIYDELCHGNVDDASRKVYQRVIEH 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAARGAQAVILGCT 198 >gi|228958494|ref|ZP_04120214.1| hypothetical protein bthur0005_20000 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801121|gb|EEM48018.1| hypothetical protein bthur0005_20000 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 230 Score = 49.2 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 48/131 (36%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKEKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + ++ I + + + ++ + V E G + + ++ + E Sbjct: 129 MEQDFYNSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKIVVQS--REYYKRAIEELVQ 186 Query: 190 KRTDVIVLACT 200 + I+L CT Sbjct: 187 EGAQGIILGCT 197 >gi|94971619|ref|YP_593667.1| aspartate racemase [Candidatus Koribacter versatilis Ellin345] gi|94553669|gb|ABF43593.1| Aspartate racemase [Candidatus Koribacter versatilis Ellin345] Length = 230 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 42/141 (29%), Gaps = 17/141 (12%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L++ +I NT T + + L +A T + +L Sbjct: 67 AAKRLERGGADCVLICANTMHTAAPEV--EAAVKIPLLHLCDVTAEAILRTVKKEVGLLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVE-------EYACGIKIKEDEIKKE 179 T T+ + L + + + R E E G + E K++ Sbjct: 125 TAFTMEMPFYKDRLTQKFGLEVLV-----PNDVDRAETHRIIFDELVHGRVLPES--KQK 177 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 ++ I+L CT Sbjct: 178 YREIIGRLIADGSEAIILGCT 198 >gi|305666777|ref|YP_003863064.1| Asp/Glu racemase:Aspartate racemase [Maribacter sp. HTCC2170] gi|88709001|gb|EAR01235.1| Asp/Glu racemase:Aspartate racemase [Maribacter sp. HTCC2170] Length = 231 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 62/181 (34%), Gaps = 13/181 (7%) Query: 54 NWED-HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 L + + + + VL + A NT L D ++ ++ L Sbjct: 53 EKSQWDLLNQDFAEMANKLEQAGAEVLLICA-NTM-HLCADAIKEKV-TIPLLHIADVCG 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKI 171 + + +L T T+ + +++ Y + I + V I Sbjct: 110 EEITSKGCKKVLLLGTKYTMELDFYKDILKNQYGIEVMIPSKEDREVVHDVIYTELAKGI 169 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIA 227 ++ KK+ + + E + + ++L CT PL+ +Q + +D +++ Sbjct: 170 ISEDSKKQYKDIIKKSEEEGVEAVILGCTEIPLL---IQQE-DCSIPVIDTTKIHAEAAV 225 Query: 228 R 228 + Sbjct: 226 K 226 >gi|319795600|ref|YP_004157240.1| peptidoglycan-binding lysin domain [Variovorax paradoxus EPS] gi|315598063|gb|ADU39129.1| Peptidoglycan-binding lysin domain [Variovorax paradoxus EPS] Length = 6514 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 81/240 (33%), Gaps = 27/240 (11%) Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPE-----YHFIYVADDVGFPYGNWED---- 57 P + ++ + +FDSG GG++ +++ + E + + D YG Sbjct: 4618 PDLRGVRLRLGVFDSGNGGILAAAEIKRGVEERTGARVDLVIIGDHGAGTYGELGRVGGV 4677 Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ--AA 115 A+ R + D L V+ CNTA T D+ + + + + + ++ Sbjct: 4678 TAIADRTNG-GLQVGDALGIHLMVMGCNTACTSGLDQY-ARGIGVPVVDLILSTREFHKG 4735 Query: 116 AYTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLV----SSMILASRVEEYACG-- 168 + ST T +NLI Y + V + LA V + Sbjct: 4736 LVDAGERVVAFSTEPTATLPLPGTNLIGVYR-DNEVLPVGGTDAGFDLAGIVNVFLADPM 4794 Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLA--CTHYP----LIVHVFRQLSPWPVDWLDN 222 + ++ + + + DV ++ CTHYP Q V ++ Sbjct: 4795 NPALQQRMQDAADHYADKILAAKPDVTTVSWCCTHYPELERFFAKSLAQRGRSDVKMVNP 4854 >gi|163791277|ref|ZP_02185692.1| Aspartate racemase [Carnobacterium sp. AT7] gi|159873481|gb|EDP67570.1| Aspartate racemase [Carnobacterium sp. AT7] Length = 234 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 8/127 (6%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 QP VI CNTA +EL P + + + +A + I + + TL Sbjct: 76 QPAFIVIPCNTA-HYFIEELEKATP-IPIVNMIKETVKAIPSNFNKKIGLAVSQGTLESQ 133 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK--EIEGCFIEKEGKRTD 193 + + + ++L ++ IKE I E E ++ Sbjct: 134 LYEREL--LAKGFEVI-LPDIVLQDKI-NQLIYTFIKEQAIMNLFLYEEILEEFHSMGSE 189 Query: 194 VIVLACT 200 +L CT Sbjct: 190 TTLLGCT 196 >gi|196032953|ref|ZP_03100366.1| probable amino-acid racemase [Bacillus cereus W] gi|195994382|gb|EDX58337.1| probable amino-acid racemase [Bacillus cereus W] Length = 224 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 66/173 (38%), Gaps = 17/173 (9%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V +A Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 T +++L+T AT+R + I + + + IK E + Sbjct: 114 TA-KRVALLATEATVRAEIYQDGIAKRNIDYIYYEQ----WQESINQIITYIKSGEVKEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + + + D ++ACT ++ + D++D++ +A+ Sbjct: 169 HRLWDALVLQLKDEVDTAIIACTDLNVVANE---------DFVDSAQCLAKAV 212 >gi|160899935|ref|YP_001565517.1| aspartate racemase [Delftia acidovorans SPH-1] gi|160365519|gb|ABX37132.1| aspartate racemase [Delftia acidovorans SPH-1] Length = 238 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 4/101 (3%) Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR 161 + FL + AA + +L T T+ + + + + + + R Sbjct: 107 IPFLHIADPVADAARTRGYRKLGLLGTRFTMEQPFMRERLQQQGLEVLVPQEADRAEVHR 166 Query: 162 V--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + EE G ++E ++ + + G+ +VL CT Sbjct: 167 IIYEELCTGRILEES--RRTYQRIMAQLAGQGAQAMVLGCT 205 >gi|91762966|ref|ZP_01264931.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1002] gi|91718768|gb|EAS85418.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1002] Length = 248 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K VI CNTA +D + + + I+ + ++ I +L+T T Sbjct: 84 LEKSGCKFIVIPCNTAHYWYEDLKKKIKIPIINMPKEVFIQTKKSCKKNSKIGLLATEGT 143 Query: 132 LRRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACG-IKIKEDEIKKEIEGCFIEKEG 189 L+ + YV + + + + ++ G IK+ E IK I+ I+++ Sbjct: 144 LKTEIYDKIFKKDYVLIKPLSNLQTSSVNKTIKHVKMGNIKLAEKTIKPAIK-YLIKQKC 202 Query: 190 KRTDVIVLACT 200 K+ +L CT Sbjct: 203 KKI---ILGCT 210 >gi|307545726|ref|YP_003898205.1| aspartate racemase [Halomonas elongata DSM 2581] gi|307217750|emb|CBV43020.1| aspartate racemase [Halomonas elongata DSM 2581] Length = 231 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 41/132 (31%), Gaps = 7/132 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ + +IA NT + + + + L A + + +L T T Sbjct: 71 IEAAGADMLLIATNTMHKVAPEVADA--IDIPLLHIADATGERLVADGMRRVGLLGTRFT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + L + + + RV EE G K E Sbjct: 129 MEQDFYKARLTERFGIEVLVPEEEQRQRVHRVIYEELCQGRIEPRS--KTEYLEIIESLR 186 Query: 189 GKRTDVIVLACT 200 + + ++L CT Sbjct: 187 QRGVEAVILGCT 198 >gi|226357715|ref|YP_002787454.1| aspartate racemase [Deinococcus deserti VCD115] gi|226319957|gb|ACO47950.1| putative aspartate racemase [Deinococcus deserti VCD115] Length = 243 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 67/173 (38%), Gaps = 11/173 (6%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-- 121 ++ + L V+ CNTA +D L +T ++ F+ + + AA Q G Sbjct: 63 VLAQMARGLQASGADFLVMVCNTAHAFEEDILNAT--TLPFVSLIEETRDAALREQPGLQ 120 Query: 122 LISILSTPATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L+T L + Y VS + + + + G ++ E+ Sbjct: 121 RVGLLATSTCLGAGLYQSAFAPYGVSTLALEGSALARFMDLLYQIKAGD--TGPRVRAEM 178 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 +E +V+V CT PL++ + + PV ++++D + R Sbjct: 179 RTLALELVDSGAEVLVAGCTEVPLVLDA-QDV---PVPLVNSTDVLVERTLQY 227 >gi|114563068|ref|YP_750581.1| aspartate racemase [Shewanella frigidimarina NCIMB 400] gi|114334361|gb|ABI71743.1| aspartate racemase [Shewanella frigidimarina NCIMB 400] Length = 231 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 47/136 (34%), Gaps = 7/136 (5%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + ++ +I NT + D++++ S+ L A + + +L Sbjct: 67 AAKAVEAGGADFLLICTNTMHKVA-DDIQAQI-SIPILHIADATAEVLLADGISKVGLLG 124 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIEGCF 184 T T+ + + I + LV S + + + + + ++ G Sbjct: 125 TRFTMEQDFYKQRISDNYP-IEV-LVPSPHEQTLIHDVIYQELCLGTINPQSRQCYLGII 182 Query: 185 IEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 183 DKLYEQGAEAVILGCT 198 >gi|306479789|emb|CBV36033.1| glutamate racemase [Helicobacter pylori] Length = 78 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 8/78 (10%) Query: 196 VLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 +L CTH+PLI P P + + D+I + + F Sbjct: 1 ILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYTLKNNACAFPKVE 58 Query: 250 LFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 FHASGDVIWLEKQAKEWL 76 >gi|30020311|ref|NP_831942.1| aspartate racemase [Bacillus cereus ATCC 14579] gi|29895862|gb|AAP09143.1| Aspartate racemase [Bacillus cereus ATCC 14579] Length = 230 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 52/140 (37%), Gaps = 8/140 (5%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L K +I NT ++ ++++ + FL A + + Sbjct: 63 ILGNVAYSLQKGGADFIIICTNTMHKVV-EKIKEKI-DIPFLHIADATAKEIKRKDIQKV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180 +L T T+ + + + I + + + ++ + V E I ++ E K + Sbjct: 121 GLLGTKYTMEQDFYKSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKIVVQSREYYKRV 180 Query: 181 EGCFIEKEGKRTDVIVLACT 200 +++ + +L CT Sbjct: 181 IEELVQEGAQGI---ILGCT 197 >gi|149193789|ref|ZP_01870887.1| aspartate racemase [Caminibacter mediatlanticus TB-2] gi|149135742|gb|EDM24220.1| aspartate racemase [Caminibacter mediatlanticus TB-2] Length = 226 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 57/207 (27%), Gaps = 48/207 (23%) Query: 23 IGG------LIVLQ----KMRFLMPEYH----FIYVADDVGFPYGNWEDHALKK------ 62 IGG L + ++ + H +Y D + K Sbjct: 7 IGGMSWESSLTYYKIINEEINKKLGNLHSGKIILYSVD----------FEEIAKLQRENN 56 Query: 63 -----RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 ++ + L+ +I NT + D R+ ++ + + + Sbjct: 57 WEKSSEILANVAKNLENAGADFVLICTNTMHKVADDVKRA--INIPLIDIRDVVIEEIKK 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KE 173 + +L T T+ + + + + +V + + + Sbjct: 115 RNLKKVLLLGTKFTMEDKFYKKYLVKKGIDIIVPSLKERDFIHKVIFNELCLGVIKTTSK 174 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACT 200 +E K I D ++L CT Sbjct: 175 EEFLKIINSY-------NVDGVILGCT 194 >gi|227111786|ref|ZP_03825442.1| aspartate racemase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 232 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 11/126 (8%) Query: 85 NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144 NT ++ DEL+ ++ + + + + A +L T T+ + Sbjct: 84 NTP-HIVFDELQKRA-TVPLVSIIESTRDDALRLGVTKAGLLGTRFTMEEDFFKKPFRE- 140 Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-----EKEGKRTDVIVLAC 199 S + + +A ++E ++++ IK E F+ K+ K D ++L C Sbjct: 141 -SGITVITPDTATMA-LIDEKIT-TELEQGVIKPETRADFVNIVQRMKKEKGIDAVILGC 197 Query: 200 THYPLI 205 T PL+ Sbjct: 198 TELPLL 203 >gi|229144817|ref|ZP_04273214.1| hypothetical protein bcere0012_19770 [Bacillus cereus BDRD-ST24] gi|228638539|gb|EEK94972.1| hypothetical protein bcere0012_19770 [Bacillus cereus BDRD-ST24] Length = 230 Score = 49.2 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKEKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI---KKEIEGCFIEKE 188 + + + + I + + V S I +V E + ++ + E Sbjct: 129 MEQDFYKSRIEEH--DIKVI-VPSGINREKVNEVIYTELCLGKIVVQSREYYKRVIEELV 185 Query: 189 GKRTDVIVLACT 200 + I+L CT Sbjct: 186 QEGAQGIILGCT 197 >gi|253687565|ref|YP_003016755.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754143|gb|ACT12219.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 235 Score = 48.8 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 3/130 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + VI NT + D R+ + L A + + +L T T Sbjct: 73 LRQAGADAIVICTNTMHKVADDVERAC--QLPLLHIADATGASLKQHGLKKVGLLGTRYT 130 Query: 132 LRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + I + + + + +R+ + D ++ + E + Sbjct: 131 MEQDFYRQRIQERFGVEVVVPDHEGKEIVNRIIYDELCLGNINDVSRQAYRDIIQQLEQQ 190 Query: 191 RTDVIVLACT 200 + I+L CT Sbjct: 191 GAEGIILGCT 200 >gi|288957076|ref|YP_003447417.1| aspartate racemase [Azospirillum sp. B510] gi|288909384|dbj|BAI70873.1| aspartate racemase [Azospirillum sp. B510] Length = 244 Score = 48.8 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 56/156 (35%), Gaps = 20/156 (12%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+W R + D L++ L V NT +++ + ++ F+ Sbjct: 66 GDWTGAE---RYLAGKVDALERAGADLVVCVSNTMHRVVEPIMAGR--AIPFIHIADPTG 120 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 +A + +L T AT+R L+ + + + L+ + ++ I Sbjct: 121 EAIVKAGLTRVGLLGTAATMRSEM---LVERFRDRFGVELL----VPDEADQAIVDRIIF 173 Query: 173 EDEIKKEIEG-----CFI---EKEGKRTDVIVLACT 200 ++ +++++ + + ++L CT Sbjct: 174 DELVRRDLRPDSKAEYLRIVGDLRRRGAGGVILGCT 209 >gi|255930405|ref|XP_002556762.1| Pc06g01570 [Penicillium chrysogenum Wisconsin 54-1255] gi|211581375|emb|CAP79150.1| Pc06g01570 [Penicillium chrysogenum Wisconsin 54-1255] Length = 226 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 52/151 (34%), Gaps = 9/151 (5%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 K ++I+ NT D + + ++ L + + +L T T+ Sbjct: 69 AKAGAEFAIISANTPHVAFNDIVAQS--NIPVLSILDVAANHCKRQGYKNVGVLGTTWTV 126 Query: 133 RRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + ++ I+ + + + E + + ++ R Sbjct: 127 KNGLYNGPLQKRDMAAVYVSDTDQAIVMNAIVQELINGIFLETTTSELVR--VAKELATR 184 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 D I+L CT PL++ + V+ +D Sbjct: 185 CDAIILGCTELPLVLTE-QNC---GVEVVDT 211 >gi|167647143|ref|YP_001684806.1| aspartate racemase [Caulobacter sp. K31] gi|167349573|gb|ABZ72308.1| aspartate racemase [Caulobacter sp. K31] Length = 220 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 18/170 (10%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L + IACNTA D++R++ + + + AA + + Sbjct: 59 VLAQMAVGLRDAGAQVLAIACNTAHAYA-DQVRAS--GLPLVDLIETAGLAAKADGAQRV 115 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI----KKE 179 +L T L L S I V ++ +VE A +IK ++ ++ Sbjct: 116 GVLGTGGALA------LYRRTFSHLGIEAV-TLDDHEQVEFMALLYRIKHGDVGPASRET 168 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + GK V+V CT PL++ S V ++D ++++ARR Sbjct: 169 MAALAHRLVGKGAQVVVAGCTEVPLVMS----ASDLTVPFIDATEALARR 214 >gi|295676959|ref|YP_003605483.1| aspartate racemase [Burkholderia sp. CCGE1002] gi|295436802|gb|ADG15972.1| aspartate racemase [Burkholderia sp. CCGE1002] Length = 231 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L++ L ++A NT + + + ++ FL A + +L Sbjct: 67 AARQLERGGADLVILATNTM-HRVYESIEQAI-TVPFLHIADPTGAALRAAGVERVGLLG 124 Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ +T YT L Y + R+ +D +K + Sbjct: 125 TRYTMEQTFYTGRLRERYGLDTLVPDDDERTDVHRIIYDELCHGNVDDASRKVYQRVIEH 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAARGAQAVILGCT 198 >gi|282858060|ref|ZP_06267256.1| aspartate racemase [Pyramidobacter piscolens W5455] gi|282584107|gb|EFB89479.1| aspartate racemase [Pyramidobacter piscolens W5455] Length = 235 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 44/157 (28%), Gaps = 19/157 (12%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G AL++ L L L + CNTA + D R+ + + Sbjct: 62 GESPAAALRQGLDTLCGW-----GADLLAVPCNTA-HIFIDPFRAQLRAPLIHIVEATVA 115 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHS-----YVSQCHIHLVSSMILASRVEEYAC 167 A G I++T AT+ + + +++ + Sbjct: 116 DAVKAAPDGC-WIIATGATMASGIYEKEAARRGYRFFAPSEEVRELAT----KAIVHVKA 170 Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204 G + +EI ACT PL Sbjct: 171 GELKAGGAVMEEIAARLWAVRRAPIVT---ACTELPL 204 >gi|162659852|gb|EDQ48142.1| predicted protein [Physcomitrella patens subsp. patens] Length = 194 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 4/101 (3%) Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR 161 + FL + AA + +L T T+ + + + + + + R Sbjct: 63 IPFLHIADPVADAARTRGYRKLGLLGTRFTMEQPFMRERLQQQGLEVLVPQEADRAEVHR 122 Query: 162 V--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + EE G ++E ++ + + G+ +VL CT Sbjct: 123 IIYEELCTGRILEES--RRTYQRIMAQLAGQGAQAMVLGCT 161 >gi|15965834|ref|NP_386187.1| putative aspartate racemase protein [Sinorhizobium meliloti 1021] gi|307309591|ref|ZP_07589244.1| aspartate racemase [Sinorhizobium meliloti BL225C] gi|307321868|ref|ZP_07601253.1| aspartate racemase [Sinorhizobium meliloti AK83] gi|15075103|emb|CAC46660.1| Putative aspartate racemase [Sinorhizobium meliloti 1021] gi|306892479|gb|EFN23280.1| aspartate racemase [Sinorhizobium meliloti AK83] gi|306899926|gb|EFN30548.1| aspartate racemase [Sinorhizobium meliloti BL225C] Length = 234 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 2/133 (1%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L +I NT + + + + + S +L+ Sbjct: 69 VARGLVAGGADCILICSNTM--HLIADAVHASVDVPLINIIDETALRLKAAGSRKPLLLA 126 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + + + + ++ + L V + + + G + Sbjct: 127 TRYTMEQGFYAERMKTHDIDLMVPDADGRTLTHNVIFDELCAGQVLNASRSAVIGLIEKA 186 Query: 188 EGKRTDVIVLACT 200 + + D ++L CT Sbjct: 187 KAEGADAVILGCT 199 >gi|229147323|ref|ZP_04275673.1| amino-acid racemase [Bacillus cereus BDRD-ST24] gi|228636155|gb|EEK92635.1| amino-acid racemase [Bacillus cereus BDRD-ST24] Length = 225 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 70/176 (39%), Gaps = 16/176 (9%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V Q+ Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQSIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + +++L+T AT++ + I I + + + + IK E E Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVENA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 +++ + + D ++ACT + + +++D+S +A+ + Sbjct: 169 RKLWSALVVQLKDEVDTAIIACT------DL--NVVAASENFVDSSQCLAKAVVRM 216 >gi|91792825|ref|YP_562476.1| aspartate racemase [Shewanella denitrificans OS217] gi|91714827|gb|ABE54753.1| aspartate racemase [Shewanella denitrificans OS217] Length = 230 Score = 48.8 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 19/167 (11%) Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYT 118 + +R + +D+ P +I CN D ++ S+ Q Sbjct: 62 ILQRELQYLNDL----CPSCILI-CNNTLHQAFDAIKDKLNLSVPVFHMADLTAQHVYQK 116 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 + + T T+ Y SN I ++ + + L R+ + I + + Sbjct: 117 GHKKVLLTGTQYTMESGYYSNKIAAHGIEVIV-----PALEERIHIQSMQQSIAKGHATE 171 Query: 179 EIEGCFIEKEGK--RTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDN 222 + F + D ++ ACT PL I QL + +D Sbjct: 172 QFTAAFEKILANYLDCDAVITACTELPLVITPTITQL-----EIVDP 213 >gi|186470782|ref|YP_001862100.1| aspartate racemase [Burkholderia phymatum STM815] gi|184197091|gb|ACC75054.1| aspartate racemase [Burkholderia phymatum STM815] Length = 233 Score = 48.8 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 12/172 (6%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + D+L++ L I CN+A + S P + A A Sbjct: 62 ALLAGIDMLNRNSVGLIAIPCNSAHHWYAQICAHSAAPVLNIAEICVAAVPPTA----KR 117 Query: 123 ISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++L+T L + + ++A ++ G D +E Sbjct: 118 VAVLATGGALVSGFYQRALAERDIEPVTPDETVQPLVAVCIDAVKSG---DLDAAAMHLE 174 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 + + +LACT PL ++++ + +D+S +AR Sbjct: 175 TALAMLVKQGVTMALLACTEIPLAA---QRIAAPALPLIDSSLELARATVKY 223 >gi|116696357|ref|YP_841933.1| aspartate racemase [Ralstonia eutropha H16] gi|113530856|emb|CAJ97203.1| aspartate racemase [Ralstonia eutropha H16] Length = 240 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 56/165 (33%), Gaps = 16/165 (9%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 ++L++ Q L VI CNT +L S + L + I AA +G ++IL+T Sbjct: 75 ELLNRNQVGLVVIPCNT-SHHWYAQL-SAHSAAPILH-IARICVAALPADTGSVAILATR 131 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 L + + + + + D+ + + Sbjct: 132 GALASGIYQAALDARGIAAVVPPEPVQLQVDACIRAVKAGAL--DQAGEALGSALARIAA 189 Query: 190 KRTDVIVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRA 230 ++ CT R L+ P+ +D+++ +AR Sbjct: 190 LGVGAAIMGCT-------EIPVAARGLAAPPLMLVDSTNELARAT 227 >gi|169827813|ref|YP_001697971.1| hypothetical protein Bsph_2278 [Lysinibacillus sphaericus C3-41] gi|168992301|gb|ACA39841.1| Hypothetical ygeA protein [Lysinibacillus sphaericus C3-41] Length = 233 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ VI NT ++ E+ ++ L A Q +++L T T Sbjct: 72 LERAGADFIVICTNTMHKVV--EVMEEAITIPILHIADATAQQIKKAGLQKVALLGTMYT 129 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + + Y + S + +R+ EE G I K E Sbjct: 130 MEQEFYRSRVEGYGIAVIVPERHSRMEVNRIIYEELCLGSIIPNS--KSYYIQVINELVE 187 Query: 190 KRTDVIVLACT 200 ++L CT Sbjct: 188 AGAQGVILGCT 198 >gi|194366566|ref|YP_002029176.1| aspartate racemase [Stenotrophomonas maltophilia R551-3] gi|194349370|gb|ACF52493.1| aspartate racemase [Stenotrophomonas maltophilia R551-3] Length = 230 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L L +I NT L D + + P + L QA + + +L Sbjct: 67 AARRLQAGGADLLLICTNTMHKLA-DRIEAVCP-LPLLHIADPTAQAIVQSGMRRVGLLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + + L + + + + + D ++ Sbjct: 125 TAFTMEQDFYRGRLQDRFGLEVLVPDADDRRSVHDIIYQELIAGVVSDRSRQVYVDVIAR 184 Query: 187 KEGKRTDVIVLACT 200 + + I+L CT Sbjct: 185 LVERGAEAIILGCT 198 >gi|321312993|ref|YP_004205280.1| aspartate racemase [Bacillus subtilis BSn5] gi|320019267|gb|ADV94253.1| aspartate racemase [Bacillus subtilis BSn5] Length = 208 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 63/189 (33%), Gaps = 14/189 (7%) Query: 52 YGNWEDH--ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109 Y + +KK ++ L+K + CNTA + +E++ Sbjct: 30 YADRPIDHDEMKKAIIDGAVK-LEKTGVDFIALPCNTA-HIYYEEIQQALSVPMLHIVEE 87 Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 IK+ + + +L T T++ ++ + + + + Sbjct: 88 TIKEIPHPAKKAV--VLGTEPTIQSAIYQKVLKANGQEVIHKDHWQQAVNQLIAAIKQPN 145 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 ++ + + E+ + D+I+ ACT ++ + P +D+S +A+ Sbjct: 146 HMQH---TQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEIP----IIDSSACLAKS 198 Query: 230 -ARCLLPRI 237 L Sbjct: 199 TVSTYLAYQ 207 >gi|306480050|emb|CBV36284.1| glutamate racemase [Helicobacter pylori] Length = 78 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 21/78 (26%), Gaps = 8/78 (10%) Query: 196 VLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHA 249 +L CTH+PLI + + D+I + F Sbjct: 1 ILGCTHFPLIAQKIEGYFMDHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPKVE 58 Query: 250 LFLSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 FHASGDVVWLEKQAKEWL 76 >gi|212223817|ref|YP_002307053.1| aspartate racemase [Thermococcus onnurineus NA1] gi|212008774|gb|ACJ16156.1| aspartate racemase [Thermococcus onnurineus NA1] Length = 229 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 52/185 (28%), Gaps = 21/185 (11%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G L + L+ + ++ CNTA + ++ K Sbjct: 58 GEDPRPELVESARK-----LESWGADFIIMPCNTA-HFFAESIQRKISIPLVSMVEETAK 111 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIK 170 + + +L+T T++ + Q + + L E G Sbjct: 112 R-IEEMGLKKVGLLATDGTIKGLVYHRALLDRGIQIAVPIKKDQELVMKGIYEGVKAGNL 170 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIAR 228 E+ + ++ I+ CT V L P V +D D IA Sbjct: 171 ELGRELLLRVARRLEKRSEG----IIAGCT------EVSVALKPEDLSVPLIDPLDVIAE 220 Query: 229 RARCL 233 A L Sbjct: 221 MAVRL 225 >gi|167637972|ref|ZP_02396250.1| aspartate racemase family protein [Bacillus anthracis str. A0193] gi|177651115|ref|ZP_02933946.1| aspartate racemase family protein [Bacillus anthracis str. A0174] gi|254736866|ref|ZP_05194572.1| aspartate racemase family protein [Bacillus anthracis str. Western North America USA6153] gi|167513789|gb|EDR89157.1| aspartate racemase family protein [Bacillus anthracis str. A0193] gi|172082941|gb|EDT68003.1| aspartate racemase family protein [Bacillus anthracis str. A0174] Length = 224 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 9/121 (7%) Query: 82 IA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 IA CNTA L +EL+ + S+ L V +A T +++L T AT++ + Sbjct: 78 IAMSCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPETA-KRVALLETEATVQAGIYQD 134 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 I I + + + IK E E +E+ + + D ++AC Sbjct: 135 GIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEARELWSALVLQLKDEVDTAIIAC 190 Query: 200 T 200 T Sbjct: 191 T 191 >gi|257077294|ref|ZP_05571655.1| aspartate racemase [Ferroplasma acidarmanus fer1] Length = 230 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 24/154 (15%) Query: 53 GNWED-HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI 111 G A+ K + D L++ I CNTA + E ++ + L V Sbjct: 56 GTKSPVDAINKGI-----DFLERNGITTIAIPCNTA-HIWFSEFKA---GVNLLNMVDLT 106 Query: 112 KQAAAYTQSGLISILSTPATLRRT-YTSNL----IHSYVSQCHIHLVSSMILASRVEEYA 166 +A + L+T AT++ Y NL I + + + ++ ++ L E Sbjct: 107 VKAILDSGYKHPGFLATTATIKSRLYIKNLEEAGISAIIPEQEDTVMQAVKLVKLGEI-- 164 Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 K ++ E E +D I++ACT Sbjct: 165 -------SRAKATLKPVVKELEDNGSDSIIMACT 191 >gi|4001718|dbj|BAA35091.1| aspartate racemase [Thermococcus sp. KS-8] Length = 232 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 57/192 (29%), Gaps = 35/192 (18%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA--------FTLIKDELRSTFPSMAF 104 G L L++ ++ CNTA ++I Sbjct: 58 GPDPRPELITSARK-----LEECGADFIIMPCNTAHFFAGTIQSSVIY----------PL 102 Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 + + + + +L+T T++ + + L + Sbjct: 103 VSMIEETAKRIEEMGLRKVGLLATDGTIKGMVYHRALLKRGIHIAVPNKKDQGLVMKA-- 160 Query: 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLD 221 G+K E+ +E+ +K +R++ I+ CT + V +D Sbjct: 161 IYEGVKAGNLELGRELLLKVAKKLERRSEGIIAGCT-------EVSVVLKPGDLTVPLID 213 Query: 222 NSDSIARRARCL 233 D IA RA L Sbjct: 214 PMDVIAERAVKL 225 >gi|119468433|ref|ZP_01611524.1| hypothetical protein ATW7_10318 [Alteromonadales bacterium TW-7] gi|119447941|gb|EAW29206.1| hypothetical protein ATW7_10318 [Alteromonadales bacterium TW-7] Length = 231 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 3/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +L+ + ++ +I NT + D + S S+ L A + + Sbjct: 61 AKLLTEAAKSVEAGGADFLLICTNTMHKVA-DHIASNI-SIPILHIADATADQLKHDKIT 118 Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L T T+ + + L + + I + + I DE + E Sbjct: 119 RVGLLGTQFTMEQNFYKRRLTDRHNIEVLIPEPNERARVHDIIYNQLCQGIINDEARAEF 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 K IVL CT Sbjct: 179 INIIERMFDKGAQAIVLGCT 198 >gi|154174088|ref|YP_001409162.1| aspartate racemase [Campylobacter curvus 525.92] gi|112802179|gb|EAT99523.1| aspartate racemase [Campylobacter curvus 525.92] Length = 230 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 12/157 (7%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + L K L+ + ++ A NT ++ DEL + P + + V A + Sbjct: 54 ERKFDELVKYLLNGIDSLHAAGAQFGAISA-NTP-HIVFDELAARSP-IPLISIVEATLK 110 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 A + I +L T T++ ++ + I + + E +++ Sbjct: 111 QARREKLSKIGLLGTYTTMKESFFKT--PFLKNGIEIFT-PNGDEMKFIGEKIA-TELEL 166 Query: 174 DEIKKEIEGCFI-----EKEGKRTDVIVLACTHYPLI 205 + + K+ + F+ ++ + +VL CT P I Sbjct: 167 NIVNKQTQNKFLTIIENMRKIYGIESVVLGCTELPFI 203 >gi|30264822|ref|NP_847199.1| aspartate racemase family protein [Bacillus anthracis str. Ames] gi|47530307|ref|YP_021656.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49187641|ref|YP_030894.1| aspartate racemase family protein [Bacillus anthracis str. Sterne] gi|65322123|ref|ZP_00395082.1| COG1794: Aspartate racemase [Bacillus anthracis str. A2012] gi|165869772|ref|ZP_02214430.1| aspartate racemase family protein [Bacillus anthracis str. A0488] gi|167633792|ref|ZP_02392115.1| aspartate racemase family protein [Bacillus anthracis str. A0442] gi|170685960|ref|ZP_02877183.1| aspartate racemase family protein [Bacillus anthracis str. A0465] gi|170705467|ref|ZP_02895931.1| aspartate racemase family protein [Bacillus anthracis str. A0389] gi|190568295|ref|ZP_03021203.1| aspartate racemase family protein [Bacillus anthracis Tsiankovskii-I] gi|227817547|ref|YP_002817556.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684] gi|229603579|ref|YP_002869030.1| aspartate racemase family protein [Bacillus anthracis str. A0248] gi|254687563|ref|ZP_05151419.1| aspartate racemase family protein [Bacillus anthracis str. CNEVA-9066] gi|254725128|ref|ZP_05186911.1| aspartate racemase family protein [Bacillus anthracis str. A1055] gi|254741901|ref|ZP_05199588.1| aspartate racemase family protein [Bacillus anthracis str. Kruger B] gi|254754501|ref|ZP_05206536.1| aspartate racemase family protein [Bacillus anthracis str. Vollum] gi|254757334|ref|ZP_05209361.1| aspartate racemase family protein [Bacillus anthracis str. Australia 94] gi|30259497|gb|AAP28685.1| aspartate racemase family protein [Bacillus anthracis str. Ames] gi|47505455|gb|AAT34131.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181568|gb|AAT56944.1| aspartate racemase family protein [Bacillus anthracis str. Sterne] gi|164714601|gb|EDR20120.1| aspartate racemase family protein [Bacillus anthracis str. A0488] gi|167530593|gb|EDR93295.1| aspartate racemase family protein [Bacillus anthracis str. A0442] gi|170129592|gb|EDS98455.1| aspartate racemase family protein [Bacillus anthracis str. A0389] gi|170670424|gb|EDT21164.1| aspartate racemase family protein [Bacillus anthracis str. A0465] gi|190560551|gb|EDV14528.1| aspartate racemase family protein [Bacillus anthracis Tsiankovskii-I] gi|227002401|gb|ACP12144.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684] gi|229267987|gb|ACQ49624.1| aspartate racemase family protein [Bacillus anthracis str. A0248] Length = 224 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 61/154 (39%), Gaps = 18/154 (11%) Query: 82 IA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 IA CNTA L +EL+ + S+ L V +A T +++L T AT++ + Sbjct: 78 IAMSCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPETA-KRVALLETEATVQAGIYQD 134 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 I I + + + IK E E +E+ + + D ++AC Sbjct: 135 GIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEARELWSALVLQLKDEVDTAIIAC 190 Query: 200 THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 T ++ D++D++ +A+ + Sbjct: 191 TDLNVVASE---------DFVDSAQCLAKAVVRM 215 >gi|172063017|ref|YP_001810668.1| aspartate racemase [Burkholderia ambifaria MC40-6] gi|171995534|gb|ACB66452.1| aspartate racemase [Burkholderia ambifaria MC40-6] Length = 233 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 8/168 (4%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L++ + I CN+A LR + L V A A +++L+T Sbjct: 69 LLNRCGVDVIAIPCNSA-HHWYAPLRE-CSAAPVLHIVDASVAAVPA-GVRRVAVLATGG 125 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 TL + + + + + V++ + K+ + + + Sbjct: 126 TLVSGFYQAALRARGFEPVMPAVTAQRDIAACIAAVKAGKVDASV--RRLSRALATLARR 183 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 V V+ CT P+ R P +D++ +AR Sbjct: 184 DVGVAVMGCTEIPIAARALRDA---PFALIDSTQELARATVAYAAERG 228 >gi|148974135|ref|ZP_01811668.1| aspartate racemase [Vibrionales bacterium SWAT-3] gi|145965832|gb|EDK31080.1| aspartate racemase [Vibrionales bacterium SWAT-3] Length = 231 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 45/131 (34%), Gaps = 5/131 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++K +I NT ++ E+ ++ L Q + +L T T Sbjct: 71 VEKGGADFILICTNTMHKVV-PEIEEK-TTIPILHIADTTAQKLLDQGVKKVGLLGTAFT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + L + I S + + + C +IKE+ + + Sbjct: 129 MEQDFYKGRLTEKFDIDVVIPDESDRKQVHNIIYQELCRGEIKEES-RTIYSQIIEKLSQ 187 Query: 190 KRTDVIVLACT 200 + + IVL CT Sbjct: 188 QGAEAIVLGCT 198 >gi|228939356|ref|ZP_04101947.1| hypothetical protein bthur0008_20160 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972234|ref|ZP_04132848.1| hypothetical protein bthur0003_20100 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978849|ref|ZP_04139217.1| hypothetical protein bthur0002_20510 [Bacillus thuringiensis Bt407] gi|228780871|gb|EEM29081.1| hypothetical protein bthur0002_20510 [Bacillus thuringiensis Bt407] gi|228787484|gb|EEM35449.1| hypothetical protein bthur0003_20100 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820316|gb|EEM66350.1| hypothetical protein bthur0008_20160 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939928|gb|AEA15824.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43] Length = 230 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 49/139 (35%), Gaps = 6/139 (4%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L K +I NT ++ +++ + L A + + Sbjct: 63 VLANAAYSLQKGGADFIIICTNTMHKVV-GKIKEKI-DIPVLHIADATAKEIKRKDIQKV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIE 181 +L T T+ + + + I + + + + ++V E G + + ++ + Sbjct: 121 GLLGTKYTMEQDFYKSRIEEHDIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYK 178 Query: 182 GCFIEKEGKRTDVIVLACT 200 E K I+L CT Sbjct: 179 RVIEELVQKGAQGIILGCT 197 >gi|50120467|ref|YP_049634.1| putative aspartate racemase [Pectobacterium atrosepticum SCRI1043] gi|49610993|emb|CAG74438.1| putative aspartate racemase [Pectobacterium atrosepticum SCRI1043] Length = 238 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 47/157 (29%), Gaps = 37/157 (23%) Query: 64 LMFLFSDILDKYQPVLSVIACNTA---------FTLIKDELRSTFPSMAFLGAVPAIKQA 114 + L++ V+ CNTA + + A A Sbjct: 64 TLLHAVQQLNRLSVSHIVVPCNTAHHWFDALSETSHA-----------PLVHIADATLHA 112 Query: 115 AAY---TQS--GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS------SMILASRVE 163 T+ I +++T TL + + +Q + V + + Sbjct: 113 ITQPVETKKIPQKIGLIATHGTLNAGWYQ---QRFAAQLGVETVVPDEQEMTTLFVPGCY 169 Query: 164 EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 G + +++ +E+ +R +VLACT Sbjct: 170 AVKRGELQHGGRLLEQLAARLVERGAER---LVLACT 203 >gi|257885954|ref|ZP_05665607.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257821810|gb|EEV48940.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] Length = 213 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 12/165 (7%) Query: 72 LDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L + L ++ CN+ I D L + P A + I +L+ Sbjct: 59 LQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKII---TPFQVYADLAQKHERIGVLTANG 115 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 S L+ + + ++ V+++ VE I E + Sbjct: 116 QGAAGIESVLVQHHST-IRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDSMSFFMKN 171 Query: 191 RTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + I++ CTH+P + + + ++ D++ + + +L Sbjct: 172 QVEAILIGCTHFPYFLTEYQSR---TRIPCINPDDALIEKVKSIL 213 >gi|257897472|ref|ZP_05677125.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|257834037|gb|EEV60458.1| conserved hypothetical protein [Enterococcus faecium Com12] Length = 213 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 12/165 (7%) Query: 72 LDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L + L ++ CN+ I D L + P A + I +L+ Sbjct: 59 LQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKII---TPFQVYADLAQKHERIGVLTANG 115 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 S L+ + + ++ V+++ VE I E + Sbjct: 116 QGAAGIESVLVQHHST-IRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDSMSFFMKN 171 Query: 191 RTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + I++ CTH+P + + + ++ D++ + + +L Sbjct: 172 QVEAILIGCTHFPYFLTEYQSR---TRIPCINPDDALIEKVKSIL 213 >gi|299770779|ref|YP_003732805.1| aspartate racemase [Acinetobacter sp. DR1] gi|298700867|gb|ADI91432.1| aspartate racemase [Acinetobacter sp. DR1] Length = 241 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 70 DILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LIS 124 IL++ I CNTA +L+ P ++Q QSG + Sbjct: 74 KILERSGVSKIAIPCNTAHFWHS-----DLQQHTPIEILNMVEITVQQILKNYQSGDKVG 128 Query: 125 ILSTPATLRRTYTSNLIHS------YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 IL+T L + + S I V K + + Sbjct: 129 ILATKGALSTQLYQHELSKHDIPFVINSDEEIEQ----EFMPAVYAVKRNESAKAGIVFQ 184 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 E+ I + I+LACT Sbjct: 185 ELSQRLI---DQGAGSIILACT 203 >gi|227550146|ref|ZP_03980195.1| glutamate racemase [Enterococcus faecium TX1330] gi|227180713|gb|EEI61685.1| glutamate racemase [Enterococcus faecium TX1330] Length = 219 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 12/165 (7%) Query: 72 LDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L + L ++ CN+ I D L + P A + I +L+ Sbjct: 65 LQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKII---TPFQVYADLAQKHERIGVLTANG 121 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 S L+ + + ++ V+++ VE I E + Sbjct: 122 QGAAGIESVLVQHHST-IRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDSMSFFMKN 177 Query: 191 RTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + I++ CTH+P + + + ++ D++ + + +L Sbjct: 178 QVEAILIGCTHFPYFLTEYQSR---TRIPCINPDDALIEKVKSIL 219 >gi|261492724|ref|ZP_05989272.1| putative aspartate racemase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495661|ref|ZP_05992107.1| putative aspartate racemase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308768|gb|EEY10025.1| putative aspartate racemase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311577|gb|EEY12732.1| putative aspartate racemase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 231 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 64/199 (32%), Gaps = 37/199 (18%) Query: 46 DDVGFPYGNWEDHALKKRLMFLFS-------------DILDKYQPVLSVIACNTAFTLIK 92 D P + R ++ + + L+ +IACNTA Sbjct: 33 DQAHIPLLISSIPDIPDRTRYILANGENPAPVMEKYIEGLESAGATCIIIACNTA-HYWF 91 Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152 + L++ + L + + + +L+T ATL + + Sbjct: 92 EHLKAK-SQVEMLSMIDCVVDEVLKCGKRRVGLLATDATLAVELYKKQL-----EAQGLT 145 Query: 153 VSSMILASRVEEYACGI-----KIKEDEIKKEIEGCFIEKEG---KRTDVIVLACTHYP- 203 E + +K E++K E +++ +VI+L CT P Sbjct: 146 FICPT-----ENGQKAVMDSIYLLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPI 200 Query: 204 LIVHVFRQLSPWPVDWLDN 222 ++ + P+ ++D+ Sbjct: 201 ILAQEIER---EPMRYVDS 216 >gi|322376070|ref|ZP_08050580.1| putative aspartate racemase [Streptococcus sp. C300] gi|321279020|gb|EFX56063.1| putative aspartate racemase [Streptococcus sp. C300] Length = 230 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 50/138 (36%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ + L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQEKI-TIPILHIAQATAQALLADGIQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + + +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGNIKESSKQTYLA 179 Query: 183 CFIEKEGKRTDVIVLACT 200 E + + ++L CT Sbjct: 180 IIDELKKAGAEAVILGCT 197 >gi|293573127|ref|ZP_06684065.1| putative glutamate racemase [Enterococcus faecium E980] gi|291606796|gb|EFF36180.1| putative glutamate racemase [Enterococcus faecium E980] Length = 216 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 12/165 (7%) Query: 72 LDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L + L ++ CN+ I D L + P A + I +L+ Sbjct: 62 LQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKII---TPFQVYADLAQKHERIGVLTANG 118 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 S L+ + + ++ V+++ VE I E + Sbjct: 119 QGAAGIESVLVQHHST-IRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDSMSFFMKN 174 Query: 191 RTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + + I++ CTH+P + + + ++ D++ + + +L Sbjct: 175 QVEAILIGCTHFPYFLTEYQSR---TRIPCINPDDALIEKVKSIL 216 >gi|311111893|ref|YP_003983115.1| aspartate racemase [Rothia dentocariosa ATCC 17931] gi|310943387|gb|ADP39681.1| aspartate racemase [Rothia dentocariosa ATCC 17931] Length = 234 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 4/130 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ L ++A NT + R+T ++ L V A A + +L T T Sbjct: 71 LEGAGAQLLLVATNTMHKVAPAIERAT--TVPLLHVVDATATAIQRQGLQRVGLLGTTFT 128 Query: 132 LRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + + Q + + + E C ++ E E + ++ + + Sbjct: 129 MSDGFYTERMAVQGIQTIVPTESEQTDINRIIFEQLCLGRV-EPEAVQYLQQVITGLKEQ 187 Query: 191 RTDVIVLACT 200 ++L CT Sbjct: 188 GAQGVILGCT 197 >gi|70730197|ref|YP_259936.1| aspartate racemase [Pseudomonas fluorescens Pf-5] gi|68344496|gb|AAY92102.1| aspartate racemase [Pseudomonas fluorescens Pf-5] Length = 230 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 46/139 (33%), Gaps = 2/139 (1%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + L+ V+ NT + + F+ + QAA + Sbjct: 61 AAILVEAARRLEAGGAECVVLCTNTMHKVAGQI--EAAIGVPFVHIADPVVQAAQAAGTL 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T+ + + + + + + R+ + + + ++ + Sbjct: 119 SVGLLGTAFTMEQAFLKGRLEDQGLKVLVPDAAQRQAVHRIIYEELCVGVVSESSRRLYQ 178 Query: 182 GCFIEKEGKRTDVIVLACT 200 + + + I+L CT Sbjct: 179 HVIDGLQARGAEAIILGCT 197 >gi|211639250|emb|CAR94649.1| hypothetical protein [Escherichia coli] Length = 229 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 27/180 (15%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VI CNTA EL+ + L V I +L+T AT Sbjct: 61 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNAT 118 Query: 132 LRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 L I S + + G ++ E Sbjct: 119 LYMGLYQKGIESLGFTCVSPDAD----GQKKVMESIYSLKAGNIAHAQKLMNEQAEILFS 174 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPV-----DWLDNSDSIARR-ARCLLPRINTH 240 + +++VL CT + V ++D++ S+ R + R+ H Sbjct: 175 R---GAEILVLGCT-------EIPDILAQAVKEQPSRYIDSAASLVRAGIKWYENRVGKH 224 >gi|254522508|ref|ZP_05134563.1| aspartate racemase [Stenotrophomonas sp. SKA14] gi|219720099|gb|EED38624.1| aspartate racemase [Stenotrophomonas sp. SKA14] Length = 230 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 41/134 (30%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L L +I NT L D + + P + L A + + +L Sbjct: 67 AARRLQAGGADLLLICTNTMHKL-TDRIEAACP-LPLLHIADPTANAIVQAGARRVGLLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + + L + + + + + ++ ++ Sbjct: 125 TAFTMEQDFYRGRLQERFGLEVLVPDAEDRRSVHDIIYQELIAGVVSEQSRRVYAAVIAR 184 Query: 187 KEGKRTDVIVLACT 200 + + I+L CT Sbjct: 185 LIARGAEAIILGCT 198 >gi|262395398|ref|YP_003287251.1| aspartate racemase [Vibrio sp. Ex25] gi|262338992|gb|ACY52786.1| aspartate racemase [Vibrio sp. Ex25] Length = 231 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 46/155 (29%), Gaps = 13/155 (8%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++K +I NT + ++ ++ ++ L A + + +L T T Sbjct: 71 IEKGGADFILICTNTMHKVA-PQIEASI-NIPILHIADATAELLREKGVQKVGLLGTQFT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + L Y + + ++E + + + + Sbjct: 129 MEQDFYKGRLSDLYGLDVITPAQDDRSIVHNIIYKELCQGEIKEESRTIYLQIIEKLKEQ 188 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222 + ++L CT L V LD Sbjct: 189 GAEAVILGCT-------EIALLVNQSHTDVTLLDT 216 >gi|313674468|ref|YP_004052464.1| aspartate racemase [Marivirga tractuosa DSM 4126] gi|312941166|gb|ADR20356.1| aspartate racemase [Marivirga tractuosa DSM 4126] Length = 229 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 59/159 (37%), Gaps = 4/159 (2%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 ++K+ + + + + + + A NT +I D ++ + L A +AA Sbjct: 53 KEKIQKKYLEVCKKLQEAGADGIIICA-NTP-HMIYDYVQPKIDA-PILHIGIATGRAAQ 109 Query: 117 YTQSGLISILSTPATLRRTYTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + +L T++ + S+++ + + I + + I ++ Sbjct: 110 DADLKTLGLLGNKPTMKGKFISSVLENDFGMKVIIPEGDDLDQSHHYVSKELTQGIFSEQ 169 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 K E + K D I+L CT P+++ + P Sbjct: 170 AKAFYLDQIKELKRKGADGIILGCTELPILLKGIKADLP 208 >gi|118475485|ref|YP_892551.1| aspartate racemase [Campylobacter fetus subsp. fetus 82-40] gi|118414711|gb|ABK83131.1| aspartate racemase [Campylobacter fetus subsp. fetus 82-40] Length = 229 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 65/203 (32%), Gaps = 37/203 (18%) Query: 23 IGG------LIVLQ----KMRFLMPEYH----FIYVADDVGFPYGNWEDHALKKR----- 63 IGG L + ++R + H +Y + + H ++K Sbjct: 7 IGGMSWESTLTYYKVLNEEIRDRLGGLHSAKCIVY----------SLDFHEIEKFQSQNE 56 Query: 64 ------LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 ++ + L+K +I NT + D + ++ + F+ QA Sbjct: 57 WQKSGKVLLDAALNLEKAGAECVMICTNTMHKVA-DMITASLK-IPFIHIADVTAQALKQ 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 S +L T T+ ++ + I + + S + V I + K Sbjct: 115 NGSKKALLLGTKYTMTESFYKDKISKNSIEVVVPNKSDTDFINSVIFNELCIGNIKQSSK 174 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 E E + D ++L CT Sbjct: 175 IEFIKIINESKKLGVDSVILGCT 197 >gi|170702582|ref|ZP_02893456.1| aspartate racemase [Burkholderia ambifaria IOP40-10] gi|170132516|gb|EDT00970.1| aspartate racemase [Burkholderia ambifaria IOP40-10] Length = 265 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/167 (10%), Positives = 49/167 (29%), Gaps = 14/167 (8%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ ++++ +I NT D L+ ++ + + A + Sbjct: 62 ILAQAAEVIQHSGASKLLICSNTTSRTC-DRLQQRL-NLEVINIIDATAAHIHRCGYKRV 119 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR-----VEEYACGIKIKEDEIKK 178 +L T + R++ + + + + R + I + Sbjct: 120 GLLGTRYVMERSFYRERLE--AAGIEVV---TPTPVDRRVIHNIIYQELCHGIFSPLSSE 174 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 + + ++L CT PL + +D+ D+ Sbjct: 175 MFMSVVKQFARLGVEAVILGCTEIPLAFPALSSH--GGIAVVDSIDA 219 >gi|158421727|ref|YP_001523019.1| aspartate racemase [Azorhizobium caulinodans ORS 571] gi|158328616|dbj|BAF86101.1| aspartate racemase [Azorhizobium caulinodans ORS 571] Length = 232 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 41/136 (30%), Gaps = 7/136 (5%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L++ + +I NT + + + + L + +L Sbjct: 69 AARRLERGGADVLLICSNTMHRMAGEVAGAV--GVPLLHIADPTAARVKAAGLTRVGLLG 126 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCF 184 T T+ + + L + + + R+ EE G E ++ Sbjct: 127 TAFTMEQDFYKGRLAARHGLDVLVPEAEDRAVVHRIIYEELVQGRI--EAASREAYRAVI 184 Query: 185 IEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 185 ARLVARGAEAVILGCT 200 >gi|242280633|ref|YP_002992762.1| aspartate racemase [Desulfovibrio salexigens DSM 2638] gi|242123527|gb|ACS81223.1| aspartate racemase [Desulfovibrio salexigens DSM 2638] Length = 229 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 15/159 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ +IA NT E+++ ++ L AI A + + +L T T Sbjct: 71 VEAGGADALIIATNTM-HKAAPEVQAAV-NIPLLHMADAIAAGAEKCGASKLGLLGTAFT 128 Query: 132 LRRTYTSN-LIHSYVSQCHIHLVSSMILASR-VEEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + S L Y + + + R + + C K+ ++ + ++ E Sbjct: 129 MEQDFLSRPLKEKYGLEVIVPDCDGRSMVHRTIFDELCCGKLMDNTREGYVK-IIEEMAV 187 Query: 190 KRTDVIVLACTHYPLIVHVFRQLS-PWPVD--WLDNSDS 225 + + IVL CT L P V +D ++ Sbjct: 188 QGAEAIVLGCT-------EIGLLVKPEDVSVPLIDTVEA 219 >gi|188991875|ref|YP_001903885.1| hypothetical protein xccb100_2480 [Xanthomonas campestris pv. campestris str. B100] gi|167733635|emb|CAP51840.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 233 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 39/142 (27%), Gaps = 11/142 (7%) Query: 63 RLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + M + L L V+ NT A + L L A A Sbjct: 66 QAMATAARALQAGGADLIVLCTNTMHCVADAITAATL-------PLLHIADATADALVAA 118 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 + +L T T+ + + + + + + RV + + + + Sbjct: 119 GILCVGLLGTRFTMEQPFYRERLEARGLDVLVPPAEARAQLHRVIYDELCQDVIKPKSRD 178 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 179 YFRQVMADLGQHGAQAIILGCT 200 >gi|149188687|ref|ZP_01866979.1| Aspartate racemase [Vibrio shilonii AK1] gi|148837597|gb|EDL54542.1| Aspartate racemase [Vibrio shilonii AK1] Length = 231 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 42/140 (30%), Gaps = 3/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 R + + ++ +I NT + + + S+ L A + Y Sbjct: 61 ARCLSESAKCIEAAGADCLLICTNTMHKVSSEI--ESVISIPLLHIADATAERLTYDGIT 118 Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L T T+ +++ L Y + + L V D ++ Sbjct: 119 KVGLLGTAFTMEQSFYKGRLEQKYDIEVVVPNQEQRALVHEVIYNELVKGEVRDISRQGY 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 179 LTIIEDLRSNGAQAIILGCT 198 >gi|333026103|ref|ZP_08454167.1| putative aspartate racemase [Streptomyces sp. Tu6071] gi|332745955|gb|EGJ76396.1| putative aspartate racemase [Streptomyces sp. Tu6071] Length = 232 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 42/138 (30%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +++ + L L +I NT + + L A A Sbjct: 62 QVLADAARSLRAAGADLLLICTNTMHKVAGQV--EAAVDVPLLHLADATASAVRTAGLRR 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + + + + L RV + I +E + Sbjct: 120 VGLLGTAFTMEQDFYRDRVAGHGLEVLVPGADDRALVHRVIYEELCLGIIREESRAAYGE 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + ++L CT Sbjct: 180 VIGRLVAAGAEGVILGCT 197 >gi|306828496|ref|ZP_07461691.1| aspartate racemase [Streptococcus mitis ATCC 6249] gi|304429295|gb|EFM32380.1| aspartate racemase [Streptococcus mitis ATCC 6249] Length = 230 Score = 48.0 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 49/138 (35%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADVVQRLEQAGADFIVICTNTMHKVA-PQIQEKI-TIPILHIAQATAQALLADGIQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + + +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGNIKESSKQTYLA 179 Query: 183 CFIEKEGKRTDVIVLACT 200 E + + ++L CT Sbjct: 180 IIDELKKAGAEAVILGCT 197 >gi|229491591|ref|ZP_04385412.1| aspartate racemase [Rhodococcus erythropolis SK121] gi|229321272|gb|EEN87072.1| aspartate racemase [Rhodococcus erythropolis SK121] Length = 265 Score = 48.0 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 44/171 (25%), Gaps = 14/171 (8%) Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPATLRRTYTSNL 140 I CNTA + S + + + +L+T T+R Sbjct: 101 IPCNTAHAF-LPAISSQLGHPVVHMIDEVARHIRTLSPAVTSVGLLATTGTVRTGLYQQW 159 Query: 141 IHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + Y + + L + ++ K + + V+V C Sbjct: 160 LSEYSIDVLVPGPAIQDELVMPAIRAIKSGNVGDETTDKLVRAADL-LVESGAQVVVAGC 218 Query: 200 THYPLIVHVFRQLSPWPVD---WLDNSDSIARRARCLLPRINTHQTRVFDD 247 T P +D + +AR + H + V Sbjct: 219 T-------EIPLGLPADATTCQIIDPATILARALLRRVADARRHPSMVVSG 262 >gi|296330339|ref|ZP_06872820.1| aspartate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676056|ref|YP_003867728.1| aspartate racemase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152607|gb|EFG93475.1| aspartate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414300|gb|ADM39419.1| aspartate racemase [Bacillus subtilis subsp. spizizenii str. W23] Length = 227 Score = 48.0 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 14/187 (7%) Query: 52 YGNWEDH--ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109 Y + +K+ ++ L+K + CNTA + +E++ Sbjct: 49 YADRPIDHGEMKRAIIDGAVK-LEKTGVDFIALPCNTA-HVYYEEIQQVLSVPLLHIIEE 106 Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 IK+ + G+ +L T +T++ + + + + + A Sbjct: 107 TIKEIPHSAKKGV--VLGTDSTIQSAIYQKGLKANGQEVVHKDHWQHSVNQLI---AAIK 161 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 + + + + E+ + D+I+ ACT ++ + P +D+SD +A+ Sbjct: 162 QPNHTQHTQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEIP----IIDSSDCLAKS 217 Query: 230 -ARCLLP 235 L Sbjct: 218 TVSTYLA 224 >gi|225574214|ref|ZP_03782824.1| hypothetical protein RUMHYD_02278 [Blautia hydrogenotrophica DSM 10507] gi|225038582|gb|EEG48828.1| hypothetical protein RUMHYD_02278 [Blautia hydrogenotrophica DSM 10507] Length = 237 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 42/134 (31%), Gaps = 13/134 (9%) Query: 72 LDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 L + V++CNTA +++ + + L + + + +L+ Sbjct: 75 LQGMGADVLVMSCNTAHYFYDSIV------PYFDIPLLHMIRETAKHLKAQEIQKAGLLA 128 Query: 128 TPATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T TL + + + + + + D + E + Sbjct: 129 TSGTLNCGVYREAMKREGIELLTPDGEDQEAVMGMIYQGVKAGRTDLD--TRRFERAMEK 186 Query: 187 KEGKRTDVIVLACT 200 + +V++L CT Sbjct: 187 LLERGAEVLILGCT 200 >gi|304436557|ref|ZP_07396527.1| aspartate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370427|gb|EFM24082.1| aspartate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 255 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 66/212 (31%), Gaps = 41/212 (19%) Query: 14 NSILIFDSGIGGLI---------VLQK-MRFLMPEYH----FIYVADDVGFPYGNWEDHA 59 +I + IGG+ V+ + ++ + H +Y D Sbjct: 27 KTIGL----IGGMSWESTVTYYQVINETIKKQLGGLHSAKCILYSVD----------FDE 72 Query: 60 LKKR-----------LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108 ++K ++ + L++ VI NT + + R + L Sbjct: 73 IEKYQASGEWDKSADVLSEAAQALERAGADYIVICTNTMHKVAPEIGRRIH--IPILHIA 130 Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168 + +L T T+++ + N++ + I + + + +R+ Y Sbjct: 131 DMTAVQLKKHGIRKVGLLGTKYTMQQDFYKNILIEQGIEVVIPNDAGVDIVNRIIYYELC 190 Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + ++ K E I+L CT Sbjct: 191 LGKILEKSKAAYLDIIHELARNGAQGIILGCT 222 >gi|269122589|ref|YP_003310766.1| aspartate racemase [Sebaldella termitidis ATCC 33386] gi|268616467|gb|ACZ10835.1| aspartate racemase [Sebaldella termitidis ATCC 33386] Length = 231 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 14/178 (7%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 L + L+ + + L++ C NT + DE+ + L +A Sbjct: 58 DELTEMLVDAGTRLKKAGADFLAI--CTNTMHKVA-DEVAEK-TGLKVLHIADVTAEAII 113 Query: 117 YTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 ++ +L T T+ + L Y + I RV I + + Sbjct: 114 QKNKNIVGLLGTDFTMSEDFYKKRLNDKYNIEVMIPEKMERERVHRVIYDELCCGIVKSQ 173 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARR 229 K E + K + ++L CT P+++ + L + D+ +D+I + Sbjct: 174 SKAEFITIINNLKDKGAEGVILGCTEIPMLIEQ-KDL---DIRVFDSMKLHADAIVKE 227 >gi|228991217|ref|ZP_04151175.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442] gi|228768441|gb|EEM17046.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442] Length = 243 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+K VI NT + ++ S+ L A + Sbjct: 66 VLGEAAYSLEKAGADFIVICTNTM-HKVISNIKDKV-SIPILHIADATAMEIKKQGIRSV 123 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + I + I + L +R+ + + + Sbjct: 124 GLLGTKYTMEQDFYKSRIEEKGMRVMIPNETDRELVNRIIYNELCLGKVNQTSRDSYKEI 183 Query: 184 FIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 184 INRFVQNGVEGIILGCT 200 >gi|221315719|ref|ZP_03597524.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|143291|gb|AAA22641.1| amino acid racemase [Bacillus subtilis] Length = 230 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 62/189 (32%), Gaps = 14/189 (7%) Query: 52 YGNWEDH--ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109 Y + +KK ++ L+K + CNTA + +E++ Sbjct: 52 YADRPIDHDEMKKAIIDGAVK-LEKTGVDFIALPCNTA-HVYYEEIQQALSVPMLHIVEE 109 Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 IK+ + + +L T T++ ++ + + + Sbjct: 110 TIKEIPHPAKKAV--VLGTEPTIQSAIYQKVLKGNGQEVIHKDHWQQAVNQLIAAIKQPN 167 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 ++ + + E+ + D+I+ ACT ++ + P +D+S +A+ Sbjct: 168 HMQH---TQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEIP----IIDSSACLAKS 220 Query: 230 -ARCLLPRI 237 L Sbjct: 221 TVSTYLAYQ 229 >gi|299536870|ref|ZP_07050177.1| hypothetical protein BFZC1_12648 [Lysinibacillus fusiformis ZC1] gi|298727694|gb|EFI68262.1| hypothetical protein BFZC1_12648 [Lysinibacillus fusiformis ZC1] Length = 232 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 47/137 (34%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L++ L +I NT +I ++ ++ L A + I Sbjct: 63 VLAQAAQALERAGAELIIICTNTMHKVI--DVIEPAITIPILHIADATAKQIKEAGLQKI 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++L T T+ + + + S+ + + + + +R+ + K Sbjct: 121 ALLGTKYTMEQAFYKARVESFGIEVIVPDSNDRMEVNRIIYDELCLGTIVPASKTYYSQV 180 Query: 184 FIEKEGKRTDVIVLACT 200 E ++L CT Sbjct: 181 IEELVHAGAQGVILGCT 197 >gi|117618212|ref|YP_858060.1| aspartate racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559619|gb|ABK36567.1| aspartate racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 230 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/149 (12%), Positives = 42/149 (28%), Gaps = 6/149 (4%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+W RL+ + + +I NT + + + L A Sbjct: 55 GDWPA---TARLLAAEAQAIQAGGADFLLIGTNTMHKVAPEI--EAAIDIPLLHIADATA 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 + + +L T T+ + + L + + + + R+ + Sbjct: 110 RQLQADGIQKVGLLGTRFTMEQDFYKGRLQDKFGLEVLVPGEAQRERVHRIIYDELCLGD 169 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 D + E ++L CT Sbjct: 170 IRDASRAEYLAIISALADAGAQAVILGCT 198 >gi|16080496|ref|NP_391323.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168] gi|221311392|ref|ZP_03593239.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168] gi|221320634|ref|ZP_03601928.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324919|ref|ZP_03606213.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. SMY] gi|226693554|sp|P32960|RACX_BACSU RecName: Full=Probable amino-acid racemase gi|1945684|emb|CAB08017.1| amino acid racemase [Bacillus subtilis] gi|2635956|emb|CAB15448.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168] Length = 227 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 62/189 (32%), Gaps = 14/189 (7%) Query: 52 YGNWEDH--ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109 Y + +KK ++ L+K + CNTA + +E++ Sbjct: 49 YADRPIDHDEMKKAIIDGAVK-LEKTGVDFIALPCNTA-HVYYEEIQQALSVPMLHIVEE 106 Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 IK+ + + +L T T++ ++ + + + Sbjct: 107 TIKEIPHPAKKAV--VLGTEPTIQSAIYQKVLKGNGQEVIHKDHWQQAVNQLIAAIKQPN 164 Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229 ++ + + E+ + D+I+ ACT ++ + P +D+S +A+ Sbjct: 165 HMQH---TQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEIP----IIDSSACLAKS 217 Query: 230 -ARCLLPRI 237 L Sbjct: 218 TVSTYLAYQ 226 >gi|327460111|gb|EGF06450.1| aspartate racemase [Streptococcus sanguinis SK1] Length = 230 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ + L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADVAKRLEQAGADFIVICTNTMHKVA-PQIQEQI-AIPILHIAQATAQALLADGIQR 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + + +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLA 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 180 VIDDLKKAGAEAVILGCT 197 >gi|254166829|ref|ZP_04873683.1| aspartate racemase subfamily [Aciduliprofundum boonei T469] gi|289596545|ref|YP_003483241.1| aspartate racemase [Aciduliprofundum boonei T469] gi|197624439|gb|EDY37000.1| aspartate racemase subfamily [Aciduliprofundum boonei T469] gi|289534332|gb|ADD08679.1| aspartate racemase [Aciduliprofundum boonei T469] Length = 225 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 52/145 (35%), Gaps = 13/145 (8%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 ++ + L+ + ++ NT ++ D L + + + A+ + A Sbjct: 57 REIYLLEIIKALEHAGAEIIALSANTP-HIVFDSLAKK-TNAKMISIIDALAEEAKNKGY 114 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDE 175 + ++ T T+ + + + + + ++ E + G+ ++ Sbjct: 115 KKLLLMGTKTTMTSGFYKRKLEEHGFEVIVPE----EYVDEIDRIIFQELSHGVLKSKNR 170 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 + +E +K+ + D +L CT Sbjct: 171 LINIVESY--KKKYEDLDAAILGCT 193 >gi|329295701|ref|ZP_08253037.1| aspartate racemase [Plautia stali symbiont] Length = 154 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 33/100 (33%), Gaps = 1/100 (1%) Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILAS 160 + L A Q + +L+T T+ + + L Y + + + Sbjct: 20 IPLLHIADATAQRIRQAGVKRVGLLATAFTMEQEFYKGRLEQQYDIEVLVPDATGRKTVH 79 Query: 161 RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + + + +E + + + + + I+L CT Sbjct: 80 DIIYQELCLGVIREESRAQYRDIIAQLVAQGAEAIILGCT 119 >gi|57168765|ref|ZP_00367896.1| aspartate racemase [Campylobacter coli RM2228] gi|57019812|gb|EAL56495.1| aspartate racemase [Campylobacter coli RM2228] Length = 221 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 55/149 (36%), Gaps = 7/149 (4%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G WE +++ + L+ +IA NT I D+++ + + + Sbjct: 46 GEWEKA---AQILGECAKKLELGGADFILIATNTM-HKIFDQIQKNIK-IPLIHIAQSTA 100 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKI 171 + I +L T T+ + N + + + L+ + C ++ Sbjct: 101 KILKQQNIHTIGLLGTQYTMMEDFYKNALKKENINTITPNQSDMQELSDIIFNELCKGQM 160 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 KE+ +K ++ + + + IVL CT Sbjct: 161 KENSKEKYLK-IIQKLKDEGAQGIVLGCT 188 >gi|218234586|ref|YP_002366922.1| aspartate racemase family protein [Bacillus cereus B4264] gi|229150447|ref|ZP_04278663.1| hypothetical protein bcere0011_19980 [Bacillus cereus m1550] gi|218162543|gb|ACK62535.1| aspartate racemase family protein [Bacillus cereus B4264] gi|228632940|gb|EEK89553.1| hypothetical protein bcere0011_19980 [Bacillus cereus m1550] Length = 230 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + + ++ + V E I ++ E K + +++ Sbjct: 129 MEQDFYKSRIEEHDIKIIVPSGTNREKVNEVIYTELCLGKIVVQSREYYKRVIEELVQEG 188 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 189 AQGI---ILGCT 197 >gi|260753107|ref|YP_003226000.1| aspartate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552470|gb|ACV75416.1| aspartate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 229 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 5/130 (3%) Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V+ C NT + + + ++ + V +A +L+T T+ + ++ Sbjct: 79 VLICTNTM--HLVADAVAEISAVPLINIVDETAKALKKDGRKRPLLLATRYTMEHGFYTD 136 Query: 140 LIHSYVSQCHIHLVSSMILASRV-EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 + + V + C ++KE + ++ + + D ++L Sbjct: 137 RMKNQGLDVITPEDEDRGFVHDVIFDELCQGEVKESSRQGYLK-IIEKARAEGVDSVILG 195 Query: 199 CTHYPLIVHV 208 CT PL++ Sbjct: 196 CTEIPLLIKQ 205 >gi|170694718|ref|ZP_02885869.1| aspartate racemase [Burkholderia graminis C4D1M] gi|170140349|gb|EDT08526.1| aspartate racemase [Burkholderia graminis C4D1M] Length = 232 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L++ L ++A NT + + + + FL A + +L Sbjct: 67 AARQLERGGAGLVMLATNTM-HRVYESI-ERAIHVPFLHIADPTGNALRAAGVERVGLLG 124 Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + YT L Y + + + R+ + E + +G Sbjct: 125 TRYTMEQAFYTGRLRERYGLETLVPEEAQRADVHRIIYDELCHGNVKSESRAIYQGVIES 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAARGAQAVILGCT 198 >gi|51245772|ref|YP_065656.1| hypothetical protein DP1920 [Desulfotalea psychrophila LSv54] gi|50876809|emb|CAG36649.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 240 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 64/182 (35%), Gaps = 10/182 (5%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 GNW++ A+ + + +++ +I NT + E+ + S+ L A Sbjct: 60 GNWQETAVI---LANAAQLVEAGGADFLLICTNTMHKVA-PEIEAEI-SIPLLHIADATA 114 Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 + +L T T+ + L+ + + + + + I Sbjct: 115 NKLLADGIKKVGLLGTRFTMEEDFYKSRLVDKFGIEVVVPDTDDRTIVHNIIYDELCRGI 174 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 + +++ + + ++L CT I + +Q+ PV D ++ A +A Sbjct: 175 INPQSREQYISIVSGLHEQGAEAVILGCT---EIALLIQQV-HTPVPLYDTTEIHAAQAV 230 Query: 232 CL 233 L Sbjct: 231 QL 232 >gi|56551267|ref|YP_162106.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4] gi|241760925|ref|ZP_04759014.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|5880350|gb|AAD54635.1|AF081588_2 aspartate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|11095428|gb|AAG29868.1|AF313764_11 aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4] gi|56542841|gb|AAV88995.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4] gi|241374544|gb|EER64005.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 229 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 5/130 (3%) Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V+ C NT + + + ++ + V +A +L+T T+ + ++ Sbjct: 79 VLICTNTM--HLVADAVAEISAVPLINIVDETAKALKKDGRKRPLLLATRYTMEHGFYTD 136 Query: 140 LIHSYVSQCHIHLVSSMILASRV-EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 + + V + C ++KE + ++ + + D ++L Sbjct: 137 RMKNQGLDVITPEDEDRGFVHDVIFDELCQGEVKESSRQGYLK-IIEKARAEGVDSVILG 195 Query: 199 CTHYPLIVHV 208 CT PL++ Sbjct: 196 CTEIPLLIKQ 205 >gi|323350873|ref|ZP_08086531.1| aspartate racemase [Streptococcus sanguinis VMC66] gi|322122855|gb|EFX94561.1| aspartate racemase [Streptococcus sanguinis VMC66] Length = 230 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 50/138 (36%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ + L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQEQI-TIPILHIAQATAQALLADGIQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + + +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGNIKESSKQAYLT 179 Query: 183 CFIEKEGKRTDVIVLACT 200 E + + ++L CT Sbjct: 180 IIDELKKAGAEAVILGCT 197 >gi|322418614|ref|YP_004197837.1| aspartate racemase [Geobacter sp. M18] gi|320125001|gb|ADW12561.1| aspartate racemase [Geobacter sp. M18] Length = 235 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 17/153 (11%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 L+ L K ++I NT + +E+++ P + + V A A Sbjct: 61 YLLVAKIKALQKAGADFAIITANTP-HAVFNEVQAKSP-IPLISIVLATCDKAKELGVKK 118 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSM--------ILASRVEEYACGIKIKED 174 + +L T T+ + + + + +V L + +E IK+D Sbjct: 119 VGLLGTMFTMEENFFA---PPFAAAGISVVVPCASEQQYIHDKLMTEIELGI----IKDD 171 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 K I+ + ++ D I+L CT PLI+ Sbjct: 172 TRKGLIDIIERLVQQEQVDAIILGCTELPLILK 204 >gi|209543142|ref|YP_002275371.1| aspartate racemase [Gluconacetobacter diazotrophicus PAl 5] gi|209530819|gb|ACI50756.1| aspartate racemase [Gluconacetobacter diazotrophicus PAl 5] Length = 230 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 44/132 (33%), Gaps = 7/132 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + +I NT E + L A +A +L+T T Sbjct: 71 LKRSGAEALLICSNTM--HCLHEAIEQAAEIPALHIADATGEALQRAGCKHPVLLATRFT 128 Query: 132 LRRT-YTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKE 188 + R YT L + I + I R+ EE GI DE ++ + Sbjct: 129 MEREFYTKRLRDLFGITARIPDGDARIGIHRIIYEELCRGII--RDESREHYRNAVRRMQ 186 Query: 189 GKRTDVIVLACT 200 + D ++L CT Sbjct: 187 TEGADSVILGCT 198 >gi|56552054|ref|YP_162893.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543628|gb|AAV89782.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4] Length = 232 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 58/155 (37%), Gaps = 8/155 (5%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIA--CNTAFTLIKDELRSTFPSMAFLGAVPAI 111 + + L LM ++++ VIA NT ++ D+L+ + + V A Sbjct: 54 DKDYTKLTTYLMHGVNNLIAAGAD---VIALTGNTP-HIVFDDLQKQ-SDVPLISIVEAT 108 Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 + +L T T+ + LI + +S +A++++ Sbjct: 109 CDEVKRQNITKVGLLGTRFTMEADFFKKPLIANGMSVITPQPKEIDYIANKIDSELEKGI 168 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 ++ + + I ++ + I+L CT PL+ Sbjct: 169 FSQNTLSEFISIISRMRDSDGIEAIILGCTELPLL 203 >gi|227329729|ref|ZP_03833753.1| putative aspartate/glutamate racemase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 236 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 9/159 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + VI NT + D R+ + L A + + +L T T Sbjct: 73 LRQAGAEAIVICTNTMHKVADDVERAC--QLPLLHIADATGTSLKQHGLKKVGLLGTRYT 130 Query: 132 LRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + I + + + +R+ + D ++ + E + Sbjct: 131 MEQDFYRQRIQERFGVEVMVPDHEGKEAVNRIIYDELCLGNINDASRQIYRDIIQQLEQQ 190 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS--DSIA 227 + I+L CT PL++ + V D S +IA Sbjct: 191 GAEGIILGCTEIPLLISA-QDA---KVPLFDTSRLHAIA 225 >gi|282852139|ref|ZP_06261496.1| conserved domain protein [Lactobacillus gasseri 224-1] gi|282556703|gb|EFB62308.1| conserved domain protein [Lactobacillus gasseri 224-1] Length = 38 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 8/29 (27%) Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQK 31 +DN P I + DSG+GGL VL+K Sbjct: 18 MDNRP--------IGVLDSGLGGLTVLKK 38 >gi|332364902|gb|EGJ42670.1| aspartate racemase [Streptococcus sanguinis SK355] Length = 230 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 47/133 (35%), Gaps = 2/133 (1%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L++ VI NT + +++ ++ L A QA + +L Sbjct: 67 IAQRLEQAGADFIVICTNTMHKIA-PQIQEKI-TIPILHIAQATAQALLADGIQKVGLLG 124 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + + + + I + + +R+ + ++ K+ + Sbjct: 125 TKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKENSKQTYLAVIDDL 184 Query: 188 EGKRTDVIVLACT 200 + + ++L CT Sbjct: 185 KKAGAEAVILGCT 197 >gi|227513566|ref|ZP_03943615.1| aspartate racemase [Lactobacillus buchneri ATCC 11577] gi|227083439|gb|EEI18751.1| aspartate racemase [Lactobacillus buchneri ATCC 11577] Length = 242 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 7/130 (5%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS-GLISILSTPAT 131 + P VI CNTA D+L++ S+ L +K+ S + +++T T Sbjct: 74 QLDPDFFVIPCNTA-HYSFDDLQA-LTSVPILHMPRETVKEIKHDVPSAKRVGLIATRGT 131 Query: 132 LRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 L I ++ + + + ++ +I + K Sbjct: 132 LHDGIYDQEIRHAGYDLVKPDEKTANQTMELIYDDIKEKNQVDGDLYHQILSTMVNK--F 189 Query: 191 RTDVIVLACT 200 DV++L CT Sbjct: 190 SCDVVILGCT 199 >gi|305432494|ref|ZP_07401656.1| aspartate racemase [Campylobacter coli JV20] gi|169640255|gb|ACA61178.1| aspartate racemase [Campylobacter coli] gi|304444533|gb|EFM37184.1| aspartate racemase [Campylobacter coli JV20] Length = 230 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 55/149 (36%), Gaps = 7/149 (4%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G WE +++ + L+ +IA NT I D+++ + + + Sbjct: 55 GEWEKA---AQILGECAKKLELGGADFILIATNTM-HKIFDQIQKNIK-IPLIHIAQSTA 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKI 171 + I +L T T+ + N + + + L+ + C ++ Sbjct: 110 KILKQQNIHTIGLLGTQYTMMEDFYKNALKKENINTITPNQSDMQELSDIIFNELCKGQM 169 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 KE+ +K ++ + + + IVL CT Sbjct: 170 KENSKEKYLK-IIQKLKDEGAQGIVLGCT 197 >gi|227510557|ref|ZP_03940606.1| aspartate racemase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190209|gb|EEI70276.1| aspartate racemase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 242 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 7/130 (5%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS-GLISILSTPAT 131 + P VI CNTA D+L++ S+ L +K S + +++T T Sbjct: 74 QLDPDFFVIPCNTA-HYSFDDLQA-LTSVPILHMPRETVKDIKHDVPSAKRVGLIATRGT 131 Query: 132 LRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 L I ++ + + + ++ +I + K Sbjct: 132 LHDGIYDREIRHAGYDLVKPDEKTANQTMELIYDDIKEKNQVDGDLYHQILSTMVNK--F 189 Query: 191 RTDVIVLACT 200 DV++L CT Sbjct: 190 SCDVVILGCT 199 >gi|226308962|ref|YP_002768922.1| aspartate racemase [Rhodococcus erythropolis PR4] gi|226188079|dbj|BAH36183.1| probable aspartate racemase [Rhodococcus erythropolis PR4] Length = 243 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 43/155 (27%), Gaps = 16/155 (10%) Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPATLRRTYTSN 139 I CNTA + S + + + + + + +L+T T+R Sbjct: 82 IPCNTAHAF-LPAISSQL-GLPVVHMIDEVARHIRTLSPAVTSVGLLATTGTVRTGLYQQ 139 Query: 140 LIHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 + Y + + L + ++ K + + V+V Sbjct: 140 WLSEYSIDVLVPGPAIQDELVMPAIRAIKSGNVGDETTDKLVRAADL-LVESGAQVVVAG 198 Query: 199 CTHYPLIVHVFRQLSPWPVD---WLDNSDSIARRA 230 CT P +D + +AR Sbjct: 199 CT-------EIPLGLPADATTCQIIDPATILARAL 226 >gi|327468006|gb|EGF13496.1| aspartate racemase [Streptococcus sanguinis SK330] Length = 230 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ + L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADVAKRLEQAGADFIVICTNTMHKVA-PQIQEQI-AIPILHIAQATAQALLADGIQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + + +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLA 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 180 VIDDLKKAGAEAVILGCT 197 >gi|227114857|ref|ZP_03828513.1| putative aspartate racemase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 238 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 15/142 (10%) Query: 68 FSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQS-G 121 L++ V+ CNTA L ++ S P + A AIK A ++ Sbjct: 68 AVRQLNRLSVSHIVVPCNTAHHWFDALAEE---SHAPLVHIADATLYAIKPPAEAKKAPQ 124 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKIKEDEIKK 178 I +++T TL + + + + + + G + Sbjct: 125 KIGLIATHGTLNAGWYQQRFAAQLGAETVVPDEQEMTTLFVPGCYAVKRGELQHGG---R 181 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 ++ + + + +VLACT Sbjct: 182 LLDQLAAQLVARGAERLVLACT 203 >gi|154488878|ref|ZP_02029727.1| hypothetical protein BIFADO_02186 [Bifidobacterium adolescentis L2-32] gi|154083015|gb|EDN82060.1| hypothetical protein BIFADO_02186 [Bifidobacterium adolescentis L2-32] Length = 230 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 46/137 (33%), Gaps = 18/137 (13%) Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSG--LISILST 128 V+ CNTA D+ ++ ++ L GAV + A Y ++ + L T Sbjct: 65 MGASFIVLTCNTA-HYFYDDFQA-LTTVPILHMPRGAV--ARMAQRYPKNRFPRVGFLGT 120 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV-----EEYACGIKIKEDEIKKEIEGC 183 + + + + + L +R+ ++ ++ + + + Sbjct: 121 VGSRKSGVYKRAVEE-AGYTFVE--PTDELQARITSLIYDDVKGSGELNLERYESVLRDM 177 Query: 184 FIEKEGKRTDVIVLACT 200 D ++L CT Sbjct: 178 LDPAGPCACDTLILGCT 194 >gi|303326669|ref|ZP_07357111.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3] gi|302862657|gb|EFL85589.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3] Length = 237 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 47/152 (30%), Gaps = 20/152 (13%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + + + + ++ + CNTA TL M F+ V + Sbjct: 64 IEAYLEVIQRLRSAGATKIA-MCCNTAHWGITTL------EKKSGMPFINIVHEVIMQVK 116 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T I +L++ L+ ++ + S+ L V C K K + Sbjct: 117 GTGKKNIGLLASDGCLKGRVYEPYFEEFLPYATLIY-PSLHLQREVTRGICNTKNKSRLL 175 Query: 177 --------KKEIEGCFIEKEGKRTDVIVLACT 200 K E G D++++ CT Sbjct: 176 PDGHENRPKTIFTRVADEMFGAGADLLIIGCT 207 >gi|229158366|ref|ZP_04286431.1| amino-acid racemase [Bacillus cereus ATCC 4342] gi|228625113|gb|EEK81875.1| amino-acid racemase [Bacillus cereus ATCC 4342] Length = 224 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 7/129 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT Sbjct: 70 LESTGVEFLAMPCNTA-HLYFEELQRSL-SVPILNIVDETLQAIPEN-TKRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I I + + + IK + E E+ + + Sbjct: 127 VQAGIYQDGIIKRN----IEYIHHEKWQESINQIISCIKGGKIEKAHELWNALVLQLRDE 182 Query: 192 TDVIVLACT 200 D ++ACT Sbjct: 183 VDTAIIACT 191 >gi|227524709|ref|ZP_03954758.1| aspartate racemase [Lactobacillus hilgardii ATCC 8290] gi|227088193|gb|EEI23505.1| aspartate racemase [Lactobacillus hilgardii ATCC 8290] Length = 242 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 7/130 (5%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS-GLISILSTPAT 131 + P VI CNTA D+L++ S+ L +K+ S + +++T T Sbjct: 74 QLDPDFFVIPCNTA-HYSFDDLQA-LTSVPILHMPRETVKEIKHDVPSAKRVGLIATRGT 131 Query: 132 LRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 L I ++ + + + ++ +I + K Sbjct: 132 LHDGIYDQEIRHAGYDLVKPDEKTANQTMELIYDDIKEKNQVDGDLYHQILSTMVNK--F 189 Query: 191 RTDVIVLACT 200 DV++L CT Sbjct: 190 SCDVVILGCT 199 >gi|296158356|ref|ZP_06841187.1| aspartate racemase [Burkholderia sp. Ch1-1] gi|295891300|gb|EFG71087.1| aspartate racemase [Burkholderia sp. Ch1-1] Length = 232 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L++ L ++A NT + + + + + FL A + +L Sbjct: 67 AARRLEQGGADLVMLATNTM-HRVYESIEAAI-DVPFLHIADPTGSALRAAGIERVGLLG 124 Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ +T YT L Y + + + R+ D + + Sbjct: 125 TRYTMEQTFYTGRLHERYGLETLVPDQAERADVHRIIYDELCHGKVNDASRAVYQRVIEA 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAARGAQAVILGCT 198 >gi|317492681|ref|ZP_07951108.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919431|gb|EFV40763.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 245 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 60/188 (31%), Gaps = 32/188 (17%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA---------FTLIKDELRSTFPSMA 103 G L++ L +L+ VI CNTA + Sbjct: 57 GPSPYDYLERYL-----HMLETAGAECIVIPCNTAHYWFDRLQHSAHAEM---------- 101 Query: 104 FLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE 163 + + A A S + +L+T ATL H Q V S V Sbjct: 102 -INILDAT-LAELPHASQTVGLLATDATLATGLYQ---HKLDQQGRTLCVPEGDGQSAVM 156 Query: 164 EYACGIKIKEDEI-KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 + K + + + + + D+I++ CT PLI+ ++D+ Sbjct: 157 QAIYAYKAGDIALSQSLLFPQVEALMTRGADIIIMGCTEIPLIIGAEEDRFNCG--FIDS 214 Query: 223 SDSIARRA 230 + ++ R A Sbjct: 215 TAALVRAA 222 >gi|260752413|ref|YP_003225306.1| aspartate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551776|gb|ACV74722.1| aspartate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 232 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 58/155 (37%), Gaps = 8/155 (5%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIA--CNTAFTLIKDELRSTFPSMAFLGAVPAI 111 + + L LM ++++ VIA NT ++ D+L+ + + V A Sbjct: 54 DKDYTKLTTYLMHGVNNLIAAGAD---VIALTGNTP-HIVFDDLQKQ-SDVPLISIVEAT 108 Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 + +L T T+ + LI + ++ +A++++ Sbjct: 109 CDEVKRQNITKVGLLGTRFTMEADFFKKPLIANGMNVITPQPKEIDYIANKIDSELEKGI 168 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 ++ + + I ++ + I+L CT PL+ Sbjct: 169 FSQNTLSEFISIISRMRDSDGIEAIILGCTELPLL 203 >gi|313893945|ref|ZP_07827511.1| aspartate racemase [Veillonella sp. oral taxon 158 str. F0412] gi|313441509|gb|EFR59935.1| aspartate racemase [Veillonella sp. oral taxon 158 str. F0412] Length = 222 Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 9/143 (6%) Query: 63 RLMFLFSDI---LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 R + SD L+K VI NT + + + L A A + Sbjct: 50 RSAEILSDAAQSLEKAGADYIVICTNTMHKVADEI--ERHIHIPLLHI--AEMTAVELEK 105 Query: 120 SG--LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 SG + +L T T+++ + ++ + I + L + + + + +E K Sbjct: 106 SGITKVGLLGTKYTMQQDFYKCILENRGIHVVIPNEDQVELVNDIIYNELCLGVISNESK 165 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 ++ + ++L CT Sbjct: 166 QQYLDIIDDLVKSGVQGVILGCT 188 >gi|328552173|gb|AEB22665.1| aspartate racemase [Bacillus amyloliquefaciens TA208] Length = 226 Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 11/131 (8%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K I CNTA + + L+ IK+ ++ ++L+T T Sbjct: 70 LEKTGVDFIAIPCNTA-HIYFNSLKKLISVPLLNMVDETIKKIPKGSKKA--ALLATSPT 126 Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ + + + +E+ G + + E+ EK Sbjct: 127 VQSGIFQEALIRENYDFLHQDSWQTCVD--QIIEKIKQGQINESITLFDELHRELAEK-- 182 Query: 190 KRTDVIVLACT 200 D ++ACT Sbjct: 183 --VDTAIIACT 191 >gi|21231234|ref|NP_637151.1| putative resistance protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768759|ref|YP_243521.1| putative resistance protein [Xanthomonas campestris pv. campestris str. 8004] gi|21112881|gb|AAM41075.1| putative resistance protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574091|gb|AAY49501.1| putative resistance protein [Xanthomonas campestris pv. campestris str. 8004] Length = 234 Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 41/138 (29%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + M + L V+ NT + D + + P + L A A Sbjct: 66 QAMATAARALQAGGADFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGILR 123 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + + + RV + + + + Sbjct: 124 VGLLGTRFTMEQPFYRERLEARGLDVLVPPAEARAQLHRVIYDELCQGVIKPKSRDYFRQ 183 Query: 183 CFIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 184 VMADLGQHGAQAIILGCT 201 >gi|261886484|ref|ZP_06010523.1| aspartate racemase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 232 Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 37/203 (18%) Query: 23 IGG------LIVLQ----KMRFLMPEYH----FIYVADDVGFPYGNWEDHALKKR----- 63 IGG L + ++R + H +Y + + H ++K Sbjct: 10 IGGMSWESTLTYYKVLNEEIRDRLGGLHSAKCIVY----------SLDFHEIEKFQSQNE 59 Query: 64 ------LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 ++ + L+K +I NT + D + ++ + F+ QA Sbjct: 60 WQKSGKVLLDAALNLEKAGAECVMICTNTMHKVA-DMITASLK-IPFIHIADVTAQALKQ 117 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 S +L T T+ ++ + I + + + S + V I + K Sbjct: 118 NGSKKALLLGTKYTMTESFYKDKISNNSIEVVVPNKSDTDFINSVIFNELCIGNIKQSSK 177 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 E E + D ++L CT Sbjct: 178 IEFIKIINESKKLGVDSVILGCT 200 >gi|325695261|gb|EGD37161.1| aspartate racemase [Streptococcus sanguinis SK150] Length = 230 Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ + L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQEKI-TIPILHIAQATAQALLADGIQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + + +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLT 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 180 IIDDLKKAGAEAVILGCT 197 >gi|222149060|ref|YP_002550017.1| aspartate racemase [Agrobacterium vitis S4] gi|221736045|gb|ACM37008.1| aspartate racemase [Agrobacterium vitis S4] Length = 237 Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 11/125 (8%) Query: 81 VIAC-NT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ C NT A + S+ + V A QA +L+T T+ Sbjct: 79 VLICTNTMHLIADAVAARV------SVPLIHIVDATAQAIKDAGFKRPLLLATRYTMEHG 132 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + ++ + + + + V E + + + + D + Sbjct: 133 FYTDRMRALGLLPMVPGAEDRGIVHDVIFDELCAGRVEAQSRAAYLAIIEKAKADGADCV 192 Query: 196 VLACT 200 +L CT Sbjct: 193 ILGCT 197 >gi|253701650|ref|YP_003022839.1| aspartate racemase [Geobacter sp. M21] gi|251776500|gb|ACT19081.1| aspartate racemase [Geobacter sp. M21] Length = 232 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 56/154 (36%), Gaps = 13/154 (8%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 L+ L K + I+ NT ++ DE+++ P + + V A + A Sbjct: 61 YLLTAKVKALQKAGAEFAFISANTP-HVVFDEVQAKSP-LPLVSIVTATLEKAKGLGVTR 118 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSM-----ILASRVEEYACGIKIKEDEIK 177 + +L T T+ + + + + ++ L + +E + ++ + Sbjct: 119 VGLLGTKFTMEENFFAPPFSAAGISVVVPPLADRQYIQEKLMTEIELGVFKDETRDGLLA 178 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYP--LIVHVF 209 KE + D ++L CT P L+ F Sbjct: 179 VIGR----MKEQEHIDAVILGCTELPLILLKDEF 208 >gi|332365373|gb|EGJ43136.1| aspartate racemase [Streptococcus sanguinis SK1059] Length = 230 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ + L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADIAQRLEQAGADFIVICTNTMHKVA-PQIQEKI-TIPILHIAQATAQALLADGIQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + + +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESELEVLIPDQAGITEVNRIIYDELCLGNIKESSKQTYLA 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 180 VIDDLKKAGAEAVILGCT 197 >gi|126650720|ref|ZP_01722936.1| aspartate racemase [Bacillus sp. B14905] gi|126592385|gb|EAZ86403.1| aspartate racemase [Bacillus sp. B14905] Length = 232 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 6/140 (4%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 ++ + L++ VI NT ++ + ++ L A Sbjct: 62 FVLAQAAQSLEQAGADFIVICTNTMHKVV--AVIEEAITIPILHIADATANQIKEAGLQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEI 180 I++L T T+ + + + + Y + + S + +R+ EE G + K Sbjct: 120 IALLGTMYTMEQEFYKSRVEGYGIEVIVPDYHSRMEVNRIIYEELCLGSIVPNS--KSYY 177 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + ++L CT Sbjct: 178 IQVINDLVQAGAQGVILGCT 197 >gi|19910916|dbj|BAB87709.1| glutamate racemase [Helicobacter pylori] Length = 78 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 8/76 (10%) Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 CTH+PLI + + D+I + F Sbjct: 3 GCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFPKVEFH 60 Query: 252 LSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 61 ASGDVVWLEKQAKEWL 76 >gi|332158134|ref|YP_004423413.1| hydantoin racemase [Pyrococcus sp. NA2] gi|331033597|gb|AEC51409.1| hydantoin racemase [Pyrococcus sp. NA2] Length = 226 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 22/131 (16%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +K +I+C A +E R S+ +GA A+ A Q + +L T Sbjct: 68 FEKRGVDAIIISC--AADPAVEEARREV-SIPVVGAGSAVASLALA-QGRKVGVL--NLT 121 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK--EIEGCFIEKEG 189 T +I + I EE+ G+K D ++K EI + Sbjct: 122 ---EKTPKVIKEVLGDHLI-----------AEEHPEGVKNTLDLMEKKTEIVEAARRLKE 167 Query: 190 KRTDVIVLACT 200 + +VIVL CT Sbjct: 168 RGVEVIVLGCT 178 >gi|27383265|ref|NP_774794.1| aspartate racemase [Bradyrhizobium japonicum USDA 110] gi|27356439|dbj|BAC53419.1| aspartate racemase [Bradyrhizobium japonicum USDA 110] Length = 229 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 43/137 (31%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 + + L+ V+ NT L + + ++ F+ + Q + Sbjct: 63 SLAEVAQRLESAGARAIVLCTNTMHKLAPEIVAKL--TIPFVHIGDSTAQRIRSKGYRRV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + ++ + + +R+ + + + Sbjct: 121 GLLGTKFTMEEDFYIDRLRAHDLDVLVPPAEARADVNRIIYDELCLGNVAAPSRCRYQEV 180 Query: 184 FIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 181 MAALVARGAECIILGCT 197 >gi|325262389|ref|ZP_08129126.1| putative aspartate racemase [Clostridium sp. D5] gi|324032221|gb|EGB93499.1| putative aspartate racemase [Clostridium sp. D5] Length = 230 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 4/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+ +I NT + +++S + + A Q Q Sbjct: 63 ILGEAAKGLEAAGADFILICTNTMHKVA-PQIQSMI-HIPIIHIADATAQELEKCQIRRA 120 Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T+ + + LI + ++ + C KI+E+ +K+ + Sbjct: 121 GLLGTKYTMTQAFYKQRLIDRGIDVVIPDGEDIDVMNDIIFHELCVGKIREES-RKKFQD 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + K D ++L CT Sbjct: 180 IIDRLKDKGADGVILGCT 197 >gi|327401693|ref|YP_004342532.1| aspartate racemase [Archaeoglobus veneficus SNP6] gi|327317201|gb|AEA47817.1| aspartate racemase [Archaeoglobus veneficus SNP6] Length = 229 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 2/141 (1%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+K +I NT + +E++ S+ L + + +L Sbjct: 67 AAQRLEKAGADFVIICTNTMHKVA-EEVQEGI-SIPLLHIADVTAEKIKEKGLRNVGLLG 124 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + + + I ++ V I E K+ + Sbjct: 125 TKFTMEEDFYKKKLGESGIEVIIPEEDERVVVHSVIYNELCQGIIRQESKERFKEIIGNL 184 Query: 188 EGKRTDVIVLACTHYPLIVHV 208 K + IVL CT PL++ Sbjct: 185 VSKGAEGIVLGCTEIPLLIKQ 205 >gi|220904293|ref|YP_002479605.1| aspartate racemase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868592|gb|ACL48927.1| aspartate racemase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 238 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 45/152 (29%), Gaps = 20/152 (13%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + + + ++ + CNTA TL M F+ + + Sbjct: 64 IEAYLEAIQKVRSAGATKIA-MCCNTAHWGISTL------EQKSGMPFINVIYEVLMLVK 116 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 T I +L++ L+ + + L S L + C IK K + Sbjct: 117 KTGKKNIGLLASDGCLKGRVYEQYFEKLLPDVTL-LYPSDQLQREITRGICNIKNKSRLL 175 Query: 177 --------KKEIEGCFIEKEGKRTDVIVLACT 200 + + D++++ CT Sbjct: 176 PEDHPDRPRNIFTRVTAKMFDSGADLLIIGCT 207 >gi|294664647|ref|ZP_06729983.1| aspartate racemase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605582|gb|EFF48897.1| aspartate racemase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 234 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 2/123 (1%) Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ NT + D + + P + L A A I +L T T+ + + Sbjct: 81 DFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGISRIGLLGTRFTMEQPFY 138 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + + + RV + + E ++ + E + I+L Sbjct: 139 RQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIKPESRQYVCQVMTELGQQGAQAIIL 198 Query: 198 ACT 200 CT Sbjct: 199 GCT 201 >gi|229069752|ref|ZP_04203037.1| hypothetical protein bcere0025_19550 [Bacillus cereus F65185] gi|229079392|ref|ZP_04211934.1| hypothetical protein bcere0023_20470 [Bacillus cereus Rock4-2] gi|228703925|gb|EEL56369.1| hypothetical protein bcere0023_20470 [Bacillus cereus Rock4-2] gi|228713373|gb|EEL65263.1| hypothetical protein bcere0025_19550 [Bacillus cereus F65185] Length = 231 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 47/131 (35%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + I + + + + ++V E G + + ++ + E Sbjct: 129 MEQDFYKSRIEEHDIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYKRVIEELVQ 186 Query: 190 KRTDVIVLACT 200 K I+L CT Sbjct: 187 KGAQGIILGCT 197 >gi|298253387|ref|ZP_06977179.1| aspartate racemase [Gardnerella vaginalis 5-1] gi|297532782|gb|EFH71668.1| aspartate racemase [Gardnerella vaginalis 5-1] Length = 242 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 20/161 (12%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPAT 131 V+ CNTA D+ ++ + + GAV + + ++ I L T + Sbjct: 77 GASFIVLTCNTA-HYFYDKFQA-LTDVPIIHMPRGAVAEVSKRYPKSKCNRIGFLGTAGS 134 Query: 132 LRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 + I + + ++ V + + E + Sbjct: 135 RKAGVYQRAIEEAGYTFVAPDDDLQKRITSLIYDDV-KGTGDLDFHRYE--SVLSDMLDP 191 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226 R D ++L CT L V + P + +D + ++ Sbjct: 192 AGACRCDALILGCT--EL--SVLNEAFPLPQIPLVD-AQAV 227 >gi|257865939|ref|ZP_05645592.1| aspartate racemase [Enterococcus casseliflavus EC30] gi|257872272|ref|ZP_05651925.1| aspartate racemase [Enterococcus casseliflavus EC10] gi|257875566|ref|ZP_05655219.1| aspartate racemase [Enterococcus casseliflavus EC20] gi|257799873|gb|EEV28925.1| aspartate racemase [Enterococcus casseliflavus EC30] gi|257806436|gb|EEV35258.1| aspartate racemase [Enterococcus casseliflavus EC10] gi|257809732|gb|EEV38552.1| aspartate racemase [Enterococcus casseliflavus EC20] Length = 236 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 8/138 (5%) Query: 67 LFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 L DI + +P V+ CNTA DEL++ A K +G ++ Sbjct: 65 LMDDIEKQNLLKPNFIVLTCNTA-HYFFDELQAATEIEILHMPREAAKVVFEKGVTGKVA 123 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 L T +++ + + + + + +V + D + +E+ Sbjct: 124 FLGTEGSVKAGIYEKELRKFGLDVY---LPEPTIQKKVNTLIYDRIKENDHLDQELYFEI 180 Query: 185 IEKEGKRT--DVIVLACT 200 +E+ +R + +VL CT Sbjct: 181 LEEVTERIGCESVVLGCT 198 >gi|227114407|ref|ZP_03828063.1| putative aspartate/glutamate racemase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 236 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 51/159 (32%), Gaps = 9/159 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + VI NT + D + L A + + +L T T Sbjct: 73 LRQAGAEAIVICTNTMHKVADDV--EHACQLPLLHIADATGASLKQHGLKKVGLLGTRYT 130 Query: 132 LRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + I + + + +R+ + D ++ + E + Sbjct: 131 MEQDFYRQRIQERFGVEVIVPDHEGKEAVNRIIYDELCLGNINDASRQIYRDIIQQLEQQ 190 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS--DSIA 227 + I+L CT PL++ + V D S +IA Sbjct: 191 GAEGIILGCTEIPLLISA-QDA---KVPLFDTSRLHAIA 225 >gi|42779389|ref|NP_976636.1| aspartate racemase [Bacillus cereus ATCC 10987] gi|42735305|gb|AAS39244.1| aspartate racemase [Bacillus cereus ATCC 10987] Length = 234 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 56/170 (32%), Gaps = 11/170 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L VIACNTA + ++ L + + +L+T T Sbjct: 71 LQNAGADFLVIACNTA--HFFYKAVKRSVNIPILHMPLETARFVQENNFRKVGLLATDGT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190 ++ N Y + + + +V E IK + + +K + Sbjct: 129 VKAELYQNSCQDY--RIDVID-PDKEMQKKVMEGIYAIKSGDLKTGCLHLSMVADKLKES 185 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 + I+ CT PL++ + +D ++ +A+ + + T Sbjct: 186 GAEAIIAGCTEVPLVLKS-----SENICVIDPTEIVAKVVIKIANKTETE 230 >gi|289423113|ref|ZP_06424928.1| aspartate racemase [Peptostreptococcus anaerobius 653-L] gi|289156444|gb|EFD05094.1| aspartate racemase [Peptostreptococcus anaerobius 653-L] Length = 240 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 8/131 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ V+ CNTA D+++ + ++ L + A I I++T Sbjct: 74 LEACGVDFMVLTCNTA-HYFYDKIKDSI-NVPILNMLEETVGHAIKKGHKKIGIMATTGN 131 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ ++ S +I ++ ++ G K DE + ++ + Sbjct: 132 IKTGLYQSMCQSKGVDYYILDDDMQKKVMKIIYDDVKAGKKADMDEFNEIVD----VLKA 187 Query: 190 KRTDVIVLACT 200 D +L CT Sbjct: 188 NGCDCAILGCT 198 >gi|15891841|ref|NP_357513.1| hydantoin racemase [Agrobacterium tumefaciens str. C58] gi|15160325|gb|AAK90298.1| hydantoin Racemase [Agrobacterium tumefaciens str. C58] gi|38016571|gb|AAR07619.1| hydantoin racemase 2 [Agrobacterium tumefaciens str. C58] Length = 247 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 25/164 (15%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +VIAC D R+ F + +G A A A+ + T R Sbjct: 68 GVDAAVIAC--FDDTGLDAARA-FCDIPVIGLCEAAVSATAFIAQK--FTIVTTMERSRL 122 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L+H Y ++ ++ I +E+ A + +++EI + + R + I Sbjct: 123 PLEHLVHRYGMSARCNVRAADIPVLSLEDPASN---ARERLRQEIA---LALKEDRAEAI 176 Query: 196 VLAC------THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 VL C T R V +D + ++A L Sbjct: 177 VLGCAGMADLT------AELRAEFG--VPVVDGVAAAVKQAESL 212 >gi|300725002|ref|YP_003714327.1| putative aspartate racemase [Xenorhabdus nematophila ATCC 19061] gi|297631544|emb|CBJ92251.1| putative aspartate racemase [Xenorhabdus nematophila ATCC 19061] Length = 230 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 8/138 (5%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 M IL+ ++ CNTA DEL+++ + FL V ++ Sbjct: 64 MLAALRILEAAGAECIIMPCNTA-HYWYDELKAS-TKIPFLNIVEVTCNKIVSEGINNVA 121 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEG 182 IL+T T++ + + ++ V + R+ E ++ + IE Sbjct: 122 ILATTGTIKIGLYQDRLRKEN----VNFVVPDDIQQRIIMESILAYKSGDGEKAYQLIES 177 Query: 183 CFIEKEGKRTDVIVLACT 200 + + + ++ CT Sbjct: 178 VITQLKHVGVEHFIMGCT 195 >gi|229029942|ref|ZP_04186010.1| hypothetical protein bcere0028_20240 [Bacillus cereus AH1271] gi|228731369|gb|EEL82283.1| hypothetical protein bcere0028_20240 [Bacillus cereus AH1271] Length = 232 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT + ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEIKKKDIQKVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + I + + + V E I E K + +++ Sbjct: 129 MEQDFYKLRIEENHIKVMVPSKKDRDKVNEVIYTELCLGKITSPSREYYKRVIEELVQEG 188 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 189 AQGI---ILGCT 197 >gi|254169000|ref|ZP_04875839.1| aspartate racemase subfamily [Aciduliprofundum boonei T469] gi|197622106|gb|EDY34682.1| aspartate racemase subfamily [Aciduliprofundum boonei T469] Length = 225 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 51/145 (35%), Gaps = 13/145 (8%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 ++ + L+ + ++ NT ++ D L + + + A+ + A Sbjct: 57 REIYLLEIIKALEHAGAEIIALSANTP-HIVFDSLAKK-TNAKMISIIDALAEEAKNKGY 114 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDE 175 + ++ T T+ + + + + + ++ E G+ ++ Sbjct: 115 KKLLLMGTKTTMTSGFYKRKLEEHGFEVIVPE----EYVDEIDRIISRELGYGVLKSKNR 170 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 + +E +K+ + D +L CT Sbjct: 171 LINIVESY--KKKYEDLDAAILGCT 193 >gi|218507901|ref|ZP_03505779.1| probable aspartate racemase protein [Rhizobium etli Brasil 5] Length = 261 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 56/181 (30%), Gaps = 18/181 (9%) Query: 24 GGLIVLQKMRFLMPEYHFIYV---ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 GGL + + + + + D G +RL + + + Sbjct: 63 GGLASAEIILHSVNFEEIVALQKAGDWAGA----------ARRLGDVAERLQAAGAGCIL 112 Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 + C NT LI DE+ + S+ + + ++ +L+T T+ + + Sbjct: 113 I--CTNTM-HLIADEVAAKV-SVPLIHIIDETAKSLHAAGRKRPLLLATRYTMEHGFYAE 168 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + S + + + D ++++ D I+L C Sbjct: 169 RMKSLGLDIMVPEAADRTTVHDIIFNELCAGRVHDRSREKLIDIIDRAVENGADSIILGC 228 Query: 200 T 200 T Sbjct: 229 T 229 >gi|294793056|ref|ZP_06758202.1| putative aspartate racemase [Veillonella sp. 6_1_27] gi|294794905|ref|ZP_06760040.1| putative aspartate racemase [Veillonella sp. 3_1_44] gi|294454267|gb|EFG22641.1| putative aspartate racemase [Veillonella sp. 3_1_44] gi|294456001|gb|EFG24365.1| putative aspartate racemase [Veillonella sp. 6_1_27] Length = 231 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 45/214 (21%) Query: 14 NSILIFDSGIGGLI---------VLQK-MRFLMPEYH----FIYVADDVGFPYGNWEDHA 59 +I + IGG+ VL + ++ ++ H +Y D Sbjct: 2 KTIGL----IGGMSWESTITYYQVLNETIKQVLGGLHSAKCILYSVD----------FEE 47 Query: 60 LKK--------RLMFLFSDI---LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108 ++K R + SD L+K VI NT + DE++ + L Sbjct: 48 IEKCQANGDWVRSAEILSDAAQSLEKAGADYIVICTNTMHKVA-DEIKRHI-HIPLLHI- 104 Query: 109 PAIKQAAAYTQSG--LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166 A A +SG + +L T T+++ + ++ + I + L + + Sbjct: 105 -AEMTAVELEKSGITKVGLLGTKYTMQQDFYKCILENRGIHVVIPNEDQVELVNDIIYNE 163 Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + + +E K++ + ++L CT Sbjct: 164 LCLGVISNESKQQYLDIIGDLVKSGVQGVILGCT 197 >gi|257470749|ref|ZP_05634839.1| putative amino acid recemase [Fusobacterium ulcerans ATCC 49185] gi|317064954|ref|ZP_07929439.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185] gi|313690630|gb|EFS27465.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185] Length = 230 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 6/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+K VI NT + +++ ++ L A + Sbjct: 61 AKILTEAAQSLEKAGADFIVICTNTMHKIA-PDIQKNI-NIPILHIAEATADELDKKEIK 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKE 179 +++L T T+ + + N + + I +RV EE G + KK Sbjct: 119 KVALLGTKYTMEQDFYKNKLIDRGIEVVIPDDEDRAEVNRVIYEELCLGKILPAS--KKR 176 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 + ++L CT Sbjct: 177 FLDIMDKLAKNGAQGVILGCT 197 >gi|291485976|dbj|BAI87051.1| amino acid racemase [Bacillus subtilis subsp. natto BEST195] Length = 227 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 64/190 (33%), Gaps = 16/190 (8%) Query: 52 YGNWEDH--ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109 Y + +KK ++ L+K + CNTA + +E++ Sbjct: 49 YADRPIDHDEMKKAIIDGAVK-LEKTDVDFIALPCNTA-HVYYEEIQQALSVPMLHIVEE 106 Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 IK+ + + +L T T++ ++ + V V + I Sbjct: 107 TIKEIPHPAKKAV--VLGTEPTIQSAIYQKVLEENGQEV----VHKDHWQQAVNQLIAAI 160 Query: 170 KIKED-EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 K E + + E+ + D+I+ ACT ++ + P +D+S +A+ Sbjct: 161 KQPNHMEYSQSLWQTLYEEISQHADIIISACTDLNAVLDHIQSEIP----MIDSSACLAK 216 Query: 229 R-ARCLLPRI 237 L Sbjct: 217 STVSTYLAYQ 226 >gi|228988009|ref|ZP_04148113.1| amino-acid racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771726|gb|EEM20188.1| amino-acid racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 224 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 7/129 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT Sbjct: 70 LESTGVEFLAMPCNTA-HLYFEELQRSL-SVPILNIVDETLQAIPEN-TKRVALLATEAT 126 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ + I I + + + IK + E E+ + + Sbjct: 127 VQAGIYQDGIIKRN----IEYIHHEKWQESINQIISCIKGGKIEKAHELWNVLVLQLRDE 182 Query: 192 TDVIVLACT 200 D ++ACT Sbjct: 183 VDTAIIACT 191 >gi|269967741|ref|ZP_06181789.1| hypothetical protein VMC_32190 [Vibrio alginolyticus 40B] gi|269827647|gb|EEZ81933.1| hypothetical protein VMC_32190 [Vibrio alginolyticus 40B] Length = 232 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 52/164 (31%), Gaps = 31/164 (18%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++K +I NT + ++ ++ ++ L A + + +L T T Sbjct: 71 IEKGGADFILICTNTMHKVA-PQIEASV-NIPILHIADATAELLREKGVQKVGLLGTQFT 128 Query: 132 LRRTYTSN----------LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + + + +I + +H + + + C +IKE+ + Sbjct: 129 MEQDFYKGRLSDLYGLDVVIPDQDDRSKVHNI--------IYKELCQGEIKEES-RTIYL 179 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222 + + + ++L CT L V LD Sbjct: 180 QIIEKLKEHGAEAVILGCT-------EIALLVNQSHTEVTLLDT 216 >gi|325689132|gb|EGD31139.1| aspartate racemase [Streptococcus sanguinis SK115] Length = 230 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ + L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQEQI-TIPILHIAQATAQALLADGIQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + + +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLT 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 180 IIDDLKKAGAEAVILGCT 197 >gi|241205619|ref|YP_002976715.1| Asp/Glu/hydantoin racemase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859509|gb|ACS57176.1| Asp/Glu/hydantoin racemase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 247 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 64/173 (36%), Gaps = 23/173 (13%) Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123 L +++ ++ +VIAC + R TF + LG A+ A Q + Sbjct: 57 LLAELRERQGVGYDAAVIAC--FDDTGLEAAR-TFADVPILGLCESAVVTAGFLAQRFTV 113 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 T R NL+ Y + +S I +E+ A G +++ EIE Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGDRAKVRASDIPVLELEDPASGAI---GKLRAEIERA 167 Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 +E + IVL C T + +Q+ V +D + ++A L Sbjct: 168 LLE---DGAEAIVLGCAGMT---DLARELQQIYG--VPVVDGVAAAVKQAEAL 212 >gi|119026105|ref|YP_909950.1| aspartate racemase [Bifidobacterium adolescentis ATCC 15703] gi|118765689|dbj|BAF39868.1| aspartate racemase [Bifidobacterium adolescentis ATCC 15703] Length = 241 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 14/135 (10%) Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPA 130 V+ CNTA D+ ++ ++ L GAV + Q + + L T Sbjct: 76 MGASFIVLTCNTA-HYFYDDFQA-LTTVPILHMPRGAVARMAQRYPKDRFPRVGFLGTVG 133 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRV-----EEYACGIKIKEDEIKKEIEGCFI 185 + + + + + L +R+ ++ ++ + + + Sbjct: 134 SRKSGVYKRAVEE-AGYTFVE--PTDELQARITSLIYDDVKGSGELNLERYESVLRDMLD 190 Query: 186 EKEGKRTDVIVLACT 200 D ++L CT Sbjct: 191 PAGPCACDTLILGCT 205 >gi|228997316|ref|ZP_04156938.1| Aspartate racemase [Bacillus mycoides Rock3-17] gi|229004941|ref|ZP_04162668.1| Aspartate racemase [Bacillus mycoides Rock1-4] gi|228756289|gb|EEM05607.1| Aspartate racemase [Bacillus mycoides Rock1-4] gi|228762408|gb|EEM11333.1| Aspartate racemase [Bacillus mycoides Rock3-17] Length = 243 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+K VI NT + ++ S+ L A + Sbjct: 66 VLGEAAYSLEKAGADFIVICTNTM-HKVISNIKDKV-SIPILHIADATAMEIKKQGIRSV 123 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + I + I + L +R+ + + + Sbjct: 124 GLLGTKYTMEQDFYKSRIEEKGMRVMIPNETDRELVNRIIYNELCLGKVNQTSRDSYKEI 183 Query: 184 FIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 184 INRFVQNGAEGIILGCT 200 >gi|299769459|ref|YP_003731485.1| aspartate racemase [Acinetobacter sp. DR1] gi|298699547|gb|ADI90112.1| aspartate racemase [Acinetobacter sp. DR1] Length = 250 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 7/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 L ++ + V C NT + S+ FL A + Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAAQI--EDLISIPFLHIADATAKEILSQNI 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179 G +++L T T+ + + + Y I + + S + E C I D ++ Sbjct: 118 GKVALLGTAFTMEQDFYKARLQDYGIHVVIPNEADRKIVHSIIYEELCLGVINPDSQQQY 177 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 I + T ++L CT Sbjct: 178 IA-IVERLIAEGTQGVILGCT 197 >gi|317129519|ref|YP_004095801.1| aspartate racemase [Bacillus cellulosilyticus DSM 2522] gi|315474467|gb|ADU31070.1| aspartate racemase [Bacillus cellulosilyticus DSM 2522] Length = 236 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 38/177 (21%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQS--GLISILST 128 L+ +I C+TA EL+ ++ + + + + T++ + IL+T Sbjct: 74 LEAAGADFIIIPCHTA-HYWFRELQDQL-NIPIINMIDNTVNYINSLTKNESQKVLILAT 131 Query: 129 PATLRRTYTSNL--IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE-GCFI 185 T+ N I + EE K + +E +I Sbjct: 132 RGTIYSKIFQNEFMIKRI-----------PYVVPNSEEQEIVSKAIDFTKSNLVETNPYI 180 Query: 186 EKEGKRTD--------VIVL-ACTHYPLIVHVFRQLSPW---PVDWLDNSDSIARRA 230 K D +L CT L P+ +D+S +A+RA Sbjct: 181 SKLNNMIDNYITGNHITCILAGCT-------EISLLLPYLTHKCSKIDSSLLLAKRA 230 >gi|325266150|ref|ZP_08132834.1| aspartate racemase [Kingella denitrificans ATCC 33394] gi|324982380|gb|EGC18008.1| aspartate racemase [Kingella denitrificans ATCC 33394] Length = 229 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 20/146 (13%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 L+ + L ++A NT + + S+ FL + A+ QA + Sbjct: 63 LLAQSARTLQNAGAQGILLATNTMHKVAVPIAAAV--SVPFLHILDAVAQAVRVQGFATV 120 Query: 124 SILSTPATLRRTYT---------SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 +L T T++ + L+ Q IH + + + C +I+ED Sbjct: 121 GLLGTRFTMQDGFYTDGLAERGIRTLVPDEAEQAEIHRI--------IFDELCTGQIRED 172 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200 ++ + + ++L CT Sbjct: 173 SKRRYL-NAIAALAKRGAQAVILGCT 197 >gi|90418902|ref|ZP_01226813.1| aspartate racemase [Aurantimonas manganoxydans SI85-9A1] gi|90336982|gb|EAS50687.1| aspartate racemase [Aurantimonas manganoxydans SI85-9A1] Length = 231 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 37/147 (25%), Gaps = 10/147 (6%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 L RL+ + +L + C NT + L + Sbjct: 58 DELTARLVEAARKLETAGADILLI--CTNTM--HRMAPAIEAAVQVPLLHIADPTAERIK 113 Query: 117 YTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKE 173 + +L T T+ + + L + + RV EE G + Sbjct: 114 AAGLQKVGLLGTAFTMEQDFYKGRLAERHGLNVLVPNAEDRATIHRVIYEELVAGQIVDT 173 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACT 200 + ++L CT Sbjct: 174 S--RDAYRAVIARLVDAGAQSVILGCT 198 >gi|30262238|ref|NP_844615.1| aspartate racemase family protein [Bacillus anthracis str. Ames] gi|47527517|ref|YP_018866.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49185078|ref|YP_028330.1| aspartate racemase family protein [Bacillus anthracis str. Sterne] gi|65319528|ref|ZP_00392487.1| COG1794: Aspartate racemase [Bacillus anthracis str. A2012] gi|165872211|ref|ZP_02216849.1| aspartate racemase family protein [Bacillus anthracis str. A0488] gi|167632939|ref|ZP_02391265.1| aspartate racemase family protein [Bacillus anthracis str. A0442] gi|167641077|ref|ZP_02399333.1| aspartate racemase family protein [Bacillus anthracis str. A0193] gi|170686450|ref|ZP_02877671.1| aspartate racemase family protein [Bacillus anthracis str. A0465] gi|170708451|ref|ZP_02898894.1| aspartate racemase family protein [Bacillus anthracis str. A0389] gi|177650980|ref|ZP_02933877.1| aspartate racemase family protein [Bacillus anthracis str. A0174] gi|190567928|ref|ZP_03020839.1| aspartate racemase family protein [Bacillus anthracis Tsiankovskii-I] gi|227814962|ref|YP_002814971.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684] gi|229603763|ref|YP_002866580.1| aspartate racemase family protein [Bacillus anthracis str. A0248] gi|254684804|ref|ZP_05148664.1| aspartate racemase family protein [Bacillus anthracis str. CNEVA-9066] gi|254737250|ref|ZP_05194954.1| aspartate racemase family protein [Bacillus anthracis str. Western North America USA6153] gi|254743563|ref|ZP_05201248.1| aspartate racemase family protein [Bacillus anthracis str. Kruger B] gi|254751566|ref|ZP_05203603.1| aspartate racemase family protein [Bacillus anthracis str. Vollum] gi|254759081|ref|ZP_05211108.1| aspartate racemase family protein [Bacillus anthracis str. Australia 94] gi|30256869|gb|AAP26101.1| aspartate racemase family protein [Bacillus anthracis str. Ames] gi|47502665|gb|AAT31341.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49179005|gb|AAT54381.1| aspartate racemase family protein [Bacillus anthracis str. Sterne] gi|164712004|gb|EDR17543.1| aspartate racemase family protein [Bacillus anthracis str. A0488] gi|167510975|gb|EDR86365.1| aspartate racemase family protein [Bacillus anthracis str. A0193] gi|167531751|gb|EDR94416.1| aspartate racemase family protein [Bacillus anthracis str. A0442] gi|170126690|gb|EDS95574.1| aspartate racemase family protein [Bacillus anthracis str. A0389] gi|170669526|gb|EDT20268.1| aspartate racemase family protein [Bacillus anthracis str. A0465] gi|172083441|gb|EDT68502.1| aspartate racemase family protein [Bacillus anthracis str. A0174] gi|190560983|gb|EDV14957.1| aspartate racemase family protein [Bacillus anthracis Tsiankovskii-I] gi|227004374|gb|ACP14117.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684] gi|229268171|gb|ACQ49808.1| aspartate racemase family protein [Bacillus anthracis str. A0248] Length = 235 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 8/140 (5%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L K +I NT ++ ++++ + L A + + Sbjct: 63 ILENAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180 +L T T+ + + + I + + + V E I + E K + Sbjct: 121 GLLGTKYTMEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRV 180 Query: 181 EGCFIEKEGKRTDVIVLACT 200 I++ K +L CT Sbjct: 181 IENLIQEGAKGI---ILGCT 197 >gi|327191448|gb|EGE58470.1| putative aspartate racemase protein [Rhizobium etli CNPAF512] Length = 281 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 5/140 (3%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +RL + + + + C NT LI DE+ + S+ + + ++ Sbjct: 104 RRLGDVAERLQAAGAGCILI--CTNTM-HLIADEVAAKV-SVPLIHIIDETAKSLHAAGR 159 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +L+T T+ + + + S + + + D ++++ Sbjct: 160 KRPLLLATRYTMEHGFYAERMKSLGLDIMVPEAADRTTVHDIIFNELCAGRVHDRSREKL 219 Query: 181 EGCFIEKEGKRTDVIVLACT 200 D I+L CT Sbjct: 220 IDIIDRAVENGADSIILGCT 239 >gi|312897382|ref|ZP_07756806.1| aspartate racemase [Megasphaera micronuciformis F0359] gi|310621443|gb|EFQ04979.1| aspartate racemase [Megasphaera micronuciformis F0359] Length = 228 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 12/172 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIA--CNTAFTLIKDELRSTFPSMAFLGAVPA 110 G + L L ++++ V+A NT ++ D+L Sbjct: 51 GQKDYAGLTAYLDKGITNLVAGG---AQVVAMTGNTP-HIVFDKLSEKSHVPLVSSVAVT 106 Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 A +L T T+R + + + + + + E Sbjct: 107 AHYVAEQ-GLKRPLLLGTLFTMREDFFKKAFRDKGIEAIVPEEADQLKVHKFIEKELEAG 165 Query: 171 IKEDEIKKEIEGCFIEKEG-KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221 + +K E G D ++L CT P++ V +D Sbjct: 166 SITETAQKYFSNLVEEMIGSHHIDTLILGCTELPILFKT----MNISVPVVD 213 >gi|229133055|ref|ZP_04261895.1| hypothetical protein bcere0014_19810 [Bacillus cereus BDRD-ST196] gi|228650412|gb|EEL06407.1| hypothetical protein bcere0014_19810 [Bacillus cereus BDRD-ST196] Length = 232 Score = 46.5 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 4/130 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ ++ L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHITDATAKEINRKGIQSVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHL-VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + + I + + L + + + C KI ++ + E K Sbjct: 129 MEQDFYKSRIEENDIKVIVPLGKDREKINEVIYKELCLGKITSQS-REYYKRVIEELVQK 187 Query: 191 RTDVIVLACT 200 I+L CT Sbjct: 188 GAQGIILGCT 197 >gi|229085172|ref|ZP_04217419.1| Aspartate racemase [Bacillus cereus Rock3-44] gi|228698153|gb|EEL50891.1| Aspartate racemase [Bacillus cereus Rock3-44] Length = 230 Score = 46.5 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+K VI NT + ++ ++ L A + Sbjct: 63 ILGEAAYSLEKAGADFIVICTNTM-HKVISNIKENV-NIPILHIADATAMEIKKHGIRSV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + I + I + +R+ + + + Sbjct: 121 GLLGTKYTMEQDFYKSCIEEKGMKVIIPNEMDREIVNRIIYNELCLGKINQTARDSYKRI 180 Query: 184 FIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 181 IHSLVQNGAEGIILGCT 197 >gi|194014592|ref|ZP_03053209.1| aspartate racemase [Bacillus pumilus ATCC 7061] gi|194013618|gb|EDW23183.1| aspartate racemase [Bacillus pumilus ATCC 7061] Length = 235 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 26/181 (14%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTP 129 L++ +IACNTA + +R + + + ++ A + + +L T Sbjct: 71 LERAGADFILIACNTA-HFFLENVRHS-THIPIMNM--PLETANYLNKHHYTSVGLLCTD 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILAS----RVEEYACGIKIKEDEIKKEIEGCFI 185 TL+ + + V+ E + EI Sbjct: 127 GTLKTQLYQRACAHHKIDVMTPSENLQKNVMNGIYAVKAGKLSEGESELALAAEI----- 181 Query: 186 EKEGKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRINTHQ 241 + + I+ CT PL + V +D + +A+ A L L ++N Sbjct: 182 -LINQGAEAIIAGCTEIPLVLRST------KEVKVIDPTVILAKEAVKLVYELEKLNIKS 234 Query: 242 T 242 T Sbjct: 235 T 235 >gi|254362280|ref|ZP_04978393.1| aspartate racemase [Mannheimia haemolytica PHL213] gi|261492806|ref|ZP_05989353.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494828|ref|ZP_05991306.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093857|gb|EDN74789.1| aspartate racemase [Mannheimia haemolytica PHL213] gi|261309539|gb|EEY10764.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311488|gb|EEY12644.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 229 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 57/140 (40%), Gaps = 4/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + +L++ ++A NT + D++ S+ S+ FL + + +A + Sbjct: 61 AEILSEQARLLEQAGAEGILLATNTMHKIA-DQI-SSHISVPFLHILDCVAEAISAQGLQ 118 Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +++L T T+ + + L+ ++ + + + E C KI E K Sbjct: 119 KVALLGTKFTMSDNFYKDGLLERGITSIVPDEETQQEIHRIIFEELCLGKITESA-KAFY 177 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 178 LQTIQQLSEQGAEGVILGCT 197 >gi|310778942|ref|YP_003967275.1| aspartate racemase [Ilyobacter polytropus DSM 2926] gi|309748265|gb|ADO82927.1| aspartate racemase [Ilyobacter polytropus DSM 2926] Length = 233 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 51/165 (30%), Gaps = 18/165 (10%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPA 130 L + ++ CNTA EL K+ ++ I + ST Sbjct: 70 LQVMGSDVIIMPCNTA-HYFYKELTEHLTIPFINMIEETAKEIKEIDPETKKIFLFSTQG 128 Query: 131 TLRRTYTSNLIHSYV-----SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 T + + +Y + + V + + G ++ K + Sbjct: 129 TYKAKIYDKVFENYGLEILRPEKSVQSVVT----DIIYSIKKGDTALKNIDKNILTSYIE 184 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 EGK +L CT P+ + + +D + +A+ A Sbjct: 185 SIEGKNI---ILGCTELPVAFD----ILGIKKNCIDPTKILAKSA 222 >gi|218663207|ref|ZP_03519137.1| aspartate racemase [Rhizobium etli IE4771] Length = 261 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 46/140 (32%), Gaps = 5/140 (3%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +RL + + + + C NT LI D++ + S+ + + ++ Sbjct: 84 RRLGEVAERLQAAGAGCILI--CTNTM-HLIADKVAAKI-SVPLIHIIDETAKSLHAAGR 139 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +L+T T+ + + + S + + + D ++++ Sbjct: 140 KRPLLLATRYTMEHGFYAERMKSLGLDIMVPDAADRTTVHDIIFNELCAGKVRDSSREKL 199 Query: 181 EGCFIEKEGKRTDVIVLACT 200 D I+L CT Sbjct: 200 IDIIDRAVEHGADSIILGCT 219 >gi|229178591|ref|ZP_04305955.1| hypothetical protein bcere0005_19490 [Bacillus cereus 172560W] gi|228604749|gb|EEK62206.1| hypothetical protein bcere0005_19490 [Bacillus cereus 172560W] Length = 231 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + I + + + ++V E G + + ++ + E Sbjct: 129 MEQDFYKSRIEENNIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYKRVIEELVQ 186 Query: 190 KRTDVIVLACT 200 K I+L CT Sbjct: 187 KGAQGIILGCT 197 >gi|302542803|ref|ZP_07295145.1| aspartate racemase [Streptomyces hygroscopicus ATCC 53653] gi|302460421|gb|EFL23514.1| aspartate racemase [Streptomyces himastatinicus ATCC 53653] Length = 257 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 33/112 (29%), Gaps = 15/112 (13%) Query: 46 DDVGFPYGNWEDHALKKRLMFLFSD------ILDKY-------QPVLSVIACNTAFTLIK 92 D P W D + R L L + L + CNTA Sbjct: 46 DQDHVPVVIWADPTIPDRTAALLDHGADPSPWLKRGAHYVALAGANLIAVPCNTAHAF-L 104 Query: 93 DELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS 143 +RS + L V ++ A + IL+T TL N + Sbjct: 105 GAVRSAAAPVPVLDMVAETAEEVARSQPGATVGILATTGTLTAELYQNALSR 156 >gi|294626042|ref|ZP_06704651.1| aspartate racemase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599644|gb|EFF43772.1| aspartate racemase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 234 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 2/123 (1%) Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ NT + D + + P + L A A I +L T T+ + + Sbjct: 81 DFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGISRIGLLGTRFTMEQPFY 138 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + + + RV + + E ++ + E I+L Sbjct: 139 RQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIKPESRQYVCQVMTELGQHGAQAIIL 198 Query: 198 ACT 200 CT Sbjct: 199 GCT 201 >gi|294635246|ref|ZP_06713748.1| putative aspartate racemase [Edwardsiella tarda ATCC 23685] gi|291091363|gb|EFE23924.1| putative aspartate racemase [Edwardsiella tarda ATCC 23685] Length = 316 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 42/130 (32%), Gaps = 6/130 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ VI CNTA ELR + + L V A + + I +L+T AT Sbjct: 148 LEQAGAECIVIPCNTA-HFWFKELRQSC-HVELLNIVEATMEEVCASGQQKIGLLATDAT 205 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASR-VEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 L I + C + G + + ++ + + Sbjct: 206 LYMGLYQQAIEARGLCCIRPDKPGQEQVMASIYALKAGDAARARAMMEQQAAALFARGAQ 265 Query: 191 RTDVIVLACT 200 VL CT Sbjct: 266 LI---VLGCT 272 >gi|91792733|ref|YP_562384.1| aspartate racemase [Shewanella denitrificans OS217] gi|91714735|gb|ABE54661.1| Aspartate racemase [Shewanella denitrificans OS217] Length = 233 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 1/101 (0%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159 ++ + A Q + +L T T+ + L + + I L Sbjct: 98 NIPLIHIADATAQQLILDGVRRVGLLGTQFTMAEDFYKGRLRDKFDIEVIIPDEEEQQLV 157 Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 +V + E +++ + + + ++L CT Sbjct: 158 HQVIYTELCQGVIRSESRQQYVAIIEKLQQQGAQAVILGCT 198 >gi|10567583|gb|AAG18488.1| glutamate racemase [Helicobacter pylori] Length = 76 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 8/76 (10%) Query: 198 ACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 CTH+PLI P P + + D+I + F Sbjct: 1 GCTHFPLIAQKIESYFMDHFALPTPPLLIHSGDAIVEYLQQ--KYTLKKNACAFPKVEFH 58 Query: 252 LSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 ASGDVVWLEKQAKEWL 74 >gi|325577164|ref|ZP_08147648.1| aspartate racemase [Haemophilus parainfluenzae ATCC 33392] gi|325160746|gb|EGC72867.1| aspartate racemase [Haemophilus parainfluenzae ATCC 33392] Length = 232 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 48/152 (31%), Gaps = 27/152 (17%) Query: 65 MFLFSDILDKYQPVL-------SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +IL + L V+A NT + ++ S+ FL + A A Sbjct: 57 WQRAGEILAEAGKKLEMIGAEGIVLATNTMHKVAPQIEQA--ISIPFLHILDATADAIKS 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI- 176 +++L T T+ + + + M + E +I DE+ Sbjct: 115 RGLNKVALLGTKFTMSDNFYRDGLQQR---------GIMPIVPIDETQNEIHRIIFDELC 165 Query: 177 --------KKEIEGCFIEKEGKRTDVIVLACT 200 K + + + + ++L CT Sbjct: 166 VGKFLPTSKAFYLKIIDKLKNQGAEGVILGCT 197 >gi|315649210|ref|ZP_07902300.1| aspartate racemase [Paenibacillus vortex V453] gi|315275429|gb|EFU38787.1| aspartate racemase [Paenibacillus vortex V453] Length = 236 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 52/149 (34%), Gaps = 6/149 (4%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 GNW++ R+M + L+ L VI NT + K+ S+ + + Sbjct: 55 GNWDEA---ARIMIDIAQKLETAGADLLVICTNTMHKMAKEV--EESVSIPLIHIADSTA 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 +++L T T+ + + L + + + ++ + + I Sbjct: 110 TRIVTDGIKKVALLGTAFTMEQDFYKGRLTEKFELEVIVPNEDDRLVIHDIIYQELCLGI 169 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 +E K+ + + I+L CT Sbjct: 170 ISEESKQTYLKIINHLIQQGAEGIILGCT 198 >gi|229190307|ref|ZP_04317308.1| hypothetical protein bcere0002_19750 [Bacillus cereus ATCC 10876] gi|228593091|gb|EEK50909.1| hypothetical protein bcere0002_19750 [Bacillus cereus ATCC 10876] Length = 231 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + I + + + ++V E G + + ++ + E Sbjct: 129 MEQDFYKSRIEENNIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYKRVIEELVQ 186 Query: 190 KRTDVIVLACT 200 K I+L CT Sbjct: 187 KGAQGIILGCT 197 >gi|48477221|ref|YP_022927.1| aspartate racemase [Picrophilus torridus DSM 9790] gi|48429869|gb|AAT42734.1| aspartate racemase [Picrophilus torridus DSM 9790] Length = 232 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 14/161 (8%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L+ +ACNTA + FL + + + +LST Sbjct: 69 KYLESIGIDTIGMACNTA----HIWFKEFVYKSNFLNMIDLTASVLKKSGFKNVLLLSTN 124 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 AT+ + + Y I V + +K+ + ++ +E I Sbjct: 125 ATVSSGIYTGKLRDYNINTVIPDQ------DIVMKSIHYVKVNDTKMARETIEPVINGHR 178 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 D ++LACT + V + + +D+ +++A Sbjct: 179 NEVDALLLACT----EMPVIISEKTYNIPVIDSDEALAAAL 215 >gi|163940018|ref|YP_001644902.1| aspartate racemase [Bacillus weihenstephanensis KBAB4] gi|163862215|gb|ABY43274.1| aspartate racemase [Bacillus weihenstephanensis KBAB4] Length = 232 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 4/130 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ ++ L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADATAKEINRKGIQSVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHL-VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + + I + + L + + + C KI ++ + E K Sbjct: 129 MEQDFYKSRIEENDIKVIVPLGKDREKINEVIYKELCLGKITSQS-REYYKRVIEELVQK 187 Query: 191 RTDVIVLACT 200 I+L CT Sbjct: 188 GAQGIILGCT 197 >gi|190575240|ref|YP_001973085.1| putative aspartate/glutamate racemase [Stenotrophomonas maltophilia K279a] gi|190013162|emb|CAQ46794.1| putative aspartate/glutamate racemase [Stenotrophomonas maltophilia K279a] Length = 230 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 39/130 (30%), Gaps = 3/130 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L L +I NT + ++ L QA + + +L T T Sbjct: 71 LQAGGADLLLICTNTM--HKLTDRIEAACTLPLLHIADPTAQAIVQAGARKVGLLGTAFT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + L + + + + + + + ++ G + Sbjct: 129 MEQDFYRGRLQDRFGLEVLVPEANDRRSVHDIIYQELIAGVVSEHSRQVYAGVIARLVAR 188 Query: 191 RTDVIVLACT 200 + I+L CT Sbjct: 189 GAEAIILGCT 198 >gi|228927293|ref|ZP_04090354.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832369|gb|EEM77945.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 232 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + + V E I + E K + I++ Sbjct: 129 MEQDFYKSRIEENHIKVVVTSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188 Query: 189 GKRTDVIVLACT 200 K +L CT Sbjct: 189 AKGI---ILGCT 197 >gi|229059895|ref|ZP_04197270.1| hypothetical protein bcere0026_20030 [Bacillus cereus AH603] gi|228719440|gb|EEL71043.1| hypothetical protein bcere0026_20030 [Bacillus cereus AH603] Length = 232 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 4/130 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ ++ L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADATAKEINRKGIQSVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHL-VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + + I + + L + + + C KI ++ + E K Sbjct: 129 MEQDFYKSRIEENDIKVIVPLGKDREKINEVIYKELCLGKITSQS-REYYKRVIEELVQK 187 Query: 191 RTDVIVLACT 200 I+L CT Sbjct: 188 GAQGIILGCT 197 >gi|229167064|ref|ZP_04294808.1| hypothetical protein bcere0007_20300 [Bacillus cereus AH621] gi|228616417|gb|EEK73498.1| hypothetical protein bcere0007_20300 [Bacillus cereus AH621] Length = 232 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 4/130 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ ++ L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADATAKEINRKGIQSVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHL-VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + + I + + L + + + C KI ++ + E K Sbjct: 129 MEQDFYKSRIEENDIKVIVPLGKDREKINEVIYKELCLGKITSQS-REYYKRVIEELVQK 187 Query: 191 RTDVIVLACT 200 I+L CT Sbjct: 188 GAQGIILGCT 197 >gi|262283680|ref|ZP_06061445.1| aspartate racemase [Streptococcus sp. 2_1_36FAA] gi|262260737|gb|EEY79438.1| aspartate racemase [Streptococcus sp. 2_1_36FAA] Length = 230 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ + L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQKKI-TIPILHIAQATAQALLADGIQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + + +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLT 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 180 IIDDLKKAGAEAVILGCT 197 >gi|322831851|ref|YP_004211878.1| aspartate racemase [Rahnella sp. Y9602] gi|321167052|gb|ADW72751.1| aspartate racemase [Rahnella sp. Y9602] Length = 232 Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 7/132 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + + V+ NT + D + L A I +L T T Sbjct: 71 LARAGAEVIVVCTNTMHKVADDI--ERIGGLPLLHIADATADKITGQGLHKIGLLGTRFT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + L + + + R+ EE G ++ + E + E Sbjct: 129 MEQDFYRGRLQEKHQIDVVTPDEADRAIVHRIIYEELCLGRIKEDS--RAEYRRIIGKLE 186 Query: 189 GKRTDVIVLACT 200 + + I+L CT Sbjct: 187 QQGVEGIILGCT 198 >gi|229017533|ref|ZP_04174433.1| hypothetical protein bcere0030_20860 [Bacillus cereus AH1273] gi|229023751|ref|ZP_04180240.1| hypothetical protein bcere0029_20840 [Bacillus cereus AH1272] gi|228737548|gb|EEL88055.1| hypothetical protein bcere0029_20840 [Bacillus cereus AH1272] gi|228743758|gb|EEL93860.1| hypothetical protein bcere0030_20860 [Bacillus cereus AH1273] Length = 236 Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 15/129 (11%), Positives = 42/129 (32%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K ++ NT + +++ S+ L A + + +L T T Sbjct: 71 LEKGGADFIIVCTNTM-HKVIKHIKNRI-SIPILHIADATAKEIKQQGIQSVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + I + + +++ + + ++ + + + Sbjct: 129 MEQDFYKLRIEENDIKVIVPTEEDRETVNKIIYNELCLGKINQQSREYFKSVMEDLVQRG 188 Query: 192 TDVIVLACT 200 I+L CT Sbjct: 189 AKGIILGCT 197 >gi|329888424|ref|ZP_08267022.1| aspartate racemase [Brevundimonas diminuta ATCC 11568] gi|328846980|gb|EGF96542.1| aspartate racemase [Brevundimonas diminuta ATCC 11568] Length = 220 Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 64/173 (36%), Gaps = 24/173 (13%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + + L + + CNTA +R+ + F+ + +AA T + Sbjct: 58 RTLGEMARALKAAGAQVLAMPCNTAHAHA-GAIRAA--GLPFIDMIAETAKAAGATGARR 114 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR-----VEEYACGIKIKEDEIK 177 + +L+TP + L ++ + +V+ LA R V + D+ + Sbjct: 115 VGVLATPG------AALLYAEALAAEGLEMVA-PSLAERERFMQVVFGVKAGDVGPDQ-R 166 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD--WLDNSDSIAR 228 + + ++ CT PL++ VD +D+++ +AR Sbjct: 167 AAMRDLAKALIAAGAEAVIGGCTEVPLLLDQ------GDVDAPLIDSAEVLAR 213 >gi|19910920|dbj|BAB87711.1| glutamate racemase [Helicobacter pylori] gi|19910922|dbj|BAB87712.1| glutamate racemase [Helicobacter pylori] Length = 75 Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 9/78 (11%) Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 CTH+PLI H + + D+I + + F Sbjct: 1 GCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQ---QKYALKNACAFPKVEFH 57 Query: 252 LSGKPDIAMRRLMQGFGL 269 SG ++ + L Sbjct: 58 ASGDVVWLEKQAKEWLAL 75 >gi|254470848|ref|ZP_05084251.1| aspartate racemase [Pseudovibrio sp. JE062] gi|211959990|gb|EEA95187.1| aspartate racemase [Pseudovibrio sp. JE062] Length = 212 Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 21/147 (14%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 L+ + L+ VI NT + ++ ++ F+ A + Sbjct: 36 LLKQAAHKLESAGADCIVICANTMHKVA-SYIQDGL-TIPFIHIAETTATAIQKVKRRKP 93 Query: 124 SILSTPATLRRTYTSNLIHSY----------VSQCHIHLVSSMILASRVEEYACGIKIKE 173 +L+T + + + Q +H ++ L C +I E Sbjct: 94 LLLATRYLMEHDFYVKRLEELHGMSVVVPDNGGQAVVHDIAYNEL--------CRGQINE 145 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACT 200 D ++ + + + + D ++L CT Sbjct: 146 DS-RRTLLQIVRKAQDQGADSVILGCT 171 >gi|254362765|ref|ZP_04978847.1| possible aspartate racemase [Mannheimia haemolytica PHL213] gi|153094394|gb|EDN75243.1| possible aspartate racemase [Mannheimia haemolytica PHL213] Length = 231 Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 64/199 (32%), Gaps = 37/199 (18%) Query: 46 DDVGFPYGNWEDHALKKRLMFLFS-------------DILDKYQPVLSVIACNTAFTLIK 92 D P + R ++ + + L+ +IACNTA Sbjct: 33 DQAHIPLLISSIPDIPDRTRYILANGENPAPVMEKYIEGLESAGATCIIIACNTA-HYWF 91 Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152 + L++ + L + + + +L+T ATL + + Sbjct: 92 EHLKAK-SQVEMLSMIDCVVDEVLKCGKWRVGLLATDATLAVDLYKKQL-----EAQGLT 145 Query: 153 VSSMILASRVEEYACGI-----KIKEDEIKKEIEGCFIEKEG---KRTDVIVLACTHYP- 203 E + +K E++K E +++ +VI+L CT P Sbjct: 146 FICPT-----ENGQKAVMDSIYLLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPI 200 Query: 204 LIVHVFRQLSPWPVDWLDN 222 ++ + P+ ++D+ Sbjct: 201 ILAQEIER---EPMRYVDS 216 >gi|319784854|ref|YP_004144330.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170742|gb|ADV14280.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 265 Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 8/172 (4%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLI 123 + L+ + CNTA D+L + + + A+ + + G + Sbjct: 69 LKAAVATLNALGVACVAMPCNTA-HHWYDQLAANSRA-EIIHIGDAVVAETRRSLERGRV 126 Query: 124 SILSTPATLRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++L+T TL + + + + + C I + + E E Sbjct: 127 AVLATQGTLVSGFYQDRMSAAGFELCLPSNTEFQACVDSAISLVKAGSIVDAAV--ETER 184 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + D +L CT ++ + + +D++ ++AR L Sbjct: 185 ALDIAQATGADAALLGCTELSVVAASLNDV--NGLVVIDSNAALARACLTRL 234 >gi|260550617|ref|ZP_05824826.1| hydantoin racemase [Acinetobacter sp. RUH2624] gi|260406328|gb|EEW99811.1| hydantoin racemase [Acinetobacter sp. RUH2624] Length = 244 Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 32/205 (15%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131 ++ +IAC R S +G A + A+Y +G S+++T T Sbjct: 65 EQLNVDAYIIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASYVSTG-FSVITTLQRT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + ++ +L H Y H + VEE I+ E + +E + Sbjct: 121 VNMSW--HLAHRY--GAHPFCKNVRACDIAVEELELPNSDAYRTIRDECKKALVEDKS-- 174 Query: 192 TDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 D IVL C + + V +D + ++A +L ++N +++ Sbjct: 175 -DAIVLGC------AGMSDLCLKLQNELG--VIVIDGVAAAVKQAE-MLVQLNLKTSKIG 224 Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270 D + P ++ GFG++ Sbjct: 225 D-----WASPPVKNYTGILSGFGMR 244 >gi|56698073|ref|YP_168444.1| Asp/Glu/Hydantoin racemase family protein [Ruegeria pomeroyi DSS-3] gi|56679810|gb|AAV96476.1| Asp/Glu/Hydantoin racemase family protein [Ruegeria pomeroyi DSS-3] Length = 248 Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 16/149 (10%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +VIA NT + +R M L A +A A T + +L T T Sbjct: 81 LQGAGCDFAVIASNTP-HVRLHAIRKGV-DMTILSIFDATARATAETGATRALVLGTAVT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ ++ + ++ + ++ L E A + + + + Sbjct: 139 MQARNYADALTAH----RVTANQTLPLEDIAEMQALIDEELNTGVSANARPRLLAYCDRH 194 Query: 192 TD---VIVLACTHYPLIVHVFRQLSPWPV 217 + I+LACT PL + P V Sbjct: 195 AEPGAAILLACTELPL-------IFPDHV 216 >gi|300819053|ref|ZP_07099256.1| aspartate racemase [Escherichia coli MS 107-1] gi|301328463|ref|ZP_07221533.1| aspartate racemase [Escherichia coli MS 78-1] gi|300528353|gb|EFK49415.1| aspartate racemase [Escherichia coli MS 107-1] gi|300845127|gb|EFK72887.1| aspartate racemase [Escherichia coli MS 78-1] Length = 229 Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 8/158 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VI CNTA EL+ + L + I +L+T AT Sbjct: 61 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIIDTTVDEVRVCGKTRIGLLATDAT 118 Query: 132 LRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 L I S + + + G ++ +E + Sbjct: 119 LYMGLYQKGIESLGFNYITPDADGQKNVMKSIYSLKAGNVTHAQKLMEEQAENLFSR--- 175 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++++L CT P+I+ + + P+ ++D++ S+ R Sbjct: 176 GAEILILGCTEIPIILS--QAVKDQPLRYIDSTASLVR 211 >gi|197251317|ref|YP_002149466.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197215020|gb|ACH52417.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 244 Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 + +L+T ATL + + A ++ + + Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 171 QALLLPQIDSLIARGAQTIIMGCT 194 >gi|197264432|ref|ZP_03164506.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197242687|gb|EDY25307.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 244 Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117 Query: 117 YTQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + +L+T ATL Y + ++ ++ + G K Sbjct: 118 -----HVGLLATNATLATGLYQKKALERGLTLIQPEEAGQALVMQAIYTLKRGDKTAAQA 172 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 173 L---LLPQIDSLIARGAQAIIMGCT 194 >gi|332363646|gb|EGJ41426.1| aspartate racemase [Streptococcus sanguinis SK49] Length = 230 Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 51/138 (36%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ + L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADVAKRLEQAGADFIVICTNTMHKVA-PQIQEQI-TIPILHIAQATAQALLADGIQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + +I +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGIIEVNRIIYDELCLGNIKESSKQTYLA 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 180 VIDDLKKVGAEAVILGCT 197 >gi|115436938|ref|XP_001217683.1| hypothetical protein ATEG_09061 [Aspergillus terreus NIH2624] gi|114188498|gb|EAU30198.1| hypothetical protein ATEG_09061 [Aspergillus terreus NIH2624] Length = 600 Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 39/137 (28%), Gaps = 20/137 (14%) Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYV-SQCH 149 LR + +G + A A +++T A R + + +Y Sbjct: 439 IRALREELTA-PVIGIMEASLYTARMV-GNRFGVVATSA--RSQVMHTDAVRNYGLEGFC 494 Query: 150 IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC----THYPLI 205 + + S + +E G + K + E K D + L C T + Sbjct: 495 VGVKSCGLGVLELEGKEEG------AVVKAMCRAARELVDKGADTLTLGCAGMTT----L 544 Query: 206 VHVFRQLSPWPVDWLDN 222 V +D Sbjct: 545 KTAVETAVGKDVQVIDG 561 >gi|170683881|ref|YP_001743167.1| aspartate racemase [Escherichia coli SMS-3-5] gi|301019514|ref|ZP_07183681.1| aspartate racemase [Escherichia coli MS 69-1] gi|170521599|gb|ACB19777.1| aspartate racemase [Escherichia coli SMS-3-5] gi|300399221|gb|EFJ82759.1| aspartate racemase [Escherichia coli MS 69-1] Length = 239 Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 8/158 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VI CNTA EL+ + L + I +L+T AT Sbjct: 71 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIIDTTVDEVRVCGKTRIGLLATDAT 128 Query: 132 LRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 L I S + + + G ++ +E + Sbjct: 129 LYMGLYQKGIESLGFNYITPDADGQKNVMKSIYSLKAGNVTHAQKLMEEQAENLFSR--- 185 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++++L CT P+I+ + + P+ ++D++ S+ R Sbjct: 186 GAEILILGCTEIPIILS--QAVKDQPLRYIDSTASLVR 221 >gi|283782953|ref|YP_003373707.1| aspartate racemase [Gardnerella vaginalis 409-05] gi|283441373|gb|ADB13839.1| aspartate racemase [Gardnerella vaginalis 409-05] Length = 242 Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 20/162 (12%) Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPA 130 V+ CNTA D+ ++ + + GAV + + ++ I L T Sbjct: 76 MGASFIVLTCNTA-HYFYDKFQA-LTDVPIIHMPRGAVAEVSKRYPKSKCNRIGFLGTAG 133 Query: 131 TLRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 + + I + + ++ V + + + Sbjct: 134 SRKAGVYQRAIEEAGYTFVAPDDDLQKRITSLIYDDV---KGTGNLNLRRYESVLSDMLD 190 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226 R D ++L CT L V + P + +D + ++ Sbjct: 191 PAGTCRCDALILGCT--EL--SVLNEAFPLPQIPLVD-AQAV 227 >gi|269797360|ref|YP_003311260.1| aspartate racemase [Veillonella parvula DSM 2008] gi|269093989|gb|ACZ23980.1| aspartate racemase [Veillonella parvula DSM 2008] Length = 231 Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 45/214 (21%) Query: 14 NSILIFDSGIGGLI---------VLQK-MRFLMPEYH----FIYVADDVGFPYGNWEDHA 59 +I + IGG+ VL + ++ ++ H +Y D Sbjct: 2 KTIGL----IGGMSWESTITYYQVLNETIKQVLGGLHSAKCILYSVD----------FEE 47 Query: 60 LKK--------RLMFLFSDI---LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108 ++K R + SD L+K VI NT + D++ + L Sbjct: 48 IEKCQANGDWDRSAEILSDAAQSLEKAGADYIVICTNTMHKVA-DKI-ERHIHIPLLHI- 104 Query: 109 PAIKQAAAYTQSG--LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166 A A +SG + +L T T+++ + ++ + I + L + + Sbjct: 105 -AEMTAVELEKSGITKVGLLGTKYTMQQDFYKCILENRGIHVVIPNEDQVELVNSIIYNE 163 Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + + +E K++ + ++L CT Sbjct: 164 LCLGVISNESKQQYLDIIGDLVKSGVQGVILGCT 197 >gi|228923509|ref|ZP_04086791.1| amino-acid racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836147|gb|EEM81506.1| amino-acid racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 235 Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V QA Sbjct: 68 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQAIPK 124 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + +++L+T AT++ + I I + + + + IK E E Sbjct: 125 N-TKRVALLATEATIQAGIYQDGIAKRN----IEYIYYEKWQTMINQIITYIKSGEVEEA 179 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + ++ACT Sbjct: 180 RKLWSALVVQLKDEVATAIIACT 202 >gi|332995767|gb|AEF05822.1| hypothetical protein ambt_21665 [Alteromonas sp. SN2] Length = 230 Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 5/102 (4%) Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILAS 160 + L A A + +L T T+ + + L + + ++ Sbjct: 99 IPLLHIADATGVALCENAVKKVGLLGTQFTMEQAFYSERLAQQFDLDVVVPNSDDRLVVH 158 Query: 161 RV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 ++ EE G+ ++ + + + + ++L CT Sbjct: 159 KIIYEELCKGVICEKS--RDAYIDIINKLKAQGAQAVILGCT 198 >gi|32265574|ref|NP_859606.1| aspartate racemase [Helicobacter hepaticus ATCC 51449] gi|32261622|gb|AAP76672.1| aspartate racemase [Helicobacter hepaticus ATCC 51449] Length = 241 Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 50/153 (32%), Gaps = 11/153 (7%) Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114 + K + + L + + CNTA + +++ P + L + + Sbjct: 64 KGEDFTKDYID--IAKRLQNFGAQTLCMCCNTA-HYSFETIKAALPQVKMLNLIESAVLK 120 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE- 173 + + + ++++ L+ + I + +V + C IK Sbjct: 121 VKQSGAKSVGLVASDGCLKGRVYERYFEKICPEVKIIY-PNAEFQKKVTQGICNIKNAHR 179 Query: 174 -DEIKKEIEGCFI-----EKEGKRTDVIVLACT 200 D + + I E D+I+L CT Sbjct: 180 FDTMDSKARPKNIFKQVCEHLLGGGDIILLGCT 212 >gi|218513623|ref|ZP_03510463.1| probable aspartate racemase protein [Rhizobium etli 8C-3] Length = 289 Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 18/181 (9%) Query: 24 GGLIVLQKMRFLMPEYHFIYV---ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 GGL + + + + + D G +RL + + Sbjct: 73 GGLASAEIILHSVNFEEIVALQKAGDWAGA----------ARRLGDAAERLQAAGAGCIL 122 Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 + C NT LI DE+ + S+ + + ++ +L+T T+ + Sbjct: 123 I--CTNTM-HLIADEVAAKV-SVPLIHIIDETAKSLQAAGRKRPLLLATRYTMEHGFYGE 178 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + S + + + D ++++ D I+L C Sbjct: 179 RMKSLGLDIMVPEAADRTTVHDIIFNELCAGRVHDRSREKLIDIIDRAVENGADSIILGC 238 Query: 200 T 200 T Sbjct: 239 T 239 >gi|326387882|ref|ZP_08209488.1| aspartate racemase [Novosphingobium nitrogenifigens DSM 19370] gi|326207928|gb|EGD58739.1| aspartate racemase [Novosphingobium nitrogenifigens DSM 19370] Length = 230 Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 45/147 (30%), Gaps = 10/147 (6%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 AL R++ + L + C NT +L + ++ L A Sbjct: 58 DALASRMVDAARRLETAGAEALLI--CTNTM--HRCADLIAANVAVPLLHIADPTGAAVR 113 Query: 117 YTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKE 173 + +L T T+ + + L + + + + RV EE G Sbjct: 114 AAGIERVGLLGTRFTMEQAFYRERLAERHGLDVIVPEDADRQIVHRVIYEELVAGRIEPR 173 Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACT 200 ++ G + I+L CT Sbjct: 174 S--REAYRGALARLAERGAQGIILGCT 198 >gi|229087301|ref|ZP_04219443.1| amino-acid racemase [Bacillus cereus Rock3-44] gi|228696003|gb|EEL48846.1| amino-acid racemase [Bacillus cereus Rock3-44] Length = 227 Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + + L+ + CNTA L D+L+++ +K+ Sbjct: 60 EQAIITGAQKLESTGVDFIAMPCNTA-HLYFDQLQNSVSVPVLNMVDETLKEI--PNHIK 116 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++L+T AT++ + I +IH S + + + IK E+ Sbjct: 117 RVALLATDATIQSGIYQDGIAKRDMD-YIHKNS---WQTTITQIISNIKTGNINKANELW 172 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + + D +++ACT ++V +P+ +D+S +A+ Sbjct: 173 YTLCTELSEAVDAVIVACT----DLNVLSNTAPYNYYLVDSSTCLAQAV 217 >gi|332296817|ref|YP_004438739.1| aspartate racemase [Treponema brennaborense DSM 12168] gi|332179920|gb|AEE15608.1| aspartate racemase [Treponema brennaborense DSM 12168] Length = 230 Score = 45.7 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 44/143 (30%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 + ++L L K ++ NT ++ ++S ++ + A +A Sbjct: 58 QTITEKLTEAALT-LQKGGADFILVGTNTMHKVV-PHVQSRV-AVPIIHIADATAEAIKV 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 +L T T+ + + I + + RV + + K Sbjct: 115 RNLTTAGLLGTRFTMSQDFIKTRIAQRGIGVVVPDGTDSAYIDRVIFDELCRGVVSRQSK 174 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 + + D ++L CT Sbjct: 175 NGYLAIIDKLAAQGADCVILGCT 197 >gi|23100846|ref|NP_694313.1| amino acid racemase [Oceanobacillus iheyensis HTE831] gi|22779080|dbj|BAC15347.1| amino acid racemase [Oceanobacillus iheyensis HTE831] Length = 231 Score = 45.7 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 43/132 (32%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K +I NT ++D S+ L A T I +L T T Sbjct: 71 LEKAGADFIIICTNTMHKTVEDI--EKAISIPILHIADATATKIKSTNINTIGLLGTTYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSM---ILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 ++ + N I S ++ + S L + E C I E K Sbjct: 129 MQHDFYKNRIKM--SGINVIIPDSDDINKLNKIIFEELCLGIINEQS-KAYYISVINNLM 185 Query: 189 GKRTDVIVLACT 200 + + I+ CT Sbjct: 186 NRGAEGIIFGCT 197 >gi|312866048|ref|ZP_07726269.1| Asp/Glu/Hydantoin racemase [Streptococcus downei F0415] gi|311098452|gb|EFQ56675.1| Asp/Glu/Hydantoin racemase [Streptococcus downei F0415] Length = 136 Score = 45.7 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 37/105 (35%), Gaps = 10/105 (9%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160 ++ + A +A G +++L T T+++ + + + + L+ Sbjct: 3 NIPLVHIADATAEALEEDNIGTVALLGTRYTMKQNFYKQKL--FDRGLTV-LIPEDEQVE 59 Query: 161 RV-----EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 V EE G + ++ + + K ++L CT Sbjct: 60 EVNRIIFEELCLGAIKDDS--RQYFAKVINQLKVKGAQAVILGCT 102 >gi|229172921|ref|ZP_04300474.1| hypothetical protein bcere0006_20280 [Bacillus cereus MM3] gi|228610544|gb|EEK67813.1| hypothetical protein bcere0006_20280 [Bacillus cereus MM3] Length = 237 Score = 45.7 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 10/141 (7%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L + +I NT ++ ++++ + L A + + Sbjct: 68 VLGNAAYSLQRGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTV 125 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY----ACGIKIKEDEIKKE 179 +L T T+ + + + I + + V S ++ E C KI ++ Sbjct: 126 GLLGTKYTMEQDFYKSRIEE--NDIKVI-VPSEKNREKINEVIYTELCLGKITSQS-REY 181 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 + E + I+L CT Sbjct: 182 YKRVIEELVQEGAQGIILGCT 202 >gi|295426126|ref|ZP_06818793.1| aspartate racemase [Lactobacillus amylolyticus DSM 11664] gi|295064162|gb|EFG55103.1| aspartate racemase [Lactobacillus amylolyticus DSM 11664] Length = 249 Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 50/132 (37%), Gaps = 9/132 (6%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPA 130 K P V+ CNTA ++L + + FL + K Y + I +++T Sbjct: 73 AKLNPDFFVMPCNTA-HYFYNDL-AALTDIPFLHMMRIAVHKFIEEYPKESKIGLIATEG 130 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--E 188 ++ + IH + + V + ++ ++ ++ ++K + Sbjct: 131 SIYDHLYEDEIHRVRREVE---FGGPEIQPMVTKLIYRDIKEKGIVEGKLYHQILQKMHD 187 Query: 189 GKRTDVIVLACT 200 +VI+L CT Sbjct: 188 DYGCNVILLGCT 199 >gi|293609488|ref|ZP_06691790.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827940|gb|EFF86303.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 229 Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 4/130 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K ++ NT + S+ FL A + G +++L T T Sbjct: 71 LEKAGADCILVCTNTMHKIAAQI--EDSISIPFLHIADATAKEILSQNIGKVALLGTAFT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + + Y I + + S + E C I D +K I + Sbjct: 129 MEQDFYKARLRDYGIDVVIPNEADRKIVHSIIYEELCLGVINPDSQQKYIA-IVERLIAE 187 Query: 191 RTDVIVLACT 200 I+L CT Sbjct: 188 GAQGIILGCT 197 >gi|228952564|ref|ZP_04114640.1| hypothetical protein bthur0006_19620 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807030|gb|EEM53573.1| hypothetical protein bthur0006_19620 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 231 Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + I + + + ++V E G + + ++ + E Sbjct: 129 MEQDFYKSRIEENNIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYKRGIEELVQ 186 Query: 190 KRTDVIVLACT 200 K I+L CT Sbjct: 187 KGAQGIILGCT 197 >gi|327488703|gb|EGF20503.1| aspartate racemase [Streptococcus sanguinis SK1058] Length = 230 Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 49/138 (35%), Gaps = 2/138 (1%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +L+ + L++ VI NT + +++ ++ L A QA Sbjct: 62 QLLADVAKRLEQAGADFIVICTNTMHKVA-PQIQEQI-AIPILHIAQATAQALLADGIQK 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + I + + +R+ + ++ K+ Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLT 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 180 IIDGLKKAGAEAVILGCT 197 >gi|86748272|ref|YP_484768.1| aspartate racemase [Rhodopseudomonas palustris HaA2] gi|86571300|gb|ABD05857.1| aspartate racemase [Rhodopseudomonas palustris HaA2] Length = 241 Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 19/149 (12%), Positives = 42/149 (28%), Gaps = 6/149 (4%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+W+ R++ + L +I NT + + + L + Sbjct: 56 GDWDGAT---RVLQKIARELQAAGADCVLICTNTM--HKLADAVQSAIDIPLLNIIDICA 110 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKI 171 Q + +L+T T+ + + + + V I Sbjct: 111 QELKQAGARKPLLLATRYTMEHDFYRERMRRRHGIETLVPEADDRSAVHDVIFTELCCGI 170 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 D ++ + D ++L CT Sbjct: 171 IRDASRQRYMEIIAKGRAAGADSVILGCT 199 >gi|19910930|dbj|BAB87718.1| glutamate racemase [Helicobacter pylori] Length = 76 Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 20/76 (26%), Gaps = 8/76 (10%) Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 CTH+PLI + + D+I + + F Sbjct: 1 GCTHFPLIAQKIESCFMEHFALSTPPLLIHSGDAIVKYLQQ--KYALKKNACAFPKVEFH 58 Query: 252 LSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 ASGDVVWLEKQAKEWL 74 >gi|325570019|ref|ZP_08145944.1| aspartate racemase [Enterococcus casseliflavus ATCC 12755] gi|325156847|gb|EGC69018.1| aspartate racemase [Enterococcus casseliflavus ATCC 12755] Length = 236 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 8/138 (5%) Query: 67 LFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 L DI + +P V+ CNTA DEL++ A K +G ++ Sbjct: 65 LMDDIEKQNLLKPNFIVLTCNTA-HYFFDELQAATEIEILHMPREAAKVVFEKGVTGKVA 123 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 L T +++ + + + + +V + D + +E+ Sbjct: 124 FLGTEGSVKAGIYEKELRQLGLDVY---LPEPAIQKKVNTLIYDRIKENDHLDQELYFEI 180 Query: 185 IEKEGKRT--DVIVLACT 200 +E+ +R + +VL CT Sbjct: 181 LEEVTERIGCESVVLGCT 198 >gi|319780912|ref|YP_004140388.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166800|gb|ADV10338.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 231 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 6/119 (5%) Query: 85 NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHS 143 NT L D+++++ S+ + A A ++L+T T+ + + L Sbjct: 84 NTMHKLA-DQVQASV-SIPLIHIADATAVAVKRAGMQRPALLATRFTMEQDFYKGRLADR 141 Query: 144 YVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + + + + RV EE C + E I + + D +++ CT Sbjct: 142 FGLDPVVPDAAGRDMVHRVIYEE-LCQGIVTETSKAAYIAETERLRREEAADSVIMGCT 199 >gi|170765513|ref|ZP_02900324.1| aspartate racemase [Escherichia albertii TW07627] gi|170124659|gb|EDS93590.1| aspartate racemase [Escherichia albertii TW07627] Length = 239 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 39/130 (30%), Gaps = 6/130 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VI CNTA EL+ + L V I +L+T AT Sbjct: 71 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIVETTINEVRDCGKTRIGLLATNAT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 L I S C S + G ++ E + Sbjct: 129 LYMGLYQKGIESLGLTCIRPDADSQKKVMESIYSLKAGDMTHAQQLMSEQAEILFSR--- 185 Query: 191 RTDVIVLACT 200 +V+VL CT Sbjct: 186 GAEVLVLGCT 195 >gi|62182935|ref|YP_219352.1| putative aspartate racemase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161617810|ref|YP_001591776.1| hypothetical protein SPAB_05674 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168464587|ref|ZP_02698490.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442279|ref|YP_002043753.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|198244578|ref|YP_002218382.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389289|ref|ZP_03215901.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|224586336|ref|YP_002640135.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62130568|gb|AAX68271.1| putative aspartate racemase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161367174|gb|ABX70942.1| hypothetical protein SPAB_05674 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194400942|gb|ACF61164.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195632992|gb|EDX51446.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197939094|gb|ACH76427.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199606387|gb|EDZ04932.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|224470864|gb|ACN48694.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322717439|gb|EFZ09010.1| putative aspartate racemase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326626189|gb|EGE32534.1| putative aspartate racemase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 244 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117 Query: 117 YTQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + +L+T ATL Y + ++ ++ + G K Sbjct: 118 -----HVGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRGDKTAAQA 172 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 173 L---LLPQIDSLIARGAQAIIMGCT 194 >gi|331005285|ref|ZP_08328675.1| aspartate racemase [gamma proteobacterium IMCC1989] gi|330420895|gb|EGG95171.1| aspartate racemase [gamma proteobacterium IMCC1989] Length = 231 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 44/140 (31%), Gaps = 3/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + +++ +I NT + S+ L A + Sbjct: 61 AAILADAAQKIERAGADFLLICTNTMHKVAPQI--ENAISIPILHIADATAETLVEKGIK 118 Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L T T+ + + L Y + H + + V + +++ K E Sbjct: 119 NVGLLGTAFTMEQDFYKGRLSEKYGLKVHTPNEADRAIVHNVIYQELCLGQVKEKSKLEY 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 179 LRIIAALAEQGAEAVILGCT 198 >gi|225023584|ref|ZP_03712776.1| hypothetical protein EIKCOROL_00443 [Eikenella corrodens ATCC 23834] gi|224943679|gb|EEG24888.1| hypothetical protein EIKCOROL_00443 [Eikenella corrodens ATCC 23834] Length = 235 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 46/138 (33%), Gaps = 4/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L++ ++A NT + + FL + ++ + + Sbjct: 63 ILAQAARTLEQAGADAVLLATNTMHKVAAPI--QAVIGVPFLHILDSVAERIRAQGIRTV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T++ + + + Q + + + E C E+ + ++ Sbjct: 121 GLLGTRFTMQDAFYREGLAARGIQAIVPDECVQAEIHRIIFEELCVGNFTENSRRFYVQA 180 Query: 183 CFIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 181 -IERLAAQGAQGIILGCT 197 >gi|332524847|ref|ZP_08401038.1| aspartate racemase [Rubrivivax benzoatilyticus JA2] gi|332108147|gb|EGJ09371.1| aspartate racemase [Rubrivivax benzoatilyticus JA2] Length = 238 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 40/128 (31%), Gaps = 2/128 (1%) Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 +I NT + + P L A +++L T T+ + + Sbjct: 77 DCLLICTNTMHKIAAQVAGESLP--PLLHIADVTGAAIRARGLRRVALLGTRYTMEQPFY 134 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + +C + R+ +++++ + + +VL Sbjct: 135 AEHLARLGVECIVPPEDERAEVHRIIFDELCRGQVLPASRQKLQLIVAALAARGAEGVVL 194 Query: 198 ACTHYPLI 205 CT PLI Sbjct: 195 GCTELPLI 202 >gi|52424069|ref|YP_087206.1| RacX protein [Mannheimia succiniciproducens MBEL55E] gi|52306121|gb|AAU36621.1| RacX protein [Mannheimia succiniciproducens MBEL55E] Length = 252 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 4/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + +L++ ++A NT + + + + S+ FL + A+ + + Sbjct: 85 ILAEQAKLLEQAGADGILLATNTMHKVARPIIDN--ISVPFLHILDAVADSIKAKGLNKV 142 Query: 124 SILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++L T T+ + + LI ++ + + + E C KI + K Sbjct: 143 ALLGTAFTMSDNFYRDGLIERGITPVVPDEETQKEIHRIIFEELCIGKI-LPQSKTFYLK 201 Query: 183 CFIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 202 TIEKLTALGAEGVILGCT 219 >gi|328480175|gb|EGF49117.1| aspartate racemase [Lactobacillus rhamnosus MTCC 5462] Length = 141 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 35/81 (43%), Gaps = 5/81 (6%) Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +++T T++ S+ I + + + L V E ++ E+ E+ Sbjct: 13 RIGLIATQGTIKDGIYSHEIE--NTGRKVI-LGDQALQDMVTELIYKYVKEKGEVNAELY 69 Query: 182 GCFIEK--EGKRTDVIVLACT 200 +++ + + +VIVL CT Sbjct: 70 HRILKRMHDDFQVNVIVLGCT 90 >gi|241762008|ref|ZP_04760092.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373474|gb|EER63061.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 232 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 57/155 (36%), Gaps = 8/155 (5%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIA--CNTAFTLIKDELRSTFPSMAFLGAVPAI 111 + + L LM ++++ VIA NT ++ D+L+ + + V A Sbjct: 54 DKDYTKLTTYLMHGVNNLIAAGAD---VIALTGNTP-HIVFDDLQKQ-SDVPLISIVEAT 108 Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 + +L T T+ + LI + +S +A++++ Sbjct: 109 CDEVKRQNITKVGLLGTRFTMEADFFKKPLIANGMSVITPQPKEIDYIANKIDSELEKGI 168 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 ++ + + I ++ I+L CT PL+ Sbjct: 169 FSQNTLSEFISIISRMRDSDGIKAIILGCTELPLL 203 >gi|296114812|ref|ZP_06833461.1| aspartate racemase [Gluconacetobacter hansenii ATCC 23769] gi|295978626|gb|EFG85355.1| aspartate racemase [Gluconacetobacter hansenii ATCC 23769] Length = 232 Score = 45.3 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 16/133 (12%) Query: 84 CNTAF------TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 CN ++ D LR+ S+ + + A ++ A + +L T T+ + Sbjct: 76 CNIISLTGNTPHIVFDTLRTK-SSVPLVSIIEATQKEAKKLGYKKVGLLGTRFTMEEDFF 134 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-----RT 192 + + +++ IK+E + F++ Sbjct: 135 KKPFQEEKIEIFSPQGEDLDFV----ADKISHELEHGIIKEETKCGFLKVIENMIHTYDI 190 Query: 193 DVIVLACTHYPLI 205 + I+L CT PLI Sbjct: 191 EAIILGCTELPLI 203 >gi|317484405|ref|ZP_07943320.1| aspartate racemase [Bilophila wadsworthia 3_1_6] gi|316924324|gb|EFV45495.1| aspartate racemase [Bilophila wadsworthia 3_1_6] Length = 255 Score = 45.3 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 19/154 (12%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAVPAIKQAAA 116 + + + + V+ V CNTA + + L P F+ + ++ Sbjct: 67 EAIGEIMVRMAKAGATVIGV-PCNTAHSPRIMDVAVAMLHEASPKTRFVHMIDSVVAFIR 125 Query: 117 YT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY----ACGIK 170 + + I +LST T + + + + L RV++ A GIK Sbjct: 126 ESLPHARKIGVLSTKGTYATGLYQDALSAAG---FVPLFPDEEGRERVQQAISNTAYGIK 182 Query: 171 IKEDEIKKEIEGCFI----EKEGKRTDVIVLACT 200 + + + E + + + D ++L CT Sbjct: 183 AQSNPVTPEARAALLAEAEKLVEQGADAVILGCT 216 >gi|323526636|ref|YP_004228789.1| aspartate racemase [Burkholderia sp. CCGE1001] gi|323383638|gb|ADX55729.1| aspartate racemase [Burkholderia sp. CCGE1001] Length = 232 Score = 45.3 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 45/134 (33%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L++ L ++A NT + + + + FL A + +L Sbjct: 67 AARQLERGGAELVMLATNTM-HRVYESI-ERAIHVPFLHIADPTGSALRKAGVERVGLLG 124 Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ +T YT L Y + + + R+ + E + + Sbjct: 125 TRYTMEQTFYTGRLRERYGLETLVPDEAQRADVHRIIYDELCHGNVKSESRMVYQTVIES 184 Query: 187 KEGKRTDVIVLACT 200 + + ++L CT Sbjct: 185 LRARGAEAVILGCT 198 >gi|325122763|gb|ADY82286.1| aspartate racemase [Acinetobacter calcoaceticus PHEA-2] Length = 250 Score = 45.3 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 7/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 L ++ + V C NT + ++ FL A + Sbjct: 62 AYLAEQAQNLEKAGANCILV--CTNTMHKVAAQI--EDSITVPFLHIADATAKEILSQNI 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179 G +++L T T+ + + + Y I + + S + E C I D +K Sbjct: 118 GKVALLGTAFTMEQDFYKARLQDYGIDVVIPNEADRKIVHSIIYEELCLGVINPDSQQKY 177 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 I + I+L CT Sbjct: 178 IA-IVERLIAEGAQGIILGCT 197 >gi|121611642|ref|YP_999449.1| aspartate racemase [Verminephrobacter eiseniae EF01-2] gi|121556282|gb|ABM60431.1| aspartate racemase [Verminephrobacter eiseniae EF01-2] Length = 246 Score = 45.3 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 25/141 (17%) Query: 72 LDKYQPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L IACNTA L+ FP + L Q+ A + +++++T Sbjct: 84 LAALGSRAVAIACNTA--HAWHANLQERFPQVELLHIARETAQSLAAQGATEVALMATEG 141 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-----------E 179 T R + CH+ +E ++ D +K E Sbjct: 142 TYRVRLYEQALAEAGLGCHV---------PLADERQTIMRGIFDGVKAGNMPLAGQCFSE 192 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 + E+ G I++ CT Sbjct: 193 VALRLAERHGSV--TIIMGCT 211 >gi|49477550|ref|YP_036336.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196039710|ref|ZP_03107014.1| aspartate racemase family protein [Bacillus cereus NVH0597-99] gi|218903367|ref|YP_002451201.1| aspartate racemase family protein [Bacillus cereus AH820] gi|228914826|ref|ZP_04078435.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228933529|ref|ZP_04096380.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|49329106|gb|AAT59752.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196029413|gb|EDX68016.1| aspartate racemase family protein [Bacillus cereus NVH0597-99] gi|218534989|gb|ACK87387.1| aspartate racemase family protein [Bacillus cereus AH820] gi|228826127|gb|EEM71909.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228845145|gb|EEM90187.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 232 Score = 44.9 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + + V E I + E K + I++ Sbjct: 129 MEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188 Query: 189 GKRTDVIVLACT 200 K +L CT Sbjct: 189 AKGI---ILGCT 197 >gi|294102242|ref|YP_003554100.1| aspartate racemase [Aminobacterium colombiense DSM 12261] gi|293617222|gb|ADE57376.1| aspartate racemase [Aminobacterium colombiense DSM 12261] Length = 228 Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 50/237 (21%) Query: 12 LQNSILIFDSGIGGLI------VLQKMRFLM---------PE-----YHFIYVADDVGFP 51 ++ SI I +GG+ + + L PE F Y D Sbjct: 1 MKKSIGI----LGGISLASTIQYYKTITDLYYERNKDYYYPEMVIKSLDFQYFTDLEN-- 54 Query: 52 YGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI 111 ++ L+ +++A N+ ++ D++ Sbjct: 55 --ERRTEEYIDYIVKGI-KSLESAGADFAIMAANSPHSV-FDKVVEKVELPIISIVETTA 110 Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV------SQCHIHLVSSMILASRVEEY 165 K+A + + T++ + + + Y ++ H ++S+I V Sbjct: 111 KKAVELN-LKKVLLTGIKYTMQGRFYQDGLEKYDIEVITPTENHQDEINSIIFQELV--I 167 Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 + + + I + ++L CT PL+++ ++ + LD Sbjct: 168 NRFSEKTRSRMLEIISSY-------NVEGVILGCTELPLLLN--QEH--SHLKLLDT 213 >gi|229091216|ref|ZP_04222436.1| Aspartate racemase [Bacillus cereus Rock3-42] gi|228692114|gb|EEL45853.1| Aspartate racemase [Bacillus cereus Rock3-42] Length = 232 Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + + V E I + E K + I++ Sbjct: 129 MEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188 Query: 189 GKRTDVIVLACT 200 K +L CT Sbjct: 189 AKGI---ILGCT 197 >gi|153007895|ref|YP_001369110.1| aspartate racemase [Ochrobactrum anthropi ATCC 49188] gi|151559783|gb|ABS13281.1| aspartate racemase [Ochrobactrum anthropi ATCC 49188] Length = 230 Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 42/139 (30%), Gaps = 3/139 (2%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 RLM + L+K +I NT + D S+ + + Sbjct: 62 RLMIEAAQNLEKGGADFILICTNTMHKMAADV--ENATSIPLVHIADPTAEKIKAAGLSK 119 Query: 123 ISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T+ + + L+ + + + + + D +++ Sbjct: 120 VGLLGTAFTMEQDFYKGRLVAKHGLEVLTPDDADRKTVHDIIYQELVVGEIRDASREKYR 179 Query: 182 GCFIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 180 AVINRLVERGARAIILGCT 198 >gi|149180603|ref|ZP_01859107.1| aspartate racemase [Bacillus sp. SG-1] gi|148851756|gb|EDL65902.1| aspartate racemase [Bacillus sp. SG-1] Length = 231 Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 14/135 (10%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K ++ NT +I +L S S+ L A + +L T T Sbjct: 71 LEKAGADFIILCTNTMHKVI--DLISEHISIPVLHIADAAAVHIRSQGIKSVGLLGTRYT 128 Query: 132 LRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 + + + + + + ++++I G E ++ ++ Sbjct: 129 MEQDFYKERLRMNGIEVVVPDGKEREKINTIIFDELCVGRIEG------ESREYMKDIIE 182 Query: 186 EKEGKRTDVIVLACT 200 + K + IVL CT Sbjct: 183 SLQTKGAEGIVLGCT 197 >gi|331655439|ref|ZP_08356434.1| aspartate racemase subfamily [Escherichia coli M718] gi|331046871|gb|EGI18953.1| aspartate racemase subfamily [Escherichia coli M718] Length = 239 Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 8/158 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VI CNTA EL+ + L + I +L+T AT Sbjct: 71 LEDAGAECIVIPCNTA-HYWFTELKDAC-HIDILSIIDTTVDEVRVCGKTRIGLLATDAT 128 Query: 132 LRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 L I S + + + G ++ +E + Sbjct: 129 LYMGLYQKGIESLGFNYITPDADGQKNVMKSIYSLKAGNVTHAQKLMEEQAENLFSR--- 185 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 ++++L CT P+I+ + + P+ ++D++ S+ R Sbjct: 186 GAEILILGCTEIPIILS--QAVKDQPLRYIDSTASLVR 221 >gi|171742533|ref|ZP_02918340.1| hypothetical protein BIFDEN_01646 [Bifidobacterium dentium ATCC 27678] gi|283456381|ref|YP_003360945.1| aspartate racemase [Bifidobacterium dentium Bd1] gi|306822446|ref|ZP_07455824.1| aspartate racemase [Bifidobacterium dentium ATCC 27679] gi|309802470|ref|ZP_07696576.1| aspartate racemase [Bifidobacterium dentium JCVIHMP022] gi|171278147|gb|EDT45808.1| hypothetical protein BIFDEN_01646 [Bifidobacterium dentium ATCC 27678] gi|283103015|gb|ADB10121.1| aspartate racemase [Bifidobacterium dentium Bd1] gi|304553991|gb|EFM41900.1| aspartate racemase [Bifidobacterium dentium ATCC 27679] gi|308220870|gb|EFO77176.1| aspartate racemase [Bifidobacterium dentium JCVIHMP022] Length = 240 Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 57/174 (32%), Gaps = 25/174 (14%) Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPA 130 V+ CNTA D+ + + L GAV + Q + I L T Sbjct: 76 MGASFIVLTCNTA-HYFYDDFQ-RLTPVPILHMPRGAVNRMAQRYPKERFPRIGFLGTSG 133 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRV-----EEYACGIKIKEDEIKKEIEGCFI 185 + + + + + + L R+ ++ ++ ++ + + Sbjct: 134 SRKSGVYARA-ATEAGYAFVE--PTDDLQERITSLIYDDVKGSGELNQERYESVLRDMLD 190 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI-----ARRARCL 233 D ++L CT L V + P + +D + ++ RA+ L Sbjct: 191 PAGPCACDALILGCT--EL--SVLNEAFPMPQLPIID-AQAVLVEDTVARAKSL 239 >gi|225864203|ref|YP_002749581.1| aspartate racemase family protein [Bacillus cereus 03BB102] gi|225788860|gb|ACO29077.1| aspartate racemase family protein [Bacillus cereus 03BB102] Length = 232 Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + + V E I + E K + I++ Sbjct: 129 MEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188 Query: 189 GKRTDVIVLACT 200 K +L CT Sbjct: 189 AKGI---ILGCT 197 >gi|254460741|ref|ZP_05074157.1| hydantoin racemase [Rhodobacterales bacterium HTCC2083] gi|206677330|gb|EDZ41817.1| hydantoin racemase [Rhodobacteraceae bacterium HTCC2083] Length = 227 Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 19/176 (10%) Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH---ALKKRLMFLFSDILDKYQPVLSVIA 83 V + + P+ I G + + L ++ VIA Sbjct: 20 TVARAVAR--PDTEII----AASSHDGPASIQGFLDVATCVPELLKEVAQHKDVDAIVIA 73 Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS 143 C D +R T S+ LG A AA+ + S+++T + +NL+ Sbjct: 74 C--FDDTGLDAVR-TLMSVPVLGIGEAAYHAASMIANK-FSVITTLSRSVPGLENNLMRY 129 Query: 144 YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 ++Q + ++ I ++EE G D+I+ I + + IVL C Sbjct: 130 GLAQKCSRVRATEIPVLKLEE---GDPATLDKIRSAIRASI---DEDNAEAIVLGC 179 >gi|221133453|ref|ZP_03559758.1| hypothetical protein GHTCC_00865 [Glaciecola sp. HTCC2999] Length = 230 Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 7/132 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + VI NT L D ++ L A QA + +L T T Sbjct: 71 LAQAGADSIVICTNTMHKLAPDIAAQV--NIPLLHIADATGQALVEQGIKQVGLLGTRFT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + L++ Y + + ++ EE G + + + + Sbjct: 129 MEQDFYASRLLNKYGIEVITPDQTGRDAVHQIIYEELCLGHIHTQS--RSIYQHVVAKLA 186 Query: 189 GKRTDVIVLACT 200 + ++L CT Sbjct: 187 DQGAQAVILGCT 198 >gi|302384307|ref|YP_003820130.1| aspartate racemase [Brevundimonas subvibrioides ATCC 15264] gi|302194935|gb|ADL02507.1| aspartate racemase [Brevundimonas subvibrioides ATCC 15264] Length = 223 Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 24/155 (15%) Query: 81 VIA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 V+A CNTA + + + F+ + A A + + IL+TP Sbjct: 74 VLAMPCNTAHAQKAGIVAA---GLPFIDMIAATVAAVGGHDARAVGILATPG--GEALYR 128 Query: 139 NLIHSYVSQCHIHLV------SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + L+ + M V+ G + E+ Sbjct: 129 PALE--AEGIKPVLLQGGDREAFMACVYGVKRGDTG-----AANRAEMARLAQALTVAGA 181 Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 D I+ CT PL++ S V +D+++ +A Sbjct: 182 DAIIAGCTEVPLLLD----ASDVSVPLVDSAEVLA 212 >gi|10121332|gb|AAG13132.1| glutamate racemase [Helicobacter pylori] Length = 76 Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 8/76 (10%) Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 CTH+PLI + + D+I + F Sbjct: 1 GCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFPKVEFH 58 Query: 252 LSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 ASGDVIWLEKQAKEWL 74 >gi|299530163|ref|ZP_07043589.1| aspartate racemase [Comamonas testosteroni S44] gi|298721820|gb|EFI62751.1| aspartate racemase [Comamonas testosteroni S44] Length = 235 Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%) Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114 E L ++ L + + NT ++ L + + A+ A A Sbjct: 59 REFDQLADYVLGAIH-CLAAGGADMVGLTGNTPNIVLDRILP--LSPIPIVSAIDATCNA 115 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR----VEEYACGIK 170 A + + +L T T+ T+ + V +R +E Sbjct: 116 AKERGAQRVGLLGTVFTMTNTFFKTPFE--DRGIQVI-VPCEHQIARIQAKIEAELEHGL 172 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 +KE+ ++ + ++ + D + LACT PLI Sbjct: 173 VKENTRQEFVAIIQDLQQREGIDHVALACTELPLI 207 >gi|289665269|ref|ZP_06486850.1| putative racemase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668900|ref|ZP_06489975.1| putative racemase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 234 Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 2/123 (1%) Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ NT + D + S P + L A + +L T T+ + + Sbjct: 81 DFIVLCTNTMHCVA-DAITSATP-LPLLHIADVTADALVAAGINRVGLLGTRFTMEQPFY 138 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + + RV + + E + + + I+L Sbjct: 139 RARLQPRGLDVLVPPADAREELHRVIYNELCQGVIKPESRAYVRQVMADLGQHGAQAIIL 198 Query: 198 ACT 200 CT Sbjct: 199 GCT 201 >gi|205355237|ref|YP_002229038.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205275018|emb|CAR40102.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326630400|gb|EGE36743.1| putative aspartate racemase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 240 Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 58 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 113 Query: 117 YTQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + +L+T ATL Y + ++ ++ + G K Sbjct: 114 -----HVGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRGDKTVAQA 168 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 169 L---LLPQIDSLIARGAQAIIMGCT 190 >gi|319901947|ref|YP_004161675.1| aspartate racemase [Bacteroides helcogenes P 36-108] gi|319416978|gb|ADV44089.1| aspartate racemase [Bacteroides helcogenes P 36-108] Length = 239 Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 55/183 (30%), Gaps = 29/183 (15%) Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114 + + + L K + CNTA DEL + F+ + + + Sbjct: 56 KGESFISDYVN--IGKKLKKMGCTELCMCCNTA-HYAIDELSQK-TDLPFINIIDEVARR 111 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---- 170 + ++ T + Y S + + + V + C K Sbjct: 112 SDEMGIKKALVMCTAGLRKYKLYERSFEKYASSTEVVY-PNDEIQEWVTKGICNAKNIYR 170 Query: 171 --IKEDEIK------KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDW 219 +E E++ +++ +I D I+ CT + V++ Sbjct: 171 FANRETEVEHPANWFQKVCDYYI--NTSDIDCIIGGCT-------DISNVFQLNSSKVEY 221 Query: 220 LDN 222 +D+ Sbjct: 222 IDS 224 >gi|19910928|dbj|BAB87716.1| glutamate racemase [Helicobacter pylori] Length = 76 Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 8/76 (10%) Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 CTH+PLI + + D+I + F Sbjct: 1 GCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPKVEFR 58 Query: 252 LSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 ASGDVVWLEKQAKEWL 74 >gi|91784270|ref|YP_559476.1| aspartate racemase [Burkholderia xenovorans LB400] gi|91688224|gb|ABE31424.1| Aspartate racemase [Burkholderia xenovorans LB400] Length = 232 Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 3/139 (2%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R M + L++ L ++A NT + + + + + FL A Sbjct: 62 RQMADAARQLERGGADLVMLATNTM-HRVYESIEAAI-DVPFLHIADPTGNALRAAGVER 119 Query: 123 ISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L T T+ +T YT L Y + + R+ + + Sbjct: 120 VGLLGTRYTMEQTFYTGRLRERYGLTTLVPDEAERADVHRIIYDELCHGKVNGASRAVYQ 179 Query: 182 GCFIEKEGKRTDVIVLACT 200 + ++L CT Sbjct: 180 RVIEALAARGAQAVILGCT 198 >gi|157375863|ref|YP_001474463.1| hypothetical protein Ssed_2728 [Shewanella sediminis HAW-EB3] gi|157318237|gb|ABV37335.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3] Length = 230 Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 5/103 (4%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159 S+ L A + + +L T T+ + + L + + I + Sbjct: 98 SIPLLHIADATAEQLVSDGVKKVGLLGTQFTMEQEFYRGRLTDRFGIEVVIPDSAQRERV 157 Query: 160 SRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 ++ EE G ++ + + + + ++L CT Sbjct: 158 HQIIYEELCQGQVNTTS--REAYLAIIQDLQAQGAEAVILGCT 198 >gi|257126498|ref|YP_003164612.1| aspartate racemase [Leptotrichia buccalis C-1013-b] gi|257050437|gb|ACV39621.1| aspartate racemase [Leptotrichia buccalis C-1013-b] Length = 231 Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 54/148 (36%), Gaps = 9/148 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 ++ ++ L+K VI NT ++ ++++ S+ L + Sbjct: 60 EKSGE-----ILGEAANNLEKAGADFIVICTNTMHKVV-NQIKEKI-SIPILHIAEMTAE 112 Query: 114 AAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 I++L T T+ + + LI ++ I+ + + C I Sbjct: 113 KILEKGLKNIALLGTKYTMEQDFYKSKLIEKGINVIIPDKNDIEIINKIIYDELCLGIIN 172 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + KK +E + + K + I+L CT Sbjct: 173 SNSKKKFLE-IVDKLKNKGAEGIILGCT 199 >gi|187924576|ref|YP_001896218.1| aspartate racemase [Burkholderia phytofirmans PsJN] gi|187715770|gb|ACD16994.1| aspartate racemase [Burkholderia phytofirmans PsJN] Length = 232 Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L++ L ++A NT + + + + + FL A + +L Sbjct: 67 AARQLERGGADLVMLATNTM-HRVYESIEAAI-DVPFLHIADPTGSALRAAGIERVGLLG 124 Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ +T YT L Y + I + R+ D + + Sbjct: 125 TRYTMEQTFYTGRLRERYGLETVIPDEAERADVHRIIYDELCHGNVNDASRAVYQRVIEA 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAARGAQAVILGCT 198 >gi|159901071|ref|YP_001547318.1| aspartate racemase [Herpetosiphon aurantiacus ATCC 23779] gi|159894110|gb|ABX07190.1| aspartate racemase [Herpetosiphon aurantiacus ATCC 23779] Length = 231 Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 39/148 (26%), Gaps = 13/148 (8%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQA 114 ++ + L V+ NT A + + F+ V A Sbjct: 58 ETAGEILAQAARNLVAAGAECIVLCTNTMHLVATAI------EQAVEVPFIHIVDPTAAA 111 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIK 172 Q I +L T T+ + + + + + + + C KI Sbjct: 112 IQQQQLTTIGLLGTRFTMEHDFYAGRLRQRYGLAVVTPEPEQRDEIHRIIFDELCLGKID 171 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200 K + I+L CT Sbjct: 172 ASS-KTYYLAVINDLVAAGAQGIILGCT 198 >gi|150018009|ref|YP_001310263.1| aspartate racemase [Clostridium beijerinckii NCIMB 8052] gi|149904474|gb|ABR35307.1| aspartate racemase [Clostridium beijerinckii NCIMB 8052] Length = 229 Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 2/142 (1%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + +++ + L+K VI NT + D+++ S+ L Q Sbjct: 58 EVSAQILSEAALTLEKAGADFIVICTNTMHKVA-DKVQEAI-SIPILHIAEVTAQVLKAE 115 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 I++L T T+ + + + + + I + + + + I K+ Sbjct: 116 NITKIALLGTKYTMEQDFYKSKLIEDGIRVLIPDKEDIETVNEIIYNELCVGIISKHSKE 175 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 + K ++L CT Sbjct: 176 VYLNIIDKLTNKGAQGVILGCT 197 >gi|325121892|gb|ADY81415.1| hydantoin racemase [Acinetobacter calcoaceticus PHEA-2] Length = 244 Score = 44.5 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 73/206 (35%), Gaps = 34/206 (16%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131 ++ +IAC R S +G A + A+Y +G S+++T T Sbjct: 65 EQLNVDAYIIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASYISTG-FSVVTTLQRT 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + ++ +L H Y + V + I VEE ++ E + E + Sbjct: 121 VNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRIVRDECKKALAEDKS- 174 Query: 191 RTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244 D IVL C + + V +D + A + +L ++N ++V Sbjct: 175 --DTIVLGC------AGMSDLCLKLQNELG--VIVID-GVAAAVKLAEMLVQLNLKTSKV 223 Query: 245 FDDHALFLSGKPDIAMRRLMQGFGLK 270 D + P ++ GFG+ Sbjct: 224 GD-----WASPPVKNYTGILSGFGMN 244 >gi|254722213|ref|ZP_05184001.1| aspartate racemase family protein [Bacillus anthracis str. A1055] Length = 235 Score = 44.5 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 8/140 (5%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L K +I NT ++ ++++ + L A + + Sbjct: 63 ILENAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180 +L T T+ + + + I + + + E I + E K + Sbjct: 121 GLLGTKYTMEQDFYKSRIEENHIKVVVPSEKDRDKVNEAIYTELCLGKITSQSREYYKRV 180 Query: 181 EGCFIEKEGKRTDVIVLACT 200 I++ K +L CT Sbjct: 181 IENLIQEGAKGI---ILGCT 197 >gi|327189413|gb|EGE56580.1| putative hydantoin racemase protein [Rhizobium etli CNPAF512] Length = 247 Score = 44.5 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 64/173 (36%), Gaps = 23/173 (13%) Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123 L +++ ++ +VIAC + RS F + LG AI A+ Q + Sbjct: 57 LLAELKERQAAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAIVTASFLAQRFTV 113 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 T R NL+ Y + +S I +E+ A G +++ EIE Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGARAKVRASDIPVLELEDAASGAI---GKLRAEIERA 167 Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 E + IVL C T + +++ V +D + ++A L Sbjct: 168 LEE---DGAEAIVLGCAGMT---DLARQLQEIYG--VPVVDGVSAAVKQAEAL 212 >gi|190892490|ref|YP_001979032.1| aspartate racemase [Rhizobium etli CIAT 652] gi|190697769|gb|ACE91854.1| probable aspartate racemase protein [Rhizobium etli CIAT 652] Length = 239 Score = 44.5 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 18/181 (9%) Query: 24 GGLIVLQKMRFLMPEYHFIYV---ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 GGL + + + + + D G +RL + + Sbjct: 31 GGLASAEIILHSVNFEEIVALQKAGDWAGA----------ARRLGDAAERLQAAGAGCIL 80 Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 + C NT LI DE+ + S+ + + ++ +L+T T+ + Sbjct: 81 I--CTNTM-HLIADEVAAKV-SVPLIHIIDETAKSLQAAGRKRPLLLATRYTMEHGFYGE 136 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + S + + + D ++++ D I+L C Sbjct: 137 RMKSLGLDIMVPEAADRTTVHDIIFNELCAGRVHDRSREKLIDIIDRAVENGADSIILGC 196 Query: 200 T 200 T Sbjct: 197 T 197 >gi|323698465|ref|ZP_08110377.1| aspartate racemase [Desulfovibrio sp. ND132] gi|323458397|gb|EGB14262.1| aspartate racemase [Desulfovibrio desulfuricans ND132] Length = 229 Score = 44.5 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 51/158 (32%), Gaps = 17/158 (10%) Query: 45 ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF 104 D G GN + + L+ L VI NT + + S+ Sbjct: 55 GDWAGV--GNR---------LADAARTLESAGAELMVIGTNTMHKVADRVAEAV--SVPL 101 Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV-- 162 + A +AA +++L T T+ + + + + + L RV Sbjct: 102 VHIADATAEAARAGGYARVALLGTIFTMEDDFYVGRLQDHGFEVLVPEAGDRKLVDRVIF 161 Query: 163 EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 +E G + + E E + + ++L CT Sbjct: 162 DELCRGEFLDGS--RAEFLRIIEELAARGAEAVILGCT 197 >gi|301053755|ref|YP_003791966.1| aspartate racemase family protein RacD [Bacillus anthracis CI] gi|300375924|gb|ADK04828.1| aspartate racemase family protein RacD [Bacillus cereus biovar anthracis str. CI] Length = 232 Score = 44.5 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 41/129 (31%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + I + + + V + + ++ + + Sbjct: 129 MEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188 Query: 192 TDVIVLACT 200 I+L CT Sbjct: 189 AKAIILGCT 197 >gi|190892645|ref|YP_001979187.1| hydantoin racemase [Rhizobium etli CIAT 652] gi|190697924|gb|ACE92009.1| probable hydantoin racemase protein [Rhizobium etli CIAT 652] Length = 247 Score = 44.5 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 23/173 (13%) Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123 L S++ ++ +VIAC + RS F + LG AI A+ Q + Sbjct: 57 LLSELKERQAAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAIVTASFLAQRFTV 113 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 T R NL+ Y + +S I +EE A G +++ EIE Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGARAKVRASDIPVLELEEAASGAI---GKLRAEIERA 167 Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 E + IVL C T + + V +D + ++A L Sbjct: 168 LEE---DGAEAIVLGCAGMT---DLARQLQDFYG--VPVVDGVSAAVKQAEAL 212 >gi|319792375|ref|YP_004154015.1| aspartate racemase [Variovorax paradoxus EPS] gi|315594838|gb|ADU35904.1| aspartate racemase [Variovorax paradoxus EPS] Length = 251 Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 11/157 (7%) Query: 72 LDKYQPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L IACNTA L+ FP + L Q A + +++++T Sbjct: 84 LAALGSRAVAIACNTA--HAWHANLQERFPQVELLHMARETAQQLAAQGATEVALMATEG 141 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T R + CH+ L I+ + G ++ E+ E+ Sbjct: 142 TYRVRLYEQALAEAGLGCHVPLADERQTIMRGIFDGVKAGNMPLAEQCFSEVALRLAERH 201 Query: 189 GKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSD 224 G I++ CT PL + ++ + +D ++ Sbjct: 202 GPV--SIIMGCTEVPLGLQGS-AAVAG--LSLVDPAE 233 >gi|297242764|ref|ZP_06926702.1| aspartate racemase [Gardnerella vaginalis AMD] gi|296888975|gb|EFH27709.1| aspartate racemase [Gardnerella vaginalis AMD] Length = 242 Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 20/162 (12%) Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPA 130 V+ CNTA D+ ++ + + GAV + + ++ I L T Sbjct: 76 MGASFIVLTCNTA-HYFYDKFQA-LTDVPIMHMPRGAVAEVSKRYPKSKCNRIGFLGTAG 133 Query: 131 TLRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 + + I + + ++ V + + + Sbjct: 134 SRKAGVYQRAIEEAGYTFVAPDDDLQKRITSLIYDDV---KGTGDLNLRRYESVLSDMLD 190 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226 R D ++L CT L V + P + +D + ++ Sbjct: 191 PAGACRCDALILGCT--EL--SVLNEAFPLPQIPLVD-AQAV 227 >gi|213648841|ref|ZP_03378894.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 226 Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 27/182 (14%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 + +L+T ATL + + A ++ + + Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW----LDNSDSIARRARC 232 + + + I++ CT PLI ++ +D++ S+ R A Sbjct: 171 QALLLPQIDSLIARGAQAIIMGCTEIPLI------VAGHERAIACPMIDSTASLVRAAIR 224 Query: 233 LL 234 L Sbjct: 225 WL 226 >gi|19910926|dbj|BAB87715.1| glutamate racemase [Helicobacter pylori] Length = 76 Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 19/76 (25%), Gaps = 8/76 (10%) Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 CTH+PLI H + + D+I F Sbjct: 1 GCTHFPLIAHQIESYFMEHFALSTPPLLIHSGDAIVEYLHQ--KYALKKNACAFPKVEFH 58 Query: 252 LSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 ASGDVVWLEKQAKEWL 74 >gi|256844019|ref|ZP_05549506.1| aspartate racemase [Lactobacillus crispatus 125-2-CHN] gi|256849417|ref|ZP_05554849.1| aspartate racemase [Lactobacillus crispatus MV-1A-US] gi|262046084|ref|ZP_06019047.1| aspartate racemase [Lactobacillus crispatus MV-3A-US] gi|293380703|ref|ZP_06626752.1| aspartate racemase [Lactobacillus crispatus 214-1] gi|295693698|ref|YP_003602308.1| aspartate racemase [Lactobacillus crispatus ST1] gi|312976905|ref|ZP_07788654.1| aspartate racemase [Lactobacillus crispatus CTV-05] gi|256613924|gb|EEU19126.1| aspartate racemase [Lactobacillus crispatus 125-2-CHN] gi|256713533|gb|EEU28522.1| aspartate racemase [Lactobacillus crispatus MV-1A-US] gi|260573414|gb|EEX29971.1| aspartate racemase [Lactobacillus crispatus MV-3A-US] gi|290922743|gb|EFD99696.1| aspartate racemase [Lactobacillus crispatus 214-1] gi|295031804|emb|CBL51283.1| Aspartate racemase [Lactobacillus crispatus ST1] gi|310896233|gb|EFQ45298.1| aspartate racemase [Lactobacillus crispatus CTV-05] Length = 249 Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 29/142 (20%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127 K P V+ CNTA D+L + + FL ++ A Y Q I +++ Sbjct: 73 AKLGPDFYVMPCNTA-HYFYDDL-AALTDIPFLHM---MRIAVHQFIEKYPQEKKIGLIA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---------EEYACGIKIKEDEIKK 178 T ++ + IH+ + + + V E+ K+ ++K Sbjct: 128 TEGSIYDHLYVDEIHAVHREAE---LGGPEIQPMVNKLIYSDIKEKGMVDGKLYHQILQK 184 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 + +VI+L CT Sbjct: 185 MHDDY-------GCNVILLGCT 199 >gi|227894011|ref|ZP_04011816.1| aspartate racemase [Lactobacillus ultunensis DSM 16047] gi|227864212|gb|EEJ71633.1| aspartate racemase [Lactobacillus ultunensis DSM 16047] Length = 249 Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 9/132 (6%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPA 130 K P V+ CNTA D+L + + FL + + Y + I +++T Sbjct: 73 AKLNPDFFVMPCNTA-HYFYDDL-AALTDIPFLHMMRIAVHRFIEEYPKETKIGLIATEG 130 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--E 188 ++ + IH + V + ++ + ++ ++K + Sbjct: 131 SIYDHLYEDEIHRVHRDVE---FGGPEIQPMVTKLIYRDIKEKGVVDGKLYHQILQKMHD 187 Query: 189 GKRTDVIVLACT 200 +VI+L CT Sbjct: 188 DYGCNVILLGCT 199 >gi|118477654|ref|YP_894805.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam] gi|229184450|ref|ZP_04311656.1| Aspartate racemase [Bacillus cereus BGSC 6E1] gi|300118042|ref|ZP_07055790.1| aspartate racemase family protein [Bacillus cereus SJ1] gi|118416879|gb|ABK85298.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam] gi|228599029|gb|EEK56643.1| Aspartate racemase [Bacillus cereus BGSC 6E1] gi|298724353|gb|EFI65047.1| aspartate racemase family protein [Bacillus cereus SJ1] Length = 232 Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + + V E I + E K + I++ Sbjct: 129 MEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 189 AQGI---ILGCT 197 >gi|229161200|ref|ZP_04289187.1| hypothetical protein bcere0009_19890 [Bacillus cereus R309803] gi|228622296|gb|EEK79135.1| hypothetical protein bcere0009_19890 [Bacillus cereus R309803] Length = 230 Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 49/140 (35%), Gaps = 8/140 (5%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L +I NT ++ D+++ ++ + A + + Sbjct: 63 VLGNAAYSLQIGGADFIIICTNTMHKVV-DKIKKNI-NIPVVHIADATAKEIKRKGIQTV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180 +L T T+ + + + I + + + S V E I + E K++ Sbjct: 121 GLLGTRYTMEQDFYKSRIEENDIKVIVPSEKNREKVSEVIYTELCLGKIVSQSRECYKKV 180 Query: 181 EGCFIEKEGKRTDVIVLACT 200 +EK + +L CT Sbjct: 181 IEELVEKGAQGI---ILGCT 197 >gi|239993298|ref|ZP_04713822.1| aspartate racemase [Alteromonas macleodii ATCC 27126] Length = 234 Score = 44.5 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 19/149 (12%), Positives = 47/149 (31%), Gaps = 10/149 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + L + L+ +I NT + D + ++ + A Sbjct: 61 DKTADILIREA-----KHLETAGAKAILICTNTMHKVAADIEQK--ITIPLIHIADATGC 113 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKI 171 + + +L T T+ +T+ ++ + + + + + + E C I Sbjct: 114 VLQQDRVKKVGLLGTRFTMEQTFYTSRLKEIFGIEVVTPNAQQRDTVHNIIYEQLCKGVI 173 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + + E + + I+L CT Sbjct: 174 CVES-RNAYIDIINELAAEGAEGIILGCT 201 >gi|220922696|ref|YP_002497998.1| aspartate racemase [Methylobacterium nodulans ORS 2060] gi|219947303|gb|ACL57695.1| aspartate racemase [Methylobacterium nodulans ORS 2060] Length = 236 Score = 44.5 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 40/141 (28%), Gaps = 13/141 (9%) Query: 64 LMFLFSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 M L+ I CNTA L + S+ L V A+ Q Sbjct: 60 AMRATVRWLETAGATCIAIPCNTAHHWHAALQAET------SVRILHIVDAVAD-TLAGQ 112 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 G I +L+T T++ + C + R ++ E Sbjct: 113 GGCIGVLATSGTVKAGIYQKRLALRGFSCRTPDAAGQAEVMRAIRLVKAGQLAEATT--I 170 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 + +V+ACT Sbjct: 171 LRAQAEAMVAAGCRQVVMACT 191 >gi|207859637|ref|YP_002246288.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206711440|emb|CAR35824.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 244 Score = 44.5 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117 Query: 117 YTQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + +L+T ATL Y + ++ ++ + G K Sbjct: 118 -----HVGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRGDKTVAQA 172 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 173 L---LLPQIDSLIARGAQAIIMGCT 194 >gi|134101592|ref|YP_001107253.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338] gi|291009953|ref|ZP_06567926.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338] gi|133914215|emb|CAM04328.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338] Length = 251 Score = 44.5 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 5/133 (3%) Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILS 127 + +L + + CNTA + + AA + +L+ Sbjct: 87 ARVLAAGGADVIAVPCNTAHAF-LPAVVERVGVPLVHMIEQTSRHLAALRPPVRKVGLLA 145 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+R + + + + + S A V IK +D+ + + Sbjct: 146 TTGTVRARLYETWLAT--AGIALLVPDSTSQAEEVMAAIRSIKAGKDD-RGLLARAARRL 202 Query: 188 EGKRTDVIVLACT 200 + I+ CT Sbjct: 203 VDRDARAIIAGCT 215 >gi|227879195|ref|ZP_03997067.1| aspartate racemase [Lactobacillus crispatus JV-V01] gi|227861198|gb|EEJ68845.1| aspartate racemase [Lactobacillus crispatus JV-V01] Length = 252 Score = 44.5 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 29/142 (20%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127 K P V+ CNTA D+L + + FL ++ A Y Q I +++ Sbjct: 76 AKLGPDFYVMPCNTA-HYFYDDL-AALTDIPFLHM---MRIAVHQFIEKYPQEKKIGLIA 130 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---------EEYACGIKIKEDEIKK 178 T ++ + IH+ + + + V E+ K+ ++K Sbjct: 131 TEGSIYDHLYVDEIHAVHREAE---LGGPEIQPMVNKLIYSDIKEKGMVDGKLYHQILQK 187 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 + +VI+L CT Sbjct: 188 MHDDY-------GCNVILLGCT 202 >gi|302543198|ref|ZP_07295540.1| aspartate racemase [Streptomyces hygroscopicus ATCC 53653] gi|302460816|gb|EFL23909.1| aspartate racemase [Streptomyces himastatinicus ATCC 53653] Length = 241 Score = 44.5 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 20/156 (12%) Query: 81 VIA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLRRTY 136 VIA CNTA + + + + + + + + +L+T T+R Sbjct: 84 VIAIPCNTAHAFVPRI--ADHVGLPIIHMIGEVARHLTTVRPAVRTAGLLATTGTVRAGL 141 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKEIEGCFIEKEGKRTDV 194 + Y + L V +K + + + + Sbjct: 142 YQEWLDRY--GIRLVLPDEDDQHREVMAAIRAVKAGTGGAAVTASLARAARRLTDRGAEA 199 Query: 195 IVLACTHYPLIVHVFRQLSPW---PVDWLDNSDSIA 227 I+ CT P V +D + +A Sbjct: 200 IIAGCT-------EIPLGLPADAVDVPLIDPAAILA 228 >gi|209963768|ref|YP_002296683.1| aspartate racemase, putative [Rhodospirillum centenum SW] gi|209957234|gb|ACI97870.1| aspartate racemase, putative [Rhodospirillum centenum SW] Length = 232 Score = 44.2 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 6/135 (4%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 L +I NT + + + A +L+ Sbjct: 67 AGRHLRAGGAEALLICTNTM--HLMAAAVEEAAGLPLIHIADTTAAACRKAGVRRPLLLA 124 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFI 185 T T+ + + +H + + + R+ EE C +I+ED + Sbjct: 125 TRYTMEHPFYAERLHRHGLEPLVPGPEDRTTIHRIIYEE-LCRGEIREDS-RAAYRAVIE 182 Query: 186 EKEGKRTDVIVLACT 200 + D ++L CT Sbjct: 183 RMRAEGADGVILGCT 197 >gi|264677968|ref|YP_003277875.1| aspartate racemase [Comamonas testosteroni CNB-2] gi|262208481|gb|ACY32579.1| aspartate racemase [Comamonas testosteroni CNB-2] Length = 231 Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 8/158 (5%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 E L ++ L L + NT ++ L + + A+ A Sbjct: 54 EREFEQLADYVLDAIHS-LAAGGADLVGLTGNTPNIVLDRILP--LSPVPIVSAIDATCN 110 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR---VEEYACGIK 170 AA + + +L T T+ T+ + + S +A +E Sbjct: 111 AAQERGARKVGLLGTVFTMTNTFFKTPFE--DRGIQVIVPSEHQIAQIQAKIEAELEHGL 168 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208 +KE ++ + ++ + D + LACT PLI+ Sbjct: 169 VKESTRQEFVAIIQDLQQREGIDHVALACTELPLILGE 206 >gi|319957070|ref|YP_004168333.1| aspartate racemase [Nitratifractor salsuginis DSM 16511] gi|319419474|gb|ADV46584.1| aspartate racemase [Nitratifractor salsuginis DSM 16511] Length = 233 Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 3/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 L+ + ++ L +IA NT + S+ L A +A + I Sbjct: 63 LLAADARRIEAAGADLLLIATNTMHKVAPRI--EEALSIPLLHIADATAKAIRDRGTRTI 120 Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T+ + + L + + + R+ + I +E + E Sbjct: 121 GLLGTRFTMEEEFYAGRLRQKWGLEVLTPQKRDREIVHRIIYEELVLGIVREESRAEFLR 180 Query: 183 CFIEKEGKRTDVIVLACT 200 + + + I+ CT Sbjct: 181 IINKLADRGAEGIIEGCT 198 >gi|212704398|ref|ZP_03312526.1| hypothetical protein DESPIG_02453 [Desulfovibrio piger ATCC 29098] gi|212672119|gb|EEB32602.1| hypothetical protein DESPIG_02453 [Desulfovibrio piger ATCC 29098] Length = 242 Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 44/141 (31%), Gaps = 6/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 R++ + L++ VI NT + + + + + Sbjct: 61 ARILADAAQALERGGADFLVICTNTMHKVAPQIAAAV--GIPLMHIADVTARQLHMAGVQ 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKE 179 + +L T T+ + + + + Q + +RV EE G+ ++ Sbjct: 119 RVGLLGTRYTMEEDFYTGRLEANGLQVLVPEAEDRAEINRVIFEELCRGVIKDSS--RET 176 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 177 FLRAIRDLAARGAQGVILGCT 197 >gi|21242547|ref|NP_642129.1| resistance protein [Xanthomonas axonopodis pv. citri str. 306] gi|21108002|gb|AAM36665.1| putative resistance protein [Xanthomonas axonopodis pv. citri str. 306] Length = 234 Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 2/123 (1%) Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ NT + D + + P + L A A I +L T T+ + + Sbjct: 81 DFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGLSRIGLLGTGFTMEQPFY 138 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + + + RV + + E ++ + E I+L Sbjct: 139 RQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIQPESREYVCQVMNELGQHGAQAIIL 198 Query: 198 ACT 200 CT Sbjct: 199 GCT 201 >gi|315230222|ref|YP_004070658.1| aspartate racemase [Thermococcus barophilus MP] gi|315183250|gb|ADT83435.1| aspartate racemase [Thermococcus barophilus MP] Length = 226 Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 72/184 (39%), Gaps = 26/184 (14%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +K+++ + L++ + I+ NT ++ +++ ++ + + A+ + A Sbjct: 58 RKKILINAAKALERAGAEVIGISANT-SHIVFPDVQRAV-NVEMVSIIDAVAEEAKRRGL 115 Query: 121 GLISILSTPATLRRTYTSNLIHSYV------SQCHIHLVSSMILASRVEEYACGIKIKED 174 + +L T T+ ++ + S+ I ++ +I + E + Sbjct: 116 RKLLLLGTKTTMTMSFYKEALKEKGFDVIVPSENEIEEINRIIFEELMFENLNSKLWLIE 175 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV--DWLDNSDSIARRARC 232 I++ +E + + ++L CT PL + P V + LD ++ R Sbjct: 176 LIERYVER-------REIEGVILGCTELPL------AIKPEDVSAEVLDTAEI---HVRA 219 Query: 233 LLPR 236 L+ + Sbjct: 220 LIEK 223 >gi|229085488|ref|ZP_04217726.1| Aspartate racemase [Bacillus cereus Rock3-44] gi|228697793|gb|EEL50540.1| Aspartate racemase [Bacillus cereus Rock3-44] Length = 226 Score = 44.2 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 44/143 (30%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 ++ +L+ + ++ ++ NT E S+ L + Sbjct: 56 EEVQNQLVQVAKK-VEHSGADCILMCSNT--VHQFAEEVEKAISIPLLHIGDVSAEEIIE 112 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + +Y + I + V + I + K Sbjct: 113 KDVKRIGLLGTKQTMEQDFYKTKLTNYGIETIIPEENERNFIHHVILHELSKGIISHQSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 + + + I+L CT Sbjct: 173 EHFLQIIQKLIKNGAEGILLGCT 195 >gi|227327218|ref|ZP_03831242.1| putative aspartate racemase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 238 Score = 44.2 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 42/137 (30%), Gaps = 13/137 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-----GLISIL 126 L++ V+ CNTA D L L A A I ++ Sbjct: 72 LNRLSVSHIVVPCNTA-HHWFDALTEA-SDAPLLHIADATLHALTQVDKAKASPRKIGLI 129 Query: 127 STPATLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +T TL + + + + + + G + ++ Sbjct: 130 ATHGTLNAGWYQQRFAAQLGAETVVPNEQEMTTLFVPGCYAVKRGELQHGGRLLDQLAAQ 189 Query: 184 FIEKEGKRTDVIVLACT 200 +E+ +R +VLACT Sbjct: 190 LVERGAER---LVLACT 203 >gi|261368280|ref|ZP_05981163.1| aspartate racemase [Subdoligranulum variabile DSM 15176] gi|282569801|gb|EFB75336.1| aspartate racemase [Subdoligranulum variabile DSM 15176] Length = 230 Score = 44.2 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 42/144 (29%), Gaps = 18/144 (12%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 +M L Y + I CNTA D L P + L + A + + Sbjct: 61 VMEQDGFSLVNYGATVLAIPCNTA-HYFYDRLAEALP-VPVLNMPRLTVEDAKASGCTKL 118 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK----- 178 IL+T TL S E + D+IK+ Sbjct: 119 GILATDGTLAAETYQLACQRAGIG---WAQPSP------EHQKGITSVIYDDIKQGRRAN 169 Query: 179 --EIEGCFIEKEGKRTDVIVLACT 200 + + + + D VL CT Sbjct: 170 MVKFAAAVADLKSQGCDRAVLGCT 193 >gi|418591|sp|P32968|YPNL_PECCC RecName: Full=Uncharacterized protein in pnlA 3'region Length = 150 Score = 44.2 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 52/127 (40%), Gaps = 6/127 (4%) Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVE 163 + + QA + + + +L+T AT++ R Y NLI + + + Sbjct: 14 ISIIDVTCQAIKHANTTRVGLLATTATVKARIYQDNLITDNIDCYTPDDADQHQVMESIY 73 Query: 164 EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 Y G + ++ ++ + I+L CT PLI+ +++ P ++D + Sbjct: 74 AYKSGDIAGAYSLLSPVKDRLLQ---AGVEKIILGCTELPLILE--QEVRTSPQHYVDAT 128 Query: 224 DSIARRA 230 + + ++ Sbjct: 129 EELIKKT 135 >gi|152975643|ref|YP_001375160.1| aspartate racemase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024395|gb|ABS22165.1| aspartate racemase [Bacillus cytotoxicus NVH 391-98] Length = 226 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 56/173 (32%), Gaps = 10/173 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++ ++ NT + S+ L + Sbjct: 56 EEVKHELIDVAKK-VESSGADCILMCSNT--VHQFADEVEKAVSIPLLHIGDVSAEKIVK 112 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 Q I +L T T+ + + + +Y + I L + I + K Sbjct: 113 QQIKRIGLLGTKQTMEKDFYKARLANYGIETMIPHKDERNLIHHIILNELSKGILSPQSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS---DSIA 227 + + G + I+L CT PL++ ++ P PV D + A Sbjct: 173 EILLQIATTLIGNGAEGILLGCTEIPLLLS--QKDLPIPV--FDTAYLHAETA 221 >gi|59713807|ref|YP_206582.1| racemase [Vibrio fischeri ES114] gi|59482055|gb|AAW87694.1| predicted racemase [Vibrio fischeri ES114] Length = 234 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 49/150 (32%), Gaps = 8/150 (5%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G W++ AL + + ++ +I NT + + + S+ L A Sbjct: 55 GEWDETALI---LVEAAKSVEAGGADFLIICTNTMHKVAPEI--ESNISIPILHIADATA 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA-SRVEEYACGIK 170 + +L T T+ + + L + + + + + + + C Sbjct: 110 NKLVINGIKKVGLLGTRFTMEQDFYKSRLAEKFGIEVVVPEENDRTTVHNIIYDELCRGV 169 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 I D +K + + + ++L T Sbjct: 170 INSDSREKYL-SIVKSLHEQGAEAVILGST 198 >gi|89095413|ref|ZP_01168326.1| aspartate racemase [Oceanospirillum sp. MED92] gi|89080320|gb|EAR59579.1| aspartate racemase [Oceanospirillum sp. MED92] Length = 258 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 52/137 (37%), Gaps = 7/137 (5%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + ++L ++ I CNTA + +L++ P + A ++ Q ++ Sbjct: 87 LQGLEELLSAGVEAIA-IPCNTA-HFWQPDLQAKSP-VPVFHIAHACSESLQQLQISKVT 143 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGC 183 +++T TL+ + ++ Q + + ++ +K + K + Sbjct: 144 LMATDGTLKAGFYPEILSRQGIQLE---LPPADIQQKIMRGIYSVKSGNIALGGKLLNNA 200 Query: 184 FIEKEGKRTDVIVLACT 200 F + + ++L CT Sbjct: 201 FQSLLNQGFERVILGCT 217 >gi|322615680|gb|EFY12600.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618740|gb|EFY15629.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322621846|gb|EFY18696.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627571|gb|EFY24362.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630877|gb|EFY27641.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637904|gb|EFY34605.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642267|gb|EFY38874.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643862|gb|EFY40410.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651060|gb|EFY47445.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656685|gb|EFY52973.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659891|gb|EFY56134.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661900|gb|EFY58116.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666353|gb|EFY62531.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672772|gb|EFY68883.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676202|gb|EFY72273.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680686|gb|EFY76724.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684420|gb|EFY80424.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194243|gb|EFZ79440.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197389|gb|EFZ82529.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201494|gb|EFZ86558.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206008|gb|EFZ90970.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213019|gb|EFZ97821.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215392|gb|EGA00136.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219375|gb|EGA03860.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226196|gb|EGA10413.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228849|gb|EGA12978.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236540|gb|EGA20616.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239960|gb|EGA24007.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241994|gb|EGA26023.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247859|gb|EGA31796.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251502|gb|EGA35373.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258132|gb|EGA41809.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263725|gb|EGA47246.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265681|gb|EGA49177.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270126|gb|EGA53574.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 244 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 + +L+T ATL + + A V + +K + + Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQA-LVMQAIYTLKRGDKTV 169 Query: 177 KKE-IEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 170 AQALLLPQIDSLIARGAQAIIMGCT 194 >gi|288353362|ref|YP_003422659.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4] gi|285026763|gb|ADC33856.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4] Length = 237 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 59/206 (28%), Gaps = 33/206 (16%) Query: 16 ILIFDSGIGG------LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69 I + +GG L +L K+ P D P W + R L Sbjct: 7 IGV----LGGMGPLATLDLLHKIIAATPAEK-----DQDHVPVVCWNVPQIADRQKALAG 57 Query: 70 DI-------------LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 L++ VI CNTA L + A I Q + Sbjct: 58 KGDSPLPQLLEGIEKLNRLDVSHIVIPCNTA-HHWYHALVEVSHAPILHIADETITQILS 116 Query: 117 YTQS-GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE-D 174 + I++T TL + + + + + + +K + Sbjct: 117 MEAVPKKVGIIATQGTLSAGWYQKKL--IAANIEVIFPTEGEMNRLFVAGCYAVKQNKLA 174 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200 + +E + + ++LACT Sbjct: 175 TAAQLLEELSASLVNRGAEKLLLACT 200 >gi|158428132|pdb|2DX7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Ot3 Aspartate Racemase Complex With Citric Acid gi|158428133|pdb|2DX7|B Chain B, Crystal Structure Of Pyrococcus Horikoshii Ot3 Aspartate Racemase Complex With Citric Acid Length = 228 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 16/130 (12%), Positives = 40/130 (30%), Gaps = 5/130 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ ++ NTA + +++R + + + + +L+T T Sbjct: 70 LEECGADFIIMPANTAHAFV-EDIRKAIK-IPIISMIEETAKKVKELGFKKAGLLATTGT 127 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASR-VEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + Y + R + E +K ++ + E + Sbjct: 128 IVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKAGNLKLG--RELLLKTAKILEER 185 Query: 191 RTDVIVLACT 200 + I+ CT Sbjct: 186 GAECIIAGCT 195 >gi|308174385|ref|YP_003921090.1| Aspartate racemase [Bacillus amyloliquefaciens DSM 7] gi|307607249|emb|CBI43620.1| Aspartate racemase [Bacillus amyloliquefaciens DSM 7] Length = 232 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 8/140 (5%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 + + L+K VI NT + ++ ++ L A + I Sbjct: 63 ALGEVARSLEKAGADFIVICTNTM-HKVLGYIQEMI-TIPILHIADATAEQIIRQDIRSI 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180 +L T T+ + + + I S+ + L + + E IK I K+I Sbjct: 121 GLLGTKYTMEQDFYKSRIASHDINVIVPDDDERELINNIIYQELCLGEIKQSSKNIYKKI 180 Query: 181 EGCFIEKEGKRTDVIVLACT 200 +++ + +L CT Sbjct: 181 INNLVDRGAEGI---ILGCT 197 >gi|301597799|ref|ZP_07242807.1| glutamate racemase [Acinetobacter baumannii AB059] Length = 75 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 205 IVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDDHALFLSGKP 256 + +++ + ++ S+++ A+ R L ++ +H ++ S P Sbjct: 1 VSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLNSESPNEGNHIIWTSSDP 53 >gi|224159171|ref|XP_002338051.1| predicted protein [Populus trichocarpa] gi|222870507|gb|EEF07638.1| predicted protein [Populus trichocarpa] Length = 239 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 15/155 (9%) Query: 82 IACNTAFTLIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSG---LISILSTPATLRRTYT 137 +ACNTA +L++ FP + L +QAA + Q+G +L+T T Sbjct: 81 LACNTA--HAWHGQLQALFPQLHVLHI---ARQAALHMQAGGAQQAIVLATQGTYDSGLY 135 Query: 138 SNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV-I 195 + + L + + + D + + DV + Sbjct: 136 DAALAECGITALQPDAQGRARLMQGIYDGVKQGDM--DLAARCFGEVLAPLLQRHGDVPV 193 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 ++ CT PL + + +D + +A+ Sbjct: 194 IMGCTEIPLALP--QSPLARGAKLVDPAWILAQAL 226 >gi|34495568|ref|NP_899783.1| aspartate/glutamate racemace protein [Chromobacterium violaceum ATCC 12472] gi|34101423|gb|AAQ57792.1| probable aspartate/glutamate racemace protein [Chromobacterium violaceum ATCC 12472] Length = 250 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 17/144 (11%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L L+VI NT L+ D++R+ P + + + + A A ++IL T T Sbjct: 91 LAGAGAELAVIPANTV-HLVVDDIRARSP-IPLISILDVVADACAARGLKRVAILGTRWT 148 Query: 132 LRRTYTS-----NLIHSYVSQCH---IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 + R I + + + I V + + +E Sbjct: 149 MARRLYQAPLAARGIEEMIPDEEQQVVIQRA--IFEELVPTG-RASAATLAALLEVVEA- 204 Query: 184 FIEKEGKRTDVIVLACTHYPLIVH 207 + + D + LACT PL++ Sbjct: 205 ---MKAQGCDGVALACTELPLVLD 225 >gi|209550235|ref|YP_002282152.1| Asp/Glu/hydantoin racemase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535991|gb|ACI55926.1| Asp/Glu/hydantoin racemase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 247 Score = 44.2 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 62/173 (35%), Gaps = 23/173 (13%) Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123 L S++ ++ +VIAC + RS F + LG A+ A Q + Sbjct: 57 LLSELKERQTAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAVATAGFLAQRFTV 113 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 T R NL+ Y + +S I +E+ A G +++ EIE Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGERARVRASDIPVLELEDPASGAI---GKLRAEIERA 167 Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 E + IVL C T + + + V +D + ++A L Sbjct: 168 LAE---DGAEAIVLGCAGMT---DLARELQAIYG--VPVIDGVSAAVKQAEAL 212 >gi|325924955|ref|ZP_08186381.1| aspartate racemase [Xanthomonas perforans 91-118] gi|325544618|gb|EGD15975.1| aspartate racemase [Xanthomonas perforans 91-118] Length = 221 Score = 44.2 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 38/123 (30%), Gaps = 2/123 (1%) Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ NT + D + + P + L A A + +L T T+ + + Sbjct: 68 DFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGISRVGLLGTRFTMEQPFY 125 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + + + RV + + E ++ E I+L Sbjct: 126 RQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIKPESREYFCKVMGELGQHGAQAIIL 185 Query: 198 ACT 200 CT Sbjct: 186 GCT 188 >gi|145300427|ref|YP_001143268.1| aspartate racemase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853199|gb|ABO91520.1| aspartate racemase [Aeromonas salmonicida subsp. salmonicida A449] Length = 239 Score = 44.2 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 38/163 (23%), Gaps = 29/163 (17%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +I NT + + + L A + + +L T T Sbjct: 78 LQAGGADFLLIGTNTMHKVAPEI--EAAIDIPLLHIADATARQLLADGVQRVGLLGTRFT 135 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI---------KKEIEG 182 + + + + L +L + I DE+ + E Sbjct: 136 MEQDFYKGRLQ--------TLFGLEVLVPPAAQRERVHSIIYDELCLGEIRASSRAEYLA 187 Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDN 222 ++L CT L V D Sbjct: 188 IIAGLAEAGAQAVILGCT-------EIALLVGDSKAAVPLYDT 223 >gi|4768858|gb|AAD29652.1|AF124757_12 aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4] Length = 232 Score = 44.2 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 57/155 (36%), Gaps = 8/155 (5%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIA--CNTAFTLIKDELRSTFPSMAFLGAVPAI 111 + + L LM ++++ VIA NT ++ D+L+ + + V A Sbjct: 54 DKDYTKLTTYLMHGVNNLIAAGAD---VIALTGNTP-HIVFDDLQKQ-SDVPLISIVEAT 108 Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 + +L T T+ + LI + +S +A+++ Sbjct: 109 CDEVKRQNITKVGLLGTRFTMEADFIKKPLIANGMSVITPQPKEIDYIANKIYSELEKGI 168 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 ++ + + I ++ + I+L CT PL+ Sbjct: 169 FSQNTLSEFISIISRMRDSDGIEAIILGCTELPLL 203 >gi|302526545|ref|ZP_07278887.1| predicted protein [Streptomyces sp. AA4] gi|302435440|gb|EFL07256.1| predicted protein [Streptomyces sp. AA4] Length = 225 Score = 44.2 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 52/160 (32%), Gaps = 33/160 (20%) Query: 81 VIA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 VIA C+TA D L + + A ++G + +L T T+ Sbjct: 76 VIAIPCHTA-HFFLDRLAADSGVPFVDMVAETAEFLAG--RTGPVGLLGTRGTIAAGLYQ 132 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIE--GCFIEKEGKRTDV- 194 V ++ E + +K+ E+ ++ D Sbjct: 133 R------------RVPAVEWVVPSEAGQREVDAAVAAVKRGELADGAAHFDRALADVDTP 180 Query: 195 I-VLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARR 229 + VLACT PL ++ LD +D++ RR Sbjct: 181 LSVLACTELPL-------VAGKSAGVLDPTDLLADAVIRR 213 >gi|153951898|ref|YP_001397342.1| putative aspartate racemase [Campylobacter jejuni subsp. doylei 269.97] gi|152939344|gb|ABS44085.1| putative aspartate racemase [Campylobacter jejuni subsp. doylei 269.97] Length = 231 Score = 44.2 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 4/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +IA NT + DE++ ++ L + +A Sbjct: 61 AQILSQCAKKLELAGASFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L T T+ + + LI +S I+ + C +IK+D +K + Sbjct: 119 KIGLLGTKYTMAQDFYKKMLIEENISVIIPSDEDIQIVNDIIFNELCKGEIKQDSKEKYL 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + K ++LACT Sbjct: 179 -NIIKKLQEKGAKGVLLACT 197 >gi|257869226|ref|ZP_05648879.1| aspartate racemase [Enterococcus gallinarum EG2] gi|257803390|gb|EEV32212.1| aspartate racemase [Enterococcus gallinarum EG2] Length = 234 Score = 44.2 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 8/138 (5%) Query: 67 LFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 L DI + QP V+ CNTA D+L+ P A K +G ++ Sbjct: 65 LLDDIAKQNLLQPNFIVLTCNTA-HYFFDQLQEATPIPLLHMPREAAKSLQKEGVTGKVA 123 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 L T +++ + ++ + L +V + D + +++ Sbjct: 124 FLGTEGSIKAGIYEAELR--ACGFDVY-LPEPQLQQKVNTLIYDRIKESDTLDQDLYFEI 180 Query: 185 IEKEGKRT--DVIVLACT 200 +E+ + + VL CT Sbjct: 181 LEEVTHKIGCEKSVLGCT 198 >gi|86358508|ref|YP_470400.1| hydantoin racemase protein [Rhizobium etli CFN 42] gi|86282610|gb|ABC91673.1| probable hydantoin racemase protein [Rhizobium etli CFN 42] Length = 247 Score = 44.2 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 61/173 (35%), Gaps = 23/173 (13%) Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123 L S++ + +VIAC + RS F + LG A+ A Q + Sbjct: 57 LLSELRARQVAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAVVTAGFLAQRFTV 113 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 T R NL+ Y + +S I +E+ A G +++ EIE Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGDRAKVRASDIPVLELEDAASGAI---GKLRAEIERA 167 Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 E + IVL C T + + + V +D + ++A L Sbjct: 168 LAE---DGAEAIVLGCAGMT---DLARELQDIYG--VPVVDGVAAAVKQAEAL 212 >gi|219667320|ref|YP_002457755.1| aspartate racemase [Desulfitobacterium hafniense DCB-2] gi|219537580|gb|ACL19319.1| aspartate racemase [Desulfitobacterium hafniense DCB-2] Length = 231 Score = 44.2 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 49/139 (35%), Gaps = 2/139 (1%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + L+ V+ NT + DE+++ + L Q A + Sbjct: 61 AEILANAARSLEAAGAEFIVLCTNTMHKVA-DEIQAGL-QIPLLHIADMTAQQALTSNIR 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 I +L T T+ + + S+ + + + + + V + I E + + + Sbjct: 119 TIGLLGTRYTMEQEFYSSRLEAQGIKVLTPEEGDKAVVNEVIYQELCLGIINQESRNQFK 178 Query: 182 GCFIEKEGKRTDVIVLACT 200 + + IVL CT Sbjct: 179 RIIADLVEQGAQGIVLGCT 197 >gi|261821090|ref|YP_003259196.1| aspartate racemase [Pectobacterium wasabiae WPP163] gi|261605103|gb|ACX87589.1| aspartate racemase [Pectobacterium wasabiae WPP163] Length = 238 Score = 44.2 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 15/138 (10%) Query: 72 LDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQS-GLISI 125 L++ V+ CNTA L + S P + + AI + I + Sbjct: 72 LNRLSVSHIVVPCNTAHHWFDALAEA---SHAPLVHIADATLHAITPLVEEKEVPQKIGL 128 Query: 126 LSTPATLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++T TL + + +S + + + + +++ Sbjct: 129 IATHGTLNAGWYQQRFTTQLSAETVVPNEQEMTTLFVPGCYAVKRCELQHGGRLLEQLAA 188 Query: 183 CFIEKEGKRTDVIVLACT 200 +E+ +R +VLACT Sbjct: 189 QLVERGAER---LVLACT 203 >gi|213029645|ref|ZP_03344092.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 199 Score = 44.2 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 17 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 72 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 + +L+T ATL + + A ++ + + Sbjct: 73 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 125 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 126 QALLLPQIDSLIARGAQAIIMGCT 149 >gi|168234643|ref|ZP_02659701.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735758|ref|YP_002117430.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204926710|ref|ZP_03217912.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|194711260|gb|ACF90481.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291651|gb|EDY31001.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204323375|gb|EDZ08570.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 244 Score = 43.8 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 + +L+T ATL + + A ++ + + Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 171 QALLLPQIDSLIARGAQAIIMGCT 194 >gi|168821040|ref|ZP_02833040.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205342298|gb|EDZ29062.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084589|emb|CBY94380.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 244 Score = 43.8 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 + +L+T ATL + + A ++ + + Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 171 QALLLPQIDSLIARGAQAIIMGCT 194 >gi|16763318|ref|NP_458935.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144796|ref|NP_808138.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213428375|ref|ZP_03361125.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581046|ref|ZP_03362872.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609708|ref|ZP_03369534.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|289825451|ref|ZP_06544682.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25512393|pir||AD1067 probable aspartate racemase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505627|emb|CAD03355.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi] gi|29140435|gb|AAO71998.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 244 Score = 43.8 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 + +L+T ATL + + A ++ + + Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 171 QALLLPQIDSLIARGAQAIIMGCT 194 >gi|213052215|ref|ZP_03345093.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 246 Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 64 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 119 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 + +L+T ATL + + A ++ + + Sbjct: 120 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 172 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 173 QALLLPQIDSLIARGAQAIIMGCT 196 >gi|16767754|ref|NP_463369.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56416294|ref|YP_153369.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167551230|ref|ZP_02344985.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991305|ref|ZP_02572404.1| aspartate racemase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232862|ref|ZP_02657920.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168243994|ref|ZP_02668926.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194451334|ref|YP_002048531.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469149|ref|ZP_03075133.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197365218|ref|YP_002144855.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|238910673|ref|ZP_04654510.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16423076|gb|AAL23328.1| putative aspartate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56130551|gb|AAV80057.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194409638|gb|ACF69857.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455513|gb|EDX44352.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197096695|emb|CAR62317.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205323833|gb|EDZ11672.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330368|gb|EDZ17132.1| aspartate racemase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333029|gb|EDZ19793.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337028|gb|EDZ23792.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261249596|emb|CBG27465.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996863|gb|ACY91748.1| putative aspartate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160993|emb|CBW20529.1| probable aspartate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915607|dbj|BAJ39581.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222517|gb|EFX47589.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132850|gb|ADX20280.1| putative aspartate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332991319|gb|AEF10302.1| putative aspartate racemase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 244 Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 + +L+T ATL + + A ++ + + Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 171 QALLLPQIDSLIARGAQAIIMGCT 194 >gi|167615897|ref|ZP_02384532.1| aspartate racemase [Burkholderia thailandensis Bt4] Length = 230 Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 42/166 (25%), Gaps = 16/166 (9%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R M + + V+ NT + S+ F+ V +A Sbjct: 62 RRMRQAARQAEAGGADFVVLCTNTMHKVAPAI--EAALSVPFVHIVDPTARALRRAGVRR 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR--VEEYACGIKIKEDEIKKEI 180 +L T T+ + + S + + A V + D + Sbjct: 120 AGLLGTRFTMEEAFYRERMASL-HGIDVIVPDERDQAVIHDVIYDELCHGVVRDASRDAY 178 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 E ++L CT L D++ + Sbjct: 179 RRIIESLEAAGAQGVILGCT-------EIALLIGPE----DSALPV 213 >gi|300856110|ref|YP_003781094.1| aspartate racemase [Clostridium ljungdahlii DSM 13528] gi|300436225|gb|ADK15992.1| aspartate racemase [Clostridium ljungdahlii DSM 13528] Length = 230 Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 3/138 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT L D + + L A + + +L T T Sbjct: 71 LKKGGADFIIICTNTMHKLAPDI--ESKVGIKVLHIAEAAGKKIIEKNIKTVGLLGTKFT 128 Query: 132 LRRTYTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + ++ + I + + ++ I +D +++ + + Sbjct: 129 MEEDFYKKVLKDKFNINVSIPDENDREVIHQIIYNELCKGIIKDPSREKYKKIINKLSLN 188 Query: 191 RTDVIVLACTHYPLIVHV 208 + IVL CT PL++ Sbjct: 189 GAEGIVLGCTEIPLLIKQ 206 >gi|260890046|ref|ZP_05901309.1| hypothetical protein GCWU000323_01208 [Leptotrichia hofstadii F0254] gi|260860069|gb|EEX74569.1| aspartate racemase [Leptotrichia hofstadii F0254] Length = 231 Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 60/184 (32%), Gaps = 19/184 (10%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 ++ + L+K VI NT ++ ++++ S+ L + Sbjct: 60 EKSGE-----ILGEAAYNLEKAGADFIVICTNTMHKVV-NQIKEKI-SIPILHIAEMTAE 112 Query: 114 AAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 I++L T T+ + + LI ++ I+ + + C I Sbjct: 113 KILEKGLKNIALLGTKYTMEQDFYKSKLIEKGINVIIPDKNDIEIINKVIYDELCLGTIN 172 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARR 229 + KK +E + K + I+L CT L V D + A++ Sbjct: 173 SNSKKKFLE-IVDKLRSKGAEGIILGCT-------EIGLLIKNEDTDVPLFDTAIIHAKQ 224 Query: 230 ARCL 233 A Sbjct: 225 AAIY 228 >gi|253687797|ref|YP_003016987.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754375|gb|ACT12451.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 238 Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 39/133 (29%), Gaps = 21/133 (15%) Query: 80 SVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-----GLISILSTPA 130 V+ CNTA L ++ + A A I +++T Sbjct: 80 IVVPCNTAHHWFDALAEESYA------PLIHIADATLHAITLPADAKKAPQKIGLIATHG 133 Query: 131 TLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 TL + + + + + + G + ++ + + Sbjct: 134 TLNVGWYQQRFAAQLGAETVVPDEQEMTTLFVPGCYAVKRGELQHGGRLLDQLAARLVAR 193 Query: 188 EGKRTDVIVLACT 200 +R +VLACT Sbjct: 194 GAER---LVLACT 203 >gi|50083589|ref|YP_045099.1| putative aspartate racemase [Acinetobacter sp. ADP1] gi|49529565|emb|CAG67277.1| putative aspartate racemase [Acinetobacter sp. ADP1] Length = 236 Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 + +++ L IL+ +I CNTA D+L+ + + + A + Sbjct: 58 DKPFEKMREYL-----KILENANVGCIIIPCNTA-HFWFDQLQQQTHTK-MISIIEATVR 110 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA 159 + + I IL+T AT+ + ++ + + + L Sbjct: 111 FIQKSNAQEICILATSATINTELYQKELANHQIKFTLPELEIQQLV 156 >gi|315039136|ref|YP_004032704.1| aspartate racemase [Lactobacillus amylovorus GRL 1112] gi|312277269|gb|ADQ59909.1| aspartate racemase [Lactobacillus amylovorus GRL 1112] gi|327184252|gb|AEA32699.1| aspartate racemase [Lactobacillus amylovorus GRL 1118] Length = 249 Score = 43.8 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 15/135 (11%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127 DK V+ CNTA D+L + FL ++ A Y I +++ Sbjct: 73 DKLGTDFMVMPCNTA-HYFYDDL-AALTDKPFLHM---MRIAVHNFTDNYPDEKKIGLIA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186 T ++ ++ I + + + V E ++ + ++ Sbjct: 128 TEGSIYDHLYADEIKRVGRKVE---LGGPEIQPMVNELIYSDIKEKGTVDHDLYHKILKT 184 Query: 187 KEGK-RTDVIVLACT 200 K +VI+L CT Sbjct: 185 MHDKYGCNVILLGCT 199 >gi|89902487|ref|YP_524958.1| aspartate racemase [Rhodoferax ferrireducens T118] gi|89347224|gb|ABD71427.1| Aspartate racemase [Rhodoferax ferrireducens T118] Length = 243 Score = 43.8 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 19/149 (12%), Positives = 38/149 (25%), Gaps = 16/149 (10%) Query: 72 LDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 L++ V+ NT I + ++ + L A + +L T Sbjct: 76 LERAGADALVLCTNTMHKVAAAISNAVQ-----IPLLHIADPTAVAIKQAGYTTVGLLGT 130 Query: 129 PATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T+ + + L + + L RV + + + Sbjct: 131 RFTMEQDFYRSRLEQDHSLTVLTPKPADRDLVHRVIYDELCLGQVLPASRDAYLRVIADL 190 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWP 216 + I+L CT L Sbjct: 191 GARGAQAIILGCT-------EIAMLIGPH 212 >gi|315932541|gb|EFV11475.1| aspartate racemase family protein [Campylobacter jejuni subsp. jejuni 327] Length = 231 Score = 43.8 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 4/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +IA NT + DE++ ++ L + +A Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L T T+ + + LI +S I+ + C +IK+D +K + Sbjct: 119 KIGLLGTKYTMTQDFYKKILIEENISVITPSDEDIKIVNDIIVNELCKGEIKQDSKEKYL 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + K ++LACT Sbjct: 179 -NIINKLQEKGAKGVLLACT 197 >gi|116253108|ref|YP_768946.1| hydantoin racemase [Rhizobium leguminosarum bv. viciae 3841] gi|115257756|emb|CAK08854.1| putative hydantoin racemase [Rhizobium leguminosarum bv. viciae 3841] Length = 247 Score = 43.8 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 64/173 (36%), Gaps = 23/173 (13%) Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123 L +++ ++ +VIAC + R TF ++ LG A+ A Q + Sbjct: 57 LLAELKERQGLGYDAAVIAC--FDDTGLEAAR-TFANVPILGLCESAVVTAGFLAQRFTV 113 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 T R NL+ Y + +S I +E+ G +++ EIE Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGDRAKVRASDIPVLELEDAGSGAI---GKLRAEIERA 167 Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 +E + IVL C T + +++ V +D + ++A L Sbjct: 168 LLE---DGAEAIVLGCAGMT---DLARELQEIYG--VPVVDGVAAAVKQAEAL 212 >gi|90424471|ref|YP_532841.1| aspartate racemase [Rhodopseudomonas palustris BisB18] gi|90106485|gb|ABD88522.1| aspartate racemase [Rhodopseudomonas palustris BisB18] Length = 246 Score = 43.8 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 48/140 (34%), Gaps = 5/140 (3%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +++ + +L++ +I NT L DE++ S+ L +A Sbjct: 69 QILADIARVLEQGGASCLLICTNTMHKLA-DEVQQAV-SIPLLHIADVTAEAVKAEGLSR 126 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEI 180 +L+T T+ + + + + + + + C + + + Sbjct: 127 PLLLATRYTMEQDFYVERLREGFGLDPVIPDADGRTVIHDIIFDELCQGIVSDAS-RNLY 185 Query: 181 EGCFIEKEGKRTDVIVLACT 200 E + K D ++L CT Sbjct: 186 LDVIAEGKAKGADCVILGCT 205 >gi|213409287|ref|XP_002175414.1| hydantoin racemase [Schizosaccharomyces japonicus yFS275] gi|212003461|gb|EEB09121.1| hydantoin racemase [Schizosaccharomyces japonicus yFS275] Length = 236 Score = 43.8 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 17/164 (10%) Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY- 136 V+AC + L+ + +R +F + LG V A Q+A + I IL+T T R Sbjct: 72 DAIVVACYSPTPLV-EMIRESF-DVPCLGIVQASIQSA-MSVGRRIGILTT--TKRSELM 126 Query: 137 -TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L H +S+ I + S L VE+ A + + + + + Sbjct: 127 LYELLKHLGISRTIIAGIQSSGLT--VEQLATLPEEERISLLVSKARKLVLDLNADVVCL 184 Query: 196 ---VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236 VLA + + ++ + +D S + L+ + Sbjct: 185 GGAVLAS-----LRDLIQEAIGPNIVIVDGVRSAVEQLATLVRQ 223 >gi|237653714|ref|YP_002890028.1| aspartate racemase [Thauera sp. MZ1T] gi|237624961|gb|ACR01651.1| aspartate racemase [Thauera sp. MZ1T] Length = 239 Score = 43.8 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 38/129 (29%), Gaps = 9/129 (6%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ NT + ++ L A + + +L T T+ + Sbjct: 75 GADFIVLCTNTMHKVAPAI--EAATNIPLLHIADPTAAAIRHASLSRVGLLGTRFTMEQA 132 Query: 136 YTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACG-IKIKEDEIKKEIEGCFIEKEGKR 191 + L + + RV EE G ++ + + +E+ + Sbjct: 133 FYRGRLEERHGIAVLVPAADDRERVHRVIYEELCLGRVEDASRAAYRAVMRRLVERGAQG 192 Query: 192 TDVIVLACT 200 +L CT Sbjct: 193 I---ILGCT 198 >gi|228910604|ref|ZP_04074416.1| amino-acid racemase [Bacillus thuringiensis IBL 200] gi|228849019|gb|EEM93861.1| amino-acid racemase [Bacillus thuringiensis IBL 200] Length = 224 Score = 43.8 bits (103), Expect = 0.027, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 8/143 (5%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 A+KK ++ L+ + CNTA L +EL+ + S+ L V Q Sbjct: 57 EAMKKAIIEGAQK-LESTGVEFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQTIPE 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 +++L+T AT++ + I I + + + + IK E E Sbjct: 114 NI-KRVTLLATEATIQAGIYQDGIAKRN----IEYIHNEQWQESINQIITCIKGGEIEEA 168 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + + D ++ACT Sbjct: 169 RKLWSVLVVQLKAEVDTAIIACT 191 >gi|19910924|dbj|BAB87713.1| glutamate racemase [Helicobacter pylori] Length = 76 Score = 43.8 bits (103), Expect = 0.027, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 8/76 (10%) Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 CTH+PLI H + + D+I + F Sbjct: 1 GCTHFPLIAHQIEGYFMEHFALSTPPLLVHSGDAIVEYLQQ--KYALKKNACAFPKVEFH 58 Query: 252 LSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 ASGDVVWLEKQAKEWL 74 >gi|328886300|emb|CCA59539.1| aspartate racemase [Streptomyces venezuelae ATCC 10712] Length = 235 Score = 43.8 bits (103), Expect = 0.027, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 27/154 (17%) Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 ++K L L L I CNTA L D++ S P+ + +A + Sbjct: 72 IRKHLFTLVEW-----GADLLAIPCNTAHAL-LDDIASELPAPLVDIVDATLDEAVRLSP 125 Query: 120 SGLISILSTPATLRRTYTSN---------LIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 G + +T T+ + Q +H + ++ A R EE A + Sbjct: 126 EGG-WLTATTGTVASGVYQKRAAARGYPLHVPRDAEQERVHAAAGLVKAGRTEEAAGAFQ 184 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204 D + + + CT PL Sbjct: 185 ---DVVTSLLRRRPLPVLAA--------CTELPL 207 >gi|218463154|ref|ZP_03503245.1| probable hydantoin racemase protein [Rhizobium etli Kim 5] Length = 226 Score = 43.8 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 63/173 (36%), Gaps = 23/173 (13%) Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123 L S++ ++ +VIAC + RS F + LG A+ A Q + Sbjct: 36 LLSELKERQSAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAVVTAGFLAQRFTV 92 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 T R NL+ Y + +S I +E A G +++ EIE Sbjct: 93 ---VTTLERSRVLIDNLVRRYGMGERAKVRASDIPVLELENAASGAI---GKLRAEIERA 146 Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 E + IVL C T + H +++ V +D + ++A L Sbjct: 147 LAE---DGAEAIVLGCAGMT---DLAHQLQEIYG--VPVVDGVSAAVKQAEAL 191 >gi|268678695|ref|YP_003303126.1| aspartate racemase [Sulfurospirillum deleyianum DSM 6946] gi|268616726|gb|ACZ11091.1| aspartate racemase [Sulfurospirillum deleyianum DSM 6946] Length = 233 Score = 43.8 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 64/177 (36%), Gaps = 26/177 (14%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 +++ + L++ + ++ NT L + F FL A A Sbjct: 58 EETAQIIKEAAISLERAGVDIILLCTNTM--HKILPLVTPFIQTPFLHIAEATAHALNEN 115 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIK--ED 174 + +L T T++ T+ +++++ + + I +++ +R+ +E G D Sbjct: 116 GAKKSILLGTKFTMQETFYTDILNQHSIEIIIPDKNAIETINRIIFDELCIGKIETASRD 175 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT-----------HYPL-------IVHVFRQLS 213 + I ++++ D ++L CT H PL + + + Sbjct: 176 SFIEIIHA--LKRQNDEIDSVILGCTEIGLLLNQESSHLPLFDTTLLHVKEALKYVL 230 >gi|238854410|ref|ZP_04644752.1| aspartate racemase [Lactobacillus jensenii 269-3] gi|260665101|ref|ZP_05865951.1| aspartate racemase [Lactobacillus jensenii SJ-7A-US] gi|282931814|ref|ZP_06337299.1| aspartate racemase [Lactobacillus jensenii 208-1] gi|313473005|ref|ZP_07813492.1| aspartate racemase [Lactobacillus jensenii 1153] gi|238833032|gb|EEQ25327.1| aspartate racemase [Lactobacillus jensenii 269-3] gi|239528788|gb|EEQ67789.1| aspartate racemase [Lactobacillus jensenii 1153] gi|260561155|gb|EEX27129.1| aspartate racemase [Lactobacillus jensenii SJ-7A-US] gi|281304121|gb|EFA96238.1| aspartate racemase [Lactobacillus jensenii 208-1] Length = 250 Score = 43.8 bits (103), Expect = 0.029, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 12/151 (7%) Query: 57 DHALKKRLMFLFSDILDKY---QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIK 112 K+ F D ++K +P V+ CNTA +L + + FL + AI Sbjct: 54 KDHTKENFFFALKDDVEKQSLLKPDFFVMPCNTA-HYFYHDL-AALTEVPFLNMMDIAIH 111 Query: 113 QAAAYTQS-GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 + I +++T ++ I + + V + Sbjct: 112 TFLEKFPNEKKIGLIATEGSIYDRLYEKSIEKVGREVE---FGGSEIQPMVTDLIYHNIK 168 Query: 172 KEDEIKKEIEGCFIEK--EGKRTDVIVLACT 200 ++ + KE+ ++K + +VI+L CT Sbjct: 169 EKGVVNKELYHRILQKMHDEYGCNVILLGCT 199 >gi|239503532|ref|ZP_04662842.1| Hydantoin racemase [Acinetobacter baumannii AB900] Length = 244 Score = 43.4 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 77/220 (35%), Gaps = 41/220 (18%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +++ ++LD VIAC R S +G A + A+Y Sbjct: 59 EEIRQ------GELLD---VDAYVIAC--FGDPALYAARE-ISSAPVIGIAEAAMRTASY 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEI 176 +G + + T+ ++ +L H Y + V + I VEE I Sbjct: 107 VSTGFSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRTI 161 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRA 230 + E + E + D IVL C + + V +D + ++A Sbjct: 162 RDECKKALAEDKS---DAIVLGC------AGMSDLCIKLQNELG--VIVIDGVAAAVKQA 210 Query: 231 RCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 +L ++N ++V D + P ++ GFG++ Sbjct: 211 E-MLVQLNLKTSKVGD-----WASPPVKNYTGILSGFGMR 244 >gi|16127508|ref|NP_422072.1| aspartate racemase [Caulobacter crescentus CB15] gi|221236323|ref|YP_002518760.1| aspartate racemase [Caulobacter crescentus NA1000] gi|13424970|gb|AAK25240.1| aspartate racemase [Caulobacter crescentus CB15] gi|220965496|gb|ACL96852.1| aspartate racemase [Caulobacter crescentus NA1000] Length = 253 Score = 43.4 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 7/141 (4%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + + L+ V+ NT + + + L +A Sbjct: 81 RRLADAARALEAGGADFLVLCTNTM--HREADEIEAAVHIPLLHIADPTGEAIKAAGLST 138 Query: 123 ISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKE 179 + +L T T+ + L+ + + R+ EE G + ++ Sbjct: 139 VGLLGTAFTMEHDFYRGRLLKKHGLSVLTPDADDRAIVHRIIYEELVAGRVLDAS--REA 196 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 197 YRAVIARLVDRGAEAIILGCT 217 >gi|331701597|ref|YP_004398556.1| aspartate racemase [Lactobacillus buchneri NRRL B-30929] gi|329128940|gb|AEB73493.1| aspartate racemase [Lactobacillus buchneri NRRL B-30929] Length = 236 Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 49/125 (39%), Gaps = 13/125 (10%) Query: 82 IACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 I CNTA DEL+ + L V AIK + + +++T TL Sbjct: 82 IPCNTA-HYFYDELQ-KLTDVPILHMPKETVAAIKD--YAPNAKRVGLIATEGTLHDQIY 137 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RTDVI 195 + I + + + + +A + ++E+ + + + + + + D++ Sbjct: 138 DHEIINAGYEL---VKPTDKIADQTMTLIYDDIKAKNEVDEGLYHLILSQMVESLKCDIV 194 Query: 196 VLACT 200 +L CT Sbjct: 195 ILGCT 199 >gi|92112334|ref|YP_572262.1| aspartate racemase [Chromohalobacter salexigens DSM 3043] gi|91795424|gb|ABE57563.1| Aspartate racemase [Chromohalobacter salexigens DSM 3043] Length = 239 Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 7/140 (5%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 + + ++ +IA NT + + L A ++ + Sbjct: 63 TLAAAARQIEHAGADFLLIATNTMHKVAPQV--EAAIDIPLLHIADATAESLVADGITRV 120 Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEI 180 +L T T+ + + L Y + + +V EE G E ++ Sbjct: 121 GLLGTRFTMEQDFYKQRLSERYGIDVVVPDDTQRERVHQVIFEELCLGRI--ESASREAF 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + ++L CT Sbjct: 179 LAVIDALHARGAQAVILGCT 198 >gi|159185592|ref|NP_357525.2| aspartate racemase [Agrobacterium tumefaciens str. C58] gi|159140726|gb|AAK90310.2| aspartate racemase [Agrobacterium tumefaciens str. C58] Length = 230 Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 41/131 (31%), Gaps = 2/131 (1%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L + ++A NT L +D + + L A +++T Sbjct: 69 KALQRGGADFILLATNTMHKLARDMMEGV--DIPLLHIADATADRILSAGLSRPGLIATA 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T+ +++ + + + + R+ +I DE + E Sbjct: 127 FTMEQSFYKDRLVAASLHPVLPDADDRRTVHRIIYDELCREIIRDESRSTYEDVARRLVD 186 Query: 190 KRTDVIVLACT 200 D ++L CT Sbjct: 187 AGADCMILGCT 197 >gi|315125973|ref|YP_004067976.1| aspartate racemase [Pseudoalteromonas sp. SM9913] gi|315014487|gb|ADT67825.1| aspartate racemase [Pseudoalteromonas sp. SM9913] Length = 231 Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 21/139 (15%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 ++ +I NT + DE+ S ++ L A + + + +L T T Sbjct: 71 VEAGGAEFLLICTNTMHKVA-DEIASNI-TIPILHIADATAEQLKHDNITRVGLLGTQFT 128 Query: 132 LRRTYTSN----------LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + + + LI + +H V + C I +D I Sbjct: 129 MEQNFYKERLTNKHNIEVLIPEPNERKRVHEV--------IYSQLCQGIIDDDSRADYI- 179 Query: 182 GCFIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 180 RIIERLFAQGAQAIILGCT 198 >gi|229011500|ref|ZP_04168688.1| Aspartate racemase [Bacillus mycoides DSM 2048] gi|228749791|gb|EEL99628.1| Aspartate racemase [Bacillus mycoides DSM 2048] Length = 232 Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 44/137 (32%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L K +I NT ++ ++++ ++ L + I Sbjct: 63 VLGNAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADTTAKEIKRKGIQTI 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + I + + + V + + ++ + Sbjct: 121 GLLGTKYTMEQDFYKLRIEENHIKVMVPSKKDRDKINEVIYTELCLGKITPQSREYYKRV 180 Query: 184 FIEKEGKRTDVIVLACT 200 E + I+L CT Sbjct: 181 IEELVQEGAQGIILGCT 197 >gi|307729191|ref|YP_003906415.1| aspartate racemase [Burkholderia sp. CCGE1003] gi|307583726|gb|ADN57124.1| aspartate racemase [Burkholderia sp. CCGE1003] Length = 232 Score = 43.4 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L++ L ++A NT + + + + FL A + +L Sbjct: 67 AARQLERGGAQLVMLATNTM-HRVYESI-ERAIHVPFLHIADPTGSALRAAGVERVGLLG 124 Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ +T YT L Y + R+ + E ++ +G Sbjct: 125 TRYTMEQTFYTGRLRERYGLDTLAPDEADRADVHRIIYDELCHGDVKRESREVYQGVIES 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LRERGAQAVILGCT 198 >gi|167644868|ref|YP_001682531.1| aspartate racemase [Caulobacter sp. K31] gi|167347298|gb|ABZ70033.1| aspartate racemase [Caulobacter sp. K31] Length = 233 Score = 43.4 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 39/139 (28%), Gaps = 13/139 (9%) Query: 68 FSDILDKYQPVLSVIACNTA--FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125 + L+ V+ NT D + L A + + Sbjct: 69 AAKALETGGADFLVLCTNTMHRCAWAIDAAVQ----IPLLHIADPTAAAIQAAGITRVGL 124 Query: 126 LSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIE 181 L T T+ + + L + + + + E A + E+ + + Sbjct: 125 LGTAFTMEQDFYRGRLEDKFGLEVLVPDEDDRAAVHGIIYRELVAGQVLGTSREVYRAVI 184 Query: 182 GCFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 185 RRLVARGAQG---VILGCT 200 >gi|34557174|ref|NP_906989.1| hypothetical protein WS0774 [Wolinella succinogenes DSM 1740] gi|34482890|emb|CAE09889.1| conserved hypothetical protein [Wolinella succinogenes] Length = 231 Score = 43.4 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 17/150 (11%), Positives = 52/150 (34%), Gaps = 3/150 (2%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + + + + L++ IA NT + S+ + ++ + ++ Sbjct: 58 TILEEKLLQAALELERLGCQGLAIASNTM--HLLAPALEGALSIPLVHIADSVGEESSLK 115 Query: 119 QSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 +++L T T+ + + + L + + L I ++ + Sbjct: 116 GYKKLALLGTLFTMEKDFYASRLQERFDLEVITPAKEERNLVHECIYRELVNNIFTEDSR 175 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 ++ + + + ++L CT PL++ Sbjct: 176 RDFIQIIHGLKERGAEAVILGCTEIPLLLE 205 >gi|161504935|ref|YP_001572047.1| hypothetical protein SARI_03065 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866282|gb|ABX22905.1| hypothetical protein SARI_03065 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 244 Score = 43.4 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 46/138 (33%), Gaps = 5/138 (3%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + + +L+ VI CNTA D+L++ + + + A + + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKA-RMISILDATLEDIPPSA-RH 118 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L+T ATL ++ + L + + + + + Sbjct: 119 VGLLATNATLATGLYQKKAQAHGLTLIQPEDAGQALVMQA--IYTLKRGDKPAAQALLLP 176 Query: 183 CFIEKEGKRTDVIVLACT 200 + I++ CT Sbjct: 177 QIDSLVARGVQAIIMGCT 194 >gi|172061098|ref|YP_001808750.1| aspartate racemase [Burkholderia ambifaria MC40-6] gi|171993615|gb|ACB64534.1| aspartate racemase [Burkholderia ambifaria MC40-6] Length = 230 Score = 43.4 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT + D + + ++ FL A +++L Sbjct: 67 AARQLEAAGADLVVLTTNTM-HRVYDAIEAAV-ALPFLHIADPTGAALRAAGVERVALLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + + L + + ++ R+ + + + E Sbjct: 125 TRYTMELPFYAERLRDKFGLDVLVPDEAARGDVHRIIYDELCHGVIDAASRATYVAIIDE 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAKRGAQAVILGCT 198 >gi|126699872|ref|YP_001088769.1| putative amino acid recemase [Clostridium difficile 630] gi|255101398|ref|ZP_05330375.1| putative amino acid recemase [Clostridium difficile QCD-63q42] gi|115251309|emb|CAJ69140.1| Asp/Glu racemase [Clostridium difficile] Length = 228 Score = 43.4 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + VI NT + D+++ + + L + +++L T T Sbjct: 71 LQEAGADFIVICTNTM-HKVSDKIQESI-HIPLLHIADVTATVLREKEIKKVALLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + N+I + + I I+ + + I + KK + + Sbjct: 129 MEQDFYKNVIINNGIEVLIPNEEDRIIVNDTIFNELCLGIISESSKKAFLSIIDKLGKQG 188 Query: 192 TDVIVLACT 200 + ++L CT Sbjct: 189 AEAVILGCT 197 >gi|223039517|ref|ZP_03609805.1| aspartate racemase [Campylobacter rectus RM3267] gi|222879313|gb|EEF14406.1| aspartate racemase [Campylobacter rectus RM3267] Length = 227 Score = 43.4 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 25/70 (35%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L IACNTA K + ++ + + + + + I++++T T Sbjct: 70 LKNAGCEAICIACNTAHYFAKRLTQECGVNILHIAKIATASIKSNFPHAKKIAVIATTGT 129 Query: 132 LRRTYTSNLI 141 N + Sbjct: 130 TAAKIYENEL 139 >gi|86358367|ref|YP_470259.1| aspartate racemase protein [Rhizobium etli CFN 42] gi|86282469|gb|ABC91532.1| probable aspartate racemase protein [Rhizobium etli CFN 42] Length = 239 Score = 43.4 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 43/133 (32%), Gaps = 2/133 (1%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 ++ L +I NT LI +++ + S+ + + ++ +L+ Sbjct: 67 VAERLQAGGAGCVLICTNTM-HLIAEQVAARI-SVPLIHIIDETAKSLHAAGRKRPLLLA 124 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + + + + + + D ++++ Sbjct: 125 TRYTMEHGFYAERMKGLGLDIIVPDAADRTTVHDIIFNELCAGRVRDSSREKLIDIIDRA 184 Query: 188 EGKRTDVIVLACT 200 + D I+L CT Sbjct: 185 AERGADSIILGCT 197 >gi|120553990|ref|YP_958341.1| aspartate racemase [Marinobacter aquaeolei VT8] gi|120323839|gb|ABM18154.1| aspartate racemase [Marinobacter aquaeolei VT8] Length = 229 Score = 43.4 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 35/137 (25%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ L V+ NT + + L A A + Sbjct: 63 ILGAVGKALAAAGADFIVLCTNTMHKVADSI--EKASGLPMLHIADATADALHRDGIDCV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + + + + + V I K+ Sbjct: 121 GLLGTKFTMEQAFYKERLENRGIRVLVPGDAQREFVHTVIYDELCRGIIRQPSKQGYLQV 180 Query: 184 FIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 181 LDSLAARGAQGIILGCT 197 >gi|310800198|gb|EFQ35091.1| carbon-nitrogen hydrolase [Glomerella graminicola M1.001] Length = 603 Score = 43.4 bits (102), Expect = 0.039, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 46/149 (30%), Gaps = 15/149 (10%) Query: 78 VLSVIACNTAFTLIK-DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 ++AC LR P +G + A AA T G +++ + R Sbjct: 427 DAVLVAC--YSDHALIRMLREELPRQPVIGIMEASLFAAR-TLGGRFGLVA-VSERSRVL 482 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 + IH Y V S L ++ I + +E K DV++ Sbjct: 483 HEDSIHHYGFSTSCAGVISCKLGVLDLHEKSQGEVMG--IMANVGKRLVE--EKGADVLL 538 Query: 197 LAC---THYPLIVHVFRQLSPWPVDWLDN 222 L C T P + V +D Sbjct: 539 LGCAGMT--P-LKGAVEAAVGEDVQVVDG 564 >gi|333008508|gb|EGK27978.1| aspartate racemase [Shigella flexneri K-272] gi|333020629|gb|EGK39889.1| aspartate racemase [Shigella flexneri K-227] Length = 239 Score = 43.0 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 38/134 (28%), Gaps = 14/134 (10%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VI CNTA EL+ + L V I +L+T AT Sbjct: 71 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNAT 128 Query: 132 LRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 L I S + + G ++ E Sbjct: 129 LYMGLYQKGIESLGFTCVSPDAD----GQKKVMESIYSLKAGNIAHAQKLMNEQAEILFS 184 Query: 187 KEGKRTDVIVLACT 200 + +++VL CT Sbjct: 185 R---GAEILVLGCT 195 >gi|300946728|ref|ZP_07160978.1| aspartate racemase [Escherichia coli MS 116-1] gi|300976693|ref|ZP_07173549.1| aspartate racemase [Escherichia coli MS 200-1] gi|15808704|gb|AAL08433.1|AF326777_8 unknown [Shigella flexneri 2a] gi|300308501|gb|EFJ63021.1| aspartate racemase [Escherichia coli MS 200-1] gi|300453611|gb|EFK17231.1| aspartate racemase [Escherichia coli MS 116-1] Length = 229 Score = 43.0 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 38/134 (28%), Gaps = 14/134 (10%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VI CNTA EL+ + L V I +L+T AT Sbjct: 61 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNAT 118 Query: 132 LRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 L I S + + G ++ E Sbjct: 119 LYMGLYQKGIESLGFTCVSPDAD----GQKKVMESIYSLKAGNIAHAQKLMNEQAEILFS 174 Query: 187 KEGKRTDVIVLACT 200 + +++VL CT Sbjct: 175 R---GAEILVLGCT 185 >gi|333006274|gb|EGK25783.1| aspartate racemase [Shigella flexneri K-218] Length = 239 Score = 43.0 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 38/134 (28%), Gaps = 14/134 (10%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VI CNTA EL+ + L V I +L+T AT Sbjct: 71 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNAT 128 Query: 132 LRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 L I S + + G ++ E Sbjct: 129 LYMGLYQKGIESLGFTCVSPDAD----GQKKVMESIYSLKAGNIAHAQKLMNEQAEILFS 184 Query: 187 KEGKRTDVIVLACT 200 + +++VL CT Sbjct: 185 R---GAEILVLGCT 195 >gi|83717323|ref|YP_439354.1| aspartate racemase [Burkholderia thailandensis E264] gi|83651148|gb|ABC35212.1| aspartate racemase [Burkholderia thailandensis E264] Length = 230 Score = 43.0 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 41/165 (24%), Gaps = 14/165 (8%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R M + + V+ NT + S+ F+ V +A Sbjct: 62 RRMRQAARQAEAGGADFVVLCTNTMHKVAPAI--EAALSVPFVHIVDPTARALRRAGVRR 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T T+ + + S + + V + D + Sbjct: 120 AGLLGTRFTMEEAFYRERMASLHGIDVIVPDERDRAVIHDVIYDELCHGVVRDASRDAYR 179 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 E ++L CT L D++ + Sbjct: 180 RIIESLEAAGAQGVILGCT-------EIALLIGPE----DSALPV 213 >gi|257142474|ref|ZP_05590736.1| aspartate racemase [Burkholderia thailandensis E264] Length = 221 Score = 43.0 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 41/165 (24%), Gaps = 14/165 (8%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R M + + V+ NT + S+ F+ V +A Sbjct: 53 RRMRQAARQAEAGGADFVVLCTNTMHKVAPAI--EAALSVPFVHIVDPTARALRRAGVRR 110 Query: 123 ISILSTPATLRRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +L T T+ + + S + + V + D + Sbjct: 111 AGLLGTRFTMEEAFYRERMASLHGIDVIVPDERDRAVIHDVIYDELCHGVVRDASRDAYR 170 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 E ++L CT L D++ + Sbjct: 171 RIIESLEAAGAQGVILGCT-------EIALLIGPE----DSALPV 204 >gi|241205465|ref|YP_002976561.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859355|gb|ACS57022.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 239 Score = 43.0 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 16/154 (10%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +RL + + + + C NT LI D++ S+ + + ++ Sbjct: 62 RRLADVALRLQIAGAGCILI--CTNTM-HLIADKVAEKI-SVPLIHIIDETAKSLHAAGR 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179 +L+T T+ + S+ + S + + + C K+ + + + Sbjct: 118 KRPLLLATRYTMEHGFYSDRMKSLGLDIMVPDAGDRTTVHDIIFDELCAGKVLDSS-RDK 176 Query: 180 IEGCFIEKEGKRTDVIVLACT---------HYPL 204 + D I+L CT H PL Sbjct: 177 LMAVISRAIDNGADSIILGCTEICLILDPNHLPL 210 >gi|262278788|ref|ZP_06056573.1| hydantoin racemase [Acinetobacter calcoaceticus RUH2202] gi|262259139|gb|EEY77872.1| hydantoin racemase [Acinetobacter calcoaceticus RUH2202] Length = 244 Score = 43.0 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 32/205 (15%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ +IAC R S +G A + A+Y +G + + T+ Sbjct: 65 EQLNVDAYIIAC--FGDPALYAARE-ITSAPVIGIAEAAMRTASYVSTGFSVVTTLQRTV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 ++ +L H Y +Q V + I VEE ++ E + E + Sbjct: 122 NMSW--HLAHRYGAQPFCKNVRACDI---AVEELELPDSDAYRIVRDECKKALAEDKS-- 174 Query: 192 TDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 D IVL C + + V +D + ++A +L +N ++V Sbjct: 175 -DAIVLGC------AGMSDLCLKLQNDLG--VIVIDGVTAAVKQAE-MLVHLNLKTSKVG 224 Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270 D + P ++ GFG++ Sbjct: 225 D-----WASPPAKNYTGILSGFGMR 244 >gi|291085128|ref|ZP_06352145.2| putative aspartate racemase [Citrobacter youngae ATCC 29220] gi|291072057|gb|EFE10166.1| putative aspartate racemase [Citrobacter youngae ATCC 29220] Length = 229 Score = 43.0 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 58/162 (35%), Gaps = 28/162 (17%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VI CNTA +EL+ + + L V I +L+T AT Sbjct: 61 LEDAGAECIVIPCNTA-HFWFNELKESCHT-ELLSIVETTLNEVKNCGKSRIGLLATNAT 118 Query: 132 LRRTYTSNLIHSY---------VSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 L I S SQ + + + A IK + + ++ E Sbjct: 119 LYMGLYQKGIESLGLTCVSPDSSSQEKVMESIYCL--------KAGDIKRAQTLMNEQAE 170 Query: 182 GCFIEKEGKRTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDN 222 F + +VIVL CT P ++ ++ P ++D+ Sbjct: 171 ALF----SRGAEVIVLGCTEVPVILAEAVKK---SPAKYIDS 205 >gi|255307272|ref|ZP_05351443.1| putative amino acid recemase [Clostridium difficile ATCC 43255] Length = 228 Score = 43.0 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + VI NT + D+++ + + L + +++L T T Sbjct: 71 LQEAGADFIVICTNTM-HKVSDKIQESV-HIPLLHIADVTATVLREKEIKKVALLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + N+I + + I I+ + + I + KK + + Sbjct: 129 MEQDFYKNVIINNGIEVLIPNEEDRIIVNDTIFNELCLGIISESSKKAFLSIIDKLGKQG 188 Query: 192 TDVIVLACT 200 + ++L CT Sbjct: 189 AEAVILGCT 197 >gi|294102668|ref|YP_003554526.1| aspartate racemase [Aminobacterium colombiense DSM 12261] gi|293617648|gb|ADE57802.1| aspartate racemase [Aminobacterium colombiense DSM 12261] Length = 237 Score = 43.0 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 2/72 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L ++ + + CNTA D R P ++ AA ++ G +L+T T Sbjct: 78 LARWGADILAVPCNTA-HYFIDSFREELPVPFVHIIEATVELAAERSREGA-WLLATSGT 135 Query: 132 LRRTYTSNLIHS 143 R Sbjct: 136 KRSGMYERYAEK 147 >gi|282599710|ref|ZP_05971586.2| aspartate racemase [Providencia rustigianii DSM 4541] gi|282568330|gb|EFB73865.1| aspartate racemase [Providencia rustigianii DSM 4541] Length = 251 Score = 43.0 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L V+ NT + + L A + + T I +L T T Sbjct: 91 LQAAGADFLVLCTNTMHKVAPQI--EDISKLPLLHIADATGECISNTGIKTIGLLGTAFT 148 Query: 132 LRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + N L + I + + + + ++ K E + + + Sbjct: 149 MEQAFYKNRLSDKFGLNVIIPNDADRKVVHDIIYNELCVGKIKESSKAEYQRIMRQLVKQ 208 Query: 191 RTDVIVLACT 200 + I+L CT Sbjct: 209 GAEGIILGCT 218 >gi|325957607|ref|YP_004293019.1| aspartate racemase [Lactobacillus acidophilus 30SC] gi|325334172|gb|ADZ08080.1| aspartate racemase [Lactobacillus acidophilus 30SC] Length = 249 Score = 43.0 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 15/135 (11%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127 DK V+ CNTA D+L + FL ++ A Y I +++ Sbjct: 73 DKLGTDFMVMPCNTA-HYFYDDL-AALTGKPFLHM---MRIAVHNFTDNYPDEKKIGLIA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186 T ++ ++ I + + + V E ++ + ++ Sbjct: 128 TEGSIYDHLYADEIKRVGRKVE---LGGPEIQPMVNELIYSDIKEKGTVDHDLYHKILKT 184 Query: 187 KEGK-RTDVIVLACT 200 K +VI+L CT Sbjct: 185 MHDKYGCNVILLGCT 199 >gi|319652508|ref|ZP_08006623.1| aspartate racemase [Bacillus sp. 2_A_57_CT2] gi|317395762|gb|EFV76485.1| aspartate racemase [Bacillus sp. 2_A_57_CT2] Length = 240 Score = 43.0 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 10/141 (7%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+K +I NT + +++S ++ L A + Sbjct: 74 VLGNAARSLEKGGADFIIICTNTM-HKVIGDIQSKI-NIPILHIADATAAQIKKKGIKSV 131 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACG--IKIKEDEIKKE 179 +L T T+ + + + Q + + + +++ EE G + D KK Sbjct: 132 GLLGTRYTMEEDFYKSRLEFNGIQVIVPNDNEREIINKIIYEELCLGKIHQKSRDYYKKV 191 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 I+G I+ K +L CT Sbjct: 192 IQG-LIKSGAKGI---ILGCT 208 >gi|260102957|ref|ZP_05753194.1| aspartate racemase [Lactobacillus helveticus DSM 20075] gi|260083242|gb|EEW67362.1| aspartate racemase [Lactobacillus helveticus DSM 20075] Length = 223 Score = 43.0 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 14/144 (9%) Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQSGLISILSTPATLRRTYTSNLI 141 CNTA DEL + + FL + K Y + +++T ++R I Sbjct: 84 CNTA-HYWYDEL-AALSDVPFLNMMEIAVHKFVDDYPDEKNLGLIATEGSIRDGLYVKYI 141 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD--VIVLAC 199 ++ + V + G ++ ++ E+ + + V++L C Sbjct: 142 KKVN---KTPVLGGPEIQLMVNQLIYGDIKEKGKVDPELFHHILTLMHDKYGCKVVLLGC 198 Query: 200 THYPL-IVHVFRQLSPWPVDWLDN 222 T L + + + V +D Sbjct: 199 T--ELSLANE--KALDPDVAVIDP 218 >gi|86149571|ref|ZP_01067801.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597747|ref|ZP_01100980.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218561766|ref|YP_002343545.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839839|gb|EAQ57098.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190051|gb|EAQ94027.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112359472|emb|CAL34256.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925378|gb|ADC27730.1| putative aspartate racemase [Campylobacter jejuni subsp. jejuni IA3902] gi|315927766|gb|EFV07093.1| aspartate racemase family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930862|gb|EFV09852.1| aspartate racemase family protein [Campylobacter jejuni subsp. jejuni 305] Length = 231 Score = 43.0 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 4/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +IA NT + DE++ ++ L + +A Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L T T+ + + LI +S I+ + C +IK+D +K + Sbjct: 119 KIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDIIFNELCKGEIKQDSKEKYL 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + K ++LACT Sbjct: 179 -NIIKKLQEKGAKGVLLACT 197 >gi|126641492|ref|YP_001084476.1| hydantoin racemase [Acinetobacter baumannii ATCC 17978] Length = 210 Score = 43.0 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 71/197 (36%), Gaps = 38/197 (19%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +++ ++LD VIAC R S +G A + A+Y Sbjct: 25 EEIRQ------GELLD---VDAYVIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASY 72 Query: 118 TQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDE 175 +G S+++T T+ ++ +L H Y + V + I VEE Sbjct: 73 VSTG-FSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRT 126 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARR 229 I+ E + E + D IVL C + + V +D + ++ Sbjct: 127 IRDECKKALAEDKS---DAIVLGC------AGMSDLCLKLQNELG--VIVIDGVAAAVKQ 175 Query: 230 ARCLLPRINTHQTRVFD 246 A +L ++N ++V D Sbjct: 176 AE-MLVQLNLKTSKVGD 191 >gi|184157805|ref|YP_001846144.1| Hydantoin racemase [Acinetobacter baumannii ACICU] gi|332876493|ref|ZP_08444260.1| hydantoin racemase [Acinetobacter baumannii 6014059] gi|183209399|gb|ACC56797.1| Hydantoin racemase [Acinetobacter baumannii ACICU] gi|322508120|gb|ADX03574.1| Hydantoin-racemase [Acinetobacter baumannii 1656-2] gi|323517694|gb|ADX92075.1| Hydantoin racemase [Acinetobacter baumannii TCDC-AB0715] gi|332735351|gb|EGJ66411.1| hydantoin racemase [Acinetobacter baumannii 6014059] Length = 244 Score = 43.0 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 41/220 (18%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +++ ++LD VIAC R S +G A + A+Y Sbjct: 59 EEIRQ------GELLD---VDAYVIAC--FGDPALYAARE-ISSAPVIGIAEAAMRTASY 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEI 176 +G + + T+ ++ +L H Y + V + I VEE I Sbjct: 107 VSTGFSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRTI 161 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRA 230 + E + E + D IVL C + + V +D + ++A Sbjct: 162 RDECKKALAEDKS---DAIVLGC------AGMSDLCIKLQNELG--VIVIDGVAAAVKQA 210 Query: 231 RCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 +L ++N ++V D + P ++ GFG+ Sbjct: 211 E-MLVQLNLKTSKVGD-----WASPPVKNYTGILSGFGMS 244 >gi|157691918|ref|YP_001486380.1| aspartate racemase [Bacillus pumilus SAFR-032] gi|157680676|gb|ABV61820.1| aspartate racemase [Bacillus pumilus SAFR-032] Length = 232 Score = 43.0 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 58/176 (32%), Gaps = 24/176 (13%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTP 129 L++ +IACNTA + ++ + + + ++ A + + +L T Sbjct: 71 LERAGADFILIACNTA-HFFLENVQQS-THIPIMNM--PLETAKHLNKHHYTSVGLLCTD 126 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILAS----RVEEYACGIKIKEDEIKKEIEGCFI 185 TL+ + V+ E + +I Sbjct: 127 GTLKTKLYQKACAHHKIDVMTPSEELQKNVMNGIYAVKAGKLSKGESELALASKI----- 181 Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRIN 238 + + I+ CT PL++ + V +D + +A+ A L L ++N Sbjct: 182 -LINQGAEAIIAGCTEIPLVLRSTKA-----VKVIDPTVILAKEAVKLVYELEKLN 231 >gi|19910918|dbj|BAB87710.1| glutamate racemase [Helicobacter pylori] Length = 76 Score = 43.0 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 20/76 (26%), Gaps = 8/76 (10%) Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 CTH+PLI H + + D+I R F Sbjct: 1 GCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDTIVEYLRQ--KYALKKNACAFPKVEFH 58 Query: 252 LSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 ASGDAIWLEKQAKEWL 74 >gi|116334099|ref|YP_795626.1| aspartate racemase [Lactobacillus brevis ATCC 367] gi|116099446|gb|ABJ64595.1| Aspartate racemase [Lactobacillus brevis ATCC 367] Length = 237 Score = 43.0 bits (101), Expect = 0.047, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 5/119 (4%) Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATLRRTYTSNLIH 142 CNTA D+L++ +K+ + ++ I I T T+ + + Sbjct: 84 CNTA-HYFYDDLQAATTIPLLHMPRETVKEIQRHFPEAKRIGITGTQGTITDKVYEDEV- 141 Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDVIVLACT 200 + L ++ I A +E IK ++ + + + D+++L CT Sbjct: 142 -LAAGLTPVLPTAEIEAETMELIYDNIKEQDRVDAPLYHRILRQMHDEQGADLVILGCT 199 >gi|260777724|ref|ZP_05886617.1| aspartate racemase [Vibrio coralliilyticus ATCC BAA-450] gi|260605737|gb|EEX32022.1| aspartate racemase [Vibrio coralliilyticus ATCC BAA-450] Length = 230 Score = 43.0 bits (101), Expect = 0.047, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 6/149 (4%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G W+ A+ + + L+K +IA NT + S+ L A Sbjct: 55 GEWDKTAII---LSEAAQSLEKAGADFLLIATNTMHKVASQV--EEAVSIPLLHIADATG 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 Q A + +L T T+ + + L + + + L V + Sbjct: 110 QQLAEQGINKVGLLGTAFTMEQLFYKQRLTDKFGIEVIVPNGVQRRLVHDVIYNELCLGE 169 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 K++ + + ++L CT Sbjct: 170 INARSKQDFKTIIEDLSADGAQGVILGCT 198 >gi|168262443|ref|ZP_02684416.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205348837|gb|EDZ35468.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 244 Score = 43.0 bits (101), Expect = 0.048, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117 Query: 117 YTQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + +L+T ATL Y + ++ ++ + G K Sbjct: 118 -----YVGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRGDKTAAQA 172 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 + + + I++ CT Sbjct: 173 L---LLPQIDSLIARGAQAIIMGCT 194 >gi|150377827|ref|YP_001314422.1| Asp/Glu racemase [Sinorhizobium medicae WSM419] gi|150032374|gb|ABR64489.1| Asp/Glu racemase [Sinorhizobium medicae WSM419] Length = 241 Score = 43.0 bits (101), Expect = 0.049, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 12/128 (9%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131 + VIAC R +G A Q A T S S+++T P + Sbjct: 65 EAQGVDAYVIAC--FDDPGLHAAREVAKG-PVIGICQAAVQVA-MTISRRFSVITTLPRS 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + +LI Y ++ H V ++ L + E + +EIE + K Sbjct: 121 V--PIIEDLISDYGAERHCRKVRAIDLPVLA--LEEDPQKAERLLLQEIE---LAKAEDG 173 Query: 192 TDVIVLAC 199 + IVL C Sbjct: 174 AEAIVLGC 181 >gi|218463300|ref|ZP_03503391.1| aspartate racemase [Rhizobium etli Kim 5] Length = 261 Score = 43.0 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 48/140 (34%), Gaps = 5/140 (3%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +RL + + + + C NT LI D++ + S+ + + ++ Sbjct: 84 RRLGEVAERLQAAGAGCILI--CTNTM-HLIADKVAAKI-SVPLIHIIDETAKSLHAAGR 139 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +L+T T+ + ++ + S + + + D ++++ Sbjct: 140 KRPLLLATRYTMEHGFYTDRMKSLGLDVMVPDATDRTTVHDIIFNELCAGRVHDSSREKL 199 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + D I+L CT Sbjct: 200 IDIIDRAAERGADSIILGCT 219 >gi|116252958|ref|YP_768796.1| aspartate racemase [Rhizobium leguminosarum bv. viciae 3841] gi|115257606|emb|CAK08703.1| putative aspartate racemase [Rhizobium leguminosarum bv. viciae 3841] Length = 239 Score = 43.0 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 49/153 (32%), Gaps = 14/153 (9%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 +RL + + + + C NT LI D++ S+ + + ++ Sbjct: 62 RRLADVALRLQIAGAGCILI--CTNTM-HLIADKVAEKI-SVPLIHIIDETAKSLHAAGR 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +L+T T+ + S+ + S + S + D ++++ Sbjct: 118 KRPLLLATRYTMEHGFYSDRMKSLGFDIMVPDASDRTTVHDIIFNELCAGKVLDSSRQKL 177 Query: 181 EGCFIEKEGKRTDVIVLACT---------HYPL 204 D I+L CT H PL Sbjct: 178 FDVIARAVDNGADSIILGCTEICLILDPDHLPL 210 >gi|149185927|ref|ZP_01864242.1| Aspartate racemase [Erythrobacter sp. SD-21] gi|148830488|gb|EDL48924.1| Aspartate racemase [Erythrobacter sp. SD-21] Length = 222 Score = 43.0 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 10/144 (6%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 ++ + L+ VIA NT + D + S+ L A+ A A + Sbjct: 51 IASILVESARRLEAAGAQGIVIAANTM-HKVYDRVAEGI-SIPVLHIADAVGVAMAEAKC 108 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 ++L T + ++ VS L V + ++ + ++ Sbjct: 109 ENAALLGTRFVMTESFYR---QRLVSHGVDLLPPDPNDVELV-DGIIYKELMLGRVTRDA 164 Query: 181 EGCFI----EKEGKRTDVIVLACT 200 E K+ + D IVLACT Sbjct: 165 ERALKTVITMKDKEGADAIVLACT 188 >gi|260466809|ref|ZP_05812994.1| aspartate racemase [Mesorhizobium opportunistum WSM2075] gi|259029421|gb|EEW30712.1| aspartate racemase [Mesorhizobium opportunistum WSM2075] Length = 231 Score = 42.6 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 43/118 (36%), Gaps = 4/118 (3%) Query: 85 NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHS 143 NT L D+++++ S+ + A A ++L+T T+ + + L Sbjct: 84 NTMHKLA-DQVQASV-SIPLIHIADATAAAIKRAGMQRPALLATRFTMEQDFYKGRLADK 141 Query: 144 YVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 Y + + + RV + C + + + + + D I++ CT Sbjct: 142 YGLSPVVPDAAGRDMVHRVIYDELCQGIVTDASKTAYVAEAERLRREEAADSIIMGCT 199 >gi|242238745|ref|YP_002986926.1| aspartate racemase [Dickeya dadantii Ech703] gi|242130802|gb|ACS85104.1| aspartate racemase [Dickeya dadantii Ech703] Length = 241 Score = 42.6 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 16/137 (11%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILST 128 L++ IACNTA D+L+++ L A AA I +++T Sbjct: 76 LNRLGASHIAIACNTA-HHWFDDLQAS-SEAPLLHIADAALSQLTTAAPPSERRIGLIAT 133 Query: 129 PATLRRTYTSNLIHSYV-----SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 TL + + + G + +++ Sbjct: 134 HGTLAAGWYQQRLAERGMTPVLPDADELE---TLFVPGCYAVKRGEVAAGGRLFEQLAER 190 Query: 184 FIEKEGKRTDVIVLACT 200 E+ +R ++LACT Sbjct: 191 LAERGAER---LILACT 204 >gi|332715830|ref|YP_004443296.1| Hydantoin racemase [Agrobacterium sp. H13-3] gi|325062515|gb|ADY66205.1| Hydantoin racemase [Agrobacterium sp. H13-3] Length = 257 Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 25/164 (15%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 +VIAC D R+ + +G A A A+ + T R Sbjct: 73 GARAAVIAC--FDDTGLDAARA-LADIPVIGICEAAVSATAFIAQR--FTIVTTMERSRL 127 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +L+H Y ++ ++ I +E+ A + +++EI + R + I Sbjct: 128 PLEHLVHRYGMSARCNVRAADIPVLSLEDPASN---ARERLREEIS---LALRQDRAEAI 181 Query: 196 VLAC------THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 VL C T R V +D + ++A L Sbjct: 182 VLGCAGMADLT------AELRSEFG--VPVIDGVAAAVKQAESL 217 >gi|254502015|ref|ZP_05114166.1| aspartate racemase subfamily [Labrenzia alexandrii DFL-11] gi|222438086|gb|EEE44765.1| aspartate racemase subfamily [Labrenzia alexandrii DFL-11] Length = 230 Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 45/159 (28%), Gaps = 18/159 (11%) Query: 45 ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF 104 D RLM + L++ VI NT + + + Sbjct: 55 GDWARA-----------TRLMIDAAQNLERGGAECLVICTNTMHKMAGEV--QAAVDIPL 101 Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV- 162 + A A S +L+T T+ + + +L + + I R+ Sbjct: 102 IHIADATAPAIKSAGSTAPLLLATAYTMEQDFYKGHLRDQHGIEVRIPEADDRAAVHRII 161 Query: 163 -EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 EE G + + + D ++ CT Sbjct: 162 YEELCQGEVLDRSKTR--YLDVVDRAVAAGADGVIFGCT 198 >gi|152968015|ref|YP_001363799.1| aspartate racemase [Kineococcus radiotolerans SRS30216] gi|151362532|gb|ABS05535.1| aspartate racemase [Kineococcus radiotolerans SRS30216] Length = 233 Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 L+ + L+ L +IA NT + + S+ L A + Sbjct: 63 LLAAEARGLEAAGADLLLIATNTM--HRVFDAVAGAVSVPVLHLADVTAVAVRAAGLSRV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L+T T+ + + + + + R+ + ED ++ + Sbjct: 121 GLLATRYTMEQDFYRARLAEGGVTTIVPGEADREEVQRIVFEELCVGRVEDASRRRLLAV 180 Query: 184 FIEKEGKRTDVIVLACT 200 + IVL CT Sbjct: 181 AAGLVAAGAEGIVLGCT 197 >gi|320180171|gb|EFW55109.1| Glutamate racemase [Shigella boydii ATCC 9905] Length = 61 Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 221 DNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271 D+ +IARR LL + A ++ P+ + ++Q +G ++ Sbjct: 2 DSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFET 53 >gi|170703494|ref|ZP_02894257.1| aspartate racemase [Burkholderia ambifaria IOP40-10] gi|170131600|gb|EDT00165.1| aspartate racemase [Burkholderia ambifaria IOP40-10] Length = 230 Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 39/134 (29%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT ++ FL A +++L Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHGAIEAAVALPFLHIADPTGAALRAAGVERVALLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + + L + + ++ R+ + + + E Sbjct: 125 TRYTMELPFYAERLRDKFDLDVLVPDEAARNDVHRIIYDELCHGVIDAASRAIYVAIIDE 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAKRGAQAVILGCT 198 >gi|170726261|ref|YP_001760287.1| aspartate racemase [Shewanella woodyi ATCC 51908] gi|169811608|gb|ACA86192.1| aspartate racemase [Shewanella woodyi ATCC 51908] Length = 231 Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 44/140 (31%), Gaps = 3/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + L+ +I NT + DE+++ ++ L A + Sbjct: 61 AAILSEAASGLEAANADFFMICTNTMHKVA-DEVQAKV-NIPLLHIADATAELLVKDGIK 118 Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L T T+ ++ L Y + + RV + + + Sbjct: 119 KVGLLGTQFTMAESFYKGRLTEKYGIEVLTPSDDDQSIIHRVIYDELCQGVVNAQSRSAY 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + D ++L CT Sbjct: 179 VEIIEKLRDNGADAVILGCT 198 >gi|78047388|ref|YP_363563.1| putative aspartate racemase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035818|emb|CAJ23509.1| putative aspartate racemase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 234 Score = 42.6 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 2/123 (1%) Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 V+ NT + D + + P + L A A + +L T T+ + + Sbjct: 81 DFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGISRVGLLGTRFTMEQPFY 138 Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + + + + RV + + + ++ E I+L Sbjct: 139 RQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIKPQSREYFCKVMGELGQHGAQAIIL 198 Query: 198 ACT 200 CT Sbjct: 199 GCT 201 >gi|311033066|ref|ZP_07711156.1| aspartate racemase family protein [Bacillus sp. m3-13] Length = 229 Score = 42.6 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 10/133 (7%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VI NT ++ +E++S ++ L A + +L T T Sbjct: 71 LEMGGADFIVICTNTMHKVV-NEIQSKI-TIPLLHIADATAAQIKEKGINSVGLLGTRYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACG--IKIKEDEIKKEIEGCFIEK 187 + + + + + + + + ++V EE G + D KK I G IE Sbjct: 129 MEQDFYKSRLEMNGIKVIVPSEQEREIINKVIYEELCLGKIQEKSRDYYKKVIHG-LIES 187 Query: 188 EGKRTDVIVLACT 200 K +L CT Sbjct: 188 GAKGI---ILGCT 197 >gi|295701003|ref|YP_003608896.1| aspartate racemase [Burkholderia sp. CCGE1002] gi|295440216|gb|ADG19385.1| aspartate racemase [Burkholderia sp. CCGE1002] Length = 233 Score = 42.6 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 24/172 (13%) Query: 70 DILDKYQPVLSVIACNTAFTLIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 D+L++ L I CN+A + RS P + A AA +++L+T Sbjct: 68 DLLNRNGVGLIAIPCNSAHHWYEPMRARSKAPVLHIAQTCVAAVPRAA----RRVALLAT 123 Query: 129 PATLRRTYTSNLIHSY-------VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 L + + + + + + K D +E Sbjct: 124 GGALVSGFYQQALADLDIEPVLPDESMQLRVAACIREV---------KAGKLDAAGAHLE 174 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 I + ++ACT PL R ++ P+ +D+S +AR Sbjct: 175 DVLIALASQGVGTALMACTEIPLAA---RHIASPPLILVDSSLELARATVKY 223 >gi|109896337|ref|YP_659592.1| aspartate racemase [Pseudoalteromonas atlantica T6c] gi|109698618|gb|ABG38538.1| aspartate racemase [Pseudoalteromonas atlantica T6c] Length = 232 Score = 42.6 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ +I NT + + +T S+ L A Q + + +L T T Sbjct: 71 LEHAGVDFIIICTNTMHKVEPEIAAAT--SIPILHIADATGQVLKKDRLKRVGLLGTAFT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + L + + V + D+ ++ + K Sbjct: 129 MEQDFYESRLATKFGIDVIVPDDDDRAFIHNVIYDELCKGVINDKSRQGYLRIIDKLYAK 188 Query: 191 RTDVIVLACT 200 + +VL CT Sbjct: 189 GCEGVVLGCT 198 >gi|302910077|ref|XP_003050212.1| hypothetical protein NECHADRAFT_85108 [Nectria haematococca mpVI 77-13-4] gi|256731149|gb|EEU44499.1| hypothetical protein NECHADRAFT_85108 [Nectria haematococca mpVI 77-13-4] Length = 220 Score = 42.6 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 30/106 (28%), Gaps = 3/106 (2%) Query: 97 STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSS 155 + + V + +L T T+ + + L + + Sbjct: 82 EKASQLPLIHIVDPTADRILKAGFKSVGLLGTRFTMEKDFYKSRLEEKFGLSVIVPNEEG 141 Query: 156 MILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 S + C I D +++ E + + ++L CT Sbjct: 142 KETVHSIIYSELCSGIINNDS-REKYHEIIRELKKAGAECLILGCT 186 >gi|239626800|ref|ZP_04669831.1| aspartate racemase [Clostridiales bacterium 1_7_47_FAA] gi|239516946|gb|EEQ56812.1| aspartate racemase [Clostridiales bacterium 1_7_47FAA] Length = 231 Score = 42.6 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 55/158 (34%), Gaps = 13/158 (8%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 L L+ ++ V ++ A NT ++ D+L+ P + + + A A Sbjct: 58 EELTAYLLAAVRNLAAAGAEVGALSA-NTP-HIVFDQLKKQTP-IPLVSIIEAACGEANR 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + ++ T T++ ++ S + + E+ ++ + ++ Sbjct: 115 RGLTRLGLMGTIFTMKGSFFQRPFEE--SGIQVISPREDEMEYINEKIYTELEFAD--VR 170 Query: 178 KEIEGCFI-----EKEGKRTDVIVLACTHYPL-IVHVF 209 +E + + E ++L CT PL + Sbjct: 171 EETQEGLVRIIRRMVEEDGIQAVILGCTELPLALNDRI 208 >gi|193077103|gb|ABO11874.2| hydantoin racemase [Acinetobacter baumannii ATCC 17978] Length = 244 Score = 42.6 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 71/197 (36%), Gaps = 38/197 (19%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +++ ++LD VIAC R S +G A + A+Y Sbjct: 59 EEIRQ------GELLD---VDAYVIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASY 106 Query: 118 TQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDE 175 +G S+++T T+ ++ +L H Y + V + I VEE Sbjct: 107 VSTG-FSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRT 160 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARR 229 I+ E + E + D IVL C + + V +D + ++ Sbjct: 161 IRDECKKALAEDKS---DAIVLGC------AGMSDLCLKLQNELG--VIVIDGVAAAVKQ 209 Query: 230 ARCLLPRINTHQTRVFD 246 A +L ++N ++V D Sbjct: 210 AE-MLVQLNLKTSKVGD 225 >gi|16126276|ref|NP_420840.1| aspartate racemase [Caulobacter crescentus CB15] gi|221235050|ref|YP_002517486.1| aspartate racemase [Caulobacter crescentus NA1000] gi|13423508|gb|AAK24008.1| aspartate racemase [Caulobacter crescentus CB15] gi|220964222|gb|ACL95578.1| aspartate racemase [Caulobacter crescentus NA1000] Length = 222 Score = 42.6 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 14/141 (9%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L + IACNTA +++R++ + + + AA + ++ Sbjct: 59 VLAAMAAGLRDSGAQVLAIACNTAHAYA-EDVRAS--GLPLIDILETAGLAARAQGASVV 115 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T L + + V ++ +VE A +IK ++ + + Sbjct: 116 GVLGTS--LALGLYRDRFTALG-----LEVVTLDDHEQVEFMALLYRIKRGDVGRASQDA 168 Query: 184 FIEKEGKRTD----VIVLACT 200 + D +V CT Sbjct: 169 MAALARRLIDKGAQAVVAGCT 189 >gi|153864530|ref|ZP_01997405.1| aspartate racemase [Beggiatoa sp. SS] gi|152145974|gb|EDN72594.1| aspartate racemase [Beggiatoa sp. SS] Length = 216 Score = 42.6 bits (100), Expect = 0.059, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 22/83 (26%) Query: 70 DILDKYQPVLSVIACNTAFT---LIKDELRSTFPSMAFLGAVPAIKQAAAYTQ------- 119 L+ V+ CNTA ++ +L+ +P I TQ Sbjct: 79 KFLESAGVDFIVVPCNTAHAFHEQVQSQLQ-----------IPWIHLIDCTTQFLVDNYQ 127 Query: 120 -SGLISILSTPATLRRTYTSNLI 141 + + IL+T TL+ N + Sbjct: 128 DTKKVGILATDGTLQSQLYHNSL 150 >gi|225017475|ref|ZP_03706667.1| hypothetical protein CLOSTMETH_01402 [Clostridium methylpentosum DSM 5476] gi|224949714|gb|EEG30923.1| hypothetical protein CLOSTMETH_01402 [Clostridium methylpentosum DSM 5476] Length = 239 Score = 42.6 bits (100), Expect = 0.060, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 29/102 (28%), Gaps = 8/102 (7%) Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR 161 + FL V IL+T T+ + + ++ I + Sbjct: 99 VPFLNMVAETVAHLKQNGVKRAGILATTGTIHTQLFQKELEKQGLE---WVIPCEIGQEQ 155 Query: 162 VEEYACGIKIKEDEIKKEIEGCFI---EKEGKRTDVIVLACT 200 V + E++ + + + ++L CT Sbjct: 156 VMHLIYNNVKAGQPV--ELDRFELVSSKLREAGAECLILGCT 195 >gi|229164447|ref|ZP_04292374.1| Aspartate racemase [Bacillus cereus R309803] gi|228619020|gb|EEK75919.1| Aspartate racemase [Bacillus cereus R309803] Length = 238 Score = 42.6 bits (100), Expect = 0.062, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 11/158 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L VIACNTA + ++ L + + +L+T T Sbjct: 75 LQNAGADFLVIACNTA--HFFYKAVKRSVNIPILHMPLETARFVQENNFRKVGLLATDGT 132 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190 ++ N + + + +V + IK + +K + Sbjct: 133 IKTELYQNSCQ--NCRIDVIE-PDKEMQKKVMKGIYAIKSGNLKTGCLYLSMVADKLKES 189 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 + I+ CT PL++ + ++ ++ +A+ Sbjct: 190 GAEAIIAGCTEVPLVLKS-----SKNICVINPTEIVAK 222 >gi|300789528|ref|YP_003769819.1| aspartate racemase [Amycolatopsis mediterranei U32] gi|299799042|gb|ADJ49417.1| aspartate racemase [Amycolatopsis mediterranei U32] Length = 240 Score = 42.6 bits (100), Expect = 0.062, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 30/97 (30%), Gaps = 7/97 (7%) Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + +L T T+ + + + + ++ + L R+ + + + E ++ Sbjct: 117 VRRVGLLGTGFTMGQPFYRDRLAAHGLDVLVPSAEDRDLVHRIIYDELVLGVVKPESREA 176 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP 216 G G + ++ CT L Sbjct: 177 YRGVIARLAGAGAEGVIYGCT-------EIELLVGPQ 206 >gi|86156956|ref|YP_463741.1| aspartate racemase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773467|gb|ABC80304.1| Aspartate racemase [Anaeromyxobacter dehalogenans 2CP-C] Length = 234 Score = 42.6 bits (100), Expect = 0.062, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 9/132 (6%) Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151 LR P + V A ++ ++ T T+ + + + + + Sbjct: 91 LAALRPRSP-LPIADLVGATCDDVRAAGHRVVGLVGTRFTVSEPFFREALEAAGVRVVVP 149 Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIVHVFR 210 + + K E+K E+ G+ D +V+ACT Sbjct: 150 DEAGTDYLDALIFGPLARGEKTPEMKGELAAIVGRMAGRAPLDALVVACT-------DLM 202 Query: 211 QLSPWPVDWLDN 222 L V LD Sbjct: 203 DLMGTEVRLLDP 214 >gi|332143389|ref|YP_004429127.1| aspartate racemase [Alteromonas macleodii str. 'Deep ecotype'] gi|327553411|gb|AEB00130.1| aspartate racemase [Alteromonas macleodii str. 'Deep ecotype'] Length = 231 Score = 42.6 bits (100), Expect = 0.063, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 49/152 (32%), Gaps = 12/152 (7%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+W ++ + L+ VI NT + D + S+ + A Sbjct: 55 GDWSK---TADILTQEARNLELAGAKALVICTNTMHKVA-DTIEQNI-SVPLIHIADATG 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 + +L T T+ + + + I + +I +++ + ++ Sbjct: 110 NELQQHSVKKVGLLGTRFTMEQPFYRSRIE---NNFNIDVITPNARQRDIVHKIIYEQLC 166 Query: 173 EDEI----KKEIEGCFIEKEGKRTDVIVLACT 200 + I + GK + I+L CT Sbjct: 167 KGVICVDSRNAYIEIINALAGKGAEGIILGCT 198 >gi|283955529|ref|ZP_06373024.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni 1336] gi|283792990|gb|EFC31764.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni 1336] Length = 231 Score = 42.6 bits (100), Expect = 0.065, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 4/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +IA NT + DE++ ++ L + +A Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L T T+ + + LI +S I+ + C KIK+D +K + Sbjct: 119 KIGLLGTKYTMTQDFYKKILIEENISVITPSDEDIKIVNDIIFNELCKGKIKQDSKEKYL 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + K ++LACT Sbjct: 179 -NIIKKLQEKGAKGVLLACT 197 >gi|170750685|ref|YP_001756945.1| aspartate racemase [Methylobacterium radiotolerans JCM 2831] gi|170657207|gb|ACB26262.1| aspartate racemase [Methylobacterium radiotolerans JCM 2831] Length = 250 Score = 42.6 bits (100), Expect = 0.065, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 43/138 (31%), Gaps = 13/138 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS---------GL 122 L+ I CNTA ++ L V A+ + A T++ G Sbjct: 68 LEAGGATRIAIPCNTA--HHWHAALQAGTALPILHIVDAVAETLARTETETGIAAGTGGR 125 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L+T TLR + C + ++ E + +E Sbjct: 126 VGLLATDGTLRTGLYRERLARRGLTCLGPDPEGQAAVAAAIRLVKAHRVAEA--RPLLEA 183 Query: 183 CFIEKEGKRTDVIVLACT 200 D +V+ACT Sbjct: 184 QVRALAEAGCDRVVMACT 201 >gi|154148024|ref|YP_001406048.1| aspartate racemase [Campylobacter hominis ATCC BAA-381] gi|153804033|gb|ABS51040.1| aspartate racemase [Campylobacter hominis ATCC BAA-381] Length = 226 Score = 42.6 bits (100), Expect = 0.066, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 60/169 (35%), Gaps = 28/169 (16%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA----VPAIKQAAAYTQSGLISILS 127 L + +ACNTA D L + L V AIK+ Y +++LS Sbjct: 70 LKQSGCDAFCMACNTA-HFFADRLVEQ-SGLPILHIAKITVNAIKK--EYKNVKKVAVLS 125 Query: 128 TPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKE-----DEIKKEIE 181 T T + N + I ++ L S + + KI++ EI EI+ Sbjct: 126 TIGTQKAGIYDNELKKNGFLTADISQIAMKKLMSCIYDGVKAGKIEDFVPKFKEILNEID 185 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 D+ + ACT PL + +D ++ +A+ Sbjct: 186 A----------DIYIAACTEIPLFLPYI----GDDKIIIDATNELAKEI 220 >gi|328955321|ref|YP_004372654.1| aspartate racemase [Coriobacterium glomerans PW2] gi|328455645|gb|AEB06839.1| aspartate racemase [Coriobacterium glomerans PW2] Length = 250 Score = 42.2 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 43/148 (29%), Gaps = 23/148 (15%) Query: 72 LDKYQPVLSVIACNT---------AFTLI--KDELRS--TFPSMAFLG----AVPAIKQA 114 L+ I CNT A T + +R + L PA Sbjct: 71 LESLGCANIAIPCNTSHYYYDQIRASTNVPIIHMVREAVRYAVFGVLPDTASIDPACAPR 130 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRV-EEYACGIKIK 172 A I I++T T+ ++ V + S + ++ G Sbjct: 131 APRMPPRRIGIMATDGTIMSGVYHRACRAFGVEPIEPDESRQRDVMSLIYDDVKAGRDPD 190 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200 D+ + + D ++LACT Sbjct: 191 MDKFDRVVRA----FRADGCDRVILACT 214 >gi|299770526|ref|YP_003732552.1| Hydantoin racemase [Acinetobacter sp. DR1] gi|298700614|gb|ADI91179.1| Hydantoin racemase [Acinetobacter sp. DR1] Length = 244 Score = 42.2 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 69/197 (35%), Gaps = 38/197 (19%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +++ + L VIAC R S +G A + A+Y Sbjct: 59 EEIRQ------GEFL---GVDAYVIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASY 106 Query: 118 TQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDE 175 +G S+++T T+ ++ +L H Y + V + I VEE Sbjct: 107 VSTG-FSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRT 160 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARR 229 I+ E + E + D IVL C + + V +D + ++ Sbjct: 161 IRDECKKALAEDKS---DAIVLGC------AGMSDLCLKLQNELG--VIVIDGVAAAVKQ 209 Query: 230 ARCLLPRINTHQTRVFD 246 A +L ++N ++V D Sbjct: 210 AE-MLVQLNLKTSKVGD 225 >gi|255523215|ref|ZP_05390186.1| aspartate racemase [Clostridium carboxidivorans P7] gi|296186180|ref|ZP_06854585.1| aspartate racemase [Clostridium carboxidivorans P7] gi|255513083|gb|EET89352.1| aspartate racemase [Clostridium carboxidivorans P7] gi|296049448|gb|EFG88877.1| aspartate racemase [Clostridium carboxidivorans P7] Length = 231 Score = 42.2 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 50/156 (32%), Gaps = 12/156 (7%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQ 113 L ++ + + D VI NT A + + L A + Sbjct: 58 EELTDIMVNIAKKLKDAGA-DFIVICTNTMHKMANAI------ENRVGIKVLHIAEATGE 110 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 +++L T T+++ + ++ + I + + + I Sbjct: 111 KVIDNGLKKVALLGTIFTMKQDFYKKVLKEKFNIDVIIPNEADSEIVHEIIYTELCKGII 170 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208 + K++ + E + ++L CT PL++ Sbjct: 171 NESSKEKYKKIIKNLELNGAEGVILGCTEIPLLIKQ 206 >gi|212712021|ref|ZP_03320149.1| hypothetical protein PROVALCAL_03097 [Providencia alcalifaciens DSM 30120] gi|212685543|gb|EEB45071.1| hypothetical protein PROVALCAL_03097 [Providencia alcalifaciens DSM 30120] Length = 231 Score = 42.2 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 40/130 (30%), Gaps = 3/130 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L V+ NT + ++ + FL A + + I +L T T Sbjct: 71 LKAAGADFLVLCTNTMHKVA-PQIEEK-SKLPFLHIADATGEKITQSGIKTIGLLGTAFT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + L + + + + + + + I D E + Sbjct: 129 MEQAFYKDRLTDKFNLRVITPNEADRKIVHDIIYHELCLGIISDTSHTEYQRIMKTLVEH 188 Query: 191 RTDVIVLACT 200 + I+L CT Sbjct: 189 GAEGIILGCT 198 >gi|218508038|ref|ZP_03505916.1| probable hydantoin racemase protein [Rhizobium etli Brasil 5] Length = 247 Score = 42.2 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 32/177 (18%) Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123 L S++ ++ +VIAC + RS F + LG AI A Q + Sbjct: 57 LLSELKERQAAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAIATAGFLAQRFTV 113 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 T R NL+ Y + +S I +EE A G +++ EIE Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGARAKVRASDIPVLELEEAASGAI---GKLRAEIERA 167 Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDN---------SDSIAR 228 E + IVL C T + +++ V +D +AR Sbjct: 168 LEE---DGAEAIVLGCAGMT---DLARQLQEIYG--VPVVDGVSAAVQAGRGAGLAR 216 >gi|332141686|ref|YP_004427424.1| aspartate racemase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551708|gb|AEA98426.1| aspartate racemase [Alteromonas macleodii str. 'Deep ecotype'] Length = 231 Score = 42.2 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 49/152 (32%), Gaps = 12/152 (7%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+W ++ + L+ VI NT + D + S+ + A Sbjct: 55 GDWSK---TADILTQEARNLELAGAKALVICTNTMHKVA-DTIEQNI-SVPLIHIADATG 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 + +L T T+ + + + I + +I +++ + ++ Sbjct: 110 NELQQHGVKKVGLLGTRFTMEQPFYWSRIE---NNFNIDVITPNAQQRDIVHKIIYEQLC 166 Query: 173 EDEI----KKEIEGCFIEKEGKRTDVIVLACT 200 + I + GK + I+L CT Sbjct: 167 KGVICVDSRNAYIEIIDALAGKGAEGIILGCT 198 >gi|183598906|ref|ZP_02960399.1| hypothetical protein PROSTU_02344 [Providencia stuartii ATCC 25827] gi|188021116|gb|EDU59156.1| hypothetical protein PROSTU_02344 [Providencia stuartii ATCC 25827] Length = 231 Score = 42.2 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 5/144 (3%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 L + + +++ V+ NT + + ++ L A + + Sbjct: 58 ELAGQYLAQAGKNVEQASADFVVLCTNTMHKVAEQI--ENNINIPLLHIADATGERIINS 115 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKEDEI 176 I +L T T+ + + + +H + + I+ + + C KI Sbjct: 116 GIRKIGLLGTAFTMEQPFYKDRLHEKYNLSVLTPNDQDRKIVHDIIYQELCLGKITTGS- 174 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 KK+ + + I+L CT Sbjct: 175 KKQYQRIMASLVENGAEGIILGCT 198 >gi|319935192|ref|ZP_08009631.1| aspartate racemase [Coprobacillus sp. 29_1] gi|319809842|gb|EFW06230.1| aspartate racemase [Coprobacillus sp. 29_1] Length = 238 Score = 42.2 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 47/139 (33%), Gaps = 2/139 (1%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 R++ + L+K I NT ++ L + + A Q Sbjct: 61 ARILTEAAQSLEKAGADYICICTNTMHKVV--TLIQQGIHIPIIHIAEATAQKLQQEHIQ 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 +++L T T+ + + + + S + + + + + + ++ K++ Sbjct: 119 KVALLGTKYTMTQMFYKQKLIDAKIDVLVPSESDIEIVNNIIYNELCLGVISNDSKEKYI 178 Query: 182 GCFIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 179 KIIKDLVLQGAQGVILGCT 197 >gi|229590471|ref|YP_002872590.1| putative aspartate racemase [Pseudomonas fluorescens SBW25] gi|229362337|emb|CAY49239.1| putative aspartate racemase [Pseudomonas fluorescens SBW25] Length = 230 Score = 42.2 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 8/140 (5%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L V+ NT L+ + + S+ FL A AA + + Sbjct: 63 ILEDAARRLQAGGAECVVLCTNTM-HLVAPRIEAAV-SIPFLHIADAAGAAAVDAGTLTV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQ---CHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 +L T T+ + + LI +Q + + R+ + + D ++ Sbjct: 121 GLLGTAFTMEQDF---LISRLAAQGLTVLVPEADARQAVHRIIYEELCVGVISDTSRQVY 177 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 178 QRVIESLAARGAQAIILGCT 197 >gi|10121334|gb|AAG13133.1| glutamate racemase [Helicobacter pylori] Length = 76 Score = 42.2 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 8/76 (10%) Query: 198 ACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251 CTH+PLI P P + + D+I + F Sbjct: 1 GCTHFPLIAQKIEGYFMEHFALPTPPLLIHSGDAIVGYLQQ--KYALKKNACAFPKVEFH 58 Query: 252 LSGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 ASGDVIWLEKQAKEWL 74 >gi|89896850|ref|YP_520337.1| hypothetical protein DSY4104 [Desulfitobacterium hafniense Y51] gi|89336298|dbj|BAE85893.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 231 Score = 42.2 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 5/148 (3%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G WE ++ + L+ V+ NT + DE+++ + L Sbjct: 55 GEWEKA---AEILANAAGSLEAAGAEFIVLCTNTMHKVA-DEIQAGL-QIPLLHIADMTA 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 Q A I +L T T+ + + + + + + + + V + I Sbjct: 110 QQALTNNIRTIGLLGTRYTMEQDFYRSRLEAQGIKVLTPEEGDKAVVNEVIYQELCLGII 169 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200 E + + + + + IVL CT Sbjct: 170 NQESRNQFKRIIADLVEQGAQGIVLGCT 197 >gi|257468637|ref|ZP_05632731.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185] gi|317062894|ref|ZP_07927379.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185] gi|313688570|gb|EFS25405.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185] Length = 235 Score = 42.2 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 25/173 (14%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS-G 121 M ++ L K +I NTA DE+ S + FL + A+K+ Sbjct: 64 AMVATAENLKKAGADFIIIGANTA-HYFYDEVASQV-DIPFLHIIDEAVKEMMRQVPGIK 121 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIK---IKEDEIK 177 + +++T A ++ + I ++++ ++V + K + E +K Sbjct: 122 KVGVMATNAAVKIKLYDKCCAKFG----IEVIAAKEEVQNKVHDTIFDFKYNGVTEKNVK 177 Query: 178 KE--IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSI 226 FIE + +++ CT P+I+ V +D +D I Sbjct: 178 DATDCAEYFIE---NGAEALIMGCTEIPIILK------GKSFTVPLIDPNDII 221 >gi|311694294|gb|ADP97167.1| aspartate racemase [marine bacterium HP15] Length = 231 Score = 42.2 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 + K VI NT + + ++ + L A Q +L T T Sbjct: 71 VQKAGADFLVIGTNTMHKVAPEIEQA--IGIPLLHIADATAQLLKKEGVTRAGLLGTRFT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + + S RV EE G + + G Sbjct: 129 MEQAFYRERLEAAGIDVLTPDESQRDEVHRVIYEELCQGEIKPDS--RHTYLDIVSSLSG 186 Query: 190 KRTDVIVLACT 200 + ++L CT Sbjct: 187 RGAQAVILGCT 197 >gi|313897176|ref|ZP_07830720.1| aspartate racemase [Clostridium sp. HGF2] gi|312957897|gb|EFR39521.1| aspartate racemase [Clostridium sp. HGF2] Length = 236 Score = 42.2 bits (99), Expect = 0.077, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 49/139 (35%), Gaps = 6/139 (4%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+ +I NT + ++ + + A + + Sbjct: 63 ILGKAAQGLEAAGADFILICTNTMHKVAPQI--ASMIHIPIIHIADATAEELLNHNIHKV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEIE 181 +L T T+ + + + + + ++ I + C +IKED +K+ + Sbjct: 121 GLLGTKYTMTQDFYKQKLVERGIEVIVPE-ATEIEVINHIIFHELCVGQIKEDS-RKKFQ 178 Query: 182 GCFIEKEGKRTDVIVLACT 200 + + + ++L CT Sbjct: 179 SIIERMKSRGAEGVILGCT 197 >gi|269104255|ref|ZP_06156951.1| aspartate racemase [Photobacterium damselae subsp. damselae CIP 102761] gi|268160895|gb|EEZ39392.1| aspartate racemase [Photobacterium damselae subsp. damselae CIP 102761] Length = 353 Score = 42.2 bits (99), Expect = 0.078, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 71/190 (37%), Gaps = 19/190 (10%) Query: 59 ALKKRLMFLFSDILDKYQPVLSV-IACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115 L+K ++ L +Y V + +ACN+A + R+ P + + + + Sbjct: 62 ELRKYATATYTLRLMQYLDVKVMGLACNSA----HELFRTILPQIPVHFVDMIKQTAASL 117 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKE- 173 ++ I ++ + + + + V L + + + GIK + Sbjct: 118 EGSED-TILVMGVNSLVDSGLYQSALADQGVKSTKPSLENQQKVMDAIYHPEFGIKTAKI 176 Query: 174 -DEIKKEIEGCFIEKEGKRTDV-IVLACTHYPL-IVHV----FRQ--LSPWPVDWLDNSD 224 + ++ + ++ K+ IVL CT PL + F+Q L P + +D S Sbjct: 177 TPQAEQLLCEVICDELAKQGCTKIVLGCTELPLALTAESCLRFKQQGLLPPEITVIDASM 236 Query: 225 SIARRARCLL 234 +A+ L Sbjct: 237 VLAQSLISTL 246 >gi|238927053|ref|ZP_04658813.1| aspartate racemase [Selenomonas flueggei ATCC 43531] gi|238885033|gb|EEQ48671.1| aspartate racemase [Selenomonas flueggei ATCC 43531] Length = 230 Score = 42.2 bits (99), Expect = 0.080, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 42/214 (19%) Query: 12 LQNSILIFDSGIGGLI---------VLQK-MRFLMPEYH----FIYVADDVGFPYGNWED 57 + +I + IGG+ V+ + ++ + H +Y D Sbjct: 1 MMKTIGL----IGGMSWESTVTYYQVINETIKKQLGGLHSAKCILYSVD----------F 46 Query: 58 HALKKR-----------LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG 106 ++K ++ + L++ VI NT + + R + L Sbjct: 47 DEIEKYQASGEWDKSADVLSEAAQALERAGADYIVICTNTMHKVTPEIGRRIH--IPILH 104 Query: 107 AVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166 + +L T T+++ + N++ + I ++ + + Sbjct: 105 IADMTAVQLKKHGIRKVGLLGTKYTMQQDFYKNVLIRQGIEVIIPNDDVDVVNRIIYDEL 164 Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 C KI E+ K E I+L CT Sbjct: 165 CLGKILEES-KAVYLDIIHELARNGAQGIILGCT 197 >gi|157414398|ref|YP_001481654.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni 81116] gi|157385362|gb|ABV51677.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni 81116] gi|307747042|gb|ADN90312.1| Putative aspartate racemase [Campylobacter jejuni subsp. jejuni M1] Length = 231 Score = 42.2 bits (99), Expect = 0.080, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 4/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +IA NT + DE++ ++ L + +A Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L T T+ + + LI +S I+ + C +IK+D +K + Sbjct: 119 KIGLLGTKYTMTQDFYKKILIEENISVITPSDEDIKIVNDIIFNELCKGEIKQDSKEKYL 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + K ++LACT Sbjct: 179 -NIINKLQEKGAKGVLLACT 197 >gi|253582891|ref|ZP_04860109.1| aspartate racemase subfamily protein [Fusobacterium varium ATCC 27725] gi|251835097|gb|EES63640.1| aspartate racemase subfamily protein [Fusobacterium varium ATCC 27725] Length = 235 Score = 42.2 bits (99), Expect = 0.080, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 23/172 (13%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GL 122 M ++ L K +I NTA DE+ S A+K+ Sbjct: 64 AMVATAENLKKAGADFIIIGANTA-HYFYDEVASQVDIPFLHIIEEAVKEMMRQVPGIKK 122 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIK---IKEDEIKK 178 + +++T A ++ + I ++++ ++V + K + E +K Sbjct: 123 VGVMATNAAVKIKLYDKCCAKFG----IEVIAAKEDVQNKVHDTIFDFKYNGVTEKNVKD 178 Query: 179 E--IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSI 226 FIE + +++ CT P+I+ V +D +D I Sbjct: 179 ATDCAEYFIE---NGAEALIMGCTEIPIILK------GKSFTVPLIDPNDII 221 >gi|238064313|ref|ZP_04609022.1| aspartate/glutamate racemase [Micromonospora sp. ATCC 39149] gi|237886124|gb|EEP74952.1| aspartate/glutamate racemase [Micromonospora sp. ATCC 39149] Length = 240 Score = 42.2 bits (99), Expect = 0.080, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 37/110 (33%), Gaps = 1/110 (0%) Query: 91 IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHI 150 + D++++ S+ L A +A + +L T T+ + + + + + + + Sbjct: 89 VADQVQAAV-SIPLLHLGDATAEAVTAAGLHTVGLLGTAFTMEQAFYRDRLARHGLRVIV 147 Query: 151 HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 R+ + + ++ + ++L CT Sbjct: 148 PEPDDRAEVHRIIYDELCLGEVREASRQTYQKVIERLVRSGAQGVILGCT 197 >gi|291165619|gb|EFE27668.1| aspartate racemase [Filifactor alocis ATCC 35896] Length = 233 Score = 42.2 bits (99), Expect = 0.081, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 14/136 (10%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTP 129 L++ V+ CNTA DE++ K+ + + ++++ST Sbjct: 72 FLEESGAEFLVMPCNTA-HYFYDEIKKHIHIPFLHIVEETTKEILKHKDTVHKVALISTT 130 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLV-----SSMILASRVEEYACGIKIKEDEIKKEIEGCF 184 T + + Q + L+ ++ + G D + K ++ Sbjct: 131 GTYSCGLYQDA---FAKQKDVDLLLPDEDGKSLIMDMLYAIKSGQPKNPDALMKLLDD-- 185 Query: 185 IEKEGKRTDVIVLACT 200 ++G + D + L CT Sbjct: 186 FMQQGAQ-DFL-LGCT 199 >gi|161508037|ref|YP_001578004.1| aspartate racemase [Lactobacillus helveticus DPC 4571] gi|160349026|gb|ABX27700.1| Aspartate racemase [Lactobacillus helveticus DPC 4571] gi|323467272|gb|ADX70959.1| Aspartate racemase [Lactobacillus helveticus H10] gi|323467315|gb|ADX71002.1| Aspartate racemase [Lactobacillus helveticus H10] Length = 249 Score = 42.2 bits (99), Expect = 0.081, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 15/135 (11%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127 DK V+ CNTA D+L + FL ++ A Y I +++ Sbjct: 73 DKLGTDFLVMPCNTA-HYFYDDL-AALTDKPFLHM---MRIAVHNFIDNYPDEKKIGLIA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186 T ++ ++ I + + V E ++ + ++ Sbjct: 128 TEGSIYDHLYADEIQKVGRTVE---LGGPEIQPMVNELIYSDIKEKGIVDHDLYHKILKT 184 Query: 187 KEGK-RTDVIVLACT 200 K +VI+L CT Sbjct: 185 MHDKYGCNVILLGCT 199 >gi|264679908|ref|YP_003279817.1| aspartate racemase [Comamonas testosteroni CNB-2] gi|262210423|gb|ACY34521.1| aspartate racemase [Comamonas testosteroni CNB-2] Length = 242 Score = 42.2 bits (99), Expect = 0.082, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 5/103 (4%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159 S+ FL + A ++ +L T T+ + + L + + + + Sbjct: 109 SIPFLHIADPVGATARAAGVQVLGLLGTRFTMEQPFMRERLEQQFGLKVLVPGEAERAQV 168 Query: 160 SRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 R+ EE G D +K + + +VL CT Sbjct: 169 HRIIYEELCAGQI--SDVSRKLYQRAIESLAARGAQAVVLGCT 209 >gi|67902860|ref|XP_681686.1| hypothetical protein AN8417.2 [Aspergillus nidulans FGSC A4] gi|40747883|gb|EAA67039.1| hypothetical protein AN8417.2 [Aspergillus nidulans FGSC A4] gi|259484353|tpe|CBF80499.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 627 Score = 42.2 bits (99), Expect = 0.082, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 47/157 (29%), Gaps = 18/157 (11%) Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHI 150 LR + +G + A AA T G I+ T + R + I Y + Sbjct: 466 IKALREELTT-PVVGIMEASLFAAR-TLGGRFGIVVTSS--RSGVLHTDSIRRYGYEGFS 521 Query: 151 HLVSSMILASR-VEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC---THYPLIV 206 V S L +E E E+ + G + + DVI L C T + Sbjct: 522 IGVESCGLGVLGLERK------GEQEVLDAMCGAARKLVERGADVITLGCAGMT---KLK 572 Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243 + + +D + LL R Sbjct: 573 EAVEEAVGPEIQVVDGVVAGVHHLIGLLRMGGRTAKR 609 >gi|300362911|ref|ZP_07059081.1| aspartate racemase [Lactobacillus gasseri JV-V03] gi|300352961|gb|EFJ68839.1| aspartate racemase [Lactobacillus gasseri JV-V03] Length = 249 Score = 42.2 bits (99), Expect = 0.082, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPA 130 K P V+ CNTA D+L + + FL + K + + I +++T Sbjct: 73 AKLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHMMRIAVHKFVDDFPKEEKIGLIATEG 130 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIEKEG 189 ++ + + + + + V E ++ + ++ Sbjct: 131 SIYDHLYVDELERVGKKVE---LGGPEIQPMVNELIYSDIKEKGIVDHDLYHKILKTMHD 187 Query: 190 K-RTDVIVLACT 200 K +VI+L CT Sbjct: 188 KYGCNVILLGCT 199 >gi|260555327|ref|ZP_05827548.1| hydantoin-racemase [Acinetobacter baumannii ATCC 19606] gi|260411869|gb|EEX05166.1| hydantoin-racemase [Acinetobacter baumannii ATCC 19606] Length = 244 Score = 42.2 bits (99), Expect = 0.084, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 77/220 (35%), Gaps = 41/220 (18%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +++ ++LD VIAC R S +G A + A+Y Sbjct: 59 EEIRQ------GELLD---VDAYVIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASY 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEI 176 +G + + T+ ++ +L H Y + V + I VEE I Sbjct: 107 VSTGFSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRTI 161 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRA 230 + E + E + D IVL C + + V +D + ++A Sbjct: 162 RDECKKALAEDKS---DAIVLGC------AGMSDLCLKLQNEL--EVIVIDGVAAAVKQA 210 Query: 231 RCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 +L ++N ++V D + P ++ GFG++ Sbjct: 211 E-MLVQLNLKTSKVGD-----WASPPVKNYTGILSGFGVR 244 >gi|52143230|ref|YP_083598.1| aspartate racemase [Bacillus cereus E33L] gi|51976699|gb|AAU18249.1| aspartate racemase [Bacillus cereus E33L] Length = 232 Score = 42.2 bits (99), Expect = 0.084, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 10/133 (7%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ + ++ + L A + + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-ERIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY----ACGIKIKEDEIKKEIEGCFIEK 187 + + + I + + +V S ++ E C KI ++ + Sbjct: 129 MEQDFYKIRIEE--NHIKV-MVPSEKDRDKINEVIYTELCLGKITSQS-REYYKRVIENL 184 Query: 188 EGKRTDVIVLACT 200 + I+L CT Sbjct: 185 IQEGAQGIILGCT 197 >gi|83643337|ref|YP_431772.1| aspartate racemase [Hahella chejuensis KCTC 2396] gi|83631380|gb|ABC27347.1| Aspartate racemase [Hahella chejuensis KCTC 2396] Length = 230 Score = 41.9 bits (98), Expect = 0.089, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 9/133 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ +IA NT + + R ++ L A +++L T T Sbjct: 71 LERAGAQAMLIATNTMHKVAPEVERRL--TIPLLHIADAAADELQRNGHKKVALLGTRYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILAS----RVEEYACGIKIKEDEIKKEIEGCFIEK 187 ++ + IH + + S EE G + + Sbjct: 129 MQLDFYKTRIHD-ATGIAVITPESAQQEEINRIIYEELCRGELLPSS--RDFYYRVIENL 185 Query: 188 EGKRTDVIVLACT 200 + + ++L CT Sbjct: 186 ASQGAEGVILGCT 198 >gi|239831308|ref|ZP_04679637.1| aspartate racemase [Ochrobactrum intermedium LMG 3301] gi|239823575|gb|EEQ95143.1| aspartate racemase [Ochrobactrum intermedium LMG 3301] Length = 274 Score = 41.9 bits (98), Expect = 0.090, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 42/138 (30%), Gaps = 3/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 LM + L++ +I NT + D + S+ + + + Sbjct: 105 LMIEAAQNLERGGADFILICTNTMHKMADDI--ESATSIPLVHIADPTAEKIKAAGLSKV 162 Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T+ + + L + + + + + D +++ Sbjct: 163 GLLGTAFTMEQDFYKGRLAAKHGLEVLTPDDADRKTVHDIIYQELVVGEVRDASREKYRA 222 Query: 183 CFIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 223 VINRLVRRGAEAIILGCT 240 >gi|90414492|ref|ZP_01222467.1| hypothetical aspartate racemase [Photobacterium profundum 3TCK] gi|90324400|gb|EAS40962.1| hypothetical aspartate racemase [Photobacterium profundum 3TCK] Length = 236 Score = 41.9 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 49/138 (35%), Gaps = 6/138 (4%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 + + L + V+ CNTA L ++ ++ + + ++ A + + + Sbjct: 63 ALKQGMEQLQQAGAECIVMPCNTA-HYWYTRLTNSC-NVHTISIIDSVVSEAKHRRYQTV 120 Query: 124 SILSTPAT-LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+T AT + Y + L ++ + + + G ++ + Sbjct: 121 GLLATTATMMAGMYQTKLAQQQINAIETTDSEQQAIMNGIYAVKAGNVEHGKQLM---QP 177 Query: 183 CFIEKEGKRTDVIVLACT 200 F + + ++ CT Sbjct: 178 VFEAMLNRGAEAVIFGCT 195 >gi|257460061|ref|ZP_05625165.1| aspartate racemase [Campylobacter gracilis RM3268] gi|257442502|gb|EEV17641.1| aspartate racemase [Campylobacter gracilis RM3268] Length = 226 Score = 41.9 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 64/206 (31%), Gaps = 35/206 (16%) Query: 45 ADDVGFPYGNWEDHALKKRLMFLFSDI-------------LDKYQPVLSVIACNTAFTLI 91 D P ++ R F+ L +ACNTA Sbjct: 30 GDQENIPLVIDSYPQIEDRTAFILGKGENPLPRLSESAVRLKNAGCRAFAMACNTA-HFF 88 Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGL-ISILSTPATLRRTYTSNLIHSYVSQCHI 150 D++ + A +K + I++L+T T + + + Sbjct: 89 ADDVEAAAEIPLIHIAEVTVKAIRKNYPNAHKIAVLATIGTKKAKIYDDPLKE------- 141 Query: 151 HLVSSMILASRVEEY-----ACGIKIKEDEIKKEIEGCFIEKEGK-RTDVIVLACTHYPL 204 + +I EE C K + E G F GK D+ V+ACT PL Sbjct: 142 ---AGLISVDLGEENQAVLMDCIYKGVKAGKTAEYVGAFENLLGKIDADIYVVACTELPL 198 Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRA 230 + + + ++D + +A+ Sbjct: 199 FLPLIK----SDKIFVDPTRELAKAI 220 >gi|325285294|ref|YP_004261084.1| aspartate racemase [Cellulophaga lytica DSM 7489] gi|324320748|gb|ADY28213.1| aspartate racemase [Cellulophaga lytica DSM 7489] Length = 254 Score = 41.9 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 51/150 (34%), Gaps = 17/150 (11%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + + + ++ + I CNTA LI+ + + + + + A + Sbjct: 67 ISEIIATLIASGS-NIIAIPCNTAHAKPIFNLIEKSIPESCILVNLIE-EVGLYIATKHP 124 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS---SMILA-SRVEEYACGIKIKED 174 + + +L T T+ +++ Y + S + + + GIK + Sbjct: 125 EITRVGVLGTTGTILAKVYPDVLAKYN--IEVIQPSEDIQNLFVHPSIYDANYGIKAFSN 182 Query: 175 EIKKEIEGCFIE----KEGKRTDVIVLACT 200 + ++ + K ++L CT Sbjct: 183 PVNQKAKENLSMAATYLSRKGAQAVILGCT 212 >gi|317486428|ref|ZP_07945255.1| aspartate racemase [Bilophila wadsworthia 3_1_6] gi|316922338|gb|EFV43597.1| aspartate racemase [Bilophila wadsworthia 3_1_6] Length = 238 Score = 41.9 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 39/137 (28%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 L+ + L++ +I NT + + S+ L + Sbjct: 63 LLAEAARGLERAGADCVLICTNTMHKVA--DAVQAATSLPLLHIAELTADELEAAGVSTV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + + I +RV + + ++ Sbjct: 121 GLLGTRYTMEQDFYTRKLVERGITVLIPEEDGRAFVNRVIFDELCLGTVSESSRRAFAAI 180 Query: 184 FIEKEGKRTDVIVLACT 200 + ++L CT Sbjct: 181 IGGLTARGAQGVILGCT 197 >gi|54309523|ref|YP_130543.1| aspartate racemase [Photobacterium profundum SS9] gi|46913959|emb|CAG20741.1| hypothetical aspartate racemase [Photobacterium profundum SS9] Length = 226 Score = 41.9 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 49/138 (35%), Gaps = 6/138 (4%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 + + L + V+ CNTA L ++ ++ + + ++ A + + + Sbjct: 53 ALKEGMEQLQQAGAECIVMPCNTA-HYWYTRLTNSC-NVHTISIIDSVVDEAKHRRYRTV 110 Query: 124 SILSTPAT-LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L+T AT + Y + L ++ + + + G ++ + Sbjct: 111 GLLATTATMMAGMYQTKLAQQQINAIETTDSEQQAIMNGIYAVKAGNVEHGKQLM---QP 167 Query: 183 CFIEKEGKRTDVIVLACT 200 F + + ++ CT Sbjct: 168 VFEAMLNRGAEAVIFGCT 185 >gi|229196449|ref|ZP_04323195.1| hypothetical protein bcere0001_20080 [Bacillus cereus m1293] gi|228587019|gb|EEK45091.1| hypothetical protein bcere0001_20080 [Bacillus cereus m1293] Length = 235 Score = 41.9 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +I NT + ++++ + L A + + +L T T Sbjct: 74 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 131 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + L + + V E I + E K + ++K Sbjct: 132 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 191 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 192 AQGI---ILGCT 200 >gi|324326258|gb|ADY21518.1| aspartate racemase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 232 Score = 41.9 bits (98), Expect = 0.098, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +I NT + ++++ + L A + + +L T T Sbjct: 71 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + L + + V E I + E K + ++K Sbjct: 129 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 188 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 189 AQGI---ILGCT 197 >gi|47570153|ref|ZP_00240809.1| aspartate racemase [Bacillus cereus G9241] gi|47553172|gb|EAL11567.1| aspartate racemase [Bacillus cereus G9241] Length = 232 Score = 41.9 bits (98), Expect = 0.098, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +I NT + ++++ + L A + + +L T T Sbjct: 71 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + L + + V E I + E K + ++K Sbjct: 129 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 188 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 189 AQGI---ILGCT 197 >gi|283955428|ref|ZP_06372926.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni 414] gi|283793055|gb|EFC31826.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni 414] Length = 227 Score = 41.9 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 53/140 (37%), Gaps = 4/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +I NT + DE++ + ++ L + +A Sbjct: 61 AQILSECAKKLELAGVDFIIITTNTM-HKVFDEIQKSI-NIPVLHIAKSTAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEI 180 + +L T T+ + + ++ I + + + C +IK++ +K + Sbjct: 119 KVGLLGTKYTMTQDFYKKILEEENISTIIPSDEDIKIVHDIIFNELCKGEIKQESKEKYL 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + +VLACT Sbjct: 179 -NIIKKLQAMGAKGVVLACT 197 >gi|171318536|ref|ZP_02907687.1| aspartate racemase [Burkholderia ambifaria MEX-5] gi|171096278|gb|EDT41185.1| aspartate racemase [Burkholderia ambifaria MEX-5] Length = 230 Score = 41.9 bits (98), Expect = 0.100, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT ++ FL A +++L Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHGAIEAAVALPFLHIADPTGAALRAAGVEHVALLG 124 Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + L + + ++ R+ + + + E Sbjct: 125 TRYTMELPFYAQRLGDKFGLDVLVPDEAARSDVHRIIYDELCHGVIDAASRATYVAIIDE 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAKRGAQAVILGCT 198 >gi|86154055|ref|ZP_01072256.1| aspartate racemase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842469|gb|EAQ59683.1| aspartate racemase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 231 Score = 41.9 bits (98), Expect = 0.100, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 4/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +IA NT + DE++ ++ L + +A Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L T T+ + + LI +S I+ + C KIK+D +K + Sbjct: 119 KIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDIIFNELCKGKIKQDSKEKYL 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + K ++LACT Sbjct: 179 -NIINKLQEKGAKGVLLACT 197 >gi|302386999|ref|YP_003822821.1| aspartate racemase [Clostridium saccharolyticum WM1] gi|302197627|gb|ADL05198.1| aspartate racemase [Clostridium saccharolyticum WM1] Length = 230 Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 17/154 (11%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+WE A+ + + L+K VI NT + ++ S+ + A Sbjct: 55 GDWEKSAVI---LSTAAKNLEKAGADFIVICTNTMHKVA-SRIQENI-SIPIIHIAEATA 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHS-----YVSQCHIHLVSSMILASRVEEYA 166 +++L T T+ + + LI++ + I ++ +I Sbjct: 110 DELKRHNITKVALLGTKYTMTQDFYKEKLINAGITVLIPDEQEIETINDVIYHELC--LG 167 Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 ++ ++ + G E+ + ++L CT Sbjct: 168 IISEVSKETYLSIVRG-LAERGAQG---VILGCT 197 >gi|228985314|ref|ZP_04145475.1| hypothetical protein bthur0001_20120 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774410|gb|EEM22815.1| hypothetical protein bthur0001_20120 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 235 Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +I NT + ++++ + L A + + +L T T Sbjct: 74 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 131 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + L + + V E I + E K + ++K Sbjct: 132 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 191 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 192 AQGI---ILGCT 200 >gi|57237092|ref|YP_178104.1| aspartate racemase, putative [Campylobacter jejuni RM1221] gi|57165896|gb|AAW34675.1| aspartate racemase, putative [Campylobacter jejuni RM1221] gi|315057525|gb|ADT71854.1| Aspartate racemase [Campylobacter jejuni subsp. jejuni S3] Length = 231 Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 4/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +IA NT + DE++ ++ L + +A Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEI 180 I +L T T+ + + ++ I + + + C +IK++ +K + Sbjct: 119 KIGLLGTKYTMTQDFYKKMLIEENISVIIPSDEDIKIVNDIIFNELCKGEIKQESKEKYL 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + K ++LACT Sbjct: 179 -NIIKKLQEKGAKGVLLACT 197 >gi|259501350|ref|ZP_05744252.1| aspartate racemase [Lactobacillus iners DSM 13335] gi|302190929|ref|ZP_07267183.1| aspartate racemase [Lactobacillus iners AB-1] gi|309803524|ref|ZP_07697617.1| aspartate racemase [Lactobacillus iners LactinV 11V1-d] gi|309805448|ref|ZP_07699495.1| aspartate racemase [Lactobacillus iners LactinV 09V1-c] gi|309810121|ref|ZP_07703967.1| aspartate racemase [Lactobacillus iners SPIN 2503V10-D] gi|312870917|ref|ZP_07731022.1| aspartate racemase [Lactobacillus iners LEAF 3008A-a] gi|312872203|ref|ZP_07732276.1| aspartate racemase [Lactobacillus iners LEAF 2062A-h1] gi|312873581|ref|ZP_07733628.1| aspartate racemase [Lactobacillus iners LEAF 2052A-d] gi|312875728|ref|ZP_07735723.1| aspartate racemase [Lactobacillus iners LEAF 2053A-b] gi|315653101|ref|ZP_07906026.1| aspartate racemase [Lactobacillus iners ATCC 55195] gi|325911635|ref|ZP_08174043.1| aspartate racemase [Lactobacillus iners UPII 143-D] gi|325912932|ref|ZP_08175306.1| aspartate racemase [Lactobacillus iners UPII 60-B] gi|329921002|ref|ZP_08277530.1| aspartate racemase [Lactobacillus iners SPIN 1401G] gi|259167203|gb|EEW51698.1| aspartate racemase [Lactobacillus iners DSM 13335] gi|308164408|gb|EFO66662.1| aspartate racemase [Lactobacillus iners LactinV 11V1-d] gi|308165266|gb|EFO67502.1| aspartate racemase [Lactobacillus iners LactinV 09V1-c] gi|308169620|gb|EFO71667.1| aspartate racemase [Lactobacillus iners SPIN 2503V10-D] gi|311088720|gb|EFQ47169.1| aspartate racemase [Lactobacillus iners LEAF 2053A-b] gi|311090834|gb|EFQ49231.1| aspartate racemase [Lactobacillus iners LEAF 2052A-d] gi|311092287|gb|EFQ50658.1| aspartate racemase [Lactobacillus iners LEAF 2062A-h1] gi|311093607|gb|EFQ51946.1| aspartate racemase [Lactobacillus iners LEAF 3008A-a] gi|315489466|gb|EFU79103.1| aspartate racemase [Lactobacillus iners ATCC 55195] gi|325476621|gb|EGC79779.1| aspartate racemase [Lactobacillus iners UPII 143-D] gi|325477746|gb|EGC80884.1| aspartate racemase [Lactobacillus iners UPII 60-B] gi|328935278|gb|EGG31758.1| aspartate racemase [Lactobacillus iners SPIN 1401G] Length = 248 Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 7/131 (5%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQS-GLISILSTPA 130 + +P V+ CNTA +EL ++ + FL AI + I +++T Sbjct: 73 AQLKPDFFVMPCNTA-HYYYNEL-ASLTDVPFLHMMRIAIHNFIDNYPNEKKIGLIATEG 130 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ ++ + Q L + + I + ++ +I +K G Sbjct: 131 SIYDHLYADELSKVGRQVEFGGPEIQPLVNELIYKNIKEKGIVDAQLFYKILQLMHDKYG 190 Query: 190 KRTDVIVLACT 200 I+L CT Sbjct: 191 CHV--ILLGCT 199 >gi|227889302|ref|ZP_04007107.1| aspartate racemase [Lactobacillus johnsonii ATCC 33200] gi|227850104|gb|EEJ60190.1| aspartate racemase [Lactobacillus johnsonii ATCC 33200] Length = 249 Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 15/134 (11%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPAT 131 K P V+ CNTA D+L + + FL + K + + I +++T + Sbjct: 74 KLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHMMRIAVHKFVDDFPKEEKIGLIATEGS 131 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-----CGIKIKEDEIKKEIEGCFIE 186 + + + + + + V E + D K ++ E Sbjct: 132 IYDHLYVDELERVGKKAE---LGGPEIQPMVNELIYHDIKEKGIVDHDLYHKILKTMHDE 188 Query: 187 KEGKRTDVIVLACT 200 +VI+L CT Sbjct: 189 Y---GCNVILLGCT 199 >gi|88799349|ref|ZP_01114927.1| putative resistance proteins [Reinekea sp. MED297] gi|88777888|gb|EAR09085.1| putative resistance proteins [Reinekea sp. MED297] Length = 233 Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 41/155 (26%), Gaps = 13/155 (8%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L VIA NT + + + + L +++L T T Sbjct: 71 LKAAGAEGLVIATNTMHKVADQITQES--QLPLLHIADCTADVIVQQGRQRVALLGTAFT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + L Y I R+ + + + + + + Sbjct: 129 MEQDFYRARLTEKYGLDVLIPEPDERADVHRIIYNELCLGKQNADSQARYVEIAQRLQSR 188 Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVD---WLDN 222 + ++L CT L V +D Sbjct: 189 GAEAVILGCT-------EITLLLTEEVTEVPLIDT 216 >gi|242238528|ref|YP_002986709.1| aspartate racemase [Dickeya dadantii Ech703] gi|242130585|gb|ACS84887.1| aspartate racemase [Dickeya dadantii Ech703] Length = 237 Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 5/138 (3%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 L VI NT + + + + + + A + I++L T Sbjct: 70 FGLKLAGAEALVICTNTMHKVAETVEQRS--GLPLIHIADATAHSIKQQNLSSIALLGTR 127 Query: 130 ATLRRTYTS-NLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T+ + + L + Q + + + + C + + ++ + E Sbjct: 128 YTMEQDFYRCRLEEKFALQVLTPDSHARNEINRIIFDELCLGRFLDSS-RQTLCQIVAEL 186 Query: 188 EGKRTDVIVLACTHYPLI 205 + + + I+L CT PL+ Sbjct: 187 QLQGAEGIILGCTELPLL 204 >gi|229155808|ref|ZP_04283911.1| hypothetical protein bcere0010_20000 [Bacillus cereus ATCC 4342] gi|228627652|gb|EEK84376.1| hypothetical protein bcere0010_20000 [Bacillus cereus ATCC 4342] Length = 237 Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +I NT + ++++ + L A + + +L T T Sbjct: 76 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 133 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + L + + V E I + E K + ++K Sbjct: 134 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 193 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 194 AQGI---ILGCT 202 >gi|169640262|gb|ACA61184.1| aspartate racemase [Campylobacter coli] gi|169640269|gb|ACA61190.1| putative aspartate racemase [Campylobacter coli] Length = 231 Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 4/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +IA NT + DE++ ++ L + +A Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L T T+ + + LI +S I+ + C KIK+D +K + Sbjct: 119 KIGLLGTKYTMTQDFYKKILIEENISVITPSDEDIKIVNDIIFNELCKGKIKQDSKEKYL 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + K ++LACT Sbjct: 179 -NIINKLQEKGAKGVLLACT 197 >gi|15966355|ref|NP_386708.1| putative hydantoin racemase protein [Sinorhizobium meliloti 1021] gi|307317487|ref|ZP_07596927.1| Asp/Glu/hydantoin racemase [Sinorhizobium meliloti AK83] gi|15075626|emb|CAC47181.1| Putative hydantoin racemase [Sinorhizobium meliloti 1021] gi|37574380|gb|AAQ93382.1| hydantoin racemase [Sinorhizobium meliloti] gi|306897076|gb|EFN27822.1| Asp/Glu/hydantoin racemase [Sinorhizobium meliloti AK83] Length = 241 Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 58/168 (34%), Gaps = 24/168 (14%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131 + VIAC R +G A Q A T S S+++T P + Sbjct: 65 EAQGVDAYVIAC--FDDPGLHAAREVAKG-PVIGICQAAVQVA-MTISRRFSVITTLPRS 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + +L+ Y ++ H V ++ L + E + KEIE I K Sbjct: 121 V--PIIEDLVSDYGAERHCRKVRAIDLPVLA--LEEDPQRAERLLLKEIE---IAKAEDG 173 Query: 192 TDVIVLAC-----THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + IVL C + ++ + V +D + + A LL Sbjct: 174 AEAIVLGCAGMSS-----LCDRLQKATG--VPVIDGVTAAVKMAEALL 214 >gi|329668010|gb|AEB93958.1| aspartate racemase [Lactobacillus johnsonii DPC 6026] Length = 249 Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 15/134 (11%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPAT 131 K P V+ CNTA D+L + + FL + K + + I +++T + Sbjct: 74 KLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHMMRIAVHKFVDDFPKEEKIGLIATEGS 131 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-----CGIKIKEDEIKKEIEGCFIE 186 + + + + + + V E + D K ++ E Sbjct: 132 IYDHLYVDELERVGKKAE---LGGPEIQPMVNELIYRDIKEKGIVDHDLYHKILKTMHDE 188 Query: 187 KEGKRTDVIVLACT 200 +VI+L CT Sbjct: 189 Y---GCNVILLGCT 199 >gi|42781317|ref|NP_978564.1| aspartate racemase family protein [Bacillus cereus ATCC 10987] gi|42737239|gb|AAS41172.1| aspartate racemase family protein [Bacillus cereus ATCC 10987] Length = 232 Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +I NT + ++++ + L A + + +L T T Sbjct: 71 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHL---VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + L + E I + E K + ++K Sbjct: 129 MEQDFYKSRIKENDIKAIVPLEKNREKIXEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 188 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 189 AQGI---ILGCT 197 >gi|85707627|ref|ZP_01038693.1| aspartate racemase [Erythrobacter sp. NAP1] gi|85689161|gb|EAQ29164.1| aspartate racemase [Erythrobacter sp. NAP1] Length = 221 Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 45/133 (33%), Gaps = 9/133 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ +IA NT L D + L + AA +++L T T Sbjct: 62 LEAGGADCLLIATNTMHKLADDV--EEASDLPLLHIADSAADAACAEGLTKMALLGTAFT 119 Query: 132 LRRTYTSNLIHSYVS-QCHIHLVSSMILASRV--EEYACGIKIK-EDEIKKEIEGCFIEK 187 + + + + + I R+ EE G + E +EI +++ Sbjct: 120 MEQDFYRERLEEHHGLDVIIPEAGDRAEVHRIIYEELIAGEVLDASRETYREIIARLVDQ 179 Query: 188 EGKRTDVIVLACT 200 + ++L CT Sbjct: 180 GAQG---VILGCT 189 >gi|58338065|ref|YP_194650.1| aspartate racemase [Lactobacillus acidophilus NCFM] gi|227902757|ref|ZP_04020562.1| aspartate racemase [Lactobacillus acidophilus ATCC 4796] gi|58255382|gb|AAV43619.1| aspartate racemase [Lactobacillus acidophilus NCFM] gi|227869420|gb|EEJ76841.1| aspartate racemase [Lactobacillus acidophilus ATCC 4796] Length = 249 Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 15/135 (11%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-----LISILS 127 DK V+ CNTA D+L + FL ++ A I +++ Sbjct: 73 DKLGTDFLVMPCNTA-HYFYDDL-AALTDKPFLHM---MRIAVHNFLDNYPDEEKIGLIA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186 T ++ ++ I + + + V E ++ + ++ Sbjct: 128 TEGSIYDHLYADEIKKVGRKVE---LGGPEIQPMVNELIYSDIKEKGTVDHDLYHKILQT 184 Query: 187 KEGK-RTDVIVLACT 200 K +VI+L CT Sbjct: 185 MHDKYGCNVILLGCT 199 >gi|239932811|ref|ZP_04689764.1| glutamate racemase [Streptomyces ghanaensis ATCC 14672] Length = 85 Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 4/61 (6%) Query: 199 CTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 CTHY L+ R V ++ ++A +A + + LSG Sbjct: 1 CTHYELVAERIRAAVQRPAGPQVALYGSAGAVAAQALRRIGERPAPGAPAGGTLTVLLSG 60 Query: 255 K 255 + Sbjct: 61 R 61 >gi|238853707|ref|ZP_04644074.1| aspartate racemase [Lactobacillus gasseri 202-4] gi|238833643|gb|EEQ25913.1| aspartate racemase [Lactobacillus gasseri 202-4] Length = 249 Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPA 130 K P V+ CNTA D+L + + FL + K + + I +++T Sbjct: 73 AKLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHMMRIAVHKFVDDFPKEEKIGLIATEG 130 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIEKEG 189 ++ + + + + + V E ++ + ++ Sbjct: 131 SIYDHLYLDELERVGKKVE---LGGPEIQPMVNELIYSDIKEKGIVDHDLYHKILKTMHD 187 Query: 190 K-RTDVIVLACT 200 K +VI+L CT Sbjct: 188 KYGCNVILLGCT 199 >gi|115352231|ref|YP_774070.1| aspartate racemase [Burkholderia ambifaria AMMD] gi|115282219|gb|ABI87736.1| aspartate racemase [Burkholderia ambifaria AMMD] Length = 230 Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 17/142 (11%), Positives = 38/142 (26%), Gaps = 19/142 (13%) Query: 68 FSDILDKYQPVLSVIACNTA--------FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 + L+ L V+ NT + FL A Sbjct: 67 AARQLEAAGADLVVLTTNTMHRVYGAIEAAVAL----------PFLHIADPTGAALRAAG 116 Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +++L T T+ + + L + + ++ R+ + + + Sbjct: 117 VERVALLGTRYTMELPFYAERLRDKFGLDVLVPDEAARGDVHRIIYDELCHGVIDAASRA 176 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 E + ++L CT Sbjct: 177 TYVAIIDELAKRGAQAVILGCT 198 >gi|326793009|ref|YP_004310830.1| aspartate racemase [Clostridium lentocellum DSM 5427] gi|326543773|gb|ADZ85632.1| aspartate racemase [Clostridium lentocellum DSM 5427] Length = 229 Score = 41.5 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 47/129 (36%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ +I NT + D++++ ++ L +++L T T Sbjct: 71 LERSGADFIIICTNTMHKVA-DQIQAKV-NIPILHIAEVTAGRLKENTIEKVALLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +++ + + + + I + + + + + + KKE E K Sbjct: 129 MQQDFYKSKLIEQGIEVLIPNEADIEVVNNTIYNELCLGSVLETSKKEFIRIIEELADKG 188 Query: 192 TDVIVLACT 200 + ++L CT Sbjct: 189 AEGVILGCT 197 >gi|312142817|ref|YP_003994263.1| aspartate racemase [Halanaerobium sp. 'sapolanicus'] gi|311903468|gb|ADQ13909.1| aspartate racemase [Halanaerobium sp. 'sapolanicus'] Length = 231 Score = 41.5 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 53/160 (33%), Gaps = 22/160 (13%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 L ++++ + + +L + C NT + + ++ L + ++ Sbjct: 58 ELLTEKMIEIALKLEKAGGDILLI--CTNTMHKMAAEV--EAAINIPLLHIADSAGESIK 113 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 +++L T T+ + + Q + L EE + E+ Sbjct: 114 EMGLNKVALLGTKFTMEEDFYKKRLKD-NYQLEV-------LIPEAEEREIIHNVIYQEL 165 Query: 177 ---------KKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 + + + + + + +VL CT PL++ Sbjct: 166 ISGIIKEQSRTKFKKIIEALKTRGAEGVVLGCTEIPLLIK 205 >gi|293608375|ref|ZP_06690678.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828948|gb|EFF87310.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 244 Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 78/222 (35%), Gaps = 49/222 (22%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACN---TAFTLIKDELRSTFPSMAFLGAVPAIKQA 114 +++ + L VIAC T + S +G A + Sbjct: 59 EEIRQ------GEFL---GVNAYVIACFGDPTLYAA------REMTSAPVIGIAEAAMRT 103 Query: 115 AAYTQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIK 172 A+Y +G S+++T T+ ++ +L H Y + V + I VEE Sbjct: 104 ASYVSNG-FSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDA 157 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSI 226 I+ E + E + D IVL C + + V +D + Sbjct: 158 YRTIRDECKKALTEDKS---DAIVLGC------AGMSDLCLKLQNELG--VIVIDGVAAA 206 Query: 227 ARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268 ++A +L ++N ++V D + P + ++ GFG Sbjct: 207 VKQAE-MLVQLNLKTSKVGD-----WASPPVKSYTGILSGFG 242 >gi|304440039|ref|ZP_07399932.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371531|gb|EFM25144.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 633 Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 3/110 (2%) Query: 92 KDELRSTFPSM--AFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCH 149 KD + + + +G + +K T++G I++ +T A+L L + Sbjct: 88 KDVMNEGYDVIKDIDIGDIVGVKGKVFKTEAGEITVRATEASLLSKSLQILPEKFHGLKD 147 Query: 150 IHLVSSMILASRVEEYAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 I L M + + IK +I K I+ E+ + +L Sbjct: 148 IELRYRMRYVDLIVNPEVKDVFIKRSKIIKAIKEYLDERGFLEVETPILG 197 >gi|169796265|ref|YP_001714058.1| hydantoin-racemase [Acinetobacter baumannii AYE] gi|213157000|ref|YP_002319045.1| Asp/Glu racemase [Acinetobacter baumannii AB0057] gi|215483720|ref|YP_002325943.1| Hydantoin racemase [Acinetobacter baumannii AB307-0294] gi|301345499|ref|ZP_07226240.1| Hydantoin racemase [Acinetobacter baumannii AB056] gi|301594989|ref|ZP_07239997.1| Hydantoin racemase [Acinetobacter baumannii AB059] gi|332855396|ref|ZP_08435852.1| hydantoin racemase [Acinetobacter baumannii 6013150] gi|332867258|ref|ZP_08437508.1| hydantoin racemase [Acinetobacter baumannii 6013113] gi|169149192|emb|CAM87072.1| hydantoin-racemase [Acinetobacter baumannii AYE] gi|213056160|gb|ACJ41062.1| Asp/Glu racemase [Acinetobacter baumannii AB0057] gi|213987924|gb|ACJ58223.1| Hydantoin racemase [Acinetobacter baumannii AB307-0294] gi|332727486|gb|EGJ58913.1| hydantoin racemase [Acinetobacter baumannii 6013150] gi|332734091|gb|EGJ65224.1| hydantoin racemase [Acinetobacter baumannii 6013113] Length = 244 Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 77/220 (35%), Gaps = 41/220 (18%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +++ ++LD VIAC R S +G A + A+Y Sbjct: 59 EEIRQ------GELLD---ADAYVIAC--FGDPALYAARE-ISSAPVIGIAEAAMRTASY 106 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEI 176 +G + + T+ ++ +L H Y + V + I VEE I Sbjct: 107 VSTGFSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELEVPDSDAYRTI 161 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRA 230 + E + E + D IVL C + + V +D + ++A Sbjct: 162 RDECKKALAEDKS---DAIVLGC------AGMSDLCLKLQNEL--EVIVIDGVAAAVKQA 210 Query: 231 RCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270 +L ++N ++V D + P ++ GFG++ Sbjct: 211 E-MLVQLNLKTSKVGD-----WASPPVKNYTGILSGFGVR 244 >gi|307307825|ref|ZP_07587554.1| Asp/Glu/hydantoin racemase [Sinorhizobium meliloti BL225C] gi|306901691|gb|EFN32293.1| Asp/Glu/hydantoin racemase [Sinorhizobium meliloti BL225C] Length = 241 Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 57/168 (33%), Gaps = 24/168 (14%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131 + VIAC R +G A Q A T S S+++T P + Sbjct: 65 EAQGVDAYVIAC--FDDPGLHAAREVAKG-PVIGICQAAVQVA-MTISRRFSVITTLPRS 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + +L+ Y ++ H V ++ L + E + KEIE I Sbjct: 121 V--PIIEDLVSDYGAERHCRKVRAIDLPVLA--LEEDPQRAERLLLKEIE---IAMAEDG 173 Query: 192 TDVIVLAC-----THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 + IVL C + ++ + V +D + + A LL Sbjct: 174 AEAIVLGCAGMSS-----LCDRLQKATG--VPVIDGVTAAVKMAEALL 214 >gi|282163103|ref|YP_003355488.1| aspartate racemase [Methanocella paludicola SANAE] gi|282155417|dbj|BAI60505.1| aspartate racemase [Methanocella paludicola SANAE] Length = 233 Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 3/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 +M + L +I NT ++ D+++ + L A + Sbjct: 63 IMADMARGLKWAGADFILICTNTM-HIMADDVQRRA-GIDVLHIADATGLEIRRAGLKKV 120 Query: 124 SILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T+ + YT L + + I + + + E K ++ Sbjct: 121 GLLGTRFTMEKDFYTGRLKDGFGIEAIIPEEAERQEVHDIIFKELCAGVIRPESKARLKE 180 Query: 183 CFIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 181 IIAGLSSRGAEGIILGCT 198 >gi|260495458|ref|ZP_05815584.1| aspartate racemase [Fusobacterium sp. 3_1_33] gi|260196995|gb|EEW94516.1| aspartate racemase [Fusobacterium sp. 3_1_33] Length = 231 Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 41/129 (31%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K VI NT ++ + + L I +L T T Sbjct: 71 LEKAGADFIVICTNTMHKVVSGI--KKYTKLPILHIAEMTAIELKKAGIKKIGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +++ + ++ + I + + + V + + E K+E E Sbjct: 129 MQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIFNELCLGEIKKESKEEYLRIIKELSKAG 188 Query: 192 TDVIVLACT 200 ++L CT Sbjct: 189 AKGVILGCT 197 >gi|288573175|ref|ZP_06391532.1| aspartate racemase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568916|gb|EFC90473.1| aspartate racemase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 234 Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 29/92 (31%), Gaps = 7/92 (7%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G + L+ L L L + CNTA D R ++ Sbjct: 63 GRSPEADLRDGLETLIDW-----GADLLAVPCNTA-HFFIDGFREELSVPFIHIVESTLE 116 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144 A A + SG +LST TL+ H Sbjct: 117 LAVANSPSGA-WLLSTEGTLKSGLYQKEAHKI 147 >gi|209550089|ref|YP_002282006.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535845|gb|ACI55780.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 239 Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 57/181 (31%), Gaps = 18/181 (9%) Query: 24 GGLIVLQKMRFLMPEYHFIYV---ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 GGL + + + + + D G +RL + + + + Sbjct: 31 GGLASAELILHSVNFEEIVALQKAGDWAGA----------ARRLGEVAARLEAAGAGCIL 80 Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 + C NT LI DE+ + S + + ++ +L+T T+ + ++ Sbjct: 81 I--CTNTM-HLIADEVAAKI-SAPLIHIIDETAKSLHAAGRKRPLLLATRYTMEHGFYTD 136 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + S + + + D ++++ D I+L C Sbjct: 137 RMKSLGLDIMVPDAADRTSVHDIIFNELCAGRVHDSSREKLIDIIDRAAEHGADSIILGC 196 Query: 200 T 200 T Sbjct: 197 T 197 >gi|17544931|ref|NP_518333.1| aspartate racemase [Ralstonia solanacearum GMI1000] gi|17427221|emb|CAD13740.1| putative aspartate racemase protein [Ralstonia solanacearum GMI1000] Length = 229 Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 8/154 (5%) Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114 + L + ++ L ++ + NT ++ D +R P + + A+ A Sbjct: 55 KQFDQLAEYVLGALRS-LAAGGADIAALTGNTPN-IVMDRVRPMSP-IPVVSAIEATCAE 111 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR---VEEYACGIKI 171 A + +L T T+ T+ + + + +A +E + Sbjct: 112 AQRRGVRRVGLLGTVFTMTNTFFK--VPFEDRSIQVVVPDDAQIAQIQHKIESELEHGIV 169 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205 ++ I + + D + LACT PLI Sbjct: 170 TDETRDAFIAIIKDLQTREGIDQVALACTELPLI 203 >gi|121612261|ref|YP_999809.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|167004784|ref|ZP_02270542.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|87249036|gb|EAQ71998.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni 81-176] Length = 231 Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 4/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +IA NT + +E++ ++ L + +A Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFNEIQQNI-NIPILHIAKSSAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L T T+ + + LI +S I+ + C KIK+D +K + Sbjct: 119 KIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDIIFNELCKGKIKQDSKEKYL 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + K ++LACT Sbjct: 179 -NIIKKLQEKGAKGVLLACT 197 >gi|268320123|ref|YP_003293779.1| hypothetical protein FI9785_1659 [Lactobacillus johnsonii FI9785] gi|262398498|emb|CAX67512.1| racD [Lactobacillus johnsonii FI9785] Length = 249 Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 15/134 (11%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPAT 131 K P V+ CNTA D+L + + FL + K + + I +++T + Sbjct: 74 KLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHMMRIAVHKFVDDFPKEEKIGLIATEGS 131 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-----CGIKIKEDEIKKEIEGCFIE 186 + + + + + + V E + D K ++ E Sbjct: 132 IYDHLYVDELERVGKKAE---LGGPKIQPMVNELIYRDIKEKGIVDHDLYHKILKTMHDE 188 Query: 187 KEGKRTDVIVLACT 200 +VI+L CT Sbjct: 189 Y---GCNVILLGCT 199 >gi|160946444|ref|ZP_02093653.1| hypothetical protein PEPMIC_00404 [Parvimonas micra ATCC 33270] gi|158447560|gb|EDP24555.1| hypothetical protein PEPMIC_00404 [Parvimonas micra ATCC 33270] Length = 231 Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 6/101 (5%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 N + L + L +IL++ + I CNT DE ++ F ++ + + Sbjct: 55 NKDTEFLNEIKKDL--EILERIGIDVVAIPCNT-SHYFYDEFKN-FTNLKIINMIEETIL 110 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154 +++ T TL + + + +S Sbjct: 111 EIKRRGIKKVAVFGTLGTLNSKVYNKYAKE--NGIEVKELS 149 >gi|157371646|ref|YP_001479635.1| aspartate racemase [Serratia proteamaculans 568] gi|157323410|gb|ABV42507.1| aspartate racemase [Serratia proteamaculans 568] Length = 230 Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 38/125 (30%), Gaps = 7/125 (5%) Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 VI NT + + + + A + +L T T+ + + Sbjct: 78 AIVICTNTMHKVA--DAVEQASGLPLIHIADATALQVRQQDIRRVGLLGTRFTMEQEFYR 135 Query: 139 NLIHSYVSQCHIHLVSS-MILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 + + V++ + R+ EE G D + E + E + I Sbjct: 136 GRLQKKYGIEVVTPVAADRDIVHRIIYEELCLGKI--RDASRDEYRRIIGDLEQQGAQGI 193 Query: 196 VLACT 200 + CT Sbjct: 194 IFGCT 198 >gi|13473462|ref|NP_105029.1| aspartate racemase [Mesorhizobium loti MAFF303099] gi|14024211|dbj|BAB50815.1| aspartate racemase [Mesorhizobium loti MAFF303099] Length = 231 Score = 41.5 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 4/139 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 L+ + L+ V+ NT + T S+ + A A Sbjct: 63 LLIEAARKLEAGGAEGLVLCTNTM--HRLADQVQTSVSIPLIHIADATAMAVKRAGMQRP 120 Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKEIE 181 ++L+T T+ + + L Y + + + + RV + C + E +E Sbjct: 121 ALLATRFTMEQDFYKGRLADKYGLRPVVPDAAGRDMVHRVIYDELCQGIVSEASKAAYME 180 Query: 182 GCFIEKEGKRTDVIVLACT 200 + + D I++ CT Sbjct: 181 EAERLRREEAADSIIMGCT 199 >gi|298368550|ref|ZP_06979868.1| aspartate racemase [Neisseria sp. oral taxon 014 str. F0314] gi|298282553|gb|EFI24040.1| aspartate racemase [Neisseria sp. oral taxon 014 str. F0314] Length = 230 Score = 41.5 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 18/145 (12%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+ ++A NT + ++ + L V A A + Sbjct: 63 VLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAA--GIPLLHVVDATAAAIKRQGLSAV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE----IKKE 179 +L T T+ + + + S + ++ + E+ I ++ I+ E Sbjct: 121 GLLGTRFTMSDGFYTERMGSQG----VQTIA----PTAAEQDEIHRIIFDELCLNRIRPE 172 Query: 180 IEGCFIE----KEGKRTDVIVLACT 200 F + + + ++L CT Sbjct: 173 SARYFYDVIGRLKNEGAQGVILGCT 197 >gi|306479819|emb|CBV36062.1| glutamate racemase [Helicobacter pylori] Length = 75 Score = 41.5 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 20/75 (26%), Gaps = 8/75 (10%) Query: 199 CTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 CTH+PLI H + + D+I + F Sbjct: 1 CTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPKVEFHA 58 Query: 253 SGKPDIAMRRLMQGF 267 SG ++ + Sbjct: 59 SGDVVWLEKQAKEWL 73 >gi|311281614|ref|YP_003943845.1| aspartate racemase [Enterobacter cloacae SCF1] gi|308750809|gb|ADO50561.1| aspartate racemase [Enterobacter cloacae SCF1] Length = 244 Score = 41.5 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 17/173 (9%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + +L+ VI CNTA ++L++ + + + A A S Sbjct: 62 HSLEQYLHMLEAAGAECIVIPCNTA-HYWFEDLQA-VAKVEMISILDATLNAIPDGVS-C 118 Query: 123 ISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181 + +L+T ATL R Y ++ + + G K + + + Sbjct: 119 VGLLATDATLAARLYQDKAAARGMTLIQPEREEQAQVMQAIYALKRGDKTAAEAL---LL 175 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230 + + I++ CT PLI ++ ++D++ S+ R A Sbjct: 176 PQIRQLAARGAQAIIMGCTEIPLI------VAGHEDAFSCRFVDSTASLVRAA 222 >gi|222095821|ref|YP_002529878.1| aspartate racemase [Bacillus cereus Q1] gi|221239879|gb|ACM12589.1| aspartate racemase [Bacillus cereus Q1] Length = 232 Score = 41.1 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +I NT ++ ++++ + L A + + +L T T Sbjct: 71 LQMGGADFIIICTNTMHKVV-EKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + L + + V E I + E K + ++K Sbjct: 129 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 188 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 189 AQGI---ILGCT 197 >gi|229827427|ref|ZP_04453496.1| hypothetical protein GCWU000182_02816 [Abiotrophia defectiva ATCC 49176] gi|229788365|gb|EEP24479.1| hypothetical protein GCWU000182_02816 [Abiotrophia defectiva ATCC 49176] Length = 230 Score = 41.1 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 26/96 (27%), Gaps = 4/96 (4%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 N + L+ IL+ I CNT DE R + + + Sbjct: 55 NRKTEFLEAIKKDFA--ILENIGVEAVAIPCNT-SHYFYDEFR-KLTDLKIINMIEETIL 110 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCH 149 + ISI T TL Y + Sbjct: 111 EVKKSGVKKISIFGTLGTLNSKVYERYAKEYGLEVK 146 >gi|152994507|ref|YP_001339342.1| Asp/Glu racemase [Marinomonas sp. MWYL1] gi|150835431|gb|ABR69407.1| Asp/Glu racemase [Marinomonas sp. MWYL1] Length = 243 Score = 41.1 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 44/153 (28%), Gaps = 17/153 (11%) Query: 53 GNWE-----DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA 107 G D + + + + +IAC D R +G Sbjct: 40 GPKSIECAFDEVIASAALLDLIEQGKQQGVDAHIIAC--FGDPALDAARE-LADAPVIGI 96 Query: 108 VPAIKQAAAYTQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166 A Q A+ +++T TL + +L+ Y Q V + + Sbjct: 97 AEAGFQMASLIAH-RFGVVTTLSRTL--PASEHLLQKYGHQHKCSGVRATDIPVLA---L 150 Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 I ++ K C E + IVL C Sbjct: 151 ENIDPAAYQLLKT--ECLAAIEEDGAEAIVLGC 181 >gi|254975847|ref|ZP_05272319.1| putative amino acid recemase [Clostridium difficile QCD-66c26] gi|255093234|ref|ZP_05322712.1| putative amino acid recemase [Clostridium difficile CIP 107932] gi|255314976|ref|ZP_05356559.1| putative amino acid recemase [Clostridium difficile QCD-76w55] gi|255517651|ref|ZP_05385327.1| putative amino acid recemase [Clostridium difficile QCD-97b34] gi|255650761|ref|ZP_05397663.1| putative amino acid recemase [Clostridium difficile QCD-37x79] gi|260683847|ref|YP_003215132.1| putative amino acid recemase [Clostridium difficile CD196] gi|260687507|ref|YP_003218641.1| putative amino acid recemase [Clostridium difficile R20291] gi|306520672|ref|ZP_07407019.1| aspartate racemase [Clostridium difficile QCD-32g58] gi|260210010|emb|CBA64048.1| putative amino acid recemase [Clostridium difficile CD196] gi|260213524|emb|CBE05253.1| putative amino acid recemase [Clostridium difficile R20291] Length = 228 Score = 41.1 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + VI NT + D+++ + + L + +++L T T Sbjct: 71 LQEAGADFIVICTNTM-HKVSDKIQESI-HIPLLHIADVTATVLREKEIKKVALLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + N+I + + I I+ + + I + KK + + Sbjct: 129 MEQDFYKNVIINNGIEVLIPNEEDRIIVNDTIFNELCLGIISESSKKAFLSIIDKLGKQG 188 Query: 192 TDVIVLACT 200 + ++L CT Sbjct: 189 AEGVILGCT 197 >gi|329119082|ref|ZP_08247774.1| aspartate racemase [Neisseria bacilliformis ATCC BAA-1200] gi|327464821|gb|EGF11114.1| aspartate racemase [Neisseria bacilliformis ATCC BAA-1200] Length = 229 Score = 41.1 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ L ++A NT + + L V A A + +L T T Sbjct: 71 LETAGADLLLLATNTMHKVAPAI--EAAVKIPLLHIVDATAAAIKKQGLSAVGLLGTRFT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + + Q + R+ + + E + + + Sbjct: 129 MSDGFYTERMAAQGVQTIVPDDEEQDEIHRIIFEELCLNQIKPESAAYFQHVIVRLKDAG 188 Query: 192 TDVIVLACT 200 ++L CT Sbjct: 189 AQGVILGCT 197 >gi|255321352|ref|ZP_05362512.1| aspartate racemase [Campylobacter showae RM3277] gi|255301505|gb|EET80762.1| aspartate racemase [Campylobacter showae RM3277] Length = 227 Score = 41.1 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 24/70 (34%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L IACNTA K ++ + + + + + I++++T T Sbjct: 70 LKNAGCEAICIACNTAHYFAKRLTDECGVNILHIAKIATASIKSNFPHAKKIAVIATTGT 129 Query: 132 LRRTYTSNLI 141 N + Sbjct: 130 TAAKIYENEL 139 >gi|242398551|ref|YP_002993975.1| hydantoin racemase [Thermococcus sibiricus MM 739] gi|242264944|gb|ACS89626.1| hydantoin racemase [Thermococcus sibiricus MM 739] Length = 224 Score = 41.1 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 43/184 (23%) Query: 52 YGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI 111 Y + K +++ L + + +I+C A +E R S+ +GA + Sbjct: 49 YDEKTEEEAKPKILRLAKEF-ENEGVDAIIISC--AADPAVEEAR-KLVSVPVIGAGSSA 104 Query: 112 KQAAAYTQSGLISIL----STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167 A I +L TP ++ LI E++ Sbjct: 105 SALALAYA-RKIGVLNLTEETPRVIKEVLGDKLI--------------------AEDHPE 143 Query: 168 GIKIKEDEI----KKEIEGCFIEKEGKRTDVIVLACT-----HYPLIVHVFRQLSPWPVD 218 G+ D + +KE + K + IVL CT +I + + PV Sbjct: 144 GVSNTLDLMTDWGRKEAINAARRLKEKGVEAIVLGCTGMSTI---MIAPILEKEVGIPV- 199 Query: 219 WLDN 222 +D Sbjct: 200 -IDP 202 >gi|167577770|ref|ZP_02370644.1| aspartate racemase [Burkholderia thailandensis TXDOH] Length = 226 Score = 41.1 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 38/155 (24%), Gaps = 14/155 (9%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + V+ NT + S+ F+ V +A +L T T+ Sbjct: 68 EAGGADFVVLCTNTMHKVAPAI--EAALSVPFVHIVDPTARALRRAGVRRAGLLGTRFTM 125 Query: 133 RRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + S + + V + D + E Sbjct: 126 EAAFYRERMASRHGIDVIVPDERDRAVIHDVIYDELCHGVVRDASRDAYRRIIESLEAAG 185 Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 ++L CT L D++ + Sbjct: 186 AQGVILGCT-------EIALLIGPE----DSALPV 209 >gi|225442873|ref|XP_002281753.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 305 Score = 41.1 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 59/175 (33%), Gaps = 28/175 (16%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--------L 122 L++ V+ C+ + + S S+ FL + + + Sbjct: 131 FLERSGVQCIVMPCH--ISHSWHDEISRGSSVPFLHMGECVARELKNAKLKPLEAGSPLR 188 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYAC-GIKIKEDEIKKE 179 I +L+T ATL + + + + ++M + +E + ++ + ++ Sbjct: 189 IGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEAFNRKDMEGARNLLRIA 248 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230 ++ + + + ++LA L P +D D++AR Sbjct: 249 LQVLLV----RAVNTVILA-------SDDMHDLLPRDDPLLKKCVDPMDALARST 292 >gi|302339718|ref|YP_003804924.1| Asp/Glu/hydantoin racemase [Spirochaeta smaragdinae DSM 11293] gi|301636903|gb|ADK82330.1| Asp/Glu/hydantoin racemase [Spirochaeta smaragdinae DSM 11293] Length = 272 Score = 41.1 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 24/163 (14%) Query: 84 CNT--------AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPATLRR 134 CNT AFT ++L +++ G + ILST T Sbjct: 102 CNTFHAPLVWNAFTKQLEQL--HAAVKPVHMLDQTVEELRQRFAPGAHVGILSTIGTKES 159 Query: 135 TYTSNLIHS--YVSQCHIHLVSSMILASRVEEYACGIKIKEDE---IKKEIEGCFIEKEG 189 N I ++ + + + + +++ G+K K K ++ Sbjct: 160 GVWRNAIQEAGFIP-LETDQMWTEKVHGAIYDHSWGLKAKSPASGKAKAMLQEATEYLIN 218 Query: 190 KRTDVIVLACTHYPL-IVH-VFRQLSPWPVDWLDNSDSIARRA 230 K D I+L CT PL + FR + +D S+AR Sbjct: 219 KGADAIILGCTEIPLALREGPFRNVM-----LVDPVSSLARAL 256 >gi|124265378|ref|YP_001019382.1| hypothetical protein Mpe_A0185 [Methylibium petroleiphilum PM1] gi|124258153|gb|ABM93147.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 238 Score = 41.1 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 5/123 (4%) Query: 80 SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 +IA NT + ++ + L AI A I +L T T+ + + + Sbjct: 79 LLIASNTM-HRVAPTVQQAC-GLPLLHIGDAIGAALRAAGLTRIGLLGTRFTMEQDFLRD 136 Query: 140 -LIHSYVSQCHIHLVSSMI-LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 L + + + + L + + C + D ++ +VL Sbjct: 137 HLRQRHGVEMRVPGEADRATLQQLIFDELCRGIV-RDASRQATLTIVDRMAADGAQGVVL 195 Query: 198 ACT 200 CT Sbjct: 196 GCT 198 >gi|56709079|ref|YP_165124.1| hydantoin racemase [Ruegeria pomeroyi DSS-3] gi|56680764|gb|AAV97429.1| hydantoin racemase [Ruegeria pomeroyi DSS-3] Length = 227 Score = 41.1 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 10/133 (7%) Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 L ++ VIAC D +R T S+ LG A AA+ + S++ Sbjct: 57 LLEEVARHKDVDAIVIAC--FDDTGLDAVR-TLVSVPVLGIGEAAYHAASMIANK-FSVI 112 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T + +NL+ ++Q + ++ I ++EE G +I+ EI + Sbjct: 113 TTLSRSVPGLENNLMRYGLAQKCARVRATDIPVLKLEE---GDPATLSKIRSEISASIAQ 169 Query: 187 KEGKRTDVIVLAC 199 T+ IVL C Sbjct: 170 ---DNTEAIVLGC 179 >gi|159186284|ref|NP_355961.2| hydantoin racemase [Agrobacterium tumefaciens str. C58] gi|38016569|gb|AAR07618.1| hydantoin racemase 1 [Agrobacterium tumefaciens str. C58] gi|159141418|gb|AAK88746.2| hydantoin racemase [Agrobacterium tumefaciens str. C58] Length = 240 Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 12/128 (9%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131 + + VIAC R +G A Q A T S SI++T P + Sbjct: 65 EGHGVDAYVIAC--FDDPGLHAAREVARG-PVIGICQAAVQVA-MTISRRFSIITTLPRS 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + +L+ Y +Q + V ++ L ++ E +++EIE K Sbjct: 121 I--PIIEDLVEDYGAQRYCRKVRAIDLPVL--GLEEDPEVAEALLRREIEAA---KREDA 173 Query: 192 TDVIVLAC 199 + I+L C Sbjct: 174 AEAIILGC 181 >gi|50085353|ref|YP_046863.1| hydantoin-racemase [Acinetobacter sp. ADP1] gi|49531329|emb|CAG69041.1| hydantoin-racemase [Acinetobacter sp. ADP1] Length = 232 Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 38/127 (29%), Gaps = 10/127 (7%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 + Q +IAC R +G A A + + T + Sbjct: 65 RENQVDGHIIAC--FGDPALHAARE-IADAPVIGIAEAAFHVATLVATK--FSIVTTLSR 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R +L+H Y + + L E E+ +K +E C K+ Sbjct: 120 TRIIAEHLLHEYGFVHKCSNIHCIDLPVL--ELESN---TEETYQKLLEHCLKAKQQDNI 174 Query: 193 DVIVLAC 199 IVL C Sbjct: 175 GAIVLGC 181 >gi|295688081|ref|YP_003591774.1| aspartate racemase [Caulobacter segnis ATCC 21756] gi|295429984|gb|ADG09156.1| aspartate racemase [Caulobacter segnis ATCC 21756] Length = 236 Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 42/147 (28%), Gaps = 19/147 (12%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 R + + L+ V+ NT + E + L +A Sbjct: 65 RRLADAARALEAGGADFLVLCTNTM--HREAETIEAAVRIPLLHIADPTGEAIKAAGLST 122 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI------ 176 + +L T T+ + + +L E+ A +I +E+ Sbjct: 123 VGLLGTAFTMEHDFYRGRLE--------TQHGLTVLTPEAEDRAAVHRIIYEELVAGRVL 174 Query: 177 ---KKEIEGCFIEKEGKRTDVIVLACT 200 ++ + + I+L CT Sbjct: 175 DASREVYRAVIERLVARGAEAIILGCT 201 >gi|193077759|gb|ABO12629.2| Aspartate racemase [Acinetobacter baumannii ATCC 17978] Length = 242 Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 L ++ + V C NT + ++ F+ A + Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179 +++L T T+ + + + + I ++ + S + + C I D K Sbjct: 118 RKVALLGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSIIYDELCLGLINPDSQNKY 177 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 E G+ + I+L CT Sbjct: 178 -MTIVEELIGQGAEGIILGCT 197 >gi|239625205|ref|ZP_04668236.1| aspartate racemase [Clostridiales bacterium 1_7_47_FAA] gi|239519435|gb|EEQ59301.1| aspartate racemase [Clostridiales bacterium 1_7_47FAA] Length = 234 Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+K VI NT + ++ S+ L + + Sbjct: 63 ILGQAARSLEKAGADFIVICTNTMHKVAPRI--QSYISIPLLHIADVTTECLKDRGIKTV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++L T T+ + + + Q I + +RV + E + Sbjct: 121 ALLGTRYTMEQDFYKERLVQSGLQVLIPEEPQREMINRVIFDELCLGTISPESRAGFLAI 180 Query: 184 FIEKEGKRTDVIVLACT 200 K + ++L CT Sbjct: 181 IRGLGQKGAEGVILGCT 197 >gi|42519759|ref|NP_965689.1| aspartate racemase [Lactobacillus johnsonii NCC 533] gi|41584049|gb|AAS09655.1| aspartate racemase [Lactobacillus johnsonii NCC 533] Length = 249 Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 15/134 (11%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPAT 131 K P V+ CNTA D+L + + FL + K + + I +++T + Sbjct: 74 KLNPDFFVMPCNTA-HYFYDDL-AALTGVPFLHMMRIAVHKFVDDFPKEEKIGLIATEGS 131 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-----CGIKIKEDEIKKEIEGCFIE 186 + + + + + + V E + D K ++ E Sbjct: 132 IYDHLYVDELERVGKKAE---LGGPEIQPMVNELIYRDIKEKGIVDHDLYHKILKTMHDE 188 Query: 187 KEGKRTDVIVLACT 200 +VI+L CT Sbjct: 189 Y---GCNVILLGCT 199 >gi|299529910|ref|ZP_07043338.1| aspartate racemase [Comamonas testosteroni S44] gi|298722082|gb|EFI63011.1| aspartate racemase [Comamonas testosteroni S44] Length = 265 Score = 41.1 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 5/103 (4%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159 S+ FL + AA ++ +L T T+ + + L + + + + Sbjct: 132 SIPFLHIADPVGAAARAAGVQVLGLLGTRFTMEQPFMRERLEQQFGLKVLVPGEAERAQV 191 Query: 160 SRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 R+ EE G D +K + + +VL CT Sbjct: 192 HRIIYEELCAGQI--SDVSRKLYQRAIESLAARGAQAVVLGCT 232 >gi|123441625|ref|YP_001005610.1| putative aspartate/glutamate racemase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088586|emb|CAL11381.1| putative aspartate/glutamate racemase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 232 Score = 41.1 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 3/130 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + + V+ NT + D T + L A I +L T T Sbjct: 72 LKRAGAEVVVVCTNTMHKVADDI--ETASGLPLLHIADATAAQIKQQGINKIGLLGTRYT 129 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + L + + + +R+ + I + ++E E + Sbjct: 130 MEQEFYRGRLTEKHDIDVITPNSADREIINRIIYEELCLGITRETSRQEYRRIIGHLEEQ 189 Query: 191 RTDVIVLACT 200 I+ CT Sbjct: 190 GAQGIIFGCT 199 >gi|294010916|ref|YP_003544376.1| putative aspartate/glutamate racemase [Sphingobium japonicum UT26S] gi|292674246|dbj|BAI95764.1| putative aspartate/glutamate racemase [Sphingobium japonicum UT26S] Length = 231 Score = 40.7 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 35/136 (25%), Gaps = 7/136 (5%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L +I NT + D + L + + +L Sbjct: 67 AARRLEAGGADLLLICTNTMHRMATDV--QAAVDVPLLHIADPTAERIKAAGFSKVGLLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCF 184 T T+ + L + I R+ EE G + + Sbjct: 125 TAFTMEHAFYKGRLADQHGLSVIIPNDEDRATVHRIIYEELVAGKVLPTS--RDAYRAII 182 Query: 185 IEKEGKRTDVIVLACT 200 ++L CT Sbjct: 183 ARLVEDGAQAVILGCT 198 >gi|225389968|ref|ZP_03759692.1| hypothetical protein CLOSTASPAR_03718 [Clostridium asparagiforme DSM 15981] gi|225043983|gb|EEG54229.1| hypothetical protein CLOSTASPAR_03718 [Clostridium asparagiforme DSM 15981] Length = 126 Score = 40.7 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 36/92 (39%) Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168 A QA + + +L T T+++ + + + I M + +R+ Sbjct: 2 EATAQALIDSGITRVLLLGTRYTMQQDFYKEKLVERGIEVMIPGDEDMEIVNRIIFGELC 61 Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + + E K++ E++ + ++L CT Sbjct: 62 LGVISQESKRQYLRIIEEQKERGAQGVILGCT 93 >gi|159186021|ref|NP_356564.2| aspartate racemase [Agrobacterium tumefaciens str. C58] gi|159141155|gb|AAK89349.2| aspartate racemase [Agrobacterium tumefaciens str. C58] Length = 237 Score = 40.7 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 35/121 (28%), Gaps = 3/121 (2%) Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V+ C NT + + +A + + A +L+T T+ + ++ Sbjct: 79 VLICTNTM--HLVADTVEKMSGVALIDIIDETAAALKADGRRKPLLLATRYTMEHGFYTD 136 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + + + + + ++ + D ++L C Sbjct: 137 RMRQHGVDVVVPEADDRAAIHDIIFGELCQGEIKSCSRERYLAVIEKARALGVDSVILGC 196 Query: 200 T 200 T Sbjct: 197 T 197 >gi|239834689|ref|ZP_04683017.1| Hydantoin racemase [Ochrobactrum intermedium LMG 3301] gi|239822752|gb|EEQ94321.1| Hydantoin racemase [Ochrobactrum intermedium LMG 3301] Length = 244 Score = 40.7 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 43/128 (33%), Gaps = 12/128 (9%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131 + VIAC R +G A Q A T S S+++T P + Sbjct: 65 EALGVDAYVIAC--FDDPGLHAAREVAKG-PVIGICQAAVQVA-MTISRRFSVITTLPRS 120 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + +L+ Y + H V ++ L E + KEIE E Sbjct: 121 V--AIIEDLVSEYGADRHCRKVRAIDLPVLA--LEDDSYKAEQLLLKEIERAKAE---DG 173 Query: 192 TDVIVLAC 199 + IVL C Sbjct: 174 AEAIVLGC 181 >gi|15674208|ref|NP_268383.1| aspartate racemase [Lactococcus lactis subsp. lactis Il1403] gi|281492904|ref|YP_003354884.1| aspartate racemase [Lactococcus lactis subsp. lactis KF147] gi|12725293|gb|AAK06324.1|AE006451_5 aspartate racemase [Lactococcus lactis subsp. lactis Il1403] gi|281376556|gb|ADA66042.1| Aspartate racemase [Lactococcus lactis subsp. lactis KF147] gi|326407815|gb|ADZ64886.1| aspartate racemase [Lactococcus lactis subsp. lactis CV56] Length = 240 Score = 40.7 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 17/135 (12%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPA 130 + P V+ CNTA DE++ + L P I + ++ +++L+T Sbjct: 74 QLSPKFFVVPCNTA-HYYFDEMQKA-TEIPILHM-PRIAVDSISHHFPKAKRVAVLATEG 130 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRV-----EEYACGIKIKEDEIKKEIEGCFI 185 T+ + + ++ L +V +E + + K+ + Sbjct: 131 TILTGVYRKALEEQGYEA---VIPDDQLQEKVNRLIYQEVKENRNLNFELYKEILSDVAS 187 Query: 186 EKEGKRTDVIVLACT 200 E +V +L CT Sbjct: 188 EM---NCEVTILGCT 199 >gi|116630286|ref|YP_815505.1| aspartate racemase [Lactobacillus gasseri ATCC 33323] gi|282852924|ref|ZP_06262265.1| aspartate racemase [Lactobacillus gasseri 224-1] gi|116095868|gb|ABJ61020.1| Aspartate racemase [Lactobacillus gasseri ATCC 33323] gi|282556032|gb|EFB61653.1| aspartate racemase [Lactobacillus gasseri 224-1] Length = 249 Score = 40.7 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 15/135 (11%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127 K P V+ CNTA D+L + + FL ++ A + + I +++ Sbjct: 73 AKLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHM---MRIAVHTFVDNFPKEEKIGLIA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186 T ++ + + + + + V E ++ + ++ Sbjct: 128 TEGSIYDHLYVDELERVGKKVE---LGGPEIQPMVNELIYSDIKEKGIVDHDLYHKILKT 184 Query: 187 KEGK-RTDVIVLACT 200 K +VI+L CT Sbjct: 185 MHDKYGCNVILLGCT 199 >gi|325123649|gb|ADY83172.1| putative aspartate racemase [Acinetobacter calcoaceticus PHEA-2] Length = 236 Score = 40.7 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 75/220 (34%), Gaps = 40/220 (18%) Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 + +I I +GG+ + + K+ P + D P + R Sbjct: 1 MNKAIGI----LGGMGPQATIDAMNKIIRNTPAH-----CDQEHIPVVTVSIPDIPDRTQ 51 Query: 66 FLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 + + IL+ Q +I CNTA ++L+ + A+ Sbjct: 52 AIINQDNKPLEKMAEYLKILEAAQVGCIIIPCNTA-HFWFNQLQKRTQTKMISIVESAV- 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE----EYACG 168 +Q + IL+T AT+ ++ S + ++V +Y G Sbjct: 110 HFIQDSQIDEVCILATSATINTELYQ---SQFIENSIGFSTPSAEMQNKVMQSIYQYKAG 166 Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208 + E+ KE+ + K + +LACT PLI+ Sbjct: 167 NIQQAREMMKEVINFYTNKRNIKF---LLACTEIPLILEE 203 >gi|217959736|ref|YP_002338288.1| aspartate racemase family protein [Bacillus cereus AH187] gi|229138929|ref|ZP_04267508.1| Aspartate racemase [Bacillus cereus BDRD-ST26] gi|217064172|gb|ACJ78422.1| aspartate racemase family protein [Bacillus cereus AH187] gi|228644554|gb|EEL00807.1| Aspartate racemase [Bacillus cereus BDRD-ST26] Length = 234 Score = 40.7 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +I NT + ++++ + L A + + +L T T Sbjct: 73 LQMGGADFIIICTNTM-HKVIEKIKKNI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 130 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + L + + V E I + E K + ++K Sbjct: 131 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 190 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 191 AQGI---ILGCT 199 >gi|325918984|ref|ZP_08181049.1| aspartate racemase [Xanthomonas vesicatoria ATCC 35937] gi|325534789|gb|EGD06720.1| aspartate racemase [Xanthomonas vesicatoria ATCC 35937] Length = 136 Score = 40.7 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 27/78 (34%) Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 + +L T T+ + + + + + + + RV + +D + Sbjct: 26 VGLLGTRFTMEQPFYRQRLEARGLTVVVPPAGARMELHRVIYEELCQGVIDDGSRTYFRQ 85 Query: 183 CFIEKEGKRTDVIVLACT 200 E + + IVL CT Sbjct: 86 VMAELDRQGAQAIVLGCT 103 >gi|251797250|ref|YP_003011981.1| aspartate racemase [Paenibacillus sp. JDR-2] gi|247544876|gb|ACT01895.1| aspartate racemase [Paenibacillus sp. JDR-2] Length = 240 Score = 40.7 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 15/137 (10%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG-LISILST 128 +L I CNTA +E++ ++ + V +K A SG + IL+T Sbjct: 72 LLHDAGVSNIAIPCNTA-HCFYNEMQEM-TTIPIINMVNETLKLVADKFGSGSKVGILAT 129 Query: 129 PATLRRTYTSNL-----IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 TL S + Y I I++ ++ + EI++ IE Sbjct: 130 DGTLHNGIYSEECENLKLKLYKPNEEIQK---RIMSIIYKKLKKNQHVNPAEIEEIIEKL 186 Query: 184 FIEKEGKRTDVIVLACT 200 + D V+ACT Sbjct: 187 LSDF---GCDCAVIACT 200 >gi|89901877|ref|YP_524348.1| aspartate racemase [Rhodoferax ferrireducens T118] gi|89346614|gb|ABD70817.1| Aspartate racemase [Rhodoferax ferrireducens T118] Length = 259 Score = 40.7 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ +ACNTA DEL++ P + L + + + +L+T T Sbjct: 97 LETVGVCAVAMACNTAHAW-HDELQARIPLIELLHMPREVVAYLRALRLREVGLLATQGT 155 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 R + CH+ + R D + CF++ + Sbjct: 156 YRTGLYEAALAQAGITCHLPYEAERETLMR---GIYDGVKTGD--MAYAQSCFVDVAQRL 210 Query: 192 T----DV-IVLACT 200 DV +++ CT Sbjct: 211 IGRHGDVPLIMGCT 224 >gi|261364665|ref|ZP_05977548.1| aspartate racemase [Neisseria mucosa ATCC 25996] gi|288567274|gb|EFC88834.1| aspartate racemase [Neisseria mucosa ATCC 25996] Length = 230 Score = 40.7 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+ ++A NT + ++ + L V A A + Sbjct: 63 VLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAA--GIPLLHVVDATAAAIKRQGLSAV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + S Q + R+ + E + Sbjct: 121 GLLGTRFTMSDGFYTERMGSQGVQTITPTAAEQDEIHRIIFDELCLNRIRPESARYFYDV 180 Query: 184 FIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 181 IGRLKNEGAQGVILGCT 197 >gi|197105440|ref|YP_002130817.1| aspartate racemase [Phenylobacterium zucineum HLK1] gi|196478860|gb|ACG78388.1| aspartate racemase [Phenylobacterium zucineum HLK1] Length = 230 Score = 40.7 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 52/172 (30%), Gaps = 15/172 (8%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 ++ ++ L + A NT + + + A QA Sbjct: 58 DETGRQFAEAARRLVAAGAEGLMICA-NTMHLNAPQVAEA--GGVPLIHIADATAQALKA 114 Query: 118 TQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 +L+T T+ + Y L + L + + + C I+E+ Sbjct: 115 RGVARPLLLATRFTMEKPFYLDRLRGQGLDGFAPEAADRERLHAIIYDELCQGVIREES- 173 Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS-PWPVDW--LDNSDS 225 ++E+ G D ++ CT L P + +D++ + Sbjct: 174 RREVLGIIERGRAAGADGVIFGCT-------EIGLLLDPADMALPTVDSAVA 218 >gi|294669115|ref|ZP_06734199.1| aspartate racemase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308929|gb|EFE50172.1| aspartate racemase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 230 Score = 40.7 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+ ++A NT + ++ + L V A A + Sbjct: 63 VLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAA--GIPLLHVVDATAAAIKRQGLSAV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + S Q + R+ + E + Sbjct: 121 GLLGTRFTMSDGFYTERMGSQGVQTITPTAAEQDEIHRIIFDELCLNRIRPESARYFYDV 180 Query: 184 FIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 181 IGRLKNEGAQGVILGCT 197 >gi|206978258|ref|ZP_03239137.1| aspartate racemase family protein [Bacillus cereus H3081.97] gi|206743559|gb|EDZ54987.1| aspartate racemase family protein [Bacillus cereus H3081.97] Length = 232 Score = 40.7 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L +I NT + ++++ + L A + + +L T T Sbjct: 71 LQMGGADFIIICTNTM-HKVIEKIKKNI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188 + + + + I + + L + + V E I + E K + ++K Sbjct: 129 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 188 Query: 189 GKRTDVIVLACT 200 + +L CT Sbjct: 189 AQGI---ILGCT 197 >gi|169840382|ref|ZP_02873570.1| hypothetical protein cdivTM_25134 [candidate division TM7 single-cell isolate TM7a] Length = 52 Score = 40.7 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 15/39 (38%), Gaps = 1/39 (2%) Query: 204 LIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242 L+ ++ P + +D + A + +L + + Sbjct: 6 LLKDAISKIYP-DIKIVDPAKETALDLKEILEQNEFLKN 43 >gi|254423626|ref|ZP_05037344.1| aspartate racemase subfamily [Synechococcus sp. PCC 7335] gi|196191115|gb|EDX86079.1| aspartate racemase subfamily [Synechococcus sp. PCC 7335] Length = 237 Score = 40.7 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 16/146 (10%), Positives = 43/146 (29%), Gaps = 13/146 (8%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 L+ + L+ ++A NT A + ++ + A Sbjct: 60 IANLLATAAAQLEGAGAECILLATNTMHKVAEAITLST------TIPLIHIADATADEIK 113 Query: 117 YTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKED 174 + +L T T+ ++ L++ + + + + + + C + Sbjct: 114 RHAIQRVGLLGTRFTMEESFYKGRLVNQHGLTVQVPNEIERHAIHDIIYNELCLGQ-TRP 172 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200 + + + I+L CT Sbjct: 173 ASRDQFRAVISNLVDSGAEAIILGCT 198 >gi|221065474|ref|ZP_03541579.1| aspartate racemase [Comamonas testosteroni KF-1] gi|220710497|gb|EED65865.1| aspartate racemase [Comamonas testosteroni KF-1] Length = 252 Score = 40.7 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 5/103 (4%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159 S+ F+ + AA ++ +L T T+ + + L + + + + Sbjct: 119 SIPFVHIADPVGAAARAAGVQVLGLLGTRFTMEQPFMRERLEQQFGLKVLVPGEAERTQV 178 Query: 160 SRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 R+ EE G D +K + + +VL CT Sbjct: 179 HRIIYEELCAGQI--SDVSRKLYQRAIESLAARGAQAVVLGCT 219 >gi|134296325|ref|YP_001120060.1| aspartate racemase [Burkholderia vietnamiensis G4] gi|134139482|gb|ABO55225.1| aspartate racemase [Burkholderia vietnamiensis G4] Length = 230 Score = 40.7 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 39/136 (28%), Gaps = 7/136 (5%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT + ++ FL A +++L Sbjct: 67 AARRLEAAGADLIVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGNALRAAGVERVALLG 124 Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCF 184 T T+ + L + + + R+ +E G + Sbjct: 125 TRYTMELPFYAQRLRDRFGLDVLVPDEPARADVHRIIYDELCHGRIDAHS--RATYVAII 182 Query: 185 IEKEGKRTDVIVLACT 200 E + ++L CT Sbjct: 183 DELARRGAQAVILGCT 198 >gi|228994390|ref|ZP_04154269.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442] gi|228765351|gb|EEM14026.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442] Length = 226 Score = 40.7 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 41/143 (28%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 ++ +L+ + ++ ++ NT E S+ L + Sbjct: 56 EEVQNQLVQVAKK-IECSGADCILMCSNT--VHQFAEEVEQAISIPLLHIGDVSAEEIVE 112 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + +Y + I V I + K Sbjct: 113 HDVKRIGLLGTKQTMEQDFYKTRLANYGVETIIPKKDERNFIHHVILQELSKGIISQQSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 173 VRFLQIIQKLIENGAEGILLGCT 195 >gi|157163967|ref|YP_001466390.1| aspartate racemase [Campylobacter concisus 13826] gi|112801614|gb|EAT98958.1| aspartate racemase [Campylobacter concisus 13826] Length = 230 Score = 40.7 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 13/101 (12%) Query: 56 EDHALKKRLMFLF-------------SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSM 102 ++ R F+ + +L ++ACNTA + + Sbjct: 41 SYAQIEDRTKFIMGEGESPLPKLIQSAKLLKNAGCEAMLMACNTAHYFAPSIEKEAGVKI 100 Query: 103 AFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS 143 + V Y + I++++T T + ++ Sbjct: 101 LHIAKVTIDALQKKYPHAKNIAVIATSGTKKAGVYDQILKE 141 >gi|260103044|ref|ZP_05753281.1| aspartate racemase [Lactobacillus helveticus DSM 20075] gi|260083134|gb|EEW67254.1| aspartate racemase [Lactobacillus helveticus DSM 20075] gi|328464395|gb|EGF35804.1| aspartate racemase [Lactobacillus helveticus MTCC 5463] Length = 249 Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 15/135 (11%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127 DK V+ CNTA D+L + FL ++ A Y I +++ Sbjct: 73 DKLGTDYFVMPCNTA-HYFYDDL-AALTDKPFLHM---MRIAVHNFIDNYPDEKKIGLIA 127 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186 T ++ ++ I + + V E ++ + ++ Sbjct: 128 TEGSIYDHLYADEIQKVGRTVE---LGGPEIQPMVNELIYSDIKEKGIVDHDLYHKILKT 184 Query: 187 KEGK-RTDVIVLACT 200 K +VI+L CT Sbjct: 185 MHDKYGCNVILLGCT 199 >gi|291288437|ref|YP_003505253.1| aspartate racemase [Denitrovibrio acetiphilus DSM 12809] gi|290885597|gb|ADD69297.1| aspartate racemase [Denitrovibrio acetiphilus DSM 12809] Length = 230 Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 1/109 (0%) Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151 ++R + S+ FL A ++L T T+ + +S + Sbjct: 90 APDVRRSV-SIPFLHIAEATAAEINIAGYKKAALLGTRFTMEEDFLKKEFNSKGIEIITP 148 Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 M L ++ I +DE + + + +L CT Sbjct: 149 DRDDMKLVDKIIFSELVKGIVKDESRDMLLQILDNLHEQGAQCAILGCT 197 >gi|170733497|ref|YP_001765444.1| aspartate racemase [Burkholderia cenocepacia MC0-3] gi|169816739|gb|ACA91322.1| aspartate racemase [Burkholderia cenocepacia MC0-3] Length = 230 Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 39/134 (29%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT + ++ FL A +++L Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGSALRAAGVERVALLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + + L + + R+ + +E + E Sbjct: 125 TRYTMELPFYAARLREKFGLDVLVPDERGRDDVHRIIYDELCHGVISEESRATYVSIIDE 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LARRGAQAVILGCT 198 >gi|255065269|ref|ZP_05317124.1| aspartate racemase [Neisseria sicca ATCC 29256] gi|255050690|gb|EET46154.1| aspartate racemase [Neisseria sicca ATCC 29256] Length = 230 Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 49/142 (34%), Gaps = 12/142 (8%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+ ++A NT + ++ + L V A A + Sbjct: 63 VLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAA--GIPLLHVVDATAAAIKRQGLSAV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKEIEG 182 +L T T+ + + + S + ++ A + E ++ + I+ E Sbjct: 121 GLLGTRFTMSDGFYTERMGSQG----VKTIA-PTTAEQDEIHRIIFDELCLNRIRPESAR 175 Query: 183 CFIE----KEGKRTDVIVLACT 200 F + + + ++L CT Sbjct: 176 YFYDVIGRLKNEGAQGVILGCT 197 >gi|160937014|ref|ZP_02084377.1| hypothetical protein CLOBOL_01902 [Clostridium bolteae ATCC BAA-613] gi|158439915|gb|EDP17663.1| hypothetical protein CLOBOL_01902 [Clostridium bolteae ATCC BAA-613] Length = 230 Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L+ +I NT ++ + + + A Q Q + Sbjct: 63 ILGTAAKSLEAAGADFILICTNTMHKVVPQI--ESMIQIPIIHIADATAQELLACQIRKV 120 Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 +L T T+ + + LI + I+ + C I+E+ +++ + Sbjct: 121 GLLGTKYTMTQDFYKQRLIDRGIDVITPDAADIDIVNDIIFHELCVGNIREES-RRQFQV 179 Query: 183 CFIEKEGKRTDVIVLACT 200 + K ++L CT Sbjct: 180 VIDNLKAKGAHGVILGCT 197 >gi|160895521|ref|YP_001561103.1| aspartate racemase [Delftia acidovorans SPH-1] gi|160361105|gb|ABX32718.1| aspartate racemase [Delftia acidovorans SPH-1] Length = 253 Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 15/156 (9%) Query: 82 IACNTAFTLIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSG---LISILSTPATLRRTYT 137 +ACNTA +L++ FP + L +QAA + Q+G +L+T T Sbjct: 97 LACNTA--HAWHGQLQALFPQLHVLHI---ARQAALHLQAGGAQQAIVLATQGTYDSGLY 151 Query: 138 SNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV-I 195 + + L + + + D + + DV + Sbjct: 152 DAALAECGITALQPDAQGRARLMQGIYDGVKQGDM--DLAARCFGEVLAPLLQRHGDVPV 209 Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 ++ CT PL + + +D + +A+ Sbjct: 210 IMGCTEIPLALP--QSPLARGAGLVDPAWILAQALA 243 >gi|149377025|ref|ZP_01894776.1| Aspartate racemase [Marinobacter algicola DG893] gi|149358683|gb|EDM47154.1| Aspartate racemase [Marinobacter algicola DG893] Length = 231 Score = 40.3 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 42/150 (28%), Gaps = 9/150 (6%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+W R++ + L +I NT + + + L A Sbjct: 55 GDWPA---TARILSSAALSLQNAGADFLMIGTNTMHKVAPEI--ELAVRIPLLHIADATA 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIK 170 + +L T T+ + + + + + + RV EE G Sbjct: 110 NVLTEDGITRVGLLGTRFTMEQAFYRERLEAAGIEVVTPDAAQRAEVHRVIYEELCQGKI 169 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 ++ + ++L CT Sbjct: 170 QAAS--REAYLAVIDSLAEQGAQAVILGCT 197 >gi|91975729|ref|YP_568388.1| aspartate racemase [Rhodopseudomonas palustris BisB5] gi|91682185|gb|ABE38487.1| aspartate racemase [Rhodopseudomonas palustris BisB5] Length = 239 Score = 40.3 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 40/141 (28%), Gaps = 6/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L +I NT + + + L + + Sbjct: 61 AKVLQKIARELQAAGADCVLICTNTM--HKLADAVQSAIDVPLLNIIDICALELKAAGAR 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKE 179 +L+T T+ + + + + + + E CGI + ++ Sbjct: 119 KPLLLATRYTMEHDFYRERMGRHGVETIVPDADDRTAVHDIIFSELCCGIIRDDSRVR-- 176 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 D ++L CT Sbjct: 177 YMDVIARGRAAGADSVILGCT 197 >gi|229153749|ref|ZP_04281890.1| Aspartate racemase [Bacillus cereus m1550] gi|228629702|gb|EEK86389.1| Aspartate racemase [Bacillus cereus m1550] Length = 226 Score = 40.3 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 65/206 (31%), Gaps = 31/206 (15%) Query: 14 NSILIFDSGIGGLI------VLQKMRFL-MPEYH-----FIYVADDVGFPYGNWED---- 57 I + IGGL + + L + +Y +Y D +G Sbjct: 2 KVIGL----IGGLSWESTSLYYKHINTLTLSQYDQNAKLILYSMD-----FGEVTTLLQN 52 Query: 58 ---HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 53 YQYEEVKNELVKVAKK-VEKSGAECLLMCSNTVHLFAEEIEQAISIPLLHIGDVSA-KEM 110 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 I +L T T+ + + + + Y + I V I + Sbjct: 111 VEQNI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISE 169 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200 KK + + I+L CT Sbjct: 170 TSKKRLLQITKSLIQNGAEGILLGCT 195 >gi|196046874|ref|ZP_03114095.1| aspartate racemase family protein [Bacillus cereus 03BB108] gi|196022249|gb|EDX60935.1| aspartate racemase family protein [Bacillus cereus 03BB108] Length = 232 Score = 40.3 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 42/137 (30%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L +I NT ++ ++++ + L A + + Sbjct: 63 VLGNAAYSLQSAGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + I I + V + + ++ + Sbjct: 121 GLLGTKYTMEQDFYKLRIEENHVNVMIPSKKDREKINEVIYTELCLGKVTSQSRQYYKRV 180 Query: 184 FIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 181 IEDLVQEGVQGIILGCT 197 >gi|254459871|ref|ZP_05073287.1| hydantoin racemase [Rhodobacterales bacterium HTCC2083] gi|206676460|gb|EDZ40947.1| hydantoin racemase [Rhodobacteraceae bacterium HTCC2083] Length = 227 Score = 40.3 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 10/124 (8%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 VIAC D +R T S+ LG A AA+ S S+++T + Sbjct: 66 DVDAIVIAC--FDDTGVDAVR-TLVSVPVLGIGEAAYHAASMVASK-FSVITTLSRSVPG 121 Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 +NL+ ++Q + ++ I ++EE G ++I+ EI + + I Sbjct: 122 LENNLMRYGLAQKCARVRATEIPVLKLEE---GDPDTLEKIRAEIRSAI---KEDNAEAI 175 Query: 196 VLAC 199 VL C Sbjct: 176 VLGC 179 >gi|228993503|ref|ZP_04153412.1| amino-acid racemase [Bacillus pseudomycoides DSM 12442] gi|228766218|gb|EEM14863.1| amino-acid racemase [Bacillus pseudomycoides DSM 12442] Length = 235 Score = 40.3 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 3/72 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L EL+++ IK+ +++L+T AT Sbjct: 78 LENTGVDFIAMPCNTA-HLYFYELQNSISVPILNMVDETIKEIPD--HVRKVALLATDAT 134 Query: 132 LRRTYTSNLIHS 143 ++ + I Sbjct: 135 VQSGIYQDGIAK 146 >gi|224367886|ref|YP_002602049.1| RacD2 [Desulfobacterium autotrophicum HRM2] gi|223690602|gb|ACN13885.1| RacD2 [Desulfobacterium autotrophicum HRM2] Length = 234 Score = 40.3 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 5/141 (3%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 R++ + ++ +I NT + E++ + L A + A Q Sbjct: 61 ARILSEAAKNVESAGADFLLICTNTMHKVA-PEIQGAI-QIPLLHIADATAETLAGEQIK 118 Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179 + +L T T+ + + L ++ + + + + + C KI+ D K Sbjct: 119 TVGLLGTSFTMEQDFYRGRLRDTHGLNVLVPNDNDRKIVHDTIYQELCLGKIRSDS-KAA 177 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 178 FLRIIGSLADQGAEAVILGCT 198 >gi|254302674|ref|ZP_04970032.1| aspartate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322866|gb|EDK88116.1| aspartate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 231 Score = 40.3 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 41/129 (31%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K VI NT ++ + + L I +L T T Sbjct: 71 LEKAGADFIVICTNTMHKVVSGI--KKYTKLPILHIAEMTAIELKKAGIKKIGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +++ + ++ + I + + + V + + E K+E + Sbjct: 129 MQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIFNELCLGKIKKESKEEYLRIIKDLSKAG 188 Query: 192 TDVIVLACT 200 ++L CT Sbjct: 189 AKGVILGCT 197 >gi|228952962|ref|ZP_04115024.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229070097|ref|ZP_04203364.1| Aspartate racemase [Bacillus cereus F65185] gi|229079818|ref|ZP_04212350.1| Aspartate racemase [Bacillus cereus Rock4-2] gi|228703402|gb|EEL55856.1| Aspartate racemase [Bacillus cereus Rock4-2] gi|228713011|gb|EEL64919.1| Aspartate racemase [Bacillus cereus F65185] gi|228806683|gb|EEM53240.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 226 Score = 40.3 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + I +L T T+ + + + + Y + I V I + K Sbjct: 114 SI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTFIHHVILDELSRGIISETSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195 >gi|228927696|ref|ZP_04090745.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229125032|ref|ZP_04254197.1| Aspartate racemase [Bacillus cereus 95/8201] gi|228658408|gb|EEL14083.1| Aspartate racemase [Bacillus cereus 95/8201] gi|228831946|gb|EEM77534.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 226 Score = 40.3 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116 K + + ++K ++ NT + E + S+ +G V A K+ Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 I +L T T+ + + + + +Y + I V I + Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISETS 171 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195 >gi|237732212|ref|ZP_04562693.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226907751|gb|EEH93669.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 229 Score = 40.3 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 39/129 (30%), Gaps = 4/129 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ VI CNTA +EL+ + L V I +L+T AT Sbjct: 61 LEDAGAECIVIPCNTA-HFWFNELKECCHT-ELLSIVETTMNEVKNCGKSRIGLLATNAT 118 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 L I S C S +E C + + + Sbjct: 119 LYMGLYQKGIESLGLTC--ISPDSSGQEKVMESIYCLKAGDLKRAQTLMNEQAEVLFSRG 176 Query: 192 TDVIVLACT 200 +IVL CT Sbjct: 177 AQIIVLGCT 185 >gi|332978050|gb|EGK14788.1| glutamate racemase [Desmospora sp. 8437] Length = 72 Score = 40.3 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 7/52 (13%), Positives = 17/52 (32%), Gaps = 3/52 (5%) Query: 219 WLDNSDSIARRARCLLPRINTHQTRVF---DDHALFLSGKPDIAMRRLMQGF 267 + +++ R +L + ++H F SG+P + Sbjct: 1 LISSAEETTRELIAILRGDGLLREGPPCGPEEHLFFTSGRPSSFRDIAERWL 52 >gi|228946256|ref|ZP_04108585.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813420|gb|EEM59712.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 226 Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116 K + + ++K ++ NT + E + S+ +G + A K+ Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDISA-KEMVE 112 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 I +L T T+ + + + + +Y + I V I + Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195 >gi|213864776|ref|ZP_03386895.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 172 Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 17/131 (12%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAAYTQSGLISILSTP 129 VI CNTA D+L++ + LG +P + + +L+T Sbjct: 3 GAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--------HVGLLATN 53 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ATL + + A ++ + + + + Sbjct: 54 ATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAAQALLLPQIDSLIA 111 Query: 190 KRTDVIVLACT 200 + I++ CT Sbjct: 112 RGAQAIIMGCT 122 >gi|126642247|ref|YP_001085231.1| aspartate racemase [Acinetobacter baumannii ATCC 17978] Length = 218 Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 L ++ + V C NT + ++ F+ A + Sbjct: 38 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 93 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179 +++L T T+ + + + + I ++ + S + + C I D K Sbjct: 94 RKVALLGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSIIYDELCLGLINPDSQNKY 153 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 E G+ + I+L CT Sbjct: 154 -MTIVEELIGQGAEGIILGCT 173 >gi|300718190|ref|YP_003742993.1| aspartate racemase [Erwinia billingiae Eb661] gi|299064026|emb|CAX61146.1| aspartate racemase [Erwinia billingiae Eb661] Length = 232 Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 41/122 (33%), Gaps = 3/122 (2%) Query: 80 SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V+ NT + + + + FL A +A + +++L T T+ + + Sbjct: 79 IVLCTNTMHKVAAPIVEQS--GLPFLHIAEATAKAIQQQKMSRVALLGTRYTMEQDFYRG 136 Query: 140 -LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 L + + + ++ +R+ + K + + + I+ Sbjct: 137 PLASEFGIETLVPDAAARQEVNRIIFEQLCLGEFSPASKAYYQQVIAGLVAEGAEGIIFG 196 Query: 199 CT 200 CT Sbjct: 197 CT 198 >gi|301119861|ref|XP_002907658.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262106170|gb|EEY64222.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 269 Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 6/93 (6%) Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIH-SYVSQCHIH-LVSSMILASRVEEYACGIKI 171 A + ++ST T +L+ + ++ V L + G+K Sbjct: 171 ANKLPSCKRVGLMSTTGTRNSRVYHDLMEPRGYTVVEVYAGVMQQELHESIYNREWGVKS 230 Query: 172 KEDEI----KKEIEGCFIEKEGKRTDVIVLACT 200 + + + + +VI+L CT Sbjct: 231 TAPSVSSRSEANFHRYALHLREQGAEVIILGCT 263 >gi|184158722|ref|YP_001847061.1| aspartate racemase [Acinetobacter baumannii ACICU] gi|332873715|ref|ZP_08441658.1| aspartate racemase [Acinetobacter baumannii 6014059] gi|183210316|gb|ACC57714.1| Aspartate racemase [Acinetobacter baumannii ACICU] gi|322507467|gb|ADX02921.1| Aspartate racemase [Acinetobacter baumannii 1656-2] gi|332738103|gb|EGJ68987.1| aspartate racemase [Acinetobacter baumannii 6014059] Length = 242 Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 L ++ + V C NT + ++ F+ A + Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179 +++L T T+ + + + + I ++ + S + + C I D K Sbjct: 118 RKVALLGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSIIYDELCLGVINPDSQHKY 177 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 E G+ + I+L CT Sbjct: 178 -TTIVEELIGQGAEGIILGCT 197 >gi|30250122|ref|NP_842192.1| hypothetical protein NE2188 [Nitrosomonas europaea ATCC 19718] gi|30139229|emb|CAD86099.1| hypothetical protein NE2188 [Nitrosomonas europaea ATCC 19718] Length = 95 Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 12/29 (41%) Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHV 208 + +DVIVL CTH+ + Sbjct: 32 LNQYLAPAVSMASDVIVLGCTHFTFLADQ 60 >gi|269138506|ref|YP_003295206.1| putative aspartate/glutamate racemase [Edwardsiella tarda EIB202] gi|267984166|gb|ACY83995.1| putative aspartate/glutamate racemase [Edwardsiella tarda EIB202] gi|304558529|gb|ADM41193.1| aspartate racemase [Edwardsiella tarda FL6-60] Length = 231 Score = 40.3 bits (94), Expect = 0.31, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 42/141 (29%), Gaps = 7/141 (4%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 ++ + L I NT + + +++ + + A + Sbjct: 62 HILAQAATSLRAAGAEAIAICTNTMHKVAEQVAQAS--GLPLIHIADATARQVQRQHIRR 119 Query: 123 ISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKE 179 + +L T T+ + + L + + R+ EE G + ++E Sbjct: 120 VGLLGTRFTMEQDFYRGRLQDKFGIDVVTPAAADRDSVHRIIYEELCLGRILDAS--RQE 177 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 E + I+ CT Sbjct: 178 YRRIISSLEQQGAQGIIFGCT 198 >gi|228985744|ref|ZP_04145894.1| Aspartate racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229156233|ref|ZP_04284329.1| Aspartate racemase [Bacillus cereus ATCC 4342] gi|228627108|gb|EEK83839.1| Aspartate racemase [Bacillus cereus ATCC 4342] gi|228773916|gb|EEM22332.1| Aspartate racemase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 226 Score = 40.3 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 7/145 (4%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115 +K L+ + ++K ++ NT + E S+ +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVENAISIPLLHIGDVSA-KEMV 111 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 I +L T T+ + + + + ++ + I V I + Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANFNIETIIPNKEERNFIHHVILNELSKGIISET 170 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195 >gi|218903772|ref|YP_002451606.1| aspartate racemase family protein [Bacillus cereus AH820] gi|218538671|gb|ACK91069.1| aspartate racemase family protein [Bacillus cereus AH820] Length = 226 Score = 40.3 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116 K + + ++K ++ NT + E + S+ +G V A K+ Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 I +L T T+ + + + + +Y + I V I + Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISETS 171 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195 >gi|196032514|ref|ZP_03099928.1| aspartate racemase family protein [Bacillus cereus W] gi|195995265|gb|EDX59219.1| aspartate racemase family protein [Bacillus cereus W] Length = 226 Score = 39.9 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116 K + + ++K ++ NT + E + S+ +G V A K+ Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 I +L T T+ + + + + +Y + I V I + Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195 >gi|328956897|ref|YP_004374283.1| aspartate racemase [Carnobacterium sp. 17-4] gi|328673221|gb|AEB29267.1| aspartate racemase [Carnobacterium sp. 17-4] Length = 234 Score = 39.9 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 41/127 (32%), Gaps = 10/127 (7%) Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 P V+ CNTA I D + +T S+ + + + I + T TL Sbjct: 77 PDFIVMPCNTAHYFINDLIDAT--SIPIINMIKETVATIPSNTTKKIGLAVTQGTLESQL 134 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI---KKEIEGCFIEKEGKRTD 193 + + + + L ++ E ++ I E ++ G Sbjct: 135 YEREL--LFNGYEVI-LPDTTLQHKINELIYTYIKEQAIINLLLYEEILEEFQQLGSDI- 190 Query: 194 VIVLACT 200 + L CT Sbjct: 191 TL-LGCT 196 >gi|302349008|ref|YP_003816646.1| Acetyl coenzym A synthetase (ADP-forming) [Acidilobus saccharovorans 345-15] gi|302329420|gb|ADL19615.1| Acetyl coenzym A synthetase (ADP-forming) [Acidilobus saccharovorans 345-15] Length = 712 Score = 39.9 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 39/127 (30%), Gaps = 17/127 (13%) Query: 87 AFTLIKDELRSTFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPATLR--------RTY 136 A ++ ++L+ F + L GA+P + A T SG +++T + Sbjct: 280 ANAIVVEDLQEMFDAAKVLSSGALPRSPRVAVITNSGGHGVIATDNLVSRGLQVPQPSQA 339 Query: 137 TSNLIHSYVSQ-------CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 T + + Q + + V E + + + Sbjct: 340 TLDALKGLFPQRVSLRNPFDLTGDARPEQVELVAETLLSNNDADALLLVALVQPPTMDLN 399 Query: 190 KRTDVIV 196 K D I+ Sbjct: 400 KTFDTII 406 >gi|270262917|ref|ZP_06191188.1| hypothetical protein SOD_c05430 [Serratia odorifera 4Rx13] gi|270043601|gb|EFA16694.1| hypothetical protein SOD_c05430 [Serratia odorifera 4Rx13] Length = 230 Score = 39.9 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 7/125 (5%) Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 VI NT + + + + A I +L T T+ + + Sbjct: 78 AIVICTNTMHKVA--DAVEQASGLPLIHIADATALQVRQQGIRRIGLLGTRFTMEQDFYR 135 Query: 139 -NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L + + + + R+ EE G D + E + E + I Sbjct: 136 GRLQERHGIEVVTPTSADRDIVHRIIYEELCLGTI--RDASRDEYRRIIADLEQQGAQGI 193 Query: 196 VLACT 200 + CT Sbjct: 194 IFGCT 198 >gi|119945765|ref|YP_943445.1| aspartate racemase [Psychromonas ingrahamii 37] gi|119864369|gb|ABM03846.1| aspartate racemase [Psychromonas ingrahamii 37] Length = 229 Score = 39.9 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 49/173 (28%), Gaps = 7/173 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 ++ + + +I NT + + L A + Sbjct: 61 AEILIEAAKNVQSAGADFLLICTNTMHKVAPQI--EKAIDIPLLHIADATAEVLVKNGIK 118 Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L T T+ + + L +Y + + V + K E Sbjct: 119 TVGLLGTAFTMEQDFYKSRLSENYGLTVLVPNEIDRAIIHNVIYKELCLGKMLPASKVEY 178 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 + + ++L CT + + + + V LD + A++A Sbjct: 179 LRIIESLANQGAEAVILGCT----EIGMLVEQADTKVTLLDTAAIHAQKAVEY 227 >gi|260554538|ref|ZP_05826759.1| aspartate racemase [Acinetobacter baumannii ATCC 19606] gi|260411080|gb|EEX04377.1| aspartate racemase [Acinetobacter baumannii ATCC 19606] Length = 242 Score = 39.9 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 L ++ + V C NT + ++ F+ A + Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179 +++L T T+ + + + + I ++ + S + + C I D K Sbjct: 118 RKVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSIIYDELCLGVINPDSQNKY 177 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 E G+ + I+L CT Sbjct: 178 -MTIVEELIGQGAEGIILGCT 197 >gi|256851858|ref|ZP_05557246.1| aspartate racemase [Lactobacillus jensenii 27-2-CHN] gi|260661881|ref|ZP_05862791.1| aspartate racemase [Lactobacillus jensenii 115-3-CHN] gi|282931964|ref|ZP_06337428.1| aspartate racemase [Lactobacillus jensenii 208-1] gi|297205482|ref|ZP_06922878.1| aspartate racemase [Lactobacillus jensenii JV-V16] gi|256615816|gb|EEU21005.1| aspartate racemase [Lactobacillus jensenii 27-2-CHN] gi|260547350|gb|EEX23330.1| aspartate racemase [Lactobacillus jensenii 115-3-CHN] gi|281303906|gb|EFA96044.1| aspartate racemase [Lactobacillus jensenii 208-1] gi|297150060|gb|EFH30357.1| aspartate racemase [Lactobacillus jensenii JV-V16] Length = 250 Score = 39.9 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 52/151 (34%), Gaps = 12/151 (7%) Query: 57 DHALKKRLMFLFSDILDKY---QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 K+ F D ++K +P V+ CNTA +L + + FL + Sbjct: 54 KDHTKENFFFALKDDVEKQSLLKPDFFVMPCNTA-HYFYHDL-AALTDIPFLNMMDIAVH 111 Query: 114 AA--AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 + + I +++T ++ N I + + + V E Sbjct: 112 HFMEKFPKEEKIGLIATEGSIFDKLYENSIVKNGRKVE---LGGNEIQPLVNELIYSDIK 168 Query: 172 KEDEIKKEIEGCFIEK--EGKRTDVIVLACT 200 + + E+ + K + +VI+L CT Sbjct: 169 ENGYVDGELYHRILRKMHDDYGCNVILLGCT 199 >gi|220915676|ref|YP_002490980.1| aspartate racemase [Anaeromyxobacter dehalogenans 2CP-1] gi|219953530|gb|ACL63914.1| aspartate racemase [Anaeromyxobacter dehalogenans 2CP-1] Length = 234 Score = 39.9 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 39/132 (29%), Gaps = 9/132 (6%) Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151 LR P + V A + ++ ++ T T+ + + + + + + Sbjct: 91 LPALRPRSP-LPIADLVGATCEDVRAAGHRVVGLVGTRFTVSEPFFRDALEAAGVRVVVP 149 Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIVHVFR 210 + + K +K E+ + D +V+ACT Sbjct: 150 DEAGTDYLDALIFGPLARGEKTPTMKGELAAIVGRMARREPLDALVVACT-------DLM 202 Query: 211 QLSPWPVDWLDN 222 L V LD Sbjct: 203 DLMGTEVPLLDP 214 >gi|116513165|ref|YP_812072.1| aspartate racemase [Lactococcus lactis subsp. cremoris SK11] gi|125625258|ref|YP_001033741.1| RacD protein [Lactococcus lactis subsp. cremoris MG1363] gi|116108819|gb|ABJ73959.1| Aspartate racemase [Lactococcus lactis subsp. cremoris SK11] gi|124494066|emb|CAL99067.1| RacD protein [Lactococcus lactis subsp. cremoris MG1363] gi|300072068|gb|ADJ61468.1| aspartate racemase [Lactococcus lactis subsp. cremoris NZ9000] Length = 240 Score = 39.9 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 11/132 (8%) Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA---AYTQSGLISILSTPA 130 + P V+ CNTA DE++ + L P I + ++ + +++L+T Sbjct: 74 QLSPKFFVVPCNTA-HYYFDEMQKA-TEIPILHM-PRIAVDSIGRHFSDAKRVAVLATEG 130 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 T+ + + ++ L +V + + E+ + Sbjct: 131 TILTGVYREALEEQGYEA---VIPDEELQEKVNRLIYQEVKENRNLNFELYHEILSDVAS 187 Query: 191 RT--DVIVLACT 200 + +V +L CT Sbjct: 188 KMNCEVTILGCT 199 >gi|228999539|ref|ZP_04159117.1| amino-acid racemase [Bacillus mycoides Rock3-17] gi|229007097|ref|ZP_04164723.1| amino-acid racemase [Bacillus mycoides Rock1-4] gi|228754142|gb|EEM03561.1| amino-acid racemase [Bacillus mycoides Rock1-4] gi|228760250|gb|EEM09218.1| amino-acid racemase [Bacillus mycoides Rock3-17] Length = 235 Score = 39.9 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 3/72 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+ + CNTA L EL++ IK+ +++L+T AT Sbjct: 78 LENTGVDFIAMPCNTA-HLYFYELQNLISVPILNMVDETIKEIPD--HVRKVALLATDAT 134 Query: 132 LRRTYTSNLIHS 143 ++ + I Sbjct: 135 VQSGIYQDGIAK 146 >gi|30262624|ref|NP_845001.1| aspartate racemase family protein [Bacillus anthracis str. Ames] gi|47527931|ref|YP_019280.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49185467|ref|YP_028719.1| aspartate racemase family protein [Bacillus anthracis str. Sterne] gi|65319945|ref|ZP_00392904.1| COG1794: Aspartate racemase [Bacillus anthracis str. A2012] gi|165868472|ref|ZP_02213132.1| aspartate racemase family protein [Bacillus anthracis str. A0488] gi|167632270|ref|ZP_02390597.1| aspartate racemase family protein [Bacillus anthracis str. A0442] gi|167637551|ref|ZP_02395830.1| aspartate racemase family protein [Bacillus anthracis str. A0193] gi|170685313|ref|ZP_02876537.1| aspartate racemase family protein [Bacillus anthracis str. A0465] gi|170704650|ref|ZP_02895116.1| aspartate racemase family protein [Bacillus anthracis str. A0389] gi|177649807|ref|ZP_02932809.1| aspartate racemase family protein [Bacillus anthracis str. A0174] gi|190565232|ref|ZP_03018152.1| aspartate racemase family protein [Bacillus anthracis Tsiankovskii-I] gi|227814544|ref|YP_002814553.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684] gi|228915256|ref|ZP_04078850.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228933925|ref|ZP_04096768.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229601854|ref|YP_002866941.1| aspartate racemase family protein [Bacillus anthracis str. A0248] gi|254685210|ref|ZP_05149070.1| aspartate racemase family protein [Bacillus anthracis str. CNEVA-9066] gi|254722617|ref|ZP_05184405.1| aspartate racemase family protein [Bacillus anthracis str. A1055] gi|254737661|ref|ZP_05195364.1| aspartate racemase family protein [Bacillus anthracis str. Western North America USA6153] gi|254743159|ref|ZP_05200844.1| aspartate racemase family protein [Bacillus anthracis str. Kruger B] gi|254751976|ref|ZP_05204013.1| aspartate racemase family protein [Bacillus anthracis str. Vollum] gi|254760497|ref|ZP_05212521.1| aspartate racemase family protein [Bacillus anthracis str. Australia 94] gi|301054176|ref|YP_003792387.1| aspartate racemase [Bacillus anthracis CI] gi|30257256|gb|AAP26487.1| aspartate racemase family protein [Bacillus anthracis str. Ames] gi|47503079|gb|AAT31755.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49179394|gb|AAT54770.1| aspartate racemase family protein [Bacillus anthracis str. Sterne] gi|164715198|gb|EDR20715.1| aspartate racemase family protein [Bacillus anthracis str. A0488] gi|167514100|gb|EDR89467.1| aspartate racemase family protein [Bacillus anthracis str. A0193] gi|167532568|gb|EDR95204.1| aspartate racemase family protein [Bacillus anthracis str. A0442] gi|170130451|gb|EDS99312.1| aspartate racemase family protein [Bacillus anthracis str. A0389] gi|170670673|gb|EDT21412.1| aspartate racemase family protein [Bacillus anthracis str. A0465] gi|172084881|gb|EDT69939.1| aspartate racemase family protein [Bacillus anthracis str. A0174] gi|190563259|gb|EDV17224.1| aspartate racemase family protein [Bacillus anthracis Tsiankovskii-I] gi|227005097|gb|ACP14840.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684] gi|228825621|gb|EEM71411.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228844373|gb|EEM89430.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266262|gb|ACQ47899.1| aspartate racemase family protein [Bacillus anthracis str. A0248] gi|300376345|gb|ADK05249.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI] Length = 226 Score = 39.9 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116 K + + ++K ++ NT + E + S+ +G V A K+ Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 I +L T T+ + + + + +Y + I V I + Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195 >gi|229173304|ref|ZP_04300848.1| Aspartate racemase [Bacillus cereus MM3] gi|228609998|gb|EEK67276.1| Aspartate racemase [Bacillus cereus MM3] Length = 226 Score = 39.9 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 7/145 (4%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115 +K L+ + ++K ++ NT + E S+ +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGADCLLMCSNTI--HLFAEEVENAISIPLLHIGDVSA-KEMV 111 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 I +L T T+ + + + + ++ + I V I + Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANFNIETIIPTEEERNFIHHVILNELSKGIISET 170 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 171 SKEKLLQITNSLIQNGAEGILLGCT 195 >gi|49479190|ref|YP_036748.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49330746|gb|AAT61392.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 226 Score = 39.9 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116 K + + ++K ++ NT + E + S+ +G V A K+ Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 I +L T T+ + + + + +Y + I V I + Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195 >gi|312960825|ref|ZP_07775330.1| aspartate racemase [Pseudomonas fluorescens WH6] gi|311284483|gb|EFQ63059.1| aspartate racemase [Pseudomonas fluorescens WH6] Length = 230 Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L V+ NT L S+ FL A AA + + Sbjct: 63 ILEDAARRLQAGGAECVVLCTNTMHKLAPHI--EAAVSIPFLHIADAAALAAVEAGTLTV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + + + + RV + + D ++ + Sbjct: 121 GLLGTAFTMEQDFLKSRLAGHGLTVLVPDADERKEVHRVIYEELCVGVISDTSRRTYQRV 180 Query: 184 FIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 181 IKSLAARGAQAIILGCT 197 >gi|196040325|ref|ZP_03107626.1| aspartate racemase family protein [Bacillus cereus NVH0597-99] gi|196028810|gb|EDX67416.1| aspartate racemase family protein [Bacillus cereus NVH0597-99] Length = 226 Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116 K + + ++K ++ NT + E + S+ +G V A K+ Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 I +L T T+ + + + + +Y + I V I + Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195 >gi|154175071|ref|YP_001407588.1| aspartate racemase [Campylobacter curvus 525.92] gi|153793172|gb|EAU01193.2| aspartate racemase subfamily [Campylobacter curvus 525.92] Length = 230 Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 44/137 (32%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + IL + I NT + + D ++S S+ + A + + Sbjct: 63 ILAAHARILQRGGADAIFICTNTMY-KVYDAVQSAV-SVPVVHIATATLKELKRCDIDKV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + + M L + V K++ Sbjct: 121 GLLGTIYTMSEPFYKDELMRGGVEVITPNADEMKLVNDVIFDELCHGEISPASKQKFLSI 180 Query: 184 FIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 181 IVNLKACGAKGVILGCT 197 >gi|262279604|ref|ZP_06057389.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202] gi|262259955|gb|EEY78688.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202] Length = 247 Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 45/131 (34%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K ++ NT + ++ F+ A + +++L T T Sbjct: 71 LEKAGAECILVCTNTMHKIAPQI--EDAITVPFIHIADATAKEIVSQDIRKVALLGTAFT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + + I + + + EE G+ + +++ E Sbjct: 129 MEQDFYKARLQDHGIDVIIPNEADRKIVHHIIYEELCLGVINSDS--RQKYETIVEALIT 186 Query: 190 KRTDVIVLACT 200 + + I+L CT Sbjct: 187 EGAEGIILGCT 197 >gi|228997618|ref|ZP_04157228.1| Aspartate racemase [Bacillus mycoides Rock3-17] gi|228762127|gb|EEM11063.1| Aspartate racemase [Bacillus mycoides Rock3-17] Length = 226 Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 42/143 (29%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 ++ +L+ + ++ ++ NT E S+ L + Sbjct: 56 EEVQNQLVQVAKK-IECSGADCILMCSNT--VHQFAEEVEQAISIPLLHIGDVSAEEIVE 112 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + +Y + I V + I + K Sbjct: 113 HDVKRIGLLGTKQTMEQDFYKTRLANYGVETIIPKEDERNFIHHVILHELSKGIISQQSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 173 VRFLQIIQKLIENGAEGILLGCT 195 >gi|222107169|ref|YP_002547960.1| hydantoin Racemase [Agrobacterium vitis S4] gi|221738348|gb|ACM39244.1| hydantoin Racemase [Agrobacterium vitis S4] Length = 258 Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 19/131 (14%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K ++IAC D R+ S+ +G A ++ S T+ Sbjct: 65 EKQGADAAIIAC--FDDTGLDAARA-LASIPVIGICEAAIATVSFIAQK----FSVVTTM 117 Query: 133 RRTYT--SNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 R+ +L+ Y + +C + +L D ++ EI + + Sbjct: 118 ERSRLPIEHLVRRYGASDRCKVRAADIPVL-----SLEDPSSNARDRLRAEIAKALAQDD 172 Query: 189 GKRTDVIVLAC 199 + I+L C Sbjct: 173 A---EAIILGC 180 >gi|47569596|ref|ZP_00240273.1| aspartate racemase [Bacillus cereus G9241] gi|47553711|gb|EAL12085.1| aspartate racemase [Bacillus cereus G9241] Length = 226 Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 7/145 (4%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115 +K L+ + ++K ++ NT + E + S+ +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMV 111 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 I +L T T+ + + + + +Y + I V I + Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNKEERNFIHHVILNELSKGIISET 170 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195 >gi|229005219|ref|ZP_04162937.1| Aspartate racemase [Bacillus mycoides Rock1-4] gi|228756030|gb|EEM05357.1| Aspartate racemase [Bacillus mycoides Rock1-4] Length = 226 Score = 39.9 bits (93), Expect = 0.41, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 42/143 (29%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 ++ +L+ + ++ ++ NT E S+ L + Sbjct: 56 EEVQNQLVQVAKK-IECSGADCILMCSNT--VHQFAEEVEQAISIPLLHIGDVSAEEIVE 112 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + +Y + I V + I + K Sbjct: 113 HDVKRIGLLGTKQTMEQDFYKTRLANYGVETIIPKEDERNFIHHVILHELSKGIISQQSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 + + I+L CT Sbjct: 173 VRFLQIIQKLIENGAEGILLGCT 195 >gi|147819141|emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera] Length = 330 Score = 39.9 bits (93), Expect = 0.41, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 58/175 (33%), Gaps = 28/175 (16%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--------L 122 L++ V+ C+ + + S S+ FL + + + Sbjct: 158 FLERSGVQCIVMPCH--ISHSWHDEISRGXSVPFLHMGECVARELKNAKLKPLEAGSPLR 215 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYAC-GIKIKEDEIKKE 179 I +L+T ATL + + + + ++M + +E ++ + ++ Sbjct: 216 IGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEALNRKDMEGARNLLRIA 275 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230 ++ + + + ++LA L P +D D++AR Sbjct: 276 LQVLLV----RAVNTVILA-------SDDMHDLLPRDDPLLKKCVDPMDALARST 319 >gi|304439661|ref|ZP_07399563.1| possible aspartate racemase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371841|gb|EFM25445.1| possible aspartate racemase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 235 Score = 39.9 bits (93), Expect = 0.41, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 11/122 (9%) Query: 82 IA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 IA CNT F ++L + F+ + I A +++IL T TL+ Sbjct: 81 IAASCNT-FHNFLEDL-EKLTDIPFINMID-ITTEEAKKHGNVVTILGTKGTLQTGIYDK 137 Query: 140 LIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 I Y + L + +K + + + + +LA Sbjct: 138 YIEKYGLEHLRVDDKIEDELMDIIYYIKSTNDVKSKRLNEICKYYLDQGSIP-----ILA 192 Query: 199 CT 200 CT Sbjct: 193 CT 194 >gi|239501409|ref|ZP_04660719.1| aspartate racemase [Acinetobacter baumannii AB900] Length = 242 Score = 39.9 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 L ++ + V C NT + ++ F+ A + Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179 +++L T T+ + + + + I ++ + S + + C I D K Sbjct: 118 RKVALLGTAFTMEQDFYKARLQDREIEVIIPNDANRKIVHSIIYDELCLGVINPDSQNKY 177 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 E G+ + I+L CT Sbjct: 178 -MTIVEELIGQGAEGIILGCT 197 >gi|229817369|ref|ZP_04447651.1| hypothetical protein BIFANG_02631 [Bifidobacterium angulatum DSM 20098] gi|229785158|gb|EEP21272.1| hypothetical protein BIFANG_02631 [Bifidobacterium angulatum DSM 20098] Length = 241 Score = 39.9 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 37/135 (27%), Gaps = 14/135 (10%) Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYT---QSGLISILSTPA 130 V+ CNTA + + L A+K+ + ++ + L T Sbjct: 76 MGASFIVLTCNTA--HYFHDRFQALTDVPILHMPREAVKRLSQLYPAGRTTRVGFLGTVG 133 Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI-----KKEIEGCFI 185 + + + + L +R+ E+ + + Sbjct: 134 SRASGVYKHAVEE-AGYTFVE--PDDALQARITSLIYDDVKGSGELNLNRYESVLRDMLD 190 Query: 186 EKEGKRTDVIVLACT 200 D ++L CT Sbjct: 191 PAGPCACDALILGCT 205 >gi|193215155|ref|YP_001996354.1| aspartate racemase [Chloroherpeton thalassium ATCC 35110] gi|193088632|gb|ACF13907.1| aspartate racemase [Chloroherpeton thalassium ATCC 35110] Length = 244 Score = 39.9 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 38/141 (26%), Gaps = 6/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 K L I L + C NT + + + L A + + Sbjct: 70 KILSEAAIRIQAAGADFLLI--CTNTMHKVAPEI--DAAIQIPLLHIADATAEVLISSGI 125 Query: 121 GLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 + +L T T+ + + L Y + +V I E K E Sbjct: 126 KSVGLLGTAFTMEQEFYKGRLADKYGLHVLVPNEHDRHFIHKVIYEELCIGKAESHSKAE 185 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 + + +L CT Sbjct: 186 YLRIIESLANQGAEAAILGCT 206 >gi|297743412|emb|CBI36279.3| unnamed protein product [Vitis vinifera] Length = 443 Score = 39.5 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 59/175 (33%), Gaps = 28/175 (16%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--------L 122 L++ V+ C+ + + S S+ FL + + + Sbjct: 269 FLERSGVQCIVMPCH--ISHSWHDEISRGSSVPFLHMGECVARELKNAKLKPLEAGSPLR 326 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYAC-GIKIKEDEIKKE 179 I +L+T ATL + + + + ++M + +E + ++ + ++ Sbjct: 327 IGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEAFNRKDMEGARNLLRIA 386 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230 ++ + + + ++LA L P +D D++AR Sbjct: 387 LQVLLV----RAVNTVILA-------SDDMHDLLPRDDPLLKKCVDPMDALARST 430 >gi|228920937|ref|ZP_04084275.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838726|gb|EEM84029.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 146 Score = 39.5 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 34/102 (33%), Gaps = 4/102 (3%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160 + L A + + +L T T+ + + + I + + + + Sbjct: 13 DIPVLHIADATAKEIKRKDIQKVGLLGTKYTMEQDFYKSRIEENNIKVIVPSEKNRKEIN 72 Query: 161 RV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 +V E G + + ++ + E K I+L CT Sbjct: 73 KVIYTELCLGKIVSQS--REYYKRVIEELVQKGAQGIILGCT 112 >gi|169795477|ref|YP_001713270.1| putative aspartate/glutamate racemase [Acinetobacter baumannii AYE] gi|213158584|ref|YP_002319882.1| aspartate racemase [Acinetobacter baumannii AB0057] gi|215482962|ref|YP_002325167.1| aspartate racemase [Acinetobacter baumannii AB307-0294] gi|301345799|ref|ZP_07226540.1| aspartate racemase [Acinetobacter baumannii AB056] gi|301513552|ref|ZP_07238789.1| aspartate racemase [Acinetobacter baumannii AB058] gi|301597162|ref|ZP_07242170.1| aspartate racemase [Acinetobacter baumannii AB059] gi|332855204|ref|ZP_08435755.1| aspartate racemase [Acinetobacter baumannii 6013150] gi|332872017|ref|ZP_08440404.1| aspartate racemase [Acinetobacter baumannii 6013113] gi|169148404|emb|CAM86269.1| putative Aspartate/Glutamate racemase [Acinetobacter baumannii AYE] gi|213057744|gb|ACJ42646.1| aspartate racemase [Acinetobacter baumannii AB0057] gi|213985943|gb|ACJ56242.1| aspartate racemase [Acinetobacter baumannii AB307-0294] gi|332727581|gb|EGJ59003.1| aspartate racemase [Acinetobacter baumannii 6013150] gi|332731050|gb|EGJ62353.1| aspartate racemase [Acinetobacter baumannii 6013113] Length = 242 Score = 39.5 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 L ++ + V C NT + ++ F+ A + Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179 +++L T T+ + + + + I ++ + S + + C I D K Sbjct: 118 RKVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSIIYDELCLGVINPDSQHKY 177 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 E G+ + I+L CT Sbjct: 178 -TTIVEELIGQGAEGIILGCT 197 >gi|317407387|gb|EFV87351.1| aspartate racemase [Achromobacter xylosoxidans C54] Length = 231 Score = 39.5 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 28/87 (32%) Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L T + + + + L +RV + + E + Sbjct: 122 RRIGLLGTRWLVDSAVYPDKLRARGLDYVRPAPDDRDLLARVIMDELVYGVFKPESVALL 181 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVH 207 +G D +VL CT PL++ Sbjct: 182 QGVVARLRDAGCDAVVLGCTELPLVLD 208 >gi|221214797|ref|ZP_03587766.1| aspartate racemase [Burkholderia multivorans CGD1] gi|221165336|gb|EED97813.1| aspartate racemase [Burkholderia multivorans CGD1] Length = 230 Score = 39.5 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 36/134 (26%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT + ++ FL A +++L Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAITLPFLHIADPTGAALRDAGVERVALLG 124 Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + L + + R+ I E + Sbjct: 125 TRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIVARESRAAYVRIIES 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAQRGAQAVILGCT 198 >gi|262280271|ref|ZP_06058055.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202] gi|262258049|gb|EEY76783.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202] Length = 236 Score = 39.5 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 76/224 (33%), Gaps = 41/224 (18%) Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65 + +I I +GG+ + + K+ P + D P + R Sbjct: 1 MNKAIGI----LGGMGPQATIDAMNKIIKNTPAH-----CDQEHIPVITVSIPDIPDRTQ 51 Query: 66 FLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 + + IL+ Q +I CNTA ++L+ + + + + Sbjct: 52 SIINHDDKPLEKMAEYLKILEAAQVGCIIIPCNTA-HFWFNQLQQRTQTK-MISIIESAV 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE----EYACG 168 +Q + IL+T AT+ ++ S+ + +V +Y G Sbjct: 110 HFIQDSQIAEVCILATSATISTQLYQ---SQFIQNNIRFSTPSVEMQHKVMQSIYQYKAG 166 Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL-IVHVFRQ 211 K ++ E+ + + + + +LACT PL + + Sbjct: 167 NIEKSKQLMSEVIHFYRQNKSIKF---LLACTEIPLILQDSIQD 207 >gi|332186103|ref|ZP_08387849.1| aspartate racemase family protein [Sphingomonas sp. S17] gi|332013918|gb|EGI55977.1| aspartate racemase family protein [Sphingomonas sp. S17] Length = 231 Score = 39.5 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 41/150 (27%), Gaps = 16/150 (10%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 L +R+ + VL + C NT + L A Sbjct: 58 EGLTQRMTDAARRLEAGGAEVLLI--CTNTM--HRMAPAVQAAIGIPLLHIADPTAAAIK 113 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHS------YVSQCHIHLVSSMILASRVEEYACGIK 170 +++L T T+ + + + + I+ + + Sbjct: 114 AAGFQKVALLGTAFTMEHDFYKGRLERQHGLNVIIPDAQDRALVHRIIYDELVAGQINAQ 173 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + ++ I+ E + ++L CT Sbjct: 174 -SREAFRQIIDRMITE----GAEAVILGCT 198 >gi|262039857|ref|ZP_06013130.1| aspartate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330011202|ref|ZP_08307021.1| aspartate racemase [Klebsiella sp. MS 92-3] gi|259042762|gb|EEW43760.1| aspartate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534256|gb|EGF60874.1| aspartate racemase [Klebsiella sp. MS 92-3] Length = 253 Score = 39.5 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 11/142 (7%) Query: 64 LMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 ++ + L + V+ NT A + + FL A +A A Sbjct: 79 ILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARC------QVPFLHIADATGRAIAAKG 132 Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +++L T T+ +T+ L + + I +++ + + + Sbjct: 133 QRRVALLGTRYTMEQTFYRGRLQEQFAIETLIPEADDRAQINQIIFDELCLGTFSEASRD 192 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 + + ++ CT Sbjct: 193 YYLQTIAALAEQGAEGVIFGCT 214 >gi|229091655|ref|ZP_04222856.1| Aspartate racemase [Bacillus cereus Rock3-42] gi|228691600|gb|EEL45352.1| Aspartate racemase [Bacillus cereus Rock3-42] Length = 226 Score = 39.5 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116 K + + ++K ++ NT K+ + S+ +G V A K+ Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNTVHLFAKEV--ESAISIPLLHIGDVSA-KEMVE 112 Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 I +L T T+ + + + + +Y + I V I + Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195 >gi|228958869|ref|ZP_04120575.1| Aspartate racemase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229110094|ref|ZP_04239670.1| Aspartate racemase [Bacillus cereus Rock1-15] gi|229148078|ref|ZP_04276413.1| Aspartate racemase [Bacillus cereus BDRD-ST24] gi|296503209|ref|YP_003664909.1| aspartate racemase [Bacillus thuringiensis BMB171] gi|228635383|gb|EEK91878.1| Aspartate racemase [Bacillus cereus BDRD-ST24] gi|228673286|gb|EEL28554.1| Aspartate racemase [Bacillus cereus Rock1-15] gi|228800806|gb|EEM47717.1| Aspartate racemase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296324261|gb|ADH07189.1| aspartate racemase [Bacillus thuringiensis BMB171] Length = 226 Score = 39.5 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 65/206 (31%), Gaps = 31/206 (15%) Query: 14 NSILIFDSGIGGLI------VLQKMRFL-MPEYH-----FIYVADDVGFPYGNWED---- 57 I + IGGL + + L + +Y +Y D +G Sbjct: 2 KVIGL----IGGLSWESTSLYYKHINTLTLSQYDQNAKLILYSMD-----FGEVTTLLQN 52 Query: 58 ---HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 53 HQYEEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEM 110 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 I +L T T+ + + + + Y + I V I + Sbjct: 111 VEQNI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISE 169 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200 KK + + I+L CT Sbjct: 170 TSKKRLLQITKSLIQNGAEGILLGCT 195 >gi|218234088|ref|YP_002367372.1| aspartate racemase family protein [Bacillus cereus B4264] gi|218162045|gb|ACK62037.1| aspartate racemase family protein [Bacillus cereus B4264] Length = 226 Score = 39.5 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 65/206 (31%), Gaps = 31/206 (15%) Query: 14 NSILIFDSGIGGLI------VLQKMRFL-MPEYH-----FIYVADDVGFPYGNWED---- 57 I + IGGL + + L + +Y +Y D +G Sbjct: 2 KVIGL----IGGLSWESTSLYYKHINTLTLSQYDQNAKLILYSMD-----FGEVTTLLQN 52 Query: 58 ---HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 53 YQYEEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEM 110 Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 I +L T T+ + + + + Y + I V I + Sbjct: 111 VEQNI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISE 169 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200 KK + + I+L CT Sbjct: 170 TSKKRLLQITKSLIQNGAEGILLGCT 195 >gi|121535491|ref|ZP_01667300.1| aspartate racemase [Thermosinus carboxydivorans Nor1] gi|121305910|gb|EAX46843.1| aspartate racemase [Thermosinus carboxydivorans Nor1] Length = 236 Score = 39.5 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 56/168 (33%), Gaps = 14/168 (8%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA----IKQAAAYTQSGLISIL 126 L++ + CNTA ++++ ++ + + I + I +L Sbjct: 69 FLEQAGADFIAMPCNTA-HYWYNDIQQAI-NIPLINMIDLTVDYIADKYPHAAVSPIMLL 126 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T AT++ + + + + S+ + I E+ + + Sbjct: 127 ATAATVKVGLYQQRFAARGMEILVPTAQEQQIISQAIDAVKAGTINENPYLDALRQFMTD 186 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARRA 230 + CT PL+ F ++ D +D + + RRA Sbjct: 187 YSQNGVIAFIAGCTEIPLL---FAHIAG-NFDKIDPTLLLAQEVVRRA 230 >gi|75762859|ref|ZP_00742675.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489652|gb|EAO53052.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 246 Score = 39.5 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 76 EEVKNELVTVAKK-VEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVKQ 133 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + + Y + I + V I + K Sbjct: 134 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVILDELSKGIISEASK 192 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 193 EKLLQITKSLIQNGAEGILLGCT 215 >gi|237709857|ref|ZP_04540338.1| aspartate racemase [Bacteroides sp. 9_1_42FAA] gi|229455950|gb|EEO61671.1| aspartate racemase [Bacteroides sp. 9_1_42FAA] Length = 244 Score = 39.5 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 23/188 (12%), Positives = 50/188 (26%), Gaps = 31/188 (16%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + + + + + L + CNTA +EL + F + + + Sbjct: 61 IEDYVEIGRKMKECGCTKLC-MCCNTA-HYAIEELSEKI-GLPFFNLLDLVALKVKEIRC 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I ++ + + V + V + C K K + Sbjct: 118 TKIGMMCSDGLRKVGIYEERFARLVPNVT-FVYPDREYQDIVTKGICNAKHKIRFTDSSV 176 Query: 181 EGCFIEKE----------GKRTDVIVLACTHYPLIVHVFRQLSP------WPVDWLDN-- 222 E K D IV CT + + ++D+ Sbjct: 177 EPLHPNNLFTSVCSHLINDKNVDCIVGGCT-------DISNVFAFPFSIYEDIKYIDSLD 229 Query: 223 --SDSIAR 228 +++I + Sbjct: 230 ILAEAIVK 237 >gi|302557714|ref|ZP_07310056.1| Asp/Glu racemase [Streptomyces griseoflavus Tu4000] gi|302475332|gb|EFL38425.1| Asp/Glu racemase [Streptomyces griseoflavus Tu4000] Length = 305 Score = 39.5 bits (92), Expect = 0.51, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 64/188 (34%), Gaps = 35/188 (18%) Query: 60 LKKRLMFLFSDILDKYQPVLS--------VIACNTAFTLIKDELRSTFPSMAFLGAVPAI 111 L++R++ L ++D L V+ NTA L ++ L + A+ Sbjct: 56 LRRRMLRLIGHVIDGGAQALLLTCSSYGDVV--NTAHAL---------WNVPVLKSDEAM 104 Query: 112 KQAAAYTQSGLISILS-TPATL--RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168 +AA I +++ TP + L+ + +V++ EE A Sbjct: 105 FRAALSGPYRRIGVVASTPPAVPAAVAQLEALVPEVRPDRPVGIVTA-----LSEEAATA 159 Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL--IVHVFRQLSPWPVDWLDNSDSI 226 + + G D ++LA Y L L V LD + + Sbjct: 160 G--DPGAAARHLADALYATGGAEVDAVLLA--QYSLTPAREALAALLG--VPVLDGAGAA 213 Query: 227 ARRARCLL 234 AR R LL Sbjct: 214 ARELRALL 221 >gi|260774322|ref|ZP_05883237.1| aspartate racemase [Vibrio metschnikovii CIP 69.14] gi|260611283|gb|EEX36487.1| aspartate racemase [Vibrio metschnikovii CIP 69.14] Length = 235 Score = 39.5 bits (92), Expect = 0.53, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 5/118 (4%) Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151 ++ + + F+ A +A + ++ T+ + +++S+ + + Sbjct: 91 MPAMKDKY-DVEFVDIRDATAKAIQSFGLDRVGLIGVQKTMETEFYKGVLNSFSIEAVVP 149 Query: 152 LVSSMILAS--RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 + S V E +DE K E + ++L CT PL+++ Sbjct: 150 KLDSRKYIHQKIVSELVLNKF--KDETKYGFLSVIDELVEQNVQGVILGCTEIPLLLN 205 >gi|15603491|ref|NP_246565.1| hypothetical protein PM1626 [Pasteurella multocida subsp. multocida str. Pm70] gi|12722027|gb|AAK03710.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 230 Score = 39.5 bits (92), Expect = 0.54, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 47/137 (34%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L + ++A NT + + + FL + A +A + Sbjct: 63 ILATAAKKLTQIGAEGILLATNTMHKVAPQII--DVIDVPFLHIIDATAKAIKIKNLTQV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++L T T++ + +L+ + + R+ + + E K+ Sbjct: 121 ALLGTQFTMQDPFYRDLLLHHGITPLVPNQKQQQEIHRIIFTELCVGQIKPESKQFYLDV 180 Query: 184 FIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 181 INDLAKQGAQGVILGCT 197 >gi|294141427|ref|YP_003557405.1| aspartate racemase [Shewanella violacea DSS12] gi|293327896|dbj|BAJ02627.1| aspartate racemase [Shewanella violacea DSS12] Length = 231 Score = 39.5 bits (92), Expect = 0.55, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 5/103 (4%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159 S+ L A + +L T T+ + + L + + + + Sbjct: 98 SIPLLHIADATAHKLIGDGIKTVGLLGTQFTMEQDFYKGRLTEKFAIEVLTPNIRQREVV 157 Query: 160 SRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 V EE GI + + + + ++L CT Sbjct: 158 HSVIYEELCLGIIKSDS--RDAYLAIIEDLYRQGAQAVILGCT 198 >gi|24209687|gb|AAN41452.1| putative aminoacid racemase Orfc372-4 [Vibrio metschnikovii] Length = 235 Score = 39.5 bits (92), Expect = 0.55, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 5/118 (4%) Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151 ++ + + F+ A +A + ++ T+ + +++S+ + + Sbjct: 91 MPAMKDKY-DVEFVDIRDATAKAIQSFGLDRVGLIGVQKTMETEFYKGVLNSFSIEAVVP 149 Query: 152 LVSSMILAS--RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 + S V E +DE K E + ++L CT PL+++ Sbjct: 150 KLDSRKYIHQKIVSELVLNKF--KDETKYGFLSVIDELVEQNVQGVILGCTEIPLLLN 205 >gi|118478023|ref|YP_895174.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam] gi|196043544|ref|ZP_03110782.1| aspartate racemase family protein [Bacillus cereus 03BB108] gi|225864623|ref|YP_002750001.1| aspartate racemase family protein [Bacillus cereus 03BB102] gi|229184870|ref|ZP_04312061.1| Aspartate racemase [Bacillus cereus BGSC 6E1] gi|118417248|gb|ABK85667.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam] gi|196025853|gb|EDX64522.1| aspartate racemase family protein [Bacillus cereus 03BB108] gi|225785651|gb|ACO25868.1| aspartate racemase family protein [Bacillus cereus 03BB102] gi|228598523|gb|EEK56152.1| Aspartate racemase [Bacillus cereus BGSC 6E1] Length = 226 Score = 39.2 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 43/142 (30%), Gaps = 2/142 (1%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 K + + ++K ++ NT + E + S+ L + Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSAKEMVDQ 113 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 I +L T T+ + + + + Y + I V I + K+ Sbjct: 114 NIKRIGLLGTKQTMEQDFYKSRLAHYNIETIIPNEEERNFIHHVILNELSKGIISETSKE 173 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 ++ + I+L CT Sbjct: 174 KLLQITKSLIQNGAEGILLGCT 195 >gi|206560577|ref|YP_002231342.1| putative racemase [Burkholderia cenocepacia J2315] gi|198036619|emb|CAR52516.1| putative racemase [Burkholderia cenocepacia J2315] Length = 230 Score = 39.2 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 37/134 (27%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT + ++ FL A +++L Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGSALRAAGVERVALLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + + L + + R+ + + + Sbjct: 125 TRYTMELPFYAARLREKFGLDVLVPDEPGRDDVHRIIYDELCHGVISAQSRATYVSIIDA 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LATRGAQAVILGCT 198 >gi|224070839|ref|XP_002303258.1| predicted protein [Populus trichocarpa] gi|222840690|gb|EEE78237.1| predicted protein [Populus trichocarpa] Length = 330 Score = 39.2 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 38/115 (33%), Gaps = 16/115 (13%) Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKE 179 I +L++ ATL + + + + + ++M + +E + + Sbjct: 215 RIGLLASNATLAAGFYQEKLQNEGFEVVLPDKATMEHTIIPAIEALDRNDMEGAQNLLRI 274 Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230 + + + ++LA R + P +D D++AR Sbjct: 275 ALQVLL---VRAVNTVILA-------SEEMRDVLPEDDPLLKKCIDPMDALARST 319 >gi|218897646|ref|YP_002446057.1| aspartate racemase family protein [Bacillus cereus G9842] gi|228905578|ref|ZP_04069526.1| Aspartate racemase [Bacillus thuringiensis IBL 4222] gi|218542682|gb|ACK95076.1| aspartate racemase family protein [Bacillus cereus G9842] gi|228854053|gb|EEM98763.1| Aspartate racemase [Bacillus thuringiensis IBL 4222] Length = 226 Score = 39.2 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVKQ 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + + Y + I + V I + K Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVILDELSKGIISEASK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195 >gi|330817679|ref|YP_004361384.1| putative racemase [Burkholderia gladioli BSR3] gi|327370072|gb|AEA61428.1| putative racemase [Burkholderia gladioli BSR3] Length = 230 Score = 39.2 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 36/134 (26%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L + V+ NT + ++ FL A +++L Sbjct: 67 AARQLQAAGADVVVLTTNTM--HRVADAIERALTLPFLHIADPTGTALRAAGVERVALLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + + L + + RV + E + Sbjct: 125 TRYTMELPFYAARLAERFGIEVLTPDAEDRDTVHRVIYEELCHGLIEPASRAAYAAIIGR 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAARGAQAVILGCT 198 >gi|317491295|ref|ZP_07949731.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920842|gb|EFV42165.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 233 Score = 39.2 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 43/141 (30%), Gaps = 6/141 (4%) Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 + L + + V C NT + +++ S + L A Sbjct: 62 ELLADAAQRLQAAGAEGIVV--CTNTMHKVA-EQIESRC-GLPLLHIADATAARIKAQGL 117 Query: 121 GLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179 I +L T T+ + + L + + + S + R+ + E +++ Sbjct: 118 TRIGLLGTRFTMEQDFYRGRLTDKFGIEVIVPNESDREVIHRIIYQELCLGQIRPESRQQ 177 Query: 180 IEGCFIEKEGKRTDVIVLACT 200 + I+L CT Sbjct: 178 YREIMQRLSEQSAQGIILGCT 198 >gi|228965574|ref|ZP_04126656.1| Aspartate racemase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794167|gb|EEM41688.1| Aspartate racemase [Bacillus thuringiensis serovar sotto str. T04001] Length = 226 Score = 39.2 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 11/168 (6%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVKQ 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + + Y + I + V I + K Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVILDELSKGIISEASK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNS 223 +++ + I+L CT PL+ +SP V D + Sbjct: 173 EKLLQITKSLIQNGAEGILLGCTEIPLL------ISPNDLTVPVFDTA 214 >gi|222096164|ref|YP_002530221.1| aspartate racemase [Bacillus cereus Q1] gi|229196823|ref|ZP_04323564.1| Aspartate racemase [Bacillus cereus m1293] gi|221240222|gb|ACM12932.1| aspartate racemase [Bacillus cereus Q1] gi|228586546|gb|EEK44623.1| Aspartate racemase [Bacillus cereus m1293] Length = 226 Score = 39.2 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 7/145 (4%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115 +K L+ + ++K ++ NT + E + S+ +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMV 111 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 I +L T T+ + + + + +Y + I V I + Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELSKGIISET 170 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195 >gi|227818888|ref|YP_002822859.1| hypothetical protein NGR_b06480 [Sinorhizobium fredii NGR234] gi|36959148|gb|AAQ87573.1| Hypothetical protein RNGR00448 [Sinorhizobium fredii NGR234] gi|227337887|gb|ACP22106.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 234 Score = 39.2 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 19/151 (12%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF----LGAV 108 G +++ ++S +D + V T +L + + P + Sbjct: 53 GTLSRQTMRRLATHIWSA-VDAGASAVLV----TCSSLG-PAVDAAMPLCPVPLFRIDDG 106 Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYAC 167 AI+ A + I +L+T AT T+ LI + + V+ + ++ Sbjct: 107 MAIE---AINRGNRIGVLATLATTMEP-TTRLIERHAQRMNRDVSVTGRLCEGAFDKLRN 162 Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 G + D + +E+ + DVIVLA Sbjct: 163 GDRAAHDAMIREVLASLV----NSVDVIVLA 189 >gi|298294028|ref|YP_003695967.1| Asp/Glu/hydantoin racemase [Starkeya novella DSM 506] gi|296930539|gb|ADH91348.1| Asp/Glu/hydantoin racemase [Starkeya novella DSM 506] Length = 229 Score = 39.2 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKED 174 A Q I +L+T +T T+ LI + ++ ++S + A E+ A G + D Sbjct: 110 ALEQGRRIGVLATLSTTLEP-TAALIERHAAEAGRPLTLTSHLCAGAFEKLAQGDRADHD 168 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLA 198 + +E E + D +VLA Sbjct: 169 ALVREG----FEAVAGKVDAVVLA 188 >gi|261251110|ref|ZP_05943684.1| aspartate racemase [Vibrio orientalis CIP 102891] gi|260937983|gb|EEX93971.1| aspartate racemase [Vibrio orientalis CIP 102891] Length = 230 Score = 39.2 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 16/130 (12%), Positives = 37/130 (28%), Gaps = 3/130 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 +++ +IA NT + + S+ L + + +L T T Sbjct: 71 VERAGADFVLIATNTMHKVAEQV--EEAISIPLLHIADTTGEVLVEKGITKVGLLGTAFT 128 Query: 132 LRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + L + + + L V + K + + + Sbjct: 129 MEEAFYKQRLSDKFGIEVVVPNGVQRRLVHDVIYNELCLGKANRRSKDDFHTIISDLAER 188 Query: 191 RTDVIVLACT 200 ++L CT Sbjct: 189 GAQGVILGCT 198 >gi|288933699|ref|YP_003437758.1| aspartate racemase [Klebsiella variicola At-22] gi|290511221|ref|ZP_06550590.1| aspartate racemase [Klebsiella sp. 1_1_55] gi|288888428|gb|ADC56746.1| aspartate racemase [Klebsiella variicola At-22] gi|289776214|gb|EFD84213.1| aspartate racemase [Klebsiella sp. 1_1_55] Length = 237 Score = 39.2 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 45/142 (31%), Gaps = 11/142 (7%) Query: 64 LMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 ++ + L + V+ NT A + + FL A +A A Sbjct: 63 ILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARC------QVPFLHIADATGRAIAAKG 116 Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +++L T T+ +T+ L+ + + I +++ + + + Sbjct: 117 QRRVALLGTRYTMEQTFYRGRLLEQFAIETLIPEADDRARINQIIFDELCLGTFSEASRD 176 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 + + ++ CT Sbjct: 177 YYLQVIAALAEQGAEGVIFGCT 198 >gi|206973563|ref|ZP_03234481.1| aspartate racemase family protein [Bacillus cereus H3081.97] gi|206747719|gb|EDZ59108.1| aspartate racemase family protein [Bacillus cereus H3081.97] Length = 226 Score = 39.2 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 7/145 (4%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115 +K L+ + ++K ++ NT + E + S+ +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMV 111 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 I +L T T+ + + + + +Y + I V I + Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELSKGIISET 170 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195 >gi|240948955|ref|ZP_04753311.1| RacX protein [Actinobacillus minor NM305] gi|240296770|gb|EER47381.1| RacX protein [Actinobacillus minor NM305] Length = 230 Score = 39.2 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 6/131 (4%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ ++A NT + K + S S+ FL + + +++L T T Sbjct: 71 LEQTGVDGILLATNTMHKVAKQIIDS--ISVPFLHILDCVANRIKQQNLTKVALLGTAFT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + + + + R+ EE G + + K Sbjct: 129 MSDNFYRDGLAERGITAIVPEIETQQEIHRIIFEELCVGKILPQS--KAFYLKTIENLTA 186 Query: 190 KRTDVIVLACT 200 + ++L CT Sbjct: 187 LGAEGVILGCT 197 >gi|163732216|ref|ZP_02139662.1| hydantoin racemase [Roseobacter litoralis Och 149] gi|161394514|gb|EDQ18837.1| hydantoin racemase [Roseobacter litoralis Och 149] Length = 227 Score = 39.2 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 10/133 (7%) Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 L +I VIAC D +R+ S+ LG A AA+ + S++ Sbjct: 57 LLEEIARHPDVDAIVIAC--FDDTGLDAVRTQV-SVPVLGIGEAAYHAASMIANK-FSVI 112 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T + +NL+ ++Q + ++ I ++EE G +I+ EI + Sbjct: 113 TTLSRSVPGLENNLMKYGLAQKCARVRATDIPVLKLEE---GDPATLYKIRSEIR---VA 166 Query: 187 KEGKRTDVIVLAC 199 E + IVL C Sbjct: 167 IEQDGAEAIVLGC 179 >gi|161524302|ref|YP_001579314.1| aspartate racemase [Burkholderia multivorans ATCC 17616] gi|189350942|ref|YP_001946570.1| aspartate racemase [Burkholderia multivorans ATCC 17616] gi|160341731|gb|ABX14817.1| aspartate racemase [Burkholderia multivorans ATCC 17616] gi|189334964|dbj|BAG44034.1| aspartate racemase [Burkholderia multivorans ATCC 17616] Length = 230 Score = 39.2 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 36/134 (26%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT + ++ FL A +++L Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGAALRDAGVERVALLG 124 Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + L + + R+ I E + Sbjct: 125 TRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIVARESRAAYVRIIES 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAQRGAQAVILGCT 198 >gi|56790013|dbj|BAD82810.1| monomeric aspartate racemase [Bifidobacterium bifidum] Length = 241 Score = 39.2 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 23/173 (13%) Query: 67 LFSDILDK---YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQ 119 + +D +DK V+ CNTA D +S P + L GAV + + Sbjct: 65 IIADDIDKATAMGASFIVLTCNTA-HYFYDHFQSLTP-VPILHMPRGAVAHMAGQYPKER 122 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-----IKIKED 174 + L T + + + L R+ + Sbjct: 123 FHRVGFLGTMGSRASGVYRQAVEE-AGYTFVE--PDDELQERITSLIYDDVKGTGDLNLQ 179 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226 + ++ R D ++L CT L V + P + +D + ++ Sbjct: 180 RYESVLQAMLDPAGTCRCDTLMLGCT--EL--SVLNEAFPLPQLPIID-AQAV 227 >gi|42781724|ref|NP_978971.1| aspartate racemase family protein [Bacillus cereus ATCC 10987] gi|42737647|gb|AAS41579.1| aspartate racemase family protein [Bacillus cereus ATCC 10987] Length = 226 Score = 39.2 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 7/145 (4%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115 +K L+ + ++K ++ NT + E + S+ +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMV 111 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 I +L T T+ + + + + +Y + I V I + Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANYSIETIIPNKEERNFIHHVILNELSKGIISET 170 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195 >gi|332716803|ref|YP_004444269.1| Aspartate racemase [Agrobacterium sp. H13-3] gi|325063488|gb|ADY67178.1| Aspartate racemase [Agrobacterium sp. H13-3] Length = 237 Score = 39.2 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 34/121 (28%), Gaps = 3/121 (2%) Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 V+ C NT + E + + + A +L+T T+ + ++ Sbjct: 79 VLICTNTM--HLVAETVEKMSGVTLIDIIDETATALKADGRRKPLLLATRYTMEHGFYTD 136 Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 + + + + + ++ + D ++L C Sbjct: 137 RMRRHGVDVVVPDEEDRAAIHDIIFGELCQGEIKSCSRERYMSVIEKARALGVDSVILGC 196 Query: 200 T 200 T Sbjct: 197 T 197 >gi|152971773|ref|YP_001336882.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956622|gb|ABR78652.1| putative aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 237 Score = 39.2 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 11/142 (7%) Query: 64 LMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 ++ + L + V+ NT A + + FL A +A A Sbjct: 63 ILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARC------QVPFLHIADATGRAIAAKG 116 Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +++L T T+ +T+ L + + I +++ + + + Sbjct: 117 QRRVALLGTRYTMEQTFYRGRLQEQFAIETLIPEADDRAQINQIIFDELCLGTFSEASRD 176 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 + + ++ CT Sbjct: 177 YYLQTIAALAEQGAEGVIFGCT 198 >gi|289523633|ref|ZP_06440487.1| aspartate racemase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503325|gb|EFD24489.1| aspartate racemase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 250 Score = 39.2 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 38/116 (32%), Gaps = 18/116 (15%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G L + L L S L I CNTA D++ + P + V A Sbjct: 74 GEDPSPYLLEGLRKLASW-----GADLLAIPCNTA-HYFIDKMEADLP-KPLIHIVEATL 126 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSN---------LIHSYVSQCHIHLVSSMILA 159 + SG +L+T T++ L+ SQ I + + L Sbjct: 127 EETKRRTSGGAWLLATSGTIKTELYQKHAPRMGVQLLLPEKSSQEQI--QNCIELV 180 >gi|283786541|ref|YP_003366406.1| Asp/Glu/Hydantoin racemase [Citrobacter rodentium ICC168] gi|282949995|emb|CBG89623.1| putative Asp/Glu/Hydantoin racemase [Citrobacter rodentium ICC168] Length = 230 Score = 39.2 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 41/136 (30%), Gaps = 27/136 (19%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160 S+ FL A +A A +++L T T+ + + Q I L Sbjct: 98 SLPFLHIADATGRAIAARGMKRVALLGTRYTMEQDFYR---GRLAQQFAIES-----LVP 149 Query: 161 RVEEYACGIKIKEDEI---------KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211 E+ A +I DE+ ++ + ++ CT Sbjct: 150 EAEDRATINQIIFDELCLGQFSEASRRYYVDVIERLAAEGAQGVIFGCT-------EIGL 202 Query: 212 LSP---WPVDWLDNSD 224 L P P+ D + Sbjct: 203 LVPAQSSPIPVFDTAA 218 >gi|217960099|ref|YP_002338657.1| aspartate racemase family protein [Bacillus cereus AH187] gi|229139289|ref|ZP_04267861.1| Aspartate racemase [Bacillus cereus BDRD-ST26] gi|217065312|gb|ACJ79562.1| aspartate racemase family protein [Bacillus cereus AH187] gi|228644145|gb|EEL00405.1| Aspartate racemase [Bacillus cereus BDRD-ST26] Length = 226 Score = 39.2 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 7/145 (4%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115 +K L+ + ++K ++ NT + E + S+ +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMV 111 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 I +L T T+ + + + + +Y + I V I + Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELSKGIISET 170 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 K+++ + I+L CT Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195 >gi|332520393|ref|ZP_08396855.1| aspartate racemase [Lacinutrix algicola 5H-3-7-4] gi|332043746|gb|EGI79941.1| aspartate racemase [Lacinutrix algicola 5H-3-7-4] Length = 250 Score = 39.2 bits (91), Expect = 0.69, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 51/151 (33%), Gaps = 19/151 (12%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 + + + ++ + I CNTA I + + P L V I++ + + Sbjct: 67 IAEIIASLIASGS-SIIGIPCNTAHAKPILSLIEKSIPESCVL--VNLIEEVGLHISTKH 123 Query: 123 -----ISILSTPATLRRTYTSNLIHSYVSQCHIHLVS---SMILA-SRVEEYACGIKIKE 173 + +L T T+ ++ Y + S + + + + GIK Sbjct: 124 PEITKVGVLGTTGTILAKVYPEVLSKYN--IEVIQPSEDIQDLFVHPSIYDTSYGIKAFS 181 Query: 174 DEIKKEIEGCFIE----KEGKRTDVIVLACT 200 + + ++ + K ++L CT Sbjct: 182 NPVNEKAKENLSMAATYLSRKGAQAVILGCT 212 >gi|145629156|ref|ZP_01784955.1| glutamate racemase [Haemophilus influenzae 22.1-21] gi|144978659|gb|EDJ88382.1| glutamate racemase [Haemophilus influenzae 22.1-21] Length = 60 Score = 39.2 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 221 DNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271 D S +IA+R + LL N + + P+ + ++ + +G +S Sbjct: 2 DPSAAIAKRIKYLLDDKNLQVQNEKYNQMFCTAHFPEESQFKKALHLWGFES 53 >gi|291326871|ref|ZP_06126146.2| putative aspartate racemase [Providencia rettgeri DSM 1131] gi|291312313|gb|EFE52766.1| putative aspartate racemase [Providencia rettgeri DSM 1131] Length = 155 Score = 39.2 bits (91), Expect = 0.71, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 10/72 (13%) Query: 72 LDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 L+ VI CNTA EL+ +K+ T+ I +L+ Sbjct: 89 LENAGAECIVIPCNTAHFWFS-----ELKEVCHVDMLSIVETTMKE-VLVTKKKNIGLLA 142 Query: 128 TPATLRRTYTSN 139 T AT+ Sbjct: 143 TNATMYMGLYQK 154 >gi|228965192|ref|ZP_04126286.1| hypothetical protein bthur0004_20290 [Bacillus thuringiensis serovar sotto str. T04001] gi|228794426|gb|EEM41938.1| hypothetical protein bthur0004_20290 [Bacillus thuringiensis serovar sotto str. T04001] Length = 157 Score = 39.2 bits (91), Expect = 0.73, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 2/81 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L K +I NT ++ ++++ + L A +A + +L T T Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKAIKRKDIQKVGLLGTTYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHL 152 + + + + I + + Sbjct: 129 MEQDFYKSRIEENNIKVIVPS 149 >gi|237745210|ref|ZP_04575691.1| aspartate racemase [Fusobacterium sp. 7_1] gi|256026686|ref|ZP_05440520.1| aspartate racemase [Fusobacterium sp. D11] gi|289764682|ref|ZP_06524060.1| aspartate racemase [Fusobacterium sp. D11] gi|229432439|gb|EEO42651.1| aspartate racemase [Fusobacterium sp. 7_1] gi|289716237|gb|EFD80249.1| aspartate racemase [Fusobacterium sp. D11] Length = 231 Score = 38.8 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K VI NT ++ + + L I +L T T Sbjct: 71 LEKAGADFIVICTNTMHKVVSGI--KKYTKLPILHIAEMTAIELKKAGIKKIGLLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 +++ + ++ + I + + + V + + E K E + Sbjct: 129 MQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIFNELCLGKIKKESKDEYLRIIRDLSKAG 188 Query: 192 TDVIVLACT 200 ++L CT Sbjct: 189 AKGVILGCT 197 >gi|238788708|ref|ZP_04632500.1| Aspartate racemase [Yersinia frederiksenii ATCC 33641] gi|238723303|gb|EEQ14951.1| Aspartate racemase [Yersinia frederiksenii ATCC 33641] Length = 232 Score = 38.8 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 3/130 (2%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + + V+ NT + D T + L A I +L T T Sbjct: 71 LKRAGAEVIVVCTNTMHKVADDI--ETASGLPLLHIADATATQIKRQGISKIGLLGTRYT 128 Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190 + + + L+ + + + +R+ + I + ++E + E + Sbjct: 129 MEQDFYRGRLMEKHDIDVITPDSADREIINRIIYEELCLGIISENSRQEYRRIMGKLEQQ 188 Query: 191 RTDVIVLACT 200 I+ CT Sbjct: 189 GVQGIIFGCT 198 >gi|313139820|ref|ZP_07802013.1| monomeric aspartate racemase [Bifidobacterium bifidum NCIMB 41171] gi|313132330|gb|EFR49947.1| monomeric aspartate racemase [Bifidobacterium bifidum NCIMB 41171] Length = 241 Score = 38.8 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 23/173 (13%) Query: 67 LFSDILDK---YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQ 119 + +D +DK V+ CNTA D +S P + L GAV + + Sbjct: 65 IIADDIDKATAMGASFIVLTCNTA-HYFYDHFQSLTP-VPILHMPRGAVAHMAGQYPKER 122 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-----IKIKED 174 + L T + + + L R+ + Sbjct: 123 FHRVGFLGTMGSRASGVYRQAVEE-AGYTFVE--PDDELQERITSLIYDDVKGTGDLNLQ 179 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226 + ++ R D ++L CT L V + P + +D + ++ Sbjct: 180 RYESVLQAMLDPAGTCRCDTLMLGCT--EL--SVLNEAFPLPQLPIID-AQAV 227 >gi|186471587|ref|YP_001862905.1| Asp/Glu/hydantoin racemase [Burkholderia phymatum STM815] gi|184197896|gb|ACC75859.1| Asp/Glu/hydantoin racemase [Burkholderia phymatum STM815] Length = 219 Score = 38.8 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 27/179 (15%) Query: 31 KMRFLMPEYHFI------YVAD--DVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82 ++ +PE I +AD G+ + R+ S+ + + + Sbjct: 20 QINEQIPEARVINIIDDSLLADVRTA----GHLTPE-VASRIHSYMSNAQAMH-VDIILN 73 Query: 83 ACNTAFTL--IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140 AC ++ D +R F + + A+ + A+ + + +++T +T T L Sbjct: 74 AC---SSVGEAVDSVR-KFVTTPIVKIDEAMAEEAS-SIGPRVGVVATVSTTLEP-TVRL 127 Query: 141 IHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 I + V+ I E G K DEI K E + DV+VLA Sbjct: 128 IKRKAGELGRTIEVTERIAEGAFEALLSGDATKHDEIVKNAISALAE----QVDVVVLA 182 >gi|323142707|ref|ZP_08077424.1| aspartate racemase [Succinatimonas hippei YIT 12066] gi|322417502|gb|EFY08119.1| aspartate racemase [Succinatimonas hippei YIT 12066] Length = 229 Score = 38.8 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 2/129 (1%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K I NT + +++S ++ L A +++L T T Sbjct: 71 LEKAGADFIAICTNTMHKVA-PQIQSCI-TIPILHIADATADELIKANIKTVALLGTKYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 + + + + I+ + I + + + V I ++ ++E + K Sbjct: 129 MTQDFYKSRINDKNIKVLIPEEKDIEIVNHVIYDELCRGIISEKSRQEYVRIISSLQQKG 188 Query: 192 TDVIVLACT 200 ++L CT Sbjct: 189 AQGVILGCT 197 >gi|303325617|ref|ZP_07356060.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3] gi|302863533|gb|EFL86464.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3] Length = 230 Score = 38.8 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 52/148 (35%), Gaps = 5/148 (3%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+W+ AL L+ + L+K VI NT + +++ S+ L Sbjct: 55 GDWDRSAL---LLGAAAQNLEKGGADFIVICTNTMHKVA-HRIQAAV-SIPLLHIADVTA 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 + +L T T+ + + + I + ++V + + Sbjct: 110 AEILGRGLRSVGLLGTRYTMEEDFYCGRLRRQGLEVLIPDAPERDMINKVIFEELCLGVI 169 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200 ++ +K+ + G+ ++L CT Sbjct: 170 REDSRKKFQAAMAGLAGRGARGVILGCT 197 >gi|301128206|ref|XP_002999330.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262111417|gb|EEY69469.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 269 Score = 38.8 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 6/93 (6%) Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIH-SYVSQCHIH-LVSSMILASRVEEYACGIKI 171 A + ++ST T +L+ + ++ V L + G+K Sbjct: 171 ANKLPSCKRVGLMSTTGTRNSRVYHDLMEPRGYTVVEVYAGVMQQELHESIYIREWGVKS 230 Query: 172 KEDEI----KKEIEGCFIEKEGKRTDVIVLACT 200 + + + + +VI+L CT Sbjct: 231 TAPSVSSRSEANFHRYALHLREQGAEVIILGCT 263 >gi|224282662|ref|ZP_03645984.1| aspartate racemase [Bifidobacterium bifidum NCIMB 41171] gi|311063986|ref|YP_003970711.1| aspartate racemase [Bifidobacterium bifidum PRL2010] gi|310866305|gb|ADP35674.1| Aspartate racemase [Bifidobacterium bifidum PRL2010] Length = 230 Score = 38.8 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 23/173 (13%) Query: 67 LFSDILDK---YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQ 119 + +D +DK V+ CNTA D +S P + L GAV + + Sbjct: 54 IIADDIDKATAMGASFIVLTCNTA-HYFYDHFQSLTP-VPILHMPRGAVAHMAGQYPKER 111 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-----IKIKED 174 + L T + + + L R+ + Sbjct: 112 FHRVGFLGTMGSRASGVYRQAVEE-AGYTFVE--PDDELQERITSLIYDDVKGTGDLNLQ 168 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226 + ++ R D ++L CT L V + P + +D + ++ Sbjct: 169 RYESVLQAMLDPAGTCRCDTLMLGCT--EL--SVLNEAFPLPQLPIID-AQAV 216 >gi|260432707|ref|ZP_05786678.1| Asp/Glu/Hydantoin racemase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416535|gb|EEX09794.1| Asp/Glu/Hydantoin racemase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 246 Score = 38.8 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 17/174 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ +IA NT +R +M L A A T + +L T T Sbjct: 81 LEQAGCDFGIIASNTP-HARLHAIRQGV-TMPILSIFDATAVATKTTGAKSALVLGTSVT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSS--MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 ++ + + + + + L + + ++ G + + + Sbjct: 139 MQARHYAERLAAEGITANDRLPEDQIAEMQAMIDTEFYGG--ASAKARGRLLAFCNRHAA 196 Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDS-IARRARCLLPR 236 T I+LACT PL F Q PV +++ S + +A + L Sbjct: 197 PGT-AILLACTELPL---AFPQHLDDPVFETDGHLFVNPSAAHVAAALKEALSE 246 >gi|52142858|ref|YP_083972.1| aspartate racemase [Bacillus cereus E33L] gi|51976327|gb|AAU17877.1| aspartate racemase [Bacillus cereus E33L] Length = 226 Score = 38.8 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT + E + S+ L + Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSAKEMVE 112 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + + +Y + I V I + K Sbjct: 113 QDIKRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELSKGIISETSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195 >gi|30020750|ref|NP_832381.1| aspartate racemase [Bacillus cereus ATCC 14579] gi|229130822|ref|ZP_04259771.1| Aspartate racemase [Bacillus cereus BDRD-Cer4] gi|29896302|gb|AAP09582.1| Aspartate racemase [Bacillus cereus ATCC 14579] gi|228652627|gb|EEL08516.1| Aspartate racemase [Bacillus cereus BDRD-Cer4] Length = 226 Score = 38.8 bits (90), Expect = 0.87, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 48/143 (33%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKKMVEQN 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + I +L T T+ + + + + Y + I V I + K Sbjct: 115 IK--RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISETSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 + + + I+L CT Sbjct: 173 ERLLQITKSLIQNGAEGILLGCT 195 >gi|294648484|ref|ZP_06725962.1| hydantoin racemase [Acinetobacter haemolyticus ATCC 19194] gi|292825625|gb|EFF84350.1| hydantoin racemase [Acinetobacter haemolyticus ATCC 19194] Length = 232 Score = 38.8 bits (90), Expect = 0.93, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 48/149 (32%), Gaps = 22/149 (14%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 D A+ + Q +IAC D R +G A A Sbjct: 49 DEAIASFHLLELIKQGQSQQVDGHIIAC--FGDPGLDAARE-LTDAPVIGIAEAAFHMAT 105 Query: 117 YTQSGLISILSTP----ATLRRTYT--SNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 +++T TL+RT +L+H Y + + L K Sbjct: 106 --------LIATKFSIVTTLKRTKIIAEHLLHQYGYIHKCEKIHCIDLPVL-----DLEK 152 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199 +++ K +E C++ KE IVL C Sbjct: 153 NEKETYDKLLETCWLAKENDGVGAIVLGC 181 >gi|226938988|ref|YP_002794059.1| Aspartate racemase [Laribacter hongkongensis HLHK9] gi|226713912|gb|ACO73050.1| Aspartate racemase [Laribacter hongkongensis HLHK9] Length = 229 Score = 38.4 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 L+ L+ V+ NT + +++ + FL A A + Sbjct: 63 LLARACRQLEAAGADAVVLCTNTMHKVA-PAMQAA-TDLPFLHIGDATAAAIRAAGLDCV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 +L T T+ + + + + + + R+ + + Sbjct: 121 GLLGTRFTMEQDFYRARLEARGIRVLVPEADDRATVHRIIYDELCLGDIRPASRTAYLDI 180 Query: 184 FIEKEGKRTDVIVLACT 200 +VL CT Sbjct: 181 IGRLAAAGAQGVVLGCT 197 >gi|330828408|ref|YP_004391360.1| amino acid recemase [Aeromonas veronii B565] gi|328803544|gb|AEB48743.1| Amino acid recemase, putative [Aeromonas veronii B565] Length = 232 Score = 38.4 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 22/174 (12%), Positives = 43/174 (24%), Gaps = 16/174 (9%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+W RL+ + L +I NT + + + L A Sbjct: 55 GDWPA---TARLLAAEARKLQAGGADFLLIGTNTMHKVAPEI--EAAIDIPLLHIADATA 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 + +L T T+ + + L + + + R+ + Sbjct: 110 AKLRADGITRVGLLGTRFTMEQDFYKGRLQERFGLAVLVPDEAGRERVHRIIYDELCLGE 169 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222 + E + ++L CT L V D Sbjct: 170 IRASSRAEYLAIIEGLAAAGAEAVILGCT-------EIALLVGDARAAVPLYDT 216 >gi|310287122|ref|YP_003938380.1| aspartate racemase [Bifidobacterium bifidum S17] gi|309251058|gb|ADO52806.1| aspartate racemase [Bifidobacterium bifidum S17] Length = 241 Score = 38.4 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 23/173 (13%) Query: 67 LFSDILDK---YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQ 119 + +D +DK V+ CNTA D +S P + L GAV + + Sbjct: 65 IIADDIDKATAMGASFIVLTCNTA-HYFYDHFQSLTP-VPILHMPRGAVAHMAGQYPKER 122 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-----IKIKED 174 + L T + + + L R+ + Sbjct: 123 FHRVGFLGTMGSRASGVYRQAVEE-AGYTFVE--PDDELQERITSLIYDDVKGTGDLNLQ 179 Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226 + ++ R D ++L CT L V + P + +D + ++ Sbjct: 180 RYESVLQSMLDPAGTCRCDTLMLGCT--EL--SVLNEAFPLPQLPIID-AQAV 227 >gi|110678210|ref|YP_681217.1| hydantoin racemase [Roseobacter denitrificans OCh 114] gi|109454326|gb|ABG30531.1| hydantoin racemase [Roseobacter denitrificans OCh 114] Length = 227 Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 12/134 (8%) Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 L +++ V+AC D +R T + LG A AA+ + S++ Sbjct: 57 LLAEVALHKDVDAIVVAC--FDDTGVDAVR-TLVDVPVLGIGEAAYHAASMIANK-FSVI 112 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-EDEIKKEIEGCFI 185 +T + +NL+ ++Q + ++ I ++EE K + EI++ I Sbjct: 113 TTLSRSVPGLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIKSEIREAIAA--- 169 Query: 186 EKEGKRTDVIVLAC 199 + IVL C Sbjct: 170 ----DNAEAIVLGC 179 >gi|90408560|ref|ZP_01216716.1| hypothetical protein PCNPT3_05976 [Psychromonas sp. CNPT3] gi|90310314|gb|EAS38443.1| hypothetical protein PCNPT3_05976 [Psychromonas sp. CNPT3] Length = 229 Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 37/140 (26%), Gaps = 3/140 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + + +I NT + + L A Sbjct: 61 AKILIEGAKSVQAAGADFLLICTNTMHKVAPQI--EAAIDIPLLHIADATADVLVKKGIK 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 + +L T T+ + + + + + + + V + K E Sbjct: 119 KVGLLGTAFTMEQDFYKGRLQNNSGLTVIVPDEADRKIVHNVIYKELCLGKAMPASKIEY 178 Query: 181 EGCFIEKEGKRTDVIVLACT 200 + + ++L CT Sbjct: 179 LRIIESLAAQGAEAVILGCT 198 >gi|324326620|gb|ADY21880.1| putative racemase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 226 Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 42/142 (29%), Gaps = 2/142 (1%) Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118 K + + ++K ++ NT + E S+ L + Sbjct: 56 EEVKNALVTVAKKVEKSGAECLLMCSNT--VHLFAEEVENAISIPLLHIGDVSAKEMVDQ 113 Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 I +L T T+ + + + + Y + I V I + K+ Sbjct: 114 NIKRIGLLGTKQTMEQDFYKSRLAHYNIETIIPNEEERNFIHHVILNELSKGIISETSKE 173 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 ++ + I+L CT Sbjct: 174 KLLQITKSLIQNGAEGILLGCT 195 >gi|332304391|ref|YP_004432242.1| aspartate racemase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171720|gb|AEE20974.1| aspartate racemase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 230 Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 5/131 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L+K +I NT + E+ ++ S+ L + + +L T T Sbjct: 71 LEKAGADFLLICTNTMHKVA-PEITASI-SVPVLHIADTTAEVLQQENISRVGLLGTAFT 128 Query: 132 LRRT-YTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 + ++ YTS L + + + + + + + C KIK++ KK + Sbjct: 129 MEQSFYTSRLTNKFGIEVITPNADDRAVVHNIIYQELCKGKIKDESRKKYL-NIISALAA 187 Query: 190 KRTDVIVLACT 200 ++L CT Sbjct: 188 DGCQGVILGCT 198 >gi|319443219|ref|ZP_07992375.1| aspartate racemase [Corynebacterium variabile DSM 44702] Length = 241 Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 11/118 (9%) Query: 90 LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCH 149 ++ D L P + + AV A++ A +G + +L T T+ T+ + Sbjct: 88 IVFDRLVEASP-VPLVSAVDAVRDEAVARGTGKVLLLGTGFTM-SPETNGFFTRPFTDAG 145 Query: 150 IHLVSSMILASRVEEYACGI--KIKEDEIKKEIEGCFIEK-----EGKRTDVIVLACT 200 + +V + A+ +EE I +++ + E F+ + D +VL CT Sbjct: 146 VEVV--LPDAAEIEEVQHRIATELELGVVTDETRDRFVGIIDRVHRAEGVDQVVLGCT 201 >gi|222082429|ref|YP_002541794.1| hydantoin racemase protein [Agrobacterium radiobacter K84] gi|221727108|gb|ACM30197.1| hydantoin racemase protein [Agrobacterium radiobacter K84] Length = 243 Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 33/153 (21%) Query: 92 KDELRSTFPSMAFLG-----AVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146 + R+ F + LG V A A +T + T R NL+ Y Sbjct: 82 LEAARA-FSDVPVLGLCESAVVTAGFLAQRFT-------IVTTLERSRVLIDNLVRHYGM 133 Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC------T 200 + +S I +E+ A +++ EIE + + IVL C T Sbjct: 134 GGRAKVRASDIAVLELEDGA---PEAIGKLRAEIERAL---DEDGAEAIVLGCAGMADLT 187 Query: 201 HYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 +++ V +D + ++A L Sbjct: 188 ------RELQEIYG--VPVIDGVAAAVKQAEAL 212 >gi|227530282|ref|ZP_03960331.1| aspartate racemase [Lactobacillus vaginalis ATCC 49540] gi|227349805|gb|EEJ40096.1| aspartate racemase [Lactobacillus vaginalis ATCC 49540] Length = 224 Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 51/144 (35%), Gaps = 4/144 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 + + +++L ++ NT L+ D++++ ++ L V AA Sbjct: 44 EKIAGYVGAAANNLLKAG-CDFGLMCGNTP-HLLFDKIQAR-TDLSLLSIVETAVAAAQQ 100 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEI 176 +++L T T++ + C I+ ++ + +K++ Sbjct: 101 LHLQRLALLGTKFTMQNDFFIKPFREAGIEVCRPSENDQPIIHQKIVDKLENGIVKKETK 160 Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200 ++ + + D VL CT Sbjct: 161 QQLMTIINKMVQKDHLDGAVLGCT 184 >gi|254508322|ref|ZP_05120444.1| aspartate racemase [Vibrio parahaemolyticus 16] gi|219548736|gb|EED25739.1| aspartate racemase [Vibrio parahaemolyticus 16] Length = 232 Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 44/149 (29%), Gaps = 6/149 (4%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G W+ A+ ++ + L+K +IA NT L S+ L A Sbjct: 55 GAWDSAAV---VLCKAAQSLEKAGADFILIATNTMHKLAGQI--EESISIPLLHIADATG 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKI 171 + +L T T+ + I + + + + L V Sbjct: 110 HELTRRGISKVGLLGTAFTMEEDFYKQRITNKFGIEVIVPNGVQRKLVHDVIYDELCQGK 169 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 K + + E ++L CT Sbjct: 170 LNRRSKHDYQTIIEELAMNGAQGVILGCT 198 >gi|221198449|ref|ZP_03571495.1| aspartate racemase [Burkholderia multivorans CGD2M] gi|221208602|ref|ZP_03581603.1| aspartate racemase [Burkholderia multivorans CGD2] gi|221171593|gb|EEE04039.1| aspartate racemase [Burkholderia multivorans CGD2] gi|221182381|gb|EEE14782.1| aspartate racemase [Burkholderia multivorans CGD2M] Length = 230 Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 36/134 (26%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT + ++ FL A +++L Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGAALRDAGVERVALLG 124 Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + L + + R+ I E + Sbjct: 125 TRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIVARESRGTYVRIIES 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAQRGAQAVILGCT 198 >gi|197120977|ref|YP_002132928.1| aspartate racemase [Anaeromyxobacter sp. K] gi|196170826|gb|ACG71799.1| aspartate racemase [Anaeromyxobacter sp. K] Length = 234 Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 9/132 (6%) Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151 LR P + V A + ++ ++ T T+ + + + + + + Sbjct: 91 LPALRPRSP-LPIADLVGATCEDVRAAGHRVVGLVGTRFTVSEPFFRDALEAAGVRVVVP 149 Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIVHVFR 210 + + K ++ E+ + D +V+ACT Sbjct: 150 DEAGTDDLDALIFGPLARGEKTPAMQGELAAIVSRMARREPLDALVVACT-------DLM 202 Query: 211 QLSPWPVDWLDN 222 L V LD Sbjct: 203 DLMGTEVPLLDP 214 >gi|291008730|ref|ZP_06566703.1| putative aspartate/glutamate racemase [Saccharopolyspora erythraea NRRL 2338] Length = 231 Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 2/133 (1%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + ++ L V+ NT + D++ + + L A ++ +L Sbjct: 67 AAKQIETAGADLLVLCTNTMHKVA-DQIEAAI-EIPLLHLADTTATAVTAAGLQVVGLLG 124 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + + + + + + L V I + + Sbjct: 125 TAFTMEQDFYRDRLSGHRLTVLVPEREDRALVHSVIYDELCRGIVSETSRAAYRRVIDRL 184 Query: 188 EGKRTDVIVLACT 200 +VL CT Sbjct: 185 VAAGAQGVVLGCT 197 >gi|254247766|ref|ZP_04941087.1| Aspartate racemase [Burkholderia cenocepacia PC184] gi|124872542|gb|EAY64258.1| Aspartate racemase [Burkholderia cenocepacia PC184] Length = 230 Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT + ++ FL A +++L Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGSALRAAGVERVALLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + + L + + R+ + +E + Sbjct: 125 TRYTMELPFYAARLREKFGLDVLVPDERGRDDVHRIIYDELCHGVISEESRSTYVSIIDG 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAQRGAQAVILGCT 198 >gi|229161526|ref|ZP_04289506.1| Aspartate racemase [Bacillus cereus R309803] gi|228621771|gb|EEK78617.1| Aspartate racemase [Bacillus cereus R309803] Length = 226 Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT + E + S+ L + Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSAKEMVE 112 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + ++ + +Y + I V I + K Sbjct: 113 QDIKRIGLLGTKQTMEQDFYTSRLANYNIETIIPNKEERNFIHHVILNELSKGIISEASK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195 >gi|228921319|ref|ZP_04084644.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838333|gb|EEM83649.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 226 Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + + Y + I V I + K Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISETSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195 >gi|297184446|gb|ADI20561.1| hypothetical protein [uncultured alpha proteobacterium EB080_L84F03] Length = 227 Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 10/123 (8%) Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136 VIAC D +R T ++ LG A AA+ + S+++T + Sbjct: 67 VDAIVIAC--FDDTGVDAVR-TLVNIPVLGIGEAAYHAASMIANK-FSVITTLSRSVPGL 122 Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196 +NL+ ++Q + ++ I ++EE K +K EI + T+ IV Sbjct: 123 ENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFK---VKSEIRESIAQ---DNTEAIV 176 Query: 197 LAC 199 L C Sbjct: 177 LGC 179 >gi|223039044|ref|ZP_03609335.1| aspartate racemase subfamily [Campylobacter rectus RM3267] gi|222879683|gb|EEF14773.1| aspartate racemase subfamily [Campylobacter rectus RM3267] Length = 229 Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 2/132 (1%) Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + IL I NT D ++S S+ + A + + + +L T Sbjct: 68 ARILQGGGCDFIFICTNTM-HKCFDAVQSAV-SVPVVHIAQATLKRLLASGVQRVGLLGT 125 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T++ ++ + I M + + V + + K++ + Sbjct: 126 IYTMKESFYKETLQKGGVNVLIPNAEDMRMINDVIFKELCLGKISPDSKRDFLRVIDKMA 185 Query: 189 GKRTDVIVLACT 200 +L CT Sbjct: 186 DAGAQGAILGCT 197 >gi|228939755|ref|ZP_04102335.1| Aspartate racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972637|ref|ZP_04133239.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228979226|ref|ZP_04139567.1| Aspartate racemase [Bacillus thuringiensis Bt407] gi|228780502|gb|EEM28728.1| Aspartate racemase [Bacillus thuringiensis Bt407] gi|228787078|gb|EEM35055.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819914|gb|EEM65959.1| Aspartate racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326940403|gb|AEA16299.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43] Length = 226 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + + Y + I V I + K Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISETSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195 >gi|86151206|ref|ZP_01069421.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|315123688|ref|YP_004065692.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841553|gb|EAQ58800.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|315017410|gb|ADT65503.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 230 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 13/145 (8%) Query: 65 MFLFSDILDKYQPVLSVIACN----TAFTL--IKDELRSTFPSMAFLGAVPAIKQAAAYT 118 + IL + L + N T T+ + DE++ ++ L V + +A Sbjct: 57 WQEAAQILTQCAKKLELAGANFIIITTNTMHKVFDEIQQNI-NIPILHIVKSSAKALKQE 115 Query: 119 QSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + LI +S I+ + C KIK+D + Sbjct: 116 NIQKIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDIIFNELCKGKIKQDSKE 175 Query: 178 KE--IEGCFIEKEGKRTDVIVLACT 200 K I EK K +LACT Sbjct: 176 KYLNIINKLQEKGAKGA---LLACT 197 >gi|107028677|ref|YP_625772.1| aspartate racemase [Burkholderia cenocepacia AU 1054] gi|116690164|ref|YP_835787.1| aspartate racemase [Burkholderia cenocepacia HI2424] gi|105897841|gb|ABF80799.1| Aspartate racemase [Burkholderia cenocepacia AU 1054] gi|116648253|gb|ABK08894.1| aspartate racemase [Burkholderia cenocepacia HI2424] Length = 230 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT + ++ FL A +++L Sbjct: 67 AARRLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGSALRAAGVERVALLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + + L + + R+ + +E + Sbjct: 125 TRYTMELPFYAARLREKFGLDVLVPDERGRDDVHRIIYDELCHGVISEESRATYVSIIDG 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAQRGAQAVILGCT 198 >gi|134099495|ref|YP_001105156.1| putative aspartate/glutamate racemase [Saccharopolyspora erythraea NRRL 2338] gi|133912118|emb|CAM02231.1| putative aspartate/glutamate racemase [Saccharopolyspora erythraea NRRL 2338] Length = 222 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 2/133 (1%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + ++ L V+ NT + D++ + + L A ++ +L Sbjct: 58 AAKQIETAGADLLVLCTNTMHKVA-DQIEAAI-EIPLLHLADTTATAVTAAGLQVVGLLG 115 Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T T+ + + + + + + L V I + + Sbjct: 116 TAFTMEQDFYRDRLSGHRLTVLVPEREDRALVHSVIYDELCRGIVSETSRAAYRRVIDRL 175 Query: 188 EGKRTDVIVLACT 200 +VL CT Sbjct: 176 VAAGAQGVVLGCT 188 >gi|170693200|ref|ZP_02884360.1| Asp/Glu/hydantoin racemase [Burkholderia graminis C4D1M] gi|170141730|gb|EDT09898.1| Asp/Glu/hydantoin racemase [Burkholderia graminis C4D1M] Length = 218 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 51/150 (34%), Gaps = 17/150 (11%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTL--IKDELRSTFPSMAFLGAVPA 110 G+ ++ ++ + + + + AC ++ D LR + Sbjct: 46 GHLTPEVTRRLYSYMANA--EALGADIILNAC---SSVGEATDLLRGMIRTPIVKVDEAM 100 Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACG 168 +A A + +++T +T T LI I + + + E G Sbjct: 101 ADEACAL--GPRVGVVATVSTTLEP-TVRLIRRKAVERGVEIEVTECIAQGAF-EALLAG 156 Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 K D+I K I + + DVIVLA Sbjct: 157 DAAKHDDILKRA----IIELAGQVDVIVLA 182 >gi|206972488|ref|ZP_03233433.1| aspartate racemase family protein [Bacillus cereus AH1134] gi|229178917|ref|ZP_04306276.1| Aspartate racemase [Bacillus cereus 172560W] gi|206732648|gb|EDZ49825.1| aspartate racemase family protein [Bacillus cereus AH1134] gi|228604570|gb|EEK62032.1| Aspartate racemase [Bacillus cereus 172560W] Length = 226 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + + Y + I V I + K Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISETSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195 >gi|297844444|ref|XP_002890103.1| aspartate-glutamate racemase family [Arabidopsis lyrata subsp. lyrata] gi|297335945|gb|EFH66362.1| aspartate-glutamate racemase family [Arabidopsis lyrata subsp. lyrata] Length = 330 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEE-YACGIKIKEDEIKK 178 + +++T ATL + + S + + ++M + +E ++ + ++ Sbjct: 217 RVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKREDMEGARNLLRI 276 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230 ++ ++ V++L R L P +D D++AR A Sbjct: 277 ALQVLLVQAVN----VVMLG-------SDEMRDLLPGDDPLLKKCVDPMDALARSA 321 >gi|239616913|ref|YP_002940235.1| aspartate racemase [Kosmotoga olearia TBF 19.5.1] gi|239505744|gb|ACR79231.1| aspartate racemase [Kosmotoga olearia TBF 19.5.1] Length = 230 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 45/148 (30%), Gaps = 10/148 (6%) Query: 85 NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144 NT D + P + +L + A + IL T + + + Sbjct: 85 NTI-HHAFDLVVEKSP-IPWLHIAEEVAAEAKRKNYKCLGILGTRFLMESPVYPAKLDAA 142 Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204 I + + + E + + + + D +VL CT PL Sbjct: 143 GIGYRIPETKNRERINEIIFNELVYGRFYPESRAYFNEVIGKLKDQGCDAVVLGCTEIPL 202 Query: 205 IVHVFRQLSPWPVDW--LDNSDSIARRA 230 + + P LD++ +AR A Sbjct: 203 L------VIPEESPLPTLDSTRILARAA 224 >gi|311278211|ref|YP_003940442.1| aspartate racemase [Enterobacter cloacae SCF1] gi|308747406|gb|ADO47158.1| aspartate racemase [Enterobacter cloacae SCF1] Length = 230 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 55/167 (32%), Gaps = 15/167 (8%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122 +++ + L++ V+ NT + + + + FL A +A A Sbjct: 62 QILAEAAAGLERIGAEGIVLCTNTMHKVAQQI--ESRCRVPFLHIADATGRAIARQGIRN 119 Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS--MILASRVEEYACGIKIKEDEIKKEI 180 +++L T T+ + + + S + + L + + C + E + + Sbjct: 120 VALLGTRYTMEQDFYRGRLERQFSLTTLIPEADDRAKLNQIIFDELCQGQFSEASRRDYL 179 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSD 224 + + + ++ CT L P PV D + Sbjct: 180 QAI-DRLVAQGAEGVIFGCT-------EIGLLVPAERCPVPVFDTAA 218 >gi|229190733|ref|ZP_04317728.1| Aspartate racemase [Bacillus cereus ATCC 10876] gi|228592758|gb|EEK50582.1| Aspartate racemase [Bacillus cereus ATCC 10876] Length = 226 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + + Y + I V I + K Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISETSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195 >gi|254251950|ref|ZP_04945268.1| Aspartate racemase [Burkholderia dolosa AUO158] gi|124894559|gb|EAY68439.1| Aspartate racemase [Burkholderia dolosa AUO158] Length = 230 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 37/134 (27%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT + ++ FL A G +++L Sbjct: 67 AARRLEAAGAELVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGAALRDAGIGRVALLG 124 Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + L + R+ I E E + Sbjct: 125 TRYTMELPFYAQRLRDKFDIDVLTPDERQRDDVHRIIYDELCHGIVEAESRATYVRIIES 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LAQRGAQAVILGCT 198 >gi|110678174|ref|YP_681181.1| aspartate racemase [Roseobacter denitrificans OCh 114] gi|109454290|gb|ABG30495.1| aspartate racemase, probable [Roseobacter denitrificans OCh 114] Length = 237 Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 17/148 (11%) Query: 81 VIA--CNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134 V+A CNTA T I+D + + +M L A QAA + G++ IL++PAT Sbjct: 81 VLAMPCNTAHLYATQIEDAVGISLLNMPKL----ACAQAAQGMKRGGIVGILASPATNSS 136 Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 N + + Q ILAS G + + + + + +R Sbjct: 137 GLFGNFLARHEVQSAFPENEDGILASIRRIKKSGPTQTDITLLEREAASLVRRGAER--- 193 Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDN 222 +++ C+ + L+ R PV LD Sbjct: 194 VIIGCSEFSLVSERIR----CPVPILDT 217 >gi|225572754|ref|ZP_03781509.1| hypothetical protein RUMHYD_00944 [Blautia hydrogenotrophica DSM 10507] gi|225039893|gb|EEG50139.1| hypothetical protein RUMHYD_00944 [Blautia hydrogenotrophica DSM 10507] Length = 143 Score = 38.0 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 2/90 (2%) Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113 +H + R + L++ ++ NT ++++ S+ L A+ + Sbjct: 53 ERGEHEILCRKLTEVCQSLERAGADCVLLCTNTMHAFA-EQIQECL-SVPLLHIADAVGE 110 Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHS 143 I ++ TP T+ + N + Sbjct: 111 EIQEKGLDTIGLMGTPFTMEMPFYKNRLEE 140 >gi|260654210|ref|ZP_05859700.1| Na/Pi-cotransporter family protein [Jonquetella anthropi E3_33 E1] gi|260630843|gb|EEX49037.1| Na/Pi-cotransporter family protein [Jonquetella anthropi E3_33 E1] Length = 543 Score = 38.0 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 50/159 (31%), Gaps = 29/159 (18%) Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++L++ A R + L H + +V + E I + I ++I Sbjct: 223 AVLASLAASREAKQAALGHVLNKLIGVLIV--LPFLPAAEHL---IGLTSHSIGRQIANA 277 Query: 184 FIEKEGKRTDVIVLACTHYPLIVHV---FRQLSPWPVDWL--------------DNSDSI 226 ++L +P I + +++ P + + ++ Sbjct: 278 HTLFNLAN--TVIL----FPFITPLTRFIQKVLPAEPRLVYSGPQFLDNRLLESSPAAAV 331 Query: 227 ARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQ 265 A + L R+ + DD L + A R+ Q Sbjct: 332 A-ATKQELLRMGRFALSMLDDSRSALLERQKDAAERVAQ 369 >gi|300770584|ref|ZP_07080463.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33861] gi|300763060|gb|EFK59877.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33861] Length = 247 Score = 38.0 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 60/183 (32%), Gaps = 20/183 (10%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTL-----IKDELRSTFPSMAFL-GAVPAIKQAA 115 + L++ + I C+TA + I+ EL+ + L A Sbjct: 60 AYAIAEIISELEQSGATVVGIPCHTAHAVPIFDIIRYELQKKEHKVRLLHMVEETSDYIA 119 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--- 172 A+ + ++ IL+T +++ + +++ + Sbjct: 120 AHFTAPVVGILTTTGIRNTGLYNHVFA--AKGLKVI-QPPEEWQEKIQAAIHDEQYGIKA 176 Query: 173 -----EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 + K+E+ E + + VI+L CT + R+ + +D + +A Sbjct: 177 SSSPVTNRAKEELVAAIHELKKEGATVIILGCT---ELSGALREKEISGLPLVDPNRILA 233 Query: 228 RRA 230 R Sbjct: 234 RAL 236 >gi|260906284|ref|ZP_05914606.1| aspartate racemase [Brevibacterium linens BL2] Length = 230 Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 47/140 (33%), Gaps = 11/140 (7%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160 + + V +I A +++L T T+ + + + S + + + I Sbjct: 98 DVPLIHIVDSIATVAKSQGYSTLAVLGTKWTMLDDFYTGRLESQGIRTLVPDEDTCIEVD 157 Query: 161 RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD-- 218 ++ + DE + + + + D + L+CT L P Sbjct: 158 QIIFDELTQGVFTDESRARYAEIMNDLKARGADAVALSCT-------EIGLLVPPETAPL 210 Query: 219 -WLDNSDS-IARRARCLLPR 236 +D+ D+ +A ++ Sbjct: 211 PAIDSVDAHVAAIVEWMIAE 230 >gi|294787311|ref|ZP_06752564.1| aspartate racemase [Parascardovia denticolens F0305] gi|315227130|ref|ZP_07868917.1| aspartate racemase [Parascardovia denticolens DSM 10105] gi|294484667|gb|EFG32302.1| aspartate racemase [Parascardovia denticolens F0305] gi|315119580|gb|EFT82713.1| aspartate racemase [Parascardovia denticolens DSM 10105] Length = 241 Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 56/174 (32%), Gaps = 26/174 (14%) Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132 V+ CNTA D ++ P F A+ + ++ + + ++T + Sbjct: 77 GASFIVLTCNTA-HYFYDRFQALTPVPIFHMPRRAVSRMSSLYPAARCPRVGFMATEGSR 135 Query: 133 RRTYTSNLIHSYV-----SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 + I + + + ++ V K+ E ++ Sbjct: 136 KAGVYQKEIEAAGYTYVEPDEDLQRQINALIYQDV---KGSGKLDEGRYLAAMQAFLNPH 192 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI--------ARRARC 232 R DV++L CT L V + P + +D + ++ AR R Sbjct: 193 GPYRCDVVLLGCT--EL--SVLNEAFPQPDLPLID-AQAVLVEDTVAAARALRR 241 >gi|229103249|ref|ZP_04233932.1| Aspartate racemase [Bacillus cereus Rock3-28] gi|228680088|gb|EEL34282.1| Aspartate racemase [Bacillus cereus Rock3-28] Length = 227 Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 50/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 57 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEIVEQ 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + ++ + Y + I V I + + Sbjct: 115 NI-KRIGLLGTKQTMEQDFYTSRLAKYNIETLIPNDEERTFIHHVILNELSRGIISETSR 173 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 174 EKLIQITNSLIQNGAEGILLGCT 196 >gi|78042937|ref|YP_360172.1| hydantoin racemase [Carboxydothermus hydrogenoformans Z-2901] gi|77995052|gb|ABB13951.1| hydantoin racemase [Carboxydothermus hydrogenoformans Z-2901] Length = 242 Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 71/227 (31%), Gaps = 50/227 (22%) Query: 31 KMRFLMPEYHFIYVA-----DDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVL------ 79 ++R YV D YG + M + DIL+K + Sbjct: 17 EIREEFKH----YVGPHDSFDVENLDYGPASIESEFDEAMAI-PDILNKVKKAQEDGFDG 71 Query: 80 SVIAC------NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATL 132 +I C N A R G PA++ A ++ G++++L P + Sbjct: 72 VIIDCFGDPGVNAA--------RELVDIPVCGGFEPAMQIALGLGKNIGIVTVL--PNVV 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 +LI + + + + K ED + + Sbjct: 122 S--MLQDLIAKMGIEKRVKSI---RYVNIPVLDLGDKKKLEDALFN---QSLEAIKNDHV 173 Query: 193 DVIVLACT------HYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 V+VL CT H L+ + + + + V +D + S A + Sbjct: 174 QVVVLGCTGMMGMAH-NLMKRL--KEAGYDVPVVDPAFSAAMMVKNY 217 >gi|87122402|ref|ZP_01078283.1| hypothetical protein MED121_00595 [Marinomonas sp. MED121] gi|86162377|gb|EAQ63661.1| hypothetical protein MED121_00595 [Marinomonas sp. MED121] Length = 230 Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 55/149 (36%), Gaps = 6/149 (4%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112 G+W+ +++ + L+K +I NT + +++++ ++ L A Sbjct: 55 GDWDKA---AKILTNAAKSLEKAGVDFILIGTNTMHKVA-NQIKANI-NVPLLHIAHATG 109 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKI 171 + + +++L T T+ + + + + ++ + + + + + Sbjct: 110 ERLIADKIEKVALLGTAFTMEQAFYKDTLSKAFGLEVLVPQAGDAQIIHNIIYQELCLGK 169 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 +E KK + ++L CT Sbjct: 170 CLEESKKAYLDIISRLVEEGAQGVILGCT 198 >gi|238751301|ref|ZP_04612795.1| Aspartate racemase [Yersinia rohdei ATCC 43380] gi|238710575|gb|EEQ02799.1| Aspartate racemase [Yersinia rohdei ATCC 43380] Length = 233 Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 13/135 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + + V+ NT + D + L A I +L T T Sbjct: 71 LKRAGAEVIVVCTNTMHKVADDI--EAACGLPLLHIADATAAQIKQQGINKIGLLGTRYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV------EEYACGIKIKEDEIKKEIEGCFI 185 + + + Q I +++ + + EE GI + ++E Sbjct: 129 MEQDFYRG---RLAEQHDIEVITPDSIDREIINRIIYEELCLGIITETS--RQEYRRIIG 183 Query: 186 EKEGKRTDVIVLACT 200 + E + I+ CT Sbjct: 184 KLEQQGVQGIIFGCT 198 >gi|229075088|ref|ZP_04208089.1| Aspartate racemase [Bacillus cereus Rock4-18] gi|228708019|gb|EEL60191.1| Aspartate racemase [Bacillus cereus Rock4-18] Length = 227 Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 50/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 57 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I ++ T T+ + + ++ + Y + I V I + + Sbjct: 115 NI-KRIGLIGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGIISETSR 173 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 174 EKLIQITNSLIQNGAEGILLGCT 196 >gi|159044742|ref|YP_001533536.1| aspartate/glutamate racemase family protein [Dinoroseobacter shibae DFL 12] gi|157912502|gb|ABV93935.1| aspartate/glutamate racemase family protein [Dinoroseobacter shibae DFL 12] Length = 229 Score = 37.6 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 2/132 (1%) Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + L++ + ++A NT L + + L A QA +++T Sbjct: 68 AQALERGGAGILLLATNTMHKLADRMMEGV--GIPLLHIADATAQAILQAGLRRPGLMAT 125 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 T+ + + + + + + S RV I+ + + Sbjct: 126 AFTMEQQFYTGRLRAAGLDPVLPDPSDRATTHRVIYDELCKDIRTERSETAFVQIAGRLA 185 Query: 189 GKRTDVIVLACT 200 D ++L CT Sbjct: 186 DGGADCLILGCT 197 >gi|260654243|ref|ZP_05859733.1| aspartate racemase [Jonquetella anthropi E3_33 E1] gi|260630876|gb|EEX49070.1| aspartate racemase [Jonquetella anthropi E3_33 E1] Length = 242 Score = 37.6 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 3/85 (3%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + + L ++ + + CNTA D R P + +A + + Sbjct: 79 LKAGLETLCRWGADILAVPCNTA-HCFIDRFREELPKPLIHIVEATVSRALEVSPACW-- 135 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCH 149 +++T ATL +Q Sbjct: 136 LVATGATLASGIYEKEGERQGAQFF 160 >gi|45357972|ref|NP_987529.1| glucose-methanol-choline oxidoreductase [Methanococcus maripaludis S2] gi|44920729|emb|CAF29965.1| conserved hypothetical archaeal protein [Methanococcus maripaludis S2] Length = 386 Score = 37.6 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 15/26 (57%) Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHF 41 I++ SG+GG V ++++ P + Sbjct: 4 IIVIGSGVGGSTVFKELKEAFPNQNI 29 >gi|50286077|ref|XP_445467.1| hypothetical protein [Candida glabrata CBS 138] gi|49524772|emb|CAG58378.1| unnamed protein product [Candida glabrata] Length = 230 Score = 37.6 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 57/156 (36%), Gaps = 12/156 (7%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 + + L + L K V+ NT ++ ++++ + L V A+ Sbjct: 58 DDVAEYLAHAACN-LQKAGADFGVMCGNTP-HIVFEKIQGK-TDLPLLSMVQCSLDVASA 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 +++L T T++ + + I+ S + + + G +++ + Sbjct: 115 MGLKRLALLGTKFTMQNDFFKRPFEM--AGISIYT-PSPVEQETIHQKIVG-ELENGIVT 170 Query: 178 KEIEGCFI-----EKEGKRTDVIVLACTHYPLIVHV 208 + + + + D ++L CT PLI++ Sbjct: 171 PDTKSTLLTIINGMIKEHGLDGVILGCTELPLILNQ 206 >gi|238787933|ref|ZP_04631729.1| Serine/threonine dehydratase family protein [Yersinia frederiksenii ATCC 33641] gi|238723881|gb|EEQ15525.1| Serine/threonine dehydratase family protein [Yersinia frederiksenii ATCC 33641] Length = 323 Score = 37.6 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 95 LRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPATLRRTYTSNLIHSY 144 ++ +P+ +G PA + +SG + ++TPAT+ + + Y Sbjct: 193 AKALYPNCQVIGVEPAAGNDGQLSFRSGKVVKIATPATIADGAQTQALGHY 243 >gi|255262038|ref|ZP_05341380.1| hydantoin racemase [Thalassiobium sp. R2A62] gi|255104373|gb|EET47047.1| hydantoin racemase [Thalassiobium sp. R2A62] Length = 227 Score = 37.6 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 10/133 (7%) Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126 L +++ VIAC D +R T + LG A AA+ + S++ Sbjct: 57 LLAEVAKHPDVDAIVIAC--FDDTGVDAVR-TLVDVPVLGIGEAAYHAASMIANK-FSVI 112 Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 +T + +NL+ ++Q + ++ I ++EE K IK EI + Sbjct: 113 TTLSRSVPGLENNLMLYGLAQKCARVRATDIPVLKLEEGDPATLFK---IKSEIRESIAQ 169 Query: 187 KEGKRTDVIVLAC 199 T+ IVL C Sbjct: 170 ---DNTEAIVLGC 179 >gi|114706117|ref|ZP_01439020.1| hypothetical protein FP2506_16664 [Fulvimarina pelagi HTCC2506] gi|114538963|gb|EAU42084.1| hypothetical protein FP2506_16664 [Fulvimarina pelagi HTCC2506] Length = 438 Score = 37.6 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 8/53 (15%) Query: 165 YACGIKIKEDEIKKEIEGCFIEKEG---KRTDVIVLACT----HYPLIVHVFR 210 + +E + E++G + + K D I+L CT HYP + R Sbjct: 221 FHFPDNWEEKPLLTEVDGNTAKFKDGTTKHIDAIIL-CTGYLHHYPFLEDDLR 272 >gi|228945845|ref|ZP_04108189.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229121780|ref|ZP_04251001.1| Aspartate racemase [Bacillus cereus 95/8201] gi|228661696|gb|EEL17315.1| Aspartate racemase [Bacillus cereus 95/8201] gi|228813827|gb|EEM60104.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 147 Score = 37.6 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 7/113 (6%) Query: 91 IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHI 150 + ++++ + L A + + +L T T+ + + + I + + Sbjct: 4 VVEKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYTMEQDFYKSRIEENHIKVVV 62 Query: 151 HLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 + V E I + E K + I++ + +L CT Sbjct: 63 PSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEGAQGI---ILGCT 112 >gi|242808240|ref|XP_002485122.1| lipase 1 precursor, putative [Talaromyces stipitatus ATCC 10500] gi|218715747|gb|EED15169.1| lipase 1 precursor, putative [Talaromyces stipitatus ATCC 10500] Length = 481 Score = 37.6 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 43/147 (29%), Gaps = 18/147 (12%) Query: 122 LISILSTPA-TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I + ++ + + L SY + I V+ L + V + E I Sbjct: 197 KIGLWGYSGGSIASEFAAELRASYAPEIQIAGVAIGGLPTPVTAVL--DSVNETPYAGLI 254 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 +P++ V + + A R +L + Sbjct: 255 VSGLWGYANA-----------FPIVESYLLSRLTDEVK--SSGNFTAGRNMNILEIFAVY 301 Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267 D + F+ G+ DI L+Q F Sbjct: 302 AD--VDVFSYFVGGEDDIFSSPLLQYF 326 >gi|210635501|ref|ZP_03298582.1| hypothetical protein COLSTE_02521 [Collinsella stercoris DSM 13279] gi|210158356|gb|EEA89327.1| hypothetical protein COLSTE_02521 [Collinsella stercoris DSM 13279] Length = 238 Score = 37.6 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 21/140 (15%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILST 128 L+ I CNTA E + + L + AY + I +L+T Sbjct: 72 WLEDAGADYIAIPCNTA--HFFYEQINAVAHVPVLNIMRETTSRIVEAYGEHATIGLLAT 129 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-CGIKIKEDEIKK-------EI 180 TL N Y+S+ + +V+ E+ A + + D IK+ E+ Sbjct: 130 DGTLTSGVFQN----YLSEAGLSVVAPSD-----EDQAKTVMPLIYDRIKRNLPYDPAEL 180 Query: 181 EGCFIEKEGKRTDVIVLACT 200 D +++ CT Sbjct: 181 LDLARRMHENGCDAVIVGCT 200 >gi|320106695|ref|YP_004182285.1| regulatory protein IclR [Terriglobus saanensis SP1PR4] gi|319925216|gb|ADV82291.1| regulatory protein IclR [Terriglobus saanensis SP1PR4] Length = 362 Score = 37.6 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Query: 61 KKRLMFLFSDILDKYQPV--LSVIACNTAFTL-IKDELRS--TFPSMAFLGAVPAIKQAA 115 +++ + +D L+++ + + A N L D +R +A +G AI +A Sbjct: 247 REKSRKVVADFLNRHPKDKGVLIAAANDTSALGALDAVRELKREKQVAIVG-QDAIPEAV 305 Query: 116 AYTQSGLISILSTPATLRRTYTSNLIH 142 A +++ T + Y + LIH Sbjct: 306 AEIAKNKSALIGTVSHEAAGYGTRLIH 332 >gi|93004852|ref|YP_579289.1| aspartate racemase [Psychrobacter cryohalolentis K5] gi|92392530|gb|ABE73805.1| Aspartate racemase [Psychrobacter cryohalolentis K5] Length = 239 Score = 37.6 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 6/123 (4%) Query: 80 SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139 +IA NT + + ++ + A I++L T T+ + Sbjct: 84 LLIATNTMHKVAEQV--QVATNLPLIHIADTTADAIKQQGLTKIALLGTQFTMTEDFYKQ 141 Query: 140 LIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 + Q I + + R+ +E G + ++ E + + +L Sbjct: 142 CLMDAGLQVLIPDTDARVEVHRIIYDELCQGQLLASS--RQYYTQVINELAAQGAEGAIL 199 Query: 198 ACT 200 CT Sbjct: 200 GCT 202 >gi|71726058|gb|AAZ39181.1| probable aspartate/glutamate racemase [Janthinobacterium lividum] Length = 230 Score = 37.6 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 42/145 (28%), Gaps = 11/145 (7%) Query: 60 LKKRLMFLFSDILDKYQPVLSVIAC--NTA-FTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 + + ++ + L C NT RS P + V A + AA Sbjct: 60 VAELMLASARKLAAAGADFLI---CPDNTIHQAFELMAPRSPLPWLHIADVV-ASEAAAR 115 Query: 117 YTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 + + + T + L ++ + + E +K D Sbjct: 116 GVR--RVGLTGTRWLVDSAVYPDRLAARGIACVRPGEDERSEINRIIMEKLVPGVVKGDS 173 Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200 + + + + D ++L CT Sbjct: 174 VARF-QAVIASLREQGCDAVILGCT 197 >gi|284054142|ref|ZP_06384352.1| aspartate racemase [Arthrospira platensis str. Paraca] Length = 262 Score = 37.6 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 26/169 (15%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILS 127 IL+ VI CNT + +L + ++ ++ + A + + + IL+ Sbjct: 80 QILEVAGADFLVITCNT--SHGFYDLVQSQLNIPWIHIMQATVRFIKLHYPELNRVGILA 137 Query: 128 TPATLRRTYTSNLIHS---------YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 T TL+ + + + S+ ++++ I A G++I I Sbjct: 138 TNGTLQAHLYQDSLTAAGLTAIAPILNSELQQDIMNA-IYHPIWGIKATGVQILPPPI-N 195 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 ++ E + D+++ CT + LD S IA Sbjct: 196 ILKTAVKWLENQGADLLIAGCT-------EISVVL----KLLDTSSLIA 233 >gi|54026948|ref|YP_121190.1| hypothetical protein nfa49740 [Nocardia farcinica IFM 10152] gi|54018456|dbj|BAD59826.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 441 Score = 37.6 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 205 IVHVFRQLSPW-PVDWLDNSDS-IARRARCLLPRINTH--QTRVFDDHALFLSGKPDIAM 260 + V +L P PV W+D+ D+ A LL RI H + RVFD HA L G+P + Sbjct: 210 LTAVLARLVPEAPVTWVDSPDAITAAEIEALLTRIPAHSRRGRVFDAHAPLLRGQPSLLT 269 Query: 261 R 261 Sbjct: 270 E 270 >gi|238791924|ref|ZP_04635560.1| Aspartate racemase [Yersinia intermedia ATCC 29909] gi|238728555|gb|EEQ20073.1| Aspartate racemase [Yersinia intermedia ATCC 29909] Length = 231 Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 38/131 (29%), Gaps = 5/131 (3%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + V+ NT + D + L A I +L T T Sbjct: 71 LKNAGADVIVVCTNTMHKVADDI--EAASGLPLLHIADATAAQIKQQGINKIGLLGTRYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSS--MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189 + + + + + S +R+ + + + ++E + E Sbjct: 129 MEQDFYRGRLTEK-HGLEVITPDSIDRESVNRIIYEELCLGVISETSRQEYRRIMGKLEQ 187 Query: 190 KRTDVIVLACT 200 + I+ CT Sbjct: 188 QGVQGIIFGCT 198 >gi|311105568|ref|YP_003978421.1| aspartate racemase family protein 1 [Achromobacter xylosoxidans A8] gi|310760257|gb|ADP15706.1| aspartate racemase family protein 1 [Achromobacter xylosoxidans A8] Length = 234 Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 4/110 (3%) Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I IL T + + + + ++ Q +RV + + + E + Sbjct: 121 RRIGILGTRWLVDSSVYPDQLEAHGLQWLRPSEEDRDTLARVIMDELVLGVFKPESVARL 180 Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 + D +VL CT PL+++ P LD++ +AR A Sbjct: 181 QAVIERLRHAGCDAVVLGCTELPLVLNDGNAALPT----LDSTRILARAA 226 >gi|291520435|emb|CBK75656.1| aspartate racemase [Butyrivibrio fibrisolvens 16/4] Length = 239 Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 14/134 (10%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSG--LISILST 128 L++ + C TA + IK+AA Y ++ G + I++T Sbjct: 72 LERQNVDYIAMPCITA-----HFFHDQLADSVMIPVSNGIKEAAQYLSERGISKVGIMAT 126 Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIE 186 T ++ Y +C + + ++ G + D ++ Sbjct: 127 DGTASMHLFDSVFKDYDIKCIYPDAAGQKAVMSIIYDDVKAGQPVNMDAFEQVKNQLL-- 184 Query: 187 KEGKRTDVIVLACT 200 V++L CT Sbjct: 185 --DAGAQVVILGCT 196 >gi|157148393|ref|YP_001455712.1| putative racemase [Citrobacter koseri ATCC BAA-895] gi|157085598|gb|ABV15276.1| hypothetical protein CKO_04217 [Citrobacter koseri ATCC BAA-895] Length = 230 Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 46/138 (33%), Gaps = 3/138 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L + V+ NT + D + S S+ FL A +A A + Sbjct: 63 ILAQAALGLQQAGAEAIVLCTNTMHKVA-DTIESRC-SLPFLHIADATGRAIARKNMTRV 120 Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182 ++L T T+ + + L + + + +++ + + ++ Sbjct: 121 ALLGTRYTMEQDFYRGRLEQRFAIETLVPETDDRAQINQIIFDELCLGEFSERSRQYYLQ 180 Query: 183 CFIEKEGKRTDVIVLACT 200 + ++ CT Sbjct: 181 VIERLAAQGAQGVIFGCT 198 >gi|323467192|gb|ADX70879.1| Aspartate racemase [Lactobacillus helveticus H10] Length = 249 Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 9/121 (7%) Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQSGLISILSTPATLRRTYTSNLI 141 CNTA DEL + + FL + K Y + +++T ++R I Sbjct: 84 CNTA-HYWYDEL-AALSDVPFLNMMEIAVHKFVDDYPDEKNLGLIATEGSIRDGLYVKYI 141 Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD--VIVLAC 199 ++ + V + G ++ ++ E+ + + V++L C Sbjct: 142 KKVN---KTPVLGGPEIQLMVNQLIYGDIKEKGKVDPELFHHILTLMHDKYGCKVVLLGC 198 Query: 200 T 200 T Sbjct: 199 T 199 >gi|238896363|ref|YP_002921099.1| putative racemase [Klebsiella pneumoniae NTUH-K2044] gi|238548681|dbj|BAH65032.1| putative aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 237 Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 11/142 (7%) Query: 64 LMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 ++ + L + V+ NT A + + FL A +A A Sbjct: 63 ILAEAAVGLQQAGAEGIVLCTNTMHKVADVIAARC------QVPFLHIADATGRAIAAKG 116 Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +++L T T+ +T+ L + + I +++ + + + Sbjct: 117 QRRVALLGTRYTMEQTFYRGRLQEQFAIETLIPEADDRAQINQIIFDELCLGTFSEASRD 176 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 + + ++ CT Sbjct: 177 YYLQTIAALAEQGAEGVIFGCT 198 >gi|148926885|ref|ZP_01810563.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni CG8486] gi|145844462|gb|EDK21570.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni CG8486] Length = 193 Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 3/120 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +IA NT + DE++ ++ L + +A Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 I +L T T+ + + LI +S I+ + C +IK+D +K + Sbjct: 119 KIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDIIFNELCKGEIKQDSKEKYL 178 >gi|257440518|ref|ZP_05616273.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165] gi|257197022|gb|EEU95306.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165] Length = 503 Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 1/94 (1%) Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 +G + +K T++G +S+ +T TL L + + + Sbjct: 116 VGDIIGVKGEVFRTKTGELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDLIAN 175 Query: 165 YAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +K +I KEI EK D +L Sbjct: 176 PEVKDTFVKRSQILKEIRAYLDEKGFLEVDTPIL 209 >gi|229116159|ref|ZP_04245550.1| Aspartate racemase [Bacillus cereus Rock1-3] gi|228667276|gb|EEL22727.1| Aspartate racemase [Bacillus cereus Rock1-3] Length = 227 Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 50/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 57 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + ++ + Y + I V I + + Sbjct: 115 NI-KRIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGIISETSR 173 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 174 EKLIQITNSLIQNGAEGILLGCT 196 >gi|15218160|ref|NP_172993.1| aspartate-glutamate racemase family [Arabidopsis thaliana] gi|5103839|gb|AAD39669.1|AC007591_34 Is a member of the PF|01177 Aspartate-glutamate racemase family. EST gb|T43554 comes from this gene [Arabidopsis thaliana] gi|26983862|gb|AAN86183.1| unknown protein [Arabidopsis thaliana] gi|332191198|gb|AEE29319.1| aspartate-glutamate racemase-like protein [Arabidopsis thaliana] Length = 330 Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEE-YACGIKIKEDEIKK 178 + +++T ATL + + S + + ++M + +E ++ + ++ Sbjct: 217 RVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKRKDMEGARNLLRI 276 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230 ++ ++ V++L R L P +D D++AR A Sbjct: 277 ALQVLLVQAVN----VVMLG-------SDEMRDLLPGDDPLLKKCVDPMDALARSA 321 >gi|313115333|ref|ZP_07800808.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622364|gb|EFQ05844.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 503 Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 1/94 (1%) Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 +G + +K T++G +S+ +T TL L + + + Sbjct: 116 VGDIIGVKGEVFRTKTGELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDLIAN 175 Query: 165 YAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 +K +I KEI EK D +L Sbjct: 176 PEVKDTFVKRSQILKEIRAYLDEKGFLEVDTPIL 209 >gi|303244614|ref|ZP_07330947.1| Creatininase [Methanothermococcus okinawensis IH1] gi|302485040|gb|EFL47971.1| Creatininase [Methanothermococcus okinawensis IH1] Length = 227 Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 45/141 (31%), Gaps = 21/141 (14%) Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIAC---NTAFTLIKDELRSTFPSMAFLGAVPAIK 112 + + + L ++ ++ +I C NT + + ++L + + L + Sbjct: 78 KPEEVIEYLKYIINEGKKLGVKKFLIINCHGGNTLISNLLNDLENQYSVRIILKNITFTH 137 Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 A G + ++ + + + + + + + E I Sbjct: 138 AATEELSVGSVIGIA-----------DEAENRLKEHDFNKYPEIGMVGLKEAREQNKYID 186 Query: 173 EDEIKKEIEGCFIEKEGKRTD 193 E E F+EK G + D Sbjct: 187 E-------EAKFVEKHGVKID 200 >gi|227539078|ref|ZP_03969127.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33300] gi|227241082|gb|EEI91097.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33300] Length = 248 Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 66/181 (36%), Gaps = 27/181 (14%) Query: 67 LFSDILDKYQPVLSVIACNTAFTL-----IKDELRSTFPSMAFL-GAVPAIKQAAAYTQS 120 + S++ V + I C+TA + I+ EL++ + L A + S Sbjct: 66 IISELEKSGATVAA-IPCHTAHAVPIFDIIRYELQNKEHKIRLLHMVEETSDYIATHFTS 124 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------- 172 ++ IL+T +++ + + +++ + Sbjct: 125 PVVGILTTTGIRNTGLYNHVFA--AKGLKVI-QPAEEWQEKIQAAIHDEQYGIKASSSPV 181 Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL---IVHVFRQLSPWPVDWLDNSDSIARR 229 + K+E+ G E + + VIVL CT L + +++S P +D + +AR Sbjct: 182 TNRAKEELVGAIHELKKEGATVIVLGCT--ELSWALRE--KEISGLP--LVDPNRILARA 235 Query: 230 A 230 Sbjct: 236 L 236 >gi|165976728|ref|YP_001652321.1| RacX protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190150628|ref|YP_001969153.1| aspartate racemase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250610|ref|ZP_07336807.1| RacX protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252061|ref|ZP_07338230.1| RacX protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248334|ref|ZP_07530358.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|165876829|gb|ABY69877.1| RacX protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915759|gb|ACE62011.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649043|gb|EFL79230.1| RacX protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650598|gb|EFL80757.1| RacX protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855155|gb|EFM87334.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 229 Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 4/133 (3%) Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + +L++ ++A NT + + + S+ FL + A+ + +++L T Sbjct: 68 AKLLEQAGAEGILLATNTMHKVASPIVEA--ISVPFLHILDAVADSIKAKGLTTVALLGT 125 Query: 129 PATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T+ + L ++ + + + E C + + K + Sbjct: 126 AFTMSGNFYVDGLRQRGITPLVPDEQTQQEIHRIIFEELCVGQF-LPQSKAFYLKTIEKL 184 Query: 188 EGKRTDVIVLACT 200 ++L CT Sbjct: 185 TALGAQGVILGCT 197 >gi|307250562|ref|ZP_07532504.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252943|ref|ZP_07534831.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307263975|ref|ZP_07545576.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306857378|gb|EFM89492.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859581|gb|EFM91606.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306870664|gb|EFN02407.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 220 Score = 37.2 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 4/133 (3%) Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128 + +L++ ++A NT + + + S+ FL + A+ + +++L T Sbjct: 59 AKLLEQAGAEGILLATNTMHKVASPIVEA--ISVPFLHILDAVADSIKAKGLTTVALLGT 116 Query: 129 PATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T+ + L ++ + + + E C + + K + Sbjct: 117 AFTMSGNFYVDGLRQRGITPLVPDEQTQQEIHRIIFEELCVGQF-LPQSKAFYLKTIEKL 175 Query: 188 EGKRTDVIVLACT 200 ++L CT Sbjct: 176 TALGAQGVILGCT 188 >gi|229097169|ref|ZP_04228131.1| Aspartate racemase [Bacillus cereus Rock3-29] gi|228685980|gb|EEL39896.1| Aspartate racemase [Bacillus cereus Rock3-29] Length = 227 Score = 37.2 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 50/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 57 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + ++ + Y + I V I + + Sbjct: 115 NI-KRIGLLGTKQTMEQDFYTSRLAKYNIETLIPNDEERTFIHHVILNELSRGIISETSR 173 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 174 EKLIQITNSLIQNGAEGILLGCT 196 >gi|206579517|ref|YP_002236732.1| aspartate racemase family protein [Klebsiella pneumoniae 342] gi|206568575|gb|ACI10351.1| aspartate racemase family protein [Klebsiella pneumoniae 342] Length = 237 Score = 37.2 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 11/142 (7%) Query: 64 LMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119 ++ + L + V+ NT A + + FL A +A A Sbjct: 63 ILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARC------QVPFLHIADATGRAIAAKG 116 Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178 +++L T T+ +T+ L + + I +++ + + + Sbjct: 117 QRRVALLGTRYTMEQTFYRGRLQEQFAIETLIPEADDRARINQIIFDELCLGTFSEASRD 176 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 + + ++ CT Sbjct: 177 YYLQVIAALAEQGAEGVIFGCT 198 >gi|19115408|ref|NP_594496.1| hydantoin racemase family (predicted) [Schizosaccharomyces pombe 972h-] gi|1351671|sp|Q09921|YAKA_SCHPO RecName: Full=Uncharacterized protein C1F7.10 gi|1067212|emb|CAA91957.1| hydantoin racemase family (predicted) [Schizosaccharomyces pombe] Length = 238 Score = 37.2 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 18/134 (13%) Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-RTYTSNLIHSYV-SQCHIHL 152 LR T+ G + A A + +S+++T T R ++ IH+ S Sbjct: 87 LRETYR-KPCTGIMQASIL-TALSLGRKVSVVTT--TKRYEPLLTDGIHAMGISDSVFAG 142 Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-RTDVIVLAC---THYPLIVHV 208 ++S LA E+ + + + DVI L C TH + HV Sbjct: 143 IASTGLAPL-----ELDSKPRAEVDALLARTALRAVNEMGADVICLGCAGMTH---MAHV 194 Query: 209 FRQLSPWPVDWLDN 222 + + +D Sbjct: 195 LEKAVGPNIPIIDG 208 >gi|229488801|ref|ZP_04382667.1| hydantoin racemase [Rhodococcus erythropolis SK121] gi|229324305|gb|EEN90060.1| hydantoin racemase [Rhodococcus erythropolis SK121] Length = 242 Score = 37.2 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 42/127 (33%), Gaps = 11/127 (8%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K + VIAC D R A A+ A+ + + T Sbjct: 65 EKNEVDGYVIAC--FGDPGLDAARELAKGPVVAVAEAAMNYASFLGRG---FSIVTTLGR 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R ++L+ Y Q + S E + D K +E CF E + Sbjct: 120 TRGRAADLVDRYGMQARCRGIHS------CEIPVLELDRDPDARKVILEACFDALEQDDS 173 Query: 193 DVIVLAC 199 DV+VL C Sbjct: 174 DVLVLGC 180 >gi|260599188|ref|YP_003211759.1| hypothetical protein CTU_33960 [Cronobacter turicensis z3032] gi|260218365|emb|CBA33405.1| Uncharacterized protein ygeA [Cronobacter turicensis z3032] Length = 236 Score = 36.8 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 51/161 (31%), Gaps = 21/161 (13%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ V+ NT + ++ + ++ FL A +A A +++L T T Sbjct: 71 LERAGAQAIVLCTNTMHKVA-HQIEARC-ALPFLHIADATGRAIAQAGLRQVALLGTRYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLV-----SSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 + + + + + + + + + C KI + K+ + Sbjct: 129 MEQDFYR---ARLAQGFGVTSLIPNESARARINQIIFDELCLGKITAES-KRYYQQQIER 184 Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSD 224 + ++ CT L PV D + Sbjct: 185 LAEQGAQGVIFGCT-------EIGLLLGAQDCPVPVFDTAA 218 >gi|254466317|ref|ZP_05079728.1| Asp/Glu/Hydantoin racemase family protein [Rhodobacterales bacterium Y4I] gi|206687225|gb|EDZ47707.1| Asp/Glu/Hydantoin racemase family protein [Rhodobacterales bacterium Y4I] Length = 250 Score = 36.8 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 60/182 (32%), Gaps = 33/182 (18%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L++ ++IA NT +R M L A +A A T + +L T T Sbjct: 81 LERAGCDFALIASNTP-HARLHAIREGV-MMPVLSIFDATARATAATGAAQALVLGTAVT 138 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE---IEGCFIEK- 187 ++ +N++ H VS+ E I ED + + + Sbjct: 139 MQARNYANVLAE-------HGVSANDTLPEAEIAEMQAMIDEDFYRGAACGAQDRLLRFC 191 Query: 188 -EGKRTDVIV-LACTHYPLIVHVFRQLSPWPVD----------WLDNSDS-IARRARCLL 234 + R + LACT PL P +D +++ S + +A L Sbjct: 192 GKHARPGTAILLACTELPL-------AFPDHIDDVSFEAGGFLFVNPSAAHVAAALDLAL 244 Query: 235 PR 236 Sbjct: 245 EE 246 >gi|238797440|ref|ZP_04640939.1| Aspartate racemase [Yersinia mollaretii ATCC 43969] gi|238718711|gb|EEQ10528.1| Aspartate racemase [Yersinia mollaretii ATCC 43969] Length = 231 Score = 36.8 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 39/125 (31%), Gaps = 8/125 (6%) Query: 80 SVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138 V+ C NT + D + L A I +L T T+ + + Sbjct: 78 VVVVCTNTMHKVADDI--EAASGLPLLHIADATAAQIKQQGINKIGLLGTRYTMEQDFYR 135 Query: 139 -NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 L + + + +R+ EE G+ ++E + E + I Sbjct: 136 GRLTEKHDIDVITPDSADREIINRIIYEELCLGVINDSS--RQEYRRIMGKLEQQGVQGI 193 Query: 196 VLACT 200 + CT Sbjct: 194 IFGCT 198 >gi|228908369|ref|ZP_04072213.1| Aspartate racemase [Bacillus thuringiensis IBL 200] gi|228851277|gb|EEM96087.1| Aspartate racemase [Bacillus thuringiensis IBL 200] Length = 226 Score = 36.8 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 48/143 (33%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++K ++ NT ++ ++ + +G V A K+ Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + + + Y + I V I K Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISKTSK 172 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195 >gi|110740155|dbj|BAF01976.1| hypothetical protein [Arabidopsis thaliana] Length = 330 Score = 36.8 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 42/116 (36%), Gaps = 18/116 (15%) Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEE-YACGIKIKEDEIKK 178 + +++T ATL + + S + ++M + +E ++ + ++ Sbjct: 217 RVGVMATSATLSAGFYQEKLQSNGFEAVPPDKATMEHTVIPSIEAMKRKDMEGARNLLRI 276 Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230 ++ ++ V++L R L P +D D++AR A Sbjct: 277 ALQVLLVQAVN----VVMLG-------SDEMRDLLPGDDPLLKKCVDPMDALARSA 321 >gi|13476966|ref|NP_108536.1| hydantoin racemase [Mesorhizobium loti MAFF303099] gi|14027729|dbj|BAB54322.1| hydantoin racemase [Mesorhizobium loti MAFF303099] Length = 250 Score = 36.8 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 13/128 (10%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 ++ +VIAC D R+ ++ +G A A++ + +T Sbjct: 67 ERRGAQAAVIAC--FDDTGLDAARAMA-NIPVIGICEAALSMASFIAQRFTVVTTTER-- 121 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-EDEIKKEIEGCFIEKEGKR 191 R L+ Y + ++ I +E+ A G K DEI + +E R Sbjct: 122 SRVPVEGLVQRYGMAGRARVRAADIPVLALEDPASGATGKLRDEIARAVEE-------DR 174 Query: 192 TDVIVLAC 199 + IVL C Sbjct: 175 AEAIVLGC 182 >gi|225182088|ref|ZP_03735517.1| aspartate racemase [Dethiobacter alkaliphilus AHT 1] gi|225167207|gb|EEG76029.1| aspartate racemase [Dethiobacter alkaliphilus AHT 1] Length = 230 Score = 36.8 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 3/150 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 + + L+ + L+ ++ NT ++ + L A Sbjct: 58 EKISQALIKVAGK-LESAGADFILLCTNTMHKFAEEI--QGAIDIELLHIAEATAVEVNR 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 + +L T T+ + + + + Q I + + V + I E K Sbjct: 115 ANIKKVGLLGTRPTMEQDFYTKTLQQNGIQVVIPSHTDREITHNVIFQELCLGIITPESK 174 Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 E + + + I+L CT PL++ Sbjct: 175 NEYKKIINGLIKQGAEGIILGCTEIPLLIK 204 >gi|226308240|ref|YP_002768200.1| hydantoin racemase [Rhodococcus erythropolis PR4] gi|226187357|dbj|BAH35461.1| probable hydantoin racemase [Rhodococcus erythropolis PR4] Length = 242 Score = 36.8 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 42/127 (33%), Gaps = 11/127 (8%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 +K + VIAC D R A A+ A+ + + T Sbjct: 65 EKNEVDGYVIAC--FGDPGLDAARELAKGPVVAVAEAAMNYASFLGRG---FSIVTTLGR 119 Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 R ++L+ Y Q + S E + D K +E CF E + Sbjct: 120 TRGRAADLVDRYGMQARCRGIHS------CEIPVLELDRDPDARKVILEACFDALEQDDS 173 Query: 193 DVIVLAC 199 DV+VL C Sbjct: 174 DVLVLGC 180 >gi|301596772|ref|ZP_07241780.1| glutamate racemase [Acinetobacter baumannii AB059] Length = 37 Score = 36.8 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Query: 7 PCEKKL-QNSILIFDSGIGGLI 27 P K L I IFDSGIGG+ Sbjct: 13 PMPKALADAPIGIFDSGIGGMS 34 >gi|163794386|ref|ZP_02188358.1| Aspartate racemase [alpha proteobacterium BAL199] gi|159180554|gb|EDP65075.1| Aspartate racemase [alpha proteobacterium BAL199] Length = 230 Score = 36.5 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 2/96 (2%) Query: 114 AAAYTQSG--LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 A T G I I T + + + + ++ +RV I Sbjct: 109 AEEATARGMRRIGITGTRWLVDSEVYPEKLSALGLEYARPEMADRDEINRVIMDELVNSI 168 Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207 E + + + D +VL CT PLI+ Sbjct: 169 FRPEAVTTFQRVMGKMKAGGCDAVVLGCTEIPLIMD 204 >gi|205356462|ref|ZP_03223226.1| putative amino-acid recemase [Campylobacter jejuni subsp. jejuni CG8421] gi|205345649|gb|EDZ32288.1| putative amino-acid recemase [Campylobacter jejuni subsp. jejuni CG8421] Length = 193 Score = 36.5 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 3/120 (2%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121 +++ + L+ +IA NT + DE++ ++ L + +A Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118 Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEI 180 I +L T T+ + + ++ I + + + C +IK++ +K + Sbjct: 119 KIGLLGTKYTMTQDFYKKVLIEENISVIIPSDEDIKIVNDIIFNELCKGEIKQESKEKYL 178 >gi|119718274|ref|YP_925239.1| aspartate racemase [Nocardioides sp. JS614] gi|119538935|gb|ABL83552.1| aspartate racemase [Nocardioides sp. JS614] Length = 229 Score = 36.5 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 51/142 (35%), Gaps = 6/142 (4%) Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 ++ + ++ ++ C T F + D++ + + L + A + Sbjct: 60 VAEILAGAARGVEAAGADFLLL-CTTTFHRVADQVAAAV-EIPLLHLADVVADACKAERL 117 Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178 + L T + R++ ++ I ++ H+ +RV +E G + ++ Sbjct: 118 DSVGFLGTTFAMSRSFFTDRIAAHGLTVHVPETRHHETLNRVIYDELVHGKVLDSS--RR 175 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 + G E ++L CT Sbjct: 176 TVVGLVDELWDAGAGGVILGCT 197 >gi|238919191|ref|YP_002932706.1| aspartate racemase, [Edwardsiella ictaluri 93-146] gi|238868760|gb|ACR68471.1| aspartate racemase, putative [Edwardsiella ictaluri 93-146] Length = 231 Score = 36.5 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 40/140 (28%), Gaps = 15/140 (10%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--- 157 + + A + + +L T T+ + + + + ++ Sbjct: 98 GLPLIHIADATARQVQQQHIHRVGLLGTRFTMEQDFYRGRLQDKF-GIEVVTPAAADRDS 156 Query: 158 LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-- 215 + + E C +I + ++E E + I+ CT L Sbjct: 157 IHRIIYEELCLGRIHDAS-RREYRRIISRLEQQGAQGIIFGCT-------EIGLLVGPQD 208 Query: 216 -PVDWLDNSDSIARRARCLL 234 V D + AR A + Sbjct: 209 AGVPVFDTTAIHARAAAEYI 228 >gi|229011906|ref|ZP_04169086.1| Aspartate racemase [Bacillus mycoides DSM 2048] gi|228749320|gb|EEL99165.1| Aspartate racemase [Bacillus mycoides DSM 2048] Length = 227 Score = 36.5 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 48/143 (33%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++ ++ NT ++ ++ + +G V A K+ Sbjct: 57 EEVKNELVAVAKK-VEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + ++ + Y + I V I + K Sbjct: 115 NI-KRIGLLGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGIISETSK 173 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 174 EKLIQITNSLINNGAEGILLGCT 196 >gi|229060327|ref|ZP_04197693.1| Aspartate racemase [Bacillus cereus AH603] gi|229167481|ref|ZP_04295219.1| Aspartate racemase [Bacillus cereus AH621] gi|228616043|gb|EEK73130.1| Aspartate racemase [Bacillus cereus AH621] gi|228718917|gb|EEL70534.1| Aspartate racemase [Bacillus cereus AH603] Length = 227 Score = 36.5 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 48/143 (33%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++ ++ NT ++ ++ + +G V A K+ Sbjct: 57 EEVKNELVAVAKK-VEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + ++ + Y + I V I + K Sbjct: 115 NI-KRIGLLGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGIISETSK 173 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 174 EKLIQITNSLINNGAEGILLGCT 196 >gi|145601767|ref|XP_363067.2| hypothetical protein MGG_08651 [Magnaporthe oryzae 70-15] gi|145010276|gb|EDJ94932.1| hypothetical protein MGG_08651 [Magnaporthe oryzae 70-15] Length = 1244 Score = 36.5 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 16/145 (11%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC--------NTAFTLIKDELRSTFPSMAFLGAVP 109 +K++ + + VIAC N+A T++ + +RS FP + F+ V Sbjct: 32 ETIKRKRNDANTYMFGSMGEHNVVIACLPNGQYGTNSAATVVTNLIRS-FPEVRFVLMVG 90 Query: 110 AIKQAAAYTQSGLIS--ILSTPATLRRTYTS-NLIHSYVSQCHIH----LVSSMILASRV 162 A T + +++TP + S + IL + + Sbjct: 91 IAGGAPNATNDVRLGDVVVATPGLGHGGVLQYDFGKSIQGPNFVVTGHLSPPPPILGTAI 150 Query: 163 EEYACGIKIKEDEIKKEIEGCFIEK 187 ++ + + ++ Sbjct: 151 QQLRVSHDFDPNNLDALVKEALARY 175 >gi|327189079|gb|EGE56265.1| hypothetical protein RHECNPAF_730071 [Rhizobium etli CNPAF512] Length = 255 Score = 36.5 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 13/148 (8%) Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF-LGAVPAI 111 G +++ ++S +D + V T +L + + P L + Sbjct: 75 GALSRQTMRRLATHIWSA-VDAGASAVLV----TCSSLG-PAVDAAMPLCPVPLFRIDDG 128 Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIK 170 A I +L+T T T LI S+ + L++S + E+ G + Sbjct: 129 VAIEALQCGDRIGVLATLFTTLSPTTH-LIESHAQRMGREILLTSHLCEGAFEKLRDGDR 187 Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 D + +E + DV+VLA Sbjct: 188 AAHDALIREGLAALL----GNVDVVVLA 211 >gi|289806464|ref|ZP_06537093.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 115 Score = 36.5 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 15/83 (18%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 23 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 78 Query: 117 YTQSGLISILSTPATLRRTYTSN 139 + +L+T ATL Sbjct: 79 -----HVGLLATNATLATGLYQK 96 >gi|332344731|gb|AEE58065.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 230 Score = 36.5 bits (84), Expect = 4.3, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 57/192 (29%), Gaps = 26/192 (13%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L + V+ NT + D + S S+ FL A +A + Sbjct: 63 ILAEAAFGLQRAGAEGIVLCTNTMHKVA-DVIESRC-SLPFLHIADATGRAITGAGMTRV 120 Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEIKKEIE 181 ++L T T+ + + L + C I + + E C + E + Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEAS-RAYYA 179 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + ++ CT L P R +LP +T Sbjct: 180 QVIARLAEQGAQGVIFGCT-------EIGLLVPEE--------------RSVLPVFDTAA 218 Query: 242 TRVFDDHALFLS 253 D A LS Sbjct: 219 IHAEDAVAFMLS 230 >gi|78066918|ref|YP_369687.1| aspartate racemase [Burkholderia sp. 383] gi|77967663|gb|ABB09043.1| Aspartate racemase [Burkholderia sp. 383] Length = 230 Score = 36.5 bits (84), Expect = 4.3, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 3/134 (2%) Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127 + L+ L V+ NT + + ++ FL A +++L Sbjct: 67 AARQLEAAGADLVVLTTNTMHRVC--DAIEAAVTLPFLHIADPTGSALRDAGVERVALLG 124 Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 T T+ + + L + + + R+ I E + E Sbjct: 125 TRYTMELPFYAERLRGKFGMEVLVPDERGRDDVHRIIYDELCHGIISPESRATYVTIIEE 184 Query: 187 KEGKRTDVIVLACT 200 + ++L CT Sbjct: 185 LARRGAQAVILGCT 198 >gi|299531138|ref|ZP_07044550.1| aspartate racemase [Comamonas testosteroni S44] gi|298720841|gb|EFI61786.1| aspartate racemase [Comamonas testosteroni S44] Length = 242 Score = 36.5 bits (84), Expect = 4.3, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 47/159 (29%), Gaps = 9/159 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L +ACNTA ++++ FP + L + +L+T Sbjct: 80 LAALGVRSVALACNTA--HAWHGQIQALFPQLRVLHIAQQTALYLKAGGARQALVLATDG 137 Query: 131 TLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKED-EIKKEIEGCFIEKE 188 T + + L + E + + E +++ Sbjct: 138 TYDSGLYDAALADCGIAALRPGQAGRARLMQGIYEGVKQGDMPLAVQCFGEALAPLLQRH 197 Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 G +++ CT PL + Q +D + +A Sbjct: 198 GAVP--VIMGCTEIPLALPQASQARGAE--LVDPAWILA 232 >gi|226313632|ref|YP_002773526.1| RNA polymerase ECF-type sigma factor [Brevibacillus brevis NBRC 100599] gi|226096580|dbj|BAH45022.1| RNA polymerase ECF-type sigma factor [Brevibacillus brevis NBRC 100599] Length = 189 Score = 36.5 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 14/66 (21%) Query: 177 KKEIEGCFIEKEGKRTDVIVLACTH-YPLIVHVFRQLSPWPVDWLDNSDSIAR----RAR 231 ++EI+ F +VIVL CTH YP L ++S AR RAR Sbjct: 118 RREIQEAFALLSDSYREVIVLRCTHEYPF--EKIATLLGI-------AESTARVRYLRAR 168 Query: 232 CLLPRI 237 L ++ Sbjct: 169 QELAKL 174 >gi|238759047|ref|ZP_04620217.1| Aspartate racemase [Yersinia aldovae ATCC 35236] gi|238702724|gb|EEP95271.1| Aspartate racemase [Yersinia aldovae ATCC 35236] Length = 231 Score = 36.5 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 13/135 (9%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131 L + V+ NT + D T + L A + I +L T T Sbjct: 71 LKHAGAEVIVVCTNTMHKVADDI--ETACGLPLLHIADATAAQIKQQEINKIGLLGTRYT 128 Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV------EEYACGIKIKEDEIKKEIEGCFI 185 + + + + HI +V+ + EE GI + + E Sbjct: 129 MEQDFYRG---RLTEKHHIEVVTPESTDREIINRIIYEELCLGII--SETSRNEYRRIMG 183 Query: 186 EKEGKRTDVIVLACT 200 E + I+ CT Sbjct: 184 ELVHQGVQGIIFGCT 198 >gi|56964466|ref|YP_176197.1| chromosome replication initiation/membrane attachment protein DnaB [Bacillus clausii KSM-K16] gi|56910709|dbj|BAD65236.1| chromosome replication initiation/membrane attachment protein DnaB [Bacillus clausii KSM-K16] Length = 480 Score = 36.5 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 28/56 (50%) Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192 T LI ++ V + +A+ VE+ + G + ED+++K I+ + + G + Sbjct: 226 TDRLIDLIKKLAFVYQVEPLTMANLVEQASRGDMLDEDDLRKTIKEWYRLENGTKP 281 >gi|333016504|gb|EGK35835.1| hypothetical protein SFK304_3260 [Shigella flexneri K-304] Length = 56 Score = 36.5 bits (84), Expect = 4.5, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 17/46 (36%), Gaps = 1/46 (2%) Query: 97 STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142 +FP L + + Q + I++T T++ LI Sbjct: 11 KSFP-FPILSIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIK 55 >gi|256422419|ref|YP_003123072.1| aspartate racemase [Chitinophaga pinensis DSM 2588] gi|256037327|gb|ACU60871.1| aspartate racemase [Chitinophaga pinensis DSM 2588] Length = 238 Score = 36.5 bits (84), Expect = 4.5, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 53/181 (29%), Gaps = 44/181 (24%) Query: 52 YGNWEDH----------ALKKRLMFLF-------------SDILDKYQPVLSVIACNTA- 87 YG + A+ R + IL+ ++V+AC TA Sbjct: 28 YGEKDQEYIDVLLHNNTAIPDRTRAIVYNETSPLPELLRSVKILNNNDVDVAVMACLTAY 87 Query: 88 ---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144 +L + + + V +++ + ++++ TLR + Sbjct: 88 HFKSSLAPVF--NGYFADPIEFTVERLQEMFGDLDGLKVGVIASTGTLRSRIFQKALEPL 145 Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-----KEIEGCFIE----KEGKRTDVI 195 + + E Y G K D +K E F + K DV+ Sbjct: 146 --GATVICLEGDEQ----ERYFMGPIYKPDGLKSGHASAEAIRLFAHQVPLLQDKGADVV 199 Query: 196 V 196 + Sbjct: 200 I 200 >gi|194367443|ref|YP_002030053.1| response regulator receiver protein [Stenotrophomonas maltophilia R551-3] gi|194350247|gb|ACF53370.1| response regulator receiver protein [Stenotrophomonas maltophilia R551-3] Length = 280 Score = 36.5 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 30/172 (17%) Query: 90 LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT---YTSNLIHSYVS 146 LI D LR P + +G +I++A G + +++T TLR + +I Sbjct: 28 LIADVLRRDLPGVEVIGC-DSIEEAQQALAQGPVDLVTTSLTLRDGDGLALARMIREAAG 86 Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206 Q ++ V +++ + + F + G + Sbjct: 87 QAYV--------PVIVVSGDAQQHLEQRRFTEYVTDYFDKALGHEA------------LA 126 Query: 207 HVFRQLS------PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252 R + ++++S +A + +L R + V F Sbjct: 127 TFIRGYVQPQTIPGATILYIEDSRVVAEATKRMLERQQLNVLHVVSAEEAFT 178 >gi|260770433|ref|ZP_05879366.1| hydantoin racemase [Vibrio furnissii CIP 102972] gi|260615771|gb|EEX40957.1| hydantoin racemase [Vibrio furnissii CIP 102972] Length = 243 Score = 36.5 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 12/144 (8%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 D + + + +IAC D R S+ +G A Q A+ Sbjct: 49 DETIAAAALLDVIAQGEAEGVDAHIIAC--FGDPAIDAARE-LASVPVIGIAGAAFQLAS 105 Query: 117 YTQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 S +++T TL +L+H Y V + +A +I+ Sbjct: 106 LV-SHRFGVVTTMSRTL--PAAEHLLHRYGYHHLCSGVRATDIAVL-----DLEQIQASA 157 Query: 176 IKKEIEGCFIEKEGKRTDVIVLAC 199 ++ ++ C + IVL C Sbjct: 158 YQQLLQECRAAINQDGAEAIVLGC 181 >gi|163940450|ref|YP_001645334.1| aspartate racemase [Bacillus weihenstephanensis KBAB4] gi|163862647|gb|ABY43706.1| aspartate racemase [Bacillus weihenstephanensis KBAB4] Length = 227 Score = 36.5 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++ ++ NT ++ ++ + +G V A K+ Sbjct: 57 EEVKNELVTVAKK-VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + ++ + Y + I V + + K Sbjct: 115 NI-KRIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGVISETSK 173 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 174 EKLIQITNSLINNGAEGILLGCT 196 >gi|32188214|gb|AAP46180.1| conserved hypothetical protein [Sphingomonas elodea] Length = 478 Score = 36.1 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 69/212 (32%), Gaps = 36/212 (16%) Query: 32 MRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI 91 + P+ ++ + D+ P G ++ ++ L ++ ++ Sbjct: 149 LVRTGPDEFYV-LEDNARTPSGVSYMLENREAMIRLCPELFRDFRVAPV----------- 196 Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151 ++P M + ++ A ++ + ++ TP Y + + Sbjct: 197 -----DSYPDM----LLETMRSVAPSGRARPVCVVLTPGHFNSAYYEHSF--LADSMGVE 245 Query: 152 LVSSMILA---SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208 LV + L V +++ D I + I+ F++ + D + L + + Sbjct: 246 LVEAADLVVDDDIVYMETIAGRVRVDVIYRRIDDDFLDPLVFKPDSL-LG------VPGL 298 Query: 209 FRQLSPWPVDWLD-NSDSIA--RRARCLLPRI 237 V L+ + IA + +P I Sbjct: 299 IAAYRAGNVALLNAPGNGIADDKAIYSYMPEI 330 >gi|229589817|ref|YP_002871936.1| hypothetical protein PFLU2331 [Pseudomonas fluorescens SBW25] gi|229361683|emb|CAY48564.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 455 Score = 36.1 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 8/52 (15%) Query: 165 YACGIKIKEDEIKKEIE---GCFIEKEGKRTDVIVLACT----HYPLIVHVF 209 YA +E + + +E F++ K D ++L CT H+P + Sbjct: 235 YAWPDNWEEKPLLQRLENNRAYFVDGSSKHIDAVIL-CTGYKHHFPFLPDEL 285 >gi|291086213|ref|ZP_06355123.2| aspartate racemase [Citrobacter youngae ATCC 29220] gi|291068551|gb|EFE06660.1| aspartate racemase [Citrobacter youngae ATCC 29220] Length = 231 Score = 36.1 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 45/139 (32%), Gaps = 5/139 (3%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 L+ + L + V+ NT + + + FL A +A Q + Sbjct: 64 LLAQAAVGLQQAGAQGIVLCTNTMHKVAEAI--EAACDVPFLHIADATGRAIQKRQMNNV 121 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSS--MILASRVEEYACGIKIKEDEIKKEIE 181 ++L T T+ + + + + + + + + + C + + ++ Sbjct: 122 ALLGTRYTMEQDFYRGRLQAEFGINTVIPDADERQKINQIIFDELCLGEFSDAS-REYYL 180 Query: 182 GCFIEKEGKRTDVIVLACT 200 E + ++ CT Sbjct: 181 RVIGELAKQGAQGVIFGCT 199 >gi|255019972|ref|ZP_05292046.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Acidithiobacillus caldus ATCC 51756] gi|254970631|gb|EET28119.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Acidithiobacillus caldus ATCC 51756] Length = 377 Score = 36.1 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 13/24 (54%) Query: 22 GIGGLIVLQKMRFLMPEYHFIYVA 45 G GGL ++ +R +P+ +A Sbjct: 10 GFGGLTAVRHLRRQLPDAEIHLLA 33 >gi|154174439|ref|YP_001407836.1| aspartate racemase [Campylobacter curvus 525.92] gi|153793095|gb|EAT99446.2| aspartate racemase [Campylobacter curvus 525.92] Length = 232 Score = 36.1 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 4/75 (5%) Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTP 129 L +++CNTA +D + + L A A Y + I++++T Sbjct: 73 LKNAGCEALLMSCNTAHFFAEDIQKQA--GVKILHIARAAVDAIKGRYPDAKDIAVIATS 130 Query: 130 ATLRRTYTSNLIHSY 144 T + ++ Y Sbjct: 131 GTKKARVYDKILDEY 145 >gi|293449164|ref|ZP_06663585.1| aspartate racemase [Escherichia coli B088] gi|300815740|ref|ZP_07095964.1| aspartate racemase [Escherichia coli MS 107-1] gi|291322254|gb|EFE61683.1| aspartate racemase [Escherichia coli B088] gi|300531669|gb|EFK52731.1| aspartate racemase [Escherichia coli MS 107-1] gi|323183385|gb|EFZ68782.1| aspartate racemase family protein [Escherichia coli 1357] gi|323946524|gb|EGB42548.1| Asp/Glu/Hydantoin racemase [Escherichia coli H120] Length = 230 Score = 36.1 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 58/192 (30%), Gaps = 26/192 (13%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L + V+ NT + D + S ++ FL A +A + Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKVA-DAIESRC-TLPFLHIADATGRAITGAGMTRV 120 Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEIKKEIE 181 ++L T T+ + + L+ + C I + + E C + E + Sbjct: 121 ALLGTRYTMEQDFYRGRLMEQFSINCLIPEADERAKINQIIFEELCLGQFTEAS-RAYYA 179 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + ++ CT L P R +LP +T Sbjct: 180 QVIARLAEQGAQGVIFGCT-------EIGLLVPEE--------------RSVLPVFDTAA 218 Query: 242 TRVFDDHALFLS 253 D A LS Sbjct: 219 IHAEDAVAFMLS 230 >gi|229133473|ref|ZP_04262300.1| Aspartate racemase [Bacillus cereus BDRD-ST196] gi|228649873|gb|EEL05881.1| Aspartate racemase [Bacillus cereus BDRD-ST196] Length = 227 Score = 36.1 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 48/143 (33%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++ ++ NT ++ ++ + +G V A K+ Sbjct: 57 EEVKNELVTVAKK-VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + ++ + Y + I V + + K Sbjct: 115 NI-KRIGLLGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGVISETSK 173 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 174 EKLIQITNSLINNGAEGILLGCT 196 >gi|160944697|ref|ZP_02091924.1| hypothetical protein FAEPRAM212_02211 [Faecalibacterium prausnitzii M21/2] gi|158443881|gb|EDP20885.1| hypothetical protein FAEPRAM212_02211 [Faecalibacterium prausnitzii M21/2] gi|295104347|emb|CBL01891.1| Lysyl-tRNA synthetase (class II) [Faecalibacterium prausnitzii SL3/3] Length = 503 Score = 36.1 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 1/94 (1%) Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 +G + +K T++G +S+ +T TL L + + + Sbjct: 116 VGDIIGVKGEVFRTKTGELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDLIAN 175 Query: 165 YAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 IK I KEI EK D +L Sbjct: 176 PEVKDTFIKRSRILKEIRAYLDEKGFLEVDTPIL 209 >gi|195115910|ref|XP_002002499.1| GI12386 [Drosophila mojavensis] gi|193913074|gb|EDW11941.1| GI12386 [Drosophila mojavensis] Length = 348 Score = 36.1 bits (83), Expect = 5.6, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 12/77 (15%) Query: 157 ILASRVEEYACGIKIKEDEIKKEIEGCF---IEKEGKRTDVIVLAC-THYPL--IVHVFR 210 L SRVE G+ E EI G F I D++VL C H PL + R Sbjct: 49 ELLSRVERVIQGLW---PEALVEIFGSFRLGINLPNSDIDLVVLGCWEHLPLRSLESELR 105 Query: 211 Q---LSPWPVDWLDNSD 224 + P + +D + Sbjct: 106 SSGIVLPGTLQVVDTAA 122 >gi|152977916|ref|YP_001343545.1| aspartate racemase [Actinobacillus succinogenes 130Z] gi|150839639|gb|ABR73610.1| aspartate racemase [Actinobacillus succinogenes 130Z] Length = 231 Score = 36.1 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 45/137 (32%), Gaps = 2/137 (1%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + +L++ ++A NT + + + S+ FL + + + Sbjct: 63 ILAEQAKLLERAGADGILLATNTMHKVA-NRITDRI-SVPFLHILDVVANRIKARGLTHV 120 Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183 ++L T T+ + + + + R+ + + + E K Sbjct: 121 ALLGTAFTMSDNFYRDGLTQRGINAIVPDKKDQREIHRIIFDELCLGVIKPESKDFYLKT 180 Query: 184 FIEKEGKRTDVIVLACT 200 + ++L CT Sbjct: 181 IEKLTALGARGVILGCT 197 >gi|327396655|dbj|BAK14076.1| aspartate racemase YgeA [Pantoea ananatis AJ13355] Length = 230 Score = 36.1 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 37/108 (34%), Gaps = 17/108 (15%) Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR 161 + FL A +A +++L T T+ + + + Q +++ L Sbjct: 99 LPFLHIADATGRAITSKGMTRVALLGTRYTMEQDFY---LGRLNKQ---FSIAT--LVPP 150 Query: 162 VEEYACGIKIKEDEI---------KKEIEGCFIEKEGKRTDVIVLACT 200 E+ +I DE+ ++ E + + ++ CT Sbjct: 151 AEQRNVINQIIFDELCMGKFSEGSRQYYLEVIQELASQGAEGVIFGCT 198 >gi|209547301|ref|YP_002279219.1| hypothetical protein Rleg2_5297 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538545|gb|ACI58479.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 232 Score = 36.1 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 15/125 (12%) Query: 76 QPVLSVIACNTAFTL--IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 V+ C TL D + P F K A I +L+T +T Sbjct: 76 GADAIVVTC---STLGPAVDAIAPLCPVPLFRIDEGMAKAAVE--HGNCIGVLATLSTTL 130 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI--KEDEIKKEIEGCFIEKEGKR 191 T++L+ + ++V +L ++ + + EI++ +E ++ Sbjct: 131 VP-TADLLRRQACEAGKNVVIDDVLVHGAFQFLADGNVEAHDAEIRRALEEL-----SQK 184 Query: 192 TDVIV 196 DVIV Sbjct: 185 VDVIV 189 >gi|291619636|ref|YP_003522378.1| YgeA [Pantoea ananatis LMG 20103] gi|291154666|gb|ADD79250.1| YgeA [Pantoea ananatis LMG 20103] Length = 231 Score = 36.1 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 37/108 (34%), Gaps = 17/108 (15%) Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR 161 + FL A +A +++L T T+ + + + Q +++ L Sbjct: 100 LPFLHIADATGRAITSKGMTRVALLGTRYTMEQDFY---LGRLNKQ---FSIAT--LVPP 151 Query: 162 VEEYACGIKIKEDEI---------KKEIEGCFIEKEGKRTDVIVLACT 200 E+ +I DE+ ++ E + + ++ CT Sbjct: 152 AEQRNVINQIIFDELCMGTFTEGSRQYYLEVIQELASQGAEGVIFGCT 199 >gi|240172289|ref|ZP_04750948.1| putative dehydrogenase/reductase [Mycobacterium kansasii ATCC 12478] Length = 393 Score = 36.1 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 16/29 (55%) Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYH 40 + +I+I +G+GGL +R L+P Sbjct: 1 MSKTIVILGAGVGGLTTADSLRQLLPPED 29 >gi|222823740|ref|YP_002575314.1| aspartate racemase [Campylobacter lari RM2100] gi|222538962|gb|ACM64063.1| aspartate racemase [Campylobacter lari RM2100] Length = 227 Score = 36.1 bits (83), Expect = 6.1, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 10/133 (7%) Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 +L K +I NT + ++ + L A+ + +L T Sbjct: 70 LLQKCGVDFILICTNTM-HKCYENIQKNI-QIPILHLAKAMLLELQEQNIDKVLLLGTKY 127 Query: 131 TLRRTYTSNLIHSYVSQCHIHLV---SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 T++ + L+ S+ + + + L + C I E K+ + + Sbjct: 128 TMQEDFYKQLL--INSKIEVFIPKNDDILKLNDIIFNELCKGIINEKS-KRYLCDLIAQF 184 Query: 188 EGKRTDVIVLACT 200 + ++L CT Sbjct: 185 --PQVQGVILGCT 195 >gi|308048287|ref|YP_003911853.1| aspartate racemase [Ferrimonas balearica DSM 9799] gi|307630477|gb|ADN74779.1| aspartate racemase [Ferrimonas balearica DSM 9799] Length = 236 Score = 35.7 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 7/139 (5%) Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124 + L + L++ +I NT + + S+ L A ++ Sbjct: 68 LALAAQALERAGAEGLLIGTNTMHKVAPQIANA--ISIPLLHIADATGARLQADGITCVA 125 Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR---VEEYACGIKIKEDEIKKEIE 181 +L T T+ + + + + L + A + + C + +D + + Sbjct: 126 LLGTRFTMEQAFYRERLEQ-GYGIEVRLPDAAERARIHQVIFDQLCQGQFNDDARRDYVA 184 Query: 182 GCFIEKEGKRTDVIVLACT 200 + +L CT Sbjct: 185 -IIERLHREGAQGAILGCT 202 >gi|213416637|ref|ZP_03349781.1| aspartate racemase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 120 Score = 35.7 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 15/83 (18%) Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116 R + + +L+ VI CNTA D+L++ + LG +P + Sbjct: 32 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 87 Query: 117 YTQSGLISILSTPATLRRTYTSN 139 + +L+T ATL Sbjct: 88 -----HVGLLATNATLATGLYQK 105 >gi|166368626|ref|YP_001660899.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843] gi|166090999|dbj|BAG05707.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843] Length = 639 Score = 35.7 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 12/81 (14%) Query: 158 LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL-------IVHVFR 210 L + E+Y +I ++ + IE+ R ++L YPL + R Sbjct: 300 LLEKSEKYVIAKRIADNLSLDHLHASEIERLKARIQSLLL----YPLHAIGDKLVYGKIR 355 Query: 211 QLSPWPVD-WLDNSDSIARRA 230 Q V + S+AR Sbjct: 356 QAVGNKVKILVSGGGSLARHL 376 >gi|332296382|ref|YP_004438305.1| phosphonate ABC transporter, periplasmic phosphonate-binding protein [Thermodesulfobium narugense DSM 14796] gi|332179485|gb|AEE15174.1| phosphonate ABC transporter, periplasmic phosphonate-binding protein [Thermodesulfobium narugense DSM 14796] Length = 346 Score = 35.7 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 3/46 (6%) Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL 105 ++KR F D+ + + +I TA + DE + ++ + Sbjct: 129 IQKRTNFEIKDLFNSKAVDIGII---TASAYVLDEDQMDILAIPVI 171 >gi|221069700|ref|ZP_03545805.1| aspartate racemase [Comamonas testosteroni KF-1] gi|220714723|gb|EED70091.1| aspartate racemase [Comamonas testosteroni KF-1] Length = 242 Score = 35.7 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 17/163 (10%) Query: 72 LDKYQPVLSVIACNTAFTLIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130 L +ACNTA ++++ FP + L + +L+T Sbjct: 80 LAALGVRSVALACNTA--HAWHGQIQALFPQLRVLHIAQQTALYLKAGGARQALVLATDG 137 Query: 131 TLRRTYTSNLIHSYVSQCHIHLV--SSMILASRVEEYACGIKIKEDEIK----KEIEGCF 184 T + + C I + A ++ G+K + + E Sbjct: 138 TYDSGLYDAAL----ADCGIAALRPGPAGRARLMQGIYEGVKQGDMPLAVQCFGEALAPL 193 Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227 +++ G +++ CT PL + Q +D + +A Sbjct: 194 LQRHGAVP--VIMGCTEIPLALPQASQARGAE--LVDPAWILA 232 >gi|157363771|ref|YP_001470538.1| aspartate racemase [Thermotoga lettingae TMO] gi|157314375|gb|ABV33474.1| aspartate racemase [Thermotoga lettingae TMO] Length = 225 Score = 35.7 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 17/161 (10%) Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129 +L++ + +V CNTA+ D ++ ++ L + I + T Sbjct: 68 KMLEREKADFAVFICNTAYAF-LDRVQKQV-NIPVLNLPEMTLRKLKSKGIEEIWLTGTR 125 Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI--KIKEDEIKKEIEGCFIEK 187 L I R++E I +K +IKK F + Sbjct: 126 GLLNSRVYQREAEKIGLTLKIPE-------ERLQESLMQIIYTVKAGQIKKASLIWFSDV 178 Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228 E ++L CT P++ + +D +D A+ Sbjct: 179 EPYLDGHVLLGCTELPVVAKS------KRLHLIDVNDEWAK 213 >gi|312115228|ref|YP_004012824.1| multi-sensor signal transduction histidine kinase [Rhodomicrobium vannielii ATCC 17100] gi|311220357|gb|ADP71725.1| multi-sensor signal transduction histidine kinase [Rhodomicrobium vannielii ATCC 17100] Length = 493 Score = 35.7 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 211 QLSPWPVDWLDNSD---SIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267 QL P ++++ A R LL + + AL SG P+ A+ RL + + Sbjct: 94 QLIPQTRRLIESAPPQLERAERLTVLLDLMTRKADEMAGTVALAASGPPEAAIERLKENY 153 Query: 268 GL 269 G+ Sbjct: 154 GI 155 >gi|169831058|ref|YP_001717040.1| ATP-grasp domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637902|gb|ACA59408.1| ATP-grasp domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 700 Score = 35.7 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 28/102 (27%), Gaps = 31/102 (30%) Query: 25 GLIVLQ-------KMRFLMPEYHFIY-----VADDVGFPYGNWEDHALKKRLMFLFSDIL 72 GL + + +R +P IY + D R F +L Sbjct: 322 GLTIARFNKATLEALRAELPREANIYNPVDVLGD-ARA-----------DRYRFALEKVL 369 Query: 73 -DKYQPVLSVIACNTAFTL------IKDELRSTFPSMAFLGA 107 D+ V+ C TA E+ FP G Sbjct: 370 ADESVDSAVVLVCPTATAEPGETAKAIVEVARRFPDKPLFGV 411 >gi|83949723|ref|ZP_00958456.1| aspartate racemase [Roseovarius nubinhibens ISM] gi|83837622|gb|EAP76918.1| aspartate racemase [Roseovarius nubinhibens ISM] Length = 215 Score = 35.7 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 2/81 (2%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L++ + CNTA D +R + FL + A + I Sbjct: 54 VLAAMAQDLERAGAQALAMPCNTAHHYA-DAVREA-SGLPFLDMLELTAAHLAALGAKRI 111 Query: 124 SILSTPATLRRTYTSNLIHSY 144 +L++PAT R + ++ Sbjct: 112 GMLASPATRRVGVFDAIFAAH 132 >gi|251771898|gb|EES52472.1| transcriptional regulator, LysR family [Leptospirillum ferrodiazotrophum] Length = 309 Score = 35.7 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 18/99 (18%) Query: 151 HLVSSMIL------ASRVEEYACGIKIKEDEIKK--EIEGCFIEKEGKRTDVIVLACTHY 202 V + + + ++ E+ +++ E E +G D +VL C+HY Sbjct: 46 REVGAPLFSRFGRGVRLTKAGEVLLRESEEIVRQVGEALRRVREADGLARDRLVLGCSHY 105 Query: 203 --------PLIVHVFRQLSPWPVDWL-DNSDSIARRARC 232 P + R+ + + +S++IA + R Sbjct: 106 VASNGLAAP-LREFGRRAPGVGITLVLGSSEAIAGKVRQ 143 >gi|229017933|ref|ZP_04174811.1| Aspartate racemase [Bacillus cereus AH1273] gi|229024154|ref|ZP_04180621.1| Aspartate racemase [Bacillus cereus AH1272] gi|228737150|gb|EEL87678.1| Aspartate racemase [Bacillus cereus AH1272] gi|228743358|gb|EEL93480.1| Aspartate racemase [Bacillus cereus AH1273] Length = 227 Score = 35.7 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 3/143 (2%) Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117 +K L+ + ++ ++ NT ++ ++ + +G V A K+ Sbjct: 57 EEVKNELVTVAKK-VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114 Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177 I +L T T+ + + ++ + Y + I V I + K Sbjct: 115 NI-KRIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGIISETSK 173 Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200 +++ + I+L CT Sbjct: 174 EKLIQITNSLIQNGAEGILLGCT 196 >gi|114769458|ref|ZP_01447084.1| flavin-containing monooxygenase [alpha proteobacterium HTCC2255] gi|114550375|gb|EAU53256.1| flavin-containing monooxygenase [alpha proteobacterium HTCC2255] Length = 444 Score = 35.7 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 5/33 (15%) Query: 182 GCFIEKEGKRTDVIVLACT----HYPLIVHVFR 210 F + K D ++L CT H+P + R Sbjct: 253 AHFKDGTSKEIDAVIL-CTGYQHHFPYLTDELR 284 >gi|146312927|ref|YP_001178001.1| putative racemase [Enterobacter sp. 638] gi|145319803|gb|ABP61950.1| aspartate racemase [Enterobacter sp. 638] Length = 230 Score = 35.7 bits (82), Expect = 7.2, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 37/101 (36%), Gaps = 1/101 (0%) Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159 S+ FL A +A A T +++L T T+ + + L + + + + Sbjct: 98 SLPFLHIADATGRAIAATGMQRVALLGTRYTMEQDFYRGRLETQFGIESIVPDEADRARI 157 Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 +++ + D + G + + + ++ CT Sbjct: 158 NQIIFEELCLGTFSDASRHYYLGVIDKLAKQGAEGVIFGCT 198 >gi|170743394|ref|YP_001772049.1| hypothetical protein M446_5292 [Methylobacterium sp. 4-46] gi|168197668|gb|ACA19615.1| conserved hypothetical protein [Methylobacterium sp. 4-46] Length = 327 Score = 35.7 bits (82), Expect = 7.6, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 15/151 (9%) Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ-- 119 RL + D++ + V+ V+ NT L P + + PA T Sbjct: 75 DRLDGMAEDLVREGVAVIVVLG-NTTSALAAKRATERIPIVVRMAVDPASIGLVQSTSRP 133 Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV----SSMILASR----VEEYACGIKI 171 G ++ +T L+ + + V ++ ILA R V E A + Sbjct: 134 GGNLTGWTTLGAQIGPKQLELLRELIPPGVVVAVLVNPTNPILADRQAREVPEAARALGF 193 Query: 172 KEDEIK----KEIEGCFIEKEGKRTDVIVLA 198 + + +I F G ++L Sbjct: 194 EPLVVTASGDADIAAAFARLSGAGARGLILG 224 >gi|291278661|ref|YP_003495496.1| transcription-repair coupling factor [Deferribacter desulfuricans SSM1] gi|290753363|dbj|BAI79740.1| transcription-repair coupling factor [Deferribacter desulfuricans SSM1] Length = 1111 Score = 35.7 bits (82), Expect = 7.7, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 29/127 (22%) Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154 R + F AI+ AA ++ ++IL+ L R + N I + Sbjct: 594 RLVCGDVGFGKTEVAIRAAAKAVENYKQVAILAPTTVLVRQHYQNFIERFKD-------- 645 Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214 VE EIK+ +E + D+I+ TH +L Sbjct: 646 -----MPVEIDYISRFKTSREIKRALER----LKKGEIDIII-G-TH---------RLLS 685 Query: 215 WPVDWLD 221 V++ D Sbjct: 686 KDVEFYD 692 >gi|260574787|ref|ZP_05842790.1| Asp/Glu/hydantoin racemase [Rhodobacter sp. SW2] gi|259023204|gb|EEW26497.1| Asp/Glu/hydantoin racemase [Rhodobacter sp. SW2] Length = 226 Score = 35.7 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 41/126 (32%), Gaps = 13/126 (10%) Query: 76 QPVLSVIACNTAFTL--IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133 V+ C TL D R P + + AA I +L+T AT Sbjct: 70 GADAVVVTC---STLGPAVDAARPLCP-VPLARIDEGMAMAA-VRLGARIGVLATVATTL 124 Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEY-ACGIKIKEDEIKKEIEGCFIEKEGKRT 192 + TS+LI + + + LA + A G D + Sbjct: 125 QP-TSDLIRRMAAAADRDISLTAKLAEGAFQKLAQGDTAAHDAMVGRALRNLAPL----V 179 Query: 193 DVIVLA 198 DVIVLA Sbjct: 180 DVIVLA 185 >gi|169840380|ref|ZP_02873568.1| hypothetical protein cdivTM_25124 [candidate division TM7 single-cell isolate TM7a] Length = 23 Score = 35.7 bits (82), Expect = 8.0, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 10/21 (47%) Query: 74 KYQPVLSVIACNTAFTLIKDE 94 + V+ACNTA L + Sbjct: 3 EKNVSAIVVACNTATALALKD 23 >gi|315181503|gb|ADT88416.1| Asp/Glu racemase [Vibrio furnissii NCTC 11218] Length = 243 Score = 35.3 bits (81), Expect = 8.2, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 12/144 (8%) Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116 D + + + +IAC D R S+ +G A Q A+ Sbjct: 49 DETIAAAALLDVIAQGEADGVDAHIIAC--FGDPAIDAARE-LASVPVIGIAGAAFQLAS 105 Query: 117 YTQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175 S +++T TL +L+H Y V + +A +I+ Sbjct: 106 LV-SHRFGVVTTMSRTL--PAAEHLLHRYGYHHLCSGVRATDIAVL-----DLEQIQASA 157 Query: 176 IKKEIEGCFIEKEGKRTDVIVLAC 199 ++ ++ C + IVL C Sbjct: 158 YQQLLQECRAAISQDGAEAIVLGC 181 >gi|323491837|ref|ZP_08097012.1| aspartate racemase [Vibrio brasiliensis LMG 20546] gi|323313972|gb|EGA67061.1| aspartate racemase [Vibrio brasiliensis LMG 20546] Length = 230 Score = 35.3 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 48/142 (33%), Gaps = 11/142 (7%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + ++K +IA NT + + ++ L A + Sbjct: 63 ILCQAAQSIEKAGADFILIATNTMHKVAEQV--EESVNLPLLHIADATGSELKQQGITKV 120 Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKI---KEDEIKK 178 +L T T+ + + L + + + L + + + C +I +D+ Sbjct: 121 GLLGTVFTMEQDFYKQRLTDKFGIEVVVPNGVQRQLVHNIIYDELCQGEINRRSKDDFLT 180 Query: 179 EIEGCFIEKEGKRTDVIVLACT 200 I+ F+ ++L CT Sbjct: 181 IIDDLFV----AGAQGVILGCT 198 >gi|331654323|ref|ZP_08355323.1| putative resistance protein [Escherichia coli M718] gi|331047705|gb|EGI19782.1| putative resistance protein [Escherichia coli M718] Length = 230 Score = 35.3 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 26/192 (13%) Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123 ++ + L + V+ NT + D + S ++ FL A +A + Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKVA-DAIESRC-TLPFLHIADATGRAITGAGMTRV 120 Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEIKKEIE 181 ++L T T+ + + L + C I + + E C + E + Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEAS-RAYYA 179 Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241 + ++ CT L P R +LP +T Sbjct: 180 QVIARLAEQGAQGVIFGCT-------EIGLLMPEE--------------RSVLPVFDTAA 218 Query: 242 TRVFDDHALFLS 253 D A LS Sbjct: 219 IHAEDAVAFMLS 230 >gi|218670847|ref|ZP_03520518.1| Asp/Glu/hydantoin racemase [Rhizobium etli GR56] Length = 145 Score = 35.3 bits (81), Expect = 8.4, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 16/108 (14%) Query: 131 TLRRTY--TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 TL R+ NL+ Y + +S I +E+ A G +++ EIE E Sbjct: 14 TLERSRVLIDNLVRRYGMGERAKVRASDIPVLELEDAASGAI---GKLRAEIERALAE-- 68 Query: 189 GKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 + IVL C T + +++ V +D + ++A L Sbjct: 69 -DGAEAIVLGCAGMT---DLARELQEIYG--VPVVDGVAAAVKQAEAL 110 >gi|289579706|ref|YP_003478172.1| ABC transporter [Natrialba magadii ATCC 43099] gi|289529259|gb|ADD03610.1| ABC transporter related protein [Natrialba magadii ATCC 43099] Length = 395 Score = 35.3 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 16/130 (12%), Positives = 34/130 (26%), Gaps = 33/130 (25%) Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA---------SRVE 163 QA A T S I++L L + + + + +E Sbjct: 194 QAEAMTMSNRIAVL------NEGKLQQL----APPLECYNEPANLFVAGFIGSPSMNFME 243 Query: 164 EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 + + + E + + + L + P V + + Sbjct: 244 GELTATGFESENVDVAFEPELVPSMDVG-ETLTLG-------------VRPEDVHLVATA 289 Query: 224 DSIARRARCL 233 D +A + L Sbjct: 290 DGVAEQTAEL 299 >gi|312385101|gb|EFR29677.1| hypothetical protein AND_01156 [Anopheles darlingi] Length = 175 Score = 35.3 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 4/68 (5%) Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI-LASRVEEYACGIK---IKEDEIKK 178 I + TP T + L+ VS+++ VEEY ++ + ED + Sbjct: 6 ILVTGTPGTGKSELCKLLVEKLAPDFTWQSVSAIVSEHGFVEEYDEDLQCPVLDEDRLLD 65 Query: 179 EIEGCFIE 186 +E + Sbjct: 66 YLEPIMQQ 73 >gi|224367434|ref|YP_002601597.1| RacD1 [Desulfobacterium autotrophicum HRM2] gi|223690150|gb|ACN13433.1| RacD1 [Desulfobacterium autotrophicum HRM2] Length = 241 Score = 35.3 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Query: 64 LMFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120 M L+ + VIACNTA + ++D + P + +G V Y + Sbjct: 68 CMADMGRRLETWGADFLVIACNTAHHYYQAVQDAV--NIPVIHIVGLV-TDHLIQKYPEH 124 Query: 121 GLISILSTPA 130 I +L++PA Sbjct: 125 KKIGMLASPA 134 >gi|197105900|ref|YP_002131277.1| Asp/Glu racemase [Phenylobacterium zucineum HLK1] gi|196479320|gb|ACG78848.1| Asp/Glu racemase [Phenylobacterium zucineum HLK1] Length = 248 Score = 35.3 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 18/131 (13%) Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLISILSTPAT 131 V+ C +R S+ LG A+ AA SIL T Sbjct: 63 QNDGADAIVVVC--MGDPALHAVREAV-SVPVLGIGETAMHYAAMLGH--KFSILCTLD- 116 Query: 132 LRRTYTSNLIHSYVSQCH---IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188 RR+Y + Y + V++ +LA +E+ + + +E + Sbjct: 117 RRRSYYVDKARQYGLDSKLASVRTVNTPVLA--IED------DHASTLDRLVEAAAVAII 168 Query: 189 GKRTDVIVLAC 199 DVIVL C Sbjct: 169 QDGADVIVLGC 179 >gi|222081897|ref|YP_002541262.1| monooxygenase protein [Agrobacterium radiobacter K84] gi|221726576|gb|ACM29665.1| monooxygenase protein [Agrobacterium radiobacter K84] Length = 445 Score = 35.3 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 5/33 (15%) Query: 182 GCFIEKEGKRTDVIVLACT----HYPLIVHVFR 210 F++ K D ++L CT H+P + R Sbjct: 254 AHFLDGSKKEVDALIL-CTGYQHHFPFLPDELR 285 >gi|288961380|ref|YP_003451719.1| hydantoin racemase [Azospirillum sp. B510] gi|288913688|dbj|BAI75175.1| hydantoin racemase [Azospirillum sp. B510] Length = 234 Score = 35.3 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 15/121 (12%) Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLISILSTPATLRR-TYTS 138 VIAC + D RS +G A++ A G S+++T A R Sbjct: 74 VIAC--FDDVGLDAARS-LADAPVVGICEVAMQTAGLL--GGRFSVVTTLA--RSVPALE 126 Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 L Y + ++ + +E+ A G + ++ EI E + IVL Sbjct: 127 RLAQRYGMAGRCTIRAAGVPVLALEDPASG---AVERVRAEIRRA---MERDGAETIVLG 180 Query: 199 C 199 C Sbjct: 181 C 181 >gi|312886659|ref|ZP_07746266.1| Asp/Glu/hydantoin racemase [Mucilaginibacter paludis DSM 18603] gi|311300761|gb|EFQ77823.1| Asp/Glu/hydantoin racemase [Mucilaginibacter paludis DSM 18603] Length = 219 Score = 35.3 bits (81), Expect = 9.5, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 13/101 (12%) Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV----SQCHIHLVSSMI 157 + L + A T I +++T +T TS+L+ + + Sbjct: 93 VPVLRVDQPMADLAVQT-GKRIGVIATLSTTLEP-TSDLVQRRAALAGKEIELTSQVCEG 150 Query: 158 LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198 E G K DE+ ++ K+ DVI+LA Sbjct: 151 ---AFEALMAGDSAKHDELVADVLRHL----SKKVDVILLA 184 >gi|304410806|ref|ZP_07392423.1| periplasmic binding protein/LacI transcriptional regulator [Shewanella baltica OS183] gi|307305023|ref|ZP_07584773.1| periplasmic binding protein/LacI transcriptional regulator [Shewanella baltica BA175] gi|304350703|gb|EFM15104.1| periplasmic binding protein/LacI transcriptional regulator [Shewanella baltica OS183] gi|306912425|gb|EFN42849.1| periplasmic binding protein/LacI transcriptional regulator [Shewanella baltica BA175] Length = 213 Score = 35.3 bits (81), Expect = 9.6, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 9/101 (8%) Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL----ISILSTPATLRR 134 +IA NTA LI D + + + + V I ++S + +S+ +T + Sbjct: 114 AYIIAANTADGLIADIEQLSAAGIPVIDLVNGIATDKLTSRSLVSFADMSVAATEYIAAQ 173 Query: 135 TYTSNLIHSYVSQCHIHLVSSMI---LASRVEEYACGIKIK 172 I+ + + E+ I + Sbjct: 174 Q--REAINQESPKLKVAWFPGPKGASWVMAAEQGFIPITLN 212 >gi|288924191|ref|ZP_06418229.1| aspartate racemase [Frankia sp. EUN1f] gi|288344463|gb|EFC78954.1| aspartate racemase [Frankia sp. EUN1f] Length = 229 Score = 35.3 bits (81), Expect = 9.7, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 27/186 (14%) Query: 30 QKMRFLMPEYH----FIY---VADDV---GFPYGNWEDHALKKRLMFLFSDILDKYQPVL 79 +++R + H IY AD G+W+ A L + + D Sbjct: 24 RQVRDRLRGLHSARCLIYSVDFADIEEMQRA--GSWDAAA--NYLARCAAKLQD-GGAEC 78 Query: 80 SVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135 V+ NT +L + + L + + ++L T T+ + Sbjct: 79 IVLCTNTMHRVFDSLAAET------DVPVLHIADGTAASLRAAGVEVAALLGTQYTMEQD 132 Query: 136 YTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194 + + + + S + + + C K+ + +K ++ + GK Sbjct: 133 FYKGRLEQQGVKVVVPDADSRKIVHDIIYDELCRGKVVDSSREKYVK-IVDDLAGKGAQA 191 Query: 195 IVLACT 200 ++ CT Sbjct: 192 VIFGCT 197 >gi|225024788|ref|ZP_03713980.1| hypothetical protein EIKCOROL_01675 [Eikenella corrodens ATCC 23834] gi|224942495|gb|EEG23704.1| hypothetical protein EIKCOROL_01675 [Eikenella corrodens ATCC 23834] Length = 280 Score = 35.3 bits (81), Expect = 9.8, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Query: 87 AFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISILST-PATLRRTYTSNLIHSY 144 A TL+ +R F + AI AA T + +++++T P T T+T ++ Sbjct: 185 ASTLLYYIIRQAPFGEAHLIDNDVAIDFAAVTTPNDRVAVIATQPLTANETWTQLAVNEL 244 Query: 145 VS--QCHIHLVSSM 156 V+ I L Sbjct: 245 VAFRDGDIILRDCP 258 >gi|54022337|ref|YP_116579.1| putative ABC transporter ATP-binding protein [Nocardia farcinica IFM 10152] gi|54013845|dbj|BAD55215.1| putative ABC transporter ATP-binding protein [Nocardia farcinica IFM 10152] Length = 303 Score = 35.3 bits (81), Expect = 10.0, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 8/114 (7%) Query: 150 IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209 I ++S + +E G+ + ++ + + +VL+ TH ++ Sbjct: 153 IIGLASRAPLTLFDEPYLGL---DAVARQLFYDRLLADYAENPRTVVLS-TH---LIDEV 205 Query: 210 RQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRL 263 L V +D +A A L + F++G+P++ L Sbjct: 206 ADLL-EHVIVIDRGRVVADAAADQLRESAITVAGPVGEVDRFVAGRPELRREAL 258 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.316 0.190 0.658 Lambda K H 0.267 0.0580 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,123,673,802 Number of Sequences: 14124377 Number of extensions: 319691102 Number of successful extensions: 1081124 Number of sequences better than 10.0: 3605 Number of HSP's better than 10.0 without gapping: 4231 Number of HSP's successfully gapped in prelim test: 1743 Number of HSP's that attempted gapping in prelim test: 1063385 Number of HSP's gapped (non-prelim): 6251 length of query: 271 length of database: 4,842,793,630 effective HSP length: 137 effective length of query: 134 effective length of database: 2,907,753,981 effective search space: 389639033454 effective search space used: 389639033454 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.6 bits) S2: 81 (35.3 bits)