BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780905|ref|YP_003065318.1| glutamate racemase [Candidatus
Liberibacter asiaticus str. psy62]
(271 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780905|ref|YP_003065318.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62]
gi|254040582|gb|ACT57378.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62]
Length = 271
Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust.
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL
Sbjct: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS
Sbjct: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI
Sbjct: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH
Sbjct: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS
Sbjct: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
>gi|315122618|ref|YP_004063107.1| glutamate racemase [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496020|gb|ADR52619.1| glutamate racemase [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 271
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 190/262 (72%), Positives = 226/262 (86%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K +N I+IFDSGIGGL VLQK+RFLMPEYHFIYVADD GFPYGNWED+ALK+RL+FLF
Sbjct: 9 KKNPKNCIMIFDSGIGGLSVLQKVRFLMPEYHFIYVADDSGFPYGNWEDNALKERLLFLF 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+DIL+KY+PVLS++ACNTAFTL+KDELRSTFPSM FLGAVPAIKQA YT +GL+S+LST
Sbjct: 69 ADILEKYKPVLSIVACNTAFTLVKDELRSTFPSMLFLGAVPAIKQATVYTSTGLVSVLST 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PATLRR YT +LI SY S+C I+LVSS LAS E+Y CG +KED I++EI+GCF+EKE
Sbjct: 129 PATLRRAYTDDLIRSYASKCQINLVSSTTLASIAEDYTCGKIVKEDGIQREIQGCFLEKE 188
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G+RTDV+VLACTHYP + H+FR+LSPWPVDWLD S SIARRAR LLP I ++ + DD
Sbjct: 189 GRRTDVVVLACTHYPFMTHIFRRLSPWPVDWLDTSYSIARRARSLLPVIAMNEVGLSDDQ 248
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
+F+S KPDIAM+RLMQGFGLK
Sbjct: 249 VVFISRKPDIAMQRLMQGFGLK 270
>gi|150396728|ref|YP_001327195.1| glutamate racemase [Sinorhizobium medicae WSM419]
gi|166231055|sp|A6U9N0|MURI_SINMW RecName: Full=Glutamate racemase
gi|150028243|gb|ABR60360.1| glutamate racemase [Sinorhizobium medicae WSM419]
Length = 271
Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 148/255 (58%), Positives = 192/255 (75%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF +L ++
Sbjct: 9 ILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGRLLAEH 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR +P M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 69 DPEICIIACNTAFTLVGADLRIVYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ SQCH+ LV S LA E Y G + +D ++ EI CF+E +GKRTD++
Sbjct: 129 YTRDLIQSFASQCHVRLVGSENLARMAEAYIRGEALTDDAVRAEIAPCFVEVDGKRTDIV 188
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F SGK
Sbjct: 189 VLACTHYPFVANVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTSGK 248
Query: 256 PDIAMRRLMQGFGLK 270
PD A RRLMQGFGLK
Sbjct: 249 PDFATRRLMQGFGLK 263
>gi|15965542|ref|NP_385895.1| glutamate racemase [Sinorhizobium meliloti 1021]
gi|307302662|ref|ZP_07582418.1| glutamate racemase [Sinorhizobium meliloti BL225C]
gi|307318509|ref|ZP_07597943.1| glutamate racemase [Sinorhizobium meliloti AK83]
gi|20177981|sp|Q92PG8|MURI_RHIME RecName: Full=Glutamate racemase
gi|15074723|emb|CAC46368.1| Probable glutamate racemase [Sinorhizobium meliloti 1021]
gi|306895849|gb|EFN26601.1| glutamate racemase [Sinorhizobium meliloti AK83]
gi|306903026|gb|EFN33617.1| glutamate racemase [Sinorhizobium meliloti BL225C]
Length = 277
Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 147/255 (57%), Positives = 192/255 (75%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF +L +
Sbjct: 9 ILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGRLLAEL 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR+ +P M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 69 DPEICIIACNTAFTLVGADLRAAYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ SQCH+ LV S LA E Y G + ++ + EIE CF+E EGKRTD++
Sbjct: 129 YTRDLIQSFASQCHVRLVGSENLARMAEAYIRGDALADEAVLAEIEPCFVEAEGKRTDIV 188
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F SG+
Sbjct: 189 VLACTHYPFMSNVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTSGR 248
Query: 256 PDIAMRRLMQGFGLK 270
PD A RRLMQGFGL+
Sbjct: 249 PDFATRRLMQGFGLR 263
>gi|227822188|ref|YP_002826159.1| glutamate racemase [Sinorhizobium fredii NGR234]
gi|254766122|sp|C3MD87|MURI_RHISN RecName: Full=Glutamate racemase
gi|227341188|gb|ACP25406.1| glutamate racemase [Sinorhizobium fredii NGR234]
Length = 267
Score = 324 bits (830), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 146/254 (57%), Positives = 194/254 (76%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF D+L ++
Sbjct: 9 ILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGDLLREH 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR+ +P M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 69 DPEICIIACNTAFTLVGADLRAAYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ SQCH+ LV S LA E Y G K++++ + EI CF+E +G++TD++
Sbjct: 129 YTRDLIQSFASQCHVRLVGSENLARMAEAYIRGEKLEDEIVLAEIAPCFVEMDGRKTDIV 188
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F SGK
Sbjct: 189 VLACTHYPFMENVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTSGK 248
Query: 256 PDIAMRRLMQGFGL 269
PD A RRLMQGFGL
Sbjct: 249 PDFATRRLMQGFGL 262
>gi|328543188|ref|YP_004303297.1| glutamate racemase [polymorphum gilvum SL003B-26A1]
gi|326412934|gb|ADZ69997.1| Glutamate racemase [Polymorphum gilvum SL003B-26A1]
Length = 258
Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 141/254 (55%), Positives = 187/254 (73%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSGIGGL VL++ R LMPE F+YVADD FPYG W++ L+ RL+ LF+++ D++
Sbjct: 1 MLLFDSGIGGLTVLREARVLMPERSFVYVADDAAFPYGGWDEAPLRARLLALFAELFDRF 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
PV+S++ACNTAFTL +LR+ FP F+G VPAIK AA T+SGL+S+L+TP T+RR
Sbjct: 61 DPVVSIVACNTAFTLAGADLRAAFPDRTFVGTVPAIKPAAERTRSGLVSVLATPGTVRRA 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI S+ SQCH+ LV S LA E Y G + ++ + EI CF+EK+G RTD++
Sbjct: 121 YTRELIQSFASQCHVRLVGSQNLAPMAEAYIRGEPLSDEAVGAEIADCFLEKDGARTDIV 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + +VFR+LSPWPVDWLD +++IAR+AR L+P + + R DHA+F SG
Sbjct: 181 VLACTHYPFLANVFRRLSPWPVDWLDPAEAIARQARRLVPALAHLKDRTQTDHAVFTSGS 240
Query: 256 PDIAMRRLMQGFGL 269
PD RRLMQGFGL
Sbjct: 241 PDFPTRRLMQGFGL 254
>gi|241204880|ref|YP_002975976.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240858770|gb|ACS56437.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 267
Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 142/255 (55%), Positives = 191/255 (74%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSGIGGL VL+++R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+++
Sbjct: 11 VLVFDSGIGGLTVLREVRVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFGRLLEEH 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG++TD++
Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDEAVLTEIDQCFVEKEGRKTDIV 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P+I D A+F SG
Sbjct: 191 VLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPQIADAVHPDNFDFAVFTSGN 250
Query: 256 PDIAMRRLMQGFGLK 270
PD A RRLMQGFGL
Sbjct: 251 PDFATRRLMQGFGLS 265
>gi|116252373|ref|YP_768211.1| glutamate racemase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257021|emb|CAK08115.1| putative glutamate racemase [Rhizobium leguminosarum bv. viciae
3841]
Length = 267
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 142/256 (55%), Positives = 191/256 (74%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+++
Sbjct: 11 VLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFGRLLEEH 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG++TD++
Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDVVSDEAVLSEIDQCFVEKEGRKTDIV 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P+I D A+F SG
Sbjct: 191 VLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPQIADAVHPDNFDFAVFTSGN 250
Query: 256 PDIAMRRLMQGFGLKS 271
PD A RRLMQGFGL +
Sbjct: 251 PDFATRRLMQGFGLST 266
>gi|218663166|ref|ZP_03519096.1| glutamate racemase [Rhizobium etli IE4771]
Length = 450
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 141/256 (55%), Positives = 190/256 (74%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+ Y
Sbjct: 195 VLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLNDY 254
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 255 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 314
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+G++TD++
Sbjct: 315 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDDAVLAEIDQCFVEKDGQKTDIV 374
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P + D A+F SG+
Sbjct: 375 VLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAMFTSGQ 434
Query: 256 PDIAMRRLMQGFGLKS 271
D A RRLMQGFGLK+
Sbjct: 435 QDFATRRLMQGFGLKA 450
>gi|325293269|ref|YP_004279133.1| Glutamate racemase [Agrobacterium sp. H13-3]
gi|325061122|gb|ADY64813.1| Glutamate racemase [Agrobacterium sp. H13-3]
Length = 273
Score = 315 bits (808), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 145/255 (56%), Positives = 187/255 (73%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK R++ LF +L+ Y
Sbjct: 15 VLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEEALKARILSLFEKLLEDY 74
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 75 SPEVCIIACNTAFTLAGADLRARFPDMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 134
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ +QCH+ LV S LA E + G I ++ + EIE CFI+ +GKRTD++
Sbjct: 135 YTRDLIQSFATQCHVRLVGSENLARMAESWIRGEPISDEAVLAEIEPCFIDSDGKRTDIV 194
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P + D A+F SGK
Sbjct: 195 VLACTHYPFMANVFRRLAPWPVDWLDPAEAIARRARHLVPLPQDAEHPDGFDFAVFTSGK 254
Query: 256 PDIAMRRLMQGFGLK 270
PD A RRLMQGFGL
Sbjct: 255 PDFATRRLMQGFGLS 269
>gi|86357929|ref|YP_469821.1| glutamate racemase [Rhizobium etli CFN 42]
gi|86282031|gb|ABC91094.1| glutamate racemase (required for biosynthesis of D-glutamate and
peptidoglycan) protein [Rhizobium etli CFN 42]
Length = 266
Score = 315 bits (807), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 141/256 (55%), Positives = 188/256 (73%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSGIGGL VL++ R LMPE F+YVADD GFPYG WE+ ALK+R++ LF +L Y
Sbjct: 11 VLVFDSGIGGLTVLREARVLMPERGFVYVADDAGFPYGGWEEQALKERIIGLFGKLLQDY 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 71 HPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG +TD++
Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDEAVLAEIDQCFVEKEGYKTDIV 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P + D A+F SG
Sbjct: 191 VLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTSGN 250
Query: 256 PDIAMRRLMQGFGLKS 271
PD A RRLMQGFGL++
Sbjct: 251 PDFATRRLMQGFGLRA 266
>gi|218463622|ref|ZP_03503713.1| glutamate racemase [Rhizobium etli Kim 5]
Length = 266
Score = 314 bits (805), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 141/256 (55%), Positives = 190/256 (74%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+ Y
Sbjct: 11 VLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLNDY 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+E++G++TD++
Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDALSDDAVLAEIDQCFVERDGQKTDIV 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P I D A+F SG+
Sbjct: 191 VLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLIADAVHPDNFDFAMFTSGQ 250
Query: 256 PDIAMRRLMQGFGLKS 271
D A RRLMQGFGLK+
Sbjct: 251 QDFATRRLMQGFGLKA 266
>gi|15889167|ref|NP_354848.1| glutamate racemase [Agrobacterium tumefaciens str. C58]
gi|22001824|sp|Q8UE93|MURI_AGRT5 RecName: Full=Glutamate racemase
gi|15156983|gb|AAK87633.1| glutamate racemase [Agrobacterium tumefaciens str. C58]
Length = 273
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 144/255 (56%), Positives = 186/255 (72%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK R++ LF +L Y
Sbjct: 15 VLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEEALKTRILSLFETLLQDY 74
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 75 SPEVCIIACNTAFTLAGADLRARFPDMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 134
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ +QCH+ LV S LA E + G + ++ + EIE CFI+ +GKRTD++
Sbjct: 135 YTRDLIQSFATQCHVRLVGSENLARMAESWIRGEPVSDEAVLAEIEPCFIDSDGKRTDIV 194
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P + D A+F SGK
Sbjct: 195 VLACTHYPFMANVFRRLAPWPVDWLDPAEAIARRARHLVPLPQDAEHPDGFDFAVFTSGK 254
Query: 256 PDIAMRRLMQGFGLK 270
PD A RRLMQGFGL
Sbjct: 255 PDFATRRLMQGFGLS 269
>gi|222086155|ref|YP_002544687.1| glutamate racemase [Agrobacterium radiobacter K84]
gi|221723603|gb|ACM26759.1| glutamate racemase [Agrobacterium radiobacter K84]
Length = 266
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 138/256 (53%), Positives = 190/256 (74%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG+WE+ AL++R++ LF+ +L Y
Sbjct: 11 VLMFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGDWEEQALRERIVGLFAKLLADY 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 71 DPEICIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ +QCH+ LV S LA E Y G + +D + E+ CF+E +G++TD++
Sbjct: 131 YTRDLIQSFATQCHVRLVGSENLARIAEAYIRGGTVSDDAVLAEVGQCFVEMDGRKTDIV 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P++ D A+F SG
Sbjct: 191 VLACTHYPFMANIFRRLAPWPVDWLDPAEAIARRARSLVPQVADAVHPDTYDFAVFTSGT 250
Query: 256 PDIAMRRLMQGFGLKS 271
PD RRLMQGFGL++
Sbjct: 251 PDFPTRRLMQGFGLRA 266
>gi|209549543|ref|YP_002281460.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535299|gb|ACI55234.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 266
Score = 311 bits (797), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 143/256 (55%), Positives = 187/256 (73%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF+ +L Y
Sbjct: 11 ILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFAKLLADY 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T+RR
Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMIFVGTVPAIKPAAERTRSGLVSVLATPGTVRRA 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+G +TD++
Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDGHKTDIV 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P D A+F SG
Sbjct: 191 VLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPAAADAVHPDNFDFAVFTSGH 250
Query: 256 PDIAMRRLMQGFGLKS 271
D A RRLMQGFGL++
Sbjct: 251 QDFATRRLMQGFGLRA 266
>gi|327190530|gb|EGE57624.1| glutamate racemase protein (required for biosynthesis of
D-glutamate and peptidoglycan) [Rhizobium etli CNPAF512]
Length = 266
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 141/256 (55%), Positives = 188/256 (73%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L Y
Sbjct: 11 ILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLTDY 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+ ++TD++
Sbjct: 131 YTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTDIV 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P I D A+F SG+
Sbjct: 191 VLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLIADAVHPDNFDFAVFTSGQ 250
Query: 256 PDIAMRRLMQGFGLKS 271
D A RRLMQGFGL++
Sbjct: 251 QDFATRRLMQGFGLRA 266
>gi|190892000|ref|YP_001978542.1| glutamate racemase (required for biosynthesis of D-glutamate and
peptidoglycan) [Rhizobium etli CIAT 652]
gi|190697279|gb|ACE91364.1| glutamate racemase protein (required for biosynthesis of
D-glutamate and peptidoglycan) [Rhizobium etli CIAT 652]
Length = 266
Score = 308 bits (788), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 139/256 (54%), Positives = 188/256 (73%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L Y
Sbjct: 11 ILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLTDY 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R
Sbjct: 71 DPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRA 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ QC++ LV S LA E Y G + +D + EI+ CF+EK+ ++TD++
Sbjct: 131 YTRDLIQSFAQQCNVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTDIV 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P + D A+F SG+
Sbjct: 191 VLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTSGQ 250
Query: 256 PDIAMRRLMQGFGLKS 271
D A RRLMQGFGL++
Sbjct: 251 QDFATRRLMQGFGLRA 266
>gi|254719253|ref|ZP_05181064.1| glutamate racemase [Brucella sp. 83/13]
gi|265984252|ref|ZP_06096987.1| glutamate racemase [Brucella sp. 83/13]
gi|306838003|ref|ZP_07470861.1| glutamate racemase [Brucella sp. NF 2653]
gi|264662844|gb|EEZ33105.1| glutamate racemase [Brucella sp. 83/13]
gi|306406927|gb|EFM63148.1| glutamate racemase [Brucella sp. NF 2653]
Length = 277
Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 141/269 (52%), Positives = 196/269 (72%), Gaps = 3/269 (1%)
Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+
Sbjct: 8 SFPAKPAIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL
Sbjct: 68 RIIELFGEFITNYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I
Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAP 187
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241
CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + +
Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
DD A F S KPD A+RRLMQGFGL+
Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|306840341|ref|ZP_07473112.1| glutamate racemase [Brucella sp. BO2]
gi|306844094|ref|ZP_07476688.1| glutamate racemase [Brucella sp. BO1]
gi|306275537|gb|EFM57269.1| glutamate racemase [Brucella sp. BO1]
gi|306289688|gb|EFM60880.1| glutamate racemase [Brucella sp. BO2]
Length = 277
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/269 (52%), Positives = 196/269 (72%), Gaps = 3/269 (1%)
Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+
Sbjct: 8 SFPAKPAIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL
Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I
Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAP 187
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241
CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + +
Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
DD A F S KPD A+RRLMQGFGL+
Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|17987078|ref|NP_539712.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|23502072|ref|NP_698199.1| glutamate racemase [Brucella suis 1330]
gi|62290106|ref|YP_221899.1| glutamate racemase [Brucella abortus bv. 1 str. 9-941]
gi|82700029|ref|YP_414603.1| glutamate racemase [Brucella melitensis biovar Abortus 2308]
gi|161619150|ref|YP_001593037.1| glutamate racemase [Brucella canis ATCC 23365]
gi|189024344|ref|YP_001935112.1| glutamate racemase [Brucella abortus S19]
gi|225627664|ref|ZP_03785701.1| glutamate racemase [Brucella ceti str. Cudo]
gi|225852691|ref|YP_002732924.1| glutamate racemase [Brucella melitensis ATCC 23457]
gi|237815612|ref|ZP_04594609.1| glutamate racemase [Brucella abortus str. 2308 A]
gi|254689415|ref|ZP_05152669.1| glutamate racemase [Brucella abortus bv. 6 str. 870]
gi|254693900|ref|ZP_05155728.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya]
gi|254697550|ref|ZP_05159378.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59]
gi|254704480|ref|ZP_05166308.1| glutamate racemase [Brucella suis bv. 3 str. 686]
gi|254706624|ref|ZP_05168452.1| glutamate racemase [Brucella pinnipedialis M163/99/10]
gi|254710266|ref|ZP_05172077.1| glutamate racemase [Brucella pinnipedialis B2/94]
gi|254714263|ref|ZP_05176074.1| glutamate racemase [Brucella ceti M644/93/1]
gi|254717699|ref|ZP_05179510.1| glutamate racemase [Brucella ceti M13/05/1]
gi|254730444|ref|ZP_05189022.1| glutamate racemase [Brucella abortus bv. 4 str. 292]
gi|256031760|ref|ZP_05445374.1| glutamate racemase [Brucella pinnipedialis M292/94/1]
gi|256044845|ref|ZP_05447749.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1]
gi|256061275|ref|ZP_05451425.1| glutamate racemase [Brucella neotomae 5K33]
gi|256113750|ref|ZP_05454554.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether]
gi|256159930|ref|ZP_05457648.1| glutamate racemase [Brucella ceti M490/95/1]
gi|256255161|ref|ZP_05460697.1| glutamate racemase [Brucella ceti B1/94]
gi|256257661|ref|ZP_05463197.1| glutamate racemase [Brucella abortus bv. 9 str. C68]
gi|256263818|ref|ZP_05466350.1| glutamate racemase [Brucella melitensis bv. 2 str. 63/9]
gi|260168894|ref|ZP_05755705.1| glutamate racemase [Brucella sp. F5/99]
gi|260546655|ref|ZP_05822394.1| glutamate racemase [Brucella abortus NCTC 8038]
gi|260565553|ref|ZP_05836037.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|260566276|ref|ZP_05836746.1| glutamate racemase [Brucella suis bv. 4 str. 40]
gi|260754937|ref|ZP_05867285.1| glutamate racemase [Brucella abortus bv. 6 str. 870]
gi|260758153|ref|ZP_05870501.1| glutamate racemase [Brucella abortus bv. 4 str. 292]
gi|260761979|ref|ZP_05874322.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883947|ref|ZP_05895561.1| glutamate racemase [Brucella abortus bv. 9 str. C68]
gi|261214189|ref|ZP_05928470.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya]
gi|261219542|ref|ZP_05933823.1| glutamate racemase [Brucella ceti M13/05/1]
gi|261222358|ref|ZP_05936639.1| glutamate racemase [Brucella ceti B1/94]
gi|261314084|ref|ZP_05953281.1| glutamate racemase [Brucella pinnipedialis M163/99/10]
gi|261317828|ref|ZP_05957025.1| glutamate racemase [Brucella pinnipedialis B2/94]
gi|261322037|ref|ZP_05961234.1| glutamate racemase [Brucella ceti M644/93/1]
gi|261325282|ref|ZP_05964479.1| glutamate racemase [Brucella neotomae 5K33]
gi|261755160|ref|ZP_05998869.1| glutamate racemase [Brucella suis bv. 3 str. 686]
gi|261758384|ref|ZP_06002093.1| glutamate racemase [Brucella sp. F5/99]
gi|265988858|ref|ZP_06101415.1| glutamate racemase [Brucella pinnipedialis M292/94/1]
gi|265991273|ref|ZP_06103830.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1]
gi|265995109|ref|ZP_06107666.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether]
gi|265998323|ref|ZP_06110880.1| glutamate racemase [Brucella ceti M490/95/1]
gi|294852530|ref|ZP_06793203.1| glutamate racemase [Brucella sp. NVSL 07-0026]
gi|297248502|ref|ZP_06932220.1| glutamate racemase [Brucella abortus bv. 5 str. B3196]
gi|54037864|sp|P63632|MURI_BRUSU RecName: Full=Glutamate racemase
gi|54041256|sp|P63631|MURI_BRUME RecName: Full=Glutamate racemase
gi|75496705|sp|Q57CU6|MURI_BRUAB RecName: Full=Glutamate racemase
gi|123547536|sp|Q2YRV4|MURI_BRUA2 RecName: Full=Glutamate racemase
gi|189082953|sp|A9M5L1|MURI_BRUC2 RecName: Full=Glutamate racemase
gi|229486232|sp|B2S641|MURI_BRUA1 RecName: Full=Glutamate racemase
gi|254766109|sp|C0RJG2|MURI_BRUMB RecName: Full=Glutamate racemase
gi|17982736|gb|AAL51976.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|23348029|gb|AAN30114.1| glutamate racemase [Brucella suis 1330]
gi|62196238|gb|AAX74538.1| MurI, glutamate racemase [Brucella abortus bv. 1 str. 9-941]
gi|82616130|emb|CAJ11173.1| Asp/Glu racemase [Brucella melitensis biovar Abortus 2308]
gi|161335961|gb|ABX62266.1| glutamate racemase [Brucella canis ATCC 23365]
gi|189019916|gb|ACD72638.1| Asp/Glu racemase [Brucella abortus S19]
gi|225617669|gb|EEH14714.1| glutamate racemase [Brucella ceti str. Cudo]
gi|225641056|gb|ACO00970.1| glutamate racemase [Brucella melitensis ATCC 23457]
gi|237788910|gb|EEP63121.1| glutamate racemase [Brucella abortus str. 2308 A]
gi|260095705|gb|EEW79582.1| glutamate racemase [Brucella abortus NCTC 8038]
gi|260151621|gb|EEW86715.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|260155794|gb|EEW90874.1| glutamate racemase [Brucella suis bv. 4 str. 40]
gi|260668471|gb|EEX55411.1| glutamate racemase [Brucella abortus bv. 4 str. 292]
gi|260672411|gb|EEX59232.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675045|gb|EEX61866.1| glutamate racemase [Brucella abortus bv. 6 str. 870]
gi|260873475|gb|EEX80544.1| glutamate racemase [Brucella abortus bv. 9 str. C68]
gi|260915796|gb|EEX82657.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya]
gi|260920942|gb|EEX87595.1| glutamate racemase [Brucella ceti B1/94]
gi|260924631|gb|EEX91199.1| glutamate racemase [Brucella ceti M13/05/1]
gi|261294727|gb|EEX98223.1| glutamate racemase [Brucella ceti M644/93/1]
gi|261297051|gb|EEY00548.1| glutamate racemase [Brucella pinnipedialis B2/94]
gi|261301262|gb|EEY04759.1| glutamate racemase [Brucella neotomae 5K33]
gi|261303110|gb|EEY06607.1| glutamate racemase [Brucella pinnipedialis M163/99/10]
gi|261738368|gb|EEY26364.1| glutamate racemase [Brucella sp. F5/99]
gi|261744913|gb|EEY32839.1| glutamate racemase [Brucella suis bv. 3 str. 686]
gi|262552791|gb|EEZ08781.1| glutamate racemase [Brucella ceti M490/95/1]
gi|262766222|gb|EEZ12011.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether]
gi|263002057|gb|EEZ14632.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093947|gb|EEZ17881.1| glutamate racemase [Brucella melitensis bv. 2 str. 63/9]
gi|264661055|gb|EEZ31316.1| glutamate racemase [Brucella pinnipedialis M292/94/1]
gi|294821119|gb|EFG38118.1| glutamate racemase [Brucella sp. NVSL 07-0026]
gi|297175671|gb|EFH35018.1| glutamate racemase [Brucella abortus bv. 5 str. B3196]
gi|326409213|gb|ADZ66278.1| Asp/Glu racemase [Brucella melitensis M28]
gi|326538922|gb|ADZ87137.1| glutamate racemase [Brucella melitensis M5-90]
Length = 277
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/269 (52%), Positives = 196/269 (72%), Gaps = 3/269 (1%)
Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+
Sbjct: 8 SFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL
Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I
Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAP 187
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241
CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + +
Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
DD A F S KPD A+RRLMQGFGL+
Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|163843460|ref|YP_001627864.1| glutamate racemase [Brucella suis ATCC 23445]
gi|189030357|sp|B0CGZ3|MURI_BRUSI RecName: Full=Glutamate racemase
gi|163674183|gb|ABY38294.1| glutamate racemase [Brucella suis ATCC 23445]
Length = 277
Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/269 (52%), Positives = 196/269 (72%), Gaps = 3/269 (1%)
Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+
Sbjct: 8 SFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL
Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGMVPAIKPAAERTSSGL 127
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I
Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAP 187
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241
CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + +
Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
DD A F S KPD A+RRLMQGFGL+
Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|256369619|ref|YP_003107129.1| glutamate racemase [Brucella microti CCM 4915]
gi|255999781|gb|ACU48180.1| glutamate racemase [Brucella microti CCM 4915]
Length = 277
Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 141/269 (52%), Positives = 195/269 (72%), Gaps = 3/269 (1%)
Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+
Sbjct: 8 SFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL
Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+S+L+TP T++R YT +LI S+ S+CH+ LV + LA E + G E + +I
Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAVIAEAHIRGESFDEALVMAQIAP 187
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241
CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + +
Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
DD A F S KPD A+RRLMQGFGL+
Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|148560126|ref|YP_001259114.1| glutamate racemase [Brucella ovis ATCC 25840]
gi|166231028|sp|A5VQW7|MURI_BRUO2 RecName: Full=Glutamate racemase
gi|148371383|gb|ABQ61362.1| glutamate racemase [Brucella ovis ATCC 25840]
Length = 277
Score = 304 bits (779), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 141/269 (52%), Positives = 194/269 (72%), Gaps = 3/269 (1%)
Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+
Sbjct: 8 SFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKR 67
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL
Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+S+L+TP T++R YT +LI S+ S+CH+ LV LA+ E + G E + +I
Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGVDGLAAIAEAHIRGESFDEALVMAQIAP 187
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241
CFIEK GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + +
Sbjct: 188 CFIEKGGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
DD A F S KPD A+RRLMQGFGL+
Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|222148423|ref|YP_002549380.1| glutamate racemase [Agrobacterium vitis S4]
gi|221735411|gb|ACM36374.1| glutamate racemase [Agrobacterium vitis S4]
Length = 269
Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 139/255 (54%), Positives = 185/255 (72%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSGIGGL VL++ R LMPE FIY+ADD GFPYGNWE+ LK R++ LF+ +L +Y
Sbjct: 11 ILVFDSGIGGLTVLREARVLMPERGFIYIADDAGFPYGNWEEEPLKARIVSLFASLLAQY 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P ++AC+TAFTL LR FP M F+G VPAIK AA ++SGLIS+L+TP T++R
Sbjct: 71 DPEAVIVACSTAFTLAGAALREAFPGMRFIGTVPAIKPAAERSRSGLISVLATPGTVKRA 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ SQC ++LV S LA E Y G ++E +K EI CFIEK+G +TD++
Sbjct: 131 YTRDLIQSFASQCEVNLVGSQHLARLAEAYIRGESVEEAVLKAEIAPCFIEKQGAKTDIV 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP + +VFR+L+PWPVDWLD +++IAR+AR L+P ++ D A+F SG+
Sbjct: 191 VLACTHYPFLANVFRKLAPWPVDWLDPAEAIARQARRLVPVVDEGAHSDDYDFAVFTSGQ 250
Query: 256 PDIAMRRLMQGFGLK 270
P + RLMQGFGL+
Sbjct: 251 PVFSTHRLMQGFGLR 265
>gi|254701935|ref|ZP_05163763.1| glutamate racemase [Brucella suis bv. 5 str. 513]
gi|261752501|ref|ZP_05996210.1| glutamate racemase [Brucella suis bv. 5 str. 513]
gi|261742254|gb|EEY30180.1| glutamate racemase [Brucella suis bv. 5 str. 513]
Length = 277
Score = 302 bits (773), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 140/269 (52%), Positives = 195/269 (72%), Gaps = 3/269 (1%)
Query: 5 NYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGN E+ ALK+
Sbjct: 8 SFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNREEEALKR 67
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL
Sbjct: 68 RIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGL 127
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I
Sbjct: 128 VSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAP 187
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQ 241
CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + +
Sbjct: 188 CFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDE 247
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
DD A F S KPD A+RRLMQGFGL+
Sbjct: 248 FHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|239832083|ref|ZP_04680412.1| glutamate racemase [Ochrobactrum intermedium LMG 3301]
gi|239824350|gb|EEQ95918.1| glutamate racemase [Ochrobactrum intermedium LMG 3301]
Length = 278
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/258 (53%), Positives = 187/258 (72%), Gaps = 1/258 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IL+FDSGIGGL VL++ R LMP+ F+YVADD GFPYG WE+ AL+ R++ LF ++
Sbjct: 18 ERPILVFDSGIGGLTVLREARVLMPDRRFVYVADDAGFPYGGWEEDALRARIVQLFGKLI 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P ++VIACNTA TL+ D+LR+ +P++ F+G VPAIK AA T SGL+S+L+TP T+
Sbjct: 78 ADYDPEIAVIACNTASTLVLDDLRNAYPAVPFVGTVPAIKPAAERTSSGLVSVLATPGTV 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
RR YT +LI S+ SQCH+ LV + LA+ E + G KI E + +I CFIE++G RT
Sbjct: 138 RRAYTRDLIQSFASQCHVRLVGADQLAAVAEAHIRGEKIDEALVVAQIAPCFIEQDGNRT 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALF 251
D++VLACTHYP + +VFR+L+PWPVDWLD +++IARR LL PR + +D A+
Sbjct: 198 DIVVLACTHYPFLANVFRRLAPWPVDWLDPAEAIARRTVSLLKPRRAVEELHHHNDLAVV 257
Query: 252 LSGKPDIAMRRLMQGFGL 269
S PD A+RRLMQGFGL
Sbjct: 258 TSQNPDYAIRRLMQGFGL 275
>gi|153009326|ref|YP_001370541.1| glutamate racemase [Ochrobactrum anthropi ATCC 49188]
gi|166231047|sp|A6X0F8|MURI_OCHA4 RecName: Full=Glutamate racemase
gi|151561214|gb|ABS14712.1| glutamate racemase [Ochrobactrum anthropi ATCC 49188]
Length = 278
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 138/258 (53%), Positives = 188/258 (72%), Gaps = 1/258 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IL+FDSGIGGL VL++ R LMP+ F+YVADD GFPYG WE+ AL++R++ LF ++
Sbjct: 18 ERPILVFDSGIGGLTVLREARVLMPDRRFVYVADDAGFPYGGWEEDALRERIVELFGKLI 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P ++VIACNTA TL+ D+LR +PS+ F+G VPAIK AA T SGL+S+L+TP T+
Sbjct: 78 AAYDPEIAVIACNTASTLVLDDLRQAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGTV 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
RR YT +LI S+ +QCH+ LV + LA+ E + G +I E + ++I CFIE++G RT
Sbjct: 138 RRAYTRDLIQSFATQCHVRLVGADQLATVAEAHIRGERIDEALVVEQIAPCFIEQDGNRT 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALF 251
D++VLACTHYP + +VFR+L+PWPVDWLD +++IARR LL PR + +D A+
Sbjct: 198 DIVVLACTHYPFLANVFRRLAPWPVDWLDPAEAIARRTVSLLKPRRADEELHHHNDLAVV 257
Query: 252 LSGKPDIAMRRLMQGFGL 269
S PD A+RRLMQGFGL
Sbjct: 258 TSRNPDYAIRRLMQGFGL 275
>gi|260460843|ref|ZP_05809093.1| glutamate racemase [Mesorhizobium opportunistum WSM2075]
gi|259033420|gb|EEW34681.1| glutamate racemase [Mesorhizobium opportunistum WSM2075]
Length = 275
Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 131/256 (51%), Positives = 182/256 (71%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF+ +LD
Sbjct: 4 QPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILELFARLLD 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ PV+SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T++
Sbjct: 64 RFSPVISVIACNTASTLVIDALRDRFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTVK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E +G+RTD
Sbjct: 124 RQYTRDLISKWAQKCHVRLVGSDRLAGLAEAYMREGFVDEEAVRAEITPCFMEHDGRRTD 183
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F S
Sbjct: 184 IVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFTS 243
Query: 254 GKPDIAMRRLMQGFGL 269
GK D A+ RLMQGFGL
Sbjct: 244 GKADFAVSRLMQGFGL 259
>gi|110633622|ref|YP_673830.1| glutamate racemase [Mesorhizobium sp. BNC1]
gi|110284606|gb|ABG62665.1| glutamate racemase [Chelativorans sp. BNC1]
Length = 274
Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 129/257 (50%), Positives = 182/257 (70%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ IL FDSGIGGL V+++ R L+PE+ ++YVADD FPYG WE+ AL+ RL+ LF ++
Sbjct: 8 SPILFFDSGIGGLSVVKEARVLLPEHPYVYVADDAAFPYGAWEEGALRARLVELFGSLIA 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P L VIACNTA TL +LR+ +PS F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 68 RFAPSLIVIACNTASTLAIADLRAAYPSQLFVGTVPAIKPAAERTRSGLVSVLATPGTVK 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI +Y ++CH+ LV S LAS E+Y + E+ ++KEIE CF+E++G+RTD
Sbjct: 128 RQYTRDLISAYAAKCHVRLVGSENLASLAEKYMREGFVDEEAVRKEIEPCFMERDGQRTD 187
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP +V+ R+++PWPVDW+D S++IARRA L + D A F S
Sbjct: 188 IVVLACTHYPFLVNRMRKMAPWPVDWIDTSEAIARRALTLAETLPPPARPDLPDRACFTS 247
Query: 254 GKPDIAMRRLMQGFGLK 270
G P ++RRL GFG +
Sbjct: 248 GNPPASLRRLASGFGFR 264
>gi|114707294|ref|ZP_01440191.1| glutamate racemase [Fulvimarina pelagi HTCC2506]
gi|114537175|gb|EAU40302.1| glutamate racemase [Fulvimarina pelagi HTCC2506]
Length = 262
Score = 285 bits (729), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 131/256 (51%), Positives = 182/256 (71%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
ILI DSG+GGL VL++ R LMP+ F+YVADD GFPYGNWE+ AL+ RL+ LF D++ +
Sbjct: 6 ILILDSGVGGLTVLREARVLMPDRRFVYVADDAGFPYGNWEEDALRDRLVALFGDLIVAH 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P+ VIACNTA TL + LR ++P M F+G VPAIK AA T+SGL+S+L+TP T+RR
Sbjct: 66 EPLACVIACNTASTLALNALRQSYPRMKFVGTVPAIKPAAERTRSGLVSVLATPGTVRRQ 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI + S+ + LV S+ LAS E Y G + E + EI CFIE+ G+RTD++
Sbjct: 126 YTQDLIDQWASRVSVKLVGSVALASLAERYMRGGFVDEQAVLAEIAPCFIEENGRRTDIV 185
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTHYP +V+ R+++PWPVDWLD +++IAR+A ++ T D A+F SG
Sbjct: 186 VLACTHYPFLVNRMRKMAPWPVDWLDPAEAIARQADRVVGDAGTRSMHGDFDPAVFTSGA 245
Query: 256 PDIAMRRLMQGFGLKS 271
PD A +R+++GFGL++
Sbjct: 246 PDYATQRIVRGFGLRT 261
>gi|13470360|ref|NP_101926.1| glutamate racemase [Mesorhizobium loti MAFF303099]
gi|14021099|dbj|BAB47712.1| glutamate racemase [Mesorhizobium loti MAFF303099]
Length = 276
Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 131/256 (51%), Positives = 179/256 (69%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF +LD
Sbjct: 18 QPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILDLFVKLLD 77
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P +SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T++
Sbjct: 78 RFAPAISVIACNTASTLVIDALRERFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTVK 137
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E EG RTD
Sbjct: 138 RQYTRDLISKWAQKCHVRLVGSDRLAGLAEVYMREGFVDEEAVRAEIAPCFMEHEGLRTD 197
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F S
Sbjct: 198 IVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFTS 257
Query: 254 GKPDIAMRRLMQGFGL 269
GK D A+ RLMQGFGL
Sbjct: 258 GKTDFAIGRLMQGFGL 273
>gi|20177985|sp|Q98NP9|MURI_RHILO RecName: Full=Glutamate racemase
Length = 262
Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/256 (51%), Positives = 179/256 (69%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF +LD
Sbjct: 4 QPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILDLFVKLLD 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P +SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T++
Sbjct: 64 RFAPAISVIACNTASTLVIDALRERFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTVK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E EG RTD
Sbjct: 124 RQYTRDLISKWAQKCHVRLVGSDRLAGLAEVYMREGFVDEEAVRAEIAPCFMEHEGLRTD 183
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F S
Sbjct: 184 IVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFTS 243
Query: 254 GKPDIAMRRLMQGFGL 269
GK D A+ RLMQGFGL
Sbjct: 244 GKTDFAIGRLMQGFGL 259
>gi|307945604|ref|ZP_07660940.1| glutamate racemase [Roseibium sp. TrichSKD4]
gi|307771477|gb|EFO30702.1| glutamate racemase [Roseibium sp. TrichSKD4]
Length = 267
Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 132/257 (51%), Positives = 181/257 (70%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ILIFDSGIGGL VL+++R L+P +YVADD GFP G+WE+ LK+RL+ LF +L
Sbjct: 4 RQPILIFDSGIGGLTVLRELRLLLPYETILYVADDAGFPLGDWEEPPLKERLLQLFDGLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++QP SVIACNTAFTL + LR+ P AF+G VPAIK AA T SGL+S+L+TP T+
Sbjct: 64 VRFQPKASVIACNTAFTLAGEALRAAQPDHAFVGTVPAIKPAAERTASGLVSVLATPGTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
RR YT NLI S+ +QCH+ LV S LA+ E+ G + ++ +K EI+ CF+EK+G+RT
Sbjct: 124 RRAYTKNLIDSFATQCHVRLVGSDALAAHAEQELRGEPVSDEALKAEIDACFLEKDGRRT 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D++VLACTHYP + + FR+L+PWPVDWLD + +IAR+ +L + D A F
Sbjct: 184 DIVVLACTHYPFLANRFRKLAPWPVDWLDPAGAIARQVVRVLGDDLYLEPVSVPDTAHFT 243
Query: 253 SGKPDIAMRRLMQGFGL 269
SG+ +++RL+ GFGL
Sbjct: 244 SGQSTASLKRLLAGFGL 260
>gi|49475603|ref|YP_033644.1| glutamate racemase [Bartonella henselae str. Houston-1]
gi|81647897|sp|Q6G3D5|MURI_BARHE RecName: Full=Glutamate racemase
gi|49238410|emb|CAF27637.1| Glutamate racemase [Bartonella henselae str. Houston-1]
Length = 270
Score = 281 bits (718), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 133/259 (51%), Positives = 181/259 (69%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL VL+++R L+PE FIYVADDVGFPYGNWE++ LK R++ +F+++L
Sbjct: 3 ERPVLFFDSGIGGLTVLREVRSLIPEKQFIYVADDVGFPYGNWEENVLKNRILKIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P L VIACNT TL+ +LR FP + F+G VPAIK AA T+SG IS+L+TP T+
Sbjct: 63 TVYNPALCVIACNTVSTLMIADLRERFPHILFVGTVPAIKLAAEQTKSGFISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+RTYT LI+S+ QCH+ LV S LA E Y G + +E++ EI CF++K GK T
Sbjct: 123 KRTYTHELINSFAGQCHVQLVGSEKLAGFAENYLRGQSVDLEELRNEILPCFVKKNGKHT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D+IVLACTHYP ++H FR+ + W V W+D S +IA+R R LLP+ HQT + ++D ALF
Sbjct: 183 DIIVLACTHYPFLLHFFREQALWHVQWIDPSKAIAKRTRSLLPQRIHHQTVKKYEDFALF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + +RL++ F L
Sbjct: 243 TSQNITSSTKRLLKEFSLN 261
>gi|218516359|ref|ZP_03513199.1| glutamate racemase [Rhizobium etli 8C-3]
Length = 236
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 171/236 (72%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MPE FIYVADD GFPYG WE+ ALK+R++ LF +L Y P + +IACNTAFTL+ +L
Sbjct: 1 MPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLTDYDPEVCIIACNTAFTLVGADL 60
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R YT +LI S+ QC++ LV S
Sbjct: 61 RAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRAYTRDLIQSFAQQCNVRLVGS 120
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
LA E Y G + +D + EI+ CF+EK+ ++TD++VLACTHYP + ++FR+++PW
Sbjct: 121 ENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTDIVVLACTHYPFMANLFRRIAPW 180
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
PVDWLD +++IARRAR L+P + D A+F SG+ D A RRLMQGFGL++
Sbjct: 181 PVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTSGQQDFATRRLMQGFGLRA 236
>gi|319898917|ref|YP_004159010.1| Glutamate racemase [Bartonella clarridgeiae 73]
gi|319402881|emb|CBI76432.1| Glutamate racemase [Bartonella clarridgeiae 73]
Length = 273
Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 179/262 (68%), Gaps = 4/262 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL VL+K+R +PEY FIY+ADD FPYG WE+ L++R++ +F+ +L
Sbjct: 3 EKPLLFFDSGIGGLTVLRKVRLFVPEYQFIYIADDAAFPYGVWEEEILRRRILKIFAYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y PVL VIACNTA TLI ++LR FP++ F+G VPAIK AA T+SG+IS+L+TP T+
Sbjct: 63 KLYNPVLCVIACNTASTLIIEDLRQEFPNICFVGTVPAIKLAAEQTKSGIISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI+S+ QCH+ LV S LA E Y G I E+E++ EI CFIEK GK T
Sbjct: 123 KRAYTHELINSFAGQCHVQLVGSEKLAGFAENYLRGYPINEEELRHEILPCFIEKNGKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRVFDDH 248
D++VLACTHYP ++++FR+ + WPVDW+D + ++A+R R LLP ++ + D
Sbjct: 183 DIVVLACTHYPFLINLFREQALWPVDWIDPAKAVAKRIRSLLPILPIKMQNKNMKKHKDF 242
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
ALF S + L+Q F L
Sbjct: 243 ALFTSQNISSSTEYLLQKFQLN 264
>gi|118588604|ref|ZP_01546012.1| glutamate racemase [Stappia aggregata IAM 12614]
gi|118438590|gb|EAV45223.1| glutamate racemase [Stappia aggregata IAM 12614]
Length = 264
Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/258 (50%), Positives = 174/258 (67%), Gaps = 1/258 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+L FDSG+GGL VL++ R+L+P +YVADD FP G W + LK R++ LF D++
Sbjct: 4 SGPVLFFDSGLGGLTVLREARYLLPYEPLLYVADDAAFPIGRWPEAELKARIVSLFGDLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ P VIACNTAFTL D LR P + F+G VPAIK AA T SGLIS+L+TP T+
Sbjct: 64 AEHGPKAVVIACNTAFTLAGDALREAHPDVPFVGTVPAIKPAAERTSSGLISVLATPGTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
RRTYT +LI S+ SQCH+ LV S +LA E++ G + +D + EI CF+E++GKRT
Sbjct: 124 RRTYTRSLIDSFASQCHVRLVGSDMLAELAEKHLRGETVSDDALLPEIADCFLEQDGKRT 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPRINTHQTRVFDDHALF 251
D++VLACTHYP + + FR+++PWPVDWLD +++IAR+ R L H R D A+F
Sbjct: 184 DIVVLACTHYPFLANRFRKIAPWPVDWLDPAEAIARQLVRVLGEEAARHPARNLPDRAIF 243
Query: 252 LSGKPDIAMRRLMQGFGL 269
SG D + RL+ GFGL
Sbjct: 244 TSGSKDPGLARLLAGFGL 261
>gi|90420932|ref|ZP_01228837.1| glutamate racemase [Aurantimonas manganoxydans SI85-9A1]
gi|90334907|gb|EAS48679.1| glutamate racemase [Aurantimonas manganoxydans SI85-9A1]
Length = 268
Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 132/264 (50%), Positives = 184/264 (69%), Gaps = 7/264 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL+++R MP+ FIYVADD GFPYG+WE+ L R++ LF+++
Sbjct: 1 MNAPILVFDSGIGGLTVLRELRTAMPDRRFIYVADDAGFPYGDWEEEPLVARILDLFAEL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+D Y+P L+VIACNTA TL+ +LR+ F ++ F+G VPAIK A T+SGL+S+L+TP T
Sbjct: 61 IDTYEPSLAVIACNTASTLVLPQLRARF-AIPFVGTVPAIKPATERTRSGLVSVLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILA-----SRVEEYACGIKIKEDEIKKEIEGCFIE 186
+RR YT +L+ ++ + C + LV S LA S ++ A G + +D + EI CF+E
Sbjct: 120 VRRVYTRDLVEAFATHCEVRLVGSPELARLAERSLLDSEASGDQELDDAMAAEIAPCFVE 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
G+RTD++VLACTHYPLI + FR+L+PWPVDWLD +++IARRAR L + F
Sbjct: 180 AGGQRTDIVVLACTHYPLIANHFRRLAPWPVDWLDPAEAIARRARSLCKPGSGELPEGF- 238
Query: 247 DHALFLSGKPDIAMRRLMQGFGLK 270
D A F G P MRRL++GFGL+
Sbjct: 239 DSAHFTGGAPGYQMRRLVRGFGLE 262
>gi|163759593|ref|ZP_02166678.1| glutamate racemase [Hoeflea phototrophica DFL-43]
gi|162283190|gb|EDQ33476.1| glutamate racemase [Hoeflea phototrophica DFL-43]
Length = 263
Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 182/260 (70%), Gaps = 1/260 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +++FDSGIGGL VL++ R +MP F+YVADD GFPYG WE+ AL+ R++ LF+ ++
Sbjct: 3 ERPVVVFDSGIGGLSVLREARVIMPGRRFVYVADDAGFPYGAWEEGALRDRIVGLFAGLI 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K+ P L++IACNTA T++ LR+ +P + F+G VPAIK AA T+SGL+S+L+TP T+
Sbjct: 63 EKHNPALALIACNTASTIVMPALRAAYPELPFVGTVPAIKPAAERTKSGLVSVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI Y + H+ LV S LA+ E Y + E +K EI+ CF+E++G++T
Sbjct: 123 KRQYTRDLIRDYADKVHVRLVGSENLAALAETYMRKGFVDEAAVKAEIDPCFVERDGQKT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTHQTRVFDDHALF 251
D++VLACTH+P +V+ R+++PWPVDW+D +++IARRA ++ + H D +F
Sbjct: 183 DIVVLACTHFPFLVNRMRKMAPWPVDWIDPAEAIARRALAIVDTLPGGHALPDARDSVVF 242
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
SG PD + RLM GFGL +
Sbjct: 243 TSGNPDYSALRLMHGFGLTA 262
>gi|240850640|ref|YP_002972040.1| glutamate racemase [Bartonella grahamii as4aup]
gi|240267763|gb|ACS51351.1| glutamate racemase [Bartonella grahamii as4aup]
Length = 272
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/261 (48%), Positives = 177/261 (67%), Gaps = 3/261 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL V ++ R L+PE FIYVADD GFPYGNW+++ LK+R++ +F+++L
Sbjct: 3 ERPVLFFDSGIGGLTVFREARILIPEMQFIYVADDAGFPYGNWKENILKERILKIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y P L VIACNT TL+ +LR F + F+G VPAIK AA T+SG IS+L+TP T+
Sbjct: 63 TRYNPALCVIACNTVSTLMMADLRQNFSHVPFVGTVPAIKSAAEQTKSGFISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT+ LI+S+ QCH+ LV S LA E+Y G I +E++KEI CF+EK G+ T
Sbjct: 123 KRAYTNELINSFAGQCHVQLVGSKKLAGFAEDYLRGKSINSEELRKEILPCFVEKNGQYT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDDHA 249
DVIVLACTHYP +++ FR+ + W V+W+D + +IA+ R LLP +++ + + D A
Sbjct: 183 DVIVLACTHYPFLINFFREHALWSVEWIDPAKAIAKHIRSLLPLSEKVHDQYIKKYQDFA 242
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
L S L +GFGLK
Sbjct: 243 LLTSKNITSLTENLFKGFGLK 263
>gi|319408556|emb|CBI82209.1| Glutamate racemase [Bartonella schoenbuchensis R1]
Length = 270
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/258 (50%), Positives = 177/258 (68%), Gaps = 1/258 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL V++++R L+ E+ FIYVADD GFPYG W + ALK+R++ +F+++L
Sbjct: 3 ERPLLFFDSGIGGLTVVEEVRALISEFQFIYVADDAGFPYGIWSEDALKQRILKIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P+L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SGLIS+L+TP T+
Sbjct: 63 KLYNPILCVIACNTASTLVITDLRRKFPNILFVGTVPAIKLAAKKTKSGLISVLATPGTI 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI S+ +QCH+ LV S LA E Y G I + E++ EI CF+EK GK T
Sbjct: 123 QRAYTHKLIDSFANQCHVQLVGSTKLAGFAENYLRGNPIDDKELRHEILPCFVEKNGKYT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTHQTRVFDDHALF 251
DVIVLACTHYP ++++F + + WPV W+D + +IARR R LL I + +D ALF
Sbjct: 183 DVIVLACTHYPFLINLFHKQALWPVSWIDPAKAIARRTRSLLLEEIQNKNIKKHEDCALF 242
Query: 252 LSGKPDIAMRRLMQGFGL 269
S +A L+Q FG
Sbjct: 243 TSQTIGVATEHLLQKFGF 260
>gi|319784057|ref|YP_004143533.1| glutamate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169945|gb|ADV13483.1| glutamate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 266
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/261 (49%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IL+FDSGIGGL VL++ R LMP+ FIYVADD FPYG WE+ AL+ ++ LF +L
Sbjct: 3 ERPILMFDSGIGGLTVLREARVLMPDRRFIYVADDAAFPYGAWEEPALRVHILELFGKLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++ P +SVIACNTA TL+ D LR FP F+G VPAIK AA T+SGL+S+L+TP T+
Sbjct: 63 ERFAPAISVIACNTASTLVIDALRDRFPEHPFVGMVPAIKPAAERTRSGLVSVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E++ RT
Sbjct: 123 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEIYMREGFVDEEAVRAEITPCFVERDALRT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF----DDH 248
D++VLACTHYP + + R+ +PWPVDWLD +++IARRA LL I+ D
Sbjct: 183 DIVVLACTHYPFLANRMRKTAPWPVDWLDPAEAIARRALSLLADIDPSGRGEMLPEGPDL 242
Query: 249 ALFLSGKPDIAMRRLMQGFGL 269
A+F S + D RRLMQGFGL
Sbjct: 243 AVFTSKRADFPTRRLMQGFGL 263
>gi|163868315|ref|YP_001609524.1| glutamate racemase [Bartonella tribocorum CIP 105476]
gi|189082952|sp|A9IU96|MURI_BART1 RecName: Full=Glutamate racemase
gi|161017971|emb|CAK01529.1| Glutamate racemase [Bartonella tribocorum CIP 105476]
Length = 275
Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 127/261 (48%), Positives = 179/261 (68%), Gaps = 3/261 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL VL++ R L+PE FIYVADD GFPYGNWE++ LK+ ++ +F+++L
Sbjct: 3 ERPVLFFDSGIGGLTVLREARVLIPEIQFIYVADDAGFPYGNWEENILKEHILNIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y P L VIACNT TL+ +LR FP + F+G VPAIK AA T+SG IS+L+TP T+
Sbjct: 63 TRYNPALCVIACNTVSTLMMADLRQKFPHVPFVGTVPAIKSAAEQTKSGFISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT+ LI+S+ QCH+ LV S LA E++ G I + ++KEI CF++K GK T
Sbjct: 123 KRAYTNELINSFAGQCHVQLVGSEKLAGFAEDHLRGKTIDSEALRKEILPCFVKKNGKCT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDDHA 249
DVIVLACTHYP +++ FR+ + W V+W+D + +IA+ R LLP +I+ + + D A
Sbjct: 183 DVIVLACTHYPFLINFFREQALWSVEWIDPAKAIAKHIRSLLPLSEKIHQKPIKKYQDFA 242
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
L S + L++GFGLK
Sbjct: 243 LLTSKNITASTEHLLKGFGLK 263
>gi|49474225|ref|YP_032267.1| glutamate racemase [Bartonella quintana str. Toulouse]
gi|81647061|sp|Q6FZU3|MURI_BARQU RecName: Full=Glutamate racemase
gi|49239729|emb|CAF26111.1| Glutamate racemase [Bartonella quintana str. Toulouse]
Length = 270
Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IL FDSGIGGL VL+++R L+PE FIYVADD GFPYGNWE++ LK ++ +F+++L
Sbjct: 3 ERPILFFDSGIGGLTVLREVRVLIPETQFIYVADDAGFPYGNWEENVLKNHILKVFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P L V+ACNT TL+ +LR FP F+G VPAIK AA T+SG IS+L+TP T+
Sbjct: 63 TLYNPTLCVVACNTVSTLMMADLRKEFPHTLFVGTVPAIKLAAKQTKSGFISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI+S+ QCH+ LV S LA+ E+Y G I +E++ EI CF E+ GK T
Sbjct: 123 KRAYTRELINSFAGQCHVQLVGSEKLAAFAEDYLRGKPIDLEELRNEILPCFFEQNGKYT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251
D IVLACTHYP ++++FR+ + WPV W+D + +IA+ R LLP R+ T+ D ALF
Sbjct: 183 DTIVLACTHYPFLINLFREQALWPVKWIDPAKAIAKHIRSLLPERMYHKNTKKLKDFALF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + + L++ FGL
Sbjct: 243 TSQNITSSTKHLLKEFGLN 261
>gi|319405660|emb|CBI79283.1| Glutamate racemase [Bartonella sp. AR 15-3]
Length = 270
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 177/259 (68%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL +L+++R + EY FIYVADD GFPYG WE+ L+ R++ +F+ +L
Sbjct: 3 EQPLLFFDSGIGGLTILREVRLFVSEYQFIYVADDAGFPYGIWEEEMLRHRILKIFTYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Y P L VIACNTA TL+ ++LR FP++ F+G VPAIK AA T+SG+IS+L+TP T+
Sbjct: 63 ELYNPALCVIACNTASTLMIEDLRREFPNIHFVGTVPAIKLAAEQTKSGVISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI+S+ QC++ LV S LA E Y G I +E++ EI CFIEK GK T
Sbjct: 123 KRAYTHELINSFAGQCYVQLVGSEKLAGFAENYLRGYPINYEELRHEILPCFIEKNGKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251
D+IVLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP +I + + D LF
Sbjct: 183 DIIVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPMKIQNKNMKEYTDFTLF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + L+Q F LK
Sbjct: 243 TSQNISPSTENLLQKFHLK 261
>gi|319407232|emb|CBI80871.1| Glutamate racemase [Bartonella sp. 1-1C]
Length = 270
Score = 268 bits (685), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ S+L FDSGIGGL +L+++R + EY FIY+AD+ GFPYG WE+ LK+R++ +F+ +L
Sbjct: 3 EQSLLFFDSGIGGLTILREVRLFVSEYQFIYIADNEGFPYGIWEEEILKRRILKIFTYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Y P L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SG+IS+L+TP+T+
Sbjct: 63 ELYNPALCVIACNTASTLMIKDLRRAFPNIRFVGTVPAIKLAAEQTKSGVISVLATPSTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI+S+ QCH+ LV S LA E Y G I +E+ EI CFIEK GK T
Sbjct: 123 RCAYTHELINSFAGQCHVQLVGSEKLAGFAESYLHGYPINHEELHHEILPCFIEKNGKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251
D +VLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP I + D ALF
Sbjct: 183 DTVVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPINIQNKNMKKHTDFALF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S A L+Q F LK
Sbjct: 243 TSQNISPATENLLQKFHLK 261
>gi|319404222|emb|CBI77815.1| Glutamate racemase [Bartonella rochalimae ATCC BAA-1498]
Length = 270
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ S+L FDSGIGGL +L+++R + EY FIY+AD+ GFPYG WE+ LK+R++ +F+ +L
Sbjct: 3 KQSLLFFDSGIGGLTILREVRLFVSEYQFIYIADNAGFPYGIWEEEILKRRILKIFTYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Y P L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SG+IS+L+TP+T+
Sbjct: 63 ELYNPALCVIACNTASTLMIKDLRRAFPNIRFVGTVPAIKLAAEQTKSGVISVLATPSTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI+S+ QCH+ LV S LA E Y G + +E++ EI CFIEK K T
Sbjct: 123 RCAYTHELINSFADQCHVQLVGSEKLAGFAENYLHGYPVNHEELRHEILPCFIEKNSKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251
D IVLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP + + D ALF
Sbjct: 183 DTIVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPINVQNKNMKKHTDFALF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S A L+Q F LK
Sbjct: 243 TSQNISPATENLLQKFHLK 261
>gi|121602574|ref|YP_989115.1| glutamate racemase [Bartonella bacilliformis KC583]
gi|166231026|sp|A1UT12|MURI_BARBK RecName: Full=Glutamate racemase
gi|120614751|gb|ABM45352.1| glutamate racemase [Bartonella bacilliformis KC583]
Length = 271
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/260 (49%), Positives = 173/260 (66%), Gaps = 2/260 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++ FDSGIGGL VL++ R L+PE F+YVADD GFPYG WE+ LK R++ +F+++L
Sbjct: 3 EKPVIFFDSGIGGLTVLKEARILIPELQFVYVADDAGFPYGAWEEDVLKGRILKVFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P L VIACNTA TL+ +LR FP + F+G VPAIK AAA T+SGLIS+L+TP T+
Sbjct: 63 KLYTPALCVIACNTASTLMISDLRQEFPHIPFVGTVPAIKSAAAQTKSGLISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI S+ +QCH+ LV S LA+ E Y G I +E++ EI CF+EK GK T
Sbjct: 123 KRAYTHELISSFANQCHVELVGSKKLATFAENYLRGYPIDYEELRHEILPCFVEKNGKYT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHAL 250
DVIVLACTHYP ++ +F + + W V+W+D + +IAR R LL N + ++AL
Sbjct: 183 DVIVLACTHYPFLISLFHKQALWSVNWIDPAKAIARHTRSLLLETMKNKSSKKNIKNYAL 242
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S D RL+Q F L
Sbjct: 243 FTSQNIDFVTERLLQRFNLN 262
>gi|304391421|ref|ZP_07373363.1| glutamate racemase [Ahrensia sp. R2A130]
gi|303295650|gb|EFL90008.1| glutamate racemase [Ahrensia sp. R2A130]
Length = 260
Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 174/255 (68%), Gaps = 2/255 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL VL++ R LMP + F+YVADD FPYG+WE AL +R+M +F D++ +
Sbjct: 2 TVLVFDSGLGGLSVLREARILMPGHRFVYVADDAAFPYGDWEAEALVERMMEVFEDLVTR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++P + ++ACNTA T+I LRS F +G VPAIK AA T SG IS+L+TP T++R
Sbjct: 62 FEPSMIIVACNTASTIILPHLRSRF-DFPVVGTVPAIKLAAELTASGHISVLATPGTVQR 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT +LI + S ++ LV + +A E + + + +K EIE CF+++ G RTDV
Sbjct: 121 DYTRSLISEFASTVNVRLVGAEKMAGLAEHFMLTGETDTEAVKSEIEDCFVDQYGARTDV 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VLACTHYP + +V+R+L+PWPVDWL+ +++IAR A+ LLP + D A F G
Sbjct: 181 VVLACTHYPFLTNVYRRLAPWPVDWLNPAEAIARHAKSLLPD-GDQPVKPIQDLAHFTGG 239
Query: 255 KPDIAMRRLMQGFGL 269
KPD+ +RL+ GFGL
Sbjct: 240 KPDVLRQRLLSGFGL 254
>gi|254502214|ref|ZP_05114365.1| glutamate racemase [Labrenzia alexandrii DFL-11]
gi|222438285|gb|EEE44964.1| glutamate racemase [Labrenzia alexandrii DFL-11]
Length = 260
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 160/247 (64%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL VL++ R+L+P +YVADD FP G W + L RL F+ +++ + P VI
Sbjct: 1 MGGLTVLREARYLLPCERLLYVADDAAFPIGRWPEEDLLVRLQDQFTRLIEDHDPKAVVI 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTAFTL LR FP + F+G VPAIK AA T SGLIS+L+TP T+RR YT +LI
Sbjct: 61 ACNTAFTLGGVALREAFPGVPFVGTVPAIKPAAERTASGLISVLATPGTVRRAYTRSLIE 120
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
S+ +QCH+ LV S LA E++ G + ++ + EI CF+E+ G+RTD++VLACTHY
Sbjct: 121 SFAAQCHVRLVGSDNLAELAEQHLRGEPVSDEALLPEISDCFLEQNGQRTDIVVLACTHY 180
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
P + + FR+++PWPVDWLD +++IAR+ +L + D A+ SG A+ R
Sbjct: 181 PFLANRFRKIAPWPVDWLDPAEAIARQLVRVLGQDLASVPSESPDLAILTSGARKPAIER 240
Query: 263 LMQGFGL 269
L+ GFGL
Sbjct: 241 LLAGFGL 247
>gi|323136843|ref|ZP_08071924.1| glutamate racemase [Methylocystis sp. ATCC 49242]
gi|322398160|gb|EFY00681.1| glutamate racemase [Methylocystis sp. ATCC 49242]
Length = 267
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 166/260 (63%), Gaps = 4/260 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL V ++ + P ++Y ADD GFPYG+W++ L R+M + ++ ++
Sbjct: 7 ILVFDSGLGGLTVFAEIVKIRPGADYVYCADDAGFPYGSWKEPELVDRVMKVMERLIAEH 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + VIACNTA TL+ LR+ +P + F+G VPAIK AA +++S +IS+L+TP T+ R
Sbjct: 67 APDMVVIACNTASTLVLPCLRARWPEIPFVGTVPAIKPAAEHSRSKMISVLATPGTVARD 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT NLI + + C + LV S LA E Y + ++EI EI CF E +G+RTDV+
Sbjct: 127 YTQNLIAQFAADCRVALVGSTTLARLAENYMHHGSVCDEEIAAEIAPCFQESDGRRTDVV 186
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDDHALFL 252
VLACTHYPL++ F++L+PWPV+W+D + +IARRA LL + + R A+F
Sbjct: 187 VLACTHYPLLLDAFQRLAPWPVEWIDPAPAIARRADQLLAGRFGRDESEPRAAPGRAVFT 246
Query: 253 SG-KPDIAMRRLMQGFGLKS 271
SG P +R + +GL +
Sbjct: 247 SGAAPAPQLRETLARYGLAA 266
>gi|217976585|ref|YP_002360732.1| glutamate racemase [Methylocella silvestris BL2]
gi|217501961|gb|ACK49370.1| glutamate racemase [Methylocella silvestris BL2]
Length = 279
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 141/214 (65%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL V ++ L P+ F+Y AD+ GFPYG AL R++ + ++D +
Sbjct: 7 ILVFDSGLGGLTVFAEIAALRPDAQFVYAADEAGFPYGALPATALAPRVLAVMGRLIDLF 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P ++VIACNTA TL+ LR+ FP + F+G VPAIK AA +QS +IS+L+TP T+ R
Sbjct: 67 SPDVAVIACNTASTLVLPHLRAAFPDLPFVGTVPAIKPAAQTSQSKMISVLATPGTVARD 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI +Y + C + LV S LAS E++ G + I EI F+E EG+RTD I
Sbjct: 127 YTRGLIEAYAADCKVMLVGSSRLASLAEDFMQGDAPSDAAILDEIAPAFVEAEGRRTDAI 186
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
LACTHYPL++ F +L+PWPV W+D + +IARR
Sbjct: 187 ALACTHYPLLIAQFERLAPWPVAWIDPAPAIARR 220
>gi|296448272|ref|ZP_06890166.1| glutamate racemase [Methylosinus trichosporium OB3b]
gi|296254224|gb|EFH01357.1| glutamate racemase [Methylosinus trichosporium OB3b]
Length = 280
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 154/242 (63%), Gaps = 3/242 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL V ++ L P +Y ADD GFPYG + AL R+M + ++ +
Sbjct: 13 ILVFDSGLGGLTVFVEVAKLRPHATLLYCADDAGFPYGPLSEEALVARVMLVMESLVAAH 72
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P L VIACNTA T + LR+ +P++ F+G VPA+K AA ++S LIS+L+TP T+ R
Sbjct: 73 APDLVVIACNTASTRVLPHLRARWPNLPFVGTVPAVKPAAERSRSRLISVLATPGTVTRD 132
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDV 194
YT LI S+ C LV S LA E++ G + E EI EI CF+++ +G RTDV
Sbjct: 133 YTRALIASFAEGCEATLVGSSRLAPIAEDFLRGAAVSEAEIAAEIAPCFVQRPDGARTDV 192
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFD-DHALFL 252
+VLACTHYPL++ FR+L+PWPV+W+D + +IAR+A R LL R + + A+F
Sbjct: 193 VVLACTHYPLLLDFFRRLAPWPVEWIDPAPAIARQADRLLLQRFGADRIGFREPPRAIFT 252
Query: 253 SG 254
SG
Sbjct: 253 SG 254
>gi|312113587|ref|YP_004011183.1| glutamate racemase [Rhodomicrobium vannielii ATCC 17100]
gi|311218716|gb|ADP70084.1| glutamate racemase [Rhodomicrobium vannielii ATCC 17100]
Length = 282
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 137/221 (61%), Gaps = 1/221 (0%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ K +L DSG+GGL VL+ R +PE +++ADD FPYG+ + L +RL+ L
Sbjct: 3 DSKRAARLLFLDSGLGGLTVLRAARAAIPEAEVLFIADDAAFPYGSKPEGELVERLLDLV 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L ++P V+ACNTA T+ LR+ F S+ F+G VPAIK AAA T+SGL+S+L+T
Sbjct: 63 GGALAAFEPDCVVLACNTASTVALSALRAAF-SVPFVGTVPAIKPAAAITRSGLVSVLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P T+ R YT LI Y + LV + LA E+YA G + + I +EI CF+E
Sbjct: 122 PGTVAREYTHTLIEKYALGARVALVGAANLAELAEDYASGETVSDAAIAREIAPCFVEDA 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
RTDV+VL CTHYPL++ LSPWPV WLD + +IARR
Sbjct: 182 DARTDVVVLGCTHYPLLLERLDALSPWPVTWLDPAPAIARR 222
>gi|170740490|ref|YP_001769145.1| glutamate racemase [Methylobacterium sp. 4-46]
gi|168194764|gb|ACA16711.1| glutamate racemase [Methylobacterium sp. 4-46]
Length = 290
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 150/242 (61%), Gaps = 2/242 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL VL ++R P+ +Y ADD FPYG+ + L R++ + ++
Sbjct: 22 AVLVFDSGLGGLTVLSELRRARPDARIVYAADDAAFPYGDLSEEMLVARVVAVMERLVAA 81
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P L V+ACNTA TL+ LR+ F ++ F+G VPAIK AAA T++G IS+L+TP T+RR
Sbjct: 82 HAPDLVVVACNTATTLVLPALRARF-AVPFVGTVPAIKPAAAATRTGRISVLATPGTVRR 140
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI +Y C + LV + LA+ E G + +D +++EI CF+ + RTDV
Sbjct: 141 DYTRELIDAYAGTCAVTLVGATRLAALAEADLAGCPVDDDVLREEIAPCFVGEGSARTDV 200
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALFLS 253
+VL CTHYPL++ F +L+PWPV W+D + ++ARR LL P A+F
Sbjct: 201 VVLGCTHYPLLLARFERLAPWPVTWIDPAPAVARRMAALLGPAPRGTDPEATPGLAVFTG 260
Query: 254 GK 255
G+
Sbjct: 261 GE 262
>gi|182678309|ref|YP_001832455.1| glutamate racemase [Beijerinckia indica subsp. indica ATCC 9039]
gi|182634192|gb|ACB94966.1| glutamate racemase [Beijerinckia indica subsp. indica ATCC 9039]
Length = 287
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 139/214 (64%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V ++ L P+ ++Y ADD FPYG + AL R++ + ++ Y
Sbjct: 10 LLIFDSGLGGLTVFAEILRLRPQADYLYAADDAAFPYGAMSEEALITRVLDVMGRLIASY 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P VIACNTA TL+ LR+ +P + F+G VPA+K A ++S LIS+L+TP T+ R
Sbjct: 70 APDAVVIACNTASTLVLPHLRAAYPDLPFVGTVPAVKPAGEISRSHLISVLATPGTVARD 129
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT L+ +Y S C + LV S LA E G + ++ I EI CF++ +G+RTD +
Sbjct: 130 YTHELVRTYASHCAVTLVGSRKLAGLAEAMMKGESVPDEAIAHEIAPCFVDFDGRRTDCV 189
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VLACTH+PL+ F++L+PWPV+W+D + +IARR
Sbjct: 190 VLACTHFPLLTDHFQRLAPWPVEWIDPAPAIARR 223
>gi|299131717|ref|ZP_07024912.1| glutamate racemase [Afipia sp. 1NLS2]
gi|298591854|gb|EFI52054.1| glutamate racemase [Afipia sp. 1NLS2]
Length = 265
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/254 (42%), Positives = 157/254 (61%), Gaps = 4/254 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL VL+++ P+ + YVADD FPYG E+ A+ R++ L D++ +
Sbjct: 6 AILVFDSGLGGLTVLREITTARPDAAYTYVADDAFFPYGRHEESAIIARVVPLIGDLIGR 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P L VIACNTA TL+ D LR + S+ F+G VPAIK A A +++ +S+L T T++R
Sbjct: 66 HTPDLVVIACNTASTLVMDHLRKAY-SVPFVGTVPAIKPACASSKTKRVSVLGTRGTVKR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + C + LV + LA+ E G + +D I EI CFIE RTD
Sbjct: 125 EYTKKLIADFAHDCEVTLVGAGNLATLAEAALRGESVSDDAILAEIAPCFIEGS-PRTDT 183
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VLACTHYPL++ R+++PW VDW+D + +IARR LL + + ++ LF SG
Sbjct: 184 VVLACTHYPLLLEQIRRIAPWTVDWIDPAPAIARRVESLLDK-SENENIPAPAKFLFTSG 242
Query: 255 K-PDIAMRRLMQGF 267
K P A+ R +Q F
Sbjct: 243 KSPSPALMRALQPF 256
>gi|46204044|ref|ZP_00050583.2| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1]
Length = 277
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/240 (42%), Positives = 146/240 (60%), Gaps = 2/240 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL VL+++R P+ H++Y ADD FPYG + L R++ + +L +Y
Sbjct: 10 ILVFDSGLGGLTVLEQVRRARPDAHYLYAADDAAFPYGRLSEPQLVARVIAVMERLLTRY 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P L VIACNTA T++ LR F F+G VP IK AAA T+S L+S+L+TP T+ R
Sbjct: 70 APDLVVIACNTASTVVLPALRQRF-VTPFVGVVPPIKPAAALTRSRLVSLLATPGTVARA 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKRTDV 194
YT +L+ ++ + C + LV S LA E G + + I EI CF+ +G+RTDV
Sbjct: 129 YTHDLVENFAADCAVTLVGSQNLARYAEAEMAGAPVADAAILAEIAPCFVTGADGRRTDV 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + A+F G
Sbjct: 189 VCLSCTHYPLLLGRFERLAPWPVIWIDPAPAIARRVVQLLGAALAARPEPPAARAIFTGG 248
>gi|220920402|ref|YP_002495703.1| glutamate racemase [Methylobacterium nodulans ORS 2060]
gi|219945008|gb|ACL55400.1| glutamate racemase [Methylobacterium nodulans ORS 2060]
Length = 312
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 143/220 (65%), Gaps = 1/220 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL VL ++R P+ +Y ADD FPYG+ + AL R++ + ++
Sbjct: 43 AVLVFDSGLGGLTVLAEVRRARPDARVVYAADDAAFPYGDLSEPALVARVVAVMERLIAL 102
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P L V+ACNTA TL+ LR+ F ++ F+G VPAIK AAA T+SGLIS+L+TP T+RR
Sbjct: 103 HAPDLVVVACNTATTLVLPALRARF-AIPFVGTVPAIKPAAAATRSGLISVLATPGTVRR 161
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI +Y + LV + LA+ E G + +D +++EI CF+ RTDV
Sbjct: 162 DYTRELIDAYAGAYAVTLVGATRLAAFAEAELAGTPVGDDLLREEIAPCFVGAGESRTDV 221
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTHYPL++ F +L PWPV W+D + +IARR LL
Sbjct: 222 VVLGCTHYPLLLRRFERLVPWPVTWIDPAPAIARRMAQLL 261
>gi|154247770|ref|YP_001418728.1| glutamate racemase [Xanthobacter autotrophicus Py2]
gi|154161855|gb|ABS69071.1| glutamate racemase [Xanthobacter autotrophicus Py2]
Length = 305
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 138/215 (64%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL V +++ + P+ HFIY ADD FPYG D L R+ + + ++ +
Sbjct: 33 TILVFDSGLGGLSVFREVARVRPDAHFIYAADDAAFPYGALADDTLVDRINRVVNRLIGE 92
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P L VIACNTA TL LR+ P++ F+G VPAIK A +++ +S+L+TP T+RR
Sbjct: 93 VRPDLVVIACNTASTLALPSLRAAHPTLPFIGTVPAIKPACIASRTKRVSVLATPGTVRR 152
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT+ L+ + S C + LV S LA E G + + +I EI CF+ G+RTD
Sbjct: 153 DYTAALVREFASGCDVALVPSDRLAGLAEAAMAGDPVDDCDIVAEIAPCFVNSGGRRTDT 212
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+VLACTHYPLI+ +L+PWPV ++D + +IARR
Sbjct: 213 VVLACTHYPLILDRLTRLAPWPVTFIDPAPAIARR 247
>gi|209884599|ref|YP_002288456.1| glutamate racemase [Oligotropha carboxidovorans OM5]
gi|209872795|gb|ACI92591.1| glutamate racemase [Oligotropha carboxidovorans OM5]
Length = 264
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 146/224 (65%), Gaps = 2/224 (0%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ +IL+FDSG+GGL VL+++ P+ + YVADD FPYG E+ + R++ L D
Sbjct: 2 SIPRAILVFDSGLGGLTVLREIAAARPDAAYTYVADDAFFPYGQHEEDEIIARVVPLIGD 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++D+++P L VIACNTA TL+ D LR + S+ F+G VPAIK A A +++ +S+L T
Sbjct: 62 LIDRHRPDLVVIACNTASTLVMDHLRKAY-SVPFVGTVPAIKPACAASKTKKVSVLGTRG 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++R YT LI ++ C + LV + LAS E G I +D ++ EI CF+E +
Sbjct: 121 TVKREYTRTLIRNFAQGCDVTLVGAENLASLAERALRGEAISDDAVRAEIAACFVE-DSP 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
RTD +VLACTHYPL++ ++++PWPV W+D + +IARR L+
Sbjct: 180 RTDTVVLACTHYPLLLEQIQRIAPWPVAWIDPAPAIARRVVSLI 223
>gi|91976246|ref|YP_568905.1| glutamate racemase [Rhodopseudomonas palustris BisB5]
gi|91682702|gb|ABE39004.1| glutamate racemase [Rhodopseudomonas palustris BisB5]
Length = 266
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/258 (42%), Positives = 156/258 (60%), Gaps = 6/258 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL VL+++ P+ H Y ADD FPYG + AL R++ L +++D
Sbjct: 6 NILVFDSGLGGLTVLREIVKARPDAHVTYAADDAFFPYGQHSEEALVGRVVPLIGELIDA 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P L VIACNTA TL+ LR+ + S+ F+G VPAIK A A +++ +S+L T T++R
Sbjct: 66 HTPALVVIACNTASTLVLSHLRAAY-SVPFVGTVPAIKPACAASKTKRVSVLGTSGTVKR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + C + LV S LA+ E G + ++ I+ EI CF++ +G RTD
Sbjct: 125 EYTRALIRDFAGGCDVTLVGSAHLAALAEAALGGADVADEAIRAEIAPCFVDADGSRTDT 184
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA----L 250
IVLACTHYPL++ +L+PWPVDW+D + +IARR LL + Q+ DH +
Sbjct: 185 IVLACTHYPLLLDRLMRLAPWPVDWIDPAPAIARRVVTLL-GPGSGQSDHQSDHPGAEMV 243
Query: 251 FLSGKPDIAMRRLMQGFG 268
F SG+P L FG
Sbjct: 244 FTSGRPPRFTAALAPYFG 261
>gi|158423846|ref|YP_001525138.1| glutamate racemase [Azorhizobium caulinodans ORS 571]
gi|158330735|dbj|BAF88220.1| glutamate racemase [Azorhizobium caulinodans ORS 571]
Length = 288
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 138/220 (62%), Gaps = 1/220 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL V +++ P+ FIY ADD FPYG D AL R+ + ++
Sbjct: 22 TILVFDSGLGGLSVFREVARARPDASFIYAADDAAFPYGALSDAALVARVSSVMDTLIAA 81
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P L V+ACNTA TL LR+ + F+G VPA+K A A + + +S+L+TP T+RR
Sbjct: 82 TRPTLVVVACNTASTLALPTLRAAH-GLPFVGTVPAVKPACAASVTRKVSVLATPGTVRR 140
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT++L+ + C + LV S LA E G I +++++ EI CF+ E RTD
Sbjct: 141 DYTASLVRDFAGSCEVTLVPSPRLAELAEAVMRGAAIDDEDLRAEIAPCFVRSETGRTDT 200
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VLACTHYPLIV R+++PWPV+++D + +IARR LL
Sbjct: 201 VVLACTHYPLIVDQLRRVAPWPVNFVDPAPAIARRVASLL 240
>gi|254470122|ref|ZP_05083526.1| glutamate racemase [Pseudovibrio sp. JE062]
gi|211960433|gb|EEA95629.1| glutamate racemase [Pseudovibrio sp. JE062]
Length = 257
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 142/228 (62%), Gaps = 1/228 (0%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E + +L+ DSG+GGL V ++++ +P+ +Y+AD FPYG+WE AL+ + L
Sbjct: 16 EPDVSGRVLVLDSGVGGLSVQREIKRALPDAGLLYLADRAAFPYGDWEADALRDHIASLV 75
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + D +QP V+ACNTA TL+ LR F + +G VPAIK AA T+SG+ ++L+T
Sbjct: 76 NSVSDVWQPSAVVVACNTASTLVLQRLRE-FLDVPVVGTVPAIKPAAQKTKSGVFAVLAT 134
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P T++R YT +LI + + HI LV + LA+ E+ + D ++ EI CF+EK
Sbjct: 135 PGTVKRDYTQDLIIDFAPEHHIALVGATGLAALAEDKLASRAVDLDRLRHEIAPCFVEKS 194
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
G+RTD +VL CTHYP + Q++PWPV W+D + +IARR +L R
Sbjct: 195 GERTDCVVLGCTHYPFLQEEMEQVAPWPVTWIDPAPAIARRLTDVLER 242
>gi|170747215|ref|YP_001753475.1| glutamate racemase [Methylobacterium radiotolerans JCM 2831]
gi|170653737|gb|ACB22792.1| glutamate racemase [Methylobacterium radiotolerans JCM 2831]
Length = 291
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 138/218 (63%), Gaps = 2/218 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL+FDSG+GGL VL +R P+ ++YV DD FPYG + L R++ + ++
Sbjct: 21 EPTILVFDSGLGGLTVLDAVRRARPDARYVYVGDDAAFPYGRLSEATLVARVLTVMERLV 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++P L VIACNTA TL+ LR F + F+G VP IK AA T+S L+++L+TP T+
Sbjct: 81 ATHRPDLVVIACNTASTLVLPALRQRF-TTPFVGVVPPIKPAAEATRSRLVTLLATPGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEGKR 191
R+YT +LI +Y C + LV S LA E G + + + EI CF+ E +G+R
Sbjct: 140 ARSYTHDLIATYAGTCAVTLVGSQNLAGFAEAELAGAPVDDAALAAEIAPCFVAEADGRR 199
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
TDV+ LACTHYPL++ + ++PWPV W+D + +IARR
Sbjct: 200 TDVVCLACTHYPLLLPRLQAVAPWPVTWIDPAPAIARR 237
>gi|115523653|ref|YP_780564.1| glutamate racemase [Rhodopseudomonas palustris BisA53]
gi|115517600|gb|ABJ05584.1| glutamate racemase [Rhodopseudomonas palustris BisA53]
Length = 278
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 155/256 (60%), Gaps = 4/256 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL VL+++ L P+ H++YVADD FPYG + A+ R++ L +++
Sbjct: 6 TILVFDSGLGGLTVLREITKLRPDAHYVYVADDAFFPYGQHGEEAIIARVVPLIGEMIAA 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P L VIACNTA TL+ LR+ + + F+G VPAIK A A +QS +S+L T T++R
Sbjct: 66 HAPDLVVIACNTASTLVLSHLRAAY-GVPFVGTVPAIKPACAGSQSKRVSVLGTRGTVQR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EGKRT 192
YT LI + C + LV S LA+ E G ++ + EI EI CF+ + G RT
Sbjct: 125 EYTKALIRDFAQNCAVTLVGSAHLAALAEAALGGAEVTDAEILAEIAPCFVAEPDHGPRT 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VLACTHYPL++ +L+PWPV+W+D + +IARR LL + H R +
Sbjct: 185 DTVVLACTHYPLLLDRLERLAPWPVNWIDPAPAIARRVSTLLAGVQGHADRA-GAQMIMT 243
Query: 253 SGKPDIAMRRLMQGFG 268
SG+P L+ FG
Sbjct: 244 SGRPHPLASVLLPFFG 259
>gi|27380813|ref|NP_772342.1| glutamate racemase [Bradyrhizobium japonicum USDA 110]
gi|27353978|dbj|BAC50967.1| glutamate racemase [Bradyrhizobium japonicum USDA 110]
Length = 265
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 142/223 (63%), Gaps = 4/223 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ + + R++ L +++
Sbjct: 6 TILVFDSGLGGLTVLREVVATRPDAHYVYVADDAFFPYGHHSEDEIIARVVPLMGELIGT 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P L VIACNTA TL+ LR+ + S+ F+G VPAIK A A ++S +S+L T T++R
Sbjct: 66 HDPDLVVIACNTASTLVLSHLRTAY-SLPFVGTVPAIKPACAQSKSRRVSVLGTKGTVKR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI---EKEGKR 191
YT LI + C + LV S LAS E G I +D+I E+ CF+ G R
Sbjct: 125 EYTKALIRDFAQGCEVTLVGSPELASLAERALGGHPISDDDILAELTPCFVGDAADAGAR 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
TD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL
Sbjct: 185 TDTVVLACTHYPLLLDRLTRLAPWPVDWIDPAPAIARRVSDLL 227
>gi|39934662|ref|NP_946938.1| glutamate racemase [Rhodopseudomonas palustris CGA009]
gi|39648512|emb|CAE27033.1| putative glutamate racemase [Rhodopseudomonas palustris CGA009]
Length = 264
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 152/256 (59%), Gaps = 4/256 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++
Sbjct: 6 TILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIAA 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P L VIACNTA T+ LR+ + + F+G VPAIK A A +++ +S+L T AT+R
Sbjct: 66 HAPDLVVIACNTASTMTLAPLRARY-RVPFVGTVPAIKPACAGSRTKRVSVLGTSATVRL 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RT 192
YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + K RT
Sbjct: 125 EYTRALIRDFAQGCEVSLVGSIRLATLAETALGGGEVTDAAIRAEIAPCFVEADAKRGRT 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F
Sbjct: 185 DAVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGPATGHAP-TPGAEMIFT 243
Query: 253 SGKPDIAMRRLMQGFG 268
SG+ A L FG
Sbjct: 244 SGRHPRASAALAPYFG 259
>gi|316935236|ref|YP_004110218.1| glutamate racemase [Rhodopseudomonas palustris DX-1]
gi|315602950|gb|ADU45485.1| glutamate racemase [Rhodopseudomonas palustris DX-1]
Length = 264
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 151/256 (58%), Gaps = 4/256 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++
Sbjct: 6 TILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIAA 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P L VIACNTA T+ LR+ + + F+G VPAIK A A +++ +S+L T AT+R
Sbjct: 66 HAPDLVVIACNTASTMTLAPLRARY-RVPFVGTVPAIKPACARSRTKRVSVLGTSATVRL 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RT 192
YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + RT
Sbjct: 125 EYTRALIRDFAQGCEVSLVGSVRLATLAETALGGGEVTDAAIRAEIAPCFVEADATRGRT 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F
Sbjct: 185 DSVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGEATGHAASP-KAEMIFT 243
Query: 253 SGKPDIAMRRLMQGFG 268
SG+ A L FG
Sbjct: 244 SGRQPRASAGLAPYFG 259
>gi|192290178|ref|YP_001990783.1| glutamate racemase [Rhodopseudomonas palustris TIE-1]
gi|192283927|gb|ACF00308.1| glutamate racemase [Rhodopseudomonas palustris TIE-1]
Length = 264
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 151/256 (58%), Gaps = 4/256 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++
Sbjct: 6 TILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIAA 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P L VIACNTA T+ LR+ + + F+G VPAIK A +++ +S+L T AT+R
Sbjct: 66 HAPDLVVIACNTASTMTLAPLRARY-RVPFVGTVPAIKPACTGSRTKRVSVLGTSATVRL 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RT 192
YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + K RT
Sbjct: 125 EYTRALIRDFAQGCEVSLVGSIRLATLAETALGGGEVTDAAIRAEIAPCFVEADAKRGRT 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F
Sbjct: 185 DAVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGPATGHAP-TPGAEMIFT 243
Query: 253 SGKPDIAMRRLMQGFG 268
SG+ A L FG
Sbjct: 244 SGRHPRASAALAPYFG 259
>gi|146339801|ref|YP_001204849.1| glutamate racemase [Bradyrhizobium sp. ORS278]
gi|146192607|emb|CAL76612.1| glutamate racemase [Bradyrhizobium sp. ORS278]
Length = 265
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 153/263 (58%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ + AL R++ L +++
Sbjct: 4 RPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSEPALVARVVPLMGELI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++P L VIACNTA LR+ + + F+G VPAIK A A +++ +S+L T AT+
Sbjct: 64 SAHRPDLIVIACNTASVQTLAPLRAAY-ATPFVGTVPAIKPACAQSRTKRVSVLGTKATV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG--- 189
+R YT LI + C + LV S LAS E G + +D I EI CF G
Sbjct: 123 QREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTGVSDDAIAMEIAPCFTGDAGDPT 182
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
RTD +VLACTHYPL++ ++L+PWPV W+D + +IARR LL RV DH
Sbjct: 183 ARTDAVVLACTHYPLLLDRLQRLAPWPVAWIDPAPAIARRVVDLL---GPQSGRV--DHG 237
Query: 250 ----LFLSGKPDIAMRRLMQGFG 268
+F S KP R L FG
Sbjct: 238 GATMIFTSNKPHQLSRVLTPYFG 260
>gi|298292133|ref|YP_003694072.1| glutamate racemase [Starkeya novella DSM 506]
gi|296928644|gb|ADH89453.1| glutamate racemase [Starkeya novella DSM 506]
Length = 280
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 137/229 (59%), Gaps = 1/229 (0%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
+P +IL+FDSG+GGL V +++ P+ F+Y ADD GFPYG + L R++
Sbjct: 7 HPSAALRAPTILVFDSGLGGLSVFRELARTRPDARFVYAADDAGFPYGARSEDDLVARVL 66
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ ++ + P VIACNTA TL+ LR+ + S+ F+G VPAIK A + + +S+
Sbjct: 67 AVMDALVARLAPDAVVIACNTASTLVLPALRARY-SIPFVGTVPAIKPACEGSLTKQVSV 125
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+TP T++R YT LI + C + LV S LA E G K+ ++E EI F+
Sbjct: 126 LATPGTVKRDYTQALIRDFAGACRVTLVGSTRLAGLAEAAMVGEKVADEEFAAEIAPAFV 185
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ RTD +VLACTHYPL++ ++++PWPV W+D + +IARR LL
Sbjct: 186 REGKSRTDTVVLACTHYPLVLDRLQKVAPWPVRWVDPAPAIARRLSSLL 234
>gi|188582653|ref|YP_001926098.1| glutamate racemase [Methylobacterium populi BJ001]
gi|179346151|gb|ACB81563.1| glutamate racemase [Methylobacterium populi BJ001]
Length = 286
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 145/226 (64%), Gaps = 2/226 (0%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + + L R++ +
Sbjct: 13 QNAQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGAFTEERLVSRVIAVME 72
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T+S LIS+L+TP
Sbjct: 73 RLLARHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRSRLISLLATP 131
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T+ R YT +L+ ++ + C + LV S LA E G + + + EI CF+E+ +
Sbjct: 132 GTVARAYTHDLVRNFAAHCAVTLVGSKNLAGYAEAEMAGEPVSDAALLAEIAPCFVEQAD 191
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
G+RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL
Sbjct: 192 GRRTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLL 237
>gi|254562390|ref|YP_003069485.1| glutamate racemase [Methylobacterium extorquens DM4]
gi|254269668|emb|CAX25640.1| glutamate racemase [Methylobacterium extorquens DM4]
Length = 291
Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 154/260 (59%), Gaps = 3/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + +L
Sbjct: 21 QPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVMERLL 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP T+
Sbjct: 81 LRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATPGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKR 191
R YT +L+ ++ C + LV S LA E G + + I EI CF+E +G R
Sbjct: 140 ARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVTDAAILAEIAPCFVEGPDGAR 199
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H A+F
Sbjct: 200 TDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPACAVF 259
Query: 252 LSGKP-DIAMRRLMQGFGLK 270
G + A+ R ++ GL
Sbjct: 260 TGGAGLNPALGRSLERRGLS 279
>gi|240139965|ref|YP_002964442.1| glutamate racemase [Methylobacterium extorquens AM1]
gi|240009939|gb|ACS41165.1| glutamate racemase [Methylobacterium extorquens AM1]
Length = 291
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 154/260 (59%), Gaps = 3/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + +L
Sbjct: 21 QPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVMERLL 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP T+
Sbjct: 81 LRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATPGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKR 191
R YT +L+ ++ C + LV S LA E G + + I EI CF+E +G R
Sbjct: 140 ARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGADGAR 199
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H A+F
Sbjct: 200 TDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPACAVF 259
Query: 252 LSGKP-DIAMRRLMQGFGLK 270
G + A+ R ++ GL
Sbjct: 260 TGGAGLNPALGRSLERRGLS 279
>gi|90423117|ref|YP_531487.1| glutamate racemase [Rhodopseudomonas palustris BisB18]
gi|90105131|gb|ABD87168.1| glutamate racemase [Rhodopseudomonas palustris BisB18]
Length = 265
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 140/220 (63%), Gaps = 1/220 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL VL+++ P+ ++YVADD FPYG + AL R++ L +++
Sbjct: 6 TILVFDSGLGGLTVLREIVKARPDAGYVYVADDAFFPYGQHGEDALIARVVPLIGELIAA 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++P L VIACNTA TL+ LR+ + + F+G VPAIK A A +++ +S+L T T++R
Sbjct: 66 HRPDLVVIACNTASTLVLSHLRAAY-KVPFVGTVPAIKPACAASRTKRVSVLGTSGTVKR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + C + LV S LA+ E G + + +I EI CF++ G RTD
Sbjct: 125 EYTRALIRDFAQACKVTLVGSAHLAALAEAALAGASVGDAQILAEIAPCFVDDGGARTDA 184
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VLACTH+PL++ L+PWPVDW+D + +IARR LL
Sbjct: 185 VVLACTHFPLLLDRLVALAPWPVDWIDPAPAIARRVANLL 224
>gi|218531473|ref|YP_002422289.1| glutamate racemase [Methylobacterium chloromethanicum CM4]
gi|218523776|gb|ACK84361.1| glutamate racemase [Methylobacterium chloromethanicum CM4]
Length = 286
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 153/260 (58%), Gaps = 3/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + +L
Sbjct: 16 QPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEERLVARVIAVMERLL 75
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP T+
Sbjct: 76 LRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATPGTV 134
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKR 191
R YT +L+ ++ C + LV S LA E G + + I EI CF+E +G
Sbjct: 135 ARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGADGAC 194
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H A+F
Sbjct: 195 TDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPACAVF 254
Query: 252 LSGKP-DIAMRRLMQGFGLK 270
G + A+ R ++ GL
Sbjct: 255 TGGAGLNPALGRSLERRGLS 274
>gi|163852632|ref|YP_001640675.1| glutamate racemase [Methylobacterium extorquens PA1]
gi|163664237|gb|ABY31604.1| glutamate racemase [Methylobacterium extorquens PA1]
Length = 291
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 153/260 (58%), Gaps = 3/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ + +L
Sbjct: 21 QPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVMERLL 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP T+
Sbjct: 81 LRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATPGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKR 191
R YT +L+ ++ C + LV S LA E G + + I EI CF+E +G
Sbjct: 140 ARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGADGAY 199
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H A+F
Sbjct: 200 TDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPACAVF 259
Query: 252 LSGKP-DIAMRRLMQGFGLK 270
G + A+ R ++ GL
Sbjct: 260 TGGAGLNPALGRSLERRGLS 279
>gi|148256679|ref|YP_001241264.1| glutamate racemase [Bradyrhizobium sp. BTAi1]
gi|146408852|gb|ABQ37358.1| glutamate racemase [Bradyrhizobium sp. BTAi1]
Length = 265
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 137/225 (60%), Gaps = 4/225 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ AL R++ L +++
Sbjct: 4 RPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSQEALIARVVPLMGELI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++P L VIACNTA LR+ + + F+G VPAIK A A +++ +S+L T AT+
Sbjct: 64 AGHRPDLIVIACNTASVQTLAPLRAAY-ATPFVGTVPAIKPACAQSRTKRVSVLGTKATV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI---EKEG 189
+R YT LI + C + LV S LAS E G + + I EI CF+
Sbjct: 123 QREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTSVSDAAIAAEIAPCFVGDATDPA 182
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
RTD +VLACTHYPL++ +L+PWPV W+D + +IARR LL
Sbjct: 183 GRTDTVVLACTHYPLLLDRLERLAPWPVAWIDPAPAIARRVVDLL 227
>gi|86750804|ref|YP_487300.1| glutamate racemase [Rhodopseudomonas palustris HaA2]
gi|86573832|gb|ABD08389.1| glutamate racemase [Rhodopseudomonas palustris HaA2]
Length = 264
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 145/228 (63%), Gaps = 3/228 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL VL+++ L P+ ++YV DD FPYG + A+ R++ L +++ +
Sbjct: 6 NILVFDSGLGGLTVLREVVKLRPDARYVYVGDDAFFPYGQKSEEAVIGRVVPLIGELIAE 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P L VIACNTA T+ LR+ + ++ F+G VPAIK A A +++ +S+L T T+R
Sbjct: 66 HAPDLVVIACNTASTMTLAPLRARY-AVPFVGTVPAIKPACAASRTKRVSVLGTSGTVRL 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RT 192
YT LI + C ++LV S+ LA+ E G + ++ I+ EI CF+ +G RT
Sbjct: 125 EYTRALIRDFAGGCDVNLVGSVHLAALAEAALGGADVPDEAIRAEIAPCFVAGDGADDRT 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
D IVLACTHYPL++ +L+PWPVDW+D + +IARR LL + H
Sbjct: 185 DSIVLACTHYPLLLDRLVRLAPWPVDWIDPAPAIARRVATLLGAGSGH 232
>gi|92117194|ref|YP_576923.1| glutamate racemase [Nitrobacter hamburgensis X14]
gi|91800088|gb|ABE62463.1| glutamate racemase [Nitrobacter hamburgensis X14]
Length = 265
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 150/257 (58%), Gaps = 5/257 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+ DSG+GGL VL+++ +P ++YVADD FPYG+ + + R++ L +++D
Sbjct: 6 TILVLDSGLGGLTVLREIVKALPGARYVYVADDAFFPYGHHSEDEIIARVVPLVGELIDT 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y P L+VIACNT + LR+ + S+ F+G VPAIK A A +++ +S+L T AT++R
Sbjct: 66 YTPDLAVIACNTMSVSVLGPLRAAY-SVPFVGTVPAIKPACAASKTKRVSVLGTRATVQR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI---EKEGKR 191
YT LI + C + LV + LA E+ G + + +I EI CF+ + R
Sbjct: 125 EYTQALIRDHARACTVTLVGAAHLARLAEDALRGKPVSDADIVSEIAPCFVPAADGGALR 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD +VLACTHYPL++ +L+PWPV W+D + +IARR LL ++ R F +F
Sbjct: 185 TDAVVLACTHYPLLLDRLLRLAPWPVAWIDPAPAIARRVVDLLGPGDSGG-REFPPEMIF 243
Query: 252 LSGKPDIAMRRLMQGFG 268
SG+ L FG
Sbjct: 244 TSGRSRTLTDALAPFFG 260
>gi|75675509|ref|YP_317930.1| glutamate racemase [Nitrobacter winogradskyi Nb-255]
gi|74420379|gb|ABA04578.1| glutamate racemase [Nitrobacter winogradskyi Nb-255]
Length = 271
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 136/218 (62%), Gaps = 4/218 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+ DSG+GGL VL+++ +P +IYVADD FPYG + + R++ L +++
Sbjct: 6 TILVLDSGLGGLTVLREIVNALPAARYIYVADDAFFPYGRLSEEDIIARVVPLVGELIGA 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P + VIACNT + LR+ +P+ F+G VPAIK A A +++ +S+L T AT++R
Sbjct: 66 HAPDIVVIACNTMSVSVLGPLRAAYPA-PFVGTVPAIKPACAASKTKRVSVLGTRATVQR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI---EKEGKR 191
YT LI ++ C + LV + LAS E+ G + + +I EI CF+ E G R
Sbjct: 125 EYTQALIRNHAQACTVTLVGAARLASLAEDALSGKLVSDADILSEITPCFVPAGEGGGLR 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
TD +VLACTHYPL++ +L+PWPV W+D + +IARR
Sbjct: 185 TDAVVLACTHYPLLLDRLLRLAPWPVSWIDPAPAIARR 222
>gi|85715176|ref|ZP_01046160.1| glutamate racemase [Nitrobacter sp. Nb-311A]
gi|85698091|gb|EAQ35964.1| glutamate racemase [Nitrobacter sp. Nb-311A]
Length = 280
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 147/257 (57%), Gaps = 5/257 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+ DSG+GGL VL+K+ +P ++YVADD FPYG + + R++ L +++
Sbjct: 6 TILVVDSGLGGLTVLRKIVDALPAARYVYVADDAFFPYGRLSEEEIIARVVPLVGELIGA 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P + VIACNT + LR+ + S+ F+G VPAIK A A +++ +S+L T AT++R
Sbjct: 66 HAPDIVVIACNTMSVSVLGPLRAAY-SIPFVGTVPAIKPACAASKTKRVSVLGTRATVQR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK--R 191
YT LI + C + LV + LAS E+ G + + +I EI CF+ +G R
Sbjct: 125 EYTQALIRDHAQACTVTLVGAASLASLAEDALRGKTVSDADILSEIAPCFVSAVDGGDLR 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD +VLACTHYPL++ +L+PWPV W+D + +IARR LL R +F
Sbjct: 185 TDAVVLACTHYPLLLDRLLKLAPWPVSWIDPAPAIARRVVDLL-GSGGGGDREAPPEMIF 243
Query: 252 LSGKPDIAMRRLMQGFG 268
SG+P L FG
Sbjct: 244 TSGRPHGLTDALAPFFG 260
>gi|90021260|ref|YP_527087.1| glutamate racemase [Saccharophagus degradans 2-40]
gi|89950860|gb|ABD80875.1| glutamate racemase [Saccharophagus degradans 2-40]
Length = 272
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 135/235 (57%), Gaps = 2/235 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG GGL + K+ L + +Y AD+ FPYG AL++R++ +++D+
Sbjct: 14 TVLVFDSGAGGLSICTKIMALRNDCAIVYAADNAYFPYGELSTSALRQRVITFMGELIDQ 73
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y P ++VIACNTA T + +LR TF + F+G VPAIK AA TQ+G I+IL+T AT+ R
Sbjct: 74 YSPSIAVIACNTASTALLADLRETF-DIPFVGVVPAIKPAATATQTGTIAILATSATVTR 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT +LI+ + + L S+ L S E+ + I+ + F + + D
Sbjct: 133 DYTRDLINEFAPNKTVILHSAQPLVSAAEQLIQNNQCPNSAIQGALSELFAKPGAEHIDT 192
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDH 248
IVLACTH+PL+ + L P + LD+ D+IARR LL NT QT+ H
Sbjct: 193 IVLACTHFPLLREAIQALLPASITLLDSGDAIARRVDSLLCATNTLKQTQRISVH 247
>gi|258542160|ref|YP_003187593.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01]
gi|256633238|dbj|BAH99213.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01]
gi|256636297|dbj|BAI02266.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-03]
gi|256639350|dbj|BAI05312.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-07]
gi|256642406|dbj|BAI08361.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-22]
gi|256645461|dbj|BAI11409.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-26]
gi|256648514|dbj|BAI14455.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-32]
gi|256651567|dbj|BAI17501.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654558|dbj|BAI20485.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-12]
Length = 289
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 146/264 (55%), Gaps = 10/264 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M+ID P L++ IL FDSGIGGL +++ ++ L P+ Y+AD FPYG +D L
Sbjct: 1 MQIDG-PALSGLRH-ILAFDSGIGGLGIVRAIQALAPDICIDYLADTAIFPYGEQDDDFL 58
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ L S + + QP V+ACNTA TL + LR+ +P M F+G VP I+ AA TQ+
Sbjct: 59 IERIVSLLSQAIRRLQPQAVVVACNTASTLALEALRAAWPDMPFVGCVPPIRWAARITQT 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+I +L+T AT+RR Y S L Y +C + ++ LA E G + + I +EI
Sbjct: 119 KVIGLLATRATVRRPYLSRLHALYAPECTLIAHAAPGLAGCAELAFRGQDVPDSTILQEI 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI--- 237
EG F+ + R D + L CTHY ++ R LSP + WLD + ++AR LL +
Sbjct: 179 EGLFVHPDSNRLDAVGLGCTHYTFVLDRLRALSPPGLTWLDPAPAVARHTCNLLAHLPQK 238
Query: 238 -NTHQTRVF----DDHALFLSGKP 256
+ H F DD ALF KP
Sbjct: 239 AHAHPCAWFTALPDDQALFTHLKP 262
>gi|260752377|ref|YP_003225270.1| glutamate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258551740|gb|ACV74686.1| glutamate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 276
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 128/222 (57%), Gaps = 1/222 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSHPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K ++E++ + EG R
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYREELDRLLQQPEGDR 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYL 221
>gi|329113332|ref|ZP_08242113.1| Glutamate racemase [Acetobacter pomorum DM001]
gi|326697157|gb|EGE48817.1| Glutamate racemase [Acetobacter pomorum DM001]
Length = 304
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 127/219 (57%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL FDSGIGGL +++ ++ L P Y+AD FPYG +D L +R++ L S + +
Sbjct: 34 ILAFDSGIGGLGIVRAIQALAPNVCIDYLADTAIFPYGEQDDDFLIERIVSLLSQAIRRL 93
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
QP V+ACNTA TL + LR+ +P M F+G VP I+ AA TQ+ +I +L+T AT+RR
Sbjct: 94 QPQAVVVACNTASTLALEALRAAWPDMPFVGCVPPIRWAARITQTKVIGLLATRATVRRP 153
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y S L Y +C + ++ LA E G + + I +EIEG F+ + R D +
Sbjct: 154 YLSRLHALYAPECTLIAHAAPGLAGCAELAFRGQDVPDSTILREIEGLFVHPDSNRLDAV 213
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
L CTHY +++ R LSP + WLD + ++AR LL
Sbjct: 214 GLGCTHYTFVLNRLRALSPPGLTWLDPAPAVARHTCNLL 252
>gi|56552093|ref|YP_162932.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543667|gb|AAV89821.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 276
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 126/222 (56%), Gaps = 1/222 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSRPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K + E++ + EG R
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDR 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYL 221
>gi|54310515|ref|YP_131535.1| glutamate racemase [Photobacterium profundum SS9]
gi|46914958|emb|CAG21733.1| putative glutamate racemase [Photobacterium profundum SS9]
Length = 262
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 129/220 (58%), Gaps = 6/220 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++LIFDSG+GGL V Q+++ L+P+ +IY D+ FPYG E+ L +R + + ++
Sbjct: 3 TVLIFDSGVGGLSVYQELQALIPQVQYIYAFDNAAFPYGELEEDVLLQRTQHIVCSLAEQ 62
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ L VIACNTA T++ LR + S+ +G VPAIK AA +Q+ +I +L+TPAT+ R
Sbjct: 63 HNVDLVVIACNTASTIVLPTLRESL-SIPVVGVVPAIKPAATLSQTKVIGLLATPATIHR 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT LI S+ S C + ++ S L EE G+ + DEI + I+ K D
Sbjct: 122 SYTHELISSFASDCEVRMIGSTRLVEIAEEKLRGLPVSIDEIAE-----IIKPWQKDVDC 176
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
I+L CTH+PLI RQ + +D+ +IA R + LL
Sbjct: 177 IILGCTHFPLIKDEIRQALDKAIVIVDSGKAIANRVKDLL 216
>gi|304398949|ref|ZP_07380818.1| glutamate racemase [Pantoea sp. aB]
gi|304353409|gb|EFM17787.1| glutamate racemase [Pantoea sp. aB]
Length = 283
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 142/251 (56%), Gaps = 12/251 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + I
Sbjct: 20 LRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKSETFIVERVVAIVEAI 79
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+Y L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T AT
Sbjct: 80 TQRYPLSLVIIACNTASTVSLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATRAT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR YT L+ + C+I ++ S L E G ++ DE+++ ++ + +
Sbjct: 139 VRRPYTHELVAQFAGSCNIEMLGSAELVELAEAKLHGAEVALDEVRRIVQPWL--RMAEP 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL----PRINTHQTRV--- 244
D +VL CTH+PL+ +Q+ P +D+ +IARR LL P +N+ Q V
Sbjct: 197 PDTVVLGCTHFPLLREELQQVLPEGTRLIDSGAAIARRTAWLLEHEAPEVNSSQQNVAFC 256
Query: 245 --FDDHALFLS 253
D A+ LS
Sbjct: 257 TALDGEAVQLS 267
>gi|241762044|ref|ZP_04760128.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241373510|gb|EER63097.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 276
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 126/222 (56%), Gaps = 1/222 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSRPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K + E++ + EG +
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDQ 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYL 221
>gi|90414704|ref|ZP_01222675.1| glutamate racemase [Photobacterium profundum 3TCK]
gi|90324246|gb|EAS40821.1| glutamate racemase [Photobacterium profundum 3TCK]
Length = 263
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 127/220 (57%), Gaps = 6/220 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ILIFDSG+GGL V Q+++ LMP+ +IY D+ FPYG + L +R + + +K
Sbjct: 4 TILIFDSGVGGLSVYQEIQSLMPQIQYIYAFDNAAFPYGELAEDVLLQRTQRIVCSLAEK 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ L VIACNTA T++ LR S+ +G VPAIK AA +Q+ +I +L+TPAT+ R
Sbjct: 64 HNVDLVVIACNTASTIVLPILRENL-SVPVVGVVPAIKPAAILSQTKVIGLLATPATIHR 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT LI S+ S C + ++ S L EE G+ + DEI + I+ K D
Sbjct: 123 SYTHELISSFASDCEVRMIGSTRLVEIAEEKLRGLPVSIDEIAE-----IIKPWQKDVDC 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
I+L CTH+PLI RQ + +D+ +IA R + LL
Sbjct: 178 IILGCTHFPLIKDEIRQALDKAIVIVDSGKAIANRVKGLL 217
>gi|114799484|ref|YP_761669.1| glutamate racemase [Hyphomonas neptunium ATCC 15444]
gi|114739658|gb|ABI77783.1| glutamate racemase [Hyphomonas neptunium ATCC 15444]
Length = 290
Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 128/234 (54%), Gaps = 2/234 (0%)
Query: 6 YPCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+P E + +L+FDSG+GGL V ++R L P Y AD FPYG+ D AL+ RL
Sbjct: 7 FPFEPSPARGRVLVFDSGVGGLTVAAEIRALGPRLSVHYAADTGFFPYGDKSDEALRARL 66
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ +++ +P + VIACNTA TL E+R+ + +G VPAIK AA T++G I
Sbjct: 67 PVVAKALVEAVRPDVFVIACNTASTLALPEVRAVL-DIPVVGTVPAIKPAAKLTETGTIG 125
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+TP T+RR YT+ LI + S + L S+ L E +A G + + F
Sbjct: 126 LLATPGTIRRAYTARLIEEFASGKRVILHGSLDLVKLAEAHARGEDVPPEAFAAAQAPLF 185
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
G + D IVLACTH+PL+ +P V ++D+ +IAR+ +LP N
Sbjct: 186 TAPGGDQIDTIVLACTHFPLVRGQLIATAPHAVSYIDSGAAIARQTIRVLPARN 239
>gi|308188582|ref|YP_003932713.1| glutamate racemase [Pantoea vagans C9-1]
gi|308059092|gb|ADO11264.1| Glutamate racemase [Pantoea vagans C9-1]
Length = 283
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 143/251 (56%), Gaps = 12/251 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + I
Sbjct: 20 LRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKSETFIVERVVAIVEAI 79
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+Y L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T AT
Sbjct: 80 TQRYPLSLVIIACNTASTVSLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATRAT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR YT L+ + C+I ++ S L E G ++ DE+++ ++ + +
Sbjct: 139 VRRPYTHELVSQFAGSCNIEMLGSAELVELAEAKLHGAEVALDEVRRIVQPWL--RMAEP 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL----PRINTHQTRV--- 244
D +VL CTH+PL+ +Q+ P +D+ +IARR LL P+I++ Q V
Sbjct: 197 PDTVVLGCTHFPLLREELQQVLPEGTRLIDSGAAIARRTVWLLEHEAPQIHSSQQNVAFC 256
Query: 245 --FDDHALFLS 253
D A+ LS
Sbjct: 257 TELDGEAVQLS 267
>gi|330994654|ref|ZP_08318577.1| Glutamate racemase [Gluconacetobacter sp. SXCC-1]
gi|329758295|gb|EGG74816.1| Glutamate racemase [Gluconacetobacter sp. SXCC-1]
Length = 279
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 1/215 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL FDSGIGGL V+ ++R L+P Y+AD +PYG D L+ R++ L + +
Sbjct: 4 ILAFDSGIGGLGVVAQLRALLPGVPIDYLADTAVYPYGEQPDALLRHRIVTLLGQAIARL 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P + VIACNTA TL D LR+T+ + F+G VP IK AA +T++G I +L+T AT+RR
Sbjct: 64 RPSVVVIACNTASTLALDSLRATY-GIPFVGCVPPIKWAADHTRTGTIGLLATRATVRRP 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y +L + +C + + LA E G+ ++ E++G F + G DV+
Sbjct: 123 YLQDLHARFAPRCTLLAHGARGLADMAERAFRGLPPDRTQLAIELDGLFGQPGGAAIDVV 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ CTHY ++ R+ P V WLD + ++AR+A
Sbjct: 183 GIGCTHYTFLLDALRESGPAGVTWLDPAPAVARQA 217
>gi|262273148|ref|ZP_06050964.1| glutamate racemase [Grimontia hollisae CIP 101886]
gi|262222726|gb|EEY74035.1| glutamate racemase [Grimontia hollisae CIP 101886]
Length = 263
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 131/243 (53%), Gaps = 6/243 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
S+LIFDSG+GGL V +++ L+PE H +Y D+ FPYG D L +R+ + + +
Sbjct: 2 KSVLIFDSGVGGLSVYKEIAQLLPEQHIVYAFDNAAFPYGELADDILIQRVCGMVASLCH 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA TL+ LRS S+ +G VPAIK AAA +++ I +L+TPAT+
Sbjct: 62 ELDIALVVIACNTASTLVLPHLRSLL-SIPVVGVVPAIKPAAAMSKTKHIGLLATPATVN 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
RTYT L+ + CH+ +V S L E GI + + +I K++ FI K TD
Sbjct: 121 RTYTKQLVEEFAPDCHVEMVGSTELVQMGEGKLRGIPV-DKKILKQVLMPFINK----TD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+PL+ ++ +D+ +IA R LL T D L S
Sbjct: 176 CIVLGCTHFPLLRDEIEEILGDQCLVIDSGKAIANRVDTLLKERGALSTSFRDKKHLAFS 235
Query: 254 GKP 256
P
Sbjct: 236 SAP 238
>gi|157373001|ref|YP_001480990.1| glutamate racemase [Serratia proteamaculans 568]
gi|167017321|sp|A8GL72|MURI_SERP5 RecName: Full=Glutamate racemase
gi|157324765|gb|ABV43862.1| glutamate racemase [Serratia proteamaculans 568]
Length = 287
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 144/262 (54%), Gaps = 4/262 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + ++L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S
Sbjct: 23 KTRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIVSA 82
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ ++ + +IACNTA T+ LR F + +G VPAIK AA T +G++ +L+T
Sbjct: 83 VQQRHPLAIVIIACNTASTVSLPALRERF-TFPVVGVVPAIKPAARLTANGVVGLLATRG 141
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++RTYT LI + + C I L+ S L E G + +KK + +E
Sbjct: 142 TVQRTYTHELIARFATDCKIELLGSSELVELAEAKLHGEAVPLPTLKKILHPWLSMREPP 201
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+PL+ Q+ P +D+ +IARR L+ + D+ A
Sbjct: 202 --DTVVLGCTHFPLLAEELMQVLPEGTRLIDSGAAIARRTAWLISTQENLVSTQEDNLAY 259
Query: 251 FLSGKPDI-AMRRLMQGFGLKS 271
++ D A+ ++QG+G KS
Sbjct: 260 CMALNEDTDALLPVLQGYGFKS 281
>gi|119773335|ref|YP_926075.1| glutamate racemase [Shewanella amazonensis SB2B]
gi|119765835|gb|ABL98405.1| glutamate racemase [Shewanella amazonensis SB2B]
Length = 266
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 128/233 (54%), Gaps = 5/233 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E L IL+FDSGIGGL VL ++R L+P F Y+ D+ PYG + L + L
Sbjct: 2 EFGLARPILVFDSGIGGLSVLSEIRQLLPSNDFYYLFDNARLPYGELTEQVLVDGCVELV 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
K L VIACNTA TL+ LRS ++ +G VPAIK AA++T SG I +L+T
Sbjct: 62 VSAATKINAALVVIACNTASTLVLPVLRSKL-TIPVVGVVPAIKPAASHTLSGHIGLLAT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PAT++R+YT L+ + S C +H+ S L E+ G+ + +++ G +
Sbjct: 121 PATVKRSYTHELVTKFASDCQVHMFGSSELVMMAEQKMAGVPVDMEKLT----GILAPIQ 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ DV+VL CTH+P++ + Q+ + LD+ +IA R + +L + HQ
Sbjct: 177 ATQVDVLVLGCTHFPMLAYELSQILGPGIKLLDSGFAIASRVQHVLEGLGEHQ 229
>gi|254785730|ref|YP_003073159.1| glutamate racemase [Teredinibacter turnerae T7901]
gi|237683438|gb|ACR10702.1| glutamate racemase [Teredinibacter turnerae T7901]
Length = 283
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 1/224 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+ DSG GGL V +++ P+ Y AD GFPYG D L +RL+ L + L +
Sbjct: 14 ILVLDSGAGGLTVAREILHRNPDVSMDYFADIAGFPYGTMPDDVLIRRLVSLVGNCLSQR 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
QP + V+ACNTA TL LR+ +P++ F+G VPAIK AA+ T++G+I +L+TPAT+ R
Sbjct: 74 QPDIVVLACNTASTLALRALRARYPTVEFVGVVPAIKPAASITRTGVIGLLATPATVNRD 133
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + S L E+ G K + +E+ + D I
Sbjct: 134 YTRQLIEDFAGNHEVVTHGSNPLVVCAEQLLQGTKPDTGILIEELGKLRTKSTAGSVDTI 193
Query: 196 VLACTHYPLIVHVFRQL-SPWPVDWLDNSDSIARRARCLLPRIN 238
VLACTH+PL++ F+ L S + W+D+ +IA R LL ++
Sbjct: 194 VLACTHFPLLLPYFKALPSCESISWVDSGSAIANRVHHLLQKLG 237
>gi|270265151|ref|ZP_06193413.1| glutamate racemase [Serratia odorifera 4Rx13]
gi|270040785|gb|EFA13887.1| glutamate racemase [Serratia odorifera 4Rx13]
Length = 260
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 141/257 (54%), Gaps = 4/257 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S + ++
Sbjct: 1 MLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIVSAVQQRH 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++RT
Sbjct: 61 PLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAARLTANGVVGLLATRGTVQRT 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + C I L+ S L E G + +KK + +E D +
Sbjct: 120 YTHELIARFATDCKIELLGSSELVELAEAKLHGEAVPLATLKKILHPWLSMREPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PL+ Q+ P +D+ +IARR L+ + D+ A ++
Sbjct: 178 VLGCTHFPLLAEELMQVLPEGTRLVDSGAAIARRTAWLISSQENLVSTQEDNLAYCMALN 237
Query: 256 PDI-AMRRLMQGFGLKS 271
D A+ ++QG+G KS
Sbjct: 238 EDTDALLPVLQGYGFKS 254
>gi|291619386|ref|YP_003522128.1| MurI [Pantoea ananatis LMG 20103]
gi|291154416|gb|ADD79000.1| MurI [Pantoea ananatis LMG 20103]
Length = 283
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 131/223 (58%), Gaps = 3/223 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + I
Sbjct: 20 LRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKTETFIVERVVAIVDAI 79
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T AT
Sbjct: 80 TRRHPISLVIIACNTASTVTLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATRAT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR+YT L+ + C I ++ S L E G ++ DEI++ ++ + +
Sbjct: 139 VRRSYTHELVSQFAKTCKIEMLGSAELVELAEAKLHGEEVSIDEIRRIVQPWL--RMAEP 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+PL+ +Q+ P +D+ +IARR LL
Sbjct: 197 PDTVVLGCTHFPLLRDELQQILPEGTRLIDSGAAIARRTAWLL 239
>gi|327395709|dbj|BAK13131.1| glutamate racemase MurI [Pantoea ananatis AJ13355]
Length = 241
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 131/223 (58%), Gaps = 3/223 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ + I
Sbjct: 20 LRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKTETFIVERVVAIVDAI 79
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T AT
Sbjct: 80 TRRHPISLVIIACNTASTVTLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATRAT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR+YT L+ + C I ++ S L E G ++ DEI++ ++ + +
Sbjct: 139 VRRSYTHELVSQFAKTCKIEMLGSAELVELAEAKLHGEEVSIDEIRRIVQPWL--RMAEP 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+PL+ +Q+ P +D+ +IARR LL
Sbjct: 197 PDTVVLGCTHFPLLRDELQQILPEGTRLIDSGAAIARRTAWLL 239
>gi|192359030|ref|YP_001982653.1| glutamate racemase [Cellvibrio japonicus Ueda107]
gi|190685195|gb|ACE82873.1| glutamate racemase [Cellvibrio japonicus Ueda107]
Length = 279
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 128/220 (58%), Gaps = 3/220 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL V Q+++ +P IY +D+ FPYG E+ L R+ + + +L Y
Sbjct: 16 ILVFDSGVGGLSVAQEIQASLPGVALIYASDNAAFPYGTKEEGELIARVERVMAALLASY 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA TL LR F ++ F+G VPAIK AA +QSG+I +L+TPAT+ R
Sbjct: 76 PVDLVVVACNTASTLTLPHLRQRF-NLPFVGVVPAIKPAAESSQSGVIGLLATPATVARP 134
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DV 194
YT +LI ++ S C + + S L E+ G I + I I ++ +G R D
Sbjct: 135 YTHDLITTHASDCTVISLGSSELVLLAEQKLRGETITDKAIAP-ITQALLDADGSRQMDR 193
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VLACTH+PL+ + P + +D+ +IARR + LL
Sbjct: 194 LVLACTHFPLLREELGRNLPQRIQLIDSGAAIARRVKHLL 233
>gi|37528551|ref|NP_931896.1| glutamate racemase [Photorhabdus luminescens subsp. laumondii TTO1]
gi|81572235|sp|Q7MYE4|MURI_PHOLL RecName: Full=Glutamate racemase
gi|36787989|emb|CAE17106.1| glutamate racemase [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 287
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + ++L+FDSG+GGL + Q++R L+P+ H+IYV D+ FPYG + + +R++ +
Sbjct: 22 KAARPTVLVFDSGVGGLSIYQEIRQLLPDLHYIYVFDNEAFPYGEKSEEFIVERVVQIVG 81
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I K+ + VIACNTA T+ LR F S +G VPAIK AA T++G++ +L+T
Sbjct: 82 AIQQKHPLTIVVIACNTASTVSLPALRERF-SFPVVGVVPAIKPAAKLTRNGVVGLLATR 140
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R+YT LI + + C I + S L E G K+ D +KK ++ K
Sbjct: 141 ATVNRSYTKELIEKFATGCRIESIGSAELVELAEIKLHGGKVSPDILKKILKPWLGMK-- 198
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
K D +VL CTH+PL+ Q+ P +D+ +IARR L+ N D A
Sbjct: 199 KPPDTVVLGCTHFPLLAEELVQILPDGTRLIDSGVAIARRTAWLVKHQNNLVCTSADSLA 258
Query: 250 LFLSGKPDI-AMRRLMQGFG 268
+ D A+ ++Q +G
Sbjct: 259 YCMKVNTDTDALIPVLQEYG 278
>gi|293393497|ref|ZP_06637807.1| glutamate racemase [Serratia odorifera DSM 4582]
gi|291423832|gb|EFE97051.1| glutamate racemase [Serratia odorifera DSM 4582]
Length = 260
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 143/257 (55%), Gaps = 4/257 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + + +Y
Sbjct: 1 MLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEQFIVERVLEIVGAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ +IACNTA T+ LR+ F S +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLAIVIIACNTASTVSLPALRARF-SFPVVGVVPAIKPAAKLTANGIVGLLATRGTVQRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + C I L+ S L E G ++ +KK ++ +E D +
Sbjct: 120 YTHELIARFATDCKIELLGSSELVELAEAKLHGEEVPLAALKKILQPWLSMREPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PL+ Q+ P +D+ +IARRA L+ ++ ++ A ++
Sbjct: 178 VLGCTHFPLLADELMQVLPQGTRLVDSGAAIARRAAWLISSQENLRSSQEENVAYCMALN 237
Query: 256 PDI-AMRRLMQGFGLKS 271
D A+ ++Q +G S
Sbjct: 238 DDTDALLPVLQSYGFNS 254
>gi|292486642|ref|YP_003529512.1| glutamate racemase [Erwinia amylovora CFBP1430]
gi|292897879|ref|YP_003537248.1| glutamate racemase [Erwinia amylovora ATCC 49946]
gi|291197727|emb|CBJ44822.1| glutamate racemase [Erwinia amylovora ATCC 49946]
gi|291552059|emb|CBA19096.1| Glutamate racemase [Erwinia amylovora CFBP1430]
gi|312170706|emb|CBX78969.1| Glutamate racemase [Erwinia amylovora ATCC BAA-2158]
Length = 283
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 143/258 (55%), Gaps = 4/258 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + + + +
Sbjct: 23 TVLIFDSGVGGLSVYSEIRALLPDLHYLYAFDNVAFPYGEKSEEFIVERVLAIVTAVTRR 82
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T++R
Sbjct: 83 YPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGTVKR 141
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT L+ + +C ++ S L E G + +E+++ ++ + + D
Sbjct: 142 PYTHELVARFAGECRTEMLGSGELVELAEAKLHGQPVAIEEVRRILQPWL--RMSEPPDT 199
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL L
Sbjct: 200 VVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPVAVSTDDNMALCLDN 259
Query: 255 KPD-IAMRRLMQGFGLKS 271
+ + ++Q +G K+
Sbjct: 260 TEQAVQLIPVLQRYGFKT 277
>gi|304312822|ref|YP_003812420.1| Glutamate racemase [gamma proteobacterium HdN1]
gi|301798555|emb|CBL46785.1| Glutamate racemase [gamma proteobacterium HdN1]
Length = 276
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
S+++FDSGIGGL V +++R MP YVAD+ FPYG ++ L +R+ L + +
Sbjct: 10 SVILFDSGIGGLSVAREIRAAMPGLDINYVADNRIFPYGLQKESVLIERVCALMPILEAR 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y P VIACN+A T++ D LR T + +G VPAIK AAA +Q +I +L+TP T++R
Sbjct: 70 YSPGAIVIACNSASTVVLDALR-TQTQVPVIGVVPAIKPAAAQSQRRVIGLLATPGTIQR 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT LI + + C + LV S L S E GI I E+ I F E D+
Sbjct: 129 SYTRRLIDQFANDCTVLLVGSSALVSLAENKLRGIPIDLQEVSN-IVAPFCHAETP-PDI 186
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+P + Q+ P +D+ ++IARR R +L
Sbjct: 187 VVLGCTHFPFLREELMQVLPENTRLIDSGEAIARRTRHIL 226
>gi|126667191|ref|ZP_01738165.1| glutamate racemase [Marinobacter sp. ELB17]
gi|126628347|gb|EAZ98970.1| glutamate racemase [Marinobacter sp. ELB17]
Length = 280
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 134/267 (50%), Gaps = 18/267 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
S+L+FDSG+GGL V +R P +Y+AD+ GFPYG+ + + +R L + L +
Sbjct: 8 SVLVFDSGVGGLSVAASIRRRCPHLPLVYLADNAGFPYGDKPEEEVTRRTCNLVTSALSQ 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + V+ACNTA T+ LR S A +G VPAIK AAA + + I IL+TPAT+ R
Sbjct: 68 FDCQIVVLACNTASTVALPALRQCV-SEAVVGVVPAIKPAAAISVNRRIGILATPATVAR 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+Y LI Y + C + + L E A G + + + + + E D
Sbjct: 127 SYLDQLIADYAADCQVSRIGHPSLVHWAEGLARGEPVPQSRLAE----ILVPFELAGVDT 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD------- 247
+VL CTHYPL++ +Q +P W+D+ D+IARR LL + + Q +
Sbjct: 183 VVLGCTHYPLLLPALKQAAPGVRFWVDSGDAIARRVEQLLAFLKSAQPQALTSRLQPGMP 242
Query: 248 -----HALFLSGKPDIAMRRLMQGFGL 269
ALF + P + M G GL
Sbjct: 243 PKPLQQALFSASAPP-GIECFMTGLGL 268
>gi|119476761|ref|ZP_01617071.1| glutamate racemase [marine gamma proteobacterium HTCC2143]
gi|119450017|gb|EAW31253.1| glutamate racemase [marine gamma proteobacterium HTCC2143]
Length = 280
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 124/219 (56%), Gaps = 1/219 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL ++Q +R +P Y+AD++ FPYG +D L R + S + Y
Sbjct: 19 ILVFDSGVGGLSIVQHIRLHVPHATITYLADNLFFPYGVLDDQTLLSRTCEIVSWAHNHY 78
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
QP L V+ACN+A TL+ LR+ + +G VPAIK AAA + + +I +L+TPAT++R
Sbjct: 79 QPSLIVLACNSASTLVLPHLRAIL-GVPVVGVVPAIKPAAAMSTTNVIGLLATPATIQRD 137
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + C + V S L VE G+K E+EIK + D +
Sbjct: 138 YTDELIAEFAPHCEVIKVGSAALVDFVERKMAGLKPTENEIKHILSLFNQHPRWSSVDTV 197
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VLACTH+PL+ +P W+D+ D++ARR LL
Sbjct: 198 VLACTHFPLVKRELSDAAPSIKHWVDSGDAVARRVTSLL 236
>gi|330444840|ref|ZP_08308495.1| glutamate racemase [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489150|dbj|GAA02992.1| glutamate racemase [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 269
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 126/219 (57%), Gaps = 6/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D L +R ++ S ++++Y
Sbjct: 7 IVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELPDDVLIERTNYIVSTLVEQY 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q L VIACNTA T++ LR ++ +G VPAIK AA +Q+ +I +L+TPAT++R+
Sbjct: 67 QADLVVIACNTASTIVLPTLRKHL-TVPVVGVVPAIKPAAKLSQTKVIGLLATPATVKRS 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + S C + ++ S L E+ G I DE+ + ++ D I
Sbjct: 126 YTQQLISQFASDCEVKMIGSTRLVEMAEQKLRGEAISLDELSD-----ILAPWQQQVDSI 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+L CTH+PLI + + V +D+ +IA R LL
Sbjct: 181 ILGCTHFPLIKDEIQAVLNNDVYIVDSGKAIANRVASLL 219
>gi|89074505|ref|ZP_01160982.1| glutamate racemase [Photobacterium sp. SKA34]
gi|89049793|gb|EAR55343.1| glutamate racemase [Photobacterium sp. SKA34]
Length = 270
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 126/219 (57%), Gaps = 6/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D+ L +R + S ++++Y
Sbjct: 7 IVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELPDNVLIERTNHIVSTLVEQY 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q L VIACNTA T++ LR ++ +G VPAIK AA +Q+ +I +L+TPAT++R
Sbjct: 67 QADLVVIACNTASTIVLPTLRQNL-NIPIVGVVPAIKPAAKLSQTKVIGLLATPATVKRE 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI+ + S C + ++ S L E+ G I E+ + + ++ D I
Sbjct: 126 YTQQLINQFASDCEVKMIGSTRLVEMAEQKLRGEAISLHELSE-----ILAPWQQQVDSI 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+L CTH+PLI + + V +D+ +IA R LL
Sbjct: 181 ILGCTHFPLIKEEIKAVLNNEVSIVDSGKAIAVRVSSLL 219
>gi|188532303|ref|YP_001906100.1| glutamate racemase [Erwinia tasmaniensis Et1/99]
gi|229486272|sp|B2VGA6|MURI_ERWT9 RecName: Full=Glutamate racemase
gi|188027345|emb|CAO95190.1| Glutamate racemase [Erwinia tasmaniensis Et1/99]
Length = 283
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 145/261 (55%), Gaps = 4/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + + +
Sbjct: 20 LRPTVLIFDSGVGGLSVYNEIRTLLPDLHYLYAFDNVAFPYGEKSEAFIVERVLDIVTAV 79
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T
Sbjct: 80 TGLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT L+ + +C ++ S L E G + +E+++ ++ + +
Sbjct: 139 VKRPYTHELVARFAGECKTEMLGSGELVDIAEAKLHGQPVAIEEVRRILQPWL--RMAEP 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL
Sbjct: 197 PDTVVLGCTHFPLISEELQQVLPQGTRLIDSGAAIARRTVWLLENESPEVLSADDNMALC 256
Query: 252 LS-GKPDIAMRRLMQGFGLKS 271
L + + + ++Q +G K+
Sbjct: 257 LEITEQTVQLIPVLQRYGFKT 277
>gi|253991699|ref|YP_003043055.1| glutamate racemase [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253783149|emb|CAQ86314.1| glutamate racemase [Photorhabdus asymbiotica]
Length = 268
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K ++ ++L+FDSG+GGL V Q++R L+P+ H+IYV D+ FPYG + + +R++ + S
Sbjct: 3 KTVRPTVLVFDSGVGGLSVYQEIRQLLPDLHYIYVFDNEAFPYGEKSEEFIIERVVEIVS 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ K+ + VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T
Sbjct: 63 AVQQKHPLAIVVIACNTASTVSLPALRERF-HFSVVGVVPAIKPAAKLTCNGIVGLLATR 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R+YT LI + + C I + S L E G K+ + +K+ ++ KE
Sbjct: 122 ATVNRSYTKELIERFAADCRIESIGSAELVELAEAKLHGNKVSSEALKQILKPWLKMKEP 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PL+ Q+ P +D+ +IARR L+ D A
Sbjct: 182 P--DTVVLGCTHFPLLAEELIQVLPDGTRLIDSGAAIARRTAWLVKHQENLVCTSIDSLA 239
Query: 250 LFLSGKPDI-AMRRLMQGFG 268
+ D A+ ++Q +G
Sbjct: 240 YCMKMNVDTDALIPVLQAYG 259
>gi|296116308|ref|ZP_06834924.1| glutamate racemase [Gluconacetobacter hansenii ATCC 23769]
gi|295977127|gb|EFG83889.1| glutamate racemase [Gluconacetobacter hansenii ATCC 23769]
Length = 278
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 124/224 (55%), Gaps = 1/224 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL FDSGIGGL +++ +R +P Y+AD FPYG D L R++ L + +
Sbjct: 3 ILAFDSGIGGLGIVRCLRTDLPGARIDYLADTAVFPYGEQADDFLVTRILTLVGQAIARL 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L VIACNTA TL D LR+ + F+G VP IK AA TQSG I +L+T ATL R
Sbjct: 63 RPDLVVIACNTASTLALDALRARH-RLPFVGCVPPIKWAADLTQSGTIGLLATRATLTRP 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y SNL + + C + + LA E G + E I+ E++G F + G DV+
Sbjct: 122 YLSNLRNRFAPGCTLITYGARNLADLSELAFRGRPVPERAIRMEMDGLFSQPGGDAIDVV 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
L CTHY ++ F++L + W+D + +++R+A L + T
Sbjct: 182 GLGCTHYTFLLDRFQRLGRPGLRWIDPAQAVSRQATRLAHNLGT 225
>gi|16767395|ref|NP_463010.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|207859320|ref|YP_002245971.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|17865743|sp|P40723|MURI_SALTY RecName: Full=Glutamate racemase
gi|226707589|sp|B5QXR2|MURI_SALEP RecName: Full=Glutamate racemase
gi|16422698|gb|AAL22969.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|206711123|emb|CAR35497.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|267996437|gb|ACY91322.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160637|emb|CBW20168.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|320088535|emb|CBY98294.1| Glutamate racemase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|323132476|gb|ADX19906.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|326625851|gb|EGE32196.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
gi|332990959|gb|AEF09942.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 283
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 135/238 (56%), Gaps = 7/238 (2%)
Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56
++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG
Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA
Sbjct: 65 ETFIVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+
Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 184 RRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|238892365|ref|YP_002917099.1| glutamate racemase [Klebsiella pneumoniae NTUH-K2044]
gi|238544681|dbj|BAH61032.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 283
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 131/234 (55%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + ++L+FDSG+GGL V ++R L+P H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQQRYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+E D +VL CTH+PL+ +++ P +D+ +IARR LL
Sbjct: 188 RPWLRMQEPP--DTVVLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLL 239
>gi|56415968|ref|YP_153043.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62182590|ref|YP_219007.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161486778|ref|NP_807142.2| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|161501913|ref|NP_457929.2| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|197364895|ref|YP_002144532.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|22001825|sp|Q8Z315|MURI_SALTI RecName: Full=Glutamate racemase
gi|75479264|sp|Q57H86|MURI_SALCH RecName: Full=Glutamate racemase
gi|81599685|sp|Q5PK79|MURI_SALPA RecName: Full=Glutamate racemase
gi|229486290|sp|B5BJP1|MURI_SALPK RecName: Full=Glutamate racemase
gi|56130225|gb|AAV79731.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62130223|gb|AAX67926.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|197096372|emb|CAR61977.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|322717091|gb|EFZ08662.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 283
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 135/238 (56%), Gaps = 7/238 (2%)
Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56
++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG
Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA
Sbjct: 65 ETFIVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+
Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 184 RRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|310766063|gb|ADP11013.1| glutamate racemase [Erwinia sp. Ejp617]
Length = 283
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 143/260 (55%), Gaps = 4/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + + +
Sbjct: 20 LRPTVLIFDSGVGGLSVYNEIRALLPDLHYLYAFDNVAFPYGEKSEEFIVERVVAIVTAV 79
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T
Sbjct: 80 TRLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + +C ++ S L E G + +E+++ ++ E
Sbjct: 139 VKRPYTHELIARFAGECKTEMLGSGELVEIAEAKLHGQPVALEEVRRILQPWLRMPEPP- 197
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL
Sbjct: 198 -DTVVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPEALSADDNMALC 256
Query: 252 LS-GKPDIAMRRLMQGFGLK 270
+ + + + ++Q +G K
Sbjct: 257 MGITEQAVQLIPVLQRYGFK 276
>gi|206577595|ref|YP_002241172.1| glutamate racemase [Klebsiella pneumoniae 342]
gi|288937809|ref|YP_003441868.1| glutamate racemase [Klebsiella variicola At-22]
gi|290513035|ref|ZP_06552398.1| glutamate racemase [Klebsiella sp. 1_1_55]
gi|226707588|sp|B5XZ09|MURI_KLEP3 RecName: Full=Glutamate racemase
gi|206566653|gb|ACI08429.1| glutamate racemase [Klebsiella pneumoniae 342]
gi|288892518|gb|ADC60836.1| glutamate racemase [Klebsiella variicola At-22]
gi|289774417|gb|EFD82422.1| glutamate racemase [Klebsiella sp. 1_1_55]
Length = 283
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 131/234 (55%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + ++L+FDSG+GGL V ++R L+P H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQQRYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+E D +VL CTH+PL+ +++ P +D+ +IARR LL
Sbjct: 188 RPWLRMQEPP--DTVVLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLL 239
>gi|205354293|ref|YP_002228094.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|226707590|sp|B5REZ1|MURI_SALG2 RecName: Full=Glutamate racemase
gi|205274074|emb|CAR39081.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|326629417|gb|EGE35760.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 283
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 135/238 (56%), Gaps = 7/238 (2%)
Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56
++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG
Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA
Sbjct: 65 ETFIVERVVEIATAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+
Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 184 RRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|294011705|ref|YP_003545165.1| glutamate racemase [Sphingobium japonicum UT26S]
gi|292675035|dbj|BAI96553.1| glutamate racemase [Sphingobium japonicum UT26S]
Length = 267
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 115/217 (52%), Gaps = 1/217 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +L FDSG+GGL +L + +P +Y AD GFPYG + + R+ L ++
Sbjct: 6 QAPLLFFDSGVGGLSILAPAQAALPHAPVVYAADSAGFPYGTRSEAEIAARVPALLGRLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y+P L+VIACNTA T+ +R+ + +G VPAIK AA +QS + +L T AT+
Sbjct: 66 ERYRPRLAVIACNTASTIALSAVRAAL-DIPVVGTVPAIKPAALLSQSRVFGVLGTDATV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R+ Y L + S C + S L E G + + + G F + G R
Sbjct: 125 RQPYVDRLAAEHGSDCTVLRHGSAALVQLAEAKLRGEPLDPAVARDALAGLFDQPGGDRM 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D++VLACTH+PL+ SP P+ ++ + IARR
Sbjct: 185 DIVVLACTHFPLVEAELAAASPRPLRFVHGGEGIARR 221
>gi|330861644|emb|CBX71822.1| glutamate racemase [Yersinia enterocolitica W22703]
Length = 287
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 147/275 (53%), Gaps = 17/275 (6%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
K D P + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG +
Sbjct: 19 KADTAP-----RPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIV 73
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+R++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G
Sbjct: 74 ERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNG 132
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++ +L+T T+ +YT +LI + + C I L+ S L E G + ++ +KK +
Sbjct: 133 VVGLLATRGTVHASYTQDLIERFATDCKIELLGSSELVELAETKLHGGVVPKEALKKILH 192
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+E D IVL CTH+PL+ Q+ P +D+ +IARR L I++ +
Sbjct: 193 PWLAMREPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWL---ISSQE 247
Query: 242 TRVFDD-----HALFLSGKPDIAMRRLMQGFGLKS 271
+ D + + L+ D A+ ++QG+G S
Sbjct: 248 NMISSDEENIAYCMALNADTD-ALLPVLQGYGFPS 281
>gi|332185464|ref|ZP_08387212.1| glutamate racemase [Sphingomonas sp. S17]
gi|332014442|gb|EGI56499.1| glutamate racemase [Sphingomonas sp. S17]
Length = 286
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 1/214 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL FDSG+GGL + R +P F+YVAD GFPYG + + R+ L + ++Y
Sbjct: 28 ILFFDSGVGGLSIAGPARMALPTAPFVYVADSAGFPYGEKSEAEIAGRVPALLGRLAERY 87
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L VIACNTA T+ +R+ + +G VPAIK AA +++ I +L T AT+R+
Sbjct: 88 RPRLIVIACNTASTIALPAVRAAL-DLPVVGTVPAIKPAALMSETRTIGVLGTRATVRQA 146
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y +L + S C + S L E G + + ++G F ++ G+ DVI
Sbjct: 147 YVDDLAARFASDCRVIRHGSAALVELAEAKLRGETLSSESFTAVLDGLFGQEGGEAIDVI 206
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
V ACTH+PL+ +P PV ++D IARR
Sbjct: 207 VNACTHFPLVEAELAAAAPHPVRFVDGGPGIARR 240
>gi|300714768|ref|YP_003739571.1| glutamate racemase [Erwinia billingiae Eb661]
gi|299060604|emb|CAX57711.1| Glutamate racemase [Erwinia billingiae Eb661]
Length = 260
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V +++R LMP+ H++Y D+V FPYG + + R++ + + +Y
Sbjct: 1 MLVFDSGVGGLSVYEELRQLMPDLHYLYAFDNVAFPYGEKSEEFIVHRVVDIVEAVTRRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACN+A T+ LR+ F +G VPAIK AA T++G++ +L+T T++R
Sbjct: 61 PLALVVIACNSASTVTLPALRARF-DFPVVGVVPAIKPAARLTRNGIVGLLATRGTVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT L+ + S+C ++ S L E G + +E+++ ++ KE D +
Sbjct: 120 YTHELVARFASECKTEMLGSAELVELAEAKLQGKPVPLEEVRRILQPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ +Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLNEELQQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|123440538|ref|YP_001004532.1| glutamate racemase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|166231066|sp|A1JI42|MURI_YERE8 RecName: Full=Glutamate racemase
gi|122087499|emb|CAL10280.1| putative glutamate racemase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 287
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 147/275 (53%), Gaps = 17/275 (6%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
K D P + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG +
Sbjct: 19 KADTAP-----RPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIV 73
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+R++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G
Sbjct: 74 ERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNG 132
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++ +L+T T+ +YT +LI + + C I L+ S L E G + ++ +KK +
Sbjct: 133 VVGLLATRGTVHASYTQDLIERFATDCKIELLGSSELVELAETKLHGGVVPKEALKKILH 192
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+E D IVL CTH+PL+ Q+ P +D+ +IARR L I++ +
Sbjct: 193 PWLAMREPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWL---ISSQE 247
Query: 242 TRVFDD-----HALFLSGKPDIAMRRLMQGFGLKS 271
+ D + + L+ D A+ ++QG+G S
Sbjct: 248 NVISSDEENIAYCMALNADTD-ALLPVLQGYGFPS 281
>gi|209696283|ref|YP_002264214.1| glutamate racemase [Aliivibrio salmonicida LFI1238]
gi|226707584|sp|B6ENT1|MURI_ALISL RecName: Full=Glutamate racemase
gi|208010237|emb|CAQ80568.1| glutamate racemase [Aliivibrio salmonicida LFI1238]
Length = 265
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 135/233 (57%), Gaps = 14/233 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +ILIFDSGIGGL V + +R+ +P +IY D+ GFPYG + L +R ++ +
Sbjct: 1 MPKNILIFDSGIGGLSVFKDIRYQIPLAKYIYAFDNAGFPYGELTEDILIERTSYIIQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + VIACNTA T++ LR T S+ +G VPAIK AA +Q I +L+TPAT
Sbjct: 61 CHRHKIDIVVIACNTASTVVLPTLR-TLLSIPVVGVVPAIKPAALVSQK--IGLLATPAT 117
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKE 188
++R+YT +LI S+ S + L+ S L EE GI I+ DEI K +G
Sbjct: 118 IKRSYTFDLIKSFASISDVKLLGSTRLVEMAEEKMVGIPVNLIELDEILKSWKG------ 171
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D IVL CTH+P + +++ V +D+ ++IARR + LL ++ ++
Sbjct: 172 --QVDCIVLGCTHFPFLRKEIKEILGRNVLLIDSGEAIARRVKQLLGSVDANK 222
>gi|331685713|ref|ZP_08386296.1| glutamate racemase [Escherichia coli H299]
gi|323964327|gb|EGB59810.1| glutamate racemase [Escherichia coli M863]
gi|331077184|gb|EGI48399.1| glutamate racemase [Escherichia coli H299]
Length = 289
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243
>gi|331680091|ref|ZP_08380753.1| glutamate racemase [Escherichia coli H591]
gi|332282913|ref|ZP_08395326.1| glutamate racemase [Shigella sp. D9]
gi|323943616|gb|EGB39723.1| glutamate racemase [Escherichia coli H120]
gi|324115516|gb|EGC09457.1| glutamate racemase [Escherichia coli E1167]
gi|331072417|gb|EGI43750.1| glutamate racemase [Escherichia coli H591]
gi|332105265|gb|EGJ08611.1| glutamate racemase [Shigella sp. D9]
Length = 289
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243
>gi|58040425|ref|YP_192389.1| glutamate racemase [Gluconobacter oxydans 621H]
gi|58002839|gb|AAW61733.1| Glutamate racemase [Gluconobacter oxydans 621H]
Length = 281
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 118/218 (54%), Gaps = 1/218 (0%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSGIGG+ V+Q +R L+P H Y+AD FPYG D L R++ L ++ Q
Sbjct: 13 LVFDSGIGGMGVVQALRDLLPALHIDYLADTALFPYGEQPDDLLTSRIVSLLVAACERLQ 72
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + VIACNTA T+ LR ++ +G VP I+ A ++S +I +LST AT RR Y
Sbjct: 73 PDVLVIACNTASTIALPALRQRL-NIPVVGCVPPIRWAGRVSESRVIGLLSTSATARRPY 131
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
L + C + + LA E G I + +++ E+ F + G D +
Sbjct: 132 ILQLHRDFAPDCRLITHGARRLADLAERAFLGEPIADSDVQYELTCLFSQPHGGEIDTVG 191
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
L CTHY ++ F +LSP + WLD + ++AR+ R +L
Sbjct: 192 LGCTHYTFLMDAFERLSPPGITWLDPAPAVARQVRTVL 229
>gi|197287060|ref|YP_002152932.1| glutamate racemase [Proteus mirabilis HI4320]
gi|229486247|sp|B4F1H6|MURI_PROMH RecName: Full=Glutamate racemase
gi|194684547|emb|CAR46364.1| glutamate racemase [Proteus mirabilis HI4320]
Length = 288
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 133/229 (58%), Gaps = 4/229 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL + +++R +P+ H+IYV D+ FPYG + +R++ + S + +
Sbjct: 27 TVLVFDSGVGGLSIYREIREKLPDAHYIYVFDNEAFPYGEKPQEFIIERVVRIVSAVAQQ 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 87 HELAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLATRATVKR 146
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + ++C +HL+ S L E+ G K+ DE+++ + KE D
Sbjct: 147 PYTHELIERFATECKVHLLGSAELVELAEKKLHGEKVSCDELRRILAPWLKMKEPP--DT 204
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+VL CTH+PL+ + P +D+ +IARR L+ +N + R
Sbjct: 205 VVLGCTHFPLLEEELLSVLPDGTRIIDSGGAIARRTAWLV--VNQDKIR 251
>gi|326387672|ref|ZP_08209278.1| glutamate racemase [Novosphingobium nitrogenifigens DSM 19370]
gi|326207718|gb|EGD58529.1| glutamate racemase [Novosphingobium nitrogenifigens DSM 19370]
Length = 285
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 125/247 (50%), Gaps = 7/247 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSG+GGL VL KMR L+P+ IYVAD+ G PYG + + R+ L + +
Sbjct: 26 QPILMFDSGVGGLSVLAKMRLLLPQAPVIYVADNAGLPYGQKTEAQIAARVSGLLGRMTE 85
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R
Sbjct: 86 RLHPRLVCIACNTASTIALASVREVL-EVPIVGTVPAIKPAAAMTKTGVIGLLGTEATIR 144
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ Y L + + + + L + E G + + + +G R D
Sbjct: 145 QGYVDRLESEFAADKRLLRHGAPELVTAAEARLRGRDVDPAVFARAAQALRSMPDGDRID 204
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251
+VLACTH+PLI Q V ++D SD IARR + + Q R D ALF
Sbjct: 205 TVVLACTHFPLIERDLAQAFGPDVRFIDGSDGIARR----IAHLTQGQEFLRKEPDLALF 260
Query: 252 LSGKPDI 258
PD+
Sbjct: 261 TRADPDL 267
>gi|157157092|ref|YP_001465466.1| glutamate racemase [Escherichia coli E24377A]
gi|157163444|ref|YP_001460762.1| glutamate racemase [Escherichia coli HS]
gi|209921453|ref|YP_002295537.1| glutamate racemase [Escherichia coli SE11]
gi|218556530|ref|YP_002389444.1| glutamate racemase [Escherichia coli IAI1]
gi|218697683|ref|YP_002405350.1| glutamate racemase [Escherichia coli 55989]
gi|256021672|ref|ZP_05435537.1| glutamate racemase [Shigella sp. D9]
gi|260846776|ref|YP_003224554.1| glutamate racemase MurI [Escherichia coli O103:H2 str. 12009]
gi|260858085|ref|YP_003231976.1| glutamate racemase MurI [Escherichia coli O26:H11 str. 11368]
gi|260870687|ref|YP_003237089.1| glutamate racemase MurI [Escherichia coli O111:H- str. 11128]
gi|293472282|ref|ZP_06664692.1| glutamate racemase [Escherichia coli B088]
gi|307314705|ref|ZP_07594302.1| glutamate racemase [Escherichia coli W]
gi|331670825|ref|ZP_08371661.1| glutamate racemase [Escherichia coli TA271]
gi|167017315|sp|A7ZUI7|MURI_ECO24 RecName: Full=Glutamate racemase
gi|167017316|sp|A8A775|MURI_ECOHS RecName: Full=Glutamate racemase
gi|226707585|sp|B6I5I5|MURI_ECOSE RecName: Full=Glutamate racemase
gi|226722985|sp|B7M723|MURI_ECO8A RecName: Full=Glutamate racemase
gi|254766114|sp|B7LA65|MURI_ECO55 RecName: Full=Glutamate racemase
gi|157069124|gb|ABV08379.1| glutamate racemase [Escherichia coli HS]
gi|157079122|gb|ABV18830.1| glutamate racemase [Escherichia coli E24377A]
gi|209914712|dbj|BAG79786.1| glutamate racemase [Escherichia coli SE11]
gi|218354415|emb|CAV01209.1| glutamate racemase [Escherichia coli 55989]
gi|218363299|emb|CAR00948.1| glutamate racemase [Escherichia coli IAI1]
gi|257756734|dbj|BAI28236.1| glutamate racemase MurI [Escherichia coli O26:H11 str. 11368]
gi|257761923|dbj|BAI33420.1| glutamate racemase MurI [Escherichia coli O103:H2 str. 12009]
gi|257767043|dbj|BAI38538.1| glutamate racemase MurI [Escherichia coli O111:H- str. 11128]
gi|291321376|gb|EFE60816.1| glutamate racemase [Escherichia coli B088]
gi|306905760|gb|EFN36286.1| glutamate racemase [Escherichia coli W]
gi|315063302|gb|ADT77629.1| glutamate racemase [Escherichia coli W]
gi|323380635|gb|ADX52903.1| glutamate racemase [Escherichia coli KO11]
gi|331062080|gb|EGI34003.1| glutamate racemase [Escherichia coli TA271]
Length = 285
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|227354692|ref|ZP_03839111.1| glutamate racemase [Proteus mirabilis ATCC 29906]
gi|227165202|gb|EEI50027.1| glutamate racemase [Proteus mirabilis ATCC 29906]
Length = 288
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 133/229 (58%), Gaps = 4/229 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL + +++R +P+ H+IYV D+ FPYG + +R++ + S + +
Sbjct: 27 TVLVFDSGVGGLSIYREIREKLPDAHYIYVFDNEAFPYGEKPQEFIIERVVRIVSAVAQQ 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 87 HELAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLATRATVKR 146
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + ++C +HL+ S L E+ G K+ DE+++ + KE D
Sbjct: 147 PYTHELIERFATECKVHLLGSAELVELAEKKLHGEKVSCDELRRILAPWLKMKEPP--DT 204
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+VL CTH+PL+ + P +D+ +IARR L+ +N + R
Sbjct: 205 VVLGCTHFPLLEEELLSVLPDGTRIIDSGGAIARRTAWLV--VNQDKIR 251
>gi|90581103|ref|ZP_01236903.1| glutamate racemase [Vibrio angustum S14]
gi|90437799|gb|EAS62990.1| glutamate racemase [Vibrio angustum S14]
Length = 270
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 6/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D+ L +R + S ++++Y
Sbjct: 7 IVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELADNILIERTNHIVSALVEQY 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR ++ +G VPAIK AA + + +I +L+TPAT++R
Sbjct: 67 KADLVVIACNTASTIVLPTLRQNL-NIPIVGVVPAIKPAAKLSNTKVIGLLATPATVKRE 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI+ + S C + ++ S L E+ G I +E+ + + ++ D I
Sbjct: 126 YTQQLINQFASDCEVKMIGSTRLVEMAEQKLRGESISLNELSE-----ILAPWQQQVDSI 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+L CTH+PLI + + V +D+ +IA R LL
Sbjct: 181 ILGCTHFPLIKEEIKAVLRNEVSVVDSGKAIALRVSSLL 219
>gi|331660531|ref|ZP_08361465.1| glutamate racemase [Escherichia coli TA206]
gi|331052480|gb|EGI24517.1| glutamate racemase [Escherichia coli TA206]
Length = 289
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 133/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+S +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSSAAIARRTAWLL 243
>gi|218551040|ref|YP_002384831.1| glutamate racemase [Escherichia fergusonii ATCC 35469]
gi|226722986|sp|B7LUM6|MURI_ESCF3 RecName: Full=Glutamate racemase
gi|218358581|emb|CAQ91229.1| glutamate racemase [Escherichia fergusonii ATCC 35469]
Length = 285
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 133/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKNEDFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|331655667|ref|ZP_08356659.1| glutamate racemase [Escherichia coli M718]
gi|12518894|gb|AAG59171.1|AE005628_7 glutamate racemase, required for biosynthesis of D-glutamate and
peptidoglycan [Escherichia coli O157:H7 str. EDL933]
gi|13364374|dbj|BAB38321.1| glutamate racemase [Escherichia coli O157:H7 str. Sakai]
gi|73857946|gb|AAZ90653.1| glutamate racemase [Shigella sonnei Ss046]
gi|81242998|gb|ABB63708.1| glutamate racemase [Shigella dysenteriae Sd197]
gi|81247728|gb|ABB68436.1| glutamate racemase [Shigella boydii Sb227]
gi|209751918|gb|ACI74266.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751920|gb|ACI74267.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751922|gb|ACI74268.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751924|gb|ACI74269.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751926|gb|ACI74270.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|331046768|gb|EGI18853.1| glutamate racemase [Escherichia coli M718]
Length = 289
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243
>gi|324111408|gb|EGC05389.1| glutamate racemase [Escherichia fergusonii B253]
Length = 285
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 133/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKNEDFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|254039229|ref|ZP_04873279.1| glutamate synthase [Escherichia sp. 1_1_43]
gi|331644705|ref|ZP_08345824.1| glutamate racemase [Escherichia coli H736]
gi|42876|emb|CAA23637.1| unnamed protein product [Escherichia coli]
gi|42878|emb|CAA23638.1| unnamed protein product [Escherichia coli]
gi|290428|gb|AAA23677.1| glutamate synthase [Escherichia coli]
gi|396314|gb|AAC43073.1| glutamate synthase [Escherichia coli str. K-12 substr. MG1655]
gi|226838665|gb|EEH70694.1| glutamate synthase [Escherichia sp. 1_1_43]
gi|323934456|gb|EGB30869.1| glutamate racemase [Escherichia coli E1520]
gi|323939048|gb|EGB35266.1| glutamate racemase [Escherichia coli E482]
gi|323969719|gb|EGB65003.1| glutamate racemase [Escherichia coli TA007]
gi|331036167|gb|EGI08403.1| glutamate racemase [Escherichia coli H736]
Length = 289
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243
>gi|331675461|ref|ZP_08376211.1| glutamate racemase [Escherichia coli TA280]
gi|331067521|gb|EGI38926.1| glutamate racemase [Escherichia coli TA280]
Length = 289
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243
>gi|320539067|ref|ZP_08038738.1| glutamate racemase [Serratia symbiotica str. Tucson]
gi|320030705|gb|EFW12713.1| glutamate racemase [Serratia symbiotica str. Tucson]
Length = 287
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S + +
Sbjct: 27 TVLVFDSGVGGLSVYQEVRQLLPDLHYIYTFDNVAFPYGEKSEEFIVERVLEITSAVQQR 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ +IACNTA T+ LR F S +G VPAIK AA +T +G++ +L+T T++R
Sbjct: 87 HPMVMVIIACNTASTISLSALRERF-SFPVVGVVPAIKPAARFTANGIVGLLATRGTVQR 145
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT LI + + C I L+ S L E G + +KK + K + D
Sbjct: 146 SYTHELIARFATDCKIELLGSSELVELAEAKLHGETVPLVTLKKILHPWL--KMSEPPDT 203
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+PL+ + P +D+ +IARR L+ + D+ A ++
Sbjct: 204 VVLGCTHFPLLAEELTLVLPEGTRLVDSGAAIARRTAWLISTQENLLSTQEDNLAYCMAL 263
Query: 255 KPDI-AMRRLMQGFGLKS 271
+ A+ ++Q +G K+
Sbjct: 264 DENTDALLPILQRYGFKT 281
>gi|293413408|ref|ZP_06656069.1| glutamate racemase [Escherichia coli B354]
gi|291468156|gb|EFF10654.1| glutamate racemase [Escherichia coli B354]
Length = 289
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEGVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243
>gi|290477203|ref|YP_003470120.1| glutamate racemase [Xenorhabdus bovienii SS-2004]
gi|289176553|emb|CBJ83362.1| glutamate racemase [Xenorhabdus bovienii SS-2004]
Length = 287
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 142/262 (54%), Gaps = 8/262 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + +ILIFDSG+GGL V Q++R L+PE H+IY D+ FPYG + +R++ +
Sbjct: 22 KTARPTILIFDSGVGGLSVYQEIRQLLPELHYIYAFDNEAFPYGEKTAEVIIERVVQVVD 81
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+I ++ + +IACNTA T+ LR F S +G VPAIK AA T + +I +L+T
Sbjct: 82 EIQKRHPLAIVIIACNTASTVSLPALRERF-SFPVVGVVPAIKPAAKLTCNRVIGLLATR 140
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R YT LI + + C +H + S L E G KI + ++K ++ KE
Sbjct: 141 ATVNRDYTKELIARFATDCQVHSIGSAELVELAERKLHGEKIPLEILEKILKPWLRMKEP 200
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTH+PLI Q+ P +D+ +IARR L+ N+ D+
Sbjct: 201 P--DTVILGCTHFPLIAEELSQVFPDGTRLIDSGAAIARRTVWLVKNQNSLFLTTADN-- 256
Query: 250 LFLSGKPDI---AMRRLMQGFG 268
L K D+ A+R +++ +G
Sbjct: 257 LAYCTKIDLNSEALRPVLRDYG 278
>gi|262041735|ref|ZP_06014926.1| glutamate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259040922|gb|EEW42002.1| glutamate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 260
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R
Sbjct: 61 SLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S L E G + +E+++ + +E D +
Sbjct: 120 YTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ +++ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLL 216
>gi|256025994|ref|ZP_05439859.1| glutamate racemase [Escherichia sp. 4_1_40B]
Length = 285
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTIKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|323974257|gb|EGB69387.1| glutamate racemase [Escherichia coli TW10509]
Length = 289
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243
>gi|331665623|ref|ZP_08366521.1| glutamate racemase [Escherichia coli TA143]
gi|331057308|gb|EGI29298.1| glutamate racemase [Escherichia coli TA143]
Length = 289
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243
>gi|152972756|ref|YP_001337902.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|330001329|ref|ZP_08303946.1| hypothetical protein HMPREF9538_01616 [Klebsiella sp. MS 92-3]
gi|150957605|gb|ABR79635.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|328537720|gb|EGF63925.1| hypothetical protein HMPREF9538_01616 [Klebsiella sp. MS 92-3]
Length = 260
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R
Sbjct: 61 PLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S L E G + +E+++ + +E D +
Sbjct: 120 YTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ +++ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLL 216
>gi|110807826|ref|YP_691346.1| glutamate racemase [Shigella flexneri 5 str. 8401]
gi|161367471|ref|NP_290606.2| glutamate racemase [Escherichia coli O157:H7 EDL933]
gi|161485830|ref|NP_709771.3| glutamate racemase [Shigella flexneri 2a str. 301]
gi|161486412|ref|NP_838913.2| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|161950019|ref|YP_405199.2| glutamate racemase [Shigella dysenteriae Sd197]
gi|161984807|ref|YP_410264.2| glutamate racemase [Shigella boydii Sb227]
gi|161986399|ref|YP_312888.2| glutamate racemase [Shigella sonnei Ss046]
gi|162139734|ref|NP_312925.2| glutamate racemase [Escherichia coli O157:H7 str. Sakai]
gi|254795974|ref|YP_003080811.1| glutamate racemase [Escherichia coli O157:H7 str. TW14359]
gi|261226407|ref|ZP_05940688.1| glutamate racemase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256807|ref|ZP_05949340.1| glutamate racemase [Escherichia coli O157:H7 str. FRIK966]
gi|291285389|ref|YP_003502207.1| Glutamate racemase [Escherichia coli O55:H7 str. CB9615]
gi|293417477|ref|ZP_06660101.1| glutamate racemase [Escherichia coli B185]
gi|54037865|sp|P63634|MURI_SHIFL RecName: Full=Glutamate racemase
gi|54041258|sp|P63633|MURI_ECO57 RecName: Full=Glutamate racemase
gi|123342230|sp|Q0SY24|MURI_SHIF8 RecName: Full=Glutamate racemase
gi|110617374|gb|ABF06041.1| glutamate racemase [Shigella flexneri 5 str. 8401]
gi|254595374|gb|ACT74735.1| glutamate racemase [Escherichia coli O157:H7 str. TW14359]
gi|281603361|gb|ADA76345.1| putative Glutamate racemase [Shigella flexneri 2002017]
gi|290765262|gb|ADD59223.1| Glutamate racemase [Escherichia coli O55:H7 str. CB9615]
gi|291430997|gb|EFF03993.1| glutamate racemase [Escherichia coli B185]
gi|320639143|gb|EFX08779.1| glutamate racemase [Escherichia coli O157:H7 str. G5101]
gi|320644535|gb|EFX13596.1| glutamate racemase [Escherichia coli O157:H- str. 493-89]
gi|320649859|gb|EFX18374.1| glutamate racemase [Escherichia coli O157:H- str. H 2687]
gi|320655208|gb|EFX23157.1| glutamate racemase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320660833|gb|EFX28283.1| glutamate racemase [Escherichia coli O55:H7 str. USDA 5905]
gi|320665951|gb|EFX32977.1| glutamate racemase [Escherichia coli O157:H7 str. LSU-61]
Length = 285
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|89110063|ref|AP_003843.1| glutamate racemase [Escherichia coli str. K-12 substr. W3110]
gi|90111671|ref|NP_418402.2| glutamate racemase [Escherichia coli str. K-12 substr. MG1655]
gi|170083436|ref|YP_001732756.1| glutamate racemase [Escherichia coli str. K-12 substr. DH10B]
gi|238903032|ref|YP_002928828.1| glutamate racemase [Escherichia coli BW2952]
gi|253775395|ref|YP_003038226.1| glutamate racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254163917|ref|YP_003047025.1| glutamate racemase [Escherichia coli B str. REL606]
gi|307140666|ref|ZP_07500022.1| glutamate racemase [Escherichia coli H736]
gi|730081|sp|P22634|MURI_ECOLI RecName: Full=Glutamate racemase
gi|229486276|sp|B1XBX8|MURI_ECODH RecName: Full=Glutamate racemase
gi|259509813|sp|C5A0R6|MURI_ECOBW RecName: Full=Glutamate racemase
gi|85676094|dbj|BAE77344.1| glutamate racemase [Escherichia coli str. K12 substr. W3110]
gi|87082355|gb|AAC76949.2| glutamate racemase [Escherichia coli str. K-12 substr. MG1655]
gi|169891271|gb|ACB04978.1| glutamate racemase [Escherichia coli str. K-12 substr. DH10B]
gi|238861332|gb|ACR63330.1| glutamate racemase [Escherichia coli BW2952]
gi|242379502|emb|CAQ34318.1| glutamate racemase [Escherichia coli BL21(DE3)]
gi|253326439|gb|ACT31041.1| glutamate racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975818|gb|ACT41489.1| glutamate racemase [Escherichia coli B str. REL606]
gi|253979974|gb|ACT45644.1| glutamate racemase [Escherichia coli BL21(DE3)]
gi|260451197|gb|ACX41619.1| glutamate racemase [Escherichia coli DH1]
gi|309704391|emb|CBJ03740.1| glutamate racemase [Escherichia coli ETEC H10407]
gi|315138532|dbj|BAJ45691.1| glutamate synthase [Escherichia coli DH1]
gi|323959264|gb|EGB54925.1| glutamate racemase [Escherichia coli H489]
Length = 285
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|209542243|ref|YP_002274472.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5]
gi|209529920|gb|ACI49857.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5]
Length = 272
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 1/228 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL FDSGIGG +++ +R +P Y+AD+ +PYG D L +R++ L
Sbjct: 1 MARRILAFDSGIGGFGIVRALRTRLPGVSLDYLADNAVYPYGEQPDTDLIRRIVALIGQA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+D P L VIACNTA TL LR + ++ F+G VP IK AA +++ I +L+T AT
Sbjct: 61 IDALDPDLVVIACNTASTLALPALRERY-ALPFVGCVPPIKWAAELSRTRTIGLLATRAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR Y +L Y C + + LA E G I D I +E++ F + G
Sbjct: 120 VRRPYLGDLQRRYAPDCTLLAHGARGLADLAECAFRGHAIATDAIDRELDALFGQPGGAA 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
DV+ + CTHY ++ R SP WLD ++++AR+A +L + T
Sbjct: 180 IDVVGIGCTHYTFLMDRLRAASPPGTIWLDPAEAVARQAATVLGPLGT 227
>gi|284924068|emb|CBG37167.1| glutamate racemase [Escherichia coli 042]
Length = 285
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|148556725|ref|YP_001264307.1| glutamate racemase [Sphingomonas wittichii RW1]
gi|148501915|gb|ABQ70169.1| glutamate racemase [Sphingomonas wittichii RW1]
Length = 264
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 119/214 (55%), Gaps = 1/214 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL VL R L+P+ ++YVAD+ GFPYG + + R+ L ++++Y
Sbjct: 7 ILMFDSGVGGLSVLAPTRALLPQASYVYVADNGGFPYGIRSEAEIAARVPALLGRLVERY 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L VIACNTA T+ +R+ + +G VPAIK AA + + I +L T AT+R+
Sbjct: 67 RPRLVVIACNTASTIALAAVRAAL-DLPIVGTVPAIKPAAERSAARAIGVLGTDATVRQP 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y +L + + C + S L E G + + ++G + G R D++
Sbjct: 126 YVDDLSARFAADCLVLRHGSARLVELAEAKLRGEPTDPADYRAVLDGLLGQPGGDRIDMV 185
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VLACTH+PL+ +P P+ ++D IARR
Sbjct: 186 VLACTHFPLVEAELAAAAPRPLRFVDGGPGIARR 219
>gi|259906847|ref|YP_002647203.1| glutamate racemase [Erwinia pyrifoliae Ep1/96]
gi|224962469|emb|CAX53924.1| Glutamate racemase [Erwinia pyrifoliae Ep1/96]
gi|283476639|emb|CAY72467.1| murI [Erwinia pyrifoliae DSM 12163]
Length = 283
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 141/257 (54%), Gaps = 4/257 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++LIFDSG+GGL V ++ L+P+ H++Y D+V FPYG + + +R+M + + +
Sbjct: 23 TVLIFDSGVGGLSVYNEICALLPDLHYLYAFDNVAFPYGEKSEEFIVERVMAIVTAVTRL 82
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T++R
Sbjct: 83 YPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGTVKR 141
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + +C ++ S L E G + +E+++ ++ + + D
Sbjct: 142 PYTHELIARFAGECKTEMLGSGELVEIAEAKLHGQPVALEEVRRILQPWL--RMPEPPDT 199
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS- 253
+VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL L
Sbjct: 200 VVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPEALSADDNMALCLDI 259
Query: 254 GKPDIAMRRLMQGFGLK 270
+ + + ++Q +G K
Sbjct: 260 TEQAVQLIPVLQRYGFK 276
>gi|218707594|ref|YP_002415113.1| glutamate racemase [Escherichia coli UMN026]
gi|218434691|emb|CAR15624.2| glutamate racemase [Escherichia coli UMN026]
Length = 289
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243
>gi|271502433|ref|YP_003335459.1| glutamate racemase [Dickeya dadantii Ech586]
gi|270345988|gb|ACZ78753.1| glutamate racemase [Dickeya dadantii Ech586]
Length = 290
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ + + +
Sbjct: 25 TVLVFDSGVGGLSVYDEVRKLLPDLHYIYAFDNEAFPYGEKPEQFIIERVLSIVEAVEKQ 84
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ L +IACNTA T+ LR+ F +G VPA+K AA T++G++ +L+T AT++R
Sbjct: 85 HPLSLVIIACNTASTISLPALRTRF-DFPVVGVVPAVKPAAKLTRNGVVGLLATRATVQR 143
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT LI + C I L+ S L E G + ED ++K + K + D
Sbjct: 144 SYTHELISRFAHDCQILLLGSAELVEFAEAKLQGESVSEDVLRKILRPWL--KLPEPPDT 201
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+PL+ + + P +D+ +IARR L+ ++ + + A LS
Sbjct: 202 VVLGCTHFPLLTEELQHVLPDGTRLVDSGSAIARRTAWLIEHLDNPKCSTEKNLAYCLSI 261
Query: 255 KPDI-AMRRLMQGFGLKS 271
P + A+ +++ +G S
Sbjct: 262 TPKVAALWPVLRRYGFHS 279
>gi|269103679|ref|ZP_06156376.1| glutamate racemase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163577|gb|EEZ42073.1| glutamate racemase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 273
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 131/242 (54%), Gaps = 7/242 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
++IFDSG+GGL V Q++R +P+ +IY D+ FPYG L +R + ++++ ++
Sbjct: 12 VVIFDSGVGGLSVYQEIRARLPQAQYIYAFDNAAFPYGELPQQVLIERACHIITNLVARH 71
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q L V+ACNTA T++ LR ++ +G VPAIK AA + S I +L+TPAT+ R
Sbjct: 72 QADLVVVACNTASTIVLPALRQQL-TIPVVGVVPAIKPAAQASLSKSIGLLATPATVERP 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +L+ + C + ++ + L EE G + +E+ + + + D I
Sbjct: 131 YTHDLVKQFAQDCQVLMLGTTRLVEMAEEKLQGEVVSLNELTQ-----ILAPWLGKVDTI 185
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSG 254
VL CTH+PL+ +Q+ V +D+ +IA R LLP T + + D+ + S
Sbjct: 186 VLGCTHFPLMRAEIQQVCGAGVTIIDSGKAIANRVVSLLPESATQDAALEEMDNLTYCSA 245
Query: 255 KP 256
KP
Sbjct: 246 KP 247
>gi|218701323|ref|YP_002408952.1| glutamate racemase [Escherichia coli IAI39]
gi|226722984|sp|B7NU33|MURI_ECO7I RecName: Full=Glutamate racemase
gi|218371309|emb|CAR19141.1| glutamate racemase [Escherichia coli IAI39]
Length = 285
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|251787784|ref|YP_003002505.1| glutamate racemase [Dickeya zeae Ech1591]
gi|247536405|gb|ACT05026.1| glutamate racemase [Dickeya zeae Ech1591]
Length = 290
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 145/259 (55%), Gaps = 6/259 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ + D ++K
Sbjct: 25 TVLVFDSGVGGLSVYDEVRKLLPDLHYIYAFDNEAFPYGEKPEQFIIERVLSIV-DAVEK 83
Query: 75 YQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
P+ L +IACNTA T+ LR F +G VPA+K AA T++G++ +L+T AT++
Sbjct: 84 QHPLSLVIIACNTASTISLPALRERF-DFPVVGVVPAVKPAAKLTRNGVVGLLATRATVQ 142
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R+YT LI + C I L+ S L E G + E+ ++K + K + D
Sbjct: 143 RSYTHELISRFAHDCQILLLGSAELVEFAEAKLQGESVSEEVLRKILRPWL--KLAEPPD 200
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+PL+ +++ P +D+ +IARR L+ ++ + + A LS
Sbjct: 201 TVVLGCTHFPLLAEELQRVLPDGTRLVDSGSAIARRTAWLIEHLDNPKCSTEKNLAYCLS 260
Query: 254 GKPDI-AMRRLMQGFGLKS 271
P + A+ +++ +G S
Sbjct: 261 ITPKVAALWPVLRRYGFNS 279
>gi|215489308|ref|YP_002331739.1| glutamate racemase [Escherichia coli O127:H6 str. E2348/69]
gi|215267380|emb|CAS11831.1| glutamate racemase MurI [Escherichia coli O127:H6 str. E2348/69]
Length = 285
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|237703008|ref|ZP_04533489.1| glutamate racemase MurI [Escherichia sp. 3_2_53FAA]
gi|115515364|gb|ABJ03439.1| glutamate racemase MurI [Escherichia coli APEC O1]
gi|226902945|gb|EEH89204.1| glutamate racemase MurI [Escherichia sp. 3_2_53FAA]
gi|323954254|gb|EGB50039.1| glutamate racemase [Escherichia coli H263]
Length = 289
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243
>gi|110345903|gb|ABG72140.1| glutamate racemase [Escherichia coli 536]
Length = 289
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 243
>gi|91213519|ref|YP_543505.1| glutamate racemase [Escherichia coli UTI89]
gi|162317562|ref|YP_859563.2| glutamate racemase [Escherichia coli APEC O1]
gi|218561042|ref|YP_002393955.1| glutamate racemase [Escherichia coli S88]
gi|122421619|sp|Q1R3U0|MURI_ECOUT RecName: Full=Glutamate racemase
gi|226722983|sp|B7MIA7|MURI_ECO45 RecName: Full=Glutamate racemase
gi|91075093|gb|ABE09974.1| glutamate racemase [Escherichia coli UTI89]
gi|218367811|emb|CAR05605.1| glutamate racemase [Escherichia coli S88]
gi|294491460|gb|ADE90216.1| glutamate racemase [Escherichia coli IHE3034]
gi|307629048|gb|ADN73352.1| glutamate racemase [Escherichia coli UM146]
gi|323949465|gb|EGB45354.1| glutamate racemase [Escherichia coli H252]
Length = 285
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|218692257|ref|YP_002400469.1| glutamate racemase [Escherichia coli ED1a]
gi|29839540|sp|Q8FB89|MURI_ECOL6 RecName: Full=Glutamate racemase
gi|254766115|sp|B7MR95|MURI_ECO81 RecName: Full=Glutamate racemase
gi|218429821|emb|CAR10783.2| glutamate racemase [Escherichia coli ED1a]
Length = 285
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NIPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|162138273|ref|YP_672041.2| glutamate racemase [Escherichia coli 536]
gi|306813762|ref|ZP_07447938.1| glutamate racemase [Escherichia coli NC101]
gi|331649824|ref|ZP_08350904.1| glutamate racemase [Escherichia coli M605]
gi|281181040|dbj|BAI57370.1| glutamate racemase [Escherichia coli SE15]
gi|305852760|gb|EFM53207.1| glutamate racemase [Escherichia coli NC101]
gi|331041457|gb|EGI13607.1| glutamate racemase [Escherichia coli M605]
Length = 285
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEPP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|87199816|ref|YP_497073.1| glutamate racemase [Novosphingobium aromaticivorans DSM 12444]
gi|87135497|gb|ABD26239.1| glutamate racemase [Novosphingobium aromaticivorans DSM 12444]
Length = 277
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 7/245 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL VL+K+R ++PE IYVAD+ G PYG + + R+ L + ++
Sbjct: 20 LLLFDSGVGGLSVLRKVRAVLPEAPVIYVADNAGLPYGAKTEAQIAARVSGLLGRLTERL 79
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P L IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R+
Sbjct: 80 APRLVCIACNTASTIALASVREVL-EVPIVGTVPAIKPAAALTRTGVIGLLGTEATIRQA 138
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y L + + H+ + L + E G ++ + G R D +
Sbjct: 139 YVDRLEAEFAADKHLLRHGAPELVAAAEAKLRGERVDPAVYARAAAALRAMPGGDRIDTV 198
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALFLS 253
VLACTH+PL+ R+ V ++D SD IARR + + Q R D ALF
Sbjct: 199 VLACTHFPLVEDELREAFGPEVRFVDGSDGIARR----IAHLTQGQAWRRTEPDLALFTR 254
Query: 254 GKPDI 258
G D+
Sbjct: 255 GGEDV 259
>gi|307128966|ref|YP_003880982.1| glutamate racemase [Dickeya dadantii 3937]
gi|306526495|gb|ADM96425.1| glutamate racemase [Dickeya dadantii 3937]
Length = 290
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 148/259 (57%), Gaps = 6/259 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ + D ++K
Sbjct: 25 TVLVFDSGVGGLSVYDEVRKLLPDLHYIYTFDNEAFPYGEKPEQFIIERVVSIV-DAVEK 83
Query: 75 YQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
P+ L +IACNTA T+ LR+ F + +G VPA+K AA T++G++ +L+T AT++
Sbjct: 84 QHPLSLVIIACNTASTISLPALRARF-NFPVVGVVPAVKPAAKLTRNGVVGLLATRATVQ 142
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI + + C I L+ S L E G + E+ ++K ++ K + D
Sbjct: 143 RPYTHELISRFANDCQILLLGSAELVEWGEAKLQGETVPEEVLRKILKPWL--KLPEPPD 200
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+PL+ +Q+ P +D+ +IARR L+ ++ + + A LS
Sbjct: 201 TVVLGCTHFPLLSEELQQVLPDGTRLVDSGTAIARRTAWLIEHLDNPKLSTERNLAYCLS 260
Query: 254 GKPDI-AMRRLMQGFGLKS 271
P + A+ +++ +G +
Sbjct: 261 ITPKVAALSPVLRRYGFSA 279
>gi|237728080|ref|ZP_04558561.1| glutamate racemase [Citrobacter sp. 30_2]
gi|226910337|gb|EEH96255.1| glutamate racemase [Citrobacter sp. 30_2]
Length = 283
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 133/234 (56%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSEEFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T AT++R+YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 128 GVVGLLATRATVKRSYTHELIARFANECQIAMLGSAELVELAEAKLHGETVSLEELRRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWL--RMSEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|114045687|ref|YP_736237.1| glutamate racemase [Shewanella sp. MR-7]
gi|122945064|sp|Q0I0C5|MURI_SHESR RecName: Full=Glutamate racemase
gi|113887129|gb|ABI41180.1| glutamate racemase [Shewanella sp. MR-7]
Length = 272
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 130/234 (55%), Gaps = 13/234 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P +++ Y+ D+ PYG E+ L + L +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHNYCYLFDNARLPYGELEEQELISGCVALIDQV 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK----KEIEGCFIEK 187
++R YT LI + CH+ L S L E+ KI ++ ++ +E
Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQ-----KIATGQLDMARLAQVLSPIVEA 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q
Sbjct: 175 D---LDVLVLGCTHFPMLRDELQQVLGKGVTLLDSGEAIAKRVKTLLAETKSEQ 225
>gi|168262957|ref|ZP_02684930.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|194446431|ref|YP_002043393.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|238912271|ref|ZP_04656108.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|194405094|gb|ACF65316.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|205348286|gb|EDZ34917.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 260
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S L E G + +E+++ + E D +
Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|197248641|ref|YP_002149052.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197212344|gb|ACH49741.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 260
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S L E G + +E+++ + E D +
Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|161617274|ref|YP_001591239.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|197262992|ref|ZP_03163066.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|198241754|ref|YP_002218058.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|200386743|ref|ZP_03213355.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|161366638|gb|ABX70406.1| hypothetical protein SPAB_05116 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197241247|gb|EDY23867.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197936270|gb|ACH73603.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199603841|gb|EDZ02386.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|312915247|dbj|BAJ39221.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321225423|gb|EFX50481.1| Glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
Length = 260
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S L E G + +E+++ + E D +
Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|161505378|ref|YP_001572490.1| glutamate racemase [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|194472599|ref|ZP_03078583.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194738355|ref|YP_002117043.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|213051820|ref|ZP_03344698.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213427064|ref|ZP_03359814.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213646315|ref|ZP_03376368.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|224585944|ref|YP_002639743.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|289830049|ref|ZP_06547498.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|16504616|emb|CAD09499.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29139435|gb|AAO71002.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|160866725|gb|ABX23348.1| hypothetical protein SARI_03532 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|194458963|gb|EDX47802.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194713857|gb|ACF93078.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|224470472|gb|ACN48302.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322613115|gb|EFY10059.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619257|gb|EFY16140.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322626123|gb|EFY22935.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626417|gb|EFY23223.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632469|gb|EFY29217.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635048|gb|EFY31769.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642749|gb|EFY39339.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646426|gb|EFY42937.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322648559|gb|EFY45009.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322654820|gb|EFY51138.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322657287|gb|EFY53567.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662226|gb|EFY58441.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669773|gb|EFY65917.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672032|gb|EFY68147.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675753|gb|EFY71825.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681831|gb|EFY77857.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322683974|gb|EFY79983.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323193245|gb|EFZ78460.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197603|gb|EFZ82736.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323202193|gb|EFZ87248.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323207172|gb|EFZ92124.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323211374|gb|EFZ96215.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323218581|gb|EGA03289.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323220937|gb|EGA05369.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226066|gb|EGA10284.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231593|gb|EGA15705.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236901|gb|EGA20972.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239421|gb|EGA23470.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323243986|gb|EGA27997.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323249349|gb|EGA33266.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323250408|gb|EGA34291.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258862|gb|EGA42514.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323260886|gb|EGA44486.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265226|gb|EGA48723.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270448|gb|EGA53894.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 260
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S L E G + +E+++ + E D +
Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|103486695|ref|YP_616256.1| glutamate racemase [Sphingopyxis alaskensis RB2256]
gi|123253315|sp|Q1GTU9|MURI_SPHAL RecName: Full=Glutamate racemase
gi|98976772|gb|ABF52923.1| glutamate racemase [Sphingopyxis alaskensis RB2256]
Length = 268
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 115/214 (53%), Gaps = 1/214 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL FDSG+GGL VL R L+P +Y AD G PYG + L R+ L ++++Y
Sbjct: 10 ILFFDSGLGGLSVLGPTRALLPTAPIVYAADYAGLPYGRKSNEELAARVPALLGRLVERY 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
QP L+VIACNTA T+ +R+ + +G VPAIK AA T+SG+I +L T AT+R+
Sbjct: 70 QPRLAVIACNTASTIALGHVRAAL-DLPIVGTVPAIKPAAEMTKSGVIGVLGTEATVRQP 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y +L + + S L + E G + + I + + G + G DV+
Sbjct: 129 YVDDLSARFAGGKTVLRHGSPGLVTGAEARLRGETVDPEVIARAVAGLRDQPRGDAIDVV 188
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VLACTH+PL+ + V +D ++ IARR
Sbjct: 189 VLACTHFPLLKDELQAGFGRGVALIDGAEGIARR 222
>gi|311281559|ref|YP_003943790.1| glutamate racemase [Enterobacter cloacae SCF1]
gi|308750754|gb|ADO50506.1| glutamate racemase [Enterobacter cloacae SCF1]
Length = 283
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 132/238 (55%), Gaps = 7/238 (2%)
Query: 1 MKIDNYPCEKKLQN----SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56
++ +N C + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG
Sbjct: 5 LQDENTTCRAAIPSDPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKS 64
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA
Sbjct: 65 ESFIVERVVEIVTAVQARYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T +G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+
Sbjct: 124 LTANGIVGLLATRGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEEL 183
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++ + E D +VL CTH+PL+ + P +D+ +IARR LL
Sbjct: 184 RRILRPWLRMPEPP--DTVVLGCTHFPLLQEELLAVLPEGTRLVDSGAAIARRTAWLL 239
>gi|238897697|ref|YP_002923376.1| glutamate racemase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465454|gb|ACQ67228.1| glutamate racemase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 271
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 5/256 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
S+LI DSGIGGL V Q+M+ L+P H+IY D+ GFPYG + + ++++ + + I K
Sbjct: 12 SVLILDSGIGGLSVYQEMKKLLPHIHYIYCFDNEGFPYGEKSEIFILEQIVRIMTAIQKK 71
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ +IACNTA T++ LR F S +GAVPAIK AA T++G++ +L+TPAT++R
Sbjct: 72 HFLNCVIIACNTASTIVLPILRQRF-SFPIIGAVPAIKPAAHITRNGVLGLLATPATIKR 130
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT +LI + C + L+ S L E+ G +I + KK ++ K D
Sbjct: 131 PYTLDLIKRFAKNCQVELLGSSELVYLAEKKVLGTEISINMFKKILQPWL--NLQKVPDT 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
IVL CTH+P I++ +Q+ + + +IA+RA L+ F + A +
Sbjct: 189 IVLGCTHFPFIINELQQIF-LNARMIHSGAAIAKRAFSLIGSQQNTSVHSFKNKAYCVKK 247
Query: 255 KPDI-AMRRLMQGFGL 269
D ++ +++ +G
Sbjct: 248 NGDTESLSPILEKYGF 263
>gi|157883967|pdb|2JFN|A Chain A, Crystal Structure Of Escherichia Coli Glutamate Racemase
In Complex With L-Glutamate And Activator Udp-Murnac-Ala
Length = 267
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 127/220 (57%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++
Sbjct: 4 TVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQER 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R
Sbjct: 64 YPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKR 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT LI + ++C I ++ S + E G + D +K+ + KE D
Sbjct: 123 SYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 181 VVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 220
>gi|261346833|ref|ZP_05974477.1| glutamate racemase [Providencia rustigianii DSM 4541]
gi|282565012|gb|EFB70547.1| glutamate racemase [Providencia rustigianii DSM 4541]
Length = 287
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL V ++++ ++P H+IY D+ FPYG + + +R+ + + + K
Sbjct: 27 TILVFDSGVGGLSVYREVKKMLPNAHYIYAFDNEAFPYGEKTEEFIIERVYQIVNAVAKK 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ ++VIACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+ R
Sbjct: 87 HPLTIAVIACNTASTVSLPNLRAHF-TFPIVGVVPAIKPATKLTRNGIVGLLATKGTVNR 145
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + + C + L+ S L E G + DE+ + I KE D
Sbjct: 146 EYTKELIERFATDCKVILLGSAELVQLAERKLHGETLPLDEVAQAIRPWIKMKEAP--DT 203
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++L CTH+PLIV ++ P ++D+ +IARR L+
Sbjct: 204 VILGCTHFPLIVEELEKVLPNGTRFIDSGAAIARRTVWLI 243
>gi|238921669|ref|YP_002935184.1| glutamate racemase [Edwardsiella ictaluri 93-146]
gi|238871238|gb|ACR70949.1| glutamate racemase, putative [Edwardsiella ictaluri 93-146]
Length = 260
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 124/219 (56%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG E + +R++ + + + ++
Sbjct: 1 MLVFDSGVGGLSVYQEIRALLPDLHYIYAFDNQGFPYGEKEAVFITERVLRIVASLHQRH 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA T++ LR+ FP +G VPAIK AA T++G++ +L+T AT++R
Sbjct: 61 TLSAMVVACNTASTIVLPALRARFP-FPVVGVVPAIKPAAKLTRNGIVGLLATRATVQRA 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + C I ++ S L E G + ++ + E D +
Sbjct: 120 YTHELIARFATDCQIKMLGSAELVELAEAKLHGEALDLQRLRTILRPWLTMAEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 178 VLGCTHFPLLRDELAQVLPAGTRLVDSGAAIARRVAWLI 216
>gi|194449428|ref|YP_002048128.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194407732|gb|ACF67951.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
Length = 260
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 125/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPNLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S L E G + +E+++ + E D +
Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|213609517|ref|ZP_03369343.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
Length = 233
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S L E G + +E+++ + E D +
Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|269140807|ref|YP_003297508.1| glutamate racemase [Edwardsiella tarda EIB202]
gi|267986468|gb|ACY86297.1| glutamate racemase [Edwardsiella tarda EIB202]
gi|304560567|gb|ADM43231.1| Glutamate racemase [Edwardsiella tarda FL6-60]
Length = 260
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 123/219 (56%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG E + R++ + + + ++
Sbjct: 1 MLVFDSGVGGLSVYQEIRALLPDLHYIYAFDNQGFPYGEKEAAFITDRVLRIVASLHQRH 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA T++ LR+ FP +G VPAIK AA T++G++ +L+T AT++R
Sbjct: 61 TLSAMVVACNTASTIVLPALRARFP-FPVVGVVPAIKPAAKLTRNGVVGLLATRATVQRA 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + C I ++ S L E G + ++ + E D +
Sbjct: 120 YTHELIARFATDCQIKMLGSAELVELAEAKLHGEALDLQRLRTILRPWLTMAEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 178 VLGCTHFPLLRDELAQVLPAGTRLVDSGAAIARRVAWLI 216
>gi|260595994|ref|YP_003208565.1| glutamate racemase [Cronobacter turicensis z3032]
gi|260215171|emb|CBA26986.1| Glutamate racemase [Cronobacter turicensis z3032]
Length = 288
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 140/257 (54%), Gaps = 4/257 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +
Sbjct: 28 TILVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQAR 87
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y L+VIACN+A T+ LR F + +G VPAIK AA T +G++ +L+T T++R
Sbjct: 88 YPLALAVIACNSASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRGTVKR 146
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + ++C I ++ S L E G + + +++ + E D
Sbjct: 147 PYTHELIARFANECQIEMLGSAELVEIAEAKLHGEPVSLEALRRVLRPWLRMPEPP--DT 204
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+PL+ Q+ P +D+ +IARR LL ++ A ++
Sbjct: 205 VVLGCTHFPLLADELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDACSFDENIAYCMAL 264
Query: 255 KPDIA-MRRLMQGFGLK 270
P++A + ++Q +G
Sbjct: 265 TPEVAQLMSVLQRYGFN 281
>gi|325499291|gb|EGC97150.1| glutamate racemase [Escherichia fergusonii ECD227]
Length = 262
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|331005029|ref|ZP_08328434.1| Glutamate racemase [gamma proteobacterium IMCC1989]
gi|330421157|gb|EGG95418.1| Glutamate racemase [gamma proteobacterium IMCC1989]
Length = 273
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 129/247 (52%), Gaps = 9/247 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL +LQ++R P F Y +D+ FPYG + L +R+ + +
Sbjct: 7 ILVFDSGVGGLSILQEIRRQYPHCCFFYASDNAAFPYGTKTEEELIERVDIVLHTLQQTT 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q + V+ACNTA T+ +R F S +G VPAIK AAA +QS +I +L+TP T++R
Sbjct: 67 QADIIVVACNTASTVALPRIRERF-SQPVIGVVPAIKPAAALSQSKVIGVLATPGTVKRK 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + C + + + L E+ G I + +++ ++ D +
Sbjct: 126 YTQQLIAQFAEDCEVISIGTSELVHLAEQKLRGETITQQQLEPIVQRLI---HNSAIDTV 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT----HQTRVFDDHALF 251
VLACTH+PL+ + P W+D+ ++IARR L +N H + D A F
Sbjct: 183 VLACTHFPLLKKELQTALPNIKHWIDSGEAIARRVGYWLDTLNIDLGDHASNT-DSTAYF 241
Query: 252 LSGKPDI 258
+ P+I
Sbjct: 242 TAQSPNI 248
>gi|191169526|ref|ZP_03031256.1| glutamate racemase [Escherichia coli B7A]
gi|193063978|ref|ZP_03045064.1| glutamate racemase [Escherichia coli E22]
gi|193067960|ref|ZP_03048925.1| glutamate racemase [Escherichia coli E110019]
gi|194429405|ref|ZP_03061929.1| glutamate racemase [Escherichia coli B171]
gi|194433275|ref|ZP_03065556.1| glutamate racemase [Shigella dysenteriae 1012]
gi|300902584|ref|ZP_07120560.1| hypothetical protein HMPREF9536_00757 [Escherichia coli MS 84-1]
gi|300926197|ref|ZP_07142003.1| hypothetical protein HMPREF9548_04219 [Escherichia coli MS 182-1]
gi|301324906|ref|ZP_07218467.1| hypothetical protein HMPREF9535_00045 [Escherichia coli MS 78-1]
gi|309797134|ref|ZP_07691531.1| hypothetical protein HMPREF9348_04371 [Escherichia coli MS 145-7]
gi|190900431|gb|EDV60250.1| glutamate racemase [Escherichia coli B7A]
gi|192929443|gb|EDV83051.1| glutamate racemase [Escherichia coli E22]
gi|192958580|gb|EDV89018.1| glutamate racemase [Escherichia coli E110019]
gi|194412552|gb|EDX28850.1| glutamate racemase [Escherichia coli B171]
gi|194418559|gb|EDX34647.1| glutamate racemase [Shigella dysenteriae 1012]
gi|300405344|gb|EFJ88882.1| hypothetical protein HMPREF9536_00757 [Escherichia coli MS 84-1]
gi|300417762|gb|EFK01073.1| hypothetical protein HMPREF9548_04219 [Escherichia coli MS 182-1]
gi|300848190|gb|EFK75950.1| hypothetical protein HMPREF9535_00045 [Escherichia coli MS 78-1]
gi|308119213|gb|EFO56475.1| hypothetical protein HMPREF9348_04371 [Escherichia coli MS 145-7]
gi|320180303|gb|EFW55235.1| Glutamate racemase [Shigella boydii ATCC 9905]
gi|320201538|gb|EFW76116.1| Glutamate racemase [Escherichia coli EC4100B]
gi|323155494|gb|EFZ41673.1| glutamate racemase [Escherichia coli EPECa14]
gi|323161254|gb|EFZ47167.1| glutamate racemase [Escherichia coli E128010]
gi|323177993|gb|EFZ63577.1| glutamate racemase [Escherichia coli 1180]
gi|323182072|gb|EFZ67482.1| glutamate racemase [Escherichia coli 1357]
gi|324019672|gb|EGB88891.1| hypothetical protein HMPREF9542_01635 [Escherichia coli MS 117-3]
gi|332083985|gb|EGI89194.1| glutamate racemase [Shigella boydii 5216-82]
gi|332085315|gb|EGI90489.1| glutamate racemase [Shigella dysenteriae 155-74]
Length = 262
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|327250613|gb|EGE62321.1| glutamate racemase [Escherichia coli STEC_7v]
Length = 262
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|117918638|ref|YP_867830.1| glutamate racemase [Shewanella sp. ANA-3]
gi|166231054|sp|A0KRK5|MURI_SHESA RecName: Full=Glutamate racemase
gi|117610970|gb|ABK46424.1| glutamate racemase [Shewanella sp. ANA-3]
Length = 273
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 134/246 (54%), Gaps = 14/246 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P + + Y+ D+ PYG E+ L + L +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHDYCYLFDNARLPYGELEEQELISGCVALIDQV 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK----KEIEGCFIEK 187
++R YT LI + CH+ L S L E+ KI ++ ++ +E
Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQ-----KIATGQLDMVRLTQVLSPIVEA 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFD 246
+ DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q + D
Sbjct: 175 D---LDVLVLGCTHFPMLRDELQQVLGQGVTLLDSGEAIAKRVKTLLAETKSDEQVQEED 231
Query: 247 DHALFL 252
H+ L
Sbjct: 232 AHSNLL 237
>gi|315298482|gb|EFU57737.1| hypothetical protein HMPREF9545_02463 [Escherichia coli MS 16-3]
Length = 262
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 127/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+S +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSSAAIARRTAWLL 216
>gi|322834972|ref|YP_004214999.1| glutamate racemase [Rahnella sp. Y9602]
gi|321170173|gb|ADW75872.1| glutamate racemase [Rahnella sp. Y9602]
Length = 293
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 129/220 (58%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL V ++R ++P+ H+IY D+V FPYG + + +R++ + + + +
Sbjct: 28 TVLVFDSGVGGLSVYDEVRQMLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVAKR 87
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + VIACNTA T+ LR+ F S +G VPAIK AA T++G++ +L+T AT++R
Sbjct: 88 HPLSIIVIACNTASTVSLPALRAKF-SCPVVGVVPAIKPAAKLTRNGVVGLLATRATVQR 146
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT +L+ + + C I ++ S L E G ++ +KK + +E D
Sbjct: 147 PYTHDLVARFATDCQILMLGSAELVELAEAKLHGEEVSLAALKKILHPWLRLREPP--DT 204
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+PL+ Q+ P +D+ +IARRA L+
Sbjct: 205 VVLGCTHFPLLSQELSQVLPDGTRMIDSGSAIARRAHWLI 244
>gi|113968524|ref|YP_732317.1| glutamate racemase [Shewanella sp. MR-4]
gi|122944227|sp|Q0HNV7|MURI_SHESM RecName: Full=Glutamate racemase
gi|113883208|gb|ABI37260.1| glutamate racemase [Shewanella sp. MR-4]
Length = 272
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 125/230 (54%), Gaps = 5/230 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P + + Y+ D+ PYG E+ L + L +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHDYCYLFDNARLPYGELEEQELVSGCVALIDQV 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L S L E+ ++ + + +
Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQKIATGQLDMARLTQVLSPIVTAD---- 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q
Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGKGVTLLDSGEAIAKRVKTLLAETKSEQ 225
>gi|170022021|ref|YP_001726975.1| glutamate racemase [Escherichia coli ATCC 8739]
gi|194438347|ref|ZP_03070438.1| glutamate racemase [Escherichia coli 101-1]
gi|297521937|ref|ZP_06940323.1| glutamate racemase [Escherichia coli OP50]
gi|300916976|ref|ZP_07133674.1| hypothetical protein HMPREF9540_00832 [Escherichia coli MS 115-1]
gi|300928750|ref|ZP_07144266.1| hypothetical protein HMPREF9550_01102 [Escherichia coli MS 187-1]
gi|300948244|ref|ZP_07162363.1| hypothetical protein HMPREF9541_01786 [Escherichia coli MS 116-1]
gi|300954723|ref|ZP_07167157.1| hypothetical protein HMPREF9547_00648 [Escherichia coli MS 175-1]
gi|301024176|ref|ZP_07187885.1| hypothetical protein HMPREF9551_02242 [Escherichia coli MS 196-1]
gi|301645164|ref|ZP_07245121.1| hypothetical protein HMPREF9543_01787 [Escherichia coli MS 146-1]
gi|312971739|ref|ZP_07785913.1| glutamate racemase [Escherichia coli 1827-70]
gi|169756949|gb|ACA79648.1| glutamate racemase [Escherichia coli ATCC 8739]
gi|194422784|gb|EDX38780.1| glutamate racemase [Escherichia coli 101-1]
gi|299880535|gb|EFI88746.1| hypothetical protein HMPREF9551_02242 [Escherichia coli MS 196-1]
gi|300318304|gb|EFJ68088.1| hypothetical protein HMPREF9547_00648 [Escherichia coli MS 175-1]
gi|300415728|gb|EFJ99038.1| hypothetical protein HMPREF9540_00832 [Escherichia coli MS 115-1]
gi|300452222|gb|EFK15842.1| hypothetical protein HMPREF9541_01786 [Escherichia coli MS 116-1]
gi|300463275|gb|EFK26768.1| hypothetical protein HMPREF9550_01102 [Escherichia coli MS 187-1]
gi|301076543|gb|EFK91349.1| hypothetical protein HMPREF9543_01787 [Escherichia coli MS 146-1]
gi|310334116|gb|EFQ00321.1| glutamate racemase [Escherichia coli 1827-70]
gi|315617764|gb|EFU98369.1| glutamate racemase [Escherichia coli 3431]
Length = 262
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|187776066|ref|ZP_02800193.2| glutamate racemase [Escherichia coli O157:H7 str. EC4196]
gi|188494268|ref|ZP_03001538.1| glutamate racemase [Escherichia coli 53638]
gi|189010240|ref|ZP_02805903.2| glutamate racemase [Escherichia coli O157:H7 str. EC4076]
gi|189402183|ref|ZP_02780670.2| glutamate racemase [Escherichia coli O157:H7 str. EC4401]
gi|189403088|ref|ZP_02793288.2| glutamate racemase [Escherichia coli O157:H7 str. EC4486]
gi|189404032|ref|ZP_02786646.2| glutamate racemase [Escherichia coli O157:H7 str. EC4501]
gi|189404858|ref|ZP_02811842.2| glutamate racemase [Escherichia coli O157:H7 str. EC869]
gi|208807428|ref|ZP_03249765.1| glutamate racemase [Escherichia coli O157:H7 str. EC4206]
gi|208814014|ref|ZP_03255343.1| glutamate racemase [Escherichia coli O157:H7 str. EC4045]
gi|208818359|ref|ZP_03258679.1| glutamate racemase [Escherichia coli O157:H7 str. EC4042]
gi|209400751|ref|YP_002273491.1| glutamate racemase [Escherichia coli O157:H7 str. EC4115]
gi|217325108|ref|ZP_03441192.1| glutamate racemase [Escherichia coli O157:H7 str. TW14588]
gi|309783926|ref|ZP_07678571.1| glutamate racemase [Shigella dysenteriae 1617]
gi|30043002|gb|AAP18724.1| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|56384049|gb|AAN45478.2| glutamate racemase [Shigella flexneri 2a str. 301]
gi|187769174|gb|EDU33018.1| glutamate racemase [Escherichia coli O157:H7 str. EC4196]
gi|188489467|gb|EDU64570.1| glutamate racemase [Escherichia coli 53638]
gi|189001518|gb|EDU70504.1| glutamate racemase [Escherichia coli O157:H7 str. EC4076]
gi|189357222|gb|EDU75641.1| glutamate racemase [Escherichia coli O157:H7 str. EC4401]
gi|189362690|gb|EDU81109.1| glutamate racemase [Escherichia coli O157:H7 str. EC4486]
gi|189367934|gb|EDU86350.1| glutamate racemase [Escherichia coli O157:H7 str. EC4501]
gi|189373225|gb|EDU91641.1| glutamate racemase [Escherichia coli O157:H7 str. EC869]
gi|208727229|gb|EDZ76830.1| glutamate racemase [Escherichia coli O157:H7 str. EC4206]
gi|208735291|gb|EDZ83978.1| glutamate racemase [Escherichia coli O157:H7 str. EC4045]
gi|208738482|gb|EDZ86164.1| glutamate racemase [Escherichia coli O157:H7 str. EC4042]
gi|209162151|gb|ACI39584.1| glutamate racemase [Escherichia coli O157:H7 str. EC4115]
gi|217321329|gb|EEC29753.1| glutamate racemase [Escherichia coli O157:H7 str. TW14588]
gi|308928297|gb|EFP73759.1| glutamate racemase [Shigella dysenteriae 1617]
gi|313648865|gb|EFS13304.1| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|320173014|gb|EFW48236.1| Glutamate racemase [Shigella dysenteriae CDC 74-1112]
gi|320182828|gb|EFW57705.1| Glutamate racemase [Shigella flexneri CDC 796-83]
gi|320190929|gb|EFW65579.1| Glutamate racemase [Escherichia coli O157:H7 str. EC1212]
gi|323167446|gb|EFZ53154.1| glutamate racemase [Shigella sonnei 53G]
gi|326338013|gb|EGD61843.1| Glutamate racemase [Escherichia coli O157:H7 str. 1044]
gi|326342692|gb|EGD66465.1| Glutamate racemase [Escherichia coli O157:H7 str. 1125]
gi|332088274|gb|EGI93394.1| glutamate racemase [Shigella boydii 3594-74]
gi|332751534|gb|EGJ81933.1| glutamate racemase [Shigella flexneri 4343-70]
gi|332751805|gb|EGJ82202.1| glutamate racemase [Shigella flexneri K-671]
gi|332752573|gb|EGJ82959.1| glutamate racemase [Shigella flexneri 2747-71]
gi|332764484|gb|EGJ94716.1| glutamate racemase [Shigella flexneri 2930-71]
gi|332997949|gb|EGK17555.1| glutamate racemase [Shigella flexneri VA-6]
gi|332998392|gb|EGK17990.1| glutamate racemase [Shigella flexneri K-272]
gi|332998878|gb|EGK18472.1| glutamate racemase [Shigella flexneri K-218]
gi|333014084|gb|EGK33441.1| glutamate racemase [Shigella flexneri K-227]
Length = 262
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|50123157|ref|YP_052324.1| glutamate racemase [Pectobacterium atrosepticum SCRI1043]
gi|81643623|sp|Q6CZB6|MURI_ERWCT RecName: Full=Glutamate racemase
gi|49613683|emb|CAG77134.1| glutamate racemase [Pectobacterium atrosepticum SCRI1043]
Length = 285
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 142/272 (52%), Gaps = 4/272 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+ ++ P + +IL+FDSG+GGL V ++R L+P+ H+IY D+ FPYG +
Sbjct: 11 ISLEAIPSNLPSRPTILVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + S + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++
Sbjct: 71 IERVVEIVSAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 130 GVVGLLATRATVQRPYTHELITRFATDCQILSLGSSELVELAEAKLQGEAISISELQKIL 189
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E D +VL CTH+PL+ + + P +D+ +IA+R L+ ++
Sbjct: 190 RPWLRLTEPP--DTVVLGCTHFPLLAEELKMVLPEGTRLVDSGAAIAKRTAWLIANLDNP 247
Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L P +A + ++Q +G S
Sbjct: 248 PLSTDRNLVYCLKITPKVATLWPILQRYGFNS 279
>gi|332345964|gb|AEE59298.1| glutamate racemase MurI [Escherichia coli UMNK88]
Length = 262
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|149186762|ref|ZP_01865073.1| Glutamate racemase [Erythrobacter sp. SD-21]
gi|148829670|gb|EDL48110.1| Glutamate racemase [Erythrobacter sp. SD-21]
Length = 264
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 118/219 (53%), Gaps = 1/219 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL VL ++R LMP+ IY AD G PYG + + R+ L + ++Y
Sbjct: 7 ILLFDSGVGGLTVLAELRQLMPKAPVIYAADMAGLPYGTKTEAEVAARVAGLLGRMAERY 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P L IACNTA T+ +R + +G VPAIK AAA T++G I +L T AT+R+
Sbjct: 67 NPRLICIACNTASTIALGMVREVLET-PIVGTVPAIKPAAALTKTGTIGLLGTQATVRQG 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y +L + S + + L + E G + DE+ K G ++ G+ D +
Sbjct: 126 YVDDLEREFASDKTLLRYGANDLVALGEHKLRGESVSVDEVAKAARGLVLQVGGEDLDTV 185
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VLACTH+PL+ R+ V ++ + IARR LL
Sbjct: 186 VLACTHFPLLEPELREAFGKHVTFVHGAQGIARRIAHLL 224
>gi|283834735|ref|ZP_06354476.1| hypothetical protein CIT292_08958 [Citrobacter youngae ATCC 29220]
gi|291069665|gb|EFE07774.1| hypothetical protein CIT292_08958 [Citrobacter youngae ATCC 29220]
Length = 260
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 128/219 (58%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R+
Sbjct: 61 PLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S L E G + +E+++ + + + D +
Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGETVSLEELRRILRPWL--RMSEPPDTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|183597279|ref|ZP_02958772.1| hypothetical protein PROSTU_00524 [Providencia stuartii ATCC 25827]
gi|188023294|gb|EDU61334.1| hypothetical protein PROSTU_00524 [Providencia stuartii ATCC 25827]
Length = 288
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 128/237 (54%), Gaps = 6/237 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL+FDSG+GGL V ++++ L+P H+IY D+ FPYG + + R+ L I
Sbjct: 24 IRPTILVFDSGVGGLSVYREVKKLLPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQLVDVI 83
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
K+ +++IACNTA T+ LR+ F +G VPAIK A T++G++ +L+T T
Sbjct: 84 AKKHPLTIAIIACNTASTVSLPNLRAHF-RFPVVGVVPAIKPATKLTRNGVVGLLATKGT 142
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + + C + + S L E G +I DEI ++ + +
Sbjct: 143 VNREYTKELIERFATDCKVLSLGSADLVQLAERKLHGEQIPLDEIANAVKPWL--RMPEP 200
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++L CTH+PL++ Q+ P ++D+ +IARRA L IN V D
Sbjct: 201 PDTVILGCTHFPLLIEELEQVLPDGTRFIDSGAAIARRAVWL---INNQAEEVIDSQ 254
>gi|333014021|gb|EGK33381.1| glutamate racemase [Shigella flexneri K-304]
Length = 265
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|317050042|ref|YP_004117690.1| glutamate racemase [Pantoea sp. At-9b]
gi|316951659|gb|ADU71134.1| glutamate racemase [Pantoea sp. At-9b]
Length = 284
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 127/223 (56%), Gaps = 3/223 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ ++L+FDSG+GGL V +++R L+P H++Y D+ GFPYG + + R++ + I
Sbjct: 20 LRPTVLVFDSGVGGLSVYEEIRQLLPNLHYLYAFDNEGFPYGEKTETYIVDRVVSIVEAI 79
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ L VIACN+A T+ LR+ F +G VPAIK AA T++G++ +L+T T
Sbjct: 80 TQHFPLALVVIACNSASTVSLPALRAKF-DFPVVGVVPAIKPAARLTRNGVVGLLATRGT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT L+ + +C I ++ S L E G ++ D++++ ++ KE
Sbjct: 139 VKRPYTHELVAQFARECQIKMLGSAELVELAEAKLHGEEVLLDDVRRVVQPWLRMKEPP- 197
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+PL+ + + P +D+ +IARR LL
Sbjct: 198 -DTVVLGCTHFPLLRDELQLVLPEGTRLVDSGAAIARRTAWLL 239
>gi|114327536|ref|YP_744693.1| glutamate racemase [Granulibacter bethesdensis CGDNIH1]
gi|122327492|sp|Q0BTT2|MURI_GRABC RecName: Full=Glutamate racemase
gi|114315710|gb|ABI61770.1| glutamate racemase [Granulibacter bethesdensis CGDNIH1]
Length = 276
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 119/220 (54%), Gaps = 4/220 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+K IL+FDSGIGGL V +R ++P YVAD GFPYG D AL R++ +
Sbjct: 2 RKTDAHILVFDSGIGGLGVADCIRRMLPAATLGYVADTAGFPYGAMSDEALVTRVLTVLE 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ + +P + VIACNTA TL LRS + F+G VP +K AA+ + + I +L+TP
Sbjct: 62 QAIARLRPDMVVIACNTASTLALSALRSRH-DLPFIGCVPPLKWAASVSATRQIGLLATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R Y + L+ + C +H + LA E G + + ++ E+ I
Sbjct: 121 ATVDRPYLTALMQEHGQGCTLHAHGARHLAGYAEAVFRGETVLVEAVRAELG---ILGMI 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D + L CTHY ++ RQ P PV WLD ++++AR+
Sbjct: 178 PDIDAVALGCTHYGRLLPWLRQAMPRPVAWLDPAEAVARQ 217
>gi|307545641|ref|YP_003898120.1| glutamate racemase [Halomonas elongata DSM 2581]
gi|307217665|emb|CBV42935.1| glutamate racemase [Halomonas elongata DSM 2581]
Length = 258
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 9/257 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSG+GGL V+ +R +PE Y D+ PYG ED L R++ +
Sbjct: 1 MAGPILVFDSGVGGLSVVASLRRRLPEAALAYACDNAMLPYGMREDDWLVGRILEVCESA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ V+ACNTA TL + LR ++ +G VPAIK AA +++ I +L+T AT
Sbjct: 61 VAASGCAGLVVACNTASTLALEALRERL-TVPVVGTVPAIKPAAGMSETRHIGLLATSAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + C + +++ L + E + G + D +++ + +
Sbjct: 120 VGRAYTLRLIREFAGDCRVTRIAADPLVTEAERWVAGERPDLDVLRRTLSPM---AQMPD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PL+ + +P PV W+D+ D+IARRA ++ HQ R +
Sbjct: 177 LDTMVLGCTHFPLLRDWLIEFAPRPVRWVDSGDAIARRAGQVM---ADHQRRRGSETGWV 233
Query: 252 LSGKPDIAMRRLMQGFG 268
+ P A+ R + GFG
Sbjct: 234 TA--PSEALSRGLSGFG 248
>gi|261868128|ref|YP_003256050.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413460|gb|ACX82831.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 275
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 138/259 (53%), Gaps = 7/259 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL FDSG+GG V +++ L+P+YH++Y D+ FPY + + +R + + I
Sbjct: 8 TILFFDSGVGGFSVYHEVKQLLPDYHYLYCFDNAYFPYSEKPEEKIIERTLKICQRIDQM 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y L VIACNTA T++ LR F S+ +G VPAIK AAA T + I +L+T T+ R
Sbjct: 68 YPLDLIVIACNTASTVVLPSLREHF-SIPIVGTVPAIKPAAAQTTTKHIGLLATKGTVNR 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y S+LI Y + C + + S L E G I +EIK E+ + D
Sbjct: 127 KYLSDLIDKYAADCRVEKIGSTKLVELAERKFHGYPIDLNEIKSEVLTWVTMSD---LDC 183
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+PLI +Q P + ++D+ ++A+R LL + +++ ++ +F +
Sbjct: 184 VVLGCTHFPLIKSEIQQCLPQVIYFIDSGAAVAKRVESLLSDVKV-RSKNQTNNQVFCTK 242
Query: 255 --KPDIAMRRLMQGFGLKS 271
P+ + L+Q G ++
Sbjct: 243 MISPEDGLPNLIQSLGFET 261
>gi|301023753|ref|ZP_07187492.1| hypothetical protein HMPREF9534_03554 [Escherichia coli MS 69-1]
gi|300396897|gb|EFJ80435.1| hypothetical protein HMPREF9534_03554 [Escherichia coli MS 69-1]
Length = 262
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIITAVQKRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|170680254|ref|YP_001746359.1| glutamate racemase [Escherichia coli SMS-3-5]
gi|293407588|ref|ZP_06651507.1| glutamate racemase [Escherichia coli FVEC1412]
gi|298383336|ref|ZP_06992929.1| glutamate racemase [Escherichia coli FVEC1302]
gi|300896472|ref|ZP_07114999.1| hypothetical protein HMPREF9552_00793 [Escherichia coli MS 198-1]
gi|170517972|gb|ACB16150.1| glutamate racemase [Escherichia coli SMS-3-5]
gi|291425505|gb|EFE98544.1| glutamate racemase [Escherichia coli FVEC1412]
gi|298276370|gb|EFI17890.1| glutamate racemase [Escherichia coli FVEC1302]
gi|300359665|gb|EFJ75535.1| hypothetical protein HMPREF9552_00793 [Escherichia coli MS 198-1]
Length = 262
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQKRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|170729028|ref|YP_001763054.1| glutamate racemase [Shewanella woodyi ATCC 51908]
gi|229486277|sp|B1KN02|MURI_SHEWM RecName: Full=Glutamate racemase
gi|169814375|gb|ACA88959.1| glutamate racemase [Shewanella woodyi ATCC 51908]
Length = 266
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 139/265 (52%), Gaps = 11/265 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSG+GGL +L ++R ++P+ ++ Y+ D+ PYG E+ L L +
Sbjct: 1 MSGPILVFDSGVGGLSILDEIRRVLPDQNYCYLFDNARLPYGELEEQELIDGCEALITAT 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + L VIACNTA TL+ LR ++ +G VPAIK AA Y+Q+ I +L+TP T
Sbjct: 61 VAQLGASLVVIACNTASTLVLPVLREAL-TIPVVGVVPAIKPAALYSQAKHIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT +LI + + C + L S L E A G +I + EI + + +
Sbjct: 120 IKRSYTHSLIQEFAANCQVELYGSSELVLLAERKASGKQILQGEIAQLLSPIKVSG---- 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--- 248
D +VL CTH+P++ +Q V LD+ ++A R L+ +T R H
Sbjct: 176 IDTLVLGCTHFPILKDEIQQYLGDGVLLLDSGKAVAARVSTLIKEESTLNKRQRKGHSKE 235
Query: 249 --ALFLSGKPDIAMRRLMQGFGLKS 271
AL+ S + +++L+ FG +
Sbjct: 236 MIALYTSEVGE-GLKKLLAEFGFST 259
>gi|261819555|ref|YP_003257661.1| glutamate racemase [Pectobacterium wasabiae WPP163]
gi|261603568|gb|ACX86054.1| glutamate racemase [Pectobacterium wasabiae WPP163]
Length = 285
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 142/272 (52%), Gaps = 4/272 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+ ++ P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG +
Sbjct: 11 ISLEAIPSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + S + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++
Sbjct: 71 IERVVEIVSAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 130 GVVGLLATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQKIL 189
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E D +VL CTH+PL+ + P +D+ +IA+R L+ ++
Sbjct: 190 RPWLRLPEPP--DTVVLGCTHFPLLAEELKMALPEGTRLVDSGAAIAKRTAWLIANLDNP 247
Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 248 PLSTDKNLVYCLTITPKVATLWPILQRYGFDS 279
>gi|254292511|ref|YP_003058534.1| glutamate racemase [Hirschia baltica ATCC 49814]
gi|254041042|gb|ACT57837.1| glutamate racemase [Hirschia baltica ATCC 49814]
Length = 265
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 128/242 (52%), Gaps = 4/242 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N +L+FDSG+GGL ++ +R +P+ Y AD FPYG D L+ RL L +++
Sbjct: 2 NRVLVFDSGVGGLSIVNSIREQIPDTIVDYAADAGFFPYGLKSDEELQARLPKLCKALIE 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K +P + V+ACNTA TL +R + +G VPAIK AA TQ+G I +L+TP T+R
Sbjct: 62 KAKPDIFVMACNTASTLSLASVREIV-DIPVVGTVPAIKPAAEITQTGTIGVLATPGTIR 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R Y +L + + + + L E + G + +D I F EG+ D
Sbjct: 121 RQYLDDLERQFAAHIKVVRHGTAGLVELAERHVRGEILSQDMFDNAISPLFSGAEGQNID 180
Query: 194 VIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
V+VLACTH+PLI ++ P + +D+ D+I R+ LL R ++ D + L
Sbjct: 181 VVVLACTHFPLIRDQIQKACPAYVTKLIDSGDAIGRQVGRLLVR--EKSSKKSPDACVLL 238
Query: 253 SG 254
+G
Sbjct: 239 TG 240
>gi|294634282|ref|ZP_06712824.1| glutamate racemase [Edwardsiella tarda ATCC 23685]
gi|291092322|gb|EFE24883.1| glutamate racemase [Edwardsiella tarda ATCC 23685]
Length = 260
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V Q+++ L+P+ H+IY D+ GFPYG E + +R++ + I ++
Sbjct: 1 MLVFDSGVGGLSVYQEIQALLPDLHYIYAFDNQGFPYGEKEAAFITERVLLIVEAIQRRH 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA T++ LR F S +G VPAIK AA T++G++ +L+T AT++R
Sbjct: 61 TLSAMVVACNTASTIVLPALRERF-SFPVVGVVPAIKPAAKLTRNGIVGLLATRATVQRA 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT L+ + + C I ++ S L E G ++ ++ + E D +
Sbjct: 120 YTHELVARFAADCQIKMLGSAELVEIAEAKLHGEAVELQRLRAILRPWLTMAEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 178 VLGCTHFPLLRAELAQVLPVGTRMVDSGAAIARRVAWLI 216
>gi|300721344|ref|YP_003710615.1| glutamate racemase [Xenorhabdus nematophila ATCC 19061]
gi|297627832|emb|CBJ88367.1| glutamate racemase [Xenorhabdus nematophila ATCC 19061]
Length = 287
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 124/225 (55%), Gaps = 3/225 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + +IL+FDSG+GGL V +++R L+P+ H+IY D+ FPYG + R++ +
Sbjct: 22 KTARPTILVFDSGVGGLSVYKEIRKLLPDLHYIYAFDNEAFPYGEKTADVIIDRVVKVVD 81
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I K+ + VIACNTA T+ LR F S +G VPAIK AA + + ++ +L+T
Sbjct: 82 AIQKKHPLAVVVIACNTASTVSLPVLRERF-SFPVVGVVPAIKPAAKLSCNRIVGLLATR 140
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R YT LI + + C +H + S L E G + DE++K ++ KE
Sbjct: 141 ATVNRGYTKELITRFATDCQVHSIGSAELVELAERKLHGKDVPLDELEKVLKPWLRMKEP 200
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTH+PLI Q+ P +D+ +IARR L+
Sbjct: 201 P--DTVILGCTHFPLIAEELSQVLPDGTRLIDSGAAIARRTAWLI 243
>gi|4511996|gb|AAD21556.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 224
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL F+SG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSRPILFFNSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K + E++ + EG R
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDR 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWP 216
DV+VLACTH+PL+ +SP P
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPAP 204
>gi|323174290|gb|EFZ59916.1| glutamate racemase [Escherichia coli LT-68]
Length = 262
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GG+ V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGVSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|227885282|ref|ZP_04003087.1| glutamate racemase [Escherichia coli 83972]
gi|300975977|ref|ZP_07173249.1| hypothetical protein HMPREF9531_01194 [Escherichia coli MS 45-1]
gi|301048608|ref|ZP_07195621.1| hypothetical protein HMPREF9549_02631 [Escherichia coli MS 185-1]
gi|227837734|gb|EEJ48200.1| glutamate racemase [Escherichia coli 83972]
gi|300299528|gb|EFJ55913.1| hypothetical protein HMPREF9549_02631 [Escherichia coli MS 185-1]
gi|300410167|gb|EFJ93705.1| hypothetical protein HMPREF9531_01194 [Escherichia coli MS 45-1]
gi|307556119|gb|ADN48894.1| glutamate racemase [Escherichia coli ABU 83972]
gi|312948550|gb|ADR29377.1| glutamate racemase [Escherichia coli O83:H1 str. NRG 857C]
gi|315292669|gb|EFU52021.1| hypothetical protein HMPREF9544_02904 [Escherichia coli MS 153-1]
gi|320196758|gb|EFW71380.1| Glutamate racemase [Escherichia coli WV_060327]
gi|323190167|gb|EFZ75445.1| glutamate racemase [Escherichia coli RN587/1]
gi|324006695|gb|EGB75914.1| hypothetical protein HMPREF9532_03634 [Escherichia coli MS 57-2]
gi|330908292|gb|EGH36811.1| glutamate racemase [Escherichia coli AA86]
Length = 262
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|283787352|ref|YP_003367217.1| glutamate racemase [Citrobacter rodentium ICC168]
gi|282950806|emb|CBG90482.1| glutamate racemase [Citrobacter rodentium ICC168]
Length = 283
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 129/234 (55%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNVAFPYGEKSEEFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + + L+VIACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQQRSPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 128 GIVGLLATRGTVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGKPVPLEELQRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + D +VL CTH+PL+ + P +D+ +IARR LL
Sbjct: 188 RPWL--RMSEPPDTVVLGCTHFPLLKEELLHVLPEGTRLVDSGAAIARRTAWLL 239
>gi|191172716|ref|ZP_03034254.1| glutamate racemase [Escherichia coli F11]
gi|300986811|ref|ZP_07177801.1| hypothetical protein HMPREF9553_03017 [Escherichia coli MS 200-1]
gi|190907020|gb|EDV66621.1| glutamate racemase [Escherichia coli F11]
gi|300306388|gb|EFJ60908.1| hypothetical protein HMPREF9553_03017 [Escherichia coli MS 200-1]
gi|315289655|gb|EFU49048.1| hypothetical protein HMPREF9539_00329 [Escherichia coli MS 110-3]
gi|324012464|gb|EGB81683.1| hypothetical protein HMPREF9533_03508 [Escherichia coli MS 60-1]
Length = 262
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|251793125|ref|YP_003007853.1| glutamate racemase [Aggregatibacter aphrophilus NJ8700]
gi|247534520|gb|ACS97766.1| glutamate racemase [Aggregatibacter aphrophilus NJ8700]
Length = 300
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 131/237 (55%), Gaps = 11/237 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L FDSG+GGL V Q+++ L+P+ H++Y D+ FPY + + +R + + I +
Sbjct: 8 TLLFFDSGVGGLSVYQEVQKLLPDCHYLYCFDNAFFPYSEKPEEGIVERTLKICQCIDNM 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y L VIACNTA T++ LR F S+ +G VPAIK AA TQ+ I +L+T T++R
Sbjct: 68 YPLDLIVIACNTASTVVLPVLRKHF-SIPIVGTVPAIKPAAEQTQTKHIGLLATKGTVKR 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRTD 193
Y S+LI Y S C + + S L E G I +EIK E+ E E D
Sbjct: 127 QYLSDLIDKYASFCQVEKIGSTKLVELAEHKLHGYPIDLNEIKVELS----EWENIPDLD 182
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-----NTHQTRVF 245
V+VL CTH+PLI +Q P ++D+ +IA+R + LL + N ++VF
Sbjct: 183 VVVLGCTHFPLIKSEIQQCLPQVKYFIDSGVAIAKRVKSLLKEVKVRLKNQMNSQVF 239
>gi|312965372|ref|ZP_07779605.1| glutamate racemase [Escherichia coli 2362-75]
gi|312290046|gb|EFR17933.1| glutamate racemase [Escherichia coli 2362-75]
Length = 262
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 124/219 (56%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQKRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANACQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|146294088|ref|YP_001184512.1| glutamate racemase [Shewanella putrefaciens CN-32]
gi|145565778|gb|ABP76713.1| glutamate racemase [Shewanella putrefaciens CN-32]
Length = 270
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 1/223 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T
Sbjct: 61 SSLTQPDIIVIACNTASTIALDLLRTEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI ++ ++C + + S +L E+ G D + +EI+ F + +
Sbjct: 120 VNSAYVKMLITNFATECKVLVEDSEVLVLASEQKLLGNGFDPDIVTQEIQRIFSKPDAFN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
TDV+VLACTH+PLI + P V +D+ +IA R LL
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLL 222
>gi|237809706|ref|YP_002894146.1| glutamate racemase [Tolumonas auensis DSM 9187]
gi|237501967|gb|ACQ94560.1| glutamate racemase [Tolumonas auensis DSM 9187]
Length = 274
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 124/224 (55%), Gaps = 4/224 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++ +IL+FDSG+GGL + Q++R +P + + YV D+ FPYG +H + R L
Sbjct: 10 RINVNILLFDSGMGGLSIYQEVRRRLPGHRYDYVFDNAFFPYGEQPEHIITARCCLLIEH 69
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + Q L VIACNTA T++ LR ++ +G VPAIK AAA T++G I +L+TPA
Sbjct: 70 LVSERQIDLVVIACNTASTIVLPALRERL-AIPVVGVVPAIKPAAALTRNGSIGLLATPA 128
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++R YTS LI + + C + + L + E G + E I ++
Sbjct: 129 TVQRPYTSQLIAQFATHCQVLKLGVTELVVQAERKMAGYDVDEQAIHLALQPLL--THAM 186
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+PL+ ++ P + +D+ +IA+R LL
Sbjct: 187 PPDTLVLGCTHFPLLKEEICRIMPG-IQLVDSGAAIAKRVAALL 229
>gi|187732533|ref|YP_001882660.1| glutamate racemase [Shigella boydii CDC 3083-94]
gi|187429525|gb|ACD08799.1| glutamate racemase [Shigella boydii CDC 3083-94]
Length = 262
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T + ++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANSIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G + D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|293391663|ref|ZP_06635997.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952197|gb|EFE02316.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 275
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 141/261 (54%), Gaps = 7/261 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+++IL FDSG+GGL V ++++ L+P +H++Y D+ FPY + + +R + + I
Sbjct: 6 KSTILFFDSGVGGLSVYREVKQLLPNHHYLYCFDNAYFPYSEKPEEKIIERTLKICQRID 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y L VIACNTA T++ LR F S+ +G VPAIK AA + + I +L+T T+
Sbjct: 66 QMYPLDLIVIACNTASTVVLPSLREHF-SIPIVGTVPAIKPAAEQSMTKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R Y S+LI Y + C + + S L E G I +EIK E+ +
Sbjct: 125 KRKYLSDLIDKYAADCRVEKIGSTKLVELAERKLHGYPIDLNEIKSEVLTWVTMSD---L 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PLI +Q P + ++D+ ++A+R LL + +++ ++ +F
Sbjct: 182 DCVVLGCTHFPLIKSEIQQCLPQVIYFIDSGAAVAKRVESLLSDVKV-RSKNQTNNQVFC 240
Query: 253 SG--KPDIAMRRLMQGFGLKS 271
+ P+ + L+Q G ++
Sbjct: 241 TKMISPEDGLPNLIQSLGFET 261
>gi|26250744|ref|NP_756784.1| glutamate racemase [Escherichia coli CFT073]
gi|26111175|gb|AAN83358.1|AE016770_158 Glutamate racemase [Escherichia coli CFT073]
Length = 285
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 126/220 (57%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+G L V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++
Sbjct: 23 TVLVFDSGVGXLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQER 82
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R
Sbjct: 83 YPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKR 141
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT LI + ++C I ++ S + E G + D +K+ + KE D
Sbjct: 142 SYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DT 199
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 200 VVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 239
>gi|117620688|ref|YP_854602.1| glutamate racemase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562095|gb|ABK39043.1| glutamate racemase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 264
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 141/260 (54%), Gaps = 7/260 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL + +++R +P +++ Y D+ FPYG + AL + L S ++ +
Sbjct: 3 NILVFDSGMGGLTIYREIRRALPAHNYFYCFDNANFPYGELSEAALTEVCTRLVSHMVVE 62
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ L VIACNTA T+ LR+ ++ +G VPAIK AAA T++G I +L+TP T+ R
Sbjct: 63 HDIDLVVIACNTASTIALPSLRAAM-TVPVVGVVPAIKPAAALTRNGCIGLLATPGTVSR 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + + L + L E G+ + + +E+ ++E E + D
Sbjct: 122 EYTHELIAQFAPGKRVLLKGATELVVEAEHKLAGLPVNM-ALLREVLADWLEGE-EHPDT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+PL+ RQL P +D+ ++A+R LL + T TR+ D
Sbjct: 180 LVLGCTHFPLLDEEIRQLMP-ACQLVDSGSAVAKRVAHLLAGLVTTPTRLEDVGGKAYCT 238
Query: 255 KPDIAMRRL---MQGFGLKS 271
+ D ++L +Q +GL S
Sbjct: 239 RLDAQTQKLTAPLQAWGLSS 258
>gi|227329569|ref|ZP_03833593.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 285
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 4/266 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + +IL+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++
Sbjct: 17 PSNLPSRPTILVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L
Sbjct: 77 IVNAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAESKLQGETISISELQKILRPWLRL 195
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
E D +VL CTH+PL+ + P +D+ +IA+R L+ ++
Sbjct: 196 PEPP--DTVVLGCTHFPLLAEELKMALPDGTRLVDSGAAIAKRTAWLIANLDNPPLSTDK 253
Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 254 NLVYCLAITPKVATLWPILQRYGFDS 279
>gi|150261128|ref|ZP_01917856.1| putative glutamate racemase [Yersinia pestis CA88-4125]
gi|153947950|ref|YP_001399143.1| glutamate racemase [Yersinia pseudotuberculosis IP 31758]
gi|161484906|ref|NP_667666.2| glutamate racemase [Yersinia pestis KIM 10]
gi|161511329|ref|NP_994432.2| glutamate racemase [Yersinia pestis biovar Microtus str. 91001]
gi|162100189|ref|YP_650027.2| glutamate racemase [Yersinia pestis Antiqua]
gi|162139457|ref|YP_645991.2| glutamate racemase [Yersinia pestis Nepal516]
gi|162202299|ref|YP_001164844.2| glutamate racemase [Yersinia pestis Pestoides F]
gi|218930909|ref|YP_002348784.1| glutamate racemase [Yersinia pestis CO92]
gi|229839605|ref|ZP_04459764.1| glutamate racemase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841690|ref|ZP_04461846.1| glutamate racemase [Yersinia pestis biovar Orientalis str. India
195]
gi|229896694|ref|ZP_04511859.1| glutamate racemase [Yersinia pestis Pestoides A]
gi|229904756|ref|ZP_04519867.1| glutamate racemase [Yersinia pestis Nepal516]
gi|20177979|sp|Q8ZAA2|MURI_YERPE RecName: Full=Glutamate racemase
gi|167017322|sp|A7FD15|MURI_YERP3 RecName: Full=Glutamate racemase
gi|115349520|emb|CAL22494.1| putative glutamate racemase [Yersinia pestis CO92]
gi|149290536|gb|EDM40613.1| putative glutamate racemase [Yersinia pestis CA88-4125]
gi|152959445|gb|ABS46906.1| glutamate racemase [Yersinia pseudotuberculosis IP 31758]
gi|229678874|gb|EEO74979.1| glutamate racemase [Yersinia pestis Nepal516]
gi|229691029|gb|EEO83082.1| glutamate racemase [Yersinia pestis biovar Orientalis str. India
195]
gi|229695971|gb|EEO86018.1| glutamate racemase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700301|gb|EEO88335.1| glutamate racemase [Yersinia pestis Pestoides A]
gi|320013493|gb|ADV97064.1| glutamate racemase [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 287
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + + + +
Sbjct: 27 TALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQR 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+
Sbjct: 87 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 145
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT +LI + + C I L+ S L E G + + +KK + +E D
Sbjct: 146 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 203
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
IVL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 204 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 243
>gi|315633799|ref|ZP_07889089.1| glutamate racemase [Aggregatibacter segnis ATCC 33393]
gi|315477841|gb|EFU68583.1| glutamate racemase [Aggregatibacter segnis ATCC 33393]
Length = 278
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 133/238 (55%), Gaps = 13/238 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL FDSG+GGL V Q+++ L+P+YH++Y D+ FPY + + +R + + I +K
Sbjct: 8 TILFFDSGVGGLSVYQEVKQLLPDYHYLYCFDNAYFPYSEKPEEGIVERTLKICQRI-EK 66
Query: 75 YQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
P+ L VIACNTA T++ LR F S+ +G VPAIK AA T++ I +L+T T++
Sbjct: 67 LCPLDLIVIACNTASTVVLPVLRKHF-SIPIVGTVPAIKPAAEQTKTKHIGLLATKGTVK 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRT 192
R Y S+LI Y S C + + S L E G I +EIK E+ E E
Sbjct: 126 RQYLSDLIDKYASFCQVEKIGSTKLVELAEHKLHGYPIDLNEIKAELS----EWENIPDL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-----NTHQTRVF 245
D +VL CTH+PL+ +Q P ++D+ +IA+R + LL + N ++VF
Sbjct: 182 DAVVLGCTHFPLLKSEIQQCLPQVKYFIDSGAAIAKRVKSLLKDVKVRSKNQMNSQVF 239
>gi|317494788|ref|ZP_07953200.1| glutamate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917390|gb|EFV38737.1| glutamate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 286
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 126/220 (57%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG ++ + +R++ +++ +
Sbjct: 27 TALVFDSGVGGLSVYQEIRSLLPDLHYIYAFDNQGFPYGEKDEAFIIERVVKTVAEVQKR 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + +IACNTA T+ LR F S +G VPAIK AA T++G++ +L+T AT++R
Sbjct: 87 HPLSIVIIACNTASTITLPALRERF-SFPIVGVVPAIKPAAKLTRNGVVGLLATKATVQR 145
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT +LI + + C I ++ S L E G I +KK + E D
Sbjct: 146 SYTHDLIARFATDCDIKMLGSSELVVLAEAKLHGEVIDHAVLKKILRPWLSMAEPP--DT 203
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+PL+ + P +D+ +IARR L+
Sbjct: 204 VVLGCTHFPLLREELAAVLPDGTRLVDSGAAIARRVAWLI 243
>gi|260774782|ref|ZP_05883684.1| glutamate racemase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609207|gb|EEX35362.1| glutamate racemase [Vibrio coralliilyticus ATCC BAA-450]
Length = 263
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 135/259 (52%), Gaps = 11/259 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
LQ+ +LIFDSG+GGL V Q++ +P+ ++Y+ D+ +PYG + L R+ L S
Sbjct: 3 LQSKVLIFDSGVGGLSVFQEIEKKLPQLDYVYLFDNAAYPYGELDHETLVSRVEALVSQY 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ +Q L VIACNTA T++ LR T S+ +G VPAIK A+ + +++TPAT
Sbjct: 63 VADHQVDLVVIACNTASTIVLPSLR-TLLSIPVVGVVPAIKPASNLANKA-VGLIATPAT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + + L+ S L EE G + E+K + +
Sbjct: 121 VTRQYTQELIRDFSQSKPVELLGSTRLVDMAEEKLRGTPVSNQELKAVLSPMI-----GK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV VL CTH+PLI + + V +D+ ++IARR + LL + + + + +F
Sbjct: 176 VDVAVLGCTHFPLIKEEIQSVLSEQVVLVDSGEAIARRVQELLNLEDKKEGKGLRE--IF 233
Query: 252 LSGKP--DIAMRRLMQGFG 268
+ P + A+ R +Q G
Sbjct: 234 STAPPYAEGALNRALQNLG 252
>gi|108773872|gb|ABG16391.1| glutamate racemase [Yersinia pestis Nepal516]
gi|108778024|gb|ABG12082.1| glutamate racemase [Yersinia pestis Antiqua]
gi|145212464|gb|ABP41871.1| glutamate racemase [Yersinia pestis Pestoides F]
Length = 291
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + + + +
Sbjct: 31 TALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQR 90
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+
Sbjct: 91 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 149
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT +LI + + C I L+ S L E G + + +KK + +E D
Sbjct: 150 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 207
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
IVL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 208 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 247
>gi|222035687|emb|CAP78432.1| glutamate racemase [Escherichia coli LF82]
Length = 260
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 124/217 (57%), Gaps = 3/217 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYPL 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+YT
Sbjct: 61 ALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYT 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + ++C I ++ S + E G + D +K+ + KE D +VL
Sbjct: 120 HELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVVL 177
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 GCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 214
>gi|21957008|gb|AAM83917.1|AE013632_5 glutamate racemase [Yersinia pestis KIM 10]
gi|45437760|gb|AAS63309.1| putative glutamate racemase [Yersinia pestis biovar Microtus str.
91001]
Length = 299
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + + + +
Sbjct: 39 TALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQR 98
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+
Sbjct: 99 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 157
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT +LI + + C I L+ S L E G + + +KK + +E D
Sbjct: 158 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 215
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
IVL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 216 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 255
>gi|120597779|ref|YP_962353.1| glutamate racemase [Shewanella sp. W3-18-1]
gi|120557872|gb|ABM23799.1| glutamate racemase [Shewanella sp. W3-18-1]
Length = 270
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 3/231 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T
Sbjct: 61 SSLTQPDIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI ++ ++C + + S L E+ G D + +EI+ F + +
Sbjct: 120 VNSAYVKMLITNFATECKVLVEDSEALVLASEQKLLGNGFDPDIVTQEIQRIFSKPDAFN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
TDV+VLACTH+PLI + P V +D+ +IA R LL +I HQT
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLL-KIE-HQT 228
>gi|146313651|ref|YP_001178725.1| glutamate racemase [Enterobacter sp. 638]
gi|145320527|gb|ABP62674.1| glutamate racemase [Enterobacter sp. 638]
Length = 283
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 134/234 (57%), Gaps = 7/234 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEDFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+VIACNTA T+ LR FP +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQARYPLALAVIACNTASTVSLPSLREKFP-FPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ I
Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECKIAMLGSAELVEMAEAKLHGEPVSLEELRR-I 186
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
G ++ + + D +VL CTH+PL+ ++ P +D+ +IARR LL
Sbjct: 187 LGPWL-RMAEPPDTVVLGCTHFPLLQEELLEVLPEGTRLVDSGAAIARRTAWLL 239
>gi|170026279|ref|YP_001722784.1| glutamate racemase [Yersinia pseudotuberculosis YPIII]
gi|229486286|sp|B1JQ44|MURI_YERPY RecName: Full=Glutamate racemase
gi|169752813|gb|ACA70331.1| glutamate racemase [Yersinia pseudotuberculosis YPIII]
Length = 287
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 123/220 (55%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ + + + +
Sbjct: 27 TALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQR 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+
Sbjct: 87 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 145
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT +LI + + C I L+ S L E G + + +KK + +E D
Sbjct: 146 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 203
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
IVL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 204 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 243
>gi|156972605|ref|YP_001443512.1| glutamate racemase [Vibrio harveyi ATCC BAA-1116]
gi|166231065|sp|A7MXD3|MURI_VIBHB RecName: Full=Glutamate racemase
gi|156524199|gb|ABU69285.1| hypothetical protein VIBHAR_00256 [Vibrio harveyi ATCC BAA-1116]
Length = 268
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 131/245 (53%), Gaps = 9/245 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P ++Y+ D+ +PYG + L R+ L + ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPHMDYLYLFDNEAYPYGELDQDVLITRVNKLVAALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR+ S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 EEHQADIVVIACNTASTIVLPSLRANL-SIPVVGVVPAIKPASLLASQG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKR 191
R YT LI + + L+ S L EE K++ + I E+E + K
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEE-----KLRGESISLSELESILLPLRNK- 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV VL CTH+PLI Q V +D+ ++IARR + LL ++R ++
Sbjct: 178 VDVAVLGCTHFPLIKEEIHQALGGEVTLVDSGEAIARRVKALLLNAMKQESREEGSKKIY 237
Query: 252 LSGKP 256
S P
Sbjct: 238 ASAPP 242
>gi|157147233|ref|YP_001454552.1| glutamate racemase [Citrobacter koseri ATCC BAA-895]
gi|157084438|gb|ABV14116.1| hypothetical protein CKO_03024 [Citrobacter koseri ATCC BAA-895]
Length = 260
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPNLHYIYAFDNVAFPYGEKSEAFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R
Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S L E G + +E+++ + + + D +
Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAEAKLHGEPVSLEELRRILRPWL--RMPEPPDTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 216
>gi|253686599|ref|YP_003015789.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|259509917|sp|C6DHQ3|MURI_PECCP RecName: Full=Glutamate racemase
gi|251753177|gb|ACT11253.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 285
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 4/266 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++
Sbjct: 17 PSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L
Sbjct: 77 IVNAVQLRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQKILRPWLRL 195
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
E D +VL CTH+PL+ + P +D+ +IARR L+ ++
Sbjct: 196 PEPP--DTVVLGCTHFPLLAEELKAALPDGTRLVDSGAAIARRTAWLIANLDNPPLSTDK 253
Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 254 NLVYCLAITPKVATLWPILQRYGFDS 279
>gi|319427429|gb|ADV55503.1| glutamate racemase [Shewanella putrefaciens 200]
Length = 270
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 3/231 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILEVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T
Sbjct: 61 NSLTQPDIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI ++ ++C + + S +L E+ G + + +E++ F + +
Sbjct: 120 VNSAYVKMLITNFATECKVLIEDSEVLVLASEQKLLGNGFDPNIVTQEVQRIFSKPDAFN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
TDV+VLACTH+PLI + P V +D+ +IA R LL +I HQT
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLL-KIE-HQT 228
>gi|186893477|ref|YP_001870589.1| glutamate racemase [Yersinia pseudotuberculosis PB1/+]
gi|229486285|sp|B2JZF9|MURI_YERPB RecName: Full=Glutamate racemase
gi|186696503|gb|ACC87132.1| glutamate racemase [Yersinia pseudotuberculosis PB1/+]
Length = 287
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ + + +
Sbjct: 27 TALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQS 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+
Sbjct: 87 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 145
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT +LI + + C I L+ S L E G + + +KK + +E D
Sbjct: 146 SYTLDLIARFATDCKIELLGSSELVEAAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 203
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
IVL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 204 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 243
>gi|332288965|ref|YP_004419817.1| glutamate racemase [Gallibacterium anatis UMN179]
gi|330431861|gb|AEC16920.1| glutamate racemase [Gallibacterium anatis UMN179]
Length = 262
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 125/242 (51%), Gaps = 8/242 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL FDSG+GGL V ++++ L+P YH++Y D+ FPY L++R + + I
Sbjct: 6 TILFFDSGVGGLSVYREVKALLPNYHYLYCLDNACFPYSEKPGKLLEQRCVEICQKIATN 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Q L VIACNTA T++ +R+ F + +G VPAIK AA TQ+ +I +L+T T+ R
Sbjct: 66 QQIDLIVIACNTASTIVLPAMRAAF-NCPIVGTVPAIKPAAEKTQTKVIGLLATKGTITR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +LI Y C + + S L E+ G KI I + + E E D
Sbjct: 125 PYVDDLIQQYAKNCEVKRLGSTELVEIAEQKLHGKKIDHLAIMRAVAEWRYEYE---MDT 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+PL+ + P ++D+ +IARR + LL QT +D +
Sbjct: 182 VVLGCTHFPLLKSELKACLPQVSFFIDSGKAIARRVQSLL----LSQTTTSNDKQIAYCT 237
Query: 255 KP 256
P
Sbjct: 238 AP 239
>gi|260913044|ref|ZP_05919526.1| glutamate racemase [Pasteurella dagmatis ATCC 43325]
gi|260632631|gb|EEX50800.1| glutamate racemase [Pasteurella dagmatis ATCC 43325]
Length = 269
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 144/260 (55%), Gaps = 7/260 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +IL FDSG+GG V ++ + L+P H++Y D+ FPY + + +R++ + DI
Sbjct: 6 QPTILFFDSGMGGFSVYKETKQLLPNCHYLYCFDNAFFPYSEKTEKKIIERVLMICQDIN 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
KY L VIACNTA T++ LR+ F S+ +G VPAIK AA ++++ I +L+T T+
Sbjct: 66 SKYPLDLIVIACNTASTVVLPSLRAHF-SIPIVGTVPAIKPAAEHSETKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+Y +NLI Y C + + S L E+ G + +K+E++ + +
Sbjct: 125 KRSYVANLISQYAGDCIVEKIGSTKLVEIAEQKLHGKAVDLVALKEELK---LWENIVDL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV+VL CTH+PLI P ++D+ +IA R + LL +I +++ + + +F
Sbjct: 182 DVVVLGCTHFPLIKEEIEWCLPQVRLFIDSGKAIALRVKHLLSKIEV-RSKKMEKNLIFC 240
Query: 253 SGKPD--IAMRRLMQGFGLK 270
+ D + +R++ +G +
Sbjct: 241 TQSFDDEVDFQRVLNFWGFE 260
>gi|212712479|ref|ZP_03320607.1| hypothetical protein PROVALCAL_03574 [Providencia alcalifaciens DSM
30120]
gi|212684695|gb|EEB44223.1| hypothetical protein PROVALCAL_03574 [Providencia alcalifaciens DSM
30120]
Length = 258
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 136/259 (52%), Gaps = 12/259 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V ++++ L+P H+IY D+ FPYG + + R+ + + I K+
Sbjct: 1 MFDSGVGGLSVYREVKKLIPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQIVNAIAKKHPL 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++VIACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+ R YT
Sbjct: 61 TIAVIACNTASTVSLPNLRAHF-TFPIVGVVPAIKPATKLTRNGVVGLLATKGTVNREYT 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + + C + + S L E G + DEI + ++ KE D ++L
Sbjct: 120 KELIERFATDCKVISLGSAELVQLAERKLHGEMLPLDEIAQAVKPWLKMKEAP--DTVIL 177
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-----LFL 252
CTH+PLIV ++ P ++D+ +IARR L+ +Q V D + L
Sbjct: 178 GCTHFPLIVEELEKVLPNGTRFIDSGAAIARRTVWLI----NNQAEVTDSNEEDFAYCLL 233
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+ +R +++ G KS
Sbjct: 234 MNESLQELRPVLEAEGFKS 252
>gi|51594484|ref|YP_068675.1| glutamate racemase [Yersinia pseudotuberculosis IP 32953]
gi|81640781|sp|Q66G56|MURI_YERPS RecName: Full=Glutamate racemase
gi|51587766|emb|CAH19366.1| putative glutamate racemase [Yersinia pseudotuberculosis IP 32953]
Length = 287
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ + + +
Sbjct: 27 TALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQS 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+
Sbjct: 87 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 145
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT +LI + + C I L+ S L E G + + +KK + +E D
Sbjct: 146 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DT 203
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
IVL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 204 IVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLI 243
>gi|94497599|ref|ZP_01304168.1| Glutamate racemase [Sphingomonas sp. SKA58]
gi|94423016|gb|EAT08048.1| Glutamate racemase [Sphingomonas sp. SKA58]
Length = 279
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 115/214 (53%), Gaps = 1/214 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL FDSG+GGL +L +R ++P +Y AD GFPYG + + R+ L ++++Y
Sbjct: 21 ILFFDSGVGGLSILAPVRDMLPTASIVYAADSAGFPYGTKSEAEIAARVPALLGRLVERY 80
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L+VIACNTA T+ +R+ + +G VPAIK AA +++ + +L T AT+R+
Sbjct: 81 RPRLAVIACNTASTIALQHVRAAL-DIPVVGTVPAIKPAALLSKNRIFGVLGTDATVRQP 139
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y L + + C + S L E G + + + G + G+R D++
Sbjct: 140 YVDRLAAEHGADCIVLRHGSAALVQLAEAKLRGEPLDPRVARAALAGLTTQPGGQRMDMV 199
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VLACTH+PL+ +P + ++ D IARR
Sbjct: 200 VLACTHFPLVEAELAAAAPHSLGFVHGGDGIARR 233
>gi|242241176|ref|YP_002989357.1| glutamate racemase [Dickeya dadantii Ech703]
gi|242133233|gb|ACS87535.1| glutamate racemase [Dickeya dadantii Ech703]
Length = 295
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 130/221 (58%), Gaps = 5/221 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
S+LIFDSG+GGL V +++R L+P+ H+IY D+ FPYG + + +R++ + D ++K
Sbjct: 25 SVLIFDSGVGGLSVYEEIRKLLPDLHYIYTFDNEAFPYGEKPEQFIIERVVSIV-DAVEK 83
Query: 75 YQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
P+ + VIACNTA T+ LR+ F + +G VPAIK AA T++G++ +L+T AT++
Sbjct: 84 QHPLSAVVIACNTASTISLPALRARF-NFPVVGVVPAIKPAAKLTRNGVVGLLATRATVQ 142
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI + C I + S L E G ++ D ++K ++ K + D
Sbjct: 143 RPYTHELISRFAHDCTILSLGSSELVEWGEAKLQGDEVPIDALRKILKPWL--KLPEPPD 200
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+PL+ + +Q P +D+ +IARR L+
Sbjct: 201 TVVLGCTHFPLLANELQQALPEGTRLVDSGAAIARRTAWLV 241
>gi|152978530|ref|YP_001344159.1| glutamate racemase [Actinobacillus succinogenes 130Z]
gi|150840253|gb|ABR74224.1| glutamate racemase [Actinobacillus succinogenes 130Z]
Length = 264
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 127/223 (56%), Gaps = 4/223 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL FDSG+GG V +++ L+P+ H++Y D+ FPY + L +R+ + + I
Sbjct: 1 MKPTILFFDSGVGGFSVYSEVKSLLPDCHYLYCFDNAFFPYSERSEETLIERVSKICTTI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+Y L VIACNTA T++ LR TF S+ +G VPAIK AA+ + + I +L+T T
Sbjct: 61 DIRYPLDLIVIACNTASTVVLPSLRRTF-SIPIVGTVPAIKPAASVSHTKHIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R Y + LI Y + C + + S +L E+ G + +++KE++ K+
Sbjct: 120 VKREYVNTLIARYATDCRVERLGSTVLPEIAEQKIKGNSVDLLQLRKELQAWICLKD--- 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTH+PLI R P +LD+ +IA+R + LL
Sbjct: 177 LDTVILGCTHFPLIKEEIRICLPQVKFFLDSGYAIAKRVKSLL 219
>gi|260771658|ref|ZP_05880578.1| glutamate racemase [Vibrio metschnikovii CIP 69.14]
gi|260613435|gb|EEX38634.1| glutamate racemase [Vibrio metschnikovii CIP 69.14]
Length = 269
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 136/251 (54%), Gaps = 15/251 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+++L + +LIFDSG+GGL V Q++ L+P+ + Y+ D+ +PYG L R+ L
Sbjct: 2 QQQLSHKVLIFDSGVGGLSVYQEIVSLLPQLDYTYLFDNAAYPYGELAQEVLLNRVERLI 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
++ + L VIACNTA T++ LR+ S+ +G VPAIK A+ I +++T
Sbjct: 62 ISLVKQQSFDLVVIACNTASTIVLPMLRAKL-SIPVVGVVPAIKPASLVAHKA-IGLIAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PAT+ R YT +LI ++ S+ + L+ S L EE K++ E+ KE +
Sbjct: 120 PATITRQYTHDLIRNFSSKKSVELLGSTRLVDMAEE-----KLRGQEVDKEELATILSPL 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245
+R DV VL CTH+PLI +Q+ V +D+ +IARR + LL P + HQ
Sbjct: 175 IQRIDVAVLGCTHFPLIKAEIQQVLGDDVMLIDSGQAIARRVQQLLDVEPGLK-HQ---- 229
Query: 246 DDHALFLSGKP 256
H +F S P
Sbjct: 230 HPHTIFASAPP 240
>gi|227113199|ref|ZP_03826855.1| glutamate racemase [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 285
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 139/266 (52%), Gaps = 4/266 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++
Sbjct: 17 PSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L
Sbjct: 77 IVNAVQLRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT++R YT LI + + C I + S L E G I E+++ +
Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQRILRPWLRL 195
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
E D +VL CTH+PL+ + P +D+ +IA+R L+ ++
Sbjct: 196 PEPP--DTVVLGCTHFPLLAEELKMALPDGTRLVDSGSAIAKRTAWLIANLDNPPLSTDK 253
Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 254 NLVYCLTITPKVATLWPILQRYGFDS 279
>gi|170769670|ref|ZP_02904123.1| glutamate racemase [Escherichia albertii TW07627]
gi|170121478|gb|EDS90409.1| glutamate racemase [Escherichia albertii TW07627]
Length = 262
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 141/257 (54%), Gaps = 4/257 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V +++R L+P+ H+IY D+V FPYG + + +R++ + + + + Y
Sbjct: 1 MLVFDSGVGGLSVYEEIRRLLPDLHYIYAFDNVAFPYGEKSEEFVVERVVEIVTAVQEHY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S + E G I D +K+ + KE D +
Sbjct: 120 YTHELIARFANECQIEMLGSAEMVELAEAKLHGEDISLDALKRILRPWLRMKEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PL+ Q+ P +D+ +IARR LL + A ++
Sbjct: 178 VLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPEAKSADANIAFCMAMT 237
Query: 256 PDIA-MRRLMQGFGLKS 271
P+ + ++Q +G K+
Sbjct: 238 PEAEQLLPVLQRYGFKT 254
>gi|307246771|ref|ZP_07528839.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|307255755|ref|ZP_07537558.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307260207|ref|ZP_07541916.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|306852346|gb|EFM84583.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|306861315|gb|EFM93306.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306865752|gb|EFM97631.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
Length = 267
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 8/262 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAIKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K + E +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVA----EWQTHP 175
Query: 192 T-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
T D ++L CTH+PL+ +QL P ++D + IA R LL + + ++
Sbjct: 176 TLDTVILGCTHFPLVKQELQQLLPKVKFFIDPGNGIANRVATLLSEFSLENSAQNKENIA 235
Query: 251 FLSGKPDIAMRR--LMQGFGLK 270
F + + +R +MQ +G K
Sbjct: 236 FCTKMDEEFSKREIIMQQWGFK 257
>gi|262392932|ref|YP_003284786.1| glutamate racemase [Vibrio sp. Ex25]
gi|262336526|gb|ACY50321.1| glutamate racemase [Vibrio sp. Ex25]
Length = 267
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLISRVNQLVSSLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+ K + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGNSVSLDELTK-----ILLPLRDKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV VL CTH+PLI Q V +D+ +IARR + LL
Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGEDVTLIDSGAAIARRVKALL 220
>gi|83647752|ref|YP_436187.1| glutamate racemase [Hahella chejuensis KCTC 2396]
gi|83635795|gb|ABC31762.1| glutamate racemase [Hahella chejuensis KCTC 2396]
Length = 271
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 130/256 (50%), Gaps = 7/256 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LI DSG GGL + +R P +Y+AD +PYG+ + ++ R+ + + + Y
Sbjct: 16 LIIDSGSGGLSIWGHIRRHTPWLPTLYLADFGFYPYGDKSEQEIETRVRHIVEQVCECYP 75
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L V+ACNTA T++ D LR+ F +G VPAIK AA +T+ +I +L+T T+RR Y
Sbjct: 76 AQLIVVACNTASTVVLDHLRARF-QQPVVGVVPAIKTAATHTKKQVIGLLATQGTVRRAY 134
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + C + V + L E++ G ++ I+ F+E E D +V
Sbjct: 135 TDELIRDFARHCQVIKVGAPDLVQWGEDWVRGRSPDMARLRGVIQ-PFLEAE---ADQVV 190
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG-K 255
L CTH+PL+ QL+P ++W+D+ ++IARR LL + H F SG K
Sbjct: 191 LGCTHFPLLKPFLYQLAP-DINWVDSGEAIARRVAYLLQAQQSEGGEESTSHRAFYSGDK 249
Query: 256 PDIAMRRLMQGFGLKS 271
D R G S
Sbjct: 250 QDSEWERGAMALGFSS 265
>gi|307292858|ref|ZP_07572704.1| glutamate racemase [Sphingobium chlorophenolicum L-1]
gi|306880924|gb|EFN12140.1| glutamate racemase [Sphingobium chlorophenolicum L-1]
Length = 267
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 114/214 (53%), Gaps = 1/214 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L FDSG+GGL +L + +P+ +Y AD GFPYG + + R+ L ++++Y
Sbjct: 9 LLFFDSGVGGLSILAPAQAALPQAPVVYAADSAGFPYGTRSEADIAARVPALLGRLVERY 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L+VIACNTA T+ +R+ + +G VPAIK AA +QS + +L T AT+R+
Sbjct: 69 RPRLAVIACNTASTIALSAVRAAL-DIPVVGTVPAIKPAALLSQSRVFGVLGTDATVRQP 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y L Y S C + S L E G + + + G + G R D++
Sbjct: 128 YVDRLAAEYGSDCTVLRHGSAALVQLAEAKLRGEPLDPAIARDALAGLLDQPGGDRMDIV 187
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VLACTH+PL+ SP P+ ++ + IARR
Sbjct: 188 VLACTHFPLVEAELAAASPRPLRFVHGGEGIARR 221
>gi|304410374|ref|ZP_07391993.1| glutamate racemase [Shewanella baltica OS183]
gi|307301915|ref|ZP_07581673.1| glutamate racemase [Shewanella baltica BA175]
gi|304351783|gb|EFM16182.1| glutamate racemase [Shewanella baltica OS183]
gi|306913953|gb|EFN44374.1| glutamate racemase [Shewanella baltica BA175]
Length = 270
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 126/231 (54%), Gaps = 3/231 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR+ ++ +G VPAIK A + ++S ++ +L T T
Sbjct: 61 SSLTQPNIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPATSLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI + ++C + + S L E+ G D + +EI+ F + +
Sbjct: 120 VNSAYVKMLITDFATECKVLVEDSEALVLASEQKLLGKAFDPDIVTQEIQRIFNKPDAFD 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
TDV+VLACTH+PLI + P V +D+ +IA R LL +I HQT
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLL-KIE-HQT 228
>gi|190151197|ref|YP_001969722.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|303252719|ref|ZP_07338881.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307248913|ref|ZP_07530924.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|307264546|ref|ZP_07546130.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|229486230|sp|B3GZ94|MURI_ACTP7 RecName: Full=Glutamate racemase
gi|189916328|gb|ACE62580.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|302648458|gb|EFL78652.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|306854608|gb|EFM86800.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|306870145|gb|EFN01905.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 267
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 8/262 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K + E +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVA----EWQTHP 175
Query: 192 T-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
T D ++L CTH+PL+ +QL P ++D + IA R LL + + ++
Sbjct: 176 TLDTVILGCTHFPLVKQELQQLLPKVKFFIDPGNGIANRVATLLSEFSLENSAQNKENIA 235
Query: 251 FLSGKPDIAMRR--LMQGFGLK 270
F + + +R +MQ +G K
Sbjct: 236 FCTKMDEEFSKREIIMQQWGFK 257
>gi|217975220|ref|YP_002359971.1| glutamate racemase [Shewanella baltica OS223]
gi|254766123|sp|B8EBM4|MURI_SHEB2 RecName: Full=Glutamate racemase
gi|217500355|gb|ACK48548.1| glutamate racemase [Shewanella baltica OS223]
Length = 274
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 126/235 (53%), Gaps = 9/235 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D++ +
Sbjct: 5 ILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDLVART 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T++R
Sbjct: 65 NAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGTVKRH 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKRTDV 194
YT +LI + CH+ L L E+ KI E+ + + DV
Sbjct: 124 YTHSLISQFADDCHVELFGCSELVMMAEQ-----KIATGEMDMHRLADLLAPVVAAQLDV 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247
+VL CTH+P+I +Q+ V +D+ +IA+R LL + N Q RV ++
Sbjct: 179 LVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNFIVEQRRVTNE 233
>gi|152998730|ref|YP_001364411.1| glutamate racemase [Shewanella baltica OS185]
gi|166231052|sp|A6WHQ9|MURI_SHEB8 RecName: Full=Glutamate racemase
gi|151363348|gb|ABS06348.1| glutamate racemase [Shewanella baltica OS185]
Length = 274
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 9/235 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D++ +
Sbjct: 5 ILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDLVART 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T++R
Sbjct: 65 NAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGTVKRH 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKRTDV 194
YT LI + CH+ L L E+ KI E+ + + DV
Sbjct: 124 YTHELISQFADDCHVELFGCSELVMMAEQ-----KIATGEMDMHRLADLLAPVVAAQLDV 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247
+VL CTH+P+I +Q+ V +D+ +IA+R LL + N Q RV ++
Sbjct: 179 LVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRRVTNE 233
>gi|160873307|ref|YP_001552623.1| glutamate racemase [Shewanella baltica OS195]
gi|189030369|sp|A9KW83|MURI_SHEB9 RecName: Full=Glutamate racemase
gi|160858829|gb|ABX47363.1| glutamate racemase [Shewanella baltica OS195]
gi|315265534|gb|ADT92387.1| glutamate racemase [Shewanella baltica OS678]
Length = 274
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 9/235 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D++ +
Sbjct: 5 ILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDLVART 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T++R
Sbjct: 65 NAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGTVKRH 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKRTDV 194
YT LI + CH+ L L E+ KI E+ + + DV
Sbjct: 124 YTHELISQFADDCHVELFGCSELVMMAEQ-----KIATGEMDMHRLADLLAPVVAAQLDV 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247
+VL CTH+P+I +Q+ V +D+ +IA+R LL + N Q RV ++
Sbjct: 179 LVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRRVTNE 233
>gi|269968664|ref|ZP_06182661.1| glutamate racemase [Vibrio alginolyticus 40B]
gi|269826751|gb|EEZ81088.1| glutamate racemase [Vibrio alginolyticus 40B]
Length = 267
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 120/222 (54%), Gaps = 7/222 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLISRVNQLVSSLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + LV S L EE G + DE+ + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELVGSTRLVDMAEEKLRGNSVSLDELTN-----ILLPLRDKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV VL CTH+PLI Q V +D+ +IARR + LL
Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGGDVTLIDSGAAIARRVKALL 220
>gi|59713040|ref|YP_205816.1| glutamate racemase [Vibrio fischeri ES114]
gi|75431448|sp|Q5E218|MURI_VIBF1 RecName: Full=Glutamate racemase
gi|59481141|gb|AAW86928.1| glutamate racemase [Vibrio fischeri ES114]
Length = 262
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 132/252 (52%), Gaps = 10/252 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
ILIFDSGIGGL V +++++ +P +IY D+ FPYG + L +R + S + K+
Sbjct: 5 ILIFDSGIGGLSVYKEIKYQLPLAKYIYAFDNAAFPYGELTESVLIERTTHIISKLCSKF 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA T++ LR + +G VPAIK AA + I +L+TPAT++R+
Sbjct: 65 PIDIVVIACNTASTVVLPSLREKL-DIPVVGVVPAIKPAALVSNK--IGLLATPATVKRS 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ + L+ S L EE GI + E+K+ + + D I
Sbjct: 122 YTYDLIKSFAPISDVQLLGSTRLVEMAEEKMIGIDVDITELKE-----ILSPWQNKVDTI 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+P + + ++ + +D+ ++IARR + LL +F+ +F S
Sbjct: 177 VLGCTHFPFLKNEIKKALGNKILLIDSGEAIARRVKQLLNGDEVESAVLFEGE-VFCSA- 234
Query: 256 PDIAMRRLMQGF 267
P I L F
Sbjct: 235 PSIKEEALNHTF 246
>gi|165977281|ref|YP_001652874.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|307251416|ref|ZP_07533331.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|307262335|ref|ZP_07543983.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|226707583|sp|B0BT16|MURI_ACTPJ RecName: Full=Glutamate racemase
gi|165877382|gb|ABY70430.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|306856584|gb|EFM88725.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306867998|gb|EFM99826.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
Length = 265
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 10/263 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE--IEGCFIEKEG 189
+ R Y + LI Y C + + + L VEE KI+ ++ +E IE +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEE-----KIRTGQVDQERLIEVIAEWQTH 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTH+PL+ +QL P ++D + IA R LL + ++
Sbjct: 175 PTLDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENI 234
Query: 250 LFLSGKPDIAMRR--LMQGFGLK 270
F + + +R +MQ +G K
Sbjct: 235 AFCTKIDEEFFKREVIMQQWGFK 257
>gi|254360933|ref|ZP_04977079.1| glutamate racemase [Mannheimia haemolytica PHL213]
gi|261492190|ref|ZP_05988760.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494308|ref|ZP_05990803.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|153092412|gb|EDN73475.1| glutamate racemase [Mannheimia haemolytica PHL213]
gi|261310038|gb|EEY11246.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312170|gb|EEY13303.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 263
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 137/262 (52%), Gaps = 7/262 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + ++R ++P H++Y D+ FPY + L +R + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDEIRKVLPHAHYLYCFDNAFFPYSEKSEAVLIERAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+K + V+ACNTA T++ LR F + +G VPAIK AAA +++ +I +L+T T
Sbjct: 61 AEKQPLDMVVVACNTASTVVLPALREHF-NFPIVGTVPAIKPAAAISETKVIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK- 190
+ R Y LI Y C + + + L VEE K+ + ++K +E +GK
Sbjct: 120 VARPYVDELIRKYAQDCTVEKIGTTDLVEIVEEKQRSGKVDMNRLQKVVEAW----QGKP 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTH+PL+ +QL P ++D IA+R LL Q F++ A
Sbjct: 176 ELDTVILGCTHFPLVKAELQQLLPDVKYFVDPGVGIAKRVLSLLEERKFQQKADFENQAF 235
Query: 251 FLSGKPDIAMRR-LMQGFGLKS 271
+++ +MQ +G +
Sbjct: 236 CTKQSSAFNIKQDVMQNWGFNN 257
>gi|307257940|ref|ZP_07539694.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306863587|gb|EFM95516.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
Length = 267
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 135/262 (51%), Gaps = 8/262 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K + E +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVA----EWQTHP 175
Query: 192 T-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
T D ++L CTH+PL+ +QL P ++D IA R LL + + ++
Sbjct: 176 TLDTVILGCTHFPLVKQELQQLLPKVKFFIDPGSGIANRVATLLSEFSLENSAQNKENIA 235
Query: 251 FLSGKPDIAMRR--LMQGFGLK 270
F + + +R +MQ +G K
Sbjct: 236 FCTKMDEEFSKREIIMQQWGFK 257
>gi|269961492|ref|ZP_06175855.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833721|gb|EEZ87817.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 268
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 131/245 (53%), Gaps = 9/245 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P ++Y+ D+ +PYG + L R+ L + ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPHMDYLYLFDNEAYPYGELDQDVLITRVNKLVAALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR+ S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 EEHQADIVVIACNTASTIVLPSLRANL-SIPVVGVVPAIKPASLLASQG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKR 191
R YT LI + + L+ S L EE K++ + I E+E + K
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEE-----KLRGESISLPELESILLPLRNK- 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV VL CTH+PLI Q V +D+ ++IARR + LL +++ ++
Sbjct: 178 VDVAVLGCTHFPLIKDEIHQALGGEVTLVDSGEAIARRVKALLTSDMKEESKEEGSKKIY 237
Query: 252 LSGKP 256
S P
Sbjct: 238 ASAPP 242
>gi|90407369|ref|ZP_01215554.1| glutamate racemase [Psychromonas sp. CNPT3]
gi|90311520|gb|EAS39620.1| glutamate racemase [Psychromonas sp. CNPT3]
Length = 271
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 3/222 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
ILIFDSG+GGL + +++R + Y++D+ FPYG L +RL+ L +D K+
Sbjct: 6 ILIFDSGVGGLSIFEEIRKKNSKLSCYYLSDNAYFPYGELTKEVLTQRLLCLLTDFTKKH 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA T+ LR F S+ +G VPAIK A T++ +I +++TPAT+ R
Sbjct: 66 PVDLIVIACNTASTIALKTLREHF-SIPIVGVVPAIKPACQLTKNNIIGLIATPATITRE 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEGKRTD 193
YTS LI + ++ + ++S L E + I ++K++ F E +R D
Sbjct: 125 YTSLLIDEFATKKQVLTLASTALVKLAERKLSALPIDNMMLQKQLSDIFKEWLMLARRPD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
IVL CTH+PL+ + +D+ +IA+R + LLP
Sbjct: 185 TIVLGCTHFPLLKADIELCFGGNIQLVDSGGAIAKRVQKLLP 226
>gi|322515537|ref|ZP_08068520.1| glutamate racemase [Actinobacillus ureae ATCC 25976]
gi|322118406|gb|EFX90666.1| glutamate racemase [Actinobacillus ureae ATCC 25976]
Length = 265
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 136/263 (51%), Gaps = 10/263 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AA +++ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAVVSETKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEG 189
+ R Y + LI Y C + + S L VEE KI+ ++ +E G I +
Sbjct: 120 VERPYVAELIEKYAKDCVVEKIGSTTLVELVEE-----KIRTGQVDQEQLGEVITEWQTH 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTH+PL+ +QL P ++D + IA R LL + + ++
Sbjct: 175 PTLDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSDLLSEFSQENSAQNRENI 234
Query: 250 LFLSGKPDIAMRR--LMQGFGLK 270
F + + +R +MQ +G K
Sbjct: 235 AFCTKMDEEFSKREVIMQQWGFK 257
>gi|304412675|ref|ZP_07394279.1| glutamate racemase [Shewanella baltica OS183]
gi|307307285|ref|ZP_07587022.1| glutamate racemase [Shewanella baltica BA175]
gi|304349019|gb|EFM13433.1| glutamate racemase [Shewanella baltica OS183]
gi|306910340|gb|EFN40772.1| glutamate racemase [Shewanella baltica BA175]
Length = 274
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 121/228 (53%), Gaps = 7/228 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCIALVCDL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGK 190
++R YT LI + CH+ L L E+ KI E+ +
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQ-----KIATGEMDMHRLADLLAPVVAA 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N
Sbjct: 175 QLDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQN 222
>gi|32035119|ref|ZP_00135171.1| COG0796: Glutamate racemase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126209303|ref|YP_001054528.1| glutamate racemase [Actinobacillus pleuropneumoniae L20]
gi|303251132|ref|ZP_07337316.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307253526|ref|ZP_07535396.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|166231024|sp|A3N3D7|MURI_ACTP2 RecName: Full=Glutamate racemase
gi|126098095|gb|ABN74923.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|302649983|gb|EFL80155.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306859027|gb|EFM91070.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
Length = 265
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 135/262 (51%), Gaps = 8/262 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K + E +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVA----EWQTHP 175
Query: 192 T-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
T D ++L CTH+PL+ +QL P ++D + IA R LL + ++
Sbjct: 176 TLDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIA 235
Query: 251 FLSGKPDIAMRR--LMQGFGLK 270
F + + +R +MQ +G K
Sbjct: 236 FCTKIDEEFFKREVIMQQWGFK 257
>gi|319424831|gb|ADV52905.1| glutamate racemase [Shewanella putrefaciens 200]
Length = 268
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 124/240 (51%), Gaps = 11/240 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P+ + Y+ D+ PYG E+ L + L ++
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKLLPQKEYCYLFDNARLPYGELEEQVLISGCVTLIEEL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACNTA TL+ LR S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 AIRIDAAIVVVACNTASTLVLPALREKL-SIPIVGVVPAIKPAALMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACGIKIKEDEIKKEIEGCFIEKEGK 190
+RR YT LI + CH+ L L E+ A GI E +
Sbjct: 120 VRRHYTHKLISQFADGCHVELFGCSELVMMAEQKVATGILNIE-----RLARILAPVVAA 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
DV+VL CTH+P+I + + + V LD+ ++IA+R LL ++ V D+ +
Sbjct: 175 DLDVLVLGCTHFPMIRNELQLVLGAGVTLLDSGEAIAKRVVALL----AQESEVLDNKTM 230
>gi|85708359|ref|ZP_01039425.1| glutamate racemase [Erythrobacter sp. NAP1]
gi|85689893|gb|EAQ29896.1| glutamate racemase [Erythrobacter sp. NAP1]
Length = 264
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 5/216 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL V +R L+P+ IY AD G PYG + + R+ L + ++Y
Sbjct: 7 ILLFDSGVGGLTVHAAVRKLLPDAPIIYAADLAGLPYGTKSEAEIAARVAGLLGRMSERY 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
QP L IACNTA T+ +R + +G VPAIK A+A T++G I +L T AT+R+
Sbjct: 67 QPRLVCIACNTASTIALGMVRDVL-EVPIVGTVPAIKPASAITKTGTIGLLGTQATVRQA 125
Query: 136 YTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y NL + + + H S ++ A+ E G ++ I+ + G + D
Sbjct: 126 YVDNLEAEFAADKRLLRHGASGLVRAA--EAKLRGEEVDRSVIQSAVATLRAMDGGDQID 183
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+VLACTH+PL+ V ++D +D IARR
Sbjct: 184 TVVLACTHFPLLTEELGAEFGDGVSFVDGADGIARR 219
>gi|85060131|ref|YP_455833.1| glutamate racemase [Sodalis glossinidius str. 'morsitans']
gi|123518781|sp|Q2NQZ7|MURI_SODGM RecName: Full=Glutamate racemase
gi|84780651|dbj|BAE75428.1| glutamate racemase [Sodalis glossinidius str. 'morsitans']
Length = 290
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 123/220 (55%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL + ++R +P H++YV D+ FPYG + + R++ + + +
Sbjct: 27 TILVFDSGVGGLSIYNEVRQTLPNAHYLYVFDNEAFPYGEKPEQFIVDRVVAIVGAMWRQ 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++ L ++ACNTA T+ LR FP +G VPAIK AA T++G++ +L+T AT++R
Sbjct: 87 HKIDLVIVACNTASTISLPALRERFPC-PIIGVVPAIKPAARLTRNGIVGLLATRATVQR 145
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT +LI Y C I + + L E G + ++K + + + D
Sbjct: 146 SYTHDLISQYAGDCQILQLGTAELVDMAEARLHGELVPLPVLRKLLRPWL--RAAEPPDT 203
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+PL+ + + P +D+ +IARRA L+
Sbjct: 204 VVLGCTHFPLLSQELQAVLPEGTRLVDSGSAIARRAAWLV 243
>gi|27364591|ref|NP_760119.1| glutamate racemase [Vibrio vulnificus CMCP6]
gi|320154994|ref|YP_004187373.1| glutamate racemase [Vibrio vulnificus MO6-24/O]
gi|29839520|sp|Q8DD39|MURI_VIBVU RecName: Full=Glutamate racemase
gi|27360710|gb|AAO09646.1| glutamate racemase [Vibrio vulnificus CMCP6]
gi|319930306|gb|ADV85170.1| glutamate racemase [Vibrio vulnificus MO6-24/O]
Length = 263
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 128/235 (54%), Gaps = 7/235 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E Q ++LIFDSG+GGL V Q++ +PE ++ Y+ D+ +PYG L R+ L
Sbjct: 2 ESSNQPNVLIFDSGVGGLSVFQEINKRLPEVNYYYLFDNQAYPYGELSQETLLARVEALV 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ ++ L VIACNTA T++ LR+ P + +G VPAIK A+ + +++T
Sbjct: 62 VKMTQQFAIDLVVIACNTASTIVLPTLRAKLP-IPVVGVVPAIKPASLLANRA-VGLIAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PAT+ R YT +LI + + + L+ S L EE G ++ + E+ ++
Sbjct: 120 PATVTRQYTHDLIRDFAHEKEVELLGSTRLVDIAEEKLRGRQVDQQEL-----AMILKPM 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ DV VL CTH+PL+ +Q+ + +D+ ++IARR + LL +++ T+
Sbjct: 175 KHKVDVAVLGCTHFPLLKEEIQQVLGDEIILVDSGEAIARRVQSLLHQLSPQSTK 229
>gi|37678352|ref|NP_932961.1| glutamate racemase [Vibrio vulnificus YJ016]
gi|61214264|sp|Q7MQ40|MURI_VIBVY RecName: Full=Glutamate racemase
gi|37197091|dbj|BAC92932.1| glutamate racemase [Vibrio vulnificus YJ016]
Length = 263
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 128/235 (54%), Gaps = 7/235 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E Q ++LIFDSG+GGL V Q++ +PE ++ Y+ D+ +PYG L R+ L
Sbjct: 2 ESSNQPNVLIFDSGVGGLSVFQEINKRLPEVNYYYLFDNQAYPYGELSQETLLARVEALV 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ ++ L VIACNTA T++ LR+ P + +G VPAIK A+ + +++T
Sbjct: 62 VKMTQQFAIDLVVIACNTASTIVLPALRAKLP-IPVVGVVPAIKPASLLANRA-VGLIAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PAT+ R YT +LI + + + L+ S L EE G ++ + E+ ++
Sbjct: 120 PATVTRQYTHDLIRDFAHEKEVELLGSTRLVDIAEEKLRGRQVDQQEL-----AMILKPM 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ DV VL CTH+PL+ +Q+ + +D+ ++IARR + LL +++ T+
Sbjct: 175 KHKVDVAVLGCTHFPLLKEEIQQVLGDEIILVDSGEAIARRVQSLLHQLSPQSTK 229
>gi|268593423|ref|ZP_06127644.1| glutamate racemase [Providencia rettgeri DSM 1131]
gi|291311122|gb|EFE51575.1| glutamate racemase [Providencia rettgeri DSM 1131]
Length = 287
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 123/220 (55%), Gaps = 3/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL V ++++ ++P H+IY D+ FPYG + + R+ + + I K
Sbjct: 27 TILVFDSGVGGLSVYREVKKMIPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQIVNAIAAK 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ +++IACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+ R
Sbjct: 87 HPLTIAIIACNTASTVSLPNLRAHF-TFPVVGVVPAIKPATKLTRNGVVGLLATKGTVNR 145
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + + C + + S L E G + DE+ + + + + D
Sbjct: 146 EYTKELIERFATDCKVISLGSAELVQLAERKLHGETLPLDEVAQTVRPWI--RMPEPPDT 203
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++L CTH+PL++ ++ P ++D+ +IARR L+
Sbjct: 204 VILGCTHFPLLIEELEKVLPNGTRFIDSGSAIARRTVWLI 243
>gi|120600465|ref|YP_965039.1| glutamate racemase [Shewanella sp. W3-18-1]
gi|146294593|ref|YP_001185017.1| glutamate racemase [Shewanella putrefaciens CN-32]
gi|120560558|gb|ABM26485.1| glutamate racemase [Shewanella sp. W3-18-1]
gi|145566283|gb|ABP77218.1| glutamate racemase [Shewanella putrefaciens CN-32]
Length = 268
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 124/240 (51%), Gaps = 11/240 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P+ + Y+ D+ PYG E+ L + L ++
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKLLPQKEYCYLFDNARLPYGELEEQVLISGCVTLIEEL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACNTA TL+ LR S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 AIRIDAAIVVVACNTASTLVLPALREKL-SIPIVGVVPAIKPAALMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACGIKIKEDEIKKEIEGCFIEKEGK 190
+RR YT LI + CH+ L L E+ A GI E +
Sbjct: 120 VRRHYTHKLISQFADGCHVELFGCSELVMMAEQKVATGILNIE-----RLARILAPVVAA 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
DV+VL CTH+P+I + + + V LD+ ++IA+R LL ++ V D+ +
Sbjct: 175 DLDVLVLGCTHFPMIRNELQLVLGAGVTLLDSGEAIAKRVVALL----AQESGVLDNKTM 230
>gi|149374689|ref|ZP_01892463.1| glutamate racemase [Marinobacter algicola DG893]
gi|149361392|gb|EDM49842.1| glutamate racemase [Marinobacter algicola DG893]
Length = 283
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 119/215 (55%), Gaps = 5/215 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V + +P +Y+AD+ GFPYG + + +R L L ++
Sbjct: 6 VLVFDSGVGGLSVADCIHRQLPGVKLVYLADNAGFPYGAQPESVVIERSQALIRLALSEF 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA T++ LR+ S+ +G VPA+K AAA +++ I +L+TPAT+RR
Sbjct: 66 PCDVIVVACNTASTVVLPYLRA-MTSIPVVGVVPAVKPAAAVSENRRIGLLATPATVRRP 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y ++LI + S C + + L +E G + E + ++ D +
Sbjct: 125 YLADLIDEFASDCTVERLGHPDLVQWIENLVSGSPVPEQALSVALQ----PFRDVGVDTV 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
VL CTHYPLI + ++ P W+D+ ++IARRA
Sbjct: 181 VLGCTHYPLIKDLLQRQLPAVKHWVDSGEAIARRA 215
>gi|28899710|ref|NP_799315.1| glutamate racemase [Vibrio parahaemolyticus RIMD 2210633]
gi|260361662|ref|ZP_05774689.1| glutamate racemase [Vibrio parahaemolyticus K5030]
gi|260879377|ref|ZP_05891732.1| glutamate racemase [Vibrio parahaemolyticus AN-5034]
gi|260897204|ref|ZP_05905700.1| glutamate racemase [Vibrio parahaemolyticus Peru-466]
gi|260901359|ref|ZP_05909754.1| glutamate racemase [Vibrio parahaemolyticus AQ4037]
gi|33301374|sp|Q87KP1|MURI_VIBPA RecName: Full=Glutamate racemase
gi|28807962|dbj|BAC61199.1| glutamate racemase [Vibrio parahaemolyticus RIMD 2210633]
gi|308089317|gb|EFO39012.1| glutamate racemase [Vibrio parahaemolyticus Peru-466]
gi|308092828|gb|EFO42523.1| glutamate racemase [Vibrio parahaemolyticus AN-5034]
gi|308108436|gb|EFO45976.1| glutamate racemase [Vibrio parahaemolyticus AQ4037]
gi|308111294|gb|EFO48834.1| glutamate racemase [Vibrio parahaemolyticus K5030]
Length = 270
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 122/222 (54%), Gaps = 7/222 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+K + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKS-----ILSPLCNKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV VL CTH+PLI + +Q+ V +D+ ++IARR + LL
Sbjct: 179 DVAVLGCTHFPLIKNEIQQVLGSNVVLIDSGEAIARRVKALL 220
>gi|328472462|gb|EGF43328.1| glutamate racemase [Vibrio parahaemolyticus 10329]
Length = 270
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 122/222 (54%), Gaps = 7/222 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+K + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKS-----ILSPLCNKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV VL CTH+PLI + +Q+ V +D+ ++IARR + LL
Sbjct: 179 DVAVLGCTHFPLIKNEIQQVLGSNVVLIDSGEAIARRVKALL 220
>gi|126176362|ref|YP_001052511.1| glutamate racemase [Shewanella baltica OS155]
gi|166231051|sp|A3DA79|MURI_SHEB5 RecName: Full=Glutamate racemase
gi|125999567|gb|ABN63642.1| glutamate racemase [Shewanella baltica OS155]
Length = 274
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 7/224 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D++ +
Sbjct: 5 ILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDLVART 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T++R
Sbjct: 65 NAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGTVKRH 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKRTDV 194
YT LI + CH+ L L E+ KI ++ + + DV
Sbjct: 124 YTHELISQFADDCHVELFGCSELVMMAEQ-----KIATGQMDMHRLADLLAPVVAAQLDV 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+VL CTH+P+I +Q+ V +D+ +IA+R LL + N
Sbjct: 179 LVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQN 222
>gi|294142952|ref|YP_003558930.1| glutamate racemase [Shewanella violacea DSS12]
gi|293329421|dbj|BAJ04152.1| glutamate racemase [Shewanella violacea DSS12]
Length = 291
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 119/222 (53%), Gaps = 5/222 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L IL+FDSGIGGL +L ++R +P ++IY+ D+ PYG + L + L +D
Sbjct: 14 LSKPILVFDSGIGGLTILDEIRLALPNENYIYLFDNARLPYGELGEQELISGSVSLITDF 73
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + +IACNTA TLI LR+ ++ +G VPAIK AA ++ I +L+TP T
Sbjct: 74 VKNESVSMVIIACNTASTLILPSLRAAL-NIPVVGVVPAIKPAALLSKKKHIGLLATPGT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++RTYT LI + +C + L +S L E+ A G + + ++ + + +
Sbjct: 133 IKRTYTHELIEQFAGECKVDLYASSELVLLAEQKAAGHPVTQQQLARILSPIY----QSE 188
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D +VL CTH+P++ ++ + LD+ ++A R L
Sbjct: 189 LDTLVLGCTHFPILRQEMQEYLGDKISLLDSGKAVAARVVTL 230
>gi|296105345|ref|YP_003615491.1| glutamate racemase [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295059804|gb|ADF64542.1| glutamate racemase [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 260
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 3/219 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEDFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR+ F +G VPAIK AA T +G++ +L+T T++R
Sbjct: 61 PLALAVIACNTASTVSLPALRAKF-QFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + ++C I ++ S L E G + +E+++ + E D +
Sbjct: 120 YTRELIDRFANECQIAMLGSAELVEMAEAKLHGKTVPLEELRRILRPWLRMPEPP--DTV 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ ++ P +D+ +IARR LL
Sbjct: 178 VLGCTHFPLLQEELLEVLPEGTRLVDSGAAIARRTAWLL 216
>gi|28275188|ref|NP_715848.2| glutamate racemase [Shewanella oneidensis MR-1]
Length = 302
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 120/230 (52%), Gaps = 13/230 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E L IL+FDSGIGGL VL ++R +P + + YV D+ PYG E+ L + L
Sbjct: 27 ETGLSQPILVFDSGIGGLSVLAEIRKRLPHHDYCYVFDNARLPYGELEEQELVSGCVALI 86
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S ++++ + V+ACNTA T++ LR+ + +G VPAIK AA ++S I +L+T
Sbjct: 87 SQLVERTHACIVVVACNTASTVVLPALRAKL-HIPVVGVVPAIKPAALLSKSKRIGLLAT 145
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSS----MILASRVEEYACGIKIKEDEIKKEIEGCF 184
P T++R YT LI + CH+ L M+ ++ GI + ++
Sbjct: 146 PGTVKRHYTHELISQFADDCHVELFGCSELVMMAEHKIATGQLGIARLTQILSPVVDA-- 203
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV+VL CTH+P++ +Q+ V LD+ +IA+R LL
Sbjct: 204 ------NLDVLVLGCTHFPMLRDELQQVLGLGVTLLDSGAAIAKRVDTLL 247
>gi|145297189|ref|YP_001140030.1| glutamate racemase [Aeromonas salmonicida subsp. salmonicida A449]
gi|142849961|gb|ABO88282.1| glutamate racemase [Aeromonas salmonicida subsp. salmonicida A449]
Length = 263
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 140/260 (53%), Gaps = 8/260 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL + +++R +P +++ Y D+ FPYG + AL L S ++ +
Sbjct: 3 NILVFDSGMGGLTIYREIRRALPAHNYFYCFDNANFPYGELSESALIAACTRLVSHMVAE 62
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ L VIACNTA T+ LR+ ++ +G VPAIK AAA T++G I +L+TP T+ R
Sbjct: 63 HVIDLVVIACNTASTIALPSLRAAL-TIPVVGVVPAIKPAAALTRNGCIGLLATPGTVSR 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT +LI + + L + L E G + + +E+ ++E E +R D
Sbjct: 122 EYTHHLIAQFAPGKRVLLKGATELVIEAEHKLAGRPVNM-ALLQEVLTDWMEGE-ERPDT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+PL+ RQL P +D+ ++ARR LL + ++ + +
Sbjct: 180 LVLGCTHFPLLNDEIRQLMPG-CQLVDSGSAVARRVAHLLATVAEQPSQAVVQARAYCT- 237
Query: 255 KPDIAMRRL---MQGFGLKS 271
+ D ++L +Q +GL S
Sbjct: 238 RLDAQAQKLTAPLQAWGLSS 257
>gi|170718701|ref|YP_001783892.1| glutamate racemase [Haemophilus somnus 2336]
gi|189030361|sp|B0URZ3|MURI_HAES2 RecName: Full=Glutamate racemase
gi|168826830|gb|ACA32201.1| glutamate racemase [Haemophilus somnus 2336]
Length = 267
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 126/229 (55%), Gaps = 4/229 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +IL FDSG+GGL V ++ + L+P+ H++Y D+ FPY ++ + R + + I
Sbjct: 5 IQPTILFFDSGVGGLSVYKETKQLLPDCHYLYGFDNGFFPYSEKDEKDIIDRTLRICQKI 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L VIACNTA T++ ELR F S+ +G VPAIK AA +++ I +++T T
Sbjct: 65 NQTYPLDLIVIACNTASTVVLPELRRNF-SIPIVGTVPAIKPAAEMSETKHIGLIATKGT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++RTY ++LI +Y C + + S L E+ G ++ + +K+E+ K K
Sbjct: 124 IKRTYVNDLIKNYAYHCMVEKIGSTKLVEIAEQKLRGGEVDLNVLKQELSPW---KTMKS 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
D +VL CTH+PLI P ++ + +IA+R + LL I
Sbjct: 181 LDSVVLGCTHFPLIKEEIECCLPQVKFFVSSGKAIAKRVKFLLKGIEVR 229
>gi|92113464|ref|YP_573392.1| glutamate racemase [Chromohalobacter salexigens DSM 3043]
gi|91796554|gb|ABE58693.1| glutamate racemase [Chromohalobacter salexigens DSM 3043]
Length = 267
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSG+GGL V+ +R +P YV D+ PYG D L R++
Sbjct: 1 MTAPILIFDSGVGGLSVVGALRARLPGAALAYVCDNAALPYGTKPDAWLVARIVAACRAA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ V+ACNTA TL LR + ++ +G VPAIK AA +SG+ +L+T AT
Sbjct: 61 VAASGACALVVACNTASTLALQALRESL-TVPVIGTVPAIKPAAQLLRSGVFGLLATSAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + + C + +++ L ++ E G E I + + E
Sbjct: 120 VSRPYTQRLIGEFATHCTVIRLAADPLVAQAERVLAGRAPDEAVIAASLAPLW---EAPD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D +VL CTH+PL+ +P V W+D+ D+IARR
Sbjct: 177 LDTVVLGCTHFPLLRETLAAQAPRDVRWIDSGDAIARR 214
>gi|113461596|ref|YP_719665.1| glutamate racemase [Haemophilus somnus 129PT]
gi|123132293|sp|Q0I5M2|MURI_HAES1 RecName: Full=Glutamate racemase
gi|112823639|gb|ABI25728.1| glutamate racemase [Haemophilus somnus 129PT]
Length = 267
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 126/229 (55%), Gaps = 4/229 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +IL FDSG+GGL V ++ + L+P+ H++Y D+ FPY ++ + R + + I
Sbjct: 5 IQPTILFFDSGVGGLSVYKETKQLLPDCHYLYCFDNGFFPYSEKDEKDIIDRTLRICQKI 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L VIACNTA T++ ELR F S+ +G VPAIK AA +++ I +++T T
Sbjct: 65 NQAYPLDLIVIACNTASTVVLPELRRNF-SIPIVGTVPAIKPAAEMSETKHIGLIATKGT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++RTY ++LI +Y C + + S L E+ G ++ + +K+E+ + K
Sbjct: 124 IKRTYVNDLIKNYAHHCMVEKIGSTKLVEIAEQKLRGGEVDLNVLKQELSPW---QTMKS 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
D +VL CTH+PLI P ++ + +IA+R + LL I
Sbjct: 181 LDSVVLGCTHFPLIKEEIECCLPQVKFFVSSGKAIAKRVKFLLKGIEVR 229
>gi|219871943|ref|YP_002476318.1| glutamate racemase [Haemophilus parasuis SH0165]
gi|254766116|sp|B8F7R8|MURI_HAEPS RecName: Full=Glutamate racemase
gi|219692147|gb|ACL33370.1| glutamate racemase [Haemophilus parasuis SH0165]
Length = 267
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 134/262 (51%), Gaps = 8/262 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P+ H++Y D+ FPY + L + + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRENLPDAHYLYCFDNAYFPYSEKSEAVLIELAVGIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y + V+ACNTA T++ LR F +M +G VPAIK AA +Q+ I +L+T T
Sbjct: 61 AENYPLDMVVVACNTASTVVLPALRERF-AMPIVGTVPAIKPAAQISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y LI Y C + + S L VEE + ++K +E E +
Sbjct: 120 VTRPYVDELIERYAKDCVVERIGSTDLVEIVEEKQQTGSVDMRRLQKVVE----EWQSHP 175
Query: 192 T-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
T D ++L CTH+PL+ +QL P ++D + IA R LL + + ++
Sbjct: 176 TLDTVILGCTHFPLVKEELQQLLPRVSFFVDPGNGIANRVVSLLQDVKRNVNNENKENQA 235
Query: 251 FLSGKPDIAMRR--LMQGFGLK 270
F + + ++R +MQ +G K
Sbjct: 236 FCTQNSENFLKREKVMQNWGFK 257
>gi|262404892|ref|ZP_06081446.1| glutamate racemase [Vibrio sp. RC586]
gi|262348976|gb|EEY98115.1| glutamate racemase [Vibrio sp. RC586]
Length = 265
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELAQETLIARVDALVTRMVEEE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI ++ + ++ L+ S L + EE G + DE++ + DV
Sbjct: 127 YTQELIRNFSANKNVELLGSTRLVNMAEEKLRGKPLDLDELE-----SILHPLKHTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGVAIARRVQELL 220
>gi|261210140|ref|ZP_05924437.1| glutamate racemase [Vibrio sp. RC341]
gi|260840680|gb|EEX67229.1| glutamate racemase [Vibrio sp. RC341]
Length = 265
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELAQETLIARVDALVTRMVEEE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI ++ + ++ L+ S L + EE G + DE++ + DV
Sbjct: 127 YTQELIRNFSANKNVELLGSTRLVNMAEEKLRGKPLDLDELE-----SILHPLKHTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGVAIARRVQELL 220
>gi|86148655|ref|ZP_01066936.1| glutamate racemase [Vibrio sp. MED222]
gi|85833574|gb|EAQ51751.1| glutamate racemase [Vibrio sp. MED222]
Length = 268
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 7/225 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ +Q +ILIFDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ + +
Sbjct: 5 ESIQKNILIFDSGVGGLSVYKEISHLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSIVA 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ + + VIACNTA T++ LR+ P + +G VPAIK A+ + +++TP
Sbjct: 65 SFVASHAIDIVVIACNTASTIVLPTLRANNP-IPIVGVVPAIKPASLLANKA-VGLIATP 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R YT LI ++ S + L+ S L E+ G I +E+++ ++
Sbjct: 123 ATITREYTHELIKNFSSNKRVELLGSTQLVDMAEDKLRGEAINLEELQQILQPMI----- 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV VL CTH+PLI +Q+ V +D+ +IA+R + LL
Sbjct: 178 NTIDVAVLGCTHFPLIKSEIQQVLGKNVMLIDSGKAIAKRVQDLL 222
>gi|218710895|ref|YP_002418516.1| glutamate racemase [Vibrio splendidus LGP32]
gi|218323914|emb|CAV20275.1| glutamate racemase [Vibrio splendidus LGP32]
Length = 276
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 7/225 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ +Q +ILIFDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ + +
Sbjct: 13 ESIQKNILIFDSGVGGLSVYKEISQLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSIVA 72
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ + + VIACNTA T++ LR+ P + +G VPAIK A+ + +++TP
Sbjct: 73 SFVASHAIDIVVIACNTASTIVLPTLRANNP-IPIVGVVPAIKPASLLANKA-VGLIATP 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R YT LI ++ S + L+ S L E+ G I +E+++ ++
Sbjct: 131 ATITREYTHELIKNFSSNKRVELLGSTQLVDMAEDKLRGEAINLEELRQILQPMI----- 185
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV VL CTH+PLI +Q+ V +D+ +IA+R + LL
Sbjct: 186 NTIDVAVLGCTHFPLIKSEIQQVLGKNVMLIDSGKAIAKRVQDLL 230
>gi|261249981|ref|ZP_05942558.1| glutamate racemase [Vibrio orientalis CIP 102891]
gi|260939485|gb|EEX95470.1| glutamate racemase [Vibrio orientalis CIP 102891]
Length = 267
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 127/233 (54%), Gaps = 7/233 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K Q ILIFDSG+GGL V Q+++ +P+ ++Y+ D+ +PYG + L R+ L +
Sbjct: 6 KQQAKILIFDSGVGGLSVYQEIQSKLPQLEYLYIFDNEAYPYGELDHDTLIDRVDRLVTS 65
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ K+ L VIACNTA T++ LR+ ++ +G VPAIK A+ + +++TPA
Sbjct: 66 LVAKHHIDLVVIACNTASTIVLPTLRAKL-TIPVVGVVPAIKPASNLANKA-VGLIATPA 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ R YT +LI + + L+ S L EE G + E+K+ + IE
Sbjct: 124 TVTRPYTHDLIRDFSQSKPVELLGSTRLVDIAEEKLRGKAVDLAELKQILAA--IE---N 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ DV VL CTH+PLI + + V +D+ ++IARR LL +TR
Sbjct: 179 KVDVAVLGCTHFPLIKQEIQAVLTDRVLLVDSGEAIARRVEDLLETTGKKETR 231
>gi|85373785|ref|YP_457847.1| glutamate racemase [Erythrobacter litoralis HTCC2594]
gi|84786868|gb|ABC63050.1| glutamate racemase [Erythrobacter litoralis HTCC2594]
Length = 256
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 1/212 (0%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FD+G+GGL VL ++R ++P IY AD G PYG + + R+ L + ++YQP
Sbjct: 1 MFDTGVGGLTVLAELRKVLPNAPVIYAADYAGLPYGTKTEAEVAARVCGLLGRMSERYQP 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R+ Y
Sbjct: 61 RAICIACNTASTIALGMVREVL-EVPIIGTVPAIKPAAAMTETGVIGLLGTAATVRQPYV 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L + S + ++ L E G + + ++ E+ + R D +VL
Sbjct: 120 DRLEAEFASDTVLIRFAASGLVDLAEAKLRGETVGTNSLRAEVRALLEAENADRIDTLVL 179
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
ACTH+PL+ Q+ V + ++ IARR
Sbjct: 180 ACTHFPLLEEELLQVFGPQVRMVHGAEGIARR 211
>gi|114561314|ref|YP_748827.1| glutamate racemase [Shewanella frigidimarina NCIMB 400]
gi|122301132|sp|Q089S6|MURI_SHEFN RecName: Full=Glutamate racemase
gi|114332607|gb|ABI69989.1| glutamate racemase [Shewanella frigidimarina NCIMB 400]
Length = 259
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 117/225 (52%), Gaps = 5/225 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL V+ ++R +P + + Y+ D+ PYGN + L + L +
Sbjct: 1 MSGPILVFDSGIGGLSVMNEIRKQLPLHDYCYLFDNARLPYGNLSEQELITGCVALITHH 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACNTA TL+ LR ++ +G VPAIK AA ++ I +L+TP T
Sbjct: 61 ARRLNASIVVVACNTASTLVLPLLRQQL-TIPIVGVVPAIKPAAMLSKKKHIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI+ + C + L + L E+Y +I D++ +
Sbjct: 120 VKRDYTQALINQFAGNCKVELFGTSDLVLLAEQYVAQQQIDMDKLNE----ILAPIAASN 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
DV+VL CTH+P+I V LD+ +++A+R R LL +
Sbjct: 176 IDVLVLGCTHFPMIATEISHYLGEGVTLLDSGEAVAKRVRFLLSK 220
>gi|330827753|ref|YP_004390705.1| glutamate racemase [Aeromonas veronii B565]
gi|328802889|gb|AEB48088.1| Glutamate racemase [Aeromonas veronii B565]
Length = 267
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 124/220 (56%), Gaps = 4/220 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL + +++R ++P +++ Y D+ FPYG + AL L + ++ +
Sbjct: 3 NILVFDSGMGGLTIYREIRRVLPAHNYFYCFDNANFPYGELSEPALIAACTRLVTTMVAR 62
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+Q L VIACNTA T+ LR + +G VPAIK AAA T++G I +L+TP T+ R
Sbjct: 63 HQIDLVVIACNTASTIALPALREAL-DIPVVGVVPAIKPAAAQTRNGCIGLLATPGTVSR 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + + L + L E G+ + + +E+ ++E E ++ D
Sbjct: 122 DYTHELIAQFAPSKRVLLKGTTELVIEAEHKLSGLPVNM-ALLREVLADWLEGE-EKPDT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+PL+ QL P + +D+ ++A+R LL
Sbjct: 180 LVLGCTHFPLLNEEIGQLMPQCM-LIDSGSAVAKRVAWLL 218
>gi|301156626|emb|CBW16097.1| glutamate racemase [Haemophilus parainfluenzae T3T1]
Length = 263
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 121/227 (53%), Gaps = 6/227 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L FDSG+GGL V ++ + LMP+ H++Y D+ GFPY + + +R + + I
Sbjct: 5 TVLFFDSGMGGLSVYREAKKLMPDNHYLYCFDNAGFPYSEKSEETIIQRTLDICKKINQN 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y VIACNTA T++ LR F S+ +G VPAIK AA +Q+ I +L+T T++R
Sbjct: 65 YPLDAIVIACNTASTVVLPPLREQF-SIPIVGTVPAIKPAAEISQTKHIGLLATKGTVKR 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG-CFIEKEGKRTD 193
Y ++LIH + S C + + S L E G + +K E+ IE D
Sbjct: 124 PYVNDLIHQFASHCIVERLGSTKLVEIAEHKIQGKSVDLIALKNELSPWASIE----NLD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
I L CTH+PLI + P +++D +IA+R + LL ++
Sbjct: 180 TICLGCTHFPLIKDEIQICLPQVKNFMDPGFAIAKRLQFLLDKLEVQ 226
>gi|29839535|sp|Q8EK90|MURI_SHEON RecName: Full=Glutamate racemase
gi|24345608|gb|AAN53293.1|AE015470_6 glutamate racemase [Shewanella oneidensis MR-1]
Length = 273
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 119/227 (52%), Gaps = 13/227 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + + YV D+ PYG E+ L + L S +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKRLPHHDYCYVFDNARLPYGELEEQELVSGCVALISQL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+ + +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHACIVVVACNTASTVVLPALRAKL-HIPVVGVVPAIKPAALLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSS----MILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
++R YT LI + CH+ L M+ ++ GI + ++
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEHKIATGQLGIARLTQILSPVVDA----- 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV+VL CTH+P++ +Q+ V LD+ +IA+R LL
Sbjct: 175 ---NLDVLVLGCTHFPMLRDELQQVLGLGVTLLDSGAAIAKRVDTLL 218
>gi|325577829|ref|ZP_08148104.1| glutamate racemase [Haemophilus parainfluenzae ATCC 33392]
gi|325160574|gb|EGC72700.1| glutamate racemase [Haemophilus parainfluenzae ATCC 33392]
Length = 263
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 123/226 (54%), Gaps = 6/226 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++++L FDSG+GGL V ++ + LMP+ H++Y D+ GFPY + + +R + + I
Sbjct: 3 KSTVLFFDSGMGGLSVYREAKKLMPDNHYLYCFDNAGFPYSEKSEETIIQRTLDICKKIN 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y VIACNTA T++ LR F S+ +G VPAIK AA +Q+ I +L+T T+
Sbjct: 63 QDYPLDAIVIACNTASTVVLPPLREQF-SIPIVGTVPAIKPAAEISQTKHIGLLATKGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG-CFIEKEGKR 191
+R Y ++LIH + S C + + S L E G + +K E+ IE
Sbjct: 122 KRPYVNDLIHQFASHCVVERLGSTKLVEIAEHKIQGKSVDLIALKNELTPWASIE----N 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
D I L CTH+PLI + P +++D +IA+R + LL ++
Sbjct: 178 LDTICLGCTHFPLIKDEIQICLPQVKNFMDPGFAIAKRLQFLLDKL 223
>gi|156935905|ref|YP_001439821.1| glutamate racemase [Cronobacter sakazakii ATCC BAA-894]
gi|156534159|gb|ABU78985.1| hypothetical protein ESA_03799 [Cronobacter sakazakii ATCC BAA-894]
Length = 253
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 133/249 (53%), Gaps = 4/249 (1%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y L+VI
Sbjct: 1 MGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVEIVTAVQARYPLALAVI 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACN+A T+ LR F + +G VPAIK AA T +G++ +L+T T++R YT LI
Sbjct: 61 ACNSASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGMVGLLATRGTVKRPYTHELIA 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++C I ++ S L E G + + +++ + + + D +VL CTH+
Sbjct: 120 RFANECQIEMLGSAELVEIAEAKLHGEPVSLEALRRVLRPWL--RMPEPPDTVVLGCTHF 177
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA-MR 261
PL+ Q+ P +D+ +IARR LL ++ A ++ P++A +
Sbjct: 178 PLLAEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDACSSDENIAYCMALTPEVAQLM 237
Query: 262 RLMQGFGLK 270
++Q +G
Sbjct: 238 SVLQRYGFN 246
>gi|229525050|ref|ZP_04414455.1| glutamate racemase [Vibrio cholerae bv. albensis VL426]
gi|229338631|gb|EEO03648.1| glutamate racemase [Vibrio cholerae bv. albensis VL426]
Length = 265
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 133/244 (54%), Gaps = 15/244 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +L+TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLLATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFL 252
VL CTH+PLI +Q+ V +D+ +IARR + LL + T+Q H ++
Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGVGTNQ-----KHQIYA 236
Query: 253 SGKP 256
S P
Sbjct: 237 SAPP 240
>gi|197336453|ref|YP_002157219.1| glutamate racemase [Vibrio fischeri MJ11]
gi|226707593|sp|B5FCA3|MURI_VIBFM RecName: Full=Glutamate racemase
gi|197317943|gb|ACH67390.1| glutamate racemase [Vibrio fischeri MJ11]
Length = 261
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 133/252 (52%), Gaps = 11/252 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
ILIFDSGIGGL V +++++ +P +IY D+ FPYG + L +R + S++ ++
Sbjct: 5 ILIFDSGIGGLSVYKEIKYQLPLAKYIYAFDNAAFPYGELTESVLIERTTHIISELCSQF 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA T++ LR + +G VPAIK AA + I +L+TPAT++R+
Sbjct: 65 PIDIVVIACNTASTVVLPSLRDKL-DIPVVGVVPAIKPAALVSNK--IGLLATPATVKRS 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI S+ + L+ S L EE GI + + K+++ + D I
Sbjct: 122 YTYDLIKSFAPISDVQLLGSTRLVEMAEEKMIGIDV-DMRAKRDLSPW-----QNKVDTI 175
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+P + + ++ + +D+ ++IARR + LL +F+ +F S
Sbjct: 176 VLGCTHFPFLKNEIKKALGNKILLIDSGEAIARRVKQLLNGDGVESAVLFEGE-VFCSA- 233
Query: 256 PDIAMRRLMQGF 267
P I L F
Sbjct: 234 PSIKEEALNHTF 245
>gi|167626058|ref|YP_001676352.1| glutamate racemase [Shewanella halifaxensis HAW-EB4]
gi|189030370|sp|B0TMV5|MURI_SHEHH RecName: Full=Glutamate racemase
gi|167356080|gb|ABZ78693.1| glutamate racemase [Shewanella halifaxensis HAW-EB4]
Length = 266
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 136/259 (52%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I+IFDSGIGGL + +++ ++P+ + Y+ D+ PYG E+ L K + L +
Sbjct: 1 MSGPIVIFDSGIGGLSIFDEIKKVLPDQGYCYLFDNARLPYGELEESVLIKGCVDLICEQ 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + VL V+ACN+A TL+ LR+ S+ +G VPAIK AA +++ I +L+T T
Sbjct: 61 VKRIDAVLVVVACNSASTLVLPGLRARL-SIPIVGVVPAIKPAAQISKTRHIGLLATHGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT LI + C + L S L E G K+ D IK E + I+
Sbjct: 120 IKRSYTRELIKEFAGDCKVDLFGSSELVMLAEAKLAGEKL--DLIKLESQLKPIQH--SD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D +VL CTH+P+I +Q+ V LD+ +IA+R LL I + A+
Sbjct: 176 LDTLVLGCTHFPIIADEIQQVLGAGVKLLDSGKAIAQRVSYLLENIEDKLDNSAGELMAI 235
Query: 251 FLSGK--PDIAMRRLMQGF 267
+ + + P +A R +GF
Sbjct: 236 YTTEEITPGLATRLAEKGF 254
>gi|153826314|ref|ZP_01978981.1| glutamate racemase [Vibrio cholerae MZO-2]
gi|149739982|gb|EDM54161.1| glutamate racemase [Vibrio cholerae MZO-2]
Length = 265
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 134/244 (54%), Gaps = 15/244 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFL 252
VL CTH+PLI +Q+ V +D+ +IARR + LL ++T+Q H ++
Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGVDTNQ-----KHQIYA 236
Query: 253 SGKP 256
S P
Sbjct: 237 SAPP 240
>gi|304413419|ref|ZP_07394892.1| glutamate racemase [Candidatus Regiella insecticola LSR1]
gi|304284262|gb|EFL92655.1| glutamate racemase [Candidatus Regiella insecticola LSR1]
Length = 292
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 126/234 (53%), Gaps = 3/234 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
++ N +++ + ++LIFDSG+GGL + Q++R L+P H+IY D+ FPYG + +
Sbjct: 17 LQARNAKVDQRFRPTVLIFDSGVGGLSIYQEIRQLLPNIHYIYAFDNQAFPYGEKTEAFI 76
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++ L VIACNTA T+ LR F +G VPAIK A T++
Sbjct: 77 VERVLKIVTRVQQQHPLTLVVIACNTASTVSLPTLRKYF-FFPIVGVVPAIKPAVQLTRN 135
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L+T AT+ TY +LI + + C I + S L + E+ G + + ++K +
Sbjct: 136 KRIGLLATRATIHCTYIQDLIECFAADCQIERLWSSELVTLAEKKLHGGSVSVEALRKIL 195
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+PL+ ++ P+ +D+ +IA R LL
Sbjct: 196 TPWL--NMDSPPDTVVLGCTHFPLLAEELAKILPYNTQMVDSGAAIAHRVVWLL 247
>gi|229520053|ref|ZP_04409481.1| glutamate racemase [Vibrio cholerae TM 11079-80]
gi|229342841|gb|EEO07831.1| glutamate racemase [Vibrio cholerae TM 11079-80]
Length = 265
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 133/244 (54%), Gaps = 15/244 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVGTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFL 252
VL CTH+PLI +Q+ V +D+ +IARR + LL + T+Q H ++
Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGVGTNQ-----KHQIYA 236
Query: 253 SGKP 256
S P
Sbjct: 237 SAPP 240
>gi|149912317|ref|ZP_01900882.1| glutamate racemase [Moritella sp. PE36]
gi|149804604|gb|EDM64670.1| glutamate racemase [Moritella sp. PE36]
Length = 262
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 120/226 (53%), Gaps = 3/226 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ ILIFDSG+GG+ + + ++ +P ++Y+ D+ FPYG + L R+ L + +
Sbjct: 2 SKILIFDSGVGGISIYKAIKEQLPNADYLYLFDNKYFPYGELDPEFLIDRVCQLIGYMCE 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L VIACN+A TL+ LR F S+ F+G VPAIK AA ++ I +L+TP T+
Sbjct: 62 NHSPDLVVIACNSASTLVLPALRKRF-SIPFVGVVPAIKPAALQSKKKKIGLLATPGTVS 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT L++ + C I ++ + L + E G + D I + D
Sbjct: 121 REYTQLLVNEHAQDCEIDMIGTTSLVLQAENKLYGHPVDLDAINNVVSKW--SDPQNSPD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
V+VL CTH+PL+V + ++D+ +IA R + +L NT
Sbjct: 179 VVVLGCTHFPLLVTELEASLGEHIQFIDSGMAIALRVKDILGEKNT 224
>gi|153803564|ref|ZP_01958150.1| glutamate racemase [Vibrio cholerae MZO-3]
gi|153831286|ref|ZP_01983953.1| glutamate racemase [Vibrio cholerae 623-39]
gi|229512363|ref|ZP_04401839.1| glutamate racemase [Vibrio cholerae TMA 21]
gi|229527102|ref|ZP_04416496.1| glutamate racemase [Vibrio cholerae 12129(1)]
gi|254292226|ref|ZP_04962991.1| glutamate racemase [Vibrio cholerae AM-19226]
gi|297581776|ref|ZP_06943697.1| glutamate racemase [Vibrio cholerae RC385]
gi|124120901|gb|EAY39644.1| glutamate racemase [Vibrio cholerae MZO-3]
gi|148873230|gb|EDL71365.1| glutamate racemase [Vibrio cholerae 623-39]
gi|150421862|gb|EDN13844.1| glutamate racemase [Vibrio cholerae AM-19226]
gi|229335333|gb|EEO00816.1| glutamate racemase [Vibrio cholerae 12129(1)]
gi|229350618|gb|EEO15562.1| glutamate racemase [Vibrio cholerae TMA 21]
gi|297533870|gb|EFH72710.1| glutamate racemase [Vibrio cholerae RC385]
gi|327483054|gb|AEA77461.1| Glutamate racemase [Vibrio cholerae LMA3894-4]
Length = 265
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 133/244 (54%), Gaps = 15/244 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFL 252
VL CTH+PLI +Q+ V +D+ +IARR + LL + T+Q H ++
Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGVGTNQ-----KHQIYA 236
Query: 253 SGKP 256
S P
Sbjct: 237 SAPP 240
>gi|238754700|ref|ZP_04616052.1| Glutamate racemase [Yersinia ruckeri ATCC 29473]
gi|238707008|gb|EEP99373.1| Glutamate racemase [Yersinia ruckeri ATCC 29473]
Length = 248
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 133/246 (54%), Gaps = 10/246 (4%)
Query: 30 QKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFT 89
Q++R L+P+ H+IY D+V FPYG + + +R++ + + + ++ + VIACNTA T
Sbjct: 3 QEIRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQQHPLAIVVIACNTAST 62
Query: 90 LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCH 149
+ LR F S +G VPAIK AA T++G++ +L+T AT+ R+YT +LI + + C
Sbjct: 63 VSLPALRERF-SFPVVGVVPAIKPAARLTRNGVVGLLATRATVHRSYTLDLIARFATDCK 121
Query: 150 IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209
I L+ S L E G ++ +KK + +E D +VL CTH+PL+
Sbjct: 122 IELLGSSELVELAETKLHGGEVSLSVLKKILNPWLSMREPP--DTVVLGCTHFPLLAEEL 179
Query: 210 RQLSPWPVDWLDNSDSIARRARCLLPR----INTHQTRVFDDHALFLSGKPDIAMRRLMQ 265
Q+ P +D+ +IARR L+ I+T + V + L L D A+ ++Q
Sbjct: 180 AQVLPEGTRMVDSGAAIARRTAWLISSQENVISTQEDNV--AYCLTLDAGTD-ALLPVLQ 236
Query: 266 GFGLKS 271
G+G +
Sbjct: 237 GYGFPT 242
>gi|153217406|ref|ZP_01951157.1| glutamate racemase [Vibrio cholerae 1587]
gi|124113576|gb|EAY32396.1| glutamate racemase [Vibrio cholerae 1587]
Length = 265
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 133/244 (54%), Gaps = 15/244 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFL 252
VL CTH+PLI +Q+ V +D+ +IARR + LL + T+Q H ++
Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGVGTNQ-----KHQIYA 236
Query: 253 SGKP 256
S P
Sbjct: 237 SAPP 240
>gi|84394314|ref|ZP_00993037.1| glutamate racemase [Vibrio splendidus 12B01]
gi|84375044|gb|EAP91968.1| glutamate racemase [Vibrio splendidus 12B01]
Length = 276
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 124/223 (55%), Gaps = 7/223 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
LQ +IL+FDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ + +
Sbjct: 15 LQKNILVFDSGVGGLSVYKEISQLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSIVTSF 74
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + + VIACNTA T++ LR+ S+ +G VPAIK A+ + +++TPAT
Sbjct: 75 VASHAIDIVVIACNTASTIVLPTLRAN-NSIPIVGVVPAIKPASLLANKA-VGLIATPAT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI ++ S + L+ S L E+ G I +E+++ ++
Sbjct: 133 ITREYTHELIKNFSSNKRVELLGSTRLVDMAEDKLRGEAINLEELQQILQPMI-----NT 187
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV VL CTH+PLI +Q+ V +D+ +IA+R + LL
Sbjct: 188 IDVAVLGCTHFPLIKSEIQQVLGKSVLLVDSGKAIAKRVQDLL 230
>gi|15640188|ref|NP_229815.1| glutamate racemase [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591662|ref|ZP_01678900.1| glutamate racemase [Vibrio cholerae 2740-80]
gi|147673599|ref|YP_001218240.1| glutamate racemase [Vibrio cholerae O395]
gi|227080392|ref|YP_002808943.1| glutamate racemase [Vibrio cholerae M66-2]
gi|229508432|ref|ZP_04397936.1| glutamate racemase [Vibrio cholerae BX 330286]
gi|229508887|ref|ZP_04398377.1| glutamate racemase [Vibrio cholerae B33]
gi|229517001|ref|ZP_04406447.1| glutamate racemase [Vibrio cholerae RC9]
gi|229606705|ref|YP_002877353.1| glutamate racemase [Vibrio cholerae MJ-1236]
gi|254851543|ref|ZP_05240893.1| glutamate racemase [Vibrio cholerae MO10]
gi|255743894|ref|ZP_05417849.1| glutamate racemase [Vibrio cholera CIRS 101]
gi|262166982|ref|ZP_06034700.1| glutamate racemase [Vibrio cholerae RC27]
gi|298501081|ref|ZP_07010881.1| glutamate racemase [Vibrio cholerae MAK 757]
gi|11386939|sp|Q9KVI7|MURI_VIBCH RecName: Full=Glutamate racemase
gi|172047523|sp|A5F4P4|MURI_VIBC3 RecName: Full=Glutamate racemase
gi|254766132|sp|C3LPZ8|MURI_VIBCM RecName: Full=Glutamate racemase
gi|9654559|gb|AAF93334.1| glutamate racemase [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121546478|gb|EAX56698.1| glutamate racemase [Vibrio cholerae 2740-80]
gi|146315482|gb|ABQ20021.1| glutamate racemase [Vibrio cholerae O395]
gi|227008280|gb|ACP04492.1| glutamate racemase [Vibrio cholerae M66-2]
gi|227011822|gb|ACP08032.1| glutamate racemase [Vibrio cholerae O395]
gi|229346064|gb|EEO11036.1| glutamate racemase [Vibrio cholerae RC9]
gi|229354004|gb|EEO18937.1| glutamate racemase [Vibrio cholerae B33]
gi|229354705|gb|EEO19627.1| glutamate racemase [Vibrio cholerae BX 330286]
gi|229369360|gb|ACQ59783.1| glutamate racemase [Vibrio cholerae MJ-1236]
gi|254847248|gb|EET25662.1| glutamate racemase [Vibrio cholerae MO10]
gi|255738377|gb|EET93767.1| glutamate racemase [Vibrio cholera CIRS 101]
gi|262024566|gb|EEY43249.1| glutamate racemase [Vibrio cholerae RC27]
gi|297540115|gb|EFH76176.1| glutamate racemase [Vibrio cholerae MAK 757]
Length = 265
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEEL-----ASILQPLKNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 220
>gi|119944401|ref|YP_942081.1| glutamate racemase [Psychromonas ingrahamii 37]
gi|119863005|gb|ABM02482.1| glutamate racemase [Psychromonas ingrahamii 37]
Length = 268
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 141/267 (52%), Gaps = 20/267 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V ++R P Y+ D+ FPYG + L +RLM L S L ++
Sbjct: 6 VLIFDSGVGGLSVFDQVRKQSPGIKCFYLFDNAYFPYGELQADFLIQRLMSLLSSFLGRH 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACN+A T+ LR +F S+ +G VPAIK A T++G+I +L+TPAT+
Sbjct: 66 KIDLIVIACNSASTVALQYLRESF-SIPIVGVVPAIKPATFLTKNGVIGLLATPATINGA 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT+ LI + + + + S L E G I++ +I+ + + D I
Sbjct: 125 YTARLIDEFAADKQVLKIGSTQLVKLAELKLQGKLIQQADIEGVLAAWLMLD--TMPDTI 182
Query: 196 VLACTHYPLI-VHVFRQLSPWPVDWLDNSDSIARRARCLL------PRINTHQ---TRVF 245
VL CTH+PL+ +FR ++ +D+ ++IA+R LL + NTHQ T+V+
Sbjct: 183 VLGCTHFPLLKAEIFRCFKD-KINLVDSGNAIAQRVTQLLGESEMTAKENTHQAYFTKVY 241
Query: 246 D-DHALFLSGKPDIAMRRLMQGFGLKS 271
D + S A++R +G S
Sbjct: 242 QLDESTNFS-----ALQRSFLAYGFNS 263
>gi|157377467|ref|YP_001476067.1| glutamate racemase [Shewanella sediminis HAW-EB3]
gi|157319841|gb|ABV38939.1| Glutamate racemase [Shewanella sediminis HAW-EB3]
Length = 282
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 118/220 (53%), Gaps = 5/220 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ L IL+FDSGIGGL + ++R ++P+ + Y+ D+ PYG ++ L L +
Sbjct: 7 RDLSGPILVFDSGIGGLSIFDEIRQVLPDKQYCYLFDNARLPYGELDEQVLISGCKALIT 66
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I+ L VIACNTA TL+ LR ++ +G VPAIK AAA +++ I +L+TP
Sbjct: 67 SIVKMIDASLIVIACNTASTLVLPALREVL-NIPVVGVVPAIKPAAALSRNKHIGVLATP 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+RR YT LI + C + L S L E A GI I + +I K + I+ G
Sbjct: 126 GTIRRPYTHELIEQFGGDCKVELYGSSELVILSERKAAGIDIIQADIAKILNP--IKCSG 183
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D +VL CTH+P++ + V LD++ ++A R
Sbjct: 184 --LDTLVLGCTHFPMLKVEIQDYLGENVLLLDSAKAVAAR 221
>gi|262163706|ref|ZP_06031447.1| glutamate racemase [Vibrio mimicus VM223]
gi|262027922|gb|EEY46586.1| glutamate racemase [Vibrio mimicus VM223]
Length = 265
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V Q++ +P+ +IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYQEIEARLPQLSYIYLFDNAAYPYGELAQETLIARVNTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E++ + DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELE-----SILHPLKHTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 220
>gi|91791601|ref|YP_561252.1| glutamate racemase [Shewanella denitrificans OS217]
gi|123357218|sp|Q12SP7|MURI_SHEDO RecName: Full=Glutamate racemase
gi|91713603|gb|ABE53529.1| glutamate racemase [Shewanella denitrificans OS217]
Length = 277
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 5/223 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P ++ Y+ D+ PYG+ + L + + L
Sbjct: 1 MSGPILVFDSGIGGLSVLAEIRKRLPAENYCYLFDNARLPYGDLSESELIRGCVELICQQ 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + + + V+ACNTA TL+ LR ++ +G VPAIK AA ++ I +L+TP T
Sbjct: 61 VQQVEAKIVVVACNTASTLVLPVLRQRL-TIPVVGVVPAIKPAALLSKRKHIGVLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + C + L S L E+ A + + ++ K + +
Sbjct: 120 VSRDYTHGLISQFAEDCQVDLFGSSELVMLAEQKAAKLPVNNQQLAK----ILAPIKASK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV+VL CTH+P+I Q V LD+ ++IA R LL
Sbjct: 176 LDVLVLGCTHFPMIKEELSQYLGESVLLLDSGEAIANRVASLL 218
>gi|284009189|emb|CBA76250.1| glutamate racemase [Arsenophonus nasoniae]
Length = 279
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 6/231 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + +ILIFDSG+GGL V +++R L+P+ H+IY D+ FPYG + +R++
Sbjct: 14 KTARPTILIFDSGVGGLSVYREVRQLLPDLHYIYAFDNDAFPYGEKSAEFIIERIIRFID 73
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I K+ +++IACNTA T+ LR+ F +G VPAIK A T++G+I +L+T
Sbjct: 74 QIQQKHALAIAIIACNTASTVSLPILRAHF-QFPIIGVVPAIKPATKLTRNGIIGLLATK 132
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ YT LI + C + +++S L E+ G I + + + ++ KE
Sbjct: 133 ATVSGNYTRELIDRFAVDCKVEMIASSELVELAEKKLHGQIISTETLVRIVKPWLKMKEP 192
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
D IVL CTH+PL+ +++ +D+ +IARRA L IN H
Sbjct: 193 P--DTIVLGCTHFPLLSAELKEVLFDGTRLIDSGAAIARRAVWL---INNH 238
>gi|258626053|ref|ZP_05720908.1| glutamate racemase [Vibrio mimicus VM603]
gi|258581673|gb|EEW06567.1| glutamate racemase [Vibrio mimicus VM603]
Length = 265
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDALVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E++ + DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELEN-----ILHPLKHTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 220
>gi|323144068|ref|ZP_08078711.1| glutamate racemase [Succinatimonas hippei YIT 12066]
gi|322416144|gb|EFY06835.1| glutamate racemase [Succinatimonas hippei YIT 12066]
Length = 267
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 118/219 (53%), Gaps = 2/219 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L FDSG+GG V ++ L P + Y+ D+ FPYGN ++ + KR + + + ++
Sbjct: 4 VLFFDSGLGGTSVFSAVKELNPNCSYYYLFDNECFPYGNKDEAFIIKRTDEILEESVRRF 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L ++ACNTA T+ +LR + +G VPAIK AA ++S +I +++TP T+RR
Sbjct: 64 SVSLIIVACNTASTVALPKLRDRI-KIPIVGVVPAIKPAAIKSKSKIIGLVATPGTIRRA 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT++LI + C + + + L E G + E+ + + K +R D I
Sbjct: 123 YTNDLIEKFAKDCKVLKIGTTDLVRLCERKMAGKPVTLTEVAEVFGPWLMLKPEERPDSI 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PL+ L P V +D+ ++I RR R L+
Sbjct: 183 VLGCTHFPLVKDEIGTLFPDAV-LVDSGEAIGRRVRSLI 220
>gi|323498757|ref|ZP_08103744.1| glutamate racemase [Vibrio sinaloensis DSM 21326]
gi|323316185|gb|EGA69209.1| glutamate racemase [Vibrio sinaloensis DSM 21326]
Length = 262
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 120/222 (54%), Gaps = 7/222 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q ++LIFDSG+GGL V +++ ++P+ ++ Y+ D+ +PYG E L R+ L ++
Sbjct: 4 QANVLIFDSGVGGLSVYEEIARILPQLNYTYIFDNEAYPYGELEHDTLIHRVDALIGSLV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + L VIACNTA T++ LR P + +G VPAIK A+ + +++TPAT+
Sbjct: 64 KEQEIDLVVIACNTASTIVLPTLRQRLP-IPIVGVVPAIKPASNMANIA-VGLIATPATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT +LI S+ + L+ S L EE G + E+ + +
Sbjct: 122 TRQYTHDLIRSFSQSKPVELLGSTRLVDMAEEKLRGKALDLQELSQ-----ILAPISGHI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 177 DVAVLGCTHFPLIKQEIQQVLGSSVLLVDSGKAIARRVQALL 218
>gi|296283687|ref|ZP_06861685.1| glutamate racemase [Citromicrobium bathyomarinum JL354]
Length = 264
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 114/214 (53%), Gaps = 1/214 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
ILIFDSG+GGL +L ++R +P+ IY AD G PYG + + R+ L + ++Y
Sbjct: 7 ILIFDSGVGGLTILAELRKTLPQAPVIYAADFAGLPYGTKSEAEVAARVCGLLGRMAERY 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
QP L IACNTA T+ +R + +G VPAIK AA TQ+G+I +L T AT+R+
Sbjct: 67 QPRLICIACNTASTIALSMVRDVL-EVPIVGTVPAIKPAALATQTGVIGLLGTGATVRQP 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y L + + + +S L E G + E + + + G + + + D +
Sbjct: 126 YVDRLEAEFAADKRLIRHASDALVPLAEAKMRGETLAEGAVAEAVAGLRDDPQAQDLDTL 185
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VLACTH+PL+ R + + +D + IARR
Sbjct: 186 VLACTHFPLLADELRAVFGQDIQLVDGAQGIARR 219
>gi|323495305|ref|ZP_08100385.1| glutamate racemase [Vibrio brasiliensis LMG 20546]
gi|323310440|gb|EGA63624.1| glutamate racemase [Vibrio brasiliensis LMG 20546]
Length = 264
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 122/219 (55%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
ILIFDSG+GGL V ++++ +P+ ++Y+ D+ +PYG + L R+ + S ++ ++
Sbjct: 8 ILIFDSGVGGLSVYKEIQAQLPQLDYLYIFDNEAYPYGELDHDTLIARVDTIVSSLVAQH 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q L VIACNTA T++ LR+ S+ +G VPAIK A+ + +++TPAT+ R
Sbjct: 68 QIDLVVIACNTASTIVLPTLRAKL-SVPVVGVVPAIKPASNLANKA-VGLIATPATITRP 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI + + L+ S L EE G + +E+K + + DV
Sbjct: 126 YTHDLIRDFSQSKPVELLGSTRLVDIAEEKLRGKAVDLEELKN-----ILAPMESKIDVA 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PLI + + V +D+ ++IARR + LL
Sbjct: 181 VLGCTHFPLIREEIQAVLTNHVQLVDSGEAIARRVKDLL 219
>gi|308047962|ref|YP_003911528.1| glutamate racemase [Ferrimonas balearica DSM 9799]
gi|307630152|gb|ADN74454.1| glutamate racemase [Ferrimonas balearica DSM 9799]
Length = 258
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 120/221 (54%), Gaps = 5/221 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL + Q +R +P + Y+AD+ FPYG L + + L +
Sbjct: 2 GAILLFDSGLGGLTIYQHIRQALPNRRYRYLADNARFPYGELAPDELVQGCVDLIRAQMA 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACN+A TL+ + LR+ +G VPAIK AAA + +I +L+TP T+R
Sbjct: 62 EEPIDLVVIACNSASTLVLEPLRAAI-DCPVVGVVPAIKPAAAMSHRKVIGLLATPGTVR 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT L + + C + + S L E+ G + +++ I G F++++ D
Sbjct: 121 RPYTDELAAQFAADCELVRLGSSELVWLAEQKLAGQPVSCSQLEP-ILGEFLQRQ---PD 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
V+VL CTH+PL+ Q+ V +D+ +IARR LL
Sbjct: 177 VVVLGCTHFPLLREEIGQVLGPQVRLIDSGAAIARRVSQLL 217
>gi|258622814|ref|ZP_05717831.1| glutamate racemase [Vibrio mimicus VM573]
gi|258584875|gb|EEW09607.1| glutamate racemase [Vibrio mimicus VM573]
Length = 265
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 123/219 (56%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E++ + DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELEN-----ILHPLKHAIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 220
>gi|157959995|ref|YP_001500029.1| glutamate racemase [Shewanella pealeana ATCC 700345]
gi|189030371|sp|A8GYV7|MURI_SHEPA RecName: Full=Glutamate racemase
gi|157844995|gb|ABV85494.1| glutamate racemase [Shewanella pealeana ATCC 700345]
Length = 268
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 116/219 (52%), Gaps = 5/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
ILIFDSGIGGL + ++R ++P+ Y+ D+ PYG E+ L K + L + K
Sbjct: 5 ILIFDSGIGGLSIFDEIRKVLPDQDCCYLFDNARLPYGELEESVLIKGCVELICEQALKI 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACN+A TL+ LR S+ +G VPAIK AA + + I +L+TP T++R+
Sbjct: 65 DASLVVVACNSASTLVLPGLRERL-SIPIVGVVPAIKPAAKLSIARHIGLLATPGTIKRS 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + C + L S L E G + +++ ++E + D +
Sbjct: 124 YTRELIEQFADGCKVELFGSSELVMLAEAKLAGESVDLIKLRAQLE----PIRQSKLDTL 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+P+I +Q+ V LD+ +IA+R LL
Sbjct: 180 VLGCTHFPIIASEMQQILGNGVKLLDSGVAIAQRVVFLL 218
>gi|262172913|ref|ZP_06040591.1| glutamate racemase [Vibrio mimicus MB-451]
gi|261893989|gb|EEY39975.1| glutamate racemase [Vibrio mimicus MB-451]
Length = 265
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 123/219 (56%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E++ + DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELEN-----ILHPLKHTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 220
>gi|88861400|ref|ZP_01136029.1| glutamate racemase [Pseudoalteromonas tunicata D2]
gi|88816575|gb|EAR26401.1| glutamate racemase [Pseudoalteromonas tunicata D2]
Length = 269
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 124/224 (55%), Gaps = 5/224 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
LQ I++FDSGIGG VL+ ++ P + Y+ D++ PYGN L++RL+ +
Sbjct: 4 LQPHIVVFDSGIGGTTVLEHIQAAYPFAQYSYLMDNLFMPYGNLTIEVLQQRLLAKLKTV 63
Query: 72 LDKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+++ + + VIACNTA T D LRS + + +G VPAIK A + +G + +L+TP
Sbjct: 64 QEQFVKIDIIVIACNTASTQTLDFLRS-YTDIPIVGVVPAIKPACLQSSTGSVGLLATPG 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ YT +LI+++ + +HL S L S E+ + D++ +E+E IE+
Sbjct: 123 TIKNVYTQSLINAHSNNVKVHLYGSTRLVSLAEDKFWFGVVSIDDVAEELERLKIEQS-- 180
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTH+P + QL + +D+ +IA R LL
Sbjct: 181 -IDHLILGCTHFPFLKSELAQLLSPSMKIIDSGAAIANRVSFLL 223
>gi|312884421|ref|ZP_07744126.1| glutamate racemase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367943|gb|EFP95490.1| glutamate racemase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 274
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 114/222 (51%), Gaps = 7/222 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q ILIFDSG+GGL V +++ +P ++ Y+ D+ +PYG E L R+ L +
Sbjct: 15 QTKILIFDSGVGGLSVFKEIEAKLPALNYFYIFDNAAYPYGELEHETLTARVETLVCQYV 74
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K L VIACNTA T++ LR+ S+ +G VPAIK A+ I +++TPAT+
Sbjct: 75 KKLDIDLVVIACNTASTIVLPMLRARL-SIPVVGVVPAIKPASNLANKA-IGLIATPATI 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI+ + I ++ S L EE G I E++ +
Sbjct: 133 TRQYTRELINDFSQSKPIKMIGSTRLVDMAEEKLRGAAIDLKELEH-----ILGPMKNNI 187
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV VL CTH+PLI + + + V +D+ +IARR LL
Sbjct: 188 DVAVLGCTHFPLIKNEIQSVLGSEVLLIDSGVAIARRVESLL 229
>gi|260767618|ref|ZP_05876554.1| glutamate racemase [Vibrio furnissii CIP 102972]
gi|260617518|gb|EEX42701.1| glutamate racemase [Vibrio furnissii CIP 102972]
gi|315178791|gb|ADT85705.1| glutamate racemase [Vibrio furnissii NCTC 11218]
Length = 267
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 130/244 (53%), Gaps = 8/244 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q LIFDSG+GGL V ++++ +P+ + Y+ D+ +PYG L +R+ L ++++
Sbjct: 6 QYKALIFDSGVGGLSVYREIQTRLPQVSYTYLFDNAAYPYGELAQETLLQRVDMLVTNLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA T++ LR+ ++ +G VPAIK A+ + +++TPAT+
Sbjct: 66 AQQGFDIVVIACNTASTIVLPRLRAKL-AIPVVGVVPAIKPASMLAHKA-VGLIATPATI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT +LI + S ++ L+ S L EE G + +E+ + +
Sbjct: 124 TRQYTHDLIRDFSSDKNVELLGSTRLVDMAEEKLRGKAVDLEEL-----ASILSPLRQHI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI + + V +D+ ++IARR + LL + T + H++F
Sbjct: 179 DVAVLGCTHFPLIKEEIQAVLGKDVMLVDSGEAIARRVQDLL-HLETGSMQDEHPHSIFS 237
Query: 253 SGKP 256
S P
Sbjct: 238 SAPP 241
>gi|15602782|ref|NP_245854.1| glutamate racemase [Pasteurella multocida subsp. multocida str.
Pm70]
gi|13431696|sp|P57887|MURI_PASMU RecName: Full=Glutamate racemase
gi|12721236|gb|AAK03001.1| MurI [Pasteurella multocida subsp. multocida str. Pm70]
Length = 269
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 129/249 (51%), Gaps = 14/249 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +IL FDSG+GG V ++ + L+P+ H++Y D+ FPY + + +R + + I
Sbjct: 6 QPTILFFDSGMGGFSVYKETKQLLPDCHYLYCFDNAFFPYSEKSEEEIIQRTLKICQKID 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA T++ LR+ F ++ +G VPAIK AA +++ I +L+T T+
Sbjct: 66 RTFPLDLIVIACNTASTVVLPALRAHF-AIPVVGTVPAIKPAAECSETKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R Y ++LI Y C + + S L E+ G + +K+E+ + +
Sbjct: 125 KRAYVADLIAQYARDCTVEKLGSTKLVEIAEQKLHGKAVDLHALKQELAPW---QSIQNL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ----------T 242
D +VL CTH+PLI + P ++D+ +IA R + LL +I+ T
Sbjct: 182 DTVVLGCTHFPLIKEEIKWCLPQVRFFVDSGKAIALRVKTLLSKIDIQSKTNEKNLIFCT 241
Query: 243 RVFDDHALF 251
+ F+D F
Sbjct: 242 QFFEDETQF 250
>gi|91228520|ref|ZP_01262441.1| glutamate racemase [Vibrio alginolyticus 12G01]
gi|91187896|gb|EAS74207.1| glutamate racemase [Vibrio alginolyticus 12G01]
Length = 204
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 7/193 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLVSRVNQLVSSLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+ K + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGNSVSLDELTK-----ILLPLRDKV 178
Query: 193 DVIVLACTHYPLI 205
DV VL CTH+PLI
Sbjct: 179 DVAVLGCTHFPLI 191
>gi|120555141|ref|YP_959492.1| glutamate racemase [Marinobacter aquaeolei VT8]
gi|120324990|gb|ABM19305.1| glutamate racemase [Marinobacter aquaeolei VT8]
Length = 281
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 121/214 (56%), Gaps = 5/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V + +P +Y+AD+ GFPYG+ + + +R L L ++
Sbjct: 8 VLVFDSGVGGLSVAACIHQTLPGAELVYLADNAGFPYGDKPEQVVIERCCTLIRQCLAQF 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA T++ ELR+ ++ +G VPA+K AAA + + I +L+TPAT++R
Sbjct: 68 PCDVVVVACNTASTVVLPELRANI-AVPVVGVVPAVKPAAACSVNRRIGLLATPATVKRA 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y +LI + C + + L EE G D++ E++G + D +
Sbjct: 127 YLDDLIQKFARDCEVVRLGHPALVRWAEELVGG--SAPDQV--EVDGAMVPLREAGVDTV 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VL CTHYPL++ R+ P + W+++ ++IARR
Sbjct: 183 VLGCTHYPLLLPWLRKALPEVMHWVESGEAIARR 216
>gi|212633112|ref|YP_002309637.1| glutamate racemase [Shewanella piezotolerans WP3]
gi|226722989|sp|B8CH57|MURI_SHEPW RecName: Full=Glutamate racemase
gi|212554596|gb|ACJ27050.1| Glutamate racemase [Shewanella piezotolerans WP3]
Length = 268
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 130/265 (49%), Gaps = 18/265 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSGIGGL +L ++R +MP+ Y+ D+ PYG E+ L + L +
Sbjct: 1 MSGPILIFDSGIGGLSILDEIRKVMPQQSCCYLFDNARLPYGELEESELISGCVSLIIEQ 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACN+A TL+ LR S+ +G VPAIK AA ++ I +L+TP T
Sbjct: 61 AMRINAGIVVVACNSASTLVLTTLREQL-SIPVVGVVPAIKPAAKISKRRHIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI ++ C + L S L E G + +++E
Sbjct: 120 IKRPYTKQLIDAFAEDCRVELFGSSELVMLAEAKLAGTAVD----MQKLELLLAPIRTSE 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-----LPRINTHQTRVFD 246
D +VL CTH+P++ +Q + LD+ ++A R L LP+ T +V D
Sbjct: 176 LDTLVLGCTHFPVLATEIKQSLGQSIILLDSGKAVADRVLSLLKGNGLPK--TASNKVVD 233
Query: 247 DHALFLSGKPDIAM----RRLMQGF 267
A+F + DIA R + +GF
Sbjct: 234 YSAVFTTD--DIAQGLKKRLVEEGF 256
>gi|261249246|emb|CBG27108.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
Length = 250
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 3/207 (1%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y L+VIACNTA
Sbjct: 3 VYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYPLSLAVIACNTA 62
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
T+ LR F + +G VPAIK AA T +G++ +L+T AT++R YT LI + ++
Sbjct: 63 STVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPYTHELIARFANE 121
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
C I ++ S L E G + +E+++ + E D +VL CTH+PL+
Sbjct: 122 CQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFPLLRD 179
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLL 234
Q+ P +D+ +IARR LL
Sbjct: 180 ELLQVLPEGTRLVDSGAAIARRTAWLL 206
>gi|33152892|ref|NP_874245.1| glutamate racemase [Haemophilus ducreyi 35000HP]
gi|71151975|sp|Q7VKJ3|MURI_HAEDU RecName: Full=Glutamate racemase
gi|33149117|gb|AAP96634.1| glutamate racemase [Haemophilus ducreyi 35000HP]
Length = 265
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 8/225 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL V ++R +P H++Y D+ FPY L +R + +
Sbjct: 1 MKPTILLYDSGMGGLTVYDEIRKKLPNAHYLYYFDNACFPYSEKPTEVLVERATKMVQKM 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L V+ACNTA T++ LR FP +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AKNYPLDLVVVACNTASTVVLPTLRKIFP-FPIVGTVPAIKPAAALSQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGK 190
+ R Y +LI Y C I + S L VE+ K++ I + + +
Sbjct: 120 ITRPYVLSLIEQYAPNCQIEKIGSTALVELVEQ-----KLQTGVIDLTRLTPIIADWQNH 174
Query: 191 RT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
T D ++L CTH+P+ +QL P +LD+ ++IA R L+
Sbjct: 175 PTLDTVILGCTHFPMAKTELQQLLPNVKYFLDSGNAIANRVTHLI 219
>gi|311693694|gb|ADP96567.1| glutamate racemase [marine bacterium HP15]
Length = 277
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 13/262 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + +P +Y+AD+ GFPYG + + R L + L+ Y
Sbjct: 1 MFDSGVGGLSVAACIHRQLPGLEIVYLADNAGFPYGEKSEAVVIDRCCSLITRALELYPS 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA T++ LR+ ++ +G VPAIK AAA + + + +L+TPAT+RR Y
Sbjct: 61 DAIVVACNTASTVVLPHLRA-MTAVPVVGVVPAIKPAAAKSVNRRMGLLATPATVRRPYL 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ + C I + L E+ GI++ E+ + + F E D +VL
Sbjct: 120 DRLVEEFAGDCRIERIGHPGLVRWAEDLVSGIEVPLAELSEAMR-PFKEAG---VDTVVL 175
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDD-----HA 249
CTHYPL++ R P W+D+ ++IARR LL R++ Q V A
Sbjct: 176 GCTHYPLLLESLRASLPTVRFWVDSGEAIARRVAWLLEQTGRLDVAQGPVASAGKQPVSA 235
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
SG + M G GL++
Sbjct: 236 ALFSGPAPKGIAPFMAGLGLEA 257
>gi|127511073|ref|YP_001092270.1| glutamate racemase [Shewanella loihica PV-4]
gi|166231053|sp|A3Q963|MURI_SHELP RecName: Full=Glutamate racemase
gi|126636368|gb|ABO22011.1| glutamate racemase [Shewanella loihica PV-4]
Length = 266
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 132/261 (50%), Gaps = 9/261 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +IL+FDSG+GGL +L +R +P ++ Y+ D+ PYG ++ L + + L S
Sbjct: 1 MSANILVFDSGVGGLSILAAVREQLPSANYCYLFDNARLPYGELDEQELIQGCVTLISQA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + Q + V+ACN+A TLI LR+ + +G VPAIK AAA +Q + +L+TP T
Sbjct: 61 VIQCQADIVVVACNSASTLILPALRACL-KVPVVGVVPAIKPAAALSQKKHLGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-IEGCFIEKEGK 190
+ R YT +LI + S C + S L E+ K+ + + E + +
Sbjct: 120 VNRQYTQDLIDQFASDCRVDRFGSSELVYLAED-----KMAQRPVDSEALHRILAPIKAS 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTH+P++ + V LD+S++IA R LL + + AL
Sbjct: 175 GLDTLILGCTHFPILREELQSYLGEGVHLLDSSNAIAARVVSLLE--PSMSGEIGKSQAL 232
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
+ + +R+ + +G +S
Sbjct: 233 YTTDSICEGLRKTLAAWGFRS 253
>gi|320159866|ref|YP_004173090.1| glutamate racemase [Anaerolinea thermophila UNI-1]
gi|319993719|dbj|BAJ62490.1| glutamate racemase [Anaerolinea thermophila UNI-1]
Length = 273
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 16/253 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R LMP IY+AD PYG ++ + ++ +
Sbjct: 2 IGVFDSGVGGLSVLRAIRALMPAEPVIYLADQAHVPYGPRPLEEVRGFSQSIARFLIAQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ V+ACNTA LR TFP F+G PA+K AA TQSG++ +L+TPAT +
Sbjct: 62 ARVI-VVACNTASAAALFHLRQTFPETPFVGMEPAVKPAAETTQSGVVGVLATPATFQGA 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
++++ + + + L ++E + +E ++ +E + + D +
Sbjct: 121 LYASVVERFAQGVTLLQDTCAGLVQQIEAG----NLAGEETRRILENALLPMLARGMDTV 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
V+ CTHYP ++ + +Q+ V +D + ++AR+ R RV + H + G
Sbjct: 177 VMGCTHYPFVIPLIQQIVGEQVRVIDPAPAVARQTR-----------RVLEAHGWLVEGN 225
Query: 256 PDIAMRRLMQGFG 268
+R L G G
Sbjct: 226 QPAPVRFLTTGDG 238
>gi|332159762|ref|YP_004296339.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|318603894|emb|CBY25392.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica Y11]
gi|325663992|gb|ADZ40636.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 240
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 12/241 (4%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MP+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L
Sbjct: 1 MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 60
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S
Sbjct: 61 RERF-TFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTQDLIERFATDCKIELLGS 119
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + ++ +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 120 SELVELAETKLHGGVVPKEALKKILHPWLAMREPP--DTIVLGCTHFPLLTEELAQVLPE 177
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDD-----HALFLSGKPDIAMRRLMQGFGLK 270
+D+ +IARR L I++ + + D + + L+ D A+ ++QG+G
Sbjct: 178 GTRMVDSGAAIARRTAWL---ISSQENMISSDEENIAYCMALNADTD-ALLPVLQGYGFP 233
Query: 271 S 271
S
Sbjct: 234 S 234
>gi|52425789|ref|YP_088926.1| glutamate racemase [Mannheimia succiniciproducens MBEL55E]
gi|52307841|gb|AAU38341.1| MurI protein [Mannheimia succiniciproducens MBEL55E]
Length = 271
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 128/243 (52%), Gaps = 5/243 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+++ +IL FDSG+GG V ++++ L+P H++Y D+ FPY + + +R + +
Sbjct: 6 EIKPTILFFDSGVGGFSVYKEVKQLLPNAHYLYCFDNAFFPYSEKSEEVIIERTLTVCKK 65
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
I ++Y VIACNTA T++ LR F ++ +G VPAIK AA +Q+ I +L+T
Sbjct: 66 INEQYPLDAIVIACNTASTVVLPTLRQHF-AIPIIGTVPAIKPAAEKSQTKHIGLLATKG 124
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++RTY ++LI Y C + + S LA E G + ++ E+ +
Sbjct: 125 TVKRTYVTSLIERYAQDCIVEKIGSTKLAEIAERKLHGESVDLIALRNELTPWI---QLS 181
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTH+PLI + P + + +IA+R LL I T + + D+ +
Sbjct: 182 DLDSVILGCTHFPLIKEEIQLCLPQVKFYFEPGTAIAKRVFDLLAGI-TPKDKTETDNCI 240
Query: 251 FLS 253
F +
Sbjct: 241 FYT 243
>gi|145633451|ref|ZP_01789181.1| glutamate racemase [Haemophilus influenzae 3655]
gi|229845418|ref|ZP_04465548.1| glutamate racemase [Haemophilus influenzae 6P18H1]
gi|144986014|gb|EDJ92616.1| glutamate racemase [Haemophilus influenzae 3655]
gi|229811614|gb|EEP47313.1| glutamate racemase [Haemophilus influenzae 6P18H1]
Length = 269
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKSASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYVDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGTAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|167855237|ref|ZP_02478006.1| glutamate racemase [Haemophilus parasuis 29755]
gi|167853601|gb|EDS24846.1| glutamate racemase [Haemophilus parasuis 29755]
Length = 256
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 8/251 (3%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL + +R +P+ H++Y D+ FPY + L +R + + I + Y + V+
Sbjct: 1 MGGLTIYDAIRENLPDAHYLYCFDNAYFPYSEKSEAVLIERAVGIVQKIAENYPLDMVVV 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA T++ LR F +M +G VPAIK AA +Q+ I +L+T T+ R Y LI
Sbjct: 61 ACNTASTVVLPALRERF-AMPIVGTVPAIKPAAQISQTKTIGLLATKGTVTRPYVDELIE 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DVIVLACTH 201
Y C + + S L VEE + ++K + E + T D ++L CTH
Sbjct: 120 RYAKDCVVERIGSTDLVEIVEEKQQTGSVDMQRLQKVV----AEWQSHPTLDTVILGCTH 175
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMR 261
+PL+ +QL P ++D+ + IA R LL + + ++ F + + ++
Sbjct: 176 FPLVKEELQQLLPRVSFFVDSGNRIANRVVSLLQDVKRNVNNENKENQAFCTQNSEDFLK 235
Query: 262 R--LMQGFGLK 270
R +MQ +G K
Sbjct: 236 REKVMQNWGFK 246
>gi|77359223|ref|YP_338798.1| glutamate racemase [Pseudoalteromonas haloplanktis TAC125]
gi|76874134|emb|CAI85355.1| glutamate racemase [Pseudoalteromonas haloplanktis TAC125]
Length = 265
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 119/232 (51%), Gaps = 5/232 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I++FDSGIGG VL+ ++ +P+ + Y D+ PYG + RL L I +
Sbjct: 5 IMVFDSGIGGTTVLEHIQQSIPDAQYSYFMDNALLPYGAQSQQTIINRLCALIHFINQQA 64
Query: 76 QPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V L VIACNTA T +R ++ +G VPAIK AA TQS I +L+TPAT+
Sbjct: 65 LNVDLIVIACNTASTSALGAVRQ-ITTIPIVGVVPAIKPAAQLTQSKHIGLLATPATISS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + + + L SS+ L + E + ++ +E++ I++ DV
Sbjct: 124 PYTRTLIQEHTNNIAVSLYSSVELVTLAERLFFEQSLDTTKLHQELDRLNIDQS---IDV 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VL CTH+P++ Q V LD+ +IA+R L+ ++N + D
Sbjct: 181 LVLGCTHFPILAEPISQYFNRKVQLLDSGAAIAKRVHYLISQLNLTNNNIAD 232
>gi|68250338|ref|YP_249450.1| glutamate racemase [Haemophilus influenzae 86-028NP]
gi|81335242|sp|Q4QJK7|MURI_HAEI8 RecName: Full=Glutamate racemase
gi|68058537|gb|AAX88790.1| glutamate racemase [Haemophilus influenzae 86-028NP]
Length = 269
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-EIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGMAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|145641879|ref|ZP_01797454.1| glutamate racemase [Haemophilus influenzae R3021]
gi|145273501|gb|EDK13372.1| glutamate racemase [Haemophilus influenzae 22.4-21]
Length = 269
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKSASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYVDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|149192517|ref|ZP_01870697.1| glutamate racemase [Vibrio shilonii AK1]
gi|148833649|gb|EDL50706.1| glutamate racemase [Vibrio shilonii AK1]
Length = 266
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 124/223 (55%), Gaps = 9/223 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +ILIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R L ++
Sbjct: 3 RKNILIFDSGVGGLSVFKEIVQRLPQENYIYLFDNEAYPYGELAPETLVNRTCTLIQQMM 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA T++ LR + +G VPAIK A+ +++ + +++TPAT+
Sbjct: 63 RRKAVDIVVIACNTASTIVLPHLRKRI-DIPVVGVVPAIKPASLLSKTA-VGLIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKR 191
R YT +LI ++ + + L+ L E+ K++ +++ +E+E +GK
Sbjct: 121 TRQYTHDLIRNFATDKEVKLIGDSRLVEMAEQ-----KLRNEQVDLQELELILSPIKGK- 174
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV VL CTH+PLI + V+ +D+ +IARR LL
Sbjct: 175 IDVAVLGCTHFPLIKEEIALVLGDCVELVDSGAAIARRVESLL 217
>gi|145630715|ref|ZP_01786494.1| glutamate racemase [Haemophilus influenzae R3021]
gi|144983841|gb|EDJ91291.1| glutamate racemase [Haemophilus influenzae R3021]
Length = 269
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSECEEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|119472793|ref|ZP_01614730.1| glutamate racemase [Alteromonadales bacterium TW-7]
gi|119444752|gb|EAW26057.1| glutamate racemase [Alteromonadales bacterium TW-7]
Length = 261
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 5/219 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI-LDKY 75
++FDSGIGG VL ++ +P + Y D+ PYG + RL L I L+K
Sbjct: 1 MVFDSGIGGTTVLDHIKQRIPNAQYSYFMDNAFLPYGAQTQQTIINRLCSLIHFIKLNKL 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA T +R + +G VPAIK AA T+S I++L+TPAT+ +
Sbjct: 61 NVDLIVIACNTASTSALSAVRK-ITDIPIVGVVPAIKPAAELTRSNHIALLATPATIASS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT+ LI + S ++L SS+ L + E + +++ +EG IEK+ TDV+
Sbjct: 120 YTNKLIAQHASNVTVNLYSSVELVNLAELLFFNGYLDTNKLHAVLEGLNIEKQ---TDVL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+P++ + + +D+ +IA R LL
Sbjct: 177 VLGCTHFPILTKQISEHFKNSIQLVDSGAAIANRVIYLL 215
>gi|148655659|ref|YP_001275864.1| glutamate racemase [Roseiflexus sp. RS-1]
gi|189030367|sp|A5UTG1|MURI_ROSS1 RecName: Full=Glutamate racemase
gi|148567769|gb|ABQ89914.1| glutamate racemase [Roseiflexus sp. RS-1]
Length = 272
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 11/230 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG+ VL+++R L+P + +Y+AD PYG+ L+ + ++ +
Sbjct: 9 IGLFDSGIGGMTVLREVRRLLPGENLLYLADQARCPYGSRSPDELRAIAAACAAWLIARG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +LR FP++ F+G VP +K AA+ T+SG++ +L+TPATL
Sbjct: 69 AK-LVVVACNTASAAALADLRRRFPAIPFVGMVPPVKPAASRTRSGVVGVLATPATLAGD 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
++I + H+ + L ++EE A + E + G D I
Sbjct: 128 LLHDVISRWAEGVHVIEQACPGLVEQIEEGA----LDSPETMALLRGYVTPLLDAGADTI 183
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA------RCLLPRINT 239
VL CTHYPL+V R ++ LD + ++A+R R L+ +NT
Sbjct: 184 VLGCTHYPLLVPQLRAIAGDDTLILDAAPAVAQRVAQIVQERGLMRNVNT 233
>gi|238794886|ref|ZP_04638485.1| Glutamate racemase [Yersinia intermedia ATCC 29909]
gi|238725761|gb|EEQ17316.1| Glutamate racemase [Yersinia intermedia ATCC 29909]
Length = 241
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 109/200 (54%), Gaps = 3/200 (1%)
Query: 35 LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94
++P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T++
Sbjct: 1 MLPDLHYIYAFDNVAFPYGEKSGEFIIERVLEIVTAVQQRHPLAIVVIACNTASTVVLPA 60
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
LR F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+
Sbjct: 61 LRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTRDLIERFATDCKIELLG 119
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
S L E G + + +KK + +E D IVL CTH+PL+V Q+ P
Sbjct: 120 SSELVELAESKLHGGAVPIETLKKILHPWLAMREPP--DTIVLGCTHFPLLVEELAQVLP 177
Query: 215 WPVDWLDNSDSIARRARCLL 234
+D+ +IARR L+
Sbjct: 178 EGTRMVDSGAAIARRTAWLI 197
>gi|260580700|ref|ZP_05848527.1| glutamate racemase [Haemophilus influenzae RdAW]
gi|260092762|gb|EEW76698.1| glutamate racemase [Haemophilus influenzae RdAW]
Length = 269
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGMAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|148827156|ref|YP_001291909.1| glutamate racemase [Haemophilus influenzae PittGG]
gi|166231038|sp|A5UFH0|MURI_HAEIG RecName: Full=Glutamate racemase
gi|148718398|gb|ABQ99525.1| glutamate racemase [Haemophilus influenzae PittGG]
Length = 269
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGMAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|222837977|gb|EEE76342.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 120/237 (50%), Gaps = 13/237 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA-LKKRLMFLFSDIL 72
+ I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ A +++R + +
Sbjct: 312 SPIGVFDSGIGGLSVLQALRHELPHERFVYLADSGNAPYGDARGDAFVQQRTRTIARHLR 371
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA D LR+ P + +G PAIK A+ +Q+G + +++T T+
Sbjct: 372 EQHQIKVLVIACNTATAAAVDMLRAEMPELPLIGVEPAIKPASLSSQTGHVGVMATRGTV 431
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182
+ L+ + + H+ LA +EE + + D + E+ G
Sbjct: 432 SSARFARLVAEHGQRVQFHVQPCDGLAKAIEE-STEQPVPADPMATEVAQLCARYVNALG 490
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
F +K G+ D +VL CTHY R L + ++D +AR+ R +L R+ T
Sbjct: 491 SFGQKTGE-MDSLVLGCTHYIFAREQLRTLLGPDIQFIDTGAPVARQTRRVLDRLGT 546
>gi|160898092|ref|YP_001563674.1| glutamate racemase [Delftia acidovorans SPH-1]
gi|160363676|gb|ABX35289.1| glutamate racemase [Delftia acidovorans SPH-1]
Length = 296
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 120/237 (50%), Gaps = 13/237 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA-LKKRLMFLFSDIL 72
+ I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ A +++R + +
Sbjct: 6 SPIGVFDSGIGGLSVLQALRHELPHERFVYLADSGNAPYGDARGDAFVQQRTRTIARHLR 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA D LR+ P + +G PAIK A+ +Q+G + +++T T+
Sbjct: 66 EQHQIKVLVIACNTATAAAVDMLRAEMPELPLIGVEPAIKPASLSSQTGHVGVMATRGTV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182
+ L+ + + H+ LA +EE + + D + E+ G
Sbjct: 126 SSARFARLVAEHGQRVQFHVQPCDGLAKAIEE-STEQPVPADPMATEVAQLCARYVNALG 184
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
F +K G+ D +VL CTHY R L + ++D +AR+ R +L R+ T
Sbjct: 185 SFGQKTGE-MDSLVLGCTHYIFAREQLRTLLGPDIQFIDTGAPVARQTRRVLDRLGT 240
>gi|238760127|ref|ZP_04621275.1| Glutamate racemase [Yersinia aldovae ATCC 35236]
gi|238701625|gb|EEP94194.1| Glutamate racemase [Yersinia aldovae ATCC 35236]
Length = 241
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 4/238 (1%)
Query: 35 LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94
++P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+
Sbjct: 1 MLPDLHYIYAFDNVAFPYGEKSGEFIIERVVEIVTAVQQRHPLAIVVIACNTASTVSLPA 60
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
LR F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+
Sbjct: 61 LRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTRDLIERFATDCKIELLG 119
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
S L E G + ++ +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 120 SSELVELAETKLHGGVVPQEALKKILHPWLAMREPP--DTIVLGCTHFPLLTEELAQVLP 177
Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+D+ +IARR L+ + ++ A ++ D A+ ++QG+G +
Sbjct: 178 EGTRMVDSGAAIARRTAWLISSQENVVSSQDENIAYCMALNADTDALLPVLQGYGFPT 235
>gi|238785771|ref|ZP_04629743.1| Glutamate racemase [Yersinia bercovieri ATCC 43970]
gi|238713305|gb|EEQ05345.1| Glutamate racemase [Yersinia bercovieri ATCC 43970]
Length = 241
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 4/238 (1%)
Query: 35 LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94
++P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+
Sbjct: 1 MLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPA 60
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
LR F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+
Sbjct: 61 LRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTLDLIARFATDCKIELLG 119
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
S L E G + + +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 120 SSELVELAESKLHGGVVSVEALKKILHPWLAMREPP--DTIVLGCTHFPLLAEELAQVLP 177
Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+D+ +IARR L+ + ++ A ++ D A+ ++QG+G ++
Sbjct: 178 EGTRMVDSGAAIARRTAWLISSQENVVSSQDENMAYCMALNTDTDALLPVLQGYGFQT 235
>gi|16273625|ref|NP_439883.1| glutamate racemase [Haemophilus influenzae Rd KW20]
gi|6166587|sp|P52973|MURI_HAEIN RecName: Full=Glutamate racemase
gi|3212239|gb|AAC23386.1| glutamate racemase (murI) [Haemophilus influenzae Rd KW20]
Length = 269
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGMAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P +++ S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMEPSAAIAKRIKYLLDDKN 228
>gi|195937619|ref|ZP_03083001.1| glutamate racemase [Escherichia coli O157:H7 str. EC4024]
Length = 143
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+
Sbjct: 61 PLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRS 119
Query: 136 YTSNLIHSYVSQCHIHLVSS 155
YT LI + ++C I ++ S
Sbjct: 120 YTHELIARFANECQIEMLGS 139
>gi|297539329|ref|YP_003675098.1| glutamate racemase [Methylotenera sp. 301]
gi|297258676|gb|ADI30521.1| glutamate racemase [Methylotenera sp. 301]
Length = 283
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 6/255 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+K + P K ++ I +FDSG+GG+ VL+ ++ L+P +YVAD PYGN +
Sbjct: 6 IKSNETPVNKPIEKPIAVFDSGVGGISVLKHIQALLPNEQLLYVADSKYAPYGNKTAAEI 65
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ R + ++ K L V+ACNTA D LR + S+ +G PA+K AA +++
Sbjct: 66 QARCFEIAEFLMAKDAKAL-VVACNTATAAAIDSLRERY-SLPIIGMEPAVKPAAEASRN 123
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G+I +L+T TL+ + L+ SY + + + L +E ++ D K I
Sbjct: 124 GIIGVLATTGTLKSAQFAGLLESYGRNVKVVTQACVGLVECIERG----ELDADNTKMLI 179
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D IVL CTHYP + H+ Q+ V +D ++A++ + L
Sbjct: 180 QQYCAPLLAEGADTIVLGCTHYPFVRHLIEQVVGANVALIDTGAAVAKQLKRQLEEKGLL 239
Query: 241 QTRVFDDHALFLSGK 255
R + A F K
Sbjct: 240 SNRTAEADAQFSKSK 254
>gi|148825723|ref|YP_001290476.1| glutamate racemase [Haemophilus influenzae PittEE]
gi|229846914|ref|ZP_04467020.1| glutamate racemase [Haemophilus influenzae 7P49H1]
gi|166231037|sp|A5UBE2|MURI_HAEIE RecName: Full=Glutamate racemase
gi|148715883|gb|ABQ98093.1| glutamate racemase [Haemophilus influenzae PittEE]
gi|229809998|gb|EEP45718.1| glutamate racemase [Haemophilus influenzae 7P49H1]
Length = 269
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY E+ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSEREEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|315125844|ref|YP_004067847.1| glutamate racemase [Pseudoalteromonas sp. SM9913]
gi|315014358|gb|ADT67696.1| glutamate racemase [Pseudoalteromonas sp. SM9913]
Length = 262
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I++FDSGIGG VL+ ++ +P + Y D+ PYG + RL L I D+
Sbjct: 5 IMVFDSGIGGTTVLEHIQQSIPHAQYSYFMDNALLPYGAQSQQTIIHRLCGLIQFIEDES 64
Query: 76 QPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V L VIACNTA T +R + +G VPAIK AA TQS I +L+TPAT+
Sbjct: 65 LNVDLIVIACNTASTSALSSVRQ-ITDIPIVGVVPAIKPAAQLTQSKHIGLLATPATVSS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + S L SS+ L + E + D++ E++ I K+ DV
Sbjct: 124 PYTDALIKEHASSITTSLYSSVELVTLAETLFFTQHLDIDKLHTELDRLNINKD---IDV 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+P++ V LD+ +IA+R LL
Sbjct: 181 LVLGCTHFPILAKPISDYFNTQVQLLDSGAAIAKRVSSLL 220
>gi|213420373|ref|ZP_03353439.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 156
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 93/148 (62%), Gaps = 1/148 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVE 163
YT LI + ++C I ++ S L E
Sbjct: 120 YTHELIARFANECQIAMLGSAELVELAE 147
>gi|307719381|ref|YP_003874913.1| glutamate racemase [Spirochaeta thermophila DSM 6192]
gi|306533106|gb|ADN02640.1| glutamate racemase [Spirochaeta thermophila DSM 6192]
Length = 286
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 116/218 (53%), Gaps = 11/218 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L DSGIGG+ L + F+YVAD FPYG L+ L+ L +D+L ++
Sbjct: 28 VLFLDSGIGGIPYLLWALEHIEGEEFVYVADRAHFPYGPRSHEELEAILVDLVADLLRRF 87
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L V+ACNTA + LR+ + + F+G VPAIK AA+ T++G++ +L+T TLR
Sbjct: 88 RPKLVVLACNTASVVGLPALRARY-EIPFVGVVPAIKPAASLTRTGVVGLLATERTLRDF 146
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE----IKKEIEGCFIEKEGKR 191
YT LI +Y + + V S + VE I E+E +++ +E C +
Sbjct: 147 YTDELIAAYANGARVVKVPSPHIVEFVEHRF--IDAAEEERRTAVREAVERCVAQG---- 200
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D IVL CTH+ + R L+ V +D+ + + RR
Sbjct: 201 ADTIVLGCTHFVFLEAQIRSLAGEHVQVIDSREGVGRR 238
>gi|145639716|ref|ZP_01795319.1| glutamate racemase [Haemophilus influenzae PittII]
gi|145271273|gb|EDK11187.1| glutamate racemase [Haemophilus influenzae PittII]
gi|309750685|gb|ADO80669.1| Glutamate racemase [Haemophilus influenzae R2866]
Length = 269
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AD 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|146306097|ref|YP_001186562.1| glutamate racemase [Pseudomonas mendocina ymp]
gi|167017319|sp|A4XR64|MURI_PSEMY RecName: Full=Glutamate racemase
gi|145574298|gb|ABP83830.1| glutamate racemase [Pseudomonas mendocina ymp]
Length = 263
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 5/222 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q + +FDSG+GGL VL+++R L+P +YVAD PYG +++R + + +L
Sbjct: 5 QAPVGVFDSGVGGLSVLREIRQLLPNESLLYVADSGHVPYGEKSAEYIRERCVLITEHLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA ELR +P + +G PA+K AAA T+SG++ +L+T TL
Sbjct: 65 AQGAKAL-VLACNTATAAAAAELRERYPQLPIVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E A + ++ +E E
Sbjct: 124 KSAKFAALLDRFASDVRVITQPCPGLVECIEAGALQAPATRELLQGYVEPLLAEG----C 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYP + + L P V +D ++AR+ + LL
Sbjct: 180 DTLILGCTHYPFLKPLLHSLVPDSVSLIDTGAAVARQLQRLL 221
>gi|319776733|ref|YP_004139221.1| glutamate racemase [Haemophilus influenzae F3047]
gi|329123156|ref|ZP_08251726.1| glutamate racemase [Haemophilus aegyptius ATCC 11116]
gi|317451324|emb|CBY87562.1| glutamate racemase [Haemophilus influenzae F3047]
gi|327471711|gb|EGF17153.1| glutamate racemase [Haemophilus aegyptius ATCC 11116]
Length = 269
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGMAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|224367637|ref|YP_002601800.1| MurI [Desulfobacterium autotrophicum HRM2]
gi|223690353|gb|ACN13636.1| MurI [Desulfobacterium autotrophicum HRM2]
Length = 283
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 6/226 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GG+ VL+ +R L+P+ IYVAD PYGN ++ R + +L+K
Sbjct: 25 VFDSGVGGVSVLKWIRQLLPQEDLIYVADKGYAPYGNKSSDYVRDRAAHITRFLLEKRVK 84
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V+ACNTA LRS F + F+G P ++ A T+SG+I +L+T TLR T
Sbjct: 85 AV-VVACNTATVTAITTLRSMF-KVPFIGIEPGVRPALNATRSGVIGVLATTETLRSTSF 142
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ LI + + + L +VE A E +K +E + K D IVL
Sbjct: 143 NALIQRFCKDIRVEVQECPGLMEQVESMA----FTTPETRKLLERYLVPLLEKGADTIVL 198
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
CTHYP +V + R+++ + ++ ++++R+ +L ++ TR
Sbjct: 199 GCTHYPFLVPLVREMAGQEIRIIETGEAVSRQVMRILTTMDLLTTR 244
>gi|260582090|ref|ZP_05849885.1| glutamate racemase [Haemophilus influenzae NT127]
gi|260094980|gb|EEW78873.1| glutamate racemase [Haemophilus influenzae NT127]
Length = 269
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYLLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AD 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|309972870|gb|ADO96071.1| Glutamate racemase [Haemophilus influenzae R2846]
Length = 269
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QIINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|332535187|ref|ZP_08410994.1| glutamate racemase [Pseudoalteromonas haloplanktis ANT/505]
gi|332035406|gb|EGI71906.1| glutamate racemase [Pseudoalteromonas haloplanktis ANT/505]
Length = 266
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 115/224 (51%), Gaps = 5/224 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I++FDSGIGG VL+ ++ +P + Y D+ PYG + RL L I
Sbjct: 5 IMVFDSGIGGTTVLEHIKQSIPNAQYSYFMDNALLPYGAQSQQTIINRLCSLIHFIKANT 64
Query: 76 QPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V L VIACNTA T +R + +G VPAIK AA T+S I +L+TPAT+
Sbjct: 65 LNVDLIVIACNTASTSALSAVRQ-ITDIPIVGVVPAIKPAAELTRSNHIGLLATPATVAS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+YT LI + ++L SS+ L + EE + +++ + ++ I+ K DV
Sbjct: 124 SYTKTLIAEHARNVIVNLYSSVELVTLAEECFFTGSLDTNKLYQVLDELHID---KTIDV 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+VL CTH+P++ Q V LD+ +IA R LL ++N
Sbjct: 181 LVLGCTHFPILAGPISQYFEGNVKLLDSGVAIANRVNFLLNQLN 224
>gi|121605775|ref|YP_983104.1| glutamate racemase [Polaromonas naphthalenivorans CJ2]
gi|120594744|gb|ABM38183.1| glutamate racemase [Polaromonas naphthalenivorans CJ2]
Length = 272
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 129/274 (47%), Gaps = 23/274 (8%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I +FDSGIGGL VL+ +R MP HFIY+AD PYG + + R + +
Sbjct: 1 MDRAIGVFDSGIGGLSVLKALRAAMPHEHFIYIADSGHAPYGERDVAHVLARSRAIVQYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ L V+ACNTA LR+ P +A +G PA+K AA TQ+G I +++T +T
Sbjct: 61 VNQNVKAL-VMACNTATAAAIHLLRTEHPGLALIGVEPALKPAAGRTQTGRIGVMATRST 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGC--FIEK 187
L L+ + + + A I+ D + + I C +I
Sbjct: 120 LASAKFQALLAAQSGGPQ----KVEFIVQPCDGLAHAIEASADTGDATRTIALCAHYISA 175
Query: 188 EGK------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RI 237
G+ + D +VL CTHYP R L V ++DN +++AR+ LLP
Sbjct: 176 MGRFGTETGQIDTLVLGCTHYPFASEHLRALVGAQVQFIDNGEAVARQTLRLLPASVMAA 235
Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
N RV +LF +G+PD + GL +
Sbjct: 236 NAPPGRV----SLFTTGQPDTLQAAAQRWLGLSA 265
>gi|301170494|emb|CBW30101.1| glutamate racemase [Haemophilus influenzae 10810]
Length = 269
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|319898188|ref|YP_004136385.1| glutamate racemase [Haemophilus influenzae F3031]
gi|317433694|emb|CBY82082.1| glutamate racemase [Haemophilus influenzae F3031]
Length = 269
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 120/230 (52%), Gaps = 4/230 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLSAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y L+ + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELVDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 182 ---LDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 228
>gi|315186198|gb|EFU19960.1| glutamate racemase [Spirochaeta thermophila DSM 6578]
Length = 286
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 136/268 (50%), Gaps = 17/268 (6%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
PC +L DSGIGG+ L + F+YVAD FPYG L+ L+
Sbjct: 24 PC-----RPVLFLDSGIGGIPYLLWALNHIEGEEFVYVADRAHFPYGPRSHEELEAILVD 78
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
L + +L +++P L V+ACNTA + LR+ + ++ F+G VPAIK AA+ T++G++ +L
Sbjct: 79 LVAGLLRRFRPKLVVLACNTASVVGLPALRARY-AIPFVGVVPAIKPAASLTRTGVVGLL 137
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY---ACGIKIKEDEIKKEIEGC 183
+T TLR YT LI +Y + + V S + VE A G + + +++ ++ C
Sbjct: 138 ATERTLRDFYTDELIATYANGARVVKVPSPHIVEFVEHRFIDASG-EERRTAVREAVDRC 196
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ D IVL CTH+ + R L+ V +D+ + + RR LL + + R
Sbjct: 197 VAQG----ADTIVLGCTHFVFLEAQIRSLAGEHVQVIDSREGVGRRLGHLLSYLPCGR-R 251
Query: 244 VFDDHALFLSGK--PDIAMRRLMQGFGL 269
+ +L+G+ P+ R + +GL
Sbjct: 252 GPSTASFYLTGRTPPEGRYLRFTRHYGL 279
>gi|162420811|ref|YP_001604760.1| glutamate racemase [Yersinia pestis Angola]
gi|165928375|ref|ZP_02224207.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936981|ref|ZP_02225547.1| glutamate racemase [Yersinia pestis biovar Orientalis str. IP275]
gi|166009624|ref|ZP_02230522.1| glutamate racemase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213755|ref|ZP_02239790.1| glutamate racemase [Yersinia pestis biovar Antiqua str. B42003004]
gi|167401233|ref|ZP_02306733.1| glutamate racemase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420886|ref|ZP_02312639.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425952|ref|ZP_02317705.1| glutamate racemase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270488739|ref|ZP_06205813.1| glutamate racemase [Yersinia pestis KIM D27]
gi|294505559|ref|YP_003569621.1| glutamate racemase [Yersinia pestis Z176003]
gi|162353626|gb|ABX87574.1| glutamate racemase [Yersinia pestis Angola]
gi|165915223|gb|EDR33834.1| glutamate racemase [Yersinia pestis biovar Orientalis str. IP275]
gi|165919605|gb|EDR36938.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991546|gb|EDR43847.1| glutamate racemase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205157|gb|EDR49637.1| glutamate racemase [Yersinia pestis biovar Antiqua str. B42003004]
gi|166961015|gb|EDR57036.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049258|gb|EDR60666.1| glutamate racemase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167055100|gb|EDR64899.1| glutamate racemase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|262363626|gb|ACY60347.1| glutamate racemase [Yersinia pestis D106004]
gi|262367556|gb|ACY64113.1| glutamate racemase [Yersinia pestis D182038]
gi|270337243|gb|EFA48020.1| glutamate racemase [Yersinia pestis KIM D27]
gi|294356018|gb|ADE66359.1| glutamate racemase [Yersinia pestis Z176003]
Length = 240
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 3/199 (1%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MP+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L
Sbjct: 1 MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 60
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T AT+ +YT +LI + + C I L+ S
Sbjct: 61 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGS 119
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + + +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 120 SELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DTIVLGCTHFPLLTEELAQVLPE 177
Query: 216 PVDWLDNSDSIARRARCLL 234
+D+ +IARR L+
Sbjct: 178 GTRMVDSGAAIARRTAWLI 196
>gi|257464953|ref|ZP_05629324.1| glutamate racemase [Actinobacillus minor 202]
gi|257450613|gb|EEV24656.1| glutamate racemase [Actinobacillus minor 202]
Length = 253
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 6/251 (2%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL + ++R ++P H++Y D+ FPY + AL +R + + I +K L V+
Sbjct: 1 MGGLTIYDEVRKVLPNAHYLYCFDNAFFPYSERSEQALIERAVKIVQKIAEKQPLDLVVV 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA T++ LR F +G VPAIK AAA +++ I +L+T T++R Y +LIH
Sbjct: 61 ACNTASTVVLPALREHF-DFPIVGTVPAIKPAAAISKTKTIGLLATVGTIKRPYVLDLIH 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
Y C + + + + E + +K+ +E D ++L CTH+
Sbjct: 120 RYAKDCQVEKIGNTQIVELAETKLLTGTVDLPSLKECVEPWL---NHPSLDTVILGCTHF 176
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
PL+ +QL P ++D+ ++IA+R + LL + H ++ F + + R
Sbjct: 177 PLLKEELKQLLPQVTYFVDSGEAIAKRVQSLLLENHHHSQEKERENTAFCTELTENFKNR 236
Query: 263 --LMQGFGLKS 271
+M G KS
Sbjct: 237 EVMMHKLGFKS 247
>gi|213583010|ref|ZP_03364836.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 135
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRP 119
Query: 136 YTSNLIHSYVSQCHI 150
YT LI + ++C I
Sbjct: 120 YTHELIARFANECQI 134
>gi|325286852|ref|YP_004262642.1| Glutamate racemase [Cellulophaga lytica DSM 7489]
gi|324322306|gb|ADY29771.1| Glutamate racemase [Cellulophaga lytica DSM 7489]
Length = 263
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 49/276 (17%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I +FDSG+GG + +++ L+P + IY+AD PYG + RL +++L
Sbjct: 3 NNPIGVFDSGVGGTSIWKEIHKLLPLENTIYLADSANAPYGKKSPEDIL-RLSIKNTELL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + V+ACNTA T LR T+ +++F+G PAIK A + S + +L+T TL
Sbjct: 62 LQHNCKIIVVACNTATTNAITYLRETYTNVSFIGIEPAIKPAVLQSNSKTVGVLATKGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF-IEKEGKR 191
SS + S V+ +A GIKI I+KE EG + + GK
Sbjct: 122 ---------------------SSSLFHSTVKNHAEGIKI----IEKEGEGLVPLIESGKA 156
Query: 192 T--------------------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
T D +VL CTHYP ++ V ++L P V+ +D+ +++AR+ +
Sbjct: 157 TSVEAKDLLKTFLEPMLEQNIDYLVLGCTHYPYLIPVLKELLPAHVNIIDSGEAVARQTK 216
Query: 232 CLLPRIN-THQTRVFDDHALFLSGKPDIAMRRLMQG 266
+L R N ++ V H + + I +R ++G
Sbjct: 217 AILERENLLNRGNVASSHKFYTNADVSI-LRSFLKG 251
>gi|327481904|gb|AEA85214.1| glutamate racemase [Pseudomonas stutzeri DSM 4166]
Length = 264
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 5/211 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+++R +P +Y+AD PYG +++R + + +++
Sbjct: 10 VFDSGVGGLSVLREIRRRLPHESLLYLADSAHVPYGEKSPEYIRERCRIIAAFFVEQGAK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA ELR +P + +G PA+K AAA T+SG++ +L+T TL+
Sbjct: 70 AL-VLACNTATAAGVTELRELYPDLPIIGMEPAVKPAAAATRSGVVGVLATTGTLKSARF 128
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + + L R+E + + +EG + D ++L
Sbjct: 129 AALLDRFAGDVRVITQPCPGLVERIEAG----DLASANTRAMLEGWVGPLLAQGCDTLIL 184
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
CTHYP I + QL P V +D ++AR
Sbjct: 185 GCTHYPFIRPLLAQLLPGDVRLIDTGAAVAR 215
>gi|240950246|ref|ZP_04754526.1| glutamate racemase [Actinobacillus minor NM305]
gi|240295247|gb|EER46046.1| glutamate racemase [Actinobacillus minor NM305]
Length = 253
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 6/251 (2%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL + ++R ++P H++Y D+ FPY + AL +R + + I +K L V+
Sbjct: 1 MGGLTIYDEVRKVLPNAHYLYCFDNAFFPYSEKSEQALIERAVKIVQKIAEKQPLDLVVV 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA T++ LR F +G VPAIK AAA +++ I +L+T T++R Y +LIH
Sbjct: 61 ACNTASTVVLPALRERF-DFPIVGTVPAIKPAAAISKTKTIGLLATVGTIKRPYVLDLIH 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
Y C + + + + E + +K+ +E D ++L CTH+
Sbjct: 120 RYAKDCQVEKIGNTQIVELAETKLLTGSVDLFSLKECVEPWL---NHPTLDTVILGCTHF 176
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
PL+ +QL P ++D+ ++IA+R + LL + H ++ F + + R
Sbjct: 177 PLLKEELKQLLPQVTYFVDSGEAIAKRVQSLLLENHHHSQEKERENTAFCTELTENFKNR 236
Query: 263 --LMQGFGLKS 271
+M G KS
Sbjct: 237 EVMMHKLGFKS 247
>gi|167467898|ref|ZP_02332602.1| glutamate racemase [Yersinia pestis FV-1]
Length = 198
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 1/164 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ + + + +
Sbjct: 27 TALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQR 86
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+T AT+
Sbjct: 87 HPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHA 145
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+YT +LI + + C I L+ S L E G + + +KK
Sbjct: 146 SYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKK 189
>gi|319957379|ref|YP_004168642.1| glutamate racemase [Nitratifractor salsuginis DSM 16511]
gi|319419783|gb|ADV46893.1| glutamate racemase [Nitratifractor salsuginis DSM 16511]
Length = 278
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 109/232 (46%), Gaps = 12/232 (5%)
Query: 11 KLQNS------ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
K+QN I IFDSG+GGL VL+ + +P +Y+AD PYG ++
Sbjct: 4 KIQNPKSKIVRIGIFDSGLGGLTVLRPIMQALPGAEILYLADTAHAPYGEKSREEIRSYS 63
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + + ++ V+ACNTA + LR FP + +G P IK A ++S +
Sbjct: 64 LGIAEYFIREHDVDALVVACNTATSAAIATLRERFPDLPIVGTEPGIKPAVRASRSAKVG 123
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIEG 182
IL+TPATL L ++ + L L R+E +++ E ++ +EG
Sbjct: 124 ILATPATLAGEKYQALAERLCTEHEVQLFEQACPGLVERIERG----EVESPECRRMLEG 179
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D IVL CTHYPL R++ PV ++ ++IARR LL
Sbjct: 180 WLAPMREAGVDTIVLGCTHYPLAASAIREVMGTPVTLIETGEAIARRLLSLL 231
>gi|264677499|ref|YP_003277405.1| glutamate racemase [Comamonas testosteroni CNB-2]
gi|262208011|gb|ACY32109.1| glutamate racemase [Comamonas testosteroni CNB-2]
Length = 298
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA-LKKRLMFLFSDIL 72
+ I IFDSG+GGL VLQ +R +P F+Y+AD PYG+ A +++R + + +L
Sbjct: 6 SPIGIFDSGVGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAIAKYLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++ + VIACNTA + LR P + +G PAIK A+ +Q+ + +++T T+
Sbjct: 66 EQHDIKILVIACNTATAAAVELLRERLPQLPVIGVEPAIKPASFSSQTHHVGVMATRGTI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182
+ L+ + + HL + LA +E+ + + ED EI G
Sbjct: 126 SSQRVARLVSEHGQRAEFHLQACDGLARAIEQ-STEQALPEDASATEIRALCAKYTSALG 184
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
F K G+ D +VL CTHY + R L + LD +AR+ R +L + N
Sbjct: 185 SFGLKTGQ-MDTLVLGCTHYVFVKDDLRALLGPDIQLLDTGAPVARQTRRMLEQRN 239
>gi|323703720|ref|ZP_08115360.1| glutamate racemase [Desulfotomaculum nigrificans DSM 574]
gi|323531308|gb|EGB21207.1| glutamate racemase [Desulfotomaculum nigrificans DSM 574]
Length = 268
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 126/242 (52%), Gaps = 9/242 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++R L+P IY AD PYG+ + +++R + + +L +
Sbjct: 7 IGIFDSGVGGLSVAREIRRLLPMEDIIYYADSAFCPYGDKDPEVIRRREIAIVDFLLSQG 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA + D+LR FP + +G PA+K A A T++G I IL+T T+
Sbjct: 67 AKMI-VVACNTASSTGLDDLRKMFP-VPIVGMEPAVKPAVAATRNGKIGILATSVTIAGE 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
++LI + ++ L RVE ++ + E +K + G ++ D I
Sbjct: 125 RLASLIKRFAEHVNVITQPCPGLVERVEHG----QLDDPETEKILAGFLKPILEQQADTI 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDDHALFLS 253
VL CTHYP + + ++ + +D +++A++ +L N H+ RV + F S
Sbjct: 181 VLGCTHYPFLTPLIEKIVGPNIAIIDTGEAVAKQVSRVLNEHNLAVHEPRVGQEK-FFTS 239
Query: 254 GK 255
G
Sbjct: 240 GN 241
>gi|89901373|ref|YP_523844.1| glutamate racemase [Rhodoferax ferrireducens T118]
gi|89346110|gb|ABD70313.1| glutamate racemase [Rhodoferax ferrireducens T118]
Length = 271
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 1/230 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSGIGGL +L+ +R +P F+Y+AD PYG ++ + R + + +L
Sbjct: 9 KRPIGVFDSGIGGLSILKALRAELPREDFVYMADSGHAPYGERDEAHVIARSSAITTHLL 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y V+ACNTA LR P + +G PA+K A A +++ I +++T +TL
Sbjct: 69 AQYDIQALVVACNTATAAAISTLRQAHPLLPIIGLEPALKPALALSKTRRIGVMATRSTL 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L+ S Q LA +E I G F EG+
Sbjct: 129 GSAKFGTLVASLAGQAEFMCQPCDGLADAIERQDTTKTIALCAYYTGAIGRFGINEGE-I 187
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTHYP RQL V +D +++AR+ R LLP ++ T
Sbjct: 188 DTLVLGCTHYPFASDTLRQLLGSSVQLIDTGEAVARQTRRLLPSPSSADT 237
>gi|221068298|ref|ZP_03544403.1| glutamate racemase [Comamonas testosteroni KF-1]
gi|220713321|gb|EED68689.1| glutamate racemase [Comamonas testosteroni KF-1]
Length = 298
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 116/232 (50%), Gaps = 13/232 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA-LKKRLMFLFSDIL 72
+ I IFDSG+GGL VLQ +R +P F+Y+AD PYG+ A +++R + + +L
Sbjct: 6 SPIGIFDSGVGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAIAQYLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA + +R P + +G PAIK A+ +Q+ + +++T T+
Sbjct: 66 QQHDIKILVIACNTATAAAVELMRERMPQLPVIGVEPAIKPASFSSQTHHVGVMATRGTV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182
+ L+ + + HL + LA +E+ + + ED EI G
Sbjct: 126 SSQRVARLVAEHGQRAEFHLQACDGLARAIEQ-STEQALPEDASATEIRALCTKYTSALG 184
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
F K G+ D +VL CTHY + R L + +LD +AR+ R +L
Sbjct: 185 SFGHKTGQ-MDTLVLGCTHYVFVKDDLRALLGPDIQFLDTGAPVARQTRRML 235
>gi|146283506|ref|YP_001173659.1| glutamate racemase [Pseudomonas stutzeri A1501]
gi|167017320|sp|A4VPB6|MURI_PSEU5 RecName: Full=Glutamate racemase
gi|145571711|gb|ABP80817.1| glutamate racemase [Pseudomonas stutzeri A1501]
Length = 264
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 5/217 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+++R +P +Y+AD PYG +++R + + ++K
Sbjct: 10 VFDSGVGGLSVLREIRQRLPHESLLYLADSAHVPYGEKSPEYIRERCRVIAAFFVEKGAK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA ELR +P + + PA+K AA T+SG++ +L+T TL+
Sbjct: 70 AL-VVACNTATAAGVTELRELYPQLPIIAMEPAVKPAALATRSGVVGVLATTGTLKSAKF 128
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + + + L R+E ++ + + + G + D ++L
Sbjct: 129 AALLDRFAADVRVITQPCPGLVERIEAG----DLESADTRAMLMGWVEPMLAQGCDTLIL 184
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
CTHYP I + +QL P + +D ++AR R +L
Sbjct: 185 GCTHYPFIRPLLQQLLPNDIRLIDTGAAVARHLREML 221
>gi|332297563|ref|YP_004439485.1| Glutamate racemase [Treponema brennaborense DSM 12168]
gi|332180666|gb|AEE16354.1| Glutamate racemase [Treponema brennaborense DSM 12168]
Length = 282
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG GGL ++ ++ PE +Y+AD FPYG + + + I+ K+QP
Sbjct: 8 LDSGTGGLPYMRYLKQQCPEARCVYLADTFHFPYGEKSVSQIIRYATDVSDLIIRKWQPK 67
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
VIACNT D LR FP F+G VPA+KQAAA T++G+I +L+T T+R YT
Sbjct: 68 AVVIACNTMSVTALDSLRKRFPQTPFIGTVPAVKQAAACTRNGIIGLLATTRTVRDPYTD 127
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
LI + C + L +E E + + F + G D ++L
Sbjct: 128 ALIRKFAPGCTVVRRGDGALIDFIEHRLVSAPDAERKRAVQPAADFFKSHG--ADTVILG 185
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
CTH+ I ++ V +D+ + R+A
Sbjct: 186 CTHFVHIADDIQEAVGRGVSVIDSRSGVVRQA 217
>gi|226946178|ref|YP_002801251.1| glutamate racemase [Azotobacter vinelandii DJ]
gi|226721105|gb|ACO80276.1| glutamate racemase [Azotobacter vinelandii DJ]
Length = 263
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + +FDSG+GGL VL ++R +P YVAD PYG +++R + + +L
Sbjct: 4 EAPVGVFDSGVGGLSVLSEIRARLPGESLFYVADSGHVPYGEKSSEYIRERCRHIAAFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA ELR +P + +G PA+K AAA T+SG + +L+T TL
Sbjct: 64 ERGAKAL-VLACNTATAAAVAELRELYPELPVIGMEPAVKPAAAATRSGRVGVLATSGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + L R+E + ++ + G +
Sbjct: 123 KSARFAALLDRFAGDVRVITQPCPGLVERIEAG----DLDGPATRELLRGFVAPLLAEGC 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYP + + L P + +D ++AR+ LL
Sbjct: 179 DTLILGCTHYPFVRPLLGTLVPDSISLIDTGAAVARQLERLL 220
>gi|145636801|ref|ZP_01792467.1| glutamate racemase [Haemophilus influenzae PittHH]
gi|145270099|gb|EDK10036.1| glutamate racemase [Haemophilus influenzae PittHH]
Length = 257
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GG + ++ + L+P +H++Y D+ GFPY E+ ++ R + I +Y
Sbjct: 3 SGVGGFSIYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAACQLINQRYPLDAI 62
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T T++R Y L
Sbjct: 63 VIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATKGTVKRHYIDEL 121
Query: 141 IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
I + C + + + L E+ G + +K E+ + D +VL CT
Sbjct: 122 IDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGMAD---LDTLVLGCT 178
Query: 201 HYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
H+PLI + P ++D S +IA+R + LL N
Sbjct: 179 HFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKN 216
>gi|260063790|ref|YP_003196870.1| glutamate racemase [Robiginitalea biformata HTCC2501]
gi|88783235|gb|EAR14408.1| glutamate racemase [Robiginitalea biformata HTCC2501]
Length = 257
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILD 73
+FDSG+GGL + ++ L+P H IY+AD PYG A+ +K +L
Sbjct: 3 VFDSGVGGLTIWHELVRLLPAEHTIYLADSANAPYGGQSPGAILELARKNTRWLLERGCK 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L V+ACNTA T D LR+ FP + F+G PAIK AA ++SG I +L+T TL
Sbjct: 63 -----LIVVACNTATTNAIDRLRAEFP-VPFIGIEPAIKPAALNSRSGKIGVLATRGTLS 116
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ ++ ++ S I + L R+E D +++ ++ ++ D
Sbjct: 117 SSLFASTSRNFGSGIEIVEQEGVDLVERIESAGPDDPELRDILERLLKPMLLQG----ID 172
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFL 252
+VL CTHYPL+ L P V LD +AR++R +L R + H L
Sbjct: 173 YLVLGCTHYPLLKPTLEHLLPEGVRILDCGLPVARQSRAILEREGLLRDAGGPVRHELLT 232
Query: 253 SGKPDIAMRRLMQ 265
+G P + + L+Q
Sbjct: 233 NGDPGVMRQVLLQ 245
>gi|94676801|ref|YP_588621.1| glutamate racemase [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|94219951|gb|ABF14110.1| glutamate racemase [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 274
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 122/232 (52%), Gaps = 2/232 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ILI DSG+GGL + +++ ++P +++YV D+ FPYG + RL+ + + +
Sbjct: 10 TILIVDSGVGGLSIFYQIKKIIPNANYLYVFDNEAFPYGEKTKRFIINRLIIIINAVRKL 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ L +IACNTA L LR F +G +PAIK A T S +I +L+T AT+
Sbjct: 70 HYVDLIIIACNTASILALKALRQYF-FYPIIGVLPAIKLATTITNSKVIGLLATTATINS 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +N I++Y I + + L + VE G KI +++ + + + D
Sbjct: 129 KYITNSINNYKKSYKIISLKAPELVNLVEAKLHGEKISLLSLREILFPWLKTSQTYKLDT 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-INTHQTRVF 245
I+L CTH+PLI + + P + +D ++A R L + IN++Q+ +F
Sbjct: 189 IILGCTHFPLIYEELKLILPTSIKIIDAHQTVANRVFLLSKKFINSNQSSIF 240
>gi|330951099|gb|EGH51359.1| glutamate racemase [Pseudomonas syringae Cit 7]
Length = 271
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 5/240 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 16 IFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 76 AL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + + + L +E + +I++ ++ R D I+L
Sbjct: 135 AALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARCDTIIL 190
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYP + + RQ+ P V +D ++AR+ + LL R + + V D + S PD
Sbjct: 191 GCTHYPFLKPLLRQMLPESVTLIDTGAAVARQLQRLLARSDLLASGVARDTVYWSSDIPD 250
>gi|121610154|ref|YP_997961.1| glutamate racemase [Verminephrobacter eiseniae EF01-2]
gi|121554794|gb|ABM58943.1| glutamate racemase [Verminephrobacter eiseniae EF01-2]
Length = 301
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 9/230 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL +R +P F+Y+AD PYG + R + + +
Sbjct: 19 QQPIGVFDSGVGGLSVLHALRAALPRERFVYLADSANAPYGERAAAQVSARTLAITGYLR 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++ V+ACNTA DELR P + +G PA+K A A TQ+G + ++ T TL
Sbjct: 79 AQHRIKALVVACNTATAAAIDELRQRHPGLPLVGLEPALKPALALTQTGHVGVIGTRGTL 138
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK--------EIEGCF 184
L+ S + H L LA +E + G F
Sbjct: 139 GSAKFGKLLASLADRAHFVLQPCDGLAHAIERSVLSTAPVSGSTETGALCQRYLHAMGTF 198
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ G+ D +VL CTHY + R L V +++ +AR+ R LL
Sbjct: 199 GKAPGQ-IDTLVLGCTHYLFVTDELRALLGPGVQFVETGAPVARQTRRLL 247
>gi|171059222|ref|YP_001791571.1| glutamate racemase [Leptothrix cholodnii SP-6]
gi|170776667|gb|ACB34806.1| glutamate racemase [Leptothrix cholodnii SP-6]
Length = 272
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + L+P +YVAD PYG +++R + + + + D+
Sbjct: 12 IGVFDSGLGGLSVLRAIHELLPSATLMYVADSGHAPYGERSVAYVEERSLRIAAFLRDQG 71
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VL V+ACNTA LR A +G P IK AAA T++G I +L+T TLR
Sbjct: 72 AQVL-VVACNTATAAAVQALRMHHRDWAIVGVEPGIKPAAAMTRNGRIGVLATEGTLRSD 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L ++ + + L + LA+ +E A + + + ++ C + D +
Sbjct: 131 RFKLLAQAHAAHVELFLQACPGLAAAIESGA----LTSPAVTERVQTCCAPLREHQVDTV 186
Query: 196 VLACTHYPLIVH-VFRQLSPWPVDWLDNSDSIARRARCL 233
VL CTHYP + + + L P V +D +D++ARR L
Sbjct: 187 VLGCTHYPFVANQIAAALGP-DVVLIDTADAVARRTLAL 224
>gi|302186441|ref|ZP_07263114.1| glutamate racemase [Pseudomonas syringae pv. syringae 642]
Length = 271
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 5/240 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 16 IFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 76 AL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + S + L +E + +I++ ++ R D I+L
Sbjct: 135 AALLDRFASDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARCDTIIL 190
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYP + + R++ P V +D ++AR+ + LL R + V D + S PD
Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGVLASGVARDTLYWSSDIPD 250
>gi|145629155|ref|ZP_01784954.1| glutamate racemase [Haemophilus influenzae 22.1-21]
gi|144978658|gb|EDJ88381.1| glutamate racemase [Haemophilus influenzae 22.1-21]
Length = 217
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 105/197 (53%), Gaps = 4/197 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AD 178
Query: 189 GKRTDVIVLACTHYPLI 205
D +VL CTH+PLI
Sbjct: 179 MADLDTLVLGCTHFPLI 195
>gi|315635708|ref|ZP_07890971.1| glutamate racemase [Arcobacter butzleri JV22]
gi|315480005|gb|EFU70675.1| glutamate racemase [Arcobacter butzleri JV22]
Length = 261
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 18/220 (8%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+ + ++ Y+AD PYG + + KR + + +L +Y+
Sbjct: 5 VFDSGLGGLTVLKSILKVLKNAEIFYIADTAYAPYGEKDSALILKRCEDITNYLLKEYKI 64
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++ACNTA + LR F S+ +G P IK A T+S I IL+TP+TL+
Sbjct: 65 DALIVACNTATSAAIKHLRENFSSLIVIGTEPGIKPAILNTKSSNIGILATPSTLKSDKY 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYAC---GIKIKEDEIK-----KEIEGCFIEKEG 189
L++ S ++L E AC ++I++ EI K +E I +
Sbjct: 125 QLLVNELSSIKKVNLF----------EQACPGLAMQIEKGEINTLTTYKMLEEWLIPMKE 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ D IVL CTHYPLI +++ + + D+IA+R
Sbjct: 175 ENVDTIVLGCTHYPLISQTIKKIMGEDITLIQTGDAIAKR 214
>gi|330975580|gb|EGH75646.1| glutamate racemase [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 271
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 5/240 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 16 IFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 76 AL-VVACNTATAAGVSHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + + + L +E + +I++ ++ R D I+L
Sbjct: 135 AALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLQHYVEPLLAARCDTIIL 190
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYP + + R++ P V +D ++AR+ + LL R + V D + S PD
Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVSRDTVYWSSDIPD 250
>gi|239815499|ref|YP_002944409.1| glutamate racemase [Variovorax paradoxus S110]
gi|239802076|gb|ACS19143.1| glutamate racemase [Variovorax paradoxus S110]
Length = 269
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 1/227 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + + +FDSG+GGL VL +R +P F+Y AD PYG D + +R + +
Sbjct: 1 MNHPVGVFDSGVGGLSVLAALRAELPHERFVYFADTAFAPYGERGDAYVIERSRKVAEQL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++ V+ACNTA T LR+ P++ +G PA+K A A +++G I++++T T
Sbjct: 61 MAEHGIKALVVACNTATTAAIHLLRAEHPALPIVGLEPALKPAVATSRTGHIAVMATRGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + L S+ ++ V L +E + I E + E + +
Sbjct: 121 LASAKYAALRDSFAGTANVRAVPCDGLVKAIEGFDTA-AITELCARYMAEAGPLGDGPGQ 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTHYPL+ + ++ +P + ++D +A++AR +L +
Sbjct: 180 VDTVVLGCTHYPLVKNELQRHAPPALRFIDTGAPVAQQARRVLASLG 226
>gi|289678403|ref|ZP_06499293.1| glutamate racemase [Pseudomonas syringae pv. syringae FF5]
gi|330900878|gb|EGH32297.1| glutamate racemase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 271
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 5/240 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 16 IFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 76 AL-VVACNTATAAGVSHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + + + L +E + +I++ ++ R D I+L
Sbjct: 135 AALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLQHYVEPLLAARCDTIIL 190
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYP + + R++ P V +D ++AR+ + LL R + V D + S PD
Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVSRDTVYWSSDIPD 250
>gi|157736547|ref|YP_001489230.1| glutamate racemase [Arcobacter butzleri RM4018]
gi|189082951|sp|A8ERI7|MURI_ARCB4 RecName: Full=Glutamate racemase
gi|157698401|gb|ABV66561.1| glutamate racemase [Arcobacter butzleri RM4018]
Length = 261
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 18/220 (8%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+ + ++ Y+AD PYG + + KR + + +L +Y+
Sbjct: 5 VFDSGLGGLTVLKSILKVLKNAEIFYIADTAYAPYGEKDSALILKRCEDITNYLLKEYKI 64
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++ACNTA + LR F S+ +G P IK A T+S I IL+TP+TL+
Sbjct: 65 DALIVACNTATSAAIKHLRDNFSSLIVIGTEPGIKPAILNTKSSNIGILATPSTLKSDKY 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYAC---GIKIKEDEIK-----KEIEGCFIEKEG 189
L++ S ++L E AC ++I++ EI K +E I +
Sbjct: 125 QLLVNELSSIKKVNLF----------EQACPGLAMQIEKGEINTLTTYKMLEEWLIPMKE 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D IVL CTHYPLI +++ + + D+IA+R
Sbjct: 175 ANVDTIVLGCTHYPLISQTIKKIMGEDITLIQTGDAIAKR 214
>gi|66044205|ref|YP_234046.1| glutamate racemase [Pseudomonas syringae pv. syringae B728a]
gi|63254912|gb|AAY36008.1| Glutamate racemase [Pseudomonas syringae pv. syringae B728a]
gi|330972817|gb|EGH72883.1| glutamate racemase [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 271
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 5/240 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 16 IFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 76 AL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + + + L +E + +I++ ++ R D I+L
Sbjct: 135 AALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARCDTIIL 190
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYP + + R++ P V +D ++AR+ + LL R + V D + S PD
Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLTRSGLLASGVARDTVYWSSDIPD 250
>gi|152988174|ref|YP_001350643.1| glutamate racemase [Pseudomonas aeruginosa PA7]
gi|166231048|sp|A6VC58|MURI_PSEA7 RecName: Full=Glutamate racemase
gi|150963332|gb|ABR85357.1| glutamate racemase [Pseudomonas aeruginosa PA7]
Length = 265
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 18/239 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++
Sbjct: 10 VFDSGVGGLSVLREIRARLPAESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLERGAK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+
Sbjct: 70 AL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTLKSARF 128
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ L+ + S + L R+E G + + + + + G +E+ D ++
Sbjct: 129 AALLDRFASDVQVFTQPCPGLVERIEAGDLHGARTR--ALLERLLGPILEQG---CDTLI 183
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
L CTHYP + + +L P + +D ++AR RV AL SG+
Sbjct: 184 LGCTHYPFVKPLLAELIPADIAVIDTGAAVAR-----------QLERVLSTRALLASGQ 231
>gi|254238598|ref|ZP_04931921.1| glutamate racemase [Pseudomonas aeruginosa C3719]
gi|126170529|gb|EAZ56040.1| glutamate racemase [Pseudomonas aeruginosa C3719]
Length = 265
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++
Sbjct: 7 AVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+
Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTLKS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189
+ L+ + S + L R+E Y + + + I +GC
Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTHYP + + +L P + +D ++AR RV A
Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225
Query: 250 LFLSGK 255
L SG+
Sbjct: 226 LLASGQ 231
>gi|15599857|ref|NP_253351.1| glutamate racemase [Pseudomonas aeruginosa PAO1]
gi|107099671|ref|ZP_01363589.1| hypothetical protein PaerPA_01000689 [Pseudomonas aeruginosa PACS2]
gi|218893759|ref|YP_002442628.1| glutamate racemase [Pseudomonas aeruginosa LESB58]
gi|296391483|ref|ZP_06880958.1| glutamate racemase [Pseudomonas aeruginosa PAb1]
gi|20177990|sp|Q9HVD0|MURI_PSEAE RecName: Full=Glutamate racemase
gi|226722988|sp|B7V0K8|MURI_PSEA8 RecName: Full=Glutamate racemase
gi|9950917|gb|AAG08049.1|AE004880_5 glutamate racemase [Pseudomonas aeruginosa PAO1]
gi|218773987|emb|CAW29802.1| glutamate racemase [Pseudomonas aeruginosa LESB58]
Length = 265
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++
Sbjct: 7 AVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+
Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTLKS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189
+ L+ + S + L R+E Y + + + I +GC
Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTHYP + + +L P + +D ++AR RV A
Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225
Query: 250 LFLSGK 255
L SG+
Sbjct: 226 LLASGQ 231
>gi|116052807|ref|YP_793124.1| glutamate racemase [Pseudomonas aeruginosa UCBPP-PA14]
gi|122257182|sp|Q02G12|MURI_PSEAB RecName: Full=Glutamate racemase
gi|115588028|gb|ABJ14043.1| glutamate racemase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 265
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++
Sbjct: 7 AVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+
Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVQLVAMEPAVKPAAAATRNGRVGVLATTGTLKS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189
+ L+ + S + L R+E Y + + + I +GC
Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTHYP + + +L P + +D ++AR RV A
Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225
Query: 250 LFLSGK 255
L SG+
Sbjct: 226 LLASGQ 231
>gi|49082808|gb|AAT50804.1| PA4662 [synthetic construct]
Length = 266
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++
Sbjct: 7 AVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+
Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTLKS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189
+ L+ + S + L R+E Y + + + I +GC
Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTHYP + + +L P + +D ++AR RV A
Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225
Query: 250 LFLSGK 255
L SG+
Sbjct: 226 LLASGQ 231
>gi|298243458|ref|ZP_06967265.1| glutamate racemase [Ktedonobacter racemifer DSM 44963]
gi|297556512|gb|EFH90376.1| glutamate racemase [Ktedonobacter racemifer DSM 44963]
Length = 308
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 13/223 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I ++DSG GGL +L ++R ++P F+Y D PYG + + K+ FL
Sbjct: 44 IGVYDSGAGGLTILTELRKILPHEDFLYYGDTRHCPYGVRSEQEIIELAKQASCFLLERG 103
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ L V+ACNTA + LR +FP + F+G VPA+K AA+ T+ G I + +T
Sbjct: 104 VK-----LIVVACNTASQAALEALRLSFPDVPFVGVVPAVKPAASLTRKGRIGVAATNQA 158
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI + + ++ L + VE+ +++ E++ +
Sbjct: 159 AKSAYLQQLIEDFATGVEVYAQGCSELVTLVEKG----QLQGPEVEATLRQSLHPLLQHD 214
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV+VL CTH+P + R + V +D+ +IARR R LL
Sbjct: 215 IDVLVLGCTHFPALREAIRHIVGPGVQVIDSGAAIARRTRFLL 257
>gi|163803387|ref|ZP_02197262.1| glutamate racemase [Vibrio sp. AND4]
gi|159172791|gb|EDP57636.1| glutamate racemase [Vibrio sp. AND4]
Length = 237
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 41 FIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP 100
++Y+ D+ +PYG E L R+ L + +++++Q + VIACNTA T++ LR+
Sbjct: 3 YLYLFDNEAYPYGELEHDVLINRVNTLVAALVEEHQADIVVIACNTASTIVLPSLRANL- 61
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160
++ +G VPAIK A+ G + +++TPAT+ R YT LI + + L+ S L
Sbjct: 62 AIPVVGVVPAIKPASLLASQG-VGLIATPATVTRQYTRELIRDFAQGKPVELLGSTRLVD 120
Query: 161 RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWL 220
EE G I E+E + K DV VL CTH+PLI Q V +
Sbjct: 121 MAEEKLRGQIIH----IPELESILLPLRHK-VDVAVLGCTHFPLIKDEIHQALGGDVMLI 175
Query: 221 DNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
D+ +IARR R LL +T ++ S P
Sbjct: 176 DSGKAIARRVRALLASDKEQETAEEGSKKIYASASP 211
>gi|330502036|ref|YP_004378905.1| glutamate racemase [Pseudomonas mendocina NK-01]
gi|328916322|gb|AEB57153.1| glutamate racemase [Pseudomonas mendocina NK-01]
Length = 271
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 5/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++R L+P +YVAD PYG +++R + + + +
Sbjct: 16 IGVFDSGVGGLSVLREIRQLLPNETLLYVADSGHVPYGEKSPEYIRERCVVITEHLRAQG 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA ELR + + +G PA+K AAA T+SG++ +L+T TL+
Sbjct: 76 AKAL-VLACNTATAAAAGELRERYADLPIVGMEPAVKPAAAATRSGVVGVLATTGTLKSA 134
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + + + L +E +++ ++ ++G + D +
Sbjct: 135 RFAALLDRFANDVRVITQPCPGLVECIEAG----ELQAPATRELLQGYVAPLLAEGCDTL 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+L CTHYP + + +L P V +D ++AR+ + LL
Sbjct: 191 ILGCTHYPFLRPLLGELVPPSVTLIDTGAAVARQLQRLL 229
>gi|237799730|ref|ZP_04588191.1| glutamate racemase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022585|gb|EGI02642.1| glutamate racemase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 271
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 5/240 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL ++R +P +YVAD PYG + +R + + ++
Sbjct: 16 IFDSGVGGLSVLNEIRQSLPNESLLYVADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 75
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 76 AL-VVACNTATAAGVAHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + S + L +E + +I++ ++ + D I+L
Sbjct: 135 AALLDRFASDVRVVTQPCPGLVELIETG----DLISPQIRQLLQHYVKPLLAAQCDTIIL 190
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYP + + R++ P V +D ++AR+ + LL R + D + SG PD
Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPARDTLYWSSGIPD 250
>gi|313107324|ref|ZP_07793519.1| glutamate racemase [Pseudomonas aeruginosa 39016]
gi|310880021|gb|EFQ38615.1| glutamate racemase [Pseudomonas aeruginosa 39016]
Length = 265
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L++
Sbjct: 7 AVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+
Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGGVGVLATTGTLKS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189
+ L+ + S + L R+E Y + + + I +GC
Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTHYP + + +L P + +D ++AR RV A
Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225
Query: 250 LFLSGK 255
L SG+
Sbjct: 226 LLASGQ 231
>gi|313201826|ref|YP_004040484.1| glutamate racemase [Methylovorus sp. MP688]
gi|312441142|gb|ADQ85248.1| glutamate racemase [Methylovorus sp. MP688]
Length = 297
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 110/212 (51%), Gaps = 6/212 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL +R +P+ IY AD + PYG+ + R + L SD L
Sbjct: 40 VFDSGVGGLSVLAHIRQALPQESLIYAADSMHAPYGSKSQAFIIDRAIQL-SDFLISRGA 98
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA ELRS + ++ +G PA+K AAA T+SG+I +L+T TL+
Sbjct: 99 KALVVACNTATAAAISELRSRY-AIPIIGMEPAVKPAAAATRSGVIGVLATSGTLQSAQF 157
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ SY Q + + + L +E +++ + ++ +E D +VL
Sbjct: 158 AALLESYGRQVRVETQACVGLVECIERG----ELQTADTRQLLEKYIQPLLEAGADTLVL 213
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
CTHYP + + +L+ V +D ++AR+
Sbjct: 214 GCTHYPFVRPLIEELAGPEVAIIDTGAAVARQ 245
>gi|88799058|ref|ZP_01114639.1| glutamate racemase [Reinekea sp. MED297]
gi|88778285|gb|EAR09479.1| glutamate racemase [Reinekea sp. MED297]
Length = 257
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 111/220 (50%), Gaps = 9/220 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL +R L+P+ IYVAD PYG+ + + +R + S L +
Sbjct: 2 IGVFDSGLGGLTVLNSIRSLLPDQALIYVADQAYTPYGDQSEATVTQRSREI-SQWLIEQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA + D+LR F S+ +G P +K AA +++ I IL+T T+
Sbjct: 61 GCQLIVIACNTATAIAIDQLRREF-SVPIVGVEPGVKPAALLSRTRKIGILATENTVASQ 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +++ + LA +E I ++K + C + EG D +
Sbjct: 120 RYQRLIQAFLPNVQVISQGCSGLADAIESDPEAIPAL---LQKYL--CPLLDEG--VDQV 172
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
VL CTHYPLI QL+ +D SD+IA R LP
Sbjct: 173 VLGCTHYPLIRSQIEQLAGARARVIDTSDAIAMEVRRRLP 212
>gi|295093321|emb|CBK82412.1| glutamate racemase [Coprococcus sp. ART55/1]
Length = 255
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 115/231 (49%), Gaps = 12/231 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GG+ VL+ + LMP ++IY D PYG A+ +R + +L K
Sbjct: 5 SIGVFDSGLGGISVLRDIVELMPCENYIYFGDSAHAPYGTKTREAILERSEQCTNFLLAK 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA ++ LR +PS+ +G PA+K A + + +++++TPATL
Sbjct: 65 DVKAI-VIACNTATSVAASTLRQQYPSIPIIGIEPALKPAVLWKEHDKVAVMATPATLAL 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + I+ V LA VE+ GI +EI + ++G K D
Sbjct: 124 PKFHELMKHYSKESDIYPVPCPGLADYVEK---GI-FDGEEITEFLKGLLAPSLEKHVDA 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA-------RRARCLLPRIN 238
IVL CTHYP + V ++++ V + + A R A L P I
Sbjct: 180 IVLGCTHYPFVEKVIQRIAGPDVKIFNGAHGTALELQRRLRIAELLTPSIE 230
>gi|253999852|ref|YP_003051915.1| glutamate racemase [Methylovorus sp. SIP3-4]
gi|253986531|gb|ACT51388.1| glutamate racemase [Methylovorus sp. SIP3-4]
Length = 273
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 108/212 (50%), Gaps = 6/212 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL +R +P+ IY AD + PYG+ + R + L SD L
Sbjct: 16 VFDSGVGGLSVLAHIRQALPQELLIYAADSMHAPYGSKSQAFIIDRAIQL-SDFLISRGA 74
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA ELRS + + +G PA+K AAA T+SG+I +L+T TL+
Sbjct: 75 KALVVACNTATAAAISELRSRY-VIPIIGMEPAVKPAAAATRSGVIGVLATSGTLQSAQF 133
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ SY Q + + + L +E ++K I+ + G D +VL
Sbjct: 134 AALLESYGRQVRVETQACVGLVECIERGELQTAATRQLLEKYIQPLL--EAG--ADTLVL 189
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
CTHYP + + +L+ V +D ++AR+
Sbjct: 190 GCTHYPFVRPLIEELAGPEVAIIDTGAAVARQ 221
>gi|189350987|ref|YP_001946615.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
gi|189335009|dbj|BAG44079.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
Length = 290
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 115/254 (45%), Gaps = 18/254 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++
Sbjct: 21 IGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQR 80
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR
Sbjct: 81 AKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRSA 138
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ + + C L VE G ++ ++G D I
Sbjct: 139 RFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADTI 194
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SG 254
VL CTHYP + R L + +D SD+IAR RV + H L +G
Sbjct: 195 VLGCTHYPFLTPAIRSLIGERMTIVDTSDAIAR-----------QLARVLEQHGLRTPAG 243
Query: 255 KPDIAMRRLMQGFG 268
P A R G G
Sbjct: 244 VPAAAPRFCSTGDG 257
>gi|221198503|ref|ZP_03571549.1| glutamate racemase [Burkholderia multivorans CGD2M]
gi|221208547|ref|ZP_03581548.1| glutamate racemase [Burkholderia multivorans CGD2]
gi|221171538|gb|EEE03984.1| glutamate racemase [Burkholderia multivorans CGD2]
gi|221182435|gb|EEE14836.1| glutamate racemase [Burkholderia multivorans CGD2M]
Length = 292
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 115/254 (45%), Gaps = 18/254 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++
Sbjct: 23 IGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQR 82
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR
Sbjct: 83 AKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRSA 140
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ + + C L VE G ++ ++G D I
Sbjct: 141 RFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRALLDGYLKPMLDAGADTI 196
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SG 254
VL CTHYP + R L + +D SD+IAR RV + H L +G
Sbjct: 197 VLGCTHYPFLTTAIRGLIGERMTIVDTSDAIAR-----------QLARVLEQHGLRTPAG 245
Query: 255 KPDIAMRRLMQGFG 268
P A R G G
Sbjct: 246 MPAAAPRFCSTGDG 259
>gi|145589323|ref|YP_001155920.1| glutamate racemase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047729|gb|ABP34356.1| glutamate racemase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 268
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 6/240 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL +L + +PE ++Y+AD PYG + +R + L + ++
Sbjct: 4 IGVFDSGVGGLSILDEALRQLPENDYLYLADSANAPYGERSSDWIAQRSLALCRYLANEG 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA E+R+ S+ +G P IK AA +TQ+G++ +L+T ATL+
Sbjct: 64 CDAI-VVACNTATAQAIQEIRAQL-SIPVIGVEPGIKPAAMHTQNGIVGVLATEATLKSD 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + S C + L +E + + + K +E I+ G +D I
Sbjct: 122 KFNALLATLPSNCRFIKQAGEGLVPLIESGNANSEETLELLAKHLEP--IQDAG--SDTI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + R+L + +D SD++ R+ + L + T+ F+S K
Sbjct: 178 VLGCTHYPFLRKSIRKLLGDSITLIDTSDAVVRQLKRQLELLQNLSTKKDVGSVTFISSK 237
>gi|221214852|ref|ZP_03587821.1| glutamate racemase [Burkholderia multivorans CGD1]
gi|221165391|gb|EED97868.1| glutamate racemase [Burkholderia multivorans CGD1]
Length = 292
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 115/254 (45%), Gaps = 18/254 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++
Sbjct: 23 IGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQR 82
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR
Sbjct: 83 AKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRSA 140
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ + + C L VE G ++ ++G D I
Sbjct: 141 RFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADTI 196
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SG 254
VL CTHYP + R L + +D SD+IAR RV + H L +G
Sbjct: 197 VLGCTHYPFLTPAIRSLIGERMTIVDTSDAIAR-----------QLARVLEQHGLRTPAG 245
Query: 255 KPDIAMRRLMQGFG 268
P A R G G
Sbjct: 246 VPAAAPRFCSTGDG 259
>gi|161524256|ref|YP_001579268.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
gi|160341685|gb|ABX14771.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
Length = 292
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 115/254 (45%), Gaps = 18/254 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++
Sbjct: 23 IGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQR 82
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR
Sbjct: 83 AKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRSA 140
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ + + C L VE G ++ ++G D I
Sbjct: 141 RFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADTI 196
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SG 254
VL CTHYP + R L + +D SD+IAR RV + H L +G
Sbjct: 197 VLGCTHYPFLTPAIRSLIGERMTIVDTSDAIAR-----------QLARVLEQHGLRTPAG 245
Query: 255 KPDIAMRRLMQGFG 268
P A R G G
Sbjct: 246 VPAAAPRFCSTGDG 259
>gi|330873304|gb|EGH07453.1| glutamate racemase [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 275
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 5/251 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + +FDSG+GGL VL ++R +P+ +Y+AD PYG + +R +
Sbjct: 9 PVLQNCDAPVGVFDSGVGGLSVLNEIRQTLPKESLLYLADCGHIPYGEKTPEFIIERCLI 68
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ +D + V+ACNTA +R +P +G PA+K AA T+SG++ +L
Sbjct: 69 I-ADFFHEQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243
Query: 247 DHALFLSGKPD 257
D + S PD
Sbjct: 244 DTVYWSSDIPD 254
>gi|21672799|ref|NP_660866.1| glutamate racemase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25008820|sp|Q8K924|MURI_BUCAP RecName: Full=Glutamate racemase
gi|21623448|gb|AAM68077.1| glutamate racemase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 256
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 115/214 (53%), Gaps = 3/214 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LI DSGIGGL +L ++ P ++IY+ D+ FPYG ++ L +R + + + I Y
Sbjct: 1 MLIIDSGIGGLSILDNIKKKFPHINYIYMLDNEAFPYGKKKEKFLIERSIKIINAIKKIY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ +IACNTA T+ L+ TF S+ +G +P K A T++ +I +++T +T+
Sbjct: 61 PIKMVIIACNTASTISLPTLKKTF-SIPIIGVLPVFKPAIKITKNKIIGLIATRSTINSL 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y I+ Y + I ++++ LA E+ + I ++KK + I + D I
Sbjct: 120 YIKKTIYKYSLENTIKIIATNELAVIAEKKVRKLSISNIKLKKIFQSWII--LSIKPDTI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+L CTH+ + +Q+ P++++D D+I +
Sbjct: 178 ILGCTHFSFLKKEIQQIFHKPINFIDPGDTIVNK 211
>gi|254244446|ref|ZP_04937768.1| glutamate racemase [Pseudomonas aeruginosa 2192]
gi|126197824|gb|EAZ61887.1| glutamate racemase [Pseudomonas aeruginosa 2192]
Length = 265
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GG VL+++R +P +YVAD+ PYG +++R + +L++
Sbjct: 7 AVGVFDSGVGGFSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQ 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL+
Sbjct: 67 GAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTLKS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEI--EGCFIEKEG 189
+ L+ + S + L R+E Y + + + I +GC
Sbjct: 126 ARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGC------ 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTHYP + + +L P + +D ++AR RV A
Sbjct: 180 ---DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVAR-----------QLERVLSARA 225
Query: 250 LFLSGK 255
L SG+
Sbjct: 226 LLASGQ 231
>gi|309791176|ref|ZP_07685708.1| glutamate racemase [Oscillochloris trichoides DG6]
gi|308226738|gb|EFO80434.1| glutamate racemase [Oscillochloris trichoides DG6]
Length = 256
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 6/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P++ +Y+AD PYG ++ R + +L +
Sbjct: 2 IGVFDSGLGGLSVLRAIRERLPDHDLLYLADSAYCPYGPRPAAEVRVRAQVCANWLLQQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ VIACNTA + D+LR+ P + +G P +K A A +++G + +L+T TLR
Sbjct: 62 ADLI-VIACNTATSAAADQLRAELP-VPVIGLEPGLKPAIAASRNGRVGVLATSGTLRGE 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL+ + S+ I + S L VE + E++ + G + D +
Sbjct: 120 RFMNLVRRFASRAQIFTMPSPDLVGYVEAG----DLNGPEVRAALTGYLEPLRSQGVDAV 175
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VL CTH+P + + +L+ ++ +D ++A +
Sbjct: 176 VLGCTHFPFLRPLIAELAGPEIEIIDTGPAVAEQ 209
>gi|163749944|ref|ZP_02157189.1| glutamate racemase [Shewanella benthica KT99]
gi|161330458|gb|EDQ01437.1| glutamate racemase [Shewanella benthica KT99]
Length = 254
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL 105
D+ PYG + L + L +D + K + VIACNTA TLI LR+ ++ +
Sbjct: 3 DNARLPYGELAEQELISGCVALITDFVQKQSVSMVVIACNTASTLILPSLRAVL-NIPVV 61
Query: 106 GAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY 165
G VPAIK AA +++ I +L+TP T++R YT LI + S C + L ++ L E+
Sbjct: 62 GVVPAIKPAALLSRNKHIGLLATPGTIKRAYTHELIAQFASGCSVELYATSELVMLAEQK 121
Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
A G + + E+ +I +E E D +VL CTH+P++ ++ V LD+ +
Sbjct: 122 AAGDPVTQQEL-AQILSPILESE---LDTLVLGCTHFPILKQEMQEYLGDRVSLLDSGKA 177
Query: 226 IARRARCLLPRINTHQTRVF 245
+A AR L ++ T Q V
Sbjct: 178 VA--ARVLTLKLQTQQEWVL 195
>gi|152993509|ref|YP_001359230.1| glutamate racemase [Sulfurovum sp. NBC37-1]
gi|189030376|sp|A6QBL4|MURI_SULNB RecName: Full=Glutamate racemase
gi|151425370|dbj|BAF72873.1| glutamate racemase [Sulfurovum sp. NBC37-1]
Length = 265
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V+Q + ++ YVAD PYG + + + + + LD++Q
Sbjct: 5 VFDSGLGGLTVVQALSRVIKGADIFYVADTKHAPYGEKTPEQILQYSLNITAYFLDEHQI 64
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ +IACNTA + LR +P + +G P IK A T++ I +L+TPATL
Sbjct: 65 DVLIIACNTATSAAVKTLRERYPELIIIGTEPGIKPALEQTRTKNIGVLATPATLVGEKY 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+L++ ++ + L VE+ G +I+ + +EG D IVL
Sbjct: 125 QDLVNVLSAKEEVTLYEQA-CPGLVEQIENG-EIESGKTHDMLEGWLHPMRENDVDTIVL 182
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
CTHYPL+ H ++ ++ + D+IA+R L
Sbjct: 183 GCTHYPLVAHKIEEIMKREMNLIHTGDAIAKRLLAL 218
>gi|325284166|ref|YP_004256707.1| Glutamate racemase [Deinococcus proteolyticus MRP]
gi|324315975|gb|ADY27090.1| Glutamate racemase [Deinococcus proteolyticus MRP]
Length = 365
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 8/224 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL ++R +P+ F Y+AD PYG D ++ RL + L
Sbjct: 7 IGVFDSGVGGLSVLAELRRALPDERFCYLADTAHLPYGTRSDDDIR-RLTEAAARWLHGR 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA LR TFP +G VPA+K AA T+SG+I +++TPATLR +
Sbjct: 66 GCKALVVACNTASAYGLQHLRGTFPEWPVVGLVPAVKPAALNTRSGVIGVMATPATLRGS 125
Query: 136 YTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + L +S L VE + + + + D
Sbjct: 126 KLQQSVAEWAAPRGVQVMLTTSPKLVPLVERG----EADSPDARALLRQLLRPLAEAGAD 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPR 236
+VL CTHYP + R+ +D+ ++AR+ AR L R
Sbjct: 182 QLVLGCTHYPFLSGSIRREFKDQFTLVDSGGAVARQTARVLAER 225
>gi|330887861|gb|EGH20522.1| glutamate racemase [Pseudomonas syringae pv. mori str. 301020]
Length = 271
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTTEFITERCLTIAGFFREQG 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + + + L +E + +I++ + R D I
Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLLHYVEPLLAARCDTI 188
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYP + + R++ P V +D ++AR+ + LL R + T D + S
Sbjct: 189 ILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGDARDTVYWSSDI 248
Query: 256 PD 257
PD
Sbjct: 249 PD 250
>gi|289627915|ref|ZP_06460869.1| glutamate racemase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647290|ref|ZP_06478633.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. 2250]
gi|330868901|gb|EGH03610.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 271
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERCLTIAGFFREQG 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + + + L +E + +I++ ++ R D I
Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARCDTI 188
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYP + + +++ P V +D ++AR+ + LL R + T D + S
Sbjct: 189 ILGCTHYPFLKPLLQEMLPESVTLIDTGAAVARQLQRLLSRSSLLATGDARDTVYWSSDI 248
Query: 256 PD 257
PD
Sbjct: 249 PD 250
>gi|153847805|ref|ZP_01993956.1| glutamate racemase [Vibrio parahaemolyticus AQ3810]
gi|149744710|gb|EDM56178.1| glutamate racemase [Vibrio parahaemolyticus AQ3810]
Length = 214
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++
Sbjct: 40 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 99
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 100 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 157
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
R YT LI + + L+ S L EE G + DE+K
Sbjct: 158 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELK 202
>gi|330817737|ref|YP_004361442.1| Glutamate racemase [Burkholderia gladioli BSR3]
gi|327370130|gb|AEA61486.1| Glutamate racemase [Burkholderia gladioli BSR3]
Length = 288
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 17/235 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL+ +R +P+ F+YVAD PYG +D + +R + + + +
Sbjct: 18 VGIFDSGLGGLSVLRAVRAQLPDESFVYVADSRHAPYGERDDAFIIERTLAIGEWLAARG 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R T ++ +G P IK A ++S + +L+T ATLR
Sbjct: 78 AKAL-VVACNTATAQSIAVVRETL-AIPLVGVEPGIKPATLASRSRVAGVLATAATLRSA 135
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+LI Y + C L +E G ++ ++G D +
Sbjct: 136 RFESLIERYAADCRFLRQPGHGLVEAIERGDTG----SPALRALLDGYLEPMLAAGADTL 191
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
VL CTHYP + R+L+ + +D S++IAR RV +DH L
Sbjct: 192 VLGCTHYPFLDATIRELTQDRLTLIDTSEAIAR-----------QLARVLEDHGL 235
>gi|124266488|ref|YP_001020492.1| glutamate racemase [Methylibium petroleiphilum PM1]
gi|124259263|gb|ABM94257.1| glutamate racemase [Methylibium petroleiphilum PM1]
Length = 276
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 7/220 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + +P +YVAD PYG ++ + +R L + +L +
Sbjct: 17 IGVFDSGVGGLSVLRALHRHLPHSRLLYVADSGFAPYGERDEGYVVERSRVLTTHLL-RE 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA LR + F+G P IK A A ++SG I +++T TL
Sbjct: 76 GAQLIVVACNTATAAAVRALREEHADVQFVGVEPGIKPAIALSRSGRIGVMATRGTLASD 135
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ S+ +HL + LA +E E+ ++ D +
Sbjct: 136 KFRRLVSSHAQGAQLHLQACAGLAHAIEAG----DANSAEVLALVDRYTAPLREAAVDTV 191
Query: 196 VLACTHYPLIV-HVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTHYP + H+ R L V +D +D++ARR + L+
Sbjct: 192 VLGCTHYPFVAQHIQRALGAG-VQLVDTADAVARRVQQLI 230
>gi|104780103|ref|YP_606601.1| glutamate racemase [Pseudomonas entomophila L48]
gi|166231049|sp|Q1IEW8|MURI_PSEE4 RecName: Full=Glutamate racemase
gi|95109090|emb|CAK13787.1| glutamate racemase [Pseudomonas entomophila L48]
Length = 265
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL VL +++ L+P +YVAD PYG +++RL + + ++
Sbjct: 8 IGVMDSGVGGLSVLAEIQRLLPNETLLYVADSGHVPYGEKSPDYIRQRLRHIAGFLREQG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA +LR+ +P +G PA+K AAA T+SG++ +L+T TL+
Sbjct: 68 AKAM-VLACNTATVATVADLRALYPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSA 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + S + L +E + +++ + G + D +
Sbjct: 127 KFAALLDRFASDVRVITQPCPGLVECIEAG----DLTSPALRQLLAGYVQPLLAQGCDTL 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYP + + + P V +D ++AR+ + LL + + A + S
Sbjct: 183 ILGCTHYPFLRPMLADMVPADVAIIDTGAAVARQLQRLLGERDLLADGPARETAFWTSAD 242
Query: 256 PD 257
PD
Sbjct: 243 PD 244
>gi|298485684|ref|ZP_07003763.1| Glutamate racemase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298159710|gb|EFI00752.1| Glutamate racemase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|330988602|gb|EGH86705.1| glutamate racemase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 271
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERCLTIAGFFREQG 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + + + L +E + +I++ + R D I
Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLLHYVEPLLAARCDTI 188
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYP + + R++ P V +D ++AR+ + LL R + T D + S
Sbjct: 189 ILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGDARDTVYWSSDI 248
Query: 256 PD 257
PD
Sbjct: 249 PD 250
>gi|213967221|ref|ZP_03395370.1| glutamate racemase [Pseudomonas syringae pv. tomato T1]
gi|301381043|ref|ZP_07229461.1| glutamate racemase [Pseudomonas syringae pv. tomato Max13]
gi|302060375|ref|ZP_07251916.1| glutamate racemase [Pseudomonas syringae pv. tomato K40]
gi|302134865|ref|ZP_07260855.1| glutamate racemase [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213928063|gb|EEB61609.1| glutamate racemase [Pseudomonas syringae pv. tomato T1]
Length = 275
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + +FDSG+GGL VL ++R +P +Y+AD PYG + +R +
Sbjct: 9 PVLQNCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERCLI 68
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ +D V+ACNTA +R +P +G PA+K AA T+SG++ +L
Sbjct: 69 I-ADFFHGQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPASVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243
Query: 247 DHALFLSGKPD 257
D + S PD
Sbjct: 244 DTVYWSSDIPD 254
>gi|118594500|ref|ZP_01551847.1| glutamate racemase [Methylophilales bacterium HTCC2181]
gi|118440278|gb|EAV46905.1| glutamate racemase [Methylophilales bacterium HTCC2181]
Length = 267
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 5/217 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GG+ VL+K++ +MP FIYVAD PYG ++KR + ++
Sbjct: 6 SIGVFDSGVGGISVLEKLQQVMPSERFIYVADSKFAPYGQMTSQEIQKRAFIIIDFLIQH 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ L V+ACNTA ELR + ++ +G PA+K A + I IL+T TL+
Sbjct: 66 HSIKLIVVACNTATAACIHELRRNY-NLPIIGMEPAVKPAIFASTKKKIGILATEGTLKS 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
T L+ +Y + ++ + L +E I D K+ I + + DV
Sbjct: 125 TKFIALLENYEGEALFYVQPCIGLVELIERGEISI----DSTKRLIHSYLLPLKKNGVDV 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
IVL CTHY I + V +D ++A A
Sbjct: 181 IVLGCTHYVFIKEIIEDYFSGTVTVIDTGLAVALHAE 217
>gi|330967413|gb|EGH67673.1| glutamate racemase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 275
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 5/232 (2%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ P + +FDSG+GGL VL ++R +P +Y+AD PYG + +R
Sbjct: 7 SQPVNPGCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERC 66
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + +D + V+ACNTA +R +P +G PA+K AA T+SG++
Sbjct: 67 LII-ADFFHEQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVG 125
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 126 VLATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYV 181
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R
Sbjct: 182 EPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSR 233
>gi|28868327|ref|NP_790946.1| glutamate racemase [Pseudomonas syringae pv. tomato str. DC3000]
gi|38257978|sp|Q888B8|MURI_PSESM RecName: Full=Glutamate racemase
gi|28851564|gb|AAO54641.1| glutamate racemase [Pseudomonas syringae pv. tomato str. DC3000]
gi|331018119|gb|EGH98175.1| glutamate racemase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 275
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 5/253 (1%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ P + +FDSG+GGL VL ++R +P +Y+AD PYG + +R
Sbjct: 7 SQPVNPGCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERC 66
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + +D V+ACNTA +R +P +G PA+K AA T+SG++
Sbjct: 67 LII-ADFFHGQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVG 125
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 126 VLATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYV 181
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 182 EPLLAARCDTIILGCTHYPFLKPLLREMLPASVTLIDTGAAVARQLQRLLSRSGLLASGP 241
Query: 245 FDDHALFLSGKPD 257
D + S PD
Sbjct: 242 ARDTLYWSSDIPD 254
>gi|152996178|ref|YP_001341013.1| glutamate racemase [Marinomonas sp. MWYL1]
gi|189030362|sp|A6VX99|MURI_MARMS RecName: Full=Glutamate racemase
gi|150837102|gb|ABR71078.1| glutamate racemase [Marinomonas sp. MWYL1]
Length = 275
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 103/195 (52%), Gaps = 6/195 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG GGL +L + P +Y+ADD PYG+ L+ RL+ + + +
Sbjct: 5 VMDSGAGGLTILNAIHQKHPYLDLVYLADDAFAPYGSKSITQLQDRLVKV-GRFFENEKV 63
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA D LR++ S+ +G PA+K A ++ +++L+TP T
Sbjct: 64 CAIVVACNTATVAAIDALRAS-TSLPIIGVEPAVKPAFRLSKKRRVAVLATPVTAESPRL 122
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ LI + H+ ++SS+ LA ++ + E+++K+ IE E + D +VL
Sbjct: 123 NQLIDLWKEDSHVSIMSSLTLAFDIDAWP----ETEEKVKQTIEQLSQEMLAQNIDTLVL 178
Query: 198 ACTHYPLIVHVFRQL 212
ACTHYPL+ H+F Q+
Sbjct: 179 ACTHYPLVKHLFEQI 193
>gi|332530565|ref|ZP_08406502.1| glutamate racemase [Hylemonella gracilis ATCC 19624]
gi|332039971|gb|EGI76360.1| glutamate racemase [Hylemonella gracilis ATCC 19624]
Length = 276
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 13/232 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I +FDSGIGGL VLQ + +P ++YVAD PYG E + R M + ++
Sbjct: 14 ESPIGVFDSGIGGLSVLQALHAELPHQRYVYVADSGHAPYGEREPQHVIDRTMAVAEYLV 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ V+ACNTA + LR+ P + +G PAIK AA ++++ + +L+T TL
Sbjct: 74 ARHGIQALVVACNTATAIAIHLLRAEHPHLPLVGLEPAIKPAAQHSRNHRVGVLATRGTL 133
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L S Q L LA +E +++E + + G
Sbjct: 134 QSEKFRVLHASLAQQAEFVLQPCDGLAGAIER-------QDEERIATLSAQYASALGPCG 186
Query: 193 ------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTHYPLI R L V +++ +AR+ R +LP I
Sbjct: 187 TAPGCIDTVVLGCTHYPLITSQLRALLGPDVVMIESGAPVARQTRRVLPHIG 238
>gi|257482010|ref|ZP_05636051.1| glutamate racemase [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331008869|gb|EGH88925.1| glutamate racemase [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 271
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERCLTIAGFFREQG 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + + + L +E + +I++ + R D I
Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPKIRQLLLHYVEPLLAARCDTI 188
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYP + + R++ P V +D ++AR+ + LL R + T D + S
Sbjct: 189 ILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGDARDTVYWSSDI 248
Query: 256 PD 257
PD
Sbjct: 249 PD 250
>gi|320537123|ref|ZP_08037095.1| glutamate racemase [Treponema phagedenis F0421]
gi|320145996|gb|EFW37640.1| glutamate racemase [Treponema phagedenis F0421]
Length = 267
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K Q DSG GGL LQ + L P+ +YVAD+ FPYG + +
Sbjct: 3 KKNEQYQYAFIDSGTGGLPYLQYLHELEPDASMVYVADNAHFPYGKKTKEEVIAFASEMV 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
++ ++ P + ++ACNT + D LR F ++ F+G VP IK A +++ I IL+T
Sbjct: 63 EKLIARFNPEIIIVACNTMSVMALDSLRKKF-TLPFVGTVPGIKLAVKQSRNKRIGILAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ YT LI + S C+ + L +++E+ I +E K I+ + +
Sbjct: 122 ERTVCDPYTERLIEEFGSGCYFEKRADQELIAQIEDGL--ITASYEEKLKAIQPALEQFK 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
TD I+LACTH+ I VF + + +D + +A + P
Sbjct: 180 KANTDSIILACTHFLHIEDVFESAAGSDMQIIDTRSGVIHQALRIAP 226
>gi|320325693|gb|EFW81754.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. B076]
gi|320327388|gb|EFW83402.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. race 4]
gi|330881879|gb|EGH16028.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. race 4]
Length = 271
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERCLTIAGFFREQG 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + + + L +E + +I++ + R D I
Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLLHYVEPLLAARCDTI 188
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYP + + R++ P V +D ++AR+ + LL R + T + + S
Sbjct: 189 ILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGTARETMYWSSDI 248
Query: 256 PD 257
PD
Sbjct: 249 PD 250
>gi|27904976|ref|NP_778102.1| glutamate racemase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|29839498|sp|P59574|MURI_BUCBP RecName: Full=Glutamate racemase
gi|27904374|gb|AAO27207.1| glutamate racemase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 263
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 7/244 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+N I+IFDS +GGL + ++++ P ++IYV D+ FPYG ++ + KR + + S I
Sbjct: 3 LKNYIIIFDSSLGGLSIYKQIKKKFPYMNYIYVCDNKNFPYGEKDEIFILKRSIKIISTI 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
K +L ++ACNT L++ F + +G +P + +A T++ +I +L T T
Sbjct: 63 TKKITTILVILACNTITVTSLTTLKNFF-NFPIIGVIPNLNKARKITKNNIIGLLGTKIT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y N I +V + I L+++ L E+ I IK +E K+
Sbjct: 122 IHHYYIQNHISLFVPKYKIKLLANNTLVKIAEQKIKNQLISTKNIKFILEPLL--KKHNM 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+ + +++ P + +D+ I + +L R + +++ F
Sbjct: 180 PDTLILGCTHFSFLKEEIKKIFPKKIQIIDSKVHIPKNISTILAR----NLKTTNNNIAF 235
Query: 252 LSGK 255
S K
Sbjct: 236 FSKK 239
>gi|70732473|ref|YP_262235.1| glutamate racemase [Pseudomonas fluorescens Pf-5]
gi|68346772|gb|AAY94378.1| glutamate racemase [Pseudomonas fluorescens Pf-5]
Length = 267
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL +++ L+P +Y D PYG +++R +
Sbjct: 7 EAPIGVFDSGVGGLSVLAEIQQLLPHESLLYFGDCGHIPYGEKTPEFIRQRCSLMARFFR 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA +LR +P +G PA+K AAA T+SG++ +L+T TL
Sbjct: 67 EQGAKAL-VLACNTATVAGVADLRRDYPDWPIVGMEPAVKPAAAATRSGVVGVLATTGTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ + G
Sbjct: 126 QSAKFAALLDRFATDVKVVTQPCPGLVEMIENG----DLHSAALRQLLHGYLEPLLAAGC 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D I+L CTHYP + + Q+ P P+ +D ++AR+ + LL
Sbjct: 182 DTIILGCTHYPFLKPLLAQMLPGPISLIDTGAAVARQLQRLL 223
>gi|295698712|ref|YP_003603367.1| glutamate racemase [Candidatus Riesia pediculicola USDA]
gi|291157340|gb|ADD79785.1| glutamate racemase [Candidatus Riesia pediculicola USDA]
Length = 270
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 5/211 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
ILI DSG+GGL V + + +P + YV D+ FPYGN ++ + KR++ L I
Sbjct: 10 ILILDSGLGGLSVYKYLVRKLPNLSYTYVFDNEFFPYGNRKESFIIKRVIRLIDQIQRDR 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ + ++ACNT + + L+ F LG+VP I A +T++ +I +L+T T+
Sbjct: 70 EFEIIILACNTVSVVSINILKDIFSDYIILGSVPEIDVAIQFTKNKVIYVLATKRTIE-- 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y N + Y + IHLVSS L +EE G I +++I ++ + D I
Sbjct: 128 YIRNKVSFYSKEFKIHLVSSSKLVRMIEEKIRGKIILKNKIYSILKNL---SNHQIPDTI 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
VL CTHY I ++ P ++ +D+ +I
Sbjct: 185 VLGCTHYSFISKEIKEAFPKCINLIDSKKNI 215
>gi|253997247|ref|YP_003049311.1| glutamate racemase [Methylotenera mobilis JLW8]
gi|253983926|gb|ACT48784.1| glutamate racemase [Methylotenera mobilis JLW8]
Length = 270
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GG+ VLQ + L+P +YVAD PYGN ++ R + +D L
Sbjct: 12 QRPIAVFDSGVGGISVLQHIHTLLPNEQLLYVADSKYAPYGNKSPAEIQARCTEI-TDFL 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA D +R + ++ +G PA+K AA +++G+I +L+T TL
Sbjct: 71 IANHAKAIVVACNTATAAAIDMMREKY-TLPIIGMEPAVKPAATASRNGIIGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ SY + + + L VE ++K + E
Sbjct: 130 KSAQFAGLLESYGRNVKVVTQACVGLVECVERGELQADATLQLVQKYCQPLLDEG----A 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D IVL CTHYP + + Q+ V +D ++A++
Sbjct: 186 DTIVLGCTHYPFVRPLIEQVVGAQVSLIDTGAAVAKQ 222
>gi|299768328|ref|YP_003730354.1| glutamate racemase [Acinetobacter sp. DR1]
gi|298698416|gb|ADI88981.1| glutamate racemase [Acinetobacter sp. DR1]
Length = 266
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 5/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T T+
Sbjct: 65 AQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +LI +Y + LV + LA ++E K +E+K +E ++
Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTEEVKDYLENILAPLVEQKV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D I+L CTHYP + +++ + ++ S+++ +
Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216
>gi|163815643|ref|ZP_02207016.1| hypothetical protein COPEUT_01818 [Coprococcus eutactus ATCC 27759]
gi|158449280|gb|EDP26275.1| hypothetical protein COPEUT_01818 [Coprococcus eutactus ATCC 27759]
Length = 255
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 113/231 (48%), Gaps = 12/231 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GG+ VL+ + LMP ++IY D PYG A+ +R + +L K
Sbjct: 5 SIGVFDSGLGGISVLRDIVELMPYENYIYFGDSAHAPYGTKTREAILERSEQCTNFLLAK 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA ++ LR +PS+ +G PA+K A + + +++++TPATL
Sbjct: 65 DVKAI-VIACNTATSVAASTLRQQYPSIPIIGIEPALKPAVLWKEHDKVAVMATPATLAL 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + I+ + LA VE GI +EI + + K+ D
Sbjct: 124 PKFHELMKHYSKESDIYPIPCPGLADYVER---GI-FDGEEITEFLRELLAPYLAKKIDA 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA-------RRARCLLPRIN 238
IVL CTHYP + V ++++ V + + A R A L P I
Sbjct: 180 IVLGCTHYPFVEKVIKRIAGPDVKIFNGAHGTALELQRRLRIAELLTPSIE 230
>gi|307822892|ref|ZP_07653122.1| glutamate racemase [Methylobacter tundripaludum SV96]
gi|307735667|gb|EFO06514.1| glutamate racemase [Methylobacter tundripaludum SV96]
Length = 270
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N I +FDSG+GGL VL ++R +P +YVAD PYG+ ++ R + + ++
Sbjct: 5 NPIGVFDSGVGGLSVLHEIRRALPGEDLLYVADSAHAPYGDKSQQFIENRSIAITEFLVS 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + V+ACNTA LRS F SM + PA+K A+ ++SG+I +L+T TL
Sbjct: 65 RNAKAI-VVACNTATGAAITTLRSRF-SMPIIAMEPAVKPASENSKSGVIGVLATSRTLA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L Y + I + L +VE + D+ + +E + + D
Sbjct: 123 SDNFVKLFARYGADVEILGQACPGLVEQVEAG----DLSGDKTRILLERYVLPLLERGAD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+VL CTHYP + + RQ++ V +D++ ++AR+ R
Sbjct: 179 TLVLGCTHYPFLAPLIRQIAGPGVTVIDSAAAVARQLR 216
>gi|162147611|ref|YP_001602072.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786188|emb|CAP55770.1| putative glutamate racemase [Gluconacetobacter diazotrophicus PAl
5]
Length = 224
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ +D P L VIACNTA TL LR + ++ F+G VP IK AA +++ I +L+
Sbjct: 9 YGRAIDALDPDLVVIACNTASTLALPALRERY-TLPFVGCVPPIKWAAELSRTRTIGLLA 67
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+RR Y +L Y C + + LA E G I D I +E++ F +
Sbjct: 68 TRATVRRPYLGDLQRRYAPDCTLLAHGARGLADLAECAFRGHAIATDAIDRELDALFGQP 127
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
G DV+ + CTHY ++ R SP WLD ++++AR+A +L + T
Sbjct: 128 GGAAIDVVGIGCTHYTFLMDRLRAASPPGTIWLDPAEAVARQAATVLGPLGT 179
>gi|167578823|ref|ZP_02371697.1| glutamate racemase [Burkholderia thailandensis TXDOH]
Length = 290
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 6/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++
Sbjct: 15 RSPIGIFDSGLGGLSVLRAVRERLPDEAIVYVADSRHAPYGPRDDAFIIERTLAIGEWLV 74
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 75 AQGAKAL-VIACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R LI + + C + L +E G E++ ++ G
Sbjct: 133 RSARFEALIARHAADCRFICQAGHGLVEAIERGDTG----SPELRAQLAGFLEPMLEAGA 188
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D +VL CTHYP + R ++ + +D SD+IAR+
Sbjct: 189 DTLVLGCTHYPFLDAAIRDVTSSRLHLIDTSDAIARQ 225
>gi|317969725|ref|ZP_07971115.1| glutamate racemase [Synechococcus sp. CB0205]
Length = 278
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 5/213 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL + +++ +P +YVAD PYG+ ++ + + +D L
Sbjct: 6 IGLFDSGVGGLSIWRQVVHALPSESLLYVADQANVPYGHRSADEIQANSLGI-ADYLVAQ 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + + LR FP + LG PA+K A T+SG++ +++TPAT +
Sbjct: 65 GCKAIVLACNTASAVALEPLRQRFPQLPILGLEPAVKPAVQLTRSGVVGVMATPATFQGQ 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ Y + + + LA VE+ ++ + + G D I
Sbjct: 125 LYRATVGRYATAVQVVEQVCVGLAELVEQG----DLEGPDCDARLMGYLQPMLDAGADTI 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
VL CTHYP ++ R+L + LD + ++AR
Sbjct: 181 VLGCTHYPFVIESIRRLVGPAMAVLDPAPAVAR 213
>gi|311087439|gb|ADP67519.1| glutamate racemase [Buchnera aphidicola str. JF99 (Acyrthosiphon
pisum)]
gi|311087930|gb|ADP68009.1| glutamate racemase [Buchnera aphidicola str. JF98 (Acyrthosiphon
pisum)]
Length = 262
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 17/234 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 1 MLIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +
Sbjct: 61 PINIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK------EIEGCFIEKEG 189
YT +I+ Y I ++ + LA E+ G+ + + ++K + C
Sbjct: 120 YTQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWINLPTC------ 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQL--SPWPVDWLDNSDSIARRARCLLPRINTHQ 241
D I+L CTH+ L+ + + V ++D+ + + + L N +Q
Sbjct: 174 --PDTIILGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSYLKTSNVNQ 225
>gi|325474017|gb|EGC77205.1| glutamate racemase [Treponema denticola F0402]
Length = 271
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 120/244 (49%), Gaps = 16/244 (6%)
Query: 13 QNSILIF-DSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
QN +F DSGIGGL L+ ++ L P+ YVAD FPYG + + L I
Sbjct: 5 QNVQYVFIDSGIGGLPYLRHLKELEPQSSCAYVADTKHFPYGEKTLEEVIEYTEDLVKKI 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++K +P + +IACNT LR F + F+G VPAIK AA +++ I++L+T T
Sbjct: 65 IEKLKPSVIIIACNTMTVSALSHLRKKF-EIPFVGTVPAIKPAALTSKNKKIAVLATERT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEIKKEIEGCFIEKEG 189
+ Y NLI + + C + + +L S++E + + K+ I+ +E F + G
Sbjct: 124 VNDIYVQNLIEEFGADCKFFMRADSVLVSKIENTLLSGSEEDKKAGIRPAVE--FFKSAG 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--------RINTHQ 241
TD VL CTH+ + F+ + +D+ D + +A + P ++N Q
Sbjct: 182 --TDTAVLGCTHFLHLRDEFKSECEPDIKIVDSLDGVVNQALKISPPQKSKTDEKLNNIQ 239
Query: 242 TRVF 245
+F
Sbjct: 240 KDIF 243
>gi|330961731|gb|EGH61991.1| glutamate racemase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 271
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 5/219 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 16 VFDSGVGGLSVLNEIRQLLPNESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFHEQGAK 75
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 76 AL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 134
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + S + L +E + +I+ + R D ++L
Sbjct: 135 AALLDRFASDVRVVTQPCPGLVELIESG----DLVSPQIRALLSRYVEPLLAARCDTVIL 190
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
CTHYP + + R++ P V +D ++AR+ + LL R
Sbjct: 191 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSR 229
>gi|302338969|ref|YP_003804175.1| glutamate racemase [Spirochaeta smaragdinae DSM 11293]
gi|301636154|gb|ADK81581.1| glutamate racemase [Spirochaeta smaragdinae DSM 11293]
Length = 261
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I FDSGIGGL LQ +R +P + + Y+AD FPYG L ++
Sbjct: 2 KNTGPIAFFDSGIGGLPYLQWVRKKLPNFSYRYLADRANFPYGEKSIEELGGLIIGSMER 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+++ P + V+ACNTA +LR TF S+ F+G VPAIK AAA + + I +L+T
Sbjct: 62 YIERVDPSIVVVACNTASVTALQKLRDTF-SVPFVGVVPAIKPAAALSCTHTIGLLATKR 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE-DEIKKEIEGCFIEKEG 189
T+ YT NL+ + + + + + VE + + E E+ F EKE
Sbjct: 121 TVEDPYTDNLVRLFADGFQVERFAGVDIVDFVENHLLDAEPHEIREVLAPAVAFFSEKE- 179
Query: 190 KRTDVIVLACTHY 202
D +VL CTH+
Sbjct: 180 --VDTLVLGCTHF 190
>gi|83716465|ref|YP_440215.1| glutamate racemase [Burkholderia thailandensis E264]
gi|167616909|ref|ZP_02385540.1| glutamate racemase [Burkholderia thailandensis Bt4]
gi|257140841|ref|ZP_05589103.1| glutamate racemase [Burkholderia thailandensis E264]
gi|83650290|gb|ABC34354.1| glutamate racemase [Burkholderia thailandensis E264]
Length = 288
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 6/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++
Sbjct: 14 RSPIGIFDSGLGGLSVLRAVRERLPDEAIVYVADSRHAPYGPRDDAFIIERTLAIGEWLV 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 74 AQGAKAL-VVACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 131
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R LI + + C + L +E G E++ ++ G
Sbjct: 132 RSARFEALIARHAADCRFICQAGHGLVEAIERGDTG----SPELRAQLAGFLEPMLEAGA 187
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D +VL CTHYP + R ++ + +D SD+IAR+
Sbjct: 188 DTLVLGCTHYPFLDAAIRDVTSSRLHLIDTSDAIARQ 224
>gi|219682454|ref|YP_002468838.1| glutamate racemase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|254766111|sp|B8D878|MURI_BUCAT RecName: Full=Glutamate racemase
gi|219622187|gb|ACL30343.1| glutamate racemase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|311086275|gb|ADP66357.1| glutamate racemase [Buchnera aphidicola str. LL01 (Acyrthosiphon
pisum)]
Length = 262
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 17/234 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 1 MLIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +
Sbjct: 61 PINIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK------EIEGCFIEKEG 189
YT +I+ Y I ++ + LA E+ G+ + + ++K + C
Sbjct: 120 YTQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWINLPTC------ 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQL--SPWPVDWLDNSDSIARRARCLLPRINTHQ 241
D I+L CTH+ L+ + + V ++D+ + + + L N +Q
Sbjct: 174 --PDTIILGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSCLKTSNVNQ 225
>gi|262280557|ref|ZP_06058341.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262258335|gb|EEY77069.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 266
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNT + + +R+ ++ + PA+K A A T S I++L+T T+
Sbjct: 65 AQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAMTMSKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NLI +Y + LV + LA ++E K E+K ++ ++
Sbjct: 124 KGKNLQNLIETYAQNIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D I+L CTHYP + ++ + L + ++ S+++ +
Sbjct: 180 DTIILGCTHYPFVSNIIQDLVGSNIQIIEPSEAVTAQ 216
>gi|213159142|ref|YP_002321140.1| glutamate racemase [Acinetobacter baumannii AB0057]
gi|213058302|gb|ACJ43204.1| glutamate racemase [Acinetobacter baumannii AB0057]
Length = 266
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T T+
Sbjct: 65 TQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +LI +Y + LV + LA ++E K E+K +E ++
Sbjct: 124 KGQKLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAYTAEVKDYLENILAPLVEQKV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D I+L CTHYP + +++ + ++ S+++ +
Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216
>gi|319794071|ref|YP_004155711.1| glutamate racemase [Variovorax paradoxus EPS]
gi|315596534|gb|ADU37600.1| glutamate racemase [Variovorax paradoxus EPS]
Length = 265
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 15/226 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL +R +P F+Y AD PYG D + +R + ++ ++
Sbjct: 4 VGVFDSGVGGLSVLAALRAELPHERFVYFADTAFAPYGERGDDYVIERSRKVTEQLIAEH 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA T LR+ P++ +G PA+K A A +++G IS+++T TL
Sbjct: 64 GIGALVVACNTATTAAIHLLRAEHPALPIVGLEPALKPAVATSRTGHISVMATRGTLASA 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVE-------EYACGIKIKEDEIKKEIEGCFIEKE 188
+ L S+ + V L +E C + E G F +
Sbjct: 124 KYAALRDSFAGSATVRAVPCDGLVKAIEGLDTEAIATLCARYMAE-------AGPFGDAA 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
G+ D +VL CTHYPL+ ++ +P + ++D +A++ R +L
Sbjct: 177 GE-VDTVVLGCTHYPLVKDQLQRHAPATLRFIDTGAPVAQQTRRVL 221
>gi|169794284|ref|YP_001712077.1| putative glutamate racemase [Acinetobacter baumannii AYE]
gi|215481842|ref|YP_002324024.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|301347985|ref|ZP_07228726.1| glutamate racemase [Acinetobacter baumannii AB056]
gi|301512532|ref|ZP_07237769.1| glutamate racemase [Acinetobacter baumannii AB058]
gi|332850363|ref|ZP_08432697.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332871530|ref|ZP_08440024.1| glutamate racemase [Acinetobacter baumannii 6013113]
gi|169147211|emb|CAM85070.1| putative glutamate racemase [Acinetobacter baumannii AYE]
gi|213986873|gb|ACJ57172.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|332730821|gb|EGJ62131.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332731384|gb|EGJ62676.1| glutamate racemase [Acinetobacter baumannii 6013113]
Length = 266
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T T+
Sbjct: 65 TQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +LI +Y + LV + LA ++E K E+K +E ++
Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAYTAEVKDYLENILAPLVEQKV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D I+L CTHYP + +++ + ++ S+++ +
Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216
>gi|254428102|ref|ZP_05041809.1| glutamate racemase [Alcanivorax sp. DG881]
gi|196194271|gb|EDX89230.1| glutamate racemase [Alcanivorax sp. DG881]
Length = 263
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 128/257 (49%), Gaps = 13/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL + +++R L+P + +YVAD + PYG +H +++R + +++
Sbjct: 7 IGIFDSGIGGLSIARRIRELLPNENLLYVADSIHAPYGEKSEHYIQQRSDAITRFLMENE 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA +LR+ + ++ +G P IK AA ++SG+I +L+T TL+
Sbjct: 67 AKAI-VVACNTATVSAIRQLRADY-TLPIIGVEPGIKPAALQSKSGVIGVLATSQTLKSE 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL + + + L ++E + + + + ++ K D I
Sbjct: 125 SFNNLSRLFSENVRVEIQPCPGLVEQIEALELDSEATQTLVARYVQPLI----QKGADHI 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA----LF 251
VL CTHY + + R+ + V+ ++ ++AR + R+ H A +
Sbjct: 181 VLGCTHYAFLAPLIRRAAGAHVEVVNTDMAVARET---VRRLQMHNLLSDSPQAGSATFW 237
Query: 252 LSGKPDIAMRRLMQGFG 268
S +P +A R+L + +G
Sbjct: 238 SSAEPSLAHRQLSELWG 254
>gi|311086850|gb|ADP66931.1| glutamate racemase [Buchnera aphidicola str. TLW03 (Acyrthosiphon
pisum)]
Length = 262
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 17/234 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 1 MLIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +
Sbjct: 61 PINIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK------EIEGCFIEKEG 189
YT +I+ Y I ++ + LA E+ G+ + + ++K + C
Sbjct: 120 YTQKIIYEYSYSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWINLPTC------ 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQL--SPWPVDWLDNSDSIARRARCLLPRINTHQ 241
D I+L CTH+ L+ + + V ++D+ + + + L N +Q
Sbjct: 174 --PDTIILGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSCLKTSNVNQ 225
>gi|42526956|ref|NP_972054.1| glutamate racemase, putative [Treponema denticola ATCC 35405]
gi|41817271|gb|AAS11965.1| glutamate racemase, putative [Treponema denticola ATCC 35405]
Length = 271
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 8/226 (3%)
Query: 13 QNSILIF-DSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
QN +F DSGIGGL L+ ++ L P+ YVAD FPYG + + L I
Sbjct: 5 QNVQYVFIDSGIGGLPYLRHLKELEPQSSCAYVADTKHFPYGEKTLEDVIEYTEDLVKKI 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++K +P + +IACNT LR F + F+G VPAIK AA +++ I++L+T T
Sbjct: 65 IEKLKPSVIIIACNTMTVSALSHLRKKF-EIPFVGTVPAIKPAALTSKNKKIAVLATERT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEIKKEIEGCFIEKEG 189
+ Y NLI + + C + + +L S++E + + K+ I+ +E F + G
Sbjct: 124 VNDIYVQNLIEEFGADCKFFMRADSVLVSKIENTLLSGSEEDKKAGIRPAVE--FFKSAG 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
TD VL CTH+ + F+ + +D+ D + +A + P
Sbjct: 182 --TDTAVLGCTHFLHLRDEFKSECEPDIKIVDSLDGVVNQALKISP 225
>gi|301301177|ref|ZP_07207333.1| glutamate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851176|gb|EFK78904.1| glutamate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 256
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 7/223 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K L F + L Y
Sbjct: 9 IGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQK-LSFEKVEHLLSY 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP TL+
Sbjct: 68 NCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPLTLKEK 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
++L++ YV++ I + + L +E E ++K + K +D I
Sbjct: 128 KFNDLMNKYVTEADIRKIPAPDLVEFIESGDVDSPELETYLRKLLNPY------KDSDSI 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
VL CTH+P V +++ +D + AR + LL + N
Sbjct: 182 VLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSN 224
>gi|302877351|ref|YP_003845915.1| glutamate racemase [Gallionella capsiferriformans ES-2]
gi|302580140|gb|ADL54151.1| glutamate racemase [Gallionella capsiferriformans ES-2]
Length = 266
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM----FLFS 69
+I +FDSG+GGL VL+ +R L+P IYVAD PYG+ +++R + FL S
Sbjct: 6 GAIGVFDSGVGGLSVLRHIRQLLPNERLIYVADSAHVPYGDKSARYIEQRSIELTRFLIS 65
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D VIACNTA LR F S +G PA+K A A T++G++ +L+T
Sbjct: 66 QGADAI-----VIACNTATAAAAATLRRDF-SCPIIGMEPAVKPAVAATKNGIVGVLATI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL S L+ Y I L +VE + + +++ ++G
Sbjct: 120 GTLESARFSALLERYAGNVTIVTQGCPGLVEQVERGDLTGPLTRELVERYTTPLL--EQG 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
D ++L CTHYP + + R ++ + +D +++AR LL R+ T
Sbjct: 178 --ADTLILGCTHYPFLAGLIRDIAGQDIQLIDTGEAVARH---LLRRLQTE 223
>gi|91787921|ref|YP_548873.1| glutamate racemase [Polaromonas sp. JS666]
gi|91697146|gb|ABE43975.1| glutamate racemase [Polaromonas sp. JS666]
Length = 281
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 107/235 (45%), Gaps = 17/235 (7%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSGIGGL +L+ +R +P +F+YVAD PYG ED + R + +L
Sbjct: 4 QAIGVFDSGIGGLSILKALRAELPHENFVYVADSGHAPYGEREDCFVVARSRAITRHLLT 63
Query: 74 KYQPVLS--VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + VIACNTA LR P++ +G PA+K A +++ I +++T T
Sbjct: 64 QQHVKVKALVIACNTATAAAIHLLREEHPNLPIIGVEPALKPATLLSRTRRIGVMATRGT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED-----EI------KKEI 180
L L S Q L LA +E GI K D EI
Sbjct: 124 LASARFKRLRDSLAGQAEFVLQPCDGLADAIER---GIDDKADPGSATEILAACAHHTRA 180
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
G F EG+ D +VL CTHYP R L V +LD +AR+ R LP
Sbjct: 181 MGPFGLNEGE-IDTLVLGCTHYPFASEHLRALLGPHVQFLDTGAPVARQTRLRLP 234
>gi|110835225|ref|YP_694084.1| glutamate racemase [Alcanivorax borkumensis SK2]
gi|110648336|emb|CAL17812.1| glutamate racemase [Alcanivorax borkumensis SK2]
Length = 263
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 10/255 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL + +++R L+P + +YVAD V PYG +H +++R + ++D
Sbjct: 7 IGVFDSGIGGLSIARRIRELLPHENLLYVADSVHAPYGEKAEHYIQQRADTITRFLIDNN 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA +LR+ + ++ +G P IK AA ++SG+I +L+T TL+
Sbjct: 67 AKAI-VVACNTATVSAIRQLRADY-TLPIIGVEPGIKPAALKSKSGVIGVLATSQTLKSE 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL + + + L ++E + + + + + IEK D I
Sbjct: 125 SFNNLSRLFSESVCVEIQPCPGLVEQIEVLDLDSEKTQALVARYV-APLIEKGA---DHI 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHY + V R+++ + ++ ++AR L N T V F S
Sbjct: 181 VLGCTHYAFLAPVIRRIAGAGIQVVNTDIAVARETLRRLQNANRLSTSVAPGQMAFWSSA 240
Query: 256 ----PDIAMRRLMQG 266
D ++RL G
Sbjct: 241 ANELADQQIKRLWDG 255
>gi|320335009|ref|YP_004171720.1| glutamate racemase [Deinococcus maricopensis DSM 21211]
gi|319756298|gb|ADV68055.1| Glutamate racemase [Deinococcus maricopensis DSM 21211]
Length = 279
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 8/222 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL +R +P ++Y+AD PYG D ++ L + L +
Sbjct: 12 IGVFDSGVGGLSVLAALRRELPNEDYLYLADTAHVPYGPRADDDIRD-LTGRAARWLFDH 70
Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA LR+ + +G VPA+K A A T+SG+I +L+TPATLR
Sbjct: 71 GAKSVVVACNTASAFSLAPLRAWAGDARPVVGLVPAVKPAVAATRSGVIGVLATPATLRG 130
Query: 135 TYTSNLIHSYVSQCHIHLV--SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+++ + + + +V + + L VE +++ ++ G
Sbjct: 131 ALLQDVVAQHATPRGVRVVPCADLRLVPLVESGLADAPETLAALRETLDPVV----GAGA 186
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYP + R L + D+ +ARR R +L
Sbjct: 187 DALVLGCTHYPFLTSALRHLYGPDLALFDSGAGVARRTRAVL 228
>gi|332291481|ref|YP_004430090.1| glutamate racemase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169567|gb|AEE18822.1| glutamate racemase [Krokinobacter diaphorus 4H-3-7-5]
Length = 268
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 22/261 (8%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-------KKRLM 65
+ +I +FDSGIGG + +++ +P + IY+AD PYG + ++L+
Sbjct: 4 KGNIGLFDSGIGGTSIWKEVVTHLPYENTIYLADSKHAPYGAKSKEEIIALSVKNTEKLI 63
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
L + I+ V+ACNTA T D LR + + F+G PAIK AA +++ I I
Sbjct: 64 QLGAKII--------VVACNTATTNAIDYLRKNY-DIPFIGIEPAIKPAALNSKNKTIGI 114
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T TL T + + + V L +E E + KE+ ++
Sbjct: 115 LATKGTLNSTLFQDTSEKWTQGTKVIEVIGEGLVPLIERGDL-----ESSVLKELLKSYV 169
Query: 186 EKE-GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
++ D +VL C+HYP ++ + +L P V +D+ ++AR+ + +L I +T
Sbjct: 170 APMITQKIDYLVLGCSHYPYLIPLLTELLPEEVTIIDSGLAVARQTKSVLTEIKALETAT 229
Query: 245 FDDHALFLSGKPDIAMRRLMQ 265
+H LF +G P I + L++
Sbjct: 230 TGNHQLFTNGDPSILKKVLVR 250
>gi|219681899|ref|YP_002468285.1| glutamate racemase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|257471604|ref|ZP_05635603.1| glutamate racemase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
pisum)]
gi|254766110|sp|B8D9X6|MURI_BUCA5 RecName: Full=Glutamate racemase
gi|219624742|gb|ACL30897.1| glutamate racemase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
Length = 262
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 116/234 (49%), Gaps = 17/234 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 1 MLIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +
Sbjct: 61 PINIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK------EIEGCFIEKEG 189
YT I+ Y I ++ + LA E+ G+ + + ++K + C
Sbjct: 120 YTQKTIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWINLPTC------ 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQL--SPWPVDWLDNSDSIARRARCLLPRINTHQ 241
D I+L CTH+ L+ + + V ++D+ + + + L N +Q
Sbjct: 174 --PDTIILGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSYLKTSNVNQ 225
>gi|167565061|ref|ZP_02357977.1| glutamate racemase [Burkholderia oklahomensis EO147]
Length = 290
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 6/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + + +
Sbjct: 18 IGIFDSGLGGLSVLRAVRARLPDEALVYVADSRHAPYGPRDDAFIVERTLAIGEWLAAQG 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR T
Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRST 135
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI + C + L VE G E++ + G D +
Sbjct: 136 RFEALIARHADDCRFICQAGHGLVEAVERGDTG----SPELRALLTGYLEPMLAAGADTL 191
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VL CTHYP + R ++ + +D SD+IAR+
Sbjct: 192 VLGCTHYPFLDAAIRDVASDRLHLIDTSDAIARQ 225
>gi|15617147|ref|NP_240360.1| glutamate racemase [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|11386924|sp|P57619|MURI_BUCAI RecName: Full=Glutamate racemase
gi|25291667|pir||F84994 glutamate racemase (EC 5.1.1.3) [imported] - Buchnera sp. (strain
APS)
gi|10039212|dbj|BAB13246.1| glutamate racemase [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
Length = 262
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 1 MLIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +
Sbjct: 61 PINVVVIACNTISTVALSILRKKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK------EIEGCFIEKEG 189
YT +I+ Y I ++ + LA E+ G+ + + ++K + C
Sbjct: 120 YTQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWINLPTC------ 173
Query: 190 KRTDVIVLACTHYPLI 205
D I+L CTH+ L+
Sbjct: 174 --PDTIILGCTHFSLL 187
>gi|121595188|ref|YP_987084.1| glutamate racemase [Acidovorax sp. JS42]
gi|120607268|gb|ABM43008.1| glutamate racemase [Acidovorax sp. JS42]
Length = 291
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 11/229 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VLQ +R +P HF+Y+AD PYG+ + A ++ + L ++
Sbjct: 10 IGVFDSGIGGLSVLQALRHELPHEHFVYLADSGNAPYGDAKGDAFVQQRTLAIARWLREH 69
Query: 76 QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + V+ACNTA ++LR+ P + +G PA+K AAA +Q+ + +L+T T+
Sbjct: 70 HGIKALVVACNTATAAAVEQLRAALPDLPAIGVEPALKPAAASSQTHHVGVLATRGTVGS 129
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE--------YACGIKIKEDEIK-KEIEGCFI 185
L + + + LA +E+ A KI+ ++ G F
Sbjct: 130 ARFQRLRDGHSAGTRFSVQPCDGLARAIEQSTEEPLPAAASMAKIEALCVQYTGALGTFG 189
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
K G+ D +VL CTHY + R L V +D +AR+ R +L
Sbjct: 190 LKTGE-IDTLVLGCTHYVFAKDMLRALVGPDVQIIDTGAPVARQTRRIL 237
>gi|296132631|ref|YP_003639878.1| glutamate racemase [Thermincola sp. JR]
gi|296031209|gb|ADG81977.1| glutamate racemase [Thermincola potens JR]
Length = 270
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 6/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ VL+ M L+P FIY AD + PYG ++ + + + ++DK
Sbjct: 10 IGIFDSGVGGISVLKDMVQLLPNEKFIYYADSLNAPYGTKDNETIARLSRNVARFLVDKG 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA + ++LR+ + +G PA+K A + G + +++TP TL++
Sbjct: 70 IKTL-VVACNTATAVAINQLRAEL-DIPVIGMEPAVKPAVELGKEGKVLVMATPVTLKQE 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+H Y + + L VE+ GI + EIK+ + + + V+
Sbjct: 128 KFNKLLHRYDEHSRVIPLPCPGLVELVEK---GI-TQGKEIKEYLSKLLANIQRDQIAVV 183
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VL CTHY + +Q P + +D + A+R
Sbjct: 184 VLGCTHYVFVRDTIKQFFPSQIPVIDGNCGTAKR 217
>gi|300214554|gb|ADJ78970.1| Glutamate racemase [Lactobacillus salivarius CECT 5713]
Length = 256
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 13/226 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K L F + L Y
Sbjct: 9 IGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQK-LSFEKVEHLLSY 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP TL+
Sbjct: 68 NCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPLTLKEK 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK---EGKRT 192
++L++ YV++ I + + L +E D E+E +++K K +
Sbjct: 128 KFNDLMNKYVTKADIRKIPAPDLVEFIESG--------DVDSPELE-TYLQKLLSPYKDS 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D IVL CTH+P V +++ +D + AR + LL + N
Sbjct: 179 DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSN 224
>gi|227890834|ref|ZP_04008639.1| glutamate racemase [Lactobacillus salivarius ATCC 11741]
gi|227867243|gb|EEJ74664.1| glutamate racemase [Lactobacillus salivarius ATCC 11741]
Length = 256
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 13/226 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K L F + L Y
Sbjct: 9 IGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQK-LSFEKVEHLLSY 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP TL+
Sbjct: 68 NCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPLTLKEK 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK---EGKRT 192
++L++ YV++ I + + L +E D E+E +++K K +
Sbjct: 128 KFNDLMNKYVTKADIRKIPAPDLVEFIESG--------DVDSPELE-TYLQKLLSPYKDS 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D IVL CTH+P V +++ +D + AR + LL + N
Sbjct: 179 DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSN 224
>gi|222111527|ref|YP_002553791.1| glutamate racemase [Acidovorax ebreus TPSY]
gi|221730971|gb|ACM33791.1| glutamate racemase [Acidovorax ebreus TPSY]
Length = 291
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 11/229 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VLQ +R +P HF+Y+AD PYG+ + A ++ + L ++
Sbjct: 10 IGVFDSGIGGLSVLQALRHELPHEHFVYLADSGNAPYGDAKGDAFVQQRTLAIARWLREH 69
Query: 76 QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + V+ACNTA ++LR+ P + +G PA+K AAA +Q+ + +L+T T+
Sbjct: 70 HGIKALVVACNTATAAAVEQLRAALPDLPAIGVEPALKPAAASSQTHHVGVLATRGTVGS 129
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEE--------YACGIKIKEDEIK-KEIEGCFI 185
L + + + LA +E+ A KI+ ++ G F
Sbjct: 130 ARFQRLRDGHSAGTRFSVQPCDGLARAIEQSTEEPLPAAASMAKIEALCVQYTGALGTFG 189
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
K G+ D +VL CTHY + R L V +D +AR+ R +L
Sbjct: 190 LKTGE-IDTLVLGCTHYVFAKDMLRALVGPDVQIIDTGAPVARQTRRIL 237
>gi|238028090|ref|YP_002912321.1| glutamate racemase [Burkholderia glumae BGR1]
gi|237877284|gb|ACR29617.1| Glutamate racemase [Burkholderia glumae BGR1]
Length = 286
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 17/233 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL+ R +P+ F+YVAD PYG +D + +R + + + +
Sbjct: 18 IFDSGLGGLSVLRAARAHLPDEAFVYVADSRYAPYGERDDAFIIERTLAIGEWLAARGAK 77
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA +R T ++ +G P IK AA + S + +L+T ATLR
Sbjct: 78 AL-VVACNTATAQSIAVVRETL-AIPLIGVEPGIKPAALASTSRVAGVLATAATLRSARF 135
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + C L L +E G ++ + G D +VL
Sbjct: 136 EALIARHAGDCRFLLQPGHGLVQAIERGDTG----SAGLRTLLAGYLEPMLAAGADTLVL 191
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
CTHYP + R+L+ + +D ++IAR RV D+H L
Sbjct: 192 GCTHYPFLDATIRELTQNRLTLVDTGEAIAR-----------QLARVLDEHGL 233
>gi|71733288|ref|YP_273271.1| glutamate racemase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71553841|gb|AAZ33052.1| glutamate racemase [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 271
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 5/242 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + + ++
Sbjct: 14 VAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERCLTIAGFFREQG 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 74 AKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSA 132
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + + + L +E + +I++ + D I
Sbjct: 133 RFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRRLLLHYVEPLLAACCDTI 188
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYP + + R++ P V +D ++AR+ + LL R + T + + S
Sbjct: 189 ILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGTARETMYWSSDI 248
Query: 256 PD 257
PD
Sbjct: 249 PD 250
>gi|254497879|ref|ZP_05110644.1| glutamate racemase [Legionella drancourtii LLAP12]
gi|254352877|gb|EET11647.1| glutamate racemase [Legionella drancourtii LLAP12]
Length = 270
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 8/227 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q ++ +FDSG+GGL VL+ ++ +P FIY+ D PYG +K+ M + ++
Sbjct: 5 QLAVGVFDSGMGGLTVLRALKESLPHESFIYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+++ L VIACNTA T L+S P M LG V P A A T++ +++L+T T
Sbjct: 65 ERHIKAL-VIACNTATTAALPYLQSMLPDMPILGVVIPGASAAVAATKNQRVAVLATETT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ LI + Q I + +L + EE +I + +K ++G E
Sbjct: 124 IASKAYQELIARQLPQAVISTRACSVLVALAEEGMINNQIAREALKHYLDGFNDE----- 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +L CTH+P+ + L P + +D++ + A LL + N
Sbjct: 179 -DTFLLGCTHFPVFKSLLVDLLPEGIAVVDSAHATANSLYSLLQKQN 224
>gi|312958853|ref|ZP_07773372.1| Glutamate racemase [Pseudomonas fluorescens WH6]
gi|311286623|gb|EFQ65185.1| Glutamate racemase [Pseudomonas fluorescens WH6]
Length = 264
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 5/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL +++ L+P +YVAD PYG + +R + +K
Sbjct: 7 IGVFDSGVGGVSVLDEIQRLLPHESLLYVADGGHIPYGEKTPAFILERSRRVAEFFREKG 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA +LR FP +G PA+K AAA T++G++ +L+T TL+
Sbjct: 67 AKAF-VIACNTATVAAVADLRQDFPDWPLVGMEPAVKPAAAATRAGVVGVLATTGTLQSA 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + + + L +E + ++ ++G D I
Sbjct: 126 KFAALLDRFATDVRVITQPCPGLVELIETG----DLTSPALRTLLQGYIDPLLSAGCDTI 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+L CTHYP + + Q+ P + +D ++AR+ + LL
Sbjct: 182 ILGCTHYPFLKPLLAQMLPSSITLIDTGAAVARQLKRLL 220
>gi|291612568|ref|YP_003522725.1| glutamate racemase [Sideroxydans lithotrophicus ES-1]
gi|291582680|gb|ADE10338.1| glutamate racemase [Sideroxydans lithotrophicus ES-1]
Length = 268
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSG+GGL VLQ +R +P IYVAD PYG+ ++ R + + ++
Sbjct: 5 GAIGVFDSGVGGLSVLQHIRHTLPHERLIYVADSGHVPYGDKSPAFIEARALAITRFLIS 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNTA LR F M L PA+K A A TQS ++ +L+T TL
Sbjct: 65 QGAEAI-VIACNTATAAAAHTLRVKFNKMPILAMEPAVKPAIAVTQSRVVGVLATVGTLE 123
Query: 134 RTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ Y + I L +VE ++ ++ +E K
Sbjct: 124 SARFAALLEKYGGWKVKIETQGCPGLVEQVERG----ELHSARTRELVERYTAPLLRKGA 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR----RARC-LLPRINTHQTRVFDD 247
D ++L CTHYP + + R++ + +D ++AR R + L PRI + F
Sbjct: 180 DTLILGCTHYPFLAPLIREIVGDNITLIDTGAAVARHLQHRVKAELPPRIVGEASERF-- 237
Query: 248 HALFLSGKPDIAMR 261
F SG P+ A R
Sbjct: 238 ---FTSGDPEQASR 248
>gi|114331729|ref|YP_747951.1| glutamate racemase [Nitrosomonas eutropha C91]
gi|114308743|gb|ABI59986.1| glutamate racemase [Nitrosomonas eutropha C91]
Length = 268
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 9/232 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSGIGGL V +K+R L+P +YVAD + PYG D+ + +R M ++ L +
Sbjct: 14 IFDSGIGGLSVARKIRELLPSEDMVYVADSLHAPYGEKSDNYIFQR-MGAVTEFLLARKA 72
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA T LR+ +P + +G P IK AA T +G+I +L+TP TL+
Sbjct: 73 KAVVVACNTATTAAISRLRACYP-IPIVGVEPGIKPAALSTHTGVIGVLATPRTLQTNSF 131
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L + I + L +++E + D+ ++ K D IVL
Sbjct: 132 TALAERFARNVRIEIQPCPDLVTKIE----ALNFNSDQTIALLKQYISPLLDKGADTIVL 187
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
CTHY + + +++ + + ++A+ + R+++ DHA
Sbjct: 188 GCTHYNHLSELISKVAGENISIIKTDAAVAKE---VARRLSSGGLLAGGDHA 236
>gi|299529106|ref|ZP_07042554.1| glutamate racemase [Comamonas testosteroni S44]
gi|298722862|gb|EFI63771.1| glutamate racemase [Comamonas testosteroni S44]
Length = 284
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 13/227 (5%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA-LKKRLMFLFSDILDKYQPVLSV 81
+GGL VLQ +R +P F+Y+AD PYG+ A +++R + + +L+++ + V
Sbjct: 1 MGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAIAKYLLEQHDIKILV 60
Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
IACNTA + LR P + +G PAIK A+ +Q+ + +++T T+ + L+
Sbjct: 61 IACNTATAAAVELLRERLPQLPVIGVEPAIKPASFSSQTHHVGVMATRGTISSQRVARLV 120
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------GCFIEKEGKR 191
+ + HL + LA +E+ + + ED EI G F K G+
Sbjct: 121 SEHGQRAEFHLQACDGLARAIEQ-STEQALPEDASATEIRALCAKYTSALGSFGLKTGQ- 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTHY + R L + LD +AR+ R +L + N
Sbjct: 179 MDTLVLGCTHYVFVKDDLRALLGPDIQLLDTGAPVARQTRRMLEQRN 225
>gi|147677257|ref|YP_001211472.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
gi|146273354|dbj|BAF59103.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
Length = 265
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 114/246 (46%), Gaps = 7/246 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I FDSG+GGL V+++ R L+P FIY AD PYG+ L+KR F D L
Sbjct: 5 GPIGFFDSGVGGLSVMKEARALLPSEDFIYFADSAYCPYGDKPPEVLRKR-AFAICDFLL 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNT D++R + S+ +G PA+K A + T++G I +L+T TL
Sbjct: 64 ERGTRLIVIACNTISIAALDDVRR-YVSVPVVGIEPAVKPAVSATRNGKIGVLATGVTLA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ Y ++ L VE + E + +E + D
Sbjct: 123 GERFNALVRRYGRGIEVYTQPCPGLVELVESG----NWERPEAEIMLERYLGPLLARGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFL 252
+VL CTHYP + + +L+ V +D ++AR+ + +L + F
Sbjct: 179 TVVLGCTHYPFLRPLVEKLAGGGVTVIDTGRAVARQIKNVLEASGLASGKTAPGTERFFT 238
Query: 253 SGKPDI 258
S +P++
Sbjct: 239 SARPEV 244
>gi|90961813|ref|YP_535729.1| glutamate racemase [Lactobacillus salivarius UCC118]
gi|90821007|gb|ABD99646.1| Glutamate racemase [Lactobacillus salivarius UCC118]
Length = 256
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 7/223 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K L F + L Y
Sbjct: 9 IGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQK-LSFEKVEHLLSY 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP TL+
Sbjct: 68 NCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPLTLKEK 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
++L++ YV++ I + + L +E + E++ + K +D I
Sbjct: 128 KFNDLMNKYVTEADIRKIPAPDLVEFIESG----DVDSPELETYLRNLL--SPYKDSDSI 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
VL CTH+P V +++ +D + AR + LL + N
Sbjct: 182 VLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSN 224
>gi|150026137|ref|YP_001296963.1| glutamate racemase [Flavobacterium psychrophilum JIP02/86]
gi|149772678|emb|CAL44161.1| Glutamate racemase [Flavobacterium psychrophilum JIP02/86]
Length = 259
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 8/255 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I +FDSGIGG + +++ L+P + IY+AD PYG + + L F D L
Sbjct: 4 NNPIGLFDSGIGGTSIWKEIHQLLPNENTIYLADSKNAPYGKKSKQEIIE-LCFKNIDYL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA T ++R + + +G PAIK AA TQ+ I IL+T T+
Sbjct: 63 VSQNCKMIVVACNTATTNAIIQIREKY-KIPIIGIEPAIKPAANKTQTQTIGILATKGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + SY +I ++ I VE G +I+ E+ K +
Sbjct: 122 NSELFNKQVESYT---NIKIIE-QIGYGLVELIENG-EIESPEMTKLLTSYLEPMIKANI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL C+HYP +V +++ P + +D+ ++AR+ + +L + N T + +F
Sbjct: 177 DYLVLGCSHYPYLVPAIKKIIPENIKIIDSGQAVARQTKTILEKNNLLNTTTKNSQQIFY 236
Query: 253 SGKPDIAMRRLMQGF 267
+ ++ ++ GF
Sbjct: 237 ANSNPTVLKNIL-GF 250
>gi|305664609|ref|YP_003860896.1| glutamate racemase [Maribacter sp. HTCC2170]
gi|88708626|gb|EAR00862.1| glutamate racemase [Maribacter sp. HTCC2170]
Length = 262
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 118/228 (51%), Gaps = 20/228 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG + +++ +P + +Y AD PYG + +L +++L
Sbjct: 6 IGIFDSGVGGTSIWKEINVQLPNENTVYFADSENAPYGEKSSEEII-QLSVKNTELLLGK 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA T D LR + + F+G PAIK AA ++S + +L+T TL
Sbjct: 65 GCKLIVVACNTATTNAIDHLRKNY-DVPFIGIEPAIKPAALQSKSKTVGVLATKGTL--- 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIK-KEIEGCFIEKEG--- 189
TS+L HS S+ H + ++ +E+ G+ I+E +I KE G
Sbjct: 121 -TSSLFHS-TSENHTNGIT------VIEQVGKGLVPLIEEGKINSKETRELLFSYIGPML 172
Query: 190 -KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
K D +VL CTHYP ++ V L P V +D+ +++AR+AR +L +
Sbjct: 173 EKGIDYLVLGCTHYPYLIPVLNDLIPDHVKIIDSGEAVARQARAVLEQ 220
>gi|87118931|ref|ZP_01074829.1| Glutamate racemase [Marinomonas sp. MED121]
gi|86165322|gb|EAQ66589.1| Glutamate racemase [Marinomonas sp. MED121]
Length = 290
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 120/232 (51%), Gaps = 14/232 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I I DSG GGL VL + Y + Y ADD PYG+ +++R++ + ++DK
Sbjct: 14 IGILDSGAGGLTVLAALIKSNKAYDYYYFADDAFAPYGSLSIDKIQQRVLSICDFLIDKG 73
Query: 76 QPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L VIACNTA L++ + ++ +G PAIK A+ G++ +L+TP T
Sbjct: 74 VTSL-VIACNTATLEVIHLVRSCPKVIEKNILIVGIEPAIKPASLLDYQGVVCVLATPIT 132
Query: 132 LRRTYTSNLIH----SYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+ LI+ + VSQ H ++S +LA+ ++ G + D + I E
Sbjct: 133 CQSNRLQALINHASLNRVSQSSRYHCIASEVLANAIDALP-GSGSRVDLELQRIRAIMAE 191
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ + ++VLACTHYPLI +F L +PV L+ SD++ARR LP ++
Sbjct: 192 LDSR---ILVLACTHYPLIKSMFEGLFDYPVQILEPSDAVARRVIDCLPSMH 240
>gi|325123931|gb|ADY83454.1| putative glutamate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 266
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 5/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNT + + +R+ ++ + PA+K A A TQ+ I++L+T T+
Sbjct: 65 AQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQTKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +LI +Y + LV + LA ++E K E+K +E ++
Sbjct: 124 KGKNLKSLIETYAQHIKVSLVPCIGLAEKIETG----KAHTVEVKDYLENILAPLVEQKV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D I+L CTHYP + + +++ + ++ S+++ +
Sbjct: 180 DTIILGCTHYPFVSDMIQEIVGRDIQIIEPSEAVTAQ 216
>gi|237747808|ref|ZP_04578288.1| glutamate racemase [Oxalobacter formigenes OXCC13]
gi|229379170|gb|EEO29261.1| glutamate racemase [Oxalobacter formigenes OXCC13]
Length = 283
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 15/232 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I IFDSG+GGL VL+ + +P+ +Y AD PYG+ + + +R FL +D
Sbjct: 13 KASGPIGIFDSGVGGLSVLRHIATQLPDEELVYFADSGYAPYGDKPEEFVVER-SFLITD 71
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K V+ACNTA + LR +P + +G P +K AAA T +G + +++T
Sbjct: 72 FLLKQDIKALVVACNTATAMAIHLLREKYPDLPIVGVEPGLKPAAAKTITGTVGVMAT-- 129
Query: 131 TLRRTYTSN---LIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
RT SN ++H ++ Q +H + M + + + ++ + I + ++ +
Sbjct: 130 --ERTLASNKFHVLHQLLNDQTGVHFI--MQACNGMADLIEHAELDSEPIFELVQRYLLP 185
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSP----WPVDWLDNSDSIARRARCLL 234
++ D IVL CTHYP + HV +++ ++ +D ++AR+ + LL
Sbjct: 186 LLEQKADTIVLGCTHYPFVRHVIEKVAADYGSTQLNIIDTGYAVARQLKHLL 237
>gi|184159912|ref|YP_001848251.1| glutamate racemase [Acinetobacter baumannii ACICU]
gi|183211506|gb|ACC58904.1| Glutamate racemase [Acinetobacter baumannii ACICU]
gi|322509829|gb|ADX05283.1| Glutamate racemase [Acinetobacter baumannii 1656-2]
Length = 266
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 16/267 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T T+
Sbjct: 65 AQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +LI +Y + LV + LA ++E K E+K ++ ++
Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH----QTRVFDDH 248
D I+L CTHYP + +++ + ++ S+++ + L+ ++N + ++ +H
Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ---LIRQLNQYHLSSESPNEGNH 236
Query: 249 ALFLSGKP----DIAMRRLMQGFGLKS 271
++ S P D+ L + +K+
Sbjct: 237 IIWTSSDPLEVADVTFSLLSEKLSVKA 263
>gi|257456303|ref|ZP_05621500.1| glutamate racemase [Treponema vincentii ATCC 35580]
gi|257446389|gb|EEV21435.1| glutamate racemase [Treponema vincentii ATCC 35580]
Length = 255
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 6/249 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIGGL + P+ YVAD FPYG + + + + I+++ P
Sbjct: 1 MDSGIGGLPYFRYFHQKAPQAPAAYVADLEHFPYGEKTRDEVIRFAVGVTEKIINRLNPE 60
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
+ ++ CNT T D LR TF S+ F+G VPA+K AA + + I I++T T+ Y
Sbjct: 61 MIIVVCNTMSTAALDALRKTF-SIPFVGTVPAVKVAAEVSVNKRIGIIATARTINDPYLD 119
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
LI S+ + C I + L +++E I ++E +K + + + TD +VLA
Sbjct: 120 KLIESFAADCTIERRADAELVAKIENGL--ITAPDEEKRKAVMPAIRQFKAAGTDTLVLA 177
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258
CTH+ + F + + + +D+ + A +LP T + +++G+
Sbjct: 178 CTHFLHLADTFAECAAPEIKVVDSLPGVVSHALDVLPPPAGGNT---SRSSCYVTGEITE 234
Query: 259 AMRRLMQGF 267
+ RL +G+
Sbjct: 235 RIDRLYRGY 243
>gi|77460966|ref|YP_350473.1| glutamate racemase [Pseudomonas fluorescens Pf0-1]
gi|77384969|gb|ABA76482.1| putative glutamate racemase [Pseudomonas fluorescens Pf0-1]
Length = 263
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL +++ L+P +Y+ D PYG +++R +
Sbjct: 3 EAPIAVFDSGVGGLSVLAEIQQLLPNESLLYLGDCGHIPYGEKTPEFIRQRCSVMAGFFR 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L VIACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL
Sbjct: 63 EQGAKAL-VIACNTATVAGVADLRRDFPEWPIVGMEPAVKPAAAATRSGVVGVLATTGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ ++
Sbjct: 122 QSAKFAALLDRFATDVRVITQPCPGLVELIESG----DLHSPQLRALLKHYVDPLLANGC 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D I+L CTHYP + + + + P + +D ++AR+ + LL
Sbjct: 178 DTIILGCTHYPFLKPMLKSMIPESISLIDTGAAVARQLQRLL 219
>gi|11386951|sp|Q9RU10|MURI_DEIRA RecName: Full=Glutamate racemase
Length = 290
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 4/221 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL +++ +P+ +Y+AD PYG D ++ ++++ +
Sbjct: 20 IGVFDSGAGGLSVLAELQRALPQEDVLYLADTAHVPYGARSDEDIRDLTARAVAELVRRG 79
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA LR F + +G VPA+K A A T+SG++ +L+TP TLR T
Sbjct: 80 VKAV-VVACNTASAFSLTHLRERF-ELPIIGLVPAVKPAVAATKSGVVGVLATPGTLRGT 137
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+++I + + ++ ++ ++ + K E + + D +
Sbjct: 138 LLADVIRQWAEPAGVRVMQAV--STELVPLVEAGKADSPEARVVLRDVLEPLAEAGADQL 195
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
VL CTHYP + R +D+ ++AR R +L R
Sbjct: 196 VLGCTHYPFLAGSIRAEFGDTFALVDSGAAVARHTRNVLSR 236
>gi|30248466|ref|NP_840536.1| aspartate and glutamate racemase:glutamate racemase [Nitrosomonas
europaea ATCC 19718]
gi|30138352|emb|CAD84360.1| Aspartate and glutamate racemases:Glutamate racemase [Nitrosomonas
europaea ATCC 19718]
Length = 271
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 6/212 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL V + R L+P F+YVAD PYG+ E + +R+ + +++
Sbjct: 8 IFDSGVGGLAVYRAARKLLPHQAFVYVADSGFAPYGSRESAYIIRRVTEIADALVNNGAK 67
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA LR+ + S+ +G PAIK AAA +++G I +L+T T
Sbjct: 68 AL-VVACNTATVTTVTALRAKY-SLPIIGIEPAIKPAAAISRNGRIVVLTTRRTAESEAV 125
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L Y + I L LA +VE I +E+K+ + DV+VL
Sbjct: 126 AQLCVRYGTHVQIMLQPCPGLADQVEAG----NIDGEEVKEMLRQYLAPAVSLANDVVVL 181
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
CTH+ + + L+ V ++ S+++AR+
Sbjct: 182 GCTHFTFLADQIQNLAGPQVTIIEPSEAVARQ 213
>gi|213855738|ref|ZP_03383978.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 118
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 1 MLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRY 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 61 PLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKR 118
>gi|301597891|ref|ZP_07242899.1| glutamate racemase [Acinetobacter baumannii AB059]
Length = 197
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T T+
Sbjct: 65 TQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +LI +Y + LV + LA ++E K E+K +E ++
Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAYTAEVKDYLENILAPLVEQKV 179
Query: 193 DVIVLACTHYPLI 205
D I+L CTHYP +
Sbjct: 180 DTIILGCTHYPFV 192
>gi|319763448|ref|YP_004127385.1| glutamate racemase [Alicycliphilus denitrificans BC]
gi|330824305|ref|YP_004387608.1| glutamate racemase [Alicycliphilus denitrificans K601]
gi|317118009|gb|ADV00498.1| glutamate racemase [Alicycliphilus denitrificans BC]
gi|329309677|gb|AEB84092.1| glutamate racemase [Alicycliphilus denitrificans K601]
Length = 287
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 13/230 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ + A ++ + L
Sbjct: 10 IGVFDSGIGGLSVLQALRHELPHEDFVYLADSGNAPYGDAKGEAFVQQRTLAIARWLRAQ 69
Query: 76 QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + V+ACNTA + LR+T P + +G PA+K AAA +Q+ + +L+T T+
Sbjct: 70 HGIKALVVACNTATAAAVERLRATLPDLPAIGVEPALKPAAARSQTHHVGVLATRGTVSS 129
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------GCF 184
+ L + ++ + + LA +E+ + + E +I G F
Sbjct: 130 ARFARLHDEHGARTRFAVQACDGLARAIEQ-STEEPLPATESATKIRALCARYTGALGRF 188
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
K G D +VL CTHY R L V LD ++AR+ R +L
Sbjct: 189 GLKTGD-IDTLVLGCTHYVFAKDALRDLVGPDVQILDTGAAVARQTRRIL 237
>gi|229588286|ref|YP_002870405.1| glutamate racemase [Pseudomonas fluorescens SBW25]
gi|229360152|emb|CAY47009.1| putative peptidoglycan biosynthesis protein [Pseudomonas
fluorescens SBW25]
Length = 264
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 21/227 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL---KKRLMFLFSDIL 72
I +FDSG+GGL VL +++ L+P +YVAD PYG + +R+ F +
Sbjct: 7 IGVFDSGVGGLTVLDEIQQLLPHESLLYVADCGHIPYGEKSPAFILERSRRVAAFFREQG 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL
Sbjct: 67 AKA----FVIACNTATVAAVADLRLDFPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE-----GCFIEK 187
+ + L+ + + + L +E +++ IE GC
Sbjct: 123 QSAKFAALLDRFATDVKVVTQPCPGLVELIESGDLNSPALRQLLQRYIEPLLSAGC---- 178
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D I+L CTHYP + + Q+ P + +D ++AR+ + LL
Sbjct: 179 -----DTIILGCTHYPFLKPLLAQMLPPSIILIDTGAAVARQLKRLL 220
>gi|293610501|ref|ZP_06692801.1| predicted protein [Acinetobacter sp. SH024]
gi|292826845|gb|EFF85210.1| predicted protein [Acinetobacter sp. SH024]
Length = 266
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 5/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLI 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNT + + +R+ ++ + PA+K A A TQS I++L+T T+
Sbjct: 65 NDGNCKAIVVACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +LI +Y + LV + LA ++E K E+K ++ ++
Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D I+L CTHYP + +++ + ++ S+++ +
Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216
>gi|159900727|ref|YP_001546974.1| glutamate racemase [Herpetosiphon aurantiacus ATCC 23779]
gi|229486239|sp|A9AXC6|MURI_HERA2 RecName: Full=Glutamate racemase
gi|159893766|gb|ABX06846.1| glutamate racemase [Herpetosiphon aurantiacus ATCC 23779]
Length = 254
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 12/222 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLMFLFSDIL 72
I +FDSG+GGL L+ +R L+P IY AD PYG E AL +R+ + IL
Sbjct: 6 IGMFDSGVGGLSTLRDLRALLPHEDIIYYADTGNCPYGGRSHEEIVALSERITY----IL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA D LR F S++F+G P IK A A T++G++ +++T AT+
Sbjct: 62 LERGVKLIVVACNTATLHAVDYLREHF-SISFVGMEPGIKPAIAQTKTGVVGVMATQATV 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
LI Y + + L +E + D + + + K G
Sbjct: 121 AGERFQRLIARYAGDVQVVPQACPGLVELIEAGELQSETTRDAVARYVAPLL--KAG--A 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D IVL CTHYP + + ++ V LD ++AR+ + LL
Sbjct: 177 DTIVLGCTHYPFLRSLIADVAGPNVALLDTGAAVARQTQRLL 218
>gi|110637498|ref|YP_677705.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
gi|110280179|gb|ABG58365.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
Length = 266
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 6/223 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL +L K+ +P F Y D PYG +++ + + +
Sbjct: 1 MHQPIGIFDSGVGGLTLLDKLVHALPAESFEYYGDSGNCPYGTKTIEEIRQHTIRIMDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ K+ ++ ++ACNT T I D+LRS +P M +G P K A A + + I IL+T T
Sbjct: 61 MQKHCKMI-IVACNTITTNIIDQLRSIYP-MPIVGMEPGTKPAYASSANKRIGILATAGT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + S+ + S I A VE I I++ + +++E
Sbjct: 119 INGQLYNRTLESFNDKA---FFISQIGAGLVELIEQNI-IEQARMMQQLEPLLKPMIDAH 174
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHY + +V + P+P++ +D D++ R+ + +L
Sbjct: 175 IDTLVLGCTHYNYLTNVLAGMFPYPIEIIDTRDAVTRQVQRIL 217
>gi|167572233|ref|ZP_02365107.1| glutamate racemase [Burkholderia oklahomensis C6786]
Length = 290
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 6/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + + +
Sbjct: 18 IGIFDSGLGGLSVLRAVRARLPDEALVYVADSRHAPYGPRDDAFIVERTLAIGEWLAAQG 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR
Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRSA 135
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI + C + L VE G E++ + G D +
Sbjct: 136 RFEALIARHADDCRFICQAGHGLVEAVERGDTG----SPELRALLTGYLEPMLAAGADTL 191
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VL CTHYP + R ++ + +D SD+IAR+
Sbjct: 192 VLGCTHYPFLDAAIRDVASDRLHLIDTSDAIARQ 225
>gi|241763139|ref|ZP_04761199.1| glutamate racemase [Acidovorax delafieldii 2AN]
gi|241367764|gb|EER62018.1| glutamate racemase [Acidovorax delafieldii 2AN]
Length = 284
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 101/233 (43%), Gaps = 10/233 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ +SI +FDSG+GGL VL+ + +P F+Y+AD PYG D + +R +
Sbjct: 3 QASSSIGVFDSGVGGLSVLRALIAALPHERFVYLADSGNAPYGERGDAFVARRTHAITDY 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ +Y V+ACNTA E+RS P + +G PA+K A T +G I +L T
Sbjct: 63 LQSQYDIKALVVACNTATAAAIHEVRSAHPELPLVGVEPALKPAVGLTHTGRIGVLGTRG 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIE------ 181
TL L S Q + LA +E + G E E
Sbjct: 123 TLTSAKFGRLQASLAGQAEFVVQPCDGLAHAIERSVGWPSGPNAPGTETFALCEKYLASM 182
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
F G D +VL CTHY + R L V ++ + +AR+ R LL
Sbjct: 183 KPFGSAPGS-IDTLVLGCTHYVFVEEALRSLVGPQVQMIETGEPVARQTRRLL 234
>gi|148546010|ref|YP_001266112.1| glutamate racemase [Pseudomonas putida F1]
gi|166231050|sp|A5VYG8|MURI_PSEP1 RecName: Full=Glutamate racemase
gi|148510068|gb|ABQ76928.1| glutamate racemase [Pseudomonas putida F1]
Length = 265
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 5/217 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL VL +++ L+P +YVAD PYG +++R + ++ +
Sbjct: 10 VMDSGVGGLSVLAEIQRLLPNETLLYVADCGHIPYGEKSPDYIRERCRHI-AEFFHEQGA 68
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL+
Sbjct: 69 KAMVLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSAKF 128
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + + + L +E + +++ ++G D ++L
Sbjct: 129 AALLDRFANDVQVITQPCPGLVELIETG----DLASPALRQMLQGYVQPLLAAGCDTLIL 184
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
CTHYP + + + P V +D ++AR+ R LL
Sbjct: 185 GCTHYPFLRPLLAGMVPNDVAIIDTGAAVARQLRRLL 221
>gi|94986184|ref|YP_605548.1| glutamate racemase [Deinococcus geothermalis DSM 11300]
gi|94556465|gb|ABF46379.1| Glutamate racemase [Deinococcus geothermalis DSM 11300]
Length = 271
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 20/256 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL ++R +P F+Y+AD P G D ++ D+ ++
Sbjct: 9 VFDSGVGGLSVLAQLRRHLPHEDFLYLADTAHVPIGARPDDEIR--------DLTERAVA 60
Query: 78 VLS-------VIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L V+ACNTA LR + PS +G VPA+K A A T+SG++ +L+TP
Sbjct: 61 ALHARGAKGVVVACNTASAFSLTPLRERYGPSFPIIGLVPAVKPAVAATRSGVVGVLATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TLR T ++I + + ++++ + A V G + + + +
Sbjct: 121 GTLRGTLLRDVIRKWADPAGVRVLTA-VSAELVPLVEAG-QASSERARAVLRETLTPLAQ 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTHYP + R+ +D+ ++AR +L + HA
Sbjct: 179 AGADQLVLGCTHYPFLAESIRREFGDTFALVDSGAAVARHTGNVLAGAGLLREAGRPGHA 238
Query: 250 LFL-SGKPDIAMRRLM 264
+L +G P+ A R +M
Sbjct: 239 TYLVTGNPE-ASRPVM 253
>gi|167838899|ref|ZP_02465676.1| glutamate racemase [Burkholderia thailandensis MSMB43]
Length = 290
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 6/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL VL+ +R +P +YVAD + PYG +D + +R + + ++
Sbjct: 15 RTPIGIFDSGLGGLSVLRAVREQLPGEAIVYVADSLHAPYGPRDDAFIIERTLAIGEWLV 74
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 75 AQGAKAL-VVACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R LI Y + C + L +E G E++ + G
Sbjct: 133 RSARFEALIARYAADCRFIRQAGHGLVEAIERGDTG----SPELRALLAGYLEPMLEAGA 188
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D +VL CTHYP + R ++ + +D D+IAR+
Sbjct: 189 DTLVLGCTHYPFLDAAIRDVTSNCLHLIDTGDAIARQ 225
>gi|15806594|ref|NP_295309.1| glutamate racemase [Deinococcus radiodurans R1]
gi|6459350|gb|AAF11147.1|AE002002_5 glutamate racemase [Deinococcus radiodurans R1]
Length = 369
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 8/223 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL +++ +P+ +Y+AD PYG D ++ ++++ +
Sbjct: 99 IGVFDSGAGGLSVLAELQRALPQEDVLYLADTAHVPYGARSDEDIRDLTARAVAELVRRG 158
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA LR F + +G VPA+K A A T+SG++ +L+TP TLR T
Sbjct: 159 VKAV-VVACNTASAFSLTHLRERF-ELPIIGLVPAVKPAVAATKSGVVGVLATPGTLRGT 216
Query: 136 YTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+++I + + ++ S L VE K E + + D
Sbjct: 217 LLADVIRQWAEPAGVRVMQAVSTELVPLVEAG----KADSPEARVVLRDVLEPLAEAGAD 272
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+VL CTHYP + R +D+ ++AR R +L R
Sbjct: 273 QLVLGCTHYPFLAGSIRAEFGDTFALVDSGAAVARHTRNVLSR 315
>gi|256827100|ref|YP_003151059.1| glutamate racemase [Cryptobacterium curtum DSM 15641]
gi|256583243|gb|ACU94377.1| glutamate racemase [Cryptobacterium curtum DSM 15641]
Length = 264
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 10/229 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GG+ VL+ + +P +F+Y D PYG+ ++ + +L +
Sbjct: 12 VFDSGVGGISVLRNLVRELPAENFLYYGDSAHAPYGDKTIVEVRSLSANIVETMLARGVK 71
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA + + LR +P + +G PA+K AA Q I +++T TL+
Sbjct: 72 AI-VIACNTATSAAAEHLRECYPGLPIIGMEPALKPAAINPQHQNILVMATTVTLKLDKF 130
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L H++ SQ HI + LA VE + D I+ + G+ D +VL
Sbjct: 131 QQLAHTWGSQSHIIALPCPGLADLVETG----DLDSDAIRSYLAEKLAPYRGQ-VDSVVL 185
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR----INTHQT 242
CTHYP + Q+ V D AR+ R LL +NT QT
Sbjct: 186 GCTHYPFLKRQIHQVLGAEVPLFDGGAGCARQTRRLLSETHLLVNTPQT 234
>gi|260557842|ref|ZP_05830055.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
gi|260408633|gb|EEX01938.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
Length = 266
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 16/267 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T T+
Sbjct: 65 AQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +LI Y + LV + LA ++E K E+K ++ ++
Sbjct: 124 KGKNLKSLIEMYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH----QTRVFDDH 248
D I+L CTHYP + +++ + ++ S+++ + L+ ++N + ++ +H
Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ---LIRQLNQYHLSSESPNEGNH 236
Query: 249 ALFLSGKP----DIAMRRLMQGFGLKS 271
++ S P D+ L + +K+
Sbjct: 237 IIWTSSDPLEVADVTFSLLSEKLSVKA 263
>gi|167461654|ref|ZP_02326743.1| glutamate racemase [Paenibacillus larvae subsp. larvae BRL-230010]
gi|322384236|ref|ZP_08057946.1| glutamate racemase-like protein [Paenibacillus larvae subsp. larvae
B-3650]
gi|321151128|gb|EFX44445.1| glutamate racemase-like protein [Paenibacillus larvae subsp. larvae
B-3650]
Length = 268
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 16/251 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-- 69
+Q +I I DSG+GGL V++++ +P+ IY D PYG +K LF+
Sbjct: 1 MQQAIAILDSGVGGLTVVKEVMRQLPQEQIIYFGDSARSPYGPRPADEVK-----LFTRQ 55
Query: 70 --DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
D L ++ P + VIACNTA + +E+R ++ +G + P + A ++G I ++
Sbjct: 56 VVDYLIEFHPKMIVIACNTATAVALEEIRQRV-AIPVVGVISPGARAAIKMARTGSIGVI 114
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+R + + +H S +LA VE+ GI +E + +E +
Sbjct: 115 GTDGTIRSGAYEETLKTISPTIQVHSQSCPLLAPMVEK---GI-FNGEEALQVVESSLLP 170
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF- 245
K D ++L CTHYP + V ++ V +++++ AR +L N T F
Sbjct: 171 LLDKSMDCLILGCTHYPYLADVIGKVMGPEVCLINSAEETAREVSTILQHQNQLATGKFR 230
Query: 246 DDHALFLSGKP 256
+H F SG P
Sbjct: 231 PEHRFFCSGDP 241
>gi|163786500|ref|ZP_02180948.1| glutamate racemase [Flavobacteriales bacterium ALC-1]
gi|159878360|gb|EDP72416.1| glutamate racemase [Flavobacteriales bacterium ALC-1]
Length = 261
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 119/226 (52%), Gaps = 20/226 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG + +++ L+P + IY+AD PYGN + + +L +++L
Sbjct: 8 IGIFDSGIGGTSIFKEIIALLPNENCIYLADSKNAPYGNKSEADIL-QLSIKNTELLISK 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA T LR+ + ++F+G PAIK AA TQS I IL+T TL
Sbjct: 67 GCKLIVVACNTATTNAISYLRANY-DVSFIGIEPAIKPAALNTQSKSIGILATKGTL--- 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-------IKEDEIKKEIEGCFIEKE 188
+S+L H L + I +E+ GI ++ DE+KK +E
Sbjct: 123 -SSHLFHKTTD-----LYTDGI--KVIEQVGEGIVPLIETGLLESDEMKKLLETYLEPML 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ D +VL CTHYP ++ + +++ P V +D+ ++A++ + +L
Sbjct: 175 KQNIDYLVLGCTHYPYLIPMLKKMLPEHVKIIDSGLAVAKQTQAVL 220
>gi|167036404|ref|YP_001671635.1| glutamate racemase [Pseudomonas putida GB-1]
gi|166862892|gb|ABZ01300.1| Glutamate racemase [Pseudomonas putida GB-1]
Length = 296
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I++ DSG+GGL + +++ L+PE +YV D+ FPYG+ + +R+ L + +
Sbjct: 34 IVVLDSGVGGLTLSRQLELLLPEASILYVVDNEWFPYGSKSGAEISQRVQHLIDQLYTQI 93
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P+ V+ACNTA +KD + FL P +++A + I +L+TP T++
Sbjct: 94 RPLAIVVACNTASVAMKDYGLDSCVQHCFL-ITPPLEEAVEISDQKNIVLLATPGTVKSR 152
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y + ++ +I +++ L + E G K ++ K+ D +
Sbjct: 153 YIRRAMAITRNRANIWPIAAQPLVALSEARLAGQVASFASFTKLVDDHLTTKQRFSIDTV 212
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+L CTH+P ++ + P +WLD + +A R
Sbjct: 213 ILGCTHFPHVIKDLEGIFPSVQNWLDPAKKVALR 246
>gi|288940398|ref|YP_003442638.1| glutamate racemase [Allochromatium vinosum DSM 180]
gi|288895770|gb|ADC61606.1| glutamate racemase [Allochromatium vinosum DSM 180]
Length = 282
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 6/252 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++R L+P +YVAD PYG+ ++ R + + +L
Sbjct: 4 HHPIGVFDSGLGGLTVLREIRRLLPGEDLLYVADSAHAPYGDKSMAFIESRSIAITEFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + V+ACNTA LR+ + ++ + PA+K A T+SG++++L+T TL
Sbjct: 64 ERGAKAI-VVACNTATGAAAKLLRTQY-NVPLIAMEPAVKPAVERTRSGVVAVLATRRTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
S L+ + I L L RVE + + ++ +E +
Sbjct: 122 ASHNFSVLLGRLETDAEILLQPCPGLVERVEAGDLAGEGTRELLRGYLEPLL----ARGA 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYPL+ + ++L+ V LD+ +AR+ R L F
Sbjct: 178 DTLVLGCTHYPLLTPLIQELAGPDVLILDSGIGVARQVRRRLSEAELLAPEERTGRERFW 237
Query: 253 SGKPDIAMRRLM 264
+ P M LM
Sbjct: 238 TSAPPARMHALM 249
>gi|53804366|ref|YP_113738.1| glutamate racemase [Methylococcus capsulatus str. Bath]
gi|81682254|sp|Q609F9|MURI_METCA RecName: Full=Glutamate racemase
gi|53758127|gb|AAU92418.1| glutamate racemase [Methylococcus capsulatus str. Bath]
Length = 271
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 7/252 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I +FDSG+GGL VL+++R ++P + +YVAD PYGN +++R + + +L
Sbjct: 5 EHPIGVFDSGVGGLSVLREIRAVLPHENLLYVADSGHLPYGNKPAEYIEQRALTVGRFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA +R+ F + +G P +K A A ++S ++ +L+T TL
Sbjct: 65 SRGAKAI-VVACNTATAAAITVMRAEF-RVPVIGMEPGLKPAVALSKSLVVGVLATEGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +L+ + + + +VE G D +++ E +
Sbjct: 123 KSAKFRDLVGRTTEKVEVIAQACPGWVEQVERGDLGSPATRDLVRRYTEPALE----RGA 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP + + ++ V ++ ++AR R L R+ LF
Sbjct: 179 DTLVLGCTHYPFLAGLIADVAGPDVHIVETGSAVARHLRRRLEADGLLTRRMAPGVELFW 238
Query: 253 SGKP-DIAMRRL 263
S P ++A R L
Sbjct: 239 SSGPAEVAGRSL 250
>gi|332873348|ref|ZP_08441302.1| glutamate racemase [Acinetobacter baumannii 6014059]
gi|323519838|gb|ADX94219.1| glutamate racemase [Acinetobacter baumannii TCDC-AB0715]
gi|332738411|gb|EGJ69284.1| glutamate racemase [Acinetobacter baumannii 6014059]
Length = 266
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 16/264 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++ +
Sbjct: 8 IGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLISNLVAQG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNT + + +R+ ++ + PA+K A A TQS I++L+T T++
Sbjct: 68 KCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATATTVKGK 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+LI +Y + LV + LA ++E K E+K ++ ++ D I
Sbjct: 127 NLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKVDTI 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN----THQTRVFDDHALF 251
+L CTHYP + +++ + ++ S+++ + L+ ++N + ++ +H ++
Sbjct: 183 ILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ---LIRQLNQYHLSSESPNEGNHIIW 239
Query: 252 LSGKP----DIAMRRLMQGFGLKS 271
S P D+ L + +K+
Sbjct: 240 TSSDPLEVADVTFSLLSEKLSVKA 263
>gi|330811716|ref|YP_004356178.1| glutamate racemase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379824|gb|AEA71174.1| Glutamate racemase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 263
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL VL ++R L+P +YVAD PYG +++R + +L
Sbjct: 3 EAPIGVLDSGVGGLSVLGEIRQLLPNESLLYVADCGHIPYGEKTPEYIRQRCSIIADFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL
Sbjct: 63 GQGAKAL-VVACNTATVAAVADLRRDFPHWPIVGMEPAVKPAAAATRSGIVGVLATTGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + + + ++
Sbjct: 122 QSAKFAALLDRFATDVRVITQPCPGLVELIETG----DLHSPALYQLLQHYVDPLLAAGC 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYP + + ++ P + +D ++AR+ + LL
Sbjct: 178 DTLILGCTHYPFLKPLLARMIPEHISLIDTGAAVARQLQRLL 219
>gi|171463476|ref|YP_001797589.1| glutamate racemase [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171193014|gb|ACB43975.1| glutamate racemase [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 268
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 6/242 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL +L + +P++ +IY+AD PYG + R + L + + K
Sbjct: 4 IGVFDSGVGGLSILDEALRQLPQHDYIYLADSANAPYGEKSSDWIATRSLGLCNYLASKE 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++R+ ++ +G P IK AA +Q+ ++ +L+T ATL+
Sbjct: 64 CDAI-VVACNTATAEAIKQIRAQL-AIPIIGVEPGIKPAAMQSQNHIVGVLATEATLKSD 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + S C + L +E + + + K +E I+ G D I
Sbjct: 122 KFNALLATLPSDCQFIKQAGAGLVPLIESGNADGEDTLELLAKHLEP--IQDAG--ADTI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + R+L + +D SD++ R+ + L + L LS K
Sbjct: 178 VLGCTHYPFLKKAIRKLLGESITLIDTSDAVVRQLKQQLESLKKESGNKEFGSVLLLSSK 237
Query: 256 PD 257
+
Sbjct: 238 DE 239
>gi|254251913|ref|ZP_04945231.1| Glutamate racemase [Burkholderia dolosa AUO158]
gi|124894522|gb|EAY68402.1| Glutamate racemase [Burkholderia dolosa AUO158]
Length = 285
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P FIYVAD PYG +D + +R + + ++ +
Sbjct: 16 IGIFDSGLGGLSVLRAVRAHLPGESFIYVADARYVPYGERDDAFITERTIAIGEWLVGQR 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA R ++ +G P IK A + SG+ +L+T +TLR
Sbjct: 76 AKAL-VIACNTATAQSIAAARERL-AIPVVGVEPGIKPAVQQSASGVAGVLATQSTLRSA 133
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ + + C L +E G + + E D +
Sbjct: 134 RFQALLERHGAGCRFICQPGHGLVQAIERGDTGSPALRALLADYLHRMLDEG----ADTV 189
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
VL CTHYP ++ R + + +D SD+IAR+ L+ ++ H R DD
Sbjct: 190 VLGCTHYPFLIATIRDIVGDRLSIVDTSDAIARQ---LVRVLDQHDLRAPDD 238
>gi|313497102|gb|ADR58468.1| Glutamate racemase [Pseudomonas putida BIRD-1]
Length = 265
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 5/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL VL +++ L+P +YV D PYG +++R + ++
Sbjct: 8 IGVMDSGVGGLSVLAEIQRLLPNETLLYVGDCGHIPYGEKSPDYIRERCRHIAGFFHEQG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL+
Sbjct: 68 AKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSA 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + + + L +E + +++ ++G D +
Sbjct: 127 KFAALLDRFANDVQVITQPCPGLVELIETG----DLASPALRQMLQGYVQPLLAAGCDTL 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+L CTHYP + + + P V +D ++AR+ R LL
Sbjct: 183 ILGCTHYPFLRPLLAGMVPDDVAIIDTGAAVARQLRRLL 221
>gi|262374074|ref|ZP_06067351.1| glutamate racemase [Acinetobacter junii SH205]
gi|262311085|gb|EEY92172.1| glutamate racemase [Acinetobacter junii SH205]
Length = 290
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 128/267 (47%), Gaps = 33/267 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL + Q++ +P +Y AD PYG D +++ L + L +
Sbjct: 23 IGVFDSGIGGLSIAQEIASHLPNERILYYADTAHVPYGARSDQEIRE-LTAKAIEWLYRQ 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++V+ACNTA D LR + +G VPA+K A TQS ++++L+TPAT R
Sbjct: 82 GCKIAVVACNTASAFSLDYLREHYGEHFPIVGLVPALKPAVLQTQSKVVAVLATPATFRG 141
Query: 135 TYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG--- 189
++ + + + V+S+ L VE G ++ E C +E
Sbjct: 142 KLIKEVMLKFAEPAGVKVLTVTSLKLVPFVE---AGEQMS--------EACLVELHNILQ 190
Query: 190 ----KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-------RCLLPRIN 238
+ D +VL CTHYP + RQ+ + +D+ ++AR+ R L +I+
Sbjct: 191 PVVDQGADFLVLGCTHYPFLKDAIRQIFNEKLKLIDSGQAVARQTAYILIKNRLLCDKIS 250
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQ 265
+ TR+ F+SG+ + ++ ++Q
Sbjct: 251 HNITRI----ECFVSGQNAVELQPVVQ 273
>gi|160892852|ref|ZP_02073641.1| hypothetical protein CLOL250_00382 [Clostridium sp. L2-50]
gi|156865411|gb|EDO58842.1| hypothetical protein CLOL250_00382 [Clostridium sp. L2-50]
Length = 259
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 5/197 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG+ VL+++ LMPE ++IY D PYG + ++ L + L ++
Sbjct: 8 IGIFDSGIGGISVLKEIVALMPEENYIYYGDSAHAPYGTRQVADIQN-LSRSCVEFLLEH 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA + LR+ +P + +G PA+K A + + I++++TP TL++
Sbjct: 67 DAKAIVIACNTATSAAAAMLRADYPDIPVIGIEPALKPAVLWKEHDRIAVMATPMTLKQD 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L+H+Y + I+ V L VE D + +E+ ++E K D I
Sbjct: 127 KFLSLMHTYEDRSVIYRVPCPKLVGFVENGDLDSPKLHDYL-QEVLSPYLE---KGIDAI 182
Query: 196 VLACTHYPLIVHVFRQL 212
VL CTHYP + + R +
Sbjct: 183 VLGCTHYPFVEKMIRTV 199
>gi|303233055|ref|ZP_07319730.1| glutamate racemase [Atopobium vaginae PB189-T1-4]
gi|302480830|gb|EFL43915.1| glutamate racemase [Atopobium vaginae PB189-T1-4]
Length = 261
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+++ LMP +F+Y+ D PYG+ + R + +++L
Sbjct: 8 IGVFDSGVGGISVLKRLVELMPHENFVYMGDSAYNPYGSKTKQQIIDRSCTIVNELLAHS 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA + D LR FP + +G PA+K A + ++ + +L+TPATL
Sbjct: 68 IKAL-VIACNTATSAASDYLRVQFPELPIIGIEPALKAALDHPKTMPVLVLATPATLTLE 126
Query: 136 YTSNLIHSYVSQ---CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L H Q ++ + LA R+E+ + D++ +++ E G
Sbjct: 127 KYQELEHKLGVQRNTSQVYRLGCKGLAHRIEQG----NLNADDLMQDLHTLLDEYRGV-V 181
Query: 193 DVIVLACTHYPLI-VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
+ +VL CTHYP + H+ L P D + AR +L F
Sbjct: 182 NSVVLGCTHYPFVKQHICDILGDVP--CYDGAIGTARHCLSVLSARGLLNPSEDAGTIEF 239
Query: 252 LSGKPDIAMRRLMQGF 267
LS P A Q F
Sbjct: 240 LSSTPGAAQIAFYQSF 255
>gi|326795261|ref|YP_004313081.1| glutamate racemase [Marinomonas mediterranea MMB-1]
gi|326546025|gb|ADZ91245.1| Glutamate racemase [Marinomonas mediterranea MMB-1]
Length = 276
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 109/219 (49%), Gaps = 6/219 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ ++ I DSG GGL VL +R PE + Y AD PYG LK RL+ + +
Sbjct: 1 MKYNVAIIDSGSGGLSVLNTIRRQSPELNLHYYADSCFSPYGEKSSEFLKSRLVQIGRYL 60
Query: 72 LDKYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+PV + V+ACNTA D LR S+ +G PA+K A +S+L+TP
Sbjct: 61 EALSEPVHAIVLACNTATVEGIDALRRAV-SIPVVGVEPAVKPALVNPNVSRVSVLATPV 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ LI + + + L+SS LA ++ E + KEIE E
Sbjct: 120 TIGSNRLQALISLWKNDKQVQLISSADLARLIDS---ADSRSESALCKEIERICSEVTVF 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
R DV+VLACTHYPL+ F + S V+ L+ S S++ +
Sbjct: 177 RPDVLVLACTHYPLVRDRF-EGSLHGVEILEPSSSVSNQ 214
>gi|167588983|ref|ZP_02381371.1| glutamate racemase [Burkholderia ubonensis Bu]
Length = 285
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + + L +
Sbjct: 17 VGVFDSGLGGLSVLRAVRAQLPGESFVYVADSRNAPYGPRDEAFITERTLAI-GEWLARE 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA +R ++ +G P IK AAA + SG+ +L+T +TL
Sbjct: 76 GAKALVVACNTATAQSIAAIRERL-AIPLVGVEPGIKPAAALSASGIAGVLATQSTLASA 134
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ Y + C L VE ++ ++G D +
Sbjct: 135 RFQALLDRYGAGCRFICQPGHGLVEAVERG----DTNSPALRALLDGYLQPMLDAGADTL 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
VL CTHYP R L + +D SD+IAR+ AR L
Sbjct: 191 VLGCTHYPFFTETIRDLFGDRLTIVDTSDAIARQLARVL 229
>gi|167031792|ref|YP_001667023.1| glutamate racemase [Pseudomonas putida GB-1]
gi|189030364|sp|B0KNE7|MURI_PSEPG RecName: Full=Glutamate racemase
gi|166858280|gb|ABY96687.1| glutamate racemase [Pseudomonas putida GB-1]
Length = 265
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 6/247 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL VL +++ L+P +YVAD PYG +++R + ++
Sbjct: 10 VMDSGVGGLSVLAEIQRLLPNETLLYVADCGHVPYGEKSPDYIRQRCRHIAGFFHEQGAK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL+
Sbjct: 70 AM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSAKF 128
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + + + L +E + +++ + G D ++L
Sbjct: 129 AALLDRFANDVQVITQPCPGLVELIETG----DLTSPVLRQMLWGYVQPLLAAGCDTLIL 184
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYP + + + P V +D ++AR+ + LL + D + S P+
Sbjct: 185 GCTHYPFLRPLLAGMVPADVAVIDTGAAVARQLQRLLGANDLLAEGPAGDARFWTSADPE 244
Query: 258 IAMRRLM 264
I +R+++
Sbjct: 245 I-LRKIL 250
>gi|86130768|ref|ZP_01049367.1| Asp/Glu/hydantoin racemase [Dokdonia donghaensis MED134]
gi|85818179|gb|EAQ39339.1| Asp/Glu/hydantoin racemase [Dokdonia donghaensis MED134]
Length = 268
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 20/260 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-------KKRLM 65
+N I +FDSGIGG + +++ +P IY+AD PYG + ++L+
Sbjct: 4 KNVIGVFDSGIGGTSIWKEIVTRLPGEDTIYIADSKNAPYGAKSKEDIIALSVKNTEKLI 63
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
L + I+ VIACNTA T + LR + + F+G PAIK AA +QS I I
Sbjct: 64 ALGAKII--------VIACNTATTNAINYLRENY-KIPFIGIEPAIKPAAVQSQSKAIGI 114
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T TL + + + V L +E+ ++ E+ +E
Sbjct: 115 LATKGTLNSSLFQTTSERWTQGVDVIEVIGEGLVPLIEQG----DLENIELYNLLESYIQ 170
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
K D +VL C+HYP ++ + +++ P V +D+ ++AR+ +L +N V
Sbjct: 171 PMVEKNIDYLVLGCSHYPYLIPLLKKMLPPHVAIIDSGLAVARQTEAVLKELNNLSGDVS 230
Query: 246 DDHALFLSGKPDIAMRRLMQ 265
+H L+ +G + + L++
Sbjct: 231 SEHYLYTNGDVKVLKKVLLR 250
>gi|318041257|ref|ZP_07973213.1| glutamate racemase [Synechococcus sp. CB0101]
Length = 272
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 112/248 (45%), Gaps = 16/248 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++ +P+ IY+AD PYG ++ + ++
Sbjct: 6 IGIFDSGLGGLSVWRQVVHHLPDESVIYLADQAHVPYGQRSAQEIQAYCSEIAGQLIAMG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA + + LR FP + LG PA+K A T SG++ +++TPAT +
Sbjct: 66 CKAI-VVACNTASAVALEPLRQAFPQLPILGLEPAVKPAVELTNSGVVGVMATPATFQGE 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE-GKRTDV 194
+ + + + LA VE I E E + F+ D
Sbjct: 125 LYRATVGRWAGDVQVVEQVCIGLADLVE-----IGELEGERCDALLRSFLNPMLEAGADT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA----- 249
IVL CTHYP ++ R+L + LD + ++AR L + T Q + A
Sbjct: 180 IVLGCTHYPFVIEAIRRLVGPGLAVLDPAPAVARH----LGEVLTAQGLLNGSSAGRELR 235
Query: 250 LFLSGKPD 257
F S +PD
Sbjct: 236 FFTSAQPD 243
>gi|91782687|ref|YP_557893.1| glutamate racemase [Burkholderia xenovorans LB400]
gi|91686641|gb|ABE29841.1| glutamate racemase [Burkholderia xenovorans LB400]
Length = 295
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 17/233 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++ +
Sbjct: 25 IFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLVRQGAK 84
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA +R P + +G P IK AA +++ + +L+T TLR
Sbjct: 85 AL-VVACNTATAQSIAMVREKLP-IPLVGVEPGIKPAALQSKTRVAGVLATQVTLRSARF 142
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ Y + C L VE G E++ + G D +VL
Sbjct: 143 QALLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRGYLQPMLDAGADTLVL 198
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
CTHYP + R++ + +D S +IAR+ RV D H L
Sbjct: 199 GCTHYPFLDTAIREIVGDRLALIDTSVAIARQLE-----------RVLDQHGL 240
>gi|294649135|ref|ZP_06726577.1| glutamate racemase [Acinetobacter haemolyticus ATCC 19194]
gi|292825018|gb|EFF83779.1| glutamate racemase [Acinetobacter haemolyticus ATCC 19194]
Length = 295
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 12/224 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL + Q++ +P +Y AD PYG D ++ L + L +
Sbjct: 23 IGIFDSGIGGLSIAQEIALHLPNERILYYADTAHVPYGARSDQEIRN-LTAQAIEWLYRQ 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++V+ACNTA D LR + +G VPA+K A TQ+ ++++L+TPAT R
Sbjct: 82 GCKVAVVACNTASAFSLDYLRDHYGERFPIIGLVPALKPAVIQTQTKVVAVLATPATFRG 141
Query: 135 TYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEKEGK 190
+++ ++ + + V+++ L VE G ++ E + K+I IE+
Sbjct: 142 RLIKDVMLNFAEPAGVKVLTVTNLALVPFVE---AGEQMSEACKAVLKQILQPVIEQGA- 197
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYP + RQ+ + +D+ ++AR+ +L
Sbjct: 198 --DFLVLGCTHYPFLKPAIRQVFDEKLKLIDSGQAVARQTAYIL 239
>gi|226951878|ref|ZP_03822342.1| glutamate racemase [Acinetobacter sp. ATCC 27244]
gi|226837418|gb|EEH69801.1| glutamate racemase [Acinetobacter sp. ATCC 27244]
Length = 295
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 12/224 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL + Q++ +P +Y AD PYG D ++ L + L +
Sbjct: 23 IGIFDSGIGGLSIAQEIALHLPNERILYYADTAHVPYGARSDQEIRN-LTAQAIEWLYRQ 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++V+ACNTA D LR + +G VPA+K A TQ+ ++++L+TPAT R
Sbjct: 82 GCKVAVVACNTASAFSLDYLRDHYGERFPIIGLVPALKPAVIQTQTKVVAVLATPATFRG 141
Query: 135 TYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEKEGK 190
+++ ++ + + V+++ L VE G ++ E + K+I IE+
Sbjct: 142 RLIKDVMLNFAEPAGVKVLTVTNLALVPFVE---AGEQMSEACKAVLKQILQPVIEQGA- 197
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYP + RQ+ + +D+ ++AR+ +L
Sbjct: 198 --DFLVLGCTHYPFLKPAIRQVFDEKLKLIDSGQAVARQTAYIL 239
>gi|149927946|ref|ZP_01916196.1| glutamate racemase [Limnobacter sp. MED105]
gi|149823385|gb|EDM82618.1| glutamate racemase [Limnobacter sp. MED105]
Length = 278
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 10/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL+ M +P F +VAD+ PYG+ H + R++ L S+ L
Sbjct: 12 AVGVFDSGVGGLSVLKAMLNYLPAERFRFVADERYLPYGDKPQHEITDRVLTL-SNWLRN 70
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA ++ R+ + +G PA+K A+ T++G++ IL+T T+
Sbjct: 71 QECKAMVMACNTATAAGANQARAAHANWPIVGIEPAVKPASMLTKTGVVGILATTNTVAS 130
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + + L +E+ + E I+ ++ E K DV
Sbjct: 131 ERFKGLVERFDPLAKVIAHPCPGLVELIEQS----PMPEPAIEALLKPVLAELLQKNADV 186
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-----RINTHQTRVFDDHA 249
IVL CTHYP + H+ +L+ V ++ +A++ + L + + + +
Sbjct: 187 IVLGCTHYPFVAHLISKLAGPDVTVIETGLPVAKQLKTRLESEGLLNMGEAHLPMIERVS 246
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G+P+ +L+ G
Sbjct: 247 FFTTGQPEAFKTKLVNLLG 265
>gi|209521399|ref|ZP_03270111.1| glutamate racemase [Burkholderia sp. H160]
gi|209498175|gb|EDZ98318.1| glutamate racemase [Burkholderia sp. H160]
Length = 295
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I IFDSG+GGL VL+ +R +P +YVAD + PYG +D + R + + +
Sbjct: 20 QAPIGIFDSGLGGLSVLRAVRAQLPAEALLYVADSLYAPYGERDDDFITDRTLAIGEWLA 79
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VL V+ACNTA +R P + +G P +K AA ++S + +L+T ATL
Sbjct: 80 AQGAKVL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKSRVAGVLATQATL 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE G E++ +
Sbjct: 138 RSARFQGLLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRSYLEPMLDAGA 193
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D +VL CTHYP + R + + +D S +IAR+
Sbjct: 194 DTLVLGCTHYPFLDAAIRDIVGERLTLIDTSVAIARQ 230
>gi|296274260|ref|YP_003656891.1| glutamate racemase [Arcobacter nitrofigilis DSM 7299]
gi|296098434|gb|ADG94384.1| glutamate racemase [Arcobacter nitrofigilis DSM 7299]
Length = 266
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSGIGGL V++ + ++ Y+AD PYG + K + + ++ +
Sbjct: 5 VFDSGIGGLTVVKAITEVLKGAEIFYIADTKFAPYGEKSKEQILKHSFNIANYLVKTHNI 64
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA + ELR FP++ +G P IK A + +++G I IL+TPATL+
Sbjct: 65 DALVVACNTATSAAIKELREEFPNLIVVGTEPGIKPAISLSKNGKIGILATPATLKGEKY 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ + + V++ G I+ ++ + ++ K D IVL
Sbjct: 125 QLLVDKLSNASSNITLYEQACPGLVQQIENG-DIEGEKTFEMLKNWLKPMSEKGVDTIVL 183
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYPL+ +V +++ + ++ +IA R + L V + F S +
Sbjct: 184 GCTHYPLVGNVIKKIMGENTNLIETGYAIANRLKDLSKNCGHFNDGVLKVNVYFTSDINE 243
Query: 258 IAMRRLMQGF 267
+ +++ +
Sbjct: 244 TMISKILNSW 253
>gi|15639397|ref|NP_218846.1| glutamate racemase (murI) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025639|ref|YP_001933411.1| glutamate racemase [Treponema pallidum subsp. pallidum SS14]
gi|11386905|sp|O83421|MURI_TREPA RecName: Full=Glutamate racemase
gi|229486284|sp|B2S303|MURI_TREPS RecName: Full=Glutamate racemase
gi|3322687|gb|AAC65392.1| glutamate racemase (murI) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189018214|gb|ACD70832.1| glutamate racemase [Treponema pallidum subsp. pallidum SS14]
Length = 268
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 127/267 (47%), Gaps = 13/267 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+++ Q DSGIGGL +R +PE +YVAD V FPYGN + R +
Sbjct: 3 DRREQFQYAFLDSGIGGLPYAHALRVRVPEASLVYVADRVYFPYGNKSSAQIIARASAVL 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + P + V+ACN+ + LR+ VPAIKQA A + I +L+T
Sbjct: 63 QKVQTNFSPHIVVLACNSMSVNALEFLRAQVSVPVVG-VVPAIKQAVACSHKKHIGVLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-IEGCFIEK 187
T+ YT+ L + + C + + L +E G+ + +++++E + +
Sbjct: 122 QCTITHPYTACLRAQFGAGCVFQMRADARLIECLER---GLIFEVEDMQREAVARSVMPF 178
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ DV+VLACTH+ + H+F+ +D+ + + RR L P Q+++ +
Sbjct: 179 QEAGVDVLVLACTHFVHVRHLFQDCVGTSCTVVDSLEGVVRRTLRLCP----PQSQLRGN 234
Query: 248 HALFLSGKPD--IAMR--RLMQGFGLK 270
A +++G D A R R Q FGL+
Sbjct: 235 AACYVTGARDAVCAARYARYAQHFGLR 261
>gi|323339853|ref|ZP_08080122.1| glutamate racemase [Lactobacillus ruminis ATCC 25644]
gi|323092726|gb|EFZ35329.1| glutamate racemase [Lactobacillus ruminis ATCC 25644]
Length = 259
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 111/245 (45%), Gaps = 12/245 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL VL++ +M +I+ D PYG + + L K+++ F
Sbjct: 10 IGIFDSGMGGLTVLRECVKIMGNEDYIFYGDSFNAPYGVKSTEQVYRLSKKIVQRFL--- 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + LR +P + +G PA+K A + ++ + +++TP TL
Sbjct: 67 -KQNVKAIVIACNTATSASASRLRKEYPELPIIGLEPALKPAVLHKKNSTVLVMATPLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL++ + Q I + + L VE +I E+KK + G
Sbjct: 126 KEKKFENLMNRFEDQAKIIKLPAPDLVEFVERG----EIDTPELKKYLRSILNPYLGN-I 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+P +Q+ V +D AR R LL N + FL
Sbjct: 181 DAVVLGCTHFPFAKRAIQQIVGNDVYVVDGGAGAARELRRLLEAKNERRKENRIGKIEFL 240
Query: 253 SGKPD 257
+ PD
Sbjct: 241 NSNPD 245
>gi|311108362|ref|YP_003981215.1| glutamate racemase [Achromobacter xylosoxidans A8]
gi|310763051|gb|ADP18500.1| glutamate racemase [Achromobacter xylosoxidans A8]
Length = 267
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 5/216 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I I+DSG+GGL VL+ +R +P + +YVAD PYG +++R + +D
Sbjct: 4 ESPIGIYDSGVGGLSVLRAIRDALPHEYLLYVADSAHVPYGEKTQDYVEQRASTI-ADYF 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q V+ACNTA +LR P + +G PAIK AA T SG++ + +T TL
Sbjct: 63 VSRQAKAMVVACNTATAAAIAQLRQRHPQLIIIGVEPAIKPAAHLTSSGVVGVFATTGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ + I VE+ G+ + E + + E
Sbjct: 123 ASPKFAALVQRQAPEVRILFRPCPEWVRLVEQ---GV-LSGPEAEAAVRAPVAELREAGA 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
DV+VL CTH+P + + + V L+ +AR
Sbjct: 179 DVLVLGCTHFPFLRDAIQAAAGPGVPLLETGAPVAR 214
>gi|258515013|ref|YP_003191235.1| glutamate racemase [Desulfotomaculum acetoxidans DSM 771]
gi|257778718|gb|ACV62612.1| glutamate racemase [Desulfotomaculum acetoxidans DSM 771]
Length = 266
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL +++++R L+PE IY AD PYG ++ R F D L K
Sbjct: 6 AIGLFDSGVGGLSIMKEVRKLLPEEDLIYFADSAYCPYGIKTPEVIRARC-FSICDFLLK 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+A NT D +R + + +G PAIK AA +++G I IL+T T+
Sbjct: 65 EGVKLIVVASNTTSVAGLDLIRKHY-RIPIVGVEPAIKPAAELSRNGKIGILATGVTING 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
S+L+ + S + L VEE E + + ++ + +D
Sbjct: 124 ERFSSLVERFGSNIEVFTQPCPGLVELVEEGKLDCPQTEALLHRYMDPMLVHG----SDT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
IVL CTHYP + + +++ + +D +++AR+ ++ +N T + SG
Sbjct: 180 IVLGCTHYPFLRSLVEKIAGPQITVIDTGEAVARQVSRIVNTLNQISTGKQGKEIFYTSG 239
>gi|169634818|ref|YP_001708554.1| putative glutamate racemase [Acinetobacter baumannii SDF]
gi|169153610|emb|CAP02797.1| putative glutamate racemase [Acinetobacter baumannii]
Length = 266
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 16/264 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL + + +R +P IY AD PYGN E + R L S+++
Sbjct: 8 IGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGNRESDWIVSRTTHLISNLVAHG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNT + + +R+ ++ + PA+K A A T S I++L+T T++
Sbjct: 68 KCKAIVIACNTMTAVAVETIRAQI-NVPLISIEPAVKPAVAMTVSKHIAVLATATTVKGK 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+LI +Y + LV + LA ++E K E+K ++ ++ D I
Sbjct: 127 NLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKVDTI 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN----THQTRVFDDHALF 251
+L CTHYP + +++ + ++ S+++ + L+ ++N + ++ +H ++
Sbjct: 183 ILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ---LIRQLNQYHLSSESPNEGNHIIW 239
Query: 252 LSGKP----DIAMRRLMQGFGLKS 271
S P D+ L + +K+
Sbjct: 240 TSSDPLEVADVTFSLLSEKLSVKA 263
>gi|291059797|gb|ADD72532.1| glutamate racemase [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 311
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 127/267 (47%), Gaps = 13/267 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+++ Q DSGIGGL +R +PE +YVAD V FPYGN + R +
Sbjct: 46 DRREQFQYAFLDSGIGGLPYAHALRVRVPEASLVYVADRVYFPYGNKSSAQIIARASAVL 105
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + P + V+ACN+ + LR+ VPAIKQA A + I +L+T
Sbjct: 106 QKVQTNFSPHIVVLACNSMSVNALEFLRAQVSVPVVG-VVPAIKQAVACSHKKHIGVLAT 164
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-IEGCFIEK 187
T+ YT+ L + + C + + L +E G+ + +++++E + +
Sbjct: 165 QCTITHPYTACLRAQFGAGCVFQMRADARLIECLER---GLIFEVEDMQREAVARSVMPF 221
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ DV+VLACTH+ + H+F+ +D+ + + RR L P Q+++ +
Sbjct: 222 QEAGVDVLVLACTHFVHVRHLFQDCVGTSCTVVDSLEGVVRRTLRLCP----PQSQLRGN 277
Query: 248 HALFLSGKPD--IAMR--RLMQGFGLK 270
A +++G D A R R Q FGL+
Sbjct: 278 AACYVTGARDAVCAARYARYAQHFGLR 304
>gi|260553350|ref|ZP_05825964.1| glutamate racemase [Acinetobacter sp. RUH2624]
gi|260405187|gb|EEW98685.1| glutamate racemase [Acinetobacter sp. RUH2624]
Length = 266
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 5/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSRYVPYGDRESDWIVSRTTHLISNLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNT + + +R+ ++ + PA+K A A T S I++L+T T+
Sbjct: 65 AQGKCKAIVVACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAMTVSKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +LI +Y + LV + LA ++E K E+K ++ ++
Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D I+L CTHYP + +++ + ++ S+++ +
Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216
>gi|226357251|ref|YP_002786991.1| glutamate racemase [Deinococcus deserti VCD115]
gi|226319241|gb|ACO47237.1| putative glutamate racemase [Deinococcus deserti VCD115]
Length = 283
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 27/254 (10%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL ++R MP ++Y+AD P G D ++ D+ D+
Sbjct: 9 VFDSGVGGLSVLAELRRAMPHEEYLYLADTAHVPIGARSDEEIR--------DLTDRAVS 60
Query: 78 VLS-------VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L V+ACNTA LR+ F ++ +G VPA+K A T+SG++ +L+TP
Sbjct: 61 ALHARGVKGVVVACNTASAFSLSHLRARF-AIPIIGLVPAVKPAVEATRSGVVGVLATPG 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASR----VEEYACGIKIKEDEIKKEIEGCFIE 186
TLR T +++I + + ++ ++ SR + E + + +E+ ++
Sbjct: 120 TLRGTLLADVIRQFADPAGVKVLQAV---SRELVPLVEAGQADSSETQAVLREVLSPLVQ 176
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D +VL CTHYP + +D+ ++AR R +L N R
Sbjct: 177 AG---ADQLVLGCTHYPFLAGSIHAEFGNCFTLVDSGAAVARHTRRVLAAENLLTARTET 233
Query: 247 DHALFL-SGKPDIA 259
+L +G D A
Sbjct: 234 GKVTYLVTGDVDAA 247
>gi|73541920|ref|YP_296440.1| glutamate racemase [Ralstonia eutropha JMP134]
gi|123624580|sp|Q46Z37|MURI_RALEJ RecName: Full=Glutamate racemase
gi|72119333|gb|AAZ61596.1| glutamate racemase [Ralstonia eutropha JMP134]
Length = 272
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 6/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++R L+P +Y+AD PYG + ++ R + +L +
Sbjct: 9 IGVFDSGLGGLSVLREIRALLPHESLLYLADSKYAPYGEKPEAFVQARTLQACEWLLAQG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA + LR T P + +G P +K AAA +QS ++ +L+T TL+
Sbjct: 69 CKAL-VIACNTATGHAVELLRQTLP-VPIIGVEPGLKPAAAASQSKVVGVLATANTLKSG 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ S + + + L +E+ I +I+ ++ D +
Sbjct: 127 KFARLLASLDGESRFICEAGLGLVPLIEQG----DIDGPDIRGRLDNYLTPMLEAGADTL 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VL CTHYP + R + + +D +IAR+
Sbjct: 183 VLGCTHYPFLSDTIRDMVGNQLTLVDTGSAIARQ 216
>gi|307730275|ref|YP_003907499.1| glutamate racemase [Burkholderia sp. CCGE1003]
gi|307584810|gb|ADN58208.1| glutamate racemase [Burkholderia sp. CCGE1003]
Length = 290
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 14/216 (6%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L +
Sbjct: 24 IFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFIADRTLAI-GEWLARQGA 82
Query: 78 VLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
VIACNTA L+++ L S+ +G P IK AA ++S + +L+T TLR
Sbjct: 83 KALVIACNTATAQSIALVRERL-----SIPLVGVEPGIKPAALQSRSRVAGVLATQVTLR 137
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
T L+ Y + C L VE G +++ + G D
Sbjct: 138 STRFQALLERYAADCRFICQPGHGLVQAVERCDVG----SAQLRALLAGYLQPMLEAGAD 193
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+VL CTHYP + R + + +D S +IAR+
Sbjct: 194 TLVLGCTHYPFLDAAIRDIVGERMALIDTSVAIARQ 229
>gi|218887895|ref|YP_002437216.1| glutamate racemase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758849|gb|ACL09748.1| glutamate racemase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 308
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 7/208 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + S ++ +
Sbjct: 32 IGMFDSGVGGLTVLKALRTRMPCEDILYLGDTARLPYGTKSAETITRYAVQAASRLVQRR 91
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+L V+ACNTA ++ D LR+ P + +G V P + A ++ G I++++T +T+R
Sbjct: 92 IKLL-VVACNTATSVALDALRAANPGLPVVGVVQPGAQAACRASRRGNIAVIATESTIRG 150
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-- 192
IH I + EE KI ED + ++ F G T
Sbjct: 151 RAYHKAIHGLRPDAQIIGQPCPLFVPLAEEGWVDGKIVEDIAARYLDPIFRPASGSDTPE 210
Query: 193 --DVIVLACTHYPLIVHVFRQ-LSPWPV 217
D +VL CTH+PL+ R + P PV
Sbjct: 211 TPDCLVLGCTHFPLLARAIRNVIGPEPV 238
>gi|332519960|ref|ZP_08396424.1| glutamate racemase [Lacinutrix algicola 5H-3-7-4]
gi|332044519|gb|EGI80713.1| glutamate racemase [Lacinutrix algicola 5H-3-7-4]
Length = 260
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+NSI IFDSG+GG + +++ L+P IY+AD PYG+ + + + ++
Sbjct: 3 KNSIGIFDSGVGGTSIFKEIHALLPNESTIYLADSKYAPYGSKTKNEIIDLSIKNTEFLI 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D ++ VIACNTA T D LR+T+ + F+G PAIK AA TQ+ I IL+T TL
Sbjct: 63 DNNCKII-VIACNTATTNAIDILRNTY-KIPFIGIEPAIKPAALQTQTKAIGILATKGTL 120
Query: 133 RRT--------YTSNL-IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
YT+ + + V + + L+ + L + E+ +KK ++
Sbjct: 121 SSALFHKTTDLYTNGIKVIEQVGEGIVQLIENGDLHTPKMEFL---------LKKYLQPM 171
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
E D +VL CTHYP ++ + L P V +D+ ++A++ + +L + N
Sbjct: 172 LAE----NIDYLVLGCTHYPYLMPILLNLLPKHVKIIDSGLAVAKQTKSVLEQYN 222
>gi|193078720|gb|ABO13787.2| Glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 266
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 5/217 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKYIRQALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLISNLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNT + + +R+ ++ + PA+K A A T S I++L+T T+
Sbjct: 65 THGKCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAMTLSKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +LI +Y + LV + LA ++E K E+K ++ ++
Sbjct: 124 KGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D I+L CTHYP + +++ + ++ S+++ +
Sbjct: 180 DTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQ 216
>gi|71892359|ref|YP_278093.1| glutamate racemase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796465|gb|AAZ41216.1| glutamate racemase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 277
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 3/193 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +ILI DSG+GGL + +R L+P ++Y D+ FPYG + + R+ + +
Sbjct: 10 QPTILILDSGVGGLSIYIAIRKLLPHVRYLYFFDNQAFPYGEHSEFFIINRVTSIIEAVQ 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q L +I CNTA + L++ F +G +PAIK A+ T++G+I +L+T T+
Sbjct: 70 EQHQLDLVIIGCNTASVVSLKILQNHFLC-PIVGVIPAIKLASKLTKNGVIGVLATHRTV 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
YT +LI + ++ + L+ + L + E G KI ++ + K+
Sbjct: 129 NHDYTLSLIKRFANKYKVMLLGTSELVNLAESKIHGKKIPISILRDILTPWLNMKQPP-- 186
Query: 193 DVIVLACTHYPLI 205
D IVL CTH+ L+
Sbjct: 187 DTIVLGCTHFSLL 199
>gi|226326749|ref|ZP_03802267.1| hypothetical protein PROPEN_00609 [Proteus penneri ATCC 35198]
gi|225204586|gb|EEG86940.1| hypothetical protein PROPEN_00609 [Proteus penneri ATCC 35198]
Length = 206
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+T AT++R YT L
Sbjct: 11 VIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLATRATVKRPYTHEL 70
Query: 141 IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
I + + C +H + S L E G ++ D ++K + KE D +VL CT
Sbjct: 71 IERFATDCKVHSLGSAELVELAERKLHGEEVSLDALRKILTPWLKMKEPP--DTVVLGCT 128
Query: 201 HYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA- 259
H+PL+ + P +D+ +IARR L+ +N + + ++ + K D
Sbjct: 129 HFPLLADELLSVLPDGTRIIDSGAAIARRTAWLV--VNQAKIKGSNEISFAYCLKEDENS 186
Query: 260 --MRRLMQGFGLKS 271
++ ++ GFG +S
Sbjct: 187 ELLKPVLAGFGFES 200
>gi|330941681|gb|EGH44456.1| glutamate racemase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 270
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 5/240 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL ++R L+ +Y+AD PYG + +R + + ++
Sbjct: 15 IFDSGVGGLSVLNEIRQLLLSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFREQGAK 74
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL+
Sbjct: 75 AL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTLQSARF 133
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + + + L +E + +I++ ++ R D I+L
Sbjct: 134 AALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARCDTIIL 189
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYP + + R++ P V +D ++AR+ + LL R + V D + S PD
Sbjct: 190 GCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVARDTVYWSSDIPD 249
>gi|170723614|ref|YP_001751302.1| glutamate racemase [Pseudomonas putida W619]
gi|229486248|sp|B1JEP3|MURI_PSEPW RecName: Full=Glutamate racemase
gi|169761617|gb|ACA74933.1| glutamate racemase [Pseudomonas putida W619]
Length = 265
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 5/239 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL VL +++ L+P +YVAD PYG +++R + ++
Sbjct: 10 VMDSGVGGLSVLAEIQRLLPSESLLYVADCGHVPYGEKTPDYIRQRCRRI-AEFFQAQGA 68
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA +LR +P +G PA+K AAA T+SG++ +L+T TL+
Sbjct: 69 KAMVLACNTATVAAVADLRERYPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSAKF 128
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ + + + L +E G ++++ + G D ++L
Sbjct: 129 AALLDRFANDVRVVTQPCPGLVELIETGDLG----SLQLRQLLLGYVQPLLAAGCDTLIL 184
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
CTHYP + + + P V +D ++AR+ + LL D A + S P
Sbjct: 185 GCTHYPFLRPLLAGMVPADVAIIDTGAAVARQLKRLLAARELLADGPARDAAFWSSADP 243
>gi|296162473|ref|ZP_06845264.1| glutamate racemase [Burkholderia sp. Ch1-1]
gi|295887286|gb|EFG67113.1| glutamate racemase [Burkholderia sp. Ch1-1]
Length = 284
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 17/233 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++ +
Sbjct: 14 IFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLVKQGAK 73
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA +R P + +G P IK AA +++ + +L+T TLR
Sbjct: 74 AL-VVACNTATAQSIAMVREKLP-IPLVGVEPGIKPAALQSKTRVAGVLATQVTLRSARF 131
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ Y + C L VE I E+ + G D +VL
Sbjct: 132 QALLERYAADCRFLCQPGHGLVQAVER----CDISSAELHALLRGYLQPMLDAGADTLVL 187
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
CTHYP + R + + +D S +IAR+ RV D H L
Sbjct: 188 GCTHYPFLDTAIRDIVGDRLVLIDTSVAIARQLE-----------RVLDQHGL 229
>gi|46579181|ref|YP_009989.1| glutamate racemase [Desulfovibrio vulgaris str. Hildenborough]
gi|120603245|ref|YP_967645.1| glutamate racemase [Desulfovibrio vulgaris DP4]
gi|46448594|gb|AAS95248.1| glutamate racemase [Desulfovibrio vulgaris str. Hildenborough]
gi|120563474|gb|ABM29218.1| glutamate racemase [Desulfovibrio vulgaris DP4]
gi|311233019|gb|ADP85873.1| glutamate racemase [Desulfovibrio vulgaris RCH1]
Length = 282
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 6/217 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + S ++++
Sbjct: 10 IGLFDSGVGGLTVLKALRQRMPCEDMLYLGDTARLPYGTKSSETIARYALQATSKLVERR 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+L V+ACNTA ++ D LR +P + +G V P + + + G I++++T +T+R
Sbjct: 70 IKLL-VVACNTATSVALDTLREAYPGIPVIGVVEPGAQASCRASLQGRIAVIATESTIRG 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG----K 190
IH Q HI + + EE I E + ++ F G +
Sbjct: 129 RAYHKAIHRLRPQAHIVGQACPLFVPLAEEGWVDGPIAESIAARYLDPIFKPASGSDRVE 188
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTH+PL+ R + V +D++ + A
Sbjct: 189 TPDCLVLGCTHFPLLARAIRNVIGPDVVIVDSAATTA 225
>gi|293607195|ref|ZP_06689536.1| glutamate racemase [Achromobacter piechaudii ATCC 43553]
gi|292814287|gb|EFF73427.1| glutamate racemase [Achromobacter piechaudii ATCC 43553]
Length = 279
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 8/239 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I ++DSG+GGL VL+ +R + + +YVAD PYG +++R + + +
Sbjct: 8 SPIGVYDSGVGGLSVLRAIRDALSDESLLYVADSAHVPYGEKSQDFVEQRALTVADYFVS 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ + V+ACNTA ++R P + +G PAIK AA T SG++ + +T TL
Sbjct: 68 RHAKAM-VVACNTATAAAIAQVRRRHPGLIVIGVEPAIKPAAHLTHSGVVGVFATTGTLA 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ + I L VE+ ++ + + G + D
Sbjct: 127 SPKFAALVQREAPEVRILLHPCPQWVRLVEQG----ELSGPAVDAAVAGPVAQLRAAGAD 182
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDDHA 249
V+VL CTH+P + + + V L+ +AR R L + T R D HA
Sbjct: 183 VLVLGCTHFPFLRDAIQAAAGPGVPLLETGAPVARWLRHQLQERALLCTDSARTADTHA 241
>gi|26987472|ref|NP_742897.1| glutamate racemase [Pseudomonas putida KT2440]
gi|38258012|sp|Q88PW2|MURI_PSEPK RecName: Full=Glutamate racemase
gi|24982136|gb|AAN66361.1|AE016264_5 glutamate racemase [Pseudomonas putida KT2440]
Length = 265
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 5/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL VL +++ L+P +YV D PYG +++R + ++
Sbjct: 8 IGVMDSGVGGLSVLAEIQRLLPNETLLYVGDCGHIPYGEKSPDYIRERCRRIAGFFHEQG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL+
Sbjct: 68 AKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSA 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + + + L +E + +++ ++G D +
Sbjct: 127 KFAALLDRFANDVQVITQPCPGLVELIEAG----DLVSPAVRQLLQGYVQPLLAAGCDTL 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+L CTHYP + + + P V +D ++AR+ + LL
Sbjct: 183 ILGCTHYPFLRPLLAGMVPDDVAIIDTGAAVARQLQRLL 221
>gi|148381502|ref|YP_001256043.1| glutamate racemase [Clostridium botulinum A str. ATCC 3502]
gi|153933747|ref|YP_001385877.1| glutamate racemase [Clostridium botulinum A str. ATCC 19397]
gi|153937684|ref|YP_001389284.1| glutamate racemase [Clostridium botulinum A str. Hall]
gi|166231033|sp|A7FZC4|MURI_CLOB1 RecName: Full=Glutamate racemase
gi|166231034|sp|A5I7T7|MURI_CLOBH RecName: Full=Glutamate racemase
gi|148290986|emb|CAL85122.1| glutamate racemase [Clostridium botulinum A str. ATCC 3502]
gi|152929791|gb|ABS35291.1| glutamate racemase [Clostridium botulinum A str. ATCC 19397]
gi|152933598|gb|ABS39097.1| glutamate racemase [Clostridium botulinum A str. Hall]
Length = 257
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 8/231 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L
Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMSK 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL+ Y I + L +E+ GI + D I ++ F + + ++ I
Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRV 244
VL CTHYP I ++++ +D S +R + L N T + RV
Sbjct: 182 VLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLTEENRV 232
>gi|295676105|ref|YP_003604629.1| glutamate racemase [Burkholderia sp. CCGE1002]
gi|295435948|gb|ADG15118.1| glutamate racemase [Burkholderia sp. CCGE1002]
Length = 295
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 6/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + +
Sbjct: 23 IGIFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFITDRTLAIGEWLAARG 82
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R P + +G P +K AA ++S + +L+T ATLR
Sbjct: 83 AKAL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKSRVAGVLATQATLRSA 140
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ Y + C L VE G E++ + D +
Sbjct: 141 RFQGLLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRSYLQPMLDAGADTL 196
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VL CTHYP + R + + +D S +IAR+
Sbjct: 197 VLGCTHYPFLDAAIRDIVGERLALIDTSVAIARQ 230
>gi|257095297|ref|YP_003168938.1| glutamate racemase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257047821|gb|ACV37009.1| glutamate racemase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 261
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 5/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL + +P +Y+AD PYG+ +D ++ R++ + ++D+
Sbjct: 2 IGVFDSGLGGLSVLAAIARALPRADLVYLADTAHVPYGDKDDAFIRSRVLRIGRHLVDQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ V+ACNTA R +FP + +G P +K AAA ++SG I++L+T +T R
Sbjct: 62 CGVI-VVACNTATAAAVAAFRESFPMLPVVGVEPGVKPAAAASRSGRIAVLATASTARSQ 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ LI + + + A+RVE +++++ + +E D I
Sbjct: 121 RLAQLIRQHAGSVRVDVEPCPGWATRVES----LRLEDPDFVEEARQHLAPLLAAGVDQI 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VL CTHY + + +D +D++AR+
Sbjct: 177 VLGCTHYAFLCPTLEPIVAQRASLVDVADAVARQ 210
>gi|187923408|ref|YP_001895050.1| glutamate racemase [Burkholderia phytofirmans PsJN]
gi|187714602|gb|ACD15826.1| glutamate racemase [Burkholderia phytofirmans PsJN]
Length = 284
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 17/238 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++
Sbjct: 9 RTPVGIFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLV 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +R P + +G P +K AA +++ + +L+T TL
Sbjct: 69 KQGAKAL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKTRVAGVLATQVTL 126
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE G E++ + G
Sbjct: 127 RSARFQALLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRGYLQPMLDAGA 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + R + + +D S +IAR+ RV D H L
Sbjct: 183 DTLVLGCTHYPFLDAAIRDIVGDRLMLIDTSIAIARQLE-----------RVLDQHGL 229
>gi|313904511|ref|ZP_07837887.1| glutamate racemase [Eubacterium cellulosolvens 6]
gi|313470653|gb|EFR65979.1| glutamate racemase [Eubacterium cellulosolvens 6]
Length = 269
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K ++ I +FDSG+GGL VL+++ +PE F+Y D PYG E +++ M +
Sbjct: 9 KYKDYIGVFDSGVGGLSVLKELVKELPEEDFLYFGDSANAPYGEKEIGTIRELSMKIADR 68
Query: 71 IL-DKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILST 128
++ D + + VIACNTA + E+R+ + M +G PA+K AA + + G I +++T
Sbjct: 69 MVADGVKTI--VIACNTATSAAVKEIRAKYQERMPIIGIEPALKPAARWKRHGRILVMAT 126
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PATL+ +L H + V LASRVE+ + E+ +E+ G + K
Sbjct: 127 PATLKLEKYEDLSHRLEGEAEFIPVMCTGLASRVEK-GKLEEEDLHELLEELLGPYRGK- 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQL 212
D IVL CTHYP + R +
Sbjct: 185 ---VDGIVLGCTHYPFVKKQIRSV 205
>gi|253681134|ref|ZP_04861937.1| glutamate racemase [Clostridium botulinum D str. 1873]
gi|253562983|gb|EES92429.1| glutamate racemase [Clostridium botulinum D str. 1873]
Length = 257
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 7/222 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSG+GGL VL++ ++P FIY D PYG + +KK L F +L Y
Sbjct: 11 FDSGVGGLSVLKEAIKILPNEDFIYYGDSKNAPYGTKKVDEVKK-LTFDAVKVLLGYNVK 69
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
V+ACNTA + ++LR+T+ M +G PA+K A + G I I++T TL +
Sbjct: 70 AIVVACNTATSAAIEDLRNTYKDMPIIGIEPALKPAVELSGDGKIVIMATNMTLAEKKFN 129
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ Y +C I + L +E+ G K+KE ++K ++K+ + +VL
Sbjct: 130 KLMSKYKDKCDIVSLPCPGLVEYIEKGIVEGKKLKEFLVEKL---SILDKD--KIASVVL 184
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
CTHYP I + V +D S A + + L + N+
Sbjct: 185 GCTHYPFIKKELYSILGDEVVIIDGSFGTANQLKRKLIKSNS 226
>gi|186476698|ref|YP_001858168.1| glutamate racemase [Burkholderia phymatum STM815]
gi|184193157|gb|ACC71122.1| glutamate racemase [Burkholderia phymatum STM815]
Length = 303
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 6/212 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL+ +R +P +YVAD + PYG +D + R + + ++ +
Sbjct: 34 IFDSGLGGLSVLRAVRSQLPSEAIVYVADSLYAPYGERDDDFIADRTLAIGEWLIAQGAK 93
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA +R P + +G P +K AA ++S + +L+T TLR
Sbjct: 94 AL-VVACNTATAQSIALVREKLP-IQLIGVEPGVKPAAQQSKSRVAGVLATRVTLRSARF 151
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ Y S C L VE I+ E++ + D +VL
Sbjct: 152 QGLLERYASDCRFLCQPGHGLVEAVER----CDIESAELRALLVSYVQPMLDAGADTLVL 207
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
CTHYP + R ++ + +D S +IAR+
Sbjct: 208 GCTHYPFLDAAIRDIAGDRLTLIDTSVAIARQ 239
>gi|224825572|ref|ZP_03698677.1| glutamate racemase [Lutiella nitroferrum 2002]
gi|224602493|gb|EEG08671.1| glutamate racemase [Lutiella nitroferrum 2002]
Length = 266
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 5/221 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V +++ L+P+ IY+AD PYG + R + ++++
Sbjct: 2 IGMFDSGLGGLSVWRELTRLLPQEPVIYLADRAYCPYGGRSHEDILARSEKITRYLVEQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ VIACNTA + ELR P + +G PA+K AA +++SG I++L+T ATL+
Sbjct: 62 ARLI-VIACNTATSAAARELRRRHPELPIVGMEPAVKPAALHSRSGQIAVLATRATLKGD 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L Y I + VE + ++ ++ +E D +
Sbjct: 121 KFLELKAQYDDSVDILPLPGDGFVELVENG----DLASEQAQRVVERQLQPLRAHTVDQV 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
VL CTHYP + + + P V +D + +++ +A LL R
Sbjct: 177 VLGCTHYPFLSPLIERALPAGVKLIDPARAVSLQAERLLQR 217
>gi|325518393|gb|EGC98114.1| glutamate racemase [Burkholderia sp. TJI49]
Length = 285
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 108/262 (41%), Gaps = 17/262 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M I + + IFDSG+GGL VL+ R +P +YVAD PYG +D +
Sbjct: 1 MTIQPAASGARPAAPVGIFDSGLGGLSVLRAARAHLPHESLVYVADTRYNPYGERDDAFI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + + L V+ACNTA +R ++ +G P IK A + S
Sbjct: 61 TERTLAIGEWFVQQGAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVQQSAS 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G+ +L+T ATLR L+ + + C L +E G ++ +
Sbjct: 119 GVAGVLATQATLRSARFQALLERHGAGCRFICQPGHGLVQAIESGDTG----SPALRALL 174
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D IVL CTHYP + R + V +D SD+IA
Sbjct: 175 DSYLRPMLDAGADAIVLGCTHYPFLTATIRDIVGERVTIVDTSDAIA-----------LQ 223
Query: 241 QTRVFDDHALFLSGKPDIAMRR 262
RV D H L G +A R
Sbjct: 224 LARVLDQHDLRAPGGAPVAPPR 245
>gi|225375887|ref|ZP_03753108.1| hypothetical protein ROSEINA2194_01523 [Roseburia inulinivorans DSM
16841]
gi|225212322|gb|EEG94676.1| hypothetical protein ROSEINA2194_01523 [Roseburia inulinivorans DSM
16841]
Length = 290
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++Q I +FDSG+GG+ VL+++ LMP +FI+ D PYG ++K L ++
Sbjct: 32 EMQRPIGVFDSGVGGISVLRELVALMPNENFIFYGDSKNAPYGTKTLEEVRK-LTLADAE 90
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L V+ACNTA + LR + + +G PA+K A + ++ + +++TP
Sbjct: 91 YLRSRNVKALVVACNTATSAAIHILREKYQKEIPVIGIEPALKPAVSVKENSRVLVMATP 150
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TLR NL+ + Q I + L VE ++ + ++ ++ F +
Sbjct: 151 MTLREKKFHNLMQKFQDQAEIISLPCPGLVEFVERG----ELSGEALEHFLKNLFAPYQE 206
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++ D +VL CTHYPL+ +++ V D AR
Sbjct: 207 RKVDAVVLGCTHYPLVRKTIQKVLGSGVAVFDGGAGTAR 245
>gi|182420059|ref|ZP_02951293.1| glutamate racemase [Clostridium butyricum 5521]
gi|237669542|ref|ZP_04529522.1| glutamate racemase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376096|gb|EDT73683.1| glutamate racemase [Clostridium butyricum 5521]
gi|237654986|gb|EEP52546.1| glutamate racemase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 256
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 105/211 (49%), Gaps = 7/211 (3%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++NS I FDSG+GGL VL++ +MP ++IY D PYG E +K L F D
Sbjct: 3 IKNSPIGFFDSGVGGLSVLKEAISIMPNENYIYFGDSKNAPYGTKELDEVK-HLTFNAVD 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + V+ACNTA + +E+R+ + +G PA+K A ++G I I++TP
Sbjct: 62 FLREKNVKAIVVACNTATSAAIEEIRNKHNDIPIIGIEPALKPAVKLKRNGKIIIMATPM 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR L+ Y +I M A VE GI ++ DE++K ++ F +
Sbjct: 122 TLREKKFKQLMVKYQEGSNI---VPMPCAGLVEFIENGI-LEGDELEKYLKNKF-DIYFD 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
IVL CTHYP I ++ + +D
Sbjct: 177 DIAAIVLGCTHYPFIKETLAKVVGSEIPLID 207
>gi|86134483|ref|ZP_01053065.1| Asp/Glu/hydantoin racemase [Polaribacter sp. MED152]
gi|85821346|gb|EAQ42493.1| Asp/Glu/hydantoin racemase [Polaribacter sp. MED152]
Length = 263
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 7/255 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K QN I FDSGIGG + +++ L+P IY++D PYG ++ L +
Sbjct: 2 KANQNPIGFFDSGIGGTSIWKEVTALLPNESTIYLSDSKNAPYGTKNKDSILD-LAIKNT 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L L V+ACNTA T D LR+ + + F+G PAIK AA T++ I IL+T
Sbjct: 61 EFLLNKNCKLIVVACNTATTNAIDYLRANY-KIPFIGIEPAIKPAALKTKTKRIGILATK 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL S L S ++ + + + E KI E+++ +
Sbjct: 120 GTLN----SALFEKTASTIDQQIIVKETIGTGLVELIEEGKIASKEMEQLLASYINPLVK 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
+ D +VL CTHYP ++ ++++ ++ +D+ ++A++ + +L + + H H
Sbjct: 176 ENIDCLVLGCTHYPYLIPAIQKITGNQLEIIDSGQAVAKQTKAILQQHDLMHNGSASAKH 235
Query: 249 ALFLSGKPDIAMRRL 263
+++ + R L
Sbjct: 236 EFYINKDKSVLERIL 250
>gi|254468115|ref|ZP_05081521.1| glutamate racemase [beta proteobacterium KB13]
gi|207086925|gb|EDZ64208.1| glutamate racemase [beta proteobacterium KB13]
Length = 263
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I+IFDSG+GG +L+++ L IYVAD+ PYG ++KR+ +FS + +Y
Sbjct: 8 IIIFDSGLGGTSILKEIISLNLSQQLIYVADNQYLPYGLQTKDFIEKRVCEIFSSLNQQY 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ SVIACNTA + LR F + P IK A T++ I IL+T T++ +
Sbjct: 68 RIEASVIACNTATAYAANSLRGKF-KFPIVAMEPGIKPAINLTKNNNIGILATEGTIKSS 126
Query: 136 YTSNLIHSYVSQCH-IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+L+ + S H I ++ + L +E + K K D I I +++E D
Sbjct: 127 RFISLVDRFTSDQHKICIIPGVGLVEEIENQSTSNK-KLDAILLPIINQLLQEEA---DT 182
Query: 195 IVLACTHYP 203
+VL CTHYP
Sbjct: 183 LVLGCTHYP 191
>gi|163753921|ref|ZP_02161044.1| glutamate racemase [Kordia algicida OT-1]
gi|161326135|gb|EDP97461.1| glutamate racemase [Kordia algicida OT-1]
Length = 259
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 16/266 (6%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ NS I IFDSG+GG + +++ +P H IY+AD PYG + L ++
Sbjct: 1 MSNSPIGIFDSGVGGTSIWREIHKRLPSEHTIYLADSKNAPYGPKGKEKIID-LSVKNTE 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L K + V+ACNTA T LR + + F+G PAIK AA T+SG I IL+T
Sbjct: 60 LLLKKGCKMIVVACNTATTNAIRHLRKNY-DVPFIGIEPAIKPAALQTKSGTIGILATKG 118
Query: 131 TLRRTYTSNLIHS----YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
TL +S L H Y + I L +E KI+ E++K ++
Sbjct: 119 TL----SSELFHKTSDLYANGVQIIEQVGEGLVPLIENG----KIESPEMEKLLKLYLTP 170
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D +VL C+HYP ++ + P V +D+ ++AR+ +L + +
Sbjct: 171 MLHANIDYLVLGCSHYPYLIPKLQSFLPKHVKIIDSGIAVARQTEAILAKHDLSTQEETR 230
Query: 247 DHALFLS-GKPDIAMRRLMQGFGLKS 271
+ +F S G P+I L F +++
Sbjct: 231 GNCIFYSNGNPEILQHILKHDFSVEA 256
>gi|237745618|ref|ZP_04576098.1| glutamate racemase [Oxalobacter formigenes HOxBLS]
gi|229376969|gb|EEO27060.1| glutamate racemase [Oxalobacter formigenes HOxBLS]
Length = 273
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P + IY AD PYG+ + + +R + L +
Sbjct: 8 IGVFDSGVGGLSVLRHIRSQLPGENLIYFADSGYAPYGDKSEEFVIERAFKIAGFFLKQG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA + LR +P + +G P +K AAA T +G++ +++T RT
Sbjct: 68 IKAL-VVACNTATAITIHLLREKYPELPIVGVEPGLKPAAAKTITGIVGVMAT----ERT 122
Query: 136 YTSN---LIHSYVS-QCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
SN ++H ++ Q +H + +A +E ++ + + +
Sbjct: 123 LASNKFHVLHQLLNDQTGVHFIMQPCPGMADLIEHE----ELDSEPVFNLVRRYLTPILE 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRARCLLP--RINTHQTR 243
+ D +VL CTHYP + HV +++ + +D ++AR+ + LL +N+
Sbjct: 179 QNADTVVLGCTHYPFVRHVIEKIAAEAGNPSLHIIDTGYAVARQLKHLLDIYGLNSKGRE 238
Query: 244 VFDDHALFLSGKPDIAMR---RLMQ 265
A F SG P R RL+Q
Sbjct: 239 TDIQTAAFTSGDPQTISRLIGRLLQ 263
>gi|134299103|ref|YP_001112599.1| glutamate racemase [Desulfotomaculum reducens MI-1]
gi|134051803|gb|ABO49774.1| glutamate racemase [Desulfotomaculum reducens MI-1]
Length = 282
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + +R L+P IY AD PYG+ + +++R + + L
Sbjct: 21 IGVFDSGVGGLSVARDIRKLLPLEDIIYYADSAYCPYGDKDPQTIRQREKAI-GEFLVSQ 79
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA + + LR F + +G P +K A A T++G I +L+T T+
Sbjct: 80 GCKLIVVACNTASSAGLEYLRR-FLKVPVVGMEPGVKPAVAATRNGKIGVLATCVTIAGD 138
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
S+L+ Y + + L +E E++++ ++ K+ D I
Sbjct: 139 RFSSLVKRYAEETEVITQPCPGLVELIESGKLNAPETEEKLRTFLQPIL----DKKADTI 194
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
VL CTHYP + + L+ V +D ++A++ +L N
Sbjct: 195 VLGCTHYPFLRPMLESLAGPGVSVIDTGQAVAKQVSRVLSACN 237
>gi|213029822|ref|ZP_03344269.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 208
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+
Sbjct: 1 MTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLA 59
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++R YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 60 TRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMP 119
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
E D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 120 EPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLL 164
>gi|32490882|ref|NP_871136.1| hypothetical protein WGLp133 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|81741819|sp|Q8D368|MURI_WIGBR RecName: Full=Glutamate racemase
gi|25166088|dbj|BAC24279.1| murI [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 268
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 5/226 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ KLQ ILIFDSGIGGL ++R +P ++IYV D+ GFPYGN + + R+ +
Sbjct: 2 KNKLQ--ILIFDSGIGGLYFYSEIRKYIPHANYIYVLDNEGFPYGNKYKNFIFDRVTNII 59
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + Y+ L+++ACNTA ++ L+ F S +G P I ++ T++ +I +L+T
Sbjct: 60 IYMHNLYKFDLTIVACNTASSIALSYLKKFFIS-PVIGIKPDINESVNITKNNIIGLLAT 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ ++ +++ + + + L EE G I ++IK ++ + K
Sbjct: 119 KITINYVLSNFFNFKSLNKIKLITLDANELIKLSEEKMRGKIIHLNKIKNILKPILLNKN 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D I+L CTH + F+++ P ++D+ + ++ L+
Sbjct: 179 --IPDTIILGCTHLLFFYYEFKKIFPIGTKFIDSKKILLNKSIMLI 222
>gi|182624295|ref|ZP_02952080.1| glutamate racemase [Clostridium perfringens D str. JGS1721]
gi|177910513|gb|EDT72886.1| glutamate racemase [Clostridium perfringens D str. JGS1721]
Length = 260
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F +
Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRS-LSFNAIE 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K VIACNTA + +LR + + +G PA+K A ++G + +++T A
Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187
TL + NL+ Y V S+ VE G ++ +++K +E ++++
Sbjct: 124 TLNQEKFKNLMDKYGEHRE---VISLPCPGLVEFIEAG-DLEGEDVKNFLREKLNPYMDR 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
E IVL CTHYP + V + + VD +D S R + L N
Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENN 227
>gi|239502810|ref|ZP_04662120.1| putative glutamate racemase [Acinetobacter baumannii AB900]
Length = 266
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 5/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 8 IGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLISNLVAHG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNT + + +R+ ++ + PA+K A A T S I +L+T T++
Sbjct: 68 KCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAMTVSKHIEVLATATTVKGK 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+LI +Y + LV + LA ++E K E+K ++ ++ D I
Sbjct: 127 NLKSLIETYAQDIKVSLVPCIGLAEKIETG----KAHTAEVKDYLKNILAPLVEQKVDTI 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+L CTHYP + + +++ + ++ S+++ +
Sbjct: 183 ILGCTHYPFVSDMIQEIVGRDIQIIEPSEAVTAQ 216
>gi|153937979|ref|YP_001392916.1| glutamate racemase [Clostridium botulinum F str. Langeland]
gi|166231035|sp|A7GJF6|MURI_CLOBL RecName: Full=Glutamate racemase
gi|152933875|gb|ABS39373.1| glutamate racemase [Clostridium botulinum F str. Langeland]
gi|295320892|gb|ADG01270.1| glutamate racemase [Clostridium botulinum F str. 230613]
Length = 257
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L
Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMNK 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELNKGGKIIIMATPMTLAEK 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL+ Y I + L +E+ GI + D I ++ F + + ++ I
Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
VL CTHYP I ++++ +D S +R + L N
Sbjct: 182 VLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSN 224
>gi|154250720|ref|YP_001411544.1| glutamate racemase [Parvibaculum lavamentivorans DS-1]
gi|154154670|gb|ABS61887.1| glutamate racemase [Parvibaculum lavamentivorans DS-1]
Length = 276
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + +I +FDSGIGG+ VL+ +R +P +Y+ D PYG +
Sbjct: 4 KSERAIGVFDSGIGGITVLKALRAALPHEDLVYLGDTARLPYGTKSPETVTAYATQATKH 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+++ + + VIACNTA + L + +G + P K A T+SG I ++ T
Sbjct: 64 LME-HGVKMVVIACNTASAVAIGPLTEALKPLPVIGVIEPGAKAGVAATKSGRIGVIGTE 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R IH+ + + + + EE ++ E K+ + F K
Sbjct: 123 ATVRGGAYMRAIHALDPKAQVTQAPCGLFVTLAEEGWTSGEVAEAAAKRYLAPLF--KGR 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+P++ + +++ V +D++ + A+ L R
Sbjct: 181 NAPDTLVLGCTHFPVLARIIKKVVGKNVKLVDSAATTAKAVEAALAEQGLASRRRGKGKT 240
Query: 250 LFLS 253
FL+
Sbjct: 241 RFLA 244
>gi|322807887|emb|CBZ05462.1| glutamate racemase [Clostridium botulinum H04402 065]
Length = 257
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L
Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMSK 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 67 GVKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL+ Y I + L +E+ GI + D I ++ F + + ++ I
Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
VL CTHYP I ++++ +D S +R + L N
Sbjct: 182 VLGCTHYPFIEETLKEITHNKACIIDGSFGTSRELKRQLKNSN 224
>gi|170758321|ref|YP_001788902.1| glutamate racemase [Clostridium botulinum A3 str. Loch Maree]
gi|229486237|sp|B1KTG4|MURI_CLOBM RecName: Full=Glutamate racemase
gi|169405310|gb|ACA53721.1| glutamate racemase [Clostridium botulinum A3 str. Loch Maree]
Length = 257
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L
Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KTLTFNATDFLMNK 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL+ Y I + L +E+ GI + D I ++ F + + ++ I
Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
VL CTHYP I ++++ +D S +R + L N
Sbjct: 182 VLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSN 224
>gi|226324711|ref|ZP_03800229.1| hypothetical protein COPCOM_02497 [Coprococcus comes ATCC 27758]
gi|225207159|gb|EEG89513.1| hypothetical protein COPCOM_02497 [Coprococcus comes ATCC 27758]
Length = 260
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 24/258 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK----KRLMFLFSDI 71
I I+DSGIGGL VL + MPE FIY AD PYG +K + L FL +
Sbjct: 3 IGIYDSGIGGLSVLHRALKKMPEAEFIYYADTKHVPYGEKTREQIKGYVEEVLNFLIAKE 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STP 129
+D VIACNTA ++ E R F ++ +G PA+K+A Q IL +TP
Sbjct: 63 VDAI-----VIACNTATSVATKEFRGEF-AVPIVGMEPAVKRALKLYQDMQKRILVTATP 116
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ +HS + + + ++ +A + ++ E+ K ++
Sbjct: 117 VTI----AGEKLHSLLEKVDTEHEVDLAPLPKLVRFAEAGRFQDPEVDKYLKNSLQSYTL 172
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDD 247
+ +VL CTH+ FR++ P + ++D ++ R+ R +LP T ++V
Sbjct: 173 NQYAAVVLGCTHFNYFKQSFRKIFPGEIHFVDGNEGTLRQLRRVLPEQTTPGEPSKV--- 229
Query: 248 HALFLSGKP--DIAMRRL 263
+ SG+P D M+++
Sbjct: 230 -TYYFSGEPADDEGMKKI 246
>gi|219850108|ref|YP_002464541.1| glutamate racemase [Chloroflexus aggregans DSM 9485]
gi|219544367|gb|ACL26105.1| glutamate racemase [Chloroflexus aggregans DSM 9485]
Length = 266
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 10/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+AD PYG ++ R + ++++
Sbjct: 2 IGIFDSGLGGLTVTRAIHERLPTADLLYLADSAYCPYGPRPVEEIRARALACGQWLVEQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA + LRST P + +G P +K A A T+ G +++++T TL
Sbjct: 62 AQIV-VVACNTATAAAIEVLRSTLP-VPVVGMEPGVKPAVAATRRGKVAVMATSGTLASD 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI++Y ++ ++ ++ L +VE A DE K + + DVI
Sbjct: 120 RFRALINAYAAEVEVYALACPDLVEQVEAGAIA-----DEYTKTLIANHLAAA-ADADVI 173
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+P + + R + V +D ++A + + RI R F +G
Sbjct: 174 VLGCTHFPPLTPLIRACAGPEVTIIDTGPAVAAQTARIAERIGLP--RGEGTLRCFTTGD 231
Query: 256 PDIAMRRLMQGFG 268
P+ + L+ +G
Sbjct: 232 PEAIAQALVHVWG 244
>gi|91774979|ref|YP_544735.1| glutamate racemase [Methylobacillus flagellatus KT]
gi|91708966|gb|ABE48894.1| glutamate racemase [Methylobacillus flagellatus KT]
Length = 270
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL VL+ ++ +P H +YVAD + PYG + +R + +++
Sbjct: 12 AIGVFDSGVGGLSVLRHIQQQLPHEHLLYVADSLNAPYGPKPQAFIIERSRNIAQFLIES 71
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA LR+ + +G PA+K AAA T+SG++ +L+T TL+
Sbjct: 72 GAKAI-VVACNTATAAAIRILRNEL-DIPVIGMEPAVKPAAAATRSGVVGVLATTGTLKS 129
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L+ Y HI +V+ + VE G ++ + + G + D
Sbjct: 130 AQFAALLEHYGK--HIKVVAQACV-GLVECIERG-ELDTPSTRALVAGYVAPLMEEGADT 185
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
IVL CTHYP I + ++ V +D ++AR+
Sbjct: 186 IVLGCTHYPFIKPLIADIAGPDVVLIDTGAAVARQ 220
>gi|319789116|ref|YP_004150749.1| glutamate racemase [Thermovibrio ammonificans HB-1]
gi|317113618|gb|ADU96108.1| glutamate racemase [Thermovibrio ammonificans HB-1]
Length = 262
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 10/222 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R L+P+ + IY D PYG + K + +L+ Y
Sbjct: 6 IGVFDSGVGGLTVLKALRELLPDENLIYFGDTARVPYGTKSPKTIIK-FSIQNTKLLESY 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNT+ + L+ FP +G V P K+A T + + ++ T AT++
Sbjct: 65 GVKMVVVACNTSSAHALEILQEEFP-FPVVGVVEPGAKEAVKSTDNRRVGVIGTEATVKS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEGKRTD 193
I S C + + + +EE +D + E+ ++ E + D
Sbjct: 124 EAYRKAIVSLDPFCTVFQKACPLFVPLIEEGWL-----KDPVTLEVARRYLGEFKEFNVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
+VL CTHYPLI V ++ P + +D+++++AR + LLP
Sbjct: 179 TLVLGCTHYPLIKEVIGEVLPG-IRLVDSAEAVAREVKRLLP 219
>gi|317050732|ref|YP_004111848.1| glutamate racemase [Desulfurispirillum indicum S5]
gi|316945816|gb|ADU65292.1| glutamate racemase [Desulfurispirillum indicum S5]
Length = 260
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 9/216 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GG+ VL+ +R +P + +Y+ D PYG + R D L
Sbjct: 2 KTIGIFDSGVGGITVLKAIRRALPTFDILYLGDTARVPYGTKSRETV-LRYSLQVGDFLY 60
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA E+R+ + + +G + P + A ++SG I+++ T AT+
Sbjct: 61 RKGIDLLVIACNTATAYGLHEIRARY-DIPVIGVIEPGAQATVALSRSGRIAVIGTSATV 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + I Y+ + ++ +L VEE CG + +++ ++ + +
Sbjct: 120 QSGQYRSTIQHYLPDADVREIACPMLVPLVEENWCGTDVAHLILQR-----YLGQLRGQV 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYP++ ++ P V +D+++ AR
Sbjct: 175 DTLVLGCTHYPMLKEDIARVLPG-VTQVDSAEETAR 209
>gi|170755805|ref|YP_001783201.1| glutamate racemase [Clostridium botulinum B1 str. Okra]
gi|229486236|sp|B1IH18|MURI_CLOBK RecName: Full=Glutamate racemase
gi|169121017|gb|ACA44853.1| glutamate racemase [Clostridium botulinum B1 str. Okra]
Length = 257
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 8/231 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L
Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMNK 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL+ Y I + L +E+ GI + D I ++ F + + ++ I
Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRV 244
VL CTHYP I ++++ +D S +R + L N + RV
Sbjct: 182 VLGCTHYPFIEKTLKEVTYNKACIIDGSFGTSRELKRQLKNSNMLREENRV 232
>gi|193213389|ref|YP_001999342.1| glutamate racemase [Chlorobaculum parvum NCIB 8327]
gi|229486233|sp|B3QQD9|MURI_CHLP8 RecName: Full=Glutamate racemase
gi|193086866|gb|ACF12142.1| glutamate racemase [Chlorobaculum parvum NCIB 8327]
Length = 272
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 22/232 (9%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSGIGGL VL+ ++ +P +Y D PYG ++K +++L
Sbjct: 10 SPIGIFDSGIGGLTVLKAVQAALPSERLLYFGDTARVPYGTKSQVTIRKYARE-DTELLM 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATL 132
K+QP L ++ACNT L D + T + +G + A + AA+ T+SG I ++ T AT
Sbjct: 69 KHQPKLIIVACNTVSALALDVVEQTAGDILVIGVLKAGAELAAHRTKSGRIGVIGTQAT- 127
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEKE-- 188
I S C I + A V AC + + E+ + +E
Sbjct: 128 --------IGSNAYSCAIREEND---ALEVTPKACPLFVPLAEEGFIDHPATRLVAEEYL 176
Query: 189 ----GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
GK D +VL CTHYP++ V ++ + +D+++++A +A+ LL +
Sbjct: 177 SAFTGKEIDTLVLGCTHYPILRKVIESIAGPQITIIDSAEAVASKAKELLSK 228
>gi|134094154|ref|YP_001099229.1| glutamate racemase [Herminiimonas arsenicoxydans]
gi|133738057|emb|CAL61102.1| Glutamate racemase [Herminiimonas arsenicoxydans]
Length = 284
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 35/252 (13%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M P + I IFDSG+G L VL+ ++ +P H + AD PYG D +
Sbjct: 1 MSFSATPDPVAAEAPIGIFDSGVGALSVLRHIQARLPSEHLLCFADSGYAPYGGKPDAEI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + +L K + V+ACNTA D LR +P + +G P +K AA +++S
Sbjct: 61 VERTLAIAAFLLTKKVKAI-VVACNTATAAAIDALRQQYPDLIVVGVEPGLKPAAVFSKS 119
Query: 121 GLISILSTPAT--------LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
G +L+T +T LR ++++Q + LV +I+
Sbjct: 120 GKAGVLATASTLASHRFIALRDQIAETTGVTFLTQACVGLVE---------------QIE 164
Query: 173 EDEIKKEIEGCFIEK------EGKRTDVIVLACTHY----PLIVHVFRQLSPWPVDWLDN 222
+ E+ +E+ G D + L CTHY PLI + + S PV +D
Sbjct: 165 KGELSSPETAAMLERYVTPLLRGG-ADTLALGCTHYPFVQPLIEAIAERESAVPVTIIDT 223
Query: 223 SDSIARRARCLL 234
++++R+ LL
Sbjct: 224 GEAVSRQLERLL 235
>gi|254185304|ref|ZP_04891892.1| glutamate racemase [Burkholderia pseudomallei 1655]
gi|184209539|gb|EDU06582.1| glutamate racemase [Burkholderia pseudomallei 1655]
Length = 290
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 17/244 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++
Sbjct: 15 RAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 74
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 75 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ + + C L +E G + +E + G
Sbjct: 133 RSARFEALLARHAADCRFLCQPGRGLVEAIERGDTGSPALRTLLASYLEPML--EAG--A 188
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP + R ++ + +D D+IAR RV D+ L
Sbjct: 189 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 237
Query: 253 SGKP 256
P
Sbjct: 238 PASP 241
>gi|168181031|ref|ZP_02615695.1| glutamate racemase [Clostridium botulinum NCTC 2916]
gi|182668118|gb|EDT80097.1| glutamate racemase [Clostridium botulinum NCTC 2916]
Length = 257
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L
Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMNK 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL+ Y I + L +E+ GI + D I ++ F + + ++ I
Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDIIYNYLKDKFSKYDNEKISSI 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
VL CTHYP I ++++ +D S +R + L N
Sbjct: 182 VLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSN 224
>gi|238750876|ref|ZP_04612374.1| Glutamate racemase [Yersinia rohdei ATCC 43380]
gi|238711020|gb|EEQ03240.1| Glutamate racemase [Yersinia rohdei ATCC 43380]
Length = 211
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
M + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++
Sbjct: 1 MEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNGVVG 59
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T T+ +YT +LI + + C I L+ S L E G + + +KK +
Sbjct: 60 LLATRGTVHASYTLDLIERFATDCKIELLGSSDLVELAETKLHGGTVPTEALKKILHPWL 119
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ +
Sbjct: 120 MMREPP--DTIVLGCTHFPLLAAELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSST 177
Query: 245 FDDHALFLSGKPDI-AMRRLMQGFGLKS 271
++ A ++ D A+ ++QG+G +
Sbjct: 178 DENIAYCMALNADTDALLPVLQGYGFPT 205
>gi|256821416|ref|YP_003145379.1| glutamate racemase [Kangiella koreensis DSM 16069]
gi|256794955|gb|ACV25611.1| glutamate racemase [Kangiella koreensis DSM 16069]
Length = 272
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 22/210 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL +L+ +R +P + +YVAD PYG L KR + + +++
Sbjct: 6 IGVFDSGVGGLSILKSIREHLPNENLLYVADSAYAPYGRLPKDILHKRCTHIANFFVEQG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA ++ + LRS F + + PAIK AA T++G I + +T TL+
Sbjct: 66 AKAM-VIACNTATAVMAEWLRSEF-DIPIIAMEPAIKPAAHATRTGKIGVFATNHTLKSD 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK--------KEIEGCFIEK 187
L+ Y +V E AC +++ E + +E
Sbjct: 124 RYKKLLTEYAKD------------KKVFESACDGFVEQVETGDLSSVKAFQLVEKYLQPM 171
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+ DV+VL CTHYP + + RQ+S V
Sbjct: 172 IDEHIDVLVLGCTHYPFLAPLMRQISSQQV 201
>gi|110801992|ref|YP_699819.1| glutamate racemase [Clostridium perfringens SM101]
gi|168213495|ref|ZP_02639120.1| glutamate racemase [Clostridium perfringens CPE str. F4969]
gi|123145852|sp|Q0SPY8|MURI_CLOPS RecName: Full=Glutamate racemase
gi|110682493|gb|ABG85863.1| glutamate racemase [Clostridium perfringens SM101]
gi|170715052|gb|EDT27234.1| glutamate racemase [Clostridium perfringens CPE str. F4969]
Length = 260
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F +
Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRS-LSFNAIE 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K VIACNTA + +LR + + +G PA+K A ++G + +++T A
Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187
TL + NL+ Y + + L +E ++ +E+K +E ++++
Sbjct: 124 TLTQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGNLEGEEVKNFLREKLNPYMDR 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E IVL CTHYP + V + + VD +D S R + L N
Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTIRELKRRLEENNMQ 229
>gi|257467248|ref|ZP_05631559.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563]
gi|315918376|ref|ZP_07914616.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563]
gi|313692251|gb|EFS29086.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563]
Length = 261
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I +FDSGIGGL VL + ++P+ +FIY AD PYG K+ ++ S+ +D
Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADVDHVPYGT----KTKEEIIKYTSEAVDFL 58
Query: 74 -KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + ELR + S+ +G PA+K+A + + +++TP T+
Sbjct: 59 VKEGVKAIVIACNTATSAAIQELRERY-SLPIIGMEPAVKKAIDFHPEKRVLVIATPMTV 117
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI-KKEIEGCFIEKEGKR 191
+ NLI ++ HLV ++ L V E+EI + E+ ++++E K+
Sbjct: 118 QGEKLHNLIEKVDTE---HLVDAIALPKLV-------TFAEEEIFEDEVISAYLQEEFKQ 167
Query: 192 TDV-----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
++ IVL CTH+ ++L P V +LD ++ ++ L IN
Sbjct: 168 LNLEDYSSIVLGCTHFNYFKESLKKLLPKGVKFLDGNEGTIKKLISELENINA 220
>gi|257451947|ref|ZP_05617246.1| glutamate racemase [Fusobacterium sp. 3_1_5R]
gi|317058497|ref|ZP_07922982.1| glutamate racemase [Fusobacterium sp. 3_1_5R]
gi|313684173|gb|EFS21008.1| glutamate racemase [Fusobacterium sp. 3_1_5R]
Length = 261
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 118/232 (50%), Gaps = 22/232 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I +FDSGIGGL VL + ++P+ +FIY AD PYG K+ ++ S+ +D
Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADVDHVPYGT----KTKEEIIKYTSEAVDFL 58
Query: 74 -KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + ELR + S+ +G PA+K+A + + +++TP T+
Sbjct: 59 VKEGVKAIVIACNTATSAAIQELRERY-SLPIIGMEPAVKKAIDFHPEKRVLVIATPMTV 117
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NLI ++ HLV ++ L V +A +E+ + E+ ++++E K+
Sbjct: 118 QGEKLHNLIEKVDTE---HLVDAIALPKLV-TFA-----EEEMFEDEVVSAYLQEEFKQL 168
Query: 193 DV-----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
++ IVL CTH+ ++L P V +LD ++ ++ L IN
Sbjct: 169 NLEDYSSIVLGCTHFNYFKESLKKLLPKGVKFLDGNEGTIKKLISELENINA 220
>gi|113868495|ref|YP_726984.1| glutamate racemase [Ralstonia eutropha H16]
gi|113527271|emb|CAJ93616.1| glutamate racemase [Ralstonia eutropha H16]
Length = 269
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 13/252 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++R L+P +Y+AD PYG + ++ R + ++ +
Sbjct: 6 IGVFDSGLGGLSVLREIRALLPHESVLYLADSKYAPYGEKPEKFVEARTLQACEWLIAQG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA + LR P + +G P +K AAA ++S ++ +L+T TL+
Sbjct: 66 CKAL-VIACNTATGHAVELLRKQLP-LPIIGVEPGLKPAAAASRSKVVGVLATANTLKSA 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ S + + + L S +E+ I +++ ++ D +
Sbjct: 124 KFARLLASLDGESRFICEAGLGLVSLIEQG----DIDGPAVRERLDTYLTPMLEAGADTL 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---HALFL 252
VL CTHYP + R + + +D +IAR+ L ++ H+ D H F
Sbjct: 180 VLGCTHYPFLSGTIRAMVGDQLALVDTGSAIARQ---LARKLAEHKLAAAPDATPHDRFA 236
Query: 253 SGKPDIAMRRLM 264
S K D A R M
Sbjct: 237 STK-DAAHLRAM 247
>gi|254264436|ref|ZP_04955301.1| glutamate racemase [Burkholderia pseudomallei 1710a]
gi|254215438|gb|EET04823.1| glutamate racemase [Burkholderia pseudomallei 1710a]
Length = 302
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 17/244 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++
Sbjct: 27 RAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 86
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 87 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 144
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ + + C L +E G + +E + G
Sbjct: 145 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--A 200
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP + R ++ + +D D+IAR RV D+ L
Sbjct: 201 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 249
Query: 253 SGKP 256
P
Sbjct: 250 PASP 253
>gi|194334596|ref|YP_002016456.1| glutamate racemase [Prosthecochloris aestuarii DSM 271]
gi|229486246|sp|B4S417|MURI_PROA2 RecName: Full=Glutamate racemase
gi|194312414|gb|ACF46809.1| glutamate racemase [Prosthecochloris aestuarii DSM 271]
Length = 269
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ + IFDSGIGGL V++ M+ ++P IY D PYG+ ++K + D L
Sbjct: 5 ESPVGIFDSGIGGLTVVRAMQAMLPAEQIIYFGDTARVPYGSKSQVTIRK---YAHEDTL 61
Query: 73 D--KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTP 129
KYQP + +IACNT L D + ST + LG + A + A T +G I ++ T
Sbjct: 62 TLMKYQPKMIIIACNTVSALGLDVVESTGKGVTVLGVLKAGAELAVRETLNGRIGVIGTQ 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC---GIKIKEDEIKKEIEGCFIE 186
AT+ + I + + + + + EE K+ +E E+ C I
Sbjct: 122 ATICSNAYACEITALAPEIQVFSKACPLFVPLAEEGFINHPASKLIAEEYLDELLCCNI- 180
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYP++ + ++++ + +D+++++A AR LL
Sbjct: 181 ------DTLVLGCTHYPILKTMIQEITGPDIRIIDSAEAVAAGARTLL 222
>gi|126442693|ref|YP_001061621.1| glutamate racemase [Burkholderia pseudomallei 668]
gi|126222184|gb|ABN85689.1| glutamate racemase [Burkholderia pseudomallei 668]
Length = 290
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 17/241 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ +
Sbjct: 18 IGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLVAQG 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR
Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRSA 135
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ + + C L +E G + +E + G D +
Sbjct: 136 RFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRTLLASYLEPML--EAG--ADTL 191
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + R ++ + +D D+IAR RV D+ L
Sbjct: 192 VLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRAPAS 240
Query: 256 P 256
P
Sbjct: 241 P 241
>gi|126458024|ref|YP_001074561.1| glutamate racemase [Burkholderia pseudomallei 1106a]
gi|167722449|ref|ZP_02405685.1| glutamate racemase [Burkholderia pseudomallei DM98]
gi|167826991|ref|ZP_02458462.1| glutamate racemase [Burkholderia pseudomallei 9]
gi|167848505|ref|ZP_02474013.1| glutamate racemase [Burkholderia pseudomallei B7210]
gi|167897057|ref|ZP_02484459.1| glutamate racemase [Burkholderia pseudomallei 7894]
gi|167905441|ref|ZP_02492646.1| glutamate racemase [Burkholderia pseudomallei NCTC 13177]
gi|167913734|ref|ZP_02500825.1| glutamate racemase [Burkholderia pseudomallei 112]
gi|167921675|ref|ZP_02508766.1| glutamate racemase [Burkholderia pseudomallei BCC215]
gi|217424462|ref|ZP_03455960.1| glutamate racemase [Burkholderia pseudomallei 576]
gi|226199169|ref|ZP_03794730.1| glutamate racemase [Burkholderia pseudomallei Pakistan 9]
gi|242313204|ref|ZP_04812221.1| glutamate racemase [Burkholderia pseudomallei 1106b]
gi|254198957|ref|ZP_04905375.1| glutamate racemase [Burkholderia pseudomallei S13]
gi|254296816|ref|ZP_04964270.1| glutamate racemase [Burkholderia pseudomallei 406e]
gi|126231792|gb|ABN95205.1| glutamate racemase [Burkholderia pseudomallei 1106a]
gi|157806660|gb|EDO83830.1| glutamate racemase [Burkholderia pseudomallei 406e]
gi|169657129|gb|EDS88523.1| glutamate racemase [Burkholderia pseudomallei S13]
gi|217392386|gb|EEC32410.1| glutamate racemase [Burkholderia pseudomallei 576]
gi|225928768|gb|EEH24794.1| glutamate racemase [Burkholderia pseudomallei Pakistan 9]
gi|242136443|gb|EES22846.1| glutamate racemase [Burkholderia pseudomallei 1106b]
Length = 290
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 17/241 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ +
Sbjct: 18 IGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLVAQG 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR
Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRSA 135
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ + + C L +E G + +E + G D +
Sbjct: 136 RFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--ADTL 191
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + R ++ + +D D+IAR RV D+ L
Sbjct: 192 VLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRAPAS 240
Query: 256 P 256
P
Sbjct: 241 P 241
>gi|76818560|ref|YP_337086.1| glutamate racemase [Burkholderia pseudomallei 1710b]
gi|254187190|ref|ZP_04893704.1| glutamate racemase [Burkholderia pseudomallei Pasteur 52237]
gi|76583033|gb|ABA52507.1| glutamate racemase [Burkholderia pseudomallei 1710b]
gi|157934872|gb|EDO90542.1| glutamate racemase [Burkholderia pseudomallei Pasteur 52237]
Length = 290
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 17/244 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++
Sbjct: 15 RAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 74
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 75 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ + + C L +E G + +E + G
Sbjct: 133 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--A 188
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP + R ++ + +D D+IAR RV D+ L
Sbjct: 189 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 237
Query: 253 SGKP 256
P
Sbjct: 238 PASP 241
>gi|168183642|ref|ZP_02618306.1| glutamate racemase [Clostridium botulinum Bf]
gi|237797023|ref|YP_002864575.1| glutamate racemase [Clostridium botulinum Ba4 str. 657]
gi|259509811|sp|C3KWB8|MURI_CLOB6 RecName: Full=Glutamate racemase
gi|182673216|gb|EDT85177.1| glutamate racemase [Clostridium botulinum Bf]
gi|229262938|gb|ACQ53971.1| glutamate racemase [Clostridium botulinum Ba4 str. 657]
Length = 257
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L
Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNTPYGTKKVEEV-KALTFNATDFLMSK 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 67 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL+ Y I + L +E+ GI + D I ++ F + + ++ I
Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDDEKISSI 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
VL CTHYP + ++++ +D S +R + L N
Sbjct: 182 VLGCTHYPFVEETLKEVTHNKACIIDGSFGTSRELKRQLKNSN 224
>gi|331270559|ref|YP_004397051.1| glutamate racemase [Clostridium botulinum BKT015925]
gi|329127109|gb|AEB77054.1| glutamate racemase [Clostridium botulinum BKT015925]
Length = 257
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSG+GGL VL++ ++P FIY D PYG + +KK L F +L Y
Sbjct: 11 FDSGVGGLSVLKEAIKILPNEDFIYFGDSKNAPYGTKKVDEVKK-LTFDAVKMLLDYNVK 69
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
V+ACNTA + ++LR+T+ + +G PA+K A +Q G I I++T TL +
Sbjct: 70 AIVVACNTATSAAIEDLRNTYKDIPIIGIEPALKPAVELSQDGKIVIMATNMTLAEKKFN 129
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
L+ Y + I S+ VE GI ++ E+ + + G + + +VL
Sbjct: 130 KLMSKYKDEYDI---VSLPCPGLVEYIEKGI-VQGKELNEFLSGRLSILDKDKIASVVLG 185
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
CTHYP + + V +D S A + + L + N+
Sbjct: 186 CTHYPFVKKELSNILGDEVVIIDGSFGTASQLKRKLIKNNS 226
>gi|110800511|ref|YP_697257.1| glutamate racemase [Clostridium perfringens ATCC 13124]
gi|168209809|ref|ZP_02635434.1| glutamate racemase [Clostridium perfringens B str. ATCC 3626]
gi|123049548|sp|Q0TM83|MURI_CLOP1 RecName: Full=Glutamate racemase
gi|110675158|gb|ABG84145.1| glutamate racemase [Clostridium perfringens ATCC 13124]
gi|170712130|gb|EDT24312.1| glutamate racemase [Clostridium perfringens B str. ATCC 3626]
Length = 260
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F +
Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRS-LSFNAIE 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K VIACNTA + +LR + + +G PA+K A ++G + +++T A
Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187
TL + NL+ Y + + L +E ++ +++K +E ++++
Sbjct: 124 TLNQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDR 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
E IVL CTHYP + V + + VD +D S R + L N
Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENN 227
>gi|315648405|ref|ZP_07901504.1| glutamate racemase [Paenibacillus vortex V453]
gi|315276099|gb|EFU39445.1| glutamate racemase [Paenibacillus vortex V453]
Length = 267
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GGL VL +P+ F++ AD + PYG +K + I+ +
Sbjct: 3 IAFFDSGLGGLTVLSAAMRELPQEDFLFFADTLHVPYGTKAKEDVKSYIHDAIKTIMQEE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133
+ VIACNTA ++ ELR T+P + +G PA+K A +S I + +TP TLR
Sbjct: 63 VKAI-VIACNTATSMAISELRRTYP-IPIIGMEPAVKPAVEINRSSGKRILVFATPLTLR 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI----KIKEDEIKKEIEGCFIEKEG 189
+ +L+ S +H+V S+ L V EY + KI ++++G + + G
Sbjct: 121 ESKYRDLVRRVDS---MHIVDSLPLPELV-EYCEALNFDQKIMNAYFTEKLDGFDLNEYG 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR------RARCLLPRINTHQTR 243
+VL CTHYP + L P + +D S RA LL T R
Sbjct: 177 ----TVVLGCTHYPFYKKILSDLLPEHIQIIDGSTGTVNRLIQVLRANDLLSSSGTQDVR 232
Query: 244 VFD 246
+ +
Sbjct: 233 LLN 235
>gi|50086249|ref|YP_047759.1| glutamate racemase [Acinetobacter sp. ADP1]
gi|49532225|emb|CAG69937.1| glutamate racemase [Acinetobacter sp. ADP1]
Length = 292
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 13/225 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL + Q++ +P +Y AD PYG DH +++ L + L +
Sbjct: 23 IGIFDSGIGGLSIAQEIANYLPNEQIVYYADTAFVPYGPRPDHEIRQ-LTARGIEWLYRQ 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++V+ACNTA D LR + S +G VPA+K A +QS ++++L+TPAT R
Sbjct: 82 GCKMAVVACNTASAFSLDGLREHYGESFPIVGLVPALKPAVLQSQSKVVAVLATPATFRG 141
Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEGK 190
++I+ + S + V+ + L +E G ++ + ++ ++I I++
Sbjct: 142 QLIKDVIYHFALPSGVQVLPVTCLELVPLIE---AGQQMSQPCLDLLRQILTPVIDQGA- 197
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
D +VL CTHYP + L + +D+ +AR+ AR L+
Sbjct: 198 --DYLVLGCTHYPFLKDAIHYLFGNRLTLIDSGAPVARQTARILI 240
>gi|134283052|ref|ZP_01769754.1| glutamate racemase [Burkholderia pseudomallei 305]
gi|237509359|ref|ZP_04522074.1| glutamate racemase [Burkholderia pseudomallei MSHR346]
gi|134245700|gb|EBA45792.1| glutamate racemase [Burkholderia pseudomallei 305]
gi|235001564|gb|EEP50988.1| glutamate racemase [Burkholderia pseudomallei MSHR346]
Length = 290
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 17/241 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ +
Sbjct: 18 IGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLVAQG 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR
Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRSA 135
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ + + C L +E G + +E + G D +
Sbjct: 136 RFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--ADTL 191
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + R ++ + +D D+IAR RV D+ L
Sbjct: 192 VLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRAPAS 240
Query: 256 P 256
P
Sbjct: 241 P 241
>gi|53721405|ref|YP_110390.1| glutamate racemase [Burkholderia pseudomallei K96243]
gi|167818613|ref|ZP_02450293.1| glutamate racemase [Burkholderia pseudomallei 91]
gi|52211819|emb|CAH37818.1| putative glutamate racemase [Burkholderia pseudomallei K96243]
Length = 290
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 17/244 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++
Sbjct: 15 RAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 74
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 75 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ + + C L +E G + +E + G
Sbjct: 133 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--A 188
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP + R ++ + +D D+IAR RV D+ L
Sbjct: 189 DTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 237
Query: 253 SGKP 256
P
Sbjct: 238 PASP 241
>gi|237744604|ref|ZP_04575085.1| glutamate racemase [Fusobacterium sp. 7_1]
gi|256027373|ref|ZP_05441207.1| glutamate racemase [Fusobacterium sp. D11]
gi|260494464|ref|ZP_05814594.1| glutamate racemase [Fusobacterium sp. 3_1_33]
gi|289765339|ref|ZP_06524717.1| glutamate racemase [Fusobacterium sp. D11]
gi|229431833|gb|EEO42045.1| glutamate racemase [Fusobacterium sp. 7_1]
gi|260197626|gb|EEW95143.1| glutamate racemase [Fusobacterium sp. 3_1_33]
gi|289716894|gb|EFD80906.1| glutamate racemase [Fusobacterium sp. D11]
Length = 264
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 9/224 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D K
Sbjct: 8 IGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFVKN 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T
Sbjct: 68 NCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKNTKNKNIAVISTKFTAES 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
N S+ ++ ++ + A +E G ++ +KE+ ++ + K TD
Sbjct: 127 HGYKNKAKMLDSELNVKEIACIEFAQMIE---SGWDTFDN--RKELLNKYLSEIPKNTDT 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+VL CTHYPLI + + V +D + I RA L +N
Sbjct: 182 LVLGCTHYPLIRKDIEKNTKIKV--VDPAVEIVERATQTLTSLN 223
>gi|170694655|ref|ZP_02885807.1| glutamate racemase [Burkholderia graminis C4D1M]
gi|170140537|gb|EDT08713.1| glutamate racemase [Burkholderia graminis C4D1M]
Length = 295
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 14/216 (6%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L +
Sbjct: 25 IFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFIADRTLAI-GEWLARQGA 83
Query: 78 VLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ACNTA L++++L S+ +G P IK AA +++ + +L+T TLR
Sbjct: 84 KALIVACNTATAQSIALVREKL-----SIPLVGVEPGIKPAALQSKTRVAGVLATQVTLR 138
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ Y + C L VE G E++ + D
Sbjct: 139 SARFQALLERYAADCRFICQPGHGLVQAVERCDVG----STELRALLASYLEPMLAAGAD 194
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+VL CTHYP + R + + +D S +IAR+
Sbjct: 195 TLVLGCTHYPFLDAAIRDIVGDRMALIDTSVAIARQ 230
>gi|51891480|ref|YP_074171.1| glutamate racemase [Symbiobacterium thermophilum IAM 14863]
gi|81610699|sp|Q67SL6|MURI_SYMTH RecName: Full=Glutamate racemase
gi|51855169|dbj|BAD39327.1| glutamate racemase [Symbiobacterium thermophilum IAM 14863]
Length = 277
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLMFLFS 69
Q I +FDSG GGL V + + L+P+ + IY D FPYG E A +R M F
Sbjct: 9 QRPIGLFDSGEGGLTVARAVADLLPQENLIYACDTAHFPYGPRPLAEVRAFFRRFMEFFV 68
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ K L ++ACNTA D L + FP A P AA + +G I + +T
Sbjct: 69 EQNCK----LVIVACNTATAAAIDLLLADAFPIPALGVVQPGAAMAAEASVTGRIGVAAT 124
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T I + ++ + IL R EE G+ I E+++E+E C
Sbjct: 125 QGTCDSGIYPQTIRLFRPDAYVVQQACPILVIRAEE---GV-ISGPEVRREVERCLAPIL 180
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA-------RRARCLLPRINTHQ 241
+R D +VL CTH+P + V + + V +D + A RR L P Q
Sbjct: 181 AERVDTLVLGCTHFPHMAKVIQDVVGPAVRLVDPGKATAVQVADLLRRRGLLNPGPGPGQ 240
Query: 242 TRVF 245
R F
Sbjct: 241 RRAF 244
>gi|194290129|ref|YP_002006036.1| glutamate racemase [Cupriavidus taiwanensis LMG 19424]
gi|193223964|emb|CAQ69973.1| GLUTAMATE RACEMASE PROTEIN [Cupriavidus taiwanensis LMG 19424]
Length = 269
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 7/249 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++R L+P +Y+AD PYG +H ++ R + ++ +
Sbjct: 6 IGVFDSGLGGLSVLREIRALLPHEPLLYLADSKYAPYGEKPEHFVEARTLQACEWMIGQG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA LR P + +G P +K AAA + S ++ +L+T TL+
Sbjct: 66 CKAL-VIACNTATGHAVALLRERLP-VPIIGVEPGLKPAAAASISKVVGVLATANTLKSA 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ S + + + L + VE+ ++ +++ +E D +
Sbjct: 124 KFARLLASLDGESRFLCQAGLGLVTLVEQG----QLDGPAVRERLEAYLKPMLDAGADTL 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + R ++ + +D ++AR+ L H FLS K
Sbjct: 180 VLGCTHYPFLEGAIRAIAGDRLALVDTGIAVARQLARKLDEHALAALPGAAGHDRFLSTK 239
Query: 256 PDIAMRRLM 264
D A R M
Sbjct: 240 -DAAHLRAM 247
>gi|18311550|ref|NP_563484.1| glutamate racemase [Clostridium perfringens str. 13]
gi|20177975|sp|Q8XHB7|MURI_CLOPE RecName: Full=Glutamate racemase
gi|18146234|dbj|BAB82274.1| probable glutamate racemase [Clostridium perfringens str. 13]
Length = 260
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F +
Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIR-SLSFNAIE 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K VIACNTA + +LR + + +G PA+K A ++G + +++T A
Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187
TL + NL+ Y + + L +E ++ +++K +E ++++
Sbjct: 124 TLTQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDR 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
E IVL CTHYP + V + L VD +D S R + L N
Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDLVGEKVDIIDGSSGTIRELKRRLEENN 227
>gi|153952784|ref|YP_001393549.1| glutamate racemase [Clostridium kluyveri DSM 555]
gi|219853449|ref|YP_002470571.1| hypothetical protein CKR_0106 [Clostridium kluyveri NBRC 12016]
gi|189030359|sp|A5N4H0|MURI_CLOK5 RecName: Full=Glutamate racemase
gi|254766113|sp|B9DY32|MURI_CLOK1 RecName: Full=Glutamate racemase
gi|146345665|gb|EDK32201.1| MurI [Clostridium kluyveri DSM 555]
gi|219567173|dbj|BAH05157.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 257
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSG+GG+ VL++ ++ +F+Y D PYG +KK L F + L K
Sbjct: 11 FDSGVGGISVLKEAVKILSNENFVYFGDSKMAPYGVRTVEEVKK-LTFNAVEFLLKKNIK 69
Query: 79 LSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA + +LR + M +G PA+K A + G I I++TP TL +
Sbjct: 70 ALVVACNTATSAAIIDLRKAYSKYMPIVGIEPALKPAVECNRKGNIIIMATPMTLAESKF 129
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+NL+ Y S +I + L +EE K + +EI++ +E I +G +VL
Sbjct: 130 NNLMKRY-SNSNILPLPCSGLVELIEEG----KTEGEEIERYLEEKLIPLKGNGIAAVVL 184
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
CTHYP I ++ V LD S R+ +
Sbjct: 185 GCTHYPFIKKSISKVLNQDVLILDGSKGTVRQLK 218
>gi|262375099|ref|ZP_06068333.1| glutamate racemase [Acinetobacter lwoffii SH145]
gi|262310112|gb|EEY91241.1| glutamate racemase [Acinetobacter lwoffii SH145]
Length = 290
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 15/258 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V ++ +P F+Y AD PYG +D ++ L + L +
Sbjct: 23 IGIFDSGVGGLSVALEIARHLPNERFVYYADTAHVPYGPRDDQEIRA-LTAQAIEWLYRQ 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++V+ACNTA D LR + + +G VPA+K A TQS +++L+TPAT R
Sbjct: 82 GCKVAVVACNTASAFSLDYLRDYYGENFPIIGLVPALKPAVLNTQSKTVAVLATPATFRG 141
Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIK--KEIEGCFIEKEGK 190
++I + +Q + V+S+ L VE G ++ ++ KEI +++
Sbjct: 142 QLIKDVISRFAEPAQVKVLPVTSLDLVPFVE---AGEQMSAACLQTLKEILQPVVDQGA- 197
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDD 247
D +VL CTHYP + + + + +D+ ++AR+ +L + + H+++
Sbjct: 198 --DYLVLGCTHYPFLKSSIQYIFGQKLTLIDSGFAVARQTAQILIKNGLLFEHESKESVK 255
Query: 248 HALFLSGKPDIAMRRLMQ 265
L +SG+ +R ++Q
Sbjct: 256 IELVVSGQNAEQLRPILQ 273
>gi|225027973|ref|ZP_03717165.1| hypothetical protein EUBHAL_02233 [Eubacterium hallii DSM 3353]
gi|224954687|gb|EEG35896.1| hypothetical protein EUBHAL_02233 [Eubacterium hallii DSM 3353]
Length = 274
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 4/219 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+L + I +FDSG+GG+ VL++M LMP FIY D PYG ++ + +
Sbjct: 18 QLSDPIAVFDSGMGGISVLREMTKLMPNEDFIYYGDSKHAPYGTKTLEEVRTLTIEHITY 77
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + +ACNTA + LR +P + +G PAIK A T + +++TP
Sbjct: 78 LIKEKHAKAVAVACNTATSAAVRILRDMYPDLPLVGVEPAIKPAVLATGHAKVVVMATPM 137
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR L Y Q I+ + L VE+ GI + ++++ + + K
Sbjct: 138 TLREEKFHKLESLYDEQADIYPLPCPGLMEFVEQ---GI-LSGEKLETFLHNLLDPYKDK 193
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
IVL CTHYP + ++++ V D A+
Sbjct: 194 DITGIVLGCTHYPFLKETIQKIAGPSVTIFDGGYGTAKE 232
>gi|118445076|ref|YP_879120.1| glutamate racemase [Clostridium novyi NT]
gi|166231036|sp|A0Q3B8|MURI_CLONN RecName: Full=Glutamate racemase
gi|118135532|gb|ABK62576.1| glutamate racemase [Clostridium novyi NT]
Length = 259
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSG+GGL VL++ ++P FIY D PYG +KK L F + L +
Sbjct: 11 FDSGVGGLSVLREAIKVLPNEDFIYFGDSKNAPYGTKTVDEVKK-LTFNAVEFLLGHNVK 69
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
VIACNTA + ++LR+++ + +G PA+K A + G I +++TP TL +
Sbjct: 70 AVVIACNTATSAAIEDLRNSYKDIPIIGIEPALKPAVELNKKGKIVVMATPMTLAEKKFN 129
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+L+ Y + + S+ VE GI +K E+ ++ + K +VL
Sbjct: 130 DLMAKYKGRSEM---VSLPCPGLVEYVEKGI-VKGQELNNYLQKKLSIIDKKEISSVVLG 185
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNS 223
CTHYP I ++ V +D S
Sbjct: 186 CTHYPFIKEELSKILGEDVVIIDGS 210
>gi|7415851|dbj|BAA93558.1| glutamate racemase [Escherichia coli O157:H7]
Length = 209
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 3/166 (1%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T
Sbjct: 1 TAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLAT 59
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 60 RGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKE 119
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 120 PP--DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLL 163
>gi|91216701|ref|ZP_01253666.1| glutamate racemase [Psychroflexus torquis ATCC 700755]
gi|91185170|gb|EAS71548.1| glutamate racemase [Psychroflexus torquis ATCC 700755]
Length = 262
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 115/219 (52%), Gaps = 6/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+++FDSG+GG +L+++ L+P + +Y+AD PYG + L +++ +
Sbjct: 6 VVLFDSGVGGTSLLKEIIHLLPHENIVYLADSKNAPYGLRTSQDIIA-LSIKNTELAIQL 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ + V+ACNTA T LRS + S+ F+G PAIK AA +++ I +L+T TL
Sbjct: 65 KAKMIVVACNTATTNAISFLRSNY-SLPFIGIEPAIKPAALNSKAKRIGVLATKGTLSSE 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
S+ ++ V + VE + + + ++I+ FI+++ D +
Sbjct: 124 LFKQTSESFTEGVNVIEVIGKGIVEAVEGGWTNDERFINNLNQQIQ-PFIKED---IDYL 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+P I+ R+L P V +D+ ++A++ + +L
Sbjct: 180 VLGCTHFPYIIPKLRELLPKHVTLIDSGRAVAKQTKAIL 218
>gi|296186868|ref|ZP_06855269.1| glutamate racemase [Clostridium carboxidivorans P7]
gi|296048582|gb|EFG88015.1| glutamate racemase [Clostridium carboxidivorans P7]
Length = 259
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 10/211 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWEDHALKKRLMFLFSDILD 73
I FDSG+GG+ VL++ L+P F+Y D PYG E+ + RL F + L
Sbjct: 8 IGFFDSGVGGISVLKEAVKLLPGEDFVYFGDSNNAPYGIKTVEEAS---RLTFEAVEFLI 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA + +LR + S M +G PA+K A + G I +++TP TL
Sbjct: 65 SKNIKAVVIACNTATSAAIIDLRKKYSSVMPVIGIEPALKPAVELKRKGQIVVMATPMTL 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL++ Y +Q ++ + L +E+ + E ++ +IE +++EG
Sbjct: 125 AERKFNNLMNRYKNQAQMYPMPCPGLVELIEQGMVEGEEVEKYLRDKIEP--LKEEG--I 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
IVL CTHYP I +L V +D S
Sbjct: 181 AAIVLGCTHYPFIKKTLSKLLNNEVPIIDGS 211
>gi|94969536|ref|YP_591584.1| glutamate racemase [Candidatus Koribacter versatilis Ellin345]
gi|166231022|sp|Q1INP0|MURI_ACIBL RecName: Full=Glutamate racemase
gi|94551586|gb|ABF41510.1| glutamate racemase [Candidatus Koribacter versatilis Ellin345]
Length = 291
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 112/217 (51%), Gaps = 12/217 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+++ L+P ++Y D PYG + R L+
Sbjct: 8 IGVFDSGFGGLTVLREIVRLVPNAEYLYFGDTARLPYGTKSADTVA-RYALGACHFLEGQ 66
Query: 76 QPVLSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
VIACNTA L D E ++ P++ + P AAA +++ ++++ T AT+
Sbjct: 67 GAEHLVIACNTATALAMDAIEAKANVPAIGVV--EPGASAAAAISKTRSVAVIGTEATI- 123
Query: 134 RTYTSNLIHSYVSQCHIHLV--SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+S+ H + + I+ ++ +L VEE + + + ++ F+ +E +R
Sbjct: 124 ---SSHAYHHALERLGINAYEKATPLLVPLVEEGWTDHPVTKQVAEIYLQDAFVRRE-QR 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+DV+VL CTHYPLI + R++ P V +D+++S A+
Sbjct: 180 SDVLVLGCTHYPLIRPLLRKVVPSDVAIVDSAESTAK 216
>gi|168205832|ref|ZP_02631837.1| glutamate racemase [Clostridium perfringens E str. JGS1987]
gi|169343233|ref|ZP_02864244.1| glutamate racemase [Clostridium perfringens C str. JGS1495]
gi|169298531|gb|EDS80612.1| glutamate racemase [Clostridium perfringens C str. JGS1495]
gi|170662679|gb|EDT15362.1| glutamate racemase [Clostridium perfringens E str. JGS1987]
Length = 260
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F +
Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRS-LSFNAIE 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K VIACNTA + +LR + + +G PA+K A ++G + +++T A
Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187
TL + NL+ Y + + L +E ++ +++K +E ++++
Sbjct: 124 TLTQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDR 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
E IVL CTHYP + V + + VD +D S R + L N
Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENN 227
>gi|126663124|ref|ZP_01734122.1| glutamate racemase [Flavobacteria bacterium BAL38]
gi|126624782|gb|EAZ95472.1| glutamate racemase [Flavobacteria bacterium BAL38]
Length = 259
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 130/255 (50%), Gaps = 24/255 (9%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS--- 69
+N I +FDSGIGG + +++ L+P + IY+AD PYG K+ ++ L S
Sbjct: 4 ENPIGLFDSGIGGTSIWKEVHSLLPNENTIYLADSKNAPYG----LKSKEEIIALSSKNT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++L + ++ACNTA T ELR+ + + F+G PAIK AA +++ I IL+T
Sbjct: 60 ELLLNLNCKIIIVACNTATTNAIKELRAKY-DVPFIGIEPAIKPAAIQSKTQKIGILATK 118
Query: 130 ATLRRTYTSNLIH-SYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
TL S L H S + + ++ + L +E ED +K + IE
Sbjct: 119 GTLN----SELFHISAANHPEVKIIEQIGHGLVQLIENGDIDSAEMEDLLKSYL-NPMIE 173
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTR 243
K D +VL C+HYP ++ +++ P + +D+ +++A++ + +L + INT + +
Sbjct: 174 ---KNIDFLVLGCSHYPYLIPQIKKIIPAKIRIIDSGEAVAKQTQNILEQNFLINTSKNK 230
Query: 244 VFDDHALFLSGKPDI 258
+ + +P++
Sbjct: 231 --SSQIFYTNSEPEV 243
>gi|167772360|ref|ZP_02444413.1| hypothetical protein ANACOL_03737 [Anaerotruncus colihominis DSM
17241]
gi|167665463|gb|EDS09593.1| hypothetical protein ANACOL_03737 [Anaerotruncus colihominis DSM
17241]
Length = 269
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI- 71
Q +I +FDSG+GGL ++++R L+PE H IY D PYG+ ++K + DI
Sbjct: 3 QRAIGVFDSGLGGLTTVRELRRLLPEEHIIYFGDTGRVPYGSRGREIIRK---YAVQDIR 59
Query: 72 -LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ + + AC T ++I E+ + + F G V PA + A A + +G I ++ T
Sbjct: 60 FLRRFDVKIIIAACGTVSSVITPEIVES-AGVPFSGVVLPAAQAACAASTNGRIGVIGTA 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF----I 185
ATLR I H + + VE G ++EI ++ + I
Sbjct: 119 ATLRSGAYGRAIRGIRPDAHTFGNACPLFVPLVEN---GFIQPDNEITIKVAQTYLQPMI 175
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
E E D ++L CTHYPLI V +L V +D+ +AR A+ LL R
Sbjct: 176 ENE---VDTLILGCTHYPLIRPVIDRLLRSRVTLIDSGAQVARWAQTLLTR 223
>gi|326573641|gb|EGE23600.1| glutamate racemase [Moraxella catarrhalis CO72]
Length = 285
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 35/236 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D
Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72
Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A
Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129
Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185
TL+ + +IH + +H +L VE G+ I D + K+ + +
Sbjct: 130 TLQGQLLAQVIHKVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234
++G D++VL CTHYP FRQ L W + LD+ +IA+R R LL
Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVRSLL 234
>gi|255524010|ref|ZP_05390972.1| glutamate racemase [Clostridium carboxidivorans P7]
gi|255512297|gb|EET88575.1| glutamate racemase [Clostridium carboxidivorans P7]
Length = 257
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 10/211 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWEDHALKKRLMFLFSDILD 73
I FDSG+GG+ VL++ L+P F+Y D PYG E+ + RL F + L
Sbjct: 6 IGFFDSGVGGISVLKEAVKLLPGEDFVYFGDSNNAPYGIKTVEEAS---RLTFEAVEFLI 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA + +LR + S M +G PA+K A + G I +++TP TL
Sbjct: 63 SKNIKAVVIACNTATSAAIIDLRKKYSSVMPVIGIEPALKPAVELKRKGQIVVMATPMTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL++ Y +Q ++ + L +E+ + E ++ +IE +++EG
Sbjct: 123 AERKFNNLMNRYKNQAQMYPMPCPGLVELIEQGMVEGEEVEKYLRDKIEP--LKEEG--I 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
IVL CTHYP I +L V +D S
Sbjct: 179 AAIVLGCTHYPFIKKTLSKLLNNEVPIIDGS 209
>gi|320530742|ref|ZP_08031786.1| glutamate racemase [Selenomonas artemidis F0399]
gi|320137029|gb|EFW28967.1| glutamate racemase [Selenomonas artemidis F0399]
Length = 262
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 9/219 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL R +P+ F++ AD PYG ++ + F ++++
Sbjct: 3 IALFDSGLGGLTVLGHARRALPDEEFLFFADRDHVPYGTKTVDEVRGFVRDAFRFLVEEE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA ++ DE+R + + +G PA+K+A ++ + + TP T+R
Sbjct: 63 RAEAVVIACNTATSVSADEMRRRY-DIPIIGMEPAVKKALDADRTRRVLVTGTPITVRGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +Y + HLV + L R+ E+A + +++ + + + I
Sbjct: 122 KLHRLIDTYDAN---HLVDLLPL-PRLVEFAENQEFVSPHVEEYLRTALAPFDFAQYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDS----IARRA 230
VL CTH+ R L P + + D +D +ARRA
Sbjct: 178 VLGCTHFNFFKDTMRSLMPETMTFADGNDGTVEELARRA 216
>gi|326563047|gb|EGE13321.1| glutamate racemase [Moraxella catarrhalis 103P14B1]
gi|326577286|gb|EGE27174.1| glutamate racemase [Moraxella catarrhalis 101P30B1]
Length = 285
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 35/236 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D
Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72
Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A
Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129
Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185
TL+ + +IH + +H +L VE G+ I D + K+ + +
Sbjct: 130 TLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234
++G D++VL CTHYP FRQ L W + LD+ +IA+R R LL
Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVRSLL 234
>gi|168185800|ref|ZP_02620435.1| glutamate racemase [Clostridium botulinum C str. Eklund]
gi|169295922|gb|EDS78055.1| glutamate racemase [Clostridium botulinum C str. Eklund]
Length = 259
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSG+GGL VL++ ++P FIY D PYG +KK L F + L ++
Sbjct: 11 FDSGVGGLSVLREAIKILPNEDFIYFGDSKNAPYGTKTVDEVKK-LTFNAVEFLLEHNVK 69
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
VIACNTA + ++LR+++ + +G PA+K A + G I I++TP TL +
Sbjct: 70 AIVIACNTATSAAIEDLRNSYKDIPIIGIEPALKPAVELHKKGKIVIMATPMTLAEKKFN 129
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK----EGKRTDV 194
L+ Y + + S+ VE GI +K EI + +EK + K
Sbjct: 130 KLMEKYKGKSEM---VSLPCPGLVEYVEKGI-VKGQEINR----FLLEKLSVIDKKEISS 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
+VL CTHYP I ++ V +D S
Sbjct: 182 VVLGCTHYPFIKEELSKILGEDVVIIDGS 210
>gi|317486144|ref|ZP_07944988.1| Asp/Glu/Hydantoin racemase [Bilophila wadsworthia 3_1_6]
gi|316922593|gb|EFV43835.1| Asp/Glu/Hydantoin racemase [Bilophila wadsworthia 3_1_6]
Length = 296
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 4/216 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL MR LMP ++++ D PYG + + + + ++
Sbjct: 10 QLPIGLFDSGVGGLTVLDAMRRLMPGEDYLFLGDTARVPYGAKSQKTIVRYSLQAAAKLI 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ +L VIACNTA LR T+P M +G + P + A + SG I++++T +T
Sbjct: 70 GQRIKLL-VIACNTATAAALPALRETWPDMPIIGVIEPGSRAACEASPSGDIAVIATEST 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + I + + ++ + EE I E + + +E F ++
Sbjct: 129 IRSGAYAEAILRRRPEAQVRSLACPLFVPLAEEGWFDGPIAEGVVSRYLEPLF--EKSPA 186
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTHYP++ R++ V +D++ + A
Sbjct: 187 PDCLVLGCTHYPMLAAAIRKVVGPEVHIVDSAATTA 222
>gi|187777456|ref|ZP_02993929.1| hypothetical protein CLOSPO_01023 [Clostridium sporogenes ATCC
15579]
gi|187774384|gb|EDU38186.1| hypothetical protein CLOSPO_01023 [Clostridium sporogenes ATCC
15579]
Length = 260
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 6/216 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL++ L+P+ F+Y D PYG + + K L F +D L
Sbjct: 11 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEV-KALTFNATDFLMNK 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 70 GIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL+ Y I + L +E+ GI + D I ++ F + + ++ I
Sbjct: 129 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDVIYNYLKDKFSKYDNEKISSI 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
VL CTHYP + ++++ +D S ++ +
Sbjct: 185 VLGCTHYPFVEETLKEVTHNKACIIDGSLGTSKELK 220
>gi|150003444|ref|YP_001298188.1| glutamate racemase [Bacteroides vulgatus ATCC 8482]
gi|254881258|ref|ZP_05253968.1| glutamate racemase [Bacteroides sp. 4_3_47FAA]
gi|294777674|ref|ZP_06743125.1| glutamate racemase [Bacteroides vulgatus PC510]
gi|319640260|ref|ZP_07994985.1| glutamate racemase [Bacteroides sp. 3_1_40A]
gi|149931868|gb|ABR38566.1| glutamate racemase [Bacteroides vulgatus ATCC 8482]
gi|254834051|gb|EET14360.1| glutamate racemase [Bacteroides sp. 4_3_47FAA]
gi|294448742|gb|EFG17291.1| glutamate racemase [Bacteroides vulgatus PC510]
gi|317388035|gb|EFV68889.1| glutamate racemase [Bacteroides sp. 3_1_40A]
Length = 281
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 45/280 (16%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + + S + +
Sbjct: 12 IGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQAVSKLFELG 71
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
P L ++ACNTA T+ + L + LG + P + T+S + IL+T
Sbjct: 72 CP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRSRHVGILATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186
T++ SY+ + IH +S I+ V AC + ++ +E + E F++
Sbjct: 131 GTIKS-------ESYLLE--IHKLSPDIV---VTGEACPMWVSLVENNEYQSEGADYFVK 178
Query: 187 KEGKR-------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--- 236
+ R D I+L CTHYPL++ RQ +P P+ + + +AR R L R
Sbjct: 179 QHINRLLDKDPMIDTIILGCTHYPLLLDKIRQFTPEPIRIISQGEYVARSLRDYLNRHPE 238
Query: 237 -------------INTHQTRVFDDHALFLSGKPDIAMRRL 263
+ T F++ A G+ DI ++ +
Sbjct: 239 MDARCDKGGNCRFLTTESENKFEESASIFLGRQDIKVKSI 278
>gi|163846057|ref|YP_001634101.1| glutamate racemase [Chloroflexus aurantiacus J-10-fl]
gi|222523790|ref|YP_002568260.1| glutamate racemase [Chloroflexus sp. Y-400-fl]
gi|163667346|gb|ABY33712.1| glutamate racemase [Chloroflexus aurantiacus J-10-fl]
gi|222447669|gb|ACM51935.1| glutamate racemase [Chloroflexus sp. Y-400-fl]
Length = 262
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 113/223 (50%), Gaps = 8/223 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V++ + +P+ +Y+AD PYG ++ R + ++D+
Sbjct: 2 IGIFDSGLGGLSVMRAIHERLPDTDLLYLADSAYCPYGPRPLSEIRDRALACGRWLVDQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA + LR P + +G P +K A A T++G +++L+T TL
Sbjct: 62 ARIV-VVACNTATAAAIELLRRELP-VPVVGMEPGVKPAVAATRNGKVAVLATSGTLASD 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L+ +Y + ++ ++ L ++VE +++ D+ + IE DVI
Sbjct: 120 RFRSLVQAYAAGVEVYPLACPDLVAQVEAG----ELQSDQTRNLIEQHLATV--PEVDVI 173
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
VL CTH+P + + + V +D ++A + + +IN
Sbjct: 174 VLGCTHFPPLKPLIATCAGSHVTVIDTGPAVAAQTERIARQIN 216
>gi|291523945|emb|CBK89532.1| glutamate racemase [Eubacterium rectale DSM 17629]
Length = 258
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 4/217 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++
Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLEQVRALTCEHAKELILN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R
Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y I + L + VE + D++++ +E D
Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+VL CTHYP + + +++ V D + AR +
Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMK 214
>gi|238789626|ref|ZP_04633410.1| Glutamate racemase [Yersinia frederiksenii ATCC 33641]
gi|238722379|gb|EEQ14035.1| Glutamate racemase [Yersinia frederiksenii ATCC 33641]
Length = 212
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 4/209 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++
Sbjct: 1 MLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVV 59
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T+ +YT +LI + + C I L+ S L E G + + +KK +
Sbjct: 60 GLLATRGTVHASYTLDLIERFATDCKIELLGSSELVELAESKLHGGVVPVEALKKILHPW 119
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ +
Sbjct: 120 LMMREPP--DTIVLGCTHFPLLAEELAQVLPEGTRMVDSGAAIARRTAWLISSQENIISS 177
Query: 244 VFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
++ A ++ D A+ ++QG+G +
Sbjct: 178 TDENIAYCMALNADTDALLPVLQGYGFPT 206
>gi|332704699|ref|ZP_08424787.1| Glutamate racemase [Desulfovibrio africanus str. Walvis Bay]
gi|332554848|gb|EGJ51892.1| Glutamate racemase [Desulfovibrio africanus str. Walvis Bay]
Length = 282
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 2/222 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R L+P F Y+ D PYG ++ R S L
Sbjct: 14 IGVFDSGVGGLTVLRALRELLPGEDFRYLGDTARLPYGTKSRESVV-RYALQSSRHLVAQ 72
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA +L +P + +G V P + A +G I++++T +T++
Sbjct: 73 GVKLLVVACNTATAAALPDLAEAYPGIPVVGVVRPGARAGCALNTNGRIAVMATESTVQG 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I I + + + EE + E +K+ ++ F E +
Sbjct: 133 GAYQAAIRELCPNMRIEAAACSLFVALAEEGWTEGPLVEGIVKRYLDPLFARFEDQPPTS 192
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+VL CTH+P++ +++ V +D++ + A+ R LL R
Sbjct: 193 LVLGCTHFPMLAGAIAKVAGEGVTVIDSAVTTAQEVRELLVR 234
>gi|152980748|ref|YP_001352569.1| glutamate racemase [Janthinobacterium sp. Marseille]
gi|151280825|gb|ABR89235.1| glutamate racemase [Janthinobacterium sp. Marseille]
Length = 284
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 7/238 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M YP I IFDSG+G L VL+ ++ +P H + AD PYG D A+
Sbjct: 1 MSFSAYPDPVAADAPIGIFDSGVGALSVLRHIQARLPSEHLLCFADSGYAPYGGKSDAAI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + + K + V+ACNTA + LR +P + +G P +K AA +++S
Sbjct: 61 IERTLDIAAFLTTKNIKAI-VVACNTATAAAIEALRQHYPQLIIVGVEPGLKPAAVFSKS 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G +L+T +TL + L + I ++ + VE+ G ++ E +
Sbjct: 120 GKAGVLATASTLASSRFIALRDQISTSTGITFLTQACV-GLVEQIEKG-ELDSTETIAML 177
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLI---VHVFRQL-SPWPVDWLDNSDSIARRARCLL 234
E D + L CTHYP + + V Q S PV +D ++++R+ LL
Sbjct: 178 ERYVTPLLRGGADTLALGCTHYPFVQPAIEVIAQRESAVPVTIIDTGEAVSRQLERLL 235
>gi|251773011|gb|EES53567.1| glutamate racemase [Leptospirillum ferrodiazotrophum]
Length = 315
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+ L PE F+Y+ D FPYG+ A+ R + +L +Y+P
Sbjct: 50 LFDSGMGGLSVLRHFLELFPEEDFLYLGDMARFPYGSKSREAI-CRFAVEDAGLLSRYRP 108
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRRTY 136
V V AC T + D L S FP + +G V A +AA A T++G + +L T T+R
Sbjct: 109 VTLVAACFTVSSQALDILVSRFPEIRVVGMVEAGARAALAMTRTGHVGVLGTEGTIRSGA 168
Query: 137 TSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ Q ++ +S + A VEE +I E + +E +E D I
Sbjct: 169 YPAIFQRLGGQETNVFGISCPLFAPMVEEGWIDGEIPE-RVAREYLAPIVEGRTPDVDTI 227
Query: 196 VLACTHY 202
+L CTHY
Sbjct: 228 ILGCTHY 234
>gi|238923092|ref|YP_002936605.1| glutamate racemase [Eubacterium rectale ATCC 33656]
gi|238874764|gb|ACR74471.1| glutamate racemase [Eubacterium rectale ATCC 33656]
Length = 258
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 4/217 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++
Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLERVRALTCEHAKELILN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R
Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y I + L + VE + D++++ +E D
Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+VL CTHYP + + +++ V D + AR +
Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMK 214
>gi|325294218|ref|YP_004280732.1| Glutamate racemase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064666|gb|ADY72673.1| Glutamate racemase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 263
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 9/225 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL VL+ +R +P IY D PYG + R + +L
Sbjct: 3 ERPIGIFDSGVGGLTVLRALRKKLPSEDLIYFGDTARVPYGTKSPKTI-IRYSIENTKLL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + ++ACNT+ + + L+S F + LG + P + A + T+SG + ++ T AT
Sbjct: 62 KRFNVKMVIVACNTSSSYALEILKSEFSDVPILGVINPGARLAVSATKSGKVGVIGTEAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEGK 190
++ IH C + + +EE D + E+ ++ GK
Sbjct: 122 IKSGAYRKAIHFINPSCLVFEKVCPLFVPLIEEGWL-----NDPVTLEVARRYVLPLLGK 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
D +VL CTHYPLI + ++ V +D++ +IA LP
Sbjct: 177 GIDTLVLGCTHYPLIKDILLKICKN-VTLIDSAQAIADEVAKALP 220
>gi|261854703|ref|YP_003261986.1| glutamate racemase [Halothiobacillus neapolitanus c2]
gi|261835172|gb|ACX94939.1| glutamate racemase [Halothiobacillus neapolitanus c2]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ K I IFDSG+GGL V Q +R +P IY+AD PYG+ + +R + +
Sbjct: 5 DTKPTAPIGIFDSGVGGLSVYQAVRHALPAEDIIYIADSGFAPYGDRSSDFITERAVAM- 63
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+D L V+ACNTA + +LR F S+ + PAIK A ++QSG I +L+T
Sbjct: 64 TDFLIAAGAKAVVVACNTATVIAVTQLRRQF-SIPIIALEPAIKPAIEHSQSGTIGVLAT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMIL-------ASRVEEYACGIKIKEDEIKKEIE 181
R+T S + C H V++ +L +VE D I++ +E
Sbjct: 123 ----RKTIESPAVERL---CRTHGVNTRVLLQPCPGFVEQVERGEMDHPDTTDLIRRYVE 175
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D +VL CTHY + R + V LD+S ++AR+
Sbjct: 176 PLL----AAGADTLVLGCTHYVYLAQQIRTIVGPDVSILDSSAAVARQ 219
>gi|291528592|emb|CBK94178.1| glutamate racemase [Eubacterium rectale M104/1]
Length = 258
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 4/217 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++
Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLERVRALTCEHAKELILN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R
Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y I + L + VE + D++++ +E D
Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+VL CTHYP + + +++ V D + AR +
Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMK 214
>gi|150014924|ref|YP_001307178.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
gi|149901389|gb|ABR32222.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
Length = 284
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSG+GGL V+++ +MP +FIY D PYG K+++ + +D + +
Sbjct: 36 FDSGVGGLSVMREAISIMPNENFIYFGDSKNAPYG-------IKKVIEVRDLTIDAVEFL 88
Query: 79 LS------VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
LS VIACNTA + +E+RS + ++ +G PA+K A + G I I++TP TL
Sbjct: 89 LSKNVKAVVIACNTATSAAIEEIRSKYKQISIIGIEPALKPAVKLNRKGQIIIMATPMTL 148
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEKEG 189
R L+ Y ++ I S+ A VE GI ED +K++ +G +++ +
Sbjct: 149 REKKFKLLMDKYKNEADII---SLPCAGLVEFIEQGIVEGEDLEYYLKEKFKG-YLDND- 203
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
IVL CTHYP I + + +D A+ +
Sbjct: 204 --ISSIVLGCTHYPFIKKALSNVIGKEIPLIDGGFGTAQELK 243
>gi|317151766|ref|YP_004119814.1| glutamate racemase [Desulfovibrio aespoeensis Aspo-2]
gi|316942017|gb|ADU61068.1| glutamate racemase [Desulfovibrio aespoeensis Aspo-2]
Length = 279
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 6/235 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E + I +FDSG+GGL VL+ +R MP +Y+ D PYG + + +
Sbjct: 2 ENAAKLPIGMFDSGVGGLTVLRALRERMPCEDVVYLGDTARLPYGTKSPQTVSRYAVQCA 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
++++ + +L V+ACNTA + LR +P + +G V P + A T++ I +++
Sbjct: 62 AELVRREIKLL-VVACNTASAVAIGPLREAYPGIPVIGVVEPGAQAACRATRNQAIGVIA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ IH+ + I + + EE + E + + F
Sbjct: 121 TEATIAGGAYHRAIHAIAPEARIVGHPCQLFVALAEEGWIDGPVAEGVAARYLHPVFRPA 180
Query: 188 EGKRT----DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
G + D +VL CTH+PL+ R + V +D++ + A L R+N
Sbjct: 181 SGTESPVIPDTLVLGCTHFPLLAPAIRSVLDPSVVIVDSAATTAETVYAELARLN 235
>gi|187934900|ref|YP_001884328.1| glutamate racemase [Clostridium botulinum B str. Eklund 17B]
gi|229486235|sp|B2THT3|MURI_CLOBB RecName: Full=Glutamate racemase
gi|187723053|gb|ACD24274.1| glutamate racemase [Clostridium botulinum B str. Eklund 17B]
Length = 258
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 5/233 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I FDSG+GGL V+++ LMP ++IY D PYG ++
Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAIRLMPNENYIYFGDSKNAPYGVKTVEEVRTLTFNAVES 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L+K + V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP
Sbjct: 63 LLEKNVKAI-VVACNTATSAAIDLVRSKYENIPIIGIEPALKLATKYNRKGNIIIMATPM 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ +L+ Y I S+ A VE GI + +E+++ ++ F +
Sbjct: 122 TLKENKFKSLMEKYGENYDI---VSLPCAKLVEFIEHGI-LSGEELEEYLKEKFKPYKNN 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
V+VL CTHYP I ++ + +D ++ R L N T
Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTE 230
>gi|189345889|ref|YP_001942418.1| glutamate racemase [Chlorobium limicola DSM 245]
gi|189340036|gb|ACD89439.1| glutamate racemase [Chlorobium limicola DSM 245]
Length = 274
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 12/226 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD-- 70
++ I IFDSG+GGL V++ M+ ++P IY D PYG+ ++K + D
Sbjct: 11 ESPIGIFDSGVGGLTVVRAMQAILPAERLIYFGDTARVPYGSKSQVTIRK---YAHDDTA 67
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTP 129
IL +YQP + ++ACNT L D + T ++ +G + A Q A + ++ I ++ T
Sbjct: 68 ILMRYQPKMIIVACNTVSALALDVVEKTCGNIPVIGVLEAGAQLAVSRSEHKRIGVIGTQ 127
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
AT+ + I+ S+ +H + + EE + + I ++ +
Sbjct: 128 ATVCSNAYACAINMLDSEVTVHSKACPLFVPLAEE-----GFTDHPATRLIAAEYLRAFD 182
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
G D +VL CTHYP++ + Q + +D+++++A RA+ LL
Sbjct: 183 GHDIDTLVLGCTHYPILRSMIEQTIGPDIRIIDSAEAVACRAKELL 228
>gi|326578047|gb|EGE27911.1| glutamate racemase [Moraxella catarrhalis O35E]
Length = 285
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D
Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72
Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A
Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129
Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185
TL+ + +IH + +H +L VE G+ I D + K+ + +
Sbjct: 130 TLQGQLLAQVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234
++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL
Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234
>gi|226951018|ref|YP_002806109.1| glutamate racemase [Clostridium botulinum A2 str. Kyoto]
gi|254766112|sp|C1FNG8|MURI_CLOBJ RecName: Full=Glutamate racemase
gi|226841163|gb|ACO83829.1| glutamate racemase [Clostridium botulinum A2 str. Kyoto]
Length = 257
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K +++K
Sbjct: 8 IGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALTSNATDFLMNKG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 68 IKAL-VVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEK 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL+ Y I + L +E+ GI + D I ++ F + + ++ I
Sbjct: 126 KFANLMDLYKETEDIEPLPCPGLPELIEQ---GI-VSGDIIYNYLKDKFSKYDNEKISSI 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
VL CTHYP I ++++ +D S +R + L N
Sbjct: 182 VLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSN 224
>gi|188587547|ref|YP_001919512.1| glutamate racemase [Clostridium botulinum E3 str. Alaska E43]
gi|229486234|sp|B2UX89|MURI_CLOBA RecName: Full=Glutamate racemase
gi|188497828|gb|ACD50964.1| glutamate racemase [Clostridium botulinum E3 str. Alaska E43]
Length = 258
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 5/233 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I FDSG+GGL V+++ LMP ++IY D PYG ++
Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAIRLMPNENYIYFGDSKNAPYGIKTVEEVRTLTFNAVES 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L+K + V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP
Sbjct: 63 LLEKNVKAI-VVACNTATSAAIDLVRSKYKNIPIIGIEPALKLATKYNRKGNIIIMATPM 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ +L+ Y I S+ A VE GI + +E+++ ++ F +
Sbjct: 122 TLKEKKFKSLMEKYGENYDI---VSLPCAKLVEFIEHGI-LSGEELEEYLKEKFKSYKNN 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
V+VL CTHYP I ++ + +D ++ R L N T
Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTE 230
>gi|8102060|gb|AAF72725.1|AF264024_1 glutamate racemase [Psychrobacter sp. St1]
Length = 296
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 14/261 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
KK I +FDSG+GGL V + +P ++Y AD + PYGN D A + L
Sbjct: 9 NKKRNAPIGLFDSGVGGLSVYLHLAQQLPAERYVYYADTLNVPYGN-RDSADIEALTLTA 67
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D L + L VIACN+A + R +P + +G VPA+K A + +++G + +L+T
Sbjct: 68 VDWLYEQGCKLIVIACNSASAYALETARRRYPQLPIVGLVPALKPAISASKTGRVVVLAT 127
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED-EIKKEIEGCFIEK 187
ATL T + +I + ++ + +V+ V G+ ++D ++ +
Sbjct: 128 KATLNGTLLNEVIDHF-AKPNNTVVTKYFDPQLVPWVEAGMPEQDDTALRLRQQLTLFAH 186
Query: 188 EGKRTDVIVLACTHYP-----LIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTH 240
+G D +VL CTHYP L+ + +Q V +D+ +IA R + LL +++
Sbjct: 187 DG--VDQLVLGCTHYPFFKTFLLNEIAQQQLAMQV--VDSGQAIAERVKQLLAANQLSAL 242
Query: 241 QTRVFDDHALFLSGKPDIAMR 261
DDH L + K + +
Sbjct: 243 IDNTPDDHCLETTDKTKVVTQ 263
>gi|146299447|ref|YP_001194038.1| glutamate racemase [Flavobacterium johnsoniae UW101]
gi|146153865|gb|ABQ04719.1| glutamate racemase [Flavobacterium johnsoniae UW101]
Length = 259
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 15/226 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
N I +FDSGIGG + + L+P IY+AD PYG + KK + FL
Sbjct: 4 NNPIGVFDSGIGGTSIWSAIHDLLPNEKTIYLADSKNAPYGQKTKEEIVALSKKNVEFLL 63
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L V+ACNTA T ELR+ + + F+G PAIK AA +++ +I IL+T
Sbjct: 64 ENNCK-----LIVVACNTATTNAIRELRNDY-DIPFIGIEPAIKPAATNSRTQVIGILAT 117
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL S L + + + V+ G + E+ + +E
Sbjct: 118 KGTLN----SELFNKTAEMFQHTTIIEQVGYGLVQLIEDG-NLNSPEMTQLLESYLQPMI 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL C+HYP ++ +++ P + +D+ +++AR+ + +L
Sbjct: 173 DANIDYLVLGCSHYPYLIPQIKKILPDHIQIIDSGEAVARQTQNVL 218
>gi|323525504|ref|YP_004227657.1| glutamate racemase [Burkholderia sp. CCGE1001]
gi|323382506|gb|ADX54597.1| glutamate racemase [Burkholderia sp. CCGE1001]
Length = 295
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 6/212 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL+ +R P+ +YVAD + PYG +D + R + + ++ +
Sbjct: 25 IFDSGLGGLSVLRAVRAQSPDEALLYVADSLYAPYGERDDDFIADRTLAIGEWLVKQGAK 84
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA +R P + +G P +K AA ++++ + +L+T TLR
Sbjct: 85 AL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALHSRTRVAGVLATQVTLRSARF 142
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ Y + C L VE G E++ + D +VL
Sbjct: 143 QALLARYAADCRFICQPGHGLVQAVERCDVG----SAELRALLASYLQPMLEAGADTLVL 198
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
CTHYP + R + + +D S +IAR+
Sbjct: 199 GCTHYPFLDAAIRDIVGDRMALVDTSVAIARQ 230
>gi|262037470|ref|ZP_06010930.1| glutamate racemase [Leptotrichia goodfellowii F0264]
gi|261748505|gb|EEY35884.1| glutamate racemase [Leptotrichia goodfellowii F0264]
Length = 261
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 17/229 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70
SI IFDSG+GGL VL+++R ++P Y+ D PYG + K+ FL
Sbjct: 2 SIGIFDSGVGGLTVLKEIRKVLPNEKIYYLGDTARVPYGEKTKELIVRYSKQITEFLLEQ 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129
+D V+ACNTA +L +EL+ TF + +G V A +K A T++ I ++ T
Sbjct: 62 NVDAI-----VVACNTATSLALEELKETF-RVPIIGVVDAGVKTALYTTKNNKIGVIGTK 115
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ I + S ++ S + +EE I + EI + ++++
Sbjct: 116 ATINSRKYETEIKNKNSAIEVYSKSCPLFVPVIEE-----GITKGEIVDLVVKMYLDEFK 170
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
++ D ++L CTHYPL+ + L P ++ +D + A + +L N
Sbjct: 171 EKIDSLILGCTHYPLLKETIKNLYP-NIEIVDPAKETAEDLKKILTDNN 218
>gi|302876669|ref|YP_003845302.1| glutamate racemase [Clostridium cellulovorans 743B]
gi|307687344|ref|ZP_07629790.1| glutamate racemase [Clostridium cellulovorans 743B]
gi|302579526|gb|ADL53538.1| glutamate racemase [Clostridium cellulovorans 743B]
Length = 259
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 6/218 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++ +P+ + I+ D PYG D +KK L F + L K Q
Sbjct: 11 MDSGVGGLSVMKEAIKALPQENLIHFGDSKNAPYGIKTDEEIKK-LTFSAVEFLIKKQCK 69
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
VIACNTA ++ ++LR + + +G PA+K A + G I +++TP TL++ +
Sbjct: 70 AIVIACNTATSVAINDLREIYKEVPIIGIEPAVKPAVELNEDGKIIVMATPVTLKKEKFN 129
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+L+ Y S I + L +E G+ ++ +E+ + F + +VL
Sbjct: 130 HLLEMYGSDREIIFLPCPELVELIER---GV-LEGEELDNYLLSKFKPYLNDKISAVVLG 185
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
CTHYP +++ +D S ++ + +L R
Sbjct: 186 CTHYPFAKKAIKKIV-GDAKIIDGSYGTVKQLKNILMR 222
>gi|300857321|ref|YP_003782305.1| glutamate racemase [Clostridium ljungdahlii DSM 13528]
gi|300437436|gb|ADK17203.1| glutamate racemase [Clostridium ljungdahlii DSM 13528]
Length = 261
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL++ ++ F+Y D PYG + KRL F ++L
Sbjct: 8 IGFFDSGIGGISVLKEAVKILSNEDFVYFGDSKMAPYGVKTAEEV-KRLTFNAVELLLTK 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + +LR + SM +G PA+K A + + G I I++T TL
Sbjct: 67 NIKALVVACNTATSAAIIDLRKKYSKSMPIIGIEPALKPAVEFNRKGKIVIMATTMTLSE 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD- 193
SNL+ Y S+ I + L +E+ E E E+EG EK D
Sbjct: 127 RKFSNLMKKYESRSSIQPLPCPGLVELIEQGKT-----EGE---EVEGYLKEKLNSLKDE 178
Query: 194 ---VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+VL CTHYP + R++ + +D S + +
Sbjct: 179 GIAAVVLGCTHYPFVKKSIRKILNEDIPIIDGSKGTVEQLK 219
>gi|326569565|gb|EGE19619.1| glutamate racemase [Moraxella catarrhalis BC8]
Length = 285
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D
Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72
Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A
Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129
Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185
TL+ + +IH + +H +L VE G+ I D + K+ + +
Sbjct: 130 TLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234
++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL
Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234
>gi|313896052|ref|ZP_07829606.1| glutamate racemase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975477|gb|EFR40938.1| glutamate racemase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 262
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 9/219 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL R +P+ F++ AD PYG ++ + F ++++
Sbjct: 3 IALFDSGLGGLTVLGHARRALPDEEFLFFADRDHVPYGTKTVDEVRGFVRDAFRFLVEEE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA ++ DE+R + + +G PA+K+A ++ + + TP T+R
Sbjct: 63 RVEAIVIACNTATSVSADEMRRCY-DIPIIGMEPAVKKALDADRTRRVLVTGTPITVRGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +Y + HLV + L R+ E+A + +++ + + + I
Sbjct: 122 KLHRLIDTYDAN---HLVDLLPL-PRLVEFAENQEFVSPHVEEYLRTALAPFDLAQYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDS----IARRA 230
VL CTH+ R L P + + D +D +ARRA
Sbjct: 178 VLGCTHFNFFKDTMRSLMPETMTFADGNDGTVEELARRA 216
>gi|326560827|gb|EGE11193.1| glutamate racemase [Moraxella catarrhalis 46P47B1]
gi|326561925|gb|EGE12260.1| glutamate racemase [Moraxella catarrhalis 7169]
gi|326567030|gb|EGE17153.1| glutamate racemase [Moraxella catarrhalis 12P80B1]
Length = 285
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D
Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72
Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A
Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129
Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185
TL+ + +IH + +H +L VE G+ I D + K+ + +
Sbjct: 130 TLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234
++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL
Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234
>gi|326336585|ref|ZP_08202754.1| glutamate racemase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691250|gb|EGD33220.1| glutamate racemase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 259
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 114/226 (50%), Gaps = 7/226 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FDSG+GG + + + L+P +++AD + PYG + L ++
Sbjct: 1 MNTPIGLFDSGVGGTTIWRTLVRLLPYEDTLFLADSIHAPYGEKTSEEIIA-LCEKNTEY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ L ++ACNTA T LR+ + + F+G PAIK A Y+Q+ I +L+T +T
Sbjct: 60 LLEHNSKLIIVACNTATTNAISHLRAKY-KVPFIGIEPAIKPAGLYSQTKTIGVLATQST 118
Query: 132 LRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
LR + + + H+ + L +EE +I E+ + +E +
Sbjct: 119 LRSAFFARTCQQLFDKGIHVIKQEGVGLVPLIEEG----RINTPEMIELLEKYLQPMIEQ 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
D +VL CTHYP + + ++ P V +D+++++A++ + +L +
Sbjct: 175 NMDYLVLGCTHYPYLTSLISEILPEKVRIMDSAEAVAKQTQRILSQ 220
>gi|254302994|ref|ZP_04970352.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148323186|gb|EDK88436.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 264
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D K
Sbjct: 8 IGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFVKN 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T
Sbjct: 68 NCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKTTKNKNIAVISTKFTAES 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
N S+ ++ ++ + A +E G ++ +KE+ ++ + K TD
Sbjct: 127 HGYKNKAKMLDSELNVKEIACIEFAQMIE---SGWDTFDN--RKELLNKYLSEIPKNTDT 181
Query: 195 IVLACTHYPLI 205
+VL CTHYPLI
Sbjct: 182 LVLGCTHYPLI 192
>gi|326570331|gb|EGE20375.1| glutamate racemase [Moraxella catarrhalis BC1]
Length = 285
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D
Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72
Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A
Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129
Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185
TL+ + +IH + +H +L VE G+ I D + K+ + +
Sbjct: 130 TLQGQLLAQVIHKVATSKGITVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234
++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL
Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234
>gi|319760706|ref|YP_004124644.1| glutamate racemase [Candidatus Blochmannia vafer str. BVAF]
gi|318039420|gb|ADV33970.1| glutamate racemase [Candidatus Blochmannia vafer str. BVAF]
Length = 281
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 11/225 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+++LI DSG+GGL + +R ++P +++Y+ D+ FPYGN + + +R++ + I
Sbjct: 12 STVLILDSGVGGLFFYETVRRIVPFVNYLYLIDNKCFPYGNCSEKFIIQRVILIIERICR 71
Query: 74 KYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L VIACNT A ++++ R FP +G VP I+ A T++G++ IL T
Sbjct: 72 FLKFDLVVIACNTISVVALSILQINFR--FP---IIGVVPEIQLACQCTKNGVVGILGTC 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ Y N I + + +I L+ + L E G + + E+ + K
Sbjct: 127 RTVNNKYIFNSIKRFAYKKNIVLLGTSRLVELAESKVYGNLVSKLELIDILNPWLNLK-- 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
K D IVL CTH+ + + + P +D+S+ + + LL
Sbjct: 185 KIPDTIVLGCTHFSWLKSELQSVLPVDSCLIDSSNRLINHIKYLL 229
>gi|34762406|ref|ZP_00143407.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|237742084|ref|ZP_04572565.1| glutamate racemase [Fusobacterium sp. 4_1_13]
gi|256845420|ref|ZP_05550878.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
gi|294785284|ref|ZP_06750572.1| glutamate racemase [Fusobacterium sp. 3_1_27]
gi|27887931|gb|EAA24998.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|229429732|gb|EEO39944.1| glutamate racemase [Fusobacterium sp. 4_1_13]
gi|256718979|gb|EEU32534.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
gi|294486998|gb|EFG34360.1| glutamate racemase [Fusobacterium sp. 3_1_27]
Length = 264
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D K
Sbjct: 8 IGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFVKN 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T
Sbjct: 68 NCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKNTKNKNIAVISTKFTADS 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
N S+ ++ ++ + A +E G ++ +KE+ ++ + K TD
Sbjct: 127 HGYKNKAKMLDSELNVKEIACIEFAQMIE---SGWDTFDN--RKELLNKYLSEIPKNTDT 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+VL CTHYPLI + + +D + I RA L +N
Sbjct: 182 LVLGCTHYPLIRKDIEK--NIKIKVVDPAVEIVERATQTLSSLN 223
>gi|310659702|ref|YP_003937423.1| glutamate racemase [Clostridium sticklandii DSM 519]
gi|308826480|emb|CBH22518.1| glutamate racemase [Clostridium sticklandii]
Length = 274
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 12/236 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MK+ N K+ + I FDSGIGGL VL K +MP +IY AD PYG + A
Sbjct: 1 MKMSN----KEERYKIGFFDSGIGGLTVLHKALEMMPLEDYIYYADTENQPYG-IKTKAE 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-- 118
+ L+F D + V+ACNTA ++ ++LR + + +G PA+K A YT
Sbjct: 56 VRELVFKAMDFIVSKNVKAIVVACNTATSVAIEDLRKKY-DIPIIGMEPAVKPAVRYTDI 114
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + + +T TL+ NLI + S+ + L+ L ++A + E I K
Sbjct: 115 ENKKVLVTATKLTLKEEKLHNLISALDSESIVDLLELQELV----QFAERLDFDETRITK 170
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+E F E + K +VL CTH+ + ++L + +D ++ R + +L
Sbjct: 171 YLENQFKEIDLKDYQTLVLGCTHFIFFKDMIQKLVTKEISIIDGNEGTIRHLQNIL 226
>gi|257454377|ref|ZP_05619640.1| glutamate racemase [Enhydrobacter aerosaccus SK60]
gi|257448280|gb|EEV23260.1| glutamate racemase [Enhydrobacter aerosaccus SK60]
Length = 289
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 18/241 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL ++ +P +IY+AD + PYG+ + +++ L L
Sbjct: 9 IGVFDSGLGGLSVLTHLQRRLPFERYIYLADTLHVPYGSRSEAQIRE-LTLQAVAWLHSQ 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACN+A R +P + +G VPA+K A + + +++L+TPATL
Sbjct: 68 GCKLIVIACNSASAHGLQAARRQYPQVPIVGLVPALKPAVMQSATKQVAVLATPATLHGY 127
Query: 136 YTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +I Q +H S L VE G+ + +++ E + K+ D
Sbjct: 128 LLNEVIEQVAKPQQVTVHKYSFNSLVPWVE---LGMPSHHPAV-TDLDHLLSELQDKKVD 183
Query: 194 VIVLACTHYPL--------IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQT 242
+VL CTH+P I + + V +D+ D+IA+R LL + N +H+
Sbjct: 184 QLVLGCTHFPFFKAYLAQRIDELMTHQAMGQVALIDSGDAIAKRVHDLLEQANQLASHKE 243
Query: 243 R 243
R
Sbjct: 244 R 244
>gi|167590293|ref|ZP_02382681.1| glutamate racemase [Burkholderia ubonensis Bu]
Length = 277
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 116/259 (44%), Gaps = 11/259 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +F+SG+GGL V++ +R +P +Y+AD PYG D ++ R L +D L +
Sbjct: 12 IGVFNSGLGGLSVVEAIRQRLPGEALLYIADSRYAPYGEKSDAFIRARSQAL-TDWLVQN 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA T LR+ F ++ +G P IK A + S ++ +L+T ATLR
Sbjct: 71 SAKMLVIACNTATTHAIAHLRTQF-AIPIIGVEPGIKPAMQASASKVVGVLATAATLRSQ 129
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ C + L R+E+ + I+ +E + D +
Sbjct: 130 RLRALLAENDHACRFVCQAGHGLVERIEQGEAAGSV----IESLLEAYLTPMIDEGADTL 185
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL--- 252
VL THY L++ R++ ++ + +IARR L H + L L
Sbjct: 186 VLGSTHYALLMPSIRRIFGSRFRLIETATAIARRVDHQLAEYRLHNDANPANAPLQLCST 245
Query: 253 --SGKPDIAMRRLMQGFGL 269
S + + RL QG L
Sbjct: 246 ATSAEQRAPLARLAQGLAL 264
>gi|293610177|ref|ZP_06692478.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827409|gb|EFF85773.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 288
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 13/225 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L D L +
Sbjct: 23 IGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQ 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT R
Sbjct: 82 GCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRG 141
Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIK--KEIEGCFIEKEGK 190
+++ + + + ++S+ L VE G ++ E +K KE+ E +
Sbjct: 142 QLIKDVVEKFAVPAGVKVMTLTSLELVPCVE---AGQQMGEACLKALKEVLQPAAE---Q 195
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
D +VL CTHYP + L +D+ ++AR+ AR L+
Sbjct: 196 GADYLVLGCTHYPFLNQAIHHLFDNQFTLVDSGLAVARQTARILI 240
>gi|326572368|gb|EGE22361.1| glutamate racemase [Moraxella catarrhalis BC7]
Length = 285
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D
Sbjct: 17 IGIFDSGVGGLSVYRHLAELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72
Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L VIACN +A++L +R P +G VPA+K A +Q+ I++L+T A
Sbjct: 73 CRQGCKLIVIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129
Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185
TL+ + +IH + +H +L VE G+ I D + K+ + +
Sbjct: 130 TLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234
++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL
Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234
>gi|154174379|ref|YP_001408311.1| glutamate racemase [Campylobacter curvus 525.92]
gi|166231030|sp|A7GYL9|MURI_CAMC5 RecName: Full=Glutamate racemase
gi|112803185|gb|EAU00529.1| glutamate racemase [Campylobacter curvus 525.92]
Length = 266
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--------NWEDHALKKRLMFL 67
I IFDSG+GGL VL + +P F+Y AD PYG + HA+K FL
Sbjct: 3 IGIFDSGLGGLSVLNEALKKLPNEEFLYYADRKNVPYGLKSKDEILKFSSHAVK----FL 58
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS--- 124
+D+ + VIACNTA + +ELR+ F + +G PA+K+AA + G S
Sbjct: 59 ----IDQGANAI-VIACNTATSAAINELRAKF-DLPIIGMEPAVKKAADLNREGENSASL 112
Query: 125 ---ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++TP T++ LI S+ HLV + L R+ E+A DE+K+ +
Sbjct: 113 RTLVIATPLTVQGAKLKELIERVDSE---HLVDVLAL-PRLVEFAENENFACDEVKEYLR 168
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
F + + + +VL CTH+ R++ P V +D ++ + L R+N
Sbjct: 169 EEFAKFKLQNYCALVLGCTHFNYFKDSLREILPAGVSLIDGNEGTINKLISELSRLN 225
>gi|255321272|ref|ZP_05362438.1| glutamate racemase [Acinetobacter radioresistens SK82]
gi|255301826|gb|EET81077.1| glutamate racemase [Acinetobacter radioresistens SK82]
Length = 276
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 13/225 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL V Q++ +P +Y AD PYG D +++ L + L +
Sbjct: 10 IGIFDSGIGGLSVAQEIARHLPHEQILYYADTAHVPYGPRSDQNIRE-LTAQAIEWLYRQ 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+V+ACNTA D LR + S +G VPA+K A +++ ++++L+TPAT R
Sbjct: 69 GCKAAVVACNTASAFSLDYLRKHYGESFPIIGLVPALKPAVLQSKTKVVAVLATPATFRG 128
Query: 135 TYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKEDEIK--KEIEGCFIEKEGK 190
++I + + + ++ + L VE+ G+++ + + K+I +E+
Sbjct: 129 NLIKDVIERFAMPTGVKVLPITCLELVPLVEQ---GLQMSQQCLNTLKKILQPVVEQGA- 184
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
D +VL CTHYP + + + + +D+ ++AR+ AR L+
Sbjct: 185 --DHLVLGCTHYPFLKPAIQAIFGQQLTLVDSGQAVARQTARILI 227
>gi|121730805|ref|ZP_01682883.1| ATPase of the AAA+ class [Vibrio cholerae V52]
gi|121627620|gb|EAX60302.1| ATPase of the AAA+ class [Vibrio cholerae V52]
Length = 129
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 2/122 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIK-PASLIASKAIGLIATPATVKRQ 126
Query: 136 YT 137
YT
Sbjct: 127 YT 128
>gi|256425483|ref|YP_003126136.1| glutamate racemase [Chitinophaga pinensis DSM 2588]
gi|256040391|gb|ACU63935.1| glutamate racemase [Chitinophaga pinensis DSM 2588]
Length = 272
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 9/239 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FDSG GGL VL+++ +P+Y +IY D+ PYGN + + +
Sbjct: 1 MTGPIGVFDSGYGGLTVLKEIVATLPQYDYIYFGDNARAPYGNRGFDTIHTYTLQCVQHL 60
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
D P L ++ACNTA T+ + +L P LG + P + TQSG + I
Sbjct: 61 FDMGCP-LVILACNTASARALRTIQQKDLPRIAPDRRVLGVIRPTTEMVGTLTQSGEVGI 119
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T+ I+ + +H ++ + +E + + +KK ++ I
Sbjct: 120 LATKGTVASESYPIEINKFFPHVKVHQLACPMWVPIIENGEADSEGADYFVKKYLDQ--I 177
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D +VLACTHYP++ RQ P + L +A + L R + R+
Sbjct: 178 LTDAPDIDTLVLACTHYPILTKKIRQFLPGGITLLSQGKIVAHGLKDYLHRHPEMEVRL 236
>gi|325124352|gb|ADY83875.1| glutamate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 288
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 13/225 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L D L +
Sbjct: 23 IGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQ 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT R
Sbjct: 82 GCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRG 141
Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIK--KEIEGCFIEKEGK 190
+++ + + + ++S+ L VE G ++ E +K KE+ E +
Sbjct: 142 QLIKDVVEKFAVPAGVKVMTLTSLELVPCVE---AGQQMGEACLKALKEVLQPAAE---Q 195
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
D +VL CTHYP + L +D+ ++AR+ AR L+
Sbjct: 196 GADYLVLGCTHYPFLNQAIHHLFDNQFTLVDSGLAVARQTARILI 240
>gi|15896495|ref|NP_349844.1| glutamate racemase [Clostridium acetobutylicum ATCC 824]
gi|20177983|sp|Q97E66|MURI_CLOAB RecName: Full=Glutamate racemase
gi|15026324|gb|AAK81184.1|AE007821_1 Possible glutamate racemase [Clostridium acetobutylicum ATCC 824]
gi|325510654|gb|ADZ22290.1| glutamate racemase [Clostridium acetobutylicum EA 2018]
Length = 256
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GG+ VL++ +P +FIY D PYG ++ L F + L
Sbjct: 5 NNPIGVIDSGVGGISVLKEAVKQLPYENFIYYGDSKNAPYGIKSVDEVR-NLTFNVVEKL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K V+ACNTA + DELR + ++ +G PA+K A + G I I++TP TL
Sbjct: 64 LKLNIKALVVACNTATSAAIDELREKYKNIPVIGIEPALKPAVELKRRGKIIIMATPMTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
NL+ Y I + L +E+ GI ++ +++++ + F + E
Sbjct: 124 SEVKFKNLMEKYEKDSEIVKLPCPGLVELIED---GI-VEGEKMQEYLRNKFKDYEKDDI 179
Query: 193 DVIVLACTHYPLI 205
VL CTHYP +
Sbjct: 180 AAFVLGCTHYPFV 192
>gi|296112421|ref|YP_003626359.1| glutamate racemase MurI [Moraxella catarrhalis RH4]
gi|295920115|gb|ADG60466.1| glutamate racemase MurI [Moraxella catarrhalis RH4]
Length = 285
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 118/236 (50%), Gaps = 35/236 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL V + + LMP+ ++Y AD PYGN ++FL +D
Sbjct: 17 IGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKS----GDEILFLTLQAVDWL 72
Query: 74 -KYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L +IACN +A++L +R P +G VPA+K A +Q+ I++L+T A
Sbjct: 73 CRQGCKLIIIACNSASAYSLTTLRIRCRIP---IVGLVPAVKPACEMSQTRQIALLATQA 129
Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKE---DEIKKEIEGCFI 185
TL+ + +IH + +H +L VE G+ I D + K+ + +
Sbjct: 130 TLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVES---GMPINHHVADLLIKQTQAWY- 185
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQ-LSPW------PVDWLDNSDSIARRARCLL 234
++G D++VL CTHYP FRQ L W + LD+ +IA+R + LL
Sbjct: 186 -QQG--VDILVLGCTHYPF----FRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLL 234
>gi|262380044|ref|ZP_06073199.1| glutamate racemase [Acinetobacter radioresistens SH164]
gi|262298238|gb|EEY86152.1| glutamate racemase [Acinetobacter radioresistens SH164]
Length = 289
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 13/225 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL V Q++ +P +Y AD PYG D +++ L + L +
Sbjct: 23 IGIFDSGIGGLSVAQEIARHLPHEQILYYADTAHVPYGPRSDQNIRE-LTAQAIEWLYRQ 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+V+ACNTA D LR + S +G VPA+K A +++ ++++L+TPAT R
Sbjct: 82 GCKAAVVACNTASAFSLDYLRKHYGESFPIIGLVPALKPAVLQSKTKVVAVLATPATFRG 141
Query: 135 TYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKEDEIK--KEIEGCFIEKEGK 190
++I + + + ++ + L VE+ G+++ + + K+I +E+
Sbjct: 142 NLIKDVIERFAMPTGVKVLPITCLELVPLVEQ---GLQMSQQCLNTLKKILQPVVEQGA- 197
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
D +VL CTHYP + + + + +D+ ++AR+ AR L+
Sbjct: 198 --DHLVLGCTHYPFLKPAIQAIFGQQLTLVDSGQAVARQTARILI 240
>gi|167752024|ref|ZP_02424151.1| hypothetical protein ALIPUT_00266 [Alistipes putredinis DSM 17216]
gi|167660265|gb|EDS04395.1| hypothetical protein ALIPUT_00266 [Alistipes putredinis DSM 17216]
Length = 255
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 115/242 (47%), Gaps = 32/242 (13%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P + ++DSG+GGL V +++R +PE +Y+ D PYG +
Sbjct: 1 MDNRP--------VGVYDSGLGGLTVWREIRRQLPEESLVYLGDGKNCPYGARPADEIC- 51
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
RL L + V+ACNTA D LR + M +G PA+K A T+SG+
Sbjct: 52 RLADEAVGRLVGAGCKMVVVACNTATAAAIDFLRRKYRQMPIVGMEPAVKPACLNTRSGV 111
Query: 123 ISILSTPATL-----RRT---YTSNL-IHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
+ +L+T +L RRT Y N+ + + V + + L VEE
Sbjct: 112 VGVLATARSLDGDLFRRTAARYGENIRVLTAVGEGFVEL---------VEEDREQSPEAV 162
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ-LSPWPVDWLDNSDSIARRARC 232
+ +++ +E +EG D IVL CTHYP ++ VFRQ + V +D S ++ RR
Sbjct: 163 ETVRRVLEPMI--REG--ADQIVLGCTHYPFLLPVFRQVIGERGVAVVDPSPAVGRRVGQ 218
Query: 233 LL 234
LL
Sbjct: 219 LL 220
>gi|238799428|ref|ZP_04642856.1| Glutamate racemase [Yersinia mollaretii ATCC 43969]
gi|238716722|gb|EEQ08610.1| Glutamate racemase [Yersinia mollaretii ATCC 43969]
Length = 211
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
M + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++
Sbjct: 1 MDIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVG 59
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T T+ +YT +LI + + C I L+ S L E G + + +KK +
Sbjct: 60 LLATRGTVHASYTLDLIARFATDCKIELLGSSELVELAETKLHGGVVPVEALKKILHPWL 119
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+E D IVL CTH+PL+ Q+ P +D+ +IARR L+ +
Sbjct: 120 AMREPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSSQ 177
Query: 245 FDDHALFLSGKPDI-AMRRLMQGFGLKS 271
++ A ++ D A+ ++QG+G +
Sbjct: 178 DENMAYCMALNVDTDALLPVLQGYGFPT 205
>gi|260549201|ref|ZP_05823422.1| glutamate racemase [Acinetobacter sp. RUH2624]
gi|260407929|gb|EEX01401.1| glutamate racemase [Acinetobacter sp. RUH2624]
Length = 288
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 9/223 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG+ V ++ +P H +Y AD PYG D +++ L D L +
Sbjct: 23 IGIFDSGIGGMSVAAEIARYLPNEHIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQ 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT R
Sbjct: 82 GCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRG 141
Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+++ + + + ++++ L VE + + +K+ ++ +
Sbjct: 142 QLIKDVVEKFAVPAGVKVMTLTNLELVPCVEAGQQMSPVCLNALKEVLQ----PAADQGA 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
D +VL CTHYP + L +D+ ++AR+ AR L+
Sbjct: 198 DYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILI 240
>gi|251778481|ref|ZP_04821401.1| glutamate racemase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243082796|gb|EES48686.1| glutamate racemase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 258
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 5/233 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I FDSG+GGL V+++ LMP ++IY D PYG ++
Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAICLMPNENYIYFGDSKNAPYGIKTVEEVRTLTFNAVES 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L++ + V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP
Sbjct: 63 LLEQNVKAI-VVACNTATSAAIDLVRSKYKNIPIIGIEPALKLATKYNRKGNIIIMATPM 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ +L+ Y I S+ A VE GI + +E+++ ++ F +
Sbjct: 122 TLKEKKFKSLMEKYGENYDI---VSLPCAKLVEFIEHGI-LNGEELEEYLKEKFKSYKNN 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
V+VL CTHYP I ++ + +D ++ R L N T
Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTE 230
>gi|229830192|ref|ZP_04456261.1| hypothetical protein GCWU000342_02301 [Shuttleworthia satelles DSM
14600]
gi|229791490|gb|EEP27604.1| hypothetical protein GCWU000342_02301 [Shuttleworthia satelles DSM
14600]
Length = 258
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 106/225 (47%), Gaps = 16/225 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+++ LMP F+Y D PYG E +++ + ++++
Sbjct: 9 IAVFDSGMGGISVLRELVKLMPREDFLYFGDSKNAPYGTRELPEIQELTIRNIQHLMNRG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++V ACNTA + +LR +P+ +G PA+K A G + +++TP T+R
Sbjct: 69 CKAVAV-ACNTATSAAVRKLREMYPNFPIVGIEPAVKPACMENPGGKVLVMATPMTVRLG 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK---EGKRT 192
L + I +S L VEE D+ + + F+E+ +
Sbjct: 128 KLHLLCERFRHVAQIETLSCPGLMEFVEE-------GRDQTPELMH--FLEELLAPYRDV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
D +VL CTHYP + ++L V D + AR LL RI
Sbjct: 179 DAVVLGCTHYPFVRKQVQELMGASVKIYDGAAGTARE---LLRRI 220
>gi|295399429|ref|ZP_06809411.1| glutamate racemase [Geobacillus thermoglucosidasius C56-YS93]
gi|312110012|ref|YP_003988328.1| glutamate racemase [Geobacillus sp. Y4.1MC1]
gi|294978895|gb|EFG54491.1| glutamate racemase [Geobacillus thermoglucosidasius C56-YS93]
gi|311215113|gb|ADP73717.1| glutamate racemase [Geobacillus sp. Y4.1MC1]
Length = 264
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ +Y+ D PYG + +++ + ++
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKERIVYLGDTARCPYGPRPEEEIRQ-FTWEMTNY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + VIACNTA ++ DE+R + LG V P + A T++G I ++ T
Sbjct: 60 LLQYNIKMLVIACNTATAVVLDEIREQL-DIPVLGVVHPGARAALKATKNGHIGVIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + H+ ++ VE + +E KK + +
Sbjct: 119 TVKSGAYEKALKSINPRVHVESLACPKFVPLVESG----NFEGEEAKKIVAESLEPFKSS 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
DV++L CTHYPL+ + ++ V + + D AR +L + T + +H
Sbjct: 175 NMDVLILGCTHYPLLSPLIKEYMGKRVKLICSGDETAREVSAILHHSHLLYTGQRAAEHL 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G ++ + + FG
Sbjct: 235 FFTTGPKELFQKIASKWFG 253
>gi|168217333|ref|ZP_02642958.1| glutamate racemase [Clostridium perfringens NCTC 8239]
gi|182380603|gb|EDT78082.1| glutamate racemase [Clostridium perfringens NCTC 8239]
Length = 260
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 12/231 (5%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L+N+ I FDSG+GGL VL+K +MP ++IY D PYG ++ L F +
Sbjct: 5 LKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIR-SLSFNAIE 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K VIACNTA + +LR + + +G PA+K A ++G + +++T A
Sbjct: 64 FLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKA 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEK 187
TL + L+ Y + + L +E ++ +++K +E ++++
Sbjct: 124 TLTQEKFKKLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDR 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
E IVL CTHYP + V + + VD +D S R + L N
Sbjct: 180 E---ISSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENN 227
>gi|225017223|ref|ZP_03706415.1| hypothetical protein CLOSTMETH_01149 [Clostridium methylpentosum
DSM 5476]
gi|224949998|gb|EEG31207.1| hypothetical protein CLOSTMETH_01149 [Clostridium methylpentosum
DSM 5476]
Length = 268
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 20/254 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
++I IFDSG+GGL V+++++ ++P + +Y D PYG + K+ L FL
Sbjct: 3 NSAIGIFDSGVGGLTVVKELKRILPHENLVYFGDTGRVPYGTRSRQTIIDYAKQDLSFLK 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLISILS 127
S + +++ AC T ++ +E+ P + G +PA++ A + T SG I +L
Sbjct: 63 SKEIK-----MAIAACGTVSAVLPNEIIDELP-FPYTGVLLPAVQTACSKTISGHIGVLG 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+R I + + I + + VE G +++++ + + ++++
Sbjct: 117 TSATIRSGAYGKAIRTILPNARITGIPCPLFVPLVEN---GYVQRDNQVTRLVAQDYLKQ 173
Query: 188 E-GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTR 243
G D ++L CTH+PL+ + + V +D AR A +L +NT + R
Sbjct: 174 VLGSDIDTLILGCTHFPLLKAIIGDIVGPDVRLIDPGRETARFAASVLTSEGLLNTQEER 233
Query: 244 VFDDHALFLSGKPD 257
++ F+S P+
Sbjct: 234 --GSYSFFVSDSPE 245
>gi|313159357|gb|EFR58721.1| glutamate racemase [Alistipes sp. HGB5]
Length = 257
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 6/226 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I ++DSG+GGL V +++R ++P +Y+ D PYG+ +++ + ++ +
Sbjct: 6 IGVYDSGLGGLTVWREVRRMLPSESLVYLGDGKNCPYGSRPREEVRRLADEAVASLVAQG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA D LR + M +G PA+K A T+SG++ +L+T +L
Sbjct: 66 CKMV-VVACNTATAAAIDFLREKYAPMPIVGMEPAVKPACLNTRSGVVGVLATERSLDGE 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y S + VE E ++ + + + G D I
Sbjct: 125 LFRRTAAKYGSGVELITAPGRGFVELVESDRESTPEAEQAVRDAV--AVMLEHG--ADQI 180
Query: 196 VLACTHYPLIVHVF-RQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
VL CTHYP ++ V R ++ V+ +D S ++ARR LL + H
Sbjct: 181 VLGCTHYPFLLPVLERVVAGRGVEIVDPSPAVARRVVQLLDQYGLH 226
>gi|326316343|ref|YP_004234015.1| glutamate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373179|gb|ADX45448.1| Glutamate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 288
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 12/237 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ +R +P F+Y+AD PYG D + R + + +
Sbjct: 6 QRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGHAPYGERGDAYVAARTHAITTYLQ 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA E+R+ + +G PA+K A A T++G + ++ T TL
Sbjct: 66 QTHGIKALVVACNTATAAAIHEVRARHAGLPLVGVEPALKPALALTRTGRVGVIGTRGTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182
L S + LA +E + + EI G
Sbjct: 126 ASAKFQRLQASLQGAVEFVVQPCDGLAHAIERSTADTQ-PDAPATAEIRALCARYTAALG 184
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
F G+ D +VL CTHY + R + V ++ + +AR+ R LL T
Sbjct: 185 PFGTAPGE-IDTLVLGCTHYIFAENALRAHTGPHVRLVETGEPVARQTRRLLEAAGT 240
>gi|291562561|emb|CBL41377.1| glutamate racemase [butyrate-producing bacterium SS3/4]
Length = 275
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 24/237 (10%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M DN P I + DSG+GG+ VL+++ LMP F+Y D PYG +
Sbjct: 18 MNTDNRP--------IGVLDSGLGGISVLRELVKLMPGEAFLYYGDSANAPYGTRTPEEV 69
Query: 61 ----KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS--MAFLGAVPAIKQA 114
KK + FL L++ + V+ACNTA ++ ELR + + +G PA+K A
Sbjct: 70 IDLTKKDVDFL----LERGAKAI-VVACNTATSVAIRELREEYEKKDIPVIGIEPALKPA 124
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
+ + +++TP TL +T ++++H Y + +I + L EY G ++
Sbjct: 125 VLAKEHSKVVVMATPMTLSQTKFNSMLHVYEDEANIIKMPCPGLV----EYIEGGMLEGP 180
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ + +E F E D +VL CTHYPL+ ++ P V D A++ R
Sbjct: 181 VLDEYLEKQFEPYEKSEIDAVVLGCTHYPLVKDEIQKHLPG-VAIYDGGFGTAKQTR 236
>gi|120434578|ref|YP_956873.1| glutamate racemase [Gramella forsetii KT0803]
gi|117576728|emb|CAL65197.1| glutamate racemase [Gramella forsetii KT0803]
Length = 264
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 6/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG + +++ L+P + IY++D PYG + +L ++ L K
Sbjct: 7 IGIFDSGVGGTSIWKEIHRLLPLENTIYLSDSRNAPYGIKTQEKII-QLSIKNTEKLLKL 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA T LRS + + A +G PAIK AA + + I IL+T TL
Sbjct: 66 DCKLIVVACNTATTNAIRILRSAYKT-AIIGIEPAIKPAALKSANKAIGILATRGTLTSE 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ Y ++ V L +E K DE KK + G + D +
Sbjct: 125 LFAQTSELYTRDINVIEVEGNGLVELIENG----KKDADETKKLLLGLLDPMLKAKIDYL 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL C+HYP ++ + ++ P V +D+ +++AR+ + +L
Sbjct: 181 VLGCSHYPYLIPLLEEILPPEVKIIDSGEAVARQTKNIL 219
>gi|228471912|ref|ZP_04056682.1| glutamate racemase [Capnocytophaga gingivalis ATCC 33624]
gi|228276764|gb|EEK15470.1| glutamate racemase [Capnocytophaga gingivalis ATCC 33624]
Length = 260
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 7/224 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG + +++ +P +Y+AD + PYG + +LD +
Sbjct: 5 IGLFDSGVGGTTIWREVVRQLPWESTLYLADSLNAPYGEKSSEEIIALCEKNTEYLLDHH 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ ++ACNTA T LR+ + + F+G PAIK A Y+Q+ I +L+T +TL+
Sbjct: 65 SKLI-IVACNTATTNAITHLRAKY-KVPFIGIEPAIKPAGLYSQTKTIGVLATQSTLKSA 122
Query: 136 YTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ +N + + ++ + L +EE KI E+ +E + D
Sbjct: 123 FFANTCQQLLDKGINVLKQEGIGLVPLIEEG----KIDTPEMMALLEQYLRPMVAEGMDY 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+VL CTHYP + + ++ P V +D++ ++A++ +L + N
Sbjct: 179 LVLGCTHYPYLTSLISEILPENVRIMDSAQAVAKQTERILSQNN 222
>gi|262370036|ref|ZP_06063363.1| glutamate racemase [Acinetobacter johnsonii SH046]
gi|262315075|gb|EEY96115.1| glutamate racemase [Acinetobacter johnsonii SH046]
Length = 289
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 116/237 (48%), Gaps = 18/237 (7%)
Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K N+ I IFDSGIGGL + Q++ +P FIY AD PYG +D +++ L
Sbjct: 13 PMPKATANAPIGIFDSGIGGLSIAQEIAKHLPHERFIYFADTAHVPYGPRDDQNIRE-LT 71
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLIS 124
+ L + ++V+ACNTA D LR + + +G VPA+K A ++S ++
Sbjct: 72 AQAIEWLYRQGCKVAVVACNTASAFSLDYLREHYGDNFPIIGLVPALKPAVLQSKSKTVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMIL------ASRVEEYACGIKIKEDEIKK 178
+L+TPAT R +++ + + ++ L S + A + +D ++
Sbjct: 132 VLATPATFRGQLIKDVVDKFAQPSGVTVIPVTCLDLVPFVESGAQMSAACLATLKDILQP 191
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
++ + D +VL CTHYP + + + + +D+ ++AR+ AR L+
Sbjct: 192 VVD--------QGADYLVLGCTHYPFLKIAIQSIFGQKLTLIDSGLAVARQTARILI 240
>gi|134296381|ref|YP_001120116.1| glutamate racemase [Burkholderia vietnamiensis G4]
gi|134139538|gb|ABO55281.1| glutamate racemase [Burkholderia vietnamiensis G4]
Length = 286
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + +
Sbjct: 17 IGIFDSGLGGLSVLRAVRAQLPGESFVYVADSRHAPYGPRDEAFITERTLAICEWLARDG 76
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R S+ +G P IK AAA + +G+ +L+T +TL
Sbjct: 77 AKAL-VVACNTATARAIAAVRERL-SIPLVGVEPGIKPAAAVSATGVAGVLATQSTLNSP 134
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ Y + L +E ++ +E D +
Sbjct: 135 RFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRALLERYLQPMIDAGADTL 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
VL CTHYP R L + +D SD+IAR+ AR L
Sbjct: 191 VLGCTHYPFFTAAIRDLVGDRLTIVDTSDAIARQLARVL 229
>gi|88810229|ref|ZP_01125486.1| glutamate racemase [Nitrococcus mobilis Nb-231]
gi|88791859|gb|EAR22969.1| glutamate racemase [Nitrococcus mobilis Nb-231]
Length = 284
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 10/220 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V+ +R L+P +YVAD PYG ++ R + L + L
Sbjct: 7 DPIGIFDSGLGGLSVVHAIRRLLPTEQLLYVADCAHAPYGGCSAAFIRTRALAL-AGFLQ 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + LR F + + PA+K+AAA T+ ++ +L+T TL
Sbjct: 66 TQRAKALVVACNTATAAAAEALRRQF-ELPIIAMEPAVKRAAAATRCNVVGVLATEGTLA 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG--CFIEKEGKR 191
+ L+ + + + L VE +I E + +E ++ +G
Sbjct: 125 SARFAGLLARFAGAVQVVTRPAPDLVLLVERG----EIDGIEAMRRVEAHVSYLLHQG-- 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+D IVL CTHYP + + + + + +D ++AR R
Sbjct: 179 SDTIVLGCTHYPHLRPLIERAAGPEIAIIDTGPAVARELR 218
>gi|310641323|ref|YP_003946081.1| glutamate racemase [Paenibacillus polymyxa SC2]
gi|309246273|gb|ADO55840.1| Glutamate racemase [Paenibacillus polymyxa SC2]
Length = 269
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 119/270 (44%), Gaps = 30/270 (11%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I I DSG+GGL V++++ +P IY D PYG +KK D
Sbjct: 1 MQQAIAILDSGVGGLTVVKEVMRQLPREKIIYFGDTARTPYGPRPSEEVKK-FTEQMVDF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L ++ P + +IACNTA T E S S+ +G + P + A + T +G + ++ T
Sbjct: 60 LIQFNPKVIIIACNTA-TAAALEYISQKVSIPVIGVIHPGARAAISATATGYVGVIGTVG 118
Query: 131 TLRR-TYTSNL--------IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
T+R YT+ L + S+ + LV + S+ +E + I+
Sbjct: 119 TIRSGAYTTALKQLSPYVDVVSHACPALVPLVEQGLFRSKTTSQVV------EESLRPIQ 172
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
I D ++L CTHYP + +++ V + ++D AR +L N +
Sbjct: 173 TYPI-------DCLILGCTHYPFLRETIQEVMGPAVKLISSADETARETSTIL--YNKGK 223
Query: 242 TRVFDD---HALFLSGKPDIAMRRLMQGFG 268
D+ H LF SG P++ R Q G
Sbjct: 224 LEAGDETPVHQLFCSGDPELFQRIAAQWLG 253
>gi|238561735|ref|ZP_00441552.2| glutamate racemase [Burkholderia mallei GB8 horse 4]
gi|254203335|ref|ZP_04909696.1| glutamate racemase [Burkholderia mallei FMH]
gi|254205214|ref|ZP_04911567.1| glutamate racemase [Burkholderia mallei JHU]
gi|147745574|gb|EDK52653.1| glutamate racemase [Burkholderia mallei FMH]
gi|147754800|gb|EDK61864.1| glutamate racemase [Burkholderia mallei JHU]
gi|238523998|gb|EEP87433.1| glutamate racemase [Burkholderia mallei GB8 horse 4]
Length = 302
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 17/244 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+ +R + + +YVAD PYG +D + +R + + ++
Sbjct: 27 RAPIGVFDSGLGGLSVLRAVRERLLDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 86
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 87 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 144
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ + + C L +E G + +E + G
Sbjct: 145 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--A 200
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP + R ++ + +D D+IAR RV D+ L
Sbjct: 201 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 249
Query: 253 SGKP 256
P
Sbjct: 250 PASP 253
>gi|328947305|ref|YP_004364642.1| glutamate racemase [Treponema succinifaciens DSM 2489]
gi|328447629|gb|AEB13345.1| Glutamate racemase [Treponema succinifaciens DSM 2489]
Length = 278
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 20/223 (8%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG GG+ + ++ PE +Y+ D V FPYG + + ILD + P
Sbjct: 10 LDSGTGGIPYMLSLKEKSPESRCVYLGDTVHFPYGEKSEEEVTLCASESIEKILDLWNPR 69
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
+ VIACNT ++LR FP + +G VPAIK AA T++ I +L+T AT++ Y
Sbjct: 70 IVVIACNTISVTALNQLRERFPDVPIVGTVPAIKLAAKVTKNKKIGLLATNATVKHPYCK 129
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEIKKEIE-----GCFIEKEGKR 191
L+ + S + L + +E + + + +K ++ GC
Sbjct: 130 KLVSDFASGYEVFNRGDPDLITFIEHDLFYASKEERTAAVKPAVDFFCSCGC-------- 181
Query: 192 TDVIVLACTHYPL----IVHVFRQLSPWPVDWLDNSDSIARRA 230
D I+L CTH+ I F ++ V +D+ D ++ A
Sbjct: 182 -DTIILGCTHFTHMAEDIKEYFSTVAGKKVFVVDSRDGVSNHA 223
>gi|212703906|ref|ZP_03312034.1| hypothetical protein DESPIG_01959 [Desulfovibrio piger ATCC 29098]
gi|212672609|gb|EEB33092.1| hypothetical protein DESPIG_01959 [Desulfovibrio piger ATCC 29098]
Length = 276
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 2/213 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ + +P + +Y+ D PYG + + + ++D+
Sbjct: 9 IGIFDSGMGGLTVLKAISGRLPGENLLYLGDTARLPYGTKSRDTIIRYTLKAAGRLVDEG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+L V+ACNTA + ELR F + LG V P + A A +++ I +++T AT+
Sbjct: 69 VKML-VVACNTATSAALPELREHFAPLPVLGVVRPGAEAAVAASRNKRIVVIATEATIAG 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I S + + + + EE I E + + F + R D
Sbjct: 128 GAYQQAIASLCPEARVQGRACTLFVPLAEEGWMDGPIVEGIASRYLGDLFSPERPDRPDT 187
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+VL CTH+PL R + V +D++++ A
Sbjct: 188 LVLGCTHFPLFREALRHVVGEDVRIVDSAETAA 220
>gi|21673123|ref|NP_661188.1| glutamate racemase [Chlorobium tepidum TLS]
gi|25453118|sp|Q8KFN8|MURI_CHLTE RecName: Full=Glutamate racemase
gi|21646198|gb|AAM71530.1| glutamate racemase [Chlorobium tepidum TLS]
Length = 272
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 6/222 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSGIGGL V++ ++ +P IY D PYG+ ++K +++L
Sbjct: 10 SPIGIFDSGIGGLTVVKAVQAALPSERIIYFGDTARVPYGSKSQVTIRKYARE-DTELLM 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPATL 132
K+QP L ++ACNT L D + T + +G + A + A T+SG I ++ T AT+
Sbjct: 69 KHQPKLIIVACNTVSALALDVVEQTAGGIPVIGVLKAGAELAVQKTKSGRIGVIGTQATI 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + + EE I + E GK
Sbjct: 129 GSNAYTCAIREEKETLEVFPKACPLFVPLAEEGF----IDHPATRLVAEEYLAAFTGKEI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYP++ + ++ + +D+++++A +A LL
Sbjct: 185 DTLVLGCTHYPILRKIIESITGPEITIIDSAEAVASKAGELL 226
>gi|53716293|ref|YP_106352.1| glutamate racemase [Burkholderia mallei ATCC 23344]
gi|121598002|ref|YP_990396.1| glutamate racemase [Burkholderia mallei SAVP1]
gi|124381855|ref|YP_001024891.1| glutamate racemase [Burkholderia mallei NCTC 10229]
gi|126446746|ref|YP_001079232.1| glutamate racemase [Burkholderia mallei NCTC 10247]
gi|167002077|ref|ZP_02267867.1| glutamate racemase [Burkholderia mallei PRL-20]
gi|254176068|ref|ZP_04882726.1| glutamate racemase [Burkholderia mallei ATCC 10399]
gi|254356026|ref|ZP_04972303.1| glutamate racemase [Burkholderia mallei 2002721280]
gi|52422263|gb|AAU45833.1| glutamate racemase [Burkholderia mallei ATCC 23344]
gi|121225800|gb|ABM49331.1| glutamate racemase [Burkholderia mallei SAVP1]
gi|126239600|gb|ABO02712.1| glutamate racemase [Burkholderia mallei NCTC 10247]
gi|148025009|gb|EDK83178.1| glutamate racemase [Burkholderia mallei 2002721280]
gi|160697110|gb|EDP87080.1| glutamate racemase [Burkholderia mallei ATCC 10399]
gi|243062233|gb|EES44419.1| glutamate racemase [Burkholderia mallei PRL-20]
gi|261826533|gb|ABM98669.2| glutamate racemase [Burkholderia mallei NCTC 10229]
Length = 290
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 17/244 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+ +R + + +YVAD PYG +D + +R + + ++
Sbjct: 15 RAPIGVFDSGLGGLSVLRAVRERLLDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLV 74
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 75 AQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ + + C L +E G + +E + G
Sbjct: 133 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYLEPML--EAG--A 188
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP + R ++ + +D D+IAR RV D+ L
Sbjct: 189 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIAR-----------QLARVLDERGLRA 237
Query: 253 SGKP 256
P
Sbjct: 238 PASP 241
>gi|295132492|ref|YP_003583168.1| glutamate racemase [Zunongwangia profunda SM-A87]
gi|294980507|gb|ADF50972.1| glutamate racemase [Zunongwangia profunda SM-A87]
Length = 263
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 12/233 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFS 69
+NSI IFDSGIGG + +++ L+P +Y+AD PYG E L ++
Sbjct: 3 KNSIGIFDSGIGGTSIWREIHELLPFEDTVYLADSFNAPYGIKTREEIIELSRKNTIKLL 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ K + V+ACNTA T +ELR+ F ++F+G PAIK AA +++ I IL+T
Sbjct: 63 ELGAK----IIVVACNTATTNAINELRNEF-DVSFIGIEPAIKPAALQSRTKNIGILATK 117
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + + Y + V L +E KI E+ ++
Sbjct: 118 GTLSSSLFTKTSDLYTQGLKVIEVEGNGLVELIE----AGKIYSTEMDLLLDQLLAPLIS 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL C+HYP ++ ++ + +D+ +++AR+ + +L + N T
Sbjct: 174 QPIDYLVLGCSHYPYLIPRLKEKFHPALSIIDSGEAVARQTKAILEKENLLNT 226
>gi|299771738|ref|YP_003733764.1| glutamate racemase [Acinetobacter sp. DR1]
gi|298701826|gb|ADI92391.1| glutamate racemase [Acinetobacter sp. DR1]
Length = 288
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 19/228 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L D L +
Sbjct: 23 IGIFDSGIGGMSVAAEIARYLPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQ 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT R
Sbjct: 82 GCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRG 141
Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEE-----YACGIKIKEDEIKKEIEGCFIEK 187
+++ + + + ++S+ L VE AC +KE +G
Sbjct: 142 QLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMGEACLTALKEVLQPAAEQG----- 196
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
D +VL CTHYP + L +D+ ++AR+ AR L+
Sbjct: 197 ----ADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGFAVARQTARILI 240
>gi|254520425|ref|ZP_05132481.1| glutamate racemase [Clostridium sp. 7_2_43FAA]
gi|226914174|gb|EEH99375.1| glutamate racemase [Clostridium sp. 7_2_43FAA]
Length = 257
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 13/227 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GGL V+++ +MP ++IY D PYG ++ +L+K
Sbjct: 8 IGFFDSGVGGLSVMKEAIQVMPNENYIYFGDSKNAPYGVKSVEEVRDLTFKAVEFLLNKG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ IACNTA + +LR +P + +G PA+K A + G I I++T TL+
Sbjct: 68 VKGIA-IACNTATSAAVADLRKIYPDLPLVGIEPALKPAVELNKDGNILIMATSMTLKEE 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK----EGKR 191
+ L++ Y + I V L +E KE+E EK G +
Sbjct: 127 KFNRLMNRYKDRASIIPVPCPGLVEFIEAGKLD--------GKEVEEYLFEKVNTYNGGK 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
IVL CTHYP I ++ + +D A+ R L N
Sbjct: 179 IASIVLGCTHYPFIKDTLVKIIGKDITIIDGGLGTAKELRRRLSEKN 225
>gi|258647676|ref|ZP_05735145.1| glutamate racemase [Prevotella tannerae ATCC 51259]
gi|260852505|gb|EEX72374.1| glutamate racemase [Prevotella tannerae ATCC 51259]
Length = 285
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 112/235 (47%), Gaps = 9/235 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GG+ +L++ + L+P+Y ++Y+ D+ PYG+ + + + + +
Sbjct: 12 IGVFDSGYGGMTILRQFKRLLPQYDYLYLGDNARAPYGSHSFEVIYQYTLEAVEALFKRG 71
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
P L ++ACNTA TL +++L + +P LG + P ++ A TQS I +L T
Sbjct: 72 CP-LVILACNTASAKALRTLQQNDLPARYPDRRVLGVIRPTVETVAGLTQSHHIGLLGTV 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + + ++ + VE Y + ++K ++ F +
Sbjct: 131 GTISSGSYTMEFAKIDPSAKLTGMACPMWVPLVENYEFDSPGADYFVRKRLDALF--ESD 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D ++L CTHYPL++ Q +P V ++ +A + + L R + R+
Sbjct: 189 PQIDTLILGCTHYPLLLEKISQFTPPNVKIVEQGAYVAEKLQDYLQRHPEMEVRL 243
>gi|323699601|ref|ZP_08111513.1| glutamate racemase [Desulfovibrio sp. ND132]
gi|323459533|gb|EGB15398.1| glutamate racemase [Desulfovibrio desulfuricans ND132]
Length = 279
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 6/217 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + ++++ +
Sbjct: 9 IGMFDSGVGGLTVLKALRERMPCEDVLYLGDTARLPYGTKSPQTVTRYGVQCGAELIKRG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+L V+ACNTA + D LR P + +G V P + A T + +++++T +T+
Sbjct: 69 IKLL-VVACNTASAVALDALREANPGVPVIGVVDPGARAACQATTNQAVAVIATESTIAG 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR--- 191
IH+ Q I + + EE + E + ++ F G
Sbjct: 128 GAYQRAIHAINPQARILGHPCPLFVALAEEGWTDGHVPEAVAARYLDPIFKPASGTEHPV 187
Query: 192 -TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTH+PL+ R + P +D++ + A
Sbjct: 188 IPDTLVLGCTHFPLLAPAIRNVVPEHTTIVDSAATTA 224
>gi|120610174|ref|YP_969852.1| glutamate racemase [Acidovorax citrulli AAC00-1]
gi|120588638|gb|ABM32078.1| glutamate racemase [Acidovorax citrulli AAC00-1]
Length = 296
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ +R +P F+Y+AD PYG D + R + +
Sbjct: 6 QRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGNAPYGERGDAYVAARTHAIAGYLQ 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA E+R+ + +G PA+K A + T++G + ++ T TL
Sbjct: 66 RTHGIKALVVACNTATAAAIHEVRARHADLPLVGVEPALKPALSLTRTGRVGVIGTRGTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE----------G 182
L S + LA +E + + +D EI G
Sbjct: 126 SSAKFQRLRASLQGPVEFVVQPCDGLAHAIER-STADTLPDDPATAEIRALCARYMAALG 184
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
F G+ D +VL CTHY R + V ++ + +AR+ R
Sbjct: 185 PFGAAPGE-IDTLVLGCTHYLFAEDALRAHTGPQVRLVETGEPVARQTR 232
>gi|308068443|ref|YP_003870048.1| glutamate racemase [Paenibacillus polymyxa E681]
gi|305857722|gb|ADM69510.1| Glutamate racemase [Paenibacillus polymyxa E681]
Length = 271
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 30/270 (11%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I I DSG+GGL V++++ +P IY D PYG +KK D
Sbjct: 3 VQQAIAILDSGVGGLTVVKEVMRQLPREKIIYFGDTARTPYGPRPSEEVKK-FTEQMVDF 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L ++ P + +IACNTA D + S+ +G + P + A + T +G + ++ T
Sbjct: 62 LIQFDPKVIIIACNTATAAALDYISQKV-SIPVIGVIHPGARAAISATATGHVGVIGTVG 120
Query: 131 TLRR-TYTSNL--------IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
T+R YT+ L + S+ + LV + S+ +E + I+
Sbjct: 121 TIRSGAYTAALKQLSPYVDVVSHACPALVPLVEQGLFRSKTTSQVV------EETLRPIQ 174
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
I D ++L CTHYP + +++ V + ++D AR +L N +
Sbjct: 175 TYPI-------DCLILGCTHYPFLKETIQEVMGPAVKLISSADETARETSTIL--YNKGK 225
Query: 242 TRVFDD---HALFLSGKPDIAMRRLMQGFG 268
D+ H LF SG P++ R Q G
Sbjct: 226 LEAGDETPVHQLFCSGDPELFQRIAAQWLG 255
>gi|292669543|ref|ZP_06602969.1| glutamate racemase [Selenomonas noxia ATCC 43541]
gi|292648752|gb|EFF66724.1| glutamate racemase [Selenomonas noxia ATCC 43541]
Length = 262
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 9/218 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL R ++P F++ AD PYG A++ + F ++++
Sbjct: 3 IALFDSGIGGLTVLSHARRVLPSEDFLFFADRDHVPYGTKSVPAVRGFVREAFHFLVEQQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++ DE+R + ++ +G PA+K+A + + +TP T+
Sbjct: 63 KADTVVVACNTATSVAVDEMRRLY-AVPIIGMEPAVKKALERDTERRVLVTATPITVNGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +Y + I L++ R+ E+A + ++ + + I
Sbjct: 122 KLRRLISAYDTGGCIDLLA----LPRLVEFAEEREFVSPRVENYLRSALAPYDLINYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDS----IARR 229
VL CTH+ RQ+ P V ++D ++ +ARR
Sbjct: 178 VLGCTHFNYFKDTLRQIMPQTVGFVDGNEGTVEELARR 215
>gi|169634511|ref|YP_001708247.1| glutamate racemase [Acinetobacter baumannii SDF]
gi|239500887|ref|ZP_04660197.1| glutamate racemase [Acinetobacter baumannii AB900]
gi|169153303|emb|CAP02411.1| glutamate racemase [Acinetobacter baumannii]
gi|193076216|gb|ABO10839.2| glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 288
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 10/233 (4%)
Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K L ++ I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L
Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LT 71
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124
D L + ++V+ACNTA D LR + +G VPA+K A T+S +++
Sbjct: 72 ARAVDWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+TPAT R +++ + + + ++S+ L VE + + +++ ++
Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQP 191
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
++G D +VL CTHYP + L +D+ ++AR+ AR L+
Sbjct: 192 AV--EQG--ADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILI 240
>gi|302391765|ref|YP_003827585.1| glutamate racemase [Acetohalobium arabaticum DSM 5501]
gi|302203842|gb|ADL12520.1| glutamate racemase [Acetohalobium arabaticum DSM 5501]
Length = 250
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL++ ++P +IY AD PYG +K + I D+
Sbjct: 3 IGFFDSGVGGITVLKEALKVLPNKDYIYYADTANVPYGTKPKEEVKHYVFDAVDFITDQG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA ++ ++LR F +G PA+K A ++ + + +TP TL+
Sbjct: 63 INAL-VIACNTATSVAVNDLRDEF-QFPIIGMEPAVKPAVEKNKTKKVLVTATPLTLQEE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ S+ ++ S+ L V E+A E+ I +E F + R I
Sbjct: 121 KLWELVAKIGSK---DIIDSLPLPKLV-EFAENFIFDEETILSYLEERFSSYDLNRYSSI 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLD-NSDSIARRARCL 233
VL CTH+ +FR++ P V+ +D N ++ + R L
Sbjct: 177 VLGCTHFIFYRRLFRKIIPDDVEIIDGNRGAVKQLKRQL 215
>gi|260556259|ref|ZP_05828478.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
gi|260410314|gb|EEX03613.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
Length = 288
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 10/233 (4%)
Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K L ++ I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L
Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LT 71
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124
D L + ++V+ACNTA D LR + +G VPA+K A T+S +++
Sbjct: 72 ARAVDWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+TPAT R +++ + + + ++S+ L VE + + +++ ++
Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQP 191
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
++G D +VL CTHYP + L +D+ ++AR+ AR L+
Sbjct: 192 AV--EQG--ADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILI 240
>gi|94311212|ref|YP_584422.1| glutamate racemase [Cupriavidus metallidurans CH34]
gi|93355064|gb|ABF09153.1| glutamate racemase [Cupriavidus metallidurans CH34]
Length = 270
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 6/212 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL+++R L+P +Y AD PYG + ++ R + + ++ +
Sbjct: 8 IFDSGLGGLSVLREVRALLPHESLLYFADSRYAPYGEKPERFVEARTLQVCEWLVAQGCK 67
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACNTA LR ++ +G P +K AAA ++S ++ +L+T TL+
Sbjct: 68 AL-VIACNTATMHAVQTLRERL-AVPIIGVEPGLKPAAAASRSKVVGVLATANTLKSAKF 125
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ L+ S ++ + + L +E+ + D +++ + D +VL
Sbjct: 126 NRLLTSLGNESRFLCEAGVGLVPLIEQG----DVSSDTVRQTLGTLLSPMLEAGADTLVL 181
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
CTHYP + L + +D +IAR+
Sbjct: 182 GCTHYPFLSETIDDLVDGRLALIDTGVAIARQ 213
>gi|71066509|ref|YP_265236.1| glutamate racemase [Psychrobacter arcticus 273-4]
gi|71039494|gb|AAZ19802.1| glutamate racemase [Psychrobacter arcticus 273-4]
Length = 330
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 10/238 (4%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ID + I +FDSGIGGL V + +P +IY AD + PYGN + +K
Sbjct: 37 EIDTKGIKADRSAPIGLFDSGIGGLSVYLHLAHQLPNERYIYYADTLHVPYGNRDSEDIK 96
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
L L + L VIACN+A + R +P + +G VPA+K A ++SG
Sbjct: 97 A-LTLTAVKWLHQQGCKLIVIACNSASAYALETARHHYPQLPIVGLVPALKPAVLASKSG 155
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKE 179
+++L+T ATL T +++I S + L VE ++++
Sbjct: 156 HVAVLATKATLNGTLLNDVITKIASPSATRVTKYFDPQLVPWVESGMPENSKTAQNLRQQ 215
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ---LSPWPVDWLDNSDSIARRARCLL 234
++ K+G D +VL CTHYP Q + +D+ +IA R + LL
Sbjct: 216 LQ--VFAKDG--IDQLVLGCTHYPFFKDFLMQEIEEQKLSMQVVDSGQAIAERVKQLL 269
>gi|184156710|ref|YP_001845049.1| glutamate racemase [Acinetobacter baumannii ACICU]
gi|332873119|ref|ZP_08441076.1| glutamate racemase [Acinetobacter baumannii 6014059]
gi|183208304|gb|ACC55702.1| Glutamate racemase [Acinetobacter baumannii ACICU]
gi|322506599|gb|ADX02053.1| murI [Acinetobacter baumannii 1656-2]
gi|323516476|gb|ADX90857.1| glutamate racemase [Acinetobacter baumannii TCDC-AB0715]
gi|332738631|gb|EGJ69501.1| glutamate racemase [Acinetobacter baumannii 6014059]
Length = 288
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 20/238 (8%)
Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K L ++ I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L
Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LT 71
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124
D L + ++V+ACNTA D LR + +G VPA+K A T+S +++
Sbjct: 72 ARAVDWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVE-----EYACGIKIKEDEIK 177
+L+TPAT R +++ + + + ++S+ L VE AC ++E ++
Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPACLNALRE-VLQ 190
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
+E + D +VL CTHYP + L +D+ ++AR+ AR L+
Sbjct: 191 PAVE--------QGADYLVLGCTHYPFLNEAIHYLFDNQFTLVDSGLAVARQTARILI 240
>gi|218280883|ref|ZP_03487507.1| hypothetical protein EUBIFOR_00065 [Eubacterium biforme DSM 3989]
gi|218217817|gb|EEC91355.1| hypothetical protein EUBIFOR_00065 [Eubacterium biforme DSM 3989]
Length = 258
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+N I +FDSG+GG+ VL M L+P + IY+ D PYG + KR + + + +
Sbjct: 4 KNPIGVFDSGLGGISVLHTMHSLLPNENLIYLGDSKYNPYGTKTKEEITKRCIAICDEFI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + LR + + +G PA+K A + I++ +T TL
Sbjct: 64 KQDVKAI-VIACNTATSACVKLLREKY-DVDIIGMEPALKVACDRGNNQRIAVWATELTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKIKEDEIKKEIEGCFIEKEGKR 191
+NL+ + + HI V L VE+ + E +K+ + C + K
Sbjct: 122 SEKKFANLMDRFKDEHHIVKVPCPKLVRMVEDDKLDDTNLVESVLKEYLAAC----DYKN 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
D IVL CTH+P +L P
Sbjct: 178 LDSIVLGCTHFPFYTKYLERLCP 200
>gi|183602360|ref|ZP_02963726.1| glutamate racemase [Bifidobacterium animalis subsp. lactis HN019]
gi|219683325|ref|YP_002469708.1| glutamate racemase [Bifidobacterium animalis subsp. lactis AD011]
gi|241191286|ref|YP_002968680.1| glutamate racemase [Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196692|ref|YP_002970247.1| glutamate racemase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|254766107|sp|B8DT03|MURI_BIFA0 RecName: Full=Glutamate racemase
gi|183218279|gb|EDT88924.1| glutamate racemase [Bifidobacterium animalis subsp. lactis HN019]
gi|219620975|gb|ACL29132.1| glutamate racemase [Bifidobacterium animalis subsp. lactis AD011]
gi|240249678|gb|ACS46618.1| glutamate racemase [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240251246|gb|ACS48185.1| glutamate racemase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|289177402|gb|ADC84648.1| Glutamate racemase [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794279|gb|ADG33814.1| glutamate racemase [Bifidobacterium animalis subsp. lactis V9]
Length = 258
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GG+ V++++R +P +Y D PYG ++ + D +++
Sbjct: 9 VFDSGLGGISVVRQIRTDLPHERILYFGDSANAPYGTKTPEQVRDLSFRIVEDFVEQGAK 68
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLRRT 135
+ VIACNTA + ELR + + +G PA+K A + + + + +TP TLR
Sbjct: 69 AV-VIACNTATSSAVQELREHY-DIPIIGMEPALKVACDRGHGERQSVIVAATPLTLRER 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+H + IH L VE G D + + + F + + TD +
Sbjct: 127 KFAALMHRFEDAHTIHKQPCPRLVEIVER---GELDDHDLVMRTLHDYFDQYDLAHTDSV 183
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ FR+L P V +D ++ AR +L + D + +
Sbjct: 184 VLGCTHFVFYRDYFRELLPNNVAIVDGNEGTARHLEVVLESLGKLAPEEQDGGVILRNSD 243
Query: 256 PDIAMRRLMQ 265
P + L Q
Sbjct: 244 PGERIAELAQ 253
>gi|169797366|ref|YP_001715159.1| glutamate racemase [Acinetobacter baumannii AYE]
gi|213155819|ref|YP_002317864.1| glutamate racemase [Acinetobacter baumannii AB0057]
gi|215484806|ref|YP_002327041.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|301345461|ref|ZP_07226202.1| glutamate racemase [Acinetobacter baumannii AB056]
gi|301511091|ref|ZP_07236328.1| glutamate racemase [Acinetobacter baumannii AB058]
gi|332851876|ref|ZP_08433779.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332867934|ref|ZP_08437922.1| glutamate racemase [Acinetobacter baumannii 6013113]
gi|169150293|emb|CAM88190.1| glutamate racemase [Acinetobacter baumannii AYE]
gi|213054979|gb|ACJ39881.1| glutamate racemase [Acinetobacter baumannii AB0057]
gi|213987180|gb|ACJ57479.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|332729661|gb|EGJ60997.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332733635|gb|EGJ64794.1| glutamate racemase [Acinetobacter baumannii 6013113]
Length = 288
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 10/233 (4%)
Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K L ++ I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L
Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRE-LT 71
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124
D L + ++V+ACNTA D LR + +G VPA+K A T+S +++
Sbjct: 72 ARAVDWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+TPAT R +++ + + + ++S+ L VE + + +++ ++
Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQP 191
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
++G D +VL CTHYP + L +D+ ++AR+ AR L+
Sbjct: 192 AV--EQG--ADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILI 240
>gi|224025256|ref|ZP_03643622.1| hypothetical protein BACCOPRO_01993 [Bacteroides coprophilus DSM
18228]
gi|224018492|gb|EEF76490.1| hypothetical protein BACCOPRO_01993 [Bacteroides coprophilus DSM
18228]
Length = 280
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 10/243 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG GGL +L K+R LMP +IY+ D+ PYG + + + + + P
Sbjct: 14 VFDSGYGGLTILAKIRELMPHNDYIYLGDNARTPYGTRSFEVVYEFTLQAVRKLFELGCP 73
Query: 78 VLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
L ++ACNTA ++ +++L P+ LG + P ++ A T + + +L+TP T
Sbjct: 74 -LVILACNTASAKALRSIQQNDLPYLDPTRRVLGVIRPTVESIGALTATRHVGVLATPGT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ IH + + + VE + + ++K I+G +
Sbjct: 133 ILSESYPLEIHKLFPDVQVTGMPCPMWVPLVENNEFASEGADYFVRKYIDGLL--SQDPE 190
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250
D ++L CTHYPL++ R+ +P + + + +AR + L R +R + H
Sbjct: 191 IDTLILGCTHYPLLLDKIRRFTPSHIRLVAQGEYVARSLKDYLSRHTEMNSRCTCNGHCE 250
Query: 251 FLS 253
FL+
Sbjct: 251 FLT 253
>gi|94987309|ref|YP_595242.1| glutamate racemase [Lawsonia intracellularis PHE/MN1-00]
gi|94731558|emb|CAJ54921.1| Glutamate racemase [Lawsonia intracellularis PHE/MN1-00]
Length = 286
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 13/248 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VLQ ++ LMP +++Y+ D PYG + + S ++++
Sbjct: 7 IGLFDSGVGGLTVLQALQNLMPNENYLYLGDTARLPYGTKSPKTVLHYAIQSASTLIER- 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
Q L +IACNTA L+ TFP + +G + P+ + A + G +++++T +T++
Sbjct: 66 QIKLLIIACNTATAAALPLLQETFPFIPIIGVIEPSAQIACKTSLKGHVAVIATESTIQG 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-RTD 193
I Y + + + + VEE I E I + F + K + D
Sbjct: 126 KCYEETILRYRPEILVESKACPLFVPIVEEGWFSGPIVESIIIHYLSSLFFNRSIKDQPD 185
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR-CLL------PRINTHQTRVF- 245
+VL CTHYPL+ +++ + +D++ + A+ + C++ P N + +F
Sbjct: 186 CLVLGCTHYPLLSETIQKIIGNDITIVDSTVATAKLVQACIIQHNMVNPNTNLIGSTIFL 245
Query: 246 --DDHALF 251
DD F
Sbjct: 246 TTDDKVRF 253
>gi|212213193|ref|YP_002304129.1| glutamate racemase [Coxiella burnetii CbuG_Q212]
gi|212011603|gb|ACJ18984.1| glutamate racemase [Coxiella burnetii CbuG_Q212]
Length = 280
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 10/227 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ +P +IY+ D PYG + R + IL
Sbjct: 7 IGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETV-SRYATQMASILITQ 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T++
Sbjct: 66 NIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTIQS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EG-KR 191
N + + Q I + + + EE C DEI + ++E G +
Sbjct: 126 GIYQNTLRALSPQIEITTQTCGLFVALAEE-GC----TNDEIALLVAKKYLEPIINGYHQ 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D ++L CTH+P+++ + ++ ++++ + A + +L + N
Sbjct: 181 CDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNN 227
>gi|262067163|ref|ZP_06026775.1| glutamate racemase [Fusobacterium periodonticum ATCC 33693]
gi|291379121|gb|EFE86639.1| glutamate racemase [Fusobacterium periodonticum ATCC 33693]
Length = 264
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 7/191 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D K
Sbjct: 8 IGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILDFFVKN 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST T
Sbjct: 68 NCKLVIVACNTASTAAIDYLREKFP-LPILGIVEAGIKIARKNTKTKNIAVISTKFTAES 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
N ++ ++ ++ + +E +E+ + K ++ + K D
Sbjct: 127 HGYKNKAKMIDTELNVKEIACVEFPMMIETGWETFDNREELLNK-----YLSEIPKNVDT 181
Query: 195 IVLACTHYPLI 205
+VL CTHYPLI
Sbjct: 182 LVLGCTHYPLI 192
>gi|160915680|ref|ZP_02077888.1| hypothetical protein EUBDOL_01688 [Eubacterium dolichum DSM 3991]
gi|158432156|gb|EDP10445.1| hypothetical protein EUBDOL_01688 [Eubacterium dolichum DSM 3991]
Length = 258
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 6/224 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG+GG+ VL+++ LMP+ + +Y D PYG + +R +
Sbjct: 3 VNSPIGIFDSGMGGISVLKQIHALMPQENLLYFGDSAYAPYGEKSRAEITERCYSICEFF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ K + VIACNTA + +ELR + ++ +G PA+K AA Q I +L+T T
Sbjct: 63 MRKKVKAI-VIACNTATSACVNELRKRYLNIPIIGMEPALKVAADNEQQQHILVLATYFT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE-IKKEIEGCFIEKEGK 190
L+ ++L+ + I+ L VEE+ K++++E +K+ + +
Sbjct: 122 LKEKKFADLMARCEKEHIIYKQPCPALVHIVEEH----KLQDEELVKQTLRNYLAPYNLE 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ IVL CTH+ +L P + +D + A++ + LL
Sbjct: 178 EINSIVLGCTHFVFYRKYLTELLPKHIAIIDGNTGTAKQVKHLL 221
>gi|154503523|ref|ZP_02040583.1| hypothetical protein RUMGNA_01347 [Ruminococcus gnavus ATCC 29149]
gi|153795623|gb|EDN78043.1| hypothetical protein RUMGNA_01347 [Ruminococcus gnavus ATCC 29149]
Length = 276
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
CEKK + I +FDSG+GGL V++++ +P + +Y D PYG+ K +
Sbjct: 5 CEKK-KAPIGVFDSGVGGLTVVREITRQLPHENIVYFGDTARVPYGSK-----SKSNIIR 58
Query: 68 FSD----ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122
FS+ L Q VIACNTA L D +R F + +G VP + A T +G
Sbjct: 59 FSEQIIRFLKTKQVKAIVIACNTASALALDAVRDEF-DIPIIGVIVPGARAAVEATANGE 117
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I ++ T AT++ + +IH H+ + + VEE KE + +E+
Sbjct: 118 IGVVGTDATVKSGTYTKVIHQMDPNIHVREKACPLFVPLVEE-----GFKEHVVTEEVIE 172
Query: 183 CFIEK-EGKRTDVIVLACTHYPLI 205
++E + D ++L CTHYPL+
Sbjct: 173 YYLESLKHTEIDAMILGCTHYPLL 196
>gi|308068806|ref|YP_003870411.1| glutamate racemase [Paenibacillus polymyxa E681]
gi|305858085|gb|ADM69873.1| Glutamate racemase [Paenibacillus polymyxa E681]
Length = 267
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 18/230 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL + +P +F+Y+AD + PYG + + IL +
Sbjct: 3 IGFFDSGLGGITVLSEALRRLPNENFVYMADTLHVPYGTKTPQEVLGYVKASVETILKED 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133
L VIACNTA ++ ELR +P + +G PA+K A ++ + +L+TP TL+
Sbjct: 63 VKAL-VIACNTATSIAVAELRKEYP-IPIIGMEPAVKPAVEMNRANGKRVLVLATPLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEI----KKEIEGCFIEKE 188
++ + L VS+ H V S+ L V +Y + E+ +E+ ++
Sbjct: 121 QSCYAAL----VSRVDDHGSVDSLPLPELV-QYCEQLNFDRAEMSEYFNRELSSFNLDIY 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
G +VL CTHYP + R+L P + +D S RR + +L N
Sbjct: 176 G----TVVLGCTHYPFYKEILRELLPSHIQLIDGSQGTVRRLKQVLSERN 221
>gi|154707217|ref|YP_001425115.1| glutamate racemase [Coxiella burnetii Dugway 5J108-111]
gi|154356503|gb|ABS77965.1| glutamate racemase [Coxiella burnetii Dugway 5J108-111]
Length = 280
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 10/227 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ +P +IY+ D PYG + R + IL
Sbjct: 7 IGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETV-SRYATQMASILIAQ 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T++
Sbjct: 66 NIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTIQS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EG-KR 191
N + + Q I + + + EE C DEI + ++E G +
Sbjct: 126 GIYQNTLRALSPQIEITTQTCGLFVALAEE-GC----TNDEIALLVAKKYLEPIINGYHQ 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D ++L CTH+P+++ + ++ ++++ + A + +L + N
Sbjct: 181 CDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNN 227
>gi|237740114|ref|ZP_04570595.1| glutamate racemase [Fusobacterium sp. 2_1_31]
gi|229422131|gb|EEO37178.1| glutamate racemase [Fusobacterium sp. 2_1_31]
Length = 264
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D
Sbjct: 5 RQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILDFF 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
K L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST T
Sbjct: 65 VKNNCKLVIVACNTASTAAIDYLREKFP-LPILGIVEAGIKIARKNTKTKNIAVISTKFT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
N ++ ++ ++ + +E +E+ + K ++ + K
Sbjct: 124 AESHGYKNKAKMIDTELNVKEIACVEFPMMIETGWDTFDNREELLNK-----YLAEIPKN 178
Query: 192 TDVIVLACTHYPLI 205
D +VL CTHYPLI
Sbjct: 179 VDTLVLGCTHYPLI 192
>gi|261856843|ref|YP_003264126.1| glutamate racemase [Halothiobacillus neapolitanus c2]
gi|261837312|gb|ACX97079.1| glutamate racemase [Halothiobacillus neapolitanus c2]
Length = 288
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V Q +R +P IY+AD PYG+ + +R + + + L
Sbjct: 17 IGIFDSGVGGLSVYQAVRHALPAEDIIYIADSGHAPYGDRSSDFITERAVAM-TGFLVAA 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + +LR F S+ + PAIK A +++SG I +L+T T+
Sbjct: 76 GAKAVVVACNTATVIAVAQLRRQF-SIPIIALEPAIKPAIEHSRSGTIGVLATRKTIESP 134
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK--EIEGCFIEK-EGKRT 192
L C IH ++ +L + ++ E E K E+ ++E
Sbjct: 135 AVERL-------CRIHGANTRVLLQPCPGFVEQVERGEMEHPKTYELIRRYVEPLLASGA 187
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D +VL CTHY + R + V LD+S ++AR+
Sbjct: 188 DTLVLGCTHYVYLAQQIRAIVGPDVTILDSSAAVARQ 224
>gi|258405574|ref|YP_003198316.1| glutamate racemase [Desulfohalobium retbaense DSM 5692]
gi|257797801|gb|ACV68738.1| glutamate racemase [Desulfohalobium retbaense DSM 5692]
Length = 279
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 9/247 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I +FDSG+GGL VL+++ ++P YVAD PYG + +++R + L +
Sbjct: 11 MEGGIGVFDSGVGGLSVLKEIDRVLPHEDLWYVADSAEAPYGEKSEEEIRQRSLELARFL 70
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + L VIACNTA +ELR+ P PA+K A A + SG I +L+T T
Sbjct: 71 VQRGAKAL-VIACNTATAAAAEELRAQCPVPVVA-VEPAVKPAVALSCSGCIGVLATTGT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L+ L+ Y + + + L RVE + + + + + G +++ +R
Sbjct: 129 LQSKRFQALLKRYAGSAEVAVQACPGLVERVE-----MGDLDGPVTRVLLGSYVQALAER 183
Query: 192 -TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + + R + LD ++AR L R+ +
Sbjct: 184 GADTLVLGCTHYPFLRPLVRDCIGETMPVLDTGLAVARHLHSELRRLELERPAARQGQRR 243
Query: 251 F-LSGKP 256
F +G+P
Sbjct: 244 FWTTGEP 250
>gi|164687228|ref|ZP_02211256.1| hypothetical protein CLOBAR_00869 [Clostridium bartlettii DSM
16795]
gi|164603652|gb|EDQ97117.1| hypothetical protein CLOBAR_00869 [Clostridium bartlettii DSM
16795]
Length = 258
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I +FDSG+GG+ VL+ ++ LMP FIY D PYG + KR + + +
Sbjct: 5 KKAIGVFDSGLGGISVLRDLKKLMPNEDFIYFGDSAYAPYGIKTKDEITKRCVEIIDFFI 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K + VIACNTA + + LR + + +G PA+K A ++ I +++TP TL
Sbjct: 65 EKGVKAV-VIACNTATSASANYLRKKYKDLPIIGMEPALKVATQGVKNNNIVVMATPLTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+H + + V M VE + E + +++ +
Sbjct: 124 KEKKFETLMHKFRGN---NKVVKMPCPKLVEIVENDLLDDETTVVNQLKDYYKNVNVDNL 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
D +VL CTH+ + P +D + + + +L +
Sbjct: 181 DSVVLGCTHFIFYKDYLNEFLPETAHLVDGNMGTCKHVKEILEQ 224
>gi|297618209|ref|YP_003703368.1| glutamate racemase [Syntrophothermus lipocalidus DSM 12680]
gi|297146046|gb|ADI02803.1| glutamate racemase [Syntrophothermus lipocalidus DSM 12680]
Length = 273
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 121/259 (46%), Gaps = 19/259 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V++++ +P + IY+ D PYG L RL D L
Sbjct: 9 VFDSGVGGLTVVKEIIKRLPCENIIYIGDTANVPYGGKPPQEL-IRLGKNIIDFLINQGA 67
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V ACNT+ ++ LR P VP AAA T++G + +++T AT++
Sbjct: 68 KAVVAACNTSSSVSIPILRDMCPVPVIDVIVPGAANAAAVTRNGRVGVIATEATVKTGAY 127
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DVIV 196
+ I + ++ V+ VE+ ++ DE+ +E+ +++ ++ D +V
Sbjct: 128 TRHIKALSPGISVYEVACPRFVPLVEQGV----LEGDEV-EEVANEYLQPLRRQGIDTLV 182
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-------PRINTHQTRVF---D 246
+ CTHYP ++ V +++ V +D ++ A R R L P + Q R F
Sbjct: 183 IGCTHYPFLIPVIQKVMGKGVRLVDPAEETASRLRATLLERGLDNPGTTSPQYRFFATGS 242
Query: 247 DHALFLSGK--PDIAMRRL 263
+ F GK P+I +R++
Sbjct: 243 SESFFRVGKLLPEIDIRKV 261
>gi|86140719|ref|ZP_01059278.1| glutamate racemase [Leeuwenhoekiella blandensis MED217]
gi|85832661|gb|EAQ51110.1| glutamate racemase [Leeuwenhoekiella blandensis MED217]
Length = 263
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 11/259 (4%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+QN I +FDSG+GG + +++ +P IY+AD PYG + +
Sbjct: 1 MQNKRPIGVFDSGVGGTSIWKEIVAKLPYEDSIYLADIKNAPYGERSKEEIIALSVKNTE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++D+ ++ V+ACNTA T D LR+ + + F+G PAIK AA +++ I IL+T
Sbjct: 61 YLIDQGCKII-VVACNTATTNAIDVLRANY-DIPFIGIEPAIKPAALASKTKAIGILATK 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + Y S+ ++ V L +E + + +K IE
Sbjct: 119 GTLSSALFARTSSLYTSELNVVEVIGKGLVELIEAGKLHTEKLFNLLKSYIEPML----A 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDH 248
+ D +VL C+HYP ++ V +++ P + +D+ ++A++ R L Q F H
Sbjct: 175 QNIDYLVLGCSHYPYLIPVLKKILPEHIQIIDSGQAVAKQTERVLGANQLLSQVDQFGKH 234
Query: 249 ALFLSGKPDI--AMRRLMQ 265
L+ + +I A+ + +Q
Sbjct: 235 KLYSNASIEILEALTKELQ 253
>gi|262280802|ref|ZP_06058585.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262257702|gb|EEY76437.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 288
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 9/223 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L D L +
Sbjct: 23 IGIFDSGIGGMSVAAEIARYLPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQ 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT R
Sbjct: 82 GCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRG 141
Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+++ + + + ++++ L VE ++ + +K+ ++ +
Sbjct: 142 QLIKDVVEKFAIPAGVKVMTLTNLELVPCVEAGQQMGEVCLNALKEVLQ----PAAEQGA 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLL 234
D +VL CTHYP + L +D+ ++AR+ AR L+
Sbjct: 198 DYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILI 240
>gi|19704496|ref|NP_604058.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|296328142|ref|ZP_06870673.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|22001821|sp|Q8REE6|MURI_FUSNN RecName: Full=Glutamate racemase
gi|19714772|gb|AAL95357.1| Glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|296154654|gb|EFG95440.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 264
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG VL+++ +P +IY D+ FPYG+ + ++L D K
Sbjct: 8 IGIFDSGLGGTTVLKELINSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFVKN 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
L ++ACNTA T D LR F S+ +G + A +K A+ T++ I+++ST T
Sbjct: 68 NCKLVIVACNTASTAAIDYLREKF-SLPIIGIIEAGVKIASKNTKNKNIAVISTKFTAES 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
N S+ ++ ++ + A +E G ++ +KE+ ++ + K D
Sbjct: 127 HGYKNKAKMLDSELNVKEIACIEFAQMIE---TGWDTFDN--RKELLNKYLSEIPKNADT 181
Query: 195 IVLACTHYPLI 205
+VL CTHYPLI
Sbjct: 182 LVLGCTHYPLI 192
>gi|153208641|ref|ZP_01946893.1| glutamate racemase [Coxiella burnetii 'MSU Goat Q177']
gi|165919769|ref|ZP_02219512.1| glutamate racemase [Coxiella burnetii RSA 334]
gi|212218133|ref|YP_002304920.1| glutamate racemase [Coxiella burnetii CbuK_Q154]
gi|120575827|gb|EAX32451.1| glutamate racemase [Coxiella burnetii 'MSU Goat Q177']
gi|165916852|gb|EDR35456.1| glutamate racemase [Coxiella burnetii RSA 334]
gi|212012395|gb|ACJ19775.1| glutamate racemase [Coxiella burnetii CbuK_Q154]
Length = 280
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 10/227 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ +P +IY+ D PYG + R + IL
Sbjct: 7 IGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETV-SRYATQMASILIAQ 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T++
Sbjct: 66 NIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTIQS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE---KEGKR 191
N + + Q I + + + EE C DEI + ++E +
Sbjct: 126 GIYQNTLRALSPQIEITTQTCGLFVALAEE-GC----TNDEIALLVAKKYLEPIINVYHQ 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D ++L CTH+P+++ + ++ ++++ + A + +L + N
Sbjct: 181 CDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNN 227
>gi|167756830|ref|ZP_02428957.1| hypothetical protein CLORAM_02379 [Clostridium ramosum DSM 1402]
gi|237734546|ref|ZP_04565027.1| glutamate racemase [Mollicutes bacterium D7]
gi|167703005|gb|EDS17584.1| hypothetical protein CLORAM_02379 [Clostridium ramosum DSM 1402]
gi|229382366|gb|EEO32457.1| glutamate racemase [Coprobacillus sp. D7]
Length = 264
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 88/199 (44%), Gaps = 23/199 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I DSG+GGL VL++ +MP FIY D + PYG ++ L F D L K
Sbjct: 11 IGFIDSGLGGLSVLKEAIKIMPHEDFIYYGDSLNAPYGTKSVDEIRD-LTFAIVDKLLKL 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ACNTA + +LR +P + +G PAIK A G I +++TP T+++
Sbjct: 70 GIKGLAVACNTATSAAVRQLRIMYPDLTIVGIEPAIKPAVESNHGGEILVMATPMTIKQE 129
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE------- 188
+ L+ Y + I VS L VE + G F+E
Sbjct: 130 KFNRLLDIYKDRAKIIPVSCKGLMEFVEH-------------GNLNGSFLEAYFNETLVP 176
Query: 189 --GKRTDVIVLACTHYPLI 205
T+ IVL CTHYP +
Sbjct: 177 YLNDTTETIVLGCTHYPFL 195
>gi|300691131|ref|YP_003752126.1| glutamate racemase [Ralstonia solanacearum PSI07]
gi|299078191|emb|CBJ50834.1| Glutamate racemase [Ralstonia solanacearum PSI07]
Length = 277
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPQFIAERTLRVCGW 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + L VIACNTA LR+ ++ +G P +K AAA ++S ++ +L+T +
Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLRAQL-AVPVIGVEPGLKPAAATSRSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + ++
Sbjct: 122 TLRSDKFARLLGNVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLQAYLQPMLEA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYP + R+++ + +D ++AR
Sbjct: 178 GADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVAR 215
>gi|254247709|ref|ZP_04941030.1| Glutamate racemase [Burkholderia cenocepacia PC184]
gi|124872485|gb|EAY64201.1| Glutamate racemase [Burkholderia cenocepacia PC184]
Length = 285
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 7/234 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ +
Sbjct: 1 MTNPSHATAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + L + VIACNTA +R S+ +G P IK AAA +++
Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRECL-SIPLVGVEPGIKPAAALSET 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G+ +L+T +TL L+ Y + L +E +++ I
Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTNSPALRALLERYI 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
+ + D +VL CTHYP R L + +D SD+IAR+ AR L
Sbjct: 179 QPMLDDG----ADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVL 228
>gi|189425888|ref|YP_001953065.1| glutamate racemase [Geobacter lovleyi SZ]
gi|189422147|gb|ACD96545.1| glutamate racemase [Geobacter lovleyi SZ]
Length = 275
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY D PYG + + + S L
Sbjct: 4 QAIGIFDSGVGGLTVLRELTKALPQEDTIYFGDTARVPYGTKSPDTVIRYSQEIAS-FLI 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
K L V+ACNTA + LR + P + +G + P K+AA T+SG++ ++ T T+
Sbjct: 63 KRDIKLLVVACNTASAVALPTLRRSLP-VPVVGVIEPGAKRAAEVTRSGVVGVIGTSGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191
R + S I + + EE ++++ + ++E+ +
Sbjct: 122 RSSAYSRAIKRLNPDISVLAKPCPLFVPLAEEGWI-----DNDVTRITARLYLEELREAQ 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYPL+ V ++ V +D+++ AR +L
Sbjct: 177 VDTLVLGCTHYPLLKKVIAEVMGPDVTLVDSAEETARTVATIL 219
>gi|313898081|ref|ZP_07831620.1| glutamate racemase [Clostridium sp. HGF2]
gi|312957109|gb|EFR38738.1| glutamate racemase [Clostridium sp. HGF2]
Length = 259
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 22/248 (8%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I +FDSG+GG+ VL+++R LMP+ ++Y D PYG + KR + +
Sbjct: 4 IDKAIGVFDSGLGGISVLKELRSLMPQEDYLYYGDSSFAPYGVKTKEEITKRCRSICAFF 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + + VIACNTA + ELR+ +P + +G PA+K A + +L+T T
Sbjct: 64 ISQGVKAV-VIACNTATSACVKELRTLYPDLPIVGMEPALKPAVDGRHQQHVLVLATQFT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHL-----VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
L+ L+ + I+ + ++ A R+E+ A + +
Sbjct: 123 LKEKKFEQLMSRFDEDNTIYRQPCPKLVELVEAGRLEDEAA--------VNSALREYLKP 174
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR--------RARCLLPRIN 238
+ +R D IVL CTH+ R L + +D + AR R C P
Sbjct: 175 YDMERMDSIVLGCTHFVFYRSQLRNLIGDHIALVDGNAGTARHVQELLQERGVCRKPSSA 234
Query: 239 THQTRVFD 246
+ R+++
Sbjct: 235 AGEVRIYN 242
>gi|71280369|ref|YP_268000.1| glutamate racemase [Colwellia psychrerythraea 34H]
gi|71146109|gb|AAZ26582.1| glutamate racemase [Colwellia psychrerythraea 34H]
Length = 256
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 10/190 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL + + + +P + IY+AD + PYG + KR+ ++ ++DK
Sbjct: 1 MFDSGVGGLSIAKCITEQLPHENIIYIADSLHAPYGEKSVEFIIKRVNYIAKQLIDKGVK 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA ++LRS S+ +G PAIK AA + S ++IL+T AT
Sbjct: 61 AI-VIACNTATVNAIEQLRSQV-SIPIIGVEPAIKPAAKQSISKKVAILATQATSENQRF 118
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEGKRTDVI 195
+LI + + +H+ L +E+ G + +D + K+ I KEG D +
Sbjct: 119 KDLIDLHHNGAEVHIQPCPGLVEFIEQ---GNQNSDDCNALLKQYINPLI-KEG--IDTL 172
Query: 196 VLACTHYPLI 205
VL CTHYP +
Sbjct: 173 VLGCTHYPFV 182
>gi|94268729|ref|ZP_01291267.1| Glutamate racemase [delta proteobacterium MLMS-1]
gi|93451485|gb|EAT02316.1| Glutamate racemase [delta proteobacterium MLMS-1]
Length = 264
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS----DI 71
I IFDSG+GG+ V + + +P++ IY D PYG+ + +S D
Sbjct: 2 IGIFDSGVGGMTVARAIEQALPDHRLIYFGDLARTPYGSKSAETITA-----YSRQNVDF 56
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + L V+ACN+A ++ LR+++ F PA+++A Y+ G + ++ T AT
Sbjct: 57 LRQQGAKLLVVACNSAASVATAALRASYELPLFEVISPAVREAVHYSSGGRVGVIGTRAT 116
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R L+ C + + +L VEE + + E K + + +
Sbjct: 117 IRSGVYEELLQRQRPACRVFAAACPLLVPLVEEG----WLDKRETKMILRRYLAPLKRHQ 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTHYPL+ + ++ V +D+S ++A
Sbjct: 173 VDTLVLGCTHYPLLKEMIQRRIGRRVRVIDSSAALA 208
>gi|238927873|ref|ZP_04659633.1| glutamate racemase [Selenomonas flueggei ATCC 43531]
gi|238884206|gb|EEQ47844.1| glutamate racemase [Selenomonas flueggei ATCC 43531]
Length = 262
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 13/245 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL R ++P FI+ AD PYG A++ + F ++++
Sbjct: 3 IALFDSGYGGLTVLSHARRVLPSEEFIFYADRDHVPYGTKSVPAVRGFVRTAFRFLIEQQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++ DE+R + + +G PA+K+A + + +TP T+
Sbjct: 63 RADAVVVACNTATSVAVDEMRRLY-DVPIIGMEPAVKKALTRDADHRVLVTATPITVHGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI S C + + ++ ++ E+A + ++ + F I
Sbjct: 122 KLKRLI----SSCDPNGLVDLLALPQLVEFAERQEFVSSAVEAYLRDAFAPYRFADYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDS----IARRARCLLPRINTHQTRVFDDHALF 251
VL CTH+ RQL P V +D ++ +ARR I F
Sbjct: 178 VLGCTHFNYFKDTMRQLLPQNVRLVDGNEGTVEELARRTGLRTQPIGAQTAHC----TFF 233
Query: 252 LSGKP 256
SG+P
Sbjct: 234 ESGRP 238
>gi|51244544|ref|YP_064428.1| glutamate racemase [Desulfotalea psychrophila LSv54]
gi|50875581|emb|CAG35421.1| probable glutamate racemase [Desulfotalea psychrophila LSv54]
Length = 295
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I IFDSG+GGL V K++ L+P IY AD PYG ++ R + +
Sbjct: 20 KAKKPIGIFDSGVGGLSVALKIKELLPREDLIYFADTGFSPYGTKPAELIRSRAKHITAF 79
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ K + V+ACNTA LR+T ++ +G P I+ A ++SG+I +L+T
Sbjct: 80 LIKKGCKAI-VVACNTATANAIAYLRAT-SNIPIIGVEPGIRPAVQQSKSGIIGVLATRQ 137
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE---K 187
TL+ + L + + I + + L VE + +E + IEG ++E +
Sbjct: 138 TLKSSSFQTLKKRFAGKSQIEIQACPRLVELVEAG----NLTGNETTEAIEG-YVEPLLR 192
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
G D IVL CTHY + +++ +D S
Sbjct: 193 AG--ADYIVLGCTHYLFLAPSIKKIISGRAQLIDTS 226
>gi|89095339|ref|ZP_01168257.1| glutamate racemase [Oceanospirillum sp. MED92]
gi|89080414|gb|EAR59668.1| glutamate racemase [Oceanospirillum sp. MED92]
Length = 276
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 4/215 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL ++ L+P IY+ D PYG ++ + + ++ +
Sbjct: 7 IGVFDSGVGGLTVLNAIKDLLPNEDLIYLGDTARVPYGTKSSASVIRYAEQAAAALICRE 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL-R 133
+L VIACNTA + D L+ P +A +G + P + A TQ+ I +++T T+
Sbjct: 67 VKLL-VIACNTASAVAVDHLQKLNPEIAVVGVIEPGADASCAATQNNHIGVIATEGTVNN 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ Y S ++ + + S+ +A E + G ++ E +K+ + D
Sbjct: 126 QAYQSAILKRNPNASVVAQACSLFVALAEEGWHEG-ELVESIVKECLRPLLESDYQTNMD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTH+P++ R + V+ +D++++ A+
Sbjct: 185 TLVLGCTHFPVLKESIRNIVGDNVELVDSAETTAK 219
>gi|253573395|ref|ZP_04850738.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846923|gb|EES74928.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 260
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 11/239 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGGL VL + +P F+Y AD + PYG +K+ + S I+
Sbjct: 3 IAFFDSGIGGLTVLTEAMRKLPNEDFLYFADTLHVPYGTKTLPEVKRYVEESVSLIMQGD 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133
L V+ACNTA + +ELR T+ + +G PA+K A +Q+ + + +T TL
Sbjct: 63 IKAL-VVACNTATSAAIEELRRTY-DIPIVGMEPAVKPAVKRSQAAGKRVLVFATSLTLS 120
Query: 134 RTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ ++L V++ H +V SM L V +Y ++ DEI++ + +
Sbjct: 121 LSKYTDL----VARVDDHKVVDSMPLPELV-QYCEQLQFDRDEIERYFSRKLAGIDLSQY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
IVL CTH+P + +Q+ P ++ +D S R C L + + + F H F
Sbjct: 176 STIVLGCTHFPYYKSILQQILPPHIELIDGSHGTVERL-CSLIGSSANPGQAFKGHIEF 233
>gi|303231315|ref|ZP_07318051.1| glutamate racemase [Veillonella atypica ACS-049-V-Sch6]
gi|302514045|gb|EFL56051.1| glutamate racemase [Veillonella atypica ACS-049-V-Sch6]
Length = 269
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 13/248 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ ++ P +FIY+ D+ P GN + + + ++ L +
Sbjct: 11 IGVFDSGVGGLSVLKVLQEQFPNENFIYIGDNANNPVGNRPTEEITE-IACRIAETLHQV 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNT + DE+RS ++ +G +K A + S I I++T AT+
Sbjct: 70 PVKLMVIACNTFTVVALDEVRSRV-NVPVIGVSQGVKTAIRESNSNTIGIMATVATV--- 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKRT 192
++ IH YV+ H V + E A I+ + +D ++K + +
Sbjct: 126 --NSHIHKYVAMDIDHEV--FVWEQPCPELAGLIEQGHLHDDAVRKAAKEYLAPMLERDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV+VL CTH+P + V ++LS + ++D + + R + + H H+
Sbjct: 182 DVVVLGCTHFPFVSPVLQELSGDRIRYIDPAYETSDLVRRTMDSNHLHNPSTEKGHSTLY 241
Query: 253 SGKPDIAM 260
K DIA+
Sbjct: 242 FTK-DIAL 248
>gi|261415102|ref|YP_003248785.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261371558|gb|ACX74303.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302327044|gb|ADL26245.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 269
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 29/237 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +LQK+R +P+Y ++Y+ D+ PYG+ + + + ++ +
Sbjct: 2 IGVFDSGFGGLTILQKLRHTLPQYDYLYLGDNARAPYGSRSFETIYRYTLQSVRELFHRG 61
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
P L ++ACNTA ++ + L FP LG V P ++ ++++G I I +T
Sbjct: 62 CP-LVILACNTASAKALRSIQQQVLPVEFPDRRVLGIVRPTAEEIGNFSKTGHIGIFATA 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI-KKEIEGC--FIE 186
T+ +SN SYV + +S +V ++AC + + E ++ EG F++
Sbjct: 121 GTV----SSN---SYVLE-----ISHFFPNLKVTQHACPMWVPLVEYGERGTEGARFFVK 168
Query: 187 KE-------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
K+ D ++LACTHYPL+ R P V + D +A + L R
Sbjct: 169 KDVDQLLAADPEIDTVLLACTHYPLLEDEIRAALPPHVRLVVQGDIVADKTLDYLKR 225
>gi|303229117|ref|ZP_07315918.1| glutamate racemase [Veillonella atypica ACS-134-V-Col7a]
gi|302516130|gb|EFL58071.1| glutamate racemase [Veillonella atypica ACS-134-V-Col7a]
Length = 269
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ ++ P +FIY+ D+ P GN + + + ++ L +
Sbjct: 11 IGVFDSGVGGLSVLKVLQEQFPNENFIYIGDNANNPVGNRPTEEITE-IACRIAETLHQV 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNT + DE+RS ++ +G +K A + S I I++T AT+
Sbjct: 70 PVKLMVIACNTFTVVALDEVRSRV-NVPVIGVSQGVKTAIRESNSNTIGIMATVATV--- 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKRT 192
++ IH YV+ H V + E A I+ + +D ++K + +
Sbjct: 126 --NSHIHKYVAMDIDHEV--FVWEQPCPELAGLIEQGHLHDDAVRKAAKEYLAPMLERDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
DV+VL CTH+P + V ++LS + ++D
Sbjct: 182 DVVVLGCTHFPFVSPVLQELSGDRIRYID 210
>gi|304438688|ref|ZP_07398626.1| glutamate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304368337|gb|EFM22024.1| glutamate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 262
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 9/218 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL R ++P FI+ AD PYG A++ + F ++++
Sbjct: 3 IALFDSGYGGLTVLSHARRVLPSEEFIFYADRDHVPYGTKSVPAVRGFVRTAFRFLIEQQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++ DE+R + + +G PA+K+A + + +TP T+
Sbjct: 63 RADAVVVACNTATSVAVDEMRRLY-DVPIIGMEPAVKKALTRDAEHRVLVTATPITVHGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI S C + + ++ ++ E+A + ++ + F I
Sbjct: 122 KLKRLI----SSCDPNGLVDLLALPQLVEFAERQEFVSSAVEAYLRDAFAPYRFADYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDS----IARR 229
VL CTH+ RQL P V +D ++ +ARR
Sbjct: 178 VLGCTHFNYFKDTMRQLLPQNVRLVDGNEGTVEELARR 215
>gi|39998014|ref|NP_953965.1| glutamate racemase [Geobacter sulfurreducens PCA]
gi|39984959|gb|AAR36315.1| glutamate racemase [Geobacter sulfurreducens PCA]
gi|298506955|gb|ADI85678.1| glutamate racemase [Geobacter sulfurreducens KN400]
Length = 272
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 18/250 (7%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ ++P+ IY+ D PYG + R + L
Sbjct: 4 KAIGIFDSGVGGLTVLKEIIKVLPQEDTIYLGDTARVPYGTKSPETV-TRYSLEIASFLV 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
K L V+ACNTA + L P + +G + P ++A A T++G + ++ T T+
Sbjct: 63 KRDIKLLVVACNTASAASLEALTERLP-IPVVGVIEPGARRAVATTRTGKVGVIGTEGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + I + + + + EE ++ + + G + ++G
Sbjct: 122 RSSAYAKAIKRLNPEVEVITRACPLFVPLAEEGWTDNEVARLTARTYLAG--LREQG--V 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR------RARCLLPRINTHQTRVFD 246
D IVL CTHYPL+ V + V +D+++ AR R R LL R + Q
Sbjct: 178 DTIVLGCTHYPLLKRVIGETVGEDVRLVDSAEETARTVADILRGRDLL-RPDGEQ----G 232
Query: 247 DHALFLSGKP 256
+H F++ P
Sbjct: 233 NHHFFVTDVP 242
>gi|170733557|ref|YP_001765504.1| glutamate racemase [Burkholderia cenocepacia MC0-3]
gi|169816799|gb|ACA91382.1| glutamate racemase [Burkholderia cenocepacia MC0-3]
Length = 285
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 7/234 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ +
Sbjct: 1 MTNPSHATAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + L + VIACNTA +R S+ +G P IK AAA + +
Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSAT 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G+ +L+T +TL L+ Y + L +E +++ I
Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTNSPALRALLERYI 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
+ + D +VL CTHYP R L + +D SD+IAR+ AR L
Sbjct: 179 QPMLDDG----ADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVL 228
>gi|107028624|ref|YP_625719.1| glutamate racemase [Burkholderia cenocepacia AU 1054]
gi|116690217|ref|YP_835840.1| glutamate racemase [Burkholderia cenocepacia HI2424]
gi|105897788|gb|ABF80746.1| glutamate racemase [Burkholderia cenocepacia AU 1054]
gi|116648306|gb|ABK08947.1| glutamate racemase [Burkholderia cenocepacia HI2424]
Length = 285
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 7/234 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ +
Sbjct: 1 MTNPSHAIAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + L + VIACNTA +R S+ +G P IK AAA + +
Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSAT 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G+ +L+T +TL L+ Y + L +E +++ I
Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTNSPALRTLLERYI 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
+ + D +VL CTHYP R L + +D SD+IAR+ AR L
Sbjct: 179 QPMLDDG----ADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVL 228
>gi|206889915|ref|YP_002249185.1| glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741853|gb|ACI20910.1| glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 270
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 8/223 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+++ L+P IY+ D PYG + K + S +
Sbjct: 3 EKPVGIFDSGVGGLTVLKEIAKLLPNEELIYLGDTARVPYGIRSAETVIKYSIECASFLF 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K +L V+ACNT+ ++ + L+ P +A +G + P ++ A T++G I I+ T AT
Sbjct: 63 KKGIKIL-VVACNTSSSVSLEVLKEKLP-IAVIGVIEPGVRAALKATKNGKIGIIGTEAT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I S + + + + VEE I E +++ ++ E +
Sbjct: 121 IQSGAYPKKIKSIEPEIEVISKACPLFVPLVEEGILEGSIAELIVERYLK----ELKNSG 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYPL+ ++ + +D+++ I+R + +L
Sbjct: 177 IDTLILGCTHYPLLKKTIQKYMEG-IQLVDSAEEISREVKEML 218
>gi|225619324|ref|YP_002720550.1| glutamate racemase [Brachyspira hyodysenteriae WA1]
gi|225214143|gb|ACN82877.1| glutamate racemase [Brachyspira hyodysenteriae WA1]
Length = 279
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+K+ +MP +++Y+ D+ PYG+ + L +D L +
Sbjct: 12 IAVFDSGLGGLTVLKKLIEMMPNENYVYIGDNANIPYGDKSKEEI-INLTLKMTDFLVEQ 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ + +IACNT D L+ + A+ A T++ ISI++T T+
Sbjct: 71 KCKMIIIACNTITACSYDILKQKYHIPVIEVISNAVIDALDKTKNNNISIMATEFTVNSN 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
N I + Q + + L +E Y+ E + EI ++E K +D
Sbjct: 131 IYKNKIIEFNKQAKVTQTACKDLCPMIENDWYSY-------ENRLEILKNYLENIDKNSD 183
Query: 194 VIVLACTHYPLIVHVFRQL 212
++L CTHYP I++ ++L
Sbjct: 184 TLILGCTHYPHIINDIKKL 202
>gi|16079734|ref|NP_390558.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221310614|ref|ZP_03592461.1| hypothetical protein Bsubs1_14656 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314937|ref|ZP_03596742.1| hypothetical protein BsubsN3_14572 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319859|ref|ZP_03601153.1| hypothetical protein BsubsJ_14488 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324139|ref|ZP_03605433.1| hypothetical protein BsubsS_14627 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|11387238|sp|O05412|MURI2_BACSU RecName: Full=Glutamate racemase 2
gi|1934638|gb|AAB80890.1| YrpC [Bacillus subtilis subsp. subtilis str. 168]
gi|2635126|emb|CAB14622.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
Length = 265
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 8/225 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ +F ++ L
Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKE-YIFNAAEFLASQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTPATLR 133
VIACNTA ++ ++LR F +G PA+K A + + +++T TL+
Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NL+ H LV + L VE +A ED+I K ++ + K+
Sbjct: 121 EEKFHNLVKEI---DHHDLVDCLALPGLVE-FAENFDFSEDKIIKYLKNELSSFDLKQYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
IVL CTH+P + F +L VD + S A++ + +L N
Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRN 221
>gi|270157815|ref|ZP_06186472.1| glutamate racemase [Legionella longbeachae D-4968]
gi|269989840|gb|EEZ96094.1| glutamate racemase [Legionella longbeachae D-4968]
Length = 271
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 8/216 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I +FDSG+GGL VL+ +R +P+ F+Y+ D PYG +K+ M + ++
Sbjct: 5 QLAIGVFDSGMGGLTVLRALREGLPQESFVYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPAT 131
++ L VIACNTA T L+S P M L P A A T++ + +L+T T
Sbjct: 65 ERRIKAL-VIACNTATTAALPYLQSMLPDMPVLGVVAPGAAAAVAATKNNQVIVLATETT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ LI + + I+ + +L + EE ++ + +K ++G E
Sbjct: 124 IASNAYQQLIAQQLPRAVINTRACSVLVALAEEGMVNNQVAREALKYYLDGFTHE----- 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D ++L CTH+P+ + + P V +D++ + A
Sbjct: 179 -DTVLLGCTHFPVFKSLLISILPEGVSIVDSAHATA 213
>gi|294782801|ref|ZP_06748127.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
gi|294481442|gb|EFG29217.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
Length = 264
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 25/200 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++L D K
Sbjct: 8 IGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILDFFVKN 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST T
Sbjct: 68 NCKLVIVACNTASTAAIDYLRERFP-LPILGIVEAGIKIARKNTKTKNIAVISTKFTAES 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC---------GIKIKEDEIKKEIEGCFI 185
H Y ++ ++ + ++ V+E AC G + ++ ++E+ ++
Sbjct: 127 -------HGYKNKA--KMIDTELI---VKEIACIEFPMMIETGWETFDN--REELLNKYL 172
Query: 186 EKEGKRTDVIVLACTHYPLI 205
+ K D +VL CTHYPLI
Sbjct: 173 AEIPKNVDTLVLGCTHYPLI 192
>gi|332977227|gb|EGK14022.1| glutamate racemase [Psychrobacter sp. 1501(2011)]
Length = 352
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 14/226 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +R +P H++Y AD + PYG A K L + D L
Sbjct: 21 IGIFDSGVGGLSVYLHLRQQLPNEHYLYYADTLNVPYGP-RSSAEIKVLSLIAVDWLVAA 79
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACN+A R P + +G VPA+K A + S +++L+T ATL
Sbjct: 80 GCKLIVIACNSASAHALPHARQKHPHIPIVGLVPALKPAVLNSNSKNVAVLATKATLDGE 139
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ +I Y +++ V + V G+ + + E + ++ +R D +
Sbjct: 140 LLNTVISDYALPANVN-VMKWFDPNLVPWVEAGMPL-DSETPERLKCQLKRFAEQRVDHL 197
Query: 196 VLACTHYPLIVHVFRQLSPWPVDW-------LDNSDSIARRARCLL 234
VL CTHYP FR+ V+ +D+ +IA R + LL
Sbjct: 198 VLGCTHYPF----FREFVLAEVESENLGIKVVDSGAAIAARVKALL 239
>gi|321312180|ref|YP_004204467.1| glutamate racemase [Bacillus subtilis BSn5]
gi|320018454|gb|ADV93440.1| glutamate racemase [Bacillus subtilis BSn5]
Length = 265
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 8/225 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ +F ++ L
Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKE-YIFNAAEFLASQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTPATLR 133
VIACNTA ++ ++LR F +G PA+K A + + +++T TL+
Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NL+ H LV + L VE +A ED+I K ++ + K+
Sbjct: 121 EEKFHNLVKEI---DHHDLVDCLALPGLVE-FAENFDFSEDKIIKYLKNELSSFDLKQYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
IVL CTH+P + F +L VD + S A++ + +L N
Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRN 221
>gi|291485080|dbj|BAI86155.1| putative glutamate racemase [Bacillus subtilis subsp. natto
BEST195]
Length = 265
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 8/225 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ +F ++ L
Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGRVKE-YIFNAAEFLASQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTPATLR 133
VIACNTA ++ ++LR F +G PA+K A + + +++T TL+
Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NL+ H LV + L VE +A ED+I K ++ + K+
Sbjct: 121 EEKFHNLVKEI---DHHDLVDCLALPGLVE-FAENFDFSEDKIIKYLKNELSSFDLKQYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
IVL CTH+P + F +L VD + S A++ + +L N
Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRN 221
>gi|206560649|ref|YP_002231414.1| glutamate racemase [Burkholderia cenocepacia J2315]
gi|198036691|emb|CAR52590.1| putative glutamate racemase [Burkholderia cenocepacia J2315]
Length = 285
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + +R + + + L +
Sbjct: 16 VGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFITERTLAI-GEWLARE 74
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA +R S+ +G P IK AAA + +G+ +L+T +TL
Sbjct: 75 GAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSATGVAGVLATQSTLNSP 133
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ Y + L +E +++ I+ + D +
Sbjct: 134 RFQALLDRYGAGRRFICQPGHGLVEAIERGDTNSPALRALLERYIQPMLDDG----ADTL 189
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
VL CTHYP R L + +D SD+IAR+ AR L
Sbjct: 190 VLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVL 228
>gi|297587459|ref|ZP_06946103.1| possible glutamate racemase [Finegoldia magna ATCC 53516]
gi|297574148|gb|EFH92868.1| possible glutamate racemase [Finegoldia magna ATCC 53516]
Length = 261
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 19/226 (8%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++K N I DSG+GGL V +K++ LMP+ +IY AD PYG+ + +++ +
Sbjct: 4 KQKPYNKIGFVDSGLGGLTVFKKVKKLMPDKEYIYFADSANVPYGS----KTRDQMLMIS 59
Query: 69 SDIL---DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLIS 124
+I+ ++ Q L V+ACNT ++ D ++S + +G V +K A T + +
Sbjct: 60 ENIVRFFNEQQIDLLVVACNTLTSIALDYMKS-IANFDIIGVVEYGVKSAIKTTSNKKVG 118
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIEG 182
+++T AT+ + L + Q + + S S VEE C K D+I +++E
Sbjct: 119 VIATKATVD----NGLYKKLLEQQGVEVCQSACFDFVSFVEE-DCKDK---DKILEKVEE 170
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D I+L CTHYP+++ +Q + + ++D +DS++
Sbjct: 171 YLKPIVDFGADTIILGCTHYPILIEYLKQYTGENITFVDPADSLSE 216
>gi|47776279|dbj|BAD20743.1| glutamate racemase [Bacillus subtilis]
Length = 265
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 8/225 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ +F ++ L
Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGRVKE-YIFNAAEFLASQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTPATLR 133
VIACNTA ++ ++LR F +G PA+K A + + +++T TL+
Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NL+ H LV + L VE +A ED+I K ++ + K+
Sbjct: 121 EEKFHNLVKEI---DHHDLVDCLALPGLVE-FAENFDFSEDKIIKYLKNELSSFDLKQYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
IVL CTH+P + F +L VD + S A++ + +L N
Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRN 221
>gi|261408244|ref|YP_003244485.1| glutamate racemase [Paenibacillus sp. Y412MC10]
gi|261284707|gb|ACX66678.1| glutamate racemase [Paenibacillus sp. Y412MC10]
Length = 258
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GGL VL +P F+++AD + PYG +K + I+ +
Sbjct: 3 IAFFDSGLGGLTVLTAAMKKLPHEDFLFLADTLHVPYGTKAKEDVKAYIHQAMETIMQEE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133
+ V+ACNTA ++ +LR +P + +G PA+K A ++ I +L+TP TL+
Sbjct: 63 VKAI-VVACNTATSMAISDLRKAYP-IPVIGMEPAVKPAVEINRASGKRILVLATPLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +L+ S +H+V S L VE C + EI + K+ + D
Sbjct: 121 ESKYKDLVRRVDS---MHIVDSQPLPELVEH--C----EALNFDPEIMNAYFTKKFEAFD 171
Query: 194 V-----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ IVL CTHYP + L P + +D S+ R
Sbjct: 172 LNEYGTIVLGCTHYPFYKRILSDLLPDHIRIIDGSEGTVNR 212
>gi|317124440|ref|YP_004098552.1| glutamate racemase [Intrasporangium calvum DSM 43043]
gi|315588528|gb|ADU47825.1| glutamate racemase [Intrasporangium calvum DSM 43043]
Length = 286
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D P + + DSGIG L +R L P+ + D PYG +++
Sbjct: 7 DLAPMTTRPPRRVAFVDSGIGLLGYADALRALRPDLELVLALDPDHMPYGPRSPGEVRE- 65
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGL 122
L+ + + +PV V+ACNTA + LR+ P + +G VPAI+ AA T G
Sbjct: 66 LILASAAAAAELEPVALVVACNTASVHGLEALRAELEPGLPVIGTVPAIRPAA--TTGGP 123
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+SI ST AT Y L+ ++ S+ H ++++ LA VE + EI + I
Sbjct: 124 VSIWSTAATSSSDYLRGLVDAFASEVETHSIAALGLAEAVE------AVDPAEIDRAIGA 177
Query: 183 CFIEKEGKRTDVIVLACTHYPLIV 206
E T +VL CTHY L+
Sbjct: 178 ALAETPAD-TRALVLGCTHYGLVA 200
>gi|193214141|ref|YP_001995340.1| glutamate racemase [Chloroherpeton thalassium ATCC 35110]
gi|193087618|gb|ACF12893.1| glutamate racemase [Chloroherpeton thalassium ATCC 35110]
Length = 278
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 6/225 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I IFDSGIGGL V++K+R +P IY D PYG + +R +
Sbjct: 13 KAERPIGIFDSGIGGLTVVRKIRERLPNERLIYFGDTARVPYGT-KSQVTVRRYAAEDTR 71
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129
+L KYQP + V+ACNT L D + + LG + A A Y+Q+ I ++ T
Sbjct: 72 LLLKYQPKMIVVACNTVSALALDVVEHESGGLPVLGVLKAGANLAVKYSQTKHIGVIGTI 131
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ I + ++ + + EE G I K E
Sbjct: 132 ATISSNAYPLEISKLDCEAEVYSKACPLFVPLAEE---GF-ISHQATKLIATEYLTELLV 187
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
K+ D +VL CTHYP++ + +++ V +D+++++A LL
Sbjct: 188 KKIDSLVLGCTHYPILKSMLAEVTGKNVVIIDSAEAVAMEVENLL 232
>gi|329922868|ref|ZP_08278384.1| glutamate racemase [Paenibacillus sp. HGF5]
gi|328941641|gb|EGG37926.1| glutamate racemase [Paenibacillus sp. HGF5]
Length = 258
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GGL VL +P F+++AD + PYG +K + I+ +
Sbjct: 3 IAFFDSGLGGLTVLTAAMKKLPHEDFLFLADTLHVPYGTKAKEDVKAYIHQAMGIIMQEE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133
+ V+ACNTA ++ +LR +P + +G PA+K A ++ I +L+TP TL+
Sbjct: 63 VKAI-VVACNTATSMAISDLRKAYP-IPVIGMEPAVKPAVEINRASGKRILVLATPLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +L+ S +H+V S+ L VE C + EI + K+ + D
Sbjct: 121 ESKYKDLVRRVDS---MHIVDSLPLPELVEH--C----EALNFDPEIMNAYFTKKFEAFD 171
Query: 194 V-----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ IVL CTHYP + L P + +D S+ R
Sbjct: 172 LNEYGTIVLGCTHYPFYKRILSDLLPDHIRIIDGSEGTVNR 212
>gi|158321093|ref|YP_001513600.1| glutamate racemase [Alkaliphilus oremlandii OhILAs]
gi|158141292|gb|ABW19604.1| glutamate racemase [Alkaliphilus oremlandii OhILAs]
Length = 274
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 9/230 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL + +P +IY D PYG +KK L F D L +
Sbjct: 10 IGVFDSGVGGISVLADLIHQLPNEQYIYFGDSGNAPYGVRSKEEVKK-LSFNVVDKLLNF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA +++ +ELR + +G PA+K A G I +++TP TLR
Sbjct: 69 NIKAVVVACNTATSIVIEELRKRL-DIPVIGMEPALKPAIELNNFGKIVVMATPVTLREK 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
++LI + + L +E+ + EI+ I + + +
Sbjct: 128 KFNDLIMKLTDTDRVVKMPCPGLVEIIEQQGD----HDAEIEAYIRRIYASYQLDTVGTV 183
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQT 242
VL CTHY I + ++ +D + AR + LL + +NT T
Sbjct: 184 VLGCTHYVFIKDMIAKVVGPEATVIDGNFGTARHVKELLKQSEALNTDGT 233
>gi|260435366|ref|ZP_05789336.1| glutamate racemase [Synechococcus sp. WH 8109]
gi|260413240|gb|EEX06536.1| glutamate racemase [Synechococcus sp. WH 8109]
Length = 265
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSG+GGL VL+++ +Y+ D PYGN + ++ R+ L Q
Sbjct: 9 FDSGLGGLTVLRRVLERHGPVPCVYLGDTARVPYGNRQPDDIR-RIAAEVVGWLRNQQVS 67
Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L +D E ++ P + +GA AAA ++ + +L+TPAT+
Sbjct: 68 TVVMACNTTNALARDVAEGQAGVPLIGLIGA------AAAMVETRRVGVLATPATV---- 117
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCFIEKE 188
S + + ++ S V E AC ++ D++++ +
Sbjct: 118 --------ASSAYRASIEALHPGSVVIEQACPAFVPLIEAGEMNSDDLRRAAQAYLEPLL 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D IVL CTHYPL+V + RQL P V +D + +AR+ +L
Sbjct: 170 AASVDSIVLGCTHYPLLVPLLRQLVPESVQIIDPAIGVARQLDAIL 215
>gi|88801356|ref|ZP_01116884.1| glutamate racemase [Polaribacter irgensii 23-P]
gi|88782014|gb|EAR13191.1| glutamate racemase [Polaribacter irgensii 23-P]
Length = 266
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 17/258 (6%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF---SDILDKY 75
FDSGIGG V +++ L+P + IY++D PYG E A ++ L +D L K
Sbjct: 11 FDSGIGGTSVWKEVIKLLPNENTIYLSDSENAPYG--EKSA--DEIILLSRKNTDFLLKE 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L ++ACNTA T LR + ++ F+G PAIK A+ T++ I +L+T TL
Sbjct: 67 NCKLIIVACNTATTNAITFLRDAY-AIPFIGIEPAIKPASLITKTNKIGVLATQGTLNSA 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ I + L + +E ++ +E + + D +
Sbjct: 126 LFEKTSLPIRNTIQIQETNGKGLVTLIENG----QLNSEETRALLTVYLAPMLANNIDSL 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDDHALFL 252
VL CTHYP ++ R++ V +D+ +++A++ + +L + +N+ Q +H L++
Sbjct: 182 VLGCTHYPYLIPQIREIIGPDVQIIDSGEAVAKQTKAILLKHKILNSDQKHTA-NHKLYI 240
Query: 253 SGKPDIAMRRLMQGFGLK 270
+ K A+ +L++ +K
Sbjct: 241 N-KDKKALEKLIEDSPVK 257
>gi|260221040|emb|CBA29208.1| hypothetical protein Csp_A10990 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 147
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 11 KLQN-SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL N I +FDSG+GGL VL+ +R +P F+YVAD PYG +D L +R +
Sbjct: 3 KLSNCPIGVFDSGVGGLSVLRALRAELPHEKFVYVADSGHAPYGERDDDYLIERSHTIVR 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D++Q V+ACNTA LR P + +G PA+K A +++ +I +++T
Sbjct: 63 WFRDRHQIKALVVACNTATAAAIHVLREAHPELPIIGIEPALKPAVVQSKTKVIGVMATR 122
Query: 130 ATLRRTYTSNLIHSYVSQC 148
+TL L+ S +Q
Sbjct: 123 STLNSEKFKRLLTSLENQA 141
>gi|149924170|ref|ZP_01912547.1| glutamate racemase [Plesiocystis pacifica SIR-1]
gi|149814971|gb|EDM74531.1| glutamate racemase [Plesiocystis pacifica SIR-1]
Length = 276
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 2/213 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P FIY+ D PYG + R + +L +
Sbjct: 10 IGVFDSGVGGLTVLRALRRRLPNERFIYLGDTARLPYGTKSPETV-ARYAEKAAGVLVER 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNTA + L F + +G + P A A T+S + ++ T T+
Sbjct: 69 GIKLLVIACNTASAVAVSRLAERFAPVPVIGVIEPGAWAACAATRSDRVLVIGTEGTING 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I + V+ + + EE I E ++ + E +R D
Sbjct: 129 GAYQRAIARRRPAIVVRSVACPLFVALAEEGWVRGPIPEAIARRYLAVELSGNEDERVDT 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+VL CTH+P++ V +++ V +D++++ A
Sbjct: 189 LVLGCTHFPVLRGVLQEVCGPEVSLVDSAETTA 221
>gi|317404652|gb|EFV85049.1| glutamate racemase [Achromobacter xylosoxidans C54]
Length = 236
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 15/223 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I ++DSG+GGL VL+ +R +P H +YVAD PYG +++R + + +D L
Sbjct: 5 HPIGVYDSGVGGLSVLRAIREALPHEHLLYVADSAHVPYGEKTQQYVQQRALAI-ADYLV 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA LR+ P +A +G PAIK AA T+SG++ + +T TL
Sbjct: 64 SRRANAMVVACNTATAAAIAALRARHPDLAIIGVEPAIKPAAHLTRSGVVGVFATTGTLA 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-----EKE 188
+ L+ + IL E+ ++++ EI+ E + E
Sbjct: 124 SPKFAALVQREAPEIR-------ILFRPCPEWV--LQVERGEIQGEAAARVVAAPVHELL 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ D +VL CTH+P + + + V L+ +ARR R
Sbjct: 175 AQGADALVLGCTHFPFLHDAIQAAAGPAVPLLETGGPVARRLR 217
>gi|145220321|ref|YP_001131030.1| glutamate racemase [Prosthecochloris vibrioformis DSM 265]
gi|145206485|gb|ABP37528.1| glutamate racemase [Chlorobium phaeovibrioides DSM 265]
Length = 271
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 10/213 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q+ I IFDSG+GGL VL+ M+ L+P +Y D PYG + +R + IL
Sbjct: 8 QSPIGIFDSGVGGLTVLKAMQKLLPSEQLLYFGDTARVPYGT-KSQVTIRRYAEEDTRIL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++QP + ++ACNT L D + T + LG + A A T++G I ++ T AT
Sbjct: 67 LRHQPKMIIVACNTVSALALDVVEKTADPLPVLGVLEAGADTAVEVTRTGRIGVIGTQAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEG 189
+ + I+ + + + + EE G+ E I +E + +E
Sbjct: 127 ISSNAYAYAINQASADSEVFSTACPLFVPLAEE---GMLNNEATRLIAREYLAPLLAEE- 182
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
D +VL CTHYP++ + + + V +D+
Sbjct: 183 --IDTLVLGCTHYPILRTIIEETAGTGVTIIDS 213
>gi|302672271|ref|YP_003832231.1| glutamate racemase MurI [Butyrivibrio proteoclasticus B316]
gi|302396744|gb|ADL35649.1| glutamate racemase MurI [Butyrivibrio proteoclasticus B316]
Length = 272
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 9/242 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSGIGGL VL + +P +I+ AD PYG + + + ++DK
Sbjct: 2 KIGIFDSGIGGLSVLHEAYHRLPGQEYIFYADTDHVPYGTKTPEQIVEFAIDNAQFLIDK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA ++ ELRS F + LG PA+K A T I +++TP T+R
Sbjct: 62 GAEAL-VVACNTATSVAIKELRSRF-DIPILGMEPAVKPAVEGTDDKRIMVIATPVTIRE 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+L+H + + L++ R+ E+A + +E+ I G F +
Sbjct: 120 DKLKDLLHRVDEEHRVDLLA----MPRLVEFAEKEQFDTEEVVGYIRGRFANFDPTDYCA 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLD-NSDSIARRARCLLPRINTHQ-TRV-FDDHALF 251
+VL CTH+ V +D N ++ A L +N+ Q T V FDD+
Sbjct: 176 LVLGCTHFNYFKPVLEDFFGKDTLLVDGNYGTVHHLADVLGLEMNSDQDTEVYFDDYHKM 235
Query: 252 LS 253
L
Sbjct: 236 LD 237
>gi|282891233|ref|ZP_06299736.1| hypothetical protein pah_c048o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498926|gb|EFB41242.1| hypothetical protein pah_c048o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 280
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 11/224 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD--I 71
N I +FDSGIGGL V++ + L+P +Y D FPYGN +A + + + ++
Sbjct: 11 NPIGMFDSGIGGLTVMRAVMQLLPYESVLYFGDTAHFPYGN---NAAETIIQYSLANAHF 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + L VIACNTA L+ F P+I+ A A TQSG I++L T T
Sbjct: 68 LMEQDIKLLVIACNTASAFAFSTLQDQFLIPIIDVISPSIEAAIAQTQSGSIAVLGTKGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R I + Q + ++ +LA VEE + E + I +++ K
Sbjct: 128 IRSGVYKQKILDLMPQARVVSLACPLLAPLVEE-----QWLEHPATRLIVQEYLQPLKKS 182
Query: 192 -TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYPL+ + + V +D++ + A + +L
Sbjct: 183 DVDTLILGCTHYPLLKSLIEEEMEGQVKIIDSASACALKVEEIL 226
>gi|239827939|ref|YP_002950563.1| glutamate racemase [Geobacillus sp. WCH70]
gi|259509915|sp|C5D5M9|MURI_GEOSW RecName: Full=Glutamate racemase
gi|239808232|gb|ACS25297.1| glutamate racemase [Geobacillus sp. WCH70]
Length = 264
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 24/267 (8%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ +Y+ D PYG +++ + ++
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKERIVYLGDTARCPYGPRPKEEIRQ-FTWEMTNY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + VIACNTA ++ DE+R + LG V P + A T++G I ++ T
Sbjct: 60 LLRYNIKMLVIACNTATAVVLDEIREQL-DIPVLGVVHPGARAALKATKNGHIGVIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEG 182
T++ S + + S+ RVE AC + +E +K +
Sbjct: 119 TVK------------SGAYEKALKSINHRVRVESLACPKFVPLVESGNFEGEEARKIVAE 166
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ DV++L CTHYPL+ + ++ V + + D AR +L + T
Sbjct: 167 SLEPFKSSNMDVLILGCTHYPLLSPLIKEYMGKRVKLICSGDETAREVSAILHHSHLLYT 226
Query: 243 RVFD-DHALFLSGKPDIAMRRLMQGFG 268
+ +H F +G ++ + + FG
Sbjct: 227 GQREAEHLFFTTGSKELFQKIASKWFG 253
>gi|78357785|ref|YP_389234.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220190|gb|ABB39539.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 285
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 7/233 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M+I++ C+ + I +FDSG+GGL VL+ +R MP +Y+ D PYG +
Sbjct: 1 MQIESG-CDSRRDLPIGMFDSGVGGLTVLKALRRRMPCESILYLGDTARLPYGTKSAETV 59
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + + ++++ +L V+ACNT + LR+ +P + +G V P + + +
Sbjct: 60 TRYALQASARLVERDIKLL-VVACNTVSATALEPLRNAYPGIPVIGVVQPGAQASCRASA 118
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+G I++++T +T+R IH+ + EE + E +
Sbjct: 119 TGRIAVIATESTIRGRAYERAIHAIRPDAQTTGAPCPLFVPLAEEGWLDGPLVEGIAARY 178
Query: 180 IEGCFIEKEG----KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ F G + D +VL CTH+PL+ R + V +D++ A+
Sbjct: 179 LNPIFHPASGSGRPETPDCLVLGCTHFPLLAGAIRNVIGDGVTIVDSAAITAK 231
>gi|313123221|ref|YP_004033480.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312279784|gb|ADQ60503.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 261
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL ++ LMP +++ D PYG E + L KR++ +++
Sbjct: 10 IGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKKEVYQLAKRVV---DELI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL
Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + V + L +E+ + I + +E GK
Sbjct: 126 EQDKFNQLVAECAEPGQVLKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYVGKAA 181
Query: 193 DVIVLACTHYPLIVHVFRQL 212
V VL CTH+P +++
Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200
>gi|104773633|ref|YP_618613.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|103422714|emb|CAI97341.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
Length = 261
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL ++ LMP +++ D PYG E + L KR++ +++
Sbjct: 10 IGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVV---DELI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL
Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + V + L +E+ + I + +E GK
Sbjct: 126 EQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYVGKAA 181
Query: 193 DVIVLACTHYPLIVHVFRQL 212
V VL CTH+P +++
Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200
>gi|93007073|ref|YP_581510.1| glutamate racemase [Psychrobacter cryohalolentis K5]
gi|92394751|gb|ABE76026.1| glutamate racemase [Psychrobacter cryohalolentis K5]
Length = 333
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 14/226 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL V + +P +IY AD + PYGN + +K F + + Y
Sbjct: 50 IGLFDSGIGGLSVYLHLAQQLPNERYIYYADTLNVPYGNRDSDDIK---TFTLTAVEWLY 106
Query: 76 QP--VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Q L VIACN+A R +P + +G VPA+K A ++SG +++L+T ATL
Sbjct: 107 QQGCKLIVIACNSASAYALQTARCHYPQLPIVGLVPALKPAVLASKSGHVAVLATKATLN 166
Query: 134 RTYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+++I + S + L VE ++++++ K+G
Sbjct: 167 GKLLNDVIATIASPSATRVTKYFDPQLVPWVESGMPENSETAQNLRQQLQ--VFAKDG-- 222
Query: 192 TDVIVLACTHYPLIVHVFRQL---SPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYP Q + +D+ +IA R + LL
Sbjct: 223 VDQLVLGCTHYPFFKDFVMQAIESQRLSMQVVDSGQAIAERVKQLL 268
>gi|303256754|ref|ZP_07342768.1| glutamate racemase [Burkholderiales bacterium 1_1_47]
gi|330999103|ref|ZP_08322824.1| glutamate racemase [Parasutterella excrementihominis YIT 11859]
gi|302860245|gb|EFL83322.1| glutamate racemase [Burkholderiales bacterium 1_1_47]
gi|329575492|gb|EGG57031.1| glutamate racemase [Parasutterella excrementihominis YIT 11859]
Length = 265
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 7/238 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V+ +R +P IY D + PYG+ +K+R + + ++ K
Sbjct: 1 MFDSGLGGLSVMHAVRDALPGEDIIYYGDCLYAPYGDRNSEYIKERCLAIGRFLISKGAK 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V++CNTA + +R TF + +G PAIK AAA T++G++ +++T T+
Sbjct: 61 AI-VVSCNTATAEGVNTMRDTF-DIPIIGIEPAIKPAAAATKTGVVGVIATTRTITSERY 118
Query: 138 SNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
L+ + ++ + V L VE + I+K + I++ G D +V
Sbjct: 119 LRLVREFAGTKVKVVSVPCPGLMECVESGDWDSFKTQKLIEKYLHP--IKRAG--ADKLV 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
L CTHYP + +V ++ + +D S ++AR + L + ++SG
Sbjct: 175 LGCTHYPFLSNVLKRELGSGTELIDPSAAVARELKHQLSKRGLLSDGAKGKEVFYISG 232
>gi|315925652|ref|ZP_07921862.1| glutamate racemase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315621193|gb|EFV01164.1| glutamate racemase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 258
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 13/228 (5%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I +FDSG+GG+ VL+ + +P +F++ D PYG ++ +
Sbjct: 3 KAFNDYIGVFDSGVGGISVLKHLTEQLPNENFLFYGDSANAPYGEKSVEQVRALAFDIVR 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+++ + VIACNTA + ELR F + +G PA+K AA + + +++TP
Sbjct: 63 RMVEDGVKAI-VIACNTATSAAAKELRCAF-ELPIIGVEPALKPAATASGRHRVLVMATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE---GCFIE 186
TL +L Y S LA R+E ++ ++ IE GC+
Sbjct: 121 VTLSLQKYRDLWDRYAGYAECVSCSCPGLAKRIERG----RLDAPDLTALIEKLIGCYR- 175
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
R D +VL CTHYP + R + V D A + +L
Sbjct: 176 ---GRVDSVVLGCTHYPFVSDQIRGVLGSHVTLYDGGAGTAGELKNVL 220
>gi|301166907|emb|CBW26486.1| putative glutamate racemase [Bacteriovorax marinus SJ]
Length = 256
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI IFDSGIGG +L+K+ L PE Y+AD PYGN + R +L +++ K
Sbjct: 8 SIGIFDSGIGGFSILKKIHELAPELEVYYIADQGFAPYGNKSRKEVIDRCHYLCHELM-K 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+ L V+ACNTA + DELR+TF ++ F+G P + + +T +S +++T
Sbjct: 67 FDLDLIVVACNTATGVAIDELRNTF-TIPFVGVEPFVNALSKHTWKESDRACVITTELMS 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L++ + + LA+ VE++ +E +K + E F+ +
Sbjct: 126 KSERFQKLVNRLDPDKRLFYKVTPGLATIVEDFFINKNEEELNLKLKEELSFVGESSYSH 185
Query: 193 DVIVLACTHYPLI 205
++L CTHYPLI
Sbjct: 186 --LILGCTHYPLI 196
>gi|325684586|gb|EGD26745.1| glutamate racemase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 261
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL ++ LMP +++ D PYG E + L KR++ +++
Sbjct: 10 IGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVV---DELI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL
Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + V + L +E+ + I + +E GK
Sbjct: 126 EQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYVGKAA 181
Query: 193 DVIVLACTHYPLIVHVFRQL 212
V VL CTH+P +++
Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200
>gi|260887883|ref|ZP_05899146.1| glutamate racemase [Selenomonas sputigena ATCC 35185]
gi|260862389|gb|EEX76889.1| glutamate racemase [Selenomonas sputigena ATCC 35185]
Length = 281
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 5/218 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GG+ VL+++ L+P+ FIY D PYG + ++ L D
Sbjct: 27 KKEQPIGVFDSGLGGISVLRELVSLLPKEDFIYFGDAAHAPYGERTEREIRA-LTTAQID 85
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ V+ACNTA + LR + + +G PA+K A + + +++T A
Sbjct: 86 RMAAEGVKAVVLACNTATSAACAPLRRRYRQIPIIGMEPALKPAILSGEKPRVVVMATHA 145
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR+ + L+ + I + + VE +I+ + + +E F+ K
Sbjct: 146 TLRQKKFARLMERFKDAGEIVKLPCPEIVEFVERG----EIRSAALHEYLEERFLSVSQK 201
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTH+P + + + V D + AR
Sbjct: 202 PIDCVVLGCTHFPFVRDAIQDVVGQAVQIFDGAAGTAR 239
>gi|116513625|ref|YP_812531.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116092940|gb|ABJ58093.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
Length = 261
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL ++ LMP +++ D PYG E + L KR++ +++
Sbjct: 10 IGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVV---DELI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL
Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + V + L +E+ + I + +E GK
Sbjct: 126 EQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYVGKAA 181
Query: 193 DVIVLACTHYPLIVHVFRQL 212
V VL CTH+P +++
Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200
>gi|148652096|ref|YP_001279189.1| glutamate racemase [Psychrobacter sp. PRwf-1]
gi|148571180|gb|ABQ93239.1| glutamate racemase [Psychrobacter sp. PRwf-1]
Length = 340
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V ++ +P+ HFIY AD + PYG + ++L D L
Sbjct: 37 IGIFDSGVGGLSVYMHLKQALPQEHFIYYADTLNVPYGPRPSSEI-QQLSLTAVDWLVAA 95
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACN+A R +P + +G VPA+K A + S +++L+T ATL
Sbjct: 96 GCKLVVIACNSASAHALHLARQKYPHIPIVGLVPALKPAVLNSTSKNVAVLATKATLDGP 155
Query: 136 YTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +I Y + ++ L VE G+ + D + ++ + ++ D
Sbjct: 156 LLNTVIDEYARPSQVTVIKWFDPELVPWVE---AGMPMDSDTPMR-LKQQLYQFAQQQVD 211
Query: 194 VIVLACTHYPLIVH-VFRQLSPWPVDW--LDNSDSIARRARCLL 234
+VL CTHYP V +++ +D +D+ +IA R + LL
Sbjct: 212 HLVLGCTHYPFFREFVLAEVAKQGLDIKVVDSGAAIAARVKALL 255
>gi|319953665|ref|YP_004164932.1| glutamate racemase [Cellulophaga algicola DSM 14237]
gi|319422325|gb|ADV49434.1| Glutamate racemase [Cellulophaga algicola DSM 14237]
Length = 259
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 8/243 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE-DHALKKRLMFLFSDILDK 74
I IFDSG+GG + +++ L+P IY+AD PYG D L L ++ L
Sbjct: 6 IGIFDSGVGGTSIWKEIHKLLPNEDTIYLADSKNAPYGEKSADEIL--NLSIKNTEFLLN 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA T LR T+ + F+G PAIK AA ++S I +L+T TL
Sbjct: 64 LGCKIIVIACNTATTNAIAYLRKTY-DIPFIGIEPAIKPAALNSKSKTIGVLATKGTLTS 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ +Y + L +E K+ E++ + + D
Sbjct: 123 ALFNTTSKNYSEGITVIDQDGEGLVPLIESG----KVNGVEVRNLLLKYLNPMIHQGIDY 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYP ++ V +++ V +D+ +++A+ + +L + + H + +
Sbjct: 179 LVLGCTHYPYLIPVIQEIVSDKVTIIDSGEAVAKHTKSILEKFKLSASDQLSKHQFYSNK 238
Query: 255 KPD 257
D
Sbjct: 239 NAD 241
>gi|78221768|ref|YP_383515.1| glutamate racemase [Geobacter metallireducens GS-15]
gi|123572676|sp|Q39Y84|MURI_GEOMG RecName: Full=Glutamate racemase
gi|78193023|gb|ABB30790.1| glutamate racemase [Geobacter metallireducens GS-15]
Length = 276
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 7/216 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY D PYG + + + + S ++
Sbjct: 10 KAIGIFDSGVGGLTVLKEIIKALPQEDTIYFGDTARVPYGTKSPETVTRYSLEIASFLVH 69
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ +L V+ACNTA + L+ T S+ +G + P ++AAA T+SG + ++ T T+
Sbjct: 70 RDIKLL-VVACNTASACALEALQQTL-SIPVVGVIEPGARRAAAVTRSGRVGVIGTEGTI 127
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + I + + + + EE ++ + + G + + G
Sbjct: 128 RSSAYAKAIKRINPEVEVVTRACPLFVPLAEEGWTDNEVAHLTARTYLSG--LREAG--V 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYPL+ V + V +D+++ AR
Sbjct: 184 DTLVLGCTHYPLLKRVIGETIGEEVKLVDSAEETAR 219
>gi|78184894|ref|YP_377329.1| glutamate racemase [Synechococcus sp. CC9902]
gi|78169188|gb|ABB26285.1| glutamate racemase [Synechococcus sp. CC9902]
Length = 262
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 21/246 (8%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSGIGGL VL+++ IY+ D PYG+ ++ + + + D+ Q
Sbjct: 8 FDSGIGGLTVLRQVLERHGPVQCIYLGDTARVPYGSRSAPEIRLIAAEVVAWLRDQ-QVS 66
Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L +D E ++ P + +GA AAA Q+ + +L+TPAT+
Sbjct: 67 TVVMACNTTNALARDVAEGQAGGPVIGLIGA------AAAMVQTSRVGVLATPATV---- 116
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKRTD 193
S S + H ++++ E+ I+ + DE+++ + +
Sbjct: 117 ASEAYRSSIEALH---PGTLVVEQACPEFVPLIESGDLSSDELRRTAKEYLQPLLKASVE 173
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHALF 251
IVL CTHYPL+ V RQL P V +D + +AR+ +L P+ + + DD
Sbjct: 174 SIVLGCTHYPLLEPVLRQLLPDSVQLIDPAVGVARQLDSVLGAPKPSVGEGLHLDDCRFC 233
Query: 252 LSGKPD 257
++ PD
Sbjct: 234 VTADPD 239
>gi|330838748|ref|YP_004413328.1| Glutamate racemase [Selenomonas sputigena ATCC 35185]
gi|329746512|gb|AEB99868.1| Glutamate racemase [Selenomonas sputigena ATCC 35185]
Length = 283
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 5/218 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GG+ VL+++ L+P+ FIY D PYG + ++ L D
Sbjct: 29 KKEQPIGVFDSGLGGISVLRELVSLLPKEDFIYFGDAAHAPYGERTEREIRA-LTTAQID 87
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ V+ACNTA + LR + + +G PA+K A + + +++T A
Sbjct: 88 RMAAEGVKAVVLACNTATSAACAPLRRRYRQIPIIGMEPALKPAILSGEKPRVVVMATHA 147
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR+ + L+ + I + + VE +I+ + + +E F+ K
Sbjct: 148 TLRQKKFARLMERFKDAGEIVKLPCPEIVEFVERG----EIRSAALHEYLEERFLSVSQK 203
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTH+P + + + V D + AR
Sbjct: 204 PIDCVVLGCTHFPFVRDAIQDVVGQAVQIFDGAAGTAR 241
>gi|118475058|ref|YP_891779.1| glutamate racemase [Campylobacter fetus subsp. fetus 82-40]
gi|166231031|sp|A0RNJ6|MURI_CAMFF RecName: Full=Glutamate racemase
gi|118414284|gb|ABK82704.1| glutamate racemase [Campylobacter fetus subsp. fetus 82-40]
Length = 253
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL +L + FIY AD+ PYG + RL L
Sbjct: 3 IAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSKDEI-IRLCLNCVQFLTNL 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA + ELRS+F S+ +G PA+K G I +++TPAT+
Sbjct: 62 SVDMIVIACNTATSAAITELRSSF-SVPIIGMEPAVKLGV--NAGGDILVVATPATISGN 118
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
S+LIH + HL++ ++ E+A ++ E+ K ++ + + ++
Sbjct: 119 KLSDLIHKVNLESKTHLLA----LPKLVEFAQNMEFDSLEVLKYLKDEISKFDLSNISLL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLD 221
VL CTH+ FR + P +D
Sbjct: 175 VLGCTHFNYFKDSFRAILPNKTGIID 200
>gi|237725975|ref|ZP_04556456.1| glutamate racemase [Bacteroides sp. D4]
gi|229435783|gb|EEO45860.1| glutamate racemase [Bacteroides dorei 5_1_36/D4]
Length = 281
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 45/280 (16%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + + S + +
Sbjct: 12 IGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQAVSKLFELG 71
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
P L ++ACNTA T+ + L + LG + P + T+S + IL+T
Sbjct: 72 CP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRSRHVGILATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186
T++ SY+ + IH +S I+ V AC + ++ +E + E F++
Sbjct: 131 GTIKS-------ESYLLE--IHKLSPDIV---VTGEACPMWVSLVENNEYQSEGADYFVK 178
Query: 187 KEGKR-------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--- 236
+ R D I+L CTHYPL++ RQ +P + + + +AR + L R
Sbjct: 179 QHINRLLDKDPMIDTIILGCTHYPLLLDKIRQFTPGHIRIIAQGEYVARSLQDYLNRHPE 238
Query: 237 -------------INTHQTRVFDDHALFLSGKPDIAMRRL 263
+ T F++ A G+ DI + +
Sbjct: 239 MDARCEKGGKCRFLTTESENKFEESASIFLGRQDIKVESI 278
>gi|220930761|ref|YP_002507670.1| glutamate racemase [Clostridium cellulolyticum H10]
gi|220001089|gb|ACL77690.1| glutamate racemase [Clostridium cellulolyticum H10]
Length = 258
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 27/253 (10%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I DSG GG+ VL + +P+ ++IY AD PYG +++ + ++
Sbjct: 4 DKIGFLDSGFGGITVLSEALRQLPKENYIYYADIEHVPYGTKTKEEVRQYVFQAVEFMVS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA ++ ELR+ + LG PA+K A + +L+T TLR
Sbjct: 64 QGIKAL-VVACNTATSIAVRELRNMY-EFPILGMEPAVKPAVQNGNGKRVLVLATALTLR 121
Query: 134 RTYTSNLIHSYVSQCHI----------HLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
NL+ V Q H+ L +M+ +Y I + IKK+++G
Sbjct: 122 EEKFHNLVQR-VDQEHVVDYLPFPELVELAENMVF-----DYEKVIPV----IKKKLDGY 171
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ VL CTH+P+ ++ F+++ P +D +D S+ R + LL + T
Sbjct: 172 NL----NNYKTFVLGCTHFPIYINAFKEVLPPFIDIIDGSEGTIRYLKLLLEERHLISTN 227
Query: 244 VFDDHALFL-SGK 255
+ + +F SG+
Sbjct: 228 INGGNIVFFDSGR 240
>gi|212695391|ref|ZP_03303519.1| hypothetical protein BACDOR_04940 [Bacteroides dorei DSM 17855]
gi|237711572|ref|ZP_04542053.1| glutamate racemase [Bacteroides sp. 9_1_42FAA]
gi|265753000|ref|ZP_06088569.1| glutamate racemase [Bacteroides sp. 3_1_33FAA]
gi|212662026|gb|EEB22600.1| hypothetical protein BACDOR_04940 [Bacteroides dorei DSM 17855]
gi|229454267|gb|EEO59988.1| glutamate racemase [Bacteroides sp. 9_1_42FAA]
gi|263236186|gb|EEZ21681.1| glutamate racemase [Bacteroides sp. 3_1_33FAA]
Length = 281
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 45/280 (16%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + + S + +
Sbjct: 12 IGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQAVSKLFELG 71
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
P L ++ACNTA T+ + L + LG + P + T+S + IL+T
Sbjct: 72 CP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRSRHVGILATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186
T++ SY+ + IH +S I+ V AC + ++ +E + E F++
Sbjct: 131 GTIKS-------ESYLLE--IHKLSPDIV---VTGEACPMWVSLVENNEYQSEGADYFVK 178
Query: 187 KEGKR-------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--- 236
+ R D I+L CTHYPL++ RQ +P + + + +AR + L R
Sbjct: 179 QHINRLLDKDPVIDTIILGCTHYPLLLDKIRQFTPGHIRIIAQGEYVARSLQDYLNRHPE 238
Query: 237 -------------INTHQTRVFDDHALFLSGKPDIAMRRL 263
+ T F++ A G+ DI + +
Sbjct: 239 MDARCEKGGKCRFLTTESENKFEESASIFLGRQDIKVESI 278
>gi|83748331|ref|ZP_00945355.1| Glutamate racemase [Ralstonia solanacearum UW551]
gi|207723937|ref|YP_002254335.1| glutamate racemase protein [Ralstonia solanacearum MolK2]
gi|83724953|gb|EAP72107.1| Glutamate racemase [Ralstonia solanacearum UW551]
gi|206589144|emb|CAQ36106.1| glutamate racemase protein [Ralstonia solanacearum MolK2]
Length = 277
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCEW 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + L VIACNTA LR ++ +G P +K A A +QS ++ +L+T +
Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + ++
Sbjct: 122 TLRSDKFARLLGNVSGDCQVLCQPGYGLVPLIERG----DTHSPAVLELLQAYLQPMLDA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYP + ++++ + +D ++AR
Sbjct: 178 GADTLVLGCTHYPFLRDAIQEIAGERLALIDTGHAVAR 215
>gi|149369705|ref|ZP_01889557.1| glutamate racemase [unidentified eubacterium SCB49]
gi|149357132|gb|EDM45687.1| glutamate racemase [unidentified eubacterium SCB49]
Length = 263
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWED----HALKKRLMFLFS 69
NSI +FDSG+GG + +++ L+P + +Y+AD + PYGN H K FL
Sbjct: 5 NSIGLFDSGVGGTSIWKEINALLPFENTLYLADSLNAPYGNKTRDEIIHLSIKNTEFL-- 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L+K ++ V+ACNTA T + LR + + +G PA+K AA T++ I IL+T
Sbjct: 63 --LNKNCKMI-VVACNTATTNAINILREKY-DIPIIGIEPAMKPAALQTKTKSIGILATK 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL +SNL H ++ + I+ + KI E+ + +
Sbjct: 119 GTL----SSNLFHKTAAKFTKDISVIEIIGEGLVPLIEQGKIHTPELTELLFKYTEPMVA 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL C+HYP ++ + P + +D+ ++AR+ R +L
Sbjct: 175 ASIDHLVLGCSHYPYLIPKLLTILPDNITIIDSGAAVARQTRSVL 219
>gi|261886270|ref|ZP_06010309.1| glutamate racemase [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 242
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL +L + FIY AD+ PYG + RL L
Sbjct: 3 IAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSKDEI-IRLCLNCVQFLTNL 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA + ELRS+F S+ +G PA+K G I +++TPAT+
Sbjct: 62 SVDMIVIACNTATSAAITELRSSF-SVPIIGMEPAVKLGV--NAGGDILVVATPATISGN 118
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
S+LIH + HL++ ++ E+A ++ E+ K ++ + + ++
Sbjct: 119 KLSDLIHKVNLESKTHLLA----LPKLVEFAQNMEFDSLEVLKYLKDEISKFDLSNISLL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLD 221
VL CTH+ FR + P +D
Sbjct: 175 VLGCTHFNYFKDSFRAILPNKTGIID 200
>gi|300703743|ref|YP_003745345.1| glutamate racemase [Ralstonia solanacearum CFBP2957]
gi|299071406|emb|CBJ42725.1| Glutamate racemase [Ralstonia solanacearum CFBP2957]
Length = 277
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCEW 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + L VIACNTA LR ++ +G P +K A A +QS ++ +L+T +
Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + ++
Sbjct: 122 TLRSDKFARLLGNVSGDCQVLCQPGYGLVPLIERG----DTHSPAVLELLQAHLQPMLDA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYP + ++++ + +D ++AR
Sbjct: 178 GADTLVLGCTHYPFLRDAIQEIAGERLALIDTGHAVAR 215
>gi|228476470|ref|ZP_04061160.1| glutamate racemase [Streptococcus salivarius SK126]
gi|228251891|gb|EEK10937.1| glutamate racemase [Streptococcus salivarius SK126]
Length = 271
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAEQIRQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K ++ VIACNTA ++ +E++ + LG V P A +QSG
Sbjct: 53 YTWQLVKFLLTKDVKMI-VIACNTATAVVWEEIKGAL-DIPVLGVVLPGSSAAIKSSQSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I Q ++ +S A VE +I KK +
Sbjct: 111 HIGVIGTPMTIASNIYEQKIKHLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ESMAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDD 247
+R +D
Sbjct: 226 SREVED 231
>gi|187250694|ref|YP_001875176.1| glutamate racemase [Elusimicrobium minutum Pei191]
gi|186970854|gb|ACC97839.1| Glutamate racemase [Elusimicrobium minutum Pei191]
Length = 264
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 124/248 (50%), Gaps = 7/248 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL +L+ ++ +P+ +FIY D PYG+ + + + + + L+
Sbjct: 6 IGIFDSGLGGLTILRALQNDLPKENFIYFGDSARVPYGSKSKSTVLQYSLEI-AKFLETQ 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRR 134
V+ACNTA + L+ S+ G + A AA T++ ++++ T T+
Sbjct: 65 NIKFLVVACNTASAFALEALKKEL-SIPVFGVIEAGAYAAVTKTKNKKVAVIGTSGTVSS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+I+++ + + +++ + +EE + + ++ + ++K G +D
Sbjct: 124 GSYKKVINAFDKKVKVFEIATPLFVPFIEEGWADTRAAKLVAEEYLSA--VKKSG--SDT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYP+I + +++ V+ +D++++I++ L + +T+ ++ S
Sbjct: 180 LILGCTHYPIIKTLIKKIMGSKVNLIDSAETISKATAGFLKSKDMLKTKGSGSVKIYASD 239
Query: 255 KPDIAMRR 262
PD+ ++
Sbjct: 240 APDLFAKK 247
>gi|148262569|ref|YP_001229275.1| glutamate racemase [Geobacter uraniireducens Rf4]
gi|146396069|gb|ABQ24702.1| glutamate racemase [Geobacter uraniireducens Rf4]
Length = 288
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 110/215 (51%), Gaps = 7/215 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY+ D PYG+ + + + S ++
Sbjct: 13 KAIGIFDSGVGGLTVLKEIIKTLPQEDTIYLGDTARVPYGSKSPETVTRYSRQITSFLVQ 72
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ +L V+ACNTA + L+ FP + +G + P ++AA+ T+SG + ++ T T+
Sbjct: 73 RDIKML-VVACNTASAVSLAALKKEFP-IPIVGVIEPGARRAASVTRSGKVGVIGTAGTI 130
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + I + + + + EE ++ + ++G +++EG
Sbjct: 131 KSSAYAKAIKRINPEIEVVTRACPLFVPLAEEGWVDNEVARLTAQAYLQG--VKEEG--V 186
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTHYP++ + ++ V +D+++ A
Sbjct: 187 DTLVLGCTHYPILKGIIAEVMGGGVTLVDSAEETA 221
>gi|303239730|ref|ZP_07326254.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
gi|302592667|gb|EFL62391.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
Length = 260
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 12/228 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS--DILD 73
I FDSGIGG+ VL ++P +IY AD + PYG +KK ++FS D +
Sbjct: 3 IGFFDSGIGGITVLYDTLKVLPNEDYIYYADTLNVPYGPKPKDEVKK---YIFSAIDFII 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPAT 131
K + VIACNTA ++ +ELR+ + S+ +G PAIK A + +L +T T
Sbjct: 60 KQEVKAVVIACNTATSVAIEELRNKY-SIPIVGMEPAIKPAVEKDRDANKRVLVTATALT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L+ NLI ++ H+V + L V +++ ++ E+ + ++ + +
Sbjct: 119 LKEEKLHNLIAKLDNE---HVVDLLPLPGLV-QFSEKLEFNEEIVLPYLKEQLSKYDFNN 174
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ IVL CTH+ +FR+L+ + +D + A + +L +N+
Sbjct: 175 YETIVLGCTHFSYFKDMFRKLALSHIKVIDGNIGTANNLKRILKEMNS 222
>gi|257126623|ref|YP_003164737.1| glutamate racemase [Leptotrichia buccalis C-1013-b]
gi|257050562|gb|ACV39746.1| glutamate racemase [Leptotrichia buccalis C-1013-b]
Length = 261
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 8/201 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSGIGGL VL+++R ++P Y D PYG + + + +L+K
Sbjct: 2 SIGVFDSGIGGLTVLKEIRKVLPNEKIYYFGDTARVPYGEKTKELIIRYSKEIVEFLLEK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA L EL+ F + +G + A + A T++G I ++ T AT+
Sbjct: 62 DVSAI-VVACNTATALALKELKEIF-KIPIIGVIEAGARTAINTTKNGKIGVIGTKATIN 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I + ++ + + + VEE K+ IK +++ ++ D
Sbjct: 120 SEKYTEEIKLFNAEAEVFQKACPLFVPAVEEGILNGKLVNQIIK-----TYLDDFNEKID 174
Query: 194 VIVLACTHYPLIVHVFRQLSP 214
++L CTHYPL+ ++ P
Sbjct: 175 TLILGCTHYPLLKEAISKIYP 195
>gi|329907999|ref|ZP_08274775.1| Glutamate racemase [Oxalobacteraceae bacterium IMCC9480]
gi|327546835|gb|EGF31763.1| Glutamate racemase [Oxalobacteraceae bacterium IMCC9480]
Length = 275
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL+ +R +P+ +Y +D PYG + +++R + + + +L +
Sbjct: 12 IGVFDSGIGGLSVLRHIRANLPQEALLYFSDAQFAPYGGRPEQQIEERALAIGA-LLVAH 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q V+ACN+A LR +P++ +G P +K AAA + S ++ +L+T ATL
Sbjct: 71 QVKALVVACNSATAAAIAALRHAYPALIVVGVEPGLKPAAAVSASRIVGVLATEATLASE 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L + + + ++ LA R+E+ + + + + + + D
Sbjct: 131 RFARLRMTLSAATGVTFLAQPCPGLALRIEQDSMHLP----DAMALLRSFVLPLLDQGAD 186
Query: 194 VIVLACTHYPL----IVHVFRQLSPWPVDWLDNSDSIARR 229
+VL CTHYP I + S V +D ++AR+
Sbjct: 187 TLVLGCTHYPFVQEQIAAIASAHSTNSVTLIDTGAAVARQ 226
>gi|308270889|emb|CBX27499.1| Glutamate racemase [uncultured Desulfobacterium sp.]
Length = 266
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 5/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL V++ + +P Y IY D PYG+ + + + +L+
Sbjct: 7 IGIFDSGIGGLTVVKAVMGKIPGYDIIYFGDTARTPYGSKSSETVIQYAIEDTEFLLNNG 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA ++ D + F F PA++ A ++ I ++ T AT++
Sbjct: 67 ANII-VVACNTASSVATDSIVKKFDVPVFEVITPAVELAVESSRKMSIGVIGTRATVKSC 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
N I + + I+ V+ +L VEE I E ++ + K+ D +
Sbjct: 126 VYENKIKAINAGAKIYSVACPLLVPLVEEGW----INRPETSMIVKKYLHSLKVKQIDTL 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+L CTHYPL+ H+ + V+ +D+S +A +
Sbjct: 182 ILGCTHYPLLKHIICRKIGKRVNIIDSSLGVADK 215
>gi|317129840|ref|YP_004096122.1| glutamate racemase [Bacillus cellulosilyticus DSM 2522]
gi|315474788|gb|ADU31391.1| glutamate racemase [Bacillus cellulosilyticus DSM 2522]
Length = 279
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 32/261 (12%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V+ ++ +P+ IY+ D PYG + ++K + +
Sbjct: 1 MDRPIGVIDSGVGGLTVVSELIRQLPKEEIIYIGDTARCPYGPRPESEVRKYTWEMIDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L K +L VIACNTA ++ +E + P + +G + P A T++ + ++ T
Sbjct: 61 LLKDIKML-VIACNTATAVVLEEAKQQLP-IPVVGVIHPGTIAALKVTKTDHVGVIGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEKE 188
T I+S + + +++ + +VE AC + + E + E I KE
Sbjct: 119 T---------INSGAYERELTMINHEV---KVESLACPNLVPLVERGLFSSDEASEIVKE 166
Query: 189 G------KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
R D ++L CTHYPL+ V R+++ V+ + + D AR LL HQ
Sbjct: 167 SLAPILSTRIDSLILGCTHYPLLAPVIREIAGEKVEIICSGDETAREVSALL----YHQE 222
Query: 243 RVFDD-----HALFLSGKPDI 258
+F + HA + +G D+
Sbjct: 223 LLFKEERIPKHAFYSTGSSDM 243
>gi|171322906|ref|ZP_02911602.1| glutamate racemase [Burkholderia ambifaria MEX-5]
gi|171091727|gb|EDT37266.1| glutamate racemase [Burkholderia ambifaria MEX-5]
Length = 287
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 1 MKIDNYPCEKKLQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + + P ++ + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++
Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSHHAPYGPRDEA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L + VIACNTA +R S+ +G P IK AAA +
Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+G+ +L+T +TL L+ Y + L +E ++
Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
+E D +VL CTHYP R L + +D SD+IAR+ AR L
Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDLVGDRLTIVDTSDAIARQLARVL 230
>gi|322373870|ref|ZP_08048405.1| glutamate racemase [Streptococcus sp. C150]
gi|321277242|gb|EFX54312.1| glutamate racemase [Streptococcus sp. C150]
Length = 271
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESVVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K ++ VIACNTA ++ +E++ + LG V P A +QSG
Sbjct: 53 YTWQLVRFLLTKNVKMI-VIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSQSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ SN+ + + + + R +IK KK +
Sbjct: 111 KIGVIGTPMTI----ASNIYEQKIKRLAPQMAVLSLPCPRFAPIVESNEIKSSVAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ESMAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDD 247
+R +D
Sbjct: 226 SREVED 231
>gi|332877978|ref|ZP_08445709.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684082|gb|EGJ56948.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 272
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 23/231 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL---FSDIL 72
I +FDSG+GG + +++ LMP + +++AD+ PYG K+ ++ L + L
Sbjct: 11 IGLFDSGVGGTTIWKEINALMPNENTLFLADNKNAPYG----EKTKEEIIALCDANTQFL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNT T LR + + F+G PAIK A + + I +L+T
Sbjct: 67 LNHNAKIIVVACNTGTTNAIAYLRDKYKQVPFIGIEPAIKPAGLQSITKKIGVLAT---- 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK----- 187
RRT TS+L + H+ + + +V E + I+ +++ ++K
Sbjct: 123 RRTLTSDLFAK--TSEHLKQEEKIEIIEQVGEGLVDL-IEAGQMESAKMTALLQKYLQPM 179
Query: 188 --EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
EG D +VL CTHYP ++ ++ P + +D+ ++AR+ R +L +
Sbjct: 180 VAEG--IDYLVLGCTHYPYLLPQIQRFIPVSIKVIDSGYAVARQTRNILAQ 228
>gi|299066438|emb|CBJ37623.1| Glutamate racemase [Ralstonia solanacearum CMR15]
Length = 277
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 6/218 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAGRTLRVCEW 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + L VIACNTA LR ++ +G P +K A A ++S ++ +L+T +
Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLREQL-AVPVIGVEPGLKPAVATSRSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + + +
Sbjct: 122 TLRSDKFARLLGTVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLRAYLLPMLEA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYP + R+++ + +D ++AR
Sbjct: 178 GADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVAR 215
>gi|310642114|ref|YP_003946872.1| glutamate racemase 2 [Paenibacillus polymyxa SC2]
gi|309247064|gb|ADO56631.1| Glutamate racemase 2 [Paenibacillus polymyxa SC2]
Length = 262
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 8/226 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL ++P ++Y AD + PYG+ +KK ++ + + +
Sbjct: 3 IGFFDSGIGGITVLHDTLKVLPNEDYMYYADTLNVPYGHKTKDEVKKYVLNAI-EFISQQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133
+ VIACNTA + +E+R + S+ +G PA+K A ++ + + +T TLR
Sbjct: 62 KVKAIVIACNTATSAAIEEIRGKY-SIPIIGMEPAVKPAVKSKKNIDKRVLVTATALTLR 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NLI ++ H+V + L V ++A + E + ++ + + +
Sbjct: 121 EERLQNLITKLDNE---HVVDLLPLPKLV-QFAESFEFNEQIVLPYLQEQLSIYDLSKYE 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
IVL CTH+ +FR+L V+ +D ++ A+ + +L +N+
Sbjct: 177 TIVLGCTHFSYYKDIFRKLFSSDVNIIDGNNGTAKNLKKVLEEMNS 222
>gi|197116675|ref|YP_002137102.1| glutamate racemase [Geobacter bemidjiensis Bem]
gi|197086035|gb|ACH37306.1| glutamate racemase [Geobacter bemidjiensis Bem]
Length = 278
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 9/216 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L
Sbjct: 4 KAIGIFDSGVGGLTVLKEVVRALPQEDTIYLGDTARVPYGTKSPETVVRYSRQITRYLLS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ VL V+ACNTA + L+ F S+ +G + P + AAA T+SG + ++ T AT+
Sbjct: 64 RDIKVL-VVACNTASAVALSALQQEF-SIPIVGVIEPGARAAAAVTKSGKVGVIGTTATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR- 191
+ + I + + + + EE ++E+ + G ++E K
Sbjct: 122 ASSAYTKAIKRINPEIEVVSRACPLFVPLAEEGWV-----DNEVARLTAGIYLEDLKKHG 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTHYP++ V ++ V +D ++ A
Sbjct: 177 VDTLVLGCTHYPILRKVIAEVMGPEVTLVDAAEQTA 212
>gi|110639009|ref|YP_679218.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
gi|110281690|gb|ABG59876.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
Length = 269
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 11/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I IFDSGIGGL V + L+P IY D FPYG+ A++ + + +L
Sbjct: 5 QRPIGIFDSGIGGLTVAYAVNQLLPNESIIYFGDTAHFPYGDKSTAAIQSYAVKITDMLL 64
Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
++ V+ +IACN+ A+ L+K+ S + + P ++ A G + ++ T
Sbjct: 65 QQHCKVI-LIACNSASSAAYQLVKEYAGSRAKVINVID--PIVRYVGAKYPKGKVGLIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ I + + +++ +LA +EE I E I ++ +K
Sbjct: 122 KKTVSSNVYQRKIDKLNKEITLKALATPLLAPMIEEGYFNNAISESIILNYLQ----DKS 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ ++L CTHYPLI L VD +D+SD +A + L N T H
Sbjct: 178 LDGIESLILGCTHYPLIKEQINNLYKGSVDVIDSSDIVAAAVKDYLADTNLLNTDADVQH 237
Query: 249 ALFLS 253
++S
Sbjct: 238 KFYVS 242
>gi|172061157|ref|YP_001808809.1| glutamate racemase [Burkholderia ambifaria MC40-6]
gi|171993674|gb|ACB64593.1| glutamate racemase [Burkholderia ambifaria MC40-6]
Length = 287
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 1 MKIDNYPCEKKLQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + + P ++ + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++
Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSQHAPYGPRDEA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L + VIACNTA +R S+ +G P IK AAA +
Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+G+ +L+T +TL L+ Y + L +E ++
Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
+E D +VL CTHYP R + + +D SD+IAR+ AR L
Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLTIVDTSDAIARQLARVL 230
>gi|29653649|ref|NP_819341.1| glutamate racemase [Coxiella burnetii RSA 493]
gi|161830181|ref|YP_001596247.1| glutamate racemase [Coxiella burnetii RSA 331]
gi|29540911|gb|AAO89855.1| glutamate racemase [Coxiella burnetii RSA 493]
gi|161762048|gb|ABX77690.1| glutamate racemase [Coxiella burnetii RSA 331]
Length = 280
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 10/227 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ +P +IY+ D PYG + R + IL
Sbjct: 7 IGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETV-SRYATQMASILIAQ 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA T +L+ F + +G V P + A T++ +++L+T T++
Sbjct: 66 NIKLLVVACNTASTAALPQLQQQFSHIPIIGVVEPGARAAVVATKNNKVALLATETTIQS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EG-KR 191
N + + Q I + + + EE C DEI + ++E G +
Sbjct: 126 GIYQNTLRALSPQIEITTQTCGLFVALAEE-GC----TNDEIALLVAKKYLEPIINGYHQ 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D ++L CTH+P+++ + ++ ++++ + A + +L + N
Sbjct: 181 CDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNN 227
>gi|17546675|ref|NP_520077.1| glutamate racemase [Ralstonia solanacearum GMI1000]
gi|20177976|sp|Q8XY07|MURI_RALSO RecName: Full=Glutamate racemase
gi|17428974|emb|CAD15658.1| probable glutamate racemase protein [Ralstonia solanacearum
GMI1000]
Length = 277
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 6/218 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAGRTLRVCEW 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + L VIACNTA LR ++ +G P +K A A ++S ++ +L+T +
Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLREQL-AVPVIGVEPGLKPAVATSRSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + + +
Sbjct: 122 TLRSDKFARLLGNVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLRAYLLPMLEA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYP + R+++ + +D ++AR
Sbjct: 178 GADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVAR 215
>gi|317131748|ref|YP_004091062.1| glutamate racemase [Ethanoligenens harbinense YUAN-3]
gi|315469727|gb|ADU26331.1| glutamate racemase [Ethanoligenens harbinense YUAN-3]
Length = 271
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSG+GGL V++ + +P IY D PYG + + K
Sbjct: 1 MDNRP--------IGVFDSGLGGLTVIRALERTLPHEDLIYFGDTGRVPYGTKGNDTIVK 52
Query: 63 RLMFLFSDILDKYQPVLSV----IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+S+ + ++ V IACNT ++ +E+ + F PA++ A T
Sbjct: 53 -----YSEQIVRFLRGFDVKAILIACNTVSSVAFEEVCAQAGVPVFGVVEPAVEAAVRTT 107
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEI 176
+ G I +L T AT+R IH Y+ + + + VE +A G ++ E
Sbjct: 108 RGGEILVLGTSATVRSGAYEQAIHRYLPDAGVRSRACPLFVPLVENGHFAAGDQLAELAA 167
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ FI G+ D ++L CTHYP++ + ++ V+ +D+ +A RA
Sbjct: 168 HEYLD-SFI---GQGVDTVILGCTHYPILRSLIAKIMGGQVELVDSGCEMAVRA 217
>gi|326202256|ref|ZP_08192125.1| glutamate racemase [Clostridium papyrosolvens DSM 2782]
gi|325987374|gb|EGD48201.1| glutamate racemase [Clostridium papyrosolvens DSM 2782]
Length = 258
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 26/231 (11%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I DSG GG+ VL + +P+ ++IY AD PYG +++ +F + L
Sbjct: 4 DKIGFLDSGFGGITVLSEALRQLPQENYIYYADIEHVPYGTKTKEEVRE-YVFRAVEFLV 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K V+ACNTA ++ ELR + LG PA+K A + +L+T TLR
Sbjct: 63 KQGIKALVVACNTATSIAVRELRGMY-DFPILGMEPAVKPAVRNGNGKRVLVLATALTLR 121
Query: 134 RTYTSNLIHSYVSQCH----------IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
NL+ V Q H + + +MI +Y + + IK ++EG
Sbjct: 122 EEKFHNLVQR-VDQEHVVDYLPFPELVEMAENMIF-----DYDSIVPV----IKSKLEGF 171
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+E VL CTH+P+ F+++ P VD +D S+ R + LL
Sbjct: 172 NLEN----YKTFVLGCTHFPIYRDAFKKVLPSFVDIIDGSEGTIRYLKRLL 218
>gi|312862544|ref|ZP_07722786.1| glutamate racemase [Streptococcus vestibularis F0396]
gi|322517484|ref|ZP_08070357.1| glutamate racemase [Streptococcus vestibularis ATCC 49124]
gi|311101949|gb|EFQ60150.1| glutamate racemase [Streptococcus vestibularis F0396]
gi|322123966|gb|EFX95525.1| glutamate racemase [Streptococcus vestibularis ATCC 49124]
Length = 271
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 16/246 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K ++ VIACNTA ++ +E++ + LG V P A +QSG
Sbjct: 53 YTWQLVKFLLTKDVKMI-VIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSQSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I Q ++ +S A VE + + +I E
Sbjct: 111 QIGVIGTPMTIASNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAK-KIVYESM 169
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++K D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 170 APLVDK----VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDD 247
+R +D
Sbjct: 226 SREVED 231
>gi|241663373|ref|YP_002981733.1| glutamate racemase [Ralstonia pickettii 12D]
gi|240865400|gb|ACS63061.1| glutamate racemase [Ralstonia pickettii 12D]
Length = 280
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ + +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAISAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCEW 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+T +
Sbjct: 64 LVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + ++
Sbjct: 122 TLRSEKFARLLAAASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLQAYLQPMLDA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYP + R+++ + +D ++AR
Sbjct: 178 HADTLVLGCTHYPFLEDAIREIAGDRLTLIDTGHAVAR 215
>gi|255692422|ref|ZP_05416097.1| glutamate racemase [Bacteroides finegoldii DSM 17565]
gi|260621890|gb|EEX44761.1| glutamate racemase [Bacteroides finegoldii DSM 17565]
Length = 280
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + S + D
Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVSKLFD-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L + P+ LG + P ++ TQ+ I IL+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPNIDPARRVLGVIRPTVECIGNITQNQHIGILATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ IH + V+ + S VE + + I+K I+ +
Sbjct: 131 GTVKSESYPLEIHKLFPDIRVSGVACPMWVSLVENNESQNEGTDYFIRKYIDQLLTKD-- 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D ++L CTH+P+++ RQ P + + + +A+ + L R
Sbjct: 189 PQIDTVILGCTHFPILLPKIRQYIPEHISVISQGEYVAQSLKDYLRR 235
>gi|150389186|ref|YP_001319235.1| glutamate racemase [Alkaliphilus metalliredigens QYMF]
gi|149949048|gb|ABR47576.1| glutamate racemase [Alkaliphilus metalliredigens QYMF]
Length = 279
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL + +PE ++Y D PYG +KK L F + L
Sbjct: 10 IGVFDSGVGGISVLADLISQLPEESYVYYGDSGNAPYGIKSKDEVKK-LSFDVVEFLLAQ 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + DELR++ + +G PA+K A SG + +++TP TLR
Sbjct: 69 GIKALVVACNTATSAAIDELRASL-DIPVIGMEPALKPALELHPSGRVIVMATPVTLREK 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ LI + + + L +E + ++ +E F + D I
Sbjct: 128 KFNTLIDRFNDCGEVIKLPCPGLVEIIEREGA----RGPALETYLEKLFSPFNMEEIDAI 183
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
VL CTHY + ++ +D + A+ R LL N
Sbjct: 184 VLGCTHYVFVRESIAEMIGNHAALIDGNGGTAKHVRRLLQEEN 226
>gi|293115464|ref|ZP_05791593.2| glutamate racemase [Butyrivibrio crossotus DSM 2876]
gi|292809801|gb|EFF69006.1| glutamate racemase [Butyrivibrio crossotus DSM 2876]
Length = 280
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 7/213 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GG+ VL ++ LMP +FIY D PYG + + L +D+L
Sbjct: 29 VFDSGVGGISVLSELVKLMPYENFIYFGDSANAPYGTKPLDKVAE-LTIHTADMLIAKGC 87
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
VIACNTA +R+ +P++ +G PA+K AA I +L+T TL ++
Sbjct: 88 KCLVIACNTATVAAVSRIRNMYPAIPVIGIEPALKPAALDNPGKRILVLATHITLNQSKF 147
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
NL+ Y I + + + VE+ G+ E ++ E D +VL
Sbjct: 148 LNLMTRYKDLADIFTLEAPGIVEAVEK---GLT-DSQEFMDYLKNLLHEYIDNPVDAVVL 203
Query: 198 ACTHYPLIV-HVFRQLSPWPVDWLDNSDSIARR 229
CTHYP + + L P + D + AR
Sbjct: 204 GCTHYPFVKRQILEALQYTPAVY-DGGNGTARE 235
>gi|315225613|ref|ZP_07867422.1| glutamate racemase [Capnocytophaga ochracea F0287]
gi|314944430|gb|EFS96470.1| glutamate racemase [Capnocytophaga ochracea F0287]
Length = 269
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 111/224 (49%), Gaps = 9/224 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL---FSDIL 72
I +FDSG+GG + +++ LMP + +++AD+ PYG K+ ++ L + L
Sbjct: 11 IGLFDSGVGGTTIWKEVNALMPNENTLFIADNKNAPYG----EKTKEEIIALCDANTRFL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL
Sbjct: 67 LENNAKIIVVACNTGTTNAISYLRNKYKEVPFIGIEPAIKPASLQSVTKKIGVLATRSTL 126
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + ++ + V+ G +IK E+ + + +
Sbjct: 127 ASDLFAKTSEHLKQEEQVEIIEQ-VGEGLVDLIEAG-RIKSPEMTLLLRKYLLPMVAEGI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
D +VL CTHYP ++ ++L P + +D+ ++A++ R +L +
Sbjct: 185 DYLVLGCTHYPYLLPQIQELIPPHIKVIDSGYAVAKQTRNILSQ 228
>gi|116070411|ref|ZP_01467680.1| Glutamate racemase [Synechococcus sp. BL107]
gi|116065816|gb|EAU71573.1| Glutamate racemase [Synechococcus sp. BL107]
Length = 262
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 31/251 (12%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSGIGGL VL+++ IY+ D PYG+ ++ + + + D+ Q
Sbjct: 8 FDSGIGGLTVLRQVLERHGPVQCIYLGDTARVPYGSRSAPEIRLIAAEVVAWLRDQ-QVS 66
Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L +D E ++ P + +GA AAA Q+ + +L+TPAT+
Sbjct: 67 TVVMACNTTNALARDVAEGQAGGPVIGLIGA------AAAMVQTSRVGVLATPATV---- 116
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCFIEKE 188
S+ + + ++ + V E AC + DE+++ +
Sbjct: 117 --------ASEAYRFSIEALHPGTLVVEQACPEFVPLIESGDLSSDELRRTAKEYLHPLL 168
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFD 246
+ IVL CTHYPL+ V RQL P V +D + +AR+ +L P+++ + D
Sbjct: 169 EASVESIVLGCTHYPLLEPVLRQLLPDSVQLIDPAVGVARQLDSVLGAPKLSVGEGLHLD 228
Query: 247 DHALFLSGKPD 257
D ++ PD
Sbjct: 229 DCRFCVTADPD 239
>gi|220931107|ref|YP_002508015.1| glutamate racemase [Halothermothrix orenii H 168]
gi|254766117|sp|B8D151|MURI_HALOH RecName: Full=Glutamate racemase
gi|219992417|gb|ACL69020.1| glutamate racemase [Halothermothrix orenii H 168]
Length = 253
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ VL++ L+P +IY AD PYG + + +++ + ++++
Sbjct: 3 IGIFDSGVGGITVLKEALNLLPGEDYIYYADTANVPYGTKDKNEVRQYIFKAVEFLINRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA ++ +LR T+ +G PA+K A +++ + +L+TP T+R
Sbjct: 63 IEAL-VVACNTATSIAIKDLRETY-QFPIVGMEPAVKPAVERSRNKKVLVLATPLTIREE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL+ ++ +V S+ L V EYA G E+ I ++ + +
Sbjct: 121 KFRNLVSRVKAE---DIVDSLGLPGLV-EYAEGFVFDENIIIPYLKDRLSPFNLQEYGTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+ +F ++ P +D +D + R + LL
Sbjct: 177 VLGCTHFLYFRDIFNKIIPDHIDIIDGNKGTVRHLKNLL 215
>gi|86157092|ref|YP_463877.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773603|gb|ABC80440.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 259
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 14/247 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P +Y+ D PYG + + + +L
Sbjct: 2 SRIGIFDSGVGGLTVQRAILAALPSADTVYLGDTARVPYGTKSAETVTQ-YSLRNARVLA 60
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ + L V+ACNTA + LR+ S+ LG V P + AA +++G I ++ T T+
Sbjct: 61 RREIDLLVVACNTASAVALPALRAEL-SVPVLGVVDPGARVAAKASRTGRIGVIGTQGTV 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191
I + + + EE G +DE+ + I +++ G
Sbjct: 120 ASGAYQEAIRRERPGAEVVARACPLFVPLAEE---GWTDPDDEVVRGIVRRYLDPLRGAA 176
Query: 192 TDVIVLACTHYPLI-VHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRVFD 246
D +VL CTHYPL+ + R+L V +D++++IA R +P R H+ V D
Sbjct: 177 IDTLVLGCTHYPLLRAAIARELP--EVRLVDSAEAIAEEVRARIPAAPGRTGVHRFLVTD 234
Query: 247 DHALFLS 253
FL+
Sbjct: 235 VPERFLA 241
>gi|166030602|ref|ZP_02233431.1| hypothetical protein DORFOR_00268 [Dorea formicigenerans ATCC
27755]
gi|166029604|gb|EDR48361.1| hypothetical protein DORFOR_00268 [Dorea formicigenerans ATCC
27755]
Length = 272
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL + ++PE F+Y AD+ PYG ++ + + + ++ K
Sbjct: 2 KIGIFDSGMGGLSVLHRALRMIPEADFLYYADEEHVPYGEKTREQVRGYIDEIIAFMIKK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132
Q VIACNTA ++ E RS FP + +G PA+K+A + G I + +TP T+
Sbjct: 62 -QVDAIVIACNTATSVATKEYRSQFP-LPIVGMEPAVKKAVEEYADRPGRILVAATPITI 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + +H V + + ++ ++ +A +D++ ++ + +
Sbjct: 120 Q----GDKLHHLVDRVDKRDMVDLVALPKLVRFAEQEIFDQDQVVPYLKEALKDYPLEEY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
VL CTH+ ++++ P ++++D ++ R
Sbjct: 176 KAFVLGCTHFNYFKESYQEIFPNKIEFVDGNEGALR 211
>gi|269122263|ref|YP_003310440.1| glutamate racemase [Sebaldella termitidis ATCC 33386]
gi|268616141|gb|ACZ10509.1| glutamate racemase [Sebaldella termitidis ATCC 33386]
Length = 258
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 9/230 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI IFDSG+GGL VL+++R + P Y D PYG + + + +L K
Sbjct: 2 SIGIFDSGLGGLTVLKEVRKIFPNEEIFYFGDTARVPYGEKTKELIIRYSKEITDFLLTK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133
VL V+ACNTA L +EL++ + + +G + A ++ A + T++ I ++ T AT+
Sbjct: 62 NINVL-VVACNTATALALEELKAVY-DIPVIGVIEAGVRSALSVTKTNEIGVIGTKATIN 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
IH ++ + + VEE +I E IK + G F +K D
Sbjct: 120 SEKYKQEIHRRNKDIVVYQKACPLFVHVVEEGLLDGEIIESIIKHYL-GDFDDK----VD 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
++L CTHYPL+ +++ P ++ +D + A + +L N + +
Sbjct: 175 TLILGCTHYPLLKKEIQKIYP-DLNLIDPAMETALDLKKVLTENNAAENK 223
>gi|196250191|ref|ZP_03148885.1| glutamate racemase [Geobacillus sp. G11MC16]
gi|196210375|gb|EDY05140.1| glutamate racemase [Geobacillus sp. G11MC16]
Length = 264
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIIRQLPKERIIYLGDTARCPYGPRPIEEIRQ-FTWQMIHY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + VIACNTA ++ DE+R+ + LG V P + A T++G I ++ T
Sbjct: 60 LQQYPLKMLVIACNTATAVVLDEVRAKL-DIPVLGVVHPGARAALKATKNGHIGVIGTVG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + S + H+ ++ VE + ++ + +
Sbjct: 119 TVRSKAYEKALQSINPRVHVESLACPKFVPLVESG----DFEGEKALAIVAESLAPLRPR 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
DV++L CTHYPL+ + R+ V + + D AR +L + T + +H
Sbjct: 175 PIDVLILGCTHYPLLAPLIREYMGKKVKLICSGDETAREVSAILHHSHLLYTGGCEPEHL 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G ++ + + FG
Sbjct: 235 FFTTGSKELFEKISRKWFG 253
>gi|224543164|ref|ZP_03683703.1| hypothetical protein CATMIT_02364 [Catenibacterium mitsuokai DSM
15897]
gi|224523951|gb|EEF93056.1| hypothetical protein CATMIT_02364 [Catenibacterium mitsuokai DSM
15897]
Length = 264
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 5/195 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GG+ VLQ + +MP + + D + PYG +++ + +
Sbjct: 11 KKEEYIGVFDSGVGGVSVLQAIHEMMPGENLYFFGDSLNAPYGEKTLEDVQQLTLNAIEN 70
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ K VIACNTA + LR + + +G PA+K AA ++ I +++T
Sbjct: 71 MNKKKHLKAIVIACNTATSAAVTLLREKYTDIPVIGIEPALKPAALSKKNSCILVMATAN 130
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR L Y I V LA R+E+ + E ++ + + +GK
Sbjct: 131 TLRLDKFHQLAERYDKSATIIPVPCYGLAKRIEQG----NLDEPDLIELLTDLIGPYKGK 186
Query: 191 RTDVIVLACTHYPLI 205
D +VL CTHYP +
Sbjct: 187 -VDSVVLGCTHYPFV 200
>gi|256820188|ref|YP_003141467.1| glutamate racemase [Capnocytophaga ochracea DSM 7271]
gi|256581771|gb|ACU92906.1| glutamate racemase [Capnocytophaga ochracea DSM 7271]
Length = 269
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 111/224 (49%), Gaps = 9/224 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL---FSDIL 72
I +FDSG+GG + +++ LMP + +++AD+ PYG K+ ++ L + L
Sbjct: 11 IGLFDSGVGGTTIWKEVNALMPNENTLFIADNKNAPYG----EKTKEEIIALCDANTRFL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL
Sbjct: 67 LENNAKIIVVACNTGTTNAISYLRNKYKEVPFIGIEPAIKPASLQSVTKKIGVLATRSTL 126
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + ++ + V+ G +IK E+ + + +
Sbjct: 127 ASDLFAKTSEHLKQEEQVEIIEQ-VGEGLVDLIEAG-RIKSPEMTLLLRKYLLPMIAEGI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
D +VL CTHYP ++ ++L P + +D+ ++A++ R +L +
Sbjct: 185 DYLVLGCTHYPYLLPQIQELIPPHIKVIDSGYAVAKQTRNILSQ 228
>gi|315652855|ref|ZP_07905828.1| glutamate racemase [Eubacterium saburreum DSM 3986]
gi|315484886|gb|EFU75295.1| glutamate racemase [Eubacterium saburreum DSM 3986]
Length = 269
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V +++ MP +Y D PYG+ + K + + + K
Sbjct: 8 IGVFDSGVGGLTVAREIISQMPNEGIVYFGDTARVPYGSKSKDTVIKYSRQIVNFLQTKN 67
Query: 76 QPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ VIACNTA ++K E+ + GA+ A K T+ G I ++ T T
Sbjct: 68 VKAI-VIACNTASAFALDILKTEINIPIIGVIHAGAITATKT----TKVGRIGVVGTNGT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEGK 190
+ IH S+ + + +L VEE + D + EI ++ E + +
Sbjct: 123 ISSGIYEKTIHEINSELEVIQKACPLLVPLVEE-----GLINDSVTDEIISRYVSELKSR 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTHYPL+ + FR++ V ++ + A+ + LL R N
Sbjct: 178 HIDSLVLGCTHYPLLYNTFRRIMGEGVSLVNPAYETAKELKSLLIREN 225
>gi|187917978|ref|YP_001883541.1| glutamate racemase [Borrelia hermsii DAH]
gi|119860826|gb|AAX16621.1| glutamate racemase [Borrelia hermsii DAH]
Length = 254
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L++ I+IFDSGIGGL + + +++Y+AD+ FPYG L K ++ L
Sbjct: 3 NLEDVIVIFDSGIGGLSYFEYISKRFVNRNYVYIADNKNFPYGEKSPEFLLKEILELVLK 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ Y VIACNTA + D+L FP + L +V +++ A + +++T +
Sbjct: 63 LEQMYNIASIVIACNTASISVYDKLNLRFPIIYTLPSVGLVEELAC----KRVILIATSS 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLV--SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + +CH +L+ S+ L + VE G + KED ++ + +E E
Sbjct: 119 TINSEFVQR-----EKKCHWNLILKSASELVNFVEY---GDRFKEDALRY-LRALQLEVE 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLP 235
R D++ L CTHY I + PV +N + +A A+ L P
Sbjct: 170 ANRRDMVFLGCTHYLHIKDMIESFLGIPV--YENRELVANELAKVLGP 215
>gi|325125275|gb|ADY84605.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 261
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL ++ L+P +++ D PYG E + L KR++ +++
Sbjct: 10 IGVFDSGQGGLTVLSRLVDLIPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVV---DELI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL
Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + V + L +E+ + I + +E GK
Sbjct: 126 EQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYVGKAA 181
Query: 193 DVIVLACTHYPLIVHVFRQL 212
V VL CTH+P +++
Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200
>gi|117926510|ref|YP_867127.1| glutamate racemase [Magnetococcus sp. MC-1]
gi|117610266|gb|ABK45721.1| glutamate racemase [Magnetococcus sp. MC-1]
Length = 272
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ + P+ FIY+ D PYG + +R +D L ++
Sbjct: 11 IGIFDSGVGGLTVLRTLARRFPQESFIYLGDTARVPYGTKSPRTV-ERYTLQVADHLQRH 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLISILSTPATLRR 134
V ACNTA L LR+ P + G VP + A TQ+G + ++ T AT
Sbjct: 70 GVKGVVAACNTASALGLGALRAHQPKLPVQGVIVPGCRSALNVTQTGRVGVIGTRAT--- 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEKE---- 188
I S + ++L++ I V + AC + + E+ I +E
Sbjct: 127 ------ISSGAYRTTLNLLNPTI---EVSDIACPLFVPLAEEGWTHHAATEMIVRETLTP 177
Query: 189 --GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D ++L CTHYP++ V +++ V +D+++++A
Sbjct: 178 LLDSDIDTLILGCTHYPVLKEVIQKVMGEGVMLVDSAEAVA 218
>gi|313680798|ref|YP_004058537.1| glutamate racemase [Oceanithermus profundus DSM 14977]
gi|313153513|gb|ADR37364.1| glutamate racemase [Oceanithermus profundus DSM 14977]
Length = 260
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 21/261 (8%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I +FDSG+GGL VL+ +R +P F+Y D PYG+ + L +R + S
Sbjct: 9 LEQPIGVFDSGVGGLTVLEALRRALPGRDFLYFGDTARVPYGS-KPPELVRRFAWEISGF 67
Query: 72 LDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + V V+ACNTA ++ + D R P + PA+ +A Y G+I +T A
Sbjct: 68 LLRQGAVALVVACNTASSVALADLARLGVPVTGVID--PAVAEAERYGHVGVIGTRATVA 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ Y S L + +++ + VEE + D + + + ++E
Sbjct: 126 S--GAYQSRL---EARGKRVWSLATPLFVPIVEE-----GLWSDGVAELVARHYLEGAPD 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ ++L CTHYP + + +L P + +D+++ AR LP RV
Sbjct: 176 DLEALILGCTHYPYLKPLLERLRPG-LTLIDSAEPTARAVARSLP-AGPGSGRVVH---- 229
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
+++G P+ A R L G+ +
Sbjct: 230 YVTGDPE-AYRALAARLGVPA 249
>gi|300811367|ref|ZP_07091863.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497602|gb|EFK32628.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 261
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL ++ LMP +++ D PYG E + L KR++ +++
Sbjct: 10 IGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVV---DELI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++T TL
Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATSLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + V + L +E+ + I + +E GK
Sbjct: 126 EQDKFNQLVAECAEPGQVAKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPYAGKAA 181
Query: 193 DVIVLACTHYPLIVHVFRQL 212
V VL CTH+P +++
Sbjct: 182 GV-VLGCTHFPFAKQAIQEI 200
>gi|309782392|ref|ZP_07677116.1| glutamate racemase [Ralstonia sp. 5_7_47FAA]
gi|308918729|gb|EFP64402.1| glutamate racemase [Ralstonia sp. 5_7_47FAA]
Length = 282
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 6/218 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAERTLRVCEW 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+T +
Sbjct: 64 LVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ C + L +E + + +
Sbjct: 122 TLRSEKFARLLAGASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLRAYLQPMLDA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYP + +++ + +D ++AR
Sbjct: 178 NADTLVLGCTHYPFLEDAIHEIAGDRLTLIDTGHAVAR 215
>gi|302380932|ref|ZP_07269394.1| glutamate racemase [Finegoldia magna ACS-171-V-Col3]
gi|302311310|gb|EFK93329.1| glutamate racemase [Finegoldia magna ACS-171-V-Col3]
Length = 261
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 19/226 (8%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++K N I DSG+GGL V +K++ LMP +IY AD PYG+ +++++ +
Sbjct: 4 KQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGS----KTREQMIKIS 59
Query: 69 SDIL---DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLIS 124
+I+ ++ Q L V+ACNT ++ +RS + +G V +K A T + +
Sbjct: 60 ENIVRFFNEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQTTSNKKVG 118
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMIL--ASRVEEYACGIKIKEDEIKKEIEG 182
++ST AT+ + L + Q I + S L VEE C K ++I K++E
Sbjct: 119 VISTKATV----DNGLYKKLLEQNDIGVCQSACLDFVGFVEE-DCKDK---EKILKKVEE 170
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D I+L CTHYP+++ ++ + + ++D +DS++
Sbjct: 171 YLKPIVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSE 216
>gi|55822242|ref|YP_140683.1| glutamate racemase [Streptococcus thermophilus CNRZ1066]
gi|116627188|ref|YP_819807.1| glutamate racemase [Streptococcus thermophilus LMD-9]
gi|81559855|sp|Q5M1I5|MURI_STRT1 RecName: Full=Glutamate racemase
gi|122268209|sp|Q03MG1|MURI_STRTD RecName: Full=Glutamate racemase
gi|55738227|gb|AAV61868.1| glutamate racemase [Streptococcus thermophilus CNRZ1066]
gi|116100465|gb|ABJ65611.1| glutamate racemase [Streptococcus thermophilus LMD-9]
Length = 271
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 16/248 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K ++ VIACNTA ++ +E++ + + LG V P A ++SG
Sbjct: 53 YTWQLVKFLLTKDVKMI-VIACNTATAVVWEEIKESL-DIPVLGVVLPGSSAAIKSSRSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I Q ++ +S A VE + + + + +
Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMA 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----DRVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDDHA 249
+R D
Sbjct: 226 SREVKDKT 233
>gi|227540150|ref|ZP_03970199.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33300]
gi|227240011|gb|EEI90026.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33300]
Length = 275
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 27/239 (11%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WED-HALKKRLMFL 67
L NS I +FDSG GGL V ++++ +PEY +IY+ D+ PYGN +E + K +F
Sbjct: 6 LHNSPIGVFDSGYGGLSVFKEIKKELPEYDYIYLGDNARIPYGNRSFETVYQFTKECVFK 65
Query: 68 FSDILDKYQPVLSVIACNTAF--TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124
D+ L ++ACNTA L + P LG + P + YT + I
Sbjct: 66 LFDLGCD----LVILACNTASAKALRSIQQHDLPPGKKVLGVIRPTTEIIKEYTTTNKIG 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
IL+T T++ I+ + + + VE +EI E F
Sbjct: 122 ILATTGTVKSESYKIEINKFYPEIEVFQHDCPFWVPLVE---------NNEIDTEGARYF 172
Query: 185 IEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+EK + D IVLACTHYPL++ V +Q P + + +A + L R
Sbjct: 173 VEKDIHELLSQSSDIDTIVLACTHYPLLLPVIKQFVPPHIQIISQGPIVAHSLKNYLER 231
>gi|296136513|ref|YP_003643755.1| glutamate racemase [Thiomonas intermedia K12]
gi|295796635|gb|ADG31425.1| glutamate racemase [Thiomonas intermedia K12]
Length = 263
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 8/216 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P+ IYVAD PYG+ D L++R + ++ +
Sbjct: 7 IGVFDSGVGGLTVLRALRAQLPQASLIYVADSAHAPYGDRPDDFLQQRARQITRFLIGQG 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA LR+ F + F+G P IK A A + + + +L+TP+TLR
Sbjct: 67 A-RLIVVACNTATAAAIAALRAEF-DLPFVGIEPGIKPALARSDARRVGVLATPSTLRSA 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+H++ + L LA VE ++ ++++ I D +
Sbjct: 125 KFRALLHTHAAAAEPVLQPCPGLADAVERG----DLQAPQVQQLIRQFCAPLRTAGCDTV 180
Query: 196 VLACTHYPLIVHVFR-QLSPWPVDWLDNSDSIARRA 230
VL CTHYPL+ + +L P V LD ++ +AR+A
Sbjct: 181 VLGCTHYPLLAEQIQAELGPQ-VHLLDTAEPVARQA 215
>gi|205374388|ref|ZP_03227186.1| glutamate racemase [Bacillus coahuilensis m4-4]
Length = 264
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 25/233 (10%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I I DSG+GGL V++++ +P YV D PYG ++ + ++
Sbjct: 1 MNKPIGIIDSGVGGLTVVKEVMRQLPNERIYYVGDTARCPYGPRHTDEVRT-FTWELTNY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + +IACNTA ++ DE++ S+ +G + P + A +T+SG I +L T
Sbjct: 60 LLQYDIKMLIIACNTATAVVLDEIKHKL-SIPVIGVIDPGARAAIKHTKSGRIGVLGTNV 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + S VE E G F EK K
Sbjct: 119 TVKSKAYDRALRTINRDVQVWSKSCPKFVPLVE-------------SGEYTGSFAEKIVK 165
Query: 191 RT---------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
T D I+L CTHYPL+ + + + V + + D AR A +L
Sbjct: 166 NTLQSMKQHPLDTIILGCTHYPLLEPIIQDVMGSNVKVISSGDETAREASAIL 218
>gi|169350167|ref|ZP_02867105.1| hypothetical protein CLOSPI_00911 [Clostridium spiroforme DSM 1552]
gi|169292950|gb|EDS75083.1| hypothetical protein CLOSPI_00911 [Clostridium spiroforme DSM 1552]
Length = 261
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I +FDSG+GGL VL ++ L+P + IY+ D+ PYG+ L K +
Sbjct: 1 MERAIGVFDSGVGGLTVLNSIKSLLPNENIIYIGDNYHCPYGDKTPAQLFKYASGIVEYF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ K L V+ACNT + + + L+ T+P + +G + A + I++T AT
Sbjct: 61 I-KQNVKLIVLACNTTSSTVLERLQMTYPEVMIIGVIDATVNDFINRKVANTLIIATVAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEG 189
++ I S+ +++ L VE +Y GI +I ++++
Sbjct: 120 IKSNKYPETIKQIDSKIETFSLATPKLVPLVESGKYKEGI--------YDILHEYLDEYK 171
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+R I+L CTHYP++ + P ++++ +S++I++ + +L R
Sbjct: 172 ERIQSIILGCTHYPILKEQIENVLP-NIEYVSSSEAISKSVKDILLR 217
>gi|298207461|ref|YP_003715640.1| Glutamate racemase [Croceibacter atlanticus HTCC2559]
gi|83850097|gb|EAP87965.1| Glutamate racemase [Croceibacter atlanticus HTCC2559]
Length = 263
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 8/229 (3%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+QN+ I IFDSG+GG + +++ L+P IY+AD PYG + + L +
Sbjct: 1 MQNNAPIGIFDSGVGGTSIWREIHQLLPLEQTIYLADSKYAPYGEKTKDEIVE-LSIKNT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + ++ACNTA T LR+ + ++ + PAIK AA T++ + IL+T
Sbjct: 60 EKLISLGAKVIIVACNTATTNAIKHLRANY-TLPIIAIEPAIKPAALNTKTKAVGILATQ 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + Y I V L +E K E+++ ++
Sbjct: 119 GTLNSELFTQTSELYARDIDIIEVFGKGLVPEIEAGRQDGK----EVERLLKLYLKPMLD 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
K D +VL C+HYP ++ ++L P V +D+ ++AR+ + +L N
Sbjct: 175 KNIDYLVLGCSHYPYLIPKLKELLPKTVTIIDSGLAVARQTKAVLEHYN 223
>gi|251796096|ref|YP_003010827.1| glutamate racemase [Paenibacillus sp. JDR-2]
gi|247543722|gb|ACT00741.1| glutamate racemase [Paenibacillus sp. JDR-2]
Length = 271
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 8/249 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q I I DSG+GGL V +++ +P +Y D PYG D + R D
Sbjct: 3 VQQPIAILDSGVGGLTVAREVMRQLPREKIVYFGDTARAPYGP-RDPKIVTRFTREIVDY 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +++P + VIACNTA +E+R+ + +G + P + A T +G I ++ T
Sbjct: 62 LIQFRPKMIVIACNTATAFALEEIRAIV-DIPVVGVIKPGARAALGRTITGCIGVIGTEG 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + H+ + + VE+ + + + I
Sbjct: 121 TIKSGAYEHALLEISPDVHVISEACPLFVPLVEKG----NFRSLQTYETIRSSIGHLRKF 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
D ++L CTHYP + V +++ ++ + ++D AR +L + + H
Sbjct: 177 PMDSLILGCTHYPFLADVIQEVVGPDINLISSADETAREVSDILQDQGMLSRGEILPVHQ 236
Query: 250 LFLSGKPDI 258
F SG+P +
Sbjct: 237 FFCSGEPQM 245
>gi|149183306|ref|ZP_01861747.1| glutamate racemase [Bacillus sp. SG-1]
gi|148848999|gb|EDL63208.1| glutamate racemase [Bacillus sp. SG-1]
Length = 266
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 7/224 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I I DSG+GGL V +++ +P Y+ D PYG +KK + +
Sbjct: 1 MDQPIGIIDSGVGGLTVAKEVMRQLPNETIFYLGDTARCPYGPRTAEEVKK-FTWEMAAF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L Y + VIACNTA ++ +EL+ P + +G + P + A ++Q+G I +L T
Sbjct: 60 LMNYNIKMLVIACNTATAVVLEELQDMLP-IPVVGVIQPGARAALKHSQNGRIGVLGTVG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ IHS + ++ VE K D + + + +
Sbjct: 119 TVNSKAYDKAIHSINDSIDVTSLACPKFVPLVESGEYESKWAVDIVNE----TLVHMREE 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYPL+ + + + V +++ D AR +L
Sbjct: 175 PIDTLILGCTHYPLLQPIVQTVMGQEVKVINSGDETAREVSAIL 218
>gi|187929182|ref|YP_001899669.1| glutamate racemase [Ralstonia pickettii 12J]
gi|229486249|sp|B2U6V5|MURI_RALPJ RecName: Full=Glutamate racemase
gi|187726072|gb|ACD27237.1| glutamate racemase [Ralstonia pickettii 12J]
Length = 282
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 6/218 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEYIADRTLRVCEW 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+T +
Sbjct: 64 LVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ C + L +E + + +
Sbjct: 122 TLRSEKFARLLAGASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLRAYLQPMLDA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYP + +++ + +D ++AR
Sbjct: 178 NADTLVLGCTHYPFLEDAIHEIAGDRLTLIDTGHAVAR 215
>gi|115352286|ref|YP_774125.1| glutamate racemase [Burkholderia ambifaria AMMD]
gi|115282274|gb|ABI87791.1| glutamate racemase [Burkholderia ambifaria AMMD]
Length = 287
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 7/221 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + + L
Sbjct: 16 GPVGLFDSGLGGLSVLRAVRAHLPGESFVYVADSQHAPYGPRDEAFITERTLAI-GEWLA 74
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ VIACNTA +R S+ +G P IK AAA + +G+ +L+T +TL
Sbjct: 75 REGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSTTGVAGVLATQSTLN 133
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ Y + L +E ++ +E D
Sbjct: 134 SPRFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRTLLERYLQPMLDDGAD 189
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
+VL CTHYP R + + +D SD+IAR+ AR L
Sbjct: 190 TLVLGCTHYPFFTETIRDIVGDRLTIVDTSDAIARQLARVL 230
>gi|213961790|ref|ZP_03390056.1| glutamate racemase [Capnocytophaga sputigena Capno]
gi|213955579|gb|EEB66895.1| glutamate racemase [Capnocytophaga sputigena Capno]
Length = 271
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 9/222 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL---FSDIL 72
I +FDSG+GG + +++ LMP +++AD+ PYG K+ ++ L + L
Sbjct: 11 IGLFDSGVGGTTIWKEINALMPNESTLFLADNKNAPYG----EKTKEEIITLCDANTQFL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL
Sbjct: 67 LAQKAKIIVVACNTGTTNAISYLRNKYKDVPFIGIEPAIKPASLQSVTKKIGVLATRSTL 126
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + ++ + V+ G +I+ E+ + + +
Sbjct: 127 ASDLFAKTSEHLKQEEQVEIIEQ-VGEGLVDLIEAG-RIESPEMTQLLRHHLLPMVALGI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYP ++ +QL P + +D+ ++A++ R +L
Sbjct: 185 DYLVLGCTHYPYLLPQIQQLIPARIKVIDSGYAVAKQTRNIL 226
>gi|294340641|emb|CAZ89033.1| putative Glutamate racemase [Thiomonas sp. 3As]
Length = 263
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 111/214 (51%), Gaps = 8/214 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+ +R +P+ IYVAD PYG+ D L++R + ++ +
Sbjct: 9 VFDSGVGGLTVLRALRAQLPQVSLIYVADSAHAPYGDRPDDFLQQRARQITRFLIGQGA- 67
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA LR+ F + F+G P IK A A + + + +L+TP+TLR
Sbjct: 68 RLIVVACNTATAAAITALRAEF-DLPFVGIEPGIKPALARSDARRVGVLATPSTLRSAKF 126
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+H++ + L LA VE ++ ++++ I D +VL
Sbjct: 127 RALLHTHAAAAEPVLQPCPGLADAVERG----DLQAPQVQQLIRQFCAPLRTAGCDTVVL 182
Query: 198 ACTHYPLIVHVFR-QLSPWPVDWLDNSDSIARRA 230
CTHYPL+ + +L P V LD ++ +AR+A
Sbjct: 183 GCTHYPLLAEQIQAELGPQ-VHLLDTAEPVARQA 215
>gi|170703387|ref|ZP_02894167.1| glutamate racemase [Burkholderia ambifaria IOP40-10]
gi|170131707|gb|EDT00255.1| glutamate racemase [Burkholderia ambifaria IOP40-10]
Length = 287
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 1 MKIDNYPCEKKLQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + + P ++ + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++
Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSHHAPYGPRDEA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L + VIACNTA +R S+ +G P IK AAA +
Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+G+ +L+T +TL L+ Y + L +E ++
Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
+E D +VL CTHYP R + + +D SD+IAR+ AR L
Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLMIVDTSDAIARQLARVL 230
>gi|78188551|ref|YP_378889.1| glutamate racemase [Chlorobium chlorochromatii CaD3]
gi|78170750|gb|ABB27846.1| glutamate racemase [Chlorobium chlorochromatii CaD3]
Length = 267
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 6/223 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+N I IFDSGIGGL V++ ++ +P IY D PYG ++K S IL
Sbjct: 4 ENPIGIFDSGIGGLTVVKAIQAALPSERIIYFGDTARVPYGPKSQVTIRKYAAD-DSAIL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+YQP L ++ACNT L D + S+ LG + A A +++G I ++ T AT
Sbjct: 63 MRYQPKLIIVACNTVSALALDVVEKCCGSVPVLGVLKAGASLAVQASRNGRIGVIGTQAT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I+ + + + EE G I+ D E
Sbjct: 123 VCSNAYACAINQQAPDYEVTSKACPLFVPLAEE---GF-IEHDATALIAEHYLAPLRTHN 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYP++ +V + + +D+++++A +A +L
Sbjct: 179 IDTLVLGCTHYPILRNVIERTIGSNIRIIDSAEAVALQAGEML 221
>gi|303326014|ref|ZP_07356457.1| glutamate racemase [Desulfovibrio sp. 3_1_syn3]
gi|302863930|gb|EFL86861.1| glutamate racemase [Desulfovibrio sp. 3_1_syn3]
Length = 276
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 6/235 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL+ + +P +Y+ D PYG + + + ++D+
Sbjct: 9 VALFDSGVGGLTVLKALADRLPGEDLLYLGDTARLPYGTKGRETITRYTLLAARKLVDRG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+L V+ACNTA LR F + +G V P + AA +++G I +++T AT+
Sbjct: 69 AKML-VVACNTATAAALPALREHFAPLPVVGVVEPGARAAARTSRNGEIVVIATEATITG 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTD 193
I + H+ + + EE + E ++ +E F R D
Sbjct: 128 GAYQQAITRIRPEAHVRGRACTLFVPMAEEGWMDGPLVEGIARRYLEDMFTPAVTAPRPD 187
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
++L CTH+PL+ + + V +D++ + A L R++ +T D+H
Sbjct: 188 TLLLGCTHFPLLQAALQNVVGPQVRIVDSAATTAESVEEELTRLDLLRT---DEH 239
>gi|251794653|ref|YP_003009384.1| glutamate racemase [Paenibacillus sp. JDR-2]
gi|247542279|gb|ACS99297.1| glutamate racemase [Paenibacillus sp. JDR-2]
Length = 258
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 8/231 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I IFDSG+GGL VL + +P ++IY+AD PYG + ++ ++ ++ +
Sbjct: 2 TIGIFDSGLGGLTVLAEALKRLPAENYIYMADTKHVPYGTKSEEEVRDFVLQTVEQMVAE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
L V+ACNTA ++ +ELR + S +G PA+K A ++ +L +TP TL
Sbjct: 62 GIDAL-VVACNTATSIAINELRERY-SFPIIGMEPAVKPAVEMNRATGKKVLVWATPLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ S V + I V S+ + V +Y ++ +D +K +
Sbjct: 120 RMPKYYALV-SRVDEEGI--VDSLPMPELV-QYCEALQFDKDVLKDYFLAKLAPYDLNEY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
++VL CTH+P + R + P + ++ + RR +L R R
Sbjct: 176 GILVLGCTHFPFYTSILRNVLPPHIQIVNGNLGTIRRLTAMLSRYGIGTGR 226
>gi|312277667|gb|ADQ62324.1| Glutamate racemase [Streptococcus thermophilus ND03]
Length = 271
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 16/248 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K ++ VIACNTA ++ +E++ + LG V P A ++SG
Sbjct: 53 YTWQLVKFLLTKDVKMI-VIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSRSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I Q ++ +S A VE + + + + +
Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMA 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----DRVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDDHA 249
+R D
Sbjct: 226 SREVKDKT 233
>gi|55820352|ref|YP_138794.1| glutamate racemase [Streptococcus thermophilus LMG 18311]
gi|81561031|sp|Q5M627|MURI_STRT2 RecName: Full=Glutamate racemase
gi|55736337|gb|AAV59979.1| glutamate racemase [Streptococcus thermophilus LMG 18311]
Length = 271
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 16/248 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPYESIVYIGDSARAPYGPRPAGQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K ++ VIACNTA ++ +E++ + + LG V P A ++SG
Sbjct: 53 YTWQLVKFLLTKDVKMI-VIACNTATAVVWEEIKESL-DIPVLGVVLPGSSAAIKSSRSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I Q ++ +S A VE + + + + +
Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMA 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----DRVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDDHA 249
+R D
Sbjct: 226 SREVKDKT 233
>gi|144900285|emb|CAM77149.1| Asp/Glu racemase [Magnetospirillum gryphiswaldense MSR-1]
Length = 284
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 16/226 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE-----DHALKKRLMFLFSD 70
I +FDSG+GGL V + +P +Y+ D PYG + L+ F D
Sbjct: 21 IGVFDSGVGGLTVAAALHRRLPAETLLYLGDVARLPYGTKAPQTIIQYVLRAAAFFRSHD 80
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129
I + V+ACNTA L FP + LG + A +QAAA + G I + +T
Sbjct: 81 I------KMLVLACNTASAHAAAALAQHFPDLLVLGVIDAGAEQAAAQSPGGRIVVAATE 134
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T R I + I V + + VEE I E I++ + F + +G
Sbjct: 135 GTCRSGAFDRAIAVHRPTAAITPVPCPLFVALVEEGLTEGPIAEAMIRQYLAEHF-QGDG 193
Query: 190 KRTDVIVLACTHYPLIVHVFRQ-LSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+PL+ R+ L P PV +D + ++A RA +L
Sbjct: 194 A-ADCLVLGCTHFPLLAPSLRKVLGPIPV-LVDCAQAVAERAALML 237
>gi|169824250|ref|YP_001691861.1| glutamate racemase [Finegoldia magna ATCC 29328]
gi|167831055|dbj|BAG07971.1| glutamate racemase [Finegoldia magna ATCC 29328]
Length = 261
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 19/226 (8%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++K N I DSG+GGL V +K++ LMP +IY AD PYG+ +++++ +
Sbjct: 4 KQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGS----KTREQMIKIS 59
Query: 69 SDIL---DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLIS 124
+I+ ++ Q L V+ACNT ++ +RS + +G V +K A T + +
Sbjct: 60 ENIVRFFNEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQTTSNKKVG 118
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMIL--ASRVEEYACGIKIKEDEIKKEIEG 182
+++T AT+ + L + Q I + S L VEE C K ++I K++E
Sbjct: 119 VIATKATV----DNGLYKKLLEQNDIEVCQSACLDFVGFVEE-DCKDK---EKILKKVEE 170
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D I+L CTHYP+++ ++ + + ++D +DS++
Sbjct: 171 YLKPIVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSE 216
>gi|258544909|ref|ZP_05705143.1| glutamate racemase [Cardiobacterium hominis ATCC 15826]
gi|258519829|gb|EEV88688.1| glutamate racemase [Cardiobacterium hominis ATCC 15826]
Length = 272
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ LQN I +FDSG+GGL V++ + +P H IY D PYG ++ +
Sbjct: 5 ETLQNRPIGVFDSGVGGLTVVRALMERLPLEHLIYYGDTARVPYGVKSRATIETYSAQIV 64
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILS 127
+L + L VIACNT + D +R+ + L + A QAA T Q+ I++++
Sbjct: 65 EYLLAQRVKAL-VIACNTIAAVAGDSIRAQARGLPVLDVITAGAQAALQTSQNHHIAVIA 123
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + IH++ Q + + +L VEE + +++ ++ +
Sbjct: 124 TNTTVNSNAYARAIHAHDPQARVQSQACPLLVPLVEEGWLEHDVTRLTVREYLKPILADD 183
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSP 214
D +VL CTHYPL+ + R+ +P
Sbjct: 184 ----ADTLVLGCTHYPLLKPLLREEAP 206
>gi|184200646|ref|YP_001854853.1| glutamate racemase [Kocuria rhizophila DC2201]
gi|183580876|dbj|BAG29347.1| glutamate racemase [Kocuria rhizophila DC2201]
Length = 297
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 13/250 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + +P +YV D PYG ++ + + D++
Sbjct: 14 NSPIGVFDSGVGGLTVARSIIDQLPNEEILYVGDTANGPYGPLPIAQVRSNALRIMDDLV 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILST 128
D +L VIACNTA + + R + S+ + PA+++A A T+SG + ++ T
Sbjct: 74 DSGVKLL-VIACNTASAAVLRDARERYTRGYSIPVTEVIQPAVRRAVATTRSGRVGVIGT 132
Query: 129 PATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT+ R Y N + Q I V+ VE G+ + + E K
Sbjct: 133 EATIGSRAY--NDTFAAAPQLEITSVACPAFVEYVER---GVTSGPELLSTAQEYLQPLK 187
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFD 246
+ + D +VL CTHYPL+ V + V+ + +++ AR R LL +
Sbjct: 188 DAQ-VDTLVLGCTHYPLLTAVISYVMGESVNLVSSAEETARDVYRSLLDNGLERDPSLAP 246
Query: 247 DHALFLSGKP 256
H +G P
Sbjct: 247 HHEFLATGDP 256
>gi|331701298|ref|YP_004398257.1| glutamate racemase [Lactobacillus buchneri NRRL B-30929]
gi|329128641|gb|AEB73194.1| Glutamate racemase [Lactobacillus buchneri NRRL B-30929]
Length = 264
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 15/233 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+++ ++P +I++ D PYG ++K
Sbjct: 1 MDNRP--------IGVMDSGVGGLTVLKEITKILPNESYIFIGDQANLPYGQKSSETVRK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +D L + + VIACNTA + L+ P + +G + P + A ++SG
Sbjct: 53 -LTKRIADYLVEQNIKMFVIACNTATAAAYEYLKKILP-IPVIGVIEPGAQMAVEASKSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T T+R LI + + + VEE G + + +
Sbjct: 111 EIGVIATNGTVRSGDYQRLIKQANRSAVVSSLGCPEFVTMVEEGLAGTVEAQVAVNNRL- 169
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
F++K D +V+ CTH+P++ + + + V +D + A++ + L
Sbjct: 170 AWFMDKP---IDTLVMGCTHFPILKNEIQNVMGNAVTLIDPGVATAQQVKAKL 219
>gi|225849254|ref|YP_002729418.1| glutamate racemase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644018|gb|ACN99068.1| glutamate racemase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 260
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 7/230 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI IFDSGIGGL V +++ P+ Y+ D PYGN + + + + +
Sbjct: 2 SIGIFDSGIGGLTVFKEVAENFPKADIYYLGDTARVPYGNKSKETIIRYSIECATYLYHN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ L +IACNTA + + L+ P + +G V P + A YT++ + ++ T AT++
Sbjct: 62 FNVDLLIIACNTASSYAIETLKKILP-IPIIGVVKPGAEAAIRYTKNKKVGVIGTVATVK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
N + + + I+ + VEE ++ +K+ ++ IE K D
Sbjct: 121 SQSYVNELKNLDNSLEIYQKPCPLFVPLVEEGWIDNEVARLTVKEYLQE-LIE---KGID 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
++L CTHYPL+ + + L P ++ +D+S +I + L N + R
Sbjct: 177 TLILGCTHYPLLKNTIKSLYPH-LNIVDSSIAIVDHIKNLNLTFNGNGVR 225
>gi|218291114|ref|ZP_03495129.1| glutamate racemase [Alicyclobacillus acidocaldarius LAA1]
gi|218238925|gb|EED06133.1| glutamate racemase [Alicyclobacillus acidocaldarius LAA1]
Length = 281
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 15/254 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL V M+ +P +Y D PYG+ + + +R L
Sbjct: 5 HRPIGVFDSGIGGLTVFHAMKRRLPHESMVYFGDRARCPYGDRDPQEV-ERFALEIGRYL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ L V+ACNTA + L+ + +G + P QA +++G I ++ T T
Sbjct: 64 ECLGIKLLVVACNTATAVALPRLKEEL-GIEVVGVIEPGASQAIEASETGRIGVIGTSVT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ ++ + + + V+ + VE+ ++ D ++ + +R
Sbjct: 123 VSSHAYADALRALRPDVSVIEVACPLFVPLVEQG----HVEGDAVEAVVHESLQPLLQER 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPRINTHQTRVFDDH-- 248
D +VL CTHYPL++ V R++ + + ++D+ A+R AR L R DDH
Sbjct: 179 IDTLVLGCTHYPLLMPVIRRVLGPAIRVISSADATAQRVARLLAER----GLEAPDDHVP 234
Query: 249 -ALFLSGKPDIAMR 261
A FL+ ++R
Sbjct: 235 DACFLTTGDTTSLR 248
>gi|332800387|ref|YP_004461886.1| glutamate racemase [Tepidanaerobacter sp. Re1]
gi|332698122|gb|AEE92579.1| Glutamate racemase [Tepidanaerobacter sp. Re1]
Length = 269
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 18/249 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK----RLMFLFSDI 71
I +FDSGIGGL V ++ L+P+ + +Y D PYG + + L FL
Sbjct: 8 IGVFDSGIGGLTVAGEIMKLLPKENIVYFGDTARVPYGPKSSEVVTQFAFEGLRFLLGKD 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ L VIACNT D+L ++ P + +G + P + A A T++ ++ ++ T
Sbjct: 68 VK-----LIVIACNTVSATCLDKLCASSP-VPVIGVIEPGARAAVAATENQVVGVIGTER 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ IH+ Q IH + + VEE E+E ++E K
Sbjct: 122 TIKSCAYERAIHALNKQIKIHSKACPLFVPLVEEGWL-----ENEAAFYTAKTYLESLKK 176
Query: 191 R-TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDH 248
+ D +VLACTHYPL+ ++ V +D++ AR R L+ + Q +
Sbjct: 177 QGIDTLVLACTHYPLLKLTLGKVMGETVRLVDSAWETAREVQRILIDKNLKRQDNSPAFY 236
Query: 249 ALFLSGKPD 257
F+S P+
Sbjct: 237 QYFVSDNPE 245
>gi|119356253|ref|YP_910897.1| glutamate racemase [Chlorobium phaeobacteroides DSM 266]
gi|166231032|sp|A1BDJ6|MURI_CHLPD RecName: Full=Glutamate racemase
gi|119353602|gb|ABL64473.1| glutamate racemase [Chlorobium phaeobacteroides DSM 266]
Length = 272
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 16/228 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD-- 70
++ I IFDSG+GGL V++ ++ MP IY D PYG ++K + D
Sbjct: 9 ESPIGIFDSGVGGLTVVRAIQAEMPAERIIYFGDTARVPYGTKSPATIRK---YAHEDTA 65
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTP 129
IL + P + ++ACNT L D + T S+ +G + A A T++ + ++ T
Sbjct: 66 ILMSHLPKIIIVACNTVSALALDVVEKTAGSIPVIGVLKAGADLAVQVTRNKHVGVIGTQ 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT+ ++ I + +I +VS + EE E + I ++
Sbjct: 126 ATVSSNAYADAI--TLLDANIEVVSKACPLFVPLAEE-----GFTEHAATRLIASDYLAA 178
Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+G D +VL CTHYP++ HV + + +D+++++A R R LL
Sbjct: 179 FDGHDIDTLVLGCTHYPILRHVITETLHRDIRIIDSAEAVAGRTRKLL 226
>gi|82702343|ref|YP_411909.1| glutamate racemase [Nitrosospira multiformis ATCC 25196]
gi|82410408|gb|ABB74517.1| glutamate racemase [Nitrosospira multiformis ATCC 25196]
Length = 268
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 14/220 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VLQ ++ P+ ++Y+ D PYG +++ L IL Y
Sbjct: 9 IAVFDSGIGGLTVLQALKKRYPQESYVYLGDTARLPYGTKSPEIVQRYSQSL-CRILLNY 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
P VIACNTA T + +R+ + +G + PA A T++ I +++T T+R
Sbjct: 68 NPSAIVIACNTASTHALEAVRALAAPLPVIGMIEPAAAAAIQATKNQHIGVIATFGTIR- 126
Query: 135 TYTSNLIHSYVSQCHIHLVSS-----MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
S + + + + H+ +S M++A E ++ G I +++ ++ F E
Sbjct: 127 ---SGVYEKELKKINPHIKASSQACQMLVALAEEGWSSG-PIATAIVRQYLDPIFDTAEA 182
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D ++L CTH+P+ +FR + V +++ ++ A +
Sbjct: 183 P--DTLILGCTHFPVFEALFRDILGSSVTLINSGEAAATQ 220
>gi|118579835|ref|YP_901085.1| glutamate racemase [Pelobacter propionicus DSM 2379]
gi|118502545|gb|ABK99027.1| glutamate racemase [Pelobacter propionicus DSM 2379]
Length = 272
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 11/225 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI IFDSG+GGL VL+++ MP+ IY D PYG + R + L +
Sbjct: 5 SIGIFDSGVGGLTVLREIIKAMPQEDTIYFGDTARVPYGTKSPETV-IRYAHEITSFLVR 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
L V+ACNT + + L+ FP + +G + P K+A ++SG I ++ T T++
Sbjct: 64 RDIKLLVVACNTVSAVALNGLKRHFP-IPVVGVIEPGAKRAVEVSRSGRIGVIGTAGTIK 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEGKR 191
+ S I +Q + + + EE ++++ + +++ KE
Sbjct: 123 SSAYSRAIKRLNAQAEVLTRACPLFVPLAEEGWI-----DNQVARLTAQSYLQDLKEAG- 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
D +VL CTHYPL+ + + V +D+++ AR +L R
Sbjct: 177 VDTLVLGCTHYPLLKPLICETMGPDVTLVDSAEETARSVAEILSR 221
>gi|294500374|ref|YP_003564074.1| glutamate racemase [Bacillus megaterium QM B1551]
gi|294350311|gb|ADE70640.1| glutamate racemase [Bacillus megaterium QM B1551]
Length = 266
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 16/225 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL + P+ F+Y AD PYG + K + DIL +
Sbjct: 3 IGFFDSGIGGISVLNEAIKHFPKEDFLYYADTRNVPYGTRTKEEVNKHVQTAVEDILKQE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133
L VIACNTA ++ +ELRST+ + +G PA K A + S + + +T TL+
Sbjct: 63 VKAL-VIACNTATSISINELRSTY-DIPIIGMEPAAKPAIELSSSMDKRVLVFATDLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI----KKEIEGCFIEKEG 189
LI +V + L V E+ + D++ + ++EG + + G
Sbjct: 121 ELKYKKLITRIDKDS---IVDPLPLPELV-EFCEDLNFNWDKLSTYFRTKLEGFDLNQYG 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+P V + L P + +D S R LL
Sbjct: 177 ----TVVLGCTHFPYYKPVLKDLLPSHIQLIDGSKGTVERLSSLL 217
>gi|229543635|ref|ZP_04432695.1| glutamate racemase [Bacillus coagulans 36D1]
gi|229328055|gb|EEN93730.1| glutamate racemase [Bacillus coagulans 36D1]
Length = 269
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 110/254 (43%), Gaps = 18/254 (7%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V ++M +P YV D PYG +KK + +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEMMRQLPNETIYYVGDTARCPYGPRPVEEVKKFTWQMIRFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+DK Q + VIACNTA +I DE+R + LG + P + A +T++ I +L T
Sbjct: 61 MDK-QIKMLVIACNTATAVILDEVREEL-KIPVLGVIYPGARAALKHTKNFRIGVLGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIK-EDEIKKEIEGCFIEK 187
T++ + S + I ++ VE +Y I K E I+ C I
Sbjct: 119 TIKSQAYERALKSINKKVKITALACPKFVPLVESGQYNSPIAKKIVAETLYPIQNCGI-- 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
D ++L CTHYPL+ + + + V + + + AR LL N TR
Sbjct: 177 -----DTVILGCTHYPLLGPIIKNVMGAGVSVISSGEETAREVSTLLYFHDLFNMEDTR- 230
Query: 245 FDDHALFLSGKPDI 258
H + +G I
Sbjct: 231 -QKHRFYTTGSSKI 243
>gi|167755834|ref|ZP_02427961.1| hypothetical protein CLORAM_01350 [Clostridium ramosum DSM 1402]
gi|237734803|ref|ZP_04565284.1| glutamate racemase [Mollicutes bacterium D7]
gi|167704773|gb|EDS19352.1| hypothetical protein CLORAM_01350 [Clostridium ramosum DSM 1402]
gi|229382131|gb|EEO32222.1| glutamate racemase [Coprobacillus sp. D7]
Length = 261
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 113/229 (49%), Gaps = 20/229 (8%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I +FDSG+GGL VL +R L+P + IY+ D+ PYG +++L S+I
Sbjct: 1 MERAIGVFDSGVGGLTVLNSIRTLLPNENIIYIGDNYHCPYG----EKTREQLFSYASEI 56
Query: 72 LD---KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
++ K L V+ACNT + +EL++ + + +G + A + +++T
Sbjct: 57 VEYFIKENVKLIVLACNTTSATVLNELQAVYKEVLIIGVIDATVEDFISRGVDNTLVIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC---FI 185
AT+ + I Y + + + + L VE G+ KK+I ++
Sbjct: 117 AATINSHKYPDTIDCYQTGIEVFTLPTPKLVPLVE---AGMD------KKDIYDVLHEYL 167
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + I+L CTHYP++ + + + P ++++ +SD++ + R +L
Sbjct: 168 DSYAGKIKSIILGCTHYPILENQIKDILP-DIEYISSSDAVCKNVRDVL 215
>gi|227824990|ref|ZP_03989822.1| glutamate racemase [Acidaminococcus sp. D21]
gi|226905489|gb|EEH91407.1| glutamate racemase [Acidaminococcus sp. D21]
Length = 274
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 6/219 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I + DSG+GGL VL++++ LMP HFI++ D + PYGN + RL+ +D L
Sbjct: 4 QQPIGVIDSGVGGLTVLRRLQELMPHEHFIFLGDTLNTPYGNRSREDI-IRLVNQMTDYL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V ACNT L ++ +R+ +G K T++G I I++T T+
Sbjct: 63 SYRNIKALVAACNTITVLGEETIRNGH-DFEVIGMAKGSKMIPRVTKTGRIGIMATDFTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + V L +E G +D IK+ + I K
Sbjct: 122 STGAHKKEIQAAHPEYQVFGVGCPRLVPLIEHEQFGTAELKDAIKEYTD---ILKS-HDV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
D ++L+CTHYP + V LD ++ A++ R
Sbjct: 178 DTVMLSCTHYPFLKKEIEAAMGPAVTVLDPAEVTAKKCR 216
>gi|256829170|ref|YP_003157898.1| glutamate racemase [Desulfomicrobium baculatum DSM 4028]
gi|256578346|gb|ACU89482.1| glutamate racemase [Desulfomicrobium baculatum DSM 4028]
Length = 272
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 5/229 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E + I +FDSGIGGL VL+ + +P+ F+Y+ D PYG ++ R +
Sbjct: 3 ESECTLPIGVFDSGIGGLTVLKALTEALPKESFLYLGDTARLPYGTKSAKSV-TRYVLQT 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ +L L VIACNTA + + L+ +P + +G + P + A +++G I ++
Sbjct: 62 TALLKARGIKLLVIACNTATGVSLEALQEAYPELPVIGVIRPGAEAACRSSRNGRIGVIG 121
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T +T+ I + + + EE C +I ++ + G +
Sbjct: 122 TESTVNARGYEREILRIRPDAQVFAQACPLFVPLAEEGWCDGQIASLVAERYLGG-LVRD 180
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
G D +VL CTH+P++ + + V +D++ + A + +L R
Sbjct: 181 TG--IDTLVLGCTHFPVLADAIQDVVGPDVTLVDSARTTAEFVQDMLER 227
>gi|124515180|gb|EAY56691.1| Glutamate racemase [Leptospirillum rubarum]
Length = 314
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 9/210 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMF 66
E++ + I +FDSG+GGL VL+ P+ F Y+ D FPYG + + R
Sbjct: 5 ERRPEGGIALFDSGVGGLTVLRHFWETFPDRDFAYLGDMARFPYGTKSRETILRFARENV 64
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISI 125
LF L P L V AC T + + EL FP + +G + A +AA T++G + +
Sbjct: 65 LF---LRTLHPSLIVAACFTVSSQVLPELSREFPDVPIVGMLEAGARAACRLTRTGSVGV 121
Query: 126 LSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
L+T T+ + Y + + ++ + + A VEE I E +K +E F
Sbjct: 122 LATEGTISSQAYPAVIGEMTAHSVRVYGQACPLFAPMVEEGVTEGPIAELVARKYLE-PF 180
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ + D I+L CTHYP + + P
Sbjct: 181 LNVY-REVDTIILGCTHYPPLRRTLEAILP 209
>gi|289163917|ref|YP_003454055.1| glutamate racemase [Legionella longbeachae NSW150]
gi|288857090|emb|CBJ10905.1| putative glutamate racemase [Legionella longbeachae NSW150]
Length = 273
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 8/216 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I +FDSG+GGL VL+ +R +P+ F+Y+ D PYG +K+ M + ++
Sbjct: 7 QLAIGVFDSGMGGLTVLRALREGLPQESFVYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPAT 131
++ L VIACNTA T L+S P M L P A A T++ + +L+T T
Sbjct: 67 ERRIKAL-VIACNTATTAALPYLQSMLPDMPVLGVVAPGAAAAVAATKNNHVIVLATETT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ LI + + I+ + +L + EE ++ + +K ++ E
Sbjct: 126 IASNAYQQLIAQQLPRAVINTRACSVLVALAEEGMINNQVAREALKYYLDDFTHE----- 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D ++L CTH+P+ + + P V +D++ + A
Sbjct: 181 -DTVLLGCTHFPVFKSLLISILPEGVSIVDSAHATA 215
>gi|325266613|ref|ZP_08133290.1| glutamate racemase [Kingella denitrificans ATCC 33394]
gi|324982056|gb|EGC17691.1| glutamate racemase [Kingella denitrificans ATCC 33394]
Length = 287
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG-----NWEDHALKKRLMFLFSD 70
I +FDSG+GGL V++ + +P + +Y D PYG ED +L+ D
Sbjct: 27 IGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTIEDFSLQ------IVD 80
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTP 129
L + Q VIACNT + +++ +M L + A QAA A T++ I +++T
Sbjct: 81 FLLQNQVKALVIACNTIAAVAGAKVQQMAGNMPVLSVIEAGAQAALATTRNNHIGVIATN 140
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + IH++ I ++ +L VEE ++ +++ ++ +K
Sbjct: 141 TTVNSNAYARAIHAHNPDTRILSQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLADK-- 198
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
D ++L CTHYPL+ + RQ +P ++ +D+S
Sbjct: 199 --IDTLILGCTHYPLLKPLIRQEAPH-IELVDSS 229
>gi|303234940|ref|ZP_07321565.1| glutamate racemase [Finegoldia magna BVS033A4]
gi|302494058|gb|EFL53839.1| glutamate racemase [Finegoldia magna BVS033A4]
Length = 261
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 19/226 (8%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++K N I DSG+GGL V +K++ LMP +IY AD PYG+ +++++ +
Sbjct: 4 KQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGS----KTREQMIKIS 59
Query: 69 SDIL---DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLIS 124
+I+ ++ Q L V+ACNT ++ +RS + +G V +K A T + +
Sbjct: 60 ENIVRFFNEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQATYNKKVG 118
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMIL--ASRVEEYACGIKIKEDEIKKEIEG 182
+++T AT+ + L + Q I + S L VEE C K ++I K++E
Sbjct: 119 VIATKATV----DNGLYKKLLEQNDIEVCQSACLDFVGFVEE-DCKDK---EKILKKVEE 170
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D I+L CTHYP+++ ++ + + ++D +DS++
Sbjct: 171 YLKPIVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSE 216
>gi|302335208|ref|YP_003800415.1| glutamate racemase [Olsenella uli DSM 7084]
gi|301319048|gb|ADK67535.1| glutamate racemase [Olsenella uli DSM 7084]
Length = 257
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 7/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GG+ VL+ + +P F Y D PYG + + D+ +
Sbjct: 8 VGVFDSGVGGISVLRHLVDELPHEDFCYFGDSANNPYGGKTPDEILSLSRGIVDDMAARG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA ++ LR +P + +G PAI+ A + I +++T TL
Sbjct: 68 AKAV-VIACNTATSVAAARLRLEYPDLPIVGVEPAIRPATRAPRHERILVMATQVTLALD 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L S I + LA R+E+ + ++ IE + + D +
Sbjct: 127 KYHRLAEECGSSSQILGEPCVGLAHRIEQG----NLDAPDLHGLIE-TLVGRYRGTVDSV 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTHYP + R + V D ARR R LL
Sbjct: 182 VLGCTHYPFVRAQIRDVV-GDVPLFDGGTGAARRLRSLL 219
>gi|71908727|ref|YP_286314.1| glutamate racemase [Dechloromonas aromatica RCB]
gi|71848348|gb|AAZ47844.1| glutamate racemase [Dechloromonas aromatica RCB]
Length = 269
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 6/222 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+ +R +P+ F Y AD PYG+ + L++R L + L
Sbjct: 11 NQPIAVFDSGLGGLTVLRALRDRLPQEDFFYFADTRFLPYGDRPEVFLRER-GVLIAKAL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K Q +++ T E + + P +K A A T+SG+I +L+T TL
Sbjct: 70 AK-QGAKALVIACNTATAAAAEAIRAAIDLPVVALEPGVKPAVALTRSGVIGVLATTRTL 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L+ ++ + + + LA +E ++ ++
Sbjct: 129 ASERFQRLVGNHANHLRVIAQACPGLAEAIEAQGP----DSPQVAALLDAFVTPLAAADA 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
DV+VL CTHYP + + P LD + +AR+ LL
Sbjct: 185 DVVVLGCTHYPWVAGAIARRMPVGTSLLDTGEPVARQLERLL 226
>gi|94265271|ref|ZP_01289030.1| Glutamate racemase [delta proteobacterium MLMS-1]
gi|93454252|gb|EAT04568.1| Glutamate racemase [delta proteobacterium MLMS-1]
Length = 264
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 13/216 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS----DI 71
I IFDSG+GG+ V + + +P++ IY D PYG+ + +S D
Sbjct: 2 IGIFDSGVGGMTVARAIEQALPDHRLIYFGDLARTPYGSKSAETITA-----YSRQNVDF 56
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + L V+ACN+A ++ LR+++ F PA+++A + G + ++ T AT
Sbjct: 57 LLQQGAKLLVVACNSAASVATAALRASYELPLFEVISPAVREAVHCSSGGRVGVIGTRAT 116
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R L+ C + + +L VEE + + E K + + +
Sbjct: 117 IRSGVYEELLQRQRPACRVFAAACPLLVPLVEEG----WLDKRETKMILRRYLAPLKRHQ 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTHYPL+ + ++ V +D+S ++A
Sbjct: 173 VDTLVLGCTHYPLLKEMIQRRIGRRVRVIDSSAALA 208
>gi|300771876|ref|ZP_07081747.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33861]
gi|300761262|gb|EFK58087.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33861]
Length = 275
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 104/237 (43%), Gaps = 26/237 (10%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WED-HALKKRLMFLFS 69
+ I +FDSG GGL V ++++ +PEY +IY+ D+ PYGN +E + K +F
Sbjct: 8 NSPIGVFDSGYGGLSVFKEIKKELPEYDYIYLGDNARIPYGNRSFETVYQFTKECVFKLF 67
Query: 70 DILDKYQPVLSVIACNTAF--TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
D+ L ++ACNTA L + P LG + P + YT + I IL
Sbjct: 68 DLGCD----LVILACNTASAKALRSIQQHDLPPGKKVLGVIRPTTEIIKKYTITNKIGIL 123
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T++ I+ + + + VE +EI E F+E
Sbjct: 124 ATTGTVKSESYKIEINKFYPEIEVFQHDCPFWVPLVE---------NNEIDTEGARYFVE 174
Query: 187 K-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
K + D IVLACTHYPL++ V +Q P + + +A + L R
Sbjct: 175 KDIHELLSQSSEIDTIVLACTHYPLLLPVIKQFVPPHIQIISQGPIVAHSLKNYLER 231
>gi|325273239|ref|ZP_08139520.1| glutamate racemase [Pseudomonas sp. TJI-51]
gi|324101626|gb|EGB99191.1| glutamate racemase [Pseudomonas sp. TJI-51]
Length = 187
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL VL +++ L+P +YVAD PYG +++R + ++
Sbjct: 10 VMDSGVGGLSVLAEIQRLLPNETLLYVADCGHVPYGEKSPDYIRERCRRIAGFFREQGAK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL+
Sbjct: 70 AL-VLACNTATVAAAADLRELYPNWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSAKF 128
Query: 138 SNLIHSYVS 146
+ L+ + S
Sbjct: 129 AALLDRFAS 137
>gi|319651762|ref|ZP_08005888.1| glutamate racemase [Bacillus sp. 2_A_57_CT2]
gi|317396581|gb|EFV77293.1| glutamate racemase [Bacillus sp. 2_A_57_CT2]
Length = 264
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 13/227 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I I DSG+GGL V +++ +P +Y+ D PYG +K + +
Sbjct: 1 MKQPIGIIDSGVGGLTVAKEIMRQLPNEDIVYLGDTARCPYGPRPGDEVKSFTWQMTKYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L++ +L +IACNTA + +E+R ++ +G + P + A T++ I ++ T
Sbjct: 61 LERNIKML-IIACNTATAVALEEIRREL-TIPVIGVIFPGARTAIKVTKNHKIGVIGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEK- 187
T+R N + + +H ++ VE EY E + K+I ++
Sbjct: 119 TVRSKAYENALIQLNRRSDVHSLACPKFVPLVESGEY-------EGSVAKKIVAETLQPI 171
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+GK D ++L CTHYPL+ + + + V+ + + + AR A +L
Sbjct: 172 KGKGMDTLILGCTHYPLLEPIIKNVMGKGVNVISSGEETAREASTIL 218
>gi|322391355|ref|ZP_08064825.1| glutamate racemase [Streptococcus peroris ATCC 700780]
gi|321145781|gb|EFX41172.1| glutamate racemase [Streptococcus peroris ATCC 700780]
Length = 264
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++S + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKSKL-DIPVLGVILPGASAAIKASQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + +S A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPNLQVESLSCPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|288905998|ref|YP_003431220.1| glutamate racemase [Streptococcus gallolyticus UCN34]
gi|306832017|ref|ZP_07465172.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|288732724|emb|CBI14298.1| glutamate racemase [Streptococcus gallolyticus UCN34]
gi|304425943|gb|EFM29060.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
Length = 269
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 18/255 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + ++ V ACNTA + +E++ + LG + P A T++G
Sbjct: 53 YTWELVNFLLTQNVKMI-VFACNTATAVAWEEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I S Q ++ +S A VE ++ KK +
Sbjct: 111 KIGVIGTPMTIKSDIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSG 254
+R DD HA + +
Sbjct: 226 SRTQDDVTHAFYTTA 240
>gi|313893755|ref|ZP_07827321.1| glutamate racemase [Veillonella sp. oral taxon 158 str. F0412]
gi|313441319|gb|EFR59745.1| glutamate racemase [Veillonella sp. oral taxon 158 str. F0412]
Length = 267
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TFLACRIAEAL 64
Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+K QPV L VIACNT + DE+R S+ +G +K A + ++S I I++T AT
Sbjct: 65 EK-QPVKLMVIACNTFTVVALDEVRERV-SVPVIGVSQGVKTAISESKSNTIGIMATVAT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ ++ + + LA +E+ D ++ +E +
Sbjct: 123 VNSHIHKHVALEVDPEVLVWEQPCPELAGLIEQGHLDDFFVRDVCEEYVEPLL----SRE 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
DV+VL CTH+P + + +L+ + ++D
Sbjct: 179 IDVVVLGCTHFPFVKPLLEELTAGRIQFVD 208
>gi|325978965|ref|YP_004288681.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
gi|325178893|emb|CBZ48937.1| Glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
Length = 269
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 18/255 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + ++ V ACNTA + +E++ + LG + P A T++G
Sbjct: 53 YTWELVNFLLTQNVKMI-VFACNTATAVAWEEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I S Q ++ +S A VE ++ KK +
Sbjct: 111 KIGVIGTPMTIKSGIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSG 254
+R DD HA + +
Sbjct: 226 SRTQDDVTHAFYTTA 240
>gi|304407349|ref|ZP_07389002.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
gi|304343790|gb|EFM09631.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
Length = 264
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 14/229 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I FDSGIGGL VL + +P ++Y+AD + PYG +K + ++ +
Sbjct: 2 TIGFFDSGIGGLSVLAESLRRLPAQDYLYMADTLHVPYGTKTKEEVKDYVFEAVERMMSR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATL 132
L VIACNTA ++ ++LR+T+ S+ +G PA+K A ++ + +++T TL
Sbjct: 62 GIDAL-VIACNTATSIAVEDLRATY-SLPIVGMEPAVKPAVEMNRATGKRVLVMATQLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ L+ S V + I V S+ L V E ++ E+ + E+ +++ G
Sbjct: 120 QLPKYYALV-SRVDEGGI--VDSLPLPGLVRYCESLQFDPQVMEEYFRAELAPYNLDEYG 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ VL CTHYP ++ R + P + +D + +R LL R
Sbjct: 177 ----IFVLGCTHYPFYRNILRAMLPPHIQIVDGNAGTVKRLSALLNRFG 221
>gi|262341174|ref|YP_003284029.1| glutamate racemase [Blattabacterium sp. (Blattella germanica) str.
Bge]
gi|262272511|gb|ACY40419.1| glutamate racemase [Blattabacterium sp. (Blattella germanica) str.
Bge]
Length = 269
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 11/186 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSGIGGL++ ++++ MP IY D PYG + + M + S + K
Sbjct: 11 IFDSGIGGLLIAKEIKIQMPNEDLIYFGDTRNMPYGEKSKEFIIENSMKIASFLYKKKCK 70
Query: 78 VLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L VIACN+ + D L TF + + I + S I I++TPAT+R +
Sbjct: 71 AL-VIACNSITSNALDILCKTFHRKILIFNVIDPIVKHKILLSSKRIGIIATPATIRSNF 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ I Y I +S+ +LA +E+ G KIK++ I + K D ++
Sbjct: 130 YTKEIKKYYHHLDIVQISTSLLAPMIEK---GFKIKKNIINNYLNRL------KSIDTLL 180
Query: 197 LACTHY 202
LACTHY
Sbjct: 181 LACTHY 186
>gi|301062755|ref|ZP_07203367.1| glutamate racemase [delta proteobacterium NaphS2]
gi|300443162|gb|EFK07315.1| glutamate racemase [delta proteobacterium NaphS2]
Length = 272
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 108/245 (44%), Gaps = 19/245 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG GGL +L +PEY ++Y+ D PYGN + ++ + FLFS
Sbjct: 2 IGVFDSGFGGLTILGAFLKSLPEYDYLYLGDSARTPYGNKSQEVIYNYTRQAVRFLFSKG 61
Query: 72 LDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
VL ++ACNTA T + ++ L P+ LG V P + A A T+ G I +
Sbjct: 62 C-----VLIILACNTASTKALRKIQQEWLPENHPNRRVLGVVIPLAESAVASTRYGRIGV 116
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+ T AT+ I I + +L VEE G +KK +
Sbjct: 117 IGTQATIDSRVYEEEIRKLNPGVKIFTQACPLLVPLVEEGWVGKPESNMILKKYLS---- 172
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ K+ D ++L CTHY + ++ L+ + IA + + L R +TR+
Sbjct: 173 RLKRKQIDTLILGCTHYSFLEKDIARIMGKNCRVLNGPEIIAAKLKDYLNRHPEIETRIP 232
Query: 246 DDHAL 250
D+ L
Sbjct: 233 DNRNL 237
>gi|117928893|ref|YP_873444.1| glutamate racemase [Acidothermus cellulolyticus 11B]
gi|166231023|sp|A0LVJ8|MURI_ACIC1 RecName: Full=Glutamate racemase
gi|117649356|gb|ABK53458.1| glutamate racemase [Acidothermus cellulolyticus 11B]
Length = 263
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK-RLMFLFSDILDK 74
I +FDSG+GGL V + + L+P YVAD FPYG +++ L L + D
Sbjct: 6 IGVFDSGVGGLTVARAILDLLPHEPLYYVADTAHFPYGTKSIAEVRQYGLAVLDRMVADG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ L VIACN+A + + + R + PA+++A + T++G + ++ TPAT+
Sbjct: 66 VK--LLVIACNSASSALLRDARERYDVPVVEVIQPAVRKAVSATRNGKVGVIGTPATIAS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEGKRT 192
+ ++ + H+ L ++ VE GI + ++ E KE +E+
Sbjct: 124 MAYDD---AFAAAPHVDLTTAA-CPRFVEFVEAGITMSDELLECAKEYLAPIVERG---C 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYP + + V + ++D AR
Sbjct: 177 DTLILGCTHYPFLAGAIALVVGDEVMLVSSADETAR 212
>gi|38174839|emb|CAD70220.1| glutamate racemase [Microcystis aeruginosa PCC 7806]
gi|159027640|emb|CAO89504.1| murI [Microcystis aeruginosa PCC 7806]
Length = 270
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 26/265 (9%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL- 72
+ I +FDSG+GGL VL+++ +P+ +Y AD PYG K ++ +IL
Sbjct: 7 SPIGVFDSGVGGLTVLRELYKQLPQESILYFADTARLPYGTRS----KGEIIEFVREILT 62
Query: 73 --DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+++ + ++ACNT+ L +E+R+ F + LG + P K A Q I ++STP
Sbjct: 63 WMGEHRVKMVIMACNTSSALALEEVRAEFKDLPILGVILPGAK--TAVKQGKRIGVISTP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRV-EEYACGIKIKEDEIKKEIEGC 183
AT + I + + +I A+R+ + Y + ++ ++
Sbjct: 121 ATAKSNAYKQAIQEIDPTAQVWQIPCPEFVPLIEANRIFDPYTTQVA------REYLQPL 174
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E D +V CTHY + V R+L P V +D + ++ R A L +
Sbjct: 175 LAEN----IDTLVYGCTHYRHLSPVLRRLLPSSVRLVDPAAAVVRAAEKELELLGLKNPE 230
Query: 244 VFDDHALFLSGKPDIAMRRLMQGFG 268
+SG PD R Q G
Sbjct: 231 TSLPTNFAVSGDPDTFARLSRQWLG 255
>gi|310641730|ref|YP_003946488.1| glutamate racemase 2 [Paenibacillus polymyxa SC2]
gi|309246680|gb|ADO56247.1| Glutamate racemase 2 [Paenibacillus polymyxa SC2]
Length = 284
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 12/239 (5%)
Query: 5 NYPCEKKLQNSILI--FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
N E+K +S+ I FDSG+GG+ VL + +P +F+Y+AD + PYG +
Sbjct: 7 NTIVERKKVSSLKIGFFDSGLGGITVLSEALRRLPNENFVYMADTLHVPYGTKTPQEVLG 66
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG- 121
+ IL + L VIACNTA ++ ELR + +G PA+K A ++
Sbjct: 67 YVKASVQTILKEDIKAL-VIACNTATSIAVAELRKEY-KFPIIGMEPAVKPAVEMNRANG 124
Query: 122 -LISILSTPATLRRTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEIKKE 179
+ +L+TP TL+++ + L VS+ H V S+ L V +Y + E+
Sbjct: 125 KRVLVLATPLTLKQSGYAAL----VSRVDDHGSVDSLPLPELV-QYCEQLNFDRTELFNY 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+VL CTHYP + R+L P + +D S +R + +L N
Sbjct: 180 FNHKLSSFNLDIYGTVVLGCTHYPFYKEILRELLPSHIQLIDGSHGTVKRLKQVLSERN 238
>gi|197121115|ref|YP_002133066.1| glutamate racemase [Anaeromyxobacter sp. K]
gi|220915816|ref|YP_002491120.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196170964|gb|ACG71937.1| glutamate racemase [Anaeromyxobacter sp. K]
gi|219953670|gb|ACL64054.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 259
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 12/246 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P +Y+ D PYG + + + +L
Sbjct: 2 SRIGIFDSGVGGLTVQRAILAALPSADTVYLGDTARVPYGTKSAETVTQ-YSLRNARVLA 60
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ + L V+ACNTA + LR+ P + LG V P + AA +++G I ++ T T+
Sbjct: 61 RREIDLLVVACNTASAVALPALRAELP-VPVLGVVEPGARVAAKASRTGRIGVIGTQGTV 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191
I + + + EE G +DE+ + + +++
Sbjct: 120 ASGAYQAAILRERPGAEVVARACPLFVPLAEE---GWTDPDDEVVRGVVRRYLDPLRDAA 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRVFDD 247
D +VL CTHYPL+ + P V +D++D+IA R +P R H+ V D
Sbjct: 177 IDTLVLGCTHYPLLREAIARALPE-VRLVDSADAIAEEVRARIPAVAGRSGVHRFLVTDV 235
Query: 248 HALFLS 253
FL
Sbjct: 236 PERFLG 241
>gi|325299201|ref|YP_004259118.1| Glutamate racemase [Bacteroides salanitronis DSM 18170]
gi|324318754|gb|ADY36645.1| Glutamate racemase [Bacteroides salanitronis DSM 18170]
Length = 275
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 23/241 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL +L K+R L+P+Y+++Y+ D+ PYG + + + +
Sbjct: 7 IGIFDSGYGGLTILAKIRELLPQYNYLYLGDNARTPYGTRSFEVVYEFTLQAVRKLFGLG 66
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
P L ++ACNTA ++ + +L PS LG + P ++ A T + + +L+T
Sbjct: 67 CP-LVILACNTASAKALRSIQQHDLPHLDPSRRVLGVIRPTVECIGALTHTRHVGLLATE 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-- 187
T+R IH + + V + +E +E F++K
Sbjct: 126 GTVRSQSYPLEIHKLYADIRLTGVPCPMWVPLIE---------NNEFNSPGADYFVQKYL 176
Query: 188 -----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D I+L CTHYPL++ R+ +P + ++ +A + L R +T
Sbjct: 177 GQLLSQDPEIDTIILGCTHYPLLLEKIRRYTPSHIRLVEQGKYVASSLKDYLARHPELRT 236
Query: 243 R 243
R
Sbjct: 237 R 237
>gi|188996911|ref|YP_001931162.1| glutamate racemase [Sulfurihydrogenibium sp. YO3AOP1]
gi|229486280|sp|B2V9I5|MURI_SULSY RecName: Full=Glutamate racemase
gi|188931978|gb|ACD66608.1| glutamate racemase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 260
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 9/228 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL V +++ P+ Y+ D PYGN + + + S + Y
Sbjct: 3 IGIFDSGIGGLTVFKEIAASFPKVDLYYLGDTARVPYGNKSKTTIIRYSVECASYLYHNY 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + D LR P + +G V P + A +++ I ++ T AT++
Sbjct: 63 NVDAIVIACNTASSYALDTLREILP-IPVIGVVQPGAESAVKVSKNKKIGVIGTSATIKS 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ S I+ + + VEE ++ + +K+ ++ + K G D
Sbjct: 122 NSYFETLKSLDKDLEIYQKACPLFVPLVEEGWIDNEVAKLTVKEYLDD--LVKTG--IDT 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
++L CTHYPL+ + + L P ++ +D+S +I + + ++N +T
Sbjct: 178 LILGCTHYPLLKNTIKGLYPH-LNIVDSSVAIVEHLKNI--KLNIEET 222
>gi|206603690|gb|EDZ40170.1| Glutamate racemase [Leptospirillum sp. Group II '5-way CG']
Length = 314
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 10/224 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLM 65
E + + I +FDSG+GGL VL+ P+ F Y+ D FPYG + + R
Sbjct: 4 AEPRSKGGIALFDSGVGGLTVLRHFWETFPDRDFAYLGDMARFPYGTKSRETILRFAREN 63
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLIS 124
LF L P L V AC T + + EL FP + +G + A +AA T++G +
Sbjct: 64 VLF---LQTLHPSLIVAACFTVSSQVLPELSREFPDVPIVGVLEAGARAACRLTRTGSVG 120
Query: 125 ILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T+ + Y + + ++ + + A VEE I E +K +E
Sbjct: 121 VLATEGTISSQAYPAVIGEMTAHAVRVYGQACPLFAPMVEEGVTEGPIAELVARKYLE-P 179
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
F+ + D I+L CTHYP + + P V ++D +A
Sbjct: 180 FLSVY-REVDTIILGCTHYPPLRRTMEAILPD-VVFVDPGQELA 221
>gi|322387113|ref|ZP_08060724.1| glutamate racemase [Streptococcus infantis ATCC 700779]
gi|321142100|gb|EFX37594.1| glutamate racemase [Streptococcus infantis ATCC 700779]
Length = 264
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++S + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKSKL-DIPVLGVILPGASAAIKTSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 RIGVIGTPMTVQSDIYRQKIHDLDPNLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPEVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|309798855|ref|ZP_07693116.1| glutamate racemase [Streptococcus infantis SK1302]
gi|308117504|gb|EFO54919.1| glutamate racemase [Streptococcus infantis SK1302]
Length = 264
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKASQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVKSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|320354870|ref|YP_004196209.1| glutamate racemase [Desulfobulbus propionicus DSM 2032]
gi|320123372|gb|ADW18918.1| glutamate racemase [Desulfobulbus propionicus DSM 2032]
Length = 262
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 5/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ V + + P + +Y+ D PYG+ + A+ +D L +
Sbjct: 2 IGIFDSGVGGMTVARAIEQFCPGFPLVYLGDLARTPYGS-KSPAMITEYSHRNTDFLLRQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACN+A + LRS + + PA+ +AA + +G I ++ T AT+
Sbjct: 61 GAKLIVIACNSAASTASSFLRSHYHQLIIDVIFPAVDRAAGESVNGRIGVIGTRATINSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + C ++ + +L VEE ++ E K ++ K+ D +
Sbjct: 121 LYEQRLQAARPDCKVYSQACPLLVPLVEEGW----LERRETKMIVKKYLHPLRDKQIDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+L CTHYPL+ V +D+S +A + LL
Sbjct: 177 ILGCTHYPLLKKTIAPRIGRRVHIIDSSVEVALHLKTLL 215
>gi|167039186|ref|YP_001662171.1| glutamate racemase [Thermoanaerobacter sp. X514]
gi|300913219|ref|ZP_07130536.1| glutamate racemase [Thermoanaerobacter sp. X561]
gi|307723767|ref|YP_003903518.1| glutamate racemase [Thermoanaerobacter sp. X513]
gi|229486283|sp|B0K3R0|MURI_THEPX RecName: Full=Glutamate racemase
gi|166853426|gb|ABY91835.1| glutamate racemase [Thermoanaerobacter sp. X514]
gi|300889904|gb|EFK85049.1| glutamate racemase [Thermoanaerobacter sp. X561]
gi|307580828|gb|ADN54227.1| glutamate racemase [Thermoanaerobacter sp. X513]
Length = 264
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 32/254 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+
Sbjct: 6 IGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61
Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Q V + VIACNT +I +S + + F + AA YT + I +++T T+
Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTV 118
Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++Y N+ I Y C + L+ + S + Y K C
Sbjct: 119 ESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPI-AYETASK------------C 165
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E + K D +VL CTHYPL+ V ++ V +D + +A + L + + +
Sbjct: 166 LKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQ 225
Query: 244 VFDDHALFLSGKPD 257
+ F+SG D
Sbjct: 226 IRGKAEFFVSGDKD 239
>gi|302390710|ref|YP_003826531.1| glutamate racemase [Thermosediminibacter oceani DSM 16646]
gi|302201338|gb|ADL08908.1| glutamate racemase [Thermosediminibacter oceani DSM 16646]
Length = 273
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 11/225 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSGIGGL V +++ +P + +Y D PYG+ + R F + L
Sbjct: 5 ERPIGIFDSGIGGLTVAREIMNHLPGENLVYFGDTARVPYGSKSKETI-TRFAFEGVNFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K + VIACNT DEL+ P + +G + P + A T +G++ ++ T T
Sbjct: 64 MKQAVKMIVIACNTVSATCLDELQQAVP-VPVVGVIEPGARAAVNATVNGVVGVIGTERT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI--KKEIEGCFIEKEG 189
+ IH S I + + VEE G E + + G ++KEG
Sbjct: 123 INSGAYIKAIHRLNSSIKIFSRACPMFVPLVEE---GWLDNEAAVFAARTYLGP-LKKEG 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VLACTHYPL+ R++ V +D++ AR LL
Sbjct: 179 --IDTLVLACTHYPLLKPTLRKVMGDQVFLVDSAMETAREVARLL 221
>gi|20807679|ref|NP_622850.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4]
gi|24418564|sp|Q8RAJ0|MURI3_THETN RecName: Full=Glutamate racemase 3
gi|20516226|gb|AAM24454.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4]
Length = 271
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 16/227 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+++ ++P+ +++Y D PYG+ E A K++M + L
Sbjct: 11 IGVFDSGVGGLTVLKRLMEVLPQENYVYFGDTRRVPYGDRSKEEIKAFTKQIM----NFL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNT + + E + + F +K A T + I ++ T T
Sbjct: 67 KKKNVKIFVIACNTISAVFEKEGK----EIVFNVVEAGVKSAVETTCNKRIGVIGTRRTT 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
SN I ++ V+ L +E+ G K + +K+ + C + ++
Sbjct: 123 EERIYSNKIKEINKSIEVYEVACPELVPLIEK---GF-YKTESVKRVVIECVKNLKEEKI 178
Query: 193 DVIVLACTHYPLIV-HVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTHYP+++ ++ L V +D ++ +A + + R+N
Sbjct: 179 DTLVLGCTHYPIVIDYIEEALIGENVRIVDPAERLAYDVKEYITRVN 225
>gi|326790779|ref|YP_004308600.1| glutamate racemase [Clostridium lentocellum DSM 5427]
gi|326541543|gb|ADZ83402.1| glutamate racemase [Clostridium lentocellum DSM 5427]
Length = 253
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 14/242 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA----LKKRLMFLFSDILD 73
IFDSG+GG+ VL+ L+P+ +IY +D+ PYG + + FL S +D
Sbjct: 5 IFDSGVGGITVLKTALKLLPQVDYIYYSDNNHVPYGTKTKEEVLGYVNDVVAFLISQQVD 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
VIACNTA ++ LRS +P + +G PA+K A + G + + +T TL+
Sbjct: 65 AI-----VIACNTATSIAVKTLRSRYP-VPIIGMEPAVKLAFNHHSDGKVLVTATSLTLK 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NL++ + V ++ L V +A E +IK + + +
Sbjct: 119 EEKFKNLVNRLGEE---ERVCTLALPELV-TFAEAFMFDEAQIKAYFKEKLKDYPLEEIV 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+ + ++ P + D ++ R + L+ R + + S
Sbjct: 175 AIVLGCTHFVYFKKILKECLPPHITVYDGNEGTIRHLKELIDSEKVMHIRKEPEVTFYYS 234
Query: 254 GK 255
GK
Sbjct: 235 GK 236
>gi|308233557|ref|ZP_07664294.1| glutamate racemase [Atopobium vaginae DSM 15829]
gi|328943355|ref|ZP_08240820.1| glutamate racemase [Atopobium vaginae DSM 15829]
gi|327491324|gb|EGF23098.1| glutamate racemase [Atopobium vaginae DSM 15829]
Length = 261
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GG+ VL+K+ +P F Y D PYG + + +++
Sbjct: 5 QGFIGVFDSGLGGISVLKKLVSQLPHEDFFYFGDTGHNPYGARSADDIFDLSKAIVDNMV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA + +LR+ +P + +G PA+KQA I +L+TP TL
Sbjct: 65 CKGAKAV-VIACNTATAVAAHKLRTMYPQLPLIGIEPALKQACDAHIYKHILVLATPVTL 123
Query: 133 R----RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
R + + I ++ LA R+E+ + ++ ++
Sbjct: 124 RMEKFHQLRDRMCACNSANVKISALACDGLAHRIEQG----NLDAPDLDNDLRTILAPYI 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
G D +VL CTHYP + + PV D + +A R +L
Sbjct: 180 GS-VDAVVLGCTHYPFVKDRIVSILGNPV-CFDGAAGVAHHVRDVL 223
>gi|124025384|ref|YP_001014500.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. NATL1A]
gi|167017318|sp|A2C175|MURI_PROM1 RecName: Full=Glutamate racemase
gi|123960452|gb|ABM75235.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. NATL1A]
Length = 265
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 19/243 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG VL+K+ L P FIY+AD PYG ++ +KK + S +Y
Sbjct: 3 IGLFDSGIGGFTVLKKVIELCPNNSFIYLADTARLPYGVKTNNEIKKIAEEISSWF--RY 60
Query: 76 QPVLS-VIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q + + ++ACNT + D +++ P +G+ AA+ Q + +L+TP+T+
Sbjct: 61 QNIDAFLVACNTTNAIALDVIKNNLDIPVFDLIGS------AASNIQESRVGVLATPSTV 114
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R +N I + + + +E I D+I G ++
Sbjct: 115 RTKAYTNAILEFKPKTFVIEQPCPAFVPMIEMD----NINSDDITDVATGYLQPLLKQKI 170
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
++L C+HYPLI R++ P V +D +++++ + + + +TR + + F+
Sbjct: 171 HSLILGCSHYPLITSSLRKVLPSSVKLIDPAEALSFKLKFFI----DSKTRNYSKNKNFV 226
Query: 253 SGK 255
K
Sbjct: 227 DLK 229
>gi|227513134|ref|ZP_03943183.1| glutamate racemase [Lactobacillus buchneri ATCC 11577]
gi|227083709|gb|EEI19021.1| glutamate racemase [Lactobacillus buchneri ATCC 11577]
Length = 264
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 7/211 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+++ ++P +I+V D PYG ++K L +D + K
Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRK-LTKRIADYMLKQNVK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNT+ D L+ P + +G + P + A A T + I +++T T+
Sbjct: 60 MFVIACNTSTAASLDYLKKILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVSSGVY 118
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+I S + ++ + + VE G ++ +++ ++ F +K D +VL
Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQL-AYFHDKS---IDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
CTH+P++ + +D +D S A+
Sbjct: 175 GCTHFPVLEAEIKGAVNSGIDLIDPGISTAK 205
>gi|270292152|ref|ZP_06198367.1| glutamate racemase [Streptococcus sp. M143]
gi|270279680|gb|EFA25522.1| glutamate racemase [Streptococcus sp. M143]
Length = 264
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|257468922|ref|ZP_05633016.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|317063170|ref|ZP_07927655.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688846|gb|EFS25681.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 263
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GG VL+ M ++P + IY AD PYG L + L F D K
Sbjct: 6 SIGVFDSGVGGTTVLKIMAEILPHENMIYYADSGNAPYGKKTVEEL-QSLCFNIMDFFLK 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ VIACNTA ++ + + +G + P K AA +++G I++L+TP T
Sbjct: 65 NRCKAVVIACNTATAAALTAIKERY-DIPVIGVITPGSKAAANISKNGHIAVLATPFTAN 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + ++ L + +EE G + ED + EI I + D
Sbjct: 124 SNAYGEEIKKFAKKASVYQEGCSELCTMIEE---GWETFED--RGEILDGHISQFPGSAD 178
Query: 194 VIVLACTHYPLI 205
+VL CTHYP+I
Sbjct: 179 TLVLGCTHYPII 190
>gi|119026186|ref|YP_910031.1| glutamate racemase [Bifidobacterium adolescentis ATCC 15703]
gi|166231027|sp|A1A2L6|MURI_BIFAA RecName: Full=Glutamate racemase
gi|118765770|dbj|BAF39949.1| glutamate racemase [Bifidobacterium adolescentis ATCC 15703]
Length = 258
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 15/225 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++R MP H +Y D PYG +++ SD++ K
Sbjct: 7 IGVFDSGLGGISVAREIRRDMPNEHVLYFGDSANAPYGTKSPEQVRE-----LSDVIVKR 61
Query: 76 ---QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTP 129
Q V + VIACNTA + +ELR T+ + +G PA+K A + + + + +TP
Sbjct: 62 FVEQGVKAVVIACNTATSAAANELRDTY-DIPIIGMEPALKVACDRGHGKRQRVIVAATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TLR + L+ + + H + VE G D + + + F + +
Sbjct: 121 LTLRERKFAVLMDRFKAD---HTIFPEPCPGLVEIVEHGQLDDHDVVMRTLHQYFDQYDL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+ FR+L P +D ++ R +L
Sbjct: 178 STIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVL 222
>gi|294795084|ref|ZP_06760219.1| glutamate racemase [Veillonella sp. 3_1_44]
gi|294454446|gb|EFG22820.1| glutamate racemase [Veillonella sp. 3_1_44]
Length = 272
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 11 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TYLACRIAETL 69
Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+K QPV L VIACNT FT++ + S+ +G +K A ++S I I++T AT
Sbjct: 70 EK-QPVKLMVIACNT-FTVVALDAVRELVSVPVIGVSQGVKTAINKSKSKTIGIMATVAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--EDEIKKEIEGCFIEK-E 188
+ ++ IH +V+ H V ++ E A I+ +D +E+ ++E
Sbjct: 128 V-----NSHIHKHVALEVDHEV--LVWEQPCPELAGLIEQGHLDDYFVREVCKDYLEPLL 180
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
+ +V+VL CTH+P + + +L+ + ++D
Sbjct: 181 SREIEVVVLGCTHFPFVQPLLEELTSCRIQFID 213
>gi|293364220|ref|ZP_06610946.1| glutamate racemase [Streptococcus oralis ATCC 35037]
gi|307702427|ref|ZP_07639383.1| glutamate racemase [Streptococcus oralis ATCC 35037]
gi|291317066|gb|EFE57493.1| glutamate racemase [Streptococcus oralis ATCC 35037]
gi|307624009|gb|EFO02990.1| glutamate racemase [Streptococcus oralis ATCC 35037]
Length = 264
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAKL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|110597807|ref|ZP_01386090.1| Glutamate racemase [Chlorobium ferrooxidans DSM 13031]
gi|110340532|gb|EAT59015.1| Glutamate racemase [Chlorobium ferrooxidans DSM 13031]
Length = 272
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 26/233 (11%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD-- 70
++ I IFDSGIGGL V++ +R +P IY D PYG ++K + D
Sbjct: 9 ESPIGIFDSGIGGLTVVKAIRAALPSERLIYFGDTARVPYGPKSQITIRK---YAADDTA 65
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTP 129
IL +YQP L ++ACNT L D + + + +G + A + A T + I ++ T
Sbjct: 66 ILMRYQPKLIIVACNTVSALALDVVEKSCSGIPVIGVLKAGAELAVQVTGNNRIGVIGTQ 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE-------IKKEIEG 182
AT+ SN +Y + I+L++ S V AC + + E K I G
Sbjct: 126 ATV----CSN---AYARE--INLLNE---ESAVVSKACPLFVPLAEEGFIDHPATKLIAG 173
Query: 183 CFIEKEGKR-TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++ + K D +VL CTHYP++ V + + +D+++++A + + LL
Sbjct: 174 EYLAEIRKHDIDTLVLGCTHYPILKRVIADIVGPGIRIIDSAEAVALKTKELL 226
>gi|189485683|ref|YP_001956624.1| glutamate racemase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287642|dbj|BAG14163.1| glutamate racemase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 275
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 18/236 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
I+N+P I IFDSG GGL V+ + ++P IY D PYG+ + K
Sbjct: 10 INNHP--------IGIFDSGFGGLTVMSAITKMLPLESLIYFGDTAHVPYGSKSKDIVIK 61
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSG 121
+ S L + + L VIACNTA L+ T + +G + +AA Y +++
Sbjct: 62 YSKEITS-FLMRCKVKLIVIACNTASAFALSILQKTL-KVPVIGVIEPGSKAAVYASKNK 119
Query: 122 LISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I I+ T T+ ++Y + + +S+ ++ + + VEE +I + +KK I
Sbjct: 120 KIGIIGTEGTINSKSYLREI--NRISKSKVYQQACPLFVPLVEEGWSSGEITDSIVKKYI 177
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
E K+ D +VL CTHYPL+ + + V ++D++ ++++ + +L +
Sbjct: 178 EPLL----NKKIDTLVLGCTHYPLLRETLEKNAGGNVVFIDSAKAVSQEVKNILKK 229
>gi|261408424|ref|YP_003244665.1| glutamate racemase [Paenibacillus sp. Y412MC10]
gi|329928213|ref|ZP_08282144.1| glutamate racemase [Paenibacillus sp. HGF5]
gi|261284887|gb|ACX66858.1| glutamate racemase [Paenibacillus sp. Y412MC10]
gi|328937981|gb|EGG34381.1| glutamate racemase [Paenibacillus sp. HGF5]
Length = 268
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-- 69
+Q +I I DSG+GGL V +++ +P IY D PYG ++ LF+
Sbjct: 1 MQQAIAILDSGVGGLTVAKEVMRQLPREKIIYFGDTARAPYGPRTPEEVR-----LFTEQ 55
Query: 70 --DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
D L +Y P + VIACNTA D + S P + +G + P + A + T++G + ++
Sbjct: 56 IVDYLIQYDPKMIVIACNTATAAALDYISSKVP-VPVIGVIHPGARAAISATKTGHVGVI 114
Query: 127 STPATL-RRTYTSNL--IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
T T+ YT+ L + Y+ V S V G+ +D ++ +E
Sbjct: 115 GTVGTIGSGAYTAALKQLSPYIG------VESQACPELVPLVEHGLFRSKDSLQV-VERS 167
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQT 242
+ D ++L CTHYP +++ + + V + ++D AR +L + +
Sbjct: 168 LRGIKDTSIDCLILGCTHYPFLMNTIQTVMGPNVKLISSADETAREVSTILYDKGQLASS 227
Query: 243 RVFDDHALFLSGKPDI 258
H F +G P+I
Sbjct: 228 MEGPVHQFFCTGDPEI 243
>gi|306824554|ref|ZP_07457900.1| glutamate racemase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|315611776|ref|ZP_07886698.1| glutamate racemase [Streptococcus sanguinis ATCC 49296]
gi|322375928|ref|ZP_08050439.1| glutamate racemase [Streptococcus sp. C300]
gi|331265743|ref|YP_004325373.1| glutamate racemase [Streptococcus oralis Uo5]
gi|304433341|gb|EFM36311.1| glutamate racemase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|315316191|gb|EFU64221.1| glutamate racemase [Streptococcus sanguinis ATCC 49296]
gi|321279196|gb|EFX56238.1| glutamate racemase [Streptococcus sp. C300]
gi|326682415|emb|CBZ00032.1| glutamate racemase [Streptococcus oralis Uo5]
Length = 264
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|258511815|ref|YP_003185249.1| glutamate racemase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478541|gb|ACV58860.1| glutamate racemase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 281
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 8/226 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL V M+ +P +Y D PYG+ + + +R L
Sbjct: 5 HRPIGVFDSGIGGLTVFHAMKRRLPHESMVYFGDRARCPYGDRDPDEV-ERFALEIGRYL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ L V+ACNTA + L+ + +G + P QA +++G I ++ T T
Sbjct: 64 ERLGIKLLVVACNTATAVALPRLKQEL-GIDVVGVIEPGASQAIEASETGRIGVIGTSVT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + V+ + VE+ ++ D ++ + R
Sbjct: 123 VSSHAYAEALRVLRPDVSVVEVACPLFVPLVEQG----HVEGDAVEAVVRESLQPLLEAR 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPR 236
D +VL CTHYPL++ V R++ + + ++D+ A R AR L R
Sbjct: 179 IDTLVLGCTHYPLLMPVIRRVLGPSIRVISSADATAERVARVLAER 224
>gi|227524349|ref|ZP_03954398.1| glutamate racemase [Lactobacillus hilgardii ATCC 8290]
gi|227088580|gb|EEI23892.1| glutamate racemase [Lactobacillus hilgardii ATCC 8290]
Length = 264
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 7/211 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+++ ++P +I+V D PYG ++K L +D + K
Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRK-LTKRIADYMLKQNVK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNT+ D L+ P + +G + P + A A T + I +++T T+
Sbjct: 60 MFVIACNTSTAASLDYLKRILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVSSGVY 118
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+I S + ++ + + VE G ++ +++ ++ F +K D +VL
Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQL-AYFHDKS---IDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
CTH+P++ + +D +D S A+
Sbjct: 175 GCTHFPVLEAEIKGAVNSGIDLIDPGISTAK 205
>gi|300310872|ref|YP_003774964.1| glutamate racemase [Herbaspirillum seropedicae SmR1]
gi|300073657|gb|ADJ63056.1| glutamate racemase protein [Herbaspirillum seropedicae SmR1]
Length = 297
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 23/243 (9%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
+ P +I IFDSGIGGL VL+ + +P +Y AD PYG+ + + +R
Sbjct: 18 SSSPMPTAADAAIGIFDSGIGGLSVLRHIHAALPREQLLYFADSGYAPYGDKTEAQIVER 77
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + S +L++ L V+ACNTA +R+ +P + +G P +K AA T+S +
Sbjct: 78 SLAIASFLLEQRVKAL-VVACNTATAAAIQAIRTRWPQLLVVGIEPGLKPAAQLTRSRTV 136
Query: 124 SILSTPATL--------RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+L+T +TL + + Y+ Q + LV +I + A +++ E
Sbjct: 137 GVLATRSTLASQRFALLQAQMQAQYQVRYLPQACVGLVD-LIEKGELHSPAT-VQLLERY 194
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPL----IVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ +E + D +VL CTHYP I V + L D +D ++ R+ +
Sbjct: 195 LAPLLE--------QGADTLVLGCTHYPFVRPAIESVCKSLVGETPDIIDTGQAVTRQLQ 246
Query: 232 CLL 234
LL
Sbjct: 247 RLL 249
>gi|289577814|ref|YP_003476441.1| glutamate racemase [Thermoanaerobacter italicus Ab9]
gi|289527527|gb|ADD01879.1| glutamate racemase [Thermoanaerobacter italicus Ab9]
Length = 264
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 32/254 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+
Sbjct: 6 IGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61
Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Q V + VIACNT +I +S + + F + AA YT + I +++T T+
Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTV 118
Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++Y N+ I Y C + L+ + S + C
Sbjct: 119 ESKSYEKNIKIIDKNIKVYQKACPEFVPLIEKGLYNSPIAYETAS-------------NC 165
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E + + D +VL CTHYPL++ V ++ V +D + +A + L R + +
Sbjct: 166 LKELKERDIDTLVLGCTHYPLMMEVIEEIVGENVKIVDPAIKLAYDVKDYLLRRDLFNIQ 225
Query: 244 VFDDHALFLSGKPD 257
F+SG D
Sbjct: 226 NIGKTKFFVSGDKD 239
>gi|154488995|ref|ZP_02029844.1| hypothetical protein BIFADO_02305 [Bifidobacterium adolescentis
L2-32]
gi|154083132|gb|EDN82177.1| hypothetical protein BIFADO_02305 [Bifidobacterium adolescentis
L2-32]
Length = 258
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 15/225 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++R MP H +Y D PYG +++ SD++ K
Sbjct: 7 IGVFDSGLGGISVAREIRRDMPNEHVLYFGDSANAPYGTKSPEQVRE-----LSDVIVKR 61
Query: 76 ---QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTP 129
Q V + VIACNTA + +ELR T+ + +G PA+K A + + + + +TP
Sbjct: 62 FVEQGVKAVVIACNTATSAAANELRDTY-DIPIIGMEPALKVACDRGHGKRQHVIVAATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TLR + L+ + + H + VE G D + + + F + +
Sbjct: 121 LTLRERKFAVLMDRFKAD---HTIFPEPCPGLVEIVEHGQLDDHDVVMRTLHQYFDQYDL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+ FR+L P +D ++ R +L
Sbjct: 178 STIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVL 222
>gi|229163447|ref|ZP_04291398.1| Glutamate racemase [Bacillus cereus R309803]
gi|228620016|gb|EEK76891.1| Glutamate racemase [Bacillus cereus R309803]
Length = 269
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
KRTD+ ++L CTHYP++ V + + V + + D AR +L +N + +
Sbjct: 174 KRTDIDTLILGCTHYPILGPVIKNVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
DH +GK D+ + FG
Sbjct: 233 -SDHLFLTTGKIDLFKEIASKWFG 255
>gi|306830119|ref|ZP_07463303.1| glutamate racemase [Streptococcus mitis ATCC 6249]
gi|304427645|gb|EFM30741.1| glutamate racemase [Streptococcus mitis ATCC 6249]
Length = 264
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAKL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|255282581|ref|ZP_05347136.1| glutamate racemase [Bryantella formatexigens DSM 14469]
gi|255266874|gb|EET60079.1| glutamate racemase [Bryantella formatexigens DSM 14469]
Length = 275
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 19/257 (7%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLM 65
++ + + IFDSG+GGL V +++ +PE +Y D PYG+ + ++ +
Sbjct: 4 RERERPVGIFDSGVGGLTVTREVMRNIPEERIVYFGDTARVPYGSKSKETILRYSRQIVR 63
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124
FL + + V+ACNTA +E+R P + +G V P K A A T++ I
Sbjct: 64 FLLTQDVKAI-----VVACNTASAFALEEIRHELP-VPIIGVVRPGAKVACAATKNNRIG 117
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
++ T T+ + LI + + + VEE + E+ ++ + G
Sbjct: 118 VIGTKGTIASGLYTELIRQIKPDAEVIGKACPLFVPLVEEGMMKDTVTEEVARRYLAGL- 176
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + D ++L CTHYPL+ + ++ V ++ + A R LL + T
Sbjct: 177 ---QEQDIDTLILGCTHYPLLRSMIGKIMGEGVTLVNPAYETACSLRTLLIQEGLQNTEP 233
Query: 245 F----DDHALFLSGKPD 257
+ H ++S P+
Sbjct: 234 LAEGENPHRFYVSDAPE 250
>gi|282849105|ref|ZP_06258490.1| glutamate racemase [Veillonella parvula ATCC 17745]
gi|282580809|gb|EFB86207.1| glutamate racemase [Veillonella parvula ATCC 17745]
Length = 267
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TYLACRIAETL 64
Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+K QPV L VIACNT FT++ + S+ +G +K A ++S I I++T AT
Sbjct: 65 EK-QPVKLMVIACNT-FTVVALDAVRELVSVPVIGVSQGVKTAINKSKSKTIGIMATVAT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--EDEIKKEIEGCFIEK-E 188
+ ++ IH +V+ H V ++ E A I+ +D +EI ++E
Sbjct: 123 V-----NSHIHKHVALEVDHEV--LVWEQPCPELAGLIEQGHLDDYFVREICKEYLEPLL 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
+ +V+VL CTH+P + + +L+ + ++D
Sbjct: 176 SREIEVVVLGCTHFPFVQPLLEELTSGRIRFID 208
>gi|157164289|ref|YP_001466834.1| glutamate racemase [Campylobacter concisus 13826]
gi|166231029|sp|A7ZDH6|MURI_CAMC1 RecName: Full=Glutamate racemase
gi|112801263|gb|EAT98607.1| glutamate racemase [Campylobacter concisus 13826]
Length = 262
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDI--L 72
I IFDSG+GGL VL + + E+ F+Y AD PYG D LK F F + L
Sbjct: 3 IGIFDSGLGGLSVLNEALSKLSEHEFLYYADVKNVPYGQKSRDEILK----FSFDAVKFL 58
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS--ILSTPA 130
K V+ACNTA ++ ELR+ S+ +G PA+K+A + + +++TP
Sbjct: 59 VKNGAKAVVVACNTATSVAIKELRANL-SVPIIGMEPAVKKAHDLSHDDALKTLVIATPV 117
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ LI + ++ L++ R+ +A + + + +K ++ ++ +
Sbjct: 118 TVNGAKLKELIINLNAKDKTELLA----LPRLVNFAEKAEFESENVKSYLKEELVKFDLS 173
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ D +VL CTH+ R++ P V +D ++ +R
Sbjct: 174 KFDFLVLGCTHFNYFKDSLREILPPNVSIIDGNEGTIKR 212
>gi|77920315|ref|YP_358130.1| glutamate racemase [Pelobacter carbinolicus DSM 2380]
gi|77546398|gb|ABA89960.1| glutamate racemase [Pelobacter carbinolicus DSM 2380]
Length = 266
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 7/215 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSG+GGL VL++++ L+P +Y+ D PYG + A +R + L
Sbjct: 4 RAIGVFDSGVGGLTVLKEIQRLLPGEEVLYLGDTARVPYGT-KSPATVRRYALEAASFLT 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ + + V+ACNTA ++ +L + F + +G + P ++A + T++G I ++ T T+
Sbjct: 63 RRRVKMLVVACNTASSVALGDLENRF-KLPVIGVIEPGARRAVSVTRTGRIGVIGTEGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + I + + + VEE + + E
Sbjct: 122 KSGAYTLAIKQLAPDADVVALHCPLFVPLVEEG----WLDHPVTRLAAEEYLGSLRHHGI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTHYPL+ V +Q+ V +D+++ A
Sbjct: 178 DTLVLGCTHYPLLKPVLQQVLGPQVMLIDSAEETA 212
>gi|194335598|ref|YP_002017392.1| glutamate racemase [Pelodictyon phaeoclathratiforme BU-1]
gi|194308075|gb|ACF42775.1| glutamate racemase [Pelodictyon phaeoclathratiforme BU-1]
Length = 273
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 16/228 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD-- 70
+ I IFDSGIGGL V++ ++ +P +Y D PYG ++K + D
Sbjct: 10 EAPIGIFDSGIGGLTVVKAVQAALPFERILYFGDTARVPYGPKSQVTIRK---YAADDTA 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129
+L +YQP + ++ACNT L D ++ + + G + A + A T++ I ++ T
Sbjct: 67 MLMRYQPKIIIVACNTVSALALDVVQKSCGVIPVTGVLRAGARLATEVTRNNRIGVIGTR 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY---ACGIKIKEDEIKKEIEGCFIE 186
AT+ I+ + S+ + + + EE ++ +E E I
Sbjct: 127 ATVSSNAYGIAINEFNSEIEVVSRACPLFVPLAEEGFIDHLATRLIAEEYLAE-----IT 181
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+EG D +VL CTHYP++ V ++ + +D+++++A R R LL
Sbjct: 182 REG--IDTLVLGCTHYPILRKVIEEIVGPEIRIIDSAEAVALRTRELL 227
>gi|167038101|ref|YP_001665679.1| glutamate racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|307266301|ref|ZP_07547841.1| glutamate racemase [Thermoanaerobacter wiegelii Rt8.B1]
gi|320116507|ref|YP_004186666.1| glutamate racemase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|229486282|sp|B0KBP8|MURI_THEP3 RecName: Full=Glutamate racemase
gi|166856935|gb|ABY95343.1| glutamate racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|306918679|gb|EFN48913.1| glutamate racemase [Thermoanaerobacter wiegelii Rt8.B1]
gi|319929598|gb|ADV80283.1| glutamate racemase [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 264
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 32/254 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+
Sbjct: 6 IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61
Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Q V + VIACNT +I +S + + F + AA YT + I +++T T+
Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTV 118
Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++Y N+ I Y C + L+ + S + Y K C
Sbjct: 119 ESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPI-AYETASK------------C 165
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E + K D +VL CTHYPL+ V ++ V +D + +A + L + + +
Sbjct: 166 LKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQ 225
Query: 244 VFDDHALFLSGKPD 257
+ F+SG D
Sbjct: 226 IRGKAEFFVSGDKD 239
>gi|238020101|ref|ZP_04600527.1| hypothetical protein VEIDISOL_01982 [Veillonella dispar ATCC 17748]
gi|237863625|gb|EEP64915.1| hypothetical protein VEIDISOL_01982 [Veillonella dispar ATCC 17748]
Length = 267
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 18/225 (8%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TYLACHIAEAL 64
Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+K QPV L VIACNT + D +R S+ +G +K A + ++S I I++T AT
Sbjct: 65 EK-QPVKLMVIACNTFTVVALDAVRERV-SVPVIGVSQGVKTAISQSKSKTIGIMATVAT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--EDEIKKEIEGCFIEK-E 188
+ ++ IH +V+ H V ++ E A I+ +D +++ ++E
Sbjct: 123 V-----NSHIHKHVALEVDHEV--LVWEQPCPELAGLIEQGHLDDHFVRDVCTEYLEPLL 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD----NSDSIARR 229
+ +V+VL CTH+P + + +L+ + ++D S+ + RR
Sbjct: 176 SREIEVVVLGCTHFPFVQPLLEELTSGRIQFIDPAFETSELVRRR 220
>gi|189500924|ref|YP_001960394.1| glutamate racemase [Chlorobium phaeobacteroides BS1]
gi|189496365|gb|ACE04913.1| glutamate racemase [Chlorobium phaeobacteroides BS1]
Length = 269
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 9/232 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSGIGGL V++ ++ L+P IY D PYG+ ++K + IL KYQP
Sbjct: 11 IFDSGIGGLTVVKAIQALLPSERIIYFGDTARVPYGSKSQVTIRKYAQD-DTGILMKYQP 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPATLRRTY 136
L ++ACNT L D ++ + LG + A + A +++ + ++ T AT+
Sbjct: 70 KLIIVACNTVSALALDVVKRAGHGIPVLGVLEAGAELAVENSRNNQVGVIGTRATVLSNA 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+++ + + + + EE E I +E ++ D +V
Sbjct: 130 YPLAMNALNPEVEVFSAACPLFVPLAEEGFIDHPAAE-MIAREYLLPLLD---HGIDTLV 185
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVF 245
L CTHYP++ + +++ V +D+++++A +++ +L +N Q VF
Sbjct: 186 LGCTHYPILRKMIAEIAGQEVRIIDSAEAVALKSKEMLAGNGMLNGSQCHVF 237
>gi|148989674|ref|ZP_01821006.1| glutamate racemase [Streptococcus pneumoniae SP6-BS73]
gi|147924991|gb|EDK76073.1| glutamate racemase [Streptococcus pneumoniae SP6-BS73]
Length = 264
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGAKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|150018421|ref|YP_001310675.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
gi|149904886|gb|ABR35719.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
Length = 267
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 8/222 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSGIGG+ VL ++P +IY AD PYG +KK ++ I+++
Sbjct: 6 FDSGIGGITVLYDTLKVLPNEDYIYYADTSNVPYGPKPKDEVKKYILNAIDFIVEQGVKA 65
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLRRTY 136
+ VIACNTA ++ + LRS + S+ +G PA+K A + + + + +T TL+
Sbjct: 66 V-VIACNTATSVAIEALRSKY-SIPIIGMEPAVKPAIEKNKDMNKRVLVTATALTLKEEK 123
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
NLI+ ++ H+V + L V +++ ++ E + ++ + + + IV
Sbjct: 124 LHNLIYKLDNE---HVVDLLPLPGLV-QFSERLEFDEQIVLPYLKEELFKFDLNNYEAIV 179
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
L CTH+ + R+L P V +D + A+ + +L +N
Sbjct: 180 LGCTHFSYYKDMVRKLVPSNVSIIDGNIGTAKNLKRILKEMN 221
>gi|153808969|ref|ZP_01961637.1| hypothetical protein BACCAC_03270 [Bacteroides caccae ATCC 43185]
gi|149128302|gb|EDM19521.1| hypothetical protein BACCAC_03270 [Bacteroides caccae ATCC 43185]
Length = 280
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 14/251 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILNKIREILPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-L 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ + L P LG + P ++ TQS I IL+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNNLPKIDPERRVLGVIRPTVECIGNITQSRHIGILATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H ++ V+ + VE + + I+K I ++
Sbjct: 131 GTIKSESYPLEVHKLYPDIQVNGVACPMWVPLVENNEAQNEGADYFIRKYINQLL--QKD 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR---CLLPRINTHQTRVFD 246
+ D ++L CTHYPL++ +Q P + + + +A + C P ++ T+ +
Sbjct: 189 SQIDTVILGCTHYPLLLPKIQQYIPDNIRVIAQGEYVAESLKDYLCRHPEMDIKCTK--N 246
Query: 247 DHALFLSGKPD 257
+ LF + + +
Sbjct: 247 NSCLFYTTEAE 257
>gi|323483118|ref|ZP_08088510.1| hypothetical protein HMPREF9474_00259 [Clostridium symbiosum
WAL-14163]
gi|323691441|ref|ZP_08105713.1| glutamate racemase [Clostridium symbiosum WAL-14673]
gi|323403538|gb|EGA95844.1| hypothetical protein HMPREF9474_00259 [Clostridium symbiosum
WAL-14163]
gi|323504487|gb|EGB20277.1| glutamate racemase [Clostridium symbiosum WAL-14673]
Length = 275
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 7/220 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V++++ MP+ +Y D PYGN + + + + K
Sbjct: 7 IGVFDSGVGGLTVMREIMRQMPDERIVYFGDTARVPYGNKSKETVIRYSQQIIRFLQTKE 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134
+ VIACNTA + + + + +G + A +AA T++G I I+ T AT+R
Sbjct: 67 VKAI-VIACNTASACALEAVEKSL-DIPIIGVISAGSRAAVEATRNGKIGIIGTEATIRS 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
S + + + VEE + DEI C +GK D
Sbjct: 125 GVYSEEMKQLRGDIEVTGKPCPLFVPLVEEGLLHDSVT-DEIASRYLACL---KGKYIDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+V+ CTHYPL+ F++L V ++ + A + LL
Sbjct: 181 LVMGCTHYPLLRSTFKRLMGDDVTLVNPAYETAVELKGLL 220
>gi|237755668|ref|ZP_04584279.1| glutamate racemase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692180|gb|EEP61177.1| glutamate racemase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 260
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 9/228 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL V +++ P+ Y+ D PYGN + + + S + Y
Sbjct: 3 IGVFDSGIGGLTVFKEIAASFPKVDLYYLGDTARVPYGNKSKTTIIRYSVECASYLYHNY 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + D LR P + +G V P + A +++ I ++ T AT++
Sbjct: 63 NVDAIVIACNTASSYALDTLREILP-IPVIGVVQPGAESAVKVSKNKKIGVIGTSATIKS 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ S ++ + + VEE ++ + +K+ ++ K G D
Sbjct: 122 NSYLETLKSLDKDLEVYQKACPLFVPLVEEGWIDNEVAKLTVKEYLDDLV--KTG--IDT 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
++L CTHYPL+ + + L P ++ +D+S +I + + ++N +T
Sbjct: 178 LILGCTHYPLLKNTIKGLYPH-LNIVDSSVAIVEHLKNI--KLNIEET 222
>gi|95931009|ref|ZP_01313737.1| Glutamate racemase [Desulfuromonas acetoxidans DSM 684]
gi|95132905|gb|EAT14576.1| Glutamate racemase [Desulfuromonas acetoxidans DSM 684]
Length = 289
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 15/227 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
+N+I +FDSG+GGL VL ++R L+P + IY+ D PYG+ + ++ FL
Sbjct: 16 ENAIGVFDSGVGGLTVLHELRRLLPGENLIYLGDTARVPYGSKSPETVCSYSEQAAEFLL 75
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Q + V+ACNTA + + L+ P +P + A ++ ++ ++ T
Sbjct: 76 AK-----QVKMIVVACNTASSFALERLQQCLPVPVVGVILPGARCAVRLSRRHVVGVIGT 130
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMI-LASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T+ + + Q + +VS L + E ++ +E +E+
Sbjct: 131 HGTVSSDAYPRALKAL--QPDMKVVSEPCPLFVPLAEEGWAEHAVAHQVAREYLAPLLEQ 188
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ D +VL CTHYPL+ RQ+ P V +D++ A + LL
Sbjct: 189 Q---IDTLVLGCTHYPLLKPTLRQVLPDTVQLVDSAQETALEVKELL 232
>gi|221195778|ref|ZP_03568831.1| glutamate racemase [Atopobium rimae ATCC 49626]
gi|221184252|gb|EEE16646.1| glutamate racemase [Atopobium rimae ATCC 49626]
Length = 284
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 7/217 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSGIGG+ VL+++ +P FI+ D PYG+ ++ + +D+
Sbjct: 28 VFDSGIGGISVLKRLVTELPYERFIFYGDSAHAPYGSKTPQQVQALSGAITDTFVDEGAK 87
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA LR +P + +G PA+K AA G I +++T TL +
Sbjct: 88 AI-VIACNTATAAAAQMLRERYPQLPIVGVEPALKPAALAHSQGRIIVMATARTLSLSKF 146
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L + + I ++ + +E D ++K I + D +VL
Sbjct: 147 LRLEAQWGATSQIIPIAGTGIVELIEAGKANSPQMHDLLEK-----LIGQYRGTVDAVVL 201
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
CTHYP I R + VD+ D A++ LL
Sbjct: 202 GCTHYPFITSQIRAVL-GNVDFYDGGTGAAQQLHRLL 237
>gi|160881908|ref|YP_001560876.1| glutamate racemase [Clostridium phytofermentans ISDg]
gi|160430574|gb|ABX44137.1| glutamate racemase [Clostridium phytofermentans ISDg]
Length = 270
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 12/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+++I +FDSGIGGL V +++ +P+ IY D PYG+ + + +L
Sbjct: 4 KSAIGVFDSGIGGLTVTKEIMNQLPKEQIIYFGDTARLPYGSKSKATITMYSRQIIRFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K + VIACNTA + +R + +G + P K AA T++G I +++T T
Sbjct: 64 TKDVKAI-VIACNTASAHALETVRKEI-EIPIIGVINPGAKVAAETTRNGNIGVIATEGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190
+R + + + + + VEE +D I KE+ +I++ K
Sbjct: 122 IRSGIYNEFLGEIRPDLRVFGKACPLFVPLVEEGWI-----DDPITKEVVSRYIQELLYK 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDH 248
D ++L CTHYPL+ V R++ ++ ++ + AR + +L ++ + +T +H
Sbjct: 177 DIDTLILGCTHYPLLRKVIREVVGDGIELVNPAYETARTLKHVLEEQKLLSEETTT-PEH 235
Query: 249 ALFLS 253
F+S
Sbjct: 236 TFFVS 240
>gi|315223134|ref|ZP_07865002.1| glutamate racemase [Streptococcus anginosus F0211]
gi|315187823|gb|EFU21570.1| glutamate racemase [Streptococcus anginosus F0211]
Length = 264
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K ++ V+ACNTA ++ +E++ + LG + P A +Q G
Sbjct: 53 YTWQLVQFLLTKNVKMI-VLACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKASQHG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I I+ TP T++ I + + + +S VE I KK +
Sbjct: 111 TIGIIGTPMTIQSDIYRQKIERLLPEVEVTSLSCPKFVPLVESNELSSSIT----KKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ +GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 167 ESLMPLKGK-VDTLVLGCTHYPLLKPIIQNVMGPAVKLIDSGAECVRDISVLLNYFEINH 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|218961215|ref|YP_001740990.1| Glutamate racemase [Candidatus Cloacamonas acidaminovorans]
gi|167729872|emb|CAO80784.1| Glutamate racemase [Candidatus Cloacamonas acidaminovorans]
Length = 267
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 34/272 (12%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE-----DHALKKRLMF 66
++ +I IFDSG+GGL V Q +R P IY D PYG D++L+
Sbjct: 1 MKRAIGIFDSGVGGLTVYQAIRNTFPNEDIIYFGDTARVPYGPKSPNTIIDYSLQNARFL 60
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
L I + ++ACNT+ + L++ + +G + P +Q+ T+ I +
Sbjct: 61 LQQGIK------ILIVACNTSSAVAIPALQN-LSDIPVIGVIEPGAEQSVKVTKCKRIGV 113
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE----EYACGIKIKEDEIKKEIE 181
+ T T+R + I + + + + + VE E+ I E+ +K
Sbjct: 114 IGTEGTIRSGAYPSAIRKLLPEAFVVSSACPLFVPLVEEGWQEHPVAEVIAEEYLK---- 169
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
E + + D +VL CTHYPL+ ++ +Q+ V +D++ ++A C L N Q
Sbjct: 170 ----EMKEQNIDTLVLGCTHYPLLSNIIQQVMGEEVTLVDSAMAVAEYLSCYLSAENDGQ 225
Query: 242 TR-----VFDDHALFLSGKPDIAMRRLMQGFG 268
V D+ F +IA R L G
Sbjct: 226 KGRDSFYVSDNENKF----AEIAERILQHNIG 253
>gi|291280169|ref|YP_003497004.1| glutamate racemase [Deferribacter desulfuricans SSM1]
gi|290754871|dbj|BAI81248.1| glutamate racemase [Deferribacter desulfuricans SSM1]
Length = 253
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 8/231 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSGIGGL V + + P+ Y D PYG + K ++
Sbjct: 2 AIGVFDSGIGGLTVFRTIAKEFPKLDIYYFGDTARVPYGIRSKDTIIKYTTECIDYLVKH 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
Y VIACN+A + D L+ F ++ LG + P ++ A T++ I ++ T AT+
Sbjct: 62 YNLEAIVIACNSASSYAIDSLKIKF-NLPVLGVIDPGVRAALTTTKTNNILVIGTKATVN 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
N I+ I+ + + VEE K+ E + KE +I+K D
Sbjct: 121 SNAYPNKINQISPLTKIYQQACPLFVPIVEEGLFNHKVAETMV-KEYLSPYIDK----ID 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
++L CTHYPL+ +L P ++ +D+S +I R L N R+
Sbjct: 176 TVILGCTHYPLLKETISKLYP-DLNLVDSSIAILDDLRNLQITFNESGKRL 225
>gi|269797494|ref|YP_003311394.1| glutamate racemase [Veillonella parvula DSM 2008]
gi|269094123|gb|ACZ24114.1| glutamate racemase [Veillonella parvula DSM 2008]
Length = 267
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 117/238 (49%), Gaps = 16/238 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TYLACRIAETL 64
Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+K QPV L VIACNT FT++ + S+ +G +K A ++S I I++T AT
Sbjct: 65 EK-QPVKLMVIACNT-FTVVALDAVRELVSVPVIGVSQGVKTAINKSKSKTIGIMATVAT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--EDEIKKEIEGCFIEK-E 188
+ ++ IH +V+ H V + E A I+ +D +E+ ++E
Sbjct: 123 V-----NSHIHKHVALEVDHEV--FVWEQPCPELAGLIEQGHLDDYFVREVCKDYLEPLL 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRV 244
+ +V+VL CTH+P + + +L+ + ++D + + R L N HQ V
Sbjct: 176 SREIEVVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNHQDTV 233
>gi|313205149|ref|YP_004043806.1| glutamate racemase [Paludibacter propionicigenes WB4]
gi|312444465|gb|ADQ80821.1| glutamate racemase [Paludibacter propionicigenes WB4]
Length = 282
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 29/244 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL +L+K+R +PEY +IY+ D+ PYG + K + + + +
Sbjct: 14 IGIFDSGYGGLTILEKIRTELPEYDYIYLGDNARTPYGTRSFDVVYKFTLECVTKLFE-M 72
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L V+ACNTA ++ + +L + LG + P ++ A T+S I +L+T
Sbjct: 73 GCQLVVLACNTASAKALRSIQQRDLPLLDANRRVLGVIRPTVEAVGAMTRSKHIGLLATS 132
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186
T++ +SY + H L +++ S AC + I+ +E K E F+
Sbjct: 133 GTVQS-------NSYPLEIH-KLHDDIVVTSE----ACPMWVPLIENNEHKSEGADYFVR 180
Query: 187 KEGK-------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
K + + D I+L CTHYPL+ + L P + + + +A+ L R
Sbjct: 181 KNVEHLLAADPKIDTIMLGCTHYPLLEDKIKSLLPKEISVVSQGEIVAKSLADYLQRHTE 240
Query: 240 HQTR 243
++R
Sbjct: 241 MESR 244
>gi|15901709|ref|NP_346313.1| glutamate racemase [Streptococcus pneumoniae TIGR4]
gi|15903738|ref|NP_359288.1| glutamate racemase [Streptococcus pneumoniae R6]
gi|111657289|ref|ZP_01408054.1| hypothetical protein SpneT_02001506 [Streptococcus pneumoniae
TIGR4]
gi|116516596|ref|YP_817111.1| glutamate racemase [Streptococcus pneumoniae D39]
gi|148993339|ref|ZP_01822879.1| glutamate racemase [Streptococcus pneumoniae SP9-BS68]
gi|148998745|ref|ZP_01826183.1| glutamate racemase [Streptococcus pneumoniae SP11-BS70]
gi|149006464|ref|ZP_01830163.1| glutamate racemase [Streptococcus pneumoniae SP18-BS74]
gi|149011254|ref|ZP_01832501.1| glutamate racemase [Streptococcus pneumoniae SP19-BS75]
gi|149025005|ref|ZP_01836385.1| glutamate racemase [Streptococcus pneumoniae SP23-BS72]
gi|168483413|ref|ZP_02708365.1| glutamate racemase [Streptococcus pneumoniae CDC1873-00]
gi|168487311|ref|ZP_02711819.1| glutamate racemase [Streptococcus pneumoniae CDC1087-00]
gi|168489841|ref|ZP_02714040.1| glutamate racemase [Streptococcus pneumoniae SP195]
gi|168491804|ref|ZP_02715947.1| glutamate racemase [Streptococcus pneumoniae CDC0288-04]
gi|168494203|ref|ZP_02718346.1| glutamate racemase [Streptococcus pneumoniae CDC3059-06]
gi|168574930|ref|ZP_02720893.1| glutamate racemase [Streptococcus pneumoniae MLV-016]
gi|169833125|ref|YP_001695247.1| glutamate racemase [Streptococcus pneumoniae Hungary19A-6]
gi|182684824|ref|YP_001836571.1| glutamate racemase [Streptococcus pneumoniae CGSP14]
gi|221232616|ref|YP_002511770.1| glutamate racemase [Streptococcus pneumoniae ATCC 700669]
gi|225855314|ref|YP_002736826.1| glutamate racemase [Streptococcus pneumoniae JJA]
gi|225857468|ref|YP_002738979.1| glutamate racemase [Streptococcus pneumoniae P1031]
gi|225859643|ref|YP_002741153.1| glutamate racemase [Streptococcus pneumoniae 70585]
gi|225861674|ref|YP_002743183.1| glutamate racemase [Streptococcus pneumoniae Taiwan19F-14]
gi|298230339|ref|ZP_06964020.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298503608|ref|YP_003725548.1| glutamate racemase [Streptococcus pneumoniae TCH8431/19A]
gi|303254610|ref|ZP_07340712.1| glutamate racemase [Streptococcus pneumoniae BS455]
gi|303258827|ref|ZP_07344807.1| glutamate racemase [Streptococcus pneumoniae SP-BS293]
gi|303261990|ref|ZP_07347936.1| glutamate racemase [Streptococcus pneumoniae SP14-BS292]
gi|303263853|ref|ZP_07349775.1| glutamate racemase [Streptococcus pneumoniae BS397]
gi|303265612|ref|ZP_07351511.1| glutamate racemase [Streptococcus pneumoniae BS457]
gi|303269880|ref|ZP_07355623.1| glutamate racemase [Streptococcus pneumoniae BS458]
gi|307068494|ref|YP_003877460.1| glutamate racemase [Streptococcus pneumoniae AP200]
gi|307128076|ref|YP_003880107.1| glutamate racemase [Streptococcus pneumoniae 670-6B]
gi|307710764|ref|ZP_07647192.1| glutamate racemase [Streptococcus mitis SK321]
gi|54037869|sp|P63641|MURI_STRR6 RecName: Full=Glutamate racemase
gi|54041262|sp|P63640|MURI_STRPN RecName: Full=Glutamate racemase
gi|122278043|sp|Q04IS7|MURI_STRP2 RecName: Full=Glutamate racemase
gi|229486278|sp|B1I891|MURI_STRPI RecName: Full=Glutamate racemase
gi|229486279|sp|B2ISX9|MURI_STRPS RecName: Full=Glutamate racemase
gi|254766126|sp|C1C9E7|MURI_STRP7 RecName: Full=Glutamate racemase
gi|254766127|sp|B8ZNI5|MURI_STRPJ RecName: Full=Glutamate racemase
gi|254766129|sp|C1CGA5|MURI_STRZJ RecName: Full=Glutamate racemase
gi|254766130|sp|C1CMJ1|MURI_STRZP RecName: Full=Glutamate racemase
gi|254766131|sp|C1CTB1|MURI_STRZT RecName: Full=Glutamate racemase
gi|14973385|gb|AAK75953.1| glutamate racemase [Streptococcus pneumoniae TIGR4]
gi|15459371|gb|AAL00499.1| Glutamate racemase [Streptococcus pneumoniae R6]
gi|116077172|gb|ABJ54892.1| glutamate racemase [Streptococcus pneumoniae D39]
gi|147755439|gb|EDK62488.1| glutamate racemase [Streptococcus pneumoniae SP11-BS70]
gi|147761762|gb|EDK68725.1| glutamate racemase [Streptococcus pneumoniae SP18-BS74]
gi|147764244|gb|EDK71175.1| glutamate racemase [Streptococcus pneumoniae SP19-BS75]
gi|147928106|gb|EDK79125.1| glutamate racemase [Streptococcus pneumoniae SP9-BS68]
gi|147929498|gb|EDK80493.1| glutamate racemase [Streptococcus pneumoniae SP23-BS72]
gi|168995627|gb|ACA36239.1| glutamate racemase [Streptococcus pneumoniae Hungary19A-6]
gi|172043246|gb|EDT51292.1| glutamate racemase [Streptococcus pneumoniae CDC1873-00]
gi|182630158|gb|ACB91106.1| glutamate racemase [Streptococcus pneumoniae CGSP14]
gi|183569790|gb|EDT90318.1| glutamate racemase [Streptococcus pneumoniae CDC1087-00]
gi|183571721|gb|EDT92249.1| glutamate racemase [Streptococcus pneumoniae SP195]
gi|183573878|gb|EDT94406.1| glutamate racemase [Streptococcus pneumoniae CDC0288-04]
gi|183575767|gb|EDT96295.1| glutamate racemase [Streptococcus pneumoniae CDC3059-06]
gi|183578940|gb|EDT99468.1| glutamate racemase [Streptococcus pneumoniae MLV-016]
gi|220675078|emb|CAR69656.1| glutamate racemase [Streptococcus pneumoniae ATCC 700669]
gi|225720017|gb|ACO15871.1| glutamate racemase [Streptococcus pneumoniae 70585]
gi|225723477|gb|ACO19330.1| glutamate racemase [Streptococcus pneumoniae JJA]
gi|225725094|gb|ACO20946.1| glutamate racemase [Streptococcus pneumoniae P1031]
gi|225728008|gb|ACO23859.1| glutamate racemase [Streptococcus pneumoniae Taiwan19F-14]
gi|298239203|gb|ADI70334.1| glutamate racemase [Streptococcus pneumoniae TCH8431/19A]
gi|301802572|emb|CBW35333.1| glutamate racemase [Streptococcus pneumoniae INV200]
gi|302598322|gb|EFL65366.1| glutamate racemase [Streptococcus pneumoniae BS455]
gi|302637073|gb|EFL67562.1| glutamate racemase [Streptococcus pneumoniae SP14-BS292]
gi|302640328|gb|EFL70783.1| glutamate racemase [Streptococcus pneumoniae SP-BS293]
gi|302640583|gb|EFL70987.1| glutamate racemase [Streptococcus pneumoniae BS458]
gi|302644739|gb|EFL74987.1| glutamate racemase [Streptococcus pneumoniae BS457]
gi|302646891|gb|EFL77116.1| glutamate racemase [Streptococcus pneumoniae BS397]
gi|306410031|gb|ADM85458.1| Glutamate racemase [Streptococcus pneumoniae AP200]
gi|306485138|gb|ADM92007.1| glutamate racemase [Streptococcus pneumoniae 670-6B]
gi|307617370|gb|EFN96542.1| glutamate racemase [Streptococcus mitis SK321]
gi|327390042|gb|EGE88387.1| glutamate racemase [Streptococcus pneumoniae GA04375]
gi|332072219|gb|EGI82704.1| glutamate racemase [Streptococcus pneumoniae GA17545]
gi|332072704|gb|EGI83187.1| glutamate racemase [Streptococcus pneumoniae GA17570]
gi|332073032|gb|EGI83512.1| glutamate racemase [Streptococcus pneumoniae GA41301]
gi|332199901|gb|EGJ13976.1| glutamate racemase [Streptococcus pneumoniae GA41317]
gi|332200436|gb|EGJ14509.1| glutamate racemase [Streptococcus pneumoniae GA47368]
Length = 264
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|15605845|ref|NP_213222.1| glutamate racemase [Aquifex aeolicus VF5]
gi|6225737|sp|O66662|MURI_AQUAE RecName: Full=Glutamate racemase
gi|2983010|gb|AAC06621.1| glutamate racemase [Aquifex aeolicus VF5]
Length = 254
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 9/213 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GG+ VL+ +R P +Y+ D PYG + + + + DK
Sbjct: 3 IGIFDSGAGGMTVLKAIREAYPNVDVVYLGDTARVPYGIRSKETIVRYSKECANFLKDKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+L V+ACNTA +EL+ FP F P +K+A +++ I ++ T AT++
Sbjct: 63 VDLL-VVACNTASAYALEELKREFPFPVFGVIEPGVKEALRKSKTKRIGVIGTQATIKSG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + ++ + + VEE + E EI K++ +++ + D +
Sbjct: 122 AYQEALKR--AGAEVYSKACPLFVPLVEE-----GMIEGEIPKKVVEHYLKDFKGKVDTL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+L CTHYPL+ + V+ +D+S + A+
Sbjct: 175 ILGCTHYPLLKREIQNFLEG-VNVIDSSRATAK 206
>gi|194397943|ref|YP_002038470.1| glutamate racemase [Streptococcus pneumoniae G54]
gi|226707591|sp|B5E1Z3|MURI_STRP4 RecName: Full=Glutamate racemase
gi|194357610|gb|ACF56058.1| glutamate racemase [Streptococcus pneumoniae G54]
Length = 264
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRKKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|331002651|ref|ZP_08326166.1| glutamate racemase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330407064|gb|EGG86568.1| glutamate racemase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 267
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 16/240 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++ MP+ +Y D PYG+ + K + + K
Sbjct: 5 IGIFDSGVGGLTVAKEIVAQMPDESTVYFGDTARVPYGSKSGDTIIKYSRQIVKFLQTKN 64
Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131
+ VIACNTA D L++ P M + GAV AIK T+ G I ++ T T
Sbjct: 65 VKAI-VIACNTASAFALDILKTEIDIPIMGVIHAGAVTAIKT----TKVGRIGVVGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I ++ + + +L VE+ ++ ++ I + + E + +
Sbjct: 120 ISSGIYKKTIQDINNELEVIQKACPLLVPLVEDGLINDRVTDEIISRYVS----ELKSRH 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ F ++ V ++ + A+ + LL + N T+ D +F
Sbjct: 176 IDSLVLGCTHYPLLYKTFGRIMGEGVSLVNPAYETAKELKSLLEQKNLCATK---DGGIF 232
>gi|307709763|ref|ZP_07646214.1| glutamate racemase [Streptococcus mitis SK564]
gi|301794843|emb|CBW37299.1| glutamate racemase [Streptococcus pneumoniae INV104]
gi|307619465|gb|EFN98590.1| glutamate racemase [Streptococcus mitis SK564]
gi|332201291|gb|EGJ15362.1| glutamate racemase [Streptococcus pneumoniae GA47901]
Length = 264
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|124005254|ref|ZP_01690095.1| glutamate racemase [Microscilla marina ATCC 23134]
gi|123989076|gb|EAY28654.1| glutamate racemase [Microscilla marina ATCC 23134]
Length = 268
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 24/240 (10%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N+I IFDSGIGGL V + +R L+P+ IY D PYG+ AL+ + + + +L
Sbjct: 5 NAIGIFDSGIGGLTVARAVRQLLPQESIIYFGDTAHLPYGDKSTAALQAYAIKICNVLLQ 64
Query: 74 KYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILST 128
+ V+ ++ACN+ A+ L+K+ + S M + + I A GLI
Sbjct: 65 QNCKVI-LMACNSASVAAYDLVKEYVGSRAKVMNVIEPMINYINDVYAGKNVGLIGT--- 120
Query: 129 PATLRRTYTSNLIHSYVSQ----CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
++T SN+ V Q + +++ +L +EE ++ I+ EI +
Sbjct: 121 ----KQTILSNVYKKKVDQLGAGIDLRSLATPLLVPMIEE-----NFFKNSIRAEIIETY 171
Query: 185 IEKEG-KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQT 242
+ +E + D ++L CTHYPLI ++ V+ LD+S+ +A + +L N T++T
Sbjct: 172 LSREELQDIDALILGCTHYPLIKASIQKFYNTKVEVLDSSEIVASSLKGMLEMHNLTNKT 231
>gi|46447487|ref|YP_008852.1| glutamate racemase [Candidatus Protochlamydia amoebophila UWE25]
gi|46401128|emb|CAF24577.1| probable glutamate racemase [Candidatus Protochlamydia amoebophila
UWE25]
Length = 249
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 115/236 (48%), Gaps = 19/236 (8%)
Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88
+++M L+P+ + +Y+ D PYGN + + + +L+K VL V+ACNTA
Sbjct: 1 MREMIRLLPQENLLYLGDTARVPYGNKSAATIIRYSIENAIFLLEKQIKVL-VVACNTAS 59
Query: 89 TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
L +L+ F + +G + P K AAA T++ I++L T T+ + IH +
Sbjct: 60 ALALPKLKQLF-HLPIIGVIEPGAKLAAATTRNKRIAVLGTKGTIESGAYQSAIHQLIPD 118
Query: 148 CHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204
I ++ +L S VEE Y K+ E K +E + D I+L CTHYPL
Sbjct: 119 AIIFPIACPLLVSLVEEGFLYHSASKLIIQEYLKNLEKADV-------DTILLGCTHYPL 171
Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL---FLSGKPD 257
+ + ++ V +D++ + A+ + LL +HQ + HA+ F++ P+
Sbjct: 172 LKPLIEEIMGSSVTIIDSALTCAQTVKKLL---ESHQLVNSNQHAIHQYFVTDDPE 224
>gi|222054462|ref|YP_002536824.1| glutamate racemase [Geobacter sp. FRC-32]
gi|221563751|gb|ACM19723.1| glutamate racemase [Geobacter sp. FRC-32]
Length = 283
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 7/215 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSG+GGL VL+++ ++P+ IY+ D PYG + + + S ++
Sbjct: 4 KAIGVFDSGVGGLTVLKEIMKVLPQEDTIYLGDTARVPYGTKSPETVVRYSRQITSFLVS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ +L V+ACNTA + L+ F S+ +G + P ++AAA T+SG + ++ T T+
Sbjct: 64 RDIKML-VVACNTASAVSLTALKKEF-SIPIVGVIEPGARRAAAVTRSGKVGVIGTAGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + I + + + EE +I + ++G KE +
Sbjct: 122 KSSAYAKAIKRINPGIEVVTRACPLFVPLAEEGWIDNEIARLTAQTYLKGL---KE-ESV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTHYP++ + ++ V +D+++ A
Sbjct: 178 DTLVLGCTHYPILKGIIAEVMGDGVTLVDSAEETA 212
>gi|188994603|ref|YP_001928855.1| glutamate racemase [Porphyromonas gingivalis ATCC 33277]
gi|188594283|dbj|BAG33258.1| glutamate racemase [Porphyromonas gingivalis ATCC 33277]
Length = 274
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 30/242 (12%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SI IFDSG GGL +L ++R LMPEY+F+Y+ D+ PYGN + K + +
Sbjct: 1 MNSSIGIFDSGYGGLTILSEIRRLMPEYNFVYLGDNARSPYGNRSYEVVYKFTLQAVRKL 60
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTF-PSMAFLGAV-PAIKQAAAYTQSGLIS 124
+ P L ++ACNTA T+ + +L + P+ LG + P ++ T++ +
Sbjct: 61 FELGCP-LVILACNTASAKALRTIQQRDLPNMEDPTRRVLGIIRPTVEAVDEITRTKHVG 119
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIE 181
+L+T T+ HSY + ++ + V E AC + ++ E
Sbjct: 120 VLATQGTVSS-------HSYQLE-----IAKLFPEISVTEEACPMWVPLVETGESDSPGA 167
Query: 182 GCFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
FI K + D I+LACTHYPL+ ++L + + + +A + L
Sbjct: 168 DYFIRKHLDSIIAKDDTIDTIILACTHYPLLRPKMKRLLTPTIKLIAQGELVAHSLKDYL 227
Query: 235 PR 236
R
Sbjct: 228 SR 229
>gi|297544101|ref|YP_003676403.1| glutamate racemase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841876|gb|ADH60392.1| glutamate racemase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 264
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 113/255 (44%), Gaps = 34/255 (13%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+
Sbjct: 6 IGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61
Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Q V + VIACNT +I +S + + F + AA YT + I +++T T+
Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTV 118
Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVE-EYACGIKIKEDEIKKEIEG 182
++Y N+ I Y C + L+ + S + E A
Sbjct: 119 ESKSYEKNIKIIDKNIKVYQKACPEFVPLIEKGLYNSPIAFETAS--------------N 164
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
C E + D +VL CTHYPL++ V ++ V +D + +A + L R +
Sbjct: 165 CLKELRERDIDTLVLGCTHYPLMMEVIEEIVGENVKIVDPAIKLAYDVKDYLLRRDLFNI 224
Query: 243 RVFDDHALFLSGKPD 257
+ F+SG D
Sbjct: 225 QNIGKTKFFVSGDKD 239
>gi|294792937|ref|ZP_06758083.1| glutamate racemase [Veillonella sp. 6_1_27]
gi|294455882|gb|EFG24246.1| glutamate racemase [Veillonella sp. 6_1_27]
Length = 272
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 11 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEI-TYLACRIAETL 69
Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ QPV L VIACNT FT++ + S+ +G +K A ++S I I++T AT
Sbjct: 70 ER-QPVKLMVIACNT-FTVVALDAVRELVSVPVIGVSQGVKTAINKSKSKTIGIMATVAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--EDEIKKEIEGCFIEK-E 188
+ ++ IH +V+ H V ++ E A I+ +D +E+ ++E
Sbjct: 128 V-----NSHIHKHVALEVDHEV--LVWEQPCPELAGLIEQGHLDDYFVREVCKEYLEPLL 180
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
+ +V+VL CTH+P + + +L+ + ++D
Sbjct: 181 SREIEVVVLGCTHFPFVQPLLEELTSCRIQFID 213
>gi|257784875|ref|YP_003180092.1| glutamate racemase [Atopobium parvulum DSM 20469]
gi|257473382|gb|ACV51501.1| glutamate racemase [Atopobium parvulum DSM 20469]
Length = 277
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 11/225 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+ + MP F Y D PYG + +R + +D+
Sbjct: 11 IGVFDSGVGGMSVLKHLVAQMPHETFHYFGDSAFAPYGTKPKEQIAQRSSVIAKKFIDEG 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA DELR+ +P ++ +G PA+K A G + +L+T ATL
Sbjct: 71 AKAL-VIACNTATAAAADELRAAYPYLSIVGVEPALKPAVTAYPHGTVIVLATKATLSLQ 129
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL S+ H I + E + +++ K + G + D +
Sbjct: 130 KYHNL----ESRLHPSAKVISIPGEGLVELIESGQTDSEQLHKRLTELLGGYTG-QVDAV 184
Query: 196 VLACTHYPLIVHVFRQLSP--WPVDWLDNSDSIARRARCLLPRIN 238
VL CTHYP I +Q+S V++ D A + + LL + N
Sbjct: 185 VLGCTHYPFIK---KQISSVLGNVEFFDGGAGAAHQLKRLLKQAN 226
>gi|227510206|ref|ZP_03940255.1| glutamate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190411|gb|EEI70478.1| glutamate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 264
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 7/212 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+++ ++P +I+V D PYG ++K L +D + K
Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRK-LTKRIADYMLKQNVK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNT+ D L+ P + +G + P + A A T + I +++T T+
Sbjct: 60 MFVIACNTSTAASLDYLKKILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVNSGVY 118
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+I S + ++ + + VE G ++ +++ ++ F +K D +VL
Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQL-AYFHDKP---IDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
CTH+P++ + ++ +D S A+
Sbjct: 175 GCTHFPVLETEIKDAVNSGINLIDPGISTAKN 206
>gi|212550932|ref|YP_002309249.1| glutamate racemase [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212549170|dbj|BAG83838.1| glutamate racemase [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 276
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 9/223 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K++ SI IFDSG GG +L+K+R+ +P Y F+Y+ D+ PYG + + +
Sbjct: 2 KVKGSIGIFDSGYGGFTILEKIRYRLPRYDFLYLGDNARAPYGTRSFEIVYEFTLQSVRK 61
Query: 71 ILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124
+ +K L ++ACNT+ T+ +++L S P LG + P ++ TQ+ I
Sbjct: 62 LFEK-GCHLVILACNTSSAKALRTIQQNDLPSIAPQKRLLGVIRPTVEAVGRLTQTRHIG 120
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L T T+ S + + + + S VE + +K+ I
Sbjct: 121 VLGTQGTILSGSYSIEMKRLFPDIVVTGEACPMWVSLVENGEYDRPGADYFVKQHINS-- 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
I + D +VL CTHYPL+ +Q P V L +A
Sbjct: 179 ILNKDPLIDTLVLGCTHYPLLETKIKQYLPKSVSILSQGKYVA 221
>gi|89889534|ref|ZP_01201045.1| glutamate racemase [Flavobacteria bacterium BBFL7]
gi|89517807|gb|EAS20463.1| glutamate racemase [Flavobacteria bacterium BBFL7]
Length = 262
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 6/238 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG V +++ L+P + IY+AD PYG + +L ++ L
Sbjct: 7 IGFFDSGVGGTSVWKEVVQLLPHENTIYLADSKHAPYGRKSKEEIT-QLCIKNTEYLLSR 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L + CNTA T LR + + F+G PAIK AA + +G + IL+T TL
Sbjct: 66 GCKLIAVPCNTATTNSISYLRGHY-DIPFIGIEPAIKPAALNSATGKVGILATKGTL--- 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
TS L + + + I+ + + E K +E++ + D +
Sbjct: 122 -TSELFNRTQRAFTKDVNTIEIVGTGIVELIESGKKDSEEMRNLLVSITEPFMISGIDYL 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
VL C+HYP I + ++L P V +D+ ++AR+ +L N ++ H S
Sbjct: 181 VLGCSHYPYIKDMLQELLPSRVKIIDSGAAVARQTYHILKEFNLLNDQISSGHHELFS 238
>gi|89895983|ref|YP_519470.1| hypothetical protein DSY3237 [Desulfitobacterium hafniense Y51]
gi|89335431|dbj|BAE85026.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 295
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 14/258 (5%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K Q+ I +FDSG+GGL V++++ +P+ IY D PYGN L + S
Sbjct: 16 KLAQHVIGMFDSGVGGLTVMKEIVTQLPDVQIIYFGDTARVPYGNRSREELIHFGEEIIS 75
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
++++ + V+ACNT+ LR F ++ +G + P K A T +G I +++T
Sbjct: 76 FLIEQGAEAI-VVACNTSSANAVPVLREQF-NLPLIGTIEPGAKAAIQATATGNIGLIAT 133
Query: 129 PATLRRTYTSNLIHSYVSQCH----IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
AT+R S+ + +S+ I LV + V G+ E +
Sbjct: 134 EATVRSKAYSSAVRRILSKRRGGHAIELVKAQACPLFVPLVEAGLS-HSPEARGIARTYL 192
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-- 242
+ + D ++L CTHYP + V +++ + +D + ++ + +L ++ ++
Sbjct: 193 APIQEAQVDALILGCTHYPFLAPVIQEILGEEIILVDPAQAMTEELKEVLKQLEYNRESG 252
Query: 243 ----RVFDDHALFLSGKP 256
+ H F+SG P
Sbjct: 253 QETHKAPGHHRFFVSGDP 270
>gi|261749317|ref|YP_003257002.1| glutamate racemase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
gi|261497409|gb|ACX83859.1| glutamate racemase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
Length = 271
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSGIGGL++ ++++ MP IY D PYGN ++ M + S + +K
Sbjct: 11 IFDSGIGGLLIAKEIKNYMPNECIIYFGDTKNMPYGNKSKEFIRNHSMKIASFLYEKKCK 70
Query: 78 VLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACN+ + D ++ F + + I + S I I++TPAT+R +
Sbjct: 71 AI-VIACNSIVSNALDVIQKNFLKKILIFNVIEPIVKNKVLISSKRIGIMATPATIRSNF 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I Y I +S+ +LA+ +E G + K+ K F + + D ++
Sbjct: 130 YQKNIKRYCPHLDIVQISTPLLATIIEN---GFEKKKINYLKNYLNHF---KSIKIDTLL 183
Query: 197 LACTHY 202
LACTHY
Sbjct: 184 LACTHY 189
>gi|326439557|ref|ZP_08214291.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064]
Length = 281
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 16/260 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + D G P+G + +R + + ++
Sbjct: 23 IALMDSGIGLLAAAAAVRGLRPDADLVLSQDPDGMPWGPRTPEGVTERALAVAR-AAAEH 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
P ++ACNTA LR+ P++ +G VPAIK AA G I+I +TPAT
Sbjct: 82 APDALIVACNTATVHALPALRAALEPAIPVIGTVPAIKPAA--VAGGPIAIWATPATTGS 139
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +LI + + V LA V+ +DE + + T
Sbjct: 140 PYQRDLIGRFAGAVDVAEVPCPGLADAVDH-------ADDEAIDRAVAAAAARTPRDTRA 192
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHY L+ R PV ++ ++A +A + + LSG
Sbjct: 193 VVLGCTHYELVAERIRDAIGTPVALHGSAGAVAAQALRRIGAAPAPGATASGTLTVLLSG 252
Query: 255 K----PDIAMRRLMQGFGLK 270
+ PD A+ R +G GL+
Sbjct: 253 RASALPDRAL-RYAEGRGLQ 271
>gi|289167204|ref|YP_003445471.1| glutamate racemase, COG0796 [Streptococcus mitis B6]
gi|288906769|emb|CBJ21603.1| glutamate racemase, COG0796 [Streptococcus mitis B6]
Length = 264
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVESDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|219670410|ref|YP_002460845.1| glutamate racemase [Desulfitobacterium hafniense DCB-2]
gi|219540670|gb|ACL22409.1| glutamate racemase [Desulfitobacterium hafniense DCB-2]
Length = 295
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 14/258 (5%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K Q+ I +FDSG+GGL V++++ +P+ IY D PYGN L + S
Sbjct: 16 KLAQHVIGMFDSGVGGLTVMKEIVTQLPDVQIIYFGDTARVPYGNRSREELIHFGEEIIS 75
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
++++ + V+ACNT+ LR F ++ +G + P K A T +G I +++T
Sbjct: 76 FLIEQGAEAI-VVACNTSSANAVPVLREQF-NLPLIGTIEPGAKAAIQATATGNIGLIAT 133
Query: 129 PATLRRTYTSNLIHSYVSQCH----IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
AT+R S+ + +S+ I LV + V G+ E +
Sbjct: 134 EATVRSKAYSSAVRRILSKRRGGHAIELVKAQACPLFVPLVEAGLS-HSPEARGIARTYL 192
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-- 242
+ + D ++L CTHYP + V +++ + +D + ++ + +L ++ ++
Sbjct: 193 APIQEAQVDALILGCTHYPFLAPVIQEILGEEIILVDPAQAMTEELKEVLKQLEYNRESG 252
Query: 243 ----RVFDDHALFLSGKP 256
+ H F+SG P
Sbjct: 253 QETHKAPGHHRFFVSGDP 270
>gi|297567944|ref|YP_003686914.1| Glutamate racemase [Meiothermus silvanus DSM 9946]
gi|296852393|gb|ADH65406.1| Glutamate racemase [Meiothermus silvanus DSM 9946]
Length = 234
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL L+++R L P+ ++Y+AD PYG +++R+ + +L+
Sbjct: 2 TVGVFDSGVGGLAALEELRRLRPDLDYLYLADTAWAPYGPLPPERIRERVEQVGGFLLEA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA L L A+ +QAA + ++ +T AT R
Sbjct: 62 GAEAL-VVACNTASAWGAGALEGL--RAPVLEAIGPTRQAAGREEG--TAVWTTAATWR- 115
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
S V + ++ + +LA VEE +D + + + G ++E+ T
Sbjct: 116 --------SGVYRGVGEVIPTPLLAPLVEEGHL-----DDRVAEAVVGAYLERLPGGTRR 162
Query: 195 IVLACTHYPLIVHVFRQLSP 214
+VL CTHY + + +L+P
Sbjct: 163 LVLGCTHYSFLRPLLSRLAP 182
>gi|313675673|ref|YP_004053669.1| glutamate racemase [Marivirga tractuosa DSM 4126]
gi|312942371|gb|ADR21561.1| glutamate racemase [Marivirga tractuosa DSM 4126]
Length = 270
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 17/226 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL V K++ LMP +Y D PYG+ A++ + + +D+L +
Sbjct: 9 IGIFDSGIGGLTVAHKVKELMPNESMVYFGDIAHLPYGDKSAAAIQAYSIKV-TDVLLQQ 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV--PAIKQAAAYTQSGLISILSTPATLR 133
L +IACN+A + + +R S A + V P ++ + + + ++ T +
Sbjct: 68 GCKLILIACNSASSAAFELVREYVGSKAKVFNVIDPVVEHVSQHYNKQKVGLIGT----K 123
Query: 134 RTYTSNLIHSYVSQCH----IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+T SN S + Q + + +++ +L +EE E+ I +I ++ E
Sbjct: 124 QTVNSNAYESRLKQLNPDIELKSLATPLLVPMIEE-----GFFENRISHDIIEAYLHDEA 178
Query: 190 -KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + ++L CTHYPLI + + VD LD++ +A+R + L
Sbjct: 179 LEEIEALILGCTHYPLIKNEIDKFYGGKVDILDSATIVAKRLQQFL 224
>gi|223038331|ref|ZP_03608625.1| glutamate racemase [Campylobacter rectus RM3267]
gi|222880188|gb|EEF15275.1| glutamate racemase [Campylobacter rectus RM3267]
Length = 519
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N +K L+ I FDSGIGGL VL + F+Y AD+ PYG + A RL
Sbjct: 8 NLTLDKDLK--IAFFDSGIGGLSVLAEALGRFSGAEFLYFADEDHVPYGT-KSRAEIVRL 64
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
L + VIACNTA + ELRS F S+ +G PA+K AA S
Sbjct: 65 SLDAVGFLVSHGAEAVVIACNTATSAAISELRSAF-SVPIIGMEPAVKLAADRFGSRPTL 123
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+++TP T+ + L+ +C I S+ L R+ E+A ++ ++ ++G
Sbjct: 124 LIATPLTIAGEKLARLVGRL--ECEIW---SLPL-PRLVEFAQDLEFDSPAVRTYLQGEL 177
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ E R +VL CTH+ V R++ P V +D D R
Sbjct: 178 GKFELARLGSLVLGCTHFNYFKDVLREILPPHVRIIDGIDGTLNR 222
>gi|167043360|gb|ABZ08063.1| putative Asp/Glu/hydantoin racemase [uncultured marine
crenarchaeote HF4000_ANIW141O9]
Length = 253
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 20/259 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG G L +++ ++ + + +Y AD FPYG L K + + + +K+
Sbjct: 4 IAVFDSGFGSLSIIKPIQQAI-KSDIVYFADQKNFPYGKKSKSELTKIITKTVNMLEEKF 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L VI NT L++ ++ + +P IK+AA + +G ++IL+T A +R
Sbjct: 63 EPDLIVIGSNTPSLLVEINKKN------IVKVLPPIKKAAKISMTGNVAILATLALIRSK 116
Query: 136 YTSNLIHSYVSQCHIHL--VSSMILASRVEE--YACGIKIKEDEIKKEIEGCFIEKEGKR 191
S + H++L + + L VEE + K+ E ++K + F++
Sbjct: 117 KLSEYVRKSRLPKHVNLKRIDATQLVRLVEEGKFLDNRKLCEKTVRKVLSKPFLKSN--- 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV +L+ TH P ++ ++ P + ++D ++ IA++ R +I + + +F
Sbjct: 174 VDVAILSSTHLPFLLPFLKKQFPN-ITFVDPANEIAQKVR----KIVAKKPSKTNTMKIF 228
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S P R L Q G+K
Sbjct: 229 TSSDPKKFQRYLWQ-IGIK 246
>gi|325263159|ref|ZP_08129894.1| glutamate racemase [Clostridium sp. D5]
gi|324031552|gb|EGB92832.1| glutamate racemase [Clostridium sp. D5]
Length = 277
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 22/256 (8%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E K I +FDSG+GGL V+++M +P + +Y D PYG+ + + +
Sbjct: 5 AECKKTAPIGVFDSGVGGLTVVREMIRQLPNENIVYFGDTARVPYGSKSQNTIIR----- 59
Query: 68 FSDILDKY----QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122
FS+ + ++ + VIACNTA L D +R F + LG V P + A TQ+
Sbjct: 60 FSEQIIRFLKKKKVKAIVIACNTASALALDAVRDEF-EVPILGVVIPGARAAVEATQNLK 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ ++ T AT++ + +IH + + + + VEE KE ++ +EI
Sbjct: 119 VGVVGTDATVQSGMYTKIIHGMNPEITVIEKACPLFVPLVEE-----GFKEHKVTQEIID 173
Query: 183 CFIEKEGKRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---I 237
++E KRTD+ ++L CTHYPL+ R + ++ + A + LL +
Sbjct: 174 FYLESI-KRTDIDAMILGCTHYPLLRSKIRAYMGDGIQIVNPAYETAMDLKKLLKEQDMV 232
Query: 238 NTHQTRVFDDHALFLS 253
N Q + + F+S
Sbjct: 233 NDGQKAPYSRYEFFVS 248
>gi|189462010|ref|ZP_03010795.1| hypothetical protein BACCOP_02682 [Bacteroides coprocola DSM 17136]
gi|189431224|gb|EDV00209.1| hypothetical protein BACCOP_02682 [Bacteroides coprocola DSM 17136]
Length = 276
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 9/234 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R L+P+Y +IY+ D+ PYG + + + + D
Sbjct: 8 IGVFDSGYGGLTILDKIRELLPQYDYIYLGDNARTPYGTRSFEVVYEFTLQAVRKLFDLG 67
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
P L ++ACNTA ++ +++L + LG + P + T S + +L+T
Sbjct: 68 CP-LVILACNTASAKALRSIQENDLPHIDATRRVLGVIRPTAECIGDITVSRHVGLLATA 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H + V+ + VE D +E +E++
Sbjct: 127 GTVKSQSYPIELHKLFPDIQLTGVACPLWVPLVENNEFN-SPGADYFVQEYINQLLEQDP 185
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
K D I+L CTHYPL++ RQ +P + + + +A + L R + +TR
Sbjct: 186 K-IDTIILGCTHYPLLIEKIRQFTPPHIRLVAQGEYVAASLKDYLRRHSEIRTR 238
>gi|291288784|ref|YP_003505600.1| glutamate racemase [Denitrovibrio acetiphilus DSM 12809]
gi|290885944|gb|ADD69644.1| glutamate racemase [Denitrovibrio acetiphilus DSM 12809]
Length = 256
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 7/230 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I IFDSG+GGL V + + PE Y+ D PYG+ + + ++D
Sbjct: 2 AIGIFDSGVGGLTVYKTISEHFPELDMHYLGDTARVPYGSRSQETVINYSLQCAGFLVDN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ ++ACNTA + D +R F + +G V P A T++ I ++ T AT+R
Sbjct: 62 FDIDTIIVACNTASSYAIDHIRKKF-KVNVIGVVEPGSYSALQVTENNKIGVIGTRATVR 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + S I + + VEE I + ++ ++ D
Sbjct: 121 SGSYVKALKAIRSDVEITQTACPLFVPIVEEMLVDTDIADMVVRHYLDNMMTTG----AD 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
++L CTHYPL+ +V + P + +D+S++I L +N H R
Sbjct: 177 TLILGCTHYPLLKNVIAKFYP-DIKIVDSSEAIIDCINELKLNVNQHSKR 225
>gi|228987734|ref|ZP_04147845.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228772008|gb|EEM20463.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 269
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 118/251 (47%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K+TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + +
Sbjct: 174 KKTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 233 -SDHLFLTTGK 242
>gi|306834137|ref|ZP_07467257.1| glutamate racemase [Streptococcus bovis ATCC 700338]
gi|304423710|gb|EFM26856.1| glutamate racemase [Streptococcus bovis ATCC 700338]
Length = 269
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 18/255 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + ++ V ACNTA + + ++ + LG + P A T++G
Sbjct: 53 YTWELVNFLLTQNVKMI-VFACNTATAVAWEAVKEKL-DIPVLGVILPGSSAAIKSTRNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I S Q ++ +S A VE ++ KK +
Sbjct: 111 KIGVIGTPMTIKSDIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSG 254
+R DD HA + +
Sbjct: 226 SRTQDDVTHAFYTTA 240
>gi|255009918|ref|ZP_05282044.1| putative glutamate racemase [Bacteroides fragilis 3_1_12]
gi|313147706|ref|ZP_07809899.1| glutamate racemase [Bacteroides fragilis 3_1_12]
gi|313136473|gb|EFR53833.1| glutamate racemase [Bacteroides fragilis 3_1_12]
Length = 280
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 9/218 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILSKIREALPDYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA T+ + L PS LG + P ++ + TQ+ + +L+T
Sbjct: 71 GCHLVILACNTASAKALRTIQMNNLPDIDPSRRVLGVIRPTVECIGSITQTRHVGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ IH + + + VE + + I+K I + K+G
Sbjct: 131 GTIKSESYPLEIHKLFPDIKVSGEACPMWVPLVENNEANGEGTDFFIRKYIHN-LLAKDG 189
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ D I+L CTHYPL++ +Q P + + + +A
Sbjct: 190 Q-IDTIILGCTHYPLLLPKIQQFVPQSMKVVAQGEYVA 226
>gi|307707605|ref|ZP_07644086.1| glutamate racemase [Streptococcus mitis NCTC 12261]
gi|307616318|gb|EFN95510.1| glutamate racemase [Streptococcus mitis NCTC 12261]
Length = 264
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVHSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|78187589|ref|YP_375632.1| glutamate racemase [Chlorobium luteolum DSM 273]
gi|78167491|gb|ABB24589.1| glutamate racemase [Chlorobium luteolum DSM 273]
Length = 271
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I IFDSG+GGL V++ +R +P +Y D PYG + +R + L
Sbjct: 8 ESPIGIFDSGVGGLTVVKAVRHALPGERILYFGDTARVPYGP-KSQVTIRRYAEDDTQAL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++QP + ++ACNT L D + + LG + A A T++ I ++ T AT
Sbjct: 67 LRHQPKMIIVACNTVSALALDVVEHAADPLPVLGVLEAGATLAVEVTKNRRIGVIGTQAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF-IEKEGK 190
+ + I+ Q + + + EE + DE + I + + G+
Sbjct: 127 VCSNAYAYAINRLDPQIEVFSRACPLFVPLAEE-----GMVNDEATRLIARQYLLPLVGE 181
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYP++ V + V +D+++++A R +L
Sbjct: 182 GIDTLVLGCTHYPILRRVIEETVGPAVRIIDSAEAVATRTETML 225
>gi|300932724|ref|ZP_07147980.1| glutamate racemase [Corynebacterium resistens DSM 45100]
Length = 270
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 6/213 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + L+P + +Y+ D PYG+ + A ++L +D L +
Sbjct: 7 IGIFDSGVGGLTVARAVVDLLPRENIVYIGDTANSPYGD-KPLAQVRQLSIAIADELVER 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACN+A + + R +P +PA+++A A T++G + ++ T AT+
Sbjct: 66 GCKMIVVACNSASSAFIRDARERYPVPVIEVILPAVRRAVAATRNGKVGVIGTHATVTSG 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L + + ++ V++ V GI +I E + D +
Sbjct: 126 SYQDL---FAASPNVE-VTAQACPQFVPFVERGITTGR-QIVGLAENYLEPLKDAGVDTV 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
VL CTHYPL+ V + + V ++++D A+
Sbjct: 181 VLGCTHYPLLAGVVQLVMGDDVTLVNSADETAK 213
>gi|91202612|emb|CAJ72251.1| similar to glutamate racemase [Candidatus Kuenenia stuttgartiensis]
Length = 266
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 9/229 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG+G L +++++R +P ++IY+AD FPYG L + +
Sbjct: 3 IDDPIAIFDSGVGSLSIIKEIRNSLPGENYIYLADKKHFPYGKKTHDELLLIIRNTIEYL 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ P L V+A NT + EL+ ++ +G P + +A + +++G I+IL+T T
Sbjct: 63 SKNFTPKLIVLASNTPSIQVLHELKKG--AVDVIGVFPPVNEAVSVSKTGHIAILATQNT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLV----SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
+ + IHS ++ S M+ ++ K K I E E +E+
Sbjct: 121 ILSSELDEYIHSQEMPASAKIIKWNASRMVDLVETGDFLSN-KEKSLRIISE-ELSLLEE 178
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
D I L+ TH P + F L P + +D + +A + + LL R
Sbjct: 179 TDNMVDTITLSSTHLPFLNEYFTLLRPC-LHLIDPAKIVAGKVKSLLER 226
>gi|293376564|ref|ZP_06622792.1| glutamate racemase [Turicibacter sanguinis PC909]
gi|325839373|ref|ZP_08166812.1| glutamate racemase [Turicibacter sp. HGF1]
gi|292644790|gb|EFF62872.1| glutamate racemase [Turicibacter sanguinis PC909]
gi|325490493|gb|EGC92809.1| glutamate racemase [Turicibacter sp. HGF1]
Length = 257
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGGL VL + +P + ++Y AD + PYG ++ + ++ K
Sbjct: 3 IGFFDSGIGGLTVLSEALKRLPHHDYLYYADTLHAPYGPKPKEEVRGYIFEAIEFLVRKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATLR 133
++ VIACNTA ++ ++LR + + +G PA+K A + Q +L +TP TL+
Sbjct: 63 ADII-VIACNTATSIAVNDLREKY-QIPIIGMEPAVKPAIEWVQESGKRVLVTATPLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+LI + Q H V+ ++ + +A + + ++ ++ +
Sbjct: 121 EEKLHHLIER-LDQSH---VTDLLPLPDLVRFAESFDFSPETVVPYLKKQLVDYQISDYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
IVL CTH+PL F+++ ++ +D S
Sbjct: 177 AIVLGCTHFPLFASSFKEVFEPGIELIDGS 206
>gi|237715314|ref|ZP_04545795.1| glutamate racemase [Bacteroides sp. D1]
gi|262405155|ref|ZP_06081705.1| glutamate racemase [Bacteroides sp. 2_1_22]
gi|294643545|ref|ZP_06721351.1| glutamate racemase [Bacteroides ovatus SD CC 2a]
gi|294807052|ref|ZP_06765871.1| glutamate racemase [Bacteroides xylanisolvens SD CC 1b]
gi|229444623|gb|EEO50414.1| glutamate racemase [Bacteroides sp. D1]
gi|262356030|gb|EEZ05120.1| glutamate racemase [Bacteroides sp. 2_1_22]
gi|292641120|gb|EFF59332.1| glutamate racemase [Bacteroides ovatus SD CC 2a]
gi|294445751|gb|EFG14399.1| glutamate racemase [Bacteroides xylanisolvens SD CC 1b]
Length = 280
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ IH + + + + S VE + + I+K I+ +
Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLL--SKD 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D ++L CTH+P+++ RQ P + + + +A + L R
Sbjct: 189 PQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKR 235
>gi|308177066|ref|YP_003916472.1| glutamate racemase [Arthrobacter arilaitensis Re117]
gi|307744529|emb|CBT75501.1| glutamate racemase [Arthrobacter arilaitensis Re117]
Length = 307
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +YV D PYG ++ + + +++D
Sbjct: 19 IGIFDSGVGGLTVARAIIDQLPGESLVYVGDTANSPYGPLPIAQVRANALGVMDELVDGG 78
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L VIACN+A + + R + + + V PA+++A A T++G I I+ T AT
Sbjct: 79 VKLL-VIACNSASAAVLRDARERYTARYGIPVVEVIQPAVRRAVAGTKNGKIGIIGTQAT 137
Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKE 188
+ R Y ++ + ++ VS++ VE GI + EI +E +
Sbjct: 138 VGSRAYED----AFAAAPNLQ-VSTVACPRFVEFVESGITAGAELLEIAQEY---LAPLQ 189
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ D +VL CTHYPL+ V + V + +++ A+
Sbjct: 190 AAQVDTLVLGCTHYPLLTGVISYVMGDSVTLVSSAEETAK 229
>gi|304384311|ref|ZP_07366722.1| glutamate racemase [Prevotella marshii DSM 16973]
gi|304334627|gb|EFM00909.1| glutamate racemase [Prevotella marshii DSM 16973]
Length = 278
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 19/226 (8%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFS 69
+I +FDSG GGL +L ++R +P Y +IY+ D+ PYG+ + ++ +M LF+
Sbjct: 8 GAIGVFDSGYGGLTILHEIRQQLPMYDYIYIGDNARAPYGSRSFDVVYEFTRQAVMKLFA 67
Query: 70 DILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123
L ++ACNTA T+ + +L +T+PS LG + P + T + +
Sbjct: 68 QGCR-----LVILACNTASAKALRTIQQHDLPTTYPSRRVLGVIRPTAEVIGDITTTRHV 122
Query: 124 SILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I++TP T++ R+Y + Y + + + A+ VE K + +KK ++
Sbjct: 123 GIVATPGTIKSRSYEMEIGKLY-PDIIVTGQACPLWAAIVEANEADSKGADYFVKKRLDE 181
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ + D ++L CTHYPL++ R+ P V + +AR
Sbjct: 182 --LMSKDPHIDSLILGCTHYPLLLSKIRKHLPASVHIIPQGCYVAR 225
>gi|210623229|ref|ZP_03293668.1| hypothetical protein CLOHIR_01618 [Clostridium hiranonis DSM 13275]
gi|210153766|gb|EEA84772.1| hypothetical protein CLOHIR_01618 [Clostridium hiranonis DSM 13275]
Length = 267
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 9/233 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL++++ ++P +Y D PYG + K + +L
Sbjct: 3 KRGIGVFDSGLGGLTVLKEIKKILPNEDLVYFGDTARVPYGPRSKETIMKYTFQAINFLL 62
Query: 73 DKYQPVLSVIACNTAF--TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
K + VIACNTA +L++ + + P + + A + AAA T++G + I+ T
Sbjct: 63 TKDVKAI-VIACNTATARSLVEAQEKYDIPIIGVIEA--GARTAAASTKNGKVGIIGTEG 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I + ++ + + VEE ++ K+ ++ E E K
Sbjct: 120 TIKSKAYNAEIKKIDKRIKVYGKACSLFVPIVEEGWANTEVARLTAKEYLK----ELEEK 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
D IVL CTHYPL+ + V ++ + A + +L N T+
Sbjct: 176 DVDSIVLGCTHYPLLKRTIGEEVGMEVKLVNPARETAIDLKNILIEKNLLNTK 228
>gi|319938692|ref|ZP_08013056.1| glutamate racemase [Streptococcus anginosus 1_2_62CV]
gi|319811742|gb|EFW08008.1| glutamate racemase [Streptococcus anginosus 1_2_62CV]
Length = 264
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPADQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K ++ V+ACNTA ++ +E++ + LG + P A +Q G
Sbjct: 53 YTWQLVQFLLTKNVKMI-VLACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKASQHG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I I+ TP T++ I + + + +S VE I KK +
Sbjct: 111 KIGIIGTPMTIQSDIYRQKIERLLPEVEVTSLSCPKFVPLVESNELSSSIT----KKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ +GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 167 ESLMPLKGK-VDTLVLGCTHYPLLKPIIQNVMGPTVKLIDSGAECVRDISVLLNYFEINH 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|295397445|ref|ZP_06807532.1| glutamate racemase [Aerococcus viridans ATCC 11563]
gi|294974346|gb|EFG50086.1| glutamate racemase [Aerococcus viridans ATCC 11563]
Length = 287
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWEDHALKKRLMF 66
E + I DSG+GGL V+++ +P IY+ D+ PYG + E+ A M
Sbjct: 7 EVNMNRPIGFLDSGVGGLTVVKEAMRQLPNESIIYIGDNARCPYGPRSVEEIAAFTNQMV 66
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
F +L K +L VIACNTA + DE++ S+ +G + P + A YT++G I +
Sbjct: 67 DF--LLTKDIKLL-VIACNTATAVALDEIKQRV-SIPVIGVIQPGARAANKYTKNGKIGV 122
Query: 126 LSTPATLRR-TYTSNLIH--------SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
L T T++ Y NL+ S + LV S ++YA +
Sbjct: 123 LGTEGTIKSGMYLENLLQKNKDLNTTSLACPAFVPLVES-------QQYATPLA------ 169
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
KK I + K D ++L CTHYPL+ ++ V +D+ LL
Sbjct: 170 KKVIAETLAPIKNKGLDTVILGCTHYPLLRDTIQKTLGHTVKLIDSGQETISDVSILL 227
>gi|226311374|ref|YP_002771268.1| glutamate racemase [Brevibacillus brevis NBRC 100599]
gi|226094322|dbj|BAH42764.1| probable glutamate racemase [Brevibacillus brevis NBRC 100599]
Length = 270
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 7/217 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I + DSG+GGL V +++ +PE +YV D+ PYG+ ++ F D +
Sbjct: 4 ERAIAVIDSGVGGLTVAKEVMRQLPEERIVYVGDNARCPYGSKSPEEIRT-YSFQMIDYV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ VIACNTA ++ +E P + +G + P + A T++G I ++ T T
Sbjct: 63 MRTPLKALVIACNTATAVVLEEAIGDLP-LPVIGVIEPGARAAVQVTKNGRIGVIGTETT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + ++ ++ VE + + + + KE F+ ++
Sbjct: 122 IRTKAYERALLRIQPDLYVAGMACPAFVPLVESHMANTE-EARRVVKETLAPFLHED--- 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYPL+ + ++ V +++++ AR
Sbjct: 178 LDTLILGCTHYPLLAPIISEVMGDRVRLINSAEETAR 214
>gi|256750841|ref|ZP_05491725.1| glutamate racemase [Thermoanaerobacter ethanolicus CCSD1]
gi|256750176|gb|EEU63196.1| glutamate racemase [Thermoanaerobacter ethanolicus CCSD1]
Length = 264
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 32/254 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+
Sbjct: 6 IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61
Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Q V + VIACNT +I +S + + F + A YT + I +++T T+
Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAVLYTINKKIGVIATTRTV 118
Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++Y N+ I Y C + L+ + S + Y K C
Sbjct: 119 ESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPI-AYETASK------------C 165
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E + K D +VL CTHYPL+ V ++ V +D + +A + L + + +
Sbjct: 166 LKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQ 225
Query: 244 VFDDHALFLSGKPD 257
+ F+SG D
Sbjct: 226 IRGKAEFFVSGDKD 239
>gi|148984333|ref|ZP_01817628.1| glutamate racemase [Streptococcus pneumoniae SP3-BS71]
gi|149003922|ref|ZP_01828736.1| glutamate racemase [Streptococcus pneumoniae SP14-BS69]
gi|147758062|gb|EDK65067.1| glutamate racemase [Streptococcus pneumoniae SP14-BS69]
gi|147923622|gb|EDK74735.1| glutamate racemase [Streptococcus pneumoniae SP3-BS71]
gi|301800660|emb|CBW33304.1| glutamate racemase [Streptococcus pneumoniae OXC141]
Length = 264
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG + +
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIGE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|166368300|ref|YP_001660573.1| glutamate racemase [Microcystis aeruginosa NIES-843]
gi|226722987|sp|B0JGW5|MURI_MICAN RecName: Full=Glutamate racemase
gi|166090673|dbj|BAG05381.1| glutamate racemase [Microcystis aeruginosa NIES-843]
Length = 283
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 20/263 (7%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL VL+++ +P+ +Y AD PYG + + ++ + + + +
Sbjct: 7 SPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGTRSKGEIIEFVLEILTWMSE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ ++ ++ACNT+ L +E+++ F + LG + P K A + I ++STPAT
Sbjct: 67 RRVKMV-IMACNTSSALALEEVQAEFKDLPILGVILPGAK--TAVQKGKRIGVISTPATA 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVS-----SMILASRV-EEYACGIKIKEDEIKKEIEGCFIE 186
+ I + + +I A+R+ + Y + ++ ++ E
Sbjct: 124 KSNAYKQAIQEIDPTAQVWQIPCPEFVPLIEANRIFDPYTTQVA------REYLQPLLAE 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D +V CTHY + V R+L P V +D + S+ R A L +
Sbjct: 178 N----IDTLVYGCTHYRHLSPVLRRLLPSSVRLVDPAASVVRAAEKELELLGLKNPETPL 233
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
+SG PD R Q G
Sbjct: 234 PTNFAVSGDPDTFARLSRQWLGF 256
>gi|34540498|ref|NP_904977.1| glutamate racemase [Porphyromonas gingivalis W83]
gi|34396811|gb|AAQ65876.1| glutamate racemase [Porphyromonas gingivalis W83]
Length = 274
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 30/242 (12%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ SI IFDSG GGL +L ++R LMPEY+F+Y+ D+ PYGN + K + +
Sbjct: 1 MNPSIGIFDSGYGGLTILSEIRKLMPEYNFVYLGDNARSPYGNRSYEVVYKFTLQAVRKL 60
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTF-PSMAFLGAV-PAIKQAAAYTQSGLIS 124
+ P L ++ACNTA T+ + +L + P+ LG + P ++ T++ +
Sbjct: 61 FELGCP-LVILACNTASAKALRTIQQRDLPNMEDPTRRVLGIIRPTVEAVDEITRTKHVG 119
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIE 181
+L+T T+ HSY + ++ + V E AC + ++ E
Sbjct: 120 VLATQGTVSS-------HSYQLE-----IAKLFPEISVTEEACPMWVPLVETGESDSPGA 167
Query: 182 GCFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
FI K + D I+LACTHYPL+ ++L + + + +A + L
Sbjct: 168 DYFIRKHLDSIIAKDDTIDTIILACTHYPLLRPKMKRLLTPTIKLIAQGELVAHSLKDYL 227
Query: 235 PR 236
R
Sbjct: 228 SR 229
>gi|22298004|ref|NP_681251.1| glutamate racemase [Thermosynechococcus elongatus BP-1]
gi|22294182|dbj|BAC08013.1| glutamate racemase [Thermosynechococcus elongatus BP-1]
Length = 297
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSG+GGL VLQ ++ +P+ F+Y D PYG ++R S+IL
Sbjct: 15 GAIGVFDSGVGGLTVLQALQSRLPQESFLYFGDTARLPYGT------RRR-----SEILQ 63
Query: 74 KYQPVL----------SVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGL 122
+ +L +V+ACNT+ L ++RS F LG VP K A T
Sbjct: 64 YVREILRWMHAQGVKMAVMACNTSSALALTQVRSEF-CFPILGLIVPTAK--IAVTLGKR 120
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++TPAT++ + + + I V+ VE ++ D + + +
Sbjct: 121 IGVIATPATVKSGAYARALQEFSPTVAIAQVACPEFVPLVESNC----LEGDRVHRIVRQ 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
DV++ CTHYP + HV Q P V LD
Sbjct: 177 TLSPLVEFDPDVLIYGCTHYPHLRHVIEQYVPTTVHHLD 215
>gi|115373706|ref|ZP_01461000.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1]
gi|310823643|ref|YP_003956001.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1]
gi|115369253|gb|EAU68194.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1]
gi|309396715|gb|ADO74174.1| Glutamate racemase [Stigmatella aurantiaca DW4/3-1]
Length = 270
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 13/225 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL VL+ + +P + +Y+ D PYG + + + +L+
Sbjct: 7 SPIGVFDSGVGGLTVLKALMERLPHENTLYLGDTARVPYGTKSGEVVTRYSLKNAQFLLE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
K +L V+ACNTA + L + S+ LG + P + A T+ G + ++ TP T+
Sbjct: 67 KGIKLL-VVACNTASAVALPALSAAL-SVPVLGVIAPGAQAALRRTRGGGVGVIGTPGTI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE---KEG 189
R + + + + + + EE + E+ + ++ +EG
Sbjct: 125 RSGAYQRELQAADPKVQVKARACPLFVPLAEE-----GWTQGEVPALVAREYLADFAREG 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYPL+ + Q+ V +D++++ A LL
Sbjct: 180 --VDTLVLGCTHYPLLKDIIAQVVGPRVSLVDSAEATAEAVALLL 222
>gi|304403816|ref|ZP_07385478.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
gi|304346794|gb|EFM12626.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
Length = 269
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 11/226 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q I I DSG+GGL V +++ +P +Y D PYG + R D
Sbjct: 1 MQQPIAILDSGVGGLTVAKEVMRQLPREKIVYFGDTARTPYGPRPAGEV-VRFTKEIVDY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y P + V+ACNTA D+L+ S+ +G + P + A + T +G+I ++ T
Sbjct: 60 LIQYNPKMIVVACNTATAFALDDLKEMV-SVPVVGVIDPGARAALSRTNTGVIGVIGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+R + + HIH++S A VE+ + E ++
Sbjct: 119 TVRSGAYEHALKQLSP--HIHVISQACPAFVPLVEQG----NFRSTETFHTVQQALGYLR 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYP + ++ V + +++ R R +L
Sbjct: 173 EYPLDCMILGCTHYPFLSESISEVMGPEVALISSAEETVREIRAIL 218
>gi|294791442|ref|ZP_06756599.1| glutamate racemase [Scardovia inopinata F0304]
gi|294457913|gb|EFG26267.1| glutamate racemase [Scardovia inopinata F0304]
Length = 263
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 9/222 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V++++R +P ++ D PYG +K+ + +L +
Sbjct: 6 IGVFDSGMGGISVVRQIRQDLPHEDILFYGDSAHAPYGTKPTEQVKELSFAVTRHLLSRG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133
+ VIACNTA + +LRS+ S+ +G PA+K A + + +L+T TLR
Sbjct: 66 VKAI-VIACNTATSAAAPDLRSSL-SLPVIGMEPALKVACDRGEGKPQNVLVLATSLTLR 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGKRT 192
+ L+ IH + L S VE K+++ ++ K I +
Sbjct: 124 EKKFARLVEQVRGNNTIHTQACPDLVSLVESG----KVEDRDLAIKTITSYLKPYDLNSL 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+ + FRQ+ P V +D + + R +L
Sbjct: 180 DSVVLGCTHFIFYRNYFRQILPDSVAIIDGNAGTSHHVRTIL 221
>gi|116611238|gb|ABK03962.1| glutamate racemase [Arthrobacter sp. FB24]
Length = 312
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +YV D PYG ++ + + +++D
Sbjct: 6 IGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDELVDSG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L+ IACN+A + + R + + + + PA+++A A T+SG + ++ T AT
Sbjct: 66 VKLLT-IACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVAATRSGRVGVIGTSAT 124
Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189
+ R Y + HI V+ S VE GI + + E ++E
Sbjct: 125 IGSRAYEDTF--AAAPDLHITSVACPAFVSYVE---AGITTGPELLAVARE--YLEPLRT 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYPL+ V + V + +++ A+
Sbjct: 178 AGVDTVVLGCTHYPLLTGVISYVMGEDVTLVSSAEETAK 216
>gi|326390909|ref|ZP_08212460.1| glutamate racemase [Thermoanaerobacter ethanolicus JW 200]
gi|325993057|gb|EGD51498.1| glutamate racemase [Thermoanaerobacter ethanolicus JW 200]
Length = 264
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 32/254 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK IL+
Sbjct: 6 IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK----FAKQILNFM 61
Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Q V + VIACNT +I +S + + F + AA YT + I ++T T+
Sbjct: 62 REQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGAIATTRTV 118
Query: 133 R-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++Y N+ I Y C + L+ + S + Y K C
Sbjct: 119 ESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPI-AYETANK------------C 165
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E + K D +VL CTHYPL+ V ++ V +D + +A + L + + +
Sbjct: 166 LKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQ 225
Query: 244 VFDDHALFLSGKPD 257
+ F+SG D
Sbjct: 226 IRGKAEFFVSGDKD 239
>gi|313892611|ref|ZP_07826198.1| putative glutamate racemase [Dialister microaerophilus UPII 345-E]
gi|313119008|gb|EFR42213.1| putative glutamate racemase [Dialister microaerophilus UPII 345-E]
Length = 257
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK- 61
+DN P I I DSG+GGL V + +R PE I++ D PYG H +
Sbjct: 1 MDNRP--------IGIMDSGVGGLTVARVLRQKYPEESIIFIGDTANNPYGERTSHEINV 52
Query: 62 ---KRLMFLFSDILDKYQPVLSVIACNT-AFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
K FL S + + +IACNT F + K+ P +P + A
Sbjct: 53 LAGKMKKFLISKNVK-----MIIIACNTITFNVQKNFYDEKIPIEGMSLDLPHFENA--- 104
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
G I++ +TPAT+ N I I + LA +EE KI E +K
Sbjct: 105 ---GSITVFATPATINLHIHKNKIKEKFPNSKIEEMPCEGLAHAIEENNSREKITEI-LK 160
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
K IE +++ TD+ + ACTHYPL+ VF+++
Sbjct: 161 KIIE----KRKISPTDIGIFACTHYPLVEDVFKKI 191
>gi|72381894|ref|YP_291249.1| glutamate racemase [Prochlorococcus marinus str. NATL2A]
gi|123621455|sp|Q46LT2|MURI_PROMT RecName: Full=Glutamate racemase
gi|72001744|gb|AAZ57546.1| glutamate racemase [Prochlorococcus marinus str. NATL2A]
Length = 265
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 15/222 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG VL+K+ L P FIY+AD PYG + +KK + S +Y
Sbjct: 3 IGLFDSGIGGFTVLKKVIKLCPNNSFIYLADTARLPYGIKTTNEIKKIAEEISSWF--RY 60
Query: 76 QPVLS-VIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q + + ++ACNT + D L+ P +G+ AA+ Q + +L+TP+T+
Sbjct: 61 QKIDAFLVACNTTNAIALDILKKNLDIPVFDLIGS------AASTIQESRVGVLATPSTV 114
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +N I + + + +E I D+I G ++
Sbjct: 115 KTKAYTNAILEFKPKTFVIEQPCPAFVPMIEMD----NINSDDITDVATGYLQPLLKQKI 170
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++L C+HYPLI R++ P V +D +++++ + + +
Sbjct: 171 HSLILGCSHYPLIAPSLRKVLPSSVKLIDPAEALSFKLKLFI 212
>gi|17227590|ref|NP_484138.1| glutamate racemase [Nostoc sp. PCC 7120]
gi|11386941|sp|Q9L870|MURI_ANASP RecName: Full=Glutamate racemase
gi|6969397|gb|AAF33755.1|AF216288_2 putative glutamate racemase [Nostoc sp. PCC 7120]
gi|17135072|dbj|BAB77618.1| glutamate racemase [Nostoc sp. PCC 7120]
Length = 292
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ ++ + I +FDSG+GGL VL+++ +P IY D PYG + +
Sbjct: 13 GFSAQEPQRAPIGVFDSGVGGLTVLRQIYRQLPNESVIYFGDTARLPYGIRS----QAEI 68
Query: 65 MFLFSDILDKYQPV---LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
+ DILD Q + V+ACNT+ L D +R + LG + P K AA Q
Sbjct: 69 LTFVRDILDWMQQQHVKMVVMACNTSSALALDIVREEY-DFPILGVILPGAK--AAVQQG 125
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++STPAT + I + V +E+ +D E+
Sbjct: 126 KRIGVISTPATAKSNAYRQAIWEIDPNVEVWQVGCPEFVPLIEQNRI-----QDPYTTEV 180
Query: 181 EGCFIEKEGKR-TDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
++E ++ D +V CTHYPL+ V R L P V +D
Sbjct: 181 ARAYLEPLIQQDIDTLVYGCTHYPLLAPVLRSLLPPQVKIID 222
>gi|300859076|ref|YP_003784059.1| glutamate racemase [Corynebacterium pseudotuberculosis FRC41]
gi|300686530|gb|ADK29452.1| Glutamate racemase [Corynebacterium pseudotuberculosis FRC41]
Length = 297
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ IY+ D PYG+ +++ M + +++ +
Sbjct: 36 IGIFDSGVGGLTVARAIMEQLPQESVIYIGDTANSPYGSKPIAQVRELSMRIGDELVARG 95
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
++ VIACNTA + +LR + S+ +G + PA+++A A T++G I +L T T+
Sbjct: 96 CKMI-VIACNTATSAALRDLRERY-SIPVVGVILPAVRRAVAATRNGKIGVLGTQGTIAS 153
Query: 135 TYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
L + Y C + V I + R +I +G
Sbjct: 154 GAYQELFAASPGVEVYAQACPSFVSFVERGITSGR-------------QILGVTQGYTEG 200
Query: 187 KEGKRTDVIVLACTHYPLIVHVFR 210
+ D +VL CTHYPL+ V +
Sbjct: 201 LQSAGVDTLVLGCTHYPLLTGVIQ 224
>gi|329121243|ref|ZP_08249870.1| glutamate racemase [Dialister micraerophilus DSM 19965]
gi|327470177|gb|EGF15640.1| glutamate racemase [Dialister micraerophilus DSM 19965]
Length = 257
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK- 61
+DN P I I DSG+GGL V + +R PE I++ D PYG H +
Sbjct: 1 MDNRP--------IGIMDSGVGGLTVARVLRQKYPEESIIFIGDTANNPYGERTSHEINV 52
Query: 62 ---KRLMFLFSDILDKYQPVLSVIACNT-AFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
K FL S + + +IACNT F + K+ P +P + A
Sbjct: 53 LAGKMKKFLISKNVK-----MIIIACNTITFNVQKNFYDEKIPIEGMSLDLPHFENA--- 104
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
G I++ +TPAT+ N I I + LA +EE KI E +K
Sbjct: 105 ---GSITVFATPATINLHIHKNKIKEKFPNSKIEEMPCEGLAHAIEENNSREKITEI-LK 160
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
K IE +++ TD+ + ACTHYPL+ VF+++
Sbjct: 161 KIIE----KRKISPTDIGIFACTHYPLVEDVFKKI 191
>gi|220906704|ref|YP_002482015.1| glutamate racemase [Cyanothece sp. PCC 7425]
gi|219863315|gb|ACL43654.1| glutamate racemase [Cyanothece sp. PCC 7425]
Length = 295
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 20/270 (7%)
Query: 7 PCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALK 61
P + L Q SI +FDSG+GGL VL+ ++ +P+ F+Y AD PYGN E
Sbjct: 15 PANQSLSQQASIGVFDSGVGGLTVLRVLQQHLPQESFLYFADTAHLPYGNRCQAEIVTFA 74
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
++++ ++ K + ++ACNT+ L D +R+ F ++ LG + P + A +
Sbjct: 75 RQILTWMTEQGVK----MVIVACNTSSALALDIVRTEF-NLPILGLILPGAR--TAVQRG 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I I++T AT+ I Q + +S +E+ D E+
Sbjct: 128 KRIGIIATAATVASECYPQAILEANPQLQVWQMSCPEFVPLIEQNRIN-----DPYTLEV 182
Query: 181 EGCFIEKE-GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+++ R D ++ CTHYP + V R++ P V +D + S+ A L +
Sbjct: 183 ARTYLQPLIESRIDTLIYGCTHYPHLESVIRKVLPRSVQRIDPARSVVTAAARELELLGL 242
Query: 240 H-QTRVFDDHALFLSGKPDIAMRRLMQGFG 268
Q+R F SG P+ R Q G
Sbjct: 243 RKQSRQTSSTRFFASGCPEQFARVSSQWLG 272
>gi|315648539|ref|ZP_07901638.1| glutamate racemase [Paenibacillus vortex V453]
gi|315276233|gb|EFU39579.1| glutamate racemase [Paenibacillus vortex V453]
Length = 268
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 115/264 (43%), Gaps = 38/264 (14%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-- 69
+Q +I I DSG+GGL V +++ +P IY D PYG ++ LF+
Sbjct: 1 MQQAIAILDSGVGGLTVAKEVMRQLPREKIIYFGDTARAPYGPRTPEEVR-----LFTEQ 55
Query: 70 --DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
D L +Y P + VIACNTA D + S S+ +G + P + A + T++G + ++
Sbjct: 56 IVDYLIQYDPKMIVIACNTATAAALDYISSKV-SVPVIGVIHPGARAAISATKTGNVGVI 114
Query: 127 STPATL-RRTYTSNL--IHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIE 181
T T+ YT+ L + YV V+ AC + + E + + E
Sbjct: 115 GTTGTIGSGAYTAALKQLSPYV---------------EVQSQACPKLVPLVEHGLFRSKE 159
Query: 182 GCFIEKEGKR------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL- 234
+ +E R D ++L CTHYP + + + + V + ++D AR +L
Sbjct: 160 SLQVVQESLRGIKDTSIDCLILGCTHYPFLRNTIQTVMGPAVKLISSADETAREVSTILY 219
Query: 235 PRINTHQTRVFDDHALFLSGKPDI 258
+ + H F +G P I
Sbjct: 220 DKGQLASSEESPVHQFFCTGDPVI 243
>gi|229158101|ref|ZP_04286171.1| Glutamate racemase [Bacillus cereus ATCC 4342]
gi|229198612|ref|ZP_04325314.1| Glutamate racemase [Bacillus cereus m1293]
gi|228584894|gb|EEK43010.1| Glutamate racemase [Bacillus cereus m1293]
gi|228625420|gb|EEK82177.1| Glutamate racemase [Bacillus cereus ATCC 4342]
Length = 274
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + +
Sbjct: 179 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 238 -SDHLFLTTGK 247
>gi|237719665|ref|ZP_04550146.1| glutamate racemase [Bacteroides sp. 2_2_4]
gi|298482436|ref|ZP_07000622.1| glutamate racemase [Bacteroides sp. D22]
gi|229450934|gb|EEO56725.1| glutamate racemase [Bacteroides sp. 2_2_4]
gi|298271415|gb|EFI12990.1| glutamate racemase [Bacteroides sp. D22]
Length = 280
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 23/234 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-- 187
T++ IH + + + + S VE +E + E FI K
Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVE---------NNESQDEGADYFIRKYI 181
Query: 188 -----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ + D ++L CTH+P+++ RQ P + + + +A + L R
Sbjct: 182 NQLLSKDPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKR 235
>gi|295088107|emb|CBK69630.1| glutamate racemase [Bacteroides xylanisolvens XB1A]
Length = 280
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 23/234 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-- 187
T++ IH + + + + S VE +E + E FI K
Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVE---------NNESQDEGADYFIRKYI 181
Query: 188 -----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ + D ++L CTH+P+++ RQ P + + + +A + L R
Sbjct: 182 NQLLSKDPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKR 235
>gi|157693253|ref|YP_001487715.1| glutamate racemase [Bacillus pumilus SAFR-032]
gi|167017314|sp|A8FFY8|MURI_BACP2 RecName: Full=Glutamate racemase
gi|157682011|gb|ABV63155.1| glutamate racemase [Bacillus pumilus SAFR-032]
Length = 272
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 11/248 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L I + DSG+GGL V +++ +P+ IYV D PYG ++ + + + +
Sbjct: 2 LDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYVGDTKRCPYGPRKEEEVLQYTWEMAHYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + + VIACNTA + DE+++T + +G + P + A T + I ++ T
Sbjct: 62 LRHHHIKMLVIACNTATAIALDEIKATL-DIPVIGVIQPGARTAIKVTNNQQIGVIGTAN 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + + ++ +L VE + ++ +K +E +++ G
Sbjct: 121 TIKSEAYKEALLSLKAGLAVQSLACPLLVPFVESGTFLDQTADEVVKDSLEP--MKETG- 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDD 247
D ++L CTHYP++ ++ V + + D AR A +L +NT Q
Sbjct: 178 -IDTLILGCTHYPILKESIQRFMGSDVSIISSGDETAREASTILSYKGLLNTSQEAPV-- 234
Query: 248 HALFLSGK 255
H + +G+
Sbjct: 235 HTFYTTGQ 242
>gi|42783635|ref|NP_980882.1| glutamate racemase [Bacillus cereus ATCC 10987]
gi|206975961|ref|ZP_03236871.1| glutamate racemase [Bacillus cereus H3081.97]
gi|217961978|ref|YP_002340548.1| glutamate racemase [Bacillus cereus AH187]
gi|222097946|ref|YP_002532003.1| glutamate racemase [Bacillus cereus Q1]
gi|229141225|ref|ZP_04269764.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
gi|47606713|sp|O31332|MURI_BACC1 RecName: Full=Glutamate racemase
gi|42739564|gb|AAS43490.1| glutamate racemase [Bacillus cereus ATCC 10987]
gi|206745713|gb|EDZ57110.1| glutamate racemase [Bacillus cereus H3081.97]
gi|217068220|gb|ACJ82470.1| glutamate racemase [Bacillus cereus AH187]
gi|221242004|gb|ACM14714.1| glutamate racemase [Bacillus cereus Q1]
gi|228642266|gb|EEK98558.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
gi|324328386|gb|ADY23646.1| glutamate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 269
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + +
Sbjct: 174 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 233 -SDHLFLTTGK 242
>gi|304570642|ref|YP_832062.2| glutamate racemase [Arthrobacter sp. FB24]
Length = 351
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +YV D PYG ++ + + +++D
Sbjct: 45 IGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDELVDSG 104
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L+ IACN+A + + R + + + + PA+++A A T+SG + ++ T AT
Sbjct: 105 VKLLT-IACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVAATRSGRVGVIGTSAT 163
Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189
+ R Y + HI V+ S VE GI + + E ++E
Sbjct: 164 IGSRAYEDTF--AAAPDLHITSVACPAFVSYVE---AGITTGPELLAVARE--YLEPLRT 216
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYPL+ V + V + +++ A+
Sbjct: 217 AGVDTVVLGCTHYPLLTGVISYVMGEDVTLVSSAEETAK 255
>gi|30264552|ref|NP_846929.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47530017|ref|YP_021366.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187374|ref|YP_030626.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|49478653|ref|YP_038536.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|65321850|ref|ZP_00394809.1| COG0796: Glutamate racemase [Bacillus anthracis str. A2012]
gi|165871456|ref|ZP_02216103.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167635587|ref|ZP_02393899.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|167641657|ref|ZP_02399902.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|170688300|ref|ZP_02879510.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|177653155|ref|ZP_02935442.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190567038|ref|ZP_03019954.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|196034413|ref|ZP_03101822.1| glutamate racemase [Bacillus cereus W]
gi|196039175|ref|ZP_03106481.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|196044858|ref|ZP_03112092.1| glutamate racemase [Bacillus cereus 03BB108]
gi|218905685|ref|YP_002453519.1| glutamate racemase [Bacillus cereus AH820]
gi|225866466|ref|YP_002751844.1| glutamate racemase [Bacillus cereus 03BB102]
gi|227817263|ref|YP_002817272.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|228929530|ref|ZP_04092549.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229602085|ref|YP_002868766.1| glutamate racemase [Bacillus anthracis str. A0248]
gi|254687028|ref|ZP_05150886.1| glutamate racemase [Bacillus anthracis str. CNEVA-9066]
gi|254724590|ref|ZP_05186373.1| glutamate racemase [Bacillus anthracis str. A1055]
gi|254736586|ref|ZP_05194292.1| glutamate racemase [Bacillus anthracis str. Western North America
USA6153]
gi|254741624|ref|ZP_05199311.1| glutamate racemase [Bacillus anthracis str. Kruger B]
gi|254754778|ref|ZP_05206813.1| glutamate racemase [Bacillus anthracis str. Vollum]
gi|254757610|ref|ZP_05209637.1| glutamate racemase [Bacillus anthracis str. Australia 94]
gi|254766106|sp|C1ETT1|MURI_BACC3 RecName: Full=Glutamate racemase
gi|30259210|gb|AAP28415.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47505165|gb|AAT33841.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181301|gb|AAT56677.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|49330209|gb|AAT60855.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|164712753|gb|EDR18283.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167510364|gb|EDR85765.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|167529007|gb|EDR91762.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|170667806|gb|EDT18559.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|172081679|gb|EDT66750.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190562029|gb|EDV15998.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|195992955|gb|EDX56914.1| glutamate racemase [Bacillus cereus W]
gi|196024346|gb|EDX63019.1| glutamate racemase [Bacillus cereus 03BB108]
gi|196029802|gb|EDX68403.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|218535114|gb|ACK87512.1| glutamate racemase [Bacillus cereus AH820]
gi|225786992|gb|ACO27209.1| glutamate racemase [Bacillus cereus 03BB102]
gi|227006462|gb|ACP16205.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|228830109|gb|EEM75727.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229266493|gb|ACQ48130.1| glutamate racemase [Bacillus anthracis str. A0248]
Length = 269
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + +
Sbjct: 174 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 233 -SDHLFLTTGK 242
>gi|302206779|gb|ADL11121.1| Glutamate racemase [Corynebacterium pseudotuberculosis C231]
gi|302331332|gb|ADL21526.1| Glutamate racemase [Corynebacterium pseudotuberculosis 1002]
gi|308277024|gb|ADO26923.1| Glutamate racemase [Corynebacterium pseudotuberculosis I19]
Length = 297
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ IY+ D PYG+ +++ M + +++ +
Sbjct: 36 IGIFDSGVGGLTVARAIMEQLPQESVIYIGDTANSPYGSKPIAQVRELSMRIGDELVARG 95
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
++ VIACNTA + +LR + S+ +G + PA+++A A T++G I +L T T+
Sbjct: 96 CKMI-VIACNTATSAALRDLRERY-SIPVVGVILPAVRRAVAATRNGKIGVLGTQGTIAS 153
Query: 135 TYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
L + Y C + V I + R +I +G
Sbjct: 154 GAYQELFAASPGVEVYAQACPSFVSFVERGITSGR-------------QILGVAQGYTEG 200
Query: 187 KEGKRTDVIVLACTHYPLIVHVFR 210
+ D +VL CTHYPL+ V +
Sbjct: 201 LQSAGVDTLVLGCTHYPLLTGVIQ 224
>gi|118479648|ref|YP_896799.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam]
gi|228917121|ref|ZP_04080679.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228935802|ref|ZP_04098614.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228948207|ref|ZP_04110491.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229093579|ref|ZP_04224680.1| Glutamate racemase [Bacillus cereus Rock3-42]
gi|229124023|ref|ZP_04253215.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|229186725|ref|ZP_04313883.1| Glutamate racemase [Bacillus cereus BGSC 6E1]
gi|118418873|gb|ABK87292.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam]
gi|228596738|gb|EEK54400.1| Glutamate racemase [Bacillus cereus BGSC 6E1]
gi|228659325|gb|EEL14973.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|228689788|gb|EEL43594.1| Glutamate racemase [Bacillus cereus Rock3-42]
gi|228811565|gb|EEM57902.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228823859|gb|EEM69679.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228842539|gb|EEM87629.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 274
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + +
Sbjct: 179 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 238 -SDHLFLTTGK 247
>gi|75907689|ref|YP_321985.1| glutamate racemase [Anabaena variabilis ATCC 29413]
gi|123610062|sp|Q3MD46|MURI_ANAVT RecName: Full=Glutamate racemase
gi|75701414|gb|ABA21090.1| glutamate racemase [Anabaena variabilis ATCC 29413]
Length = 292
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 9 EKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E++ Q + I +FDSG+GGL VL+++ +P IY D PYG + ++
Sbjct: 16 EQEPQRAPIGVFDSGVGGLTVLRQIYRQLPNESVIYFGDTARLPYGIRS----QAEILTF 71
Query: 68 FSDILDKYQPV---LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123
DILD Q + V+ACNT+ L D +R + LG + P K AA Q I
Sbjct: 72 VRDILDWMQQQHVKMVVMACNTSSALALDIVREEY-DFPILGVILPGAK--AAVQQGKRI 128
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++STPAT + I + V +E+ +D E+
Sbjct: 129 GVISTPATAKSNAYRQAIWEIDPNVEVWQVGCPEFVPLIEQNRI-----QDPYTTEVARA 183
Query: 184 FIEKEGKR-TDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
++E ++ D +V CTHYPL+ V R L P V +D
Sbjct: 184 YLEPLIQQDIDTLVYGCTHYPLLAPVLRSLLPPQVKIID 222
>gi|228923236|ref|ZP_04086526.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228836442|gb|EEM81793.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 269
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 14/263 (5%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T++ + S ++ +V S+ VE G E E+ E+ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245
D ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 175 STDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 232
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
DH +GK D+ + FG
Sbjct: 233 SDHLFLTTGKIDLFKEIASKWFG 255
>gi|149241773|pdb|2GZM|A Chain A, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
gi|149241774|pdb|2GZM|B Chain B, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
gi|149241775|pdb|2GZM|C Chain C, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
gi|149241776|pdb|2GZM|D Chain D, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
Length = 267
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 61 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 119 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 172
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + +
Sbjct: 173 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 231
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 232 -SDHLFLTTGK 241
>gi|293371702|ref|ZP_06618113.1| glutamate racemase [Bacteroides ovatus SD CMC 3f]
gi|299147392|ref|ZP_07040457.1| glutamate racemase [Bacteroides sp. 3_1_23]
gi|292633399|gb|EFF51969.1| glutamate racemase [Bacteroides ovatus SD CMC 3f]
gi|298514670|gb|EFI38554.1| glutamate racemase [Bacteroides sp. 3_1_23]
Length = 280
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECVGEISKNQHIGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ IH + + + + S VE + + I+K I+ +
Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLL--SKD 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D ++L CTH+P+++ RQ P + + + +A + L R
Sbjct: 189 PQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKR 235
>gi|238021903|ref|ZP_04602329.1| hypothetical protein GCWU000324_01807 [Kingella oralis ATCC 51147]
gi|237866517|gb|EEP67559.1| hypothetical protein GCWU000324_01807 [Kingella oralis ATCC 51147]
Length = 266
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 7/211 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N I +FDSG+GGL V++ + +P + +Y D PYG + + + D L
Sbjct: 4 NPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYG-VKSRSTIETFTAQIVDFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATL 132
+ Q VIACNT + ++ +M L + A QAA A T++G I +++T T+
Sbjct: 63 QNQVKALVIACNTIAAVAHQRVQQMAGNMPVLSVIEAGAQAALATTRNGNIGVIATSTTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + I ++ +L VEE ++ +++ + +K
Sbjct: 123 NSNAYARAISARNADTRILSQAAPLLVPLVEEGWLEHEVTRLTVREYLRPLLADK----I 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
D ++L CTH+PL+ + +Q +P ++ +D+S
Sbjct: 179 DTLILGCTHFPLLKPLIKQEAPH-IELVDSS 208
>gi|303236418|ref|ZP_07323007.1| glutamate racemase [Prevotella disiens FB035-09AN]
gi|302483390|gb|EFL46396.1| glutamate racemase [Prevotella disiens FB035-09AN]
Length = 280
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 25/235 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--------WEDHALKKRLMFL 67
I +FDSG GGL +L+ +R +P+Y +IY+ D+ PYG+ + A+KK L
Sbjct: 12 IGVFDSGYGGLTILKGIREQLPQYDYIYLGDNARAPYGSRSFDIVYQFTLQAVKK----L 67
Query: 68 FSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
FS L ++ CNTA T+ K++L + P LG + P + T+S
Sbjct: 68 FS-----MGCQLVILGCNTASAKALRTIQKNDLPNIDPRRRVLGVIRPTAEIVGKLTESK 122
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I IL+TP T++ + I + + + VE + + +KK I+
Sbjct: 123 HIGILATPGTIKSESYNMEIKKLWGNVEVTGEACPLWVPIVENNEAEGEGADYFVKKRID 182
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ + D ++L CTHYP+++ +Q P + + + +A + L R
Sbjct: 183 HLL--QTDPKIDTLILGCTHYPILLPKIKQYVPEGIRIISQGEYVASSLKDYLSR 235
>gi|237651133|ref|ZP_04525385.1| glutamate racemase [Streptococcus pneumoniae CCRI 1974]
gi|237820927|ref|ZP_04596772.1| glutamate racemase [Streptococcus pneumoniae CCRI 1974M2]
Length = 264
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +++++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEKIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRKKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|312864874|ref|ZP_07725105.1| glutamate racemase [Streptococcus downei F0415]
gi|311100001|gb|EFQ58214.1| glutamate racemase [Streptococcus downei F0415]
Length = 264
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAQQIRD 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG V P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKEKL-DIPVLGVVLPGSSAAIKSTSSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I Q + ++ A VE ++ KK +
Sbjct: 111 KIGVIGTPMTVKSDIYREKIVDLAPQMQVTSLACPRFAPLVESN----QMTSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ESLAPLVGK-VDTLILGCTHYPLLRGIIQNVMGPSVKLIDSGAETIRDVSVLLNYFQLNR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|52842520|ref|YP_096319.1| glutamate racemase [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|52629631|gb|AAU28372.1| glutamate racemase [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 288
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 8/228 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + ++++
Sbjct: 24 AIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMAKILVER 83
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA T L+S + L P A + T++ I++L+T T+
Sbjct: 84 RIKAL-VIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLATETTIA 142
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+LI + + + + +L + EE + + +K ++ E D
Sbjct: 143 SRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE------D 196
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++L CTH+P+ + L P V +D++ + A LL N H
Sbjct: 197 AVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNLHN 244
>gi|170708321|ref|ZP_02898765.1| glutamate racemase [Bacillus anthracis str. A0389]
gi|170126696|gb|EDS95579.1| glutamate racemase [Bacillus anthracis str. A0389]
Length = 269
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGDFESEMAYEVVRETLQPL------ 173
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + +
Sbjct: 174 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 233 -SDHLFLTTGK 242
>gi|260584033|ref|ZP_05851781.1| glutamate racemase [Granulicatella elegans ATCC 700633]
gi|260158659|gb|EEW93727.1| glutamate racemase [Granulicatella elegans ATCC 700633]
Length = 480
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 13/227 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I DSG+GGL VL++ +P I++ D PYGN ++K + +
Sbjct: 4 MSKAIGFIDSGVGGLTVLKEALKQLPHESMIFLGDSARCPYGNRTVEEIRKFTKEMVQFL 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFL--GAVPAIKQAAAYTQSGLISILS 127
L K ++ VIACNTA +I +EL+ T P + + G++ AIKQ T+S I++L
Sbjct: 64 LKKDVKMI-VIACNTATAVILEELQETLDIPVVGVIQPGSLAAIKQ----TKSQKIAVLG 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ I Q + + VE I + + + ++
Sbjct: 119 THATIQSDVYRKTIQKKNHQLMVTSLECPKFVPLVESNQTDSPIAKKVVAQTLQPLM--- 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
GK D ++L CTHYPL+ + + V +D+ LL
Sbjct: 176 -GKEFDTLILGCTHYPLLKQRIQAVVGPQVTLIDSGAETVSTVSALL 221
>gi|332883073|gb|EGK03357.1| glutamate racemase [Dysgonomonas mossii DSM 22836]
Length = 275
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 37/241 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG GGL +L +++ LMPEY + Y+ D+ PYG + K+ + LF
Sbjct: 7 IGVFDSGYGGLTILSEIQALMPEYDYCYLGDNSRAPYGARSFEVVYEFTKQAVTALFDMG 66
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
+ L ++ACNTA T+ + +L + P LG + P + T+S + +
Sbjct: 67 CN-----LVILACNTASAKALRTIQQKDLPNMNPDKRVLGIIRPTAEIIGQITRSRHVGV 121
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEG 182
L T T++ SQ + ++ + +V AC + ++ +E + E
Sbjct: 122 LGTVGTIQ------------SQSYPIEINKLFPDIKVTGEACPMWVPLVENNEYESEGAD 169
Query: 183 CFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
F++K + D+++L CTHYPL++H +++ P V L + IA + L
Sbjct: 170 YFVKKNLDNILAKDPDIDILILGCTHYPLLLHKIKKILPKEVTALPQGEYIAHSLKDYLR 229
Query: 236 R 236
R
Sbjct: 230 R 230
>gi|225850547|ref|YP_002730781.1| glutamate racemase [Persephonella marina EX-H1]
gi|254766121|sp|C0QQ35|MURI_PERMH RecName: Full=Glutamate racemase
gi|225646550|gb|ACO04736.1| glutamate racemase [Persephonella marina EX-H1]
Length = 259
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 17/218 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM----FLFSD 70
SI IFDSG+GGL V +++ P Y+ D PYGN + + + +L+S
Sbjct: 2 SIGIFDSGVGGLTVFREIDREFPFADIYYLGDTARVPYGNKSKETIIRYSLECANYLYSF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+D ++ACNTA + + LR +F + +G + P ++ A T++G I ++ T
Sbjct: 62 GIDAL-----IVACNTASSYAIEALRESF-DIPVIGVIKPGVELAVKTTKNGRIGVIGTQ 115
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ I ++ + VEE KI E +K+ ++
Sbjct: 116 ATIKSGSYRTEIEKK-GDFTVYQKPCPLFVPLVEEGLIDHKITELTVKEYLDDIV----S 170
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
K D ++L CTHYPL+ V +++ P ++ +D+S + A
Sbjct: 171 KGIDTLILGCTHYPLLKDVIKKIYPH-LNIIDSSKATA 207
>gi|146319360|ref|YP_001199072.1| glutamate racemase [Streptococcus suis 05ZYH33]
gi|146321565|ref|YP_001201276.1| glutamate racemase [Streptococcus suis 98HAH33]
gi|253752389|ref|YP_003025530.1| glutamate racemase [Streptococcus suis SC84]
gi|253754215|ref|YP_003027356.1| glutamate racemase [Streptococcus suis P1/7]
gi|253756149|ref|YP_003029289.1| glutamate racemase [Streptococcus suis BM407]
gi|166231062|sp|A4W3D7|MURI_STRS2 RecName: Full=Glutamate racemase
gi|166231064|sp|A4VX33|MURI_STRSY RecName: Full=Glutamate racemase
gi|145690166|gb|ABP90672.1| Glutamate racemase [Streptococcus suis 05ZYH33]
gi|145692371|gb|ABP92876.1| Glutamate racemase [Streptococcus suis 98HAH33]
gi|251816678|emb|CAZ52319.1| glutamate racemase [Streptococcus suis SC84]
gi|251818613|emb|CAZ56447.1| glutamate racemase [Streptococcus suis BM407]
gi|251820461|emb|CAR47171.1| glutamate racemase [Streptococcus suis P1/7]
gi|292558992|gb|ADE31993.1| Glutamate racemase [Streptococcus suis GZ1]
Length = 264
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 18/257 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V +++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ V ACNTA ++ +E++ + LG + P A TQ+G
Sbjct: 53 YTWQLVNFLLTKNVKMI-VFACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T++ I + + + ++ A VE + + + K++
Sbjct: 111 KVGVLGTAMTIQSDIYREKIQALSPETQVDSLACPKFAPLVESNS-----HQSSLAKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + D +VL CTHYPL+ + + V +D+ AR LL ++
Sbjct: 166 YETLRPLVGQVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225
Query: 242 TRVFDD--HALFLSGKP 256
+R D H + + P
Sbjct: 226 SRTEKDIQHRFYTTASP 242
>gi|257463297|ref|ZP_05627695.1| glutamate racemase [Fusobacterium sp. D12]
Length = 274
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 111/227 (48%), Gaps = 9/227 (3%)
Query: 6 YPCEKKLQNSIL---IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
Y +K+ + I+ +FDSGIGGL VL + ++P+ +FIY AD PYG + K
Sbjct: 3 YNVKKRKKGIIMKIGVFDSGIGGLSVLHQAMQMLPQENFIYYADIDHVPYGTKTKEEIIK 62
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
++ K + VIACNTA + ELR + ++ +G PA+K+A +
Sbjct: 63 YSSEAVEFLVQKGVKAI-VIACNTATSAAIQELREKY-TLPIIGMEPAVKKAIDFHPKKR 120
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++TP T++ NLI ++ HLV ++ L V +A +E+E+ + +
Sbjct: 121 VLVIATPMTIQGEKLHNLIEKVDTE---HLVDAVALPKLV-TFAEEENFEEEEVTEYLRE 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ +VL CTH+ +++ P V +LD ++ ++
Sbjct: 177 ALKHFNLENYSSVVLGCTHFNYFKDSLKKMLPKGVHFLDGNEGTIKK 223
>gi|220913060|ref|YP_002488369.1| glutamate racemase [Arthrobacter chlorophenolicus A6]
gi|219859938|gb|ACL40280.1| glutamate racemase [Arthrobacter chlorophenolicus A6]
Length = 360
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 12/229 (5%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ P I +FDSG+GGL V + + +P +YV D PYG ++
Sbjct: 34 DLPAAALETRPIGVFDSGVGGLTVARSIIDQLPNESILYVGDTAHGPYGPLPIAEVRANA 93
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQS 120
+ + +++D +L+ IACN+A + + R + + + + PA+++A A T+S
Sbjct: 94 LGVMDELVDSGVKLLT-IACNSASAAVLRDARERYTAKYGIPVIEVIQPAVRRAVAATRS 152
Query: 121 GLISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
G + ++ T AT+ R Y + HI V+ S VE GI E+
Sbjct: 153 GRVGVIGTSATVGSRAYEDTF--AAAPDLHITSVACPEFVSYVE---AGITTGP-ELLAV 206
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
E + D +VL CTHYPL+ V + V + +++ A+
Sbjct: 207 AEEYLAPLKASGVDTVVLGCTHYPLLTGVISYVMGADVTLVSSAEETAK 255
>gi|83312625|ref|YP_422889.1| glutamate racemase [Magnetospirillum magneticum AMB-1]
gi|82947466|dbj|BAE52330.1| Glutamate racemase [Magnetospirillum magneticum AMB-1]
Length = 284
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 4/211 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL V +R MP+ +Y+ D PYG + + + +++K
Sbjct: 22 VGIFDSGVGGLTVAAAIRRAMPDERLLYLGDVARQPYGTKSPRTVTRYAVQAAEFLVEKG 81
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATLRR 134
L V+ACNTA + + + FP + LG V A AA + G I + +T T R
Sbjct: 82 IKAL-VVACNTASAVALEAIAERFPGLPVLGVVEAGADGAARASARGRIVVAATEGTCRS 140
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I + V + + EE I D + + G + + D
Sbjct: 141 EAYERAIARRRDGALVRCVPCPLFVALAEEGLTDGPIV-DSVARHYLGSLFDGT-EPGDC 198
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
+VL CTH+PL+ +L+ V +D +++
Sbjct: 199 LVLGCTHFPLLAPALSRLAGPEVTLVDCAEA 229
>gi|303238403|ref|ZP_07324938.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
gi|302594107|gb|EFL63820.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
Length = 268
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 19/229 (8%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL VL+++ L+P+ +Y D PYG + K
Sbjct: 1 MDNRP--------IGVFDSGIGGLTVLKEINRLLPQESVVYFGDSGRAPYGTKSKETVIK 52
Query: 63 RLMFLFSDI--LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ F DI L + VIACNTA D ++ +F P AA T++
Sbjct: 53 ---YTFQDIRFLQNQDIKMIVIACNTASACSLDRVKHSFDFPIVEVVQPGSAAAAKETRN 109
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ ++ TPAT+ I S I + VEE E+EI +I
Sbjct: 110 NRVGVIGTPATISSGVYEKAITRINSSIEIFSKPCPMFVPLVEEGWW-----ENEIAFKI 164
Query: 181 -EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
E + + D +VL CTHYPL+ + +++ V ++++ +A+
Sbjct: 165 AEEYLLPLKELDIDTLVLGCTHYPLLQNTIQKVMGDDVKLVNSALEVAK 213
>gi|54298200|ref|YP_124569.1| hypothetical protein lpp2258 [Legionella pneumophila str. Paris]
gi|53751985|emb|CAH13411.1| hypothetical protein lpp2258 [Legionella pneumophila str. Paris]
gi|307611149|emb|CBX00793.1| hypothetical protein LPW_24971 [Legionella pneumophila 130b]
Length = 279
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 8/228 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + ++++
Sbjct: 15 AIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMAKILVER 74
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA T L+S + L P A + T++ I++L+T T+
Sbjct: 75 RIKAL-VIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLATETTIA 133
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+LI + + + + +L + EE + + +K ++ E D
Sbjct: 134 SRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE------D 187
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++L CTH+P+ + L P V +D++ + A LL N H
Sbjct: 188 AVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNLHN 235
>gi|317060877|ref|ZP_07925362.1| glutamate racemase [Fusobacterium sp. D12]
gi|313686553|gb|EFS23388.1| glutamate racemase [Fusobacterium sp. D12]
Length = 261
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 6/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL + ++P+ +FIY AD PYG + K ++ K
Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADIDHVPYGTKTKEEIIKYSSEAVEFLVQKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA + ELR + ++ +G PA+K+A + + +++TP T++
Sbjct: 63 VKAI-VIACNTATSAAIQELREKY-TLPIIGMEPAVKKAIDFHPKKRVLVIATPMTIQGE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NLI ++ HLV ++ L V +A +E+E+ + + + +
Sbjct: 121 KLHNLIEKVDTE---HLVDAVALPKLV-TFAEEENFEEEEVTEYLREALKHFNLENYSSV 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VL CTH+ +++ P V +LD ++ ++
Sbjct: 177 VLGCTHFNYFKDSLKKMLPKGVHFLDGNEGTIKK 210
>gi|294811101|ref|ZP_06769744.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064]
gi|294323700|gb|EFG05343.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064]
Length = 256
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 108/257 (42%), Gaps = 16/257 (6%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L +R L P+ + D G P+G + +R + + ++ P
Sbjct: 1 MDSGIGLLAAAAAVRGLRPDADLVLSQDPDGMPWGPRTPEGVTERALAVARAAA-EHAPD 59
Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++ACNTA LR+ P++ +G VPAIK AA G I+I +TPAT Y
Sbjct: 60 ALIVACNTATVHALPALRAALEPAIPVIGTVPAIKPAA--VAGGPIAIWATPATTGSPYQ 117
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+LI + + V LA V+ +DE + + T +VL
Sbjct: 118 RDLIGRFAGAVDVAEVPCPGLADAVDH-------ADDEAIDRAVAAAAARTPRDTRAVVL 170
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK-- 255
CTHY L+ R PV ++ ++A +A + + LSG+
Sbjct: 171 GCTHYELVAERIRDAIGTPVALHGSAGAVAAQALRRIGAAPAPGATASGTLTVLLSGRAS 230
Query: 256 --PDIAMRRLMQGFGLK 270
PD A+ R +G GL+
Sbjct: 231 ALPDRAL-RYAEGRGLQ 246
>gi|260890743|ref|ZP_05902006.1| glutamate racemase [Leptotrichia hofstadii F0254]
gi|260859621|gb|EEX74121.1| glutamate racemase [Leptotrichia hofstadii F0254]
Length = 261
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 9/223 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSGIGGL VL+++R ++P Y D PYG + + + +L+K
Sbjct: 2 SIGVFDSGIGGLTVLKEIRKVLPNEKIYYFGDTARVPYGEKTKELIIRYSKEIVEFLLEK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA L EL+ F + +G + A + A T+S I ++ T AT++
Sbjct: 62 DVSAI-VVACNTATALALKELKEIF-KIPIIGVIEAGARTAINTTKSNEIGVIGTKATIK 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + + + VEE K+ IK +++ D
Sbjct: 120 SEKYIEEIKLFNPKVKVFQKACPLFVPAVEEGILSGKLVNQIIK-----TYLDDFEGEID 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++L CTHYPL+ ++ P + +D + A + +L +
Sbjct: 175 TLILGCTHYPLLKDAISKIYP-DIKIVDPAKETALDLKSILQK 216
>gi|157151279|ref|YP_001450953.1| glutamate racemase [Streptococcus gordonii str. Challis substr.
CH1]
gi|189030375|sp|A8AYU3|MURI_STRGC RecName: Full=Glutamate racemase
gi|157076073|gb|ABV10756.1| glutamate racemase [Streptococcus gordonii str. Challis substr.
CH1]
Length = 264
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRD 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKSTHSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ TS++ + + S + + ++ KK +
Sbjct: 111 KIGVIGTPMTV----TSDIYRKKIEALSPEMEVSSLACPKFVPLVESNELTSSVTKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLLPLAGK-VDTLVLGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|56477960|ref|YP_159549.1| glutamate racemase [Aromatoleum aromaticum EbN1]
gi|56314003|emb|CAI08648.1| Glutamate racemase (EC 5.1.1.3), gene: MURI OR GLR OR NMA2026 OR
NMB0458 [Aromatoleum aromaticum EbN1]
Length = 267
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 6/208 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL V++ + +P H +Y D PYG + A + +D L +
Sbjct: 7 IGVFDSGIGGLTVVRALMERLPLEHIVYFGDTARVPYG-VKSVATIRHFTEQITDFLLQQ 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRR 134
+ ++ACNT + + +R S+ L + A QAA A ++S I ++ TP T+
Sbjct: 66 DVKMLIVACNTMAAVAAETVRQRAGSIPVLDVIEAGAQAAVAQSRSRGIGVIGTPTTVNS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ IH+ S ++ + + VEE + ++ ++ E+ D
Sbjct: 126 NAYARRIHALDSGARVYSQACPLFVPLVEEGWLDHPVTRLTAQEYLKPVLAEE----VDS 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+VL CTHYPL+ + R + V +D+
Sbjct: 182 LVLGCTHYPLLKPLLRDVVGPGVRLVDS 209
>gi|160885540|ref|ZP_02066543.1| hypothetical protein BACOVA_03540 [Bacteroides ovatus ATCC 8483]
gi|156109162|gb|EDO10907.1| hypothetical protein BACOVA_03540 [Bacteroides ovatus ATCC 8483]
Length = 280
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECIGEISKNQHIGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ IH + + + + S VE + + I+K I+ +
Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLL--SKD 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D ++L CTH+P+++ RQ P + + + +A + L R
Sbjct: 189 PQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKR 235
>gi|254422538|ref|ZP_05036256.1| glutamate racemase [Synechococcus sp. PCC 7335]
gi|196190027|gb|EDX84991.1| glutamate racemase [Synechococcus sp. PCC 7335]
Length = 307
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 33/256 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I +FDSG+GGL VL++MR +P IY D PYGN K ++ +I+
Sbjct: 16 IGVFDSGVGGLTVLREMRSHLPAESIIYFGDTARVPYGNRS----KSEILRFVREIIAWM 71
Query: 74 -KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + L V+ACNT+ L+ +E+RS FP + LG V + A T I ++ST AT
Sbjct: 72 IRLEVKLIVMACNTSSALVLEEVRSEFP-IPILGIVLPGARGAVKT-GKRIGVVSTEATA 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKE-----DEIKKEIEGCFI 185
+ S ++ V + RV + C + + E D + ++
Sbjct: 130 K------------SDAYLQAVQEIDSTIRVWQVGCPEFVPLIESGRSYDPYTLTVAKRYL 177
Query: 186 EKE-GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
E D +V CTHYP + VF+Q+ P + +D + ++ A L + +
Sbjct: 178 EPLIAAGIDTLVYGCTHYPHLAPVFKQILPTRIKLVDPAKHLSVAAAQELEILGLCNSNA 237
Query: 245 FDDHA----LFLSGKP 256
+ A ++SG P
Sbjct: 238 VETGATPTEFYVSGDP 253
>gi|257058497|ref|YP_003136385.1| glutamate racemase [Cyanothece sp. PCC 8802]
gi|256588663|gb|ACU99549.1| glutamate racemase [Cyanothece sp. PCC 8802]
Length = 281
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 26/232 (11%)
Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMF 66
+ +QNS I +FDSG+GGL VL+++ +P+ +Y AD PYGN + + R +
Sbjct: 2 RSVQNSPIGVFDSGVGGLTVLRELYRQLPQESMLYFADTARLPYGNRSGAEILQYVREIL 61
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
++ + + + ++ACNT+ L D +RS F + LG + P + AA Q I +
Sbjct: 62 VW---MSQQNVKMVIMACNTSSALALDIVRSEF-NFPILGVILPGAR--AAVKQGQRIGV 115
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRVEEYACGIKIKEDEIKKEI 180
+STPAT + I + + V +I A+R+ D K++
Sbjct: 116 ISTPATAKSNAYRQAIQEINPKAQVWQVGCPEFVPLIEANRI----------HDPYTKQV 165
Query: 181 EGCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
++ + D +V CTHY + +F+++ P V+ +D ++ + A+
Sbjct: 166 AWKYLAPLLAQNIDTLVYGCTHYRHLSPIFQEIIPPTVNLIDPANFVVAAAK 217
>gi|108758013|ref|YP_633888.1| glutamate racemase [Myxococcus xanthus DK 1622]
gi|27804816|gb|AAO22860.1| glutamate racemase [Myxococcus xanthus]
gi|108461893|gb|ABF87078.1| glutamate racemase [Myxococcus xanthus DK 1622]
Length = 271
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 15/251 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+ + +P +Y+ D PYG + + + +L
Sbjct: 6 HSPIGVFDSGVGGLTVLKALMARLPHESTVYLGDTARVPYGTKSGEVVTRYSLKNAEFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ +L V+ACNTA + L + P +P + A A TQ G + I+ TP T+
Sbjct: 66 ERGIKLL-VVACNTASAVALPALEAALPVPVVGVILPGARAALARTQGGGVGIIGTPGTI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACG---IKIKEDEIKKEIEGCFIEKE 188
R + S + + + EE + G + + D + + ++
Sbjct: 125 RSGAYQRALESADPRVRAKARACPLFVPLAEEGWTTGDVPLLVARDYLAE------FTRD 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFD 246
G D +VL CTHYPL+ V ++ V +D++++ A LL + +R
Sbjct: 179 G--VDTLVLGCTHYPLLKGVIAEVVGPQVALVDSAEATADAVAALLSERDGLAPASRGTP 236
Query: 247 DHALFLSGKPD 257
+HA +++ P+
Sbjct: 237 EHAYYVTDVPE 247
>gi|262283242|ref|ZP_06061009.1| glutamate racemase [Streptococcus sp. 2_1_36FAA]
gi|262261494|gb|EEY80193.1| glutamate racemase [Streptococcus sp. 2_1_36FAA]
Length = 264
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRD 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKSTHSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ TS++ + + S + + ++ KK +
Sbjct: 111 KIGVIGTPMTV----TSDIYRKKIEALSPEMEVSSLACPKFVPLVESNELTSSVTKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLLPLAGK-VDTLVLGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|260172140|ref|ZP_05758552.1| glutamate racemase [Bacteroides sp. D2]
gi|315920449|ref|ZP_07916689.1| glutamate racemase [Bacteroides sp. D2]
gi|313694324|gb|EFS31159.1| glutamate racemase [Bacteroides sp. D2]
Length = 280
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 12 IGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P+ LG + P ++ +++ I +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECVEEISKNQHIGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ IH + + + + S VE + + I+K I+ +
Sbjct: 131 GTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLL--SKD 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D ++L CTH+P+++ RQ P + + + +A + L R
Sbjct: 189 PQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKR 235
>gi|24380092|ref|NP_722047.1| glutamate racemase [Streptococcus mutans UA159]
gi|29839525|sp|Q8DSQ5|MURI_STRMU RecName: Full=Glutamate racemase
gi|24378087|gb|AAN59353.1|AE015000_11 putative glutamate racemase [Streptococcus mutans UA159]
Length = 264
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 105/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG +K
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKT 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ V ACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWELVNFLLTKKVKMI-VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I I+ TP T++ I Q + ++ VE K+ KK +
Sbjct: 111 QIGIIGTPMTIKSNIYEQKIRDLSPQMKVRSLACPKFVPIVESN----KMNSSVAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V+ +D+ R LL + ++
Sbjct: 167 ESLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPDVELIDSGAECVRDISVLLNYFDLNR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|149278811|ref|ZP_01884946.1| glutamate racemase [Pedobacter sp. BAL39]
gi|149230430|gb|EDM35814.1| glutamate racemase [Pedobacter sp. BAL39]
Length = 276
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ SI IFDSG GGL V + + +P+Y++IY+ D+ PYG+ + + +
Sbjct: 2 NISQSIGIFDSGFGGLTVFKSIAQKLPQYNYIYLGDNSRAPYGDRSFETVYRYTLECVEW 61
Query: 71 ILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124
+ + P L ++ACNTA ++ + L +P LG + P + Y+ S I
Sbjct: 62 LFGQGCP-LVILACNTASAKALRSIQQKVLPFKYPDRRVLGVIRPTAEVVGNYSNSRTIG 120
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGC 183
++ T T++ S+ ++ V+ +V + +C + + E + I EG
Sbjct: 121 VMGTRGTVK------------SESYLIEVAKFFPEIKVLQQSCPLWVPLIENNEHIHEGA 168
Query: 184 --FIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
F++K + D I+LACTHYPL++ R L P V L + +A L
Sbjct: 169 DYFLKKYLGQLLAKDDAIDCILLACTHYPLLIPKLRALLPEKVALLGQGEIVADSLVDYL 228
Query: 235 PRINTHQTRVFDDHAL--FLSGKPDI 258
R + R+ D + F SG +
Sbjct: 229 ERHPEMKDRLARDREMRFFTSGDTSV 254
>gi|38234423|ref|NP_940190.1| glutamate racemase [Corynebacterium diphtheriae NCTC 13129]
gi|81564603|sp|Q6NFN4|MURI_CORDI RecName: Full=Glutamate racemase
gi|38200686|emb|CAE50382.1| glutamate racemase [Corynebacterium diphtheriae]
Length = 265
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 8/196 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P IY+ D PYG + A + L + L +
Sbjct: 6 IGIFDSGVGGLTVARVIMEQLPNESVIYIGDTANSPYG-PKPIAQVRELSLAIGEELVRR 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + +LR F + LG + PA+++A + T++G I ++ T T++
Sbjct: 65 GCKMIVIACNTATSAALRDLRERF-DVPVLGVILPAVRRAVSTTRNGKIGVIGTEGTIKS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L + S +H + S VE GI +I +G + D
Sbjct: 124 GAYQELFAASPS-VEVHAQACPSFVSFVER---GIT-SGRQILGVAQGYVEPLQAAGVDT 178
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHYPL+ V +
Sbjct: 179 LVLGCTHYPLLTGVIQ 194
>gi|299137116|ref|ZP_07030299.1| glutamate racemase [Acidobacterium sp. MP5ACTX8]
gi|298601631|gb|EFI57786.1| glutamate racemase [Acidobacterium sp. MP5ACTX8]
Length = 267
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 26/200 (13%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+ + L+P H+IY+ D PYG+ + R + L++
Sbjct: 6 IGVFDSGFGGLTVLRALLPLVPGAHYIYLGDTARLPYGSKSQTTI-ARYAVESARFLEER 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNTA L E+R+ S+ +G + P ++ A S + +L+T AT++
Sbjct: 65 GSDLLVIACNTATALALPEIRAAV-SVPVVGVIEPVVRAANLQHPSAEVLVLATTATVQS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------EDEIKKEIEGCFIEK 187
H+Y+ C L R E AC + + + + +++ ++E+
Sbjct: 124 -------HAYLQHCE-------ALGLRATEKACPLLVPLVEEGWIDHPVTRDVLRIYLEE 169
Query: 188 EGKRTD--VIVLACTHYPLI 205
++L CTHYPL+
Sbjct: 170 ALATCSPKAVLLGCTHYPLL 189
>gi|238764511|ref|ZP_04625459.1| Glutamate racemase [Yersinia kristensenii ATCC 33638]
gi|238697323|gb|EEP90092.1| Glutamate racemase [Yersinia kristensenii ATCC 33638]
Length = 186
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 6/177 (3%)
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R FP +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S
Sbjct: 9 RFDFP---VVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTLDLIERFATDCKIELLGS 65
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + + +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 66 SELVELAETKLHGGAVPPEALKKILHPWLAMREPP--DTIVLGCTHFPLLSDELAQVLPE 123
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+D+ +IARR L+ + ++ A ++ D A+ ++QG+G +
Sbjct: 124 GTRMVDSGAAIARRTAWLISSQENVVSSQAENIAYCMALNTDTDALLPVLQGYGFPT 180
>gi|329964674|ref|ZP_08301728.1| glutamate racemase [Bacteroides fluxus YIT 12057]
gi|328525074|gb|EGF52126.1| glutamate racemase [Bacteroides fluxus YIT 12057]
Length = 281
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 29/237 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILSKIRETLPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVTKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P LG + P ++ TQS I +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQINDLPRLDPMRRVLGVIRPTVECIGNITQSRHIGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186
T++ SQ + V + +V AC + ++ +E + + FI
Sbjct: 131 GTIK------------SQSYPLEVHKLFPDIKVSGEACPLWVPLVENNEARGDGTDYFIR 178
Query: 187 K-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
K + + D ++L CTHYP+++ RQ P + + + +A+ + L R
Sbjct: 179 KYIDELLAKDNQIDTVILGCTHYPILLPKIRQYMPSGITTVAQGEFVAKSLKDYLQR 235
>gi|296111814|ref|YP_003622196.1| glutamate racemase [Leuconostoc kimchii IMSNU 11154]
gi|295833346|gb|ADG41227.1| glutamate racemase [Leuconostoc kimchii IMSNU 11154]
Length = 280
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 24/254 (9%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N I + DSG+GGL V++ + +P FI++ D PYG + + + + +++
Sbjct: 5 NPIGMVDSGVGGLTVIKAAQKQLPNEQFIFIGDTARMPYGPRTTDEVIAYTLQMANFLVN 64
Query: 74 KYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
+ L VIACNT A ++++D+L S+ +G + P K A T++ I +++T
Sbjct: 65 EKHIKLLVIACNTATARALSVLQDQL-----SIPVIGVIQPGAKAAQLATKNKKIGVIAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKE---DEIKKEIEGCF 184
T+ +Y Q H H S + + S+ E E+ +++ + DE +K +
Sbjct: 120 QGTVTS-------EAYDVQLH-HYNSQITVVSQAEPEFVQTVELNKYHSDEARKLVNSHL 171
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR-CLL-PRINTHQT 242
+ + D ++L CTH+PL+ + V +D+ + + CL ++T
Sbjct: 172 ATLKAAKIDTLILGCTHFPLLTPFIKSAIGENVTLIDSGQETVQVIQDCLAQSHLSTVSK 231
Query: 243 RVFDDHALFLSGKP 256
+D + +G P
Sbjct: 232 HDHNDDVYYTTGDP 245
>gi|266620112|ref|ZP_06113047.1| glutamate racemase [Clostridium hathewayi DSM 13479]
gi|288868341|gb|EFD00640.1| glutamate racemase [Clostridium hathewayi DSM 13479]
Length = 272
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
+ I +FDSG+GGL V +++ MPE +Y D PYGN + + ++ + FL
Sbjct: 5 NSPIGVFDSGVGGLTVAREIMRQMPEERIVYFGDTARVPYGNKSGNTVIRFTRQIIRFLL 64
Query: 69 SDILDKYQPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ + VIACN TA+ L E P + + A + A T++G I I+
Sbjct: 65 TQDVKAI-----VIACNTATAYALEAVEGELDIPIIGVIHA--GARTATQATKNGKIGII 117
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI- 185
T T+R + ++ + +L VEE + D + EI ++
Sbjct: 118 GTEGTIRSGVYTKVMMEMRPDIEVTGKPCPLLVPLVEE-----GLLHDSVTDEIASRYLS 172
Query: 186 EKEGKRTDVIVLACTHYPLI-VHVFRQLSP 214
E +GK D +VL CTHYPL+ V R + P
Sbjct: 173 ELKGKYIDTLVLGCTHYPLLRSTVGRLMGP 202
>gi|325690950|gb|EGD32950.1| glutamate racemase [Streptococcus sanguinis SK115]
Length = 264
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + K++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ R D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNMMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|218245461|ref|YP_002370832.1| glutamate racemase [Cyanothece sp. PCC 8801]
gi|226722982|sp|B7JWN0|MURI_CYAP8 RecName: Full=Glutamate racemase
gi|218165939|gb|ACK64676.1| glutamate racemase [Cyanothece sp. PCC 8801]
Length = 281
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 26/232 (11%)
Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMF 66
+ +QNS I +FDSG+GGL VL+++ +P+ +Y AD PYGN + + R +
Sbjct: 2 RSVQNSPIGVFDSGVGGLTVLRELYRQLPQESMLYFADTARLPYGNRSGAEILQYVREIL 61
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
++ + + + ++ACNT+ L D +RS F + LG + P + AA Q I +
Sbjct: 62 VW---MSQQNVKMVIMACNTSSALALDIVRSEF-NFPILGVILPGAR--AAVKQGQRIGV 115
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRVEEYACGIKIKEDEIKKEI 180
+STPAT + I + + V +I A+R+ D K++
Sbjct: 116 ISTPATAKSNAYRQAIQEINPKAQVWQVGCAEFVPLIEANRI----------HDPYTKQV 165
Query: 181 EGCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
++ + D +V CTHY + +F+++ P V+ +D ++ + A+
Sbjct: 166 AWKYLAPLLAQNIDTLVYGCTHYRHLSPIFQEIIPPTVNLIDPANFVVAAAK 217
>gi|291166140|gb|EFE28186.1| glutamate racemase [Filifactor alocis ATCC 35896]
Length = 257
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 20/248 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLM-FLFSD 70
+I IFDSGIGGL VL ++P +FIY AD PYG +E +M F S
Sbjct: 2 NIGIFDSGIGGLSVLHHALKIIPHANFIYYADRKNVPYGEKSVFEIQTFIDEIMNFFISK 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGL-ISILST 128
+D VIACNTA ++ E R FP +G PA+K+A YT+ I + +T
Sbjct: 62 KVDAL-----VIACNTASSVATKEYRDKFP-FPIIGMEPAVKKAVETYTEKQQRILVAAT 115
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P T++ N + +++ + + +I ++ +A + E+++ I+ +
Sbjct: 116 PITIQ----GNKLRQLLNRVDKYHQADLIALPKLVHFAELKQFDSLEVEEYIKTALNQYC 171
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
IVL CTH+ F+++ ++D ++ ++ P I ++ V
Sbjct: 172 AVDYSAIVLGCTHFNYFKPSFQRIFSKKTQFIDGNEGTIKQLLRKAPLIESYSQSV---- 227
Query: 249 ALFLSGKP 256
+ SG P
Sbjct: 228 QFYFSGIP 235
>gi|213965871|ref|ZP_03394062.1| glutamate racemase [Corynebacterium amycolatum SK46]
gi|213951449|gb|EEB62840.1| glutamate racemase [Corynebacterium amycolatum SK46]
Length = 288
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 6/195 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+ D PYG +++ + +++ +
Sbjct: 27 IGIFDSGVGGLTVARAIMDQLPHESIMYIGDTANGPYGPLRIAEVRQHAEAIADELVARG 86
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ VIACNTA + R +P +PA+++A + T++G + ++ T AT+R
Sbjct: 87 CKMI-VIACNTASAAFLRDARERYPVPVVEVILPAVRRAVSTTRNGKVGVIGTAATIRSR 145
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L + V + V VE GI +I EG + D +
Sbjct: 146 AYQDLFDA-VPGVDVSAVDCPRFVDFVER---GITSGR-QILGLAEGYLAPLQADGVDTL 200
Query: 196 VLACTHYPLIVHVFR 210
VL CTHYPL+ V +
Sbjct: 201 VLGCTHYPLLSGVIQ 215
>gi|259047138|ref|ZP_05737539.1| glutamate racemase [Granulicatella adiacens ATCC 49175]
gi|259036188|gb|EEW37443.1| glutamate racemase [Granulicatella adiacens ATCC 49175]
Length = 482
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 13/227 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I DSG+GGL VL++ +P +++ D PYG +++ + + +
Sbjct: 1 MKRPIGFIDSGVGGLTVLKEALKQLPNESMVFLGDSARCPYGTRPKEEIRQYTLEMVQFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFL--GAVPAIKQAAAYTQSGLISILS 127
L K +L VIACNTA ++ +EL+ T P + + G++ AIKQ T + I +L
Sbjct: 61 LQKNIKML-VIACNTATAVVLEELKQTLEIPVVGVIQPGSLAAIKQ----TSNDRIGVLG 115
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +H + ++ VE + +K+ +
Sbjct: 116 TNATISSKVYPKTMHDKNKNIQVFDIACPNFVPLVENNQSDTPEAWEIVKETLNPL---- 171
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
EG D ++L CTHYPL+ +++ V +D+ LL
Sbjct: 172 EGTNVDTVILGCTHYPLLRKTIQKVVGNQVSLIDSGAETVSSVSALL 218
>gi|229497077|ref|ZP_04390781.1| glutamate racemase [Porphyromonas endodontalis ATCC 35406]
gi|229316002|gb|EEN81931.1| glutamate racemase [Porphyromonas endodontalis ATCC 35406]
Length = 277
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 115/249 (46%), Gaps = 36/249 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL +L+++R LMP+Y ++Y+ D+ PYG+ + K + + +
Sbjct: 8 IGIFDSGYGGLTILREIRKLMPQYDYLYLGDNARSPYGSRSFEIVYKFTLQAVERLFEMG 67
Query: 76 QPVLSVIACNTAF-----TLIKDEL-RSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
P L ++ACNTA T+ + +L + + PS LG + P ++ T S + IL+T
Sbjct: 68 CP-LVILACNTASAKALRTIQQQDLPQMSDPSRRVLGIIRPTVEAVDTITASKHVGILAT 126
Query: 129 PATLRRTYTSNLIHSY---VSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEG 182
T+ HSY +++ H++ V E AC + ++ E
Sbjct: 127 EGTVSS-------HSYQMEIAKLFPHII--------VSEEACPMWVPLVENGEADSPGAD 171
Query: 183 CFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
++ K + K D IVLACTHYPL+ ++L + + + +A + L
Sbjct: 172 YYVRKHLDALLCKDKAIDTIVLACTHYPLLRQKIKRLITPSITVVSQGEYVASSLQDYLG 231
Query: 236 RINTHQTRV 244
R R+
Sbjct: 232 RQTEMDARL 240
>gi|212638431|ref|YP_002314951.1| glutamate racemase [Anoxybacillus flavithermus WK1]
gi|212559911|gb|ACJ32966.1| Glutamate racemase [Anoxybacillus flavithermus WK1]
Length = 278
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 12/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ +Y+ D PYG +++ + ++
Sbjct: 14 LERPIGVIDSGVGGLTVAKEIMRQLPKEQIVYLGDTARCPYGPRPREEIRQ-FTWEMTNY 72
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L Y + VIACNTA + +E+R T ++ +G V P + A T++ I ++ T
Sbjct: 73 LLGYDIKMLVIACNTATAVALEEIRHTL-NIPVIGVVHPGARTALKITKNYHIGVIGTIG 131
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S S I ++ VE + + +E K+ + + +
Sbjct: 132 TVKSGAYEQALKSINSDVKIESLACPKFVPLVESG----QFEGEEAKQIVAESLEPFKDR 187
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDD 247
D ++L CTHYPL+ + +Q V + + D AR +L + T R +
Sbjct: 188 PIDTLILGCTHYPLLSPLIQQYMGEHVKLICSGDETAREVSTILHHSGLLYTGNKR--RE 245
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
H F +G + + + FG
Sbjct: 246 HIFFTTGSKETFQQIASKWFG 266
>gi|319441880|ref|ZP_07991036.1| glutamate racemase [Corynebacterium variabile DSM 44702]
Length = 277
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + +PE IY+ D PYG+ +++ + D++
Sbjct: 7 NSPIGVFDSGVGGLTVARAIVDQLPEESMIYIGDTANSPYGDKPLAVVRELATAIADDLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D+ ++ V+ACNTA + R +P +PA+++A + T++G + ++ T AT+
Sbjct: 67 DRGCKMI-VVACNTASAAFLRDARERYPVPIIEVILPAVRRAVSVTRNGRVGVIGTHATI 125
Query: 133 RRTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L + + C + V I R +I E
Sbjct: 126 TSGAYQDLFRANPNVEVFAQDCPQFVPFVERGITTGR-------------QILGLAEAYL 172
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFR 210
+ + D +VL CTHYPL+ V +
Sbjct: 173 EPLKDEGVDTLVLGCTHYPLLTGVLQ 198
>gi|322377632|ref|ZP_08052122.1| glutamate racemase [Streptococcus sp. M334]
gi|321281397|gb|EFX58407.1| glutamate racemase [Streptococcus sp. M334]
Length = 264
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I+ + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKINDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|322385930|ref|ZP_08059571.1| glutamate racemase [Streptococcus cristatus ATCC 51100]
gi|321270045|gb|EFX52964.1| glutamate racemase [Streptococcus cristatus ATCC 51100]
Length = 264
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 18/249 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVVYIGDSARAPYGPRPAEQIRD 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A T G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKAKL-DIPVLGVILPGASAAIKSTTGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I + + + ++ VE +++ KK +
Sbjct: 111 KIGVIGTPMTVQSDIYRKKIEALSPEMEVQSLACPKFVPLVESN----ELQSSLTKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLHPLAGK-VDTLVLGCTHYPLLRPIIQNMMGPSVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDDHAL 250
+R D H L
Sbjct: 226 SR--DKHEL 232
>gi|307705571|ref|ZP_07642423.1| glutamate racemase [Streptococcus mitis SK597]
gi|307620848|gb|EFN99932.1| glutamate racemase [Streptococcus mitis SK597]
Length = 264
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E+++ + LG + P A + G
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSPGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
R
Sbjct: 226 GR 227
>gi|46199582|ref|YP_005249.1| glutamate racemase [Thermus thermophilus HB27]
gi|81567628|sp|Q72I52|MURI_THET2 RecName: Full=Glutamate racemase
gi|46197208|gb|AAS81622.1| glutamate racemase [Thermus thermophilus HB27]
Length = 257
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I +FDSG+GGL VL+ +R L+P F+Y D PYG + A+ +R + +
Sbjct: 2 KDPKAPIGVFDSGVGGLTVLKALRRLLPREEFLYFGDTARVPYGG-KPLAMVRRFAWEIA 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + V+ACNTA + +L F PA + A + + GLI +T
Sbjct: 61 GFLLRQGVKAIVVACNTASSAALPDLAEDLSVPVFGVVEPAARAARGFRKVGLIGTQATV 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ Y + ++ C + + VEE + +D + + ++E
Sbjct: 121 ES--GAYPRYVDLAWAKACPLFV-------PLVEE-----GLWDDPVALLVARHYLEDAP 166
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
K + ++L CTHYP + + P V LD+++ AR AR L
Sbjct: 167 KDLEALILGCTHYPFLKGAIGAVLPG-VALLDSAELTAREVARAL 210
>gi|56421203|ref|YP_148521.1| glutamate racemase [Geobacillus kaustophilus HTA426]
gi|261418316|ref|YP_003251998.1| glutamate racemase [Geobacillus sp. Y412MC61]
gi|297529170|ref|YP_003670445.1| glutamate racemase [Geobacillus sp. C56-T3]
gi|319767724|ref|YP_004133225.1| glutamate racemase [Geobacillus sp. Y412MC52]
gi|81557797|sp|Q5KWI3|MURI_GEOKA RecName: Full=Glutamate racemase
gi|56381045|dbj|BAD76953.1| glutamate racemase [Geobacillus kaustophilus HTA426]
gi|261374773|gb|ACX77516.1| glutamate racemase [Geobacillus sp. Y412MC61]
gi|297252422|gb|ADI25868.1| glutamate racemase [Geobacillus sp. C56-T3]
gi|317112590|gb|ADU95082.1| glutamate racemase [Geobacillus sp. Y412MC52]
Length = 264
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 7/246 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ IY+ D PYG + +R + D
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKEQIIYLGDTARCPYGPRPVEEV-RRFTWQMIDY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + VIACNTA + D++R+ + LG + P + A T+ G I ++ T
Sbjct: 60 LRQYPLKMLVIACNTATAVALDDVRAKL-DIPVLGVIHPGARAALKATRRGHIGVIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + S + + ++ VE + E +
Sbjct: 119 TIRSRAYEKALQSINPRVQVESLACPKFVPLVESG----DFEGQEAMAIVAESLAPLRPL 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
DV++L CTHYPL+ + R V + + AR +L T + L
Sbjct: 175 PIDVLILGCTHYPLLAPLIRTYMGKRVKLICSGGETAREVSAILHHSQLLYTGEREPEHL 234
Query: 251 FLSGKP 256
F + P
Sbjct: 235 FFTTGP 240
>gi|313673160|ref|YP_004051271.1| glutamate racemase [Calditerrivibrio nitroreducens DSM 19672]
gi|312939916|gb|ADR19108.1| glutamate racemase [Calditerrivibrio nitroreducens DSM 19672]
Length = 261
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 8/214 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GGL V + + YV D PYGN + K + L ++
Sbjct: 2 SIGVFDSGVGGLTVFKSIADRFKTVDIYYVGDTARVPYGNKSRDTIVKYSLELTEFLVKS 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA + D L++ + ++ +G V P A T++G I ++ T AT+
Sbjct: 62 FAVDLVVVACNTASSYALDFLKNRY-NIPIIGVVEPGCIAAINATKNGKIGVIGTQATIN 120
Query: 134 RTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+N + + ++ +L VEE + + +K+ ++G I EG
Sbjct: 121 SNSYANTLSALTGGGVRVYQKGCPLLVPLVEEGKIEHPVTKIILKEYLDG--IVSEG--I 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
D ++L CTHYP++ V + P ++ +D+S +I
Sbjct: 177 DTLILGCTHYPVLKDVINSIYP-ELNLVDSSVAI 209
>gi|302024339|ref|ZP_07249550.1| glutamate racemase [Streptococcus suis 05HAS68]
gi|330833329|ref|YP_004402154.1| glutamate racemase [Streptococcus suis ST3]
gi|329307552|gb|AEB81968.1| glutamate racemase [Streptococcus suis ST3]
Length = 264
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V +++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ V ACNTA + +E++ + LG + P A TQ+G
Sbjct: 53 YTWQLVNFLLTKNVKMI-VFACNTATAVAWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T++ I + + + ++ A VE + + + K++
Sbjct: 111 KVGVLGTAMTIQSDIYRQKIQALSPETQVDSLACPKFAPLVESNS-----HQSSLAKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + D +VL CTHYPL+ + + V +D+ AR LL ++
Sbjct: 166 YETLRPLVGKVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225
Query: 242 TRVFDD--HALFLSGKP 256
+R D H + + P
Sbjct: 226 SRTEKDIQHRFYTTASP 242
>gi|197303990|ref|ZP_03169022.1| hypothetical protein RUMLAC_02727 [Ruminococcus lactaris ATCC
29176]
gi|197296958|gb|EDY31526.1| hypothetical protein RUMLAC_02727 [Ruminococcus lactaris ATCC
29176]
Length = 273
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 17/223 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V +++ +P+ + +Y D PYG+ + + + FS+ + ++
Sbjct: 11 VFDSGVGGLTVAREISRQLPDENIVYFGDTARVPYGSKSQNTIIR-----FSEQIIRFLK 65
Query: 78 VLS----VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
VIACNTA L D ++ F + LG V P + A T++ + ++ T AT+
Sbjct: 66 TKEVKAIVIACNTASALALDAVKDEF-DIPILGVVIPGARAAVEATKNRKVGVVGTEATV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191
+ + +I + + + + VEE KE ++ +E+ ++E
Sbjct: 125 QSGMYTKVIQGMNPEITVIEKACPLFVPLVEE-----GFKEHQVTEEVIEYYLESMRSTD 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYPL+ R + ++ + A +CLL
Sbjct: 180 IDAMILGCTHYPLLRSKIRAYMGDKIQIVNPAYETAMDLKCLL 222
>gi|15827591|ref|NP_301854.1| glutamate racemase [Mycobacterium leprae TN]
gi|221230068|ref|YP_002503484.1| glutamate racemase [Mycobacterium leprae Br4923]
gi|1171077|sp|P46705|MURI_MYCLE RecName: Full=Glutamate racemase
gi|254766120|sp|B8ZR57|MURI_MYCLB RecName: Full=Glutamate racemase
gi|466915|gb|AAA50890.1| murI [Mycobacterium leprae]
gi|13093142|emb|CAC31553.1| glutamate racemase [Mycobacterium leprae]
gi|219933175|emb|CAR71267.1| glutamate racemase [Mycobacterium leprae Br4923]
Length = 272
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 6/211 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ +
Sbjct: 10 VFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLSIPEIRAHALAICDDLVGRGVK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+L VIACNTA + R + +PA+++A A T++G I ++ T R T
Sbjct: 70 IL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVAATRNGRIGVIGT----RATIA 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
S+ + ++++ V+ CG+ ++ EG + D +VL
Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVECGVT-SGRQVLGLAEGYLEPLQRSGVDTLVL 183
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
CTHYPL+ + + V + +++ A+
Sbjct: 184 GCTHYPLLAGLIQLAMGENVTLVSSAEETAK 214
>gi|198275393|ref|ZP_03207924.1| hypothetical protein BACPLE_01555 [Bacteroides plebeius DSM 17135]
gi|198271729|gb|EDY95999.1| hypothetical protein BACPLE_01555 [Bacteroides plebeius DSM 17135]
Length = 281
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
YP I +FDSG GGL +L K +P+Y ++Y+ D+ PYG + +
Sbjct: 2 YPLSAPHTGPIGVFDSGYGGLTILGKFIERLPQYDYLYLGDNARAPYGTRSFEVVYDFTL 61
Query: 66 FLFSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + P L ++ACNTA ++ +++L P+ LG + P ++ T+
Sbjct: 62 QAVKKLFELGCP-LVILACNTASAKALRSIQQNDLPHMDPTRRVLGVIRPTVECIGEITR 120
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+G + +L+T T+R I + ++ + VE + +KK
Sbjct: 121 NGHVGLLATAGTVRSESYPLEIKKIFPDIQVTGMACPMWVPLVENKEYDGDGADYFVKKY 180
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
I+ I ++ D ++L CTHYPL++ RQ +P + + + ++ + L R
Sbjct: 181 IDT--ILQKDPDIDTLILGCTHYPLLLQKIRQYTPSHIRLVTQGEYVSESLKDYLSR 235
>gi|311031420|ref|ZP_07709510.1| glutamate racemase [Bacillus sp. m3-13]
Length = 269
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 12/251 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q I + DSG+GGL V +++ +P+ IY+ D PYG + + + +
Sbjct: 1 MQRPIGVIDSGVGGLTVAKEIMRQLPKERIIYLGDTARCPYGPRPVDEV-RLYTWEMTRY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + + VIACNTA ++ DE+R + +G V P + A T + + ++ T
Sbjct: 60 LLTHDIKMLVIACNTATAVVLDEIREQL-DIPVIGVVDPGARTALKVTSNYQVGVIGTVG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIEKEG 189
T+ +N + S ++ + ++ VE E E KEI E +G
Sbjct: 119 TINSGAYANALKSINNEVKVESLACPNFVPLVESGEF-----EGERAKEIVEDTLHLFKG 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDD 247
+ D ++L CTHYPL+ + + + + + D AR +L ++ + R ++
Sbjct: 174 SKIDTLILGCTHYPLLTPTIQAVMGDGIQLISSGDETAREVSTILNFKKLLNKKQRT-EN 232
Query: 248 HALFLSGKPDI 258
H + +G ++
Sbjct: 233 HQFYTTGSKEL 243
>gi|196229452|ref|ZP_03128317.1| glutamate racemase [Chthoniobacter flavus Ellin428]
gi|196226684|gb|EDY21189.1| glutamate racemase [Chthoniobacter flavus Ellin428]
Length = 295
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 1 MKIDNYP-CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
M D +P + + ++DSG GGL VL+++R +PE +IY+ D PYG +
Sbjct: 1 MPADFFPNASSPISCPVGVYDSGYGGLTVLRQLRRTLPELDYIYLGDSGRAPYGGRDVDT 60
Query: 60 L----KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA--FLGAVPAIKQ 113
+ ++ + LF++ + V+AC+T + L+ + S LG +
Sbjct: 61 ILDFAEQCVERLFAEGCR-----VVVVACHTVSCVALRHLQHRYGSAERRILGVTIPAAE 115
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
AA G I + T T+ + ++ + V + +LA VEE +I
Sbjct: 116 AAVNRTRGHIGFVGTARTVASHTFRTEVRKLNAEVKVTEVPAPLLAPIVEEGWEDTEIAR 175
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+++ + F D +VL CTHYPL+ F++L+P PV L+ + +A R R
Sbjct: 176 LAVQRYL-AMF-----DGVDTLVLGCTHYPLLEREFQELTPAPVQVLNPAPEVAERFRA 228
>gi|111023014|ref|YP_705986.1| glutamate racemase [Rhodococcus jostii RHA1]
gi|110822544|gb|ABG97828.1| probable glutamate racemase [Rhodococcus jostii RHA1]
Length = 257
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 16/244 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ I D G P+G + + R++ LD+
Sbjct: 3 VALIDSGLGMLPTSAWLRKLRPDLDLILALDPDGAPWGPKPEQWVIDRVLATAQRCLDRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ V+ CNTA D +R P++ +G VPAIK AAA +S +++ +T AT
Sbjct: 63 AEVI-VLPCNTASVTALDHVREFVGPAVPVVGTVPAIKPAAAACES--VAVWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI + + + V+ LA ++ E + +E+
Sbjct: 120 RYQADLIEKFGNGSSVVGVACHGLAEAIDR-------GERDAATAAIASAVERTPDDVGG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LFL 252
+VL CTHYPL+ P V D+++++A + L RI+ + +FL
Sbjct: 173 VVLGCTHYPLMADEIAAQLPAGVRLFDSAEAVATQT---LRRIDALNRPSAGEGTVEVFL 229
Query: 253 SGKP 256
SG+P
Sbjct: 230 SGRP 233
>gi|212637364|ref|YP_002313889.1| glutamate racemase [Shewanella piezotolerans WP3]
gi|212558848|gb|ACJ31302.1| Glutamate racemase [Shewanella piezotolerans WP3]
Length = 273
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 21/233 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I IFD+GIG + +K+R P+ +Y+AD FPYG+ L + + +
Sbjct: 1 MQKAIAIFDAGIGSYSITEKLRKAFPKADLVYLADRASFPYGHKTQPELLSLIYSAMNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA- 130
D Y P L V+A N + +++R + +G P +K+A + S L+ +L +
Sbjct: 61 QDNYSPQLIVLASNVPSVTVLEQVRELI-DVPIIGVYPPVKKALDISTSSLVGVLGVKSL 119
Query: 131 ----TLRRTYTSNLI-----HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ R +N+I S+ + +HLV S E+ + ++ +K+ I+
Sbjct: 120 VCSEQMTRYIENNVIKGQQAKSFDASELVHLVES-------GEFLFNQEKTKETVKRYID 172
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++ D L+ TH P + F L P +++LD +D + R ++
Sbjct: 173 TLLVQY--PTMDTFTLSSTHLPWLWDYFTTLYP-TLNFLDPADDVVAGIRSVV 222
>gi|52141014|ref|YP_085815.1| glutamate racemase [Bacillus cereus E33L]
gi|81686030|sp|Q633V2|MURI_BACCZ RecName: Full=Glutamate racemase
gi|51974483|gb|AAU16033.1| glutamate racemase [Bacillus cereus E33L]
Length = 269
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTERCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T++ + S ++ +V S+ VE G E E+ E+ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRV---VVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245
D ++L CTHYP++ V +Q+ V + + D AR +L +N + +
Sbjct: 175 NTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 232
Query: 246 DDHALFLSGK 255
DH +GK
Sbjct: 233 SDHLFLTTGK 242
>gi|223934204|ref|ZP_03626140.1| glutamate racemase [Streptococcus suis 89/1591]
gi|223897120|gb|EEF63545.1| glutamate racemase [Streptococcus suis 89/1591]
Length = 264
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V +++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ V ACNTA + +E++ + LG + P A TQ+G
Sbjct: 53 YTWQLVNFLLTKNVKMI-VFACNTATAVAWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T++ I + + + ++ A VE + + + K++
Sbjct: 111 KVGVLGTAMTIQSDIYRQKIQALSPKTQVDSLACPKFAPLVESNS-----HQSSLAKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + D +VL CTHYPL+ + + V +D+ AR LL ++
Sbjct: 166 YETLRPLVGKVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225
Query: 242 TRVFDD--HALFLSGKP 256
+R D H + + P
Sbjct: 226 SRTEKDIQHRFYTTASP 242
>gi|289549102|ref|YP_003474090.1| glutamate racemase [Thermocrinis albus DSM 14484]
gi|289182719|gb|ADC89963.1| glutamate racemase [Thermocrinis albus DSM 14484]
Length = 255
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL+ +R P+ +Y+ D PYG+ + +R ++ L +
Sbjct: 3 IGVFDSGIGGLTVLKAIRERYPKVDLLYLGDTARVPYGSKSKETV-QRYSIECAEFLLGH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA D LR P F P +++A SG + ++ T T+
Sbjct: 62 DVDLVVVACNTASAYALDLLRERLPVEVFGVIEPGVEEALRVCTSGKVGVIGTRGTISSG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE---KEG 189
NL+ +V AC + ++E ++ + +E K+
Sbjct: 122 AYQNLLQKK--------------GVKVLAKACPLFVPLVEEGMVRGPVAELLVEHYLKDL 167
Query: 190 KRT--DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
K + D ++L CTHYPL+ V + V +D++ + AR
Sbjct: 168 KESGIDTLILGCTHYPLLKDVIQAYMDGTV-IVDSAHATAR 207
>gi|298370218|ref|ZP_06981534.1| glutamate racemase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281678|gb|EFI23167.1| glutamate racemase [Neisseria sp. oral taxon 014 str. F0314]
Length = 269
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 6/203 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + +Y D PYG ++ + + +L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIVYFGDTARVPYGTKSRATIETFALQIVDFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ L +IACNT + ++R +M L + A +AA + T++ I I++T T
Sbjct: 66 EQDVKAL-IIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALSTTRNNRIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IHS + ++ +L VEE ++ ++ ++ ++
Sbjct: 125 VNSNAYARAIHSRNPDTLVRTQAAALLVPLVEEGWLDHEVTRLTAREYLKPLLVDN---- 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
D +VL CTH+PL+ + RQ +P
Sbjct: 181 IDTLVLGCTHFPLLKPLIRQEAP 203
>gi|228903012|ref|ZP_04067151.1| Glutamate racemase [Bacillus thuringiensis IBL 4222]
gi|228856605|gb|EEN01126.1| Glutamate racemase [Bacillus thuringiensis IBL 4222]
Length = 269
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYQVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 174 KSTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 233 -SDHLFLTTGK 242
>gi|60680023|ref|YP_210167.1| putative glutamate racemase [Bacteroides fragilis NCTC 9343]
gi|265765173|ref|ZP_06093448.1| glutamate racemase [Bacteroides sp. 2_1_16]
gi|60491457|emb|CAH06207.1| putative glutamate racemase [Bacteroides fragilis NCTC 9343]
gi|263254557|gb|EEZ25991.1| glutamate racemase [Bacteroides sp. 2_1_16]
Length = 280
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA T+ ++L + P LG + P + + TQ+ + IL+T
Sbjct: 71 GCHLVILACNTASAKALRTIQMNDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H + + + VE + + I+K I+ +
Sbjct: 131 GTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEANGEGADFFIRKYIDNLLAKD-- 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ D +VL CTHYP+++ ++ P V + + +A + L R
Sbjct: 189 RQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHR 235
>gi|288553638|ref|YP_003425573.1| glutamate racemase [Bacillus pseudofirmus OF4]
gi|288544798|gb|ADC48681.1| glutamate racemase [Bacillus pseudofirmus OF4]
Length = 269
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 34/261 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + +
Sbjct: 1 MDRPIGVIDSGLGGLTVAKELMRQLPKEEIVYLGDSARCPYGPRTSEEVRTYTWEMINRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L++ +L VIACNTA ++ +E++ S+ +G V P A T+ ++++ T
Sbjct: 61 LEENMKML-VIACNTATAVVLEEVKKEL-SIPVVGVVHPGATSALKVTKKDHVAVIGTVG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEKE 188
T+ S + + S+ +VE AC + + E + + E I KE
Sbjct: 119 TIE------------SGAYEKALKSINHEVKVESLACPPFVPLVERGVFEGAEADLIVKE 166
Query: 189 ------GKRTDVIVLACTHYPLIVHVF-RQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ +Q+ P V + + D AR LL H
Sbjct: 167 VLEPLQNRGFDTMILGCTHYPLLKDTIQKQMGP-DVQLISSGDETAREVSGLL----YHN 221
Query: 242 TRVFDD-----HALFLSGKPD 257
+F D H F +G D
Sbjct: 222 NLLFTDQRKPTHRFFTTGDKD 242
>gi|284043326|ref|YP_003393666.1| glutamate racemase [Conexibacter woesei DSM 14684]
gi|283947547|gb|ADB50291.1| glutamate racemase [Conexibacter woesei DSM 14684]
Length = 283
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 8/216 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL ++ +P F+Y+ D FPYG+ L+ + +L
Sbjct: 14 IAVFDSGVGGLTVLHELLVSLPSEDFLYLGDTARFPYGDKSQEELRVCSAEIADHLLVAG 73
Query: 76 QPVLSVIACN--TAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+L V+AC TA L E R + LG + PA + A T SG I +L+TPAT+
Sbjct: 74 AKLL-VVACGSATAAALPLLEERLAGSGVDVLGVIAPAAQLAVEATASGRIGVLATPATV 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+N I + + V LA ++ G E + + +
Sbjct: 133 ASGAYANAIAASDPHVRLESVPCPDLAPIIQ---SGFPFDE-RVVETVRRYTAPLRAAEV 188
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L THYPL+ + +++ V + + + + R
Sbjct: 189 DTVILGSTHYPLVAPMLQRMLGRGVHLVTSGEGVVR 224
>gi|229817186|ref|ZP_04447468.1| hypothetical protein BIFANG_02445 [Bifidobacterium angulatum DSM
20098]
gi|229784975|gb|EEP21089.1| hypothetical protein BIFANG_02445 [Bifidobacterium angulatum DSM
20098]
Length = 259
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 7/221 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++ MP+ +Y D PYG ++ L F + K
Sbjct: 7 IGVFDSGLGGISVARQIAHDMPDEKVLYFGDSANAPYGTKTPQQVRD-LSFAIVEQFVKQ 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133
VIACNTA + D LR T+ + +G PA+K A + + + +TP TLR
Sbjct: 66 GVKAVVIACNTATSAAADALRDTY-DIPIIGMEPALKVACDRGHGHRQRVIVAATPLTLR 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ + + I L + VE G D + + + F + D
Sbjct: 125 ERKFAKLMDRFKADHTIFPEPCPGLVNIVEH---GQLDDHDTVMRTLHHYFGNYDLPTID 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+ FR+L P +D ++ R +L
Sbjct: 182 SVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLHVVL 222
>gi|83312678|ref|YP_422942.1| glutamate racemase [Magnetospirillum magneticum AMB-1]
gi|82947519|dbj|BAE52383.1| Glutamate racemase [Magnetospirillum magneticum AMB-1]
Length = 273
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P IY+ D PYG + + ++ Y
Sbjct: 9 IGIFDSGVGGLTVLKAVRERLPGESLIYLGDTARLPYGTKSAQTVAAYALEATRRLV-SY 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
++A NT+ + LR+ FP + +G V P AAA + G I++++T + ++
Sbjct: 68 GIKALLVADNTSSAHALEGLRAAFPGLPVIGVVEPGATAAAAASARGRIAVIATESAVQA 127
Query: 135 -TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
TY ++HS + + + S VEE I E + ++ F + D
Sbjct: 128 GTYPRAILHSR-PNAQVTQLPCPLFVSMVEEGLVDGPIAEQIARHYLDPLFSGPDA--AD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
++L CTH+P + +FR+L V +D++ + A
Sbjct: 185 CLLLGCTHFPALAPLFRRLLGRDVAVVDSASTTA 218
>gi|228974598|ref|ZP_04135164.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981193|ref|ZP_04141493.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228778393|gb|EEM26660.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228785001|gb|EEM33014.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
Length = 274
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T++ + S ++ +V S+ VE G E E+ E+ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245
D ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 180 STGIDTLILGCTHYPILGPVIKKVMGNKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 237
Query: 246 DDHALFLSGK 255
DH +GK
Sbjct: 238 SDHLFLTTGK 247
>gi|312870481|ref|ZP_07730601.1| glutamate racemase [Lactobacillus oris PB013-T2-3]
gi|311094038|gb|EFQ52362.1| glutamate racemase [Lactobacillus oris PB013-T2-3]
Length = 266
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL VL+ +R +P+ ++V D FPYG + A +RL L ++
Sbjct: 6 IGVMDSGLGGLSVLRVLRRELPDESLLFVGDQGHFPYGT-KTQAEVRRLALAIGRFLVRH 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA T + +G + AA T I ++ T +T++
Sbjct: 65 DAKLMVVACNTA-TGAALPALQAALPIPVIGVIRPGASAALATNPRTIGVIGTDSTIKNG 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + + L S VE G + + K ++ CF + + +
Sbjct: 124 AYERTLHELQPAVQVVSQPAQPLVSIVEHGQTGTPAAQQAVDKVLQ-CFATQP---VETL 179
Query: 196 VLACTHYPLIV-HVFRQLSP 214
+L CTH+P + + R+L P
Sbjct: 180 ILGCTHFPFLSREIQRRLGP 199
>gi|213691663|ref|YP_002322249.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|254766108|sp|B7GPZ1|MURI_BIFLI RecName: Full=Glutamate racemase
gi|213523124|gb|ACJ51871.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|320457754|dbj|BAJ68375.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 264
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++ MP H +Y D PYG ++ L DI++++
Sbjct: 7 IGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRA----LSFDIVERF 62
Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--------AYTQSGLIS 124
Q V + VIACNTA + ++LR + + +G PA+K A + +
Sbjct: 63 VRQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TP TLR + L+ + SQ I L VE G D + + + G F
Sbjct: 122 VAATPLTLRERKFATLMDRFDSQNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + + D +VL CTH+ FR+L P +D ++ R +L
Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVL 228
>gi|229032138|ref|ZP_04188115.1| Glutamate racemase [Bacillus cereus AH1271]
gi|228729194|gb|EEL80193.1| Glutamate racemase [Bacillus cereus AH1271]
Length = 274
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 179 KNTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 238 -SDHLFLTTGK 247
>gi|229175163|ref|ZP_04302679.1| Glutamate racemase [Bacillus cereus MM3]
gi|228608299|gb|EEK65605.1| Glutamate racemase [Bacillus cereus MM3]
Length = 274
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 179 KNTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 238 -SDHLFLTTGK 247
>gi|75760743|ref|ZP_00740765.1| Glutamate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74491771|gb|EAO54965.1| Glutamate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 274
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYQVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 179 KSTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 238 -SDHLFLTTGK 247
>gi|228941671|ref|ZP_04104218.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228817883|gb|EEM63961.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326942279|gb|AEA18175.1| glutamate racemase [Bacillus thuringiensis serovar chinensis CT-43]
Length = 269
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T++ + S ++ +V S+ VE G E E+ E+ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245
D ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 175 STGIDTLILGCTHYPILGPVIKKVMGNKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 232
Query: 246 DDHALFLSGK 255
DH +GK
Sbjct: 233 SDHLFLTTGK 242
>gi|229105119|ref|ZP_04235770.1| Glutamate racemase [Bacillus cereus Rock3-28]
gi|228678300|gb|EEL32526.1| Glutamate racemase [Bacillus cereus Rock3-28]
Length = 273
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 179 KNTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 238 -SDHLFLTTGK 247
>gi|306820477|ref|ZP_07454113.1| glutamate racemase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551552|gb|EFM39507.1| glutamate racemase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 271
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 17/229 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+G VL K+ +MP ++IY D PYG L+K L D L +
Sbjct: 6 IGIFDSGVGAFSVLNKLVEVMPNENYIYFGDSGHNPYGQKTAEELQK-LCSCIVDFLTRK 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR- 133
+ VIACNTA D L+ + + +G + P K+A T++ I + ST T +
Sbjct: 65 EVKAIVIACNTATVAALDYLQERY-YLPIIGVINPGAKEALRLTKNNKIGVCSTVFTAKT 123
Query: 134 RTYTS--NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEG 189
Y + N + + ++ S+ LA+ +E G + ++ I KE+ G F +
Sbjct: 124 HGYLNDINKVSNNDKSLKVYEEGSVNLANIIEN---GFEYNDENEAIIKELVGRFTD--- 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D ++L CTHYPL+ +F + + + +D A AR +L N
Sbjct: 178 -NIDTLILGCTHYPLVEDLFAKY--FKGNIVDPGMQTAIEARNILKAKN 223
>gi|240169479|ref|ZP_04748138.1| glutamate racemase [Mycobacterium kansasii ATCC 12478]
Length = 271
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 19/257 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL V + + +P+ IYV D PYG ++ + + D++D+
Sbjct: 10 IFDSGVGGLTVARAIIDQLPDEDIIYVGDTGNGPYGPLTIPEIRAHALAIGDDLVDRGVK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
VL VIACN+A + R + +PA+++A A T++G I ++ T R T T
Sbjct: 70 VL-VIACNSASAACLRDARERYDVPVVEVILPAVRRAVAATRNGRIGVIGT----RATIT 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
S+ + ++++ V+ G+ ++ EG + D +VL
Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVERGVTSGR-QVLGLAEGYLEPLQRAGVDTLVL 183
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR-------RARCLLPRINTHQTRVFDDHAL 250
CTHYPL+ + + V + +++ A+ ++ L P TRVF+
Sbjct: 184 GCTHYPLLSGLIQLAMGDHVTLVSSAEETAKEVLRVLTQSDLLRPHDAPPATRVFE---- 239
Query: 251 FLSGKPDIAMRRLMQGF 267
+G P+ A RL F
Sbjct: 240 -ATGDPE-AFTRLAARF 254
>gi|229098955|ref|ZP_04229890.1| Glutamate racemase [Bacillus cereus Rock3-29]
gi|229117984|ref|ZP_04247344.1| Glutamate racemase [Bacillus cereus Rock1-3]
gi|228665433|gb|EEL20915.1| Glutamate racemase [Bacillus cereus Rock1-3]
gi|228684453|gb|EEL38396.1| Glutamate racemase [Bacillus cereus Rock3-29]
Length = 268
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 174 KNTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 233 -SDHLFLTTGK 242
>gi|291533966|emb|CBL07079.1| glutamate racemase [Megamonas hypermegale ART12/1]
Length = 270
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL--FSDILD 73
I +FDSG+GGL VL+++R L+P +FI+V D PYG+ + + FL F D
Sbjct: 7 IGVFDSGLGGLTVLKELRRLLPHENFIFVGDSARAPYGSRTPEEI---ISFLQQFMDYFQ 63
Query: 74 KYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++V ACNT + +IKD+ S A + PAI A + + I +++T
Sbjct: 64 SRGVKMAVCACNTMTSYGYPVIKDKT-----SFALVPMNPAIIPAVKASANKHIGVIATE 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+++ + Q + V +E I +D I + ++ + +
Sbjct: 119 ATIKKGMHKQAASNLDPQIKVFGVGCPKFVPLIETG----HIHDDAIDEAVQEYADKFKT 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
++L CTHYP+I V + V ++ + A+ A +L + N T+
Sbjct: 175 SDIHSLILGCTHYPIISEVLTKHFGKDVALINPALETAKDAATILTKNNLLNTQ 228
>gi|304317524|ref|YP_003852669.1| glutamate racemase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302779026|gb|ADL69585.1| glutamate racemase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 264
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 28/252 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL++++ L+P +IY D PYG ++K + + +K
Sbjct: 6 IGVFDSGVGGLTVLKRLKELLPNEDYIYFGDTKRVPYGEKSKKEIEKYARQIVHFMNEKN 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATLR- 133
++ VIACNT I ++ + + F + A ++AAY T++ + +++T T+
Sbjct: 66 TKII-VIACNTTCASID---KNEYSEILF-NVLEAGAESAAYLTKNKKVGVIATTRTIES 120
Query: 134 RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
R+Y N+ I + C + LV LA+ E + C KE
Sbjct: 121 RSYEKNIKLIDSGIDVFGKACPRFVPLVEEG-LANSDEAFKCA---------KEYLSVLN 170
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+E D +VL CTHYP++++ + V +D + ++ + + L +R+
Sbjct: 171 NEE---IDTLVLGCTHYPILINAIKNAVHKDVIIVDPAIKLSEKVKSYLEENAMLNSRLT 227
Query: 246 DDHALFLSGKPD 257
F+SG +
Sbjct: 228 GKTEYFVSGNKE 239
>gi|54295149|ref|YP_127564.1| hypothetical protein lpl2229 [Legionella pneumophila str. Lens]
gi|53754981|emb|CAH16469.1| hypothetical protein lpl2229 [Legionella pneumophila str. Lens]
Length = 279
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 8/214 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + ++++
Sbjct: 15 AIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMAKILVER 74
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA T L+S + L P A + T++ I++L+T T+
Sbjct: 75 RIKAL-VIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLATETTIA 133
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+LI + + + + +L + EE + + +K ++ E D
Sbjct: 134 SRAYHDLIIKNLPEAVVSTRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE------D 187
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
++L CTH+P+ + L P V +D++ + A
Sbjct: 188 AVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATA 221
>gi|253698914|ref|YP_003020103.1| glutamate racemase [Geobacter sp. M21]
gi|251773764|gb|ACT16345.1| glutamate racemase [Geobacter sp. M21]
Length = 278
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L++
Sbjct: 5 AIGIFDSGVGGLTVLKEVVRALPQEDTIYLGDTARVPYGTKSPETVVRYSRQIARYLLNR 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+L V+ACNTA + L+ F S+ +G + P + AAA T+SG + ++ T AT+
Sbjct: 65 DIKLL-VVACNTASAVALSALQQEF-SIPIVGVIEPGARAAAAATKSGKVGVIGTAATVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR-T 192
+ + I + + + EE ++E+ + G ++E K
Sbjct: 123 SSAYTKAIKRINPDIEVVNRACPLFVPLAEEGWV-----DNEVARLTAGIYLEDLKKHGV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTHYP++ V ++ V +D+++ A
Sbjct: 178 DTLVLGCTHYPILKDVIAEVMGPEVTLVDSAEQTA 212
>gi|297242787|ref|ZP_06926725.1| glutamate racemase [Gardnerella vaginalis AMD]
gi|296888998|gb|EFH27732.1| glutamate racemase [Gardnerella vaginalis AMD]
Length = 257
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 7/225 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L +I +FDSG+GG+ V +++ +P +Y D PYG +KK L F +
Sbjct: 3 LSAAIGVFDSGLGGISVARQLHAALPHERIVYFGDSANAPYGIKTPEEVKK-LSFAIVEH 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTP 129
+ VIACNTA + ++LR+ + ++ +G PA+K A +S + + +TP
Sbjct: 62 FVRLNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGESQRVIVAATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TLR ++L+ + I L VE G D + + F E +
Sbjct: 121 LTLRERKFADLLQRFSQNNTIFSQPCPDLVRIVER---GELNDRDVVFAALHKYFDEYDL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+ FR+ P + +D ++ R +L
Sbjct: 178 DSIDSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKIL 222
>gi|2462097|emb|CAA71858.1| glutamate racemase [Bacillus cereus ATCC 14579]
Length = 258
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 174 KSTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 233 -SDHLFLTTGK 242
>gi|290579929|ref|YP_003484321.1| putative glutamate racemase [Streptococcus mutans NN2025]
gi|254996828|dbj|BAH87429.1| putative glutamate racemase [Streptococcus mutans NN2025]
Length = 264
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 8/226 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V++++ +P IY+ D PYG +K L + +L K +
Sbjct: 9 LDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 69 I-VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIY 126
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
I Q + ++ VE K+ KK + GK D +VL
Sbjct: 127 EQKILDLSPQMKVRSLACPKFVPIVESN----KMNSSVAKKIVYESLSPLVGK-IDTLVL 181
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
CTHYPL+ + + + V+ +D+ R LL + +++R
Sbjct: 182 GCTHYPLLRPIIQNVMGPDVELIDSGAECVRDISVLLNYFDLNRSR 227
>gi|291299061|ref|YP_003510339.1| glutamate racemase [Stackebrandtia nassauensis DSM 44728]
gi|290568281|gb|ADD41246.1| glutamate racemase [Stackebrandtia nassauensis DSM 44728]
Length = 277
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL V + +R L+P +YV D PYG +++ + ++
Sbjct: 3 EAPIGIFDSGVGGLTVARAIRDLLPAERLLYVGDTARAPYGPRSIAQIRQYTLDACDYLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA + +LR F PA ++A T++G + ++ T AT+
Sbjct: 63 GQGVKAL-VIACNTASSASLADLRERFDVPVLEVIRPAARRAVTVTRNGRVGVIGTIATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ HS S ++S+ + V+ G+ ++ +G + +
Sbjct: 122 TSGAYGDAFHSAPSVT----LTSVACPAFVDFVERGVTTGR-QLLGLAQGYLEPLQRSQV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYPL+ + + V + +S+ AR
Sbjct: 177 DTLVLGCTHYPLLAGLIGLVMGDEVTLVSSSEEAAR 212
>gi|253564140|ref|ZP_04841597.1| glutamate racemase [Bacteroides sp. 3_2_5]
gi|251947916|gb|EES88198.1| glutamate racemase [Bacteroides sp. 3_2_5]
gi|301161564|emb|CBW21104.1| putative glutamate racemase [Bacteroides fragilis 638R]
Length = 280
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA T+ ++L + P LG + P + + TQ+ + IL+T
Sbjct: 71 GCHLVILACNTASAKALRTIQMNDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H + + + VE + + I+K I+ +
Sbjct: 131 GTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEASGEGADFFIRKYIDNLLAKD-- 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ D +VL CTHYP+++ ++ P V + + +A + L R
Sbjct: 189 RQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHR 235
>gi|284928811|ref|YP_003421333.1| glutamate racemase [cyanobacterium UCYN-A]
gi|284809270|gb|ADB94975.1| glutamate racemase [cyanobacterium UCYN-A]
Length = 281
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 25/234 (10%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+++YP I IFDSG+GGL V Q++ L+P+ +Y AD+ PYGN +
Sbjct: 4 VNDYP--------IGIFDSGVGGLTVFQEIHKLLPQESILYFADNARLPYGNRSSTEI-- 53
Query: 63 RLMFLFSDILD--KYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYT 118
L F+ +IL+ Y V ++V+ACNT+ L + +R F + LG V P + A Y+
Sbjct: 54 -LQFV-REILNWMSYSKVKMAVMACNTSSALALEAVRKEF-NFPILGVVLPGARAATKYS 110
Query: 119 QS-GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
G+IS L+T + I+ + + + L R + Y EI
Sbjct: 111 HRVGVISTLATAKSDSYRQAIQEINPNIKVWQVGCPELVPLIERDKIY----DFHTQEIL 166
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
K+ +EK D ++ CTHY + + + + P+ ++ +D + +A+ +
Sbjct: 167 KKYINPLLEKN---IDTLIYGCTHYRHLEEIIKNIIPYKIELIDPAYYVAQSVK 217
>gi|146329274|ref|YP_001208944.1| glutamate racemase [Dichelobacter nodosus VCS1703A]
gi|146232744|gb|ABQ13722.1| glutamate racemase [Dichelobacter nodosus VCS1703A]
Length = 264
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 6/222 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG + + +P+ I+ AD+ PYG+ + + +L +
Sbjct: 6 IGLFDSGVGGTSIWCAVCAELPQESTIFWADNAHAPYGDKSPAEIIELAARNTEQLLSRG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ +IACNTA LR+ + ++ F+ PAIK AA T++G + +L+T +TL
Sbjct: 66 CKMI-IIACNTASAHAAAILRTRY-NVPFVAVEPAIKPAALATKTGAVGVLATTSTLMSA 123
Query: 136 YTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
N + +V +Q ++ L++ + E +++ ++ + + D
Sbjct: 124 AFQNTVTRWVDTQKNVRLIARS--GRGIVELIESGQMESANMRALLAAHAQAFRAEHIDQ 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+VL CTHYP + + ++L P V +D+ ++AR++R +L +
Sbjct: 182 LVLGCTHYPYLRPLLQELLP-AVSIIDSGAAVARQSRRILAQ 222
>gi|295425843|ref|ZP_06818523.1| glutamate racemase [Lactobacillus amylolyticus DSM 11664]
gi|295064446|gb|EFG55374.1| glutamate racemase [Lactobacillus amylolyticus DSM 11664]
Length = 267
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 110/237 (46%), Gaps = 36/237 (15%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I + DSG GG V++K+ +PE I++ D+ PYG+ +
Sbjct: 1 MDNRP--------IGLLDSGDGGFSVVKKVIKKLPEESTIFIGDNAHMPYGDKSKEEVIE 52
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQA 114
+ + FL S + L + ACNTA + I+ E++ + G++ A++
Sbjct: 53 LTRHSVNFLLSRDVK-----LIIFACNTATAAAMSTIQKEIKPQIIGVIQSGSLAAVRT- 106
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKI 171
T++ +++ +TP T+ N I + + +++ LA VE +Y +++
Sbjct: 107 ---TENKKVAVSATPVTIASHAYKNEIQVRDPEIEVTELATPKLAPLVEAEEDYNTNLRV 163
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++ +K +GK D VL CTHYPLI F + P V +D +D +A+
Sbjct: 164 VKESLKP--------LQGKDFDTFVLGCTHYPLIQKEFEEALPDNVSIVDPADQVAQ 212
>gi|298386827|ref|ZP_06996382.1| glutamate racemase [Bacteroides sp. 1_1_14]
gi|298260501|gb|EFI03370.1| glutamate racemase [Bacteroides sp. 1_1_14]
Length = 280
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILNKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P LG + P ++ TQS I +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGDITQSRHIGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ IH + ++ + VE + + I+K I+ +
Sbjct: 131 GTIKSESYPLEIHKLFPDIQVSGIACPMWVPLVENNESQNEGADYFIRKYIDQLL--SKD 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
D ++L CTHYP+++ ++ +P + + + +A + L R
Sbjct: 189 PEIDTMILGCTHYPILLPKIQEYTPKHIRIVAQGEYVAESLKDYLSR 235
>gi|218296251|ref|ZP_03497007.1| glutamate racemase [Thermus aquaticus Y51MC23]
gi|218243323|gb|EED09853.1| glutamate racemase [Thermus aquaticus Y51MC23]
Length = 257
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 16/217 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL ++ +P+ F+Y D PYG+ + ++ +R + + L
Sbjct: 5 KAPIGVFDSGVGGLTVLTALKKALPQEDFLYFGDTARVPYGS-KPLSVVRRFAWEIAGFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA + +L F PA + A Y + GLI +T +
Sbjct: 64 LREGVKAIVVACNTASSAALPDLAEDLSVPVFGVLEPAAQVAQGYRKVGLIGTQATVGS- 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R Y + S+ C + + VEE + +D + I ++E+ +
Sbjct: 123 -RAYERYVDLSWAKACPLFV-------PLVEE-----GLWDDPVALLIARHYLEEAPEDL 169
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ ++L CTHYP + Q+ P V +D++++ A R
Sbjct: 170 EALILGCTHYPYLKRTIAQVLPG-VKLIDSAEATAGR 205
>gi|126348285|emb|CAJ90006.1| putative glutamate racemase [Streptomyces ambofaciens ATCC 23877]
Length = 280
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ I D G P+G L R + + +
Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPEDLTGRALAVAE-AAAAH 80
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ CNTA LR+ F P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 81 RPDALIVGCNTATVHALPALRARFEPALPVIGTVPAIKPAAA--GGGPVAIWATPATTGS 138
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +LI + + + V LA VE E I + G T
Sbjct: 139 PYQRDLIERFGGEATVTEVPCPGLADAVEHA------DEAAITAAVAAAAALTPGDVT-T 191
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 192 VVLGCTHYELVAERIR 207
>gi|296331613|ref|ZP_06874082.1| glutamate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305675428|ref|YP_003867100.1| glutamate racemase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296151208|gb|EFG92088.1| glutamate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305413672|gb|ADM38791.1| glutamate racemase [Bacillus subtilis subsp. spizizenii str. W23]
Length = 271
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 7/248 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
LD + + VIACNTA + ++++ + + +G + P + A T++ I ++ T
Sbjct: 61 LDNHHIKMLVIACNTATAIALEDIQRSV-GIPVVGVIQPGARAAIKVTENQHIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE K ++ +K +
Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKT----SLYPLKDT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH
Sbjct: 176 SIDTLILGCTHYPILKESIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIVPDHQ 235
Query: 250 LFLSGKPD 257
+G D
Sbjct: 236 FLTTGARD 243
>gi|228967586|ref|ZP_04128610.1| Glutamate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|229081749|ref|ZP_04214242.1| Glutamate racemase [Bacillus cereus Rock4-2]
gi|229129779|ref|ZP_04258746.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
gi|229152686|ref|ZP_04280874.1| Glutamate racemase [Bacillus cereus m1550]
gi|228630832|gb|EEK87473.1| Glutamate racemase [Bacillus cereus m1550]
gi|228653695|gb|EEL09566.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
gi|228701594|gb|EEL54087.1| Glutamate racemase [Bacillus cereus Rock4-2]
gi|228792110|gb|EEM39688.1| Glutamate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 274
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T++ + S ++ +V S+ VE G E E+ E+ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245
D ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 180 STDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 237
Query: 246 DDHALFLSGK 255
DH +GK
Sbjct: 238 SDHLFLTTGK 247
>gi|194017293|ref|ZP_03055905.1| glutamate racemase [Bacillus pumilus ATCC 7061]
gi|194011161|gb|EDW20731.1| glutamate racemase [Bacillus pumilus ATCC 7061]
Length = 271
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 6/224 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ IYV D PYG ++ + + + +
Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYVGDTKRCPYGPRKEEEVLQYTWEMAHYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + + VIACNTA + DE++ T + +G + P + A T + I ++ T
Sbjct: 61 LRHHHIKMLVIACNTATAIALDEIKGTL-DIPVIGVIQPGARTAIKVTNNQQIGVIGTAN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + + ++ +L VE + ++ +K +E +++ G
Sbjct: 120 TIKSEAYKEALLSLKAGLAVQSLACPLLVPFVESGTFLDQTADEVVKDSLEP--MKETG- 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYP++ ++ V + + D AR A +L
Sbjct: 177 -IDTLILGCTHYPILKESIQRFMGSDVSIISSGDETAREASTIL 219
>gi|30022575|ref|NP_834206.1| glutamate racemase [Bacillus cereus ATCC 14579]
gi|206969797|ref|ZP_03230751.1| glutamate racemase [Bacillus cereus AH1134]
gi|218233554|ref|YP_002369290.1| glutamate racemase [Bacillus cereus B4264]
gi|218899650|ref|YP_002448061.1| glutamate racemase [Bacillus cereus G9842]
gi|228910317|ref|ZP_04074134.1| Glutamate racemase [Bacillus thuringiensis IBL 200]
gi|229048200|ref|ZP_04193769.1| Glutamate racemase [Bacillus cereus AH676]
gi|229072001|ref|ZP_04205211.1| Glutamate racemase [Bacillus cereus F65185]
gi|229111955|ref|ZP_04241499.1| Glutamate racemase [Bacillus cereus Rock1-15]
gi|229147053|ref|ZP_04275413.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|229180762|ref|ZP_04308100.1| Glutamate racemase [Bacillus cereus 172560W]
gi|229192695|ref|ZP_04319654.1| Glutamate racemase [Bacillus cereus ATCC 10876]
gi|296504971|ref|YP_003666671.1| glutamate racemase [Bacillus thuringiensis BMB171]
gi|226722979|sp|B7IIZ3|MURI_BACC2 RecName: Full=Glutamate racemase
gi|226722980|sp|B7HEB5|MURI_BACC4 RecName: Full=Glutamate racemase
gi|29898133|gb|AAP11407.1| Glutamate racemase [Bacillus cereus ATCC 14579]
gi|206735485|gb|EDZ52653.1| glutamate racemase [Bacillus cereus AH1134]
gi|218161511|gb|ACK61503.1| glutamate racemase [Bacillus cereus B4264]
gi|218541324|gb|ACK93718.1| glutamate racemase [Bacillus cereus G9842]
gi|228590785|gb|EEK48645.1| Glutamate racemase [Bacillus cereus ATCC 10876]
gi|228602740|gb|EEK60223.1| Glutamate racemase [Bacillus cereus 172560W]
gi|228636441|gb|EEK92911.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|228671519|gb|EEL26819.1| Glutamate racemase [Bacillus cereus Rock1-15]
gi|228711160|gb|EEL63125.1| Glutamate racemase [Bacillus cereus F65185]
gi|228723187|gb|EEL74563.1| Glutamate racemase [Bacillus cereus AH676]
gi|228849377|gb|EEM94214.1| Glutamate racemase [Bacillus thuringiensis IBL 200]
gi|296326023|gb|ADH08951.1| glutamate racemase [Bacillus thuringiensis BMB171]
Length = 269
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T++ + S ++ +V S+ VE G E E+ E+ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245
D ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 175 STDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 232
Query: 246 DDHALFLSGK 255
DH +GK
Sbjct: 233 SDHLFLTTGK 242
>gi|228960759|ref|ZP_04122398.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228798975|gb|EEM45950.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 269
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIACNTATAVVLEEMQKKLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T++ + S ++ +V S+ VE G E E+ E+ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLK 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245
D ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 175 STDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 232
Query: 246 DDHALFLSGK 255
DH +GK
Sbjct: 233 SDHLFLTTGK 242
>gi|121534586|ref|ZP_01666408.1| glutamate racemase [Thermosinus carboxydivorans Nor1]
gi|121306838|gb|EAX47758.1| glutamate racemase [Thermosinus carboxydivorans Nor1]
Length = 269
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHAL 60
DN+P I + DSGIGGL V++++ LMP+ HFIY D PYG+ E
Sbjct: 3 DNWP--------IGVCDSGIGGLTVVKELLELMPDEHFIYFGDTARIPYGDRPPAEILTF 54
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
++++ F++ K + V+ACNT + D FP +G I+ A A ++S
Sbjct: 55 MRQILRFFTEQKVK----MVVVACNTMTAVGLDMAWREFP-FPVVGVNTGIRSALAASRS 109
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G I +++T AT+ S H ++ + V AC + E ++++
Sbjct: 110 GRIGVIATQATV------------ASGLHERTAKAIDAKAVVALQACPKLVPLIE-REQL 156
Query: 181 EGCFIEK---------EGKRTDVIVLACTHYPLIVHVF-RQLSP 214
EG +E D ++L CTHYP I V R L P
Sbjct: 157 EGPAVEAAVAEYLRPLRDAGVDALILGCTHYPFISPVISRYLGP 200
>gi|116626345|ref|YP_828501.1| glutamate racemase [Candidatus Solibacter usitatus Ellin6076]
gi|116229507|gb|ABJ88216.1| glutamate racemase [Candidatus Solibacter usitatus Ellin6076]
Length = 252
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VLQ +R +P+ F+YV D PYG + A+ +D L
Sbjct: 2 IGVFDSGVGGLTVLQALRKRLPQREFLYVGDTARAPYGR-KPAAMVAGFACEIADYLCGR 60
Query: 76 QPVLSVIACNTAFTLIKDEL--RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL- 132
V+ACNTA + EL R P + A ++ A T++G I +++T AT+
Sbjct: 61 GVEAIVVACNTASAVALPELERRCKVPVWGVVDA--GVEAATRMTRTGHIGVIATRATIA 118
Query: 133 ----RRTYTSNLIHSYVSQCH--IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+R + + + +C +HLV + E E + ++
Sbjct: 119 SAAYQRRLEARGLRVWARECPMLVHLVEE--------------GLAESEEADVLSRHYLS 164
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D ++L CTHYPL+ ++ + V +D++ A R
Sbjct: 165 GR-PEIDTLILGCTHYPLLRASLQRAAGGHVRLVDSASVTAER 206
>gi|295696096|ref|YP_003589334.1| glutamate racemase [Bacillus tusciae DSM 2912]
gi|295411698|gb|ADG06190.1| glutamate racemase [Bacillus tusciae DSM 2912]
Length = 285
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I ++DSG+GGL VL MPE+ ++Y D + PYG+ ++ + ++ +
Sbjct: 3 IGMYDSGVGGLTVLAAFVRHMPEHDYVYFGDTLHAPYGDRTAEEVRALSLAAVKQLVARN 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+L V+ACNT+ ++ D L + +P + L + A+ A + I++L+T T+
Sbjct: 63 IDLL-VVACNTSASVAVDALVNHYPDLPVLTLLDAVGPAVRHLPGRKIALLATRRTVEAG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK----- 190
+HS + V++ L +E G+K + G F++ K
Sbjct: 122 VFEARLHSARPDAAVRSVAAPALVPLIER---GVK------DPAVYGPFLDSYLKPLATW 172
Query: 191 RTDVIVLACTHYPLI 205
DV+VL CTHYPLI
Sbjct: 173 GADVLVLGCTHYPLI 187
>gi|237785980|ref|YP_002906685.1| glutamate racemase [Corynebacterium kroppenstedtii DSM 44385]
gi|259509812|sp|C4LJY7|MURI_CORK4 RecName: Full=Glutamate racemase
gi|237758892|gb|ACR18142.1| Glutamate racemase [Corynebacterium kroppenstedtii DSM 44385]
Length = 288
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 13/238 (5%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++NS I +FDSG+GGL V + + P +YV D PYG + + + D
Sbjct: 1 MKNSPIGVFDSGVGGLTVARTIVDQAPTESIMYVGDTAHAPYGPKPREDIIRYSTAIADD 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
++ + ++ VIACNTA ++ D+ R + + +G + PA ++A A T++G + ++ T
Sbjct: 61 LVARGAKMI-VIACNTAASVFLDKARELY-DVPVVGVIEPASRRAVAATRNGRVGVIGTT 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ I + +H V VE GI +I E +
Sbjct: 119 GTIASGAYQRCIANLDPNIEVHAVDCPQFVPFVER---GITTGR-QIMGLAEAYLEPLQD 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTHYPL+ V + + V + +S+ + +PR+ +Q +F+D
Sbjct: 175 VGVDTVVLGCTHYPLLTGVIQLVMGDNVTLVSSSEEEGKE----VPRV-LYQEDLFND 227
>gi|319758794|gb|ADV70736.1| glutamate racemase [Streptococcus suis JS14]
Length = 264
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 18/257 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V +++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K ++ V ACNTA ++ +E++ + LG + P A TQ+G
Sbjct: 53 YTWQVGNFLLTKNVKMI-VFACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T++ I + + + ++ A VE + + + K++
Sbjct: 111 KVGVLGTAMTIQSDIYREKIQALSPETQVDSLACPKFAPLVESNS-----HQSSLAKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + D +VL CTHYPL+ + + V +D+ AR LL ++
Sbjct: 166 YETLRPLVGQVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225
Query: 242 TRVFDD--HALFLSGKP 256
+R D H + + P
Sbjct: 226 SRTEKDIQHRFYTTASP 242
>gi|238917207|ref|YP_002930724.1| glutamate racemase [Eubacterium eligens ATCC 27750]
gi|259509814|sp|C4Z114|MURI_EUBE2 RecName: Full=Glutamate racemase
gi|238872567|gb|ACR72277.1| glutamate racemase [Eubacterium eligens ATCC 27750]
Length = 265
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 8/218 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL VL + MPE +I+ AD PYG ++K + ++DK
Sbjct: 3 IGIFDSGIGGLSVLHQAMITMPEADYIFYADVDNVPYGEKTREEVRKLVDHAVGFLVDKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSG-LISILSTPATLR 133
+ V+ACNTA + LR + + +G PA+K A +T ++G + ++STP T +
Sbjct: 63 CQAI-VLACNTATSAAISYLREKY-KLPIIGIEPAVKPAVEHTSETGRRVMVVSTPVTAK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
LI Y + H+V + L V +A ++ ++ F
Sbjct: 121 GEKLKRLIDKYDDK---HVVDVVALPKLV-RFAQDDDFDSSDVTDYLKCEFAPYNLNDYS 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+VL CTH+ F +L P ++ +D + ++ +
Sbjct: 177 ELVLGCTHFNYFKDSFAKLFPDDLEMVDGNTGVSNNLK 214
>gi|53711792|ref|YP_097784.1| glutamate racemase [Bacteroides fragilis YCH46]
gi|52214657|dbj|BAD47250.1| glutamate racemase [Bacteroides fragilis YCH46]
Length = 280
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA T+ ++L + P LG + P + + TQ+ + IL+T
Sbjct: 71 GCHLVILACNTASAKALRTIQINDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H + + + VE + + I+K I+ +
Sbjct: 131 GTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEANSEGADFFIRKYIDNLLAKD-- 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ D +VL CTHYP+++ ++ P V + + +A + L R
Sbjct: 189 RQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHR 235
>gi|222152578|ref|YP_002561753.1| glutamate racemase [Streptococcus uberis 0140J]
gi|254766128|sp|B9DTR9|MURI_STRU0 RecName: Full=Glutamate racemase
gi|222113389|emb|CAR41037.1| glutamate racemase [Streptococcus uberis 0140J]
Length = 264
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 18/258 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +YV D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHESIVYVGDSARAPYGPRPADQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ V ACNTA + +E+++ S+ LG + P A T SG
Sbjct: 53 FTWELVNFLLTKNVKMI-VFACNTATAVAWEEVKNAL-SIPVLGVILPGSSAAIKSTTSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T++ I Q + ++ VE + + K+I
Sbjct: 111 KVGVIGTPMTIQSDIYRQKIQLLAPQIEVLSLACPKFVPIVESNET-----KSSVAKKIV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINT 239
+E + D +VL CTHYPL+ + + + V +D+ R LL +IN
Sbjct: 166 YETLEPLVGKVDTLVLGCTHYPLLRPIIQNVMGSEVTLIDSGAECIRDISVLLNYFQINA 225
Query: 240 HQTRVFDDHALFLSGKPD 257
+ D+ F + D
Sbjct: 226 SREEKKADNLFFTTAGTD 243
>gi|172058162|ref|YP_001814622.1| glutamate racemase [Exiguobacterium sibiricum 255-15]
gi|229486273|sp|B1YJW7|MURI_EXIS2 RecName: Full=Glutamate racemase
gi|171990683|gb|ACB61605.1| glutamate racemase [Exiguobacterium sibiricum 255-15]
Length = 271
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ SI + DSG+GGL V +++ +P IYV D + PYG + +++ + D
Sbjct: 1 MNRSIGVLDSGVGGLTVARELMRQLPHEQIIYVGDTLRCPYGPRPEEEIRQ-FTWEMIDF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L L VIACNTA ++ E R S+ +G + P + A T+S I ++ T
Sbjct: 60 LVAQGVKLIVIACNTATAVVLKEARQKL-SIPVIGVIDPGARAAVKVTRSKRIGVIGTKM 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + Q + +S VE + G ++E+
Sbjct: 119 TIESNSYEKALRHVEGQVVVESLSCPPFVPLVE-------------SSQTSGPYVERVVA 165
Query: 191 RT---------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
T D ++L CTHYPL+ V ++ V + + D A LL
Sbjct: 166 NTLKPLLSYDMDTLILGCTHYPLLAEVIGRVIGPNVQLISSGDETALEVSALL 218
>gi|325963803|ref|YP_004241709.1| glutamate racemase [Arthrobacter phenanthrenivorans Sphe3]
gi|323469890|gb|ADX73575.1| glutamate racemase [Arthrobacter phenanthrenivorans Sphe3]
Length = 332
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 42/249 (16%)
Query: 3 IDNYPCEKKLQNS------ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56
I P LQ + I +FDSG+GGL V + + +P +YV D PYG
Sbjct: 7 IAAAPATGGLQAAAVESRPIGVFDSGVGGLTVARSIIDQLPNESILYVGDTAHGPYGPLP 66
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIK 112
++ + + +++D +L+ IACN+A + + R + + + + PA++
Sbjct: 67 IAEVRANALGVMDELVDSGVKLLT-IACNSASAAVLRDARERYTAKYGIPVIEVIQPAVR 125
Query: 113 QAAAYTQSGLISILSTPATL-RRTY------------TSNLIHSYVSQCHIHLVSSMILA 159
+A A T+SG + ++ T AT+ R Y TS +VS + + L
Sbjct: 126 RAVAATRSGRVGVIGTSATIGSRAYEDTFAAAPDLAITSVACPEFVSYVEAGITTGPALL 185
Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ EEY +K D +VL CTHYPL+ V + V
Sbjct: 186 AVAEEYLAPLK------------------AAGVDTVVLGCTHYPLLTGVISYVMGADVTL 227
Query: 220 LDNSDSIAR 228
+ +++ A+
Sbjct: 228 VSSAEETAK 236
>gi|229169224|ref|ZP_04296938.1| Glutamate racemase [Bacillus cereus AH621]
gi|228614290|gb|EEK71401.1| Glutamate racemase [Bacillus cereus AH621]
Length = 270
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 3 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 63 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 121 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 174
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 175 KSTDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQ- 233
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 234 -SDHLFLTTGK 243
>gi|167628589|ref|YP_001679088.1| glutamate racemase, putative [Heliobacterium modesticaldum Ice1]
gi|167591329|gb|ABZ83077.1| glutamate racemase, putative [Heliobacterium modesticaldum Ice1]
Length = 284
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 11/224 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++ MP +Y AD PYG L R +D L
Sbjct: 7 IGIFDSGVGGLTVAREVFRQMPGEEILYFADTAHVPYGPRPASEL-IRFALEITDFLVAE 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L ++ACNT+ +L D +R P ++A +++G I +L+T AT+R+
Sbjct: 66 GAKLILVACNTSSSLALDIIRERHKVPVVGVVDPGAEEAVRLSRNGRIGVLATEATIRKG 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEKEGKRT 192
S + S + + VE + DE + K+ IE
Sbjct: 126 AHSRRVGELNSAMQVFGQACPRFVPLVESG----RYSGDEARAASKQYLAPLIEAG---V 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
D IVL CTHYP + V R++ + +D + + + L+ R
Sbjct: 179 DTIVLGCTHYPFLEPVIREVIGEKITLIDPACQTVAQGKALMER 222
>gi|229019709|ref|ZP_04176516.1| Glutamate racemase [Bacillus cereus AH1273]
gi|229027350|ref|ZP_04183605.1| Glutamate racemase [Bacillus cereus AH1272]
gi|228733958|gb|EEL84697.1| Glutamate racemase [Bacillus cereus AH1272]
gi|228741616|gb|EEL91809.1| Glutamate racemase [Bacillus cereus AH1273]
Length = 274
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 179 KSTDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 238 -SDHLFLTTGK 247
>gi|29349130|ref|NP_812633.1| glutamate racemase [Bacteroides thetaiotaomicron VPI-5482]
gi|29341037|gb|AAO78827.1| glutamate racemase [Bacteroides thetaiotaomicron VPI-5482]
Length = 280
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R +PEY ++Y+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILNKIREALPEYDYVYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P LG + P ++ TQS I +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGGITQSRHIGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ IH + ++ + VE + + I+K I+ +
Sbjct: 131 GTIKSESYPLEIHKLFPDIQVSGMACPMWVPLVENNESQNEGADYFIRKYIDQLL--SKD 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
D ++L CTHYP+++ ++ +P + + + +A + L R
Sbjct: 189 PEIDTMILGCTHYPILLPKIQEYTPKHIRIVAQGEYVAESLKDYLSR 235
>gi|253571293|ref|ZP_04848700.1| glutamate racemase [Bacteroides sp. 1_1_6]
gi|251839246|gb|EES67330.1| glutamate racemase [Bacteroides sp. 1_1_6]
Length = 280
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILNKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P LG + P ++ TQS I +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGDITQSRHIGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ IH + ++ + VE + + I+K I+ +
Sbjct: 131 GTIKSESYPLEIHKLFPDIQVSGIACPMWVPLVENNESQNEGADYFIRKYIDQLL--SKD 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
D ++L CTHYP+++ ++ +P + + + +A + L R
Sbjct: 189 PEIDTMILGCTHYPILLPKIQKYTPKHIRIVAQGEYVAESLKDYLSR 235
>gi|229013698|ref|ZP_04170827.1| Glutamate racemase [Bacillus mycoides DSM 2048]
gi|228747620|gb|EEL97494.1| Glutamate racemase [Bacillus mycoides DSM 2048]
Length = 274
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 179 KSTDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQ- 237
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 238 -SDHLFLTTGK 247
>gi|255037214|ref|YP_003087835.1| glutamate racemase [Dyadobacter fermentans DSM 18053]
gi|254949970|gb|ACT94670.1| glutamate racemase [Dyadobacter fermentans DSM 18053]
Length = 269
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG+ V + L+P+ + IY D PYG+ A++ + + + +L +
Sbjct: 8 IGIFDSGIGGMTVASAVTKLLPQENTIYFGDTAHLPYGDKSTAAIQAYSIKICNMLLQQ- 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV--PAIKQAAAYTQSGLISILSTPATLR 133
L +IACN+A + +R S A + V P + + + I ++ T T+
Sbjct: 67 NCKLILIACNSASAAAYELVREYVGSKAKVLNVIDPVVDYVKEHYEGKTIGLIGTKQTVL 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + H+ +++ +LA +EE I E I + ++ +
Sbjct: 127 SNVYKKKVDALDRNIHLKSLATPLLAPMIEEGFFDNNISESVIANYLSDASLDG----IE 182
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++L CTHYPLI R+ ++ LD S+ +AR + L +
Sbjct: 183 ALILGCTHYPLIKTQIRKFYGEAIETLDTSEIVARSLKAWLEQ 225
>gi|312135723|ref|YP_004003061.1| glutamate racemase [Caldicellulosiruptor owensensis OL]
gi|311775774|gb|ADQ05261.1| glutamate racemase [Caldicellulosiruptor owensensis OL]
Length = 267
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K
Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+
Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDIPIVAVIE--PGAEAAVRATKNKKIGVIGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191
I S + + VEE G KE + KE FIEKE
Sbjct: 123 SGSFEKKILELDSSIKVFSKPCPLFVPLVEE---GWTDKEVTYLVAKEYLEEFIEKE--- 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
D +VL CTHYP + V +++ P
Sbjct: 177 IDTLVLGCTHYPFLQDVIKKVLP 199
>gi|229062177|ref|ZP_04199501.1| Glutamate racemase [Bacillus cereus AH603]
gi|228717160|gb|EEL68836.1| Glutamate racemase [Bacillus cereus AH603]
Length = 274
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 178
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 179 KSTDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNDGEEQ- 237
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 238 -SDHLFLTTGK 247
>gi|171780258|ref|ZP_02921162.1| hypothetical protein STRINF_02046 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281606|gb|EDT47041.1| hypothetical protein STRINF_02046 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 269
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 18/255 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ V ACNTA + E++ + LG + P A T++G
Sbjct: 53 YTWELVNFLLTKNVKMI-VFACNTATAVAWKEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I I+ TP T+ I S + + ++ VE G + KK +
Sbjct: 111 KIGIIGTPMTINSEVYPEKIKSLSPKMEVSGLACSKFVPIVESNEMGSSVA----KKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 ESLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINH 225
Query: 240 HQTRVFDDHALFLSG 254
+T DH + +
Sbjct: 226 SRTENAVDHHFYTTA 240
>gi|297620368|ref|YP_003708505.1| Glutamate racemase [Waddlia chondrophila WSU 86-1044]
gi|297375669|gb|ADI37499.1| Glutamate racemase [Waddlia chondrophila WSU 86-1044]
Length = 276
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 6/221 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N+I +FDSG+GGL V++ + +P+ IY D PYG + + + + +L
Sbjct: 2 NAIAVFDSGLGGLTVVKALCEHLPQEEIIYFGDTARVPYGGKSRETVIRYAREISAFLLS 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VI CNTA D L + F P I++ +A Q+ I++L T AT+R
Sbjct: 62 QEIKAL-VIGCNTASAYAADLLAAELELPVFNVIDPLIEEISA-CQAEHIAVLGTAATVR 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + +S + VEE+ + +E + +R D
Sbjct: 120 SGIYQARLAQKIPNVKVTGISCPLFVPIVEEHF----QNHPAARLIVEEYLFRVKDERMD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTHYPL+ + R+ V +D++ + A++ + L
Sbjct: 176 TVVLGCTHYPLLYCLIREYLGDEVRIVDSASACAKQIQAAL 216
>gi|153815937|ref|ZP_01968605.1| hypothetical protein RUMTOR_02182 [Ruminococcus torques ATCC 27756]
gi|145846756|gb|EDK23674.1| hypothetical protein RUMTOR_02182 [Ruminococcus torques ATCC 27756]
Length = 279
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD----ILD 73
+FDSG+GGL V +++ +P + +Y D PYG+ + + + FS+ L
Sbjct: 17 VFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTIIR-----FSEQIIRFLK 71
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Q VIACNTA L D +R F P M + +P + A T++ + ++ T AT
Sbjct: 72 TKQVKAIVIACNTASALALDAVRDEFDIPIMGVV--IPGARAAVETTRNQKVGVIGTDAT 129
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190
++ + +I S + + + VEE KE + +E+ ++E
Sbjct: 130 VQSGMYTKVIQSMAPDIEVIEKACPLFVPLVEE-----GFKEHVVTEEVIEYYLESMRHT 184
Query: 191 RTDVIVLACTHYPLI 205
+ D ++L CTHYPL+
Sbjct: 185 QIDAMILGCTHYPLL 199
>gi|309805303|ref|ZP_07699354.1| glutamate racemase [Lactobacillus iners LactinV 09V1-c]
gi|312875202|ref|ZP_07735215.1| glutamate racemase [Lactobacillus iners LEAF 2053A-b]
gi|308165379|gb|EFO67611.1| glutamate racemase [Lactobacillus iners LactinV 09V1-c]
gi|311089309|gb|EFQ47740.1| glutamate racemase [Lactobacillus iners LEAF 2053A-b]
Length = 261
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 29/261 (11%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW--EDHAL 60
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119
R F +L K V+ + CNTA ++ P M +G + + AA+ TQ
Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK---EDEI 176
+ +++++T AT+ HSYV + I ++ I + + E ++ DEI
Sbjct: 109 TNQVAVIATNATVNS-------HSYVKE--IAFRNAQIQVTELGEPKLAPLVEANPSDEI 159
Query: 177 KKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
KK + C + + D ++L CTHYPL++ + +D +D +A+ +L
Sbjct: 160 KKAVVAQCLAPLKHVQYDTLILGCTHYPLLIREIAEFIGKDKKIVDPADQVAQYTFNVLK 219
Query: 236 RINTHQTRVFDDHALFLSGKP 256
R N + H + +G P
Sbjct: 220 RDNLLAAK-GGKHEYYTTGDP 239
>gi|34496658|ref|NP_900873.1| glutamate racemase [Chromobacterium violaceum ATCC 12472]
gi|34102513|gb|AAQ58878.1| glutamate racemase [Chromobacterium violaceum ATCC 12472]
Length = 256
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 6/219 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
++DSG+GGL V + +R +P++ Y+AD PYG + R + + ++ +
Sbjct: 1 MYDSGLGGLSVWRAVRAALPDWPITYLADQAYCPYGPRSREEIIARALKVGHYLVSQGAT 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+L V I S+ +G PAIK AAA +++G I++L+T TL
Sbjct: 61 LLVVACNTATTAAIAALRAEL--SLPIVGIEPAIKPAAAMSRTGRIAVLATEYTLASERV 118
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ + + + +VE + ++K +E E D I L
Sbjct: 119 KTLLDDHAGDVDVLRRAGHGWVEQVEAGELSSERTRALVRKVVEPLIDEN----IDHIAL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
CTHYP + + R+++ + D +++IARR LL R
Sbjct: 175 GCTHYPFLAPLIREVTGDGIQLYDPAEAIARRVCDLLRR 213
>gi|297195902|ref|ZP_06913300.1| glutamate racemase [Streptomyces pristinaespiralis ATCC 25486]
gi|297152990|gb|EFH32086.1| glutamate racemase [Streptomyces pristinaespiralis ATCC 25486]
Length = 270
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + R + + +
Sbjct: 12 IALMDSGIGLLAAAAVVRTLRPDADLVLSSDPGSMPWGPRTPDDVAGRALTVAR-AAAAH 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ PS+ +G VPAIK AAA G ++I +TPAT
Sbjct: 71 KPDALIVACNTASVHALPALRAELEPSIPVIGTVPAIKPAAA--GGGPVAIWATPATTGS 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE + +D I + + +
Sbjct: 129 PYQRGLIKEFAGSVEVTEVPCPGLADAVE------RADKDAIDRAVAAAAALTP-RDVRA 181
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 182 VVLGCTHYELVSERIR 197
>gi|331089823|ref|ZP_08338716.1| glutamate racemase [Lachnospiraceae bacterium 3_1_46FAA]
gi|330403520|gb|EGG83078.1| glutamate racemase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 275
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD----ILD 73
+FDSG+GGL V +++ +P + +Y D PYG+ + + + FS+ L
Sbjct: 13 VFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTIIR-----FSEQIIRFLK 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
Q VIACNTA L D +R F + +G V P + A T++ + ++ T AT+
Sbjct: 68 TKQVKAIVIACNTASALALDAVRDEF-DIPIMGVVIPGARAAVETTRNQKVGVIGTDATV 126
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191
+ + +I S + + + VEE KE + +E+ ++E +
Sbjct: 127 QSGMYTKVIQSMAPDIEVIEKACPLFVPLVEE-----GFKEHVVTEEVIEYYLESMRHTQ 181
Query: 192 TDVIVLACTHYPLI 205
D ++L CTHYPL+
Sbjct: 182 IDAMILGCTHYPLL 195
>gi|317500702|ref|ZP_07958920.1| glutamate racemase [Lachnospiraceae bacterium 8_1_57FAA]
gi|316897896|gb|EFV19949.1| glutamate racemase [Lachnospiraceae bacterium 8_1_57FAA]
Length = 273
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD----ILD 73
+FDSG+GGL V +++ +P + +Y D PYG+ + + + FS+ L
Sbjct: 11 VFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTIIR-----FSEQIIRFLK 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
Q VIACNTA L D +R F + +G V P + A T++ + ++ T AT+
Sbjct: 66 TKQVKAIVIACNTASALALDAVRDEF-DIPIMGVVIPGARAAVETTRNQKVGVIGTDATV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191
+ + +I S + + + VEE KE + +E+ ++E +
Sbjct: 125 QSGMYTKVIQSMAPDIEVIEKACPLFVPLVEE-----GFKEHVVTEEVIEYYLESMRHTQ 179
Query: 192 TDVIVLACTHYPLI 205
D ++L CTHYPL+
Sbjct: 180 IDAMILGCTHYPLL 193
>gi|309802168|ref|ZP_07696277.1| glutamate racemase [Bifidobacterium dentium JCVIHMP022]
gi|308221248|gb|EFO77551.1| glutamate racemase [Bifidobacterium dentium JCVIHMP022]
Length = 258
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 7/221 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++R MP +Y D PYG ++ L F + +
Sbjct: 7 IGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTRTPKQVRD-LSFAIVERFVQQ 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133
VIACNTA + D LR + + +G PA+K A Q + + +TP TLR
Sbjct: 66 GAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLTLR 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ + S H + VE G D + + + F + D
Sbjct: 125 ERKFAVLMDRFKSD---HTIFPQPCPGLVEIVEQGRLDDHDLVMRTLHDYFDRYDLSTID 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+ FR+L P +D + R +L
Sbjct: 182 SVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVL 222
>gi|74317540|ref|YP_315280.1| glutamate racemase [Thiobacillus denitrificans ATCC 25259]
gi|74057035|gb|AAZ97475.1| glutamate racemase [Thiobacillus denitrificans ATCC 25259]
Length = 265
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 10/223 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSGIGGL V++ + +P + +Y D PYG + + +L
Sbjct: 6 HSPIGVFDSGIGGLTVVRALMERLPYENIVYFGDTARVPYGVKSVETIAHFTTQIAQFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPAT 131
+K +L VIACNT + ++ P + + I AA + G I ++ TP T
Sbjct: 66 EKDVKLL-VIACNTMAAVAAQVVKDLSP----VPVLDVIDAGAASARGGKKIGVIGTPTT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH Y IH + + VEE ++ + ++ E
Sbjct: 121 INSNAYARAIHDYAPDSRIHSQACPLFVPLVEEGWLDNEVTRLTAQDYMKPLLAE----H 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYPL+ + R++ V +D+++++A + +L
Sbjct: 177 IDTLVLGCTHYPLLKPLLREVVGDGVALVDSAEAMAEQVAAVL 219
>gi|331086725|ref|ZP_08335802.1| glutamate racemase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330409891|gb|EGG89326.1| glutamate racemase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 278
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKI+N K I +FDSG+GGL V +++ +P +Y D PYG+ + +
Sbjct: 1 MKIEN-----KKDMPIGVFDSGVGGLTVAREIMRQLPNESIVYFGDTARVPYGSKSETTI 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + +L K + VIACNTA L D +R F + +G V P + A T
Sbjct: 56 IRYSRQIIRFLLTKEVKAI-VIACNTASALALDAVRKEF-KIPIIGVVAPGARAAREETI 113
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I ++ T AT++ LI + Q + + + VEE KI ++
Sbjct: 114 NKKIGVIGTEATVKSEIYKKLIQAEDPQISVSGRACPLFVPLVEEGFAKHKI----TREV 169
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
I+ + D ++L CTHYPL+ R+
Sbjct: 170 IDIYLSDMRESDIDTLILGCTHYPLLRSTIRE 201
>gi|306822342|ref|ZP_07455721.1| glutamate racemase [Bifidobacterium dentium ATCC 27679]
gi|304554340|gb|EFM42248.1| glutamate racemase [Bifidobacterium dentium ATCC 27679]
Length = 262
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 7/221 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++R MP +Y D PYG ++ L F + +
Sbjct: 11 IGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTRTPKQVRD-LSFAIVERFVQQ 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133
VIACNTA + D LR + + +G PA+K A Q + + +TP TLR
Sbjct: 70 GAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLTLR 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ + S H + VE G D + + + F + D
Sbjct: 129 ERKFAVLMDRFKSD---HTIFPQPCPGLVEIVEQGRLDDHDLVMRTLHDYFDRYDLSTID 185
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+ FR+L P +D + R +L
Sbjct: 186 SVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVL 226
>gi|170782455|ref|YP_001710788.1| glutamate racemase [Clavibacter michiganensis subsp. sepedonicus]
gi|169157024|emb|CAQ02197.1| glutamate racemase 1 [Clavibacter michiganensis subsp. sepedonicus]
Length = 294
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + L+P IY+ D PYG+ +++ + + D++++
Sbjct: 6 IGIFDSGVGGLTVARAVAALLPRESIIYIGDTAHTPYGDKPIADVRRYALAVLDDLVERG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134
+L VIACNTA + + R + PA++ A + T++ + +++T AT+ R
Sbjct: 66 VKML-VIACNTASAAMLRDARERYDIPVVEVIQPAVRTAVSVTRNHRVGVIATHATVTSR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEKEGKR 191
Y ++ + H+ L S + ++ ++ E E+ EG
Sbjct: 125 AYDD----AFAAAPHLALTS-----AEAPDFVGFVERGETSGPELMSAAEGYLAPLRAAG 175
Query: 192 TDVIVLACTHYPLI 205
D +VL CTHYP +
Sbjct: 176 VDTLVLGCTHYPFL 189
>gi|225872661|ref|YP_002754118.1| glutamate racemase [Acidobacterium capsulatum ATCC 51196]
gi|225792605|gb|ACO32695.1| glutamate racemase [Acidobacterium capsulatum ATCC 51196]
Length = 276
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+ + +P+ F+Y D PYG + R ++ L +
Sbjct: 11 IGVFDSGFGGLTVLRALLRELPQAEFLYFGDTARLPYGAKSRETI-ARYAVSAAEFLVRQ 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRR 134
VIACNTA L D+LR+ + LG V AA A++ SG + +++T AT+
Sbjct: 70 GAEYLVIACNTASALALDDLRAAL-DIPVLGVVETGANAAQAHSHSGDVLVIATAATVES 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------EDEIKKEIEGCFIEK 187
H+Y + C + R E AC + + + + +E+ + +
Sbjct: 129 -------HAYATACAERNL-------RAVEKACPLLVPLVEEGWIDHPVTREVLSIYFTE 174
Query: 188 EGKRT-------DVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
++ D ++L CTHYPL+ Q P + +D+
Sbjct: 175 LMHQSKAAALAPDTLLLGCTHYPLLREPIEQAIPAQIRVIDS 216
>gi|328946845|gb|EGG40982.1| glutamate racemase [Streptococcus sanguinis SK1087]
Length = 264
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + K++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|324993660|gb|EGC25579.1| glutamate racemase [Streptococcus sanguinis SK405]
gi|324995028|gb|EGC26941.1| glutamate racemase [Streptococcus sanguinis SK678]
gi|327462929|gb|EGF09250.1| glutamate racemase [Streptococcus sanguinis SK1]
gi|327474533|gb|EGF19938.1| glutamate racemase [Streptococcus sanguinis SK408]
gi|332359127|gb|EGJ36948.1| glutamate racemase [Streptococcus sanguinis SK49]
gi|332362249|gb|EGJ40049.1| glutamate racemase [Streptococcus sanguinis SK1056]
Length = 264
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + K++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|125974438|ref|YP_001038348.1| glutamate racemase [Clostridium thermocellum ATCC 27405]
gi|256005209|ref|ZP_05430177.1| glutamate racemase [Clostridium thermocellum DSM 2360]
gi|281418963|ref|ZP_06249981.1| glutamate racemase [Clostridium thermocellum JW20]
gi|125714663|gb|ABN53155.1| glutamate racemase [Clostridium thermocellum ATCC 27405]
gi|255990863|gb|EEU00977.1| glutamate racemase [Clostridium thermocellum DSM 2360]
gi|281407420|gb|EFB37680.1| glutamate racemase [Clostridium thermocellum JW20]
gi|316941574|gb|ADU75608.1| glutamate racemase [Clostridium thermocellum DSM 1313]
Length = 268
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 113/244 (46%), Gaps = 23/244 (9%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSG+GGL VL++++ L+P +Y D PYG+ + K
Sbjct: 1 MDNRP--------IGVFDSGLGGLTVLKEIKNLLPRESIVYFGDSGRAPYGSKSKETVVK 52
Query: 63 RLMFLFSDI--LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYT 118
+ F DI L + VIACNTA D+++++F P + +G P A T
Sbjct: 53 ---YTFQDIRFLLNQDIKMIVIACNTASACSLDQVKNSFDIPIVEVVG--PGAATAVRET 107
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+ + ++ T AT+ I + I+ + + VEE E++I
Sbjct: 108 VNKKVGVIGTVATVSSGVYEKAILKLDPEIEIYQKACPLFVPLVEEGWW-----ENDIAL 162
Query: 179 EI-EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
I E + + K D +VL CTHYPL+ + ++ V + ++ +A+ + ++ +
Sbjct: 163 RIAEEYLLPLKEKNIDTLVLGCTHYPLLYNTISKVMGDGVKLVSSALEVAKVVKEMIEKS 222
Query: 238 NTHQ 241
N ++
Sbjct: 223 NLNR 226
>gi|163781564|ref|ZP_02176564.1| glutamate racemase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882784|gb|EDP76288.1| glutamate racemase [Hydrogenivirga sp. 128-5-R1-1]
Length = 255
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 15/220 (6%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+ +R P Y+ D PYG + + + + +K
Sbjct: 5 VFDSGVGGLTVLKAIREKFPRIDLFYLGDTARVPYGTKSPDTVIRYSVECAEFLSEKSVD 64
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
VL V+ACNTA + + L S ++ LG V P +++A + T+ G + ++ T AT+R
Sbjct: 65 VL-VVACNTASSYALETLTSML-TIPVLGVVEPGVRKALSLTK-GRVGVIGTSATIR--- 118
Query: 137 TSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
S + + + + S + VEE G+ ++ D ++ +E E K D
Sbjct: 119 -SEAYQHRLREAGVEVFSKACPLFVPLVEE---GL-VEGDITERVVEFYLKEFREKGIDT 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++L CTHYPL+ + + + +D+SD++A L+
Sbjct: 174 LILGCTHYPLLKNTIKNFLKG-TEVVDSSDAVAEELSSLV 212
>gi|291550542|emb|CBL26804.1| glutamate racemase [Ruminococcus torques L2-14]
Length = 273
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V +++ +P + +Y D PYG+ + + + FS+ + ++
Sbjct: 9 IGVFDSGVGGLTVAREISRQLPYENIVYFGDTARVPYGSKSQNTIIR-----FSEQIIRF 63
Query: 76 ----QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
Q VIACNTA L D ++ F + +G V P + A T +G + ++ T A
Sbjct: 64 LRTKQVKAIVIACNTASALALDAVKDEF-DLPIIGVVIPGARAAVEATTNGKVGVVGTEA 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189
T++ + +I + + + + VEE KE + +EI ++E
Sbjct: 123 TVQSGMYTKVIQGMNPKIEVIEKACPLFVPLVEE-----GFKEHIVTREIIEYYLESMRN 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQ 211
D ++L CTHYPL+ R+
Sbjct: 178 TDIDAMILGCTHYPLLRSKIRE 199
>gi|167760730|ref|ZP_02432857.1| hypothetical protein CLOSCI_03115 [Clostridium scindens ATCC 35704]
gi|167661617|gb|EDS05747.1| hypothetical protein CLOSCI_03115 [Clostridium scindens ATCC 35704]
Length = 281
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 9 EKKLQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALK-KRL 64
E +N+ + +FDSG+GGL V +++ +P + +Y D PYG+ D+ ++ R
Sbjct: 10 ENNRENTAPVGVFDSGVGGLTVAREIMRQLPMENVVYFGDTARVPYGSKSRDNIIRFSRQ 69
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGL 122
+ F L+ VIACNTA L D ++ + P + +G P + A T++G
Sbjct: 70 IIRF---LETKNVKAIVIACNTASALALDTVQKETDVPVIGVIG--PGARAAVKETRNGQ 124
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I ++ T AT++ + +IHS + + + VEE KI E+ I +
Sbjct: 125 IGVVGTEATIQSETYTKVIHSLNPEASVIGKPCPLFVPLVEEGFAKHKITEEAIDFYLS- 183
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
+ + + D ++L CTHYPL+
Sbjct: 184 ---DMKSTQIDTMILGCTHYPLL 203
>gi|283456482|ref|YP_003361046.1| glutamate racemase [Bifidobacterium dentium Bd1]
gi|283103116|gb|ADB10222.1| MurI Glutamate racemase [Bifidobacterium dentium Bd1]
Length = 258
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 7/221 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++R MP +Y D PYG ++ L F + +
Sbjct: 7 IGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTKTPKQVRD-LSFAIVERFVQQ 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133
VIACNTA + D LR + + +G PA+K A Q + + +TP TLR
Sbjct: 66 GAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLTLR 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ + S H + VE G D + + + F + D
Sbjct: 125 ERKFAVLMDRFKSD---HTIFPQPCPGLVEIVEQGRLDDHDLVMRTLHDYFDRYDLSTID 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+ FR+L P +D + R +L
Sbjct: 182 SVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVL 222
>gi|171742432|ref|ZP_02918239.1| hypothetical protein BIFDEN_01543 [Bifidobacterium dentium ATCC
27678]
gi|171278046|gb|EDT45707.1| hypothetical protein BIFDEN_01543 [Bifidobacterium dentium ATCC
27678]
Length = 262
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 7/221 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++R MP +Y D PYG ++ L F + +
Sbjct: 11 IGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTKTPKQVRD-LSFAIVERFVQQ 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133
VIACNTA + D LR + + +G PA+K A Q + + +TP TLR
Sbjct: 70 GAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLTLR 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ + S H + VE G D + + + F + D
Sbjct: 129 ERKFAVLMDRFKSD---HTIFPQPCPGLVEIVEQGRLDDHDLVMRTLHDYFDRYDLSTID 185
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+ FR+L P +D + R +L
Sbjct: 186 SVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVL 226
>gi|294789006|ref|ZP_06754246.1| glutamate racemase [Simonsiella muelleri ATCC 29453]
gi|294483108|gb|EFG30795.1| glutamate racemase [Simonsiella muelleri ATCC 29453]
Length = 272
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 12/248 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V++ + +P + +Y D PYG + +++ + +L
Sbjct: 9 EKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTIEEFTAQIVEFLL 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
L VIACNT + ++ +M + + A QAA A T++ I +++T T
Sbjct: 69 QNEVKAL-VIACNTIAAVAYKRVQQMVGNMPIISVIEAGAQAALATTRNNHIGVIATSTT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH+ I +S IL VEE ++ +++ ++ E
Sbjct: 128 VNSNAYARAIHAQNPDTRILSQASPILVPLVEEGWLDHEVTRLTVREYLKPILAED---- 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR-RARCLLPR--INTHQTRVFDDH 248
D +VL CTHYPL+ + ++ ++ +D+S + A A+ LL +NT Q D+
Sbjct: 184 VDTLVLGCTHYPLLKPLIKK-EANTLELVDSSITTAEATAQALLDAHLLNTSQQ--MPDY 240
Query: 249 ALFLSGKP 256
++S P
Sbjct: 241 RFYVSDIP 248
>gi|163840216|ref|YP_001624621.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
gi|162953692|gb|ABY23207.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
Length = 306
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 12/223 (5%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + IFDSG+GGL V + + +P YV D PYG ++ + + +
Sbjct: 8 QAQAPLGIFDSGVGGLTVARSVIDQLPNESIFYVGDTANAPYGPLPIAEVRANALGVMDE 67
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISIL 126
++D +L VIACN+A + + R + + V PA+++A A T++G I ++
Sbjct: 68 LVDSGVKLL-VIACNSATAAVLPDARERYTLRHGIPVVEVIRPAVRRAVAATRNGRIGVI 126
Query: 127 STPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
T AT+ R Y + + Q V+S VE GI E+ E
Sbjct: 127 GTEATIGSRAYEDSFAVASDLQ-----VTSAACPKFVEFVELGITAGP-ELLNTAEEYLA 180
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ D +VL CTHYPL+ V + V + +++ A+
Sbjct: 181 PLKAAGVDTLVLGCTHYPLLTGVISYVMGDGVTLVSSAEETAK 223
>gi|324991303|gb|EGC23236.1| glutamate racemase [Streptococcus sanguinis SK353]
gi|325687120|gb|EGD29143.1| glutamate racemase [Streptococcus sanguinis SK72]
Length = 264
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + K++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|228954765|ref|ZP_04116787.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228804963|gb|EEM51560.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 269
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG + +R + ++
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEV-RRFTWEMTE 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 61 HLLNLNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 174 KSTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 233 -SDHLFLTTGK 242
>gi|125718584|ref|YP_001035717.1| glutamate racemase [Streptococcus sanguinis SK36]
gi|166231063|sp|A3CPR2|MURI_STRSV RecName: Full=Glutamate racemase
gi|125498501|gb|ABN45167.1| Glutamate racemase, putative [Streptococcus sanguinis SK36]
Length = 264
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + K++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|312898722|ref|ZP_07758111.1| glutamate racemase [Megasphaera micronuciformis F0359]
gi|310620153|gb|EFQ03724.1| glutamate racemase [Megasphaera micronuciformis F0359]
Length = 270
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 20/233 (8%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GGL V+ K+R L+P IYV D PYG + + L F
Sbjct: 6 KAEQPIGVFDSGVGGLTVVNKLRHLLPHEDIIYVGDTKRNPYGTRTQNEI---LTFTEQI 62
Query: 71 I--LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I L++ Q L V ACNTA + ++R ++ LG I+ A + I++ +T
Sbjct: 63 IAFLERRQVKLIVFACNTATAVAYMKMREKTKTL-LLGMSRGIETARHISTENRIAVFAT 121
Query: 129 PATLRRTYTSNLIH-SYVSQCHIHLV----SSMILASRVEEYACGIKIKEDEIKKEIEGC 183
P T+ +N +H +Q L LA+ +E ++ +E+++ +
Sbjct: 122 PLTI-----ANHVHRDEAAQLDPSLTIVEQPCASLAALIERG----QLNTEEMRQAVTAD 172
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
D + CTHYP + +F ++ + ++D + A +A +L +
Sbjct: 173 TKPVLEAHVDTAIFGCTHYPFVQPLFEEICGDSIVFVDPAHETALQASAILKK 225
>gi|302872434|ref|YP_003841070.1| glutamate racemase [Caldicellulosiruptor obsidiansis OB47]
gi|302575293|gb|ADL43084.1| glutamate racemase [Caldicellulosiruptor obsidiansis OB47]
Length = 267
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++ LMP + +Y D PYG+ + K M +L K
Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNENIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ V+ACNTA + L+ +F P +A + P K A T++ + ++ T T+
Sbjct: 66 VKIV-VVACNTASAYAYETLKKSFDIPIVAVIE--PGAKAAVNATKNKRVGVVGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191
I S + + VEE G KE + KE F EKE
Sbjct: 123 SGSFEKKILELDSSIKVFSKPCPLFVPLVEE---GWTDKEVTYLVAKEYLEEFSEKE--- 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
D +VL CTHYP + V +++ P
Sbjct: 177 IDTLVLGCTHYPFLQDVIKKVLP 199
>gi|255767654|ref|NP_390717.2| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|251757300|sp|P94556|MURI1_BACSU RecName: Full=Glutamate racemase 1
gi|225185282|emb|CAB14799.2| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
Length = 272
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T
Sbjct: 62 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE K ++ +K +
Sbjct: 121 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKT----SLYPLKDT 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH
Sbjct: 177 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 236
Query: 250 LFLSGKPD 257
+G D
Sbjct: 237 FLTTGARD 244
>gi|329116659|ref|ZP_08245376.1| glutamate racemase [Streptococcus parauberis NCFD 2020]
gi|326907064|gb|EGE53978.1| glutamate racemase [Streptococcus parauberis NCFD 2020]
Length = 264
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 34/263 (12%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++R +P + +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELRRQLPHENIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ V ACNTA + +E++ S+ LG + P A T +
Sbjct: 53 FTWDLVNFLLTKDVKMI-VFACNTATAVAWEEVKEAL-SIPVLGVILPGSSAAIKSTTNR 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKE 173
+ ++ TP T + S + Q I L++ M+ V AC +IK
Sbjct: 111 KVGVIGTPMT---------VSSNIYQEKIQLLAPML---SVISLACPKFVPIVESNEIKS 158
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
KK + GK D +VL CTHYPL+ + + + V +D+ R L
Sbjct: 159 SVAKKVVYDTLSPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPGVKLIDSGAECVRDISVL 217
Query: 234 LP--RINTHQTRVFDDHALFLSG 254
L +IN + + +H + +
Sbjct: 218 LNYFQINANPKEIEKNHRFYTTA 240
>gi|325695051|gb|EGD36954.1| glutamate racemase [Streptococcus sanguinis SK150]
gi|325696351|gb|EGD38242.1| glutamate racemase [Streptococcus sanguinis SK160]
Length = 264
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRS 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + K++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMKVESLACPKFVPLVESNEL-----HSSLTKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|261337748|ref|ZP_05965632.1| glutamate racemase [Bifidobacterium gallicum DSM 20093]
gi|270277201|gb|EFA23055.1| glutamate racemase [Bifidobacterium gallicum DSM 20093]
Length = 258
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 7/221 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V++++R +P H +Y D PYG +++ L F D +
Sbjct: 7 IGVFDSGLGGLSVVRQIREDLPNEHVLYFGDSAHAPYGVKTPDEVRE-LSFGIVDNFVRQ 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATLR 133
VIACNTA + +ELR T+ + +G PA+K A Q +I+ +T TLR
Sbjct: 66 GAKAIVIACNTATSAAVNELRDTY-DVPIIGMEPALKVAVDRGQGQRQNIIVAATELTLR 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ + + IH + L VE G + + + + D
Sbjct: 125 ERKFEQLMQRFEADHTIHRLPCPDLVEIVEH---GQLDDTALVDATLRRYLHDYDLDTID 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
IVL CTH+ F+++ P +D + A R +L
Sbjct: 182 AIVLGCTHFVFYRDAFQRIVPEHTAIIDGNAGTAHHLRVVL 222
>gi|332830408|gb|EGK03036.1| glutamate racemase [Dysgonomonas gadei ATCC BAA-286]
Length = 275
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 17/231 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG GGL +L +++ LMPEY + Y+ D+ PYG+ + K+ ++ LF
Sbjct: 7 IGVFDSGYGGLTILSEIQSLMPEYDYCYLGDNSRAPYGSRSFDVVYEFTKQAVLSLFDMG 66
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
+ L ++ACNTA T+ + +L P LG + P + TQS + I
Sbjct: 67 CN-----LVILACNTASAKALRTIQQKDLPHIDPDKRVLGVIRPTAEIIGPITQSRHVGI 121
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L T T++ S I+ + + + VE + + IKK + I
Sbjct: 122 LGTTGTIQSESYSIEINKLFPDIKVSGEACPMWVPLVENREYENEGADYFIKKNLSN--I 179
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ + D ++L CTHYP++++ + P V + + IAR + L R
Sbjct: 180 LSKDPQIDTLILGCTHYPILLNKIKSFLPDGVTAIAQGEYIARSLQDYLHR 230
>gi|270295594|ref|ZP_06201795.1| glutamate racemase [Bacteroides sp. D20]
gi|270274841|gb|EFA20702.1| glutamate racemase [Bacteroides sp. D20]
Length = 279
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 9/218 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL +L K+R ++P+Y +IY+ D+ PYG + + + + + +
Sbjct: 12 IGIFDSGYGGLTILSKIREVLPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA + ++L P LG + P ++ TQS + +L+T
Sbjct: 71 GCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H + + + S VE + + I+K I G + K+
Sbjct: 131 GTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNI-GNLLAKD- 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ D ++L CTH+PL++ +Q P + + + +A
Sbjct: 189 TQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVA 226
>gi|83753859|pdb|1ZUW|A Chain A, Crystal Structure Of B.Subtilis Glutamate Racemase (Race)
With D-Glu
gi|83753860|pdb|1ZUW|B Chain B, Crystal Structure Of B.Subtilis Glutamate Racemase (Race)
With D-Glu
gi|83753861|pdb|1ZUW|C Chain C, Crystal Structure Of B.Subtilis Glutamate Racemase (Race)
With D-Glu
gi|1770057|emb|CAA99552.1| glutamate racemase [Bacillus subtilis]
Length = 272
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T
Sbjct: 62 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE + DEI K +
Sbjct: 121 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKF-LDQTADEIVKT---SLYPLKDT 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH
Sbjct: 177 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 236
Query: 250 LFLSGKPD 257
+G D
Sbjct: 237 FLTTGARD 244
>gi|327403118|ref|YP_004343956.1| glutamate racemase [Fluviicola taffensis DSM 16823]
gi|327318626|gb|AEA43118.1| glutamate racemase [Fluviicola taffensis DSM 16823]
Length = 275
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 25/235 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+++R +PEY F+Y+ D+ PYG+ + + D+
Sbjct: 7 IGVFDSGYGGLTVLKEIREKLPEYDFLYLGDNARAPYGSRSFPVIYDYTWQAVQALFDR- 65
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA + + +L P LG + P+ ++ ++++ + +L+T
Sbjct: 66 DCSLVILACNTASAKALRNIQRIKLPELHPDKRVLGVIRPSTEELDKHSKTKHVGVLATD 125
Query: 130 ATLRRT--------YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
T+R + +L+ V+Q + +I ++ + I+ED ++
Sbjct: 126 GTIRSNSYQIELAKFAPDLV---VNQHACPMWVPLIENNKFDSPGGIYFIQEDLVQ---- 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+EK+ K D I+LACTHYP+++ + L P ++ L +A L R
Sbjct: 179 --LLEKDPK-IDTILLACTHYPILLDQIKGLLPEQIEVLPQGQIVANSLADYLDR 230
>gi|158520555|ref|YP_001528425.1| glutamate racemase [Desulfococcus oleovorans Hxd3]
gi|158509381|gb|ABW66348.1| glutamate racemase [Desulfococcus oleovorans Hxd3]
Length = 261
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 5/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + + Y +Y D PYG + K + +++L +
Sbjct: 2 IGIFDSGLGGLTVARAVMDELAGYDILYFGDTARTPYGAKSPETVIKYALE-NTELLLSH 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ ++ACNTA ++ + + + F F PA+ AA +++G I ++ T AT+
Sbjct: 61 GAKMVIMACNTASSVATEAVTARFDIPVFEVITPAVALAARLSKTGAIGVIGTRATINSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I +H + +L VEE +K+ E ++ + ++ D +
Sbjct: 121 IYEKKILEQRPGARVHSQACPLLVPLVEEG----WLKKPETAMIVKKYLHPLKTRQVDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+L CTHYP++ V +D+S ++AR + +
Sbjct: 177 ILGCTHYPILKKTIGHKIGRRVAIIDSSTAVARSVKAFI 215
>gi|325663116|ref|ZP_08151566.1| glutamate racemase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325470570|gb|EGC73800.1| glutamate racemase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 286
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 7/204 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E K I +FDSG+GGL V +++ +P +Y D PYG+ + + + +
Sbjct: 12 ENKKDMPIGVFDSGVGGLTVAREIMRQLPNESIVYFGDTARVPYGSKSETTIIRYSRQII 71
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+L K + VIACNTA L D +R F + +G V P + A T + I ++
Sbjct: 72 RFLLTKEVKAI-VIACNTASALALDAVRKEF-KIPIIGVVAPGARAAREETINKKIGVIG 129
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ LI + Q + + + VEE KI ++ I+ +
Sbjct: 130 TEATVKSEIYKKLIQAEDPQISVSGRACPLFVPLVEEGFAKHKI----TREVIDIYLSDM 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQ 211
D ++L CTHYPL+ R+
Sbjct: 186 RESDIDTLILGCTHYPLLRSTIRE 209
>gi|41408522|ref|NP_961358.1| glutamate racemase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|81571208|sp|Q73X85|MURI_MYCPA RecName: Full=Glutamate racemase
gi|41396878|gb|AAS04741.1| MurI [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 275
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL V + + +P+ H IYV D PYG ++ + + D++ +
Sbjct: 10 IFDSGVGGLTVARAIIDQLPDEHIIYVGDTGHGPYGPLSIPEVRAHALAIGDDLVGRGVK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACNTA + R + +PA+++A A T++G I ++ T AT+ ++
Sbjct: 70 AL-VIACNTASAACLRDARERYEVPVVEVILPAVRRAVATTRNGRIGVIGTQATI-NSHA 127
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ I V+ VE + ++ EG + + D +VL
Sbjct: 128 YQDAFAAARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVDTLVL 183
Query: 198 ACTHYPLI 205
CTHYPL+
Sbjct: 184 GCTHYPLL 191
>gi|253580902|ref|ZP_04858164.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847744|gb|EES75712.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 273
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKID + I +FDSG+GGL V +++ +P +Y D PYG+ +
Sbjct: 1 MKIDR-------EAPIGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKETI 53
Query: 61 KK--RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117
+ R + F L + Q V+ACNTA D +R F + +G + P K AAA
Sbjct: 54 IRYSRQIIRF---LQQQQVKAIVVACNTASAFALDAVRDEF-DIPIIGVIEPGAKVAAAQ 109
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T++ + I+ T T+ + + + + + + VEE D +
Sbjct: 110 TRNKRVGIIGTVGTVGSGIHAEYLKHLDPEITVFGKACPLFVPLVEEGWL-----HDPVT 164
Query: 178 KEIEGCFI-EKEGKRTDVIVLACTHYPLIVHVFRQL 212
E+ ++ E + K+ D ++L CTHYPL+ R++
Sbjct: 165 DEVAARYLKELQDKQVDTLILGCTHYPLLRSTIRKI 200
>gi|310780269|ref|YP_003968601.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
gi|309749592|gb|ADO84253.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
Length = 261
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM----FLFSDI 71
I +FDSG+GG+ V++++ ++PE IY D+ F Y N +++ M FL +
Sbjct: 4 IGVFDSGVGGITVVKEINKILPEDTIIYYGDNKNFHYENLSVDQIREHCMKIVEFLVLNG 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D V+AC+ A D L+S F + +G + K T + I I +TPA
Sbjct: 64 VDAV-----VVACSVATAAALDTLKSRFAHIPIVGVIDTGAKVGVEMTSNNSIGIFATPA 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + + L +E+ ++ DE+ KE ++ +
Sbjct: 119 TVAMDAYPKALRNINRKISVFQKGCPKLCYMIED-GWEDTLENDEVVKE----YLSYIPE 173
Query: 191 RTDVIVLACTHYPLIVHVFRQ 211
+TD ++L CTHYPLI HV +
Sbjct: 174 QTDTLLLGCTHYPLIRHVIAR 194
>gi|300780581|ref|ZP_07090436.1| glutamate racemase [Corynebacterium genitalium ATCC 33030]
gi|300533567|gb|EFK54627.1| glutamate racemase [Corynebacterium genitalium ATCC 33030]
Length = 284
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL V + + +P IY+ D PYG ++ M + D++++
Sbjct: 21 IGIFDSGFGGLTVARSVMDQLPGESVIYIGDGANGPYGPKPLAEVRGHAMAIADDLVERG 80
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ VIACNTA + R + PA+++A A T++G + ++ T AT+R
Sbjct: 81 CKMI-VIACNTASAAFLHDARERYSVPVIEVIKPAVRRAVATTRNGKVGVIGTQATIRSG 139
Query: 136 YTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
+L I + + C + V + + R ++ +G
Sbjct: 140 VYQDLFSLAPGIEATAAACPAFVEFVEAGVTHGR-------------QVLGVAQGYVEPL 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFR 210
+ D +VL CTHYPL+ V +
Sbjct: 187 QAAGVDTLVLGCTHYPLLSGVIQ 209
>gi|118465713|ref|YP_880790.1| glutamate racemase [Mycobacterium avium 104]
gi|254774375|ref|ZP_05215891.1| glutamate racemase [Mycobacterium avium subsp. avium ATCC 25291]
gi|166231040|sp|A0QD02|MURI_MYCA1 RecName: Full=Glutamate racemase
gi|118167000|gb|ABK67897.1| glutamate racemase [Mycobacterium avium 104]
Length = 275
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL V + + +P+ H IYV D PYG ++ + + D++ +
Sbjct: 10 IFDSGVGGLTVARAIIDQLPDEHIIYVGDTGHGPYGPLSIPEVRAHALAIGDDLVGRGVK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACNTA + R + +PA+++A A T++G I ++ T AT+ ++
Sbjct: 70 AL-VIACNTASAACLRDARERYEVPVVEVILPAVRRAVATTRNGRIGVIGTQATI-NSHA 127
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ I V+ VE + ++ EG + + D +VL
Sbjct: 128 YQDAFAAARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVDTLVL 183
Query: 198 ACTHYPLI 205
CTHYPL+
Sbjct: 184 GCTHYPLL 191
>gi|302562067|ref|ZP_07314409.1| glutamate racemase [Streptomyces griseoflavus Tu4000]
gi|302479685|gb|EFL42778.1| glutamate racemase [Streptomyces griseoflavus Tu4000]
Length = 264
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 81/196 (41%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + D G P+G L +R + + +
Sbjct: 3 IALMDSGIGLLAATAAVRRLRPDADLVLSLDPDGMPWGPRTPQDLTERALAVAE-AAAAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIVGCNTATVHALTALRARLEPGLPVIGTVPAIKPAAA--GGGPLAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +LI + + V LA VE ++ E
Sbjct: 120 PYQRDLIEDFAGGVAVTQVPCWGLAEAVER-------ADETAIDAAVAAAAELTPDEVTT 172
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 173 VVLGCTHYELVGERIR 188
>gi|253581900|ref|ZP_04859124.1| glutamate racemase [Fusobacterium varium ATCC 27725]
gi|251836249|gb|EES64786.1| glutamate racemase [Fusobacterium varium ATCC 27725]
Length = 263
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 8/192 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GG VL+ M ++P + IY AD PYG L + L F D K
Sbjct: 6 SIGVFDSGVGGTTVLKIMAEILPHENIIYYADSGNAPYGKKTVEEL-QSLCFNIMDFFLK 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ VIACNTA ++ + + +G + P K AA +++G I++L+TP T
Sbjct: 65 NRCKAVVIACNTATAAALTAIKERY-DIPVIGVINPGAKAAANMSKNGHIAVLATPFTAN 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ L + +EE + E + +I I + D
Sbjct: 124 SNAYGEEIKKISKKVSVYQEGCSELCTMIEE-----GWENFENRGDILDGHISQFPGSAD 178
Query: 194 VIVLACTHYPLI 205
+VL CTHYP+I
Sbjct: 179 TLVLGCTHYPII 190
>gi|148359847|ref|YP_001251054.1| glutamate racemase [Legionella pneumophila str. Corby]
gi|296107897|ref|YP_003619598.1| glutamate racemase [Legionella pneumophila 2300/99 Alcoy]
gi|148281620|gb|ABQ55708.1| glutamate racemase [Legionella pneumophila str. Corby]
gi|295649799|gb|ADG25646.1| glutamate racemase [Legionella pneumophila 2300/99 Alcoy]
Length = 272
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 8/214 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M + ++++
Sbjct: 8 AIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMAKILVER 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA T L+S + L P A + T++ I++L+T T+
Sbjct: 68 RIKAL-VIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLATETTIA 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+LI + + + + +L + EE + + +K ++ E D
Sbjct: 127 SRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE------D 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
++L CTH+P+ + L P V +D++ + A
Sbjct: 181 AVLLGCTHFPVFKPLLSSLLPKGVAIVDSAQATA 214
>gi|119961466|ref|YP_948293.1| glutamate racemase [Arthrobacter aurescens TC1]
gi|119948325|gb|ABM07236.1| glutamate racemase [Arthrobacter aurescens TC1]
Length = 373
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +YV D PYG ++ + + +++D
Sbjct: 59 IGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDELVDSG 118
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L+ IACN+A + + R + + + + PA+++A + T+SG I ++ T AT
Sbjct: 119 VKLLT-IACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVSATRSGKIGVIGTSAT 177
Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189
+ R Y + ++S+ + V GI D + E ++E +
Sbjct: 178 VGSRAYEDTF-----AAAPDLTITSVACPAFVNFVEAGITTGPDLLAAANE--YLEPLKS 230
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYPL+ V + V + +++ A+
Sbjct: 231 AGVDTVVLGCTHYPLLTGVISFVMGEDVTLVSSAEETAK 269
>gi|328880727|emb|CCA53966.1| Glutamate racemase [Streptomyces venezuelae ATCC 10712]
Length = 264
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 81/191 (42%), Gaps = 11/191 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + D G P+G L R + + + +
Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLLLSNDPDGMPWGPRTPEDLTGRALAVALAAAE-H 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA +R+ P +A +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPQALIVACNTATVHALPAIRAALEPDIAVIGTVPAIKPAAA--GGGKVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE + E +
Sbjct: 120 AYQRGLIRDFADGAEVTEVPCPGLADAVEH-------ADPEAVDRAVAAAAALTPRDVRT 172
Query: 195 IVLACTHYPLI 205
+VL CTHY L+
Sbjct: 173 VVLGCTHYELV 183
>gi|328953591|ref|YP_004370925.1| Glutamate racemase [Desulfobacca acetoxidans DSM 11109]
gi|328453915|gb|AEB09744.1| Glutamate racemase [Desulfobacca acetoxidans DSM 11109]
Length = 267
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 30/252 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL++ +P+Y ++Y+ D+ PYG D + K D L +
Sbjct: 2 IGVFDSGFGGLAVLREFLQALPDYDYLYLGDNARIPYGTRSDQVVLK-FTRQAVDYLFRQ 60
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+L ++AC+TA T+ + L +P+ LG V P +++A + T SG I I+ T
Sbjct: 61 GCILIILACHTASSKALRTIQQYYLPVHYPNNRVLGVVIPTVEEALSRTVSGRIGIIGTE 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIE 186
T+ SN S+ + H + +V + AC + I+ E E+ +
Sbjct: 121 GTV----ASN---SFPIELH-----KLNPGVQVFQQACPLLVPIIEAGEQDGEVADLMLN 168
Query: 187 K-----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRIN 238
K E R D ++L CTHY ++ + L + + + + A + L P IN
Sbjct: 169 KYLGPFEAHRIDTLILGCTHYSILKTKIKNLLGQKIQIICSGEVTAVKLADYLRRHPEIN 228
Query: 239 THQTRVFDDHAL 250
+R H L
Sbjct: 229 QRLSRTGQRHYL 240
>gi|296118692|ref|ZP_06837268.1| glutamate racemase [Corynebacterium ammoniagenes DSM 20306]
gi|295968181|gb|EFG81430.1| glutamate racemase [Corynebacterium ammoniagenes DSM 20306]
Length = 265
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 21/262 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ IYV D PYG E ++ + D++ +
Sbjct: 7 IGIFDSGVGGLTVARTIMEQLPQESIIYVGDTAHAPYGPRELEDVQNLSRAIADDLVARG 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+L VIACNTA DE R + PA+++A A T++ + ++ T T+
Sbjct: 67 CKML-VIACNTATAAFLDEARQRYDIPVVEVIRPAVRRALATTRNHKVGVIGTEGTINSQ 125
Query: 136 YTSNLI----HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+L + H V+ VE GI +I E +
Sbjct: 126 AYQHLFVQANDAETPNVEAHAVACPDFVPFVER---GITSGR-QILGVAEAYLAPLQAAG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR-----INTHQTRVF 245
D +VL CTHYPL+ + + V + +++ A+ R L R ++ TR+F
Sbjct: 182 VDTLVLGCTHYPLLTGIIQLAMGDNVTLVSSAEETAKDVLRILTERDELAPVDNEPTRLF 241
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
+ +G P+ RL Q F
Sbjct: 242 ES-----TGDPE-TFARLAQRF 257
>gi|326803296|ref|YP_004321114.1| glutamate racemase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650395|gb|AEA00578.1| glutamate racemase [Aerococcus urinae ACS-120-V-Col10a]
Length = 273
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 7/202 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I DSG+GGL V+++ +P IY+ D+ PYG + + + L +
Sbjct: 1 MKRPIGFLDSGVGGLTVVKEAMRQLPNESIIYIGDNARCPYGPRPEAEINEFTQELVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L++ +L VIACNTA + + +R ++ +G + P + A Y+++G I IL+T A
Sbjct: 61 LEQNIKML-VIACNTATAVSLERIRQRV-NIPVIGVIHPGARAANRYSENGHIGILATEA 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + N++ + + HL+ ++ S+ + KK + + +
Sbjct: 119 TINSHFYQNVLLDH----NKHLILYPLVCSKFVPLVESGQYSSPIAKKIVAESLYDLKQT 174
Query: 191 RTDVIVLACTHYPLIVHVFRQL 212
D ++L CTHYPL+ + ++
Sbjct: 175 AIDTLILGCTHYPLLAPLIQKF 196
>gi|55981612|ref|YP_144909.1| glutamate racemase [Thermus thermophilus HB8]
gi|81600355|sp|Q5SHT7|MURI_THET8 RecName: Full=Glutamate racemase
gi|55773025|dbj|BAD71466.1| glutamate racemase [Thermus thermophilus HB8]
Length = 257
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I +FDSG+GGL VL+ +R L+P F+Y D PYG + A+ +R + +
Sbjct: 2 KDPKAPIGVFDSGVGGLTVLKALRRLLPREEFLYFGDTARVPYGG-KPLAMVRRFAWEIA 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + V+ACNTA + +L F PA + A + + GLI +T
Sbjct: 61 GFLLRQGVKAIVVACNTASSAALPDLAEDLSVPVFGVVEPAARAARGFRKVGLIGTQATV 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ Y + ++ C + + VEE + +D + + ++E
Sbjct: 121 ES--GAYPRYVDLAWAKACPLFV-------PLVEE-----GLWDDPVALLVARHYLEDAP 166
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
K + ++L CTHYP + + P V LD+++ A+ AR L
Sbjct: 167 KDLEALILGCTHYPFLKGAIGAVLPG-VALLDSAELTAQEVARAL 210
>gi|327490090|gb|EGF21878.1| glutamate racemase [Streptococcus sanguinis SK1058]
gi|332367402|gb|EGJ45135.1| glutamate racemase [Streptococcus sanguinis SK1059]
Length = 264
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTVSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + K++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|253573241|ref|ZP_04850584.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846769|gb|EES74774.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 272
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 21/231 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-- 69
+Q +I I DSG+GGL V +++ +P IY D PYG ++ LF+
Sbjct: 3 VQQAIAILDSGVGGLTVCKEVMRQLPREKIIYFGDTARAPYGPRSPEEVR-----LFTEQ 57
Query: 70 --DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
D L ++ P + VIACNTA D +++ + +G + P + A + T++G + ++
Sbjct: 58 IVDYLIQFHPKMIVIACNTATAAALDFIKAKV-DIPVIGVIHPGARAAISETKTGKVGVI 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE---IEGC 183
T T+R + + Q + I++ E+ ++ E K+ +E
Sbjct: 117 GTVGTIRSGAYTVALRELNPQ-------TEIVSEACPEFVPLVEHGLYETKEALHVVERS 169
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
E + + D ++L CTHYP + +++ V + ++D AR +L
Sbjct: 170 LREMKKQPMDCLILGCTHYPFLKDPIQRVMGPNVKLISSADETAREISTIL 220
>gi|327470419|gb|EGF15875.1| glutamate racemase [Streptococcus sanguinis SK330]
Length = 264
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + K++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVDSLACPKFVPLVESNEL-----HSSLTKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|312903654|ref|ZP_07762830.1| glutamate racemase [Enterococcus faecalis TX0635]
gi|310633007|gb|EFQ16290.1| glutamate racemase [Enterococcus faecalis TX0635]
Length = 275
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVIQFTWEMADFLL 65
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + ++ VE + + KK +
Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 168
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222
>gi|42523267|ref|NP_968647.1| hypothetical protein Bd1778 [Bdellovibrio bacteriovorus HD100]
gi|39575472|emb|CAE79640.1| murI [Bdellovibrio bacteriovorus HD100]
Length = 268
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL+++ P F+YV D PYG+ ++K + L+K
Sbjct: 9 IGVFDSGIGGLTVLKELALQFPHESFLYVGDTARLPYGSKSPQTIRKYSEQIIQ-FLEKQ 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA + + + P + P ++A + I +L+T AT+
Sbjct: 68 NVKAIVIACNTASSQVPEREIDGLPIYNVIE--PGSQRALELSSGKRIGVLATRATVNSQ 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDV 194
++ IH+ Q + + + EE D + I ++ D
Sbjct: 126 AYTHKIHALDPQAQVFDQACPLFVPLAEE-----GWDADPVTNLIVFRYLSPLLQNHIDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++L CTHYP++ + +++ ++ +D+ ++IA+
Sbjct: 181 LILGCTHYPILKNSIARVTGSSIELVDSGEAIAQ 214
>gi|192988279|pdb|2VVT|A Chain A, Glutamate Racemase (Muri) From E. Faecalis In Complex With
A 9-Benzyl Purine Inhibitor
gi|192988280|pdb|2VVT|B Chain B, Glutamate Racemase (Muri) From E. Faecalis In Complex With
A 9-Benzyl Purine Inhibitor
Length = 290
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 24 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 83
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 84 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 130
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + ++ VE + + KK +
Sbjct: 131 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 186
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 187 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 240
>gi|78066994|ref|YP_369763.1| glutamate racemase [Burkholderia sp. 383]
gi|77967739|gb|ABB09119.1| glutamate racemase [Burkholderia sp. 383]
Length = 286
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 6/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P+ FIYVAD PYG ++ + +R + + + L +
Sbjct: 17 IGIFDSGLGGLSVLRAVRAQLPDESFIYVADSHHAPYGPRDEAFITERTLAI-GEWLARE 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA R SM +G P IK AAA + SG+ +L+T +TL
Sbjct: 76 GAKALVIACNTATARAIAATREHL-SMPLVGVEPGIKPAAAVSASGVAGVLATQSTLNSP 134
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ Y + L +E ++ ++ D +
Sbjct: 135 RFQALLDRYGAGRRFICQPGHGLVEAIERG----DTNSPALRALLDSYLQPMLDDGADTL 190
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VL CTHYP R L + +D SD+IAR+
Sbjct: 191 VLGCTHYPFFTETIRDLVGDRLTLVDTSDAIARQ 224
>gi|315144634|gb|EFT88650.1| glutamate racemase [Enterococcus faecalis TX2141]
gi|315160935|gb|EFU04952.1| glutamate racemase [Enterococcus faecalis TX0645]
Length = 275
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + ++ VE + + KK +
Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 168
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222
>gi|229546200|ref|ZP_04434925.1| glutamate racemase [Enterococcus faecalis TX1322]
gi|229550385|ref|ZP_04439110.1| glutamate racemase [Enterococcus faecalis ATCC 29200]
gi|255973156|ref|ZP_05423742.1| glutamate racemase [Enterococcus faecalis T1]
gi|255976199|ref|ZP_05426785.1| glutamate racemase [Enterococcus faecalis T2]
gi|256618705|ref|ZP_05475551.1| glutamate racemase [Enterococcus faecalis ATCC 4200]
gi|256762129|ref|ZP_05502709.1| glutamate racemase [Enterococcus faecalis T3]
gi|256852771|ref|ZP_05558141.1| glutamate racemase [Enterococcus faecalis T8]
gi|256958618|ref|ZP_05562789.1| glutamate racemase [Enterococcus faecalis DS5]
gi|256965478|ref|ZP_05569649.1| glutamate racemase [Enterococcus faecalis HIP11704]
gi|257078028|ref|ZP_05572389.1| glutamate racemase [Enterococcus faecalis JH1]
gi|257082916|ref|ZP_05577277.1| glutamate racemase [Enterococcus faecalis E1Sol]
gi|257085618|ref|ZP_05579979.1| glutamate racemase [Enterococcus faecalis Fly1]
gi|257089533|ref|ZP_05583894.1| glutamate racemase [Enterococcus faecalis CH188]
gi|257422962|ref|ZP_05599952.1| glutamate racemase [Enterococcus faecalis X98]
gi|307268765|ref|ZP_07550133.1| glutamate racemase [Enterococcus faecalis TX4248]
gi|307273812|ref|ZP_07555034.1| glutamate racemase [Enterococcus faecalis TX0855]
gi|307274577|ref|ZP_07555757.1| glutamate racemase [Enterococcus faecalis TX2134]
gi|307278843|ref|ZP_07559906.1| glutamate racemase [Enterococcus faecalis TX0860]
gi|307288574|ref|ZP_07568558.1| glutamate racemase [Enterococcus faecalis TX0109]
gi|307291104|ref|ZP_07570989.1| glutamate racemase [Enterococcus faecalis TX0411]
gi|312899596|ref|ZP_07758922.1| glutamate racemase [Enterococcus faecalis TX0470]
gi|312951373|ref|ZP_07770271.1| glutamate racemase [Enterococcus faecalis TX0102]
gi|229304507|gb|EEN70503.1| glutamate racemase [Enterococcus faecalis ATCC 29200]
gi|229308724|gb|EEN74711.1| glutamate racemase [Enterococcus faecalis TX1322]
gi|255964174|gb|EET96650.1| glutamate racemase [Enterococcus faecalis T1]
gi|255969071|gb|EET99693.1| glutamate racemase [Enterococcus faecalis T2]
gi|256598232|gb|EEU17408.1| glutamate racemase [Enterococcus faecalis ATCC 4200]
gi|256683380|gb|EEU23075.1| glutamate racemase [Enterococcus faecalis T3]
gi|256711230|gb|EEU26268.1| glutamate racemase [Enterococcus faecalis T8]
gi|256949114|gb|EEU65746.1| glutamate racemase [Enterococcus faecalis DS5]
gi|256955974|gb|EEU72606.1| glutamate racemase [Enterococcus faecalis HIP11704]
gi|256986058|gb|EEU73360.1| glutamate racemase [Enterococcus faecalis JH1]
gi|256990946|gb|EEU78248.1| glutamate racemase [Enterococcus faecalis E1Sol]
gi|256993648|gb|EEU80950.1| glutamate racemase [Enterococcus faecalis Fly1]
gi|256998345|gb|EEU84865.1| glutamate racemase [Enterococcus faecalis CH188]
gi|257164786|gb|EEU94746.1| glutamate racemase [Enterococcus faecalis X98]
gi|306497758|gb|EFM67290.1| glutamate racemase [Enterococcus faecalis TX0411]
gi|306500481|gb|EFM69814.1| glutamate racemase [Enterococcus faecalis TX0109]
gi|306504514|gb|EFM73721.1| glutamate racemase [Enterococcus faecalis TX0860]
gi|306508729|gb|EFM77819.1| glutamate racemase [Enterococcus faecalis TX2134]
gi|306509497|gb|EFM78545.1| glutamate racemase [Enterococcus faecalis TX0855]
gi|306514893|gb|EFM83440.1| glutamate racemase [Enterococcus faecalis TX4248]
gi|310630633|gb|EFQ13916.1| glutamate racemase [Enterococcus faecalis TX0102]
gi|311293275|gb|EFQ71831.1| glutamate racemase [Enterococcus faecalis TX0470]
gi|315030713|gb|EFT42645.1| glutamate racemase [Enterococcus faecalis TX4000]
gi|315031599|gb|EFT43531.1| glutamate racemase [Enterococcus faecalis TX0017]
gi|315034959|gb|EFT46891.1| glutamate racemase [Enterococcus faecalis TX0027]
gi|315148458|gb|EFT92474.1| glutamate racemase [Enterococcus faecalis TX4244]
gi|315153644|gb|EFT97660.1| glutamate racemase [Enterococcus faecalis TX0031]
gi|315156538|gb|EFU00555.1| glutamate racemase [Enterococcus faecalis TX0043]
gi|315158364|gb|EFU02381.1| glutamate racemase [Enterococcus faecalis TX0312]
gi|315165532|gb|EFU09549.1| glutamate racemase [Enterococcus faecalis TX1302]
gi|315168389|gb|EFU12406.1| glutamate racemase [Enterococcus faecalis TX1341]
gi|315170972|gb|EFU14989.1| glutamate racemase [Enterococcus faecalis TX1342]
gi|315174640|gb|EFU18657.1| glutamate racemase [Enterococcus faecalis TX1346]
gi|315577482|gb|EFU89673.1| glutamate racemase [Enterococcus faecalis TX0630]
gi|329576388|gb|EGG57901.1| glutamate racemase [Enterococcus faecalis TX1467]
Length = 275
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + ++ VE + + KK +
Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 168
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222
>gi|327462020|gb|EGF08349.1| glutamate racemase [Streptococcus sanguinis SK1057]
Length = 264
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + K++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVDSLACPKFVPLVESNEL-----HSSLTKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 166 YETLQPLAGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|151567719|pdb|2JFO|A Chain A, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D- And L-Glutamate
gi|151567720|pdb|2JFO|B Chain B, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D- And L-Glutamate
gi|151567721|pdb|2JFP|A Chain A, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D-Glutamate
gi|151567722|pdb|2JFP|B Chain B, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D-Glutamate
Length = 293
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 24 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 83
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 84 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 130
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + ++ VE + + KK +
Sbjct: 131 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 186
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 187 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 240
>gi|253583512|ref|ZP_04860710.1| glutamate racemase [Fusobacterium varium ATCC 27725]
gi|251834084|gb|EES62647.1| glutamate racemase [Fusobacterium varium ATCC 27725]
Length = 263
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K +I +FDSG+GG VL+++ L+P + IY D+ PYG K + D
Sbjct: 2 KKNYNIGVFDSGVGGTTVLKRIIELLPNENIIYYGDNGNAPYG----EKTTKEIQGFCLD 57
Query: 71 ILDKY---QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
I+D + VIACNTA D ++ + ++ +G + P K A + + I +L
Sbjct: 58 IMDFFMMNNCKAVVIACNTATAASLDLIKGRY-TVPVIGVISPGAKSAVETSTNKCIGVL 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
STP T ++ I Y ++ L +E G + ED ++ I I
Sbjct: 117 STPFTAASNAYADEIAKYSKTAKVYQEGCPELCPMIE---AGWETFED--RETIIKNHIS 171
Query: 187 KEGKRTDVIVLACTHYPL 204
K + D +VL CTHYP+
Sbjct: 172 KFPRNVDTVVLGCTHYPI 189
>gi|310826435|ref|YP_003958792.1| hypothetical protein ELI_0815 [Eubacterium limosum KIST612]
gi|308738169|gb|ADO35829.1| hypothetical protein ELI_0815 [Eubacterium limosum KIST612]
Length = 269
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI--LD 73
I + DSGIGG VL++++ +P + +Y+ D PYG E+ + + F SDI L+
Sbjct: 7 IGLIDSGIGGFTVLRELQRQLPRENIVYLGDAKRMPYGERENEEI---IAFGNSDIRFLE 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ACNT +LI + L + P S+ G + I++ + G + +++T AT
Sbjct: 64 NMGVKAILLACNTISSLI-ESLNANVPLFSIVEAGCLATIERQ----KEGAVGLIATTAT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +++ S+ + LA+ + + + + IK+ I+ F E +R
Sbjct: 119 VKNGTYEHILSSHTQALRYITQGTRTLANVINNHPGELALLRQNIKEAIDPIF---ERER 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
++L CTH+P++ ++ P
Sbjct: 176 VSALLLGCTHFPIVRKTIEEMYP 198
>gi|296454516|ref|YP_003661659.1| glutamate racemase [Bifidobacterium longum subsp. longum JDM301]
gi|296183947|gb|ADH00829.1| glutamate racemase [Bifidobacterium longum subsp. longum JDM301]
Length = 264
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 19/230 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++ MP H +Y D PYG ++ L DI++++
Sbjct: 7 IGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGVKTPEQVRA----LSFDIVERF 62
Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--------AYTQSGLIS 124
Q V + VIACNTA + ++LR + + +G PA+K A + +
Sbjct: 63 VRQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TP TLR + L+ + S I L VE G D + + + G F
Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + + D +VL CTH+ FR+L P +D ++ R +L
Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVL 228
>gi|154686974|ref|YP_001422135.1| glutamate racemase [Bacillus amyloliquefaciens FZB42]
gi|166231025|sp|A7Z7C8|MURI_BACA2 RecName: Full=Glutamate racemase
gi|154352825|gb|ABS74904.1| RacE [Bacillus amyloliquefaciens FZB42]
Length = 272
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 115/248 (46%), Gaps = 11/248 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 61
Query: 72 LDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L+ + + VIACNTA + ++D R T + +G + P + A T++ I ++ T
Sbjct: 62 LENHHIKMLVIACNTATAIALEDIQRKT--DIPVVGVIQPGARTAIKVTKNQHIGVIGTV 119
Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ R Y L+ ++ + + +L VE + ++ ++ +E +
Sbjct: 120 NTIKSRAYEQALL-GLNAELQVENTACPLLVPFVESG----RFLQESAEEAVEASLEPLK 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDD 247
G D ++L CTHYP++ + V + + D AR +L +Q++ +
Sbjct: 175 GTSIDTLILGCTHYPILKDPIQNYMGEHVKIISSGDETAREVSTILSYKGLLNQSKHAPE 234
Query: 248 HALFLSGK 255
H +G+
Sbjct: 235 HQFLTTGE 242
>gi|298253437|ref|ZP_06977229.1| glutamate racemase [Gardnerella vaginalis 5-1]
gi|297532832|gb|EFH71718.1| glutamate racemase [Gardnerella vaginalis 5-1]
Length = 256
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GG+ V +++ +P IY D PYG +KK L F + +
Sbjct: 6 AIGVFDSGLGGISVARQLHAALPHERIIYFGDSANAPYGIKTPEEVKK-LSFAIVEHFVR 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATL 132
VIACNTA + ++LR+ + ++ +G PA+K A + + + +TP TL
Sbjct: 65 LNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGEPQRVIVAATPLTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R ++L+ + I L VE G D + + F E +
Sbjct: 124 RERKFADLLQRFSQNNTIFSQPCPDLVRIVER---GELSNRDVVFAALHKYFDEYDLDSI 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+ FR+ P + +D ++ R +L
Sbjct: 181 DSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKIL 222
>gi|256962283|ref|ZP_05566454.1| glutamate racemase [Enterococcus faecalis Merz96]
gi|257086476|ref|ZP_05580837.1| glutamate racemase [Enterococcus faecalis D6]
gi|257418950|ref|ZP_05595944.1| glutamate racemase [Enterococcus faecalis T11]
gi|293383312|ref|ZP_06629227.1| glutamate racemase [Enterococcus faecalis R712]
gi|293387531|ref|ZP_06632080.1| glutamate racemase [Enterococcus faecalis S613]
gi|312905819|ref|ZP_07764839.1| glutamate racemase [Enterococcus faecalis DAPTO 512]
gi|312909126|ref|ZP_07767985.1| glutamate racemase [Enterococcus faecalis DAPTO 516]
gi|256952779|gb|EEU69411.1| glutamate racemase [Enterococcus faecalis Merz96]
gi|256994506|gb|EEU81808.1| glutamate racemase [Enterococcus faecalis D6]
gi|257160778|gb|EEU90738.1| glutamate racemase [Enterococcus faecalis T11]
gi|291079335|gb|EFE16699.1| glutamate racemase [Enterococcus faecalis R712]
gi|291083041|gb|EFE20004.1| glutamate racemase [Enterococcus faecalis S613]
gi|310628158|gb|EFQ11441.1| glutamate racemase [Enterococcus faecalis DAPTO 512]
gi|311290550|gb|EFQ69106.1| glutamate racemase [Enterococcus faecalis DAPTO 516]
gi|315028078|gb|EFT40010.1| glutamate racemase [Enterococcus faecalis TX2137]
gi|315150399|gb|EFT94415.1| glutamate racemase [Enterococcus faecalis TX0012]
gi|327534752|gb|AEA93586.1| glutamate racemase [Enterococcus faecalis OG1RF]
Length = 275
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + ++ VE + + KK +
Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLACPKFVPIVESN----QYRSSVAKKIV 168
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222
>gi|294780992|ref|ZP_06746344.1| glutamate racemase [Enterococcus faecalis PC1.1]
gi|300859676|ref|ZP_07105764.1| glutamate racemase [Enterococcus faecalis TUSoD Ef11]
gi|294451938|gb|EFG20388.1| glutamate racemase [Enterococcus faecalis PC1.1]
gi|300850494|gb|EFK78243.1| glutamate racemase [Enterococcus faecalis TUSoD Ef11]
gi|323480360|gb|ADX79799.1| glutamate racemase [Enterococcus faecalis 62]
Length = 273
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 64 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 110
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + ++ VE + + KK +
Sbjct: 111 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 166
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 167 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 220
>gi|312132407|ref|YP_003999746.1| muri [Bifidobacterium longum subsp. longum BBMN68]
gi|311772761|gb|ADQ02249.1| MurI [Bifidobacterium longum subsp. longum BBMN68]
Length = 264
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 19/230 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++ MP H +Y D PYG ++ L DI++++
Sbjct: 7 IGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRA----LSFDIVERF 62
Query: 76 --QPVLSV-IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--------AYTQSGLIS 124
Q V +V IACNTA + ++LR + + +G PA+K A + +
Sbjct: 63 VRQGVKAVAIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TP TLR + L+ + S I L VE G D + + + G F
Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + + D +VL CTH+ FR+L P +D ++ R +L
Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVL 228
>gi|295112705|emb|CBL31342.1| glutamate racemase [Enterococcus sp. 7L76]
Length = 273
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 64 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 110
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + ++ VE + + KK +
Sbjct: 111 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 166
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 167 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 220
>gi|257415735|ref|ZP_05592729.1| glutamate racemase [Enterococcus faecalis AR01/DG]
gi|257157563|gb|EEU87523.1| glutamate racemase [Enterococcus faecalis ARO1/DG]
Length = 275
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + ++ VE + + KK +
Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESN----QYRSSVAKKIV 168
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222
>gi|283782931|ref|YP_003373685.1| glutamate racemase [Gardnerella vaginalis 409-05]
gi|283441996|gb|ADB14462.1| glutamate racemase [Gardnerella vaginalis 409-05]
Length = 256
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GG+ V +++ +P IY D PYG +KK L F + +
Sbjct: 6 AIGVFDSGLGGISVARQLHAALPHERIIYFGDSANAPYGIKTPEEVKK-LSFAIVEHFVR 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATL 132
VIACNTA + ++LR+ + ++ +G PA+K A + + + +TP TL
Sbjct: 65 LNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGEPQRVIVAATPLTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R ++L+ + I L VE G D + + F E +
Sbjct: 124 RERKFADLLQRFSQNNTIFSQPCPDLVRIVER---GELNNRDVVFAALHKYFDEYDLDSI 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+ FR+ P + +D ++ R +L
Sbjct: 181 DSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKIL 222
>gi|300869685|ref|YP_003784556.1| glutamate racemase [Brachyspira pilosicoli 95/1000]
gi|300687384|gb|ADK30055.1| glutamate racemase [Brachyspira pilosicoli 95/1000]
Length = 267
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GG+ VL+K+ ++P ++IY+ D+ PYG+ + +L D L K
Sbjct: 8 IAVFDSGFGGISVLKKLLNILPNENYIYLGDNHNIPYGDKSKEEI-TQLSIKILDFLIKQ 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++VIACNT D L+ + ++ T++ ISI++T T+
Sbjct: 67 NCKMAVIACNTITASSYDVLKEKYNIPIIEIISNGVEDIIDNTKNNNISIMATEFTVHSN 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEE----YACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I Y + + V+ L +E Y I + E+ +++K
Sbjct: 127 MYHDKILDYNDKIKVTQVACQKLCPMIENNWYSYDDRILVLEE---------YVKKIDDN 177
Query: 192 TDVIVLACTHYPLIV 206
+D ++LACTHYP I+
Sbjct: 178 SDTLLLACTHYPFII 192
>gi|291456377|ref|ZP_06595767.1| glutamate racemase [Bifidobacterium breve DSM 20213]
gi|291381654|gb|EFE89172.1| glutamate racemase [Bifidobacterium breve DSM 20213]
Length = 264
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 13/227 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++ MP H +Y D PYG +K L F + ++
Sbjct: 7 IGVFDSGLGGISVAREIAKDMPAEHVLYFGDSANAPYGVKTPEQVKA-LSFDIVERFVEH 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL--------ISILS 127
VIACNTA + ++LR + + +G PA+K A + L + + +
Sbjct: 66 GVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDAPLGQQHIPQRVIVAA 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR + L+ + S I L VE G D + + + F
Sbjct: 125 TPLTLRERKFAELMKRFDSDNTIFKEPCPDLVEIVESGQLG---NHDLVMRTLHHYFDRY 181
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ R D +VL CTH+ FR+L P +D ++ R +L
Sbjct: 182 DLDRIDSVVLGCTHFVFYRDYFRELLPKHAAIIDGNEGTVRHLGVVL 228
>gi|56751751|ref|YP_172452.1| glutamate racemase [Synechococcus elongatus PCC 6301]
gi|81301170|ref|YP_401378.1| glutamate racemase [Synechococcus elongatus PCC 7942]
gi|56686710|dbj|BAD79932.1| glutamate racemase [Synechococcus elongatus PCC 6301]
gi|81170051|gb|ABB58391.1| glutamate racemase [Synechococcus elongatus PCC 7942]
Length = 289
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 21/220 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL++++ +P F+Y D PYG +++ +ILD
Sbjct: 16 IGVFDSGVGGLTVLRELQRQLPHESFLYFGDTARLPYGTRSPAEIRQ----FVREILDWM 71
Query: 76 QPV---LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
Q L V+ACNT+ L + LR + +M +G + PA + A Q I +++T AT
Sbjct: 72 QAEGCKLVVMACNTSSALALEALRGDY-TMPLIGLIQPAARVAVQRGQR--IGVIATAAT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE---IKKEIEGCFIEKE 188
+ + + + VE+ +I + + + + IE +
Sbjct: 129 AQSRAYRQALREANPNVQVWEIGCPEFVPLVEQQ----RIHDPQTLQVAAQYLAPLIEAQ 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++ CTHYP + V +QL P LD ++++ R
Sbjct: 185 ---VDTLIYGCTHYPHLAPVIQQLLPSSTHLLDPAEAVTR 221
>gi|23336033|ref|ZP_00121262.1| COG0796: Glutamate racemase [Bifidobacterium longum DJO10A]
gi|23464712|ref|NP_695315.1| glutamate racemase [Bifidobacterium longum NCC2705]
gi|189438967|ref|YP_001954048.1| glutamate racemase [Bifidobacterium longum DJO10A]
gi|227546821|ref|ZP_03976870.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239620799|ref|ZP_04663830.1| glutamate racemase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|317481620|ref|ZP_07940656.1| Asp/Glu/Hydantoin racemase [Bifidobacterium sp. 12_1_47BFAA]
gi|322689588|ref|YP_004209322.1| glutamate racemase [Bifidobacterium longum subsp. infantis 157F]
gi|322691549|ref|YP_004221119.1| glutamate racemase [Bifidobacterium longum subsp. longum JCM 1217]
gi|29839545|sp|Q8G7Z8|MURI_BIFLO RecName: Full=Glutamate racemase
gi|229486231|sp|B3DQ51|MURI_BIFLD RecName: Full=Glutamate racemase
gi|23325278|gb|AAN23951.1| glutamate racemase [Bifidobacterium longum NCC2705]
gi|189427402|gb|ACD97550.1| Glutamate racemase [Bifidobacterium longum DJO10A]
gi|227212783|gb|EEI80664.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239516375|gb|EEQ56242.1| glutamate racemase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|316916980|gb|EFV38366.1| Asp/Glu/Hydantoin racemase [Bifidobacterium sp. 12_1_47BFAA]
gi|320456405|dbj|BAJ67027.1| glutamate racemase [Bifidobacterium longum subsp. longum JCM 1217]
gi|320460924|dbj|BAJ71544.1| glutamate racemase [Bifidobacterium longum subsp. infantis 157F]
Length = 264
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 19/230 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++ MP H +Y D PYG ++ L DI++++
Sbjct: 7 IGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRA----LSFDIVERF 62
Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--------AYTQSGLIS 124
Q V + VIACNTA + ++LR + + +G PA+K A + +
Sbjct: 63 VRQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TP TLR + L+ + S I L VE G D + + + G F
Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + + D +VL CTH+ FR+L P +D ++ R +L
Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVL 228
>gi|301055994|ref|YP_003794205.1| glutamate racemase [Bacillus anthracis CI]
gi|300378163|gb|ADK07067.1| glutamate racemase [Bacillus cereus biovar anthracis str. CI]
Length = 267
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + +
Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 61 LDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ + + VE ++ + +++ ++ K
Sbjct: 119 TVKSGAYEEALKSINNRVMVESFACPPFVELVESGNFESEMAYEVVRETLQPL------K 172
Query: 191 RTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245
TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + +
Sbjct: 173 NTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 230
Query: 246 DDHALFLSGK 255
DH +GK
Sbjct: 231 SDHLFLTTGK 240
>gi|255534473|ref|YP_003094844.1| Glutamate racemase [Flavobacteriaceae bacterium 3519-10]
gi|255340669|gb|ACU06782.1| Glutamate racemase [Flavobacteriaceae bacterium 3519-10]
Length = 282
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 8/223 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V ++++ L+P + IY D PYG A+ + +L+K
Sbjct: 23 IGIFDSGVGGLTVAKEIKRLLPNENLIYFGDTKHLPYGEKSRDAIVGYSTKITRFLLEKN 82
Query: 76 QPVLSVIACNTAF-TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACN+A +K+ L + + + + + AY + +++T AT+
Sbjct: 83 CKAI-VIACNSATANALKEVLDEVADRVPVIDVINPVAEKVAYEIHNNVGVIATKATVNS 141
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRTD 193
I + + +++ +L +EE K I I ++ K +
Sbjct: 142 GLYRKSIRKHNKFIKVDELATPLLVPAIEE-----GFKNHPITHSIVYNYLSNNKLKNIE 196
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++L CTHYPL++ RQ V +D+ +A + R +L +
Sbjct: 197 TLILGCTHYPLLIDEIRQYYGNRVRVIDSPGIVANQLRIILDK 239
>gi|21219535|ref|NP_625314.1| glutamate racemase [Streptomyces coelicolor A3(2)]
gi|11071227|emb|CAC14386.1| putative glutamate racemase [Streptomyces coelicolor A3(2)]
Length = 280
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 79/196 (40%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ I D G P+G L R + + +
Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPKDLTGRALGVAE-AAAAH 80
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT
Sbjct: 81 RPDALIVGCNTATVHALPALRARLEPDVPVIGTVPAIKPAAA--GGGPVAIWATPATTGS 138
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE ++ E
Sbjct: 139 PYQRGLIEDFAGDTEVTEVPCPGLADAVEH-------ADETAITEAVAAAAALTPDDVTT 191
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 192 VVLGCTHYELVAERIR 207
>gi|221310780|ref|ZP_03592627.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315105|ref|ZP_03596910.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221320023|ref|ZP_03601317.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. JH642]
gi|221324306|ref|ZP_03605600.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. SMY]
gi|3241851|dbj|BAA28871.1| glutamate racemase [Bacillus subtilis]
gi|291485269|dbj|BAI86344.1| glutamate racemase [Bacillus subtilis subsp. natto BEST195]
Length = 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 7/248 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T
Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE K ++ +K + +
Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKTSL----YPLKDT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH
Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 235
Query: 250 LFLSGKPD 257
+G D
Sbjct: 236 FLTTGARD 243
>gi|332358334|gb|EGJ36160.1| glutamate racemase [Streptococcus sanguinis SK355]
Length = 264
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 171 PLV-----GRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|224532254|ref|ZP_03672886.1| glutamate racemase [Borrelia valaisiana VS116]
gi|224511719|gb|EEF82125.1| glutamate racemase [Borrelia valaisiana VS116]
Length = 260
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 21/198 (10%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++FL
Sbjct: 2 KNFKEVIIVFDSGIGGLSYFKYIKSKIEGYQYVYVADNKNFPYGEKSSDYLLQSVLFLIE 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ Y + V+ACNT + ++L FP + L V ++ + A + +++T
Sbjct: 62 KLKKIYNIIALVLACNTISVSVYNKLNFVFPVIYTLPEVSSVSELALKK----VLLIATN 117
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184
TL + + Q +IH +I+ + E EY G K ++D ++ +E
Sbjct: 118 TTLESKFVKD-------QVNIH--DDLIVKAAGELVNFVEY--GEKFRKDALRC-LEALK 165
Query: 185 IEKEGKRTDVIVLACTHY 202
E +++ L CTHY
Sbjct: 166 FEVVHTGREIVFLGCTHY 183
>gi|317478578|ref|ZP_07937735.1| Asp/Glu/Hydantoin racemase [Bacteroides sp. 4_1_36]
gi|316905219|gb|EFV27016.1| Asp/Glu/Hydantoin racemase [Bacteroides sp. 4_1_36]
Length = 279
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 9/218 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + +
Sbjct: 12 IGIFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA + ++L P LG + P ++ TQS + +L+T
Sbjct: 71 GCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H + + + S VE + + I+K I G + K+
Sbjct: 131 GTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNI-GNLLAKD- 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ D ++L CTH+PL++ +Q P + + + +A
Sbjct: 189 TQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVA 226
>gi|320451387|ref|YP_004203483.1| glutamate racemase [Thermus scotoductus SA-01]
gi|320151556|gb|ADW22934.1| glutamate racemase [Thermus scotoductus SA-01]
Length = 257
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I +FDSG+GGL VL +R +P+ F+Y D PYG+ + ++ +R + +
Sbjct: 2 KDPRRPIGVFDSGVGGLTVLSALRRALPQEDFLYFGDTARVPYGS-KPLSMVRRFAWEIA 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + V+ACNTA + +L F P K A Y + GLI +T
Sbjct: 61 GFLLRQGVKAIVVACNTASSAALPDLAEDLSVPVFGVLEPVAKAARGYGKVGLIGTQATV 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ R Y + S+ C + + VEE + +D + + ++E
Sbjct: 121 ES--RAYERYVGVSWARACPLFV-------PLVEE-----GLWDDPVALLVARHYLEDAP 166
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ + ++L CTHYP + ++ P V +D++++ A
Sbjct: 167 QDLEALILGCTHYPFLKGTLAKVLPG-VRLIDSAEATA 203
>gi|328949910|ref|YP_004367245.1| Glutamate racemase [Marinithermus hydrothermalis DSM 14884]
gi|328450234|gb|AEB11135.1| Glutamate racemase [Marinithermus hydrothermalis DSM 14884]
Length = 264
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P F+Y D PYG+ + AL ++ + S L +
Sbjct: 10 IGVFDSGVGGLTVLRALRAALPGEDFLYFGDTARVPYGS-KPPALVRQFAWEISGFLLRK 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR- 134
V+ACNTA ++ +L ++ + PA+ AAA G + ++ T T++
Sbjct: 69 GVKAIVVACNTASSVALPDLAASLSVPVYGVLEPAV--AAALRVEGRVGLIGTETTVQSG 126
Query: 135 TYTSNLIHS----YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
Y + L + + C + + VEE + ED + + + +++ K
Sbjct: 127 AYQARLARAGRAVWARPCPLFV-------PLVEE-----GLWEDGVARLVVAHYLKDAPK 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++L CTHYP + V ++ P V +D+++ AR
Sbjct: 175 DLSALILGCTHYPYLKPVIAEVLPG-VQLIDSAEVTAR 211
>gi|167741431|ref|ZP_02414205.1| glutamate racemase [Burkholderia pseudomallei 14]
Length = 171
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + ++ +
Sbjct: 18 IGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLVAQG 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR
Sbjct: 78 AKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRSA 135
Query: 136 YTSNLIHSYVSQCH 149
L+ + + C
Sbjct: 136 RFEALLARHAADCR 149
>gi|25028959|ref|NP_739013.1| glutamate racemase [Corynebacterium efficiens YS-314]
gi|23494246|dbj|BAC19213.1| glutamate racemase [Corynebacterium efficiens YS-314]
Length = 316
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 6/195 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++
Sbjct: 56 IGIFDSGVGGLTVARTIIDQLPHESIIYIGDTANGPYGPLPIARVREHALRIADELVERG 115
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 116 CKMI-VIACNTASAAFLRDARERYDVPVVEVILPAVRRAVAATRNGKVGVIGTVGTINSG 174
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L + S +H + VE GI +I EG + + D +
Sbjct: 175 AYQDLFAASPS-IEVHAAACPRFVDFVER---GIT-SGRQILNIAEGYLEPLQAQGVDTL 229
Query: 196 VLACTHYPLIVHVFR 210
VL CTHYPL+ V +
Sbjct: 230 VLGCTHYPLLSGVIQ 244
>gi|308235626|ref|ZP_07666363.1| glutamate racemase [Gardnerella vaginalis ATCC 14018]
gi|311114374|ref|YP_003985595.1| glutamate racemase [Gardnerella vaginalis ATCC 14019]
gi|310945868|gb|ADP38572.1| glutamate racemase [Gardnerella vaginalis ATCC 14019]
Length = 260
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 7/225 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V++++R MP IY D PYG +++ L F +
Sbjct: 7 IGVFDSGLGGISVVRELREAMPNERIIYFGDSANAPYGIKTPQEVRE-LSFKIVEHFASL 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133
VIACNTA + +LR + SM +G PA+K A + + + +TP TL+
Sbjct: 66 NVKAIVIACNTATSAAVKDLREHY-SMPIIGMEPALKLACDLGGGKPQRVIVAATPLTLK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L++ + H + S VE G ++ + + F + D
Sbjct: 125 ERKFAELMNRFTQD---HQIFSRPCPDLVEIVENGDLGNKNIVMSALHKYFDSYDLNNID 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+VL CTH+ FR+ P V +D + + +L +N
Sbjct: 182 SVVLGCTHFVFYKSYFREFLPDCVKIVDGNAGTIHHLKSVLDSMN 226
>gi|291516158|emb|CBK69774.1| glutamate racemase [Bifidobacterium longum subsp. longum F8]
Length = 264
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 19/230 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++ MP H +Y D PYG ++ L DI++++
Sbjct: 7 IGVFDSGLGGISVARQIAKDMPAEHVLYFGDSASAPYGIKTPEQVRA----LSFDIVERF 62
Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--------AYTQSGLIS 124
Q V + VIACNTA + ++LR + + +G PA+K A + +
Sbjct: 63 VRQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TP TLR + L+ + S I L VE G D + + + G F
Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + + D +VL CTH+ FR+L P +D ++ R +L
Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVL 228
>gi|288819213|ref|YP_003433561.1| glutamate racemase [Hydrogenobacter thermophilus TK-6]
gi|288788613|dbj|BAI70360.1| glutamate racemase [Hydrogenobacter thermophilus TK-6]
gi|308752795|gb|ADO46278.1| glutamate racemase [Hydrogenobacter thermophilus TK-6]
Length = 255
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 19/238 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL++++ P +Y+ D PYG + R ++ L ++
Sbjct: 5 VFDSGVGGLTVLKEIKKAFPSLDLVYLGDTARVPYGGKSKDTI-IRYSLECAEFLIRFDI 63
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR-TY 136
L V+ACNTA + D L+ F P +++A +++ +I ++ T +T++ Y
Sbjct: 64 DLLVVACNTASSYALDILKKELGIPVFGVIKPGVRKALEVSKNKVIGVIGTKSTIKSGVY 123
Query: 137 TSNLIHS----YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L+ + Y C + + VEE G+ D + K ++ + + +
Sbjct: 124 QRSLMEAGSVVYAKACPLFV-------PLVEE---GLT-HGDIVDKVVDFYLRDFKNTQM 172
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D ++L CTHYPL+ + V +D++ ++ + T R+ F DH+
Sbjct: 173 DTLILGCTHYPLLAEAIKNYM-GDVQIVDSASALVEDISSFVKNEGTSSLRLFFTDHS 229
>gi|319946457|ref|ZP_08020694.1| glutamate racemase [Streptococcus australis ATCC 700641]
gi|319747425|gb|EFV99681.1| glutamate racemase [Streptococcus australis ATCC 700641]
Length = 264
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 16/246 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVVYIGDSARAPYGPRPADQIRD 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ +L K ++ V+ACNTA ++ +E++ + LG + P A T+S
Sbjct: 53 YTWEMVRFLLTKNVKMI-VLACNTATAVVWEEVKEAL-DIPVLGVILPGASAAIKATKSK 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I S + + ++ VE + + K++
Sbjct: 111 RIGVIGTPMTVASDIYRKKIQSLSPEMAVESLACPKFVPLVESNEL-----QSSVTKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ + D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 166 YETLKPLAGKVDTLVLGCTHYPLLRPIIQNVMGPEVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD 247
+R +D
Sbjct: 226 SRQLED 231
>gi|313884172|ref|ZP_07817938.1| glutamate racemase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620619|gb|EFR32042.1| glutamate racemase [Eremococcus coleocola ACS-139-V-Col8]
Length = 280
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 7/224 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I DSG GGL VL++ +P IY+ D PYG + +R ++ ++ L +
Sbjct: 6 IGFIDSGFGGLTVLKQSLKQLPNESSIYLGDSARAPYGVRSVDEI-RRFIWQMTNFLREK 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATLRR 134
+ VIACNT DE+R++ ++ +G + A +AA T++ + I+ TPAT+
Sbjct: 65 GIKMLVIACNTGAAAALDEIRASL-AIPVVGVIHAGSRAAILTTENNKVGIIGTPATINS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ +IH +Q + + VEE ++ + E + + D
Sbjct: 124 DSYARIIHEKNAQLQVFSKACPDFVPIVEEN----QMVQPETMNTVANYLAPLKNAGVDT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+VL CTHYP + ++ V+ +D+ LL N
Sbjct: 180 LVLGCTHYPHLRPQIQEFMGPEVELIDSGVETINEVSALLDYFN 223
>gi|212715492|ref|ZP_03323620.1| hypothetical protein BIFCAT_00389 [Bifidobacterium catenulatum DSM
16992]
gi|212661574|gb|EEB22149.1| hypothetical protein BIFCAT_00389 [Bifidobacterium catenulatum DSM
16992]
Length = 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 13/218 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++R MP +Y D PYG ++K L I+ ++
Sbjct: 20 IGVFDSGLGGISVAREIRRDMPNERVLYFGDSANAPYGTKSPEQVRK----LSDAIVKRF 75
Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPA 130
Q V + VIACNTA + +ELR + + +G PA+K A + + + +TP
Sbjct: 76 VEQGVKAVVIACNTATSAAANELRDKY-DIPIIGMEPALKVACDRGHGNRQRVIVAATPL 134
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + + H + VE G D + + F + +
Sbjct: 135 TLRERKFAVLMDRFKTD---HTIFPEPCPGLVEIVEHGQLDDHDVVMHTLHQYFDQYDLS 191
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTH+ FR+L P +D ++ R
Sbjct: 192 TIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVR 229
>gi|47776277|dbj|BAD20742.1| glutamate racemase [Bacillus subtilis]
Length = 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T
Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE + DEI K +
Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKF-LDQTADEIVKT---SLYPLKDT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH
Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 235
Query: 250 LFLSGKPD 257
+G D
Sbjct: 236 FLTTGARD 243
>gi|296125119|ref|YP_003632371.1| glutamate racemase [Brachyspira murdochii DSM 12563]
gi|296016935|gb|ADG70172.1| glutamate racemase [Brachyspira murdochii DSM 12563]
Length = 275
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+++ L+P ++IY+ D++ PYG+ + + L + L
Sbjct: 12 IAVFDSGFGGLTVLKQLLQLLPNENYIYLGDNINIPYGDKSEEEI-INLTSKMVEFLISK 70
Query: 76 QPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + +IACNT A+ ++K + + G A+ + T++ IS+++T T
Sbjct: 71 KCKIIIIACNTISACAYNILKQKYDIPIIEVISNGVADALNK----TKNNNISVMATEFT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ N I+ + + I +S L +E + D +K +++ +
Sbjct: 127 VHSNVYKNKINKHNKESKITQISCKELCPMIENDWYSYDNRLDVLKN-----YLKNIDDK 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPV 217
+D ++LACTHYP I+ ++ + V
Sbjct: 182 SDTLILACTHYPHIIDDIKKTLEYNV 207
>gi|227552906|ref|ZP_03982955.1| glutamate racemase [Enterococcus faecalis HH22]
gi|227177960|gb|EEI58932.1| glutamate racemase [Enterococcus faecalis HH22]
Length = 275
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG +WE D L
Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFSWEMADFLL 65
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + + VE + + KK +
Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESN----QYRSSVAKKIV 168
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222
>gi|119952902|ref|YP_945111.1| glutamate racemase [Borrelia turicatae 91E135]
gi|119861673|gb|AAX17441.1| glutamate racemase [Borrelia turicatae 91E135]
Length = 254
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+N I+IFDSG+GGL + + + +++YVAD+ FPYG L K ++ L +
Sbjct: 4 LKNVIVIFDSGVGGLSYFEYISKRFVKRNYVYVADNKNFPYGEKSSDFLLKEILELILKL 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y VIACNTA + D+L +FP + L +V +++ AY + + +++T AT
Sbjct: 64 EQMYNVAAIVIACNTASISVYDKLNFSFPVIYTLPSVCLVEE-LAYKR---VILVATHAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLV--SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + CH L+ + L + VE G + KED +K + +E +
Sbjct: 120 INSKFIQR-----EKDCHWDLILKPASELVNFVEY---GDRFKEDALKY-LNFLKLEVKA 170
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPV 217
R D++ L CTHY I + PV
Sbjct: 171 SRRDMVFLGCTHYLHIKDMIENFLGIPV 198
>gi|89098912|ref|ZP_01171792.1| glutamate racemase [Bacillus sp. NRRL B-14911]
gi|89086316|gb|EAR65437.1| glutamate racemase [Bacillus sp. NRRL B-14911]
Length = 266
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 11/226 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I I DSG+GGL V +++ +P + +Y+ D PYG + +R + ++
Sbjct: 1 MKQPIGIIDSGVGGLTVAKEVMRQLPNENIVYLGDTARCPYGPRTAEEV-RRFTWQMTEF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ P + LG + P + A ++S I I+ T
Sbjct: 60 LLTQDIKMLVIACNTATAVVLEEIQEKLP-IPVLGVIYPGARAALKVSKSNKIGIIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + ++ VE EY + KK +
Sbjct: 119 TVNSKAYEKALKQINRKVCVKPLACPKFVPLVESGEYGSAVA------KKIVAETLKPLR 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
K D ++L CTHYPL+ + + + V + + + AR +L
Sbjct: 173 NKDLDTLILGCTHYPLLEPLIKNIMGPGVKVISSGEETAREVSTIL 218
>gi|67921667|ref|ZP_00515185.1| Glutamate racemase [Crocosphaera watsonii WH 8501]
gi|67856779|gb|EAM52020.1| Glutamate racemase [Crocosphaera watsonii WH 8501]
Length = 281
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 14/226 (6%)
Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+++QNS I +FDSG+GGL VL+++ +P+ +Y AD PYG D + ++ L F+
Sbjct: 2 REIQNSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYG---DRSAREILEFVR 58
Query: 69 SDI--LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
+ + + + + ++ACNT+ L + +R F + LG + P K AA Q I +
Sbjct: 59 EILAWMTQQRVKMVIMACNTSSALAVEAVRQEF-DLPILGVILPGAK--AAVKQGQRIGV 115
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+STPAT + I + V +E+ + E+ +E +
Sbjct: 116 ISTPATAKSQAYRQAIQEINPNAQVWQVGCPPFVPLIEQNRLW-DVHTKEVAREYLTPLL 174
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
D +V CTHY + V + + P V +D + + + A+
Sbjct: 175 ---AHNIDTLVYGCTHYRHLEPVIKTIIPTTVKLVDPASYVVQAAK 217
>gi|160888040|ref|ZP_02069043.1| hypothetical protein BACUNI_00448 [Bacteroides uniformis ATCC 8492]
gi|156862539|gb|EDO55970.1| hypothetical protein BACUNI_00448 [Bacteroides uniformis ATCC 8492]
Length = 279
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 9/218 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + +
Sbjct: 12 IGIFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA + ++L P LG + P ++ TQS + +L+T
Sbjct: 71 GCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H + + + S VE + + I+K I G + K+
Sbjct: 131 GTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNI-GNLLAKD- 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ D ++L CTH+PL++ +Q P + + + +A
Sbjct: 189 TQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVA 226
>gi|259508024|ref|ZP_05750924.1| glutamate racemase [Corynebacterium efficiens YS-314]
gi|29839541|sp|Q8FMU6|MURI_COREF RecName: Full=Glutamate racemase
gi|259164365|gb|EEW48919.1| glutamate racemase [Corynebacterium efficiens YS-314]
Length = 273
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 6/195 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++
Sbjct: 13 IGIFDSGVGGLTVARTIIDQLPHESIIYIGDTANGPYGPLPIARVREHALRIADELVERG 72
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 73 CKMI-VIACNTASAAFLRDARERYDVPVVEVILPAVRRAVAATRNGKVGVIGTVGTINSG 131
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L + S +H + VE GI +I EG + + D +
Sbjct: 132 AYQDLFAASPS-IEVHAAACPRFVDFVER---GIT-SGRQILNIAEGYLEPLQAQGVDTL 186
Query: 196 VLACTHYPLIVHVFR 210
VL CTHYPL+ V +
Sbjct: 187 VLGCTHYPLLSGVIQ 201
>gi|326800551|ref|YP_004318370.1| glutamate racemase [Sphingobacterium sp. 21]
gi|326551315|gb|ADZ79700.1| Glutamate racemase [Sphingobacterium sp. 21]
Length = 276
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 9/219 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL V +++ +P+Y +IY D+ PYG + M + + D
Sbjct: 4 IGIFDSGYGGLTVFKEISHTLPQYDYIYFGDNARVPYGTRSYDTVYHYTMECVNHLFD-L 62
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA T+ + +L LG + P + +T S + IL+T
Sbjct: 63 GCHLVILACNTASAKALRTIQQKDLPKRTDLRNVLGVIRPTTEIIDRFTISNHVGILATS 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ IH + Q ++ + + VE +K+ I+ ++
Sbjct: 123 GTVNSASYVLEIHKFFPQIKVYQEACPMWVPLVENNEMDSPGARYFVKQHIDRLL--QQS 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++LACTHYPL++ ++ P V + +A+
Sbjct: 181 TEIDAVILACTHYPLLLPTIKEFMPKGVQVISQGSIVAK 219
>gi|160947016|ref|ZP_02094219.1| hypothetical protein PEPMIC_00978 [Parvimonas micra ATCC 33270]
gi|158447400|gb|EDP24395.1| hypothetical protein PEPMIC_00978 [Parvimonas micra ATCC 33270]
Length = 267
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSGIGGL V++++ ++P +Y D PYG + + KR + L++
Sbjct: 5 SIGVFDSGIGGLTVVKELTKILPNEKIVYFGDTARVPYGTRSEETI-KRFSKECIEFLNQ 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+IACNT + + L+ F +P K A+ T++ I ++ T AT+
Sbjct: 64 KDIKALIIACNTVSAVALEMLKELFDIYILGVIIPGSKMASYVTKNKKIGVIGTNATVLS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEGKRTD 193
I S S+ ++ + + VEE + EI E ++ E + D
Sbjct: 124 GAYEKCIKSENSENIVYSKACPLFVPIVEE-----GLSNTEIALETAKYYLNELINQDVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
IV+ CTHYP++ + + + + ++ + A +
Sbjct: 179 TIVMGCTHYPILENTIKAVVGKDISLVNPAKETANEMK 216
>gi|225351503|ref|ZP_03742526.1| hypothetical protein BIFPSEUDO_03099 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157847|gb|EEG71130.1| hypothetical protein BIFPSEUDO_03099 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 271
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 13/224 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V +++R MP +Y D PYG ++K L I+ ++
Sbjct: 20 IGVFDSGLGGISVAREIRRDMPNERVLYFGDSANAPYGTKSPEQVRK----LSDAIVKRF 75
Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPA 130
Q V + VIACNTA + +ELR + + +G PA+K A + + + +TP
Sbjct: 76 VEQGVKAVVIACNTATSAAANELRDKY-DIPIIGMEPALKVACDRGHGNRQRVIVAATPL 134
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + + H + VE G D + + F + +
Sbjct: 135 TLRERKFAVLMDRFKTD---HTIFPEPCPGLVEIVEHGQLDDHDVVMHTLHQYFDQYDLS 191
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTH+ FR+L P +D ++ R +L
Sbjct: 192 TIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVL 235
>gi|203284025|ref|YP_002221765.1| glutamate racemase [Borrelia duttonii Ly]
gi|201083468|gb|ACH93059.1| glutamate racemase [Borrelia duttonii Ly]
Length = 254
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 13/216 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L++ I+IFDSGIGGL + + + ++IYVAD+ FPYG+ + + + L S +
Sbjct: 4 LEDVIVIFDSGIGGLAYFEYISKKLFNRNYIYVADNKNFPYGDKSSNFILNEFLELISKL 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y V V+ACNTA + ++L FP + L +V +K+ + +++T T
Sbjct: 64 REIYNIVSIVVACNTASISVYNKLNFNFPIIYTLPSVSLVKELLC----KRVILIATNTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + ++ HI L+ + A + ++ I E + + ++ E + +
Sbjct: 120 INSEFVKKEQNN-----HIDLI--LKSAGELVKFVEYGDIFEKDALEYLKSLKFEVQSTK 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D++ L CTHY I + + PV DN +A
Sbjct: 173 RDMVFLGCTHYLHIKDMIESVLEIPV--YDNRKIVA 206
>gi|227875772|ref|ZP_03993900.1| glutamate racemase [Mobiluncus mulieris ATCC 35243]
gi|269977417|ref|ZP_06184389.1| glutamate racemase [Mobiluncus mulieris 28-1]
gi|306819045|ref|ZP_07452762.1| glutamate racemase [Mobiluncus mulieris ATCC 35239]
gi|307700282|ref|ZP_07637322.1| glutamate racemase [Mobiluncus mulieris FB024-16]
gi|227843714|gb|EEJ53895.1| glutamate racemase [Mobiluncus mulieris ATCC 35243]
gi|269934333|gb|EEZ90895.1| glutamate racemase [Mobiluncus mulieris 28-1]
gi|304648238|gb|EFM45546.1| glutamate racemase [Mobiluncus mulieris ATCC 35239]
gi|307614493|gb|EFN93722.1| glutamate racemase [Mobiluncus mulieris FB024-16]
Length = 293
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 14/225 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+ D PYG +K + + +++
Sbjct: 6 IGIFDSGLGGLTVARAIIDQLPGESVVYIGDTANSPYGTKPVETVKHLALNVMDKLVEHG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L VIACNTA + + R+ + P + + PA+ +A + T +G I +++T
Sbjct: 66 VKIL-VIACNTASAAVLFDARARYDRLGIPVLEVIS--PAVHRAVSATHNGKIGVIATST 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + +Y Q V++ + VE GI + + K E K G
Sbjct: 123 TIATGTYQRALGAY-QQVE---VTAQACPAFVEFVERGITSGSELLAKAREYLEPVKAGG 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLL 234
D +VL CTHYPL+ V + V + +S+ AR R LL
Sbjct: 179 -VDTLVLGCTHYPLLTGVINYVMGSEVTLVSSSEETARDVYRTLL 222
>gi|203287567|ref|YP_002222582.1| glutamate racemase [Borrelia recurrentis A1]
gi|201084787|gb|ACH94361.1| glutamate racemase [Borrelia recurrentis A1]
Length = 254
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L++ I+IFDSGIGGL + + + ++IYVAD+ FPYG+ + + + L S +
Sbjct: 4 LEDVIVIFDSGIGGLAYFEYISKKLFNRNYIYVADNKNFPYGDKSSNFILNEFLELISKL 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y V V+ACNTA + ++L FP + L +V +K+ + +++T T
Sbjct: 64 REIYNIVSIVVACNTASISVYNKLNFNFPIIYTLPSVSLVKELVF----KRVILIATNTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + HI L+ + A + ++ I E + + ++ E + +
Sbjct: 120 INSEFVKK-----EQNNHIDLI--LKSAGELVKFVEYGDIFEKDALEYLKSLKFEVQSTK 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D++ L CTHY I + + PV DN +A
Sbjct: 173 RDMVFLGCTHYLHIKDMIESVLEIPV--YDNRKIVA 206
>gi|315573713|gb|EFU85904.1| glutamate racemase [Enterococcus faecalis TX0309B]
gi|315582672|gb|EFU94863.1| glutamate racemase [Enterococcus faecalis TX0309A]
Length = 275
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + + VE + + KK +
Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESN----QYRSSVAKKIV 168
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 222
>gi|29375697|ref|NP_814851.1| glutamate racemase [Enterococcus faecalis V583]
gi|81585411|sp|Q836J0|MURI_ENTFA RecName: Full=Glutamate racemase
gi|29343158|gb|AAO80921.1| glutamate racemase [Enterococcus faecalis V583]
Length = 273
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 64 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 110
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + + VE + + KK +
Sbjct: 111 NKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESN----QYRSSVAKKIV 166
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 167 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLL 220
>gi|228471185|ref|ZP_04055998.1| glutamate racemase [Porphyromonas uenonis 60-3]
gi|228307000|gb|EEK16082.1| glutamate racemase [Porphyromonas uenonis 60-3]
Length = 281
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 27/222 (12%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++++ I +FDSG GGL +L+K+R +P+Y F+Y+ D+ PYG+ H + +
Sbjct: 2 QQIEGPIGVFDSGYGGLTILRKLREQLPQYDFVYLGDNARSPYGSRSMHVVYQFTREAVE 61
Query: 70 DILDKYQPVLSVIACNTAFT-LIKDELRSTFPSM-------AFLGAV-PAIKQAAAYTQS 120
+ D P L ++ACNTA ++ + P + LG + P ++ T +
Sbjct: 62 KLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTGT 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE----- 175
+ IL+T T+ SYV++ H ++ + ++ E +
Sbjct: 121 KHVGILATEGTVSS-------ESYVAEIHKLYPDMTVVQEACPLWVPIVETGESDSPGTD 173
Query: 176 --IKKEIEGCFIEKEGKRTDVIVLACTHYPLIV-HVFRQLSP 214
++K +E + E + D I+L CTHYP+++ + R L+P
Sbjct: 174 FFVRKHLERLLAQDE--KIDTIILGCTHYPILMPKIQRLLTP 213
>gi|169831664|ref|YP_001717646.1| glutamate racemase [Candidatus Desulforudis audaxviator MP104C]
gi|229486275|sp|B1I4X2|MURI_DESAP RecName: Full=Glutamate racemase
gi|169638508|gb|ACA60014.1| glutamate racemase [Candidatus Desulforudis audaxviator MP104C]
Length = 273
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
+ ++ +FDSG+GGL V++++ ++P IY D PYG+ L ++ + FL
Sbjct: 3 KGTVGLFDSGVGGLTVVREVSVILPGKRVIYFGDTAHVPYGDKSVDELLSYAERIIGFLC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
S D + ACNT+ + +R F + +G + P +A + +G I +++
Sbjct: 63 SQGADYI-----IFACNTSSAVSLRLMRDRF-QVPMIGLIEPGAAEAVRLSATGRIGLIA 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ + + + C + ++ L VE E +++ +E + +
Sbjct: 117 TEATVKAGAYARAVSALNRNCQVFSQAAPRLVPLVESGESDTPKAEQAVREYLEP--LRE 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+G D ++L CTHYP + V ++ V +D + + R AR
Sbjct: 175 QG--IDTLILGCTHYPFLRDVIERVLGPEVVLVDPAAATVRAAR 216
>gi|2462086|emb|CAA70886.1| putative glutamate racemase protein [Bacillus cereus ATCC 10987]
Length = 269
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 116/251 (46%), Gaps = 16/251 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD +L VIA NTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLDLNIKML-VIAMNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------ 173
Query: 190 KRTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRV 244
K TD+ ++L CTHYP++ V +Q+ V + + D AR +L +N + +
Sbjct: 174 KNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ- 232
Query: 245 FDDHALFLSGK 255
DH +GK
Sbjct: 233 -SDHLFLTTGK 242
>gi|172037379|ref|YP_001803880.1| glutamate racemase [Cyanothece sp. ATCC 51142]
gi|171698833|gb|ACB51814.1| glutamate racemase [Cyanothece sp. ATCC 51142]
Length = 281
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 14/263 (5%)
Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+++QNS I +FDSG+GGL VL+++ +P+ +Y AD PYGN E + L F+
Sbjct: 2 REIQNSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGNREASEI---LQFVR 58
Query: 69 SDI--LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
+ + + + ++ACNT+ L + +R F + LG + P K AA Q I +
Sbjct: 59 EILVWMTQQNVKMVIMACNTSSALALEAVRQEF-DVPILGVILPGAK--AAVKQGKRIGV 115
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+STPAT + I + + V +E+ + ++ +E +
Sbjct: 116 ISTPATAKSQAYRQAIQEINPEAQVWQVGCPQFVPLIEQNRIW-DVYTKQVAQEYLSPLL 174
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D ++ CTHY + + + + P + +D + + + A+ L + +T
Sbjct: 175 AHD---IDTLIYGCTHYRHLEALIKTIIPPTIKLIDPASYVVQAAKKELELMGLSKTASA 231
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
+SG D R Q G
Sbjct: 232 SPTRFAVSGCSDTFSRLSQQWLG 254
>gi|304385230|ref|ZP_07367575.1| glutamate racemase [Pediococcus acidilactici DSM 20284]
gi|304328437|gb|EFL95658.1| glutamate racemase [Pediococcus acidilactici DSM 20284]
Length = 265
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 15/235 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++ + LMP +++ D+ PYG + K
Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKAAKELMPNEAVVFIGDEARVPYGPRPTAEVIK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+D L K VIACNTA L +T P + +G + P + A A T++
Sbjct: 53 -FSQQMADFLVKKDVKALVIACNTATNAAFQILSTTLP-IPVIGVIQPGAQAAVATTRNN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T T++ S + + Q + V+ E ++ E + I+
Sbjct: 111 RIGVIATEGTIKSQAYSTALAALAPQTEVFPVACQSFVELAEHN----QLTTPEALQVID 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ + + D +VL CTH+PL+ + V +D + ++ + +L R
Sbjct: 167 QQLVGLKNQGIDTLVLGCTHFPLLAKGIQTAVGDQVKLVDPGVAAVQQLKDVLER 221
>gi|257468044|ref|ZP_05632140.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|317062330|ref|ZP_07926815.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688006|gb|EFS24841.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 263
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K +I +FDSG+GG VL+++ L+P + IY D+ PYG + +K+ F D
Sbjct: 2 KKNYNIGVFDSGVGGTTVLKRIIELLPNENIIYYGDNGNAPYG---EKTIKEIQGFCL-D 57
Query: 71 ILDKY---QPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
I+D + VIACNTA LIK+ + T P + + P K A + + I
Sbjct: 58 IMDFFMMNNCKAVVIACNTATAASLELIKE--KYTVPVIGVIS--PGAKSAVEASTNKCI 113
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+LSTP T ++ I Y ++ L +E G + ED ++ I
Sbjct: 114 GVLSTPFTAASNAYADEIAKYSKTAKVYQEGCPELCPMIE---AGWETFED--RETIIKN 168
Query: 184 FIEKEGKRTDVIVLACTHYPL 204
I K + D +VL CTHYP+
Sbjct: 169 HISKFPRNVDTVVLGCTHYPI 189
>gi|227518376|ref|ZP_03948425.1| glutamate racemase [Enterococcus faecalis TX0104]
gi|227074054|gb|EEI12017.1| glutamate racemase [Enterococcus faecalis TX0104]
Length = 275
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 29/234 (12%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG----------NWE--DHAL 60
Q +I + DSG+GGL VL++ +P IY+ D PYG WE D L
Sbjct: 6 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 65
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKR+ L VIACNTA + +E+++ P +P + A T++
Sbjct: 66 KKRIKML-------------VIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKN 112
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T T++ I S + + VE + + KK +
Sbjct: 113 NKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESN----QYRSSVAKKIV 168
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ K D ++L CTHYPL+ V + + V +D+ LL
Sbjct: 169 AETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGNHVTLIDSGAETVGEVSMLL 222
>gi|152976904|ref|YP_001376421.1| glutamate racemase [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152025656|gb|ABS23426.1| glutamate racemase [Bacillus cytotoxicus NVH 391-98]
Length = 267
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 120/262 (45%), Gaps = 14/262 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + ++
Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQ-FTWEMTEY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ P + +G + P + A T + + ++ T
Sbjct: 60 LLALNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTCHVGVIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189
T++ + + S ++ +V S+ VE G E E+ E+ ++ +
Sbjct: 119 TVKSGAYEDALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLKH 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFD 246
D ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 174 TEIDTLILGCTHYPILGPVIKRVMGEKVQLISSGDETAREVSTILYHSKMLNEGEEQ--S 231
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
DH +GK D+ + FG
Sbjct: 232 DHLFLTTGKIDLFKEIASKWFG 253
>gi|259501297|ref|ZP_05744199.1| glutamate racemase [Lactobacillus iners DSM 13335]
gi|302190979|ref|ZP_07267233.1| glutamate racemase [Lactobacillus iners AB-1]
gi|312870760|ref|ZP_07730867.1| glutamate racemase [Lactobacillus iners LEAF 3008A-a]
gi|259167267|gb|EEW51762.1| glutamate racemase [Lactobacillus iners DSM 13335]
gi|311093772|gb|EFQ52109.1| glutamate racemase [Lactobacillus iners LEAF 3008A-a]
Length = 261
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW--EDHAL 60
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119
R F +L K V+ + CNTA ++ P M +G + + AA+ TQ
Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108
Query: 120 SGLISILSTPATLRRTYTSNLIHSYV-------SQCHIHLVSSMILASRVEEYACGIKIK 172
+ +++++T AT+ HSYV +Q + + LA VE
Sbjct: 109 TNQVAVIATNATVNS-------HSYVKEIAFRNAQIQVTELGEPKLAPLVEANPS----- 156
Query: 173 EDEIKKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
D+IKK + C + + D ++L CTHYPL++ + +D +D +A+
Sbjct: 157 -DKIKKAVVAQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTF 215
Query: 232 CLLPRINTHQTRVFDDHALFLSGKP 256
+L R N + H + +G P
Sbjct: 216 NVLKRDNLLAAK-GGKHEYYTTGDP 239
>gi|255530901|ref|YP_003091273.1| glutamate racemase [Pedobacter heparinus DSM 2366]
gi|255343885|gb|ACU03211.1| glutamate racemase [Pedobacter heparinus DSM 2366]
Length = 279
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 27/255 (10%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
SI +FDSG GGL V + + +P+Y++IY D+ PYG+ + + + +
Sbjct: 4 NQSIGVFDSGYGGLTVFKSIASKLPQYNYIYFGDNARTPYGDHSFETIYQYTLECVEWLF 63
Query: 73 DKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ P L ++ACNTA + ++ L +P LG + P + +T S + ++
Sbjct: 64 AQGCP-LVILACNTASAKALRNIQQNVLPFKYPDRRVLGVIRPTAEIVGDFTLSKHVGVM 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ I+ + + + S + +E + +KK I+
Sbjct: 123 GTRGTVNSESYLMEINKFFPEISVSQQSCPMWVPLIENNEHIAAGADYFVKKYIDELL-- 180
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ + D IVLACTHYPL+V + + P ++ L D +A D
Sbjct: 181 AKDNQIDCIVLACTHYPLLVPKIKTILPDHINLLGQDDIVA------------------D 222
Query: 247 DHALFLSGKPDIAMR 261
AL+L P++ R
Sbjct: 223 SLALYLENHPEMTDR 237
>gi|207742838|ref|YP_002259230.1| glutamate racemase (n terminal fragment) protein [Ralstonia
solanacearum IPO1609]
gi|206594232|emb|CAQ61159.1| probable glutamate racemase (n terminal fragment) protein
[Ralstonia solanacearum IPO1609]
Length = 141
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCEW 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + L VIACNTA LR ++ +G P +K A A +QS ++ +L+T +
Sbjct: 64 LVGQGCKAL-VIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHI 150
TLR + L+ + C +
Sbjct: 122 TLRSDKFARLLGNVSGDCQV 141
>gi|119509564|ref|ZP_01628711.1| glutamate racemase [Nodularia spumigena CCY9414]
gi|119465753|gb|EAW46643.1| glutamate racemase [Nodularia spumigena CCY9414]
Length = 297
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 4 DNYPCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
D++ +K+ Q + I +FDSG+GGL VL+++ +P IY D PYG ++
Sbjct: 21 DDHLADKEPQRAPIGVFDSGVGGLTVLRQLYRHLPNESIIYFGDTARLPYG------IRT 74
Query: 63 RLMFL--FSDILDKYQPV---LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAA 116
++ L +IL+ Q + ++ACNT+ L + +R F S+ +G + P K AA
Sbjct: 75 QVEILQYVREILNWMQQQRVKMVIMACNTSSALALEIVRREF-SLPIIGVILPGAK--AA 131
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
Q I +++TPAT + + I + + VS +E+ D
Sbjct: 132 VQQGKRIGVIATPATAKSNAYRHAILEMDANVQVWQVSCPEFVPLIEQNRIN-----DPY 186
Query: 177 KKEIEGCFIEKE-GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC--- 232
E+ ++E + D +V CTHYP + + R L P V +D + + A C
Sbjct: 187 TTEVARSYLEPLIQQEIDTLVYGCTHYPHLAPILRSLLPSQVKLVDPAVHVV--AACTQE 244
Query: 233 --LLPRINTH 240
LL NTH
Sbjct: 245 LELLGLTNTH 254
>gi|302529722|ref|ZP_07282064.1| glutamate racemase [Streptomyces sp. AA4]
gi|302438617|gb|EFL10433.1| glutamate racemase [Streptomyces sp. AA4]
Length = 266
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 14/256 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + L+P YV D PYG ++ + D+++
Sbjct: 8 IGVFDSGVGGLTVARSILELLPAEQLRYVGDTARNPYGPLPIATAREYALAALDDMVESG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-R 134
L VIACNTA + R + +PA ++AA T +G + ++ T T+R R
Sbjct: 68 VKAL-VIACNTASAACLRDARERYDVPVIEVVLPAARRAAVATHTGRVGLIGTEGTVRSR 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++ + + L S + R ++ +I +G D
Sbjct: 127 AYD----DAFAAAPDVRLTS--VACPRFVDFVERGITTGRQILGLAQGYLQPLLEAEVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---HALF 251
++L CTHYPL+ V + + V + ++D A+ +L ++ R D+ H
Sbjct: 181 LILGCTHYPLLSGVLQIVMGQDVTLVSSADETAKDLYRVLTELDLLAER--DEPPKHEFL 238
Query: 252 LSGKPDIAMRRLMQGF 267
+G P+ RL Q F
Sbjct: 239 ATGSPE-PFARLAQRF 253
>gi|298490221|ref|YP_003720398.1| glutamate racemase ['Nostoc azollae' 0708]
gi|298232139|gb|ADI63275.1| glutamate racemase ['Nostoc azollae' 0708]
Length = 284
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 11/262 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++ Q +I +FDSG+GGL VL+++ +P IY D PYG + + + +
Sbjct: 16 DQNSQPAIGVFDSGVGGLTVLRQIYKQLPNESIIYFGDTAHLPYGIRSQAEILQYVREIL 75
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ + + + ++ACNT+ L + +R F LG V P + AA Q I +++
Sbjct: 76 K-WMQQQRVKMVIMACNTSSALALENVRQEF-DFPILGVVLPGAR--AAVQQGKRIGVIA 131
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT + I + VS +E+ D E+ ++E
Sbjct: 132 TPATAKSNAYRQAIMEIQPDVQVWQVSCPEFVPLIEQNRI-----HDPYTTEVAKSYLEP 186
Query: 188 EGKRT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
K+ D +V CTHYP + V L P V +D S + L ++ TR+
Sbjct: 187 LIKQEIDTLVYGCTHYPHLAPVLGALLPSYVKLVDPSVHVVAACAQELDLLSIRNTRLPM 246
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+SG P + +Q G
Sbjct: 247 PTRFAVSGCPQQFAQSGLQWLG 268
>gi|170017584|ref|YP_001728503.1| glutamate racemase [Leuconostoc citreum KM20]
gi|169804441|gb|ACA83059.1| Glutamate racemase [Leuconostoc citreum KM20]
Length = 289
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 6/193 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N I DSG+GGL V+++ + +P FI++ D PYG + + + + +++
Sbjct: 5 NPIGFVDSGVGGLTVIKEAQKQLPNEQFIFIGDTARMPYGPRPTEEVVRYTFQMANYLVE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA + +L+ T ++ +G + P A T++ I I++T T+
Sbjct: 65 QKHIKLLVIACNTATARVLSQLQRTL-AIPVIGVIQPGAWAATKTTKNNRIGIIATQGTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
N IH++ I + VE K E + + + +
Sbjct: 124 DSGAYDNEIHAFRDDVQITSQAEPEFVQLVESN----KYHEAATRNIVSQHLEHMKSQDV 179
Query: 193 DVIVLACTHYPLI 205
D ++L CTH+PL+
Sbjct: 180 DTLILGCTHFPLL 192
>gi|323351014|ref|ZP_08086671.1| glutamate racemase [Streptococcus sanguinis VMC66]
gi|322122738|gb|EFX94447.1| glutamate racemase [Streptococcus sanguinis VMC66]
Length = 264
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + K++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNEL-----HSSLTKKVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ + D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 166 YETLQPLAGQVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|270290961|ref|ZP_06197184.1| glutamate racemase [Pediococcus acidilactici 7_4]
gi|270280357|gb|EFA26192.1| glutamate racemase [Pediococcus acidilactici 7_4]
Length = 265
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++ + LMP +++ D+ PYG + K
Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKAAKELMPNEAVVFIGDEARVPYGPRPTAEVIK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+D L K VIACNTA L +T P + +G + P + A A T++
Sbjct: 53 -FSQQMADFLVKKDVKALVIACNTATNAAFQILSTTLP-IPVIGVIQPGAQAAVATTRNN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T T++ S + + Q + V+ E ++ E + I+
Sbjct: 111 RIGVIATEGTIKSQAYSTALAALAPQTEVFPVACQSFVELAEHN----QLTTPEALQVID 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205
+ + + D +VL CTH+PL+
Sbjct: 167 QQLVGLKNQGIDTLVLGCTHFPLL 190
>gi|293401254|ref|ZP_06645398.1| glutamate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305380|gb|EFE46625.1| glutamate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 239
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 4/232 (1%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
+L+++R MP+ ++Y D PYG E + +R + + ++ + VIACNTA
Sbjct: 1 MLKELRRWMPKERYLYFGDSAFAPYGEKERDIITQRCLHICDKLVHIGVKAI-VIACNTA 59
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
+ +ELR +P + +G PA+K A + + +++T TL+ +L+ Y Q
Sbjct: 60 TSACVEELRKRYPQLPIVGMEPALKPAVEGKEHQQVIVMATHFTLKEKKFEHLMSRYRKQ 119
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
I+ + + L VE ++K ++ + D IVL CTH+
Sbjct: 120 HCIYKLPTPKLVEIVEHDQLE---NTTLVEKTLQDYLAPYDLSHIDSIVLGCTHFVFFKE 176
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA 259
R + V +D + +R + LL NT Q L+ D A
Sbjct: 177 QIRHIVKDKVTLVDGNAGTSRHVKELLSEKNTLQKESGHAKVTILNSSDDPA 228
>gi|312792765|ref|YP_004025688.1| glutamate racemase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179905|gb|ADQ40075.1| glutamate racemase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 267
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K
Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+
Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDIPIVAVIE--PGAEAAVRATKNKRIGVIGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191
I S + + VEE G KE + KE F EKE
Sbjct: 123 SGAFEKKILELDSSLQVFSKPCPLFVPLVEE---GWTDKEVTYLVAKEYLEEFNEKE--- 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
D +VL CTHYP + V +++ P
Sbjct: 177 IDTLVLGCTHYPFLQDVIKKVLP 199
>gi|312885977|ref|ZP_07745605.1| glutamate racemase [Mucilaginibacter paludis DSM 18603]
gi|311301514|gb|EFQ78555.1| glutamate racemase [Mucilaginibacter paludis DSM 18603]
Length = 276
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 9/219 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL V + + L+P+Y +IY+ D+ PYG+ + + +
Sbjct: 7 IGVFDSGYGGLTVFRSIAKLLPQYDYIYLGDNSRAPYGSRSFKTIHQYTWECVQHLFKMG 66
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
P L ++ACNTA T+ + +L+ S LG + P + Y+++ I +L T
Sbjct: 67 CP-LVILACNTASAKALRTIQQHDLKKHDSSKRVLGVIRPTAEVIGNYSKTKEIGVLGTK 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I ++ +++ + + +E + +K+ ++ I +
Sbjct: 126 GTVQSGSYQIEIGNFFPDVNVYQQACPLWVPLIENGEYDKPGADYFVKQYLDQ--ILAQS 183
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
R D ++LACTHYPL+ R P V + D +A+
Sbjct: 184 PRIDTLLLACTHYPLLEQKIRAYLPADVQAVSQGDIVAQ 222
>gi|309803584|ref|ZP_07697676.1| glutamate racemase [Lactobacillus iners LactinV 11V1-d]
gi|309806029|ref|ZP_07700055.1| glutamate racemase [Lactobacillus iners LactinV 03V1-b]
gi|312872868|ref|ZP_07732930.1| glutamate racemase [Lactobacillus iners LEAF 2062A-h1]
gi|312873716|ref|ZP_07733761.1| glutamate racemase [Lactobacillus iners LEAF 2052A-d]
gi|325913753|ref|ZP_08176114.1| glutamate racemase [Lactobacillus iners UPII 60-B]
gi|308164332|gb|EFO66587.1| glutamate racemase [Lactobacillus iners LactinV 11V1-d]
gi|308167632|gb|EFO69785.1| glutamate racemase [Lactobacillus iners LactinV 03V1-b]
gi|311090714|gb|EFQ49113.1| glutamate racemase [Lactobacillus iners LEAF 2052A-d]
gi|311091602|gb|EFQ49984.1| glutamate racemase [Lactobacillus iners LEAF 2062A-h1]
gi|325476953|gb|EGC80104.1| glutamate racemase [Lactobacillus iners UPII 60-B]
Length = 261
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW--EDHAL 60
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119
R F +L K V+ + CNTA ++ P M +G + + AA+ TQ
Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108
Query: 120 SGLISILSTPATLRRTYTSNLIHSYV-------SQCHIHLVSSMILASRVEEYACGIKIK 172
+ +++++T AT+ HSYV +Q + + LA VE
Sbjct: 109 TNQVAVIATNATVNS-------HSYVKEIAFRNAQIQVTELGEPKLAPLVEANPS----- 156
Query: 173 EDEIKKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
D+IKK + C + + D ++L CTHYPL++ + +D +D +A+
Sbjct: 157 -DKIKKAVVAQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTF 215
Query: 232 CLLPRINTHQTRVFDDHALFLSGKP 256
+L R N + H + +G P
Sbjct: 216 NVLKRDNLLAEK-GGKHEYYTTGDP 239
>gi|114566002|ref|YP_753156.1| glutamate racemase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336937|gb|ABI67785.1| glutamate racemase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 267
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 7/209 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V++ + MP+ FIY D PYGN + L + S ++ K
Sbjct: 7 IGIFDSGVGGLTVVKSLMEKMPDESFIYFGDTAHVPYGNKSEQQLFNYAHKIISFLISKQ 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
+ ++AC T ++ + + S+ LG V A + AA +++G I + +T AT+ +
Sbjct: 67 VKAI-IVACGTHSSVTLPSVLQEY-SLPMLGVVKAGARSAARLSRNGKIGVAATQATVNK 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ I ++ + VE K+ E ++ + + D
Sbjct: 125 KAYTREIQELEPDFQVYETACPRFVPLVE----AGKLNNSESREAVAEYLGPLLAQGIDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
+VL CTHYP + + + ++ +D S
Sbjct: 181 LVLGCTHYPFLATAISEFAGEKLELVDTS 209
>gi|172041148|ref|YP_001800862.1| glutamate racemase [Corynebacterium urealyticum DSM 7109]
gi|171852452|emb|CAQ05428.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 288
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 7 PCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P ++ N+ I IFDSG+GGL V + + L+P IY+ D PYG+ +++
Sbjct: 15 PEQESHNNAPIGIFDSGVGGLTVARTIVDLLPHESIIYIGDTANSPYGDKTIAQVREYAR 74
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ +++ + ++ VIACNTA + R +P +PA+++A + +++ I +
Sbjct: 75 MVADELVARGVKMI-VIACNTASAAFMRDARERYPIPVVEVILPAVRRAVSASRNNRIGL 133
Query: 126 LSTPATLRRTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ T AT+ +L + + C + V I + R +I
Sbjct: 134 IGTQATVTSGAYQDLFAASPDVTAVAQACPQFVPFVERGITSGR-------------QIH 180
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
EG + D +VL CTHYPL+ V + + V +++++ A+
Sbjct: 181 ALAEGYLEPLKEAGVDTVVLGCTHYPLLTGVVQFVMGEDVTLVNSAEETAK 231
>gi|332974650|gb|EGK11567.1| glutamate racemase [Kingella kingae ATCC 23330]
Length = 270
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 7/215 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ Q I +FDSG+GGL V++ + +P + +Y D PYG + +++ +
Sbjct: 4 QRKQKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTIEEFTTQIVE 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILST 128
+L L VIACNT + +++ ++ L + A QAA A T++ I +++T
Sbjct: 64 FLLQNEVKAL-VIACNTIAAVAYKKVQQMAGNIPVLSVIEAGAQAALATTRNNHIGVIAT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + IH+ I ++ +L VEE ++ I + ++ ++
Sbjct: 123 STTVNSNAYARAIHAQNPDTRILSQATPLLVPLVEEGWLDHEVTRLTIHEYLKPLLADQ- 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
D ++L CTH+PL+ + +P+ ++ +D+S
Sbjct: 182 ---IDTLILGCTHFPLLKAAIKHEAPY-IELVDSS 212
>gi|332710932|ref|ZP_08430868.1| glutamate racemase [Lyngbya majuscula 3L]
gi|332350246|gb|EGJ29850.1| glutamate racemase [Lyngbya majuscula 3L]
Length = 298
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 9/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL VL+++ +P IY AD PYG + + + S ++
Sbjct: 16 SPIGIFDSGVGGLTVLRELYKQLPSESIIYFADTARLPYGTRSTDEIVQFGFEILSWMVQ 75
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ ++ V+ACNT+ L + LRS F + LG + P + AA Q I +++TPAT
Sbjct: 76 QDVKMV-VMACNTSSALALETLRSEF-DIPMLGLILPGAR--AALHQGRRIGVIATPATA 131
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
N I + V VE+ ++ +E +
Sbjct: 132 ASNAYRNAILEVEPTAQVWQVGCPEFVPLVEQNRLCEPYTTAVARQYLEPLL----AAQI 187
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHYP + + R++ P V +D + + A L I T +
Sbjct: 188 DTLVYGCTHYPHLEPILREILPPDVKLVDPAKYVVAAAAQELDLIGGKNTGEARPTRFGV 247
Query: 253 SGKPDIAMRRLMQGFG 268
SG P ++ +Q G
Sbjct: 248 SGCPQQFAQQSLQWLG 263
>gi|325280786|ref|YP_004253328.1| Glutamate racemase [Odoribacter splanchnicus DSM 20712]
gi|324312595|gb|ADY33148.1| Glutamate racemase [Odoribacter splanchnicus DSM 20712]
Length = 278
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 48/285 (16%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ SI +FDSG GGL +L+++ +PEY+++Y+ D+ PYG + + +
Sbjct: 5 KESIGVFDSGYGGLTILKEIVRKLPEYNYVYLGDNARAPYGARSFEVVYEYTREAVHKLF 64
Query: 73 DKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ + L ++ACNTA T+ + +L P LG + P+++ Y+Q+G + IL
Sbjct: 65 E-MECRLVILACNTASAKALRTIQQVDLPQWDPEKRVLGVIRPSVEALNTYSQNGHVGIL 123
Query: 127 STPATLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEG 182
+T T+ +Y + Y + R+ + AC + ++ +E+ E
Sbjct: 124 ATRGTVASGSYPIEVGKLYGEE-----------RFRITQLACPMWVPLVENNELDGEGAI 172
Query: 183 CFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPV--------------DWLD 221
F+ K D I+L CTHYPL+ + + P V D+L
Sbjct: 173 YFVRKYIQELLGTDPEIDTIILGCTHYPLLRPLIARFVPSRVKIIGQGQIVAGSLADYLK 232
Query: 222 NSDSIARRARCLLPR--INTHQTRVFDDHA-LFLSGKPDIAMRRL 263
I RR R + T +T +FD A LFL K +I+ +R+
Sbjct: 233 RHPEIDRRLGKDSRRSYLTTEKTELFDRMAGLFL--KEEISSQRI 275
>gi|297568262|ref|YP_003689606.1| glutamate racemase [Desulfurivibrio alkaliphilus AHT2]
gi|296924177|gb|ADH84987.1| glutamate racemase [Desulfurivibrio alkaliphilus AHT2]
Length = 267
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V + + +P+Y +Y D PYG+ + + +L +
Sbjct: 2 IGVFDSGVGGMTVARAIEQALPDYRLVYFGDLARTPYGSKSSDTISRYSCQNVDFLLSRG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACN+A ++ LR+ + F PA+ QAA ++ G + ++ T AT+R
Sbjct: 62 AKII-VVACNSAASVAAANLRAAYDLPIFEVIGPAVAQAARFSSRGRVGVIGTRATIRSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ + C + + +L VEE + + E K + + ++ D +
Sbjct: 121 VYEQLLQQQNAGCRVFSAACPLLVPLVEEG----WLDKRETKMILRRYLAPLKQQQVDTL 176
Query: 196 VLACTHYPLI 205
VL CTHYPL+
Sbjct: 177 VLGCTHYPLL 186
>gi|289809548|ref|ZP_06540177.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 169
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 108 VPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167
+PAIK AA T +G++ +L+T AT++R YT LI + ++C I ++ S L E
Sbjct: 1 MPAIKPAARLTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLH 60
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
G + +E+++ + E D +VL CTH+PL+ Q+ P +D+ +IA
Sbjct: 61 GDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIA 118
Query: 228 RRARCLL 234
RR LL
Sbjct: 119 RRTAWLL 125
>gi|226941421|ref|YP_002796495.1| glutamate racemase [Laribacter hongkongensis HLHK9]
gi|226716348|gb|ACO75486.1| MurI [Laribacter hongkongensis HLHK9]
Length = 272
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 16/217 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE----DHALKKRLMFLF 68
+ I +FDSGIGGL V++ + +P +Y D PYG H ++ FL
Sbjct: 6 RRPIGVFDSGIGGLTVVRALMDRLPFEDILYFGDSARVPYGTKSVATIQHYTREIAEFLL 65
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA--FLGAVPAIKQAA-AYTQSGLISI 125
+ + +IACNT + D +RS + L + A QAA A ++SG I +
Sbjct: 66 ARDVKAL-----IIACNTMAAVAADVVRSVAEPLGVPVLDVIDAGSQAAVAASRSGEIGV 120
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
++TP T+ + IH Q ++ + + VEE + ++ ++ +
Sbjct: 121 IATPTTINANAYARAIHVMNPQARLYSQACPLFVPLVEEGWLDHPVTRLTAEEYLKTVLV 180
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
E+ D +VL CTHYPL+ + ++ V +D+
Sbjct: 181 EE----VDTLVLGCTHYPLLKPLLADVAGPGVQLVDS 213
>gi|50913675|ref|YP_059647.1| glutamate racemase [Streptococcus pyogenes MGAS10394]
gi|68052498|sp|Q5XDP9|MURI_STRP6 RecName: Full=Glutamate racemase
gi|50902749|gb|AAT86464.1| Glutamate racemase [Streptococcus pyogenes MGAS10394]
Length = 264
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + +
Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E+++T + LG V P A T G + ++ TP T
Sbjct: 69 I-VFACNTATAVAWEEVKATL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190
+ S + + I L++ + +V AC + I E I K+I +
Sbjct: 121 ---VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVG 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246
+ D +VL CTHYPL+ + + + V +D+ R LL N HQ V
Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232
Query: 247 DHALFLSGKPDI 258
+H F + P+I
Sbjct: 233 EHRFFTTANPEI 244
>gi|186682253|ref|YP_001865449.1| glutamate racemase [Nostoc punctiforme PCC 73102]
gi|186464705|gb|ACC80506.1| glutamate racemase [Nostoc punctiforme PCC 73102]
Length = 288
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 18/246 (7%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+D++ + + I IFDSG+GGL VL+++ +P +Y D PYG +
Sbjct: 10 NLDDFSALEPQRAPIGIFDSGVGGLTVLRQIYRQLPNESIVYFGDTARLPYGIRSQAEIL 69
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
+ + + L + Q + ++ACNT+ L + +R F ++ LG + P K AA +
Sbjct: 70 QFTREILT-WLQQQQVKMVIMACNTSSALALETVRQEF-NIPILGVILPGAK--AAVQEG 125
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +++TPAT + + I + V +E+ D E+
Sbjct: 126 KRIGVIATPATAKSNAYKHAILEIAPDVQVWQVGCPEFVPLIEQNRI-----HDPYTAEV 180
Query: 181 EGCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-----LL 234
++E + D +V CTHYP + V R L P V +D + + A C LL
Sbjct: 181 ARAYLEPLLEQEIDTLVHGCTHYPHLTPVLRSLLPSQVKLVDPAVHVV--AACAQELDLL 238
Query: 235 PRINTH 240
NTH
Sbjct: 239 GLKNTH 244
>gi|332528172|ref|ZP_08404203.1| aspartate and glutamate racemase:glutamate racemase [Rubrivivax
benzoatilyticus JA2]
gi|332112743|gb|EGJ12536.1| aspartate and glutamate racemase:glutamate racemase [Rubrivivax
benzoatilyticus JA2]
Length = 247
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 7/241 (2%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
+L+ +R +P F+YVAD PYG+ L R + + + L V+ACNT
Sbjct: 1 MLRALRARLPAERFVYVADSGHAPYGDRPRPYLLGRAGAVAGFFVAQRAKAL-VLACNTI 59
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
+ + LR+ ++ + PAIK A A T+SG++ +L+T AT+ L + +
Sbjct: 60 SVVAAETLRAHH-ALPIVAMEPAIKPAVAATRSGIVLVLATTATVHSPAVERLCRIWGRE 118
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
I L L +E+ + + + +E D++VL CTHY +
Sbjct: 119 VEILLQPCPGLVELIEQG----RFADPATRTLLERYLRPALDAGADMVVLGCTHYAFVQD 174
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
R+L+ V ++ SD++AR+ L + SG P+ A+RR ++
Sbjct: 175 EIRRLAGAAVQVIEPSDAVARQLVHRLGPALAPAGAAGASTCYYSSGDPE-ALRRFLELM 233
Query: 268 G 268
G
Sbjct: 234 G 234
>gi|163942231|ref|YP_001647115.1| glutamate racemase [Bacillus weihenstephanensis KBAB4]
gi|163864428|gb|ABY45487.1| glutamate racemase [Bacillus weihenstephanensis KBAB4]
Length = 267
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 116/250 (46%), Gaps = 16/250 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + +
Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
LD +L VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 61 LDLNIKML-VIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ + ++ VE ++ + +++ ++ K
Sbjct: 119 TVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL------K 172
Query: 191 RTDV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVF 245
TD+ ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 173 STDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQ-- 230
Query: 246 DDHALFLSGK 255
DH +GK
Sbjct: 231 SDHLFLTTGK 240
>gi|116750432|ref|YP_847119.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
gi|116750474|ref|YP_847161.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
gi|116699496|gb|ABK18684.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
gi|116699538|gb|ABK18726.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
Length = 275
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 115/257 (44%), Gaps = 11/257 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++I +FDSGIGGL V++ + +P IY D PYG + K ++ L
Sbjct: 13 NSAIGVFDSGIGGLTVVRALMERLPFESIIYFGDTARVPYGVKSVDTISK-FAGEITEFL 71
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Q L ++ACNT + ++ + P A T++ + ++ TPAT+
Sbjct: 72 LRQQVKLLIVACNTMAAVAREVIVGLSPVPVLDVIDAGASSAVEATRARYVGVIGTPATI 131
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + + I + + VEE + ++ + +
Sbjct: 132 NSNAYARAIHRHDAGIRIFSQACPLFVPLVEEGWLDHPVTRLTAREYLRPVTTHQ----I 187
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
D +VL CTHYPL+ + +++ + +D+++++A R +L ++ +++ D+ F
Sbjct: 188 DTLVLGCTHYPLLKPLLQKVVGKDIHLVDSAEAMAERTAAVLTEMDLWNRSASPPDYRFF 247
Query: 252 LSGKPDIAMRRLMQGFG 268
+S D+ +R QG G
Sbjct: 248 VS---DVPLR--FQGIG 259
>gi|126436408|ref|YP_001072099.1| glutamate racemase [Mycobacterium sp. JLS]
gi|126236208|gb|ABN99608.1| glutamate racemase [Mycobacterium sp. JLS]
Length = 280
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 7/189 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++++
Sbjct: 14 IFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDDLVERGVK 73
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
L VIACNTA + + R + ++ + + PA+++A A T++G I ++ T AT+
Sbjct: 74 AL-VIACNTASSACLRDARERYAPVSVVEVILPAVRRAVATTRNGRIGVIGTAATI---A 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ ++ + I ++ + R ++ ++ EG + D +V
Sbjct: 130 SGAYQDAFAAARDIEVIG--VACPRFVDFVERGVTSGRQVLGLAEGYLEPLQRADVDTLV 187
Query: 197 LACTHYPLI 205
L CTHYP++
Sbjct: 188 LGCTHYPML 196
>gi|209524014|ref|ZP_03272566.1| glutamate racemase [Arthrospira maxima CS-328]
gi|209495686|gb|EDZ95989.1| glutamate racemase [Arthrospira maxima CS-328]
Length = 284
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLF 68
K I IFDSG+GGL VL+++ +P +Y AD PYG + + R + +
Sbjct: 5 KRGQKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITW 64
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ D + ++ACNT+ L + +RS F + LG + P + AA +Q I +++
Sbjct: 65 AVAQDVK---MVLMACNTSSALALEVVRSEF-DIPILGLILPGSR--AAISQGERIGVIA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY----ACGIKIKEDEIKKEIEGC 183
TPAT I + V +E+ C +++ + + I+
Sbjct: 119 TPATAASNAYRQAIQEINPAVQVWQVGCPAFVPLIEQNRIHDPCTLEVAREYLAPLIQ-- 176
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
+R D ++ CTHYP + V R L P V +D
Sbjct: 177 ------QRIDTLIYGCTHYPHLAPVLRSLLPASVKLVD 208
>gi|269123416|ref|YP_003305993.1| glutamate racemase [Streptobacillus moniliformis DSM 12112]
gi|268314742|gb|ACZ01116.1| glutamate racemase [Streptobacillus moniliformis DSM 12112]
Length = 256
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI IFDSG+GG+ VL ++R P+ + D PYG + K + +L K
Sbjct: 2 SIGIFDSGMGGITVLNEIRKQYPKLDIHFFGDTARLPYGEKSKEEIIKYSTEIVEFLLTK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR- 133
+ L V+ACNTA +L DE++ + ++ +G + A +S + +++T AT+
Sbjct: 62 -EVELIVVACNTATSLALDEIKEKY-NINIIGVIEAGVNGVINNKSKNVGLIATTATVNS 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK------ 187
+ YT +L + V+S I ++ E AC + + E I G +I +
Sbjct: 120 KKYTQSL----------NFVNSQI---KIIERACPLLVPTIE-NGNINGAYINELINEYV 165
Query: 188 --EGKRTDVIVLACTHYPLIVHVFRQL 212
K D ++L CTHY ++ + L
Sbjct: 166 NHMSKEIDTLILGCTHYSILKETIKSL 192
>gi|158333794|ref|YP_001514966.1| glutamate racemase [Acaryochloris marina MBIC11017]
gi|158304035|gb|ABW25652.1| glutamate racemase [Acaryochloris marina MBIC11017]
Length = 264
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 31/247 (12%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL--DKYQPV-L 79
+GGL VL++++ +P F+Y D PYG + ++ IL QP+ +
Sbjct: 1 MGGLTVLKELQQQLPNESFLYFGDTANVPYGTRS----QAEILGFVRQILCWMTSQPIKM 56
Query: 80 SVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTS 138
+++ACNT+ L DE+R+ F + LG + P + AA Q I +++TPAT+
Sbjct: 57 AIMACNTSSALALDEVRAEF-DIPILGIILPGAR--AAVKQGKRIGVIATPATV------ 107
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACG--------IKIKEDEIKKEIEGCFIEKEGK 190
S+ + + + ++V + AC +I+E E + + +
Sbjct: 108 ------ASESYPQAIQEVNTTAKVFQEACPEFVPLIEHNRIREPETLQIVHQHLHPLLQQ 161
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +V CTHYP + V RQ+ P V +D + I A+ L +
Sbjct: 162 GIDTLVYGCTHYPHLSGVIRQVLPSHVKTVDPAVYITTAAKQELKLLQLQNGHAAQTTRF 221
Query: 251 FLSGKPD 257
F+SG P+
Sbjct: 222 FVSGCPE 228
>gi|332978147|gb|EGK14883.1| glutamate racemase [Desmospora sp. 8437]
Length = 206
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 8/204 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
++I I DSG+GGL V++++ +P +Y D + PYG + +R L
Sbjct: 9 SAIGILDSGVGGLTVVREVFRQLPNEKILYFGDTLRCPYGPRSSDEV-RRFTLEIVRHLS 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
Y VIACNTA L +E+R + LG + P + A ++ G + ++ T T+
Sbjct: 68 GYPLKALVIACNTATALALEEVRHQV-DVPVLGVIEPGARAAIKVSRRGRVGVIGTEGTI 126
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + + ++ + L VE ++ +E +K + + R
Sbjct: 127 RSSAYERALKRIDPRLYVVSLPCPALVPLVESGG----VENEESRKILRESLAPLKSHRL 182
Query: 193 DVIVLACTHYPLIVHVF-RQLSPW 215
+ ++L CTHYPLI + R++ P
Sbjct: 183 ESLILGCTHYPLIASMISREMGPG 206
>gi|315653048|ref|ZP_07905976.1| glutamate racemase [Lactobacillus iners ATCC 55195]
gi|315489583|gb|EFU79217.1| glutamate racemase [Lactobacillus iners ATCC 55195]
Length = 261
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW--EDHAL 60
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119
R F +L K V+ + CNTA ++ P M +G + + AA+ TQ
Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108
Query: 120 SGLISILSTPATLRRTYTSNLIHSYV-------SQCHIHLVSSMILASRVEEYACGIKIK 172
+ +++++T AT+ HSYV +Q + + LA VE
Sbjct: 109 TNQVAVIATNATVNS-------HSYVKEIAFRNAQIQVTELGEPKLAPLVEANPS----- 156
Query: 173 EDEIKKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
D+IKK + C + + D ++L CTHYPL++ + +D +D +A+
Sbjct: 157 -DKIKKAVVAQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTF 215
Query: 232 CLLPRINTHQTRVFDDHALFLSGKP 256
+L R N + H + +G P
Sbjct: 216 NVLKRDNLLGEK-GGKHEYYTTGDP 239
>gi|255659131|ref|ZP_05404540.1| glutamate racemase [Mitsuokella multacida DSM 20544]
gi|260848578|gb|EEX68585.1| glutamate racemase [Mitsuokella multacida DSM 20544]
Length = 260
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 16/219 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSGIGGL VL ++P+ F++ AD+ PYG +K + F D L
Sbjct: 2 KIAFFDSGIGGLSVLHHAMRVLPKEQFVFYADEDNVPYGVKTTDEVKGFVQQAF-DFLVG 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA ++ E+R + + +G PA K+A + + +TP T+
Sbjct: 61 CDVKAIVVACNTATSVAVREMRHRY-DIPIIGMEPAAKKALDLDGEHRVLVAATPITVHG 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR--- 191
LI + HLV + L R+ E+A + +E + E ++ +E R
Sbjct: 120 KKMQILIDRFDKD---HLVDLLPL-PRLVEFA-----EREEFRSEAVHAYLAQELGRFHL 170
Query: 192 --TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTH+ R++ P + ++D ++ R
Sbjct: 171 ADYSALVLGCTHFNYFKDTMREIMPENMHFVDGNEGTVR 209
>gi|25011689|ref|NP_736084.1| glutamate racemase [Streptococcus agalactiae NEM316]
gi|77407235|ref|ZP_00784198.1| glutamate racemase [Streptococcus agalactiae H36B]
gi|77414377|ref|ZP_00790532.1| glutamate racemase [Streptococcus agalactiae 515]
gi|29839529|sp|Q8E3V7|MURI_STRA3 RecName: Full=Glutamate racemase
gi|24413229|emb|CAD47308.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159567|gb|EAO70723.1| glutamate racemase [Streptococcus agalactiae 515]
gi|77174157|gb|EAO77063.1| glutamate racemase [Streptococcus agalactiae H36B]
Length = 264
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 14/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I DSG+GGL V+++M +PE I++ D PYG +++ + + +L K
Sbjct: 6 IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLTKN 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
++ VIACNTA + E++ + LG + P A T SG + I+ TP T++
Sbjct: 66 VKMI-VIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNSGKVGIIGTPMTVKS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I + + ++ VE ++ KK + GK D
Sbjct: 124 DAYRQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKVVYETLSPLVGK-LDT 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHALFL 252
++L CTHYPL+ + + + V +D+ R LL IN + H +
Sbjct: 179 LILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHFYT 238
Query: 253 SGKP----DIAMRRLMQ 265
+ P +IA + L Q
Sbjct: 239 TASPKGFKEIAEQWLSQ 255
>gi|260905616|ref|ZP_05913938.1| glutamate racemase [Brevibacterium linens BL2]
Length = 268
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 35 LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94
L P I D PYG+ AL+ R + + +L ++P VIACNTA +
Sbjct: 23 LAPHADLILAMDPDFTPYGSLSPEALEARALN-SAAVLAAWEPDAIVIACNTASVQALET 81
Query: 95 LRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV 153
+R+ + P + +G VPA+K AA Q +I +TPAT Y NLI ++ ++ + V
Sbjct: 82 VRARYEPDIPVIGTVPAVKMAAGTGQD--FAIWATPATTGSAYQQNLIDTFAAEVAVSPV 139
Query: 154 SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
+ LA + E I I+ +++ + IVL CTHY L+
Sbjct: 140 ACPGLAEAINEADIAT------IDSAIDAA-LDQMDPGMETIVLGCTHYGLVAERIMAAR 192
Query: 214 PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
+ D+ +A++ L RI D H + G+PD
Sbjct: 193 AGAITLFDSPIPVAKQ---TLRRIG------IDAHGVG-PGQPD 226
>gi|218782867|ref|YP_002434185.1| glutamate racemase [Desulfatibacillum alkenivorans AK-01]
gi|218764251|gb|ACL06717.1| glutamate racemase [Desulfatibacillum alkenivorans AK-01]
Length = 264
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL V + + L P + Y D PYG + + + +LD+
Sbjct: 2 IGIFDSGIGGLTVARAVMELFPHLNICYFGDTARTPYGTKSKDTVTRYAVENTRFLLDQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA + LR F F PA+ A + ++ I ++ T T+
Sbjct: 62 AKII-VVACNTASAVAVPTLRERFDVPIFEVISPAVDMALSLAKAKRIGVIGTRGTINSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI + + +L S VEE +K+ E + ++ + ++ +
Sbjct: 121 IYERLIKERDPERKVFSEPCPLLVSLVEEGW----LKKPETRMIVKKYLHPLKAQQIQSL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+L CTHYP+I + + V +D+S++++
Sbjct: 177 ILGCTHYPIIKQLIARKIGKRVKIVDSSEAVS 208
>gi|307325961|ref|ZP_07605160.1| Glutamate racemase [Streptomyces violaceusniger Tu 4113]
gi|306888453|gb|EFN19440.1| Glutamate racemase [Streptomyces violaceusniger Tu 4113]
Length = 259
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L MR L P+ + +D P+G + + L + ++P
Sbjct: 1 MDSGIGLLPTAAAMRRLRPDADLLLSSDPATMPWGPRTPEDVTE-LALGCARAAAAHRPD 59
Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++ACNTA LR+ P + +G VPAIK AAA G I+I +TPAT Y
Sbjct: 60 ALIVACNTASVHALPALRAELEPVLPVVGTVPAIKPAAA--GGGPIAIWATPATTGSPYQ 117
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + + V LA V+ +DE + + +VL
Sbjct: 118 RGLIRDFADGVEVTEVPCPGLADAVQH-------ADDEGIDAAVAAAAARTPREVTTVVL 170
Query: 198 ACTHYPLIVHVFR 210
CTHY L+ R
Sbjct: 171 GCTHYELVADRIR 183
>gi|294501442|ref|YP_003565142.1| glutamate racemase [Bacillus megaterium QM B1551]
gi|294351379|gb|ADE71708.1| glutamate racemase [Bacillus megaterium QM B1551]
Length = 264
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 26/258 (10%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + +
Sbjct: 1 MSRPIGVIDSGVGGLTVAKEIMRQLPKEQIMYIGDTARCPYGPRPSEEVRAFTWEMTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ K +L VIACNTA ++ DE++ + +G + P + A T++ I ++ T
Sbjct: 61 VGKDIKML-VIACNTATAVVLDEIQEQL-DIPVIGVIEPGSRAALKVTKNHKIGVIGTNG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ SQ + H + ++ VE AC + + E EG ++ K
Sbjct: 119 TVK------------SQAYTHALRALHTRVEVENLACPLFVPLVE-SGNYEGPEAQRIVK 165
Query: 191 RT---------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
T D ++L CTHYPL+ V ++ V + + + A +L N
Sbjct: 166 ETLKPFYHTDMDTLILGCTHYPLLKPVIQEAIGPRVQLISSGEETAIEVSAILSYSNLLA 225
Query: 242 TRVFD-DHALFLSGKPDI 258
R + +H F +G ++
Sbjct: 226 PRNMEPEHYFFTTGSTEL 243
>gi|23016272|ref|ZP_00056030.1| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1]
Length = 273
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 6/214 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R +P+ IY+ D PYG + + + L Y
Sbjct: 9 IGIFDSGVGGLTVLKAVRERLPDESLIYLGDTARLPYGTKSAQTVAAYALEA-TRALVAY 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
++A NT+ + +R+ FP + +G V P AA + G I +++T + ++
Sbjct: 68 GIKALLVADNTSSAHALEAVRAAFPGLPVIGVVEPGAAAAATASARGRIVVIATESAVQA 127
Query: 135 -TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+Y ++HS + L + + VEE I E + + F E D
Sbjct: 128 GSYPRAILHSRPNALVTQLPCPLFV-PMVEEGLVDGPIAEQIARHYLGPLFTGPEA--AD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
++L CTH+P + +FR+L V +D++ + A
Sbjct: 185 CLLLGCTHFPALAPLFRRLLGRDVAVVDSASTTA 218
>gi|319745525|gb|EFV97827.1| glutamate racemase [Streptococcus agalactiae ATCC 13813]
Length = 290
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 22/272 (8%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+K+D+ P I DSG+GGL V+++M +PE I++ D PYG +
Sbjct: 25 IKMDSRP--------IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQI 76
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
++ + + +L K ++ VIACNTA + E++ + LG + P A T
Sbjct: 77 REFTWQMVNFLLTKNVKMI-VIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTN 134
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SG + I+ TP T++ I + + ++ VE ++ KK
Sbjct: 135 SGKVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKV 190
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RI 237
+ GK D ++L CTHYPL+ + + + V +D+ R LL I
Sbjct: 191 VYETLSPLVGK-LDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEI 249
Query: 238 NTHQTRVFDDHALFLSGKP----DIAMRRLMQ 265
N + H + + P +IA + L Q
Sbjct: 250 NHNWQNKHGGHHFYTTASPKGFKEIAEQWLSQ 281
>gi|148272474|ref|YP_001222035.1| glutamate racemase [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
gi|147830404|emb|CAN01339.1| murI [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 294
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 14/194 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + L+P Y+ D PYG+ +++ + + D++++
Sbjct: 6 IGIFDSGVGGLTVARAVATLLPRESITYIGDTAHTPYGDKPIADVRRYALAVLDDLVERG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134
+L VIACNTA + + R + PA++ A + T++ + +++T AT+ R
Sbjct: 66 VKML-VIACNTASAAMLRDARERYDIPVVEVIQPAVRTAVSVTRNHRVGVIATHATVTSR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKR 191
Y ++ + H+ L S + ++ ++ E+ EG
Sbjct: 125 AYDD----AFAAAPHLELTS-----AEAPDFVAFVERGVTSGPELMAAAEGYLAPLRAAG 175
Query: 192 TDVIVLACTHYPLI 205
D +VL CTHYP +
Sbjct: 176 IDTLVLGCTHYPFL 189
>gi|325911946|ref|ZP_08174349.1| glutamate racemase [Lactobacillus iners UPII 143-D]
gi|325476248|gb|EGC79411.1| glutamate racemase [Lactobacillus iners UPII 143-D]
Length = 261
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WEDHAL 60
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119
R F +L K V+ + CNTA ++ P M +G + + AA+ TQ
Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108
Query: 120 SGLISILSTPATLRRTYTSNLIHSYV-------SQCHIHLVSSMILASRVEEYACGIKIK 172
+ +++++T AT+ HSYV +Q + + LA VE
Sbjct: 109 TNQVAVIATNATVNS-------HSYVKEIAFRNAQIQVTELGEPKLAPLVEANPS----- 156
Query: 173 EDEIKKE-IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
D+IKK + C + + D ++L CTHYPL++ + +D +D +A+
Sbjct: 157 -DKIKKAVVVQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTF 215
Query: 232 CLLPRINTHQTRVFDDHALFLSGKP 256
+L R N + H + +G P
Sbjct: 216 NVLKRDNLLAAK-GGKHEYYTTGDP 239
>gi|255067504|ref|ZP_05319359.1| glutamate racemase [Neisseria sicca ATCC 29256]
gi|255048299|gb|EET43763.1| glutamate racemase [Neisseria sicca ATCC 29256]
Length = 269
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPAT 131
+ L VIACNT + ++R +M L + A QAA T S I I++T T
Sbjct: 66 ENDVKAL-VIACNTIAAVAGQKIRQKAGNMPVLDVISAGAQAALNTTSNNKIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH+ + ++ +L VEE ++ +++ ++ ++
Sbjct: 125 VNSNAYARAIHAQNPDTLVRTQATPLLVPLVEEGWLDHEVTRLTVREYLKPLLVDD---- 180
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 181 IDTLVLGCTHFPLL 194
>gi|282858901|ref|ZP_06268041.1| glutamate racemase [Prevotella bivia JCVIHMP010]
gi|282588283|gb|EFB93448.1| glutamate racemase [Prevotella bivia JCVIHMP010]
Length = 294
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N P + SI +FDSG GGL +L ++ ++PEY +IY+ D+ PYG+ + +
Sbjct: 15 NMPFYPQQPGSIGVFDSGYGGLTILHGIQQVLPEYDYIYLGDNARAPYGS---RSFEVVY 71
Query: 65 MFLFSDILDKYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAA 116
F +L ++ L ++ CNTA T+ +++L P LG + P + +
Sbjct: 72 EFTRQAVLKLFEMGCHLVILGCNTASAKALRTIQQNDLPKLAPDRRVLGVIRPTAEVIGS 131
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T S + IL+T T+R + I + +S + +E + +
Sbjct: 132 LTSSRHVGILATEGTIRSQSYNIEIQKQSPDIQVTGLSCPLWVPIIENNEADSPGADYFV 191
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
KK I+ I + + D ++L CTHYP+++
Sbjct: 192 KKRID--HIMRLDPQIDTLILGCTHYPILM 219
>gi|256789389|ref|ZP_05527820.1| glutamate racemase [Streptomyces lividans TK24]
gi|289773278|ref|ZP_06532656.1| glutamate racemase [Streptomyces lividans TK24]
gi|289703477|gb|EFD70906.1| glutamate racemase [Streptomyces lividans TK24]
Length = 280
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 79/196 (40%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ I D G P+G L R + + +
Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPKDLTGRALAVAE-AAAAH 80
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT
Sbjct: 81 RPDALIVGCNTATVHALPALRARLEPDVPVIGTVPAIKPAAA--GGGPVAIWATPATTGS 138
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE ++ E
Sbjct: 139 PYQRGLIEDFAGDTEVTEVPCPGLADAVEH-------ADETAITEAVAAAAALTPDDVTT 191
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 192 VVLGCTHYELVAERIR 207
>gi|330718035|ref|ZP_08312635.1| glutamate racemase [Leuconostoc fallax KCTC 3537]
Length = 238
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GG+ L+ + ++P FI+ D + PYG+ +++ L ++
Sbjct: 4 KQPIGVFDSGVGGISTLRVLTQMLPNEDFIFFGDSLHAPYGS----KTAGQVVDLSQKVV 59
Query: 73 DKY--QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D Q V + VIACNTA + K L +P++ +G PA+K+A ++ +L T
Sbjct: 60 DTLLAQNVKAIVIACNTATSSAKPWLVDHYPNVPIIGIEPALKEAVDDGHQDIL-VLGTA 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + Y HI ++ LA +E+ G K + +IK + F + +
Sbjct: 119 LTLSLPKFQTQLDQYQENHHITVLPCPGLADLIEQ---GDK-RLTDIKALLIDLFKDIQN 174
Query: 190 KRTDVIVLACTHYPLI 205
+ +VL CTHYP I
Sbjct: 175 RSFSAVVLGCTHYPFI 190
>gi|261363930|ref|ZP_05976813.1| glutamate racemase [Neisseria mucosa ATCC 25996]
gi|288567943|gb|EFC89503.1| glutamate racemase [Neisseria mucosa ATCC 25996]
Length = 269
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ L VIACNT + ++R +M L + A QAA T++ I I++T T
Sbjct: 66 ENDVKAL-VIACNTIAAVAGQKIRQKAGNMPVLDVISAGAQAALNTTRNNKIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH+ + ++ +L VEE ++ +++ ++ ++
Sbjct: 125 VNSNAYARAIHAQNPDTLVRTQATPLLVPLVEEGWLDHEVTRLTVREYLKPLLVDD---- 180
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 181 IDTLVLGCTHFPLL 194
>gi|254415880|ref|ZP_05029637.1| glutamate racemase [Microcoleus chthonoplastes PCC 7420]
gi|196177307|gb|EDX72314.1| glutamate racemase [Microcoleus chthonoplastes PCC 7420]
Length = 287
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 9/216 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ +P +Y AD PYG + + + + ++++
Sbjct: 18 IGVFDSGVGGLTVLRELYRQLPHESILYFADTARLPYGTRSPREIIQFGREILTWMVEQD 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPATLRR 134
++ V+ACNT+ L D LR F + LG + + + A Q G I +++TPAT
Sbjct: 78 VKMV-VLACNTSDALALDTLRREF-QLPILGLI--LPGSRAAVQVGRRIGVIATPATAAS 133
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + VS VE+ ++ E + +R D
Sbjct: 134 NAYRRALLEVEPTAQVWQVSCPEFVPLVEQN----RLYEPYTSEVALQYLTPLLQQRIDT 189
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
++ CTHYPL+ V RQ+ P V +D ++ + A
Sbjct: 190 LIYGCTHYPLLAPVLRQILPASVQLIDPAEHVVAAA 225
>gi|159036256|ref|YP_001535509.1| glutamate racemase [Salinispora arenicola CNS-205]
gi|157915091|gb|ABV96518.1| glutamate racemase [Salinispora arenicola CNS-205]
Length = 293
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 12/246 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+ D PYG +++ + ++D
Sbjct: 6 IGIFDSGVGGLTVARALTDQLPGEDLVYLGDTAHVPYGPKPIADVRRHALACLDQLMDAG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+L VIACN+A + R + PA+++A A T++G + ++ T AT+
Sbjct: 66 AKLL-VIACNSAAAACLHDARERYSVPVVEVIRPAVRRAVAATRNGRVGVIGTSATI--- 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ ++ + HI V+ + VE GI + + D +
Sbjct: 122 TSGAYEDAFAAAPHI-TVTGVACPEFVEFVERGIT-SGSALHSIAQRYLTPLRASGIDTL 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-----PRINTHQTRVFDDHAL 250
VL CTHYPL+ + + V + ++D A++ LL PR ++R H
Sbjct: 180 VLGCTHYPLLAGLLNLVMGNGVTLVSSADEAAKKVYRLLTEGVVPRRADDESRPA-RHRF 238
Query: 251 FLSGKP 256
+G P
Sbjct: 239 IATGDP 244
>gi|86607856|ref|YP_476618.1| glutamate racemase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556398|gb|ABD01355.1| glutamate racemase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 287
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I +FDSG+GGL V + +R +P+ IY D PYG + + ++ L F+ IL
Sbjct: 15 IGVFDSGLGGLTVWRALRRRLPQERLIYFGDTARLPYG---ERSPEEILAFV-RQILTWM 70
Query: 74 KYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ QPV L V+ACNT+ L D +R F ++ LG + Q AA Q I +L+T AT+
Sbjct: 71 QAQPVKLVVMACNTSSALALDHVRQEF-ALPVLGLILPGAQ-AALAQGSRIGVLATVATV 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ S I Y + + E AC E IE +++ R
Sbjct: 129 KSRAYSRAIQEYSALDPKRFPYPVY----CWEQAC------PEFVPLIEAGWLDSPALRQ 178
Query: 193 --------------DVIVLACTHYPLIVHVFRQLSP 214
D +V CTHYPL+ + + L P
Sbjct: 179 AAERYLQPLLQQGIDTLVYGCTHYPLLDPILKPLLP 214
>gi|309809660|ref|ZP_07703516.1| glutamate racemase [Lactobacillus iners SPIN 2503V10-D]
gi|308170020|gb|EFO72057.1| glutamate racemase [Lactobacillus iners SPIN 2503V10-D]
Length = 261
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WEDHAL 60
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119
R F +L K V+ + CNTA ++ P M +G + + AA+ TQ
Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108
Query: 120 SGLISILSTPATLRRTYTSNLIHSYV-------SQCHIHLVSSMILASRVEEYACGIKIK 172
+ +++++T AT+ HSYV +Q + + LA VE
Sbjct: 109 TNQVAVIATNATVNS-------HSYVKEIAFRNAQIQVTELGEPKLAPLVEANPS----- 156
Query: 173 EDEIKKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
D+IKK + C + + D ++L CTHYPL++ + +D +D +A+
Sbjct: 157 -DKIKKVVVAQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTF 215
Query: 232 CLLPRINTHQTRVFDDHALFLSGKP 256
+L R N + H + +G P
Sbjct: 216 NVLKRDNLLAEK-GGKHEYYTTGDP 239
>gi|300814837|ref|ZP_07095071.1| glutamate racemase [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511033|gb|EFK38299.1| glutamate racemase [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 270
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI FDSG+GGL VL+ +P +IY D + PYG + +R +
Sbjct: 5 SIGFFDSGVGGLSVLKVSLGEIPRESYIYYGDTLRMPYGVRSKEDI-ERYTCQAMEFFRS 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++VIACNTA + R F F PA+K++ ++S +++L+T T+
Sbjct: 64 KNVKMAVIACNTATCYGIKKARELFDFPIFGVVEPAVKESLHKSKSKKVALLATEGTVNS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTD 193
SY S +I + L +E DE+ + +++K E D
Sbjct: 124 GVYDKFFESYSSNIYIKEIGCPDLVLAIENGDL-----RDEVIVPVINKYLDKFEDFEYD 178
Query: 194 VIVLACTHYPLIVHVFRQL 212
++L CTH+P++ + F+++
Sbjct: 179 TLILGCTHFPIVENTFKRI 197
>gi|312126950|ref|YP_003991824.1| glutamate racemase [Caldicellulosiruptor hydrothermalis 108]
gi|311776969|gb|ADQ06455.1| glutamate racemase [Caldicellulosiruptor hydrothermalis 108]
Length = 267
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K
Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+
Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDIPIVAVIE--PGAEAAVRATKNKKIGVIGTEGTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191
I S + + VEE G KE + KE F EKE
Sbjct: 123 SGAFKKKILELDSSIKVFSKPCPLFVPLVEE---GWTDKEVTYLVAKEYLEEFNEKE--- 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
D +VL CTHYP + V +++ P
Sbjct: 177 IDTLVLGCTHYPFLQDVIKKVLP 199
>gi|295706790|ref|YP_003599865.1| glutamate racemase [Bacillus megaterium DSM 319]
gi|294804449|gb|ADF41515.1| glutamate racemase [Bacillus megaterium DSM 319]
Length = 264
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 26/258 (10%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + +
Sbjct: 1 MSRPIGVIDSGVGGLTVAKEIMRQLPKEQIMYIGDTARCPYGPRPSEEVRAFTWEMTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ K +L VIACNTA ++ DE++ + +G + P + A T++ I ++ T
Sbjct: 61 IAKDIKML-VIACNTATAVVLDEIQEQL-DIPVIGVIEPGSRAALKVTKNHKIGVIGTNG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ SQ + H + ++ VE AC + + E EG ++ K
Sbjct: 119 TVK------------SQAYTHALRALHTRVEVENLACPLFVPLVE-SGNYEGPEAQRIVK 165
Query: 191 RT---------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
T D ++L CTHYPL+ V ++ V + + + A +L N
Sbjct: 166 ETLKPFYHTDMDTLILGCTHYPLLKPVIQEAIGPRVQLISSGEETAIEVSAILSYSNLLA 225
Query: 242 TRVFD-DHALFLSGKPDI 258
R + +H F +G ++
Sbjct: 226 PRNMEPEHYFFTTGSTEL 243
>gi|329919573|ref|ZP_08276562.1| glutamate racemase [Lactobacillus iners SPIN 1401G]
gi|328937378|gb|EGG33800.1| glutamate racemase [Lactobacillus iners SPIN 1401G]
Length = 261
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 29/261 (11%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WEDHAL 60
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ ED
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQ 119
R F +L K V+ + CNTA ++ P M +G + + AA+ TQ
Sbjct: 53 LTRASVKF--LLTKNVKVI-IFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQ 108
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK---EDEI 176
+ +++++T AT+ HSYV + I ++ I + + E ++ DEI
Sbjct: 109 TNQVAVIATNATVNS-------HSYVKE--IAFRNAQIQVTELGEPKLAPLVEANPSDEI 159
Query: 177 KKEIEG-CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
K + C + + D ++L CTHYPL++ + +D +D +A+ +L
Sbjct: 160 KMAVVAQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLK 219
Query: 236 RINTHQTRVFDDHALFLSGKP 256
R N + H + +G P
Sbjct: 220 RDNLLAEK-GGKHEYYTTGDP 239
>gi|237737770|ref|ZP_04568251.1| glutamate racemase [Fusobacterium mortiferum ATCC 9817]
gi|229419650|gb|EEO34697.1| glutamate racemase [Fusobacterium mortiferum ATCC 9817]
Length = 262
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ SI +FDSG+GG VL+++ ++P + Y D PYG +++ L + D
Sbjct: 5 KQSIGVFDSGVGGTTVLKEILSILPNENIFYYGDSKNSPYGQKSAEEIRE-LCYKILDFF 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ V+ACNTA D L++ + S+ +G + A +K+A + + I+IL+TP T
Sbjct: 64 IANECKAVVVACNTATAAALDSLKNRY-SIPIIGVIDAGVKRALKVSSNNKINILATPFT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE--GCFIEKEG 189
+ +Y+++ + + + E+ I+ + K E I+
Sbjct: 123 VSS-------KAYITKFNKISKNISVTQEGCPEFCTMIETGWETHKDRYELLKNHIDNLS 175
Query: 190 KRTDVIVLACTHYPLI 205
K+ D ++L CTHYP+I
Sbjct: 176 KKADTLILGCTHYPII 191
>gi|153853948|ref|ZP_01995281.1| hypothetical protein DORLON_01272 [Dorea longicatena DSM 13814]
gi|149753330|gb|EDM63261.1| hypothetical protein DORLON_01272 [Dorea longicatena DSM 13814]
Length = 316
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 8 CEKKLQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
E K +N+ I +FDSG+GGL V +++ +P + +Y D PYG + K +
Sbjct: 44 VENKNRNTAAIGVFDSGVGGLTVTREIMRQLPNENVVYFGDTARVPYG-----SKSKNNI 98
Query: 66 FLFSDILDKYQPVLSV----IACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS 120
FS + ++ +V IACNTA L + ++ F + +G VP + A T++
Sbjct: 99 IRFSRQIIRFLKTKNVKAIVIACNTASALALETVQQEF-DIPIIGVIVPGARAAVRETRN 157
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G I +L T AT++ + I + + + + VEE KI E+ I +
Sbjct: 158 GQIGVLGTEATIKSETYTKEIRKLMPEAEVIGKPCPLFVPLVEEGFAKHKITEEVIDIYL 217
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLI 205
+ D ++L CTHYPL+
Sbjct: 218 S----DMRKSEIDTLILGCTHYPLL 238
>gi|108800810|ref|YP_641007.1| glutamate racemase [Mycobacterium sp. MCS]
gi|119869950|ref|YP_939902.1| glutamate racemase [Mycobacterium sp. KMS]
gi|108771229|gb|ABG09951.1| Glutamate racemase [Mycobacterium sp. MCS]
gi|119696039|gb|ABL93112.1| glutamate racemase [Mycobacterium sp. KMS]
Length = 280
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++++
Sbjct: 14 IFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDDLVERGVK 73
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
L VIACNTA + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 74 AL-VIACNTASSACLRDARERYAPVPVVEVILPAVRRAVATTRNGRIGVIGTAATI---A 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ ++ + I ++ + R ++ ++ EG + D +V
Sbjct: 130 SGAYQDAFAAARDIEVIG--VACPRFVDFVERGVTSGRQVLGLAEGYLEPLQRADVDTLV 187
Query: 197 LACTHYPLI 205
L CTHYP++
Sbjct: 188 LGCTHYPML 196
>gi|321312372|ref|YP_004204659.1| glutamate racemase [Bacillus subtilis BSn5]
gi|320018646|gb|ADV93632.1| glutamate racemase [Bacillus subtilis BSn5]
Length = 271
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T
Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE K ++ +K + +
Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKTSL----YPLKDT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ DH
Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSANAPDHQ 235
Query: 250 LFLSGKPD 257
+G D
Sbjct: 236 FLTTGARD 243
>gi|312876812|ref|ZP_07736790.1| glutamate racemase [Caldicellulosiruptor lactoaceticus 6A]
gi|311796431|gb|EFR12782.1| glutamate racemase [Caldicellulosiruptor lactoaceticus 6A]
Length = 267
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K
Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+
Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDIPIVAVIE--PGAEAAVRATKNKRIGVIGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191
I S + + VEE G KE + KE F EKE
Sbjct: 123 SGAFEKKILELDSSLQVFSKPCPLFVPLVEE---GWTDKEVTYLVAKEYLEEFNEKE--- 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
D +V+ CTHYP + V +++ P
Sbjct: 177 IDTLVMGCTHYPFLQDVIKKVLP 199
>gi|325268397|ref|ZP_08135029.1| glutamate racemase [Prevotella multiformis DSM 16608]
gi|324989251|gb|EGC21202.1| glutamate racemase [Prevotella multiformis DSM 16608]
Length = 279
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG GGL +L +R L+PEY +IY+ D+ PYG+ + ++ +M LF
Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPEYDYIYLGDNARAPYGSRSFDIVYQFTRQAVMKLFG-- 68
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
L ++ CNTA T+ +++L + P LG + P + T+S + +
Sbjct: 69 ---LGCQLVILGCNTASAKALRTIQQNDLPALDPDRRVLGVIRPTAEIIGRLTRSRHVGL 125
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T+R + I + V + +E + +KK I+ I
Sbjct: 126 LATEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRID--HI 183
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ + D ++L CTHYP+++ + +P V + + +A R L R
Sbjct: 184 MRIDPQIDSLILGCTHYPILMPKILKHAPHGVRIIPQGEYVAESLRDYLRR 234
>gi|282882426|ref|ZP_06291053.1| glutamate racemase [Peptoniphilus lacrimalis 315-B]
gi|281297746|gb|EFA90215.1| glutamate racemase [Peptoniphilus lacrimalis 315-B]
Length = 270
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI FDSG+GGL VL+ +P +IY D + PYG + +R +
Sbjct: 5 SIGFFDSGVGGLSVLKVSLGEIPRESYIYYGDTLRMPYGVKSKEDI-ERYTCQAMEFFRS 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++VIACNTA + R F F PA+K++ ++S +++L+T T+
Sbjct: 64 KNVKMAVIACNTATCYGIKKARELFDFPIFGVVEPAVKESLHKSKSKKVALLATEGTVNS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTD 193
SY S +I + L +E DE+ + +++K E D
Sbjct: 124 GVYDKFFESYSSNIYIKEIGCPDLVLAIENGDL-----RDEVIVPVINKYLDKFEDFEYD 178
Query: 194 VIVLACTHYPLIVHVFRQL 212
++L CTH+P++ + F+++
Sbjct: 179 ALILGCTHFPIVENTFKRI 197
>gi|319900213|ref|YP_004159941.1| glutamate racemase [Bacteroides helcogenes P 36-108]
gi|319415244|gb|ADV42355.1| glutamate racemase [Bacteroides helcogenes P 36-108]
Length = 281
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 29/237 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P LG + P +++ T++ + +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQINDLPHLDPMRRVLGVIRPTVERIGDITKNRHVGVLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186
T++ SY + H + RV AC + ++ +E + + FI
Sbjct: 131 GTIKS-------GSYPLEIH-----KLFPDIRVSGEACPMWVYLVENNEAQGDGTDYFIR 178
Query: 187 K-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
K + ++ D ++L CTHYPL++ R+ P + + + +A + L R
Sbjct: 179 KYINSLLAKDRQVDTVILGCTHYPLLLPKIRRYMPEGITTVTQGELVAESLKDYLRR 235
>gi|296170277|ref|ZP_06851868.1| glutamate racemase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895000|gb|EFG74719.1| glutamate racemase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 271
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 13/236 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ +
Sbjct: 10 IFDSGVGGLTVARAIIDQLPDEDIVYVGDTGHGPYGPLTIPEVRAHALAIGDDLVGRGVK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 70 AL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTQATI----N 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
S+ + V+++ V+ G+ ++ EG + + D +VL
Sbjct: 125 SHAYQDAFAAARDTEVTAVACPRFVDFVERGVTSGR-QVLGLAEGYLEPLQRAQVDTLVL 183
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR--INTHQ----TRVFD 246
CTHYPL+ + + V + +++ A+ R L R + H+ TRVF+
Sbjct: 184 GCTHYPLLSGLIQLAMGEQVTLVSSAEETAKEVLRVLTERDLLRAHEAPPATRVFE 239
>gi|291571969|dbj|BAI94241.1| glutamate racemase [Arthrospira platensis NIES-39]
Length = 285
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 21/218 (9%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLF 68
K I IFDSG+GGL VL+++ +P +Y AD PYG + + R + +
Sbjct: 5 KRGQKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITW 64
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ D + ++ACNT+ L + +RS F + LG + P + AA +Q I +++
Sbjct: 65 AVAQDVK---MVLMACNTSSALALEVVRSEF-DIPILGLILPGAR--AAISQGERIGVIA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY----ACGIKIKEDEIKKEIEGC 183
TPAT I + V +E+ C ++ + + I+
Sbjct: 119 TPATAASNAYRQAIQEINPAVQVWQVGCPAFVPLIEQNRIHDPCTLEAAREYLTPLIQ-- 176
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
+R D ++ CTHYP + V R L P V +D
Sbjct: 177 ------QRIDTLIYGCTHYPHLAPVLRSLLPAAVKLVD 208
>gi|194468341|ref|ZP_03074327.1| glutamate racemase [Lactobacillus reuteri 100-23]
gi|194453194|gb|EDX42092.1| glutamate racemase [Lactobacillus reuteri 100-23]
Length = 267
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 10/232 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V++ +R MP+ I+V D FPYG +++ + + +L++
Sbjct: 6 IGVMDSGLGGLSVIRVLREQMPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLLEQD 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ +IACNTA L++ P + +G + AA I ++ T +T++
Sbjct: 66 VKMM-IIACNTATAAALQLLQNELP-IPVIGVIEPGAMAATQHHYKKIGVIGTESTIKNG 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ ++ + + L S VE G + + E+E F + K + +
Sbjct: 124 AYAKILAKLNPTLSVISSPAQPLVSIVEHGQTGTSEAQKAVDTELE-VF---DNKSIEAL 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+L CTH+P + V +D + R+A+ LL T + ++ DD
Sbjct: 180 ILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELL----TSENQLSDD 227
>gi|23099563|ref|NP_693029.1| glutamate racemase [Oceanobacillus iheyensis HTE831]
gi|29839537|sp|Q8EPJ4|MURI_OCEIH RecName: Full=Glutamate racemase
gi|22777793|dbj|BAC14064.1| glutamate racemase [Oceanobacillus iheyensis HTE831]
Length = 274
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 15/253 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ SI + DSG+GGL V+ ++ +P+ IY+ D PYG +++ + +
Sbjct: 1 MDKSIGVIDSGVGGLTVVHELMRQLPKEQLIYLGDTARCPYGPRSKEEVRQFTWEMVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L K +L V+ACNTA +L+ + +G + P + A T + + ++ T
Sbjct: 61 LTKNIKML-VVACNTATAFTLKDLKEQL-DIPVIGVIQPGARAAIKSTTNNQVGVIGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIEKEG 189
T+ S + S + ++ VE G+ + E K + E
Sbjct: 119 TISSGAYSQALEKIKSDIQVSGLACPPFVPMVER---GV-LSGPEAKAVVSEALRPFSNN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ +++ V + +S+ AR LL + HQ D
Sbjct: 175 KEMDTLILGCTHYPLLKSTIQEVMGEEVTVISSSEETARETSTLL---DVHQIMNRSDLV 231
Query: 248 --HALFLSGKPDI 258
H + +G +I
Sbjct: 232 PLHQFYTTGDLEI 244
>gi|162453120|ref|YP_001615487.1| glutamate racemase [Sorangium cellulosum 'So ce 56']
gi|161163702|emb|CAN95007.1| glutamate racemase [Sorangium cellulosum 'So ce 56']
Length = 309
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V++ +R P +Y+ D PYG + + + ++ +
Sbjct: 11 VFDSGLGGLTVVRALRRRCPAEDIVYLGDTARVPYGTRSPETVVRYALGCARVLIGRGVK 70
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
+ V+ACNT + D LR + LG + P + A A ++ I +L T T+
Sbjct: 71 AI-VVACNTVSAVAIDMLRVEL-DLPVLGVILPGARAAVAASRGATIGVLGTAGTIASGA 128
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE---KEGKRTD 193
+ S ++ + ++ +L S EE E E+ + + ++E G R+
Sbjct: 129 YPRAVASLSTRTEVAGQAAPLLVSLAEE-----GWLEGEVPRLVARRYLEPLIGAGARS- 182
Query: 194 VIVLACTHYPLIVHVFR----QLSPWPVDWLDNSDSIA 227
IVL CTH+PL+ L+ P+ +D++ + A
Sbjct: 183 -IVLGCTHFPLLRAAIEAETASLAGGPLPIVDSASATA 219
>gi|331695366|ref|YP_004331605.1| glutamate racemase [Pseudonocardia dioxanivorans CB1190]
gi|326950055|gb|AEA23752.1| Glutamate racemase [Pseudonocardia dioxanivorans CB1190]
Length = 275
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 8/214 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +YV D PYG +++ + + +++++
Sbjct: 10 IGIFDSGVGGLTVARAVIDQLPAERIVYVGDTEHGPYGPLRIPEIRRHALAIGDELIERG 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+L VIACNTA + R +P +PA+++A A T++G I ++ T AT+
Sbjct: 70 VKLL-VIACNTASAACLADARERYPVPVVEVVLPAVRRAVAATRNGRIGVIGTSATI--- 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDV 194
TS S V+S+ V+ G+ + I ++E + R D
Sbjct: 126 -TSGAYADAFSAARDVSVTSVACPRFVDFVERGVTSGRQILG--IAQSYLEPLQRARVDT 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V + ++D A+
Sbjct: 183 VVLGCTHYPLLSGLLQIVLGPEVTLVSSADETAK 216
>gi|307150996|ref|YP_003886380.1| glutamate racemase [Cyanothece sp. PCC 7822]
gi|306981224|gb|ADN13105.1| glutamate racemase [Cyanothece sp. PCC 7822]
Length = 278
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 15/222 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL--FSD 70
++ I IFDSG+GGL VL+++ +P +Y AD PYG + + L F+ D
Sbjct: 6 RSPIGIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGT---RSAGEILEFVREIMD 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTP 129
+ Q + ++ACNT+ L D +R F + LG + + A A Q G I +++TP
Sbjct: 63 WMTAQQVKMVIMACNTSSALALDAVRDEF-DVPVLGVI--LPGARAAVQKGKRIGVIATP 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT I V + V +E+ +I E + KE+ +++
Sbjct: 120 ATAASNAYRQAIEEIVPTAQVWQVGCPEFVPLIEQN----RIYEP-LTKEVAKQYLKPLL 174
Query: 190 K-RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + D +V CTHY + +FRQ+ P V +D + + A
Sbjct: 175 QLKIDTLVYGCTHYRHLEPLFRQILPSSVRLVDPARYVVSAA 216
>gi|254819168|ref|ZP_05224169.1| glutamate racemase [Mycobacterium intracellulare ATCC 13950]
Length = 271
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 19/257 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P+ IYV D PYG ++ + + D++ +
Sbjct: 10 VFDSGVGGLTVARAIIDQLPDEDIIYVGDTGHGPYGPLTIPDVRAHALAIGDDLVGRGVK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACNTA + R + +PA+++A A T++G I ++ T AT+ ++
Sbjct: 70 AL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTQATI-NSHA 127
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ I V+ VE + ++ EG + + D +VL
Sbjct: 128 YQDAFAAARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVDTLVL 183
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA------RCLL-PRINTHQTRVFDDHAL 250
CTHYPL+ + + V + +++ A+ R LL P TRVF+
Sbjct: 184 GCTHYPLLSGLIQLAMGEHVTLVSSAEETAKEVLRVLTERDLLRPHDAPPATRVFE---- 239
Query: 251 FLSGKPDIAMRRLMQGF 267
+G PD A RL F
Sbjct: 240 -ATGDPD-AFTRLAARF 254
>gi|297625966|ref|YP_003687729.1| glutamate racemase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921731|emb|CBL56289.1| Glutamate racemase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 272
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 108/249 (43%), Gaps = 10/249 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + I IFDSG GGL V + + L+P IY+ D PYG +++ ++
Sbjct: 3 RDVNAPIGIFDSGFGGLTVARAVVDLLPREDIIYLGDTARAPYGPRPIAEVREFVLQALD 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ + L VIACNT + + R + +PA ++AA T++G + ++ T
Sbjct: 63 SLVARGVKSL-VIACNTGSSAALHDARERYDLPITEVVLPAARKAARITRNGRVGVICTR 121
Query: 130 AT-LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T + R+Y L S V + + + VE GI + ++ E +
Sbjct: 122 GTAISRSYNDALAASPVK------LFTQVCPRFVEFVEAGITTGPEVLQLARE-YLAPLQ 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-D 247
D ++L CTHYPL+ V + V + +SD AR L R + +T +
Sbjct: 175 ADDIDTLILGCTHYPLLSGVISYVMGEDVTLVSSSDECARAVFAELTRDDLLRTEPHEPQ 234
Query: 248 HALFLSGKP 256
F +G P
Sbjct: 235 REFFTTGDP 243
>gi|298374652|ref|ZP_06984610.1| glutamate racemase [Bacteroides sp. 3_1_19]
gi|298269020|gb|EFI10675.1| glutamate racemase [Bacteroides sp. 3_1_19]
Length = 276
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + F +L +
Sbjct: 9 IGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGT---RSFEVVYQFTRQAVLRLF 65
Query: 76 QP--VLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ L ++ACNTA T+ + +L + P+ LG + P ++ +++ I I+
Sbjct: 66 ESGCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVG 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCF 184
T T+ TSN + + + H+ +V AC + ++ +E F
Sbjct: 126 TSGTI----TSNSYTIEIGRMYPHI--------QVTGEACPMWVPLVENNEFNSPGADYF 173
Query: 185 IEKE-------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++K + D ++L CTHYPL++ R P + + +A R L R
Sbjct: 174 VKKHIDHILSVDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGR 232
>gi|118619134|ref|YP_907466.1| glutamate racemase [Mycobacterium ulcerans Agy99]
gi|183984029|ref|YP_001852320.1| glutamate racemase MurI [Mycobacterium marinum M]
gi|166231044|sp|A0PUH6|MURI_MYCUA RecName: Full=Glutamate racemase
gi|229486244|sp|B2HQH3|MURI_MYCMM RecName: Full=Glutamate racemase
gi|118571244|gb|ABL05995.1| glutamate racemase MurI [Mycobacterium ulcerans Agy99]
gi|183177355|gb|ACC42465.1| glutamate racemase MurI [Mycobacterium marinum M]
Length = 271
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ +
Sbjct: 10 IFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEVRAHALAIGDDLVGRGVK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACNTA + R + +PA+++A A T++G I ++ T R T T
Sbjct: 70 AL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGT----RATIT 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
S+ + ++++ V+ G+ ++ EG + D +VL
Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVERGVTSGR-QVLGLAEGYLEPLQRSGVDTLVL 183
Query: 198 ACTHYPLI 205
CTHYPL+
Sbjct: 184 GCTHYPLL 191
>gi|229159921|ref|ZP_04287928.1| Glutamate racemase [Bacillus cereus R309803]
gi|228623660|gb|EEK80479.1| Glutamate racemase [Bacillus cereus R309803]
Length = 276
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 106/244 (43%), Gaps = 8/244 (3%)
Query: 13 QNSIL-IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+NS++ + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F +
Sbjct: 6 ENSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FIFEMVEF 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L ++ V+ACNT +L+ S+ +G + P + A T+ G I ++ T
Sbjct: 65 LKQFPLKALVVACNTGAAAALTDLQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVG 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +H + +H + LA+ VE I ++K+ + +
Sbjct: 124 TIKSNMYEKALHELDTYLEVHSHACPTLATVVENQLEDIAYVTQQVKQ----ALLPLTKE 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTHYPL+ ++ V + +++ A +L ++ H
Sbjct: 180 DIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDKLNPKHRF 239
Query: 251 FLSG 254
F +G
Sbjct: 240 FTTG 243
>gi|229918347|ref|YP_002886993.1| glutamate racemase [Exiguobacterium sp. AT1b]
gi|229469776|gb|ACQ71548.1| glutamate racemase [Exiguobacterium sp. AT1b]
Length = 272
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+++ +I + DSG+GGL V++++ +P+ +Y+ D PYG ++ L
Sbjct: 5 QMKRAIGVLDSGVGGLTVVKELMRQLPKEEIVYIGDTERCPYGPRPHDEIEAYTWELIEF 64
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+L K ++ VIACNTA ++ E R + +G + P + A T++ I ++ T
Sbjct: 65 LLKKDVKMI-VIACNTATAVVLKEARKRL-DIPVIGVIDPGARAAVKGTRNKHIGVIGTK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + + ++ ++ VE ++ + +++ +E +
Sbjct: 123 MTIESGSYEKALRHVAGEVDVYSLACPPFVPLVEAG----EVSGERVRQVVEETLRPLQP 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYPL+ V + + V + + D A +L
Sbjct: 179 SEMDTLILGCTHYPLLAPVIQDVVGPDVHLISSGDETALEVAAML 223
>gi|126656938|ref|ZP_01728116.1| glutamate racemase [Cyanothece sp. CCY0110]
gi|126621776|gb|EAZ92485.1| glutamate racemase [Cyanothece sp. CCY0110]
Length = 281
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 10 KKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+++QNS I +FDSG+GGL VL+++ +P+ +Y AD PYGN E + + + +
Sbjct: 2 REIQNSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGNREASEILQFVREIL 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ + + ++ ++ACNT+ L + +R F + LG + P K AA Q I ++S
Sbjct: 62 AWMTGQNVKMV-IMACNTSSALALEAVRQEF-DLPILGVILPGAK--AAVKQGKRIGVIS 117
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT + I + + V +E+ +I + K+ +
Sbjct: 118 TPATAKSQAYRQAIQEINPEAQVWQVGCPQFVPLIEQN----RIWDVYTKQVAQEYLSPL 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
D +V CTHY + + + + P + +D + + + A+
Sbjct: 174 LAHDIDTLVYGCTHYRHLEALIKTIIPGTIKLIDPASYVVQAAK 217
>gi|281421511|ref|ZP_06252510.1| glutamate racemase [Prevotella copri DSM 18205]
gi|281404583|gb|EFB35263.1| glutamate racemase [Prevotella copri DSM 18205]
Length = 278
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG GGL +L +R MP+Y ++Y+ D+ PYG+ + ++ ++ LFS
Sbjct: 10 IGVFDSGYGGLTILHGLRQTMPQYDYMYLGDNARAPYGSRSFEVVYKFTRQAVLKLFSMG 69
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
L ++ CNTA +L + ++ PS LG + P + T+S + +
Sbjct: 70 CH-----LVILGCNTASAKALRSLQQRDIPELDPSRRVLGIIRPTAEVIGTITKSNHVGL 124
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T++ + I + + V+ + A+ VE + +KK I+ +
Sbjct: 125 LATEGTIKSQSYNMEISKLWPEIQVSGVACPLWAAIVEANEADSPGADYFVKKRIDQLML 184
Query: 186 EKEGKRTDVIVLACTHYPLIV 206
+ D I+L CTHYPL++
Sbjct: 185 KD--ADIDTIILGCTHYPLLM 203
>gi|167765980|ref|ZP_02438033.1| hypothetical protein CLOSS21_00471 [Clostridium sp. SS2/1]
gi|317497209|ref|ZP_07955533.1| Asp/Glu/Hydantoin racemase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167712337|gb|EDS22916.1| hypothetical protein CLOSS21_00471 [Clostridium sp. SS2/1]
gi|291558774|emb|CBL37574.1| glutamate racemase [butyrate-producing bacterium SSC/2]
gi|316895454|gb|EFV17612.1| Asp/Glu/Hydantoin racemase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 267
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 11/224 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V +++ +PE IY D PYG + + + + +L K
Sbjct: 5 IGVFDSGVGGLTVAREIMRQLPEESMIYFGDTARVPYGTKSKDTIVRYSRQIVNFLLSKG 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA L +L+ + ++ +G V P A T++ I I+ T AT++
Sbjct: 65 VKAV-VIACNTASALALADLQELY-NVPIIGMVQPGAIAAMNATKNKNIGIIGTNATIKS 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + VEE +I ED + + + +E K+ D+
Sbjct: 123 GQYGQYLRKLDPSVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYL------REFKQYDI 176
Query: 195 --IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++L CTHYPL+++ ++ V ++ + +A+ + +L +
Sbjct: 177 DSLILGCTHYPLLINPIQRFVGDKVTLVNPAYEVAKTLKQMLAQ 220
>gi|308174536|ref|YP_003921241.1| glutamate racemase [Bacillus amyloliquefaciens DSM 7]
gi|307607400|emb|CBI43771.1| glutamate racemase [Bacillus amyloliquefaciens DSM 7]
Length = 272
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 11/248 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 61
Query: 72 LDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L+ + + VIACNTA + ++D R T + +G + P + A T++ I ++ T
Sbjct: 62 LENHHIKMLVIACNTATAIALEDIQRKT--DIPVVGVIQPGARTAIKVTKNQHIGVIGTI 119
Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ R Y L+ + + ++ +L VE + ++ + +E +
Sbjct: 120 NTIKSRAYEQALL-GLNADLQVENMACPLLVPFVESG----RFLQESAAEAVEASLEPLK 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDD 247
G D ++L CTHYP++ + V + + D AR +L +Q++ +
Sbjct: 175 GTAIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPE 234
Query: 248 HALFLSGK 255
H +G+
Sbjct: 235 HQFLTTGE 242
>gi|261380865|ref|ZP_05985438.1| glutamate racemase [Neisseria subflava NJ9703]
gi|319638648|ref|ZP_07993408.1| glutamate racemase [Neisseria mucosa C102]
gi|284796337|gb|EFC51684.1| glutamate racemase [Neisseria subflava NJ9703]
gi|317400032|gb|EFV80693.1| glutamate racemase [Neisseria mucosa C102]
Length = 269
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ L VIACNT + ++R +M L + A +AA T++ I I++T T
Sbjct: 66 ENDVKAL-VIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALQTTKNNRIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IHS + + ++ +L VEE ++ +++ ++ +
Sbjct: 125 VNSNAYARAIHSQNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLADD---- 180
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 181 IDTLVLGCTHFPLL 194
>gi|241889903|ref|ZP_04777201.1| glutamate racemase [Gemella haemolysans ATCC 10379]
gi|241863525|gb|EER67909.1| glutamate racemase [Gemella haemolysans ATCC 10379]
Length = 264
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 27/258 (10%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N+I +FDSG+GGL V +++ +P Y D PYG+ + K +
Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTKEEIIKNTDRAVKFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+DK L V+ACNTA D L++ + + +G V P ++A T++ + +L T
Sbjct: 61 IDKGVK-LVVLACNTATAAALDYLQNKY-EVPIIGVVQPGARRAIQATENNKVLVLGTK- 117
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KEDEIKKEIEGCFIE 186
+T+N S V I ++S I+ V + AC + E + KE I
Sbjct: 118 -----FTAN---SKVYDIEIENINSDII---VFDKACPAFVPFIESEGNLDKEATKNLIS 166
Query: 187 KEGKRT-----DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
T D +VL CTHYP++ + + + + AR +L HQ
Sbjct: 167 DTLGNTNTLGVDTVVLGCTHYPILKKDIEEYYGNNIKVISSGREAAREVSTVLGYTKLHQ 226
Query: 242 TRVFD--DHALFLSGKPD 257
+ F+ +H F+S K D
Sbjct: 227 KK-FNKKEHRFFISQKSD 243
>gi|325104671|ref|YP_004274325.1| glutamate racemase [Pedobacter saltans DSM 12145]
gi|324973519|gb|ADY52503.1| glutamate racemase [Pedobacter saltans DSM 12145]
Length = 270
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 9/218 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSGIGGL V +R ++P+ IY D PYG+ A++ + + +
Sbjct: 4 EQPIGIFDSGIGGLTVANAIRKVLPKEKIIYFGDTGHMPYGDKSPDAIRYYSLKIGKFLE 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+K V+ VIACNTA +L D+L + L + P + Q I ++ T A
Sbjct: 64 EKGCKVI-VIACNTASSLAYDDLVQFMGDRIPILNVIDPVVHYVTDDMQYQKIGVIGTKA 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-IEGCFIEKEG 189
T+ + + ++ +++ +LA +EE E+ I IE +
Sbjct: 123 TISSDVYARKLKERNLGLQVNSLATPLLAPMIEE-----GFFENNISHTVIESYLSSPQL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ D ++LACTHYPLI VD L+ + +A
Sbjct: 178 QNIDALILACTHYPLIKREIESFFNNQVDILNTASIVA 215
>gi|312621720|ref|YP_004023333.1| glutamate racemase [Caldicellulosiruptor kronotskyensis 2002]
gi|312202187|gb|ADQ45514.1| glutamate racemase [Caldicellulosiruptor kronotskyensis 2002]
Length = 267
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K
Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+
Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDVPIVAVIE--PGAEAAVKATKNKRIGVIGTEGTIS 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKR 191
I + + + VEE G KE I KE F E K
Sbjct: 123 SGAFEKKILELDNSIKVFSKPCPLFVPLVEE---GWTDKEVTYLIAKEYLEEFNE---KA 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
D +VL CTHYP + V R++ P
Sbjct: 177 IDTLVLGCTHYPFLQDVIRKVLP 199
>gi|269216891|ref|ZP_06160745.1| glutamate racemase [Slackia exigua ATCC 700122]
gi|269129698|gb|EEZ60782.1| glutamate racemase [Slackia exigua ATCC 700122]
Length = 430
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 30/250 (12%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ DN P I +FDSG GGL V +++ LMP +Y D PYG + H +
Sbjct: 143 EFDNAP--------IGVFDSGYGGLTVAREIAALMPHESIVYFGDTARCPYGPRDPHEVA 194
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
+ + + + + +L VIACNTA + + TF S+ GAV P + AA T +
Sbjct: 195 EFVQQIGRWLTARNVKML-VIACNTATAAGLERAQQTF-SVPVRGAVEPGARAAARATHN 252
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK--- 177
G + ++ T T+ I + + + +++ VE GI++ + I+
Sbjct: 253 GRVGVIGTKGTIESDCYPRAIRAIDAGLTVFSIATPRFVEIVEN---GIRLSKGPIEDLT 309
Query: 178 ------------KEIEGCFIEKEGK-RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
+ I ++E + D +VLACTHYPL+ + + V + +S+
Sbjct: 310 SMASKAYIRPSFQAIAREYLEPLRRCHVDALVLACTHYPLLKALIGGVMGHKVLLVSSSE 369
Query: 225 SIARRARCLL 234
++A R L
Sbjct: 370 ALAHDVRATL 379
>gi|324997298|ref|ZP_08118410.1| glutamate racemase [Pseudonocardia sp. P1]
Length = 283
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 21/267 (7%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E+ + I IFDSG+GGL V + + L+P +YV D PYG +++ + +
Sbjct: 4 ERGIDAPIGIFDSGVGGLTVARSVIDLLPAEQIVYVGDTAHSPYGPRTIADIRRLALQIG 63
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
++++ L VIACN+A + R +P PA+++A A T++G I ++ T
Sbjct: 64 DELVESGVKAL-VIACNSASAACLADFRERYPVPVVEVVRPAVRRAVAATRNGRIGVIGT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ ++ + I V+ VE + ++ EG +
Sbjct: 123 QATIASGAYADAFDA-ARDTEITSVACPRFVDFVERGTTSGR----QVLGVAEGYLEPLQ 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
D +VL CTHYPL+ V + V + ++D AR + T TR + D
Sbjct: 178 RAGVDTVVLGCTHYPLLTGVLEIVLGPDVTLVSSADETARTL------VRTLHTRDLLRD 231
Query: 247 D------HALFLSGKPDIAMRRLMQGF 267
D H +G P+ RRL + F
Sbjct: 232 DTAPAAAHRFLATGDPE-PFRRLGRRF 257
>gi|158429235|pdb|2OHO|A Chain A, Structural Basis For Glutamate Racemase Inhibitor
gi|158429236|pdb|2OHO|B Chain B, Structural Basis For Glutamate Racemase Inhibitor
Length = 273
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + +
Sbjct: 18 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 77
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E+++ + LG V P A T G + ++ TP T
Sbjct: 78 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 129
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190
+ S + + I L++ I +V AC + I E I K+I +
Sbjct: 130 ---VASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVG 183
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246
+ D +VL CTHYPL+ + + + V +D+ R LL N HQ V
Sbjct: 184 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 241
Query: 247 DHALFLSGKPDI 258
+H F + P+I
Sbjct: 242 EHRFFTTANPEI 253
>gi|146296395|ref|YP_001180166.1| glutamate racemase [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409971|gb|ABP66975.1| glutamate racemase [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 267
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 18/233 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM----FLFSDI 71
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M FL S
Sbjct: 6 IGIFDSGLGGLTVFKEIVNLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ + V+ACNTA + L+ F P +A + P + AA T++ + ++ T
Sbjct: 66 IK-----IVVVACNTASAYAYEFLKGQFDIPIIAVIE--PGARAAALATKNKKVGVIGTE 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ I + + + VEE ++ K+ +E E +
Sbjct: 119 GTIASGSFEKKILEFDPDIKVFSKPCPLFVPLVEEGWIDKEVTYLVAKEYLE----EFKE 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
K D +VL CTHYP + +V +++ P V ++ + A++ +L + N T
Sbjct: 175 KGIDTLVLGCTHYPFLQNVIKKILP-EVTLINPALETAKQTYEVLKQNNMLNT 226
>gi|225023363|ref|ZP_03712555.1| hypothetical protein EIKCOROL_00221 [Eikenella corrodens ATCC
23834]
gi|224943841|gb|EEG25050.1| hypothetical protein EIKCOROL_00221 [Eikenella corrodens ATCC
23834]
Length = 271
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL V++ + +P + +Y D PYG ++ + + L
Sbjct: 8 QRPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRSTIETYTAQIV-EFL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPAT 131
++ VIACNT + ++R T M L + A QAA T ++G I I++T T
Sbjct: 67 MQHDVKALVIACNTIAAVAGAKVRQTAGGMPVLDVIAAGAQAALATSRNGRIGIIATSTT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH+ Q + + +L VEE ++ +++ ++ E
Sbjct: 127 VNSNAYARAIHAQNPQARVPSQACPLLVPLVEEGWLEHEVTRLTVREYLKPLLAED---- 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
D +VL CTHYPL+ + + +P
Sbjct: 183 IDTLVLGCTHYPLLKPLLQSEAP 205
>gi|15674511|ref|NP_268685.1| glutamate racemase [Streptococcus pyogenes M1 GAS]
gi|71910117|ref|YP_281667.1| glutamate racemase [Streptococcus pyogenes MGAS5005]
gi|20177988|sp|Q9A1B7|MURI_STRP1 RecName: Full=Glutamate racemase
gi|158429234|pdb|2OHG|A Chain A, Structural Basis For Glutamte Racemase Inhibition
gi|158429237|pdb|2OHV|A Chain A, Structural Basis For Glutamate Racemase Inhibition
gi|13621614|gb|AAK33406.1| putative glutamate racemase [Streptococcus pyogenes M1 GAS]
gi|71852899|gb|AAZ50922.1| glutamate racemase [Streptococcus pyogenes MGAS5005]
Length = 264
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + +
Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E+++ + LG V P A T G + ++ TP T
Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190
+ S + + I L++ I +V AC + I E I K+I +
Sbjct: 121 ---VASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVG 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246
+ D +VL CTHYPL+ + + + V +D+ R LL N HQ V
Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232
Query: 247 DHALFLSGKPDI 258
+H F + P+I
Sbjct: 233 EHRFFTTANPEI 244
>gi|229087049|ref|ZP_04219201.1| Glutamate racemase [Bacillus cereus Rock3-44]
gi|228696242|gb|EEL49075.1| Glutamate racemase [Bacillus cereus Rock3-44]
Length = 265
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 117/261 (44%), Gaps = 12/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + ++
Sbjct: 2 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQ-FTWEMTEH 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 61 LLALDIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ + ++ VE + + +++ ++ +
Sbjct: 120 TVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESAMAYEVVRETLQPL----KTT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDD 247
D ++L CTHYP++ V +++ V + + D AR +L +N + + D
Sbjct: 176 EIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ--SD 233
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
H +GK D+ + FG
Sbjct: 234 HLFLTTGKIDLFKEIASKWFG 254
>gi|224536359|ref|ZP_03676898.1| hypothetical protein BACCELL_01233 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522019|gb|EEF91124.1| hypothetical protein BACCELL_01233 [Bacteroides cellulosilyticus
DSM 14838]
Length = 279
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILSKIREALPQYDYIYLGDNARSPYGTRSFEIVYEFTLQAVTRLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P+ LG + P ++ T S + IL+T
Sbjct: 71 GCHLVILACNTASAKALRSIQMNDLPEMDPARRVLGVIRPTVECIGNITHSRHVGILATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ IH + + + S VE + ++K I + E
Sbjct: 131 GTIKSESYPLEIHKLFPDIQVEGEACPLWVSLVENNEAEGDGTDYFVRKYINELLSKDE- 189
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D ++L CTHYP+++ + P + + + +A + L R
Sbjct: 190 -QIDTVILGCTHYPILLPKIEKYMPKGITTVAQGELVATSLKDYLQR 235
>gi|307564832|ref|ZP_07627360.1| glutamate racemase [Prevotella amnii CRIS 21A-A]
gi|307346554|gb|EFN91863.1| glutamate racemase [Prevotella amnii CRIS 21A-A]
Length = 278
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG GGL +L ++ L+PEY +IY+ D+ PYG+ + ++ ++ LF
Sbjct: 10 IGVFDSGYGGLTILHAIQKLLPEYDYIYLGDNARAPYGSRSFDVVYEFTRQAVLKLFD-- 67
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
L ++ CNTA T+ +++L P LG + P + T S I I
Sbjct: 68 ---MGCSLVILGCNTASAKALRTIQRNDLPVIAPDNRVLGVIRPTAEVVGLLTHSNHIGI 124
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T+R + I + + ++ + +E + +KK IE I
Sbjct: 125 LATEGTVRSKSYNIEIQKLWPKISVTGIACPLWVPIIENNEADSPGADYFVKKRIE--HI 182
Query: 186 EKEGKRTDVIVLACTHYPLIV 206
+ + D I+L CTHYP+++
Sbjct: 183 MRLDPQIDTIILGCTHYPILM 203
>gi|294674929|ref|YP_003575545.1| glutamate racemase [Prevotella ruminicola 23]
gi|294473325|gb|ADE82714.1| glutamate racemase [Prevotella ruminicola 23]
Length = 277
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 13/231 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + F ++
Sbjct: 7 GPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYG---PRSFDVVYEFTRQAVVK 63
Query: 74 KYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
++ L ++ CNTA T+ +++L P LG + P + T S + +
Sbjct: 64 LFEMGCHLVILGCNTASAKALRTIQQNDLPKIDPERRVLGIIRPTAEVIGDLTTSKHVGV 123
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T++ IH + V+ VE + +KK I+ I
Sbjct: 124 LATEGTIKSESYDLEIHKLFPDIKVSGVACPFWVPLVEYNEADSPGADYFVKKRIDE--I 181
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ D I+L CTHYPL++ + P V + + +A + L R
Sbjct: 182 MRKDPDIDTIILGCTHYPLLMPKILKYLPAGVRVVPQGEYVAESLKQYLER 232
>gi|189464295|ref|ZP_03013080.1| hypothetical protein BACINT_00636 [Bacteroides intestinalis DSM
17393]
gi|189438085|gb|EDV07070.1| hypothetical protein BACINT_00636 [Bacteroides intestinalis DSM
17393]
Length = 279
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + +
Sbjct: 8 IPGPIGVFDSGYGGLTILSKIREALPQYDYIYLGDNARTPYGTRSFEIVYEFTLQAVTKL 67
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
+ L ++ACNTA ++ ++L P+ LG + P ++ + TQS + +
Sbjct: 68 FE-MGCHLVILACNTASAKALRSIQINDLPGMDPARRVLGVIRPTVECIGSITQSRHVGV 126
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T++ IH + + + S VE + ++K I
Sbjct: 127 LATAGTIKSESYPLEIHKLFPDIQVAGEACPLWVSLVENNEAEGDGTDYFVRKYINELLA 186
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ + D ++L CTHYPL++ ++ P + + + +A
Sbjct: 187 KD--AQIDTVILGCTHYPLLLPKIKKHMPDGITTVAQGELVA 226
>gi|218264477|ref|ZP_03478310.1| hypothetical protein PRABACTJOHN_04010 [Parabacteroides johnsonii
DSM 18315]
gi|218221970|gb|EEC94620.1| hypothetical protein PRABACTJOHN_04010 [Parabacteroides johnsonii
DSM 18315]
Length = 278
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I IFDSG GGL + K+R MP Y +IY+ D+ PYG + ++ + LF++
Sbjct: 9 IGIFDSGYGGLTIFDKIREAMPGYDYIYLGDNARSPYGTRSFEVVYRFTRQAVETLFNEG 68
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
L ++ACNTA T+ + +L P+ LG + P ++ ++S + I
Sbjct: 69 CQ-----LVILACNTASAKALRTIQQRDLPQWDPARRVLGVIRPTVELMDKISKSKHVGI 123
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L T T+ S I + + + VE G + ++K +E I
Sbjct: 124 LGTTGTITSGSYSLEIKKMFPHMTVTGEACPMWVPLVENNEFGSPGADYFVRKHLE--HI 181
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ D +VL CTHYPL++ + P + + +A
Sbjct: 182 LATDPKIDTLVLGCTHYPLLIEKIKAFLPAGITLFSQGEYVA 223
>gi|225076304|ref|ZP_03719503.1| hypothetical protein NEIFLAOT_01345 [Neisseria flavescens
NRL30031/H210]
gi|224952428|gb|EEG33637.1| hypothetical protein NEIFLAOT_01345 [Neisseria flavescens
NRL30031/H210]
Length = 269
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ L VIACNT + +R +M L + A +AA T++ I I++T T
Sbjct: 66 ENDVKAL-VIACNTIAAVAGQRIRQKAGNMPVLDVISAGAEAALQTTKNNRIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IHS + + ++ +L VEE ++ +++ ++ +
Sbjct: 125 VNSNAYARAIHSKNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLADD---- 180
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 181 IDTLVLGCTHFPLL 194
>gi|320547382|ref|ZP_08041671.1| glutamate racemase [Streptococcus equinus ATCC 9812]
gi|320447978|gb|EFW88732.1| glutamate racemase [Streptococcus equinus ATCC 9812]
Length = 269
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 18/255 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+ ++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVHELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K ++ V ACNTA + E++ + LG + P A T++G
Sbjct: 53 YTWELVNFLLTKNVKMI-VFACNTATAVAWKEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I S + + ++ VE ++ KK +
Sbjct: 111 KIGVIGTPMTINSEVYPEKIKSLSPKMEVSGLACPKFVPIVESN----EMTSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 ESLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPDVKLIDSGAECIRDVSVLLNYFEINH 225
Query: 240 HQTRVFDDHALFLSG 254
++T +H + +
Sbjct: 226 NRTEDVTNHHFYTTA 240
>gi|228993222|ref|ZP_04153143.1| Glutamate racemase [Bacillus pseudomycoides DSM 12442]
gi|228999271|ref|ZP_04158851.1| Glutamate racemase [Bacillus mycoides Rock3-17]
gi|228760468|gb|EEM09434.1| Glutamate racemase [Bacillus mycoides Rock3-17]
gi|228766548|gb|EEM15190.1| Glutamate racemase [Bacillus pseudomycoides DSM 12442]
Length = 271
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 14/262 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + ++
Sbjct: 8 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQ-FTWEMTEY 66
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ + +G + P + A T + + I+ T
Sbjct: 67 LLALDIKMLVIACNTATAVVLEEMQKQL-KIPVVGVIHPGSRTALKVTNTYHVGIIGTIG 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189
T++ + + S ++ +V S+ VE G E E+ E+ ++ +
Sbjct: 126 TVKSGAYEDALKSINNRV---MVESLACPPFVELVESG--NFESEMAYEVVRETLQPLKN 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFD 246
D ++L CTHYP++ V +++ V + + D AR +L +N + +
Sbjct: 181 TEIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ--S 238
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
DH +GK D+ + FG
Sbjct: 239 DHLFLTTGKIDLFKEIASKWFG 260
>gi|229006826|ref|ZP_04164459.1| Glutamate racemase [Bacillus mycoides Rock1-4]
gi|228754448|gb|EEM03860.1| Glutamate racemase [Bacillus mycoides Rock1-4]
Length = 265
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 118/261 (45%), Gaps = 12/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + ++
Sbjct: 2 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQ-FTWEMTEY 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ + +G + P + A T + + I+ T
Sbjct: 61 LLALDIKMLVIACNTATAVVLEEMQKQL-KIPVVGVIHPGSRTALKVTNTYHVGIIGTIG 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 TVKSGAYEDALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPL----KNT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDD 247
D ++L CTHYP++ V +++ V + + D AR +L +N + + D
Sbjct: 176 EIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQ--SD 233
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
H +GK D+ + FG
Sbjct: 234 HLFLTTGKIDLFKEIASKWFG 254
>gi|329956144|ref|ZP_08296867.1| glutamate racemase [Bacteroides clarus YIT 12056]
gi|328524730|gb|EGF51788.1| glutamate racemase [Bacteroides clarus YIT 12056]
Length = 279
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 9 EKKLQNS---ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
++KL +S I +FDSG GGL +L K+R +PEY ++Y+ D+ PYG + + +
Sbjct: 2 KQKLPSSPGPIGVFDSGYGGLTILSKIREALPEYDYVYLGDNARAPYGTRSFEVVYEFTL 61
Query: 66 FLFSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + + L ++ACNTA ++ ++L P+ LG + P ++ T+
Sbjct: 62 QAVTKLFE-MGCHLVILACNTASAKALRSIQINDLPHLDPARRVLGVIRPTVECIGNITR 120
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
S + +L+T T++ IH + + + S VE + I+K
Sbjct: 121 SRHVGVLATGGTIKSESYPLEIHKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFIRKY 180
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
I + + D +L CTHYP+++ RQ P
Sbjct: 181 INELLAKD--REIDTAILGCTHYPILLPKIRQYMP 213
>gi|331092253|ref|ZP_08341081.1| glutamate racemase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401685|gb|EGG81264.1| glutamate racemase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 276
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG+GGL V++++ +P + +Y D PYG+ + K+ + FL +
Sbjct: 11 IGVFDSGVGGLTVVKEIMQNLPNENLVYFGDTARVPYGSKSVDTIIRFSKQIVRFLQT-- 68
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
K + + VIACNT L D LR + +G V P K AA T++ + I+ T A
Sbjct: 69 -KKVKAI--VIACNTVSALALDILRQE-TDIPIIGVVKPGSKVAAEVTENKRVGIIGTEA 124
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I Y + + + VEE +I + I + E +
Sbjct: 125 TVKSGVYTKFIQQYKPDIEVLAKACPLFVPLVEEGFVDNRIAREAIDYYLH----EMKQS 180
Query: 191 RTDVIVLACTHYPLI 205
D ++L CTHYPL+
Sbjct: 181 GIDTLILGCTHYPLL 195
>gi|332881250|ref|ZP_08448900.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332680626|gb|EGJ53573.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 281
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 28/237 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L ++R LMP+Y ++Y+ D+ PYG + + + D
Sbjct: 12 IGVFDSGYGGLTILHEIRQLMPQYDYLYLGDNARTPYGTRSFEVVYEFTREAVQKLFD-L 70
Query: 76 QPVLSVIACNTA------------FTLIKDELRSTF----PSMAFLGAVPAIKQAAAYTQ 119
L ++ACNTA ++ E R P+ +G + +
Sbjct: 71 GCHLVILACNTASAKALKTIQQNDLPQMEGETRRVLGVIRPTAECIGQITHSRHVGILAT 130
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SG IS S P +R+ Y ++ + LV + S +Y ++K
Sbjct: 131 SGTISSGSYPLEIRKLYPDIVVSGEACPMWVPLVENYEYDSPGADYF---------VEKR 181
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
I G + K+ D I+L CTHYPL+++ + +P V + + +A + L R
Sbjct: 182 I-GNLLRKD-PAIDTIILGCTHYPLLLNKILKYTPRNVRIVPQGEYVAYSLKDYLQR 236
>gi|328554458|gb|AEB24950.1| glutamate racemase [Bacillus amyloliquefaciens TA208]
Length = 271
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 11/248 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 60
Query: 72 LDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L+ + + VIACNTA + ++D R T + +G + P + A T++ I ++ T
Sbjct: 61 LENHHIKMLVIACNTATAIALEDIQRKT--DIPVVGVIQPGARTAIKVTKNQHIGVIGTI 118
Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ R Y L+ + + + +L VE + ++ + +E +
Sbjct: 119 NTIKSRAYEQALL-GLNADLQVENTACPLLVPFVESG----RFLQESAAEAVEASLEPLK 173
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDD 247
G D ++L CTHYP++ + V + + D AR +L +Q++ +
Sbjct: 174 GTAIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPE 233
Query: 248 HALFLSGK 255
H +G+
Sbjct: 234 HQFLTTGE 241
>gi|327312842|ref|YP_004328279.1| glutamate racemase [Prevotella denticola F0289]
gi|326944421|gb|AEA20306.1| glutamate racemase [Prevotella denticola F0289]
Length = 279
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 17/233 (7%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFS 69
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + ++ +M LF
Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGSRSFDIVYQFTRQAVMKLFG 68
Query: 70 DILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123
L ++ CNTA T+ +++L + P LG + P + T+S +
Sbjct: 69 -----LGCQLVILGCNTASAKALRTIQQNDLPALDPDRRVLGVIRPTAEIIGRLTRSRHV 123
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T+R + I + V + +E + +KK I+
Sbjct: 124 GLLATEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRID-- 181
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
I + + D ++L CTHYP+++ + P V + + +A R L R
Sbjct: 182 HIMRIDPQIDCLILGCTHYPILMPKILKHVPCGVRIIPQGEYVAESLRDYLRR 234
>gi|328912861|gb|AEB64457.1| Glutamate racemase [Bacillus amyloliquefaciens LL3]
Length = 271
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 114/248 (45%), Gaps = 11/248 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 60
Query: 72 LDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L+ + + VIACNTA + ++D R T + +G + P + A T++ I ++ T
Sbjct: 61 LENHHIKMLVIACNTATAIALEDIQRKT--DIPVVGVIQPGARTAIKVTKNQHIGVIGTI 118
Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ R Y L+ + + ++ +L VE + ++ + +E +
Sbjct: 119 NTIKSRAYEQALL-GLNADLQVENMACPLLVPFVESG----RFLQESAAEAVEASLEPLK 173
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDD 247
G D ++L CTHYP++ + V + + D AR +L +Q++ +
Sbjct: 174 GTAIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPE 233
Query: 248 HALFLSGK 255
H +G+
Sbjct: 234 HQFLTTGE 241
>gi|327439324|dbj|BAK15689.1| glutamate racemase [Solibacillus silvestris StLB046]
Length = 266
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 16/263 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V + + L+P Y+ D PYG + + + +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKAIMELLPNETIYYIGDTARCPYGPRTKQEV-RNFTWEMAKA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPA 130
L+K + VIACNTA + + L+ P LG + A +AA T+ + +L+T
Sbjct: 60 LEKMNVKMLVIACNTATAVALESLQKHMP-FPVLGVINAGARAAIKKTKRNEVVVLATEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ I ++ VE + D + K ++ E +
Sbjct: 119 TIKSGAYEEAVKSLSTKAKIIPLACPTFVPLVESGEYEGQFSYDLVAKGLKPL----EDE 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--- 247
R D ++L CTHYP++ V L +++ A+ +L T Q R ++
Sbjct: 175 RFDTVILGCTHYPILQKQIEAAVGSQVHVLSSAEETAKDVEAILSY--TGQLRTDEEPPK 232
Query: 248 HALFLSGK----PDIAMRRLMQG 266
H L SG IA R L +G
Sbjct: 233 HILHASGSVPIFRSIAERWLEKG 255
>gi|19745519|ref|NP_606655.1| glutamate racemase [Streptococcus pyogenes MGAS8232]
gi|139474362|ref|YP_001129078.1| glutamate racemase [Streptococcus pyogenes str. Manfredo]
gi|24418567|sp|Q8P2D3|MURI_STRP8 RecName: Full=Glutamate racemase
gi|166231061|sp|A2RG97|MURI_STRPG RecName: Full=Glutamate racemase
gi|19747638|gb|AAL97154.1| putative glutamate racemase [Streptococcus pyogenes MGAS8232]
gi|134272609|emb|CAM30876.1| glutamate racemase [Streptococcus pyogenes str. Manfredo]
Length = 264
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + +
Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E+++ + LG V P A T G + ++ TP T
Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190
+ S + + I L++ + +V AC + I E I K+I +
Sbjct: 121 ---VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVG 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246
+ D +VL CTHYPL+ + + + V +D+ R LL N HQ V
Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232
Query: 247 DHALFLSGKPDI 258
+H F + P+I
Sbjct: 233 EHRFFTTANPEI 244
>gi|154501141|ref|ZP_02039179.1| hypothetical protein BACCAP_04830 [Bacteroides capillosus ATCC
29799]
gi|150269833|gb|EDM97368.1| hypothetical protein BACCAP_04830 [Bacteroides capillosus ATCC
29799]
Length = 259
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 9/217 (4%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI--LDKYQPVLS 80
+GGL ++++ LMPE +Y D PYG+ + K + D+ L+ +
Sbjct: 1 MGGLTAVRELIHLMPEEDIVYFGDTGRVPYGSRSRDTIIK---YARQDVAFLNTFDLKAV 57
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
VIAC T T + L P + LG V PA+ +A A T+SG I ++ T AT+R
Sbjct: 58 VIACGTVSTTALEVLEQENP-IPVLGVVRPAVAEAVAATRSGKIGLIGTQATIRTGAYEK 116
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
I + + + + VE K E+ E +++ G D +VL C
Sbjct: 117 YIAKLLPDAQVTARACPLFVPLVENGRFRPGDKVAEMVAEEYLTPLKEAG--VDTLVLGC 174
Query: 200 THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
THYPL+ V V ++ + AR+ +L +
Sbjct: 175 THYPLLSQVIGNFMGPDVKLINTGAACARQVAAMLKK 211
>gi|222530006|ref|YP_002573888.1| glutamate racemase [Caldicellulosiruptor bescii DSM 6725]
gi|222456853|gb|ACM61115.1| glutamate racemase [Caldicellulosiruptor bescii DSM 6725]
Length = 267
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L K
Sbjct: 6 IGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLSKN 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ V+ACNTA + L++ F P +A + P + A T++ I ++ T T+
Sbjct: 66 VKIV-VVACNTASAYAYEALKAKFDVPIVAVIE--PGAEAAVRSTKNKKIGVIGTEGTIS 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + VEE ++ K+ +E E K D
Sbjct: 123 SGAFEKKILELDNSIKVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFNEKAID 178
Query: 194 VIVLACTHYPLIVHVFRQLSP 214
+VL CTHYP + V R++ P
Sbjct: 179 TLVLGCTHYPFLQDVIRKVLP 199
>gi|212697494|ref|ZP_03305622.1| hypothetical protein ANHYDRO_02064 [Anaerococcus hydrogenalis DSM
7454]
gi|212675493|gb|EEB35100.1| hypothetical protein ANHYDRO_02064 [Anaerococcus hydrogenalis DSM
7454]
Length = 249
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70
+I +FDSG+GGL VL+++ +F Y+ D+ PYGN + + K + FL
Sbjct: 3 NIGVFDSGLGGLTVLRELSKKHKANYF-YLGDNKNVPYGNRSNEEIIKLSKDIVRFLIKK 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+D + VIACNT + ELR F IK+A ++G + +++T A
Sbjct: 62 DIDFF-----VIACNTISVVAIKELRKEFDKKFISITDEGIKEA--LNRNGDVFVMATKA 114
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T + +I S+ ++ S L +EE GI + ++I +++ K
Sbjct: 115 TCKNHAYKKIIEGRSSK-KVYEKSCPKLVDYIEE---GI-LSGEKIDSQLKDYLTLANEK 169
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ + I+L CTHYP+I + + + +D + +AR
Sbjct: 170 KIENIILGCTHYPIIKKTIEKNLTYKANIIDPAKVLAR 207
>gi|94989807|ref|YP_597907.1| glutamate racemase [Streptococcus pyogenes MGAS10270]
gi|166231059|sp|Q1JIG0|MURI_STRPD RecName: Full=Glutamate racemase
gi|94543315|gb|ABF33363.1| Glutamate racemase [Streptococcus pyogenes MGAS10270]
Length = 264
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 28/256 (10%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L +
Sbjct: 5 AIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQ 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
++ V ACNTA + +E+++ + LG + P A T G + ++ TP T
Sbjct: 65 NVKMI-VFACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT-- 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIE 186
+ S + + I L++ + +V AC + I E I K+I +
Sbjct: 121 -------VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLS 170
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQT 242
+ D +VL CTHYPL+ + + + V +D+ R LL N HQ
Sbjct: 171 PLVGKIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQK 230
Query: 243 RVFDDHALFLSGKPDI 258
V +H F + P+I
Sbjct: 231 AV--EHRFFTTANPEI 244
>gi|150010273|ref|YP_001305016.1| glutamate racemase [Parabacteroides distasonis ATCC 8503]
gi|301308360|ref|ZP_07214314.1| glutamate racemase [Bacteroides sp. 20_3]
gi|149938697|gb|ABR45394.1| glutamate racemase [Parabacteroides distasonis ATCC 8503]
gi|300833830|gb|EFK64446.1| glutamate racemase [Bacteroides sp. 20_3]
Length = 276
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 29/237 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S + +
Sbjct: 9 IGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSRLFES- 67
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA T+ + +L + P+ LG + P ++ +++ I I+ T
Sbjct: 68 GCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVGTS 127
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186
T+ TSN + + + H+ +V AC + ++ +E F++
Sbjct: 128 GTI----TSNSYTIEIGRMYPHI--------QVTGEACPMWVPLVENNEFNSPGADYFVK 175
Query: 187 KE-------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
K + D ++L CTHYPL++ R P + + +A R L R
Sbjct: 176 KHIDHLLSVDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGR 232
>gi|262199960|ref|YP_003271169.1| glutamate racemase [Haliangium ochraceum DSM 14365]
gi|262083307|gb|ACY19276.1| glutamate racemase [Haliangium ochraceum DSM 14365]
Length = 268
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 13/227 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V++ +R +P+ Y+ D PYG+ +++ + +L++
Sbjct: 8 IGVFDSGVGGLTVVRAVRAALPDRDIAYLGDTARVPYGSKSARTVERYALACQRFLLER- 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L ++ACNTA L + P A A + I ++ T AT+
Sbjct: 67 EVDLVLVACNTASATALPALAAASQVPVVGVVEPGAASAVAASTCMHIGVIGTLATVGSG 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK---EGKRT 192
IH+ + V+ +L EE +D+I + + ++ + +
Sbjct: 127 AYPRAIHALAPGAAVSAVACPLLVPLAEE-----GWVDDDIARAVARRYLARLFEQDAEI 181
Query: 193 DVIVLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARCLLP 235
D +VL CTHYPL+ V + L PV +D++ ++A AR P
Sbjct: 182 DTLVLGCTHYPLLAEVLAETAAALVGHPVAIVDSASAMAEVARAHGP 228
>gi|325859706|ref|ZP_08172836.1| glutamate racemase [Prevotella denticola CRIS 18C-A]
gi|325482632|gb|EGC85635.1| glutamate racemase [Prevotella denticola CRIS 18C-A]
Length = 279
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + ++ +M LF
Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGSRSFDIVYQFTRQAVMKLFG-- 68
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
L ++ CNTA T+ +++L + P+ LG + P + T+S + +
Sbjct: 69 ---LGCQLVILGCNTASAKALRTIQQNDLPALDPNRRVLGVIRPTAEIIGRLTRSRHVGL 125
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T+R + I + V + +E + +KK I+ I
Sbjct: 126 LATEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRID--HI 183
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ + D ++L CTHYP+++ + P V + + +A R L R
Sbjct: 184 MRIDPQIDSLILGCTHYPILMPKILKHVPRGVRIIPQGEYVAESLRDYLRR 234
>gi|260892383|ref|YP_003238480.1| glutamate racemase [Ammonifex degensii KC4]
gi|260864524|gb|ACX51630.1| glutamate racemase [Ammonifex degensii KC4]
Length = 265
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 16/247 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLM-FLFSDI 71
I +FDSG+GGL VL ++ L+P +Y AD + PYG+ E AL R++ FL +
Sbjct: 7 IGLFDSGVGGLTVLAQIVRLLPHESIVYFADTLNLPYGDKTPAELIALGDRIIRFLLAQG 66
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130
+ V ACNT+ ++ + L+ +P + LG + A + A ++ G I IL+T A
Sbjct: 67 VK-----CVVFACNTSSSISLEVLQQRYP-VPMLGLLQAGARLALKSSRRGRIGILATAA 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I Q + ++ L +E +I E + + +
Sbjct: 121 TVKSGAYEKAIKDLCPQAQVFSQAAPRLVPLIESG----EIDTPEAEAALREYLTPLKEA 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++ CTHYP + + V +D + ++ + LL + H +
Sbjct: 177 GIDTLIFGCTHYPFLAPLISSFMGPGVALVDPAVAVVEELKELLSQKGLLANST-PFHRI 235
Query: 251 FLSGKPD 257
F+SG P+
Sbjct: 236 FVSGDPE 242
>gi|167747288|ref|ZP_02419415.1| hypothetical protein ANACAC_02002 [Anaerostipes caccae DSM 14662]
gi|167653266|gb|EDR97395.1| hypothetical protein ANACAC_02002 [Anaerostipes caccae DSM 14662]
Length = 272
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V +++ +P+ IY D PYG + + + + +L K
Sbjct: 10 IGVFDSGVGGLTVAREIMRQLPDESLIYFGDTARVPYGTKSKDTVIRYSRQIVNFLLSKN 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA L +L+ + + +G V P AA T++ I I+ T AT++
Sbjct: 70 VKAI-VIACNTASALAMHKLQQEY-IVPMIGMVRPGAIAAARATKNHHIGIIGTNATVKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + VEE +I ED + + + E + + D
Sbjct: 128 GQYGKYLRELNPDVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYLR----EFDQYQIDS 183
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++L CTHYPL+ + + V ++ + A+ R LL
Sbjct: 184 LILGCTHYPLLQNPIKNFVGDNVTLINPAYETAKSLRELL 223
>gi|224823853|ref|ZP_03696962.1| glutamate racemase [Lutiella nitroferrum 2002]
gi|224604308|gb|EEG10482.1| glutamate racemase [Lutiella nitroferrum 2002]
Length = 270
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 14/233 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GGL V++ + +P IY D PYG + A + +
Sbjct: 4 KARRPIGVFDSGVGGLTVVRALMDRLPFEDIIYFGDTARVPYG-VKSVATIRAFSRQIVE 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTP 129
L +++ V+ACNT + +++R + +G + A QAA +++ I +++T
Sbjct: 63 FLLQHEVKALVVACNTISAVALEQVRELAGDIPVIGVIEAGAQAAVKVSKNHEIGVIATS 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE----YACGIKIKEDEIKKEIEGCFI 185
T+ + IH + ++ + + VEE + E+ +K +E
Sbjct: 123 TTINSNAYAREIHRLMPDARVYSQACPLFVPLVEEGWVDHPVTRLTAEEYLKTVLE---- 178
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYPLI + +++ V+ +D++ + A +L +N
Sbjct: 179 ----EHVDTLVLGCTHYPLIKPLLTEVTGGRVELVDSALTTAEATAEVLAGLN 227
>gi|152967707|ref|YP_001363491.1| glutamate racemase [Kineococcus radiotolerans SRS30216]
gi|151362224|gb|ABS05227.1| glutamate racemase [Kineococcus radiotolerans SRS30216]
Length = 282
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 8/222 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I IFDSG+GGL V + + +P YV D PYG + A +RL
Sbjct: 3 PARPDADLPIGIFDSGVGGLTVARAVLDQLPHEAVHYVGDTAHAPYGP-KPIAEVRRLAL 61
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
D L + + VIACN+A + + R + PA+++A T++G + ++
Sbjct: 62 DVLDRLVESGVKMLVIACNSASAAMLRDARERYDVPVVEVIQPAVRRAVRATRNGRVGVI 121
Query: 127 STPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
T AT+ R Y ++ + H+ L ++ A VE G+ E+ G
Sbjct: 122 GTRATISSRAYED----AFAAAPHLALTTAACPAF-VEFVERGVT-SGPELLTAARGYLA 175
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTHYPL++ V R + V + +++ A
Sbjct: 176 PAIAADVDTLVLGCTHYPLLMAVLRSVVGDDVTLVSSAEETA 217
>gi|121637269|ref|YP_977492.1| glutamate racemase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224989743|ref|YP_002644430.1| glutamate racemase [Mycobacterium bovis BCG str. Tokyo 172]
gi|166231041|sp|A1KIC8|MURI_MYCBP RecName: Full=Glutamate racemase
gi|254766119|sp|C1AMY3|MURI_MYCBT RecName: Full=Glutamate racemase
gi|121492916|emb|CAL71387.1| Probable glutamate racemase murI [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224772856|dbj|BAH25662.1| glutamate racemase [Mycobacterium bovis BCG str. Tokyo 172]
Length = 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 13/236 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ +
Sbjct: 10 VFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVGRGVK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACN+A + + R + +PA+++A A T++G I ++ T R T T
Sbjct: 70 AL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGT----RATIT 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
S+ + ++++ V+ G+ ++ +G + D +VL
Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVELGVT-SGRQVLGLAQGYLEPLQRAEVDTLVL 183
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-------THQTRVFD 246
CTHYPL+ + + V + +++ A+ +L I+ TR+F+
Sbjct: 184 GCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFE 239
>gi|256839107|ref|ZP_05544617.1| glutamate racemase [Parabacteroides sp. D13]
gi|262382441|ref|ZP_06075578.1| glutamate racemase [Bacteroides sp. 2_1_33B]
gi|256740026|gb|EEU53350.1| glutamate racemase [Parabacteroides sp. D13]
gi|262295319|gb|EEY83250.1| glutamate racemase [Bacteroides sp. 2_1_33B]
Length = 276
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 29/237 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S + +
Sbjct: 9 IGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSRLFES- 67
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA T+ + +L + P+ LG + P ++ +++ I I+ T
Sbjct: 68 GCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVGTS 127
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186
T+ TSN + + + H+ +V AC + ++ +E F++
Sbjct: 128 GTI----TSNSYTIEIGRMYPHI--------QVTGEACPMWVPLVENNEFNSPGADYFVK 175
Query: 187 KE-------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
K + D ++L CTHYPL++ R P + + +A R L R
Sbjct: 176 KHIDHILSVDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGR 232
>gi|257056887|ref|YP_003134719.1| glutamate racemase [Saccharomonospora viridis DSM 43017]
gi|256586759|gb|ACU97892.1| glutamate racemase [Saccharomonospora viridis DSM 43017]
Length = 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P YV D + PYG +++ + ++
Sbjct: 11 IGIFDSGVGGLTVARAVADQLPAERLRYVGDTLHAPYGPLPIARVRELALRALDGLVADG 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-R 134
L VIACNTA + R + F +PA ++A A T++G + ++ T T+R R
Sbjct: 71 VKAL-VIACNTASAACLRDARERYDIPVFEVVLPAARRAVATTRNGHVGLIGTEGTVRSR 129
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y L + V +SS+ VE G+ +I +G D
Sbjct: 130 AYDDALAATGVR------LSSVACPRFVEFVERGVTSGR-QILGLAQGYLEPLTRADVDT 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++L CTHYPL+ V + + V + +++ A+
Sbjct: 183 LILGCTHYPLLTGVLQTVMGPDVTLVSSAEETAK 216
>gi|295092631|emb|CBK78738.1| glutamate racemase [Clostridium cf. saccharolyticum K10]
Length = 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 13/223 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILD 73
I +FDSG+GGL V +++ MPE +Y D PYG + + R + F L
Sbjct: 7 IGVFDSGVGGLTVAREIMRQMPEEKLVYFGDTARVPYGTKSQETVIRYSRQIIRF---LR 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + + + +G + A K A T++ I I+ T AT+
Sbjct: 64 TKEVKAIVIACNTATACALETVEKDL-DIPIIGVIHAGAKAAVEATKNRKIGIIGTEATI 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191
R + L+ + + VEE + D + EI ++ + K
Sbjct: 123 RSGVYTELMKQMNPAIEVTGKPCPLFVPLVEE-----GLLHDSVTDEIASRYLASLKEKY 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +V+ CTHYPL+ +L V ++ + AR + LL
Sbjct: 178 IDTLVMGCTHYPLLRSTLARLMGEEVTLINPAYETARELKSLL 220
>gi|255012458|ref|ZP_05284584.1| glutamate racemase [Bacteroides sp. 2_1_7]
Length = 276
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 29/237 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S + +
Sbjct: 9 IGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSRLFES- 67
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA T+ + +L + P+ LG + P ++ +++ I I+ T
Sbjct: 68 GCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVGTS 127
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIE 186
T+ TSN + + + H+ +V AC + ++ +E F++
Sbjct: 128 GTI----TSNSYTIEIGRMYPHI--------QVTGEACPMWVPLVENNEFNSPGADYFVK 175
Query: 187 KE-------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
K + D ++L CTHYPL++ R P + + +A R L R
Sbjct: 176 KHIDHILSVDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGR 232
>gi|323142469|ref|ZP_08077289.1| glutamate racemase [Phascolarctobacterium sp. YIT 12067]
gi|322413046|gb|EFY03945.1| glutamate racemase [Phascolarctobacterium sp. YIT 12067]
Length = 267
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL VL+ + ++P FIYV D PYG + ++ + + D L
Sbjct: 7 IGVLDSGVGGLSVLKCLHQMLPYEDFIYVGDTARTPYGTRSEQEIRGFVGEII-DWLAAK 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNT L D LR T P +G +Q A + + I +L+T T+
Sbjct: 66 NVKQVVIACNTLTMLGVDSLRGTHP-FGVVGMSKGAQQLLAASPNKKIGVLATQFTIASG 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I + +Q ++ V+ +E G + E+++ I + + +
Sbjct: 125 LHKKAILAADAQAQVYPVACPKFVPLIE----GERFDSPELQQAIAEYTEPFKKAGVEAV 180
Query: 196 VLACTHYPLI 205
+L+CTHYP I
Sbjct: 181 ILSCTHYPFI 190
>gi|329941791|ref|ZP_08291056.1| glutamate racemase [Streptomyces griseoaurantiacus M045]
gi|329299508|gb|EGG43408.1| glutamate racemase [Streptomyces griseoaurantiacus M045]
Length = 261
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 81/196 (41%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D G P+G L R + + +
Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLVLSSDPEGMPWGPRTPEDLTVRALAVAE-AAAAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ P + +G VPAIK AAA G +I +TPAT
Sbjct: 62 RPDALIVACNTASVHTLPTLRARLEPGLPVIGTVPAIKPAAA--GGGPFAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + + V+ LA V+ G T V
Sbjct: 120 PYQRGLIEEFAAGLDVAEVACPGLAEAVQHADEAAIDAAIADA------AARTPGDVTTV 173
Query: 195 IVLACTHYPLIVHVFR 210
VL CTHY L+ R
Sbjct: 174 -VLGCTHYELVAERIR 188
>gi|325847040|ref|ZP_08169866.1| glutamate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481012|gb|EGC84057.1| glutamate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 248
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70
+I +FDSG+GGL VL+++ +F Y+ D+ PYGN + + K + FL
Sbjct: 3 NIGVFDSGLGGLTVLRELSKKHKANYF-YLGDNKNVPYGNKSNEEIIKLSKDIVKFLIKK 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+D + VIACNT + ELR F IK+A ++G + +++T A
Sbjct: 62 DIDFF-----VIACNTISVVAIKELREEFDKKFISITDEGIKEA--LNKNGDVFVMATKA 114
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T + +I S+ ++ S L +EE GI + ++I +++ K
Sbjct: 115 TCKNHAYKKIIEGRSSK-KVYEESCPKLVDYIEE---GI-LSGEKIDSQLKDYLTIANEK 169
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ + I+L CTHYP+I + + + +D + +AR
Sbjct: 170 KIENIILGCTHYPIIKKTIEKNLTYKANIIDPAKVLAR 207
>gi|317471031|ref|ZP_07930406.1| Asp/Glu/Hydantoin racemase [Anaerostipes sp. 3_2_56FAA]
gi|316901472|gb|EFV23411.1| Asp/Glu/Hydantoin racemase [Anaerostipes sp. 3_2_56FAA]
Length = 272
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V +++ +P+ IY D PYG + + + + +L K
Sbjct: 10 IGVFDSGVGGLTVAREIMRQLPDESMIYFGDTARVPYGTKSKDTVIRYSRQIVNFLLSKN 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA L +L+ + + +G V P AA T++ I I+ T AT++
Sbjct: 70 VKAI-VIACNTASALAMHKLQQEY-IVPMIGMVRPGAIAAARATKNHHIGIIGTNATVKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + VEE +I ED + + + E + + D
Sbjct: 128 GQYGKYLRELNPDVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYLR----EFDQYQIDS 183
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++L CTHYPL+ + + V ++ + A+ R LL
Sbjct: 184 LILGCTHYPLLQNPIKNFVGDNVTLINPAYETAKSLRELL 223
>gi|288959026|ref|YP_003449367.1| glutamate racemase [Azospirillum sp. B510]
gi|288911334|dbj|BAI72823.1| glutamate racemase [Azospirillum sp. B510]
Length = 299
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 22/238 (9%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++L+ I +FDSG GGL VL+ + P F+Y+ D PYG + + RL
Sbjct: 15 RRLKQLIGVFDSGHGGLTVLRALVDAAPGRPFVYLGDHAAAPYGPRSEDDI-YRLTIAGM 73
Query: 70 DILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
D L L VIACNTA L ++ L S P LG + + A T+ +
Sbjct: 74 DRLFAQGCRLVVIACNTAAAVALRRLQQEWLPSAHPGRNVLGVL--VPMVEAITRVPWMI 131
Query: 125 ILSTPATLRRTYTSNLIHSYV---SQCHIHLVSSMILASRVEEYACGIKIK-------ED 174
P L T + + S + + RV + AC + +
Sbjct: 132 DTVPPDHLAEPRTVGIFATLATVNSGSFPREIGKRAPSVRVVQQACPDLVPLIERGAADG 191
Query: 175 EIKKEIEG---CFIEKEGKRT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
EI+ + G ++K G++ D +VL CTHYPL+ H+F + P V+ L AR
Sbjct: 192 EIEPAVAGYVRVLLDKLGRQPLDAVVLGCTHYPLVRHLFARALPPGVEILSQPTLTAR 249
>gi|11386940|sp|Q9L4V5|MURI_CARST RecName: Full=Glutamate racemase
gi|8102037|gb|AAF72713.1|AF263927_1 glutamate racemase [Carnobacterium sp. St2]
Length = 268
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 11/229 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V+++ +P YV D PYG + ++K + +L
Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEDQVRKFTWEMTHFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
DK +L VIACNTA +++ ++ +G + P + A T + I ++ T T
Sbjct: 63 DKNIKML-VIACNTATAAALKDIKKKL-AIPVIGVILPGSRAAIKATHTNRIGVIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEG 189
++ +IHS ++ + ++ VE EY+ I KK + +
Sbjct: 121 VKSNQYKKMIHSKDTKALVTSLACPKFVPLVESNEYSSAIA------KKVVAETLRPLKN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D ++L CTHYPL+ + + V +D+ +L N
Sbjct: 175 EGLDTLILGCTHYPLLRPIIQNTLGDSVTLIDSGAETVSEVSTILDYFN 223
>gi|119490901|ref|ZP_01623184.1| glutamate racemase [Lyngbya sp. PCC 8106]
gi|119453719|gb|EAW34878.1| glutamate racemase [Lyngbya sp. PCC 8106]
Length = 284
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 9/212 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I +FDSG+GGL VL+++ +P +Y D PYG + + + +
Sbjct: 5 KKARKIAVFDSGVGGLTVLRELYQQLPNESILYFGDTARLPYGTRSQSEILQFVREIIIW 64
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+D+ ++ V+ACNT+ L + ++S F ++ LG + P K AA + I +++TP
Sbjct: 65 AIDQDVKMI-VMACNTSSALALETVQSEF-NVPILGVILPGAK--AAVQKGRRIGVIATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ I + + VS +E+ +I + + +
Sbjct: 121 ATVTSNAYRQAIQEMDATVQVWQVSCPEFVPLIEQN----RIHDPYTYQVAQEYLAPLLD 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
+R D ++ CTHYP + V R L P V +D
Sbjct: 177 QRIDTLIYGCTHYPHLAPVLRSLLPPSVQLVD 208
>gi|300775208|ref|ZP_07085070.1| glutamate racemase [Chryseobacterium gleum ATCC 35910]
gi|300505948|gb|EFK37084.1| glutamate racemase [Chryseobacterium gleum ATCC 35910]
Length = 276
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 8/223 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V ++++ L+P IY D PYG A+ + + + +L++
Sbjct: 17 IGIFDSGVGGLTVAKEIKRLLPNEDLIYFGDTKHLPYGEKSREAIIEYSTKITNFLLEQN 76
Query: 76 QPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA +E ++S + + + + + +Y + +++T AT+
Sbjct: 77 CKAI-VIACNTATANALNEVMQSVAGRVPVIDVINPVAEKVSYEIHNNVGVIATKATVNS 135
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRTD 193
I + + +++ +L +EE K I I ++ K +
Sbjct: 136 GLYKKSIRKHNKWIKVDELATPLLVPAIEE-----GFKNHPITHAIIYNYLSNSKLKNIE 190
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++L CTHYPL++ +Q V +D+ + +A + ++ +
Sbjct: 191 TLILGCTHYPLLIDEIKQYYGNRVRVIDSPNIVANHLKIIMDK 233
>gi|6980778|pdb|1B73|A Chain A, Glutamate Racemase From Aquifex Pyrophilus
gi|6980779|pdb|1B74|A Chain A, Glutamate Racemase From Aquifex Pyrophilus
Length = 254
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 9/212 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R + +Y+ D PYG + + + + DK
Sbjct: 3 IGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA + L+ F P +K+A +++ I ++ TPAT++
Sbjct: 63 VDII-VVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + + A EE + E EI +++ ++++ + D +
Sbjct: 122 AYQRKLEE--GGADVFAKACPLFAPLAEE-----GLLEGEITRKVVEHYLKEFKGKIDTL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+L CTHYPL+ ++ + +D+S++++
Sbjct: 175 ILGCTHYPLLKKEIKKFL-GDAEVVDSSEALS 205
>gi|56808577|ref|ZP_00366308.1| COG0796: Glutamate racemase [Streptococcus pyogenes M49 591]
gi|94987933|ref|YP_596034.1| glutamate racemase [Streptococcus pyogenes MGAS9429]
gi|94991817|ref|YP_599916.1| glutamate racemase [Streptococcus pyogenes MGAS2096]
gi|209558858|ref|YP_002285330.1| glutamate racemase [Streptococcus pyogenes NZ131]
gi|166231057|sp|Q1JDD6|MURI_STRPB RecName: Full=Glutamate racemase
gi|166231058|sp|Q1JNA9|MURI_STRPC RecName: Full=Glutamate racemase
gi|226707592|sp|B5XJX3|MURI_STRPZ RecName: Full=Glutamate racemase
gi|94541441|gb|ABF31490.1| glutamate racemase [Streptococcus pyogenes MGAS9429]
gi|94545325|gb|ABF35372.1| Glutamate racemase [Streptococcus pyogenes MGAS2096]
gi|209540059|gb|ACI60635.1| Glutamate racemase [Streptococcus pyogenes NZ131]
Length = 264
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 28/252 (11%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + +
Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E+++ + LG V P A T G + ++ TP T
Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190
+ S + + I L++ I +V AC + I E I K+I +
Sbjct: 121 ---VASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVG 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246
+ D +VL CTHYPL+ + + + V +D+ R LL N HQ V
Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232
Query: 247 DHALFLSGKPDI 258
H F + P+I
Sbjct: 233 KHRFFTTANPEI 244
>gi|219684903|ref|ZP_03539845.1| glutamate racemase [Borrelia garinii PBr]
gi|219671848|gb|EED28903.1| glutamate racemase [Borrelia garinii PBr]
Length = 304
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIVFDSGIGGLSYFKYIKNKIDRYQYVYVADNKNFPYGEKSSEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+++L + Y ++ACNT + ++L FP + L V I A +
Sbjct: 100 ILYLIEKLNKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSLISDLAL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKK 178
+++T TL + + Q ++H +I+ + E EY G K ++D ++
Sbjct: 156 LLIATNTTLESKFVKD-------QVNMH--DDLIVKAAGELVNFVEY--GEKYRKDALRC 204
Query: 179 EIEGCFIEKEGKRTDVIVLACTHY 202
+E E +++ L CTHY
Sbjct: 205 -LEALKFEVVNTDREIVFLGCTHY 227
>gi|289706341|ref|ZP_06502699.1| glutamate racemase [Micrococcus luteus SK58]
gi|289556836|gb|EFD50169.1| glutamate racemase [Micrococcus luteus SK58]
Length = 310
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P +YV D PYG ++ + + +++ +
Sbjct: 14 IGVFDSGVGGLTVARAIMDQLPHESILYVGDTEHSPYGPRPIAEVRALALAIMDELVARG 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
L VIACN+A + + R + + + PA+++A A T++G I ++ T AT
Sbjct: 74 VKAL-VIACNSASAAVLRDARERYTGGHGIPVIEVIQPAVRRAVAATRTGRIGVIGTEAT 132
Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKE 188
+ R Y S+ + H+ ++S+ VE GI + E +E
Sbjct: 133 VGSRAYED----SFSAAPHLE-ITSVACPRFVEFVEAGITTGPELLETAREYTAPL---R 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYPL+ + V + +++ A+
Sbjct: 185 AAGVDTLVLGCTHYPLLTGALSLVMGEDVTLVSSAEETAK 224
>gi|218438768|ref|YP_002377097.1| glutamate racemase [Cyanothece sp. PCC 7424]
gi|226722981|sp|B7KCC4|MURI_CYAP7 RecName: Full=Glutamate racemase
gi|218171496|gb|ACK70229.1| glutamate racemase [Cyanothece sp. PCC 7424]
Length = 278
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 13/248 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL--FSD 70
++ I IFDSG+GGL VL+++ +P +Y AD PYG + + L F+ D
Sbjct: 6 RSPIGIFDSGVGGLTVLRELYRRLPNESILYFADTARLPYGT---RSAGEILQFVREIMD 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTP 129
+ Q + ++ACNT+ L + +R F ++ LG + + A A Q G I +++TP
Sbjct: 63 WMTSQQVKMVIMACNTSSALALEAIRDEF-ALPVLGVI--LPGARAAVQKGKRIGVIATP 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT I S + V +E+ + E+ K+ ++
Sbjct: 120 ATAASNAYRQAIEEIDSTAQVWQVGCPDFVPLIEQNRL-YEPYTKEVAKQYLNPLLQVN- 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +V CTHY + +FRQ+ P + +D + + A L + T
Sbjct: 178 --IDTLVYGCTHYRHLEPLFRQILPPSISLVDPAQYVVSAAEKELELLGLKSTLPCLPTR 235
Query: 250 LFLSGKPD 257
+SG P+
Sbjct: 236 FCVSGNPE 243
>gi|116235003|dbj|BAF34941.1| putative glutamate racemase [Hydrogenobacter thermophilus]
Length = 206
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL++++ P +Y+ D PYG + R ++ L ++
Sbjct: 5 VFDSGVGGLTVLKEIKKAFPSLDLVYLGDTARVPYGGKSKDTI-IRYSLECAEFLIRFDI 63
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR-TY 136
L V+ACNTA + D L+ F P +++A +++ +I ++ T +T++ Y
Sbjct: 64 DLLVVACNTASSYALDILKKELGIPVFGVIKPGVRKALEVSKNKVIGVIGTKSTIKSGVY 123
Query: 137 TSNLIHS----YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L+ + Y C + + VEE G+ D + K ++ + + +
Sbjct: 124 QRSLMEAGSVVYAKACPLFV-------PLVEE---GLT-HGDIVDKVVDFYLRDFKNTQM 172
Query: 193 DVIVLACTHYPLIVHVFRQ 211
D ++L CTHYPL+ +
Sbjct: 173 DTLILGCTHYPLLAEAIKN 191
>gi|4996220|dbj|BAA78374.1| D-glutamate racemase [Corynebacterium glutamicum]
Length = 284
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++
Sbjct: 24 IGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADELVERG 83
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 84 CKMI-VIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTINSG 142
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----IKIKEDEIKKEIEGCFIEKEGKR 191
+L + S ++ V+ VE + I +D ++ ++ EG
Sbjct: 143 AYQDLFSASPS-IEVNAVACPRFVDFVERGITSGRQILNIAQDYLEP------LQAEG-- 193
Query: 192 TDVIVLACTHYPLIVHVFR 210
D +VL CTHYPL+ V +
Sbjct: 194 VDTLVLGCTHYPLLSGVIQ 212
>gi|30019021|ref|NP_830652.1| glutamate racemase [Bacillus cereus ATCC 14579]
gi|229126278|ref|ZP_04255296.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
gi|29894563|gb|AAP07853.1| Glutamate racemase [Bacillus cereus ATCC 14579]
gi|228657270|gb|EEL13090.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
Length = 276
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA EL+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLEVHSYACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|51598363|ref|YP_072551.1| glutamate racemase [Borrelia garinii PBi]
gi|51572934|gb|AAU06959.1| glutamate racemase [Borrelia garinii PBi]
Length = 260
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I++FDSGIGGL + ++ M Y ++YVAD+ FPYG L + +++L
Sbjct: 2 KNFKEVIIVFDSGIGGLSYFKYIKNKMDGYQYVYVADNKNFPYGEKSSEYLLEAVLYLIE 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ Y ++ACNT + ++L FP + L V +I + +++T
Sbjct: 62 KLNKIYNISALILACNTISVSVYNKLNFIFPVVYTLPEVSSISDLVL----KRVLLIATN 117
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184
TL + + Q ++H + +I+ + E EY G K ++D I+ +E
Sbjct: 118 TTLESKFVKD-------QVNMH--NDLIIKAAGELVNFVEY--GEKYRKDAIRC-LEALK 165
Query: 185 IEKEGKRTDVIVLACTHY 202
E +++ L CTHY
Sbjct: 166 FEVVNTGREIVFLGCTHY 183
>gi|227833923|ref|YP_002835630.1| Glutamate racemase [Corynebacterium aurimucosum ATCC 700975]
gi|262184926|ref|ZP_06044347.1| glutamate racemase [Corynebacterium aurimucosum ATCC 700975]
gi|227454939|gb|ACP33692.1| Glutamate racemase [Corynebacterium aurimucosum ATCC 700975]
Length = 258
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P+ IY+ D PYG +++ + ++++
Sbjct: 6 SPIGIFDSGVGGLTVARTIIEQLPDESIIYIGDTAHAPYGPRPIAQVRELSTAIADELVE 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ +L VIACNTA + R + PA+++A A T++G I ++ T T+
Sbjct: 66 RGCKML-VIACNTATAAFLHDARERYDIPVVEVIRPAVRRAIATTRNGKIGVIGTEGTIN 124
Query: 134 RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+L + C ++ V I A R +I EG
Sbjct: 125 SGAYQDLFAVNPNVECEAVACPDFVNFVERGITAGR-------------QILGVAEGYLA 171
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFR 210
+ D +VL CTHYPL+ V +
Sbjct: 172 PLQSAGVDTLVLGCTHYPLLTGVIQ 196
>gi|283796789|ref|ZP_06345942.1| glutamate racemase [Clostridium sp. M62/1]
gi|291075679|gb|EFE13043.1| glutamate racemase [Clostridium sp. M62/1]
gi|295115201|emb|CBL36048.1| glutamate racemase [butyrate-producing bacterium SM4/1]
Length = 271
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILD 73
I +FDSG+GGL V +++ MPE +Y D PYG + + R + F L
Sbjct: 7 IGVFDSGVGGLTVAREIMRQMPEEKLVYFGDTARVPYGTKSQETVIRYSRQIIRF---LR 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATL 132
+ VIACNTA + + + +G + A +AA T++ I I+ T AT+
Sbjct: 64 TKEVKAIVIACNTATACALETVEKDL-DIPIIGVIHAGARAAVEATKNRKIGIIGTEATI 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191
R + L+ + + VEE + D + EI ++ + K
Sbjct: 123 RSGVYTELMKQMNPAIEVTGKPCPLFVPLVEE-----GLLHDSVTDEIASRYLASLKEKY 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +V+ CTHYPL+ +L V ++ + AR + LL
Sbjct: 178 IDTLVMGCTHYPLLRSTLARLMGEEVTLINPAYETARELKSLL 220
>gi|291458619|ref|ZP_06598009.1| glutamate racemase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291419152|gb|EFE92871.1| glutamate racemase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 279
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKR-LMFLFSDI 71
I IFDSG+GG+ V++ ++ +P I+ D PYG E AL +R FL
Sbjct: 22 IGIFDSGVGGISVVKALKRELPGEDLIFFGDSKNAPYGEKSVEEIRALSERSYQFLRGQR 81
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTP 129
+ VIACNTA + + LR P +G PA+K A A + I +L+T
Sbjct: 82 VKAV-----VIACNTATSAAAELLREENPGEIIVGMEPALKPAIENAGRERPEILVLATS 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSS-----MILASRVEEYACGIKIKE--DEIKKEIEG 182
+TL L +H + + M+ A R + ++E ++ +G
Sbjct: 137 STLGGERFHKLAARLGMGARVHSLPAPEIVRMVEAGREDSDEMRSYLRELLRPYRRMADG 196
Query: 183 ---CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
C + D +VL CTH+P R++ +PV D ++ AR
Sbjct: 197 TIRCPL-------DGLVLGCTHFPFAKRAIREVLSYPVPIYDGAEGTAR 238
>gi|241895985|ref|ZP_04783281.1| glutamate racemase [Weissella paramesenteroides ATCC 33313]
gi|241870716|gb|EER74467.1| glutamate racemase [Weissella paramesenteroides ATCC 33313]
Length = 277
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 8/217 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIGGL V+++ +P+ Y+ D PYG +KK + D L +
Sbjct: 9 LDSGIGGLSVVKQALKQLPDEQVYYIGDTARMPYGPRTSDEVKK-FTWQLVDFLMEKDIK 67
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA D+L P + +G + P + A+ T+S I I++T T+
Sbjct: 68 LLVVACNTATAATLDDLIKYLP-IPVVGVIQPGVDAASQVTESNNIGIIATQGTVNSMAY 126
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + H+ +++ L E+ + E + + + + + D +VL
Sbjct: 127 YDGLKKINADFHVLQLATPTLVKIAEQP----EKNELTVNQVVTKVLLPIKASGIDTLVL 182
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLD-NSDSIARRARCL 233
CTH+PL+ ++ V +D + +IA A+ L
Sbjct: 183 GCTHFPLLAKFIQESVGEQVKLVDPGTSTIAAVAQIL 219
>gi|332300836|ref|YP_004442757.1| Glutamate racemase [Porphyromonas asaccharolytica DSM 20707]
gi|332177899|gb|AEE13589.1| Glutamate racemase [Porphyromonas asaccharolytica DSM 20707]
Length = 281
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 26/235 (11%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++++ I +FDSG GGL +L+K++ +P+Y F+Y+ D+ PYG+ + +
Sbjct: 2 QQIEGPIGVFDSGYGGLTILRKLQEQLPQYDFVYLGDNARSPYGSRSMRVVYQFTREAVE 61
Query: 70 DILDKYQPVLSVIACNTAFT-LIKDELRSTFPSM-------AFLGAV-PAIKQAAAYTQS 120
+ D P L ++ACNTA ++ + P + LG + P ++ T +
Sbjct: 62 RLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTGT 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE----- 175
+ IL+T T+ SYV++ H ++ + ++ E +
Sbjct: 121 KHVGILATEGTVSS-------ESYVTEIHKLYPDVTVVQEACPLWVPIVETGESDSPGAD 173
Query: 176 --IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++K +E + E + D I+L CTHYP+++ R+L + + + +A+
Sbjct: 174 FFVRKHLERLLAQDE--KIDTIILGCTHYPILMPKIRRLLTPTIKVVSQGELVAK 226
>gi|271963270|ref|YP_003337466.1| glutamate racemase [Streptosporangium roseum DSM 43021]
gi|270506445|gb|ACZ84723.1| Glutamate racemase [Streptosporangium roseum DSM 43021]
Length = 276
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 6/216 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q SI IFDSG+GGL V + + +P YVAD PYG ++ + + D L
Sbjct: 6 QASIGIFDSGVGGLTVARAIIDQLPNESIFYVADTARQPYGPKSIAQVRAYALEVM-DHL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACN+A + + R + PA ++A T++G + ++ T AT+
Sbjct: 65 VEHDVKMLVIACNSASAAVLRDARERYDVPVVEVIQPAARRAVQATRNGRVGVIGTRATI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ ++ + + L + A R+ E+ + +E+ + I G
Sbjct: 125 ESMAYHD---AFAAAPDVMLTG--VAAPRLVEFVERGETMSEELIEVIRGYMGPVLRDGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYPL+ ++ V + ++D A+
Sbjct: 180 DTLILGCTHYPLLTAPISYVAGDGVTLVSSADETAK 215
>gi|256847951|ref|ZP_05553395.1| glutamate racemase [Lactobacillus coleohominis 101-4-CHN]
gi|256715011|gb|EEU29988.1| glutamate racemase [Lactobacillus coleohominis 101-4-CHN]
Length = 267
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 16/233 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V++ +R +P ++V D FPYG +
Sbjct: 1 MDNRP--------IGVMDSGLGGLSVIRIIREQLPNESIVFVGDQGHFPYGVRTQENV-C 51
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L L Y + +IACNTA L+ P + +G + P + A A +
Sbjct: 52 QLALNIGRYLMTYDIKMMIIACNTATAASLPTLQKELP-IPVIGVIKPGAEAALAQPKHA 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I + +T T++ IH + ++ + S VE G K E+ E
Sbjct: 111 RIGVTATEGTIKAGAYPKTIHELNPDVTVIPKAAQPMVSVVEHNEVGTP-KAQEVVNEQL 169
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
F + + DV+VL CTH+P + L P V +D + + A+ +L
Sbjct: 170 AIF---KKQPVDVLVLGCTHFPFLAKEISNLLPD-VKLVDPALETVKTAKQML 218
>gi|71902958|ref|YP_279761.1| glutamate racemase [Streptococcus pyogenes MGAS6180]
gi|123640458|sp|Q48V50|MURI_STRPM RecName: Full=Glutamate racemase
gi|71802053|gb|AAX71406.1| glutamate racemase [Streptococcus pyogenes MGAS6180]
Length = 264
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 28/252 (11%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + +
Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E+++ + LG V P A T G + ++ TP T
Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190
+ S + + I L++ + +V AC + I E I K+I +
Sbjct: 121 ---VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVG 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246
+ D +VL CTHYPL+ + + + V +D+ R LL N HQ V
Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232
Query: 247 DHALFLSGKPDI 258
H F + P+I
Sbjct: 233 KHRFFTTANPEI 244
>gi|7387915|sp|P56868|MURI_AQUPY RecName: Full=Glutamate racemase
gi|6707573|gb|AAF25672.1|AF212972_1 glutamate racemase [Aquifex pyrophilus]
Length = 254
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 9/212 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R + +Y+ D PYG + + + + DK
Sbjct: 3 IGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ V+ACNTA + L+ F P +K+A +++ I ++ TPAT++
Sbjct: 63 VDII-VVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + + EE + E EI +++ ++++ + D +
Sbjct: 122 AYQRKLEE--GGADVFAKACPLFVPLAEE-----GLLEGEITRKVVEHYLKEFKGKIDTL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+L CTHYPL+ ++ V+ +D+S++++
Sbjct: 175 ILGCTHYPLLKKEIKKFL-GDVEVVDSSEALS 205
>gi|330996365|ref|ZP_08320248.1| glutamate racemase [Paraprevotella xylaniphila YIT 11841]
gi|329573223|gb|EGG54837.1| glutamate racemase [Paraprevotella xylaniphila YIT 11841]
Length = 281
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 28/237 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L ++R LMP+Y ++Y+ D+ PYG + + + D
Sbjct: 12 IGVFDSGYGGLTILHEIRQLMPQYDYLYLGDNARTPYGTRSFEVVYEFTREAVQKLFD-L 70
Query: 76 QPVLSVIACNTA------------FTLIKDELRSTF----PSMAFLGAVPAIKQAAAYTQ 119
L ++ACNTA ++ E R P+ +G + +
Sbjct: 71 GCHLVILACNTASAKALKTIQQNDLPKMEGETRRVLGVIRPTAECIGQITHSRHVGILAT 130
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SG IS S P +R+ Y + + LV + S +Y ++K
Sbjct: 131 SGTISSGSYPLEIRKLYPDIAVSGEACPMWVPLVENYEYDSPGADYF---------VEKR 181
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
I G + K+ D I+L CTHYPL+++ + +P V + + +A + L R
Sbjct: 182 I-GNLLRKD-PAIDTIILGCTHYPLLLNKILKYTPRNVRIVPQGEYVAYSLKDYLQR 236
>gi|255321691|ref|ZP_05362846.1| glutamate racemase [Campylobacter showae RM3277]
gi|255301171|gb|EET80433.1| glutamate racemase [Campylobacter showae RM3277]
Length = 327
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK-- 62
N +K L+ I FDSGIGGL VL + F+Y AD+ PYG + +
Sbjct: 8 NLTLDKDLK--IAFFDSGIGGLSVLAEALRRFSGAEFLYFADEDHVPYGTKSRAEIVRLS 65
Query: 63 --RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ FL S D V+ACNTA + ELR F S+ +G PA+K AA +
Sbjct: 66 LDAVGFLVSRGADGV-----VVACNTATSAAISELRGAF-SVPVIGMEPAVKLAADSFGA 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+++TP T+ + L+ +C S+ L R+ E+A ++ ++ +
Sbjct: 120 RPTLLIATPLTIAGEKLARLVGRL--ECETW---SLPL-PRLVEFAQDLEFDSPAVRAYL 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ E +R +VL CTH+ V R++ P V +D D R
Sbjct: 174 REELAKFELERLGSLVLGCTHFNYFKDVLREILPSHVRIIDGIDGTLNR 222
>gi|288800322|ref|ZP_06405780.1| glutamate racemase [Prevotella sp. oral taxon 299 str. F0039]
gi|288332535|gb|EFC71015.1| glutamate racemase [Prevotella sp. oral taxon 299 str. F0039]
Length = 281
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 22/242 (9%)
Query: 10 KKLQNSIL----IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----K 61
K QN+I +FDSG GGL +L+ R +P+Y++IY+ D+ PYG+ + +
Sbjct: 2 KNEQNNIAGPIGVFDSGYGGLTILEAFRKELPQYNYIYLGDNARAPYGSRSFDVVYEFTR 61
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFT-LIKDELRSTFPSM-----AFLGAV-PAIKQA 114
+ +M LF + L ++ CNTA ++ R P M LG + P ++
Sbjct: 62 QAVMKLF-----ELGCRLIILGCNTASAKALRTIQRHDLPQMDNSLRRVLGIIHPTVEVI 116
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
T + + IL+T T++ + I+ + VS + +E + +
Sbjct: 117 GDLTHTNHVGILATEGTIKSNSYALEINKLHPDITVTGVSCPLWVPIIENNEADGEGADY 176
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+KK I+ I + D ++L CTHYPL++ ++ +P V + +A+ L
Sbjct: 177 FVKKRID--TIMSLDSQIDTLILGCTHYPLLLPKIKKYTPKGVQVVAQGQYVAKSLANYL 234
Query: 235 PR 236
R
Sbjct: 235 QR 236
>gi|168334522|ref|ZP_02692683.1| glutamate racemase [Epulopiscium sp. 'N.t. morphotype B']
Length = 267
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I IFDSG+GGL V++++ + +Y D PYGN + K
Sbjct: 1 MDNRP--------IGIFDSGLGGLTVVKEVMKQLTNESIVYFGDTARVPYGNKSKSTVTK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ +L K + +IACNT + ELR FP + G V P + A+ T++G
Sbjct: 53 FSAQIIRFLLSKDVKAI-IIACNTVNSNCAIELRELFPELMIEGVVGPGVIMASRATKNG 111
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ T T++ + + + I + + VE+ ++ + I +
Sbjct: 112 RIGVIGTEGTVKSGRYAERLREIHPEYQIFSKACPLFVPLVEDGWTNTEVAKMVIATYLN 171
Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205
E D ++L CTHYP++
Sbjct: 172 ELLEED----IDTLILGCTHYPIL 191
>gi|304439446|ref|ZP_07399355.1| glutamate racemase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372042|gb|EFM25639.1| glutamate racemase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 267
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 12/234 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ VL+++ ++P+ +IY D PYG ++ F + +D+
Sbjct: 4 IGIFDSGVGGVSVLKELLKVLPDEEYIYYCDQKNLPYGEKTPGEIRNLTKTSF-NFIDRQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA + L++ F F I + T++ I I++T +T+
Sbjct: 63 NVDMVVIACNTATANAERYLKAIFGFPIFGIIRSGISEIVKATKNNKILIIATESTVENG 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDV 194
I S V + L VE+ +DE+ ++ ++E+ D
Sbjct: 123 IYQEKIKSLVPNADVRAKGCSNLVRAVEDGHI-----DDELAVQVVKEYLEEYRDFEFDT 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDD 247
+VL CTH+PL ++ ++ +D +I A+ L ++ Q R F++
Sbjct: 178 LVLGCTHFPLARPAIEKV----LEEMDKEVTIVDPAKSLAETVSEFLQDRDFEN 227
>gi|21909798|ref|NP_664066.1| glutamate racemase [Streptococcus pyogenes MGAS315]
gi|28896509|ref|NP_802859.1| glutamate racemase [Streptococcus pyogenes SSI-1]
gi|25453114|sp|Q8K8I8|MURI_STRP3 RecName: Full=Glutamate racemase
gi|21903983|gb|AAM78869.1| putative glutamate racemase [Streptococcus pyogenes MGAS315]
gi|28811763|dbj|BAC64692.1| putative glutamate racemase [Streptococcus pyogenes SSI-1]
Length = 264
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 28/252 (11%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + +
Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E+++ + LG V P A T G + ++ TP T
Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190
+ S + + I L++ + +V AC + I E I K+I +
Sbjct: 121 ---VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVG 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246
+ D +VL CTHYPL+ + + + V +D+ R LL N HQ V
Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232
Query: 247 DHALFLSGKPDI 258
H F + P+I
Sbjct: 233 KHRFFTTANPEI 244
>gi|311069331|ref|YP_003974254.1| glutamate racemase [Bacillus atrophaeus 1942]
gi|310869848|gb|ADP33323.1| glutamate racemase [Bacillus atrophaeus 1942]
Length = 271
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 6/224 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L +
Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIIRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTRELTQYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D ++ + +G + P + A T++ I ++ T
Sbjct: 61 LNSHHIKMLVIACNTATAIALDAIKREV-DIPVVGVIQPGARTAIKVTKNQTIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + ++ + ++ +L VE + DEI +E +
Sbjct: 120 TIKSGAYEEALVALNTELKVENLACPLLVPFVESGKF-LDKTADEI---VETSLHPLKNT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYP++ ++ V + + D AR +L
Sbjct: 176 TIDTLILGCTHYPILKDAIQRYMGEHVKIISSGDETAREVSTIL 219
>gi|254231591|ref|ZP_04924918.1| glutamate racemase murI [Mycobacterium tuberculosis C]
gi|124600650|gb|EAY59660.1| glutamate racemase murI [Mycobacterium tuberculosis C]
Length = 236
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 101/221 (45%), Gaps = 6/221 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ +
Sbjct: 10 VFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVGRGVK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACN+A + + R + +PA+++A A T++G I ++ T R T T
Sbjct: 70 AL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGT----RATIT 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
S+ + ++++ V+ G+ ++ +G + D +VL
Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVERGVTSGR-QVLGLAQGYLEPLQRAEVDTLVL 183
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
CTHYPL+ + + V + +++ A+ +L I+
Sbjct: 184 GCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEID 224
>gi|22537740|ref|NP_688591.1| glutamate racemase [Streptococcus agalactiae 2603V/R]
gi|76787427|ref|YP_330218.1| glutamate racemase [Streptococcus agalactiae A909]
gi|76799029|ref|ZP_00781224.1| glutamate racemase [Streptococcus agalactiae 18RS21]
gi|77408489|ref|ZP_00785227.1| glutamate racemase [Streptococcus agalactiae COH1]
gi|29839527|sp|Q8DY92|MURI_STRA5 RecName: Full=Glutamate racemase
gi|123601417|sp|Q3JZT5|MURI_STRA1 RecName: Full=Glutamate racemase
gi|22534630|gb|AAN00464.1|AE014264_19 glutamate racemase [Streptococcus agalactiae 2603V/R]
gi|76562484|gb|ABA45068.1| glutamate racemase [Streptococcus agalactiae A909]
gi|76585615|gb|EAO62178.1| glutamate racemase [Streptococcus agalactiae 18RS21]
gi|77172931|gb|EAO76062.1| glutamate racemase [Streptococcus agalactiae COH1]
Length = 264
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 14/254 (5%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++M +PE I++ D PYG +++ + + +L K +
Sbjct: 9 LDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLTKNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA + E++ + LG + P A T G + I+ TP T++
Sbjct: 69 I-VIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNLGKVGIIGTPMTVKSDAY 126
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
I + + ++ VE ++ KK + GK D ++L
Sbjct: 127 RQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKVVYETLSPLVGK-LDTLIL 181
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHALFLSGK 255
CTHYPL+ + + + V +D+ R LL IN + H + +
Sbjct: 182 GCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHFYTTAS 241
Query: 256 P----DIAMRRLMQ 265
P +IA + L Q
Sbjct: 242 PKGFKEIAEQWLSQ 255
>gi|323126640|gb|ADX23937.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
Length = 264
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 10/243 (4%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V++++ +P +Y+ D PYG +++ L +L K +
Sbjct: 9 LDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIREYTWDLVRFLLTKNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E++ + LG + P A T G + ++ TP T+
Sbjct: 69 I-VFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIY 126
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
I + ++ VE +I+ KK + GK D +VL
Sbjct: 127 RQKIQLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVL 181
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHALFLSGK 255
CTHYPL+ + + + V +D+ R LL IN + + H + +
Sbjct: 182 GCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINGSRCQEKVKHHFYTTAS 241
Query: 256 PDI 258
P+I
Sbjct: 242 PEI 244
>gi|16330377|ref|NP_441105.1| glutamate racemase [Synechocystis sp. PCC 6803]
gi|2492985|sp|P73737|MURI_SYNY3 RecName: Full=Glutamate racemase
gi|1652867|dbj|BAA17785.1| glutamate racemase [Synechocystis sp. PCC 6803]
Length = 279
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 11/221 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I +FDSG+GGL VL+++ +P+ +Y D PYG + + + + + +
Sbjct: 6 RSRIGVFDSGVGGLTVLRELYRQLPKESILYFGDTARLPYGKRSPQVILQYVREILT-WM 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + ++ACNT+ L + ++ F +M LG + P + AA Q I ++STPAT
Sbjct: 65 AAEEVKMVIMACNTSSALALETVQQEF-NMPILGVILPGAR--AAVRQGRRIGVISTPAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190
+ IH + ++ +E+ D E+ +++
Sbjct: 122 AASNAYRHAIHEITPDALVWQMACPEFVPLIEQNRL-----HDPYTLEVAKGYLQPLLDA 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
D +V CTHY + VF+Q+ P + +D + + + AR
Sbjct: 177 DIDTLVFGCTHYRHLTPVFQQILPSHIRLVDPASHVVKAAR 217
>gi|332522432|ref|ZP_08398684.1| glutamate racemase [Streptococcus porcinus str. Jelinkova 176]
gi|332313696|gb|EGJ26681.1| glutamate racemase [Streptococcus porcinus str. Jelinkova 176]
Length = 264
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 26/250 (10%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V++++ +P + +Y+ D PYG +K+ L + ++ K +
Sbjct: 9 LDSGVGGLTVVRELMRQLPYENIVYIGDSARAPYGPRPAEQIKEYTWELVNFLMTKNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E++ + LG + P A T +G + ++ TP T+
Sbjct: 69 I-VFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTNGRVGVIGTPMTV----- 121
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCFIEKEG 189
+S + + + A V AC +I+ KK + G
Sbjct: 122 -------ISDIYRQKIQLLAPAVEVTSLACPKFVPIVESNEIQSSVAKKVVYETLAPLVG 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDD 247
K D +VL CTHYPL+ + + + V +D+ R LL IN+ + +
Sbjct: 175 K-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINSGRYQEKVR 233
Query: 248 HALFLSGKPD 257
H + + P+
Sbjct: 234 HYFYTTASPE 243
>gi|33240493|ref|NP_875435.1| glutamate racemase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238021|gb|AAQ00088.1| Glutamate racemase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 267
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 18/226 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSGIGG VL+ ++ + IY+AD P+G + +++ + S L +
Sbjct: 7 IFDSGIGGFTVLKSIQERHSSFRSIYLADTQRVPFGTKQPSEIRQ-IALEISKWLCRQNI 65
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RRTY 136
V+ACNT ++ D +++ F I + I IL+TP+T+ + Y
Sbjct: 66 NAVVVACNTTNSVALDVVKNNVEVPVF----DLIGSTSELIHESRIGILATPSTVASKAY 121
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIEKEGKRTD 193
+ ++ S S +L E+ I +I E++ I + +
Sbjct: 122 SKEILSSKPF--------SFVLEEGCPEFVPMIERGQINSSEVRGAIVNHLEPLIKENVE 173
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRIN 238
IVL C+H+PL+ +F++L P + +D S ++A++ L+ P +N
Sbjct: 174 AIVLGCSHFPLLKPIFKELMPSNIRLIDPSLNLAKKLDTLITPSVN 219
>gi|239917359|ref|YP_002956917.1| glutamate racemase [Micrococcus luteus NCTC 2665]
gi|281414158|ref|ZP_06245900.1| glutamate racemase [Micrococcus luteus NCTC 2665]
gi|239838566|gb|ACS30363.1| glutamate racemase [Micrococcus luteus NCTC 2665]
Length = 310
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P +YV D PYG ++ + + +++ +
Sbjct: 14 IGVFDSGVGGLTVARAIMDQLPHESILYVGDTEHSPYGPRPIAEVRALALAIMDELVARG 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
L VIACN+A + + R + + + PA+++A A T++G I ++ T AT
Sbjct: 74 VKAL-VIACNSASAAVLRDARERYTGGHGIPVIEVIQPAVRRAVAATRTGRIGVIGTEAT 132
Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKE 188
+ R Y S+ + H+ ++S+ VE GI + E +E
Sbjct: 133 VGSRAYED----SFSAAPHL-AITSVACPRFVEFVEAGITTGPELLETAREYTAPL---R 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYPL+ + V + +++ A+
Sbjct: 185 AAGVDTLVLGCTHYPLLTGALSLVMGEDVTLVSSAEETAK 224
>gi|322411173|gb|EFY02081.1| glutamate racemase [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
Length = 264
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 10/243 (4%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V++++ +P +Y+ D PYG +++ L +L K +
Sbjct: 9 LDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIREYTWDLVRFLLTKNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E++ + LG + P A T G + ++ TP T+
Sbjct: 69 I-VFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIY 126
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
I + ++ VE +I+ KK + GK D +VL
Sbjct: 127 RQKIQLLAPTVEVTSLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVL 181
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHALFLSGK 255
CTHYPL+ + + + V +D+ R LL IN + + H + +
Sbjct: 182 GCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINGSRCQEKVKHHFYTTAS 241
Query: 256 PDI 258
P+I
Sbjct: 242 PEI 244
>gi|256375157|ref|YP_003098817.1| glutamate racemase [Actinosynnema mirum DSM 43827]
gi|255919460|gb|ACU34971.1| glutamate racemase [Actinosynnema mirum DSM 43827]
Length = 264
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 19/243 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P YV D PYG ++K + L ++
Sbjct: 8 IGIFDSGVGGLTVARAIMDQLPAERIRYVGDTANGPYGPLPIAQVRKHALDLADKLVADG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+L VIACNTA + R + +PA+++A A T+SG + ++ T +T+
Sbjct: 68 VKML-VIACNTASAACLRDARERYDVPVVEVVLPAVRRAVATTRSGRVGVIGTQSTI--- 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDV 194
TS + V+++ V+ G + I ++E + D
Sbjct: 124 -TSGAYQDTFAAARDVQVTAVACPRFVDFVERGTTSGRQVLG--IAQAYLEPLQRADVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ V + + V + +++ + RV + F G
Sbjct: 181 LVLGCTHYPLLTGVVQLVMGDGVTLVSSAEETVKDV-----------VRVLTERDQFREG 229
Query: 255 KPD 257
+PD
Sbjct: 230 EPD 232
>gi|257884711|ref|ZP_05664364.1| glutamate racemase [Enterococcus faecium 1,231,501]
gi|257820549|gb|EEV47697.1| glutamate racemase [Enterococcus faecium 1,231,501]
Length = 277
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 19/238 (7%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
DN P I DSG+GGL V+++ +P + ++V D PYG + +
Sbjct: 10 DNRP--------IGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQY 61
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122
+ ++D+ +L VIACNTA + +E+++ S+ +G + P + A TQ+
Sbjct: 62 TWEMTDYLVDQGIKML-VIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQ 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEI 180
+ I+ T T++ + V + + ++ S VE EY + KK +
Sbjct: 120 VGIIGTIGTVKSRAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIV 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
K+ D ++L CTHYPL+ + + + V +D+ LL N
Sbjct: 174 AETLAPLTTKKIDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFN 231
>gi|167764308|ref|ZP_02436435.1| hypothetical protein BACSTE_02693 [Bacteroides stercoris ATCC
43183]
gi|167698424|gb|EDS15003.1| hypothetical protein BACSTE_02693 [Bacteroides stercoris ATCC
43183]
Length = 279
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 9/227 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 12 IGVFDSGYGGLTILSKIREALPEYDYIYLGDNARAPYGTRSFEVVYEFTLQAVTKLFE-M 70
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ ++L P+ LG + P ++ T+S + +L+T
Sbjct: 71 GCHLVILACNTASAKALRSIQINDLPHLDPARRVLGVIRPTVECIGNITRSRHVGVLATG 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ IH + + + S VE + ++K I +
Sbjct: 131 GTIKSESYPLEIHKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFVRKYINELLAKD-- 188
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D +L CTHYP+++ R+ P + + +A + L R
Sbjct: 189 REIDTAILGCTHYPILLPKIRKYMPESITIVSQGKLVADSLKDYLHR 235
>gi|251781827|ref|YP_002996129.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242390456|dbj|BAH80915.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
Length = 265
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 10/243 (4%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V++++ +P +Y+ D PYG +++ L +L K +
Sbjct: 10 LDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIREYTWDLVRFLLTKNVKM 69
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E++ + LG + P A T G + ++ TP T+
Sbjct: 70 I-VFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIY 127
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
I + ++ VE +I+ KK + GK D +VL
Sbjct: 128 RQKIQLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVL 182
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFLSGK 255
CTHYPL+ + + + V +D+ R LL + +R + H + +
Sbjct: 183 GCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINGSRCQEKVKHHFYTTAS 242
Query: 256 PDI 258
P+I
Sbjct: 243 PEI 245
>gi|160872350|ref|ZP_02062482.1| glutamate racemase [Rickettsiella grylli]
gi|159121149|gb|EDP46487.1| glutamate racemase [Rickettsiella grylli]
Length = 271
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 11/223 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + L+P IY D P+G+ A++ + + D+L K
Sbjct: 8 IGIFDSGMGGLTVAHAVTKLLPNESIIYFGDTAHAPWGDKSAAAIQAYSIKI-CDMLIKQ 66
Query: 76 QPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +IACN+ A+ L+K+ L M P I A Y I ++ T T
Sbjct: 67 NCKLILIACNSASAVAYELVKEYL--GHKRMVVDVIDPMIDHLARYYVDKTIGLIGTKQT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + ++ +++ +L +EE I D IK ++ E +
Sbjct: 125 INSNIYKKKLDELGINIQLNTLATPLLVPLIEEGFMDQTIMSDAIKTYLK----ESSLRN 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D +VL CTHYPLI ++ +D++D +A + L
Sbjct: 181 LDALVLGCTHYPLIKQQIKRFYGDSTTIVDSTDIVAEAVKSRL 223
>gi|323342863|ref|ZP_08083095.1| glutamate racemase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463975|gb|EFY09169.1| glutamate racemase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 252
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWED--------HALKKRLMFLFS 69
IFDSG+GG V Q ++ + + AD PYGN D HA+K F
Sbjct: 12 IFDSGLGGYSVYQYLKQHLDPVSLVLYADQKNAPYGNQSDDAIIAYTLHAMK---WFQDH 68
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
DI D VIACNT + R+ FP M +G + + I+ST
Sbjct: 69 DIRD------VVIACNTVSAVALSTARNHFPDMNLIGIIELTVGQIEPNADTCVGIVSTL 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK---EDEIKKEIEGCFIE 186
AT N IH H+ ++ L + +E +K+ E+E+K +E
Sbjct: 123 ATFNAHAYRNFIHEK-GPIHVKELALPELVNIIEGLNQNLKLDTYLENELKPILES---- 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQL 212
TD+I L CTHYPL+ FR++
Sbjct: 178 -----TDLI-LGCTHYPLVHDAFRKI 197
>gi|227494818|ref|ZP_03925134.1| glutamate racemase [Actinomyces coleocanis DSM 15436]
gi|226831270|gb|EEH63653.1| glutamate racemase [Actinomyces coleocanis DSM 15436]
Length = 272
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 16/236 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ +YV D PYG +++ + + ++ +
Sbjct: 6 IGIFDSGLGGLTVARSIMDKLPQEQILYVGDTAHTPYGTKPIATVRELALNVMDELASRG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L VIACNTA + + R + A + V PA K A A T++ I +++T AT
Sbjct: 66 VKML-VIACNTASAAVLRDARERYEVDAGIPVVEVIQPASKAAVAATRNRKIGVIATAAT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEK-E 188
+ TS + V+ VE GI + E+ +E +++ +
Sbjct: 125 V----TSGAYKDAFAVVPDLEVTQQACPRFVEFVEKGITTGAELNEVARE----YLDPVK 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
D +VL CTHYPL+ + Q V + +S+S A L R N + V
Sbjct: 177 TAGVDTLVLGCTHYPLLTGLISQHMGERVTLISSSESAANEVYQRLVRENLTASEV 232
>gi|15608478|ref|NP_215854.1| glutamate racemase [Mycobacterium tuberculosis H37Rv]
gi|15840793|ref|NP_335830.1| glutamate racemase [Mycobacterium tuberculosis CDC1551]
gi|31792534|ref|NP_855027.1| glutamate racemase [Mycobacterium bovis AF2122/97]
gi|148661127|ref|YP_001282650.1| glutamate racemase [Mycobacterium tuberculosis H37Ra]
gi|148822559|ref|YP_001287313.1| glutamate racemase [Mycobacterium tuberculosis F11]
gi|167969085|ref|ZP_02551362.1| glutamate racemase [Mycobacterium tuberculosis H37Ra]
gi|215403185|ref|ZP_03415366.1| glutamate racemase [Mycobacterium tuberculosis 02_1987]
gi|215410983|ref|ZP_03419791.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A]
gi|215426667|ref|ZP_03424586.1| glutamate racemase [Mycobacterium tuberculosis T92]
gi|215430224|ref|ZP_03428143.1| glutamate racemase [Mycobacterium tuberculosis EAS054]
gi|215445520|ref|ZP_03432272.1| glutamate racemase [Mycobacterium tuberculosis T85]
gi|218753049|ref|ZP_03531845.1| glutamate racemase [Mycobacterium tuberculosis GM 1503]
gi|219557241|ref|ZP_03536317.1| glutamate racemase [Mycobacterium tuberculosis T17]
gi|253799614|ref|YP_003032615.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 1435]
gi|254364235|ref|ZP_04980281.1| glutamate racemase murI [Mycobacterium tuberculosis str. Haarlem]
gi|254550350|ref|ZP_05140797.1| glutamate racemase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260186277|ref|ZP_05763751.1| glutamate racemase [Mycobacterium tuberculosis CPHL_A]
gi|260200395|ref|ZP_05767886.1| glutamate racemase [Mycobacterium tuberculosis T46]
gi|260204599|ref|ZP_05772090.1| glutamate racemase [Mycobacterium tuberculosis K85]
gi|289442780|ref|ZP_06432524.1| glutamate racemase [Mycobacterium tuberculosis T46]
gi|289446933|ref|ZP_06436677.1| glutamate racemase MurI [Mycobacterium tuberculosis CPHL_A]
gi|289554870|ref|ZP_06444080.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 605]
gi|289569351|ref|ZP_06449578.1| glutamate racemase MurI [Mycobacterium tuberculosis T17]
gi|289574004|ref|ZP_06454231.1| glutamate racemase MurI [Mycobacterium tuberculosis K85]
gi|289745090|ref|ZP_06504468.1| glutamate racemase MurI [Mycobacterium tuberculosis 02_1987]
gi|289749894|ref|ZP_06509272.1| glutamate racemase MurI [Mycobacterium tuberculosis T92]
gi|289753420|ref|ZP_06512798.1| glutamate racemase MurI [Mycobacterium tuberculosis EAS054]
gi|289757443|ref|ZP_06516821.1| glutamate racemase [Mycobacterium tuberculosis T85]
gi|289761499|ref|ZP_06520877.1| glutamate racemase MurI [Mycobacterium tuberculosis GM 1503]
gi|294994896|ref|ZP_06800587.1| glutamate racemase [Mycobacterium tuberculosis 210]
gi|297633891|ref|ZP_06951671.1| glutamate racemase [Mycobacterium tuberculosis KZN 4207]
gi|297730879|ref|ZP_06959997.1| glutamate racemase [Mycobacterium tuberculosis KZN R506]
gi|298524845|ref|ZP_07012254.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A]
gi|306775517|ref|ZP_07413854.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu001]
gi|306780667|ref|ZP_07419004.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu002]
gi|306784068|ref|ZP_07422390.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu003]
gi|306788429|ref|ZP_07426751.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu004]
gi|306792758|ref|ZP_07431060.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu005]
gi|306797162|ref|ZP_07435464.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu006]
gi|306803041|ref|ZP_07439709.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu008]
gi|306807235|ref|ZP_07443903.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu007]
gi|306967432|ref|ZP_07480093.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu009]
gi|306971625|ref|ZP_07484286.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu010]
gi|307079337|ref|ZP_07488507.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu011]
gi|307083902|ref|ZP_07493015.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu012]
gi|313658212|ref|ZP_07815092.1| glutamate racemase [Mycobacterium tuberculosis KZN V2475]
gi|54037866|sp|P63636|MURI_MYCBO RecName: Full=Glutamate racemase
gi|54041259|sp|P63635|MURI_MYCTU RecName: Full=Glutamate racemase
gi|166231043|sp|A5U238|MURI_MYCTA RecName: Full=Glutamate racemase
gi|1340104|emb|CAA98102.1| PROBABLE GLUTAMATE RACEMASE MURI [Mycobacterium tuberculosis H37Rv]
gi|13880988|gb|AAK45644.1| glutamate racemase [Mycobacterium tuberculosis CDC1551]
gi|31618123|emb|CAD94234.1| PROBABLE GLUTAMATE RACEMASE MURI [Mycobacterium bovis AF2122/97]
gi|134149749|gb|EBA41794.1| glutamate racemase murI [Mycobacterium tuberculosis str. Haarlem]
gi|148505279|gb|ABQ73088.1| glutamate racemase [Mycobacterium tuberculosis H37Ra]
gi|148721086|gb|ABR05711.1| glutamate racemase murI [Mycobacterium tuberculosis F11]
gi|253321117|gb|ACT25720.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 1435]
gi|289415699|gb|EFD12939.1| glutamate racemase [Mycobacterium tuberculosis T46]
gi|289419891|gb|EFD17092.1| glutamate racemase MurI [Mycobacterium tuberculosis CPHL_A]
gi|289439502|gb|EFD21995.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 605]
gi|289538435|gb|EFD43013.1| glutamate racemase MurI [Mycobacterium tuberculosis K85]
gi|289543105|gb|EFD46753.1| glutamate racemase MurI [Mycobacterium tuberculosis T17]
gi|289685618|gb|EFD53106.1| glutamate racemase MurI [Mycobacterium tuberculosis 02_1987]
gi|289690481|gb|EFD57910.1| glutamate racemase MurI [Mycobacterium tuberculosis T92]
gi|289694007|gb|EFD61436.1| glutamate racemase MurI [Mycobacterium tuberculosis EAS054]
gi|289709005|gb|EFD73021.1| glutamate racemase MurI [Mycobacterium tuberculosis GM 1503]
gi|289713007|gb|EFD77019.1| glutamate racemase [Mycobacterium tuberculosis T85]
gi|298494639|gb|EFI29933.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A]
gi|308215989|gb|EFO75388.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu001]
gi|308326496|gb|EFP15347.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu002]
gi|308331137|gb|EFP19988.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu003]
gi|308334978|gb|EFP23829.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu004]
gi|308338784|gb|EFP27635.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu005]
gi|308342425|gb|EFP31276.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu006]
gi|308346336|gb|EFP35187.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu007]
gi|308350259|gb|EFP39110.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu008]
gi|308354908|gb|EFP43759.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu009]
gi|308358852|gb|EFP47703.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu010]
gi|308362789|gb|EFP51640.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu011]
gi|308366436|gb|EFP55287.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu012]
gi|323720155|gb|EGB29258.1| glutamate racemase murI [Mycobacterium tuberculosis CDC1551A]
gi|326902961|gb|EGE49894.1| glutamate racemase murI [Mycobacterium tuberculosis W-148]
gi|328459360|gb|AEB04783.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 4207]
Length = 271
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 13/236 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ +
Sbjct: 10 VFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVGRGVK 69
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACN+A + + R + +PA+++A A T++G I ++ T R T T
Sbjct: 70 AL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGT----RATIT 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
S+ + ++++ V+ G+ ++ +G + D +VL
Sbjct: 125 SHAYQDAFAAARDTEITAVACPRFVDFVERGVT-SGRQVLGLAQGYLEPLQRAEVDTLVL 183
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-------THQTRVFD 246
CTHYPL+ + + V + +++ A+ +L I+ TR+F+
Sbjct: 184 GCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFE 239
>gi|293554039|ref|ZP_06674639.1| glutamate racemase [Enterococcus faecium E1039]
gi|291601821|gb|EFF32073.1| glutamate racemase [Enterococcus faecium E1039]
Length = 277
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 11/223 (4%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++ +P + ++V D PYG + + + ++D+ +
Sbjct: 17 IDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLVDQGIKM 76
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T++
Sbjct: 77 L-VIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSRAY 134
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ V + + ++ S VE EY + KK + K+ D +
Sbjct: 135 EKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIVAETLAPLTTKKIDTL 188
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+L CTHYPL+ + + + V +D+ LL N
Sbjct: 189 ILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFN 231
>gi|333029733|ref|ZP_08457794.1| Glutamate racemase [Bacteroides coprosuis DSM 18011]
gi|332740330|gb|EGJ70812.1| Glutamate racemase [Bacteroides coprosuis DSM 18011]
Length = 279
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 9/232 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I +FDSG GGL +L+K+R +PEY +IY+ D+ PYG + K +
Sbjct: 6 KRPGPIGVFDSGYGGLTILEKIRKKLPEYDYIYLGDNARAPYGTRSFELVYKFTLQAVKH 65
Query: 71 ILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124
+ ++ L ++ACNTA ++ +++L P LG + P ++ T S I
Sbjct: 66 LFEE-GCHLVILACNTASAKALRSIQQNDLPLLDPQRRVLGVIRPTVESINELTISNHIG 124
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+++T T++ + + + + VE + +K+ I+
Sbjct: 125 VVATLGTIKSESYPLELAKLFPHIKVSGEACPMWVPLVENNEFDTPGADYFVKQSIDNLL 184
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ D I+L CTHYPL+ Q P + + +A+ + L R
Sbjct: 185 --QQDSDIDTILLGCTHYPLLQSKIEQFVPNNIKVIAQGQYVAKSLQNYLER 234
>gi|69246346|ref|ZP_00603902.1| Glutamate racemase [Enterococcus faecium DO]
gi|257878166|ref|ZP_05657819.1| glutamate racemase [Enterococcus faecium 1,230,933]
gi|257881050|ref|ZP_05660703.1| glutamate racemase [Enterococcus faecium 1,231,502]
gi|257889635|ref|ZP_05669288.1| glutamate racemase [Enterococcus faecium 1,231,410]
gi|257892425|ref|ZP_05672078.1| glutamate racemase [Enterococcus faecium 1,231,408]
gi|258616328|ref|ZP_05714098.1| glutamate racemase [Enterococcus faecium DO]
gi|289565821|ref|ZP_06446263.1| glutamate racemase [Enterococcus faecium D344SRF]
gi|293563127|ref|ZP_06677592.1| glutamate racemase [Enterococcus faecium E1162]
gi|293569788|ref|ZP_06680875.1| glutamate racemase [Enterococcus faecium E1071]
gi|294614005|ref|ZP_06693935.1| glutamate racemase [Enterococcus faecium E1636]
gi|294617100|ref|ZP_06696766.1| glutamate racemase [Enterococcus faecium E1679]
gi|294623311|ref|ZP_06702173.1| glutamate racemase [Enterococcus faecium U0317]
gi|68195299|gb|EAN09750.1| Glutamate racemase [Enterococcus faecium DO]
gi|257812394|gb|EEV41152.1| glutamate racemase [Enterococcus faecium 1,230,933]
gi|257816708|gb|EEV44036.1| glutamate racemase [Enterococcus faecium 1,231,502]
gi|257825995|gb|EEV52621.1| glutamate racemase [Enterococcus faecium 1,231,410]
gi|257828804|gb|EEV55411.1| glutamate racemase [Enterococcus faecium 1,231,408]
gi|289162364|gb|EFD10222.1| glutamate racemase [Enterococcus faecium D344SRF]
gi|291587536|gb|EFF19413.1| glutamate racemase [Enterococcus faecium E1071]
gi|291593112|gb|EFF24691.1| glutamate racemase [Enterococcus faecium E1636]
gi|291596637|gb|EFF27864.1| glutamate racemase [Enterococcus faecium E1679]
gi|291597279|gb|EFF28468.1| glutamate racemase [Enterococcus faecium U0317]
gi|291604905|gb|EFF34374.1| glutamate racemase [Enterococcus faecium E1162]
Length = 277
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
DN P I DSG+GGL V+++ +P + ++V D PYG + +
Sbjct: 10 DNRP--------IGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQ 60
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122
+ +D L + + VIACNTA + +E+++ S+ +G + P + A TQ+
Sbjct: 61 YTWEMTDYLVEQGIKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQ 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEI 180
+ I+ T T++ + V + + ++ S VE EY + KK +
Sbjct: 120 VGIIGTIGTVKSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIV 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
K+ D ++L CTHYPL+ + + + V +D+ LL N
Sbjct: 174 AETLAPLTTKKIDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFN 231
>gi|269218711|ref|ZP_06162565.1| glutamate racemase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211822|gb|EEZ78162.1| glutamate racemase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 275
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 10/217 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + PE Y+ D PYG +++ + + ++D
Sbjct: 6 IGIFDSGVGGLTVARAIIDQFPEESITYIGDTAHTPYGPKPIAQVRELALDIMDSLVDSG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L VIACN+A + + R + + + V PA+++A + T++ I ++ T AT
Sbjct: 66 VKML-VIACNSASAAVLHDARERYQAARSIPVVEVIQPAVRRAVSATRNRRIGVIGTEAT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + ++ + H+ L ++ VE GI ++++ E
Sbjct: 125 IGSGAYED---AFAAAPHLTLTTAA-CPEFVELVEAGITAGP-QVEEVAERYLAPVRDAG 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYPL+ V + ++D AR
Sbjct: 180 VDTLVLGCTHYPLLAGAIGYTMGESVTLVSSADETAR 216
>gi|288801916|ref|ZP_06407358.1| glutamate racemase [Prevotella melaninogenica D18]
gi|288335958|gb|EFC74391.1| glutamate racemase [Prevotella melaninogenica D18]
Length = 279
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMF 66
K I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + ++ +M
Sbjct: 6 KQPGPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVMK 65
Query: 67 LFSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
LF + L ++ CNTA T+ +++L + P LG + P + T S
Sbjct: 66 LF-----ELGCQLVILGCNTASAKALRTIQQNDLPNLDPDRRVLGVIRPTAEVIGKLTHS 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L+T T++ + I + V + +E + +KK I
Sbjct: 121 RHVGVLATEGTIKSDSYNLEIQKLWGDVKVTGVPCPLWVPIIENNEADSPGADYFVKKRI 180
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIV 206
+ I + D ++L CTHYP+++
Sbjct: 181 D--HIMRLDPEIDTLILGCTHYPILM 204
>gi|325068394|ref|ZP_08127067.1| glutamate racemase [Actinomyces oris K20]
Length = 287
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 12/216 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P+ +Y+ D PYG + ++ + + +++D+
Sbjct: 1 MFDSGVGGLTVARSVLDQLPQEQVLYIGDTANSPYGPRDIAEVRSLALGIMDELVDRGVK 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPATL- 132
+L VIACNTA + + R + + + PA + AA T++G + +++T T+
Sbjct: 61 LL-VIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGTVD 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R Y L + + LVS R E A E+ E +
Sbjct: 120 SRAYDDAL----QAVPGVELVSQAC--PRFVELAERGVTTGPEVLDVAEEYLAPIKAAGV 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYPL+V + V + +SD A+
Sbjct: 174 DTLILGCTHYPLLVGPISYVMGRDVTLVTSSDETAK 209
>gi|257887546|ref|ZP_05667199.1| glutamate racemase [Enterococcus faecium 1,141,733]
gi|257896041|ref|ZP_05675694.1| glutamate racemase [Enterococcus faecium Com12]
gi|293378787|ref|ZP_06624944.1| glutamate racemase [Enterococcus faecium PC4.1]
gi|257823600|gb|EEV50532.1| glutamate racemase [Enterococcus faecium 1,141,733]
gi|257832606|gb|EEV59027.1| glutamate racemase [Enterococcus faecium Com12]
gi|292642580|gb|EFF60733.1| glutamate racemase [Enterococcus faecium PC4.1]
Length = 281
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
DN P I DSG+GGL V+++ +P + ++V D PYG + +
Sbjct: 10 DNRP--------IGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQ 60
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122
+ +D L + + VIACNTA + +E+++ S+ +G + P + A TQ+
Sbjct: 61 YTWEMTDYLVEQGIKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQ 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEI 180
+ I+ T T++ + V + + ++ S VE EY + KK +
Sbjct: 120 VGIIGTIGTVKSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIV 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
K+ D ++L CTHYPL+ + + + V +D+ LL N
Sbjct: 174 AETLAPLTTKKIDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFN 231
>gi|227551339|ref|ZP_03981388.1| glutamate racemase [Enterococcus faecium TX1330]
gi|227179550|gb|EEI60522.1| glutamate racemase [Enterococcus faecium TX1330]
Length = 277
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 11/223 (4%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++ +P + ++V D PYG + + + +D L +
Sbjct: 13 IDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQYTWEMTDYLVEQGIK 71
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T++
Sbjct: 72 MLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAY 130
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ V + + ++ S VE EY + KK + K+ D +
Sbjct: 131 EKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIVAETLAPLTTKKIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+L CTHYPL+ + + + V +D+ LL N
Sbjct: 185 ILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFN 227
>gi|113474067|ref|YP_720128.1| glutamate racemase [Trichodesmium erythraeum IMS101]
gi|122965316|sp|Q11A19|MURI_TRIEI RecName: Full=Glutamate racemase
gi|110165115|gb|ABG49655.1| glutamate racemase [Trichodesmium erythraeum IMS101]
Length = 270
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 27/268 (10%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI- 71
Q I IFDSGIGGL VL+++ +P+ +Y AD PYG ++ L F+ I
Sbjct: 7 QKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGT---RTTEEILQFVDEIIT 63
Query: 72 -LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFL--GAVPAIKQAAAYTQSGLISIL 126
L K + ++ACNT+ L ++++S F P + + GA A+KQ I ++
Sbjct: 64 WLVKSGVKMVLMACNTSSALALEKVKSKFDVPILGLIVPGANTAVKQGKR------IGVI 117
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC----GIKIKEDEIKKEIEG 182
+TPAT I + + V +E+ +I E+ + I+
Sbjct: 118 ATPATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHDPYTYQIAEEYLMPLIQ- 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
++ D +V CTHYP + + R L P V ++D + S+ + L +N
Sbjct: 177 -------QQIDTLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLEND 229
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ +S P +Q G K
Sbjct: 230 KTPKPTKFVVSSSPQKFADLSLQLLGYK 257
>gi|329766985|ref|ZP_08258513.1| glutamate racemase [Gemella haemolysans M341]
gi|328837710|gb|EGF87335.1| glutamate racemase [Gemella haemolysans M341]
Length = 264
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 25/253 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N+I +FDSG+GGL V +++ +P Y D PYG+ + K +
Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTREEIIKYTDRAVKYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+DK ++ V+ACNTA + L+ + + +G V P ++A T++ + +L T
Sbjct: 61 IDKGVKMV-VLACNTATAAALNYLQDKY-DIPIIGVVQPGARRAIQATENNKVLVLGTKF 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---------KIKEDEIKKEIE 181
T + S V I ++S I +V + AC + +D KK I
Sbjct: 119 TAK---------SKVYDIEIENINSDI---QVVDKACPAFVPFIESEGNVDKDATKKIIH 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
D +VL CTHYP++ + + + + AR +L HQ
Sbjct: 167 ETLENTRNLGVDTVVLGCTHYPILKKDIEEYYGNNIKVISSGREAAREVSSVLGYAKLHQ 226
Query: 242 TRVF-DDHALFLS 253
R DH ++S
Sbjct: 227 KRFNKKDHEFYIS 239
>gi|302346059|ref|YP_003814412.1| glutamate racemase [Prevotella melaninogenica ATCC 25845]
gi|302149137|gb|ADK95399.1| glutamate racemase [Prevotella melaninogenica ATCC 25845]
Length = 279
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMF 66
K I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + ++ +M
Sbjct: 6 KQPGPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVMK 65
Query: 67 LFSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
LF L ++ CNTA T+ +++L + P LG + P + T+S
Sbjct: 66 LFD-----LGCQLVILGCNTASAKALRTIQQNDLPNLDPDRRVLGVIRPTAEVIGKLTRS 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L+T T++ + I + V + +E + +KK I
Sbjct: 121 RHVGVLATEGTIKSDSYNLEIQKLWEDVKVTGVPCPLWVPIIENNEADSPGADYFVKKRI 180
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIV 206
+ I + D ++L CTHYP+++
Sbjct: 181 D--HIMRLDPEIDTLILGCTHYPILM 204
>gi|118470579|ref|YP_889158.1| glutamate racemase [Mycobacterium smegmatis str. MC2 155]
gi|166231042|sp|A0R1X0|MURI_MYCS2 RecName: Full=Glutamate racemase
gi|118171866|gb|ABK72762.1| glutamate racemase [Mycobacterium smegmatis str. MC2 155]
Length = 277
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ +
Sbjct: 8 IGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHSLAIGDDLVSRG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNTA + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 68 VKAL-VIACNTASSACLRDARERYSPVPVVEVILPAVRRAVAATRNGRIGVIGTQATI-- 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
S + V ++ V+ G+ ++ EG + D
Sbjct: 125 --ASGAYQDAFAAARDTEVFTVACPRFVDFVERGVTSGR-QVLGLAEGYLEPLQLAEVDT 181
Query: 195 IVLACTHYPLI 205
+VL CTHYP++
Sbjct: 182 LVLGCTHYPML 192
>gi|291541513|emb|CBL14623.1| glutamate racemase [Ruminococcus bromii L2-63]
Length = 272
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 36/262 (13%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q++I +FDSG+GGL +++ ++P IY D PYGN + K + ++ L
Sbjct: 4 QDAIGVFDSGLGGLSAVKEFLHVLPNEKIIYFGDTGRVPYGNRSRETISKYAL-QDANFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K+ V AC T ++ D L S+ + G V P A T++G I I+ T AT
Sbjct: 63 LKHNVKTVVAACGTVSSVAGDMLEEKL-SVPYTGVVNPTAFIADQKTKNGKIGIIGTAAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC---------GIKIKEDEIKKEIEG 182
+ HSY + + + +V E AC G ++D+I + +
Sbjct: 122 ISS-------HSYKLR-----LEKLNPKYKVYEQACPLFVPLVENGFICRDDQIVRLVIR 169
Query: 183 CFI-EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA------RRARCLLP 235
++ E + D ++L CTHYPL+ V +D+ A R LL
Sbjct: 170 RYLSELKETGVDTLILGCTHYPLLRDAIADFMGDGVTLVDSGYETAIYCSKILRENNLLN 229
Query: 236 RINTHQTRVFDDHALFLSGKPD 257
HQT F ++S PD
Sbjct: 230 TDGVHQTPEF-----YVSDTPD 246
>gi|319942509|ref|ZP_08016819.1| hypothetical protein HMPREF9464_02038 [Sutterella wadsworthensis
3_1_45B]
gi|319803912|gb|EFW00830.1| hypothetical protein HMPREF9464_02038 [Sutterella wadsworthensis
3_1_45B]
Length = 271
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I I DSG GGL V + +R +P ++ AD PYG+ ++ RL + S +L +
Sbjct: 7 IGILDSGFGGLSVARAIRAAIPNEDLVFAADCAYAPYGDNSSEYIQARLEHVVSFLLAQQ 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V ACNTA + R+ SM +G PA+ A +T++G I +L+T T+
Sbjct: 67 VKAL-VFACNTATAVGIRAFRARL-SMPIIGIEPAVFPALRHTRTGHIGVLATCRTIESQ 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-------- 187
+++ H + + S + V + C + E + + + + +
Sbjct: 125 KYADVRHRAIEWAEV----SRPMPVTVWDVPCP-GLMECVERGDFDSANVHELLVRYVDP 179
Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSP 214
D IVL CTHYP + + + +P
Sbjct: 180 LTAHNVDEIVLGCTHYPFLANAIAKHAP 207
>gi|302384966|ref|YP_003820788.1| glutamate racemase [Clostridium saccharolyticum WM1]
gi|302195594|gb|ADL03165.1| glutamate racemase [Clostridium saccharolyticum WM1]
Length = 272
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
+ I +FDSG+GGL V +++ MP+ +Y D PYG+ + ++ + FL
Sbjct: 5 NSPIGVFDSGVGGLTVAREIMRQMPDERIVYFGDTARVPYGSKSCSTVIRFTRQIIRFLL 64
Query: 69 SDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + VIACNT A ++ E+ + GA + A T++G I
Sbjct: 65 TQDVKAI-----VIACNTATACALEAVEKEVEIPIVGVIHAGA----RTAVDSTKNGKIG 115
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
I+ T T+R + ++ + +L VEE + D + EI +
Sbjct: 116 IIGTEGTIRSGVYTRVMKEMREDIDVTGKPCPLLVPLVEE-----GLLHDSVTDEIASRY 170
Query: 185 I-EKEGKRTDVIVLACTHYPLI-VHVFRQLSP 214
+ E +GK D +VL CTHYPL+ V R + P
Sbjct: 171 LSELKGKYIDTLVLGCTHYPLLRSTVGRLMGP 202
>gi|260559213|ref|ZP_05831399.1| glutamate racemase [Enterococcus faecium C68]
gi|261207746|ref|ZP_05922431.1| glutamate racemase [Enterococcus faecium TC 6]
gi|314939892|ref|ZP_07847098.1| glutamate racemase [Enterococcus faecium TX0133a04]
gi|314943739|ref|ZP_07850478.1| glutamate racemase [Enterococcus faecium TX0133C]
gi|314949695|ref|ZP_07853013.1| glutamate racemase [Enterococcus faecium TX0082]
gi|314953241|ref|ZP_07856180.1| glutamate racemase [Enterococcus faecium TX0133A]
gi|314993679|ref|ZP_07859027.1| glutamate racemase [Enterococcus faecium TX0133B]
gi|314997404|ref|ZP_07862355.1| glutamate racemase [Enterococcus faecium TX0133a01]
gi|260074970|gb|EEW63286.1| glutamate racemase [Enterococcus faecium C68]
gi|260078129|gb|EEW65835.1| glutamate racemase [Enterococcus faecium TC 6]
gi|313588539|gb|EFR67384.1| glutamate racemase [Enterococcus faecium TX0133a01]
gi|313591853|gb|EFR70698.1| glutamate racemase [Enterococcus faecium TX0133B]
gi|313594707|gb|EFR73552.1| glutamate racemase [Enterococcus faecium TX0133A]
gi|313597602|gb|EFR76447.1| glutamate racemase [Enterococcus faecium TX0133C]
gi|313640855|gb|EFS05435.1| glutamate racemase [Enterococcus faecium TX0133a04]
gi|313643953|gb|EFS08533.1| glutamate racemase [Enterococcus faecium TX0082]
Length = 273
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 11/223 (4%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++ +P + ++V D PYG + + + +D L +
Sbjct: 13 IDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQYTWEMTDYLVEQGIK 71
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T++
Sbjct: 72 MLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAY 130
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ V + + ++ S VE EY + KK + K+ D +
Sbjct: 131 EKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIVAETLAPLTTKKIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+L CTHYPL+ + + + V +D+ LL N
Sbjct: 185 ILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFN 227
>gi|229108454|ref|ZP_04238071.1| Glutamate racemase [Bacillus cereus Rock1-15]
gi|228675081|gb|EEL30308.1| Glutamate racemase [Bacillus cereus Rock1-15]
Length = 265
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 103/240 (42%), Gaps = 11/240 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA EL+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 60 KTLVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRTDV 194
+H + +H + LA+ VE ED + ++++ + + D
Sbjct: 119 YEKALHELDTYLEVHSYACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDIDT 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ ++ + + +++ A +L + H F +G
Sbjct: 173 LILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 232
>gi|151567725|pdb|2JFU|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate
Racemase In Complex With Phosphate
gi|151567726|pdb|2JFV|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate
Racemase In Complex With Citrate
gi|151567727|pdb|2JFW|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate
Racemase In Complex With Tartrate
Length = 291
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
DN P I DSG+GGL V+++ +P + ++V D PYG + +
Sbjct: 24 DNRP--------IGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQ 74
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122
+ +D L + + VIACNTA + +E+++ S+ +G + P + A TQ+
Sbjct: 75 YTWEMTDYLVEQGIKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQ 133
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEI 180
+ I+ T T++ + V + + ++ S VE EY + KK +
Sbjct: 134 VGIIGTIGTVKSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIV 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
K+ D ++L CTHYPL+ + + + V +D+ LL N
Sbjct: 188 AETLAPLTTKKIDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFN 245
>gi|78779002|ref|YP_397114.1| glutamate racemase [Prochlorococcus marinus str. MIT 9312]
gi|78712501|gb|ABB49678.1| glutamate racemase [Prochlorococcus marinus str. MIT 9312]
Length = 264
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%), Gaps = 29/265 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWEDHALKKRLMFLFSDILD 73
I IFDSGIGG +L + + Y+AD P+G N+E+ L + + F + D
Sbjct: 5 IGIFDSGIGGFTILNSLLKTRNDVEVFYLADTKRIPFGDKNFEEIRLIAKEICNFFE--D 62
Query: 74 KYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
K L +IACNT A +++++L+ P + +V I +I IL+T
Sbjct: 63 KNLDAL-LIACNTTNACALDILENDLK--IPCFDLINSVSEI------VNKQIIGILATK 113
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI-KIKEDEIK-KEIEGCFIEK 187
T+R +Y N I S +S I + E+ I + K D IK + +++
Sbjct: 114 TTVRSSYYKNAISSKKE-------NSKIFQNECPEFVSEIEREKLDFIKLNNLSDLYLKP 166
Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR--ARCLLPRINTHQTRV 244
K + I+L C+HYPLI R+ + +D S+++ ++ +P+ + +++
Sbjct: 167 LLNKNIEEIILGCSHYPLIYEFLRKKISSNIKIIDPSEALIKKFNESFAIPKTDRYESLS 226
Query: 245 FDDHALFLSGKPDIAMRRLMQGFGL 269
F++ F++ + D +++ G+
Sbjct: 227 FENVKFFVTSERDKFSKKVKFWLGI 251
>gi|257898669|ref|ZP_05678322.1| glutamate racemase [Enterococcus faecium Com15]
gi|257836581|gb|EEV61655.1| glutamate racemase [Enterococcus faecium Com15]
Length = 273
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 11/223 (4%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++ +P + ++V D PYG + + + +D L +
Sbjct: 13 IDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQYTWEMTDYLVEQGIK 71
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T++
Sbjct: 72 MLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAY 130
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ V + + ++ S VE EY + KK + K+ D +
Sbjct: 131 EKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIVAETLAPLTTKKIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+L CTHYPL+ + + + V +D+ LL N
Sbjct: 185 ILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFN 227
>gi|21903447|sp|Q9XDZ7|MURI_CORGL RecName: Full=Glutamate racemase
Length = 273
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 6/195 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++
Sbjct: 13 IGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADELVERG 72
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 73 CKMI-VIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTINSG 131
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L + S +V + + R ++ +I + + + D +
Sbjct: 132 AYQDLFSASPS-----IVVNAVACPRFVDFVERGITSGRQILNIAQDYLEPLQAEGVDTL 186
Query: 196 VLACTHYPLIVHVFR 210
VL CTHYPL+ V +
Sbjct: 187 VLGCTHYPLLSGVIQ 201
>gi|20806735|ref|NP_621906.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4]
gi|24418566|sp|Q8RD38|MURI1_THETN RecName: Full=Glutamate racemase 1
gi|20515192|gb|AAM23510.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4]
Length = 266
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 24/231 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I I DSG+GG+ VL+++ ++PE +IY D + PYGN ++K + L K
Sbjct: 7 IGIIDSGVGGITVLKRLLEILPEEDYIYFGDTLRVPYGNRPKEEIEK-FTREIVNYLKKQ 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNT + I ++ + + F IK A T +G I +++T T+
Sbjct: 66 KVKAVVIACNTICSSIN---KNDYEILMFGILEAGIKSAVEATSNGRIGVIATKRTVE-- 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKED------EIKKEIEGCFIEK 187
S+ ++ + + + V + AC + I E+ I ++ C E
Sbjct: 121 ----------SEAYLKGIKRLNRNAMVFQKACPELVLIVENGFYEASSIYSAVKKCTEEF 170
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
K D +VL CTH+P+++ ++ V +D + +A + L N
Sbjct: 171 LEKDIDTLVLGCTHFPILLPFIERVVDNKVTVVDPAIKLAHEVKKYLVENN 221
>gi|306836771|ref|ZP_07469732.1| glutamate racemase [Corynebacterium accolens ATCC 49726]
gi|304567358|gb|EFM42962.1| glutamate racemase [Corynebacterium accolens ATCC 49726]
Length = 259
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P+ IY D PYG ++ + ++++
Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPQESVIYKGDTAHGPYGPRPISQVRAFSQDIADELVE 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ +L VIACNTA + R + + L + PA+++A + T++G I ++ T T+
Sbjct: 66 RGCKML-VIACNTATAAFLHDARERY-DIPILEVIRPAVRRAMSTTRNGKIGVIGTEGTI 123
Query: 133 RRTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +L + + + C + V I A R +I EG
Sbjct: 124 KSGAYQDLFAVNPNVEAVAAACPDFVPFVERGITAGR-------------QILGVAEGYL 170
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + D +VL CTHYPL+ + + V + +S+ + LL
Sbjct: 171 APLQAQGVDTLVLGCTHYPLLTGIIQLAMGENVSLVTSSEETTKDVMRLL 220
>gi|256544593|ref|ZP_05471965.1| glutamate racemase [Anaerococcus vaginalis ATCC 51170]
gi|256399482|gb|EEU13087.1| glutamate racemase [Anaerococcus vaginalis ATCC 51170]
Length = 249
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 21/223 (9%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70
+I +FDSG+GGL VL+++ +F Y+ D+ PYG+ + + KK + FL
Sbjct: 3 NIGVFDSGLGGLTVLKELSKKHKANYF-YLGDNKNVPYGDKSNEEIIELSKKIVKFLLKK 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+D + VIACNT T+ + LR F AIK++ G I +++T A
Sbjct: 62 DIDFF-----VIACNTISTVAIEYLRKEFDKKFISITDQAIKKSLEC--EGDIFVMATKA 114
Query: 131 T-LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T L+ TY + + S + + +L S +E+ GI +K D + K ++
Sbjct: 115 TCLQHTYKIKIEEN--SNKKVFEKACPLLVSLIEK---GI-VKGDVLDKALKDYLELANE 168
Query: 190 KRTDVIVLACTHYPLIV-HVFRQLSPWPVDWLDNSDSIARRAR 231
K+ + IVL CTHYP++ +F+ L+ + + +D ++ +A+ +
Sbjct: 169 KKIENIVLGCTHYPIVEDEIFKNLN-YKANIIDPANVLAQNIK 210
>gi|19553709|ref|NP_601711.1| glutamate racemase [Corynebacterium glutamicum ATCC 13032]
gi|62391349|ref|YP_226751.1| glutamate racemase [Corynebacterium glutamicum ATCC 13032]
gi|21325280|dbj|BAB99902.1| Glutamate racemase [Corynebacterium glutamicum ATCC 13032]
gi|41326690|emb|CAF21172.1| GLUTAMATE RACEMASE [Corynebacterium glutamicum ATCC 13032]
Length = 284
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 6/195 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++
Sbjct: 24 IGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADELVERG 83
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 84 CKMI-VIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTINSG 142
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L + S +V + + R ++ +I + + + D +
Sbjct: 143 AYQDLFSASPS-----IVVNAVACPRFVDFVERGITSGRQILNIAQDYLEPLQAEGVDTL 197
Query: 196 VLACTHYPLIVHVFR 210
VL CTHYPL+ V +
Sbjct: 198 VLGCTHYPLLSGVIQ 212
>gi|326773725|ref|ZP_08233008.1| glutamate racemase [Actinomyces viscosus C505]
gi|326636955|gb|EGE37858.1| glutamate racemase [Actinomyces viscosus C505]
Length = 294
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++D+
Sbjct: 6 IGMFDSGVGGLTVARSVLDQLPHEQVLYIGDTANSPYGPRDIAEVRSLALGIMDELVDRG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L VIACNTA + + R + + + PA + AA T++G + +++T T
Sbjct: 66 VKLL-VIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGT 124
Query: 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ R Y L + + LVS R E A E+ E +
Sbjct: 125 VDSRAYDDAL----QAVPGVELVSQA--CPRFVELAERGVTTGPEVLDVAEEYLAPIKAA 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYPL+V + V + +SD A+
Sbjct: 179 GVDTLILGCTHYPLLVGPISYVMGRDVTLVTSSDETAK 216
>gi|145296506|ref|YP_001139327.1| glutamate racemase [Corynebacterium glutamicum R]
gi|140846426|dbj|BAF55425.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 284
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 6/195 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++++
Sbjct: 24 IGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADELVERG 83
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 84 CKMI-VIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTINSG 142
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L + S +V + + R ++ +I + + + D +
Sbjct: 143 AYQDLFSASPS-----IVVNAVACPRFVDFVERGITSGRQILNIAQDYLEPLQAEGVDTL 197
Query: 196 VLACTHYPLIVHVFR 210
VL CTHYPL+ V +
Sbjct: 198 VLGCTHYPLLSGVIQ 212
>gi|219685353|ref|ZP_03540172.1| glutamate racemase [Borrelia garinii Far04]
gi|219673126|gb|EED30146.1| glutamate racemase [Borrelia garinii Far04]
Length = 260
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + +++L
Sbjct: 2 KNFKEVIIVFDSGIGGLSYFKYIKNKIDGYQYVYVADNKNFPYGEKSSEYLLEAILYLIE 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ Y ++ACNT + ++L FP + L V I A + +++T
Sbjct: 62 KLNKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSLISDLAL----KRVLLIATN 117
Query: 130 ATLRRTYTSNLIHSYVSQCHIH----LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
TL + + Q +IH + ++ L + VE G K ++D ++ +E
Sbjct: 118 TTLESKFVKD-------QVNIHNDLIVKAAGELVNFVEH---GEKYRKDALRC-LEALKF 166
Query: 186 EKEGKRTDVIVLACTHY 202
E +++ L CTHY
Sbjct: 167 EVVNTDREIVFLGCTHY 183
>gi|260910465|ref|ZP_05917134.1| glutamate racemase [Prevotella sp. oral taxon 472 str. F0295]
gi|260635411|gb|EEX53432.1| glutamate racemase [Prevotella sp. oral taxon 472 str. F0295]
Length = 279
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 13/229 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + F ++ +
Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYG---PRSFDVVYQFTRQAVIKLF 67
Query: 76 QPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ L +I CNTA ++ + +L S LG + P + + T + + IL+
Sbjct: 68 EQGCHLIIIGCNTASAKALRSIQQRDLPSLDAKRRVLGIIRPTAETIGSLTATRHVGILA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ I + ++ + A+ VE + +KK I+ + +
Sbjct: 128 TEGTIKSDSYRLEIQKLFPDIQVQGMACPLWAAIVEANEADSPGADYFVKKRIDA--LMR 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D IVL CTHYPL+++ + P V + + +A + L R
Sbjct: 186 TDPQIDAIVLGCTHYPLLMNSIVKHVPSGVRIVPQGEYVANSLQQYLQR 234
>gi|154484251|ref|ZP_02026699.1| hypothetical protein EUBVEN_01963 [Eubacterium ventriosum ATCC
27560]
gi|149734728|gb|EDM50645.1| hypothetical protein EUBVEN_01963 [Eubacterium ventriosum ATCC
27560]
Length = 270
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDIL 72
+I +FDSG+GGL V +++ +PE Y D PYG+ + + R + F L
Sbjct: 7 AIGVFDSGVGGLTVAREIIRQLPEESITYFGDTARVPYGSKSKDTIIRYSRQIIRF---L 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
V+ACNTA D + + +G V P K A T++ I I+ T T
Sbjct: 64 KTKNVKAIVVACNTASAFALDTIEKEI-DIPIIGVVKPGAKSAVESTKNKRIGIIGTEGT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190
++ + IHS + + + + VEE + D + E+ ++E + +
Sbjct: 123 IKSELYTQYIHSIDPEITVVGKACPLFVPLVEE-----GMLHDSVTDEVASRYLESMKEE 177
Query: 191 RTDVIVLACTHYPLI 205
D ++L CTHYPL+
Sbjct: 178 NIDSLILGCTHYPLL 192
>gi|125624017|ref|YP_001032500.1| glutamate racemase [Lactococcus lactis subsp. cremoris MG1363]
gi|166231039|sp|A2RKH0|MURI_LACLM RecName: Full=Glutamate racemase
gi|124492825|emb|CAL97780.1| MurI protein [Lactococcus lactis subsp. cremoris MG1363]
gi|300070787|gb|ADJ60187.1| glutamate racemase [Lactococcus lactis subsp. cremoris NZ9000]
Length = 271
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 24/249 (9%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V +++ +P +Y+ D PYG +
Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ + +L K ++ V+ACNT A ++K+EL + GA AI++ T
Sbjct: 53 FTWDMVNFLLSKNVKMI-VMACNTATAMALEIVKEELDIPVIGVILPGASSAIQK----T 107
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ I +++T A++R I S + ++ S VE E EI K
Sbjct: 108 KTNKIGVIATQASIRSDEYHKTIARKSSAIEVLSLACPKFVSIVESNEM-----ESEIAK 162
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--R 236
+ + + D ++L CTHYPL+ + ++ V +D+ R LL
Sbjct: 163 RVVSESLAPLVGKIDTLILGCTHYPLLRPLIQETMGKEVRLIDSGAEAVRDISVLLNYFE 222
Query: 237 INTHQTRVF 245
IN H+ + F
Sbjct: 223 INAHERKEF 231
>gi|227488222|ref|ZP_03918538.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227542820|ref|ZP_03972869.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51866]
gi|227091792|gb|EEI27104.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227181446|gb|EEI62418.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51866]
Length = 261
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P Y+ D PYG ++ L +D L
Sbjct: 6 IGIFDSGVGGLTVARAIADQLPHESIHYLGDTAHAPYGPRTADEVRA-LSTSVADQLVAR 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNTA ++ DE R+ + + LG + PA+++A T++G +++L T T+R
Sbjct: 65 DIKLLVIACNTATSVFLDEARALY-DVPVLGVIEPAVRRAVQVTKNGKVAVLGTVGTIRS 123
Query: 135 TYTSNLIHSYVS-QCH-------IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+ SY C+ + V I R +I +
Sbjct: 124 GEYQRQMESYEGVTCYAAPAPRFVDFVERGITTGR-------------QILGVAQAYVSP 170
Query: 187 KEGKRTDVIVLACTHYPLIVHVFR 210
+ D VL CTHYPL+ V +
Sbjct: 171 LQEAGVDTCVLGCTHYPLLSGVIQ 194
>gi|288928934|ref|ZP_06422780.1| glutamate racemase [Prevotella sp. oral taxon 317 str. F0108]
gi|288329918|gb|EFC68503.1| glutamate racemase [Prevotella sp. oral taxon 317 str. F0108]
Length = 279
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++N+P + I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG +
Sbjct: 1 MNNFPQQA---GPIGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYG---PRSFDV 54
Query: 63 RLMFLFSDILDKYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQA 114
F ++ ++ L +I CNTA ++ + +L S LG + P +
Sbjct: 55 VYQFTRQAVVKLFEQGCHLIIIGCNTASAKALRSIQQRDLPSLDAKRRVLGIIRPTAESI 114
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
+ T + + IL+T T++ I + ++ + A+ VE +
Sbjct: 115 GSLTSTRHVGILATEGTIKSDSYRLEIQKLFPDIVVQGMACPLWAAIVEANEADSPGADY 174
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+KK I+ + + D IVL CTHYPL+++ + P V + + +A + L
Sbjct: 175 FVKKRIDSLL--RTDPQIDAIVLGCTHYPLLMNSIVKHVPPGVRIVPQGEYVANSLQQYL 232
Query: 235 PR 236
R
Sbjct: 233 QR 234
>gi|314930288|gb|EFS94119.1| glutamate racemase [Propionibacterium acnes HL067PA1]
Length = 284
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 112/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA +A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAACRASAATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEA------ 181
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESG 229
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+ + FL+ + + RRLM+GF
Sbjct: 230 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|167626313|ref|YP_001676813.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|241668746|ref|ZP_04756324.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254877277|ref|ZP_05249987.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|167596314|gb|ABZ86312.1| Glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|254843298|gb|EET21712.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 265
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 15/194 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL V++ + ++P IY D PYG ++K ++D+
Sbjct: 7 IGVFDSGIGGLTVVKNLMNILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQE 66
Query: 76 QPVLSVIACNTAFTLIKD---ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ +IACNT + KD E+ T P + + A ++ + + +++TPAT+
Sbjct: 67 VKAI-IIACNTISAIAKDIVQEIAKTVPVIDVISAGVSLVDSLK-----TVGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191
+ IH ++ S + S +EE E E+ + + ++E K
Sbjct: 121 NSNAYALQIHKNNPSTEVYSSSCGLFVSMIEE-----GFIEGEVVELVAKQYLEYFNDKN 175
Query: 192 TDVIVLACTHYPLI 205
++L CTHYP+I
Sbjct: 176 IQALILGCTHYPII 189
>gi|301596669|ref|ZP_07241677.1| glutamate racemase [Acinetobacter baumannii AB059]
Length = 256
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P +Y AD PYG D +++ L D L + ++V+ACNTA D L
Sbjct: 11 LPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQGCKIAVVACNTASAFSLDHL 69
Query: 96 RSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV--SQCHIHL 152
R + +G VPA+K A T+S ++++L+TPAT R +++ + + +
Sbjct: 70 REHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKFAVPAGVKVMT 129
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
++S+ L VE + + +++ ++ ++G D +VL CTHYP + L
Sbjct: 130 LTSLELVPCVEAGQQMSPVCLNALREVLQPAV--EQG--ADYLVLGCTHYPFLNEAIHHL 185
Query: 213 SPWPVDWLDNSDSIARR-ARCLL 234
+D+ ++AR+ AR L+
Sbjct: 186 FDNQFTLVDSGLAVARQTARILI 208
>gi|282880529|ref|ZP_06289236.1| glutamate racemase [Prevotella timonensis CRIS 5C-B1]
gi|281305632|gb|EFA97685.1| glutamate racemase [Prevotella timonensis CRIS 5C-B1]
Length = 292
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 9/219 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L +R L+P+Y F+Y+ D+ PYG + + + + + +
Sbjct: 19 IGVFDSGYGGLTILHSIRRLLPQYDFLYLGDNARAPYGTRSFEVVYEFTLQAVTKLFE-M 77
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ CNTA ++ +++L LG + P + TQS + +L+T
Sbjct: 78 GCHLVILGCNTASAKALRSIQQNDLPHLDAKRRVLGVIRPTAEIIGKLTQSRHVGLLATE 137
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I + + V+ VE + +KK ++ + K+G
Sbjct: 138 GTVKSESYPLEIQKFYPDIQVSGVACPFWVPLVEYNEANSPGADYFVKKRMD-ALMAKDG 196
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D I+L CTHYPL++ + + V + + +AR
Sbjct: 197 A-IDTIILGCTHYPLLMAKIEKYNKPGVRIVAQGEYVAR 234
>gi|210632427|ref|ZP_03297355.1| hypothetical protein COLSTE_01251 [Collinsella stercoris DSM 13279]
gi|210159522|gb|EEA90493.1| hypothetical protein COLSTE_01251 [Collinsella stercoris DSM 13279]
Length = 292
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 15/240 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + +P YV D PYG + ++ + L
Sbjct: 5 ERPIGVFDSGLGGLTVARCIAESLPHESIYYVGDTKRCPYGVRSEEEVRA-FVLQAGHWL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA + P P + A T++ + +L+TP T+
Sbjct: 64 AEHDVKIMVIACNTATAAGLRIAQQILPVPVIGVIAPGARAAINSTRTRKVGVLATPLTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKE-----------DEIKKEI 180
R + I + +++ + VE E A G ++E E + E+
Sbjct: 124 RTGAYTRAIQDLDAGVNVYGCPAPSFVEIVERELATGAHLQERWLQDGDIFDTPENRAEV 183
Query: 181 EGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
E I + G + D +VL CTH+PL+ R V + +++ R +L R N
Sbjct: 184 ERTLAPIVEGGAQVDTVVLGCTHFPLLAGPIRHALGPDVRVVSSAEETTRELEDILRRRN 243
>gi|72162561|ref|YP_290218.1| glutamate racemase [Thermobifida fusca YX]
gi|71916293|gb|AAZ56195.1| glutamate racemase [Thermobifida fusca YX]
Length = 256
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 11/195 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R + P+ I D P+G + R + +LD+
Sbjct: 3 IALVDSGIGLLSTAAALRRIRPDADLILSMDPDYMPWGPRSVPEIVARALAGARAVLDE- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
QP V+ACNTA + LR+ P + +G VPA+K AA + +I +TPAT
Sbjct: 62 QPDAVVVACNTASVHALESLRAELEPRIPVIGTVPAVKPAA--DRGAPFAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +LI + + V+ LA VE + + + ++
Sbjct: 120 PYQRDLIDRFARGIAVTPVACPGLADAVE------RADPAAVAEAVDHAAAHTPAD-VSA 172
Query: 195 IVLACTHYPLIVHVF 209
+VL CTHY L+ V
Sbjct: 173 VVLGCTHYDLVSDVI 187
>gi|311741210|ref|ZP_07715034.1| glutamate racemase [Corynebacterium pseudogenitalium ATCC 33035]
gi|311303380|gb|EFQ79459.1| glutamate racemase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 259
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P IY D PYG ++ + +++
Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPHESVIYTGDTAHSPYGPRPISEVRAFSQGVADRLVE 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ +L VIACNTA + R + PA+++A + T++G I ++ T T++
Sbjct: 66 RGCKML-VIACNTATAAFLHDARERYDIPIVEVIRPAVRRAMSTTRNGKIGVIGTEGTIK 124
Query: 134 RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+L + ++ + C + V I A R +I EG
Sbjct: 125 SGAYQDLFALNPKVQAFATACPDFVPFVERGITAGR-------------QILGVAEGYLA 171
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFR 210
+ + D +VL CTHYPL+ + +
Sbjct: 172 PLQAQGVDTLVLGCTHYPLLTGIIQ 196
>gi|163791540|ref|ZP_02185944.1| glutamate racemase [Carnobacterium sp. AT7]
gi|159873176|gb|EDP67276.1| glutamate racemase [Carnobacterium sp. AT7]
Length = 272
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 11/229 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V+++ +P YV D PYG + +++ + +L
Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEEQVRQFTWEMTHFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+K +L VIACNTA + ++L+ ++ +G + P + A T++ I ++ T T
Sbjct: 63 NKDIKML-VIACNTATAVALEDLKKKL-AIPIIGVILPGSRAAIKATKNNHIGVIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEG 189
++ +I S + + ++ VE EY I KK + +
Sbjct: 121 VKSEKYKKMIQSKDTLASVSSLACPKFVPIVESNEYGSAIA------KKIVAETLKPFKN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
K D ++L CTHYPL+ + + + V +D+ +L N
Sbjct: 175 KNIDTLILGCTHYPLLRPIIQNVMGDSVTLIDSGAETISEVSTILDYFN 223
>gi|332665127|ref|YP_004447915.1| glutamate racemase [Haliscomenobacter hydrossis DSM 1100]
gi|332333941|gb|AEE51042.1| Glutamate racemase [Haliscomenobacter hydrossis DSM 1100]
Length = 267
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL V + +P IY D PYG+ A++ + + +LD+
Sbjct: 8 IGVFDSGIGGLTVANAIVKKLPNEEIIYFGDTAHLPYGDKSADAIRYYCLRISKFLLDQG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++ V+ACN+A + D L F A F+ V + A A + +++T AT++
Sbjct: 68 CKMI-VVACNSASSAGYDVLLEFFRDQALFVNVVDPLVSAVAKRGFDKVGVIATKATVQS 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRTD 193
+H ++ +++ +LA +EE ++ K I ++ G +
Sbjct: 127 GIYHKQLHRVSPTLNVESLATPLLAPMIEE-----GFVHNQASKAILDMYLAHPGFVDIE 181
Query: 194 VIVLACTHYPLI 205
++LACTHYPLI
Sbjct: 182 ALLLACTHYPLI 193
>gi|313887367|ref|ZP_07821057.1| glutamate racemase [Porphyromonas asaccharolytica PR426713P-I]
gi|312923135|gb|EFR33954.1| glutamate racemase [Porphyromonas asaccharolytica PR426713P-I]
Length = 281
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 27/222 (12%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++++ I +FDSG GGL +L+K++ +P+Y F+Y+ D+ PYG+ + +
Sbjct: 2 QQIEGPIGVFDSGYGGLTILRKLQEQLPQYDFVYLGDNARSPYGSRSMRVVYQFTREAVE 61
Query: 70 DILDKYQPVLSVIACNTAFT-LIKDELRSTFPSM-------AFLGAV-PAIKQAAAYTQS 120
+ D P L ++ACNTA ++ + P + LG + P ++ T +
Sbjct: 62 RLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTST 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE----- 175
+ IL+T T+ SYV++ H ++ + ++ E +
Sbjct: 121 KHVGILATEGTVSS-------ESYVTEIHKLYPDVTVVQEACPLWVPIVETGESDSPGAD 173
Query: 176 --IKKEIEGCFIEKEGKRTDVIVLACTHYPLIV-HVFRQLSP 214
++K +E + E + D I+L CTHYP+++ + R L+P
Sbjct: 174 FFVRKHLERLLAQDE--KIDTIILGCTHYPILMPKIQRLLTP 213
>gi|126640457|ref|YP_001083441.1| glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 256
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P +Y AD PYG D +++ L D L + ++V+ACNTA D L
Sbjct: 11 LPNERIVYYADTAYVPYGPRSDEEIRE-LTARAVDWLYRQGCKIAVVACNTASAFSLDHL 69
Query: 96 RSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV--SQCHIHL 152
R + +G VPA+K A T+S ++++L+TPAT R +++ + + +
Sbjct: 70 REHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKFAVPAGVKVMT 129
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
++S+ L VE + + +++ ++ ++G D +VL CTHYP + L
Sbjct: 130 LTSLELVPCVEAGQQMSPVCLNALREVLQPAV--EQG--ADYLVLGCTHYPFLNEAIHHL 185
Query: 213 SPWPVDWLDNSDSIARR-ARCLL 234
+D+ ++AR+ AR L+
Sbjct: 186 FDNQFTLVDSGLAVARQTARILI 208
>gi|313890894|ref|ZP_07824518.1| glutamate racemase [Streptococcus pseudoporcinus SPIN 20026]
gi|313120792|gb|EFR43907.1| glutamate racemase [Streptococcus pseudoporcinus SPIN 20026]
Length = 264
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 10/243 (4%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V++++ +P + +YV D PYG +++ L + ++ K +
Sbjct: 9 LDSGVGGLTVVRELMRQLPYENIVYVGDSARAPYGPRPAEQIREYTWELVNFLVTKNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E++ + LG + P A T G + ++ TP T+
Sbjct: 69 I-VFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGHVGVIGTPMTVTSDIY 126
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
I + ++ VE +I+ KK + GK D +VL
Sbjct: 127 RQKIQLLAPAVEVISLACPKFVPIVESN----EIQSSVAKKVVYETLAPLVGK-VDTLVL 181
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALFLSGK 255
CTHYPL+ + + + V +D+ R LL + +R + H + +
Sbjct: 182 GCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINSSRYQEKVRHYFYTTAS 241
Query: 256 PDI 258
P+I
Sbjct: 242 PEI 244
>gi|313835875|gb|EFS73589.1| glutamate racemase [Propionibacterium acnes HL037PA2]
gi|314927125|gb|EFS90956.1| glutamate racemase [Propionibacterium acnes HL044PA1]
gi|314970768|gb|EFT14866.1| glutamate racemase [Propionibacterium acnes HL037PA3]
gi|328906033|gb|EGG25808.1| glutamate racemase [Propionibacterium sp. P08]
Length = 284
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG ++ + +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRHYALQCLDRL 68
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ L +IACNTA + + + R + +PA ++A++ T++G I ++ T AT
Sbjct: 69 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASSATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + +Y I+
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIARQYLAPIQEA------ 181
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + V + +S AR + L
Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLIAYVLGDDVTLISSSHQCARASYSLTAESG 229
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+R + FL+ + + RRLM+GF
Sbjct: 230 LLHSRPRESSRYFLTTGNAERFERLGRRLMEGF 262
>gi|28210023|ref|NP_780967.1| glutamate racemase [Clostridium tetani E88]
gi|28202458|gb|AAO34904.1| glutamate racemase [Clostridium tetani E88]
Length = 266
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL +++++ L+P + Y D+ PYGN + + + ++ +
Sbjct: 14 IGVLDSGVGGLTTVKELQELLPNENIYYFGDNKNVPYGNKTQEEIIQFTRNMIEFLVSQN 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V++V ACNT T+I D++ + P + + + +++T T+
Sbjct: 74 VKVIAV-ACNTISTII-DKISGDYDVKIIKVIDPIVNNIKNIQKKHKVGLIATSFTISTK 131
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y ++ + S LA+ V+ K +D IK IE K + D I
Sbjct: 132 YYDEML----GDVKVIGKGSPELAAIVDSGEINEKEVKDIIKVHIEDI---KSRENVDTI 184
Query: 196 VLACTHYPLIVHVFRQLSP 214
+L CTHYP+I H F + P
Sbjct: 185 ILGCTHYPIIKHFFDECYP 203
>gi|239944153|ref|ZP_04696090.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|239990608|ref|ZP_04711272.1| glutamate racemase [Streptomyces roseosporus NRRL 11379]
gi|291447623|ref|ZP_06587013.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|291350570|gb|EFE77474.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
Length = 277
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL V+ ++ L+P H IY+ D PYG ++K + ++
Sbjct: 8 IGVFDSGFGGLTVVSALQRLLPSEHIIYLGDSARQPYGARRLAEVRKMSLECLDQLVGLG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT-L 132
+ VIACNTA + + R + P + +G PA + AA+ T++ + ++ T AT +
Sbjct: 68 VKAI-VIACNTASAAVLRDARERYQVPVIEVVG--PASRMAASATKNHSVGVVCTEATRV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEGK 190
+ Y ++ + HI LV+ A V G+ + + ++ +E +
Sbjct: 125 AKAYED----AFAAAPHIDLVTKACPAF-VGFVEAGVTTGPELVSVAEQYLTPLVEAD-- 177
Query: 191 RTDVIVLACTHYPLI 205
D ++L CTHYPLI
Sbjct: 178 -IDTLILGCTHYPLI 191
>gi|169829488|ref|YP_001699646.1| glutamate racemase [Lysinibacillus sphaericus C3-41]
gi|229486243|sp|B1HW77|MURI_LYSSC RecName: Full=Glutamate racemase
gi|168993976|gb|ACA41516.1| Glutamate racemase [Lysinibacillus sphaericus C3-41]
Length = 265
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 12/243 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V +++ +P Y+ D PYG ++ + + L+K
Sbjct: 5 IGVIDSGVGGLTVAKEIIKRLPNETIYYIGDTARCPYGPRSRQEVRN-FTWQMAKALEKM 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134
+ VIACNTA + + L+ P LG + A +AA T+ + +L+T T++
Sbjct: 64 NIKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEGTIKS 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ S + HI ++ VE EY K + K I + ++
Sbjct: 123 GAYEEALLSLNTSTHIIPLACPTFVPLVESGEY------KGEFATKLIAEGLKPLKNQQF 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
D ++L CTHYP++ + V+ L +++ A+ A+ +L T H F
Sbjct: 177 DTVILGCTHYPILQKQIEAVVGEEVNVLSSAEETAKDAQEMLAYNGTLANANTVPAHKFF 236
Query: 252 LSG 254
+G
Sbjct: 237 ATG 239
>gi|293572584|ref|ZP_06683558.1| glutamate racemase [Enterococcus faecium E980]
gi|291607367|gb|EFF36715.1| glutamate racemase [Enterococcus faecium E980]
Length = 270
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++ +P + ++V D PYG + + + +D L +
Sbjct: 10 IDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQV-IQYTWEMTDYLVEQGIK 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T++
Sbjct: 69 MLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAY 127
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ V + + ++ S VE EY + KK + K+ D +
Sbjct: 128 EKALKEKVPELTVTSLACPKFVSVVESNEYHSSVA------KKIVAETLAPLTTKKIDTL 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+L CTHYPL+ + + + V +D+ LL
Sbjct: 182 ILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLL 220
>gi|254478075|ref|ZP_05091458.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
gi|214035937|gb|EEB76628.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
Length = 278
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 24/231 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GG+ VL+++ ++PE +IY D + PYGN ++K + L K
Sbjct: 19 IGVIDSGVGGITVLKRLLEILPEEDYIYFGDTLRVPYGNRPKEEIEK-FTREIVNYLKKQ 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNT + I ++ + + F IK A T +G I +++T T+
Sbjct: 78 KVKAVVIACNTICSSIN---KNDYEILMFGILEAGIKSAVEATSNGRIGVIATKRTVE-- 132
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKED------EIKKEIEGCFIEK 187
S+ ++ + + + V + AC + I E+ I ++ C E
Sbjct: 133 ----------SEAYLKGIKRLNRNAMVFQKACPELVLIVENGFYEASSIYTAVKKCTEEF 182
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
K D +VL CTH+P+++ ++ V +D + +A + L N
Sbjct: 183 LEKDIDTLVLGCTHFPILLPFIERVVDNKVTVVDPAIKLAHEVKKYLVENN 233
>gi|298345217|ref|YP_003717904.1| glutamate racemase [Mobiluncus curtisii ATCC 43063]
gi|298235278|gb|ADI66410.1| glutamate racemase [Mobiluncus curtisii ATCC 43063]
Length = 269
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P IY+ D PYG +K+ + + ++D+
Sbjct: 6 IGIFDSGLGGLTVARSIIDQLPGESVIYIGDTANSPYGTKPVERVKELSLSVMDKLVDRG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAV-PAIKQAAAYTQSGLISILSTPATL 132
+L VIACNTA RS + + L + PA+ +A + T++G I +++T T+
Sbjct: 66 VKML-VIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIATHTTI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191
+H+Y Q + + VE GI + + E ++E
Sbjct: 125 ETETYQRALHAY-QQVQVSAKACPAFVDFVER---GITSGPELLAVARE--YLEPIRDAG 178
Query: 192 TDVIVLACTHYPLI 205
D +VL CTHYPL+
Sbjct: 179 VDTLVLGCTHYPLL 192
>gi|290962603|ref|YP_003493785.1| glutamate racemase [Streptomyces scabiei 87.22]
gi|260652129|emb|CBG75261.1| putative glutamate racemase [Streptomyces scabiei 87.22]
Length = 268
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 78/196 (39%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D G P+G L +R + + +
Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLVISSDPDGMPWGPRTPQDLTERALAVATAAAAHA 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L ++ CNTA LR+ P + +G VPAIK AA + G +I +TPAT
Sbjct: 63 PDAL-IVGCNTASVHALPALRALLEPGLPVIGTVPAIKPAA--SGGGPFTIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE + +
Sbjct: 120 PYQRGLIEEFAGGVAVTEVPCWGLAEAVEHADDAAIDAAIAAAAALTPADV-------TT 172
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 173 VVLGCTHYELVAERIR 188
>gi|317504610|ref|ZP_07962579.1| glutamate racemase [Prevotella salivae DSM 15606]
gi|315664281|gb|EFV03979.1| glutamate racemase [Prevotella salivae DSM 15606]
Length = 278
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + ++ +M LF
Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQAVMKLFE-- 68
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
L + L ++ CNTA ++ +++L + PS LG + P + TQ+ + +
Sbjct: 69 LGCH---LVILGCNTASAKALRSIQQNDLPNITPSRRVLGVIRPTAEVIGTLTQNNHVGL 125
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T++ I + + V+ VE + +KK I+
Sbjct: 126 LATEGTVKSHSYELEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRIDDLM- 184
Query: 186 EKEGKRTDVIVLACTHYPLIV 206
+ D I+L CTHYP+++
Sbjct: 185 -RRDPAIDTIILGCTHYPILM 204
>gi|182416025|ref|YP_001821091.1| glutamate racemase [Opitutus terrae PB90-1]
gi|177843239|gb|ACB77491.1| glutamate racemase [Opitutus terrae PB90-1]
Length = 285
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 25/249 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL + +P Y ++++AD PYG + + + + D+
Sbjct: 2 IGVFDSGFGGLTVLASLLKTLPRYDYLFLADSARAPYGARSADVINEFTLEAVEWLFDQG 61
Query: 76 QPVLSVIACNTAFTLIKDEL------------------RSTFPSMAFL--GAVPAIKQAA 115
P L V+ACNTA L R + ++A L GA+P + A
Sbjct: 62 CP-LVVLACNTASARALRNLQQLHLPAHRPDRRVLGVVRPSVEALAGLPPGAIPG--ETA 118
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+G +++L T +T+ + + + + VE E
Sbjct: 119 PSLATGTVAVLGTASTIASDSYAIELQKLAPGLTLIQQPCPMWVPLVEAGELDGPGAEYF 178
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
+++ +E ++L CTHYPL++ R+L P V+ LD + +A R L
Sbjct: 179 LRRSLEPVL--NRAPLPQRLLLGCTHYPLLLPAIRRLVPASVEILDQGEIVATRLADWLQ 236
Query: 236 RINTHQTRV 244
R H+ R+
Sbjct: 237 RHRDHEARL 245
>gi|254671042|emb|CBA07884.1| Glutamate racemase [Neisseria meningitidis alpha153]
gi|325132881|gb|EGC55559.1| glutamate racemase [Neisseria meningitidis M6190]
Length = 327
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 122
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 183 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 238
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 239 IDTLVLGCTHFPLL 252
>gi|297250774|ref|ZP_06865032.2| glutamate racemase [Neisseria polysaccharea ATCC 43768]
gi|296837995|gb|EFH21933.1| glutamate racemase [Neisseria polysaccharea ATCC 43768]
Length = 327
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 122
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 183 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 238
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 239 IDTLVLGCTHFPLL 252
>gi|154491820|ref|ZP_02031446.1| hypothetical protein PARMER_01441 [Parabacteroides merdae ATCC
43184]
gi|154088061|gb|EDN87106.1| hypothetical protein PARMER_01441 [Parabacteroides merdae ATCC
43184]
Length = 278
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 17/222 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I IFDSG GGL + K+R MP Y +IY+ D+ PYG + K+ + LF++
Sbjct: 9 IGIFDSGYGGLTIFDKIRAAMPGYDYIYLGDNARSPYGTRSFEVVYRFTKQAVETLFNEG 68
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
L ++ACNTA T+ + +L P+ LG + P ++ ++S + I
Sbjct: 69 CQ-----LVILACNTASAKALRTIQQRDLPQWDPARRVLGVIRPTVELMDKISKSKHVGI 123
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L T T+ S I + + + VE + ++K +E I
Sbjct: 124 LGTTGTITSDSYSLEIKKMFPHMTVTGEACPMWVPLVENNEFDSPGADYFVRKHLE--HI 181
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTHYPL++ + P + + +A
Sbjct: 182 LAADPEIDTLVLGCTHYPLLIEKIKAFLPEGITLFSQGEYVA 223
>gi|329770518|ref|ZP_08261896.1| glutamate racemase [Gemella sanguinis M325]
gi|328836267|gb|EGF85936.1| glutamate racemase [Gemella sanguinis M325]
Length = 264
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 19/266 (7%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N+I +FDSG+GGL V +++ +P Y D PYG+ KK + + ++
Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDK-----KKDEIIINTEK 55
Query: 72 LDKY---QPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
KY Q V + ++ACNTA + L+ + + +G V P ++A T++ + +L
Sbjct: 56 AIKYLINQGVKMIILACNTATAAALEYLQEKY-DLPIIGVVQPGARRAIQATENNKVLVL 114
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T I + S ++ + +E K + D+I KE I+
Sbjct: 115 GTKFTTTSEVYDIEIQNINSDIVVYDKACPSFVPFIESEGYLNKEEADDIIKETLNDTID 174
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D +VL CTHYP++ + + + + AR +L HQ++V
Sbjct: 175 ---LGMDTVVLGCTHYPMLKKNIEEFYGNQIKVISSGREAAREVSTVLGYSKLHQSKVNK 231
Query: 247 -DHALFLSGKP----DIAMRRLMQGF 267
+H F+S K +IA + L Q
Sbjct: 232 TEHKFFISAKSENFDNIASKWLKQNI 257
>gi|294670141|ref|ZP_06735066.1| glutamate racemase [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291308068|gb|EFE49311.1| glutamate racemase [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 270
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + +Y D PYG ++ + +L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPLENIVYFGDTARVPYGVKSRATIETFTAQIVGFML 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ L VIACNT + ++R +M L + A QAA A T++ I +++T T
Sbjct: 66 EHDVKAL-VIACNTIAAVAGHKVRQMAGNMPVLDVISAGAQAALATTRNNHIGVIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + + + VEE ++ ++ ++ E
Sbjct: 125 VNSNAYAREIHRRNPAARVQSQACPLFVPLVEEGWLDHEVTRLTAREYLKPLLAED---- 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
D +VL CTHYPL+ + +Q +P
Sbjct: 181 VDTLVLGCTHYPLLKPLLQQEAP 203
>gi|116512125|ref|YP_809341.1| glutamate racemase [Lactococcus lactis subsp. cremoris SK11]
gi|123025382|sp|Q02YQ3|MURI_LACLS RecName: Full=Glutamate racemase
gi|116107779|gb|ABJ72919.1| glutamate racemase [Lactococcus lactis subsp. cremoris SK11]
Length = 271
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 24/249 (9%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V +++ +P +Y+ D PYG +
Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ + +L K ++ V+ACNTA ++K+EL + GA AI++ T
Sbjct: 53 FTWDMVNFLLSKNVKMI-VMACNTATAMTLEIVKEELDIPVIGVILPGASSAIQK----T 107
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ I +++T A++R I S + ++ S VE E EI K
Sbjct: 108 KTNKIGVIATQASIRSDEYHKTIARKSSAIEVLSLACPKFVSIVESNEM-----ESEIAK 162
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--R 236
+ + + D ++L CTHYPL+ + ++ V +D+ R LL
Sbjct: 163 RVVSESLAPLVGKIDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLLNYFE 222
Query: 237 INTHQTRVF 245
IN H+ + +
Sbjct: 223 INAHERKEY 231
>gi|269214987|ref|ZP_05987513.2| glutamate racemase [Neisseria lactamica ATCC 23970]
gi|269208607|gb|EEZ75062.1| glutamate racemase [Neisseria lactamica ATCC 23970]
Length = 326
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 121
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 122 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 182 VNSNAYARAIHRSNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 237
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 238 IDTLVLGCTHFPLL 251
>gi|108804439|ref|YP_644376.1| glutamate racemase [Rubrobacter xylanophilus DSM 9941]
gi|108765682|gb|ABG04564.1| glutamate racemase [Rubrobacter xylanophilus DSM 9941]
Length = 281
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 7/198 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL ++R +P H IY D PYG D A + + L
Sbjct: 7 IGVFDSGVGGLTVLAEIRDRLPYEHTIYFGDTARVPYG-VRDLAEVRWFAYEIIRYLVSL 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNTA + +F + +G + P + A T++ + +L+TPAT+
Sbjct: 66 NVKLVVIACNTATAAALMTAQRSF-DVPIIGVIEPGARAAVLETRNRRVGVLATPATVES 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ I + ++ ++ +E GI E++ + + DV
Sbjct: 125 GAYAKAISYLDAGIEVYEQAAPEFVPLIER---GIT-SGPELEAAARRYLAPLQERGADV 180
Query: 195 IVLACTHYPLIVHVFRQL 212
++L CTHYPLI ++
Sbjct: 181 VILGCTHYPLISETINRI 198
>gi|304386743|ref|ZP_07369012.1| glutamate racemase [Neisseria meningitidis ATCC 13091]
gi|304339178|gb|EFM05263.1| glutamate racemase [Neisseria meningitidis ATCC 13091]
Length = 327
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 122
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 183 VNSNAYARAIHRSNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 238
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 239 IDTLVLGCTHFPLL 252
>gi|169628573|ref|YP_001702222.1| glutamate racemase [Mycobacterium abscessus ATCC 19977]
gi|169240540|emb|CAM61568.1| Probable glutamate racemase MurI [Mycobacterium abscessus]
Length = 282
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++ +
Sbjct: 6 IGIFDSGVGGLTVARAIIDQLPDEDILYVGDTGNGPYGPLTIPEIRTHALTIGDDLVGRG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNTA + R + + + V PA+++A T + I ++ T AT+
Sbjct: 66 VKAL-VIACNTASAACLRDARERYAPVPVIEVVLPAVRRAVHTTHNNKIGVIGTEATI-- 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
S + ++++ V+ GI ++ + EG + + D
Sbjct: 123 --ASGAYQDAFAAARDTEITAVACPRFVDFVERGITSGR-QVLQLAEGYLEPLQRAQVDT 179
Query: 195 IVLACTHYPLI 205
+VL CTHYPL+
Sbjct: 180 VVLGCTHYPLL 190
>gi|325128817|gb|EGC51677.1| glutamate racemase [Neisseria meningitidis N1568]
Length = 255
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|302549431|ref|ZP_07301773.1| glutamate racemase [Streptomyces viridochromogenes DSM 40736]
gi|302467049|gb|EFL30142.1| glutamate racemase [Streptomyces viridochromogenes DSM 40736]
Length = 283
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 78/196 (39%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + D G P+G L +R + + +
Sbjct: 3 IALMDSGIGLLAATTAVRRLRPDADLVLSLDPDGMPWGPRTPENLTERALAVAEAAAARR 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L ++ CNTA LR+ F P + +G VPAIK AAA G +I +TPAT
Sbjct: 63 PDAL-IVGCNTATVHALTALRARFEPDLPVIGTVPAIKPAAA--GGGHFAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
TY LI + + V LA VE +
Sbjct: 120 TYQRTLIRDFADGVPVTEVPCWGLAEAVEHADEAAIAAAVAAAAAL-------TPDEVTT 172
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 173 VVLGCTHYELVAERIR 188
>gi|224282549|ref|ZP_03645871.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171]
gi|310287011|ref|YP_003938269.1| glutamate racemase [Bifidobacterium bifidum S17]
gi|311063884|ref|YP_003970609.1| glutamate racemase MurI [Bifidobacterium bifidum PRL2010]
gi|313139703|ref|ZP_07801896.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171]
gi|309250947|gb|ADO52695.1| glutamate racemase [Bifidobacterium bifidum S17]
gi|310866203|gb|ADP35572.1| MurI Glutamate racemase [Bifidobacterium bifidum PRL2010]
gi|313132213|gb|EFR49830.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171]
Length = 269
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 24/229 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V++++ MP +Y D PYG + +RL F DI++++
Sbjct: 7 IGVFDSGLGGISVVRQIVQDMPHERVLYFGDSANAPYGTKTPQEV-RRLSF---DIMERF 62
Query: 76 --QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSG--------- 121
Q V + VIACNTA + + LR + + +G PA+K A T +G
Sbjct: 63 MSQGVKAVVIACNTATSAAVNALRDHY-DIPIIGMEPALKVACDRGDTAAGDGPAPARHM 121
Query: 122 --LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + +TP TLR + L+ + + +++S VE G D + +
Sbjct: 122 PQHVIVAATPLTLREHKFAALMDRFKAN---NMISPQPCPDLVEIVESGRLCDHDLVMRT 178
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ F + D +VL CTH+ FR+L P +D + R
Sbjct: 179 LHRYFDGYDLPSIDSVVLGCTHFVFYRDYFRELLPSTTAIIDGNRGTVR 227
>gi|197103587|ref|YP_002128964.1| glutamate racemase [Phenylobacterium zucineum HLK1]
gi|229486245|sp|B4RCD6|MURI_PHEZH RecName: Full=Glutamate racemase
gi|196477007|gb|ACG76535.1| glutamate racemase [Phenylobacterium zucineum HLK1]
Length = 283
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 94/230 (40%), Gaps = 40/230 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70
+I +FDSG+GGL V ++ P+ F+Y+AD PYG + K + LF
Sbjct: 2 AIGVFDSGVGGLTVHHRLVERFPDADFVYLADQANAPYGGRPGEEIVELTKAGCIRLFEA 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDEL---------RSTFPSMAFLG-AVPAIKQAAA---- 116
D L V+ACNTA ++ L R T ++ LG VP I+ A
Sbjct: 62 GCD-----LVVLACNTAASVALRRLQQTWLPGYRRETGRALNVLGIVVPTIEAATGLPWE 116
Query: 117 ---------YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167
+ ++ + STPAT R I + LA +E A
Sbjct: 117 HEAERRGEKVEKLDILGVFSTPATARSRVYEIEIDKRRQDVAVFSEPCPELARMIEAGA- 175
Query: 168 GIKIKEDEIKKEIEG---CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+E+K IEG + G+ D +L CTHY ++ +FR+ P
Sbjct: 176 ----PREELKAVIEGHVQALRTRIGRAPDRAILGCTHYEIVADLFREALP 221
>gi|227502996|ref|ZP_03933045.1| glutamate racemase [Corynebacterium accolens ATCC 49725]
gi|227076057|gb|EEI14020.1| glutamate racemase [Corynebacterium accolens ATCC 49725]
Length = 259
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P+ IY D PYG ++ + ++++
Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPQESVIYKGDTAHGPYGPRPISQVRAFSQDIADELVE 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ +L VIACNTA + R + + L + PA+++A + T++G I ++ T T+
Sbjct: 66 RGCKML-VIACNTATAAFLHDARERY-DIPILEVIRPAVRRAMSTTRNGKIGVIGTEGTI 123
Query: 133 RRTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +L + + + C + V I A R +I EG
Sbjct: 124 KSGAYQDLFAVNPNVEAVAAACPDFVPFVERGITAGR-------------QILGVAEGYL 170
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + D +VL CTHYPL+ + V + +S+ + LL
Sbjct: 171 APLQAQGVDTLVLGCTHYPLLTGTIQLAMGENVSLVTSSEETTKDVMRLL 220
>gi|327399664|ref|YP_004340533.1| glutamate racemase [Hippea maritima DSM 10411]
gi|327182293|gb|AEA34474.1| Glutamate racemase [Hippea maritima DSM 10411]
Length = 254
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYH--FIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL V+++ L+ ++ IY+ D PYG + K ++ L
Sbjct: 7 IGVFDSGVGGLSVVKQ---LLKAFNSDIIYLGDTARLPYGTKSKETVLK-YSIQNAEFLM 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ V+ACNTA ++ D L+ F F PA K AA + + + ++ T +T++
Sbjct: 63 RFNVDAIVVACNTASSVAIDVLKKKFNLPVFGVIEPAAKLAAKFEK---VCVIGTTSTIQ 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I Y C + + + VEE D+I E+ ++ D
Sbjct: 120 SNAYPKKIAKYNKGCRVTQRACPLFVPLVEE-----GWIYDDITYEVAKRYLYD--LECD 172
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++L CTHYPL+ + +++ V +D+ +++ +
Sbjct: 173 ALILGCTHYPLLREIIQRVMGVGVSLIDSGEALVK 207
>gi|269955858|ref|YP_003325647.1| glutamate racemase [Xylanimonas cellulosilytica DSM 15894]
gi|269304539|gb|ACZ30089.1| glutamate racemase [Xylanimonas cellulosilytica DSM 15894]
Length = 268
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 36/230 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P +Y+ D PYG A++ + + D++D+
Sbjct: 6 IGVFDSGVGGLTVARAILDQLPHEQVLYIGDTANAPYGPKPLAAVRAMALAVMDDLVDQG 65
Query: 76 QPVLSVIACNTAFTLI------KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L VIACN+A + + E+R P + + PA ++A ++SG I ++ T
Sbjct: 66 VKLL-VIACNSATAVALPDARERYEVRRGIPVVEVI--RPAARRAVVTSRSGRIGVIGTK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEK 187
AT I S + H+ +I+ ++ AC + + E I G I
Sbjct: 123 AT---------IDSRAYEDAFHVTPGLIITTQ----ACPEFVPLVERGITS---GPEILA 166
Query: 188 EGKR---------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
R D +VL CTHYPL+ + V + +++ A+
Sbjct: 167 AAHRYLDPVRDAGVDTLVLGCTHYPLLAGAISYVMGEDVTLVSSAEETAK 216
>gi|254479197|ref|ZP_05092544.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
gi|214034860|gb|EEB75587.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
Length = 264
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 34/252 (13%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I +FDSG+GGL VL+++ ++PE +IY D PYG+ K+ + I++
Sbjct: 6 IGVFDSGVGGLTVLKRLIQVLPEEDYIYFGDTKRVPYGDRS----KEEIELFAGQIINFM 61
Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPAT 131
K + V + VIACNT I + + + + A ++ Y T++ + +++T T
Sbjct: 62 KEKNVKAVVIACNTTCATID---KGKY-DIELFDVLKAGAESGVYCTKNKKVGVIATKRT 117
Query: 132 LR-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ R+Y N+ I Y C + L+ + S + Y+ E
Sbjct: 118 VESRSYEINIKSINPQIEVYQKACPEFVPLIEKGLYNSPL-AYSVA------------EK 164
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
C + + K D ++L CTHYPL+ + +++ V+ +D + +A + L + N +
Sbjct: 165 CLKDLKAKEIDTLILGCTHYPLMEGIIKEIMGDGVEVVDPAIRLAFEVKKYLEKNNILNS 224
Query: 243 RVFDDHALFLSG 254
F+SG
Sbjct: 225 GPKGKIEFFVSG 236
>gi|260592030|ref|ZP_05857488.1| glutamate racemase [Prevotella veroralis F0319]
gi|260536314|gb|EEX18931.1| glutamate racemase [Prevotella veroralis F0319]
Length = 279
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 17/231 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + ++ +M LF
Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVMKLFESG 70
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
L ++ CNTA ++ +++L P LG + P + T+S + +
Sbjct: 71 CQ-----LVILGCNTASAKALRSIQQNDLPKLDPQRRVLGVIRPTAEVIGKLTRSHHVGL 125
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T++ + I + V+ + +E + +KK I+ I
Sbjct: 126 LATEGTVKSQSYNIEIQKLWPDVKVTGVACPLWVPIIENNEADSPGADYFVKKRID--HI 183
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D ++L CTHYP+++ + P V + + +A + L R
Sbjct: 184 MRIDPEIDTLILGCTHYPILMPKIIKYVPRGVRIVPQGEYVAESLQDYLRR 234
>gi|121635399|ref|YP_975644.1| glutamate racemase [Neisseria meningitidis FAM18]
gi|20177991|sp|Q9RMM3|MURI_NEIMC RecName: Full=Glutamate racemase
gi|166231045|sp|A1KVG8|MURI_NEIMF RecName: Full=Glutamate racemase
gi|6449085|gb|AAF08814.1|AF194079_1 MurI [Neisseria meningitidis]
gi|120867105|emb|CAM10872.1| glutamate racemase [Neisseria meningitidis FAM18]
gi|261391971|emb|CAX49435.1| glutamate racemase [Neisseria meningitidis 8013]
gi|325142940|gb|EGC65299.1| glutamate racemase [Neisseria meningitidis 961-5945]
gi|325205523|gb|ADZ00976.1| glutamate racemase [Neisseria meningitidis M04-240196]
Length = 270
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|317508768|ref|ZP_07966418.1| Asp/Glu/Hydantoin racemase [Segniliparus rugosus ATCC BAA-974]
gi|316252931|gb|EFV12351.1| Asp/Glu/Hydantoin racemase [Segniliparus rugosus ATCC BAA-974]
Length = 287
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GGL V + + L+P YVAD PYG ++K + +
Sbjct: 5 KSEAPIGVFDSGVGGLTVARAIAELLPNEEMRYVADSAHQPYGPQSVAQVRKHALAVLDS 64
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++++ +L VIACN+A + R +P +PA++ A A T++G I ++ T
Sbjct: 65 LVEEGVKML-VIACNSASVACLADARERYPVPVVEVVLPAVRSALAATRTGRIGVIGTRI 123
Query: 131 TL-RRTYTSNLIHSYVSQCHIHLVSS------------MILASRVEEYACGIKIKEDEIK 177
T+ R Y + H +VS+ ++ R+E A E
Sbjct: 124 TIASRAYEDSF---AAVAPHTRIVSAPCPQFVDFIERGVVSGPRLEALA-------REYL 173
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+E + DV+VL CTHYPL+ + ++ V + S+ A+
Sbjct: 174 APLEAADV-------DVLVLGCTHYPLLAELIGEVMGPGVRLVSPSEETAK 217
>gi|257459967|ref|ZP_05625071.1| glutamate racemase [Campylobacter gracilis RM3268]
gi|257442408|gb|EEV17547.1| glutamate racemase [Campylobacter gracilis RM3268]
Length = 400
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 16/218 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK----RLMFLFSDI 71
I FDSGIGGL VL + F+Y AD+ PYG + + + FL S
Sbjct: 3 IAFFDSGIGGLSVLAEALQRFSGAEFLYFADEDHVPYGTKSRAEIVRLSLDAVGFLVSRG 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
D V+ACNTA + ELR F S+ +G PA+K AA + +++TP T
Sbjct: 63 ADGV-----VVACNTATSAAISELRGAF-SVPVIGMEPAVKLAADSFGARPTLLIATPLT 116
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + L+ +C S+ L R+ E+A ++ ++ + + E R
Sbjct: 117 ISGEKLARLVGRL--ECETW---SLAL-PRLVEFAQDLEFDSPAVRAYLSEELAKFELAR 170
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+VL CTH+ V R++ P V +D D R
Sbjct: 171 LGSLVLGCTHFNYFKDVLREILPPHVRIIDGIDGTLNR 208
>gi|213861499|ref|ZP_03385969.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 84
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 2 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 60
Query: 133 RRTYTSNLIHSYVSQCHIHLVSS 155
+R+YT LI + ++C I ++ S
Sbjct: 61 KRSYTHELIARFANECQIEMLGS 83
>gi|15676369|ref|NP_273505.1| glutamate racemase [Neisseria meningitidis MC58]
gi|218768777|ref|YP_002343289.1| glutamate racemase [Neisseria meningitidis Z2491]
gi|60392794|sp|P0A0Q9|MURI_NEIMA RecName: Full=Glutamate racemase
gi|60392795|sp|P0A0R0|MURI_NEIMB RecName: Full=Glutamate racemase
gi|6274531|gb|AAF06679.1|AF163663_4 putative glutamate racemase MurI [Neisseria meningitidis]
gi|7225684|gb|AAF40895.1| glutamate racemase [Neisseria meningitidis MC58]
gi|121052785|emb|CAM09131.1| glutamate racemase [Neisseria meningitidis Z2491]
gi|254672785|emb|CBA06865.1| Glutamate racemase [Neisseria meningitidis alpha275]
gi|316985801|gb|EFV64744.1| glutamate racemase [Neisseria meningitidis H44/76]
gi|319411017|emb|CBY91415.1| glutamate racemase [Neisseria meningitidis WUE 2594]
gi|325136845|gb|EGC59443.1| glutamate racemase [Neisseria meningitidis M0579]
gi|325140970|gb|EGC63477.1| glutamate racemase [Neisseria meningitidis CU385]
gi|325199643|gb|ADY95098.1| glutamate racemase [Neisseria meningitidis H44/76]
Length = 270
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|325208730|gb|ADZ04182.1| glutamate racemase [Neisseria meningitidis NZ-05/33]
Length = 270
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|320534621|ref|ZP_08035066.1| glutamate racemase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320133141|gb|EFW25644.1| glutamate racemase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 287
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 12/216 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++D+
Sbjct: 1 MFDSGVGGLTVARSVLDQLPHEQVLYIGDTANGPYGPRDIAEVRSLALSIMDELVDRGVK 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPATL- 132
+L VIACNTA + + R + + + PA + AA T++G + +++T T+
Sbjct: 61 LL-VIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGTVD 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R Y L + + LVS R E A E+ E +
Sbjct: 120 SRAYDDAL----QAVPGVELVSQAC--PRFVELAERGVTTGPEVLDVAEEYLAPIKAAGV 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYPL+V + V + +SD A+
Sbjct: 174 DTLILGCTHYPLLVGPISYVMGEDVALVTSSDETAK 209
>gi|50955005|ref|YP_062293.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|71648716|sp|Q6AEK8|MURI_LEIXX RecName: Full=Glutamate racemase
gi|50951487|gb|AAT89188.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 272
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 8/191 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + +R +P +YV D PYG + A +R D+L +
Sbjct: 6 IGIFDSGVGGLTVARAIRDQLPNESILYVGDTTHSPYGP-KPIADVRRYSLEVLDLLVEQ 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134
L VIACNTA + + + R + PA+++A A T++G + ++ T T+ R
Sbjct: 65 GVKLLVIACNTASSAVLRDARERYAVPVVEVIQPAVRRAVAATRTGRVGVIGTVGTIASR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++ + + L R E+ DE+ + D
Sbjct: 125 AYED----AFAAAPDLRLFPRA--CPRFVEFVETGVTSGDEVLRVAAEYLQPLRDADVDT 178
Query: 195 IVLACTHYPLI 205
+VL CTHYP +
Sbjct: 179 LVLGCTHYPFL 189
>gi|315655639|ref|ZP_07908537.1| glutamate racemase [Mobiluncus curtisii ATCC 51333]
gi|315489703|gb|EFU79330.1| glutamate racemase [Mobiluncus curtisii ATCC 51333]
Length = 271
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ++N P I IFDSG+GGL V + + +P IY+ D PYG +
Sbjct: 1 MIVNNAP--------IGIFDSGLGGLTVARSIIDQLPGESVIYIGDTANSPYGTKPVERV 52
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAV-PAIKQAAAY 117
K+ + + ++D+ +L VIACNTA RS + + L + PA+ +A +
Sbjct: 53 KELSLSVMDKLVDRGVKML-VIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSA 111
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T++G I +++T T+ +H+Y Q + + VE GI + +
Sbjct: 112 TRNGHIGVIATHTTIETETYQRALHAY-QQVQVSAKACPAFVDFVER---GITSGPELLA 167
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209
E ++ D +VL CTHYPL+ V
Sbjct: 168 VAREYLDPIRDAG-VDTLVLGCTHYPLLSGVI 198
>gi|308388659|gb|ADO30979.1| glutamate racemase [Neisseria meningitidis alpha710]
Length = 270
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|319937290|ref|ZP_08011697.1| glutamate racemase [Coprobacillus sp. 29_1]
gi|319807656|gb|EFW04249.1| glutamate racemase [Coprobacillus sp. 29_1]
Length = 260
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 120/263 (45%), Gaps = 23/263 (8%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL VL ++ +P + IY+ D+ PYG+ H +L+ +I
Sbjct: 1 MDKPIGIFDSGVGGLTVLTALQKELPHENMIYIGDNAHCPYGDKTKH----QLLSYTKEI 56
Query: 72 LDKY--QPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D + Q V + V+ACNT + EL+ + + +G + + + I++T
Sbjct: 57 CDYFISQNVKMIVLACNTTSANVLAELQELY-QVPVVGVIHSTVHDFLTRKKKCPLIIAT 115
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIE 186
AT+ +I Y I + + L +E +Y GI +++ +
Sbjct: 116 HATIESHKYREIIMHYEPDIQIFELETPALVPLIESGQYKKGI--------QDVLEHYFY 167
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYP+++ +++ P +++ +S+SI + L R++ D
Sbjct: 168 PYVNKVDSLILGCTHYPIVLEQIKEVFPNK-EYISSSESICQEVASYL-RVHHILNESND 225
Query: 247 DHA--LFLSGKPDIAMRRLMQGF 267
A ++ +G P R +GF
Sbjct: 226 SGATVIYTTGDPH-EFRYSSEGF 247
>gi|307298986|ref|ZP_07578788.1| glutamate racemase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306915411|gb|EFN45796.1| glutamate racemase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 273
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 21/246 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPE-YHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL VL+++ +PE F Y AD PYG+ L++ + +F D+
Sbjct: 7 IGVFDSGIGGLTVLKRLVETLPEGVSFHYFADTARVPYGSKPVETLRRYVREIF-DLFAH 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPATLR 133
V ACNT+ +++ ++ F P +++ + + ++I++T T++
Sbjct: 66 LNVDAIVTACNTSDSILTQSDKAELGVPYFSIIDPTVRRIGESAPGNSTVAIIATENTVK 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEKEGKR 191
++ + Y S I + + +EE GI E D I K F E E
Sbjct: 126 KSLYLRKLFRYESFSKIVQKACPLFVPLIEE---GIWEGEIVDSIVKYYLNDFAEIE--- 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR----ARCLLPRINT------HQ 241
D ++L CTHYP I + + P +D S+ I R A L P +T
Sbjct: 180 PDFMILGCTHYPFIKNSIERFLPSKTKVVDPSEYIVRDVADWATILSPEPSTVDYYVSGN 239
Query: 242 TRVFDD 247
TR+F D
Sbjct: 240 TRIFQD 245
>gi|325138826|gb|EGC61377.1| glutamate racemase [Neisseria meningitidis ES14902]
Length = 270
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|116872608|ref|YP_849389.1| glutamate racemase [Listeria welshimeri serovar 6b str. SLCC5334]
gi|123466205|sp|A0AHX8|MURI_LISW6 RecName: Full=Glutamate racemase
gi|116741486|emb|CAK20610.1| glutamate racemase [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 266
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ +L VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATKNNKIGVLGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + ++ S VE EY I KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238
+ D ++L CTHYPL+ + V +++ + A LL N
Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDGVSVINSGEETASEVSALLDYHNLLDATDEEIE 232
Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266
T T++F D A PD+ + + G
Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMIVEHIKLG 265
>gi|315656446|ref|ZP_07909335.1| glutamate racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|315493005|gb|EFU82607.1| glutamate racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 271
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 50/292 (17%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ++N P I IFDSG+GGL V + + +P Y+ D PYG +
Sbjct: 1 MIVNNAP--------IGIFDSGLGGLTVARSIIDQLPGESVTYIGDTANSPYGTKPVERV 52
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAV-PAIKQAAAY 117
K+ + + ++D+ +L VIACNTA RS + + L + PA+ +A +
Sbjct: 53 KELSLSVMDKLVDRGVKML-VIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSA 111
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T++G I +++T T+ +H+Y Q + + VE GI + +
Sbjct: 112 TRNGHIGVIATHTTIETETYQRALHAY-QQVQVSAKACPAFVDFVER---GITSGPELLA 167
Query: 178 KEIEGCFIEK-EGKRTDVIVLACTHYPLIV----------------------HVFRQLSP 214
E ++E D +VL CTHYPL+ V+RQL
Sbjct: 168 VARE--YLEPIRDAGVDTLVLGCTHYPLLSGIISYVMGPEVTLVSSAEETAHDVYRQL-- 223
Query: 215 WPVDWLDNSDSIARRARCLLPR---INTHQTRVFDDHALFLSGKPDIAMRRL 263
DWL+ D A + PR + T T+ F A G A+ R+
Sbjct: 224 LDKDWLNTDDG----ADTVNPRYQFLATGDTQTFTRLARRFLGPEVTAVERV 271
>gi|305680741|ref|ZP_07403548.1| glutamate racemase [Corynebacterium matruchotii ATCC 14266]
gi|305658946|gb|EFM48446.1| glutamate racemase [Corynebacterium matruchotii ATCC 14266]
Length = 288
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKI N + I IFDSG+GGL V + + +P Y+ D PYG +
Sbjct: 21 MKITN-------NSPIGIFDSGVGGLTVARTIMEQLPGESITYIGDTAHSPYGPLPIAEV 73
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K + + +++++ +L VIACNTA + R + PA+++A A T++
Sbjct: 74 RKHALRIADELVERGSKML-VIACNTASAACLRDARERYDVPVIEVIHPAVRRAVATTRN 132
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G I ++ T T+ +L S I + VE GI + +
Sbjct: 133 GRIGVIGTSGTINSGAYQDLF-SVNPNVEITAQACPRFVDFVER---GITSGRQILG--V 186
Query: 181 EGCFIEK-EGKRTDVIVLACTHYPLIVHVFR 210
+IE + D +VL CTHYPL+ V +
Sbjct: 187 AQAYIEPLQTAGVDTLVLGCTHYPLLSGVIQ 217
>gi|227529708|ref|ZP_03959757.1| glutamate racemase [Lactobacillus vaginalis ATCC 49540]
gi|227350374|gb|EEJ40665.1| glutamate racemase [Lactobacillus vaginalis ATCC 49540]
Length = 266
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 30/240 (12%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V++ ++ +P ++V D+ FPYG + L +
Sbjct: 1 MDNRP--------IGVMDSGLGGLSVIRVIQQELPNESVVFVGDEGHFPYGT-KSQELIR 51
Query: 63 RLMFLFSDILDKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+L+ L QPV L VIACNTA ++ P + +G + AA +++
Sbjct: 52 QLVLRIGRFL-VAQPVKLMVIACNTATAAALSTVQKELP-IPVIGVINPGATAAIESKAS 109
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQC-----HIHLVSSMI--LASRVEEYACGIKIKED 174
I +++T +T + +YV + H+ ++S L + VE G
Sbjct: 110 RIGVIATESTTKDG-------AYVRELKKLDPHVKVISKATQPLVAIVEHGKTGTA---- 158
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
E +K ++ + + D ++L CTH+P + + Q V +D + + + LL
Sbjct: 159 EAQKTVDQQLASFDQEPVDALILGCTHFPFLANEISQKMGKKVKLIDPALETVNQVKKLL 218
>gi|254805513|ref|YP_003083734.1| glutamate racemase MurI [Neisseria meningitidis alpha14]
gi|254669055|emb|CBA07540.1| glutamate racemase MurI [Neisseria meningitidis alpha14]
Length = 327
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 122
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 183 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 238
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 239 IDTLVLGCTHFPLL 252
>gi|257063632|ref|YP_003143304.1| glutamate racemase [Slackia heliotrinireducens DSM 20476]
gi|256791285|gb|ACV21955.1| glutamate racemase [Slackia heliotrinireducens DSM 20476]
Length = 307
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 30/242 (12%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
DN P I +FDSG GGL +++ LMP +Y D PYG + +
Sbjct: 21 DNAP--------IGVFDSGYGGLTCAREIAELMPNESIVYFGDTARCPYGPRDQAEVDLF 72
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122
+ + + ++DK +L VIACNTA + + TF S+ LGAV P + AA T++
Sbjct: 73 VQQIGAWLMDKGVKML-VIACNTATAAGLEHAQQTF-SVPILGAVEPGARAAARTTKNRK 130
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE---DEIKKE 179
+ ++ T T+ I + + + ++ VE GI++ + +++
Sbjct: 131 VGVIGTKGTIESGCYPRAIRNIDAGITVFSTATPRFVEIVEN---GIRLAKGPFEDLTSS 187
Query: 180 IEGCFIEKEGK-------------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
+ +I E + D +VLACTHYP++ + + V + +++ +
Sbjct: 188 VSKVYIRPEFRTIAIEYLEPLRRCEIDTLVLACTHYPMLKALIGGVIGTNVRLVSSAEEL 247
Query: 227 AR 228
A+
Sbjct: 248 AK 249
>gi|299535537|ref|ZP_07048858.1| glutamate racemase [Lysinibacillus fusiformis ZC1]
gi|298728737|gb|EFI69291.1| glutamate racemase [Lysinibacillus fusiformis ZC1]
Length = 265
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 12/243 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V +++ +P Y+ D PYG ++ + + L+K
Sbjct: 5 IGVIDSGVGGLTVAKEIMKRLPNETIYYIGDTARCPYGPRSRQEVRN-FTWQMAKALEKM 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134
+ VIACNTA + + L+ P LG + A +AA T+ + +L+T T++
Sbjct: 64 NVKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEGTIKS 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ S + HI ++ VE EY K D I + ++
Sbjct: 123 GAYEEALLSLNTSTHIIPLACPTFVPLVESGEY------KGDFANNLIAEGLKPLKNRQF 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
D ++L CTHYP++ + V+ L +++ A+ + +L T H F
Sbjct: 177 DTVILGCTHYPILQKQIEAVVGEDVNVLSSAEETAKDVQEMLAYNGTLANANAVPAHRFF 236
Query: 252 LSG 254
+G
Sbjct: 237 ATG 239
>gi|227504002|ref|ZP_03934051.1| glutamate racemase [Corynebacterium striatum ATCC 6940]
gi|227199396|gb|EEI79444.1| glutamate racemase [Corynebacterium striatum ATCC 6940]
Length = 258
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 10/217 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P IY+ D PYG +++ L +D L
Sbjct: 6 SPIGIFDSGVGGLTVARTIIEQLPNESVIYIGDTEHSPYGPRPIAEVRE-LSTKIADELV 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNTA + R + PA+++A A T++G I ++ T T+
Sbjct: 65 ERGCKMIVIACNTATAAFLHDARERYDIPVVEVIRPAVRRAIATTRNGKIGVIGTEGTVN 124
Query: 134 RTYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+L + H+ H V+ VE GI +I EG +
Sbjct: 125 SGAYQDL---FAVNPHVEAHAVACPDFVGFVER---GITAGR-QILGVAEGYLAPLQSVG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYPL+ V + V + +++ A+
Sbjct: 178 VDTLVLGCTHYPLLTGVIQLAMGDNVTLVSSAEETAK 214
>gi|325134824|gb|EGC57460.1| glutamate racemase [Neisseria meningitidis M13399]
Length = 270
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT ++ ++R +M L + A +AA + T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVVGQKIRQKTGNMPVLDVISAGAKAALSTTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|228957263|ref|ZP_04119029.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228802454|gb|EEM49305.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 265
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 7/238 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA EL+ S+ +G + P + A T+ I ++ T T++
Sbjct: 60 KALVVACNTAAATALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+H + +H + LA+ VE I ++K+ + + D ++
Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENRLEDIAYVTQQVKQ----ALLPLTKEDIDTLI 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 232
>gi|315443407|ref|YP_004076286.1| glutamate racemase [Mycobacterium sp. Spyr1]
gi|315261710|gb|ADT98451.1| glutamate racemase [Mycobacterium sp. Spyr1]
Length = 278
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ IYV D PYG ++ + + D+ +
Sbjct: 9 IGIFDSGVGGLTVARAVIDQLPDEDIIYVGDTGNGPYGPLTIPQIRAHALAIGDDLAGRG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L VIACN+A + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 69 IKAL-VIACNSASSACLRDARERYAPIPVVEVILPAVRRAVAATRNGRIGVIGTAATI-- 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ S+ + I + + R ++ ++ E + + D
Sbjct: 126 -ASGAYQDSFAAARDIEVFG--VACPRFVDFVERGVTSGRQVLGLAEAYLEPLQRAQVDT 182
Query: 195 IVLACTHYPLI 205
+VL CTHYP++
Sbjct: 183 LVLGCTHYPML 193
>gi|120405243|ref|YP_955072.1| glutamate racemase [Mycobacterium vanbaalenii PYR-1]
gi|119958061|gb|ABM15066.1| glutamate racemase [Mycobacterium vanbaalenii PYR-1]
Length = 281
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ IY+ D PYG ++ + + D+ +
Sbjct: 12 IGIFDSGVGGLTVARAVIDQLPDEDIIYIGDTGNGPYGPLTIPEIRAHALAIGDDLAGRG 71
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L VIACN+A + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 72 IKAL-VIACNSASSACLRDARERYAPIPVVEVILPAVRRAVATTRNGRIGVIGTAATI-- 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ ++ + I + + R ++ ++ EG + D
Sbjct: 129 -ASGAYQDTFAAARDIEVFG--VACPRFVDFVERGVTSGRQVLGLAEGYLEPLQRAEVDT 185
Query: 195 IVLACTHYPLI 205
+VL CTHYP++
Sbjct: 186 LVLGCTHYPML 196
>gi|311743615|ref|ZP_07717421.1| glutamate racemase [Aeromicrobium marinum DSM 15272]
gi|311312745|gb|EFQ82656.1| glutamate racemase [Aeromicrobium marinum DSM 15272]
Length = 272
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 8/222 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL V + + +P +Y+ D PYG +++ + ++D
Sbjct: 6 IGIFDSGFGGLTVARAVLDQLPHESVLYLGDTARQPYGPLPISQVREYALDCLDHLVDHG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT-LRR 134
L VIACN+A + + R + VPA ++A T++G + ++ T +T R
Sbjct: 66 VKAL-VIACNSASAAVLRDARERYAVPVVEVIVPATRRAVNATRNGRVGVICTQSTATSR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y + + H VE G+ E+ I E KE D
Sbjct: 125 AYDDAFAANPSIELHTRACPRF-----VEFVEAGVTGGEELITVAREYLAPLKEAG-VDT 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+VL CTHYPL+ V + V + +++ A+ LL R
Sbjct: 179 LVLGCTHYPLLTGVVSYVMGDTVTLVSSAEETAKDVFALLAR 220
>gi|225021576|ref|ZP_03710768.1| hypothetical protein CORMATOL_01597 [Corynebacterium matruchotii
ATCC 33806]
gi|224945567|gb|EEG26776.1| hypothetical protein CORMATOL_01597 [Corynebacterium matruchotii
ATCC 33806]
Length = 288
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKI N + I IFDSG+GGL V + + +P Y+ D PYG +
Sbjct: 21 MKITN-------NSPIGIFDSGVGGLTVARTIMEQLPGESITYIGDTAHSPYGPLPIAEV 73
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K + + +++++ +L VIACNTA + R + PA+++A A T++
Sbjct: 74 RKHALRIADELVERGSKML-VIACNTASAACLRDARERYDVPVIEVIHPAVRRAVATTRN 132
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G I ++ T T+ +L S I + VE GI + +
Sbjct: 133 GRIGVIGTSGTINSGAYQDLF-SVNPNVEITAQACPRFVDFVER---GITSGRQILG--V 186
Query: 181 EGCFIEK-EGKRTDVIVLACTHYPLIVHVFR 210
+IE + D +VL CTHYPL+ V +
Sbjct: 187 AQAYIEPLQTAGVDTLVLGCTHYPLLSGVIQ 217
>gi|16803277|ref|NP_464762.1| glutamate racemase [Listeria monocytogenes EGD-e]
gi|46907456|ref|YP_013845.1| glutamate racemase [Listeria monocytogenes serotype 4b str. F2365]
gi|47097378|ref|ZP_00234930.1| glutamate racemase [Listeria monocytogenes str. 1/2a F6854]
gi|224499092|ref|ZP_03667441.1| glutamate racemase [Listeria monocytogenes Finland 1988]
gi|224503808|ref|ZP_03672115.1| glutamate racemase [Listeria monocytogenes FSL R2-561]
gi|226223837|ref|YP_002757944.1| glutamate racemase [Listeria monocytogenes Clip81459]
gi|254823509|ref|ZP_05228510.1| racE [Listeria monocytogenes FSL J1-194]
gi|254828597|ref|ZP_05233284.1| glutamate racemase [Listeria monocytogenes FSL N3-165]
gi|254830009|ref|ZP_05234664.1| glutamate racemase [Listeria monocytogenes 10403S]
gi|254852894|ref|ZP_05242242.1| racE [Listeria monocytogenes FSL R2-503]
gi|254898602|ref|ZP_05258526.1| glutamate racemase [Listeria monocytogenes J0161]
gi|254932885|ref|ZP_05266244.1| racE [Listeria monocytogenes HPB2262]
gi|254936234|ref|ZP_05267931.1| racE [Listeria monocytogenes F6900]
gi|254993152|ref|ZP_05275342.1| glutamate racemase [Listeria monocytogenes FSL J2-064]
gi|255025221|ref|ZP_05297207.1| glutamate racemase [Listeria monocytogenes FSL J2-003]
gi|255522515|ref|ZP_05389752.1| glutamate racemase [Listeria monocytogenes FSL J1-175]
gi|284801557|ref|YP_003413422.1| hypothetical protein LM5578_1310 [Listeria monocytogenes 08-5578]
gi|284994699|ref|YP_003416467.1| hypothetical protein LM5923_1263 [Listeria monocytogenes 08-5923]
gi|290893281|ref|ZP_06556267.1| racE protein [Listeria monocytogenes FSL J2-071]
gi|300764386|ref|ZP_07074380.1| glutamate racemase [Listeria monocytogenes FSL N1-017]
gi|20177977|sp|Q8Y7N7|MURI_LISMO RecName: Full=Glutamate racemase
gi|67460886|sp|Q720J2|MURI_LISMF RecName: Full=Glutamate racemase
gi|259509916|sp|C1L2E2|MURI_LISMC RecName: Full=Glutamate racemase
gi|16410653|emb|CAC99315.1| racE [Listeria monocytogenes EGD-e]
gi|46880724|gb|AAT04022.1| glutamate racemase [Listeria monocytogenes serotype 4b str. F2365]
gi|47014250|gb|EAL05231.1| glutamate racemase [Listeria monocytogenes str. 1/2a F6854]
gi|225876299|emb|CAS05008.1| Putative glutamate racemase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258600995|gb|EEW14320.1| glutamate racemase [Listeria monocytogenes FSL N3-165]
gi|258606229|gb|EEW18837.1| racE [Listeria monocytogenes FSL R2-503]
gi|258608824|gb|EEW21432.1| racE [Listeria monocytogenes F6900]
gi|284057119|gb|ADB68060.1| hypothetical protein LM5578_1310 [Listeria monocytogenes 08-5578]
gi|284060166|gb|ADB71105.1| hypothetical protein LM5923_1263 [Listeria monocytogenes 08-5923]
gi|290557089|gb|EFD90617.1| racE protein [Listeria monocytogenes FSL J2-071]
gi|293584439|gb|EFF96471.1| racE [Listeria monocytogenes HPB2262]
gi|293592729|gb|EFG00490.1| racE [Listeria monocytogenes FSL J1-194]
gi|300515038|gb|EFK42091.1| glutamate racemase [Listeria monocytogenes FSL N1-017]
gi|313609160|gb|EFR84843.1| glutamate racemase [Listeria monocytogenes FSL F2-208]
gi|328466631|gb|EGF37766.1| glutamate racemase [Listeria monocytogenes 1816]
gi|328475255|gb|EGF46036.1| glutamate racemase [Listeria monocytogenes 220]
gi|332311623|gb|EGJ24718.1| Glutamate racemase [Listeria monocytogenes str. Scott A]
Length = 266
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ +L VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + ++ S VE EY I KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238
+ D ++L CTHYPL+ + V +++ + A LL N
Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIE 232
Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266
T T++F D A PD+ + + G
Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLG 265
>gi|328956948|ref|YP_004374334.1| glutamate racemase [Carnobacterium sp. 17-4]
gi|328673272|gb|AEB29318.1| glutamate racemase [Carnobacterium sp. 17-4]
Length = 272
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V+++ +P YV D PYG + + + + +L
Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEEQILQFTWEMTHFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+K +L VIACNTA + ++L+ ++ +G + P + A T++ I I+ T T
Sbjct: 63 NKDIKML-VIACNTATAVALEDLKKKL-AIPIIGVILPGSRAAIKATKNNRIGIIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEG 189
++ +I S + + ++ VE EY I KK + +
Sbjct: 121 IKSDKYRKMIRSKDTLASVESLACPKFVPLVESNEYDSAIA------KKIVTETLKPIKN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
K D +VL CTHYPL+ + + V +D+ +L N
Sbjct: 175 KNIDTLVLGCTHYPLLRPIIQNFMGDSVTLIDSGAETISEVSTILDYFN 223
>gi|307243173|ref|ZP_07525346.1| glutamate racemase [Peptostreptococcus stomatis DSM 17678]
gi|306493434|gb|EFM65414.1| glutamate racemase [Peptostreptococcus stomatis DSM 17678]
Length = 270
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 15/224 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL VL+++ +P IY D PYG+ + K F + L
Sbjct: 5 AIGVFDSGLGGLTVLKEINKYLPNEDTIYFGDTARVPYGSRSKETIIK-YTFQAINFLAS 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATLR 133
VIACNTA E R + + +G + A + A Y T++ ++ ++ T AT+R
Sbjct: 64 QNVKAIVIACNTASARALLEAREEY-DIPIMGVIEAGARTAVYSTRNKVVGVIGTTATVR 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I + S + + I VEE +I ++ +E K D
Sbjct: 123 SKAYNKAIKAKDSGIRVIGKACPIFVPLVEEGWSNKEISTMAAHMYLD-SLVE---KGID 178
Query: 194 VIVLACTHYPLIVHVFRQ--------LSPWPVDWLDNSDSIARR 229
+VL CTHYP++ + ++P LD D + +R
Sbjct: 179 SLVLGCTHYPILKRTIGEVVGKDVKLINPAKETALDLKDVLEKR 222
>gi|320012326|gb|ADW07176.1| Glutamate racemase [Streptomyces flavogriseus ATCC 33331]
Length = 279
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + +R + + +
Sbjct: 19 IALMDSGIGLLAAAAAVRRLRPDADLVLSSDPGSMPWGPRTPEDVTRRALAVAQ-AAAAH 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ P + +G VPAIK AAA G +I +TPAT
Sbjct: 78 RPDALIVACNTASVHALPTLRAELEPGLPVIGTVPAIKPAAA--GGGPFAIWATPATTGS 135
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI+ + + V LA VE E I + + TDV
Sbjct: 136 PYQRGLINDFARAVDVTEVPCPGLADAVEHA------DEQGIDRAVAAAAALTPPDVTDV 189
Query: 195 IVLACTHYPLIVHVFR 210
VL CTHY L+ R
Sbjct: 190 -VLGCTHYELVAERIR 204
>gi|116327584|ref|YP_797304.1| glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116331805|ref|YP_801523.1| glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|122280458|sp|Q04QQ5|MURI_LEPBJ RecName: Full=Glutamate racemase
gi|122284619|sp|Q053X4|MURI_LEPBL RecName: Full=Glutamate racemase
gi|116120328|gb|ABJ78371.1| Glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116125494|gb|ABJ76765.1| Glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 258
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL VL+ + E +Y D PYG E ++ L D+ +
Sbjct: 7 IGLMDSGMGGLSVLKGILKYDAELEVVYYGDLKNSPYGEKETS----EILELVRDVCKRL 62
Query: 76 QP---VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q ++ACNTA + LR F S+ G PAIK A I++L+TP T
Sbjct: 63 QEENVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKIALLATPVTQ 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L ++ I VS LA V+ K + DE +K + + +
Sbjct: 122 REKKLQRLKAELGAEELILPVSCPGLAGLVD------KGEFDEAEKYLRPILKKLREENV 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
+ +VL CTHY + H+ + P + NS +I
Sbjct: 176 ENLVLGCTHYIFLKHIILKNFPNVRIYDGNSGTI 209
>gi|241759734|ref|ZP_04757834.1| glutamate racemase [Neisseria flavescens SK114]
gi|241319742|gb|EER56138.1| glutamate racemase [Neisseria flavescens SK114]
Length = 269
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ L VIACNT + ++ +M L + A +AA T++ I I++T T
Sbjct: 66 ENDVKAL-VIACNTIAAVAGQKILQKAGNMPVLDVISAGAEAALQTTKNNRIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IHS + + ++ +L VEE ++ +++ ++ +
Sbjct: 125 VNSNAYARAIHSKNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLADD---- 180
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 181 IDTLVLGCTHFPLL 194
>gi|217964697|ref|YP_002350375.1| glutamate racemase [Listeria monocytogenes HCC23]
gi|254766118|sp|B8DHZ5|MURI_LISMH RecName: Full=Glutamate racemase
gi|217333967|gb|ACK39761.1| glutamate racemase [Listeria monocytogenes HCC23]
gi|307570742|emb|CAR83921.1| racE [Listeria monocytogenes L99]
Length = 266
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ +L VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + ++ S VE EY I KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238
+ D ++L CTHYPL+ + V +++ + A LL N
Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDSTDEEIE 232
Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266
T T++F D A PD+ + + G
Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLG 265
>gi|322390073|ref|ZP_08063608.1| glutamate racemase [Streptococcus parasanguinis ATCC 903]
gi|321143200|gb|EFX38643.1| glutamate racemase [Streptococcus parasanguinis ATCC 903]
Length = 264
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K ++ V+ACNTA ++ +E++ + LG + P A T
Sbjct: 53 YTWQMVNFLLTKNVKMI-VLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I S + ++ VE + + + + ++
Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMEVSSLACPKFVPLVESNELASSVTKKVVYETLK 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|325130825|gb|EGC53559.1| glutamate racemase [Neisseria meningitidis OX99.30304]
Length = 270
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG + A + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGT-KSKATIEHFSMQIVDFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|86606820|ref|YP_475583.1| glutamate racemase [Synechococcus sp. JA-3-3Ab]
gi|86555362|gb|ABD00320.1| glutamate racemase [Synechococcus sp. JA-3-3Ab]
Length = 292
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I +FDSG+GGL V + +R +P+ +Y AD PYG D + ++ L F+ IL
Sbjct: 15 IGVFDSGLGGLTVWRALRRRLPQERLVYFADTARLPYG---DRSAEEILTFV-RQILRWM 70
Query: 74 KYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ QPV + V+ACNT+ L ++++ F ++ LG + Q AA Q I +++T AT+
Sbjct: 71 QAQPVKVVVMACNTSSALALEQVQQEF-ALPILGLILPGAQ-AALAQGSRIGVIATAATV 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCF 184
+ S I Y + + + E AC ++ E+++ E
Sbjct: 129 KSRAYSKAIQEYSALDPRRFPQPV----QCWEQACPEFVPLIEAGQLDGPELRQAAERYL 184
Query: 185 IEKEGKRTDVIVLACTHY 202
+ D +V CTHY
Sbjct: 185 QPLLQQGIDTLVYGCTHY 202
>gi|315302795|ref|ZP_07873560.1| glutamate racemase [Listeria ivanovii FSL F6-596]
gi|313628832|gb|EFR97200.1| glutamate racemase [Listeria ivanovii FSL F6-596]
Length = 266
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 26/273 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + +++ + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQIYYLGDTARCPYGPRDKEEVRQFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ +L VIACNTA ++R+ + +G + P + A T++ I +L T
Sbjct: 61 VDRGIKML-VIACNTATAAALYDIRAKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + ++ S VE EY I KK + + +
Sbjct: 119 TVESMAYPRALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238
+ D ++L CTHYPL+ + V +++ + A LL N
Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDDVAVINSGEETASEVSALLDYHNLLDASDKEIQ 232
Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266
T T++F D A P++ + + G
Sbjct: 233 HRFFTTGSTQIFQDIAXXWLNMPEMTVEHIKLG 265
>gi|312868338|ref|ZP_07728538.1| glutamate racemase [Streptococcus parasanguinis F0405]
gi|311096083|gb|EFQ54327.1| glutamate racemase [Streptococcus parasanguinis F0405]
Length = 264
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K ++ V+ACNTA ++ +E++ + LG + P A T
Sbjct: 53 YTWQMVNFLLTKNVKMI-VLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I S + ++ VE + + + + ++
Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMEVSSLACPKFVPLVESNELASSVTKKVVYETLK 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|269213840|ref|ZP_05982968.2| glutamate racemase [Neisseria cinerea ATCC 14685]
gi|269145167|gb|EEZ71585.1| glutamate racemase [Neisseria cinerea ATCC 14685]
Length = 293
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG + A + D L
Sbjct: 30 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGT-KSKATIEHFSMQIVDFL 88
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 89 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 148
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 149 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 204
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 205 IDTLVLGCTHFPLL 218
>gi|226365519|ref|YP_002783302.1| glutamate racemase [Rhodococcus opacus B4]
gi|226244009|dbj|BAH54357.1| glutamate racemase [Rhodococcus opacus B4]
Length = 257
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 106/246 (43%), Gaps = 20/246 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L PE I D G P+G + + R++ +D+
Sbjct: 3 VALIDSGLGMLPTAAWLRKLRPELDLILALDPDGAPWGPKPEQWVIDRVLATAQRSVDRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ V+ CNTA D +R P + +G VPAIK AAA S + + R
Sbjct: 63 AEVI-VLPCNTASVTALDHVREFVGPQVPVVGTVPAIKPAAAAFASVAVWATAATTASR- 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI + + + V+ LA ++ E E E+
Sbjct: 121 -YQADLIEKFGNGSSVVGVACHGLAEAIDR-------GEREAAAAAIASAAERTPGDVGA 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA----RRARCLLPRINTHQTRVFDDHAL 250
+VL CTHYPL+ P V D+++++A RR L R +T + V +
Sbjct: 173 VVLGCTHYPLMADEIAARLPAGVRLFDSAEAVAAQTLRRIDALN-RPSTGEGTV----EV 227
Query: 251 FLSGKP 256
FLSG+P
Sbjct: 228 FLSGRP 233
>gi|313206123|ref|YP_004045300.1| glutamate racemase [Riemerella anatipestifer DSM 15868]
gi|312445439|gb|ADQ81794.1| glutamate racemase [Riemerella anatipestifer DSM 15868]
gi|315022930|gb|EFT35953.1| glutamate racemase [Riemerella anatipestifer RA-YM]
gi|325336432|gb|ADZ12706.1| Glutamate racemase [Riemerella anatipestifer RA-GD]
Length = 271
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 11/234 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL V ++++ MP + IY D PYG+ A+ R ++ L
Sbjct: 9 QQPIGVFDSGVGGLTVAKEIKRQMPHENIIYFGDTKHLPYGDKSKEAI-VRFSEKIAEFL 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPAT 131
+ VIACN+A E++ + A + V + + AY + +++T AT
Sbjct: 68 LEQNCKAIVIACNSATANALKEVKELVGNRAIVFDVVNPVAEKIAYEIHTNVGVIATKAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-K 190
+ I + + +++ +L +EE K I I ++ K
Sbjct: 128 VNAGIYKKSIRRFNKFIKVDELATPLLVPAIEE-----GFKNHPITHSILYHYLSNSKLK 182
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQ 241
+ ++L CTHYPL++ +Q V +D+ +A + L + +N+ Q
Sbjct: 183 NIETLILGCTHYPLLLEEIKQYYGSRVRVIDSPSIVANYIKISLEKHHLLNSEQ 236
>gi|239787442|emb|CAX83914.1| Glutamate racemase [uncultured bacterium]
Length = 277
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 11/217 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ + P FIY+ D PYG +++ + + +L +
Sbjct: 10 IGIFDSGVGGLTVLKALVSRFPHERFIYLGDTARVPYGTKSARTVERYSIQVADCLLARG 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIK----QAAAYTQSGLISILSTPA 130
L V+ACNTA L + L+S P+ LG + P + AA + G + ++ T +
Sbjct: 70 VKGL-VVACNTASALGMEALKSHSPT-PILGVIEPGCRAAGALAAGLGRPGKVGVIGTRS 127
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + ++ + VEE +++ ++ +E +
Sbjct: 128 TVASGAYPAQLSRLDPGIEVFSLACPLFVPLVEEG----WLEQPAVRLIVEESLSPFLDQ 183
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
R D ++L CTHYPL+ V ++ V +D++ ++A
Sbjct: 184 RLDALILGCTHYPLLAPVIAEVMGSAVPLVDSATAVA 220
>gi|313667842|ref|YP_004048126.1| glutamate racemase [Neisseria lactamica ST-640]
gi|313005304|emb|CBN86737.1| glutamate racemase [Neisseria lactamica 020-06]
gi|325202734|gb|ADY98188.1| glutamate racemase [Neisseria meningitidis M01-240149]
Length = 270
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|309378294|emb|CBX23082.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|325144995|gb|EGC67278.1| glutamate racemase [Neisseria meningitidis M01-240013]
Length = 270
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|255324315|ref|ZP_05365436.1| glutamate racemase [Corynebacterium tuberculostearicum SK141]
gi|255298645|gb|EET77941.1| glutamate racemase [Corynebacterium tuberculostearicum SK141]
Length = 259
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P IY D PYG ++ + +++
Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPHESVIYTGDTAHSPYGPRPISEVRAFSQDVADRLVE 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ +L VIACNTA + R + PA+++A + T++G I ++ T T++
Sbjct: 66 RGCKML-VIACNTATAAFLHDARERYDIPIVEVIRPAVRRAMSTTRNGKIGVIGTEGTIK 124
Query: 134 RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+L + ++ + C + V I A R +I EG
Sbjct: 125 SGAYQDLFALNPKVQAFATACPDFVPFVERGITAGR-------------QILGVAEGYLA 171
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFR 210
+ + D +VL CTHYPL+ + +
Sbjct: 172 PLQEQGVDTLVLGCTHYPLLTGIIQ 196
>gi|78043344|ref|YP_359176.1| glutamate racemase [Carboxydothermus hydrogenoformans Z-2901]
gi|123577026|sp|Q3AFA8|MURI_CARHZ RecName: Full=Glutamate racemase
gi|77995459|gb|ABB14358.1| glutamate racemase [Carboxydothermus hydrogenoformans Z-2901]
Length = 265
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD- 73
I IFDSG+GG+ VL+++ L+P +F Y+ D PYG+ K+ L+ L I+
Sbjct: 7 GIGIFDSGVGGVTVLKELINLLPGENFYYLGDTAHVPYGSKS----KEELLILGDAIIRF 62
Query: 74 --KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
K + V ACNT+ + L+ +P + P K A + G +L+T AT
Sbjct: 63 FLKLGVKMVVFACNTSSAITLPILKERYPVLMEGMLEPLRKNMPAKAKVG---VLATEAT 119
Query: 132 LRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
++ Y L+ + Q +++++ +E+ K E+ ++ E KE
Sbjct: 120 VKSGLYQKKLMETNKFQ-EVYMIACPQYVPLIEKGIVSGKEVEEATREYFEPLL--KEEV 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
R +VL CTHYP + ++L P + +D + +AR
Sbjct: 177 RD--VVLGCTHYPFLTETIQKLYP-KIQVIDPAAYVARE 212
>gi|255994482|ref|ZP_05427617.1| glutamate racemase [Eubacterium saphenum ATCC 49989]
gi|255993195|gb|EEU03284.1| glutamate racemase [Eubacterium saphenum ATCC 49989]
Length = 267
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 7/220 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSG+GGL + + +P IY D PYG+ + +R D L +
Sbjct: 9 FDSGLGGLTCIASVSRRLPHEDIIYFGDTARTPYGSKSVKTI-QRFSAEICDFLLQKNVK 67
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATLRRTY 136
+ VIACN+ LR + + +G + + + A + I I+ T AT+
Sbjct: 68 MIVIACNSVSATSLGFLREKYKDIPIVGIIESAAEKAIDDAKEGNKIGIIGTKATISSMA 127
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
N+I V + + +EE I +K ++ E R + +V
Sbjct: 128 YKNIIEQSVEGADVAQKACPAFVPLIEEGIIENDIMNLSVKYYLDHFIAE---NRINTLV 184
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
L CTHYP I + ++ P + +D SD ++R+ +L +
Sbjct: 185 LGCTHYPFIANNIKRNYPN-LKLIDPSDEVSRQIEKILKK 223
>gi|229815852|ref|ZP_04446176.1| hypothetical protein COLINT_02906 [Collinsella intestinalis DSM
13280]
gi|229808547|gb|EEP44325.1| hypothetical protein COLINT_02906 [Collinsella intestinalis DSM
13280]
Length = 297
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 15/241 (6%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + I +FDSG+GGL V + + +P YV D PYG + ++ +
Sbjct: 7 RDCERPIGVFDSGLGGLTVARCIATSLPHESIYYVGDTKRCPYGVRPEEEVRS-FVLQAG 65
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L +++ + VIACNTA + P P + A T++ + +L+TP
Sbjct: 66 RWLAEHEVKIMVIACNTATAAGLRIAQQVLPVPVIGVIAPGARAAINSTRTRKVGVLATP 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKED-----------EIK 177
T+R + I + ++ + VE E A G ++E E +
Sbjct: 126 LTVRTGAYTRAIQDLDAGVDVYGCPAPSFVEIVEHELATGAHLQERWLQNGDIFDTLENR 185
Query: 178 KEIEGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
E+E I G + D +VL CTH+PL+ R V + +++ R +L
Sbjct: 186 VEVERTLAPIISGGAQVDTVVLGCTHFPLLAGPIRHALGPDVRVVSSAEETTRELEDILS 245
Query: 236 R 236
R
Sbjct: 246 R 246
>gi|94993693|ref|YP_601791.1| glutamate racemase [Streptococcus pyogenes MGAS10750]
gi|306827957|ref|ZP_07461224.1| glutamate racemase [Streptococcus pyogenes ATCC 10782]
gi|166231060|sp|Q1J8B4|MURI_STRPF RecName: Full=Glutamate racemase
gi|94547201|gb|ABF37247.1| Glutamate racemase [Streptococcus pyogenes MGAS10750]
gi|304429876|gb|EFM32918.1| glutamate racemase [Streptococcus pyogenes ATCC 10782]
Length = 264
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 28/252 (11%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L + +
Sbjct: 9 LDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V ACNTA + +E+++ + LG V P A T G + ++ TP T
Sbjct: 69 I-VFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT------ 120
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGK 190
+ S + + I L++ + +V AC + I E I K+I +
Sbjct: 121 ---VASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVG 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFD 246
+ D +VL CTHYPL+ + + + V +D+ R LL N HQ V
Sbjct: 175 KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAV-- 232
Query: 247 DHALFLSGKPDI 258
+H F + +I
Sbjct: 233 EHRFFTTANSEI 244
>gi|300789525|ref|YP_003769816.1| glutamate racemase [Amycolatopsis mediterranei U32]
gi|299799039|gb|ADJ49414.1| glutamate racemase [Amycolatopsis mediterranei U32]
Length = 257
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 8/251 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P YV D PYG + + ++++
Sbjct: 1 MFDSGVGGLTVARAILEQLPAEQLRYVGDTAHNPYGPLPIATARSYALAALDELVESGVK 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-RTY 136
L VIACNTA + R + +PA+++A T +G + ++ T T+R R Y
Sbjct: 61 AL-VIACNTASAACLRDARERYDVPVIEVVLPAVRRAVVATHTGRVGVIGTEGTVRSRAY 119
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
++ + I L S + R ++ ++ +G + D +V
Sbjct: 120 ED----AFAAAPAITLTS--VACPRFVDFVERGITTGRQVLGLAQGYLQPLLDAQVDTLV 173
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYPL+ V + + V + ++D A+ +L + TR FL+
Sbjct: 174 LGCTHYPLLQGVLQIVMGQEVTLVSSADETAKDLVRVLTEGDLLTTRDTPPRHEFLATGS 233
Query: 257 DIAMRRLMQGF 267
RL Q F
Sbjct: 234 AEPFTRLAQRF 244
>gi|284037266|ref|YP_003387196.1| glutamate racemase [Spirosoma linguale DSM 74]
gi|283816559|gb|ADB38397.1| glutamate racemase [Spirosoma linguale DSM 74]
Length = 280
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 30/268 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+++ +P+Y +IY+ D+ PYG + + + D+
Sbjct: 8 IGVFDSGYGGLTVLREIVKKLPQYDYIYLGDNARTPYGTRSFDTVYHYTLECVQHLFDR- 66
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSM-----AFLGAV-PAIKQAAAYTQSGLIS 124
L ++ACNTA + + +L + +P + LG + P + Y+++G +
Sbjct: 67 GCRLVILACNTASAKALRNIQQLDLPAQYPGLDGPDRRVLGVIRPTTEVIGTYSKTGKVG 126
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T T+ I + + + + VE + +K+ I+
Sbjct: 127 VLATRGTVTSESYRVEIEKFFPGLGVFQEACPMWVPLVENGEYDSPGADYFVKQHIDRLL 186
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIAR--------RARC 232
+ D ++LACTHYPL++ + +P L SDS+A A+C
Sbjct: 187 AQS--PDIDTLLLACTHYPLLLEKIKHFAPSGATILSQGGIVSDSLADYLVRHPEIEAQC 244
Query: 233 ----LLPRINTHQTRVFDDHALFLSGKP 256
+ T T FD A G+P
Sbjct: 245 SKHGQRTFLTTDATEDFDRQATIFYGQP 272
>gi|225552350|ref|ZP_03773290.1| glutamate racemase [Borrelia sp. SV1]
gi|225371348|gb|EEH00778.1| glutamate racemase [Borrelia sp. SV1]
Length = 261
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I+IFDSGIGGL + ++ + E ++YVAD+ FPYG L + ++FL
Sbjct: 2 KNFKEVIIIFDSGIGGLSYFKYIKSRIGECQYVYVADNKNFPYGEKSPEYLLEAVLFLIE 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 62 KLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIATN 117
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184
TL + + Q +IH + +I+ + E EY G K+D ++ +E
Sbjct: 118 TTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC-LEALK 165
Query: 185 IEKEGKRTDVIVLACTHY 202
E +++ L CTHY
Sbjct: 166 FEVVNTGREIVFLGCTHY 183
>gi|239833140|ref|ZP_04681469.1| Glutamate racemase [Ochrobactrum intermedium LMG 3301]
gi|239825407|gb|EEQ96975.1| Glutamate racemase [Ochrobactrum intermedium LMG 3301]
Length = 278
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 16/233 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+K + P + L + + +FD+GIG +++ +R P+ IY AD FPYG
Sbjct: 2 LKHETAPAVENLHDPVAVFDAGIGSYALVELIRRSQPQRDIIYFADRASFPYGAKS---- 57
Query: 61 KKRLMFLFSDILDKYQPVLS----VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ +L+ + + +Y L V+A N ++ D L+S F ++ G P ++ A A
Sbjct: 58 RDQLLSIMRHTI-RYLTGLGAQTIVLASNAPSVMVLDALKSEF-AVPVYGVAPPVRAAFA 115
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCH-IHLVSSMILASRVEEYACGIKIKEDE 175
++SG ++++ + + + + + + + L+++ + VE A + E
Sbjct: 116 ASRSGKVAVMGVRSMIESEELARFVRAEADRPEDVALINASAMVELVENGAFLRQPGETG 175
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW--LDNSDSI 226
K I R D + L+ TH P + F P DW LD +D +
Sbjct: 176 QKVAAFCDEIAASHPRIDTLTLSSTHLPWLRSFFETARP---DWRFLDPADDV 225
>gi|325570406|ref|ZP_08146183.1| glutamate racemase [Enterococcus casseliflavus ATCC 12755]
gi|325156616|gb|EGC68793.1| glutamate racemase [Enterococcus casseliflavus ATCC 12755]
Length = 277
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 14/249 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I DSG+GGL V+++ +P +Y+ D PYG + + +L+K
Sbjct: 13 IGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIAYTWQMTRFLLEKN 72
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+L VIACNTA + +E++ ++ +G + P + A +++ I ++ T T++
Sbjct: 73 IKML-VIACNTATAVALEEIKEKL-AIPVIGVILPGSRAAVKASKNQRIGVIGTNGTIKS 130
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+H + ++ VE +Y + KK + + KR
Sbjct: 131 DSYKRALHGKAPHASVVSLACPKFVPIVESKQYHSSVA------KKIVAETLRPLKNKRL 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDHA 249
D ++L CTHYPL+ + + + +D+ LL + T Q HA
Sbjct: 185 DTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPQHA 244
Query: 250 LFLSGKPDI 258
F +G P I
Sbjct: 245 FFTTGSPKI 253
>gi|225867935|ref|YP_002743883.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus]
gi|225871149|ref|YP_002747096.1| glutamate racemase [Streptococcus equi subsp. equi 4047]
gi|254766125|sp|C0M7R0|MURI_STRE4 RecName: Full=Glutamate racemase
gi|259509918|sp|C0MGG5|MURI_STRS7 RecName: Full=Glutamate racemase
gi|225700553|emb|CAW95041.1| glutamate racemase [Streptococcus equi subsp. equi 4047]
gi|225701211|emb|CAW98144.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus]
Length = 264
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 33/255 (12%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+ ++ +P IY+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVSELMRQLPHEKIIYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K+ ++ V ACNTA + +E++ + LG + P A T G
Sbjct: 53 YTWELVRFLLTKHVKMI-VFACNTATAVAWEEVKEAL-DIPVLGVILPGASAAIKATSGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKE 173
+ ++ T T I S + Q I L++ + +V AC +I
Sbjct: 111 KVGVIGTSMT---------ISSGIYQEKIQLLAPTV---QVTSLACPRFVPIVESNEISS 158
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
KK + GK D +VL CTHYPL+ + + + V +D+ R L
Sbjct: 159 SVAKKIVYETLAPLVGK-IDTLVLGCTHYPLLRTIIQNVLGPQVKLIDSGAECVRDISVL 217
Query: 234 LPRINTHQTRVFDDH 248
L + +R D+H
Sbjct: 218 LNYFEINGSR-DDEH 231
>gi|284049086|ref|YP_003399425.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
gi|283953307|gb|ADB48110.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
Length = 279
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 6/195 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + I + DSG+GGL VL+ ++ +P FI++ D PYGN + R + +D
Sbjct: 3 QAKQPIGVIDSGVGGLTVLKWLQAKLPHEDFIFIGDTARTPYGNRSREEI-TRFVAEMTD 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
LDK V+ACNT L D ++ P +G + T++ + +T
Sbjct: 62 WLDKRHIKQLVVACNTITVLGLDVIKGNHP-FDVIGMAKGSRMVPGVTKNNRVGFFATDF 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ I + + +E G K E+K I +
Sbjct: 121 TVSTGAHKREIQRICPEIQVFGQGCPKFVPLIE----GEKFGSPELKAAIHEYADKLREH 176
Query: 191 RTDVIVLACTHYPLI 205
D ++L+CTHYP +
Sbjct: 177 NVDTVLLSCTHYPFV 191
>gi|299822584|ref|ZP_07054470.1| glutamate racemase [Listeria grayi DSM 20601]
gi|299816113|gb|EFI83351.1| glutamate racemase [Listeria grayi DSM 20601]
Length = 270
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 22/258 (8%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVKEVLKQLPHEQIYYLGDTARCPYGPRKPEEVLKFTREMSHFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ +L VIACNTA ++R+ + +G + P + A +++ I++L T
Sbjct: 61 IDRGIKML-VIACNTATAAALVQIRAEL-DIPVIGVIQPGSRAALKESRNNKIAVLGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
T++ + Q + ++ S VE EY I KK + + +
Sbjct: 119 TVKSEAYPKALKRLNHQVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++L CTHYPL+ + V +++ + A LL D H
Sbjct: 173 NTTIDTVILGCTHYPLLKPIIENFLGADVAVINSGEETASEVSALL-----------DYH 221
Query: 249 ALFLSGKPDIAMRRLMQG 266
L SG I R G
Sbjct: 222 GLLDSGGDTIKHRFFTTG 239
>gi|304390777|ref|ZP_07372729.1| glutamate racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|304325660|gb|EFL92906.1| glutamate racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
Length = 271
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ++N P I IFDSG+GGL V + + +P Y+ D PYG +
Sbjct: 1 MIVNNAP--------IGIFDSGLGGLTVARSIIDQLPGESVTYIGDTANSPYGTKPVERV 52
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAV-PAIKQAAAY 117
K+ + + ++D+ +L VIACNTA RS + + L + PA+ +A +
Sbjct: 53 KELSLSVMDKLVDRGVKML-VIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSA 111
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T++G I +++T T+ +H+Y Q + + VE GI + +
Sbjct: 112 TRNGHIGVIATHTTIETETYQRALHAY-QQVQVSAKACPAFVDFVER---GITSGPELLA 167
Query: 178 KEIEGCFIEK-EGKRTDVIVLACTHYPLI 205
E ++E D +VL CTHYPL+
Sbjct: 168 VARE--YLEPIRDAGVDTLVLGCTHYPLL 194
>gi|296393941|ref|YP_003658825.1| glutamate racemase [Segniliparus rotundus DSM 44985]
gi|296181088|gb|ADG97994.1| glutamate racemase [Segniliparus rotundus DSM 44985]
Length = 274
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + L+P YVAD PYG +++ + + ++
Sbjct: 7 EAPIGVFDSGVGGLTVARAVADLLPHEAMRYVADSAHQPYGPQSVAQVRRHALAVLDSLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D+ +L VIACN+A + R +P +PA++ A A T+SG I ++ T T+
Sbjct: 67 DEGVKML-VIACNSASVACLADARERYPVPVVEVVLPAVRSALAATRSGRIGVIGTRITI 125
Query: 133 -RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEGK 190
R Y + H +VS+ R ++ I++ + E+E +E
Sbjct: 126 ASRAYEDSF---AAVAPHTSVVSAPC--PRFVDF-----IEQGVVSGPELEALALEYLAP 175
Query: 191 RT----DVIVLACTHYPLI 205
T DV+VL CTHYPL+
Sbjct: 176 LTAADVDVLVLGCTHYPLL 194
>gi|126652650|ref|ZP_01724811.1| glutamate racemase [Bacillus sp. B14905]
gi|126590499|gb|EAZ84617.1| glutamate racemase [Bacillus sp. B14905]
Length = 265
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 12/243 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V +++ +P Y+ D PYG + + + + L+K
Sbjct: 5 IGVIDSGVGGLTVAKEIMKRLPNETIYYIGDTARCPYGPRSRQEV-RNFTWQMAKALEKM 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134
+ VIACNTA + + L+ P LG + A +AA T+ + +L+T T++
Sbjct: 64 NVKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEGTIKS 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ S + HI ++ VE EY K + K I + ++
Sbjct: 123 GAYEEALLSLNTSTHIIPLACPTFVPLVESGEY------KGEFATKLIAEGLKPLKNQQF 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
D ++L CTHYP++ + V+ L +++ A+ + +L T H F
Sbjct: 177 DTVILGCTHYPILQKQIEAVVGDEVNVLSSAEETAKDVQEMLAYNGTLANANTVPAHKFF 236
Query: 252 LSG 254
+G
Sbjct: 237 ATG 239
>gi|300866341|ref|ZP_07111042.1| Glutamate racemase [Oscillatoria sp. PCC 6506]
gi|300335646|emb|CBN56202.1| Glutamate racemase [Oscillatoria sp. PCC 6506]
Length = 288
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE----DHALKKRLMFLF 68
Q I IFDSG+GGL VL+++ +P +Y D PYG H +++ + +L
Sbjct: 7 QQRIGIFDSGVGGLTVLRELYRQLPGESILYFGDTARLPYGTRSAGEITHFVREIMAWLR 66
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
S + + ++ACNT+ L + +++ F + LG + P + AA Q I +++
Sbjct: 67 SLNVK-----MVIMACNTSSALALETVQAEF-DIPILGVILPGAR--AAVQQGKRIGVIA 118
Query: 128 TPATL-----RRTYTSNLIHSYVSQCHIHLVSSMILASRV-EEYACGIKIKEDEIKKEIE 181
TPAT RR ++S V Q +I +R+ + Y E+ +E
Sbjct: 119 TPATAASNAYRRAILEMDVNSQVWQVGCPEFVPLIEQNRIYDPYTL-------EVAREYL 171
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
I+++ D +V CTHYP + V R L
Sbjct: 172 APLIQQQ---IDTLVYGCTHYPHLAPVVRSL 199
>gi|297622727|ref|YP_003704161.1| glutamate racemase [Truepera radiovictrix DSM 17093]
gi|297163907|gb|ADI13618.1| glutamate racemase [Truepera radiovictrix DSM 17093]
Length = 270
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL +R L+P HF+YV D PYG+ ++ + + +L +
Sbjct: 11 VFDSGVGGLTVLAALRALLPAEHFLYVGDTARVPYGSKPLEMVRAFAAEICALLLSRGVK 70
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ V+ACNTA L + P + P ++ A G I +L T T+R
Sbjct: 71 GI-VVACNTASAAALPGLAAELPVPVWGVIAPGVQAALRRAPGGRIGVLGTAGTIRTGAY 129
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + C + + VEE + + I + + ++ K+ D +L
Sbjct: 130 QRPLEA--AGCRVWARPCPLFVPIVEE-----GVSDTVIARLVAEHYL-KDAPALDAAIL 181
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
CTHYP + + ++ P LD+++ AR
Sbjct: 182 GCTHYPALKGILSEVLPG-TALLDSAEETAR 211
>gi|20807090|ref|NP_622261.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4]
gi|24418565|sp|Q8RC52|MURI2_THETN RecName: Full=Glutamate racemase 2
gi|20515581|gb|AAM23865.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4]
Length = 264
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 34/234 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I +FDSG+GGL VL+++ ++PE +IY D PYG+ K+ + I++
Sbjct: 6 IGVFDSGVGGLTVLKRLIQVLPEEDYIYFGDTKRVPYGDRS----KEEIELFAGQIINFM 61
Query: 74 KYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPAT 131
K + V + VIACNT I + + + + A ++ Y T++ + +++T T
Sbjct: 62 KEKNVKAVVIACNTTCATID---KGKY-DIELFDVLKAGAESGVYCTKNKKVGVIATKRT 117
Query: 132 LR-RTYTSNL------IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ R+Y N+ I Y C + L+ + S + A +
Sbjct: 118 VESRSYEINIKSINPQIEVYQKACPEFVPLIEKGLYNSHLAYKAA-------------KD 164
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
C E +GK D ++L CTHYPL+ + + + V +D + ++ + L R
Sbjct: 165 CLEEFKGKEIDTLILGCTHYPLMEPIIKAIMGDGVKVVDPAVRLSHEVKEYLER 218
>gi|332686497|ref|YP_004456271.1| glutamate racemase [Melissococcus plutonius ATCC 35311]
gi|332370506|dbj|BAK21462.1| glutamate racemase [Melissococcus plutonius ATCC 35311]
Length = 273
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I + DSG+GGL V++++ +P +FIY+ D PYG+ + + + ++ L
Sbjct: 4 QYAIGLIDSGVGGLTVVKELCRQLPNENFIYLGDTAHCPYGSKPTEQV-IQYTWQMTNFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + L VIACNTA + +E+++T + +G + P + A A T+S I ++ T T
Sbjct: 63 LRKKIKLLVIACNTATAAVLEEIKNTL-DIPVIGVIAPGARAAIAATKSQRIGVIGTEGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI--KIKEDEIKKEIEGCFIEKEG 189
++ I V + VS + S V G IK EI + +
Sbjct: 122 IKSQAYEKNIKLLVEK---SFVSCLACPSFVPLVEMGNYHTIKAKEI---VTKTLAPLKL 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFD 246
K+ D +VL CTHYPL+ + V +D S + + LL ++ ++QT
Sbjct: 176 KQLDTLVLGCTHYPLLRSFIQTAIGSQVTLIDPSIETVKEIQDLLAHSNKLTSNQTNNNP 235
Query: 247 DHALFLSG 254
+ +G
Sbjct: 236 SRKFYTTG 243
>gi|194099309|ref|YP_002002407.1| glutamate racemase [Neisseria gonorrhoeae NCCP11945]
gi|193934599|gb|ACF30423.1| glutamate racemase [Neisseria gonorrhoeae NCCP11945]
Length = 326
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 121
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 122 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 182 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 237
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 238 IDTLVLGCTHFPLL 251
>gi|296875970|ref|ZP_06900029.1| glutamate racemase [Streptococcus parasanguinis ATCC 15912]
gi|296433045|gb|EFH18833.1| glutamate racemase [Streptococcus parasanguinis ATCC 15912]
Length = 264
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 16/242 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K ++ V+ACNTA ++ +E++ + LG + P A T
Sbjct: 53 YTWQMVNFLLTKNVKMI-VLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I S + ++ VE + + + + ++
Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMKVTSLACPKFVPLVESNELASSVTKKVVYETLK 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225
Query: 242 TR 243
+R
Sbjct: 226 SR 227
>gi|195978747|ref|YP_002123991.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975452|gb|ACG62978.1| glutamate racemase MurI [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 292
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 33/255 (12%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+ ++ +P IY+ D PYG +++
Sbjct: 29 MDNRP--------IGFLDSGVGGLTVVSELMRQLPHEKIIYIGDSARAPYGPRPAEQIRE 80
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K+ ++ V ACNTA + +E++ + LG + P A T G
Sbjct: 81 YTWELVRFLLTKHVKMI-VFACNTATAVAWEEVKEAL-DIPVLGVILPGASAAIKATSGG 138
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKE 173
+ ++ T T I S + Q I L++ + +V AC +I
Sbjct: 139 KVGVIGTSMT---------ISSGIYQEKIQLLAPTV---QVTSLACPRFVPIVESNEISS 186
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
KK + GK D +VL CTHYPL+ + + + V +D+ R L
Sbjct: 187 SVAKKIVYETLAPLVGK-IDTLVLGCTHYPLLRTIIQNVLGPQVKLIDSGAECVRDISVL 245
Query: 234 LPRINTHQTRVFDDH 248
L + +R D+H
Sbjct: 246 LNYFEINGSR-DDEH 259
>gi|293398523|ref|ZP_06642701.1| glutamate racemase [Neisseria gonorrhoeae F62]
gi|291610994|gb|EFF40091.1| glutamate racemase [Neisseria gonorrhoeae F62]
Length = 326
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 121
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 122 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 182 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 237
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 238 IDTLVLGCTHFPLL 251
>gi|290967732|ref|ZP_06559287.1| glutamate racemase [Megasphaera genomosp. type_1 str. 28L]
gi|290782248|gb|EFD94821.1| glutamate racemase [Megasphaera genomosp. type_1 str. 28L]
Length = 267
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL V+ K+R L+P + IYV D PYG+ ++ DIL
Sbjct: 8 IGIFDSGVGGLTVVNKLRMLLPHENIIYVGDTKRNPYGSRT----AAEILSYTRDILRFM 63
Query: 74 KYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q V L I CNT + +L P +G IK A + G I++ +T T+
Sbjct: 64 SAQSVKLVAIGCNTVTATVYPQLMQEVP-YPLIGMSKGIKTAQKISAGGTIAVFATELTI 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I LA +E Y G KI ++K + +
Sbjct: 123 ANHSHKKAAAAWDPGLKIIEQPCPELAGLIERGYLQGTKIMA-PLQKYLAPVL----QTQ 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D + CTH+P I +F LS + ++D + +A
Sbjct: 178 ADTAIFGCTHFPFIQPLFEMLSQDRLAFVDPAHEMA 213
>gi|145222944|ref|YP_001133622.1| glutamate racemase [Mycobacterium gilvum PYR-GCK]
gi|145215430|gb|ABP44834.1| glutamate racemase [Mycobacterium gilvum PYR-GCK]
Length = 278
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P IYV D PYG ++ + + D+ +
Sbjct: 9 IGIFDSGVGGLTVARAVIDQLPHEDIIYVGDTGNGPYGPLTIPQIRAHALAIGDDLAGRG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L VIACN+A + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 69 IKAL-VIACNSASSACLRDARERYAPIPVVEVILPAVRRAVAATRNGRIGVIGTAATI-- 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ S+ + I + + R ++ ++ E + + D
Sbjct: 126 -ASGAYQDSFAAARDIEVFG--VACPRFVDFVERGVTSGRQVLGLAEAYLEPLQRAQVDT 182
Query: 195 IVLACTHYPLI 205
+VL CTHYP++
Sbjct: 183 LVLGCTHYPML 193
>gi|224476259|ref|YP_002633865.1| glutamate racemase [Staphylococcus carnosus subsp. carnosus TM300]
gi|254766124|sp|B9DPT7|MURI_STACT RecName: Full=Glutamate racemase
gi|222420866|emb|CAL27680.1| putative glutamate racemase [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 266
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 7/245 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG E ++K + L +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDSARCPYGPREGDEVRKFTVQLAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + D L+ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALDTLKELLP-IPVIGVIEPGSRTAIMTTKNNNVMVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I + + V+ VE+ + + + I
Sbjct: 119 TIKSEAYTKHIKAINPHVDVTGVACPDFVPLVEQMRYHDPVPTNIV---IHQTLKNYRTN 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
+ D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 176 KADTVILGCTHYPLLFEPLHDYFGGSKTVISSGLETAREVSALLTFSNEHAPYTPNTKHR 235
Query: 250 LFLSG 254
F +G
Sbjct: 236 FFATG 240
>gi|227544196|ref|ZP_03974245.1| glutamate racemase [Lactobacillus reuteri CF48-3A]
gi|300908191|ref|ZP_07125657.1| glutamate racemase [Lactobacillus reuteri SD2112]
gi|227185832|gb|EEI65903.1| glutamate racemase [Lactobacillus reuteri CF48-3A]
gi|300894618|gb|EFK87974.1| glutamate racemase [Lactobacillus reuteri SD2112]
Length = 267
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 6/239 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V++ +R +P+ I+V D FPYG +++ + + +L++
Sbjct: 6 IGVMDSGLGGLSVIRVLREQLPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLLEQD 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ +IACNTA L++ P + +G + AA I ++ T +T++
Sbjct: 66 VKMM-IIACNTATAAALRLLQNELP-IPVIGVIEPGAMAATQHHYKKIGVIGTESTIKNG 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + + L S VE G + + E+E F + + + +
Sbjct: 124 AYAKTLAKLNPDLSVISSPAQPLVSIVEHGQTGTSEAQKAVDTELE-VF---DNQSIEAL 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+L CTH+P + V +D + R+A+ LL N + L+ +G
Sbjct: 180 ILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTGKNQLSDNLASSINLYSTG 238
>gi|257866171|ref|ZP_05645824.1| glutamate racemase [Enterococcus casseliflavus EC30]
gi|257872501|ref|ZP_05652154.1| glutamate racemase [Enterococcus casseliflavus EC10]
gi|257800105|gb|EEV29157.1| glutamate racemase [Enterococcus casseliflavus EC30]
gi|257806665|gb|EEV35487.1| glutamate racemase [Enterococcus casseliflavus EC10]
Length = 274
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 16/250 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I DSG+GGL V+++ +P +Y+ D PYG + + + +L+K
Sbjct: 10 IGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIEYTWQMTRFLLEKN 69
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+L VIACNTA + +E++ T P + + +P + A +++ I ++ T T++
Sbjct: 70 IKML-VIACNTATAVALEEIKEQLTIPVIGVI--LPGSRAAVKASKNQRIGVIGTNGTIK 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+H + ++ VE +Y + KK + + KR
Sbjct: 127 SDSYKRALHGKAPHASVVSLACPKFVPIVESKQYHSSVA------KKIVAETLRPLKNKR 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDH 248
D ++L CTHYPL+ + + + +D+ LL + T Q H
Sbjct: 181 LDTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPKH 240
Query: 249 ALFLSGKPDI 258
A F +G P +
Sbjct: 241 AFFTTGSPKM 250
>gi|254385389|ref|ZP_05000717.1| glutamate racemase [Streptomyces sp. Mg1]
gi|194344262|gb|EDX25228.1| glutamate racemase [Streptomyces sp. Mg1]
Length = 263
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L MR L P+ + +D G P+G L +R + + +
Sbjct: 3 IALMDSGIGLLAAAAAMRRLRPDADLVISSDPDGMPWGPRTPADLTERAVAVAR-AAAAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIVACNTASVHSLPNLRAELEPAIPVIGTVPAIKPAAA--AGGRVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + + V LA VE ++ + + TDV
Sbjct: 120 PYQRGLIRDFAAGVRVTEVPCPGLADAVEHGNEEEVVRAVAAAAALTPPDV------TDV 173
Query: 195 IVLACTHYPLIVHVFR 210
VL CTHY L+ V R
Sbjct: 174 -VLGCTHYELVDEVIR 188
>gi|257875806|ref|ZP_05655459.1| glutamate racemase [Enterococcus casseliflavus EC20]
gi|257809972|gb|EEV38792.1| glutamate racemase [Enterococcus casseliflavus EC20]
Length = 274
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 14/249 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I DSG+GGL V+++ +P +Y+ D PYG + + + +L+K
Sbjct: 10 IGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIEYTWQMTRFLLEKN 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+L VIACNTA + +E++ ++ +G + P + A +++ I ++ T T++
Sbjct: 70 IKML-VIACNTATAVALEEIKEQL-AIPVIGVILPGSRAAVKASKNQRIGVIGTNGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+H + ++ VE +Y + KK + + KR
Sbjct: 128 DSYKRALHGKAPHASVVSLACPKFVPIVESKQYHSSVA------KKIVAETLRPLKNKRL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDHA 249
D ++L CTHYPL+ + + + +D+ LL + T Q HA
Sbjct: 182 DTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPQHA 241
Query: 250 LFLSGKPDI 258
F +G P +
Sbjct: 242 FFTTGSPKM 250
>gi|148543776|ref|YP_001271146.1| glutamate racemase [Lactobacillus reuteri DSM 20016]
gi|184153182|ref|YP_001841523.1| glutamate racemase [Lactobacillus reuteri JCM 1112]
gi|227363244|ref|ZP_03847376.1| glutamate racemase [Lactobacillus reuteri MM2-3]
gi|325682148|ref|ZP_08161666.1| glutamate racemase [Lactobacillus reuteri MM4-1A]
gi|167017317|sp|A5VIY5|MURI_LACRD RecName: Full=Glutamate racemase
gi|229486242|sp|B2G6G1|MURI_LACRJ RecName: Full=Glutamate racemase
gi|148530810|gb|ABQ82809.1| glutamate racemase [Lactobacillus reuteri DSM 20016]
gi|183224526|dbj|BAG25043.1| glutamate racemase [Lactobacillus reuteri JCM 1112]
gi|227071700|gb|EEI09991.1| glutamate racemase [Lactobacillus reuteri MM2-3]
gi|324978792|gb|EGC15741.1| glutamate racemase [Lactobacillus reuteri MM4-1A]
Length = 267
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 6/239 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V++ +R +P+ I+V D FPYG +++ + + +L++
Sbjct: 6 IGVMDSGLGGLSVIRVLREQLPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLLEQD 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ +IACNTA L++ P + +G + AA I ++ T +T++
Sbjct: 66 VKMM-IIACNTATAAALRLLQNELP-IPVIGVIKPGAMAATQHHYKKIGVIGTESTIKNG 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + + L S VE G + + E+E F + + + +
Sbjct: 124 AYAKTLAKLNPDLSVISSPAQPLVSIVEHGQTGTSEAQKAVDTELE-VF---DNQSIEAL 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+L CTH+P + V +D + R+A+ LL N + L+ +G
Sbjct: 180 ILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTGKNQLSDNLASSINLYSTG 238
>gi|329947436|ref|ZP_08294640.1| glutamate racemase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328525186|gb|EGF52237.1| glutamate racemase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 280
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 12/226 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++D+
Sbjct: 1 MFDSGVGGLTVARSVLDQLPHERVLYIGDTANGPYGPRDIAEVRSLALSIMDELVDRGVK 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPATL- 132
+L VIACNTA + + R + + + PA + AA T++G + +++T T+
Sbjct: 61 LL-VIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGRVGLIATRGTVD 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R Y L + + L S R E A E+ E +
Sbjct: 120 SRAYDDAL----QAVPGVELFSQAC--PRFVELAERGVTTGPEVLDVAEEYLAPIKAAGV 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D ++L CTHYPL+V + V + +SD A+ L R N
Sbjct: 174 DTLILGCTHYPLLVGPISYVMGEEVALVTSSDETAKDVYRALARRN 219
>gi|229490649|ref|ZP_04384487.1| glutamate racemase [Rhodococcus erythropolis SK121]
gi|229322469|gb|EEN88252.1| glutamate racemase [Rhodococcus erythropolis SK121]
Length = 254
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G + + R++ LD+
Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLVLSLDPDGAPWGPKPEPWVVDRVLGAVRRSLDRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ V+ CNTA +R P + +G VPAIK AAA S ++I +T AT
Sbjct: 63 AQVI-VLPCNTASVTALPHVRELVGPGVPVIGTVPAIKPAAAACDS--VAIWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-- 192
Y ++LI + + + V LA + D + IE RT
Sbjct: 120 RYQADLIEQFGNGAKVVGVPCHGLADSI-----------DLGDRAAALAAIESAVARTPD 168
Query: 193 DV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
DV +VL CTHYPL+ P V D+++++AR+
Sbjct: 169 DVNGVVLGCTHYPLLADEIAARLPAGVTLFDSAEAVARQ 207
>gi|317164818|gb|ADV08359.1| glutamate racemase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 349
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 86 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 144
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 145 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 204
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 205 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 260
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 261 IDTLVLGCTHFPLL 274
>gi|225571415|ref|ZP_03780411.1| hypothetical protein CLOHYLEM_07513 [Clostridium hylemonae DSM
15053]
gi|225159891|gb|EEG72510.1| hypothetical protein CLOHYLEM_07513 [Clostridium hylemonae DSM
15053]
Length = 273
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILD 73
I +FDSG+GGL V +++ +P+ + +Y D PYG+ + + + R + F L+
Sbjct: 11 IGVFDSGVGGLTVAREIMRQLPDENIVYFGDTARVPYGSKSRNNIIRFSRQIIRF---LE 67
Query: 74 KYQPVLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
VIACNTA L D ++ S P + + VP + A T+S I ++ T AT
Sbjct: 68 TKGVKAIVIACNTASALALDVVKEESGIPIIGVI--VPGARAAVKETKSKKIGVVGTEAT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ S +I + + + VEE + DEI IE E +
Sbjct: 126 IQSHTYSKVITDMEPEASVIGKPCPLFVPLVEEGFAKHHVT-DEI---IEYYLDEMKHSD 181
Query: 192 TDVIVLACTHYPLI 205
D ++L CTHYPL+
Sbjct: 182 IDTMILGCTHYPLL 195
>gi|229553813|ref|ZP_04442538.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus LMS2-1]
gi|229312836|gb|EEN78809.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus LMS2-1]
Length = 485
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L
Sbjct: 4 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 63
Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
K+ +L VIACNT A LIK L+ + +G + P + A TQ+G I I++
Sbjct: 64 TKHIKML-VIACNTATAAALPLIKARLK-----IPVIGVIKPGSRAALKATQTGHIGIIA 117
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + + + +++ S VE I + + ++ +
Sbjct: 118 TEGTVKSGAYPKALRAKAPNIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHQD 177
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246
D +VL CTHYP++ + + + V +D+ LL + +
Sbjct: 178 ----IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVP 233
Query: 247 DHALFLSGKPDI 258
H + +G P +
Sbjct: 234 THTYYTTGAPSM 245
>gi|332673655|gb|AEE70472.1| glutamate racemase [Helicobacter pylori 83]
Length = 255
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 34/249 (13%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKYSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ N + +HL +S+ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVLHLATSLFV-PLIEE-----NILESELLETCMRYYFTPLK 171
Query: 190 KRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCL 233
+V++L CTH+PLI H + LS P V++L ++ + A C
Sbjct: 172 ILPEVVILGCTHFPLIAHQIKGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA-CA 230
Query: 234 LPRINTHQT 242
P++ H +
Sbjct: 231 FPKVEFHAS 239
>gi|297379750|gb|ADI34637.1| glutamate racemase [Helicobacter pylori v225d]
Length = 255
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQ-------LSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAHPIESYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|312143228|ref|YP_003994674.1| glutamate racemase [Halanaerobium sp. 'sapolanicus']
gi|311903879|gb|ADQ14320.1| glutamate racemase [Halanaerobium sp. 'sapolanicus']
Length = 291
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 29/270 (10%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I + DSG+GGL V +++ L+P IY D + PYG + +++ + + + +
Sbjct: 5 KRAIGLLDSGVGGLTVAREIFKLLPGEDIIYYGDTLHLPYGPKKLSEVREYVENIIAYLK 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNT + D ++ F F A K+A +Q+ I+++ T T+
Sbjct: 65 QEKNVKAVVIACNTGSSAALDYVKQKFEIPIFGMIDSAAKKAVKVSQNNKIAVIGTEGTI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR- 191
SQ + + S + AC +K E K G +EK R
Sbjct: 125 N------------SQAYQKAIKYESAESEIFAKACPGFVKLVEAGK-FSGPEVEKTAYRY 171
Query: 192 --------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
DV++L CTH+P ++ V ++ V ++ + A + R L + N
Sbjct: 172 LESIIKAKVDVLILGCTHFPYLMPVLAKVMGKDVMLVNPAQETALKFRKELNKANLLNKD 231
Query: 244 VF-------DDHALFLSGKPDIAMRRLMQG 266
+F +H +S + I+ L G
Sbjct: 232 IFLNKDIVEGEHKFIVSDESRISKSFLEHG 261
>gi|306480261|emb|CBV36488.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 32/248 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA +L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASSLALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
R N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 RSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234
+V++L CTH+PLI H LS P V++L ++ + A C
Sbjct: 173 LPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLHQKYALKKNA-CAF 231
Query: 235 PRINTHQT 242
P++ H +
Sbjct: 232 PKVEFHAS 239
>gi|258538968|ref|YP_003173467.1| glutamate racemase [Lactobacillus rhamnosus Lc 705]
gi|257150644|emb|CAR89616.1| Glutamate racemase [Lactobacillus rhamnosus Lc 705]
Length = 484
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
K+ +L VIACNT A LIK L+ + +G + P + A TQ+G I I++
Sbjct: 63 TKHIKML-VIACNTATAAALPLIKARLK-----IPVIGVIKPGSRAALKATQTGHIGIIA 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + + + +++ S VE I + + ++ +
Sbjct: 117 TEGTVKSGAYPKALRAKAPNIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHQD 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246
D +VL CTHYP++ + + + V +D+ LL + +
Sbjct: 177 ----IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVP 232
Query: 247 DHALFLSGKPDI 258
H + +G P +
Sbjct: 233 THTYYTTGAPSM 244
>gi|188527606|ref|YP_001910293.1| glutamate racemase [Helicobacter pylori Shi470]
gi|229486238|sp|B2UTT1|MURI_HELPS RecName: Full=Glutamate racemase
gi|188143846|gb|ACD48263.1| glutamate racemase [Helicobacter pylori Shi470]
Length = 255
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|323706012|ref|ZP_08117582.1| glutamate racemase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534626|gb|EGB24407.1| glutamate racemase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 263
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+K++ L+P +IY D PYG+ ++ + + + +K
Sbjct: 6 IGVFDSGVGGLTVLKKLKELLPNEDYIYFGDTKRVPYGDKSKGEIEMYARQIINFMNEKN 65
Query: 76 QPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++ VIACNT I KDE + S+ GA + AA T++ + +++T T
Sbjct: 66 TKII-VIACNTTCASIDKDEYKEILFSVLEAGA----ESAADITKNNKVGVIATTRT--- 117
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIEKE---- 188
+ S + I L + + V + AC + + E + + E + KE
Sbjct: 118 ------VESGSYEKSIRLKNGDV---DVFQKACPGFVPLVEKGLSESDESFKLAKEYLKA 168
Query: 189 --GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
+ D +VL CTHYP++++ + + V +D
Sbjct: 169 LNDEGIDTLVLGCTHYPILLNAIKNAAREDVLIVD 203
>gi|323489950|ref|ZP_08095171.1| glutamate racemase [Planococcus donghaensis MPA1U2]
gi|323396246|gb|EGA89071.1| glutamate racemase [Planococcus donghaensis MPA1U2]
Length = 267
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 103/258 (39%), Gaps = 26/258 (10%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ L+P Y+ D+ PYG A + + ++
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIMKLLPNEQICYIGDNARCPYGP-RPLAEVRTYTWQMANA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L K + VIACNTA L+ P + +G + P + A + + I++L T
Sbjct: 60 LMKKNIKMLVIACNTATAAALYSLQKNLP-IPVIGVIFPGARAAVKSSTTNKIAVLGTSG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S VS H+ ++ VE E EG F + +
Sbjct: 119 TVKSGAYEKAVLSLVSSAHVIQLACPRFVPLVE-------------SDEYEGEFAHRIVQ 165
Query: 191 RT---------DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
T D +L CTHYPL+ ++ V L +++ A+ L N
Sbjct: 166 ETLATIAYEEFDTAILGCTHYPLLQGFIEEVLGDTVHVLSSAEETAKDVERYLHYKNQFA 225
Query: 242 TRVFDD-HALFLSGKPDI 258
R H + SG I
Sbjct: 226 NREKPPVHRFYTSGSTQI 243
>gi|258645749|ref|ZP_05733218.1| glutamate racemase [Dialister invisus DSM 15470]
gi|260403118|gb|EEW96665.1| glutamate racemase [Dialister invisus DSM 15470]
Length = 258
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL V ++ P FI++ D PYGN +
Sbjct: 1 MDNRP--------IGIMDSGVGGLTVACVLKEKYPNEKFIFIGDTARNPYGNKS----PE 48
Query: 63 RLMFLFSDI---LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
+ F ++ L Q + + ACNT + + P F G +P I + + +
Sbjct: 49 EVTFFAEEMKAFLAGKQVKMIIAACNT--------ITFSVPPSFFEGKIPVIGMSLDFPE 100
Query: 120 ---SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
++++ TP T+R + ++ + LA YA + +E I
Sbjct: 101 LESVNHLAVIGTPMTIRSHRHRERLKKDFPLMNVTEIPIDGLA-----YAIEMGKEESFI 155
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ I + + D VLACTHYPL+ VFR + P + +D ++ ++A +L
Sbjct: 156 YRMINKAVQKAGAESVDAAVLACTHYPLVAGVFRDILPNTL-LIDPAERTVKKAMSILAD 214
Query: 237 INTH 240
N
Sbjct: 215 QNGQ 218
>gi|85860927|ref|YP_463129.1| glutamate racemase [Syntrophus aciditrophicus SB]
gi|123517831|sp|Q2LXZ9|MURI_SYNAS RecName: Full=Glutamate racemase
gi|85724018|gb|ABC78961.1| glutamate racemase [Syntrophus aciditrophicus SB]
Length = 270
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL V++ + +P + +Y D PYG + + ++ L
Sbjct: 9 HPIGVFDSGVGGLTVVRALMERLPFENILYFGDTARVPYGVKSVETINAYARQI-TEFLL 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + L +IACNT + + + S P ++A A T++ + ++ TP T+
Sbjct: 68 RQEVKLLIIACNTMAAVARQSVESLSPVPVLDVIDAGARRAVAETRTHSVGVIGTPTTIN 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I + I + +L VEE + ++ + E D
Sbjct: 128 SNAYARAICRLAPETRIFSQACALLVPLVEEGWLDHPVTRLTAQEYLRPVLAEH----ID 183
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+VL CTHYPL+ + + ++ + +D+++++A
Sbjct: 184 TLVLGCTHYPLLKALLQDVAGPDIHLVDSAEAMA 217
>gi|313624059|gb|EFR94143.1| glutamate racemase [Listeria innocua FSL J1-023]
Length = 266
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAQFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ +L VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + ++ S VE EY I KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238
+ D ++L CTHYPL+ + V +++ + A LL N
Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIE 232
Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266
T T++F D A PD+ + + G
Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLG 265
>gi|16800269|ref|NP_470537.1| glutamate racemase [Listeria innocua Clip11262]
gi|20177980|sp|Q92CH2|MURI_LISIN RecName: Full=Glutamate racemase
gi|16413659|emb|CAC96431.1| racE [Listeria innocua Clip11262]
gi|313619282|gb|EFR91023.1| glutamate racemase [Listeria innocua FSL S4-378]
Length = 266
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAQFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ +L VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + ++ S VE EY I KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238
+ D ++L CTHYPL+ + V +++ + A LL N
Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDDEIE 232
Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266
T T++F D A PD+ + + G
Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLG 265
>gi|325955658|ref|YP_004239318.1| glutamate racemase [Weeksella virosa DSM 16922]
gi|323438276|gb|ADX68740.1| Glutamate racemase [Weeksella virosa DSM 16922]
Length = 269
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 15/241 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL ++++ L+P+ +Y D PYG A+KK + ++ +
Sbjct: 8 IGVFDSGVGGLNFAKEIKRLLPKESIVYFGDTKHLPYGEKSAEAIKKYSKEITQFLISQN 67
Query: 76 QPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++ACNT A +IK+ + + + + + AY I +++T AT
Sbjct: 68 CKAI-LVACNTATANAIEIIKE---VAGEEILVVDVINPVAEKVAYELRTKIGVIATKAT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + V++ +L +EE + + +E K+ +
Sbjct: 124 VNSCAYKKTIRKFNKHIKVVEVATPLLVPIIEEGLYNTNVS----RAVLEVYLSNKKLEG 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D I+L CTHYPLI Q+ V + NS I CL+ +++ Q +++ +
Sbjct: 180 IDSIILGCTHYPLIQKEIEQIFEGKVQVI-NSPLIV--VNCLIYQLHQRQQLANNNNPYY 236
Query: 252 L 252
L
Sbjct: 237 L 237
>gi|308063661|gb|ADO05548.1| glutamate racemase [Helicobacter pylori Sat464]
Length = 255
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L E++ S P + +G ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALKEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|199598101|ref|ZP_03211524.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus HN001]
gi|258507777|ref|YP_003170528.1| glutamate racemase [Lactobacillus rhamnosus GG]
gi|199591027|gb|EDY99110.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus HN001]
gi|257147704|emb|CAR86677.1| Glutamate racemase [Lactobacillus rhamnosus GG]
gi|259649124|dbj|BAI41286.1| glutamate racemase [Lactobacillus rhamnosus GG]
Length = 484
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
K+ +L VIACNT A LIK L+ + +G + P + A TQ+G I I++
Sbjct: 63 TKHIKML-VIACNTATAAALPLIKARLK-----IPVIGVIKPGSRAALKATQTGHIGIIA 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + + + +++ S VE I + + ++ +
Sbjct: 117 TEGTVKSGAYPKALRAKAPDIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHQD 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246
D +VL CTHYP++ + + + V +D+ LL + +
Sbjct: 177 ----IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVP 232
Query: 247 DHALFLSGKPDI 258
H + +G P +
Sbjct: 233 THTYYTTGAPSM 244
>gi|59801838|ref|YP_208550.1| glutamate racemase [Neisseria gonorrhoeae FA 1090]
gi|239999567|ref|ZP_04719491.1| glutamate racemase [Neisseria gonorrhoeae 35/02]
gi|240014744|ref|ZP_04721657.1| glutamate racemase [Neisseria gonorrhoeae DGI18]
gi|240017192|ref|ZP_04723732.1| glutamate racemase [Neisseria gonorrhoeae FA6140]
gi|240081170|ref|ZP_04725713.1| glutamate racemase [Neisseria gonorrhoeae FA19]
gi|240113384|ref|ZP_04727874.1| glutamate racemase [Neisseria gonorrhoeae MS11]
gi|240116270|ref|ZP_04730332.1| glutamate racemase [Neisseria gonorrhoeae PID18]
gi|240118556|ref|ZP_04732618.1| glutamate racemase [Neisseria gonorrhoeae PID1]
gi|240121267|ref|ZP_04734229.1| glutamate racemase [Neisseria gonorrhoeae PID24-1]
gi|240124100|ref|ZP_04737056.1| glutamate racemase [Neisseria gonorrhoeae PID332]
gi|240126283|ref|ZP_04739169.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679]
gi|254494283|ref|ZP_05107454.1| glutamate racemase [Neisseria gonorrhoeae 1291]
gi|260439916|ref|ZP_05793732.1| glutamate racemase [Neisseria gonorrhoeae DGI2]
gi|268595380|ref|ZP_06129547.1| glutamate racemase [Neisseria gonorrhoeae 35/02]
gi|268597280|ref|ZP_06131447.1| glutamate racemase [Neisseria gonorrhoeae FA19]
gi|268599457|ref|ZP_06133624.1| glutamate racemase [Neisseria gonorrhoeae MS11]
gi|268601935|ref|ZP_06136102.1| glutamate racemase [Neisseria gonorrhoeae PID18]
gi|268604265|ref|ZP_06138432.1| glutamate racemase [Neisseria gonorrhoeae PID1]
gi|268682724|ref|ZP_06149586.1| glutamate racemase [Neisseria gonorrhoeae PID332]
gi|268684866|ref|ZP_06151728.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679]
gi|75432415|sp|Q5F6P9|MURI_NEIG1 RecName: Full=Glutamate racemase
gi|59718733|gb|AAW90138.1| putative glutamate racemase [Neisseria gonorrhoeae FA 1090]
gi|226513323|gb|EEH62668.1| glutamate racemase [Neisseria gonorrhoeae 1291]
gi|268548769|gb|EEZ44187.1| glutamate racemase [Neisseria gonorrhoeae 35/02]
gi|268551068|gb|EEZ46087.1| glutamate racemase [Neisseria gonorrhoeae FA19]
gi|268583588|gb|EEZ48264.1| glutamate racemase [Neisseria gonorrhoeae MS11]
gi|268586066|gb|EEZ50742.1| glutamate racemase [Neisseria gonorrhoeae PID18]
gi|268588396|gb|EEZ53072.1| glutamate racemase [Neisseria gonorrhoeae PID1]
gi|268623008|gb|EEZ55408.1| glutamate racemase [Neisseria gonorrhoeae PID332]
gi|268625150|gb|EEZ57550.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679]
Length = 270
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|282895562|ref|ZP_06303696.1| Glutamate racemase [Raphidiopsis brookii D9]
gi|281199402|gb|EFA74266.1| Glutamate racemase [Raphidiopsis brookii D9]
Length = 292
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 19/255 (7%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E+ ++ I +FDSG+GGL VL+++ +P IY D PYG +K ++
Sbjct: 21 EEIPKSPIGVFDSGVGGLTVLRQVYQQLPNESVIYFGDTAHLPYGIRS----QKEILGYV 76
Query: 69 SDILD--KYQPV-LSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+IL+ + Q V + ++ACNT A TL L FP + + PA K A + I
Sbjct: 77 REILNWMEQQGVKMVIMACNTSSALTLETVRLEYKFPILGMIS--PATKFAVNVGKR--I 132
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++TPAT + I + VS +E+ D +
Sbjct: 133 GVIATPATAKSNAYRQAIMELKPNVQVWQVSCPEFVPLIEQNRL-----HDPYTLAVAKS 187
Query: 184 FIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
++E + D ++ CTHYPL+ + + L P + +D + + R + L +N
Sbjct: 188 YLEPLLAQEIDTLIYGCTHYPLLEPIIKTLIPNHIHLVDPAVHVVRVCQRELEILNIKNH 247
Query: 243 RVFDDHALFLSGKPD 257
+ +SG P
Sbjct: 248 LLPMPTRFVVSGSPQ 262
>gi|299142407|ref|ZP_07035539.1| glutamate racemase [Prevotella oris C735]
gi|298576129|gb|EFI48003.1| glutamate racemase [Prevotella oris C735]
Length = 278
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFS 69
I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + ++ +M LF
Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQAVMKLF- 67
Query: 70 DILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123
+ L ++ CNTA ++ +++L + PS LG + P + T++ +
Sbjct: 68 ----ELGCHLVILGCNTASAKALRSIQRNDLPNLDPSRRVLGVIRPTAEIIGTLTKNNHV 123
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T++ I + + V+ VE + +KK I+
Sbjct: 124 GLLATEGTVKSHSYDLEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRIDEL 183
Query: 184 FIEKEGKRTDVIVLACTHYPLIV 206
+ D I+L CTHYP+++
Sbjct: 184 MLHD--PDIDTIILGCTHYPILM 204
>gi|291043190|ref|ZP_06568913.1| glutamate racemase [Neisseria gonorrhoeae DGI2]
gi|291012796|gb|EFE04779.1| glutamate racemase [Neisseria gonorrhoeae DGI2]
Length = 285
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 22 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 81 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 140
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 141 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 196
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 197 IDTLVLGCTHFPLL 210
>gi|229042717|ref|ZP_04190457.1| Glutamate racemase [Bacillus cereus AH676]
gi|228726657|gb|EEL77874.1| Glutamate racemase [Bacillus cereus AH676]
Length = 265
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 7/238 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA EL+ S+ +G + P + A T+ I ++ T T++
Sbjct: 60 KALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+H + +H + LA+ VE I ++K+ + + D ++
Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENRLEDIAYVTQQVKQ----ALLPLTKEDIDTLI 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 232
>gi|325203563|gb|ADY99016.1| glutamate racemase [Neisseria meningitidis M01-240355]
Length = 270
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL + + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVCALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|240128767|ref|ZP_04741428.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035]
gi|268687151|ref|ZP_06154013.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035]
gi|268627435|gb|EEZ59835.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035]
Length = 270
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + D L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIV-DFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A +AA A T++ I I++T T
Sbjct: 66 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADG---- 181
Query: 192 TDVIVLACTHYPLI 205
D +VL CTH+PL+
Sbjct: 182 IDTLVLGCTHFPLL 195
>gi|257069150|ref|YP_003155405.1| glutamate racemase [Brachybacterium faecium DSM 4810]
gi|256559968|gb|ACU85815.1| glutamate racemase [Brachybacterium faecium DSM 4810]
Length = 270
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 32/203 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ +Y+ D PYG ++ + + +++
Sbjct: 6 IGIFDSGVGGLTVARAVLDQLPQEELVYIGDTAHGPYGPRPIAEVRSLALEIMDELVGHG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR- 134
+L VIACNTA + + R + PA+++A A T++ + +++T T+
Sbjct: 66 VKML-VIACNTASAAVLRDARERYDVPVIEVIQPAVRRAVAATRNRRVGVIATEGTVTSR 124
Query: 135 ------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
T T+ +V +VS + EEY ++E E+
Sbjct: 125 AYEDAFAAAPDLTLTAQACPRFVEFVENGVVSGREVVEMAEEYLA--PVREAEV------ 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
D +VL CTHYP++
Sbjct: 177 ----------DTLVLGCTHYPML 189
>gi|258651923|ref|YP_003201079.1| glutamate racemase [Nakamurella multipartita DSM 44233]
gi|258555148|gb|ACV78090.1| glutamate racemase [Nakamurella multipartita DSM 44233]
Length = 301
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 24/251 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P YV D PYG +++ + + ++D
Sbjct: 40 IGIFDSGVGGLTVARAIIDQLPGERVRYVGDTANGPYGPLPIAEVRRHALAVGDRLVDSG 99
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+L VIACNTA + R + PA+++A A T++G + ++ T AT+
Sbjct: 100 VKIL-VIACNTASAACLADARERYDVPVVEVIRPAVRRAIAATRTGEVGVIGTSATIASG 158
Query: 136 YTSNL--------IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
+ +H+ + V I + R ++ +
Sbjct: 159 AYQDAFDVNPGVRVHAVACPSFVDFVERGITSGR-------------QVIGLAQAYLGPL 205
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVF 245
+ D +VL CTHYPL+ + V + ++D A+ L ++ TR
Sbjct: 206 QRTNLDTLVLGCTHYPLLTGALSLVMGDQVTLVSSADETAKDVYRKLTELDLLAPGTRPS 265
Query: 246 DDHALFLSGKP 256
H +G P
Sbjct: 266 APHEFLATGDP 276
>gi|317474408|ref|ZP_07933682.1| Asp/Glu/Hydantoin racemase [Bacteroides eggerthii 1_2_48FAA]
gi|316909089|gb|EFV30769.1| Asp/Glu/Hydantoin racemase [Bacteroides eggerthii 1_2_48FAA]
Length = 279
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 39/259 (15%)
Query: 9 EKKLQNS---ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
++KL +S I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + +
Sbjct: 2 KQKLPSSPGPIGVFDSGYGGLTILSKIREILPEYDYIYLGDNARAPYGT---RSFEVVYA 58
Query: 66 FLFSDILDKYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117
F + ++ L ++ACNTA ++ ++L + LG + P ++
Sbjct: 59 FTLQAVTRLFEMGCHLVILACNTASAKALRSIQINDLPHLDSARRVLGVIRPTVECIGNI 118
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKED 174
T+S + +L+T T++ S+ + + + +V AC + ++ +
Sbjct: 119 TRSRHVGVLATSGTIK------------SESYPLEIRKLFPDIKVSGEACPLWVSLVENN 166
Query: 175 EIKKEIEGCFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
E + + FI K + + D +L CTHYP+++ +Q P + + +A
Sbjct: 167 EAQGDGTDYFIRKYINELLAKDREIDTAILGCTHYPILLPKIQQYMPAGITIVSQGQLVA 226
Query: 228 RRARCLL---PRINTHQTR 243
+ L P I+ TR
Sbjct: 227 DSLKDYLHRHPEIDIKCTR 245
>gi|323359605|ref|YP_004226001.1| glutamate racemase [Microbacterium testaceum StLB037]
gi|323275976|dbj|BAJ76121.1| glutamate racemase [Microbacterium testaceum StLB037]
Length = 272
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+ D PYG +++ + + ++++
Sbjct: 6 IGIFDSGVGGLTVARAVSQQLPRESILYIGDTARSPYGPKPIADVRRYALEVLDTLVEQG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL- 132
+L VIACNTA + + R + P + +G PA++ A + T++G I ++ T T+
Sbjct: 66 VKML-VIACNTASAAMLRDARERYDVPVVEVIG--PAVRTAMSTTRNGRIGVIGTVGTIG 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R Y L + + +L R E+ E+ E
Sbjct: 123 SRAYQDML------EVNENLTVFAEACPRFVEFVEAGVTDSPEVLATAEQYLAPLRHAGV 176
Query: 193 DVIVLACTHYPLI 205
D +VL CTHYP +
Sbjct: 177 DTLVLGCTHYPFL 189
>gi|261879009|ref|ZP_06005436.1| glutamate racemase [Prevotella bergensis DSM 17361]
gi|270334393|gb|EFA45179.1| glutamate racemase [Prevotella bergensis DSM 17361]
Length = 281
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 17/242 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
Q +I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + ++ + LF
Sbjct: 10 QGAIGVFDSGYGGLTILHGIRRLLPQYDYIYLGDNARAPYGPRSFDVVYEFTRQSVAKLF 69
Query: 69 SDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122
+ L +I CNTA ++ +++L P LG + P + T++
Sbjct: 70 AMGCQ-----LVIIGCNTASAKALRSIQQNDLPQWDPDRRVLGIIRPTAEVIGQLTRNNH 124
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T T++ + I Q + + VE + +KK I+
Sbjct: 125 VGLLATEGTVKSQSYNMEIAKLWPQIQVTGQACPFWVLLVEYNEADSPGADYFVKKRIDQ 184
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D I+L CTH+PL++ ++ V + D +A+ + L R +
Sbjct: 185 LM--QLDPDIDTIILGCTHFPLLMPKIQKYVKPNVRIVPQGDYVAKSLKAYLERHQDMEA 242
Query: 243 RV 244
R+
Sbjct: 243 RL 244
>gi|197693690|gb|ACH71514.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPVVGVIGPSILAIKQQVK-NKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LEILPEVVILGCTHFPLIAH 189
>gi|289434486|ref|YP_003464358.1| hypothetical protein lse_1119 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170730|emb|CBH27270.1| murI [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313633648|gb|EFS00406.1| glutamate racemase [Listeria seeligeri FSL N1-067]
gi|313638209|gb|EFS03457.1| glutamate racemase [Listeria seeligeri FSL S4-171]
Length = 266
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + +++ + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVRQFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ +L VIACNTA ++R+ + +G + P + A T++ I +L T
Sbjct: 61 VDRGIKML-VIACNTATAAALYDIRAKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + ++ S VE EY I KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ D ++L CTHYPL+ + V +++ + A LL
Sbjct: 173 STKIDTVILGCTHYPLLKPIIENFMGDDVAVINSGEETASEVSALL 218
>gi|322434927|ref|YP_004217139.1| glutamate racemase [Acidobacterium sp. MP5ACTX9]
gi|321162654|gb|ADW68359.1| glutamate racemase [Acidobacterium sp. MP5ACTX9]
Length = 271
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 17/197 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG GGL VL+ + L+P ++Y+ D PYG + + + + +L++
Sbjct: 10 TIGVFDSGFGGLTVLRALLPLIPGARYLYLGDTARLPYGAKSQQTIARYALSSAAFLLEQ 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+L V+ACNTA L D+L+ P + +G + P AA+ + +L+T AT++
Sbjct: 70 GIEML-VVACNTATALALDDLKQALP-IPVVGVIAPGTAAAASANADTNVLVLATTATVQ 127
Query: 134 -----RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
R T+ + +Y C +L VEE + + ++ + +E
Sbjct: 128 SGAYTRACTALGLTAYEKACP-------LLVPLVEEGWIDHPVTAEVLRIYLTEAL--EE 178
Query: 189 GKRTDVIVLACTHYPLI 205
++L CTHYPL+
Sbjct: 179 APNATTLLLGCTHYPLL 195
>gi|300172982|ref|YP_003772148.1| glutamate racemase/Nucleoside-triphosphatase [Leuconostoc
gasicomitatum LMG 18811]
gi|299887361|emb|CBL91329.1| Glutamate racemase/Nucleoside-triphosphatase [Leuconostoc
gasicomitatum LMG 18811]
Length = 486
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL V+++ + +P FI++ D PYG + + + ++
Sbjct: 4 NNPIGMIDSGVGGLTVIKEAQKQLPNEQFIFIGDTARMPYGPRTTDEVIAYTFQMANYLI 63
Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Q + VIACNT A T+++ +L T P + + P + A T++ I I++T
Sbjct: 64 TEKQIKMLVIACNTATACALTVLQKKL--TIPVIGVI--QPGAQAAQLATKNKTIGIIAT 119
Query: 129 PATLRRTYTSNLIHSY------VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
T+ IH Y +SQ V ++ A++ +++A + +
Sbjct: 120 DGTVNSKAYELQIHQYGADTKVLSQGEPDFV-QLVEANKYQDHAT---------RDIVMN 169
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS-DSIARRARCL 233
+ D ++L CTH+PL+ R+ + +D+ ++I +CL
Sbjct: 170 HLAPFKAAGIDTLILGCTHFPLLEPFIREAVGKQITLIDSGRETIYAIKQCL 221
>gi|289422435|ref|ZP_06424278.1| glutamate racemase [Peptostreptococcus anaerobius 653-L]
gi|289157007|gb|EFD05629.1| glutamate racemase [Peptostreptococcus anaerobius 653-L]
Length = 268
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 31/245 (12%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSG+GGL VL+++ + +Y D PYG + K
Sbjct: 1 MDNRP--------IGVFDSGLGGLTVLREIHKRLANEDTVYFGDTARVPYGPRSKETIIK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSG 121
F + L + VIACNTA +E ++ + ++ +G + A + A YT +
Sbjct: 53 -YTFQAINFLIQQDVKAIVIACNTATARALEEAKAEY-NVPIIGVIEAGARSAVEYTNNK 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKK 178
++ ++ T T+ S+ +++ + SM + RV + AC + ++E +
Sbjct: 111 VVGVIGTLGTIN------------SKAYVNTIRSMDESIRVIDKACPLFVPLVEEGWANE 158
Query: 179 EIEGC-----FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
EI E K D IVL CTHYP++ + ++ + A + +
Sbjct: 159 EISSTAAHMYLDELVEKGVDSIVLGCTHYPILKRTIGMAVGQEIKLINPAKETALELKEI 218
Query: 234 LPRIN 238
L + N
Sbjct: 219 LNQAN 223
>gi|89067791|ref|ZP_01155245.1| Glutamate racemase [Oceanicola granulosus HTCC2516]
gi|89046761|gb|EAR52816.1| Glutamate racemase [Oceanicola granulosus HTCC2516]
Length = 270
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 48/224 (21%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70
++ IFDSG+GGL VL+ ++ +PE F+Y+AD PYG + + + LF
Sbjct: 2 AVGIFDSGLGGLTVLEAVQKRLPEVPFVYMADSAHAPYGVRDADDIYDLTTASVARLFEA 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121
D L+++ACNTA ++ ++ P+ LG + +A Q G
Sbjct: 62 GCD-----LAILACNTASAAALRRMQESWVPPNKRVLGVFVPLIEALTERQWGDNSPPRE 116
Query: 122 ----LISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-------- 168
+++ +TPAT+R R + L + VE ACG
Sbjct: 117 VAVKHVALFATPATVRARAFQRELAFRAIG-------------VDVEAQACGGVVDAIEE 163
Query: 169 --IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ + E ++ ++ ++ D VL CTHYPL+ VF+
Sbjct: 164 GDMILAEALVRSHVDALL--RKMPEPDAAVLGCTHYPLMAEVFQ 205
>gi|220903374|ref|YP_002478686.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867673|gb|ACL48008.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 311
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 27/248 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL+ + +P +Y+ D PYG + + + ++D
Sbjct: 9 VGLFDSGMGGLTVLKALNHRLPGEDLLYLGDTARLPYGTKGPDTIVRYTLKAAQKLVDMG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+L V+ACNTA LR F + LG V P + AA +++G I +L T AT+
Sbjct: 69 VKML-VVACNTATAAALPALRQHFAPLPVLGVVEPGAQAAAQASRNGHIVVLGTEATING 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG--CFIEKEGK-- 190
I + + + + EE + E ++ +EG C + G
Sbjct: 128 GAYQQAIARIRPEAVVLGRACNLFVPLAEEGWMDGPLVEGVARRYLEGFFCAPDTNGANG 187
Query: 191 ---------------------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ D ++L CTHYPL+ R + V +D++ A+
Sbjct: 188 SNDAASTAQPRAAAGAANAPVQPDTLLLGCTHYPLLQGALRHVVGPDVRIVDSAAITAQV 247
Query: 230 ARCLLPRI 237
L R+
Sbjct: 248 VAGELARL 255
>gi|57866660|ref|YP_188316.1| glutamate racemase [Staphylococcus epidermidis RP62A]
gi|242242450|ref|ZP_04796895.1| glutamate racemase [Staphylococcus epidermidis W23144]
gi|71151977|sp|Q5HQ24|MURI_STAEQ RecName: Full=Glutamate racemase
gi|57637318|gb|AAW54106.1| glutamate racemase [Staphylococcus epidermidis RP62A]
gi|242234100|gb|EES36412.1| glutamate racemase [Staphylococcus epidermidis W23144]
gi|319401537|gb|EFV89747.1| glutamate racemase [Staphylococcus epidermidis FRI909]
Length = 267
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 9/246 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +KK L +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKKFTTELAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + D L++ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALDYLQNILP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189
T++ I +++ V+ VE+ ++ K+ I I +
Sbjct: 119 TIKSEAYRTHIKKINPNVNVYSVACPGFVPLVEQ----MRYKDPTITNIVIHQTLKQWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
D ++L CTHYPL+ + + + AR LL N H + H
Sbjct: 175 SDADTVILGCTHYPLLYQPIYEYFSGTKTVISSGLETAREVSALLTFSNEHASYTEHPQH 234
Query: 249 ALFLSG 254
F +G
Sbjct: 235 RFFATG 240
>gi|333022620|ref|ZP_08450684.1| putative glutamate racemase [Streptomyces sp. Tu6071]
gi|332742472|gb|EGJ72913.1| putative glutamate racemase [Streptomyces sp. Tu6071]
Length = 260
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 82/194 (42%), Gaps = 17/194 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDI-TRLALGAAEAAAAL 61
Query: 76 QPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+P VIACNTA T LR+ TFP +G VPAIK AAA+ ++I +TPAT
Sbjct: 62 EPDALVIACNTASTHALPALRARFEDTFP---VIGTVPAIKPAAAFGAP--VAIWATPAT 116
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
Y LI + ++ V+ LA V+ +
Sbjct: 117 TGSEYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADAAARTPAGVR----- 171
Query: 192 TDVIVLACTHYPLI 205
V+VL CTHY L+
Sbjct: 172 --VVVLGCTHYELV 183
>gi|282877118|ref|ZP_06285960.1| glutamate racemase [Prevotella buccalis ATCC 35310]
gi|281300800|gb|EFA93127.1| glutamate racemase [Prevotella buccalis ATCC 35310]
Length = 279
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG + ++ ++ LF
Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGTRSFDVVYEFTRQAVVKLFEMG 70
Query: 72 LDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
L ++ CNTA T+ + +L S + LG + P + + T+S + +
Sbjct: 71 CH-----LVILGCNTASAKALRTIQQHDLPSLDSNRRVLGVIRPTAEVIGSLTKSRHVGL 125
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T++ I + + ++ VE + +KK ++ +
Sbjct: 126 LATEGTVKSESYQLEIQKFFPDIQVSGIACPFWVPLVEYNEADSPGADYFVKKRLDA--L 183
Query: 186 EKEGKRTDVIVLACTHYPLIV 206
++ D I+L CTHYPL++
Sbjct: 184 AQKDPLIDTIILGCTHYPLLM 204
>gi|216263947|ref|ZP_03435941.1| glutamate racemase [Borrelia afzelii ACA-1]
gi|215979991|gb|EEC20813.1| glutamate racemase [Borrelia afzelii ACA-1]
Length = 261
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 22/199 (11%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPE-YHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++FL
Sbjct: 2 KNFKEVIIVFDSGIGGLSYFKYIKSKVEGGYQYVYVADNKNFPYGEKSSEYLLEAVLFLI 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y ++ACNT + ++L FP + L V +I A + +++T
Sbjct: 62 EKLKKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSSISDLAL----KRVLLIAT 117
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGC 183
TL + + Q ++H +I+ + E EY G K K+D ++ +E
Sbjct: 118 NTTLESKFVKD-------QVNMH--EDLIVKAAGELVNFVEY--GKKYKKDALRC-LEAL 165
Query: 184 FIEKEGKRTDVIVLACTHY 202
E +++ L CTHY
Sbjct: 166 KSEVVNTGREIVFLGCTHY 184
>gi|217033496|ref|ZP_03438925.1| hypothetical protein HP9810_905g15 [Helicobacter pylori 98-10]
gi|216944021|gb|EEC23452.1| hypothetical protein HP9810_905g15 [Helicobacter pylori 98-10]
Length = 255
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT+R N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQ-------LSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAHQIESYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CTFPKVEFHAS 239
>gi|300725872|ref|ZP_07059336.1| glutamate racemase [Prevotella bryantii B14]
gi|299776860|gb|EFI73406.1| glutamate racemase [Prevotella bryantii B14]
Length = 280
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + F +L +
Sbjct: 11 IGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYGI---RSFDVVYQFTRQAVLKMF 67
Query: 76 QP--VLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
Q L ++ CNTA ++ + +L PS LG + P + T S + +L+
Sbjct: 68 QMGCQLVILGCNTASAKALRSIQQRDLPELDPSRRVLGVIRPTAEIIGNLTSSRHVGLLA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ I + V+ VE + +KK ++ ++
Sbjct: 128 TEGTIKSQSYDIEIKKLFPDIQVSGVACPFWVPLVEYNEMDSPGADYFVKKRVDELMLKD 187
Query: 188 EGKRTDVIVLACTHYPLIV-HVFRQLSP 214
K D I+L CTH+PL++ + + +SP
Sbjct: 188 --KDIDAIILGCTHFPLLMPKIIKYVSP 213
>gi|296268925|ref|YP_003651557.1| glutamate racemase [Thermobispora bispora DSM 43833]
gi|296091712|gb|ADG87664.1| glutamate racemase [Thermobispora bispora DSM 43833]
Length = 277
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 14/247 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I IFDSG+GGL V + + +P YVAD PYG +++ + + D L
Sbjct: 3 SGAIGIFDSGVGGLTVARAIIDQLPNESIFYVADTARQPYGPKPIAKVREYALEVM-DHL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++ + VIACN+A + + R + PA+++A T++ + ++ T AT+
Sbjct: 62 VEHEVKMLVIACNSASAAVLRDARERYSVPVVEVIQPAVRRAVRVTKNRKVGVIGTRATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ ++ + I LV+ + A + E+ + E+ + I G
Sbjct: 122 ESMAYHD---AFAAAPDIELVA--VAAPLLVEFVERGETMSKELIEVIRGYLKPILDAGC 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR--INT-----HQTRV 244
D ++L CTHYPL+ ++ V + +++ A+ R L R N H+ R
Sbjct: 177 DTLILGCTHYPLLTGAISYVAGDGVTLVSSAEETAKDVYRILHDRGMFNAEAEPFHRFRA 236
Query: 245 FDDHALF 251
D ALF
Sbjct: 237 TGDTALF 243
>gi|171911183|ref|ZP_02926653.1| glutamate racemase [Verrucomicrobium spinosum DSM 4136]
Length = 271
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 25/235 (10%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK----RLMFLFSDILD 73
+FDSG+GGL V++ + L+P IY+ D PYG+ ++K FL S +
Sbjct: 12 VFDSGVGGLTVVRALLDLLPNESIIYLGDTARVPYGSKSPDTIRKFSVEDTQFLLSKGVK 71
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
V+ACNTA +LR F P + L P ++ A + I+ T T
Sbjct: 72 AV-----VVACNTATAHALPQLRQMFRVPVVGVLE--PGVEATLADPACQRVGIIGTAGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE----YACGIKIKEDEIKKEIEGCFIEK 187
++ + + I+ ++ +L VEE + + + +K ++
Sbjct: 125 IKSHAYQHELAMRRPDLQIYAEATPLLVPLVEEDWIDHPATKMVLREYLKPMLD------ 178
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
K D +VL CTHYPL+ + +++ V +D++ + A + +L +T
Sbjct: 179 --KGMDTLVLGCTHYPLLKPLLKRILNNKVRMVDSALTCAEHVKRMLAEQGLERT 231
>gi|153811627|ref|ZP_01964295.1| hypothetical protein RUMOBE_02019 [Ruminococcus obeum ATCC 29174]
gi|149832368|gb|EDM87453.1| hypothetical protein RUMOBE_02019 [Ruminococcus obeum ATCC 29174]
Length = 273
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 23/236 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILD 73
I +FDSG+GGL V +++ +P +Y D PYG+ + + R + F L
Sbjct: 9 IGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSRDTVIRYSRQIIHF---LK 65
Query: 74 KYQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Q VIACNT AF L + P + +GA K AA T + + ++ T T
Sbjct: 66 EQQAKAIVIACNTASAFALDAVQHEQDIPVLGVIGA--GAKVAAEETVNKRVGVIGTVGT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLV----SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
+ S + +Y+ + + + + VEE D + E+ ++++
Sbjct: 124 V----GSGIHEAYLKKLDPEITVIGKACPLFVPLVEEGWL-----HDPVTVEVANRYLQE 174
Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ K D ++L CTHYPLI R++ V ++ + A + LL + N T
Sbjct: 175 LKDKDVDTLILGCTHYPLIRSTIREVMGEKVRLVNPAYETALELKNLLQKTNMLST 230
>gi|226320707|ref|ZP_03796265.1| glutamate racemase [Borrelia burgdorferi 29805]
gi|226233923|gb|EEH32646.1| glutamate racemase [Borrelia burgdorferi 29805]
Length = 305
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKK 178
+++T TL + + Q +IH + +I+ + E EY G K+D ++
Sbjct: 156 LLIATNTTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC 204
Query: 179 EIEGCFIEKEGKRTDVIVLACTHY 202
+E E +++ L CTHY
Sbjct: 205 -LEALKFEVVNTGREIVFLGCTHY 227
>gi|221217513|ref|ZP_03588984.1| glutamate racemase [Borrelia burgdorferi 72a]
gi|221192791|gb|EEE19007.1| glutamate racemase [Borrelia burgdorferi 72a]
Length = 305
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKK 178
+++T TL + + Q +IH + +I+ + E EY G K+D ++
Sbjct: 156 LLIATNTTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC 204
Query: 179 EIEGCFIEKEGKRTDVIVLACTHY 202
+E E +++ L CTHY
Sbjct: 205 -LEALKFEVVNTGREIVFLGCTHY 227
>gi|229143571|ref|ZP_04271996.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|296501581|ref|YP_003663281.1| glutamate racemase [Bacillus thuringiensis BMB171]
gi|228639927|gb|EEK96332.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|296322633|gb|ADH05561.1| glutamate racemase [Bacillus thuringiensis BMB171]
Length = 276
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 7/240 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA EL+ S+ +G + P + A T+ I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+H + +H + LA+ VE I ++K+ + + D
Sbjct: 128 NMYEKALHELDTYLEVHSHACPNLATVVENRLEDIAYVTQQVKQ----ALLPLTKEDIDT 183
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 184 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 243
>gi|209966583|ref|YP_002299498.1| glutamate racemase [Rhodospirillum centenum SW]
gi|209960049|gb|ACJ00686.1| glutamate racemase [Rhodospirillum centenum SW]
Length = 280
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 20/231 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+ + +P F+Y+ D PYGN + L + L
Sbjct: 2 IGVFDSGHGGLTVLRALVDALPGRSFVYLGDHAHAPYGNRTPEEIYG-LTVAAVERLFAQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTF---------------PSMAFLGAVPAIKQAAAYTQS 120
L V+ACNTA L L+ T+ P + + VP + A +
Sbjct: 61 GCRLVVLACNTASALALRRLQQTWLPCHHPDRRVLGVLVPMVEAITGVPWMADIPAGRHA 120
Query: 121 G---LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
G ++I +T T++ I + + + LA +EE A +I+ ++
Sbjct: 121 GEPRSVAIFATRRTVQSQAYPREIGKRAPEVEVVQQACPDLARLIEEDAPEAEIRR-AVR 179
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ + E ++L CTHYPL+ F P VD LD AR
Sbjct: 180 RYTASLMDKLEHGTPSAVMLGCTHYPLVAGEFAAALPAGVDVLDQPALCAR 230
>gi|239782122|pdb|3HFR|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes
gi|239782123|pdb|3HFR|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes
gi|259090342|pdb|3IST|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Succinic Acid
gi|259090343|pdb|3IST|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Succinic Acid
gi|259090345|pdb|3ISV|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Acetate Ion
gi|259090346|pdb|3ISV|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Acetate Ion
Length = 269
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 108/272 (39%), Gaps = 26/272 (9%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V++++ +P Y+ D PYG + + K + ++
Sbjct: 5 KQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEXTNFLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
D+ L VIACNTA ++R + +G + P + A T++ I +L T T
Sbjct: 65 DRGIKXL-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLGT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + ++ S VE EY I KK + + +
Sbjct: 123 VESXAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLKS 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN----------- 238
+ D ++L CTHYPL+ + V +++ + A LL N
Sbjct: 177 TKIDTVILGCTHYPLLKPIIENFXGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEH 236
Query: 239 ----THQTRVFDDHALFLSGKPDIAMRRLMQG 266
T T++F D A PD + + G
Sbjct: 237 RFFTTGSTQIFKDIAKDWLNXPDXTVEHIKLG 268
>gi|310778213|ref|YP_003966546.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
gi|309747536|gb|ADO82198.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
Length = 270
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL V+++++ ++P Y D PYG+ + + + ++ L
Sbjct: 3 NRGIGVFDSGFGGLTVVKEIKKVLPGEKIYYFGDTARLPYGSKSKENIIHYSLEI-AEFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
V+ACNTA DEL+ +FP + + A ++A T++G + I+ T
Sbjct: 62 KTKDIKALVVACNTASAFALDELKKHCSFPVIGVIEA--GSRRALGITKNGKVGIIGTKG 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + ++ + VEE + +DE+ + + ++ +
Sbjct: 120 TVSSGVYDRSLSKGRKGIEVYSKPCPLFVPLVEE-----GMVQDEVTEIMIDRYLREFKN 174
Query: 191 RTDVIVLACTHYPLI 205
+ D +++ CTHYPL+
Sbjct: 175 KVDSLIMGCTHYPLL 189
>gi|315282014|ref|ZP_07870520.1| glutamate racemase [Listeria marthii FSL S4-120]
gi|313614341|gb|EFR87979.1| glutamate racemase [Listeria marthii FSL S4-120]
Length = 266
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 111/273 (40%), Gaps = 26/273 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVARFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ +L VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + ++ S VE EY I KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLK 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------- 238
D ++L CTHYPL+ + V +++ + A LL N
Sbjct: 173 STNIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIE 232
Query: 239 -----THQTRVFDDHALFLSGKPDIAMRRLMQG 266
T T++F D A PD+ + + G
Sbjct: 233 HRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLG 265
>gi|217967731|ref|YP_002353237.1| glutamate racemase [Dictyoglomus turgidum DSM 6724]
gi|217336830|gb|ACK42623.1| glutamate racemase [Dictyoglomus turgidum DSM 6724]
Length = 265
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRF--LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I I DSG+GGL VL+++ L E +F+ D FPYG +++R+ + S
Sbjct: 2 SKIGILDSGVGGLSVLKEVYLNNLADEVYFL--GDTKYFPYGIKPVEFIQERVFEIVS-F 58
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+IACNTA ++ D L+ F + V + A ++ I +L+T T
Sbjct: 59 FKSLGVEEVIIACNTASSVAYDFLKDRFRDLKIHSIVLGAIEGAKNYKAKKIGVLATRRT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ LIH +S V S +E GI ++ + I+KEI C K
Sbjct: 119 MESNIYPRLIHEKISDKIEVYVQSCSEGPLLETIEKGI-VEGELIEKEIMRCIDPLVEKN 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
+ ++L CTH P + V + L P
Sbjct: 178 IEGLILGCTHLPFVKKVIKDLYP 200
>gi|282863002|ref|ZP_06272062.1| Glutamate racemase [Streptomyces sp. ACTE]
gi|282561984|gb|EFB67526.1| Glutamate racemase [Streptomyces sp. ACTE]
Length = 256
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 82/196 (41%), Gaps = 17/196 (8%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L +R L P+ + +D P+G + +R + + V
Sbjct: 1 MDSGIGLLAAAAAVRRLRPDADLVLSSDPASMPWGPLTPEGVTERALAVARAAAAHRPDV 60
Query: 79 LSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L ++ACNT A ++DEL P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 61 L-IVACNTASVHALPTLRDELE---PALPVVGTVPAIKPAAA--GGGPVAIWATPATTGS 114
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + S + V LA VE ++ T
Sbjct: 115 PYQRGLIEDFASHVDVTEVPCPGLADAVEH-------ADEAAIDRAVAAAAALTPPGTAG 167
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 168 VVLGCTHYELVAERIR 183
>gi|282901288|ref|ZP_06309214.1| Glutamate racemase [Cylindrospermopsis raciborskii CS-505]
gi|281193783|gb|EFA68754.1| Glutamate racemase [Cylindrospermopsis raciborskii CS-505]
Length = 285
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 19/250 (7%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL VL+++ +P IY D PYG +K ++ +IL+
Sbjct: 23 SPIGVFDSGVGGLTVLRQVYQQLPNESVIYFGDTAHLPYGIRS----QKEILGYVREILN 78
Query: 74 --KYQPV-LSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Q V + ++ACNT A TL L FP + + PA K A + I +++T
Sbjct: 79 WMEQQGVKMVIMACNTSSALTLETVRLEYKFPILGMIS--PATKFAVNVGKR--IGVIAT 134
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK- 187
PAT + I + VS +E+ D + ++E
Sbjct: 135 PATAKSNAYRQAIMELKVNVQVWQVSCPEFVPLIEQNRL-----HDPYTLAVAKSYLEPL 189
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D ++ CTHYPL+ + + L P + +D + + R + L +N +
Sbjct: 190 LAQEIDTLIYGCTHYPLLEPIIKTLIPNHIHLVDPAVHVVRVCQRELEILNIKNRLLPMP 249
Query: 248 HALFLSGKPD 257
+SG P
Sbjct: 250 TRFVVSGSPQ 259
>gi|238853843|ref|ZP_04644208.1| glutamate racemase [Lactobacillus gasseri 202-4]
gi|311111115|ref|ZP_07712512.1| glutamate racemase [Lactobacillus gasseri MV-22]
gi|238833538|gb|EEQ25810.1| glutamate racemase [Lactobacillus gasseri 202-4]
gi|311066269|gb|EFQ46609.1| glutamate racemase [Lactobacillus gasseri MV-22]
Length = 266
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 43/264 (16%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ K+
Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRS----KE 48
Query: 63 RLMFLFSD----ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117
++ L D +L K ++ + CNTA + ++ P + +G V + AAA
Sbjct: 49 EIISLTRDSVNFLLSKDVKII-IFGCNTATAVAMSTIKKEIP-LQIIGVVQSGALAAART 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--- 174
T++ ++++ T AT+ HSY+ + I I S + +ED
Sbjct: 107 TETKNVAVIGTKATVNS-------HSYLKE--IQYRDPKIQVSEFAQPKLAPLAEEDPAE 157
Query: 175 EIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
EIK+ + + K D +VL CTHYPL+ + +D +D +A+ +
Sbjct: 158 EIKQAVVSESLAPLKKADYDTLVLGCTHYPLLRKEIVAVVGQDRKIVDPADQVAQYTYNV 217
Query: 234 LPRINTHQTRVFDDHALFLSGKPD 257
L R LF +G D
Sbjct: 218 LRR-----------DGLFAAGNSD 230
>gi|224534028|ref|ZP_03674612.1| glutamate racemase [Borrelia burgdorferi CA-11.2a]
gi|224512864|gb|EEF83231.1| glutamate racemase [Borrelia burgdorferi CA-11.2a]
Length = 305
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPKYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKK 178
+++T TL + + Q +IH + +I+ + E EY G K+D ++
Sbjct: 156 LLIATNTTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC 204
Query: 179 EIEGCFIEKEGKRTDVIVLACTHY 202
+E E +++ L CTHY
Sbjct: 205 -LEALKFEVVNTGREIVFLGCTHY 227
>gi|302523482|ref|ZP_07275824.1| glutamate racemase [Streptomyces sp. SPB78]
gi|302432377|gb|EFL04193.1| glutamate racemase [Streptomyces sp. SPB78]
Length = 260
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 82/194 (42%), Gaps = 17/194 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDI-TRLALGAAEAAAAL 61
Query: 76 QPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+P V+ACNTA T LR+ TFP +G VPAIK AAA+ ++I +TPAT
Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFP---VIGTVPAIKPAAAFGAP--VAIWATPAT 116
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
Y LI + ++ V+ LA V+ +
Sbjct: 117 TGSEYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADAAARTPAGVR----- 171
Query: 192 TDVIVLACTHYPLI 205
V+VL CTHY L+
Sbjct: 172 --VVVLGCTHYELV 183
>gi|148242257|ref|YP_001227414.1| glutamate racemase [Synechococcus sp. RCC307]
gi|147850567|emb|CAK28061.1| Glutamate racemase [Synechococcus sp. RCC307]
Length = 292
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 9/214 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q + +FDSG+GGL VL+++ P +YV D PYG+ D A + + L
Sbjct: 28 QALLGLFDSGLGGLTVLRRLLSQRPGQRCVYVGDTARVPYGS-RDRAEIRCIAAEVVGWL 86
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNT L D +S + LG + A+ A Q I +L+T AT
Sbjct: 87 REQGAEAVVMACNTTNALALDVAQSEA-GVPVLGLIDAV---ARQVQQQRIGVLATEATA 142
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + I + VE + ++ +E R
Sbjct: 143 SSGAYGRALQAQRQGLTIVEMGCPAFVPAVEAHQLDTPALRRAAQRYLEPLL----DARV 198
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
+ IVL C+HYPL+ + R L P V+ +D + ++
Sbjct: 199 EAIVLGCSHYPLLEPMLRDLLPAGVELIDPAHAL 232
>gi|318059525|ref|ZP_07978248.1| glutamate racemase [Streptomyces sp. SA3_actG]
Length = 260
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 82/194 (42%), Gaps = 17/194 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDI-TRLALGAAEAAAAL 61
Query: 76 QPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+P V+ACNTA T LR+ TFP +G VPAIK AAA+ ++I +TPAT
Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFP---VIGTVPAIKPAAAFGAP--VAIWATPAT 116
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
Y LI + ++ V+ LA V+ +
Sbjct: 117 TGSEYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADAAARTPAGVR----- 171
Query: 192 TDVIVLACTHYPLI 205
V+VL CTHY L+
Sbjct: 172 --VVVLGCTHYELV 183
>gi|224534952|ref|ZP_03675521.1| glutamate racemase [Borrelia spielmanii A14S]
gi|224513892|gb|EEF84217.1| glutamate racemase [Borrelia spielmanii A14S]
Length = 260
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 2 KNFKEVIIIFDSGIGGLSYFEYIKSKLGGCQYVYVADNKNFPYGKKSPEYLLEAVLFLIE 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ Y ++ACNT + ++L FP + L V + A + +++T
Sbjct: 62 RLKKIYNVSALILACNTISVSVYNKLNFVFPVVYTLPEVSLVSDLAL----KRVLLIATN 117
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184
TL + + Q ++H + +I+ + E EY G K K+D ++ +E
Sbjct: 118 TTLESKFVKD-------QVNMH--NDLIVKAAGELVNFVEY--GKKYKKDALRC-LEALK 165
Query: 185 IEKEGKRTDVIVLACTHY 202
E +++ L CTHY
Sbjct: 166 SEVVNTGREIVFLGCTHY 183
>gi|257066004|ref|YP_003152260.1| glutamate racemase [Anaerococcus prevotii DSM 20548]
gi|256797884|gb|ACV28539.1| glutamate racemase [Anaerococcus prevotii DSM 20548]
Length = 250
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 9/206 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ +F Y D + PYG + L+ R D L+K+
Sbjct: 4 IGVFDSGLGGLTVLRELAKTNKSQYF-YFGDSLRVPYGGRSEEELR-RFSADIVDFLEKF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNT + D LR + A+K + Y G +L T T+
Sbjct: 62 DIDYYVIACNTLSVTVTDFLREKYDKKFIPITELALKASEKY--QGKFLVLGTKTTINSH 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ N + + ++ V++ L +E K + ++ + I+ K+ + I
Sbjct: 120 FYKNNLEKN-PRNTVYEVAASKLVDLIE----ADKKDDKKLNEYIDSYIKIANDKKIENI 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLD 221
+LACTHYP+I + + + +D
Sbjct: 175 LLACTHYPIIRENIERRLDYKANIID 200
>gi|119899045|ref|YP_934258.1| glutamate racemase [Azoarcus sp. BH72]
gi|119671458|emb|CAL95371.1| glutamate racemase [Azoarcus sp. BH72]
Length = 271
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 6/224 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + SI +FDSGIGGL V++ + +P + IY D PYG + A ++
Sbjct: 3 ADARASRSIGVFDSGIGGLTVVRALMERLPFENIIYFGDTARVPYG-VKSVATIEQFTAQ 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126
+D L + + ++ACNT + + + + L + + A A + G I ++
Sbjct: 62 ITDFLLQQDVKMLIVACNTMAAVAAHIVAARAGGIPVLDVIEAGARAAVAASPGGRIGVI 121
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
TP T+ + IH + ++ + + VEE + ++ + E
Sbjct: 122 GTPTTVNSNAYARRIHELDAGARVYSQACPLFVPLVEEGWLDHPVTRMTAQEYLRPVLAE 181
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ D +VL CTHYPL+ + R ++ V +D++ + A A
Sbjct: 182 E----VDSLVLGCTHYPLLKPLLRDVAGPGVKLIDSALTTAELA 221
>gi|317057059|ref|YP_004105526.1| glutamate racemase [Ruminococcus albus 7]
gi|315449328|gb|ADU22892.1| glutamate racemase [Ruminococcus albus 7]
Length = 273
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 26/238 (10%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ NS I +FDSG+GGL ++++ L+P +Y+ D PYG + R +
Sbjct: 1 MNNSPIGVFDSGVGGLTCVKELTKLLPHEDIVYLGDTARVPYGTRSKETI-ARYTAQDME 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELR---STFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
L + + ++AC TA ++I +T PS + G V PA A A T++G I ++
Sbjct: 60 FLRGHDVKMILVACGTASSVIMSSPEFSGNTEPS--YSGVVKPAANAACAATKNGRIGVI 117
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-IKEDEIKKEIEGCFI 185
+T AT+R +I S + + + VE G I +E C
Sbjct: 118 ATGATIRSGSYGKVIRSIDPDAKVIGKACPMFVPLVENGYVGKDCIPTRYFAEEYLECMK 177
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFR--------------QLSPWPVDWLDNSDSIARR 229
++ D ++L CTHYPL+ + +L+ + V L SDS+A R
Sbjct: 178 REQ---VDTLILGCTHYPLLADLISDIMGDGVKLISAGAELARFAVKTLTFSDSLADR 232
>gi|225175994|ref|ZP_03729986.1| glutamate racemase [Dethiobacter alkaliphilus AHT 1]
gi|225168582|gb|EEG77384.1| glutamate racemase [Dethiobacter alkaliphilus AHT 1]
Length = 267
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 15/236 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG GGL VL +P F+Y D PYG+ ++ L +++L +
Sbjct: 11 IGFFDSGAGGLTVLASAVKCLPNESFLYFGDTAHAPYGSRPVEDVRN-LSVQAAEMLCRQ 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + LR P + +G PA+K A A G + +++TP TL+
Sbjct: 70 GCKALVVACNTATSAAVHVLREMLP-IPVIGMEPAVKPALA--GGGKVLVMATPLTLKEE 126
Query: 136 YTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L + ++ ++ L VE + + +++ + F +
Sbjct: 127 KFKALCDRCGADESNVIVLPCPGLVEMVERG----ETEGPAVERALAQLFAGADLTGVSA 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLD-NSDSIARRARC-----LLPRINTHQTRV 244
+VL CTHY + + P V ++D N ++ + AR LL T QT V
Sbjct: 183 VVLGCTHYLFLRRALAGILPADVKFVDGNLGTVKQLARILKKEGLLREEKTSQTNV 238
>gi|149194034|ref|ZP_01871132.1| glutamate racemase [Caminibacter mediatlanticus TB-2]
gi|149135987|gb|EDM24465.1| glutamate racemase [Caminibacter mediatlanticus TB-2]
Length = 245
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL V +++ IY D PYGN + + R + L +
Sbjct: 6 IFDSGVGGLSVAREILKSKLFDEIIYFGDTARVPYGNKNESTII-RYSLECLEFLKNFNI 64
Query: 78 VLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACN+A ++ +ELR +FP + + A IK ++ I ++ T T+ +
Sbjct: 65 DFLVVACNSASSVAIEELRKEVSFPVVGVIEA--GIKAIENENKNSNILLIGTKRTISSS 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
N + S + +I +++ +L VEE KI +D E F + ++ D+I
Sbjct: 123 KYQNALIS-LGFKNIISIATPLLVPLVEEGIVEGKIVDDIF----EMYFRNLDKEKIDII 177
Query: 196 VLACTHYPLIVHVFRQLSP 214
+L CTHYP + F++ P
Sbjct: 178 ILGCTHYPFLEKSFKKHFP 196
>gi|116629100|ref|YP_814272.1| glutamate racemase [Lactobacillus gasseri ATCC 33323]
gi|116094682|gb|ABJ59834.1| glutamate racemase [Lactobacillus gasseri ATCC 33323]
Length = 283
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 43/264 (16%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ K+
Sbjct: 18 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRS----KE 65
Query: 63 RLMFLFSD----ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117
++ L D +L K ++ + CNTA + ++ P + +G V + AAA
Sbjct: 66 EIISLTRDSVNFLLSKDVKII-IFGCNTATAVAMSTIKKEIP-LQIIGVVQSGALAAART 123
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--- 174
T++ ++++ T AT+ HSY+ + I I S + +ED
Sbjct: 124 TETKNVAVIGTKATVNS-------HSYLKE--IQYRDPKIQVSEFAQPKLAPLAEEDPAE 174
Query: 175 EIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
EIK+ + + K D +VL CTHYPL+ + +D +D +A+ +
Sbjct: 175 EIKQAVVSESLAPLKKADYDTLVLGCTHYPLLRKEIVAVVGQDRKIVDPADQVAQYTYNV 234
Query: 234 LPRINTHQTRVFDDHALFLSGKPD 257
L R LF +G D
Sbjct: 235 LRR-----------DGLFAAGNSD 247
>gi|197693736|gb|ACH71537.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D Y
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPY 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQIK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 173 LPEVVILGCTHFPLIAH 189
>gi|258451847|ref|ZP_05699868.1| glutamate racemase [Staphylococcus aureus A5948]
gi|257860455|gb|EEV83282.1| glutamate racemase [Staphylococcus aureus A5948]
Length = 266
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 17/252 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ I I + K
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYS--------DPTITSIVIHQTLK 170
Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV- 244
R +D ++L CTHYPL+ + + AR LL N H +
Sbjct: 171 RWCNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTE 230
Query: 245 FDDHALFLSGKP 256
DH F +G P
Sbjct: 231 HPDHRFFATGDP 242
>gi|15924141|ref|NP_371675.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50]
gi|15926734|ref|NP_374267.1| glutamate racemase [Staphylococcus aureus subsp. aureus N315]
gi|21282762|ref|NP_645850.1| glutamate racemase [Staphylococcus aureus subsp. aureus MW2]
gi|49485988|ref|YP_043209.1| glutamate racemase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57650260|ref|YP_186024.1| glutamate racemase [Staphylococcus aureus subsp. aureus COL]
gi|87161415|ref|YP_493747.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194852|ref|YP_499650.1| glutamate racemase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148267642|ref|YP_001246585.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH9]
gi|150393697|ref|YP_001316372.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH1]
gi|151221275|ref|YP_001332097.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979472|ref|YP_001441731.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu3]
gi|161509325|ref|YP_001574984.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221140452|ref|ZP_03564945.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317067|ref|ZP_04840280.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253731764|ref|ZP_04865929.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733613|ref|ZP_04867778.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH130]
gi|255005936|ref|ZP_05144537.2| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257795120|ref|ZP_05644099.1| glutamate racemase [Staphylococcus aureus A9781]
gi|258407172|ref|ZP_05680321.1| glutamate racemase [Staphylococcus aureus A9763]
gi|258421737|ref|ZP_05684658.1| glutamate racemase [Staphylococcus aureus A9719]
gi|258432919|ref|ZP_05688608.1| glutamate racemase [Staphylococcus aureus A9299]
gi|258443409|ref|ZP_05691752.1| glutamate racemase [Staphylococcus aureus A8115]
gi|258446082|ref|ZP_05694244.1| glutamate racemase [Staphylococcus aureus A6300]
gi|258449805|ref|ZP_05697903.1| glutamate racemase [Staphylococcus aureus A6224]
gi|258454904|ref|ZP_05702867.1| glutamate racemase [Staphylococcus aureus A5937]
gi|262048731|ref|ZP_06021613.1| glutamate racemase [Staphylococcus aureus D30]
gi|262051669|ref|ZP_06023888.1| glutamate racemase [Staphylococcus aureus 930918-3]
gi|269202763|ref|YP_003282032.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED98]
gi|282894178|ref|ZP_06302409.1| glutamate racemase [Staphylococcus aureus A8117]
gi|282919928|ref|ZP_06327657.1| glutamate racemase [Staphylococcus aureus A9765]
gi|282928673|ref|ZP_06336270.1| glutamate racemase [Staphylococcus aureus A10102]
gi|284024075|ref|ZP_06378473.1| glutamate racemase [Staphylococcus aureus subsp. aureus 132]
gi|294848141|ref|ZP_06788888.1| glutamate racemase [Staphylococcus aureus A9754]
gi|295405955|ref|ZP_06815764.1| glutamate racemase [Staphylococcus aureus A8819]
gi|296275637|ref|ZP_06858144.1| glutamate racemase [Staphylococcus aureus subsp. aureus MR1]
gi|297208211|ref|ZP_06924641.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300912288|ref|ZP_07129731.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH70]
gi|304381292|ref|ZP_07363945.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|54037867|sp|P63638|MURI_STAAN RecName: Full=Glutamate racemase
gi|54037868|sp|P63639|MURI_STAAW RecName: Full=Glutamate racemase
gi|54041261|sp|P63637|MURI_STAAM RecName: Full=Glutamate racemase
gi|56749202|sp|Q6GA64|MURI_STAAS RecName: Full=Glutamate racemase
gi|71151976|sp|Q5HGT3|MURI_STAAC RecName: Full=Glutamate racemase
gi|122539773|sp|Q2FZC6|MURI_STAA8 RecName: Full=Glutamate racemase
gi|123486328|sp|Q2FHT1|MURI_STAA3 RecName: Full=Glutamate racemase
gi|166231056|sp|A7X179|MURI_STAA1 RecName: Full=Glutamate racemase
gi|172048828|sp|A6QG53|MURI_STAAE RecName: Full=Glutamate racemase
gi|189030372|sp|A6U0W7|MURI_STAA2 RecName: Full=Glutamate racemase
gi|189030373|sp|A5IS36|MURI_STAA9 RecName: Full=Glutamate racemase
gi|189030374|sp|A8Z1T2|MURI_STAAT RecName: Full=Glutamate racemase
gi|13700950|dbj|BAB42246.1| glutamate racemase [Staphylococcus aureus subsp. aureus N315]
gi|14246921|dbj|BAB57313.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50]
gi|21204200|dbj|BAB94898.1| glutamate racemase [Staphylococcus aureus subsp. aureus MW2]
gi|49244431|emb|CAG42859.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284446|gb|AAW36540.1| glutamate racemase [Staphylococcus aureus subsp. aureus COL]
gi|87127389|gb|ABD21903.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202410|gb|ABD30220.1| glutamate racemase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740711|gb|ABQ49009.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH9]
gi|149946149|gb|ABR52085.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH1]
gi|150374075|dbj|BAF67335.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721607|dbj|BAF78024.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu3]
gi|160368134|gb|ABX29105.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724493|gb|EES93222.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728412|gb|EES97141.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH130]
gi|257789092|gb|EEV27432.1| glutamate racemase [Staphylococcus aureus A9781]
gi|257841327|gb|EEV65772.1| glutamate racemase [Staphylococcus aureus A9763]
gi|257842070|gb|EEV66498.1| glutamate racemase [Staphylococcus aureus A9719]
gi|257849359|gb|EEV73336.1| glutamate racemase [Staphylococcus aureus A9299]
gi|257851499|gb|EEV75438.1| glutamate racemase [Staphylococcus aureus A8115]
gi|257855140|gb|EEV78081.1| glutamate racemase [Staphylococcus aureus A6300]
gi|257856725|gb|EEV79628.1| glutamate racemase [Staphylococcus aureus A6224]
gi|257862784|gb|EEV85549.1| glutamate racemase [Staphylococcus aureus A5937]
gi|259160404|gb|EEW45429.1| glutamate racemase [Staphylococcus aureus 930918-3]
gi|259163187|gb|EEW47747.1| glutamate racemase [Staphylococcus aureus D30]
gi|262075053|gb|ACY11026.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED98]
gi|269940644|emb|CBI49023.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
TW20]
gi|282589712|gb|EFB94798.1| glutamate racemase [Staphylococcus aureus A10102]
gi|282594644|gb|EFB99628.1| glutamate racemase [Staphylococcus aureus A9765]
gi|282763664|gb|EFC03793.1| glutamate racemase [Staphylococcus aureus A8117]
gi|285816830|gb|ADC37317.1| Glutamate racemase [Staphylococcus aureus 04-02981]
gi|294824941|gb|EFG41363.1| glutamate racemase [Staphylococcus aureus A9754]
gi|294969390|gb|EFG45410.1| glutamate racemase [Staphylococcus aureus A8819]
gi|296886950|gb|EFH25853.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|298694438|gb|ADI97660.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED133]
gi|300886534|gb|EFK81736.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH70]
gi|302332758|gb|ADL22951.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750973|gb|ADL65150.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340275|gb|EFM06216.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312829543|emb|CBX34385.1| glutamate racemase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128549|gb|EFT84554.1| glutamate racemase [Staphylococcus aureus subsp. aureus CGS03]
gi|315196875|gb|EFU27218.1| glutamate racemase [Staphylococcus aureus subsp. aureus CGS01]
gi|320141035|gb|EFW32882.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA131]
gi|320143092|gb|EFW34882.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA177]
gi|323440701|gb|EGA98411.1| glutamate racemase [Staphylococcus aureus O11]
gi|323442356|gb|EGA99985.1| glutamate racemase [Staphylococcus aureus O46]
gi|329313818|gb|AEB88231.1| Glutamate racemase [Staphylococcus aureus subsp. aureus T0131]
gi|329725174|gb|EGG61663.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21172]
gi|329728845|gb|EGG65266.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21193]
gi|329730728|gb|EGG67107.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21189]
Length = 266
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 9/248 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189
T++ I +H V+ VE+ ++ + I + +++
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQ----MRYSDPTITSIVIHQTLKRWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 175 SESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDH 234
Query: 249 ALFLSGKP 256
F +G P
Sbjct: 235 RFFATGDP 242
>gi|111220958|ref|YP_711752.1| glutamate racemase [Frankia alni ACN14a]
gi|111148490|emb|CAJ60161.1| Glutamate racemase [Frankia alni ACN14a]
Length = 306
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL V + + +P +Y+ D PYG +++ + ++D+
Sbjct: 6 VGVFDSGVGGLTVARAILDQLPHEPLVYLGDTGRAPYGPRPIAEVRRYALECLDRLVDEG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134
+L VIACNTA + R + +PA ++A A T+SG + ++ T AT+ R
Sbjct: 66 VKLL-VIACNTASAACLRDARERYSVPVVEVIMPATRRAVAATRSGRVGVIGTVATIGSR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++ + + L + + + V+ GI ++ E + D
Sbjct: 125 AYD----DAFTAAAGVDL-TGVACPAFVDFVERGITSGR-QLLGLTEAYLAPLQEADVDT 178
Query: 195 IVLACTHYPLIVHVF 209
++L CTHYPL+ V
Sbjct: 179 VILGCTHYPLLTGVI 193
>gi|281425969|ref|ZP_06256882.1| glutamate racemase [Prevotella oris F0302]
gi|281399862|gb|EFB30693.1| glutamate racemase [Prevotella oris F0302]
Length = 278
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFS 69
I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + ++ +M LF
Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQAVMKLF- 67
Query: 70 DILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123
+ L ++ CNTA ++ + +L + PS LG + P + T++ +
Sbjct: 68 ----ELGCHLVILGCNTASAKALRSIQRTDLPNLDPSRRVLGVIRPTAEIIGTLTKNNHV 123
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T++ I + + V+ VE + +KK I+
Sbjct: 124 GLLATEGTVKSHSYDLEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRIDEL 183
Query: 184 FIEKEGKRTDVIVLACTHYPLIV 206
+ D I+L CTHYP+++
Sbjct: 184 MLHD--PDIDTIILGCTHYPILM 204
>gi|323465948|gb|ADX69635.1| Glutamate racemase [Lactobacillus helveticus H10]
Length = 267
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 41/269 (15%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I + DSG+GG V++K+ +P +++ D PYG+ +
Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVKKVIEKLPHESTVFIGDSANMPYGDKSREQIIE 52
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117
++ + FL + L + ACNTA + L++ +G + + AAA
Sbjct: 53 LTRRSVKFLLQKKVK-----LIIFACNTATAVAMPTLQNEV-EQQIIGVIQSGSLAAART 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--- 174
T++ +++ +TP T+ H+Y + ++ E A I+ ++D
Sbjct: 107 TKNKKVAVAATPVTINS-------HAYQKEIKFRDPDIKVMEVAAPELAPLIESQKDYDT 159
Query: 175 ---EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+K+ I + + D VL CTHYPLI + F + + +D +D +A+
Sbjct: 160 NLAAVKRSIAPL----KDQDFDTFVLGCTHYPLIQNEFAEALGDKIQIVDPADQVAQYTF 215
Query: 232 CLLPRINTHQTRVFDD---HALFLSGKPD 257
++ R + FD H + +G PD
Sbjct: 216 NVMRRDGLFSS--FDQAGKHEYYTTGDPD 242
>gi|332653705|ref|ZP_08419449.1| glutamate racemase [Ruminococcaceae bacterium D16]
gi|332516791|gb|EGJ46396.1| glutamate racemase [Ruminococcaceae bacterium D16]
Length = 278
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 9/207 (4%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
V +++R +P + +Y D PYGN + ++ D + + Q ++ACNT
Sbjct: 20 VARRVRRQLPNENILYFGDGGNNPYGNHTAEEILSLTRYML-DFMRQRQVKALLVACNTI 78
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
LI DE R L V A ++AA+ + ++ST T LI +
Sbjct: 79 SCLI-DEYRREM-DCPVLSVVQAGAESAAHRPEKRVGVISTCFTASTGCYPALIAQLAPE 136
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ LA+ VE A +I E E+++ ++G + + + +LACTHYPL+
Sbjct: 137 KKVFSRGYKNLAAMVEHGASQQEIDE-ELRENLDGLVHQDQ---VECCLLACTHYPLVEE 192
Query: 208 VFRQLSPWPVDWLDNSDSIARR-ARCL 233
R+L P + +D +D +AR RCL
Sbjct: 193 NIRRLYPQ-LQLVDPADRMARELERCL 218
>gi|124023594|ref|YP_001017901.1| aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9303]
gi|123963880|gb|ABM78636.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9303]
Length = 268
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 20/223 (8%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+++ + +Y+ D PYGN H ++ + + D+ Q
Sbjct: 7 LFDSGLGGLTVLRRVLERHGQVSCLYLGDTARVPYGNRMPHEIRVIAKEVVQWLRDQ-QV 65
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA---IKQAAAYTQSGLISILSTPATLRR 134
V+ACNT L D + A G +P I+ AA + +L+T
Sbjct: 66 TAVVMACNTTNALASDV------AEAVAGGIPVVRLIEAAANMLSEARVGVLAT------ 113
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIEKEGKR 191
+ +Y Q I +M++ + I ++ +E+ + +
Sbjct: 114 -PAAAASGAYGKQIEISRPGTMVIEQGCPAFVPLIETGQLSSEELYQAAREYLNPLLAAQ 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ +VL CTHYPL+ + RQ+ P V +D + +AR LL
Sbjct: 173 VEAVVLGCTHYPLLEPILRQILPQDVRLIDPAIGVARELDVLL 215
>gi|317179086|dbj|BAJ56874.1| glutamate racemase [Helicobacter pylori F30]
Length = 255
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT+R N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H LS P V++L ++ + A
Sbjct: 170 LKILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|260579687|ref|ZP_05847548.1| glutamate racemase [Corynebacterium jeikeium ATCC 43734]
gi|258602179|gb|EEW15495.1| glutamate racemase [Corynebacterium jeikeium ATCC 43734]
Length = 288
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 36/235 (15%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E+ I +FDSG+GGL V + + +P + +Y+ D PYG+ + A + L
Sbjct: 18 EQANNAPIGVFDSGVGGLTVARAIVDQLPHENLVYIGDTANSPYGD-KPLARVRELSIGI 76
Query: 69 SDILDKYQPVLSVIACNTAFT-LIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+D L + + V+ACN+A + I+D R + P + + +PA+++AAA T++G I ++
Sbjct: 77 ADTLAERGCKMIVVACNSASSAFIRDARERYSIPVVEVI--LPAVRRAAAATRNGKIGVI 134
Query: 127 STPATLRRTYTSNL------IHSYVSQC-------HIHLVSSMILASRVEEYACGIKIKE 173
T AT+ +L + +Y C + S L E Y +K
Sbjct: 135 GTQATVSSRSYQDLFAAIPGVEAYAQACPQFVPFVERGMTSGRQLMGLAENYLAPLK--- 191
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
EG D +VL CTHYPL+ V + + V +++++ A+
Sbjct: 192 -------------AEG--VDTVVLGCTHYPLLAGVVQLVMGEDVTLINSAEETAK 231
>gi|239629726|ref|ZP_04672757.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239528412|gb|EEQ67413.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 578
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L
Sbjct: 97 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 156
Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
K+ +L VIACNT A LIK L + +G + P + A TQ+G I I++
Sbjct: 157 KKHIKML-VIACNTATAAALPLIKANL-----DIPVIGVIKPGSRAALKATQTGHIGIIA 210
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + + + I +++ S VE I + + ++ E
Sbjct: 211 TEGTVKSGAYVKALRAKAPKIRITSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHED 270
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246
D ++L CTHYP++ + + + V +D+ LL + + +
Sbjct: 271 ----IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTP 326
Query: 247 DHALFLSGKPDI 258
H + +G P +
Sbjct: 327 THEYYTTGAPSM 338
>gi|281491802|ref|YP_003353782.1| glutamate racemase [Lactococcus lactis subsp. lactis KF147]
gi|281375516|gb|ADA65026.1| Glutamate racemase [Lactococcus lactis subsp. lactis KF147]
Length = 271
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 22/236 (9%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V +++ +P +Y+ D PYG +
Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ + +L K ++ V+ACNT A ++K++L + GA AI++ T
Sbjct: 53 FTWDMVNFLLSKDVKMI-VMACNTATAMALEIVKEKLDIPVIGVILPGASSAIQK----T 107
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ I +++T A++R I S ++ ++ S VE E EI +
Sbjct: 108 KTNKIGVIATQASIRSDEYHKTIARKSSAVEVYSLACQKFVSIVESNEM-----ESEIAR 162
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++ + + D ++L CTHYPL+ + ++ V +D+ R LL
Sbjct: 163 KVVSESLVPLIGKVDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLL 218
>gi|134097799|ref|YP_001103460.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|291005565|ref|ZP_06563538.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|189030368|sp|A4F910|MURI_SACEN RecName: Full=Glutamate racemase
gi|133910422|emb|CAM00535.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338]
Length = 271
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P YV D PYG ++ R + + ++ +
Sbjct: 6 IGIFDSGVGGLTVARAIMDQLPGEALRYVGDTANAPYGPRPLADIRARTLAITDSLVAEG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134
+L VIACN+A + R + +PA+++A A T++G + ++ T AT+ R
Sbjct: 66 VKML-VIACNSASAACLRDARERYDVPVVEVVLPAVRRAVATTRNGRVGVIGTQATITSR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++ + + L S R ++ ++ + + D
Sbjct: 125 AYD----DAFTAAPGVTL--STAACPRFADFVERGITSGRQVLGLAQAYLDPLQQADVDT 178
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHYPL+ V +
Sbjct: 179 LVLGCTHYPLLTGVLQ 194
>gi|68535566|ref|YP_250271.1| glutamate racemase [Corynebacterium jeikeium K411]
gi|68263165|emb|CAI36653.1| murI [Corynebacterium jeikeium K411]
Length = 288
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P + +Y+ D PYG+ + A + L +D L +
Sbjct: 25 IGVFDSGVGGLTVARAIVDQLPHENLVYIGDTANSPYGD-KPLAQVRELSIRIADTLAER 83
Query: 76 QPVLSVIACNTAFT-LIKDEL-RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACN+A + I+D R + P + + +PA+++AAA T++G I ++ T AT+
Sbjct: 84 GCKMIVVACNSASSAFIRDARERYSIPVVEVI--LPAVRRAAAATRNGRIGVIGTQATVN 141
Query: 134 RTYTSNL------IHSYVSQC-------HIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+L + +Y C + S L E Y +K
Sbjct: 142 SMSYQDLFAAIPGVEAYAQACPQFVPFVERGMTSGRQLMGLAENYLAPLK---------- 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ D +VL CTHYPL+ V + + V +++++ A+
Sbjct: 192 --------AQGVDTVVLGCTHYPLLTGVVQLVMGEDVTLINSAEETAK 231
>gi|297162715|gb|ADI12427.1| putative glutamate racemase [Streptomyces bingchenggensis BCW-1]
Length = 274
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 79/196 (40%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L + L P+ + +D P+G + +R + +
Sbjct: 3 IALMDSGIGLLPAAAAVHRLRPDADLVLSSDPGSMPWGPRTPEDVTQRALACVR-AAAAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ P + +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIVACNTASVHALSALRAELEPGLPVIGTVPAIKPAAA--GGGPVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V+ LA V+ + +
Sbjct: 120 PYQRRLISDFADGVTVTEVACPGLAEAVQRADSAAIDAAVADAA-------ARTPRDIRA 172
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 173 LVLGCTHYELVADRIR 188
>gi|83589382|ref|YP_429391.1| glutamate racemase [Moorella thermoacetica ATCC 39073]
gi|83572296|gb|ABC18848.1| glutamate racemase [Moorella thermoacetica ATCC 39073]
Length = 276
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 14/248 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL V +++ +P IY D PYG+ L + ++
Sbjct: 5 QPVGVFDSGVGGLTVAREITRQLPAETIIYFGDTAHVPYGSRPVDELIHFADTIVGFLIA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ + V ACNT + L+ + S+ +G + P ++ A T++G I +++T AT+
Sbjct: 65 RGAKAI-VDACNTTSAVALPYLQQKY-SIPIIGVIEPGVEAALQATKNGRIGVIATEATI 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ S + + + VE GI + ++ + C
Sbjct: 123 ASDAHRRALLSRGKEVQVFTRACPPFVPLVE---AGI-VAGPRVEGVVAECLESLLQAGI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFDDH 248
D ++L CTHYP + V + L+ V +D + + R + +L H +R H
Sbjct: 179 DTLILGCTHYPFLAPVIQDLAGPGVTLVDPAAATVRELKSVLAAGGGLRGPHGSRA---H 235
Query: 249 ALFLSGKP 256
++SG P
Sbjct: 236 EFYVSGDP 243
>gi|89256134|ref|YP_513496.1| glutamate racemase [Francisella tularensis subsp. holarctica LVS]
gi|115314607|ref|YP_763330.1| glutamate racemase [Francisella tularensis subsp. holarctica OSU18]
gi|156502156|ref|YP_001428221.1| glutamate racemase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|167009837|ref|ZP_02274768.1| glutamate racemase [Francisella tularensis subsp. holarctica
FSC200]
gi|290953270|ref|ZP_06557891.1| glutamate racemase [Francisella tularensis subsp. holarctica URFT1]
gi|295313512|ref|ZP_06804107.1| glutamate racemase [Francisella tularensis subsp. holarctica URFT1]
gi|89143965|emb|CAJ79186.1| glutamate racemase [Francisella tularensis subsp. holarctica LVS]
gi|115129506|gb|ABI82693.1| glutamate racemase [Francisella tularensis subsp. holarctica OSU18]
gi|156252759|gb|ABU61265.1| glutamate racemase [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 265
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL +++ + ++P IY D PYG ++K
Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQK 53
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ ++D+ + +IACNT + KD ++ ++ + + A +
Sbjct: 54 FAVQTAKFLIDQEVKAI-IIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++TPAT+ + IH ++ + S +EE I E + KE
Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVE-LVAKEYLS 169
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
F K ++L CTHYP+I
Sbjct: 170 YF---HDKNIQTLILGCTHYPII 189
>gi|257869444|ref|ZP_05649097.1| glutamate racemase [Enterococcus gallinarum EG2]
gi|257803608|gb|EEV32430.1| glutamate racemase [Enterococcus gallinarum EG2]
Length = 270
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 16/243 (6%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++ +P H IY+ D PYG + + + ++ L +
Sbjct: 10 IDSGVGGLTVVKEAIKQLPNEHIIYLGDTARCPYGPRPAEQVIE-YTWQMTEFLLQQNIK 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA + +E++ S+ +G + P + A T++ I ++ T T++
Sbjct: 69 MLVIACNTATAVALEEIKEKL-SIPVIGVILPGSRAAVKATKNQQIGVIGTAGTIKS--- 124
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE---IKKEIEGCFIEKEGKRTDV 194
++Y + S++++ ++A ++ + + KK + + K+ D
Sbjct: 125 ----NAYEEAIKLKSPRSVVVSLACPKFAPIVESNQAQSSVAKKIVAETLRPLKNKKLDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALF 251
++L CTHYPL+ + + + +D+ LL NT Q ++ +
Sbjct: 181 LILGCTHYPLLRSLIQNEMGSQIQLIDSGAETVGEVSMLLDYFAIANTSQMTQEPEYFFY 240
Query: 252 LSG 254
+G
Sbjct: 241 TTG 243
>gi|24113787|ref|NP_708297.1| glutamate racemase [Shigella flexneri 2a str. 301]
gi|24052869|gb|AAN44004.1| similar to glutamate racemase [Shigella flexneri 2a str. 301]
gi|281601863|gb|ADA74847.1| glutamate racemase [Shigella flexneri 2002017]
gi|332766260|gb|EGJ96470.1| glutamate racemase [Shigella flexneri 2930-71]
Length = 273
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
++ I + DSG+GGL ++++ L+P IY D++ PYGN + KK L FL
Sbjct: 9 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFLQ 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124
S + L +ACNT + ++ E S +FP L + + Q +
Sbjct: 69 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 122
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
I++T T++ LI S ++ S LA +EE ++IKK +
Sbjct: 123 IIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 182
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ I+L CTHYP++ + F ++P
Sbjct: 183 ---SLHPVNEIILGCTHYPIVQNFFEAVAP 209
>gi|197693646|gb|ACH71492.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG +D A K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPATIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|29827966|ref|NP_822600.1| glutamate racemase [Streptomyces avermitilis MA-4680]
gi|29605067|dbj|BAC69135.1| putative glutamate racemase [Streptomyces avermitilis MA-4680]
Length = 261
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 80/196 (40%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + +R + + +
Sbjct: 3 IALLDSGIGLLAAAAAVRRLRPDADLVLSSDPASVPWGPRTPQDVTERSLAVAE-AAAAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P + ACNT LR+ F P + +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIAACNTMSVHALPALRARFEPGLPVIGTVPAIKPAAA--SGGPVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE E+ V
Sbjct: 120 PYQRGLIREFADGVAVTEVPCPGLADAVEHANEAAIDAAIAAAA-------ERTPDDVRV 172
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 173 VVLGCTHYELVAERIR 188
>gi|239983757|ref|ZP_04706281.1| glutamate racemase [Streptomyces albus J1074]
gi|291455563|ref|ZP_06594953.1| glutamate racemase [Streptomyces albus J1074]
gi|291358512|gb|EFE85414.1| glutamate racemase [Streptomyces albus J1074]
Length = 261
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 78/196 (39%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G L + + +
Sbjct: 3 IALVDSGIGLLPAAAAVRRLRPDADLVLSSDPDSMPWGPRTPEDLSAHALAVAEAAAEHA 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA LR F P + +G VPAIK AAA G ++I +TPAT
Sbjct: 63 PDAL-VVACNTASVHALPALRERFEPGLPVIGTVPAIKPAAA--AGGHVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V+ LA V+ + +
Sbjct: 120 PYQRRLIAEFSGSTPVTEVACPGLADAVQ-------WDDPTAVAAAIADAAARTPSTVTS 172
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 173 VVLGCTHYELVGDAIR 188
>gi|294786553|ref|ZP_06751807.1| glutamate racemase [Parascardovia denticolens F0305]
gi|294485386|gb|EFG33020.1| glutamate racemase [Parascardovia denticolens F0305]
Length = 273
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 105/264 (39%), Gaps = 26/264 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V++++R MP+ I+ D PYG + + L F +D L K
Sbjct: 17 IGVFDSGMGGISVVRQLRRDMPDQDIIFFGDSANAPYGTRPINEVTD-LSFAVADRLVKQ 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST------- 128
VIACNTA + LR + + +G PA+K A Q +L T
Sbjct: 76 GVKAIVIACNTATSACAPLLRRHY-DIPIIGMEPALKVAIDRGQGKSQHVLVTATKLTLE 134
Query: 129 ----PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
A + R +N+I + + LV + L R + + IE
Sbjct: 135 GRKFAALMDRERGNNIIETQPCPDLVTLVEADDLGDR------------ELVLSTIERYL 182
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D IVL CTH+ FR++ P +D + +R + +L R
Sbjct: 183 RPFDLDSLDSIVLGCTHFVFYRRYFREILPDYAAIIDGNQGTSRHVQEVLGYQGKSAERA 242
Query: 245 FDDHALFL-SGKPDIAMRRLMQGF 267
+ L + K D LMQ
Sbjct: 243 AGKGTVILQNSKTDPQTAALMQAL 266
>gi|254369138|ref|ZP_04985150.1| hypothetical protein FTAG_00072 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122088|gb|EDO66228.1| hypothetical protein FTAG_00072 [Francisella tularensis subsp.
holarctica FSC022]
Length = 265
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL +++ + ++P IY D PYG ++K
Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQK 53
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ ++D+ + +IACNT + KD ++ ++ + + A +
Sbjct: 54 FAVQTAKFLIDQEVKAI-IIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++TPAT+ + IH ++ + S +EE I E + KE
Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVE-LVAKEYLS 169
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
F K ++L CTHYP+I
Sbjct: 170 YF---HDKNIQALILGCTHYPII 189
>gi|333001587|gb|EGK21155.1| glutamate racemase [Shigella flexneri VA-6]
Length = 269
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
++ I + DSG+GGL ++++ L+P IY D++ PYGN + KK L FL
Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFLQ 64
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124
S + L +ACNT + ++ E S +FP L + + Q +
Sbjct: 65 SRNVK-----LVAVACNTISSTLESEKYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 118
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
I++T T++ LI S ++ S LA +EE ++IKK +
Sbjct: 119 IIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ I+L CTHYP++ + F ++P
Sbjct: 179 ---SLHPVNEIILGCTHYPIVQNFFEAVAP 205
>gi|226305260|ref|YP_002765218.1| glutamate racemase [Rhodococcus erythropolis PR4]
gi|226184375|dbj|BAH32479.1| glutamate racemase [Rhodococcus erythropolis PR4]
Length = 254
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G + + R++ LD+
Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLVLSLDPDGAPWGPKPEPWVVDRVLGAVRRSLDRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ V+ CNTA +R P + +G VPAIK AAA S ++I +T AT
Sbjct: 63 AQVI-VLPCNTASVTALPHVRELVGPEVPVIGTVPAIKPAAAACDS--VAIWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-- 192
Y ++LI + + + V LA + D + I+ RT
Sbjct: 120 RYQADLIEQFGNGAKVVGVPCHGLADSI-----------DLGDRAAALAAIDSAVARTPD 168
Query: 193 DV--IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
DV +VL CTHYPL+ P V D+++++AR+
Sbjct: 169 DVSGVVLGCTHYPLLADEIAARLPAGVTLFDSAEAVARQ 207
>gi|218131992|ref|ZP_03460796.1| hypothetical protein BACEGG_03615 [Bacteroides eggerthii DSM 20697]
gi|217985868|gb|EEC52208.1| hypothetical protein BACEGG_03615 [Bacteroides eggerthii DSM 20697]
Length = 279
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 39/259 (15%)
Query: 9 EKKLQNS---ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
++KL +S I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + +
Sbjct: 2 KQKLPSSPGPIGVFDSGYGGLTILSKIREILPEYDYIYLGDNARAPYGT---RSFEVVYA 58
Query: 66 FLFSDILDKYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117
F + ++ L ++ACNTA ++ ++L + LG + P ++
Sbjct: 59 FTLQAVTRLFEMGCHLVILACNTASAKALRSIQINDLPHLDSARRVLGVIRPTVECIGNI 118
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKED 174
T+S + +L+T T++ S+ + + + +V AC + ++ +
Sbjct: 119 TRSRHVGVLATSGTIK------------SESYPLEIRKLFPDIKVSGEACPLWVSLVENN 166
Query: 175 EIKKEIEGCFIEK-------EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
E + FI K + + D +L CTHYP+++ +Q P + + +A
Sbjct: 167 EALGDGTDYFIRKYINELLAKDREIDTAILGCTHYPILLPKIQQYMPAGITIVSQGQLVA 226
Query: 228 RRARCLL---PRINTHQTR 243
+ L P I+ TR
Sbjct: 227 DSLKDYLHRHPEIDIKCTR 245
>gi|169335598|ref|ZP_02862791.1| hypothetical protein ANASTE_02013 [Anaerofustis stercorihominis DSM
17244]
gi|169258336|gb|EDS72302.1| hypothetical protein ANASTE_02013 [Anaerofustis stercorihominis DSM
17244]
Length = 269
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I I DSG+GGL V ++ L+P + IY+ D PYGN + + K + +L
Sbjct: 7 IGILDSGVGGLTVFKQTERLLPNENIIYLGDTKRMPYGNKSEEEIIILANKMISYL---- 62
Query: 72 LDKYQPVLSV-IACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Q V +V +ACNT + I ++L S P S+ G+ A K+++ T LI +++T
Sbjct: 63 --EEQDVKAVLLACNTISSHI-EKLTSKVPIFSIVKAGSELATKKSSE-TNVDLIGLIAT 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + IH +I S L ++ + IK+ IE I+KE
Sbjct: 119 KATVNSGSYNKEIHKLNKDINIISNDSTRLPKVIDSQIENKPLLNQLIKECIEP-IIDKE 177
Query: 189 GKRTDVIVLACTHYPLI 205
K ++L C+H+P+I
Sbjct: 178 -KNVKNLILGCSHFPII 193
>gi|313650908|gb|EFS15308.1| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|332755494|gb|EGJ85858.1| glutamate racemase [Shigella flexneri K-671]
gi|333001965|gb|EGK21531.1| glutamate racemase [Shigella flexneri K-218]
Length = 269
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
++ I + DSG+GGL ++++ L+P IY D++ PYGN + KK L FL
Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFLQ 64
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124
S + L +ACNT + ++ E S +FP L + + Q +
Sbjct: 65 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 118
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
I++T T++ LI S ++ S LA +EE ++IKK +
Sbjct: 119 IIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ I+L CTHYP++ + F ++P
Sbjct: 179 ---SLHPVNEIILGCTHYPIVQNFFEAVAP 205
>gi|254374574|ref|ZP_04990055.1| glutamate racemase [Francisella novicida GA99-3548]
gi|151572293|gb|EDN37947.1| glutamate racemase [Francisella novicida GA99-3548]
Length = 265
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL +++ + ++P IY D PYG + A +
Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGT-KSRATIQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + L + + +IACNT + KD ++ ++ + + A +
Sbjct: 53 KFAAQTAKFLIEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++TPAT+ + IH ++ + S +EE +I E + KE
Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVE-LVAKEYLS 169
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
F K +VL CTHYP+I
Sbjct: 170 YF---HDKNIQALVLGCTHYPII 189
>gi|315226136|ref|ZP_07867924.1| glutamate racemase [Parascardovia denticolens DSM 10105]
gi|315120268|gb|EFT83400.1| glutamate racemase [Parascardovia denticolens DSM 10105]
Length = 282
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 105/264 (39%), Gaps = 26/264 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V++++R MP+ I+ D PYG + + L F +D L K
Sbjct: 26 IGVFDSGMGGISVVRQLRRDMPDQDIIFFGDSANAPYGTRPINEVTD-LSFAVADRLVKQ 84
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST------- 128
VIACNTA + LR + + +G PA+K A Q +L T
Sbjct: 85 GVKAIVIACNTATSACAPLLRRHY-DIPIIGMEPALKVAIDRGQGKSQHVLVTATKLTLE 143
Query: 129 ----PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
A + R +N+I + + LV + L R + + IE
Sbjct: 144 GRKFAALMDRERGNNIIETQPCPDLVTLVEADDLGDR------------ELVLSTIERYL 191
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D IVL CTH+ FR++ P +D + +R + +L R
Sbjct: 192 RPFDLDSLDSIVLGCTHFVFYRRYFREILPDYAAIIDGNQGTSRHVQEVLGYQGKSAERA 251
Query: 245 FDDHALFL-SGKPDIAMRRLMQGF 267
+ L + K D LMQ
Sbjct: 252 AGKGTVILQNSKTDPQTAALMQAL 275
>gi|298373442|ref|ZP_06983431.1| glutamate racemase [Bacteroidetes oral taxon 274 str. F0058]
gi|298274494|gb|EFI16046.1| glutamate racemase [Bacteroidetes oral taxon 274 str. F0058]
Length = 282
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 9/205 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+ + +P+Y ++Y+ D+ PYG + + + D
Sbjct: 14 IGVFDSGYGGLTVLKDIIEQLPQYDYVYLGDNARTPYGTRSYEVVYGYTLQCVRRLFDMD 73
Query: 76 QPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
++ ++ACNTA ++ +++L P LG + P + + T++ + IL T
Sbjct: 74 CRIV-ILACNTASAKALRSIQQNDLPLIAPDRRVLGVIRPTAESIGSLTKTNTVGILGTT 132
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+R I + + + +E + IKK I+ I +
Sbjct: 133 GTIRSQSYEIEIKKLFPRIEVVSQECPMWVPLIENNEHLTAGADYFIKKYIDS--ILAKN 190
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSP 214
D +VL CTHYPLI + P
Sbjct: 191 NNIDTLVLGCTHYPLIADSIARFVP 215
>gi|46091551|dbj|BAD13991.1| HP0549 [Helicobacter pylori]
Length = 255
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 32/248 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + +Y D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIVYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234
+V++L CTH+PLI H LS P V++L ++ + A C
Sbjct: 173 LPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYTLKKNA-CAF 231
Query: 235 PRINTHQT 242
P++ H +
Sbjct: 232 PKVEFHAS 239
>gi|324324893|gb|ADY20153.1| glutamate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 276
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLMKENI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + +H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|158317397|ref|YP_001509905.1| glutamate racemase [Frankia sp. EAN1pec]
gi|229486274|sp|A8L764|MURI_FRASN RecName: Full=Glutamate racemase
gi|158112802|gb|ABW14999.1| glutamate racemase [Frankia sp. EAN1pec]
Length = 276
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 22/229 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P +Y+ D PYG +++ + +++
Sbjct: 6 IGVFDSGVGGLTVARAILDQLPGESLLYIGDTAHAPYGPRPIAEVRRYALAALDELVSAG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134
+L VIACN+A + R + VPA ++A A T+SG + ++ T AT+ R
Sbjct: 66 VKLL-VIACNSASAACLRDARERYDVPVVEVIVPATRRAVAATRSGRVGVIGTVATITSR 124
Query: 135 TY-------TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
Y + S + V I + R ++ E
Sbjct: 125 AYEDAFAAAAGTELVSVACPAFVDFVERGITSGR-------------QLLGLTEAYLAPL 171
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D ++L CTHYPL+ V + V + +++ A+ +L R
Sbjct: 172 QEADVDTVILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLAR 220
>gi|311113410|ref|YP_003984632.1| glutamate racemase [Rothia dentocariosa ATCC 17931]
gi|310944904|gb|ADP41198.1| glutamate racemase [Rothia dentocariosa ATCC 17931]
Length = 346
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 11/233 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 23 PAGPTSSAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 82
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGL 122
+ +++D +L VIACNTA + + R + + + PA ++A A T++
Sbjct: 83 IMDELVDSGVKML-VIACNTASAAVLRDARERYTRHYGIPVIEVIQPAARRALAATRNRK 141
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++T AT+ TS + +V S+ VE G+ E+ + E
Sbjct: 142 IGVIATEATV----TSRAYEDTFAIAPNLMVQSVACPRFVEFVEKGV-TSGPELLRTAEE 196
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLL 234
+ R D +VL CTHYPL+ + + V + ++D A+ R LL
Sbjct: 197 YLQPLKDSRVDTLVLGCTHYPLLTGIISYIMGEGVTLVSSADETAKDVYRALL 249
>gi|224372568|ref|YP_002606940.1| glutamate racemase [Nautilia profundicola AmH]
gi|223588690|gb|ACM92426.1| glutamate racemase [Nautilia profundicola AmH]
Length = 245
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSGIGGL V ++ IY D PYGN + + R + L +
Sbjct: 6 VFDSGIGGLSVASELLKSKLFDEIIYFGDTARVPYGNKNESTII-RYSLEALEFLKNFDI 64
Query: 78 VLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACN+A ++ DELR + FP +G + A +A ++ I + T T++
Sbjct: 65 DFLVVACNSASSVAIDELRREAGFP---VVGVIEAGVKALDAAKTSNILLTGTKRTIQSN 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIEKEGKRTDV 194
N++ Q +I V++ + VEE I E +I E+ E F + + D
Sbjct: 122 KYQNMLLDLGYQ-NIISVATPLFVPLVEE-----GITEGKIVDEVFELYFGDIDKSSIDY 175
Query: 195 IVLACTHYPLIVHVFRQLSP 214
++L CTHYP + F++ P
Sbjct: 176 VILGCTHYPFLAKSFKKHFP 195
>gi|307776633|pdb|3OUT|A Chain A, Crystal Structure Of Glutamate Racemase From Francisella
Tularensis Subsp. Tularensis Schu S4 In Complex With
D-Glutamate.
gi|307776634|pdb|3OUT|B Chain B, Crystal Structure Of Glutamate Racemase From Francisella
Tularensis Subsp. Tularensis Schu S4 In Complex With
D-Glutamate.
gi|307776635|pdb|3OUT|C Chain C, Crystal Structure Of Glutamate Racemase From Francisella
Tularensis Subsp. Tularensis Schu S4 In Complex With
D-Glutamate
Length = 268
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL +++ + ++P IY D PYG ++K
Sbjct: 5 LDNRP--------IGVFDSGIGGLTIVKNLXSILPNEDIIYFGDIARIPYGTKSRATIQK 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
++D+ + +IACNT + KD ++ ++ + + A +
Sbjct: 57 FAAQTAKFLIDQEVKAI-IIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 113
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++TPAT+ + IH ++ + S +EE I E + KE
Sbjct: 114 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSXIEEGFVSGHIVE-LVAKEYLS 172
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
F K ++L CTHYP+I
Sbjct: 173 YF---HDKNIQALILGCTHYPII 192
>gi|297246515|ref|ZP_06930353.1| glutamate racemase [Staphylococcus aureus A8796]
gi|297176621|gb|EFH35884.1| glutamate racemase [Staphylococcus aureus A8796]
Length = 266
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 17/252 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQFTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ I I + K
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYS--------DPTITSIVIHQTLK 170
Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV- 244
R +D ++L CTHYPL+ + + AR LL N H +
Sbjct: 171 RWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTE 230
Query: 245 FDDHALFLSGKP 256
DH F +G P
Sbjct: 231 HPDHRFFATGDP 242
>gi|210614803|ref|ZP_03290332.1| hypothetical protein CLONEX_02546 [Clostridium nexile DSM 1787]
gi|210150572|gb|EEA81581.1| hypothetical protein CLONEX_02546 [Clostridium nexile DSM 1787]
Length = 275
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHA 59
M IDN K + +FDSG+GGL V +++ +P + +Y D PYG+ D+
Sbjct: 1 MSIDN-----KNAAPVGVFDSGVGGLTVAREIMRQLPNENLVYFGDTARVPYGSKSRDNI 55
Query: 60 LK-KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117
++ R + F L VIACNTA L D +R + +G V P + A
Sbjct: 56 IRYSRQIIHF---LKTKGVKAIVIACNTASALALDVVREE-SDIPIIGVVEPGARAALQI 111
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
TQ+ I ++ T AT++ +I + + + VEE K+ E+ I
Sbjct: 112 TQTKKIGVIGTEATVQSAMYGKIIKGLDPTVSVIGKACPLFVPLVEEGFAKHKVTEEIID 171
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLI 205
+ KE D ++L CTHYPL+
Sbjct: 172 YYLASM---KESD-IDSLILGCTHYPLL 195
>gi|161506994|ref|YP_001576948.1| glutamate racemase [Lactobacillus helveticus DPC 4571]
gi|260102884|ref|ZP_05753121.1| glutamate racemase [Lactobacillus helveticus DSM 20075]
gi|172048195|sp|A8YTR6|MURI_LACH4 RecName: Full=Glutamate racemase
gi|160347983|gb|ABX26657.1| Glutamate racemase [Lactobacillus helveticus DPC 4571]
gi|260083308|gb|EEW67428.1| glutamate racemase [Lactobacillus helveticus DSM 20075]
Length = 267
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 41/269 (15%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I + DSG+GG V++K+ +P +++ D PYG+ +
Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVKKVIEKLPHESTVFIGDSANMPYGDKSREQIIE 52
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117
++ + FL + L + ACNTA + L++ +G + + AAA
Sbjct: 53 LTRRSVKFLLQKKVK-----LIIFACNTATAVAMPTLQNEV-EQQIIGVIQSGSLAAART 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--- 174
T++ +++ +TP T+ H+Y + ++ E A I+ ++D
Sbjct: 107 TKNKKVAVAATPVTINS-------HAYQKEIKFRDPDIKVMEVAAPELAPLIESQKDYDT 159
Query: 175 ---EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+K+ I + + D VL CTHYPLI + F + + +D +D +A+
Sbjct: 160 NLAAVKRSIAPL----KDQDFDTFVLGCTHYPLIQNEFVEALGDKIQIVDPADQVAQYTF 215
Query: 232 CLLPRINTHQTRVFDD---HALFLSGKPD 257
++ R + FD H + +G PD
Sbjct: 216 NVMRRDGLFSS--FDQAGKHEYYTTGDPD 242
>gi|160944622|ref|ZP_02091849.1| hypothetical protein FAEPRAM212_02135 [Faecalibacterium prausnitzii
M21/2]
gi|158443806|gb|EDP20810.1| hypothetical protein FAEPRAM212_02135 [Faecalibacterium prausnitzii
M21/2]
gi|295104374|emb|CBL01918.1| glutamate racemase [Faecalibacterium prausnitzii SL3/3]
Length = 274
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 27/265 (10%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I +FDSG+GGL ++++R +P IY D PYG+ +
Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPHEDIIYFGDTGRVPYGSRSPETILQ 52
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY- 117
++ + FL S + + AC T + + P + +LG V A + AA+
Sbjct: 53 YARQDVAFLLSKNVK-----CIMAACGTVSSTYPAAEAAQLP-VPYLGVVDAAAREAAFV 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH-----LVSSMILASRVEEYACGIKIK 172
T++ I ++ T AT+R L+ V I L ++ A V+ G K
Sbjct: 107 TRNRRIGVIGTAATIRSRSYEKLLRQLVPGVEITARACPLFVPLVEAGYVDHSEAG---K 163
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+ K I E D ++L CTHYPL+ + + V +D + + A
Sbjct: 164 QQITKLVIAQYLTEVREAGVDTLILGCTHYPLLKSMIGEFMGPGVTLVDPAMTAAHHLER 223
Query: 233 LLPRINTHQTRVFDDHALFLSGKPD 257
+L + ++S PD
Sbjct: 224 MLAERGLRASHESGQAHFYVSDVPD 248
>gi|332184267|gb|AEE26521.1| Glutamate racemase [Francisella cf. novicida 3523]
Length = 265
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL +++ + ++P IY D PYG + A+ +
Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLINILPNEDIIYFGDIARIPYGT-KSRAMIQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSG 121
+ + L + + +IACNT + KD ++ ++ + + A + + ++ G
Sbjct: 53 KFAAQTAKFLIEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDSLSKVG 112
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+I +TPAT+ + IH ++ + S +EE +I E + KE
Sbjct: 113 VI---ATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVE-LVAKEYL 168
Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205
F K ++L CTHYP+I
Sbjct: 169 SYF---HDKNIQALILGCTHYPII 189
>gi|160934063|ref|ZP_02081450.1| hypothetical protein CLOLEP_02926 [Clostridium leptum DSM 753]
gi|156866736|gb|EDO60108.1| hypothetical protein CLOLEP_02926 [Clostridium leptum DSM 753]
Length = 271
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 29/246 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG+GGL ++++R L+P +Y D PYGN + ++ + FL S
Sbjct: 7 IGVFDSGVGGLTAVKELRALLPHEDIVYFGDTSRAPYGNRSRDTILRYARQDVNFLLS-- 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
Q V +IA + + + + P + F G V P + A T++ I +++T A
Sbjct: 65 ----QKVKMIIAACGTVSSVAASMGQSLP-VPFTGVVTPTCRAAVKATKNKRIGVIATAA 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEKE 188
T+ +++ + + + VE G ++ ++ + G
Sbjct: 120 TIDSGSYRKELNALHPEIQVFEQPCPLFVPLVENAFIDPGDQVTNLVAQRYLSGL----R 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G D ++L CTHYP+I + + V +D+ A + R+ D
Sbjct: 176 GAGVDTLILGCTHYPIISAIISKAMGDQVTLIDSGRETA-----------VYAARLLKDQ 224
Query: 249 ALFLSG 254
L SG
Sbjct: 225 QLLASG 230
>gi|46091437|dbj|BAD13881.1| HP0549 [Helicobacter pylori]
Length = 286
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALGEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT+R N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYLMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|332678480|gb|AEE87609.1| Glutamate racemase [Francisella cf. novicida Fx1]
Length = 265
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL +++ + ++P IY D PYG + A +
Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGT-KSRATIQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + L + + +IACNT + KD ++ ++ + + A +
Sbjct: 53 KFAAQTAKFLIEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++TPAT+ + IH ++ + S +EE +I E + KE
Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGEIVE-LVAKEYLS 169
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
F K +VL CTHYP+I
Sbjct: 170 YF---HDKNIQALVLGCTHYPII 189
>gi|295395118|ref|ZP_06805327.1| glutamate racemase [Brevibacterium mcbrellneri ATCC 49030]
gi|294972066|gb|EFG47932.1| glutamate racemase [Brevibacterium mcbrellneri ATCC 49030]
Length = 310
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 11/216 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ + DSG+G + + +P + D PYG +++R + ++D
Sbjct: 26 TVGLLDSGLGLVPFAVAVHHELPHANLALAMDPDFAPYGALTSAQIEQRALASARTLVDA 85
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA +R F P + +G VPA+K AAA ++ +T AT
Sbjct: 86 GARAL-VIACNTASVHALSAVRERFEPLVPVIGTVPAVKPAAA--TGAPFAVWATTATTG 142
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y +LI Y +++ V+ LA ++ + E + +
Sbjct: 143 SAYQRSLISMYAGDINVYPVACAGLAQAIDS-------ADPETIDIALSAAVTATPREAQ 195
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
IVL CTHY L+ PV D+ ++AR+
Sbjct: 196 SIVLGCTHYGLVADRIEAAFDRPVTLFDSPQAVARQ 231
>gi|224532535|ref|ZP_03673159.1| glutamate racemase [Borrelia burgdorferi WI91-23]
gi|224512525|gb|EEF82902.1| glutamate racemase [Borrelia burgdorferi WI91-23]
Length = 305
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y + + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMENFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKK 178
+++T TL + + Q +IH + +I+ + E EY G K+D ++
Sbjct: 156 LLIATNTTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC 204
Query: 179 EIEGCFIEKEGKRTDVIVLACTHY 202
+E E +++ L CTHY
Sbjct: 205 -LEALKFEVVNTGREIVFLGCTHY 227
>gi|197693580|gb|ACH71459.1| glutamate racemase [Helicobacter pylori]
gi|197693696|gb|ACH71517.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LEILPEVVILGCTHFPLIAH 189
>gi|195941838|ref|ZP_03087220.1| glutamate racemase (murI) [Borrelia burgdorferi 80a]
Length = 261
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 2 KNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLIE 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 62 KLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIATN 117
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184
TL + + Q +IH + +I+ + E EY G K+D ++ +E
Sbjct: 118 TTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDALRC-LEALK 165
Query: 185 IEKEGKRTDVIVLACTHY 202
E +++ L CTHY
Sbjct: 166 FEVVNTGREIVFLGCTHY 183
>gi|229074552|ref|ZP_04207581.1| Glutamate racemase [Bacillus cereus Rock4-18]
gi|228708672|gb|EEL60816.1| Glutamate racemase [Bacillus cereus Rock4-18]
Length = 275
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 15/244 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS--DILD 73
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++K+ F+F + L
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYG---PRSVKEVQSFVFEMVEFLK 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T+
Sbjct: 67 QFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGK 190
+ +H + +H + LA+ VE ED + ++++ + +
Sbjct: 126 QSNMYEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLTKE 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTHYPL+ ++ V + +++ A +L + H
Sbjct: 180 DIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRF 239
Query: 251 FLSG 254
F +G
Sbjct: 240 FTTG 243
>gi|206975573|ref|ZP_03236485.1| glutamate racemase [Bacillus cereus H3081.97]
gi|222094594|ref|YP_002528654.1| glutamate racemase [Bacillus cereus Q1]
gi|206746035|gb|EDZ57430.1| glutamate racemase [Bacillus cereus H3081.97]
gi|221238652|gb|ACM11362.1| glutamate racemase [Bacillus cereus Q1]
Length = 276
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + +H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|24215750|ref|NP_713231.1| glutamate racemase [Leptospira interrogans serovar Lai str. 56601]
gi|59798407|sp|Q8F1S7|MURI_LEPIN RecName: Full=Glutamate racemase
gi|24196929|gb|AAN50249.1| glutamate racemase [Leptospira interrogans serovar Lai str. 56601]
Length = 256
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 9/223 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL VL+++ E +Y D PYG +D + L+ + L K
Sbjct: 7 IGLMDSGMGGLSVLKELLKYDSELEIVYYGDLKNSPYGE-KDASEVLELVRSVCNFLQKE 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ACNTA + LR F S+ G PAIK A +++L+TP T R
Sbjct: 66 NVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKVALLATPVTQREE 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L ++ + +S LA V++ D+ +K + + + + +
Sbjct: 125 KLQRLKSELKAEELVLSISCPGLAGLVDQGDF------DKAEKYLRPILANLQEQDVENL 178
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-LPRI 237
VL CTHY + + + P + NS +I L +PR+
Sbjct: 179 VLGCTHYVFLKQIILKNFPNVKIYDGNSGTIKHLLNSLQVPRV 221
>gi|10955413|ref|NP_053125.1| hypothetical protein pB171_063 [Escherichia coli]
gi|6009439|dbj|BAA84898.1| orf63 [Escherichia coli]
Length = 273
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
++ I + DSG+GGL ++++ L+P IY D+ PYGN + KK L FL
Sbjct: 9 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFLQ 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124
S + L +ACNT + ++ E S +FP L + + Q +
Sbjct: 69 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 122
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
I++T T++ LI +I S LA +EE ++IKK +
Sbjct: 123 IIATEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 182
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ I+L CTHYP++ ++F ++P
Sbjct: 183 ---SLHPVNEIILGCTHYPIVQNLFEAVAP 209
>gi|197693692|gb|ACH71515.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIGLLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LEILPEVVILGCTHFPLIAH 189
>gi|227548659|ref|ZP_03978708.1| glutamate racemase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079273|gb|EEI17236.1| glutamate racemase [Corynebacterium lipophiloflavum DSM 44291]
Length = 258
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 6/193 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + M + IY+ D PYG ++ R + +++++
Sbjct: 1 MFDSGLGGLTVARAMMDQLHNESLIYIGDSANGPYGPQPIADVRIRAQNIADELVERGVK 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+L VIACNTA + R + PA+++A A T++ + ++ T T+
Sbjct: 61 ML-VIACNTASAAFLHDARERYDVPVIEVIRPAVRRAIATTRNNRVGVIGTIGTINSGAY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+L + Q I V++ + VE G+ +I +G + D +VL
Sbjct: 120 QDL---FSLQPGIE-VTAAACPAFVEFVERGVTSGR-QILGVAQGYLEPLQAAGVDTLVL 174
Query: 198 ACTHYPLIVHVFR 210
CTHYPL+ V +
Sbjct: 175 GCTHYPLLSGVIQ 187
>gi|45656923|ref|YP_001009.1| glutamate racemase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|59798336|sp|Q72TI2|MURI_LEPIC RecName: Full=Glutamate racemase
gi|45600160|gb|AAS69646.1| glutamate racemase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 256
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 9/223 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL VL+++ E +Y D PYG +D + L+ + L K
Sbjct: 7 IGLMDSGMGGLSVLKELLKYDSELEIVYYGDLKNSPYGE-KDASEVLELVRSVCNFLQKE 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ACNTA + LR F S+ G PAIK A +++L+TP T R
Sbjct: 66 NVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKVALLATPVTQREE 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L ++ + +S LA V++ D+ +K + + + + +
Sbjct: 125 KLQRLKSELKAEELVLSISCPGLAGLVDQGDF------DKAEKYLRPILANLQEQDVENL 178
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-LPRI 237
VL CTHY + + + P + NS +I L +PR+
Sbjct: 179 VLGCTHYVFLKQIILKNFPNVKIYDGNSGTIKHLLNSLQVPRV 221
>gi|123968208|ref|YP_001009066.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. AS9601]
gi|123198318|gb|ABM69959.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. AS9601]
Length = 264
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 19/254 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG +L + + Y+AD PYGN ++ + + +DK
Sbjct: 5 IGIFDSGIGGFTILNSLLKTRKDVKVFYLADTKRIPYGNKNSKEIRLIAKEICTFFVDKN 64
Query: 76 QPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ACNT A +++D L+ P + +V I +I +L+T T
Sbjct: 65 LDAL-LVACNTTNACALDILEDNLK--VPCFDLINSVSEI------VDKQIIGVLATQRT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y I++ I S +E+ K+ D++ + K
Sbjct: 116 VRSSYYKKAINAKKGNTIIFQQECPEFVSEIEKE----KLNLDKLNSLSDLYLRPLINKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR--ARCLLPRINTHQTRVFDDHA 249
+ ++L C+HYPLI FR+ + +D S ++ ++ + + ++++ +++
Sbjct: 172 IEELILGCSHYPLIYDFFRKKLDSNIKIIDPSVALIKKFNESFAISKTTSYESLFYENVD 231
Query: 250 LFLSGKPDIAMRRL 263
F++ + D ++++
Sbjct: 232 FFVTSEKDKFLKKV 245
>gi|291546372|emb|CBL19480.1| glutamate racemase [Ruminococcus sp. SR1/5]
Length = 273
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 21/239 (8%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILDKY 75
+FDSGIGGL V +++ +P +Y D PYG+ + + R + F L +
Sbjct: 11 VFDSGIGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSRETVIRYSRQIIHF---LQEQ 67
Query: 76 QPVLSVIACNT--AFTL--IKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130
+ V+ACNT AF L +KDEL + LG + A K AA T++ + I+ T
Sbjct: 68 KVKAIVVACNTASAFALDAVKDEL-----DIPILGVIEAGAKVAAQETRNKRVGIIGTVG 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEG 189
T+ ++ + + + + + VEE D + +E+ ++ E +
Sbjct: 123 TVGSGIHASYLKELDPEITVIGKACPLFVPLVEE-----GWYHDPVTEEVARRYLKELQE 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D ++L CTHYPL+ R++ V ++ + A + LL R++ V +
Sbjct: 178 QEIDTLILGCTHYPLLRSTIRKIMGEEVCLVNPAYETALELKKLLSRLDLSSNEVAQEE 236
>gi|126701188|ref|YP_001090085.1| glutamate racemase [Clostridium difficile 630]
gi|254977188|ref|ZP_05273660.1| glutamate racemase [Clostridium difficile QCD-66c26]
gi|255094517|ref|ZP_05323995.1| glutamate racemase [Clostridium difficile CIP 107932]
gi|255102774|ref|ZP_05331751.1| glutamate racemase [Clostridium difficile QCD-63q42]
gi|255308595|ref|ZP_05352766.1| glutamate racemase [Clostridium difficile ATCC 43255]
gi|255316269|ref|ZP_05357852.1| glutamate racemase [Clostridium difficile QCD-76w55]
gi|255518930|ref|ZP_05386606.1| glutamate racemase [Clostridium difficile QCD-97b34]
gi|255652109|ref|ZP_05399011.1| glutamate racemase [Clostridium difficile QCD-37x79]
gi|260685082|ref|YP_003216367.1| glutamate racemase [Clostridium difficile CD196]
gi|260688740|ref|YP_003219874.1| glutamate racemase [Clostridium difficile R20291]
gi|306521843|ref|ZP_07408190.1| glutamate racemase [Clostridium difficile QCD-32g58]
gi|115252625|emb|CAJ70468.1| Glutamate racemase [Clostridium difficile]
gi|260211245|emb|CBA66775.1| glutamate racemase [Clostridium difficile CD196]
gi|260214757|emb|CBE07455.1| glutamate racemase [Clostridium difficile R20291]
Length = 268
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 12/246 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ ++P IY D PYG+ + K F + L
Sbjct: 6 IGVFDSGLGGLTVLKEIMKILPNEDIIYFGDTARIPYGSRSKETIIK-YTFQAINFLKTK 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
VIACNTA E + + + +G + A + A + T++ ++ I+ T T+
Sbjct: 65 GVKAIVIACNTATARSLKEAQEKY-DIPIIGVIEAGARTAVSSTKNKIVGIIGTEGTI-S 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL S + + I +V+ + VEE ++ + K ++ E + K
Sbjct: 123 SKAYNLEISKIDES-IEIVNKACPLFVPIVEEGWANTEVAKLTAKIYLQ----ELKEKNI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251
D +VL CTHYP++ + + ++ + A+ + +L N + T + + +
Sbjct: 178 DSLVLGCTHYPILKRTIGEEVGEHIKLVNPAKETAKDLKKILEVQNIINNTEIHGTYQYY 237
Query: 252 LSGKPD 257
+S P+
Sbjct: 238 VSDIPE 243
>gi|56708260|ref|YP_170156.1| glutamate racemase [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110670731|ref|YP_667288.1| glutamate racemase [Francisella tularensis subsp. tularensis
FSC198]
gi|134302177|ref|YP_001122146.1| glutamate racemase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|224457380|ref|ZP_03665853.1| glutamate racemase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370745|ref|ZP_04986750.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254875080|ref|ZP_05247790.1| glutamate racemase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|56604752|emb|CAG45830.1| glutamate racemase [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110321064|emb|CAL09213.1| glutamate racemase [Francisella tularensis subsp. tularensis
FSC198]
gi|134049954|gb|ABO47025.1| glutamate racemase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151568988|gb|EDN34642.1| hypothetical protein FTBG_00552 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841079|gb|EET19515.1| glutamate racemase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159487|gb|ADA78878.1| glutamate racemase [Francisella tularensis subsp. tularensis
NE061598]
Length = 265
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL +++ + ++P IY D PYG ++K
Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQK 53
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
++D+ + +IACNT + KD ++ ++ + + A +
Sbjct: 54 FAAQTAKFLIDQEVKAI-IIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++TPAT+ + IH ++ + S +EE I E + KE
Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVE-LVAKEYLS 169
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
F K ++L CTHYP+I
Sbjct: 170 YF---HDKNIQALILGCTHYPII 189
>gi|215276268|ref|YP_002332231.1| putative glutamate racemase [Escherichia coli O127:H6 str.
E2348/69]
gi|312964743|ref|ZP_07778984.1| glutamate racemase [Escherichia coli 2362-75]
gi|215267864|emb|CAS07533.1| putative glutamate racemase [Escherichia coli O127:H6 str.
E2348/69]
gi|312290592|gb|EFR18471.1| glutamate racemase [Escherichia coli 2362-75]
Length = 269
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
++ I + DSG+GGL ++++ L+P IY D+ PYGN + KK L FL
Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFLQ 64
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124
S + L +ACNT + ++ E S +FP L + + Q +
Sbjct: 65 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 118
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
I++T T++ LI +I S LA +EE ++IKK +
Sbjct: 119 IIATEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ I+L CTHYP++ ++F ++P
Sbjct: 179 ---SLHPVNEIILGCTHYPIVQNLFEAVAP 205
>gi|194430317|ref|ZP_03062810.1| glutamate racemase [Escherichia coli B171]
gi|194411647|gb|EDX27976.1| glutamate racemase [Escherichia coli B171]
Length = 269
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
++ I + DSG+GGL ++++ L+P IY D+ PYGN + KK L FL
Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFLQ 64
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124
S + L +ACNT + ++ E S +FP L + + Q +
Sbjct: 65 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 118
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
I++T T++ LI +I S LA +EE ++IKK +
Sbjct: 119 IIATEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ I+L CTHYP++ ++F ++P
Sbjct: 179 ---SLHPVNEIILGCTHYPIVQNLFEAVAP 205
>gi|197693730|gb|ACH71534.1| glutamate racemase [Helicobacter pylori]
gi|197693732|gb|ACH71535.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQIK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ + N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LEILPEVVILGCTHFPLIAH 189
>gi|190014952|ref|YP_001965464.1| Putative glutamate racemase [Escherichia coli]
gi|109389673|gb|ABG29592.1| Putative glutamate racemase [Escherichia coli]
Length = 273
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
++ I + DSG+GGL ++++ L+P IY D+ PYGN + KK L FL
Sbjct: 9 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFLQ 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLIS 124
S + L +ACNT + ++ E S +FP L + + Q +
Sbjct: 69 SRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVG 122
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
I++T T++ LI +I S LA +EE ++IKK +
Sbjct: 123 IIATEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLI 182
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ I+L CTHYP++ ++F ++P
Sbjct: 183 ---SLHPVNEIILGCTHYPIVQNLFEAVAP 209
>gi|27467761|ref|NP_764398.1| glutamate racemase [Staphylococcus epidermidis ATCC 12228]
gi|251810598|ref|ZP_04825071.1| glutamate racemase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876402|ref|ZP_06285269.1| glutamate racemase [Staphylococcus epidermidis SK135]
gi|293366868|ref|ZP_06613544.1| glutamate racemase [Staphylococcus epidermidis M23864:W2(grey)]
gi|29839516|sp|Q8CPL0|MURI_STAES RecName: Full=Glutamate racemase
gi|27315305|gb|AAO04440.1|AE016746_230 glutamate racemase [Staphylococcus epidermidis ATCC 12228]
gi|251805758|gb|EES58415.1| glutamate racemase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295427|gb|EFA87954.1| glutamate racemase [Staphylococcus epidermidis SK135]
gi|291319169|gb|EFE59539.1| glutamate racemase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329730002|gb|EGG66393.1| glutamate racemase [Staphylococcus epidermidis VCU144]
gi|329734459|gb|EGG70772.1| glutamate racemase [Staphylococcus epidermidis VCU045]
gi|329736265|gb|EGG72537.1| glutamate racemase [Staphylococcus epidermidis VCU028]
Length = 267
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 9/246 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +KK L +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKKFTTELAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L++ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALNYLQNILP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189
T++ I +++ V+ VE+ ++ K+ I I +
Sbjct: 119 TIKSEAYRTHIKKINPNVNVYSVACPGFVPLVEQ----MRYKDPTITNIVIHQTLKQWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
D ++L CTHYPL+ + + + AR LL N H + H
Sbjct: 175 SDADTVILGCTHYPLLYQPIYEYFSGTKTVISSGLETAREVSALLTFSNEHASYTEHPQH 234
Query: 249 ALFLSG 254
F +G
Sbjct: 235 RFFATG 240
>gi|315640905|ref|ZP_07896001.1| glutamate racemase [Enterococcus italicus DSM 15952]
gi|315483323|gb|EFU73823.1| glutamate racemase [Enterococcus italicus DSM 15952]
Length = 272
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 7/233 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++ +P + IY+ D PYG + + +L+K +
Sbjct: 10 IDSGVGGLTVVKEALKQLPNENIIYLGDTARCPYGPRPAEQVIAFTWEMTRFLLNKNIKM 69
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACNTA + +E++ T S+ +G + P + A T + I ++ T T++
Sbjct: 70 L-VIACNTATAVALEEIKKTL-SIPVIGVILPGSRAAIKATHTNQIGVIGTEGTIKSASY 127
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
++ + I ++ VE + + + + + + EK+ D ++L
Sbjct: 128 ERVLQEKSPKAKILSLACPKFVPIVESNQFQTSVAKKIVAESLR--YFEKQ--PVDTLIL 183
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
CTHYP++ + + + V +D+ LL T + + ++
Sbjct: 184 GCTHYPILRPLIQNVMGSKVKLIDSGAETVGEVSTLLDYFQMANTTLTTERSM 236
>gi|195953669|ref|YP_002121959.1| glutamate racemase [Hydrogenobaculum sp. Y04AAS1]
gi|229486240|sp|B4UA20|MURI_HYDS0 RecName: Full=Glutamate racemase
gi|195933281|gb|ACG57981.1| glutamate racemase [Hydrogenobaculum sp. Y04AAS1]
Length = 259
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 31/223 (13%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG+GGL VL+ +R + + +Y+ D PYG + K+ FL +
Sbjct: 3 IGMFDSGVGGLTVLKSVRKVYDKVDIVYLGDTARVPYGIKSKETIITYAKESANFLINQN 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130
+D + +IACN+ + L+ F + +G + A ++ A +++ + I+ T A
Sbjct: 63 VD-----VILIACNSVSANAMEALQEMF-DIPIVGVIEAGVEAALKSSKTKHVGIIGTSA 116
Query: 131 TLRRT-YTSNL----IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
T+ Y L I +Y C + +V ++ + + + A +KE
Sbjct: 117 TINSNKYQERLEAFNIKTYAKACPLFVPIVEEKLINTDISKKAVEFYLKE---------- 166
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
K+ K D ++L CTHYPL+ + P ++ + +SD+I
Sbjct: 167 --FKDLKDIDTLILGCTHYPLLEEDIKAFLPH-INLVSSSDAI 206
>gi|309388889|gb|ADO76769.1| glutamate racemase [Halanaerobium praevalens DSM 2228]
Length = 277
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I + DSG+GGL V ++ +P + +Y D + PYG ++ + + + ++
Sbjct: 6 KKAIGLLDSGVGGLTVAFEIFKFLPRENIVYFGDTLHLPYGPKSLSVVRTYVEKIINYLI 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + +IACNTA + D ++ F F A +A T+ I+++ T T+
Sbjct: 66 EEKKVKAIIIACNTATSAALDYVKDKFEVPIFGMIKRAAFKAVTLTKKKKIAVIGTEGTI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I S ++ ++ + I V GI K E++K + +
Sbjct: 126 KSQVYQQAILSRNTEIEVY---TRICPEFVTLVEAGI-FKGPEVRKIADFYLKPLKNYGV 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHAL 250
D ++LACTH+P + + L V ++ + + + L +N ++ F H L
Sbjct: 182 DTLILACTHFPYLTPIIADLMGAKVKLVNPASELVAELQNTLSNLNLLNSQNDNFTQHQL 241
Query: 251 FLSGKPDIAMRRLMQG 266
+S K I+ + L G
Sbjct: 242 LVSKKQKISTKFLQNG 257
>gi|229149186|ref|ZP_04277427.1| Glutamate racemase [Bacillus cereus m1550]
gi|228634385|gb|EEK90973.1| Glutamate racemase [Bacillus cereus m1550]
Length = 276
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALNALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLEVHSYACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ + + +++ A +L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|208779829|ref|ZP_03247173.1| glutamate racemase [Francisella novicida FTG]
gi|254373122|ref|ZP_04988611.1| glutamate racemase [Francisella tularensis subsp. novicida
GA99-3549]
gi|151570849|gb|EDN36503.1| glutamate racemase [Francisella novicida GA99-3549]
gi|208744284|gb|EDZ90584.1| glutamate racemase [Francisella novicida FTG]
Length = 265
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL +++ + ++P IY D PYG + A +
Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGT-KSRATIQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + L + + +IACNT + KD ++ ++ + + A +
Sbjct: 53 KFAAQTAKFLIEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++TPAT+ + IH ++ + S +EE +I E + KE
Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVE-LVAKEYLS 169
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
F K ++L CTHYP+I
Sbjct: 170 YF---HDKNIQALILGCTHYPII 189
>gi|123965917|ref|YP_001010998.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9515]
gi|123200283|gb|ABM71891.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9515]
Length = 264
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 15/246 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG +L + + Y+AD PYG+ + ++ + + DK
Sbjct: 5 IGIFDSGIGGFTILDYLLKTRKDLEIFYLADTKRVPYGDKDFEQIRIIAKEICNWFEDKN 64
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L ++ACNT D L + P + +V I I +L+TPAT++
Sbjct: 65 LDAL-LVACNTTNACALDILENHLGIPVFDLINSVSEI------VSKKCIGVLATPATIK 117
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+Y +I S + + S +E+ K+ +++ + K +
Sbjct: 118 TSYYKKIIESKGENIKVFQQACPEFVSEIEK----TKLNLNKLNYLSDSYLNPLFKKNIE 173
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR--ARCLLPRINTHQTRVFDDHALF 251
I+L CTHYPLI +V P + +D S ++ + L+P+ + + + ++ F
Sbjct: 174 EIILGCTHYPLIFNVLENKIPSNIKIIDPSVALVNKFNNSFLIPKNDCNNSISQENVKFF 233
Query: 252 LSGKPD 257
++ K +
Sbjct: 234 VTSKSE 239
>gi|15673264|ref|NP_267438.1| glutamate racemase [Lactococcus lactis subsp. lactis Il1403]
gi|13878595|sp|Q9CG28|MURI_LACLA RecName: Full=Glutamate racemase
gi|12724258|gb|AAK05380.1|AE006360_9 glutamate racemase [Lactococcus lactis subsp. lactis Il1403]
Length = 271
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 22/236 (9%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V +++ +P +Y+ D PYG +
Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ + +L K ++ V+ACNT A ++K++L + GA AI++ T
Sbjct: 53 FTWDMVNFLLSKDVKMI-VMACNTATAMALEIVKEKLDIPVIGVILPGASSAIQK----T 107
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ I +++T A++R I S ++ ++ S VE E EI +
Sbjct: 108 KTNKIGVIATQASIRSDEYHKTIARKSSAVEVYSLACPKFVSIVESNEM-----ESEIAR 162
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++ + + D ++L CTHYPL+ + ++ V +D+ R LL
Sbjct: 163 KVVSESLVPLIGKVDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLL 218
>gi|151567723|pdb|2JFQ|A Chain A, Crystal Structure Of Staphylococcus Aureus Glutamate
Racemase In Complex With D-Glutamate
gi|151567724|pdb|2JFQ|B Chain B, Crystal Structure Of Staphylococcus Aureus Glutamate
Racemase In Complex With D-Glutamate
Length = 286
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 9/251 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + I + DSG+GGL V +++ +P Y+ D PYG +K+ +
Sbjct: 16 PRGSHMNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVE 75
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
+ +++ + + VIACNTA + + L+ T S++ +G + P + A T++ + +
Sbjct: 76 IARKLME-FDIKMLVIACNTATAVALEYLQKTL-SISVIGVIEPGARTAIMTTRNQNVLV 133
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L T T++ I +H V+ VE+ ++ + I + +
Sbjct: 134 LGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQ----MRYSDPTITSIVIHQTL 189
Query: 186 EK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
++ +D ++L CTHYPL+ + + AR LL N H +
Sbjct: 190 KRWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYT 249
Query: 245 -FDDHALFLSG 254
DH F +G
Sbjct: 250 EHPDHRFFATG 260
>gi|52786718|ref|YP_092547.1| glutamate racemase [Bacillus licheniformis ATCC 14580]
gi|319647248|ref|ZP_08001470.1| RacE protein [Bacillus sp. BT1B_CT2]
gi|52349220|gb|AAU41854.1| RacE [Bacillus licheniformis ATCC 14580]
gi|317390595|gb|EFV71400.1| RacE protein [Bacillus sp. BT1B_CT2]
Length = 272
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 6/224 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L I + DSG+GGL V +++ +P+ IY+ D PYG + + + + +
Sbjct: 2 LDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYLGDTKRCPYGPRDRKEVLSYTWEMTNYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L ++ + VIACNTA + +E+ S ++ +G V P + A T++ I ++ T
Sbjct: 62 LSRHHIKMLVIACNTATAIALEEI-SREVAIPVIGVVQPGARTAIKVTENQRIGVIGTEN 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + ++ + VE K ++ + +
Sbjct: 121 TIKSGAYEEALLSLNGDLTVENLACPMFVPFVESG----KFLDETADEIVRTSLHPLRDS 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYP++ ++ V+ + + D AR +L
Sbjct: 177 SIDTLILGCTHYPILKEPIQRYMGERVNIISSGDETAREVSTIL 220
>gi|197693674|gb|ACH71506.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVE-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LKILPEVVILGCTHFPLIAH 189
>gi|206968268|ref|ZP_03229224.1| glutamate racemase [Bacillus cereus AH1134]
gi|206737188|gb|EDZ54335.1| glutamate racemase [Bacillus cereus AH1134]
Length = 276
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALNALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLEVHSYACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ + + +++ A +L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|255657512|ref|ZP_05402921.1| glutamate racemase [Clostridium difficile QCD-23m63]
gi|296452816|ref|ZP_06894503.1| glutamate racemase [Clostridium difficile NAP08]
gi|296879932|ref|ZP_06903904.1| glutamate racemase [Clostridium difficile NAP07]
gi|296258364|gb|EFH05272.1| glutamate racemase [Clostridium difficile NAP08]
gi|296429046|gb|EFH14921.1| glutamate racemase [Clostridium difficile NAP07]
Length = 268
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 12/246 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ ++P IY D PYG+ + K F + L
Sbjct: 6 IGVFDSGLGGLTVLKEIMKILPNEDIIYFGDTARIPYGSRSKETIIK-YTFQAINFLKTK 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
VIACNTA E + + + +G + A + A + T++ ++ I+ T T+
Sbjct: 65 GVKAIVIACNTATARSLKEAQEKY-DIPIIGVIEAGARTAVSSTKNKIVGIIGTEGTI-S 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL S + + I +V+ + VEE ++ + K ++ E + K
Sbjct: 123 SKAYNLEISKIDES-IEIVNKACPLFVPIVEEGWANTEVAKLTAKIYLQ----ELKEKNI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251
D +VL CTHYP++ + + ++ + A+ + +L N + T + + +
Sbjct: 178 DSLVLGCTHYPILKRTIGEEVGEHIKLVNPAKETAKDLKKVLEVKNIINNTEIHGTYQYY 237
Query: 252 LSGKPD 257
+S P+
Sbjct: 238 VSDIPE 243
>gi|317177617|dbj|BAJ55406.1| glutamate racemase [Helicobacter pylori F16]
Length = 255
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHV-------FRQLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H + LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEYFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|118497764|ref|YP_898814.1| glutamate racemase [Francisella tularensis subsp. novicida U112]
gi|194323736|ref|ZP_03057512.1| glutamate racemase [Francisella tularensis subsp. novicida FTE]
gi|118423670|gb|ABK90060.1| glutamate racemase [Francisella novicida U112]
gi|194322100|gb|EDX19582.1| glutamate racemase [Francisella tularensis subsp. novicida FTE]
Length = 265
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL +++ + ++P IY D PYG + A +
Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGT-KSRATIQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + L + + +IACNT + KD ++ ++ + + A +
Sbjct: 53 KFAAQTAKFLIEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++TPAT+ + IH ++ + S +EE +I E + KE
Sbjct: 111 VGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVE-LVAKEYLS 169
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
F K ++L CTHYP+I
Sbjct: 170 YF---HDKNIQALILGCTHYPII 189
>gi|255020717|ref|ZP_05292777.1| Glutamate racemase [Acidithiobacillus caldus ATCC 51756]
gi|254969833|gb|EET27335.1| Glutamate racemase [Acidithiobacillus caldus ATCC 51756]
Length = 274
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL L +P + + D PYG+ + +++ + L
Sbjct: 3 IGVFDSGLGGLSTLLACLRYLPSAEYRFFGDVAHAPYGDKDPQVVRRWTAEAYERFLAAG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA + LR P + LG PAIK+A +SG I +L+T T+R
Sbjct: 63 VDAV-VLACNTATSAAAAPLREQSP-VPILGLEPAIKKALD-VESGPILLLATTLTVRGD 119
Query: 136 YTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-IEGCFIEKEGKRTD 193
L+ +Q + V+ L VE + + + +E + F+E R
Sbjct: 120 KLRALLQRMDGAQQRVRAVACPGLMEIVEAQTTDWRAQAESYWRERLLPHFVE---LRPK 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWL-------DNSDSIAR 228
+VL CTHY + FR DW+ D +D +AR
Sbjct: 177 GLVLGCTHYCWLEDAFR-------DWVGPGCRVYDGNDGLAR 211
>gi|282856714|ref|ZP_06265980.1| glutamate racemase [Pyramidobacter piscolens W5455]
gi|282585479|gb|EFB90781.1| glutamate racemase [Pyramidobacter piscolens W5455]
Length = 267
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWED----HALKKRLMFLFSDILD 73
+FDSG+GG V+++++ ++P +Y D PYGN H ++ L F L+
Sbjct: 9 VFDSGVGGFSVVKEIQKVLPGEDVLYYGDSANMPYGNRSGEEILHLTRQILAF-----LE 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + +ACNT +LI D R +P F + A + A + + ++ T T R
Sbjct: 64 RRGVKAAAVACNTISSLI-DRYRDDYPFKIF-SVIEAGAASVATLDADCVGVIGTVFTAR 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
LI++ + ++ LA ++ + + E++ +E + +
Sbjct: 122 SGAYHRLINAVRPEMKVYAQGCPNLARLIDGGDLRPESIDPELRAAVEPLLAQAPIRH-- 179
Query: 194 VIVLACTHYPLIVHVFRQLSP 214
++L CTHYPL+ +L P
Sbjct: 180 -LILGCTHYPLVSGYLNRLYP 199
>gi|317180321|dbj|BAJ58107.1| glutamate racemase [Helicobacter pylori F32]
Length = 255
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALGEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT+R N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYLMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|322417854|ref|YP_004197077.1| glutamate racemase [Geobacter sp. M18]
gi|320124241|gb|ADW11801.1| glutamate racemase [Geobacter sp. M18]
Length = 279
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 10/222 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L++
Sbjct: 5 AIGIFDSGVGGLTVLKEVVQALPQEDTIYLGDTARVPYGTKSPETVIRYSRQIARYLLNR 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+L V+ACNTA + L+ F + +G + P + AAA T++G + ++ T AT+
Sbjct: 65 DIKLL-VVACNTASAVALSALQQEF-DIPIVGVIEPGARAAAAATRTGRVGVIGTAATVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRT 192
+ + I + + + EE ++++ + ++E + +
Sbjct: 123 SSAYTKAIKRINPDIEVVNRACPLFVPLAEEGWV-----DNDVARMTARLYLEDLKQQGV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCL 233
D +VL CTHYP++ V Q+ V +D++ AR AR L
Sbjct: 178 DTLVLGCTHYPILKEVIAQVMGPEVTLVDSAAETARTVARIL 219
>gi|225549352|ref|ZP_03770325.1| glutamate racemase [Borrelia burgdorferi 94a]
gi|225370210|gb|EEG99650.1| glutamate racemase [Borrelia burgdorferi 94a]
Length = 305
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTS---NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+++T TL + N+ + + + LV+ + ++YA + +
Sbjct: 156 LLIATNTTLESKFVKDQVNIHNDLIVKAAGELVNFVEYGENYKKYAL----------RCL 205
Query: 181 EGCFIEKEGKRTDVIVLACTHY 202
E E +++ L CTHY
Sbjct: 206 EALKFEVVNTGREIVFLGCTHY 227
>gi|197693548|gb|ACH71443.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
+VI+L CTH+PLI RQ+ +
Sbjct: 173 LPEVIILGCTHFPLIA---RQIESY 194
>gi|218249889|ref|YP_002374628.1| glutamate racemase [Borrelia burgdorferi ZS7]
gi|226321989|ref|ZP_03797514.1| glutamate racemase [Borrelia burgdorferi Bol26]
gi|218165077|gb|ACK75138.1| glutamate racemase [Borrelia burgdorferi ZS7]
gi|226232579|gb|EEH31333.1| glutamate racemase [Borrelia burgdorferi Bol26]
Length = 305
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTS---NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+++T TL + N+ + + + LV+ + ++YA + +
Sbjct: 156 LLIATNTTLESKFVKDQVNIHNDLIVKAAGELVNFVEYGENYKKYAL----------RCL 205
Query: 181 EGCFIEKEGKRTDVIVLACTHY 202
E E +++ L CTHY
Sbjct: 206 EALKFEVVNTGREIVFLGCTHY 227
>gi|296129171|ref|YP_003636421.1| glutamate racemase [Cellulomonas flavigena DSM 20109]
gi|296020986|gb|ADG74222.1| glutamate racemase [Cellulomonas flavigena DSM 20109]
Length = 285
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 23/223 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+ D + PYG A++ + + D++D
Sbjct: 21 IGIFDSGVGGLTVARAVLDQLPHESTLYIGDTLNGPYGPKPLAAVRAHALEIMDDLVDAG 80
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L VIACN+A + + R + L V PA ++A A T++G I ++ T AT
Sbjct: 81 VKML-VIACNSASAAVLRDARERYTVRRGLPVVEVVLPAARRAVAATRNGRIGVIGTRAT 139
Query: 132 LR-RTYTSNLIHSYVSQCHIHLVSSMILASR-----VEEYACGIKIKEDEIKKEIEGCFI 185
+ R Y V+ + L SR VE G+ D + E
Sbjct: 140 VESRAYDDAFA-----------VAGVDLTSRACPRFVELVEAGVTSGPDALATAHEYLDP 188
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++ D +VL CTHYPL+ V + V + +++ A+
Sbjct: 189 VRQAG-VDTLVLGCTHYPLLTGVISYVMGDQVTLVSSAEETAK 230
>gi|312149583|gb|ADQ29654.1| glutamate racemase [Borrelia burgdorferi N40]
Length = 261
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 21/198 (10%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 2 KNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLIE 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 62 KLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIATN 117
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGCF 184
TL + + Q +IH + +I+ + E EY G K+D + +E
Sbjct: 118 TTLESKFVKD-------QVNIH--NDLIVKAAGELVNFVEY--GENYKKDAFRC-LEALK 165
Query: 185 IEKEGKRTDVIVLACTHY 202
E +++ L CTHY
Sbjct: 166 FEVVNTGREIVFLGCTHY 183
>gi|170077204|ref|YP_001733842.1| glutamate racemase [Synechococcus sp. PCC 7002]
gi|229486281|sp|B1XPV8|MURI_SYNP2 RecName: Full=Glutamate racemase
gi|169884873|gb|ACA98586.1| glutamate racemase [Synechococcus sp. PCC 7002]
Length = 279
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 7/217 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q+ I IFDSG+GG+ VL+ + +P+ IY AD PYG+ L + + + +
Sbjct: 3 NQQQHPIGIFDSGLGGITVLRALYRQLPQESIIYFADTARLPYGDRSPEELIQYVREILT 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ + V+ACNT+ + D +RS F + +P + A +Q I +++T
Sbjct: 63 -WMEAQGVKMVVMACNTSSAIALDVIRSEFKTPVLGLILPGAR--GAVSQGKRIGVIATQ 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ N I + + + +E +I + K+ ++
Sbjct: 120 ATVNSGAYENAILEANPEAAVWQMPCPEFVPLIEAN----RINDPHTKRIVQKRLQPLLE 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
+ D +V CTHY + V + + P V +D ++ +
Sbjct: 176 QGIDTLVYGCTHYRHLSGVIQSILPSHVICVDPAEYV 212
>gi|260587549|ref|ZP_05853462.1| glutamate racemase [Blautia hansenii DSM 20583]
gi|331084204|ref|ZP_08333310.1| glutamate racemase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260541814|gb|EEX22383.1| glutamate racemase [Blautia hansenii DSM 20583]
gi|330402059|gb|EGG81632.1| glutamate racemase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 273
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 11/222 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK--RLMFLFSDILD 73
I +FDSG+GGL V +++ +P +Y D PYG+ + + R + F L
Sbjct: 9 IGVFDSGVGGLTVAREIMRNLPHEKIVYFGDTARVPYGSKSKETILRYSRQIVRF---LQ 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA L + + + +G V P K AA T++ I ++ T AT+
Sbjct: 66 TQEVKAIVVACNTASALALETISEEI-DIPIIGVVKPGAKVAAQTTRNKKIGLIGTRATV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + + + VEE + E+ K +EK+
Sbjct: 125 KSDLYRKTIQAENPEIEVIGQPCPLFVPLVEEGWLKDSVT-IEVAKRYLAPLLEKD---I 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYPL+ + L V ++ + A+ + LL
Sbjct: 181 DTLILGCTHYPLLRSTLKTLVGDGVTLVNPAYETAKELQRLL 222
>gi|86149468|ref|ZP_01067699.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596590|ref|ZP_01099827.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 84-25]
gi|218563241|ref|YP_002345021.1| glutamate racemase [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|11386947|sp|Q9PM24|MURI_CAMJE RecName: Full=Glutamate racemase
gi|85840250|gb|EAQ57508.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88191431|gb|EAQ95403.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360948|emb|CAL35749.1| glutamate racemase [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|284926846|gb|ADC29198.1| glutamate racemase [Campylobacter jejuni subsp. jejuni IA3902]
gi|315927597|gb|EFV06928.1| glutamate racemase [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315929474|gb|EFV08670.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 305]
Length = 250
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + D +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-DFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++
Sbjct: 62 QIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121
Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y L+ +I+ +++ + VEE GI + D ++ +E F K
Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218
D ++LACTH+PL+ R LS + D
Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196
>gi|315607047|ref|ZP_07882051.1| glutamate racemase [Prevotella buccae ATCC 33574]
gi|315251101|gb|EFU31086.1| glutamate racemase [Prevotella buccae ATCC 33574]
Length = 278
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 13/231 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + F ++
Sbjct: 8 GPIGIFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGT---RSFDVVYQFTRQAVIK 64
Query: 74 KYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
++ L ++ CNTA ++ ++ P LG + P + T++ + +
Sbjct: 65 LFEMGCHLVILGCNTASAKALRSIQHRDIPELDPGRRVLGVIRPTAEVIGELTRNNHVGL 124
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+T T+R + I + V+ VE + +KK ++ +
Sbjct: 125 FATEGTVRSCSYNLEIGKLWPDIKVTGVACPFWVPLVEYNEADSPGADYFVKKRVDE--L 182
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ D I+L CTHYPL++ + P V + + +A + R
Sbjct: 183 MRKDPEIDTIILGCTHYPLLMPKILKYVPPGVRIIPQGEYVADSLKAYFER 233
>gi|148925791|ref|ZP_01809479.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8486]
gi|145845801|gb|EDK22892.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8486]
Length = 247
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + D +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-DFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++
Sbjct: 62 QIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121
Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y L+ +I+ +++ + VEE GI + D ++ +E F K
Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218
D ++LACTH+PL+ R LS + D
Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196
>gi|228984040|ref|ZP_04144229.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228775720|gb|EEM24097.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 284
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 76
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 77 PLKALVVACNTAAAAALAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 135
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 136 NMYEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTEEDI 189
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 190 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 249
Query: 253 SG 254
+G
Sbjct: 250 TG 251
>gi|33862666|ref|NP_894226.1| putative aspartate and glutamate racemase:glutamate racemase
[Prochlorococcus marinus str. MIT 9313]
gi|33634582|emb|CAE20568.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9313]
Length = 268
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 20/223 (8%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+++ + +Y+ D PYGN H ++ + + D+ Q
Sbjct: 7 LFDSGVGGLTVLRRVLERHGQVPCLYLGDTARVPYGNRMPHEIRVIAKEVVQWLRDQ-QV 65
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA---IKQAAAYTQSGLISILSTPATLRR 134
V+ACNT L D + A G +P I+ AA + +L+T
Sbjct: 66 TAVVMACNTTNALASDV------AEAVAGRIPVVRLIEAAANMLSEERVGVLAT------ 113
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI---KIKEDEIKKEIEGCFIEKEGKR 191
+ +Y Q I +M++ + I ++ +E+ + +
Sbjct: 114 -PAAAASGAYGKQIEISRPGTMVIEQGCPAFVPLIETGQLSSEELYQAAREYLNPLLAAQ 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ +VL CTHYPL+ + RQ+ P V +D + +AR LL
Sbjct: 173 VEAVVLGCTHYPLLEPILRQILPQDVRLIDPAIGVARELDVLL 215
>gi|229095486|ref|ZP_04226477.1| Glutamate racemase [Bacillus cereus Rock3-29]
gi|228688032|gb|EEL41919.1| Glutamate racemase [Bacillus cereus Rock3-29]
Length = 275
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|262201908|ref|YP_003273116.1| glutamate racemase [Gordonia bronchialis DSM 43247]
gi|262085255|gb|ACY21223.1| glutamate racemase [Gordonia bronchialis DSM 43247]
Length = 254
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 13/244 (5%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL V + + L+P+ +Y+ D PYG +++ + + D+ + + VI
Sbjct: 1 MGGLTVARAIIDLLPDEDIVYIGDTANGPYGPLTIPEIRRHALAIGDDLAARGVKAI-VI 59
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL-RRTYTSNL 140
ACNTA + R + + + V PA+++A T++G I ++ T AT+ R Y +
Sbjct: 60 ACNTASAACLRDARERYAPIPVVEVVLPAVRRAVVATKTGRIGVIGTEATIASRAYQDSF 119
Query: 141 IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ +++++ V+ GI +I +G + D +VL CT
Sbjct: 120 -----AAARDAVITAVACPRFVDFVERGITSGR-QILGLAQGYLEPLQEAGVDTVVLGCT 173
Query: 201 HYPLIVHVFRQLSPWPVDWLDNSDSIAR---RARCLLPRINTHQTRVFDDHALFLSGKPD 257
HYPL+ V + V + +++ A+ R +++H RV D +G P+
Sbjct: 174 HYPLLSGVIQLAMGDEVTLVSSAEETAKDLFRVLTEADLLHSHSDRVA-DRVFQATGDPE 232
Query: 258 IAMR 261
R
Sbjct: 233 FFAR 236
>gi|254758420|ref|ZP_05210447.1| glutamate racemase [Bacillus anthracis str. Australia 94]
Length = 276
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSAILQHKGILADNLNPKHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|227432402|ref|ZP_03914392.1| glutamate racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
gi|227351841|gb|EEJ42077.1| glutamate racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
Length = 291
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 7/238 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSGIGGL V+++ + +P IY+ D PYG + + + ++
Sbjct: 17 NNPIGLVDSGIGGLTVVKESQKQLPNEQLIYIGDTARMPYGPRSEKEVIDYTFQMTHYLV 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA +LR + +G + P + A + +Q+ I +++T T
Sbjct: 77 NEQNIKMLVIACNTATARALSQLREQL-CIPVIGVIQPGAEAAVSISQNKKIGLIATQGT 135
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + I + + VE + DE ++ I +
Sbjct: 136 VESQVYNEKMLAIDNNVQITSQAEPEFVTLVENNLY----QSDEAREVIAHHLSAFKEAN 191
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTH+PL+ ++ V +D+ + L ++ H + V +H+
Sbjct: 192 IDTLILGCTHFPLLTPFIQEAVGSDVTLVDSGAKTVAVMKQYLDELDIH-SEVKHNHS 248
>gi|116617725|ref|YP_818096.1| glutamate racemase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|116096572|gb|ABJ61723.1| glutamate racemase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
Length = 291
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 7/238 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSGIGGL V+++ + +P IY+ D PYG + + + ++
Sbjct: 17 NNPIGLVDSGIGGLTVVKESQKQLPNEQLIYIGDTARMPYGPRSEKEVIDYTFQMAHYLV 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA +LR + +G + P + A + +Q+ I +++T T
Sbjct: 77 NEQNIKMLVIACNTATARALSQLREQL-CIPVIGVIQPGAEAAVSISQNKKIGLIATQGT 135
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + I + + VE + DE ++ I +
Sbjct: 136 VESQVYNEKMLAIDNNVQITSQAEPEFVTLVENNLY----QSDEAREVIAHHLSAFKEAN 191
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTH+PL+ ++ V +D+ + L ++ H + V +H+
Sbjct: 192 IDTLILGCTHFPLLTPFIQEAVGSDVTLVDSGAKTVAVMKQYLDELDIH-SEVKHNHS 248
>gi|229177385|ref|ZP_04304768.1| Glutamate racemase [Bacillus cereus 172560W]
gi|228606108|gb|EEK63546.1| Glutamate racemase [Bacillus cereus 172560W]
Length = 284
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 76
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 77 PLKALVVACNTAAAAALNALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 135
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 136 NMYEKALHELDTYLEVHSYACPTLATVVENQL------EDTAYVTQQVKQALLPLMKEDI 189
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ + + +++ A +L + H F
Sbjct: 190 DTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 249
Query: 253 SG 254
+G
Sbjct: 250 TG 251
>gi|229195184|ref|ZP_04321959.1| Glutamate racemase [Bacillus cereus m1293]
gi|228588413|gb|EEK46456.1| Glutamate racemase [Bacillus cereus m1293]
Length = 284
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 76
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 77 PLKALVVACNTAAAAALAALQEAL-SVPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 135
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 136 NMYEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTEEDI 189
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 190 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 249
Query: 253 SG 254
+G
Sbjct: 250 TG 251
>gi|300362243|ref|ZP_07058419.1| glutamate racemase [Lactobacillus gasseri JV-V03]
gi|300353234|gb|EFJ69106.1| glutamate racemase [Lactobacillus gasseri JV-V03]
Length = 283
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 38/246 (15%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ K+
Sbjct: 18 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRS----KE 65
Query: 63 RLMFLFSD----ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117
++ L D +L K ++ + CNTA + ++ P + +G V + AAA
Sbjct: 66 EIISLTRDSVNFLLSKDVKII-IFGCNTATAVAMSTIQKEVP-LQIIGVVQSGALAAART 123
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE 175
T++ ++++ T AT+ HSY+ + V +V E+A + E++
Sbjct: 124 TETKNVAVIGTKATVNS-------HSYLKE-----VQYRDPEIQVSEFAQPKLAPLAEED 171
Query: 176 IKKEIEGCFIEKE-----GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+EI+ + + D +VL CTHYPL+ + +D +D +A+
Sbjct: 172 PAEEIKQAVVSESLAPLRNINYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYT 231
Query: 231 RCLLPR 236
+L R
Sbjct: 232 YNVLRR 237
>gi|288926935|ref|ZP_06420833.1| glutamate racemase [Prevotella buccae D17]
gi|288336294|gb|EFC74677.1| glutamate racemase [Prevotella buccae D17]
Length = 280
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 13/231 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + F ++
Sbjct: 10 GPIGIFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGT---RSFDVVYQFTRQAVIK 66
Query: 74 KYQPV--LSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
++ L ++ CNTA ++ ++ P LG + P + T++ + +
Sbjct: 67 LFEMGCHLVILGCNTASAKALRSIQHRDIPELDPDRRVLGVIRPTAEVIGELTRNNHVGL 126
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+T T+R + I + V+ VE + +KK ++ +
Sbjct: 127 FATEGTVRSCSYNLEIGKLWPDIKVTGVACPFWVPLVEYNEADSPGADYFVKKRVDE--L 184
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ D I+L CTHYPL++ + P V + + +A + R
Sbjct: 185 MRKDPEIDTIILGCTHYPLLMPKILKYVPPGVRIIPQGEYVADSLKAYFER 235
>gi|157363388|ref|YP_001470155.1| glutamate racemase [Thermotoga lettingae TMO]
gi|157313992|gb|ABV33091.1| glutamate racemase [Thermotoga lettingae TMO]
Length = 278
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG VLQK+ MP ++YVAD + PYG + +R+ + + + +
Sbjct: 3 IGVFDSGIGGFTVLQKLVEYMPHNEYVYVADTLYAPYGTKTHQQIFERVTRIINFLALQG 62
Query: 76 QPVLSVIACNTAFTLIK-DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V ACNTA ++K L + P + G + ++ + I + +T T++
Sbjct: 63 ADCI-VAACNTADAVLKLSSLSARIP--PYFGILDF---DINFSSAQCIGVAATELTIKS 116
Query: 135 -TYTSNLIHSYVS---QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
Y L++ +S Q + +I + V I+IKE CF + K
Sbjct: 117 GIYEKLLLNRGISKIIQRPCQKLVELIENNEVHGRQADIEIKE---------CF--EPFK 165
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D+++L CTH PL++ + + P + + D ++S+ +
Sbjct: 166 NADLVILGCTHLPLLIEKIQTIFP-KLRFYDPAESLVKN 203
>gi|225010450|ref|ZP_03700921.1| Glutamate racemase [Flavobacteria bacterium MS024-3C]
gi|225005279|gb|EEG43230.1| Glutamate racemase [Flavobacteria bacterium MS024-3C]
Length = 138
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG V + L+P IYVAD PYG + L +D L
Sbjct: 8 IGFFDSGVGGTSVWSAVNNLLPNESTIYVADSANAPYGERSAETILA-LSIKNTDFLISK 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA T LR + + F+G PAIK AA T +G + +L+T TL
Sbjct: 67 GCKLIVVACNTATTNAIAVLREKY-IIPFIGIEPAIKPAALQTLTGKVGLLATKGTLG-- 123
Query: 136 YTSNLIHSYV 145
S L H V
Sbjct: 124 --SALFHKTV 131
>gi|47564795|ref|ZP_00235839.1| glutamate racemase [Bacillus cereus G9241]
gi|47558168|gb|EAL16492.1| glutamate racemase [Bacillus cereus G9241]
Length = 276
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG A + +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGP-RSVAEVQSFVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAVALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|239985839|ref|ZP_04706503.1| putative glutamate racemase [Streptomyces roseosporus NRRL 11379]
Length = 261
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 81/196 (41%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G L + + +
Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDLTALALDVARAAAAQ- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P +IACNTA +R+ P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIIACNTASVHALPAIRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE E I + +
Sbjct: 120 PYQRGLIAEFGGSAEVTEVPCPGLADAVEHG------DEAGIDRTVAAAAALTP-PDVRA 172
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 173 VVLGCTHYELVATRIR 188
>gi|30260986|ref|NP_843363.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47526136|ref|YP_017485.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183830|ref|YP_027082.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|65318262|ref|ZP_00391221.1| COG0796: Glutamate racemase [Bacillus anthracis str. A2012]
gi|165871919|ref|ZP_02216561.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167635884|ref|ZP_02394192.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|167638901|ref|ZP_02397175.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|170687688|ref|ZP_02878904.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|170708261|ref|ZP_02898706.1| glutamate racemase [Bacillus anthracis str. A0389]
gi|177653883|ref|ZP_02935955.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190566741|ref|ZP_03019658.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|227816283|ref|YP_002816292.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|229604796|ref|YP_002865427.1| glutamate racemase [Bacillus anthracis str. A0248]
gi|254682956|ref|ZP_05146817.1| glutamate racemase [Bacillus anthracis str. CNEVA-9066]
gi|254734368|ref|ZP_05192081.1| glutamate racemase [Bacillus anthracis str. Western North America
USA6153]
gi|254739982|ref|ZP_05197674.1| glutamate racemase [Bacillus anthracis str. Kruger B]
gi|254753322|ref|ZP_05205358.1| glutamate racemase [Bacillus anthracis str. Vollum]
gi|150261200|pdb|2DWU|A Chain A, Crystal Structure Of Glutamate Racemase Isoform Race1 From
Bacillus Anthracis
gi|150261201|pdb|2DWU|B Chain B, Crystal Structure Of Glutamate Racemase Isoform Race1 From
Bacillus Anthracis
gi|150261202|pdb|2DWU|C Chain C, Crystal Structure Of Glutamate Racemase Isoform Race1 From
Bacillus Anthracis
gi|30254435|gb|AAP24849.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47501284|gb|AAT29960.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177757|gb|AAT53133.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|164712350|gb|EDR17885.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167513031|gb|EDR88403.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|167528701|gb|EDR91460.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|170126782|gb|EDS95664.1| glutamate racemase [Bacillus anthracis str. A0389]
gi|170668501|gb|EDT19248.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|172081111|gb|EDT66188.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190562293|gb|EDV16261.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|227007254|gb|ACP16997.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|229269204|gb|ACQ50841.1| glutamate racemase [Bacillus anthracis str. A0248]
Length = 276
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|73662954|ref|YP_301735.1| glutamate racemase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123642328|sp|Q49WR7|MURI_STAS1 RecName: Full=Glutamate racemase
gi|72495469|dbj|BAE18790.1| glutamate racemase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 269
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 113/263 (42%), Gaps = 9/263 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P Y+ D PYG+ E +++ L +
Sbjct: 1 MEKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIERCPYGSREGSEVRQFTTELAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ + + VIACNTA + + L++ P + +G + P + A T++ + IL T
Sbjct: 61 M-TFDIKMLVIACNTATAVALNHLQNILP-IPVIGVIEPGARTAIMTTKNNDVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189
T++ + I + + ++ A VE+ ++ K+ I I ++
Sbjct: 119 TIKSEAYRHHIKAINPNVEVTGIACPSFAPMVEQ----MRYKDPIITSIIIHQNLKHWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 175 SNADTVILGCTHYPLLYQPINDYFGGEKTVISSGLETAREVSALLTFSNEHAGYQRQPKH 234
Query: 249 ALFLSGKPDIAMRRLMQGFGLKS 271
F++G+ + R + + + +
Sbjct: 235 RFFVTGETEYIERIITEWLNISA 257
>gi|228913534|ref|ZP_04077163.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228846121|gb|EEM91143.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 279
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 13 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 71
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 72 PLKALVVACNTAAATALAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 130
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 131 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTEEDI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 185 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 244
Query: 253 SG 254
+G
Sbjct: 245 TG 246
>gi|153952642|ref|YP_001398928.1| glutamate racemase [Campylobacter jejuni subsp. doylei 269.97]
gi|152940088|gb|ABS44829.1| glutamate racemase [Campylobacter jejuni subsp. doylei 269.97]
Length = 247
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++
Sbjct: 62 QINMLIIACNTASAYALDVLRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121
Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y L+ Y +I+ +++ + VEE GI + D ++ +E F K
Sbjct: 122 SEEYQKRLL--YQGYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218
D ++LACTH+PL+ R LS + D
Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196
>gi|312140967|ref|YP_004008303.1| glutamate racemase [Rhodococcus equi 103S]
gi|325675397|ref|ZP_08155081.1| glutamate racemase [Rhodococcus equi ATCC 33707]
gi|311890306|emb|CBH49624.1| putative glutamate racemase [Rhodococcus equi 103S]
gi|325553368|gb|EGD23046.1| glutamate racemase [Rhodococcus equi ATCC 33707]
Length = 255
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G ++ + R++ +D+
Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLMLSLDPEGAPWGPRDERWVIDRVVGTARRAVDRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ V+ CNTA + +R+ S+ +G VPAIK AAA S ++I +T AT
Sbjct: 63 AEVV-VLPCNTASVTALEHVRADLGDSIPVIGTVPAIKPAAAVCDS--VAIWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHI-----HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
Y +NL+ + + + H ++ I VE I ++ G
Sbjct: 120 DYQANLVKEFANGSSVVGVACHGLADAIDLGDVEAARAAIAAAAARTPDDVTG------- 172
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+VL CTHYPL+ P V D+++++A
Sbjct: 173 -----VVLGCTHYPLVADEIAAHLPDGVALFDSAEAVA 205
>gi|183220317|ref|YP_001838313.1| glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189910434|ref|YP_001961989.1| glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167775110|gb|ABZ93411.1| Glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778739|gb|ABZ97037.1| Glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 270
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 19/192 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ + +IY D V PYG + + F +++K
Sbjct: 9 IGIFDSGLGGLSVLRTLWKETSNIDYIYFGDLVHSPYGQKSKQKVIELSKNAFEYLIEKD 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ + ACNTA + D LR S+ G PAIK A A I++ +T TL+
Sbjct: 69 CEAV-LFACNTATSAAADFLRKEH-SIPIFGMEPAIKPALAENPGVKIAVFATDLTLKEE 126
Query: 136 YTSNLIHSYVSQCHIHLV-----SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
NL+ I V + +I + R E+ + K +K E
Sbjct: 127 KFKNLVTGLAKGSEILPVPCEGLAKLIDSDRWEDAWDFLDSKIKLVKSE----------- 175
Query: 191 RTDVIVLACTHY 202
T++IVL CTHY
Sbjct: 176 -TEIIVLGCTHY 186
>gi|239939360|ref|ZP_04691297.1| putative glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|291442794|ref|ZP_06582184.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|291345741|gb|EFE72645.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
Length = 261
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 81/196 (41%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G L + + +
Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDLTALALDVARAAAAQ- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P +IACNTA +R+ P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIIACNTASVHALPAIRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE E I + +
Sbjct: 120 PYQRGLIAEFGGSAEVTEVPCPGLADAVEHG------DEAGIDRTVAAAAALTP-PDVRA 172
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 173 VVLGCTHYELVATRIR 188
>gi|327332416|gb|EGE74152.1| glutamate racemase [Propionibacterium acnes HL097PA1]
Length = 284
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYDVSVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMAESG 229
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+ D FL+ + + RRLM+GF
Sbjct: 230 LLHSHPRDSSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|49476942|ref|YP_035099.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49328498|gb|AAT59144.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 276
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA T L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAATATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLTEEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|295105836|emb|CBL03379.1| glutamate racemase [Gordonibacter pamelaeae 7-10-1-b]
Length = 313
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 27/273 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL V +++ +P +Y+ D PYG + + + ++D+
Sbjct: 35 IGVFDSGFGGLTVARELAKALPRESIVYLGDSARCPYGPRTLQEVDGFVQQIGGWLVDRG 94
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR- 133
++ VIACNTA + TFP + +G V P + AA T++ + +++T AT+
Sbjct: 95 VKMV-VIACNTATAAGLAHAQRTFP-VPVIGVVEPGARAAAHATRNNRVGVVATKATVES 152
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---------------K 178
YT + H V S VE GI++ E ++ +
Sbjct: 153 NAYTKAIRHLDAGIT----VFSTATPRFVEIAEQGIRMAEGPLENYTSLASKVYIRPAFE 208
Query: 179 EIEGCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
EI ++E D +VL CTH+PL+ + + V + +S AR +L R
Sbjct: 209 EIAREYLEPLRRAGVDTLVLGCTHFPLLKALIGGVMGREVTLISSSTEAARDVAEILARR 268
Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ + + F + D+ R GFG +
Sbjct: 269 SAYARADHEARYEFFTTGDDLEEFR---GFGSR 298
>gi|70726812|ref|YP_253726.1| glutamate racemase [Staphylococcus haemolyticus JCSC1435]
gi|123659934|sp|Q4L5F5|MURI_STAHJ RecName: Full=Glutamate racemase
gi|68447536|dbj|BAE05120.1| Glutamate racemase [Staphylococcus haemolyticus JCSC1435]
Length = 266
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 9/246 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ L + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGDEVKQFTTQLANKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ ++ + VIACNTA + + L+ P + +G + P + A T++ + IL T
Sbjct: 61 M-QFDIKMLVIACNTATAVALEHLQQMLP-IPVIGVIEPGSRTAIMTTKNQNVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189
T++ + I H++ V+ VE+ ++ + I I +
Sbjct: 119 TIKSEAYRHHIKHINPNVHVYGVACPGFVPLVEQ----MRYDDPTITSIVIHQTLKQWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
D I+L CTHYPL+ + + AR LL N H + +H
Sbjct: 175 TDADTIILGCTHYPLLYKPINDYFGGEKKVISSGLETAREVSALLTFSNEHASYTQHPEH 234
Query: 249 ALFLSG 254
F +G
Sbjct: 235 RFFATG 240
>gi|282916399|ref|ZP_06324161.1| glutamate racemase [Staphylococcus aureus subsp. aureus D139]
gi|282319839|gb|EFB50187.1| glutamate racemase [Staphylococcus aureus subsp. aureus D139]
Length = 266
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 33/258 (12%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGQCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ I I + K
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYS--------DPTITSIVIHQTLK 170
Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPV-DWLDNSDSI-------ARRARCLLPRI 237
R +D ++L CTHYPL+ P+ D+ D ++ AR LL
Sbjct: 171 RWRNSESDTVILGCTHYPLLYK--------PIYDYFDGKKTVISSGLETAREVSALLTFS 222
Query: 238 NTHQTRV-FDDHALFLSG 254
N H + DH F +G
Sbjct: 223 NEHASYTEHPDHRFFATG 240
>gi|116494343|ref|YP_806077.1| bifunctional glutamate racemase/xanthosine/inosine pyrophosphatase
[Lactobacillus casei ATCC 334]
gi|116104493|gb|ABJ69635.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family [Lactobacillus casei ATCC 334]
Length = 484
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
K+ +L VIACNT A LIK L + +G + P + A TQ+G I I++
Sbjct: 63 KKHIKML-VIACNTATAAALPLIKANL-----DIPVIGVIKPGSRAALKATQTGHIGIIA 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + + + + +++ S VE I + + ++ E
Sbjct: 117 TEGTVKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHED 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246
D ++L CTHYP++ + + + V +D+ LL + + +
Sbjct: 177 ----IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTP 232
Query: 247 DHALFLSGKPDI 258
H + +G P +
Sbjct: 233 THEYYTTGAPSM 244
>gi|191637675|ref|YP_001986841.1| Glutamate racemase [Lactobacillus casei BL23]
gi|190711977|emb|CAQ65983.1| Glutamate racemase [Lactobacillus casei BL23]
gi|327381734|gb|AEA53210.1| Ribonuclease PH/Ham1 protein [Lactobacillus casei LC2W]
gi|327384898|gb|AEA56372.1| Ribonuclease PH/Ham1 protein [Lactobacillus casei BD-II]
Length = 484
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
K+ +L VIACNT A LIK L + +G + P + A TQ+G I I++
Sbjct: 63 KKHIKML-VIACNTATAAALPLIKANL-----DIPVIGVIKPGSRAALKATQTGHIGIIA 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + + + + +++ S VE I + + ++ E
Sbjct: 117 TEGTVKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHED 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246
D ++L CTHYP++ + + + V +D+ LL + + +
Sbjct: 177 ----IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTP 232
Query: 247 DHALFLSGKPDI 258
H + +G P +
Sbjct: 233 THEYYTTGAPSM 244
>gi|153003580|ref|YP_001377905.1| glutamate racemase [Anaeromyxobacter sp. Fw109-5]
gi|152027153|gb|ABS24921.1| glutamate racemase [Anaeromyxobacter sp. Fw109-5]
Length = 259
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 12/246 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P +Y+ D PYG + + + +L
Sbjct: 2 SRIGIFDSGVGGLTVQRAILEALPSVDTVYLGDTARVPYGTKSADTVTQ-YSLRNARLLA 60
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+++ L V+ACNTA + LR+ ++ LG V P + AA ++ G I ++ T T+
Sbjct: 61 RHEIDLLVVACNTASAVALPALRAEL-AVPVLGVVEPGARAAARASRGGRIGVIGTQGTV 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKR 191
+ + + + + + EE G D + + ++ R
Sbjct: 120 SSGAYQSALRAARPDAEVVARACPLFVPLAEE---GWTDPGDPVVRGAVARYLAPLREAR 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ + P V +D++++IA R R+ + R HA
Sbjct: 177 IDTLVLGCTHYPLLREAIARELPE-VVLVDSAEAIAAEVRA---RMGEERGR-EGSHAFL 231
Query: 252 LSGKPD 257
++ P+
Sbjct: 232 VTDAPE 237
>gi|52081340|ref|YP_080131.1| glutamate racemase [Bacillus licheniformis ATCC 14580]
gi|52004551|gb|AAU24493.1| glutamate racemase [Bacillus licheniformis ATCC 14580]
Length = 271
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 98/224 (43%), Gaps = 6/224 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ IY+ D PYG + + + + +
Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYLGDTKRCPYGPRDRKEVLSYTWEMTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L ++ + VIACNTA + +E+ S ++ +G V P + A T++ I ++ T
Sbjct: 61 LSRHHIKMLVIACNTATAIALEEI-SREVAIPVIGVVQPGARTAIKVTENQRIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + ++ + VE K ++ + +
Sbjct: 120 TIKSGAYEEALLSLNGDLTVENLACPMFVPFVESG----KFLDETADEIVRTSLHPLRDS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYP++ ++ V+ + + D AR +L
Sbjct: 176 SIDTLILGCTHYPILKEPIQRYMGERVNIISSGDETAREVSTIL 219
>gi|197693746|gb|ACH71542.1| glutamate racemase [Helicobacter pylori]
gi|197693748|gb|ACH71543.1| glutamate racemase [Helicobacter pylori]
gi|197693750|gb|ACH71544.1| glutamate racemase [Helicobacter pylori]
gi|197693752|gb|ACH71545.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ ++ +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKKAPIL-VLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y+S H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLSVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|227534493|ref|ZP_03964542.1| glutamate racemase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227187892|gb|EEI67959.1| glutamate racemase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 484
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
K+ +L VIACNT A LIK L + +G + P + A TQ+G I I++
Sbjct: 63 KKHIKML-VIACNTATAAALPLIKANL-----DIPVIGVIKPGSRAALKATQTGHIGIIA 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + + + + +++ S VE I + + ++ E
Sbjct: 117 TEGTVKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHED 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246
D ++L CTHYP++ + + + V +D+ LL + + +
Sbjct: 177 ----IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTP 232
Query: 247 DHALFLSGKPDI 258
H + +G P +
Sbjct: 233 THEYYTTGAPSM 244
>gi|283770211|ref|ZP_06343103.1| glutamate racemase [Staphylococcus aureus subsp. aureus H19]
gi|283460358|gb|EFC07448.1| glutamate racemase [Staphylococcus aureus subsp. aureus H19]
Length = 266
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 33/258 (12%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ I I + K
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYS--------DPTITSIVIHQTLK 170
Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPV-DWLDNSDSI-------ARRARCLLPRI 237
R +D ++L CTHYPL+ P+ D+ D ++ AR LL
Sbjct: 171 RWRNSESDTVILGCTHYPLLYK--------PIYDYFDGKKTVISSGLETAREVSALLTFS 222
Query: 238 NTHQTRV-FDDHALFLSG 254
N H + DH F +G
Sbjct: 223 NEHASYTEHPDHRFFATG 240
>gi|187931550|ref|YP_001891534.1| glutamate racemase [Francisella tularensis subsp. mediasiatica
FSC147]
gi|187712459|gb|ACD30756.1| glutamate racemase [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 265
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL +++ + ++P IY D PYG ++K
Sbjct: 2 LDNRP--------IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQK 53
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
++D+ + +IACNT + KD ++ ++ + + A +
Sbjct: 54 FAAQTAKFLIDQEVKAI-IIACNTISAIAKDIVQEIAKAIPVIDVITA--GVSLVDNLNT 110
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++TPAT+ + +H ++ + S +EE I E + KE
Sbjct: 111 VGVIATPATINSNAYALQMHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVE-LVAKEYLS 169
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
F K ++L CTHYP+I
Sbjct: 170 YF---HDKNIQALILGCTHYPII 189
>gi|301065854|ref|YP_003787877.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family [Lactobacillus casei str. Zhang]
gi|300438261|gb|ADK18027.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family [Lactobacillus casei str. Zhang]
Length = 484
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
K+ +L VIACNT A LIK L + +G + P + A TQ+G I I++
Sbjct: 63 KKHIKML-VIACNTATAAALPLIKANL-----DIPVIGVIKPGSRAALKATQTGHIGIIA 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + + + + +++ S VE I + + ++ E
Sbjct: 117 TEGTVKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHED 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFD 246
D ++L CTHYP++ + + + V +D+ LL + + +
Sbjct: 177 ----IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTP 232
Query: 247 DHALFLSGKPDI 258
H + +G P +
Sbjct: 233 THEYYTTGAPSM 244
>gi|283470360|emb|CAQ49571.1| glutamate racemase [Staphylococcus aureus subsp. aureus ST398]
Length = 266
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 9/246 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189
T++ I +H V+ VE+ ++ + I I
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQ----MRYNDPTITSIVIHQTLKRWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
+ D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 175 SKADTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDH 234
Query: 249 ALFLSG 254
F +G
Sbjct: 235 RFFATG 240
>gi|308182705|ref|YP_003926832.1| glutamate racemase [Helicobacter pylori PeCan4]
gi|308064890|gb|ADO06782.1| glutamate racemase [Helicobacter pylori PeCan4]
Length = 255
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 32/248 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQ-------LSPWP---------VDWLDNSDSIARRARCLL 234
+V++L CTH+PLI LS P V +L ++ + A C
Sbjct: 173 LPEVVILGCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVGYLQQKYTLKKNA-CAF 231
Query: 235 PRINTHQT 242
P++ H +
Sbjct: 232 PKVEFHAS 239
>gi|313812338|gb|EFS50052.1| glutamate racemase [Propionibacterium acnes HL025PA1]
Length = 284
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMAESG 229
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+ D FL+ + + RRLM+GF
Sbjct: 230 LLHSHPRDSSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|227873305|ref|ZP_03991570.1| possible glutamate racemase [Oribacterium sinus F0268]
gi|227840872|gb|EEJ51237.1| possible glutamate racemase [Oribacterium sinus F0268]
Length = 121
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+K++ +P FI+ D PYG + ++ + + + +
Sbjct: 5 KAIGIFDSGLGGLSVLRKLKQELPGEDFIFYGDQKHAPYGEKSEEEVRSLSLSAYRFLQE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
K +VIACNTA + LR FP +G PA+K A Q
Sbjct: 65 KGVKA-TVIACNTATSAAAPYLRELFPEDIIIGMEPAVKPAVEALQ 109
>gi|196037606|ref|ZP_03104917.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|218902060|ref|YP_002449894.1| glutamate racemase [Bacillus cereus AH820]
gi|196031848|gb|EDX70444.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|218535080|gb|ACK87478.1| glutamate racemase [Bacillus cereus AH820]
Length = 276
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|313888088|ref|ZP_07821762.1| glutamate racemase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845778|gb|EFR33165.1| glutamate racemase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 276
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 29/212 (13%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK---RLMFLFS 69
N I +DSG+GGL VL+ + +F++ D + PYG + +K +M F
Sbjct: 3 NNVIGFYDSGVGGLSVLKVALNKIKNKNFVFFGDTLRMPYGARTNEEIKNYTMEVMGFFE 62
Query: 70 DILDKYQPVLSVIACNTAFT--LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
D+ LS+IACNTA + L + R +P +G V P + A T++ ++++
Sbjct: 63 DL----DVDLSIIACNTATSHGLKESNERYKYP---IIGVVEPGSENALERTKTKRVALV 115
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV------EEYACGIKIKEDEIKKEI 180
+T + + ++ S + V L + EEY GI +KK +
Sbjct: 116 ATKSCVESGVYDKVLKSMDPSIELRSVYCPDLTLAIERGEFEEEYMDGI------VKKYL 169
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
+ E D ++L CTHYPL+ F+++
Sbjct: 170 DYF----EDYDFDTMILGCTHYPLVEDSFKRI 197
>gi|227894671|ref|ZP_04012476.1| glutamate racemase [Lactobacillus ultunensis DSM 16047]
gi|227863510|gb|EEJ70931.1| glutamate racemase [Lactobacillus ultunensis DSM 16047]
Length = 268
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 24/240 (10%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNW--ED--HALKKRLMFLFSDILDKYQPVLSVIA 83
V++K+ +P I++ D+ PYGN ED + +K + FL ++ + L +IA
Sbjct: 18 VVKKVIKKLPNESTIFIGDNAHMPYGNRTKEDIINLTRKSVKFLLNNDVK-----LVIIA 72
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIH 142
CNTA D + +G + + AAA T++ +++++T T+ IH
Sbjct: 73 CNTATAAAMDTIEKEIDPQ-VIGVIQSGALAAARTTKNKKVAVVATSVTIASHAYEKEIH 131
Query: 143 SYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ + +++ LA V E++A +++ ++ +GK D +VL C
Sbjct: 132 FRDPEIKVTELAAPKLAPLVEAQEDHATNLRV--------VKESLAPLQGKDFDTLVLGC 183
Query: 200 THYPLIVHVFRQLSPWP-VDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALFLSGKPD 257
THYPLI F + P V LD +D +A+ ++ R + R H + +G PD
Sbjct: 184 THYPLIKREFTEAVDDPKVTILDPADQVAQYTFNVMRRDGLFSEERHKAVHKYYTTGNPD 243
>gi|225575569|ref|ZP_03784179.1| hypothetical protein RUMHYD_03661 [Blautia hydrogenotrophica DSM
10507]
gi|225037202|gb|EEG47448.1| hypothetical protein RUMHYD_03661 [Blautia hydrogenotrophica DSM
10507]
Length = 273
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 11/228 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALK-KRLMFLFSDILDKY 75
+FDSGIGGL V +++ +P +Y D PYG+ +D L+ R + F L+
Sbjct: 11 VFDSGIGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKDTVLRYSRQIIRF---LETE 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA E++ ++ +G + A + AA T + + ++ T T+
Sbjct: 68 NVKAIVVACNTASAFALSEIQKEM-NLPIIGVIEAGARVAAETTMNKKVGVIGTEGTIHS 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ S + ++ + VEE + E EI + +EKE D
Sbjct: 127 GIHERWLKSLDQEITVYGKPCPLFVPLVEEGWLKDPVTE-EIAERYLRELLEKE---VDT 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
++L CTHYPL+ + +++ V ++ + A + LL + N T
Sbjct: 183 LILGCTHYPLLRSLIQKVVGPEVKLVNPAYETALELKKLLSQENLLST 230
>gi|228932265|ref|ZP_04095149.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228827390|gb|EEM73140.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 265
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 11/240 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNTAAAAALAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRTDV 194
+H + +H + LA+ VE ED + ++++ + + D
Sbjct: 119 YEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDIDT 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 173 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTG 232
>gi|229137668|ref|ZP_04266273.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
gi|228645783|gb|EEL02012.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
Length = 283
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V +++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 18 IGVLDSGVGGLTVAREIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 76
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 77 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 135
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 136 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTKEDI 189
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++ CTHYPL+ ++ V + +++ A +L + +H F
Sbjct: 190 DTLIPGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHQFFT 249
Query: 253 SG 254
+G
Sbjct: 250 TG 251
>gi|257438473|ref|ZP_05614228.1| glutamate racemase [Faecalibacterium prausnitzii A2-165]
gi|257199052|gb|EEU97336.1| glutamate racemase [Faecalibacterium prausnitzii A2-165]
Length = 274
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 111/272 (40%), Gaps = 41/272 (15%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I +FDSG+GGL ++++R +P + +Y D PYG+ +
Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRRRLPHENIVYFGDTGRVPYGSRSPETILQ 52
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-------MAFLGAVPAI 111
++ + FL S + + AC T + ST+P+ + +LG V A
Sbjct: 53 YARQDIAFLLSKDVK-----CIMAACGT--------VSSTYPAAEAEKLPVPYLGVVDAA 99
Query: 112 KQAAAY-TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH-----LVSSMILASRVEEY 165
+ AA+ T++ I ++ T AT+R L+ V I L ++ A V+
Sbjct: 100 AREAAFSTRNRRIGVIGTAATIRSRSYEALLRRLVPGVEITARPCPLFVPLVEAGYVDHS 159
Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
A K++ K I E D ++L CTHYPLI + + V +D + +
Sbjct: 160 A---PDKQEITKLVIAQYLTEIRDAGVDTLILGCTHYPLIKTMIGEFMGRNVVLVDPAKT 216
Query: 226 IARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
A +L ++S PD
Sbjct: 217 AAHHLERILSERGLKADHPAGQAHFYVSDAPD 248
>gi|229028645|ref|ZP_04184759.1| Glutamate racemase [Bacillus cereus AH1271]
gi|228732664|gb|EEL83532.1| Glutamate racemase [Bacillus cereus AH1271]
Length = 281
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 19/246 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 13 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 71
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 72 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQS 130
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 131 NMYEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTKEDI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----H 248
D ++L CTHYPL+ ++ V + +++ A L I H+ + DD H
Sbjct: 185 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIE----LSTILQHKGILSDDLNPKH 240
Query: 249 ALFLSG 254
F +G
Sbjct: 241 RFFTTG 246
>gi|289427817|ref|ZP_06429526.1| glutamate racemase [Propionibacterium acnes J165]
gi|295131197|ref|YP_003581860.1| glutamate racemase [Propionibacterium acnes SK137]
gi|289158999|gb|EFD07194.1| glutamate racemase [Propionibacterium acnes J165]
gi|291377076|gb|ADE00931.1| glutamate racemase [Propionibacterium acnes SK137]
gi|313773262|gb|EFS39228.1| glutamate racemase [Propionibacterium acnes HL074PA1]
gi|313793455|gb|EFS41506.1| glutamate racemase [Propionibacterium acnes HL110PA1]
gi|313801146|gb|EFS42409.1| glutamate racemase [Propionibacterium acnes HL110PA2]
gi|313808495|gb|EFS46960.1| glutamate racemase [Propionibacterium acnes HL087PA2]
gi|313812068|gb|EFS49782.1| glutamate racemase [Propionibacterium acnes HL083PA1]
gi|313819230|gb|EFS56944.1| glutamate racemase [Propionibacterium acnes HL046PA2]
gi|313821098|gb|EFS58812.1| glutamate racemase [Propionibacterium acnes HL036PA1]
gi|313823476|gb|EFS61190.1| glutamate racemase [Propionibacterium acnes HL036PA2]
gi|313827021|gb|EFS64735.1| glutamate racemase [Propionibacterium acnes HL063PA1]
gi|313829865|gb|EFS67579.1| glutamate racemase [Propionibacterium acnes HL007PA1]
gi|313834707|gb|EFS72421.1| glutamate racemase [Propionibacterium acnes HL056PA1]
gi|313837924|gb|EFS75638.1| glutamate racemase [Propionibacterium acnes HL086PA1]
gi|314925917|gb|EFS89748.1| glutamate racemase [Propionibacterium acnes HL036PA3]
gi|314960892|gb|EFT04993.1| glutamate racemase [Propionibacterium acnes HL002PA2]
gi|314963344|gb|EFT07444.1| glutamate racemase [Propionibacterium acnes HL082PA1]
gi|314974021|gb|EFT18117.1| glutamate racemase [Propionibacterium acnes HL053PA1]
gi|314975447|gb|EFT19542.1| glutamate racemase [Propionibacterium acnes HL045PA1]
gi|314979454|gb|EFT23548.1| glutamate racemase [Propionibacterium acnes HL072PA2]
gi|314988438|gb|EFT32529.1| glutamate racemase [Propionibacterium acnes HL005PA2]
gi|314988643|gb|EFT32734.1| glutamate racemase [Propionibacterium acnes HL005PA3]
gi|315083402|gb|EFT55378.1| glutamate racemase [Propionibacterium acnes HL027PA2]
gi|315086803|gb|EFT58779.1| glutamate racemase [Propionibacterium acnes HL002PA3]
gi|315089450|gb|EFT61426.1| glutamate racemase [Propionibacterium acnes HL072PA1]
gi|315097779|gb|EFT69755.1| glutamate racemase [Propionibacterium acnes HL038PA1]
gi|327325396|gb|EGE67201.1| glutamate racemase [Propionibacterium acnes HL096PA2]
gi|327328265|gb|EGE70029.1| glutamate racemase [Propionibacterium acnes HL096PA3]
gi|327443689|gb|EGE90343.1| glutamate racemase [Propionibacterium acnes HL043PA1]
gi|327449226|gb|EGE95880.1| glutamate racemase [Propionibacterium acnes HL043PA2]
gi|327450180|gb|EGE96834.1| glutamate racemase [Propionibacterium acnes HL013PA2]
gi|327451244|gb|EGE97898.1| glutamate racemase [Propionibacterium acnes HL092PA1]
gi|328756764|gb|EGF70380.1| glutamate racemase [Propionibacterium acnes HL020PA1]
gi|328761038|gb|EGF74590.1| glutamate racemase [Propionibacterium acnes HL099PA1]
Length = 284
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ + +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDRL 68
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ L +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 69 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESG 229
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+ D FL+ + + RRLM+GF
Sbjct: 230 LLHSHPRDSSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|254725743|ref|ZP_05187525.1| glutamate racemase [Bacillus anthracis str. A1055]
Length = 276
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTFLQHKGILADNLNPKHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|332676074|gb|AEE72890.1| glutamate racemase [Propionibacterium acnes 266]
Length = 297
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ + +
Sbjct: 22 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDRL 81
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ L +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 82 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 140
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 141 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 194
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 195 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESG 242
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+ D FL+ + + RRLM+GF
Sbjct: 243 LLHSHPRDSSRYFLTTGNAERFEKLGRRLMEGF 275
>gi|111114922|ref|YP_709540.1| glutamate racemase [Borrelia afzelii PKo]
gi|110890196|gb|ABH01364.1| glutamate racemase [Borrelia afzelii PKo]
Length = 261
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++ L
Sbjct: 2 KNFKEVIIVFDSGIGGLSYFKYIKSKVGGGYQYVYVADNKNFPYGEKSSEYLLEAVLVLI 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y ++ACNT + ++L FP + L V +I A + +++T
Sbjct: 62 EKLKKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSSISDLAL----KRVLLIAT 117
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDEIKKEIEGC 183
TL + + Q ++H +I+ + E EY G K K+D ++ +E
Sbjct: 118 NTTLESKFVKD-------QVNMH--EDLIVKAAGELVNFVEY--GKKYKKDALRC-LEAL 165
Query: 184 FIEKEGKRTDVIVLACTHY 202
E +++ L CTHY
Sbjct: 166 KSEVVNTGREIVFLGCTHY 184
>gi|217958454|ref|YP_002337002.1| glutamate racemase [Bacillus cereus AH187]
gi|217063367|gb|ACJ77617.1| glutamate racemase [Bacillus cereus AH187]
Length = 275
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V +++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVAREIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++ CTHYPL+ ++ V + +++ A +L + +H F
Sbjct: 182 DTLIPGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHQFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|317181866|dbj|BAJ59650.1| glutamate racemase [Helicobacter pylori F57]
Length = 255
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +++ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIRQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMKHFTLSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|283458299|ref|YP_003362918.1| glutamate racemase [Rothia mucilaginosa DY-18]
gi|283134333|dbj|BAI65098.1| glutamate racemase [Rothia mucilaginosa DY-18]
Length = 350
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 12/227 (5%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 22 PVGPTAAAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 81
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGL 122
+ +++D +L VIACNTA + + R + + + PA ++A A T++
Sbjct: 82 IMDELVDSGVKML-VIACNTASAAVLRDARERYTRQYGIPVIEVIQPAARRALAATRNRK 140
Query: 123 ISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT+ R Y + +H V+ VE+ GI + ++ E
Sbjct: 141 IGVIATEATVTSRAYEDTF--AITPNLEVHSVACPRFVEFVEK---GITSGPELLETARE 195
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
K+ D +VL CTHYPL+ V + V + ++D A+
Sbjct: 196 YLQPLKDAG-VDTLVLGCTHYPLLAGVISYIMGEDVTLVSSADETAK 241
>gi|255326294|ref|ZP_05367380.1| glutamate racemase [Rothia mucilaginosa ATCC 25296]
gi|255296748|gb|EET76079.1| glutamate racemase [Rothia mucilaginosa ATCC 25296]
Length = 350
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 12/227 (5%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 22 PVGPTAAAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 81
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGL 122
+ +++D +L VIACNTA + + R + + + PA ++A A T++
Sbjct: 82 IMDELVDSGVKML-VIACNTASAAVLRDARERYTRQYGIPVIEVIQPAARRALAATRNRK 140
Query: 123 ISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT+ R Y + +H V+ VE+ GI + ++ E
Sbjct: 141 IGVIATEATVTSRAYEDTF--AITPNLEVHSVACPRFVEFVEK---GITSGPELLETARE 195
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
K+ D +VL CTHYPL+ V + V + ++D A+
Sbjct: 196 YLQPLKDAG-VDTLVLGCTHYPLLAGVISYIMGEDVTLVSSADETAK 241
>gi|197693666|gb|ACH71502.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVA-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI H
Sbjct: 173 LPEVIILGCTHFPLIAH 189
>gi|153820612|ref|ZP_01973279.1| glutamate racemase [Vibrio cholerae NCTC 8457]
gi|126508845|gb|EAZ71439.1| glutamate racemase [Vibrio cholerae NCTC 8457]
Length = 176
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
A+ S I +++TPAT++R YT LI + + ++ L+ S L + EE G + +
Sbjct: 17 ASLIASKAIGLIATPATVKRQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLE 76
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
E+ ++ DV VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 77 EL-----ASILQPLKNTIDVAVLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 131
>gi|161527572|ref|YP_001581398.1| glutamate racemase [Nitrosopumilus maritimus SCM1]
gi|160338873|gb|ABX11960.1| Glutamate racemase [Nitrosopumilus maritimus SCM1]
Length = 251
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 20/242 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+G L ++++M+ + IY AD +PYG L +R+M ++L+K+
Sbjct: 4 IAVFDSGLGSLSIIKEMQKAF-KSEIIYFADQQSYPYGKKSQAQL-ERIMRKSINLLEKF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P V+A NT +L+ D + P +K+A T+S I IL+T + +
Sbjct: 62 SPDFIVVASNTP-SLMLD-----LGTNRIFVVKPPLKEAKKITKSKQIGILATESATKSK 115
Query: 136 YTSNLIHSYVSQC-HIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
S I + + I ++ L VE ++ K E IKK++E I E +
Sbjct: 116 GLSKYIQENIPKSFKIFKINGTKLVDLVESGKFLTEKKYCEKIIKKKLE---ILNEN-QI 171
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D + L+ TH P + + P + ++D + +A++ + +I Q++ + +F
Sbjct: 172 DAVTLSSTHLPFLKKYLEKEFPN-IQFVDPGNIVAQK---IYFKIKNKQSKK-NSLKIFT 226
Query: 253 SG 254
SG
Sbjct: 227 SG 228
>gi|229101609|ref|ZP_04232332.1| Glutamate racemase [Bacillus cereus Rock3-28]
gi|228681851|gb|EEL36005.1| Glutamate racemase [Bacillus cereus Rock3-28]
Length = 264
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 11/240 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVECLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRTDV 194
+H + +H + LA+ VE ED + ++++ + + D
Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENQL------EDTAYVTQQVKQALLPLTKEDIDT 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 173 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 232
>gi|308061881|gb|ADO03769.1| glutamate racemase [Helicobacter pylori Cuz20]
Length = 255
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ +IKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILSIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CTFPKVEFHAS 239
>gi|227486394|ref|ZP_03916710.1| possible glutamate racemase [Anaerococcus lactolyticus ATCC 51172]
gi|227235575|gb|EEI85590.1| possible glutamate racemase [Anaerococcus lactolyticus ATCC 51172]
Length = 249
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI--- 71
+I IFDSG+GG+ VL ++ + ++ Y+ D++ PYGN K + +DI
Sbjct: 3 NIGIFDSGLGGIAVLNELA-KKNKANYFYLGDNLRVPYGNRS----KAEITSFATDIVNF 57
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ Y +IACNT KD LR F A AI+ A Y L L T AT
Sbjct: 58 LEGYDIDYYIIACNTISVTCKDYLREKFKKKFITIADMAIEAAMEYDGDYL--ALGTKAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + C ++ ++ L + +E G ++ + ++ K+
Sbjct: 116 MESHFYKTTLEA-KKPCKVYESKAIDLVNLIE----GGVLEGATLNGALDEYLSIANEKK 170
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
I+LACTHYP+I + + + +D
Sbjct: 171 LANIILACTHYPIIKGEISKRLDYKANIID 200
>gi|42780015|ref|NP_977262.1| glutamate racemase [Bacillus cereus ATCC 10987]
gi|42735933|gb|AAS39870.1| glutamate racemase [Bacillus cereus ATCC 10987]
Length = 275
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQKAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGENVTIISSAEETAIELSTILQHKGILSDNLNPVHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|15594446|ref|NP_212234.1| glutamate racemase (murI) [Borrelia burgdorferi B31]
gi|11386901|sp|O51127|MURI_BORBU RecName: Full=Glutamate racemase
gi|2687975|gb|AAC66479.1| glutamate racemase (murI) [Borrelia burgdorferi B31]
Length = 261
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 2 KNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLIE 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 62 KLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIATN 117
Query: 130 ATLRRTYTS---NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
TL + N+ + + + LV+ + ++YA + +E E
Sbjct: 118 TTLESKFVKDQVNIHNDLIVKAAGELVNFVEYGENYKKYAL----------RCLEALKFE 167
Query: 187 KEGKRTDVIVLACTHY 202
+++ L CTHY
Sbjct: 168 VVNTGREIVFLGCTHY 183
>gi|197693660|gb|ACH71499.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE G ++ E ++ I
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKILP 174
Query: 188 EGKRTDVIVLACTHYPLIVH 207
E VI+L CTH+PLI
Sbjct: 175 E-----VIILGCTHFPLIAQ 189
>gi|312147962|gb|ADQ30621.1| glutamate racemase [Borrelia burgdorferi JD1]
Length = 261
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 2 KNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLIE 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 62 KLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIATN 117
Query: 130 ATLRRTYTS---NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
TL + N+ + + + LV+ + ++YA + +E E
Sbjct: 118 TTLESKFVKDQVNIHNDLIVKAAGELVNFVEYGENYKKYAL----------RCLEALKFE 167
Query: 187 KEGKRTDVIVLACTHY 202
+++ L CTHY
Sbjct: 168 VVNTGREIVFLGCTHY 183
>gi|33861174|ref|NP_892735.1| putative aspartate and glutamate racemase:glutamate racemase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33639906|emb|CAE19076.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 264
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 23/246 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL--- 72
I IFDSGIGG +L + + Y+AD PYGN ++ F+ DI
Sbjct: 5 IGIFDSGIGGFTILSALMKTREDIEVFYLADTKRVPYGNKNIEQIR----FIAKDICNWF 60
Query: 73 -DKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
DK VL +IACNT D L + P + +V I I +L+TP
Sbjct: 61 KDKNLDVL-LIACNTTNACALDILENNLQIPCFDLINSVSEI------VTKKYIGVLATP 113
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ +Y +I S + + +E+ + + + ++ + KE
Sbjct: 114 ATIKTSYYKKIIESKRENVQVFQQACPEFVPEIEK--TNLDLNKLNYLSDLYINPLLKEN 171
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR--RARCLLPRINTHQTRVFDD 247
+ I+L C+HYPLI +V + + +D S ++ L+P+ ++++ D+
Sbjct: 172 --IEEIILGCSHYPLIYNVLKSKVHSNIRIIDPSAALVNNFNNSFLIPKNYSYESTSSDN 229
Query: 248 HALFLS 253
F++
Sbjct: 230 IKFFVT 235
>gi|84494378|ref|ZP_00993497.1| glutamate racemase [Janibacter sp. HTCC2649]
gi|84383871|gb|EAP99751.1| glutamate racemase [Janibacter sp. HTCC2649]
Length = 274
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 12/219 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG GGL V + + +P Y+ D PYG + + ++
Sbjct: 3 DSPIGIFDSGYGGLTVARAVLDQLPHESVAYLGDTARTPYGPRPIAETRAFALECLDRLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA + + R + PA+++A T++G I ++ST T
Sbjct: 63 NHGVKAL-VIACNTASAAVLHDARERYDVPVVEVIRPAVRRAVGATRTGRIGVISTLGTH 121
Query: 133 R-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEG 189
+ R Y + ++ + H+ V+S V+ G+ E+ + +E E++
Sbjct: 122 QSRAY----LDAFAAAPHL-TVTSEPCPRFVDFVESGVTGGEELRTVAREYLAPLQEQD- 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYPL+ V + V + +++ A+
Sbjct: 176 --VDTLILGCTHYPLLAGVISYVMGPDVTLVSSAEETAK 212
>gi|126695981|ref|YP_001090867.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9301]
gi|126543024|gb|ABO17266.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9301]
Length = 264
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 19/246 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSGIGG +L + + + Y+AD P+GN + ++ + + +DK
Sbjct: 7 IFDSGIGGFTILNSLLKIRKDVEVFYLADTKRIPFGNKDSKEIRLIAKEICTFFVDKNLD 66
Query: 78 VLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L ++ACNT A +++D L+ P + +V + + +I +L+T T+R
Sbjct: 67 AL-LVACNTTNACALDILEDNLK--IPCFDLINSV------SELVEKQIIGVLATSTTVR 117
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+Y I++ I S +E+ K+ D++ + K +
Sbjct: 118 SSYYEKAINTKKENTIILQQECPKFVSEIEKE----KLNLDKLNSLSDLYLRPLINKNIE 173
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR--ARCLLPRINTHQTRVFDDHALF 251
++L C+HYPLI + R+ + +D S + ++ +P ++ F++ F
Sbjct: 174 ELILGCSHYPLIYDILRKKLGPNIKIIDPSIGLIKKFNESFAIPETERCESISFENVKFF 233
Query: 252 LSGKPD 257
++ + D
Sbjct: 234 VTSERD 239
>gi|197693710|gb|ACH71524.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE G ++ E ++ I E
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKILPE-- 175
Query: 191 RTDVIVLACTHYPLIVH 207
VI+L CTH+PLI
Sbjct: 176 ---VIILGCTHFPLIAQ 189
>gi|295100376|emb|CBK97921.1| glutamate racemase [Faecalibacterium prausnitzii L2-6]
Length = 274
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I +FDSG+GGL ++++R +P + +Y D PYG+ +
Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPNENIVYFGDTGRVPYGSRSPETILQ 52
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY- 117
++ + FL S + + AC T ++ + P + +LG V A + AA+
Sbjct: 53 YARQDIAFLLSKDVK-----CIMAACGTVSSIYPAAEAAKLP-VPYLGVVDAAAREAAFV 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH-----LVSSMILASRVEEYACGIKIK 172
T++ I ++ T AT+R ++ V I L ++ A V+ A K
Sbjct: 107 TRNRRIGVIGTAATIRSRSYETVLRKLVPGVEITAQPCPLFVPLVEAGYVDHSALD---K 163
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
+ + I E D ++L CTHYPLI
Sbjct: 164 QQVTRLVIAQYLAEVREAGVDTLILGCTHYPLI 196
>gi|197693872|gb|ACH71605.1| glutamate racemase [Helicobacter pylori]
gi|197693874|gb|ACH71606.1| glutamate racemase [Helicobacter pylori]
gi|197693876|gb|ACH71607.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI H
Sbjct: 173 LPEVIILGCTHFPLIAH 189
>gi|49483313|ref|YP_040537.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA252]
gi|257425201|ref|ZP_05601627.1| glutamate racemase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427864|ref|ZP_05604262.1| glutamate racemase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430499|ref|ZP_05606881.1| glutamate racemase [Staphylococcus aureus subsp. aureus 68-397]
gi|257433261|ref|ZP_05609619.1| glutamate racemase [Staphylococcus aureus subsp. aureus E1410]
gi|257436100|ref|ZP_05612147.1| glutamate racemase [Staphylococcus aureus subsp. aureus M876]
gi|258423807|ref|ZP_05686693.1| glutamate racemase [Staphylococcus aureus A9635]
gi|282903699|ref|ZP_06311587.1| glutamate racemase [Staphylococcus aureus subsp. aureus C160]
gi|282905467|ref|ZP_06313322.1| glutamate racemase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908441|ref|ZP_06316272.1| glutamate racemase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910725|ref|ZP_06318528.1| glutamate racemase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282913925|ref|ZP_06321712.1| glutamate racemase [Staphylococcus aureus subsp. aureus M899]
gi|282918848|ref|ZP_06326583.1| glutamate racemase [Staphylococcus aureus subsp. aureus C427]
gi|282923970|ref|ZP_06331646.1| glutamate racemase [Staphylococcus aureus subsp. aureus C101]
gi|283957893|ref|ZP_06375344.1| glutamate racemase [Staphylococcus aureus subsp. aureus A017934/97]
gi|293500960|ref|ZP_06666811.1| glutamate racemase [Staphylococcus aureus subsp. aureus 58-424]
gi|293509917|ref|ZP_06668626.1| glutamate racemase [Staphylococcus aureus subsp. aureus M809]
gi|293526504|ref|ZP_06671189.1| glutamate racemase [Staphylococcus aureus subsp. aureus M1015]
gi|295427637|ref|ZP_06820269.1| glutamate racemase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591408|ref|ZP_06950046.1| glutamate racemase [Staphylococcus aureus subsp. aureus MN8]
gi|56749237|sp|Q6GHT5|MURI_STAAR RecName: Full=Glutamate racemase
gi|49241442|emb|CAG40126.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272177|gb|EEV04309.1| glutamate racemase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257274705|gb|EEV06192.1| glutamate racemase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278627|gb|EEV09246.1| glutamate racemase [Staphylococcus aureus subsp. aureus 68-397]
gi|257281354|gb|EEV11491.1| glutamate racemase [Staphylococcus aureus subsp. aureus E1410]
gi|257284382|gb|EEV14502.1| glutamate racemase [Staphylococcus aureus subsp. aureus M876]
gi|257846039|gb|EEV70067.1| glutamate racemase [Staphylococcus aureus A9635]
gi|282313942|gb|EFB44334.1| glutamate racemase [Staphylococcus aureus subsp. aureus C101]
gi|282316658|gb|EFB47032.1| glutamate racemase [Staphylococcus aureus subsp. aureus C427]
gi|282321993|gb|EFB52317.1| glutamate racemase [Staphylococcus aureus subsp. aureus M899]
gi|282325330|gb|EFB55639.1| glutamate racemase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282328106|gb|EFB58388.1| glutamate racemase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330759|gb|EFB60273.1| glutamate racemase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595317|gb|EFC00281.1| glutamate racemase [Staphylococcus aureus subsp. aureus C160]
gi|283790042|gb|EFC28859.1| glutamate racemase [Staphylococcus aureus subsp. aureus A017934/97]
gi|290920576|gb|EFD97639.1| glutamate racemase [Staphylococcus aureus subsp. aureus M1015]
gi|291095965|gb|EFE26226.1| glutamate racemase [Staphylococcus aureus subsp. aureus 58-424]
gi|291467367|gb|EFF09884.1| glutamate racemase [Staphylococcus aureus subsp. aureus M809]
gi|295127995|gb|EFG57629.1| glutamate racemase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297576294|gb|EFH95010.1| glutamate racemase [Staphylococcus aureus subsp. aureus MN8]
gi|312438474|gb|ADQ77545.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH60]
gi|315193821|gb|EFU24216.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 266
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 17/250 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ I I + K
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYS--------DPTITSIVIHQTLK 170
Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV- 244
R +D ++L CTHYPL+ + + AR LL N H +
Sbjct: 171 RWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTE 230
Query: 245 FDDHALFLSG 254
DH F +G
Sbjct: 231 HPDHRFFATG 240
>gi|228944589|ref|ZP_04106959.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229120481|ref|ZP_04249728.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|228663066|gb|EEL18659.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|228815049|gb|EEM61300.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 265
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 11/240 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRTDV 194
+H + +H + LA+ VE ED + ++++ + + D
Sbjct: 119 YEKALHELDTYLKVHSHACPTLATVVENRL------EDTAYVTQQVKQALLPLTKEDIDT 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 173 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTG 232
>gi|256372517|ref|YP_003110341.1| glutamate racemase [Acidimicrobium ferrooxidans DSM 10331]
gi|256009101|gb|ACU54668.1| glutamate racemase [Acidimicrobium ferrooxidans DSM 10331]
Length = 276
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ I +FDSG GGL +L +R L+P +Y D PYG+ + + + +
Sbjct: 4 ERAHGPIGVFDSGFGGLNILAALRDLLPSEDLVYFGDSARSPYGSRPADEVVRFSLEIGR 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILST 128
++D+ L V+ CNTA + D LR+ ++ +G V A +AA SG + ++ T
Sbjct: 64 WLVDEAGSKLVVVGCNTASAVALDALRAEL-AVPVIGVVGAGARAARRCVGSGRVGVIGT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
RT S ++ V+ L VE + ++ I
Sbjct: 123 ----ERTIASGAYQRALADDAGVAVACPGLVEFVEAG----QTTGPAVRAVIADRLAPVV 174
Query: 189 GKRTDVIVLACTHYPLIVH 207
+V++L CTHYP +
Sbjct: 175 DAGVEVLLLGCTHYPYLAR 193
>gi|222151562|ref|YP_002560718.1| hypothetical protein MCCL_1315 [Macrococcus caseolyticus JCSC5402]
gi|222120687|dbj|BAH18022.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 247
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 15/228 (6%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P Y+ D+ PYG +++ + L +++K+ +L VIACNTA + L
Sbjct: 4 LPNETIYYLGDEARCPYGPRTQEEVRRFTIQLAEFLINKHIKML-VIACNTATAAALESL 62
Query: 96 RSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
R TF ++ +G + P + A T++ + +L T T+R H+Y + H+
Sbjct: 63 RETF-NIPIIGVIEPGARTAIMTTENNHVLVLGTEGTIRS-------HAYKEKIHMINPH 114
Query: 155 SMILASRVEEYACGIKIK----EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ E+ ++ + E E + I E + ++D ++L CTHYPL+
Sbjct: 115 IEVAGKSCPEFVPLVESRRYKDEAESMRIISRVLQEFKTHKSDTVILGCTHYPLLQEYIN 174
Query: 211 QLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFLSGKPD 257
+ + + AR LL N H T+ H F++G +
Sbjct: 175 RFFDNQKKVISSGLETAREVSALLTFRNIHVTQPATVAHRFFVNGDAE 222
>gi|261839621|gb|ACX99386.1| glutamate racemase [Helicobacter pylori 52]
Length = 255
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQDYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEHFTLSTPPLLIHSGDAIVEYLHQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|216264433|ref|ZP_03436425.1| glutamate racemase [Borrelia burgdorferi 156a]
gi|223889211|ref|ZP_03623800.1| glutamate racemase [Borrelia burgdorferi 64b]
gi|225549776|ref|ZP_03770741.1| glutamate racemase [Borrelia burgdorferi 118a]
gi|215980906|gb|EEC21713.1| glutamate racemase [Borrelia burgdorferi 156a]
gi|223885460|gb|EEF56561.1| glutamate racemase [Borrelia burgdorferi 64b]
gi|225369736|gb|EEG99184.1| glutamate racemase [Borrelia burgdorferi 118a]
Length = 305
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y + + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMENFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTS---NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+++T TL + N+ + + + LV+ + ++YA + +
Sbjct: 156 LLIATNTTLESKFVKDQVNIHNDLIVKAAGELVNFVEYGENYKKYAL----------RCL 205
Query: 181 EGCFIEKEGKRTDVIVLACTHY 202
E E +++ L CTHY
Sbjct: 206 EALKFEVVNTGREIVFLGCTHY 227
>gi|197693698|gb|ACH71518.1| glutamate racemase [Helicobacter pylori]
gi|197693700|gb|ACH71519.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L V+ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 173 LPEVVILGCTHFPLIAH 189
>gi|297583708|ref|YP_003699488.1| glutamate racemase [Bacillus selenitireducens MLS10]
gi|297142165|gb|ADH98922.1| glutamate racemase [Bacillus selenitireducens MLS10]
Length = 280
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 13/227 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q I + DSG+GGL V+ ++ +P+ IY+ D PYG + + + +
Sbjct: 1 MQRPIGVIDSGVGGLTVVSELMRQLPKEEIIYIGDTKRCPYGPRPAFEVAEYTWEMIDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFL--GAVPAIKQAAAYTQSGLISILS 127
+ + +L VIACNTA ++ D+ R P + + GAV A+K T++ + ++
Sbjct: 61 MSRDIKLL-VIACNTASAVVLDDARQALDIPVIGVIHPGAVAALKA----TENLEVGVIG 115
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + S + + ++ L VE + +E K I
Sbjct: 116 TEGTISSGAYYEELKSIHNDVKVVSLACPTLVPLVESN----RYTGEEAKAVIREALEPM 171
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYP+I + + + + + D AR LL
Sbjct: 172 LDYPVDSLILGCTHYPMIEREIQDVVGEDIHVICSGDETARAVSTLL 218
>gi|268318989|ref|YP_003292645.1| hypothetical protein FI9785_498 [Lactobacillus johnsonii FI9785]
gi|262397364|emb|CAX66378.1| murI [Lactobacillus johnsonii FI9785]
Length = 266
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ +
Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117
+ + FL S + + + CNTA ++ P + +G + + AAA
Sbjct: 53 LTRDSVNFLLSKDVK-----IIIFGCNTATAAAMSTIQKEIP-LQIIGVIQSGALAAART 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE 175
T++ ++++ T AT+ HSY+ + I I +V E+A + E++
Sbjct: 107 TETKNVAVIGTKATVDS-------HSYLKE--IQYRDPEI---KVSEFAQPKLAPLAEED 154
Query: 176 IKKEIEGCFIEK-----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
++I+ + + + D +VL CTHYPL+ + +D +D +A+
Sbjct: 155 PDEDIKNAVVSESLTPLKNADYDTLVLGCTHYPLLREEIVAVVGQDKKIVDPADQVAQYT 214
Query: 231 RCLLPR 236
+L R
Sbjct: 215 YNVLRR 220
>gi|223984567|ref|ZP_03634697.1| hypothetical protein HOLDEFILI_01992 [Holdemania filiformis DSM
12042]
gi|223963472|gb|EEF67854.1| hypothetical protein HOLDEFILI_01992 [Holdemania filiformis DSM
12042]
Length = 244
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL +L K+R P+ F+Y+AD PYG+ D L+ L + L+K
Sbjct: 2 IGVFDSGIGGLRLLDKLRQRWPQEDFVYLADQAHVPYGS-LDRDTLLDLLQLNLNWLEKQ 60
Query: 76 QPVLSVIACNTA-FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA T I R + + +Q A T+ I +L+TP T +
Sbjct: 61 GADRIVVACNTASATGIARRYRGQAQIVEIISKT--CEQIPASTEK--ILVLATPFTAQS 116
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
++ + Q + V LA + E+ C + E +K E+ + G D+
Sbjct: 117 HRYQQVLARQLPQAEVKEVGLSCLAFMI-EHLCPKQEIETYLKGELNA---YRNG--FDL 170
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
VLACTH+P F ++ P L +S+SIA A
Sbjct: 171 AVLACTHFPFARDQFAKVLGIP---LIDSESIALEA 203
>gi|167648830|ref|YP_001686493.1| glutamate racemase [Caulobacter sp. K31]
gi|189030358|sp|B0T549|MURI_CAUSK RecName: Full=Glutamate racemase
gi|167351260|gb|ABZ73995.1| Glutamate racemase [Caulobacter sp. K31]
Length = 283
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GGL V + + +P+ FIY+AD PYG + + D
Sbjct: 2 SIGVFDSGVGGLTVHRALVNRLPQADFIYLADQANAPYGGRPGEEIVALTRAGCERLFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-------------------PSMAFLGAVP----AI 111
L V+ACNTA + L+ T+ P++ +P A
Sbjct: 62 GA-SLVVLACNTASAIALRRLQQTWLPGYRKALGRPINVLGIIVPTIEAATGLPWEHEAE 120
Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ Q ++ + STP T I + LA +E A +++
Sbjct: 121 RRGEKVEQLDILGVFSTPGTAASRVYEIEIDKRRQDVAVFSEPCPNLARMIEAGAGAVEL 180
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
E+++ ++ + G+ D +L CTHY +I +FR P
Sbjct: 181 A-TEVERHVQ-QLKTRIGRYPDRAILGCTHYEIIADLFRAALP 221
>gi|197693686|gb|ACH71512.1| glutamate racemase [Helicobacter pylori]
gi|197693688|gb|ACH71513.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ + N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LEILPEVVILGCTHFPLIAH 189
>gi|227888697|ref|ZP_04006502.1| glutamate racemase [Lactobacillus johnsonii ATCC 33200]
gi|227850724|gb|EEJ60810.1| glutamate racemase [Lactobacillus johnsonii ATCC 33200]
Length = 266
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ +
Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117
+ + FL S + + + CNTA + ++ P + +G V + AAA
Sbjct: 53 LTRDSVNFLLSKDVK-----IIIFGCNTATAVAMSTIQKEIP-LQIIGVVQSGALAAART 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIK 170
T++ ++++ T AT+ HSY+ + + + LA EE
Sbjct: 107 TETKNVAVIGTKATVDS-------HSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----D 154
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
ED + + D +VL CTHYPL+ + +D +D +A+
Sbjct: 155 PDEDTKNAVVSESLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYT 214
Query: 231 RCLLPR 236
+L R
Sbjct: 215 YNVLRR 220
>gi|37811807|gb|AAR03882.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 32/248 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQIFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234
+V++L CTH+PLI LS P V++L ++ + A C
Sbjct: 173 LPEVVILGCTHFPLIARQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA-CAF 231
Query: 235 PRINTHQT 242
P++ H +
Sbjct: 232 PKVEFHAS 239
>gi|119715551|ref|YP_922516.1| glutamate racemase [Nocardioides sp. JS614]
gi|119536212|gb|ABL80829.1| glutamate racemase [Nocardioides sp. JS614]
Length = 282
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 6/194 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL V + + +P +YV D PYG +++ + ++++
Sbjct: 21 IGIFDSGFGGLTVARSVIDQLPHESIVYVGDTARQPYGPKPIGEVREYALECLDHLVERG 80
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACN+A + + R + PA ++A A +++G I ++ T AT
Sbjct: 81 VKAL-VIACNSASAAMLRDARERYDVPVVEVIYPATRRAVAASRTGRIGVICTRATAESM 139
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ ++ + H+ LV+ R ++ DE+ + D +
Sbjct: 140 AYDD---AFAAAPHVRLVTQP--CPRFVDFVEAGVTSGDELISVAHEYLDPLISEGVDTL 194
Query: 196 VLACTHYPLIVHVF 209
+L CTHYPL+ V
Sbjct: 195 ILGCTHYPLLTGVI 208
>gi|37811906|gb|AAR03971.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 30/247 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIA---------RRARCLLP 235
+VI+L CTH+PLI P P + + D+I ++ C P
Sbjct: 173 LPEVIILGCTHFPLIAQKIEGYFMEHFALPTPPLLIHSGDAIVGYLQQKYALKKNACAFP 232
Query: 236 RINTHQT 242
++ H +
Sbjct: 233 KVEFHAS 239
>gi|315079376|gb|EFT51374.1| glutamate racemase [Propionibacterium acnes HL053PA2]
Length = 284
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 112/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ + +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDRL 68
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ L +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 69 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESG 229
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
D FL+ + + RRLM+GF
Sbjct: 230 LLHPHPRDSSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|229822946|ref|ZP_04449016.1| hypothetical protein GCWU000282_00238 [Catonella morbi ATCC 51271]
gi|229787759|gb|EEP23873.1| hypothetical protein GCWU000282_00238 [Catonella morbi ATCC 51271]
Length = 286
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 7/189 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I DSG GGL V+++ +P IY+ D+ PYG +K + L +L K
Sbjct: 9 IGFIDSGYGGLTVVKQSLKQLPNESIIYLGDNARCPYGPRSMEEVKDYIWQLTRFLLKKG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+L VIACNT +E+R T + +G + P + A T++ I ++ T T+
Sbjct: 69 IKML-VIACNTGTAAALEEIRQTL-DIPVVGVIHPGSRAAIERTENNHIGVIGTQGTIAS 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
++ + V+ VE++ + ++++ + ++ G D
Sbjct: 127 NLYERVMKDKADYLQVTSVACPSFVQLVEDHQLNSPLAWQQVRESLSA--FDQTG--IDT 182
Query: 195 IVLACTHYP 203
+V+ CTHYP
Sbjct: 183 LVMGCTHYP 191
>gi|197693734|gb|ACH71536.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LEILPEVVILGCTHFPLIAH 189
>gi|297197689|ref|ZP_06915086.1| glutamate racemase [Streptomyces sviceus ATCC 29083]
gi|297146828|gb|EFH28366.1| glutamate racemase [Streptomyces sviceus ATCC 29083]
Length = 262
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 75/196 (38%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + D G P+G + R + L +
Sbjct: 3 IALLDSGIGLLAATAAVRRLRPDADLVLSLDPDGMPWGPRTPDDIIGRALTLAE-AAAAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
P +I CNTA LR+ P + +G VPAIK AA + G +I +TPAT
Sbjct: 62 GPEALIIGCNTATVHALTALRARLEPDLPVIGTVPAIKPAA--SAGGPFAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y L+ + V LA VE + +
Sbjct: 120 PYQRGLLAEFADGVPATEVPCHGLAEAVEHADEAAIDAAVAAAAAL-------TPEDVTT 172
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 173 VVLGCTHYELVAERIR 188
>gi|319892140|ref|YP_004149015.1| Glutamate racemase [Staphylococcus pseudintermedius HKU10-03]
gi|317161836|gb|ADV05379.1| Glutamate racemase [Staphylococcus pseudintermedius HKU10-03]
gi|323464749|gb|ADX76902.1| glutamate racemase [Staphylococcus pseudintermedius ED99]
Length = 265
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG + +KK ++
Sbjct: 1 MDRPIGVMDSGVGGLTVAKEIMRQLPNETIYYLGDVARCPYGPRDQEEVKK-FTIEMANY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + VIACNTA + + L+ + +G + P + A T++ + +L T
Sbjct: 60 LVQYDIKMLVIACNTATAVALEPLQEQL-KIPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189
T++ I ++ V+ VEE +K K+ I I
Sbjct: 119 TIKSEAYRTHIKKINPHVDVYGVACPGFVPLVEE----MKYKDPTITNIVIHQTLKSWRQ 174
Query: 190 KRTDVIVLACTHYPLI 205
D ++L CTHYPL+
Sbjct: 175 TEADTVILGCTHYPLL 190
>gi|86152334|ref|ZP_01070545.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 260.94]
gi|85840823|gb|EAQ58074.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 260.94]
Length = 247
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++
Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121
Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y L+ +I+ +++ + VEE GI + D ++ +E F K
Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218
D ++LACTH+PL+ R LS + D
Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196
>gi|319779418|ref|YP_004130331.1| Glutamate racemase [Taylorella equigenitalis MCE9]
gi|317109442|gb|ADU92188.1| Glutamate racemase [Taylorella equigenitalis MCE9]
Length = 267
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KKL I +FD+GIG + +R P+ IY AD FPY W+ K +
Sbjct: 5 KKLVKPIAVFDAGIGSYAWARAIREKFPKQDIIYFADRANFPYA-WKTKDELKACIKGAI 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI-----S 124
+ L L V+ N + E++ S+ +G++P I A +++G I
Sbjct: 64 ECLADMGACLVVVTSNAPSITVVSEIKEEC-SVPVMGSIPPIASGVATSKTGEIINLGVK 122
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
ILS+ R + S +HLV++ L + VE G I E E E F
Sbjct: 123 ILSSLPEFRF-----FVESISDDAKVHLVNAEDLVTTVE---SGQFITEHEKTVEQVKKF 174
Query: 185 IEKEGKR---TDVIVLACTHYPLIVHVFRQLSP 214
++ ++ DV L+ TH IV +F++ +P
Sbjct: 175 MDDVRQKYPNADVCTLSSTHLTWIVDIFQKAAP 207
>gi|127663934|gb|ABO28649.1| glutamate recemase [Helicobacter pylori]
Length = 255
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 30/247 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIA---------RRARCLLP 235
+VI+L CTH+PLI P P + + D+I R+ C P
Sbjct: 173 LPEVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQKYALRKNACTFP 232
Query: 236 RINTHQT 242
++ H +
Sbjct: 233 KVEFHAS 239
>gi|229114438|ref|ZP_04243856.1| Glutamate racemase [Bacillus cereus Rock1-3]
gi|228669117|gb|EEL24541.1| Glutamate racemase [Bacillus cereus Rock1-3]
Length = 275
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 102/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ E ED + ++++ + +
Sbjct: 128 NMYEKALHELDTYLEVHSHACPTLATVAENQL------EDTAYVTQQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFT 241
Query: 253 SG 254
+G
Sbjct: 242 TG 243
>gi|57238663|ref|YP_179794.1| glutamate racemase [Campylobacter jejuni RM1221]
gi|86152895|ref|ZP_01071100.1| glutamate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|57167467|gb|AAW36246.1| glutamate racemase [Campylobacter jejuni RM1221]
gi|85843780|gb|EAQ60990.1| glutamate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|315059102|gb|ADT73431.1| Glutamate racemase [Campylobacter jejuni subsp. jejuni S3]
Length = 247
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++
Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121
Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y L+ +I+ +++ + VEE GI + D ++ +E F K
Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218
D ++LACTH+PL+ R LS + D
Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196
>gi|147677122|ref|YP_001211337.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
gi|146273219|dbj|BAF58968.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
Length = 266
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 17/259 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSGIGGL V ++ +P IY D PYG+ L R D L+
Sbjct: 5 GAIGLFDSGIGGLTVAVEVYRQLPAESTIYFGDTAHVPYGSRNPGEL-YRFASRIVDFLE 63
Query: 74 KYQPVLSVIACNTAFTL---IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ ACNT+ +L I E R P + + P + A T + I +++T A
Sbjct: 64 GEGAKYIIFACNTSSSLSLPILQE-RKAVPMIGLI--KPGVAAALQKTVNRRIGVIATEA 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + ++ L VE G + +++ + F KE
Sbjct: 121 TVKSGAYERELKRQDENVQVFCQAASRLVPLVEAGETGTPAAAEAVREYL---FPLKEAG 177
Query: 191 RTDVIVLACTHYPLIVH-VFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP + + ++ P V +D + + A L R+ +H
Sbjct: 178 -IDTLILGCTHYPFLKPLIAGEMGPG-VQLVDPAAATVEEAGKELQRLGLAAGGPAVPEH 235
Query: 249 ALFLSGKPDI---AMRRLM 264
+SG P A RR +
Sbjct: 236 RFVVSGDPAAFQKAARRFL 254
>gi|197693658|gb|ACH71498.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE G ++ E ++ I
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKILP 174
Query: 188 EGKRTDVIVLACTHYPLIVH 207
E VI+L CTH+PLI
Sbjct: 175 E-----VIILGCTHFPLIAQ 189
>gi|157415872|ref|YP_001483128.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81116]
gi|157386836|gb|ABV53151.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81116]
gi|307748509|gb|ADN91779.1| Glutamate racemase [Campylobacter jejuni subsp. jejuni M1]
gi|315931379|gb|EFV10348.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 327]
Length = 247
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++
Sbjct: 62 QIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121
Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y L+ +I+ +++ + VEE GI + D ++ +E F K
Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218
D ++LACTH+PL+ R LS + D
Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196
>gi|329766264|ref|ZP_08257822.1| glutamate racemase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137323|gb|EGG41601.1| glutamate racemase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 253
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+G L V+++++ + + IY AD FPYG +KK + + I + +
Sbjct: 4 IAIFDSGLGSLSVIKQIQKQI-KCDIIYFADSKNFPYGKKSIKEIKKITLQTITTIQNLF 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L ++ NT L T S + +P + +A T+S I+IL+T + ++
Sbjct: 63 KPDLIIVGSNTL------SLTLTSHSKNIIIVLPPLSEAQKITKSKSIAILATESIVK-- 114
Query: 136 YTSNLIHSYVSQCHIHLVSSM-ILASRVEEYACGIKIKEDE------IKKEIEGCFIEKE 188
S L+ SY++ I+ + I AS + E K D+ IKK ++ I
Sbjct: 115 --SKLLDSYINLFQINNTKIIKINASPLVELVESGKFYSDQKYCKVIIKKTLDYKLIRNN 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
DV+ L+ TH P ++ +++ P V +LD S
Sbjct: 173 ---VDVVTLSSTHLPFLLKFLKEIFPH-VTFLDPS 203
>gi|300741330|ref|ZP_07071351.1| glutamate racemase [Rothia dentocariosa M567]
gi|300380515|gb|EFJ77077.1| glutamate racemase [Rothia dentocariosa M567]
Length = 346
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 11/233 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 23 PAGPTSSAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 82
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGL 122
+ +++D +L VIACNTA + + R + + + PA ++A A T++
Sbjct: 83 IMDELVDSGVKML-VIACNTASAAVLRDARERYTRHYGIPVIEVIQPAARRALAATRNRK 141
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++T AT+ TS + +V S+ VE G+ E+ + E
Sbjct: 142 IGVIATEATV----TSRAYEDTFAIAPNLMVQSVACPRFVEFVEKGV-TSGPELLRTAEE 196
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLL 234
+ D +VL CTHYPL+ + + V + ++D A+ R LL
Sbjct: 197 YLQPLKDSGVDTLVLGCTHYPLLTGIISYIMGEDVTLVSSADETAKDVYRALL 249
>gi|237751612|ref|ZP_04582092.1| glutamate racemase [Helicobacter bilis ATCC 43879]
gi|229372978|gb|EEO23369.1| glutamate racemase [Helicobacter bilis ATCC 43879]
Length = 258
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 18/224 (8%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N+I IFDSG GGL VL+ + + H +Y D PYGN +D +R +
Sbjct: 5 NNIGIFDSGAGGLTVLKSLIEEVGFNHIVYYGDTARVPYGN-KDTETIRRFSLEALEFFS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL-----ISILST 128
+ L V+ACNTA ++ + +G + + AA TQ + I +++T
Sbjct: 64 NFGLDLLVVACNTASAHALHAMQEC-SKIPIIGVIES--GIAALTQQHIAKDKHILVIAT 120
Query: 129 PATLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ Y +L + + +I +++ + S VEE+ ++ + ++
Sbjct: 121 EATIKSDNYAKSLRN--LGYTNITSLATNLFVSLVEEHVFSGEVVDSVLRHYFPPTL--- 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ DV++L CTH+PL++ ++ V ++ + ++IA R
Sbjct: 176 ---KPDVVILGCTHFPLLLLPMQKYFGSDVKFIHSGEAIACYVR 216
>gi|239618385|ref|YP_002941707.1| glutamate racemase [Kosmotoga olearia TBF 19.5.1]
gi|239507216|gb|ACR80703.1| glutamate racemase [Kosmotoga olearia TBF 19.5.1]
Length = 277
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 20/247 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPE-YHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSGIGG+ VL+++ +P F Y D PYG+ +KK + +F D
Sbjct: 7 IGIFDSGIGGITVLRELMKSVPTGVRFHYFGDTARVPYGSKPPSEIKKYVHQVF-DFFRS 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
V ACNT+ +++ E + + P + + V A+K S ++I+ T T
Sbjct: 66 LSVEAIVTACNTSDSILSKEEKKSLEVPFFSIIDPVTEALKNDLPINSS--VAIIGTRNT 123
Query: 132 LRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
++R+ Y LI S + C I + + VEE + E ++ + G K
Sbjct: 124 IKRSLYLKKLIGSD-NICRISQKACPLFVPLVEEGVWEGTLAETIVRYYLRGI------K 176
Query: 191 R--TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
R D ++L CTHYP ++ + V +D ++ +AR + I Q V
Sbjct: 177 RFAPDYLILGCTHYPFLLKPIKTYLGEDVKVVDPAEYVAREFKAW---IENQQNDVDSTV 233
Query: 249 ALFLSGK 255
+++G+
Sbjct: 234 VFYVTGE 240
>gi|229154555|ref|ZP_04282672.1| Glutamate racemase [Bacillus cereus ATCC 4342]
gi|228628953|gb|EEK85663.1| Glutamate racemase [Bacillus cereus ATCC 4342]
Length = 284
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ ++ + + L ++
Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVLEMV-EFLKQF 76
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 77 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKS 135
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRT 192
+H + +H + LA+ VE ED + ++++ + +
Sbjct: 136 NMYEKALHELDTYLKVHSHACPTLATVVENQL------EDTAYVTEQVKQALLPLTEEDI 189
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 190 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT 249
Query: 253 SG 254
+G
Sbjct: 250 TG 251
>gi|197693566|gb|ACH71452.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|121612969|ref|YP_001001295.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176]
gi|167006189|ref|ZP_02271947.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176]
gi|87249921|gb|EAQ72880.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176]
Length = 247
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 12/193 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Q + +IACNTA D LR+ FP + A A + ++ I +++T AT++
Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121
Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y L+ +I+ +++ + VEE GI + D ++ +E F K
Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLI 205
D ++LACTH+PL+
Sbjct: 174 DALILACTHFPLL 186
>gi|197693762|gb|ACH71550.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI H
Sbjct: 173 LPEVIILGCTHFPLIAH 189
>gi|197693584|gb|ACH71461.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + S +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVSLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693764|gb|ACH71551.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI H
Sbjct: 173 LPEVIILGCTHFPLIAH 189
>gi|197693594|gb|ACH71466.1| glutamate racemase [Helicobacter pylori]
gi|197693596|gb|ACH71467.1| glutamate racemase [Helicobacter pylori]
gi|197693822|gb|ACH71580.1| glutamate racemase [Helicobacter pylori]
gi|197693824|gb|ACH71581.1| glutamate racemase [Helicobacter pylori]
gi|197693826|gb|ACH71582.1| glutamate racemase [Helicobacter pylori]
gi|197693828|gb|ACH71583.1| glutamate racemase [Helicobacter pylori]
gi|197693830|gb|ACH71584.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI H
Sbjct: 173 LPEVIILGCTHFPLIAH 189
>gi|82750757|ref|YP_416498.1| glutamate racemase [Staphylococcus aureus RF122]
gi|123549008|sp|Q2YXC5|MURI_STAAB RecName: Full=Glutamate racemase
gi|82656288|emb|CAI80702.1| glutamate racemase [Staphylococcus aureus RF122]
Length = 266
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 103/246 (41%), Gaps = 9/246 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 MG-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EG 189
T++ I +H V+ VE+ ++ + I + +++
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQ----MRYSDPTITSIVIHQTLKRWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 175 SESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDH 234
Query: 249 ALFLSG 254
F +G
Sbjct: 235 RFFATG 240
>gi|282855013|ref|ZP_06264345.1| glutamate racemase [Propionibacterium acnes J139]
gi|282581601|gb|EFB86986.1| glutamate racemase [Propionibacterium acnes J139]
gi|314982112|gb|EFT26205.1| glutamate racemase [Propionibacterium acnes HL110PA3]
gi|315090351|gb|EFT62327.1| glutamate racemase [Propionibacterium acnes HL110PA4]
Length = 284
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTMADVRRYALQCLDR 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEA------ 181
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESG 229
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+ + FL+ + + RRLM+GF
Sbjct: 230 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|228926020|ref|ZP_04089101.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228833732|gb|EEM79288.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 265
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 11/240 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQS-FVFEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEKEGKRTDV 194
+H + +H + LA+ VE ED + ++++ + + D
Sbjct: 119 YEKALHELDTYLKVHSHACPNLATVVENRL------EDTAYVTQQVKQALLPLTKEDIDT 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 173 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTG 232
>gi|197693624|gb|ACH71481.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTPAT 131
Q L ++ACNTA L +E++ F + +G + AIKQ ++ I +L T AT
Sbjct: 62 QIELLIVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + +HL +S+ + +EE I E E+ + +
Sbjct: 120 IQSNAYDNALKQQGYLNVVHLATSLFV-PLIEE-----NILEGELLETCMRYYFTPLKIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPW 215
+V++L CTH+PLI RQ+ +
Sbjct: 174 PEVVILGCTHFPLIA---RQIEGY 194
>gi|197693804|gb|ACH71571.1| glutamate racemase [Helicobacter pylori]
gi|197693836|gb|ACH71587.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVA-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
VI+L CTH+PLI RQ+ +
Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194
>gi|116333824|ref|YP_795351.1| glutamate racemase [Lactobacillus brevis ATCC 367]
gi|122269489|sp|Q03R52|MURI_LACBA RecName: Full=Glutamate racemase
gi|116099171|gb|ABJ64320.1| Glutamate racemase [Lactobacillus brevis ATCC 367]
Length = 276
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 102/228 (44%), Gaps = 13/228 (5%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL--F 68
+QN I + DSG+GGL VL++++ L+P + +++ D PYG ++ + MF
Sbjct: 1 MQNDPIGLMDSGVGGLTVLKEVQRLLPTENTVFLGDQARLPYG---PRSVAEVTMFTKQI 57
Query: 69 SDILDKYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ L + + + VIACNTA ++ T P + +G + P + A T++ I ++
Sbjct: 58 AQFLRQQAGIKALVIACNTATAAALTTMQQTLP-IPVIGVIAPGAQAAVQTTRNHRIGVI 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T++ I + I V+ + + E+ + + +
Sbjct: 117 ATAGTVKSDQYRRDILAAAPNSQIFSVACPEMVTLAEQN----DLTTTHARSVVAANLAS 172
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
K+ D +V+ CTH+PL+ + V +D + A + +L
Sbjct: 173 LMDKKIDTLVMGCTHFPLLRSAIQHAVGSQVTLVDPGLATAEQTAAIL 220
>gi|259502881|ref|ZP_05745783.1| glutamate racemase [Lactobacillus antri DSM 16041]
gi|259169132|gb|EEW53627.1| glutamate racemase [Lactobacillus antri DSM 16041]
Length = 257
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 6/187 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+ +R +P+ ++V D FPYG + A ++L L ++
Sbjct: 1 MDSGLGGLSVLRVLRQELPDESLLFVGDQGHFPYGT-KTQAEVRQLALAIGRFLVRHDAK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
L V+ACNTA T + +G + AA T I ++ T +T++
Sbjct: 60 LMVVACNTA-TGAALPALQAALPIPVVGVIRPGATAALATNPRTIGVIGTDSTIKNGAYE 118
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+H + + L + VE G + + K ++ F + + ++L
Sbjct: 119 RTLHELQPAVKVVSQPAQPLVAIVEHGQTGTPAAQRAVDKVLQ-PFASQP---VENLILG 174
Query: 199 CTHYPLI 205
CTH+P +
Sbjct: 175 CTHFPFL 181
>gi|256824843|ref|YP_003148803.1| glutamate racemase [Kytococcus sedentarius DSM 20547]
gi|256688236|gb|ACV06038.1| glutamate racemase [Kytococcus sedentarius DSM 20547]
Length = 285
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 99/243 (40%), Gaps = 9/243 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+ D PYG +++ + ++D+
Sbjct: 6 IGIFDSGLGGLTVARAVIDHLPHESTVYLGDTHHAPYGPRPIAEVRRLALDSLDALMDRG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACN+A + + R + PA ++AA T++G + ++ST AT
Sbjct: 66 VKAL-VIACNSASAAVLHDARERYSVPVIEVIRPAARRAAGITRTGAVGVISTQAT---- 120
Query: 136 YTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+TS ++ + + L S R + I E+ + D
Sbjct: 121 HTSGAYRDAFAAVPSVQLRSQPC--PRFVHFVESGTISGPEVFAAATEYLQPLKEAGVDT 178
Query: 195 IVLACTHYPLIVHVFR-QLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYPL+ V ++ P ++ A R L R H +
Sbjct: 179 LILGCTHYPLLRGVIAYEMGPEVSLVSSAEETAAELLRTLADRGELAPDATVPTHEFLTT 238
Query: 254 GKP 256
G P
Sbjct: 239 GDP 241
>gi|42518578|ref|NP_964508.1| glutamate racemase [Lactobacillus johnsonii NCC 533]
gi|81668196|sp|Q74KU5|MURI_LACJO RecName: Full=Glutamate racemase
gi|41582863|gb|AAS08474.1| glutamate racemase [Lactobacillus johnsonii NCC 533]
Length = 266
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ +
Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117
+ + FL S + + + CNTA + ++ P + +G V + AAA
Sbjct: 53 LTRDSVNFLLSKDVK-----IIIFGCNTATAVAMATIQKEIP-LQIIGVVQSGALAAART 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIK 170
T++ ++++ T AT+ HSY+ + + + LA EE
Sbjct: 107 TETKNVAVIGTKATVAS-------HSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----D 154
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
ED + + D +VL CTHYPL+ + +D +D +A+
Sbjct: 155 PDEDTKNAVVSESLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYT 214
Query: 231 RCLLPR 236
+L R
Sbjct: 215 YNVLRR 220
>gi|1346607|sp|P48797|MURI_LACBR RecName: Full=Glutamate racemase
gi|468450|dbj|BAA06106.1| glutamate racemase [Lactobacillus brevis]
Length = 276
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 24/257 (9%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL--F 68
+QN I + DSG+GGL VL++++ L+P + +++ D PYG ++ + MF
Sbjct: 1 MQNDPIGLMDSGVGGLTVLKEVQRLLPTENTVFLGDQARLPYG---PRSVAEVTMFTKQI 57
Query: 69 SDILDKYQPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ L + + + VIACNTA ++ T P + +G + P + A T++ I ++
Sbjct: 58 AQFLRQQARIKALVIACNTATAAALTTMQQTLP-IPVIGVIAPGAQAAVQTTRNHRIGVI 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T++ I + I V+ + + E+ + + +
Sbjct: 117 ATAGTVKSDQYRRDILAAAPNSQIFSVACPEMVTLAEQN----DLTTTHAQSVVAANLAS 172
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR------RARCLLPRINTH 240
K+ D +V+ CTH+PL+ + V +D + A + R LL T
Sbjct: 173 LMDKKIDTLVMGCTHFPLLRSAIQHAVGSQVTLVDPGLATAEQTVAILKTRGLLNSATTR 232
Query: 241 QTRVFDDHALFLSGKPD 257
T F F +G+ D
Sbjct: 233 GTAQF-----FTTGETD 244
>gi|227498833|ref|ZP_03928973.1| glutamate racemase [Acidaminococcus sp. D21]
gi|226904285|gb|EEH90203.1| glutamate racemase [Acidaminococcus sp. D21]
Length = 274
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 6/190 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL VL+ ++ MP FI++ D PYG+ + +R + +D L +
Sbjct: 15 IGVIDSGVGGLTVLKWLQKKMPHEQFIFIGDTARTPYGDRAREEI-QRFVKEMTDCLARR 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNT L D +R+ + +G T + + +T T+
Sbjct: 74 KIKELVVACNTITVLGLDTIRNGY-DFDVIGMAKGASNIREVTHNNKVGFFATDFTVSTG 132
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I + + L +E G ++ IK+ ++ + D +
Sbjct: 133 AHKREIERLDPGVEVFGLGCPKLVPLIESEKFGRPEMQEAIKEYVDAMKVHG----IDTL 188
Query: 196 VLACTHYPLI 205
+L+CTHYP +
Sbjct: 189 LLSCTHYPFL 198
>gi|197693694|gb|ACH71516.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYGNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LEILPEVVILGCTHFPLIAH 189
>gi|314984207|gb|EFT28299.1| glutamate racemase [Propionibacterium acnes HL005PA1]
Length = 284
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 112/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ + +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDRL 68
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ L +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 69 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + + +S AR + L+
Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGAAPALISSSQQCARASYSLMAESG 229
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+ D FL+ + + RRLM+GF
Sbjct: 230 LLHSHPRDSSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|228938111|ref|ZP_04100731.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228970986|ref|ZP_04131623.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228977589|ref|ZP_04137981.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228782233|gb|EEM30419.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228788795|gb|EEM36737.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228821596|gb|EEM67601.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326938613|gb|AEA14509.1| glutamate racemase [Bacillus thuringiensis serovar chinensis CT-43]
Length = 276
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 7/240 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ +F + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQS-FVFEMVEFLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L+ S+ +G + P + A T+ I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+H + +H + LA+ VE I ++K+ + + D
Sbjct: 128 NMYEKALHELDTYLEVHSHACPTLATVVENRLEDIAYVTQQVKQ----ALLPLTKEDIDT 183
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 184 LILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTG 243
>gi|197693792|gb|ACH71565.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFAP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPW 215
VI+L CTH+PLI RQ+ +
Sbjct: 170 LKILPKVIILGCTHFPLIA---RQIEGY 194
>gi|197693668|gb|ACH71503.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LKILPEVVILGCTHFPLIAH 189
>gi|197693676|gb|ACH71507.1| glutamate racemase [Helicobacter pylori]
gi|197693678|gb|ACH71508.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LKILPEVVILGCTHFPLIAH 189
>gi|197693576|gb|ACH71457.1| glutamate racemase [Helicobacter pylori]
gi|197693766|gb|ACH71552.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTPAT 131
Q L V+ACNTA L +E++ F + +G + AIKQ ++ I +L T AT
Sbjct: 62 QIKLLVVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 120 IQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLE 171
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPW 215
+VI+L CTH+PLI RQ+ +
Sbjct: 172 ILPEVIILGCTHFPLIA---RQIEGY 194
>gi|315586766|gb|ADU41147.1| glutamate racemase [Helicobacter pylori 35A]
Length = 255
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L E++ S P + + ++ AI Q ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAINQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT+R N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIRSHAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI H LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|78212667|ref|YP_381446.1| glutamate racemase [Synechococcus sp. CC9605]
gi|123578331|sp|Q3AKJ1|MURI_SYNSC RecName: Full=Glutamate racemase
gi|78197126|gb|ABB34891.1| Glutamate racemase [Synechococcus sp. CC9605]
Length = 265
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 19/189 (10%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSG+GGL VL+++ +Y+ D PYGN + +++ + + D+
Sbjct: 9 FDSGLGGLTVLRRVLERHGSVPCVYLGDTARVPYGNRQPDDIRRIAAEVVGWLRDQKVST 68
Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ V+ACNT L +D + ++ P + +GA AAA ++ + +L+TPAT+
Sbjct: 69 V-VMACNTTNALARDVADGQAGAPVIGLIGA------AAAMVETRRVGVLATPATV---- 117
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKRTD 193
S+ + + H SM++ + I+ + D++++ + +
Sbjct: 118 ASSAYRASIEALH---PGSMVIEQACPAFVPLIESGDMNSDDLRRAAQAYLEPLLAASVE 174
Query: 194 VIVLACTHY 202
IVL CTHY
Sbjct: 175 SIVLGCTHY 183
>gi|197693558|gb|ACH71448.1| glutamate racemase [Helicobacter pylori]
gi|197693586|gb|ACH71462.1| glutamate racemase [Helicobacter pylori]
gi|197693614|gb|ACH71476.1| glutamate racemase [Helicobacter pylori]
gi|197693616|gb|ACH71477.1| glutamate racemase [Helicobacter pylori]
gi|197693620|gb|ACH71479.1| glutamate racemase [Helicobacter pylori]
gi|197693768|gb|ACH71553.1| glutamate racemase [Helicobacter pylori]
gi|197693770|gb|ACH71554.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTPAT 131
Q L V+ACNTA L +E++ F + +G + AIKQ ++ I +L T AT
Sbjct: 62 QIKLLVVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 120 IQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLK 171
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPW 215
+VI+L CTH+PLI RQ+ +
Sbjct: 172 ILPEVIILGCTHFPLIA---RQIEGY 194
>gi|197693702|gb|ACH71520.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LEILPEVVILGCTHFPLIAH 189
>gi|283957038|ref|ZP_06374510.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 1336]
gi|283791539|gb|EFC30336.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 1336]
Length = 247
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Q + +IACNTA D L++ FP + A A + ++ I +++T AT++
Sbjct: 62 QIDMLIIACNTASAYALDALKAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIK 121
Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y L+ + +I+ +++ + VEE GI + D ++ +E F K
Sbjct: 122 SEEYQKRLL--FQGYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218
D ++LACTH+PL+ R LS + D
Sbjct: 174 DALILACTHFPLLG---RSLSKYFGD 196
>gi|127663966|gb|ABO28671.1| glutamate recemase [Helicobacter pylori]
Length = 255
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 30/247 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIA---------RRARCLLP 235
+VI+L CTH+PLI P P + + D+I R C P
Sbjct: 173 LPEVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQKYSLRENACTFP 232
Query: 236 RINTHQT 242
++ H +
Sbjct: 233 KVEFHAS 239
>gi|197693684|gb|ACH71511.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LEILPEVVILGCTHFPLIAH 189
>gi|329666855|gb|AEB92803.1| glutamate racemase [Lactobacillus johnsonii DPC 6026]
Length = 266
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ +
Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117
+ + FL S + + + CNTA + ++ P + +G V + AAA
Sbjct: 53 LTRDSVNFLLSKDVK-----IIIFGCNTATAVAMATIQKEIP-LQIIGVVQSGALAAART 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIK 170
T++ ++++ T AT+ HSY+ + + + LA EE
Sbjct: 107 TETKNVAVIGTKATVAS-------HSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----D 154
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
ED + + D +VL CTHYPL+ + +D +D +A+
Sbjct: 155 PDEDTKSAVVSESLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYT 214
Query: 231 RCLLPR 236
+L R
Sbjct: 215 YNVLRR 220
>gi|197693622|gb|ACH71480.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|295691544|ref|YP_003595237.1| glutamate racemase [Caulobacter segnis ATCC 21756]
gi|295433447|gb|ADG12619.1| glutamate racemase [Caulobacter segnis ATCC 21756]
Length = 282
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 108/275 (39%), Gaps = 27/275 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P+ F Y+AD PYG + + D+
Sbjct: 2 IGVFDSGVGGLTVHRALVQRLPQADFTYLADQANAPYGVRTGEDIVALTKAGCEHLFDRG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PS--------MAFLG-AVPAIKQAAA--------- 116
V+ V+ACNTA + L+ T+ PS + LG VP I++A
Sbjct: 62 ASVV-VLACNTASAIALRRLQQTWLPSYRKELGRPVNILGIIVPTIEKATGLPWEHEAER 120
Query: 117 ----YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
Q ++ + +T AT+R I + + L +E A + +
Sbjct: 121 RGEKVEQLDILGVFATQATVRSRVYEIEIDKRKQDLAVFSEACPELVPLIEGDASAVDLA 180
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+ ++ +E + G+ D +VL CTHY +I +FR P + ++ A
Sbjct: 181 K-AVQGHVE-ALKTRIGRYPDRVVLGCTHYEIIADIFRAALPAGTPLIQQPEATADALEL 238
Query: 233 LLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
L R + +G P L+Q F
Sbjct: 239 YLERHPEYDPGQGGSRVFLTTGTPG-PQNGLVQSF 272
>gi|256396658|ref|YP_003118222.1| glutamate racemase [Catenulispora acidiphila DSM 44928]
gi|256362884|gb|ACU76381.1| glutamate racemase [Catenulispora acidiphila DSM 44928]
Length = 295
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 6/213 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL V++ + +P Y D PYG ++ + +++
Sbjct: 18 IGIFDSGFGGLTVVRALLDQLPHEAVSYFGDTARAPYGPRPIAQVRAYALECMDKLVESG 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+L VIACN+A + + R + PA++ A A T++ + ++ST +T R
Sbjct: 78 VKML-VIACNSASGAVLRDARERYEIPVVEVIRPAVRLAVAATRNQHVGVISTRSTRR-- 134
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + ++ + I L + R E+ + +E+ K D +
Sbjct: 135 -SMAYVDAFAAAPQIQLTTQEC--PRFVEFVEAGETAGEELLKVAREYLDPVAAAGVDTL 191
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+L CTHYPL+ V + V +++++ A+
Sbjct: 192 ILGCTHYPLLTGVISYVMGEDVILINSAEETAK 224
>gi|197693864|gb|ACH71601.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|116074593|ref|ZP_01471854.1| Glutamate racemase [Synechococcus sp. RS9916]
gi|116067815|gb|EAU73568.1| Glutamate racemase [Synechococcus sp. RS9916]
Length = 265
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 35/230 (15%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD--KY 75
+FDSG+GGL VL+ + +Y+ D PYG+ ++ + ++++ K+
Sbjct: 7 LFDSGVGGLTVLRSILQRHGPVPTVYLGDTARVPYGSRSPAEIRS----IAAEVVAWLKH 62
Query: 76 QPVLSVI-ACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q V +V+ ACNT L +D E ++ P + +GA AAA + + +L+TPAT+
Sbjct: 63 QHVSTVVMACNTTNALARDVAEGQAGVPVVGLIGA------AAAMVRETRVGVLATPATV 116
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCF 184
S + + ++ + V + AC + E+++E G
Sbjct: 117 ------------ASGAYRQSIEALNPGTLVVQQACPNFVPLIESGDLSSQELREEAMGYL 164
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ ++L CTHYPL+ + R L P V +D ++ +AR+ LL
Sbjct: 165 TPLLEASVEAVILGCTHYPLLEPLLRSLLPPDVRLIDPAEGVARQLDALL 214
>gi|284047416|ref|YP_003397755.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
gi|283951637|gb|ADB46440.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
Length = 264
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I + DSG+GGL VL+ ++ MP FI++ D PYGN ++ + + L+
Sbjct: 5 DPIGVIDSGVGGLTVLKWLQEKMPHERFIFIGDTARTPYGNRSREEIQG-FVGEMTAWLN 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNT L D +++ + + +G T++ + L+T T+
Sbjct: 64 RRNIKQLVVACNTITVLGTDVIKNGY-DFSVIGMKKGAHMVEGVTRNKKVGFLATDFTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVE-------EYACGIKIKEDEIKKEIEGCFIE 186
I + + +E E A IK D++K+
Sbjct: 123 SGAHKKEIQEMDPEIQVFGQGCPKFVPLIEGEQFGSPELAAAIKEYTDKLKE-------- 174
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
D ++L+CTHYP + R+ V LD ++ + A
Sbjct: 175 ---YDVDTVMLSCTHYPFVEKEIREAFGPGVTILDPAERTVQAA 215
>gi|150021250|ref|YP_001306604.1| glutamate racemase [Thermosipho melanesiensis BI429]
gi|149793771|gb|ABR31219.1| glutamate racemase [Thermosipho melanesiensis BI429]
Length = 263
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 118/260 (45%), Gaps = 42/260 (16%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG+ VL+K+ ++ H+IY+AD PYG AL+ ++ F D K
Sbjct: 3 IGLFDSGIGGISVLKKLTYINGA-HYIYIADTERAPYGLRTSEALES-FVWEFVDFFHKK 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-- 133
+ ACNT ++I L + + ++ I+ + +S + ++ T T++
Sbjct: 61 KVNEIFAACNTTDSII---LENNLDLVIKYNSI--IRAGVSAAKSSKVGVIGTNVTIKNG 115
Query: 134 --RTY---TSNLIHSYVSQCHIHLVSSMILASRVEEYACG---IKIKEDEIKKEIEGCFI 185
R Y ++ +Q + LV + R+ E + +K++ +K+
Sbjct: 116 SYRRYLEVEGKEVYQKATQLFVSLVEEGVFYGRMVEAIANYYLLPLKKENVKE------- 168
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
++L CTH+P + + ++ P V +D ++ +++ LL + NT + V
Sbjct: 169 ---------LILGCTHFPFLKGIISRVLP-KVRIIDPAEELSK----LLVKNNTRRPFV- 213
Query: 246 DDHALFLSGKPDIAMRRLMQ 265
+++G P R+L +
Sbjct: 214 ---EFYVTGDPKEFERKLKR 230
>gi|197693600|gb|ACH71469.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|33865544|ref|NP_897103.1| putative aspartate and glutamate racemase:glutamate racemase
[Synechococcus sp. WH 8102]
gi|33632713|emb|CAE07525.1| Putative Aspartate and glutamate racemases:Glutamate racemase
[Synechococcus sp. WH 8102]
Length = 262
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 33/265 (12%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSG+GGL VL+++ +Y+ D PYGN A +R+ L Q
Sbjct: 8 FDSGVGGLTVLRRVLERHGSVACVYLGDTARVPYGN-RPPAEIRRIAAEVVGWLRDQQVS 66
Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L +D E ++ P + +GA AAA ++ + +L+TPAT+
Sbjct: 67 TVVMACNTTNALARDVAEGQAGGPVIGLIGA------AAAMVETRRVGVLATPATV---- 116
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYAC--------GIKIKEDEIKKEIEGCFIEKE 188
S + + ++ + V E AC DE++ ++ ++E
Sbjct: 117 --------ASAAYSASIEALHPGALVVEQACPAFVPLIEAGDFSSDELR-QVAKVYLEPL 167
Query: 189 -GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVF 245
+ IVL CTHYPL++ + +QL P + +D + +AR+ +L PR T
Sbjct: 168 LAASVETIVLGCTHYPLLIPLLKQLLPDAIQLVDPALGVARQLDAVLGVPRSTPGDTLEL 227
Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270
++ PD R G +
Sbjct: 228 GQCRFCVTADPDGFANRATPWLGAR 252
>gi|289424939|ref|ZP_06426718.1| glutamate racemase [Propionibacterium acnes SK187]
gi|289154638|gb|EFD03324.1| glutamate racemase [Propionibacterium acnes SK187]
gi|313763385|gb|EFS34749.1| glutamate racemase [Propionibacterium acnes HL013PA1]
gi|313814691|gb|EFS52405.1| glutamate racemase [Propionibacterium acnes HL059PA1]
gi|314914537|gb|EFS78368.1| glutamate racemase [Propionibacterium acnes HL005PA4]
gi|314917605|gb|EFS81436.1| glutamate racemase [Propionibacterium acnes HL050PA1]
gi|314919639|gb|EFS83470.1| glutamate racemase [Propionibacterium acnes HL050PA3]
gi|314924269|gb|EFS88100.1| glutamate racemase [Propionibacterium acnes HL001PA1]
gi|314956853|gb|EFT01007.1| glutamate racemase [Propionibacterium acnes HL027PA1]
gi|314957644|gb|EFT01747.1| glutamate racemase [Propionibacterium acnes HL002PA1]
gi|314967393|gb|EFT11492.1| glutamate racemase [Propionibacterium acnes HL082PA2]
gi|314968973|gb|EFT13071.1| glutamate racemase [Propionibacterium acnes HL037PA1]
gi|315098010|gb|EFT69986.1| glutamate racemase [Propionibacterium acnes HL059PA2]
gi|315102644|gb|EFT74620.1| glutamate racemase [Propionibacterium acnes HL046PA1]
gi|315104465|gb|EFT76441.1| glutamate racemase [Propionibacterium acnes HL050PA2]
gi|315106208|gb|EFT78184.1| glutamate racemase [Propionibacterium acnes HL030PA1]
gi|327325474|gb|EGE67278.1| glutamate racemase [Propionibacterium acnes HL103PA1]
gi|327451223|gb|EGE97877.1| glutamate racemase [Propionibacterium acnes HL087PA3]
gi|327452580|gb|EGE99234.1| glutamate racemase [Propionibacterium acnes HL083PA2]
gi|328751976|gb|EGF65592.1| glutamate racemase [Propionibacterium acnes HL025PA2]
gi|328754780|gb|EGF68396.1| glutamate racemase [Propionibacterium acnes HL087PA1]
Length = 284
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEA------ 181
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESG 229
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+ + FL+ + + RRLM+GF
Sbjct: 230 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|37811838|gb|AAR03910.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHV-------FRQLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI + LS P V++L ++ + A
Sbjct: 170 LKILPEVVILGCTHFPLIAQKIEGYFMEYFALSTPPLLIHSGDAIVEYLQQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|224418377|ref|ZP_03656383.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|253827696|ref|ZP_04870581.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|313141908|ref|ZP_07804101.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|253511102|gb|EES89761.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|313130939|gb|EFR48556.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
Length = 259
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL + IY D PYG + + + D ++
Sbjct: 6 IGLFDSGVGGISVLGNLINSKTFEEIIYYGDTARVPYGTRSKETIIQYSLEAL-DFFKQF 64
Query: 76 QPVLSVIACNT--AFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNT A+ L + + +P + + V A+ S ++ +L T AT+
Sbjct: 65 KLDLLVVACNTISAYGLEAMQKATNYPIIGVIEPGVLALTNNLQNKDSKIL-VLGTKATI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ + C I+ +++ + VEE G KI E ++ + + ++
Sbjct: 124 QSQLYQTLLENQGYSC-INSLATSLFVPLVEEGIFGGKILESVME-----YYFQDYTEKP 177
Query: 193 DVIVLACTHYPL----IVHVFRQLSPWP 216
D I+L CTH+PL I H F+ P P
Sbjct: 178 DAIILGCTHFPLISKTIAHYFQNKFPTP 205
>gi|313828237|gb|EFS65951.1| glutamate racemase [Propionibacterium acnes HL063PA2]
gi|315110459|gb|EFT82435.1| glutamate racemase [Propionibacterium acnes HL030PA2]
Length = 284
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEA------ 181
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDDVTLISSSHQCARASYSLMVESG 229
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+ + FL+ + + RRLM+GF
Sbjct: 230 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|300025005|ref|YP_003757616.1| glutamate racemase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526826|gb|ADJ25295.1| Glutamate racemase [Hyphomicrobium denitrificans ATCC 51888]
Length = 281
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 30/223 (13%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + F+Y+AD PYGN A+ D+ +
Sbjct: 2 IGVFDSGLGGLTVLRVLTQRFKAADFVYLADHAHVPYGNRPSDAIVGYTRDCVEDLFARG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-------PSMAFLGAVPAIKQAAAYT---------- 118
L ++ CNTA + L+ + + LG V +AA T
Sbjct: 62 AK-LVLLGCNTATAVALRRLQQEWLPRSPWAGTHNVLGIVAPTVEAATQTPWAVTSPQYP 120
Query: 119 ---QSGLISILSTPATLRRTYTSNLIHSYVSQ-CHIHLVSSMI---LASRVEEYACGIKI 171
+ I + T RT T+ + + + C V I LA +EE +
Sbjct: 121 QKYNTDTIGVFGT----TRTVTAGVYPEEIGKRCPKVTVVQQICSELAGAIEEKQPEAHL 176
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
E+ ++ I G + +G +L CTH+PL+ H+FR+ P
Sbjct: 177 -EELVRAGITGLLDQTDGVPPHRAILGCTHFPLVEHLFRKHLP 218
>gi|332669874|ref|YP_004452882.1| glutamate racemase [Cellulomonas fimi ATCC 484]
gi|332338912|gb|AEE45495.1| glutamate racemase [Cellulomonas fimi ATCC 484]
Length = 271
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+ D + PYG A++ + + D++D
Sbjct: 6 IGIFDSGVGGLTVARSVLDQLPHESTLYIGDTLNTPYGPKPLAAVRAHALEVMDDLVDAG 65
Query: 76 QPVLSVIACNTA-FTLIKDE-----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L VIACNTA +++D LR P + + +PA ++A A T++G I ++ T
Sbjct: 66 VKLL-VIACNTASAAVLRDARERYTLRRGIPVVEVI--LPAARRAVAATRTGRIGVIGTR 122
Query: 130 ATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ R Y ++ + L +S VE G+ + + E ++
Sbjct: 123 ATVDSRAYDD----AFAVAPGVTL-TSQACPRFVELVEAGVTSGPEVLAVAHEYLDPVRD 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYPL+ V + V + +S+ A+
Sbjct: 178 AG-VDTLVLGCTHYPLLTGVISYVMGDDVTLVSSSEETAK 216
>gi|197693650|gb|ACH71494.1| glutamate racemase [Helicobacter pylori]
gi|197693652|gb|ACH71495.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L V+ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
+VI+L CTH+PLI RQ+ +
Sbjct: 173 LPEVIILGCTHFPLIA---RQIEGY 194
>gi|30959108|gb|AAO73313.1| glutamate racemase [Helicobacter pylori]
Length = 231
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI H
Sbjct: 173 LPEVIILGCTHFPLIAH 189
>gi|139438502|ref|ZP_01772018.1| Hypothetical protein COLAER_01010 [Collinsella aerofaciens ATCC
25986]
gi|133776041|gb|EBA39861.1| Hypothetical protein COLAER_01010 [Collinsella aerofaciens ATCC
25986]
Length = 294
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 15/234 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P Y D PYG + ++ L K+
Sbjct: 14 IGVFDSGLGGLTVARAIATALPHESVYYFGDTKRCPYGTRTEDEVRS-FALQAGRWLSKH 72
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + + +G + P + A T++ + +L+T T+R
Sbjct: 73 DVKIMVIACNTATAAALRLAQQVL-DVPVIGVIAPGARAAINSTRTRRVGVLATNLTIRS 131
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKE----------IEGC 183
+ I + ++ + VE E A G ++E ++ E + G
Sbjct: 132 GAYTRAIQDLDAGVDVYGCPASSFVEVVEHELASGAHLQEQWLENEDIFDTPAVRALVGA 191
Query: 184 FIEKEGKRT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+E R D +VL CTH+PL+V R V + +++ R +L R
Sbjct: 192 TVEPLRDRGIDTVVLGCTHFPLLVGPIRHALGPGVRVVSSAEETTRELTDILTR 245
>gi|116490738|ref|YP_810282.1| glutamate racemase [Oenococcus oeni PSU-1]
gi|290890158|ref|ZP_06553240.1| hypothetical protein AWRIB429_0630 [Oenococcus oeni AWRIB429]
gi|122277078|sp|Q04G05|MURI_OENOB RecName: Full=Glutamate racemase
gi|116091463|gb|ABJ56617.1| glutamate racemase [Oenococcus oeni PSU-1]
gi|290480202|gb|EFD88844.1| hypothetical protein AWRIB429_0630 [Oenococcus oeni AWRIB429]
Length = 281
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++ +P +V D+ PYG ++K + + ++ K+
Sbjct: 9 IDSGLGGLTVVREALKQLPNESVYFVGDEARMPYGPRPTVEIQKFTLQMADFLVKKHNIK 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL-ISILSTPATLR-RTY 136
V+ACNTA +LR+ + + +G + A A L ++++ T +T+ + Y
Sbjct: 69 ALVVACNTATAQALPQLRA-YLEIPVIGVISAGALAGINATRNLHVNVIGTQSTVESKAY 127
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDVI 195
LI + S I + VE G + + + I EK +GK++D +
Sbjct: 128 YDQLI-ALNSDLVIEQKALPEFVQLVESDMAGTPKGKQIVYQAIHNWMEEKNDGKKSDTL 186
Query: 196 VLACTHYPLI 205
VL CTH+P++
Sbjct: 187 VLGCTHFPIL 196
>gi|197693670|gb|ACH71504.1| glutamate racemase [Helicobacter pylori]
gi|197693672|gb|ACH71505.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L V+ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPVVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 173 LPEVVILGCTHFPLIAH 189
>gi|197693862|gb|ACH71600.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D A K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPATIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTLLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693682|gb|ACH71510.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQIK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LKILPEVVILGCTHFPLIAH 189
>gi|127663884|gb|ABO28624.1| glutamate recemase [Helicobacter pylori 908]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 30/247 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIA---------RRARCLLP 235
+VI+L CTH+PLI P P + + D+I ++ C P
Sbjct: 173 LPEVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQNYALKKNACAFP 232
Query: 236 RINTHQT 242
++ H +
Sbjct: 233 KVEFHAS 239
>gi|217032399|ref|ZP_03437894.1| hypothetical protein HPB128_25g47 [Helicobacter pylori B128]
gi|298736238|ref|YP_003728764.1| glutamate racemase [Helicobacter pylori B8]
gi|216945966|gb|EEC24582.1| hypothetical protein HPB128_25g47 [Helicobacter pylori B128]
gi|298355428|emb|CBI66300.1| glutamate racemase [Helicobacter pylori B8]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|50843138|ref|YP_056365.1| glutamate racemase [Propionibacterium acnes KPA171202]
gi|50840740|gb|AAT83407.1| glutamate racemase [Propionibacterium acnes KPA171202]
Length = 297
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D
Sbjct: 22 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 80
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 81 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 140
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 141 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEA------ 194
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
GC D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 195 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESG 242
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+ + FL+ + + RRLM+GF
Sbjct: 243 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 275
>gi|254779458|ref|YP_003057563.1| glutamate racemase [Helicobacter pylori B38]
gi|254001369|emb|CAX29354.1| Glutamate racemase [Helicobacter pylori B38]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQIK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693680|gb|ACH71509.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQFNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 170 LKILPEVVILGCTHFPLIAH 189
>gi|317010769|gb|ADU84516.1| glutamate racemase [Helicobacter pylori SouthAfrica7]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG +D A K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDPATIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQHVKNKNTPIL-VLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFAPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 173 VPEVVILGCTHFPLIAQ 189
>gi|210134751|ref|YP_002301190.1| glutamate racemase [Helicobacter pylori P12]
gi|226707586|sp|B6JLD2|MURI_HELP2 RecName: Full=Glutamate racemase
gi|210132719|gb|ACJ07710.1| glutamate racemase [Helicobacter pylori P12]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|108562952|ref|YP_627268.1| glutamate racemase [Helicobacter pylori HPAG1]
gi|123373795|sp|Q1CTX8|MURI_HELPH RecName: Full=Glutamate racemase
gi|107836725|gb|ABF84594.1| glutamate racemase [Helicobacter pylori HPAG1]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234
+V++L CTH+PLI LS P V +L ++ + A C
Sbjct: 173 LPEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQKYALKKNA-CAF 231
Query: 235 PRINTHQT 242
P++ H +
Sbjct: 232 PKVEFHAS 239
>gi|182440359|ref|YP_001828078.1| putative glutamate racemase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178468875|dbj|BAG23395.1| putative glutamate racemase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 261
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 11/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + + + +
Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDITALALDVAR-AAAAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIVACNTASVHALPALRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA +E E I + + +
Sbjct: 120 PYQRGLIGDFGGTAEVTEVPCPGLADALEHG------DEAGIDRAVAAAAALTP-RDVRA 172
Query: 195 IVLACTHYPLIVHVFR 210
+VL CTHY L+ R
Sbjct: 173 VVLGCTHYELVAARIR 188
>gi|197693772|gb|ACH71555.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTPAT 131
Q L ++ACNTA L +E++ F + +G + AIKQ ++ I +L T AT
Sbjct: 62 QIELLIVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 120 IQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLK 171
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPW 215
+VI+L CTH+PLI RQ+ +
Sbjct: 172 ILPEVIILGCTHFPLIA---RQIEGY 194
>gi|329847625|ref|ZP_08262653.1| asp/Glu/Hydantoin racemase family protein [Asticcacaulis
biprosthecum C19]
gi|328842688|gb|EGF92257.1| asp/Glu/Hydantoin racemase family protein [Asticcacaulis
biprosthecum C19]
Length = 284
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 26/234 (11%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL + + +P+ FIY+AD PYG+ + + L + L +
Sbjct: 5 VFDSGVGGLSIHHALVNRLPQADFIYLADQKHTPYGDRSGEEIVE-LTRQGCETLFEAGA 63
Query: 78 VLSVIACNTAFTLIKDELRSTFPS---------MAFLG-AVPAIKQAAAY---------- 117
L V+ACNTA + L+ T+ S + LG VP I+ A
Sbjct: 64 SLVVLACNTASAVALRRLQQTWLSGFRKTYKRPVNVLGIIVPTIEAATGLPWEHEAERRG 123
Query: 118 ---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
+ ++ + +T AT R I + + LA +E+ A +
Sbjct: 124 EKIEKLDIVGVFATVATARSRVYEIEIDKRRQDIAVFTEACSGLADMIEKGADRDSLSA- 182
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+IK +E I + G+ D +L CTHY L+ +FRQ P + S+A+
Sbjct: 183 KIKGHVESLRI-RVGRYPDRAILGCTHYELVADLFRQHLPAGTPIIHQPPSVAK 235
>gi|317009473|gb|ADU80053.1| glutamate racemase [Helicobacter pylori India7]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 32/248 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234
+V++L CTH+PLI LS P V++L ++ ++ C
Sbjct: 173 LPEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYAL-KKNTCAF 231
Query: 235 PRINTHQT 242
P++ H +
Sbjct: 232 PKVEFHAS 239
>gi|15645174|ref|NP_207344.1| glutamate racemase [Helicobacter pylori 26695]
gi|2492984|sp|P56068|MURI_HELPY RecName: Full=Glutamate racemase
gi|2313665|gb|AAD07615.1| glutamate racemase (glr) [Helicobacter pylori 26695]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 32/248 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRARCLL 234
+V++L CTH+PLI LS P V++L + ++ + A C
Sbjct: 173 LPEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQNYALKKNA-CAF 231
Query: 235 PRINTHQT 242
P++ H +
Sbjct: 232 PKVEFHAS 239
>gi|208434471|ref|YP_002266137.1| glutamate racemase [Helicobacter pylori G27]
gi|226707587|sp|B5Z6S2|MURI_HELPG RecName: Full=Glutamate racemase
gi|208432400|gb|ACI27271.1| glutamate racemase [Helicobacter pylori G27]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-EKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|328462612|gb|EGF34566.1| glutamate racemase [Lactobacillus helveticus MTCC 5463]
Length = 266
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 42/269 (15%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I + DSG+GG V++ + L P +++ D PYG+ +
Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVKVIEKL-PHESTVFIGDSANMPYGDKSREQIIE 51
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-Y 117
++ + FL + L + ACNTA + L++ +G + + AAA
Sbjct: 52 LTRRSVKFLLQKKVK-----LIIFACNTATAVAMPTLQNEV-EQQIIGVIQSGSLAAART 105
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--- 174
T++ +++ +TP T+ H+Y + ++ E A I+ ++D
Sbjct: 106 TKNKKVAVAATPVTINS-------HAYQKEIKFRDPDIKVMEVAAPELAPLIESQKDYDT 158
Query: 175 ---EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+K+ I + + D VL CTHYPLI + F + + +D +D +A+
Sbjct: 159 NLAAVKRSIAPL----KDQDFDTFVLGCTHYPLIQNEFVEALGDKIQIVDPADQVAQYTF 214
Query: 232 CLLPRINTHQTRVFDD---HALFLSGKPD 257
++ R + FD H + +G PD
Sbjct: 215 NVMRRDGLFSS--FDQAGKHEYYTTGDPD 241
>gi|197693626|gb|ACH71482.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693796|gb|ACH71567.1| glutamate racemase [Helicobacter pylori]
gi|197693798|gb|ACH71568.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|1709184|sp|P52972|MURI_BACSH RecName: Full=Glutamate racemase
gi|849141|gb|AAA68029.1| glutamate racemase [Lysinibacillus sphaericus]
Length = 265
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 24/249 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V +++ +P Y+ D PYG + + + + L+K
Sbjct: 5 IGVIDSGVGGLTVAKEIIKRLPNETIYYIGDTARCPYGPRTRQEV-RNFTWQMAKALEKM 63
Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131
+ VIACNTA + + L+ FP + + GA A+K+ T+ + +L+T T
Sbjct: 64 NIKMLVIACNTATAVALESLQRNMPFPVLGVINRGARAAVKK----TKRHEVVVLATEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK---- 187
++ + S + HI ++ VE E K + I +
Sbjct: 120 IKSGAYEEALLSLNTSTHIIPLACPTFVPLVE---------SGEYKGQFANNLIAEGLKP 170
Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVF 245
+ ++ D ++L CTHYP++ + V L +++ A+ +L T T
Sbjct: 171 LKNEQFDTVILGCTHYPILQKQIEAVVGEDVFVLSSAEETAKDVEEMLAYNGTLADTNAK 230
Query: 246 DDHALFLSG 254
H + +G
Sbjct: 231 PAHKFYATG 239
>gi|58336762|ref|YP_193347.1| gluracemase [Lactobacillus acidophilus NCFM]
gi|227903323|ref|ZP_04021128.1| glutamate racemase [Lactobacillus acidophilus ATCC 4796]
gi|75433023|sp|Q5FLV8|MURI_LACAC RecName: Full=Glutamate racemase
gi|58254079|gb|AAV42316.1| gluracemase [Lactobacillus acidophilus NCFM]
gi|227868952|gb|EEJ76373.1| glutamate racemase [Lactobacillus acidophilus ATCC 4796]
Length = 267
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 31/235 (13%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN--WED--H 58
+DN P I + DSG GGL V +K+ +P I++ D+ PYG+ ED +
Sbjct: 1 MDNRP--------IGLLDSGFGGLSVAKKVIEKLPNESTIFIGDNAHIPYGDRTREDIIN 52
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
++ + FL + L VIACNTA + ++ +G + + AAA T
Sbjct: 53 LTRRSVKFLLEKNVK-----LIVIACNTATAVAMPTMQKEV-EQQIIGVIQSGALAAART 106
Query: 119 QSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKED 174
+ ++ I + + +++ LA VE +YA +K+
Sbjct: 107 TKNKNVAVVATNVTVASHAYQKEIKFRDPEIKVTELAAPKLAPLVEAQKDYATNLKV--- 163
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ-LSPWPVDWLDNSDSIAR 228
+K+ + GK D +VL CTHYPLI F + ++ V LD +D +A+
Sbjct: 164 -VKESLAPLM----GKEFDTLVLGCTHYPLIQKEFEEAINNKEVTILDPADQVAQ 213
>gi|308184333|ref|YP_003928466.1| glutamate racemase [Helicobacter pylori SJM180]
gi|308060253|gb|ADO02149.1| glutamate racemase [Helicobacter pylori SJM180]
Length = 255
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|118586558|ref|ZP_01544000.1| glutamate racemase [Oenococcus oeni ATCC BAA-1163]
gi|118432999|gb|EAV39723.1| glutamate racemase [Oenococcus oeni ATCC BAA-1163]
Length = 281
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 6/234 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++ +P +V D+ PYG ++K + + ++ K+
Sbjct: 9 IDSGLGGLTVVREALKQLPNESVYFVGDEARMPYGPRPTVEIQKFTLQMADFLVKKHNIK 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLR-RTY 136
V+ACNTA +L++ + + +G + A A + T++ ++++ T +T+ + Y
Sbjct: 69 ALVVACNTATAQALPQLKA-YLEIPVIGVISAGALAGISATRNLHVNVIGTQSTVESKAY 127
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDVI 195
LI + S I + VE G + + + I EK +GK++D +
Sbjct: 128 YDQLI-ALNSDLVIEQKALPEFVQLVESDIAGTSQGKQIVYQAIHNWMEEKNDGKKSDTL 186
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLD-NSDSIARRARCLLPRINTHQTRVFDDH 248
VL CTH+P++ + V +D S+ I + A L H ++ + H
Sbjct: 187 VLGCTHFPILKKEIQAAVDKNVAVVDPASEEILQTAEILRKNNAFHDSKNINHH 240
>gi|260575249|ref|ZP_05843249.1| glutamate racemase [Rhodobacter sp. SW2]
gi|259022509|gb|EEW25805.1| glutamate racemase [Rhodobacter sp. SW2]
Length = 270
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 50/226 (22%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--------NWEDHALKKRLMF 66
++ +FDSG+GGL VL ++ +PE F+Y+ D+ PYG N A+++
Sbjct: 2 AVGVFDSGLGGLTVLDALQKRLPEVPFVYLGDNAHAPYGVRTAEDIFNLTCAAVER---- 57
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG--- 121
L+++ D L ++ACNTA ++ ++ P LG + +A Q G
Sbjct: 58 LWAEGCD-----LVILACNTASASALKRMQESWVPPGKRVLGVFVPLIEALTERQWGDNS 112
Query: 122 --------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI-- 171
+++ +TPAT+ S+ ++ + VE CG +
Sbjct: 113 PPREVDVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDA 160
Query: 172 --KEDEIKKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211
+ DEI E + +E +R VL CTHYPL+ H+F +
Sbjct: 161 IEQGDEILAEALVRSHVEALKRRMPLPQAAVLGCTHYPLMQHIFAE 206
>gi|153008159|ref|YP_001369374.1| Asp/Glu racemase [Ochrobactrum anthropi ATCC 49188]
gi|151560047|gb|ABS13545.1| Asp/Glu racemase [Ochrobactrum anthropi ATCC 49188]
Length = 278
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L + + +FD+GIG +++ +R P+ IY AD FPYG L L + S I
Sbjct: 13 LNDPVAVFDAGIGSYALVELIRRSQPQRDIIYFADRASFPYGAKSRDQL---LSIMRSTI 69
Query: 72 --LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L V+A N ++ D L+S F ++ G P ++ A A + SG ++++
Sbjct: 70 QYLTSLGAQTIVLASNAPSVMVLDTLKSEF-AVPVYGVAPPVRTALAASHSGKVAVMGVR 128
Query: 130 ATLRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC-FIEK 187
+ + ++ + + + L+++ + VE A ++ ++ +K C I
Sbjct: 129 SMIESEELADFVRTQADNPGDVALINASAMVELVENGAF-LRQPDETAQKVAAFCDDIAA 187
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226
D + L+ TH P + F P W +LD +D +
Sbjct: 188 SYPLIDTLTLSSTHLPWLRPFFETARPGW--QFLDPADDV 225
>gi|254525989|ref|ZP_05138041.1| glutamate racemase [Prochlorococcus marinus str. MIT 9202]
gi|221537413|gb|EEE39866.1| glutamate racemase [Prochlorococcus marinus str. MIT 9202]
Length = 264
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWEDHALKKRLMFLFSDILDKY 75
IFDSGIGG +L + + Y+AD P+G N+++ L + + F +DK
Sbjct: 7 IFDSGIGGFTILNSLLKTRKDVEVFYLADTKRIPFGGKNFKEIRLIAKEICNF--FVDKN 64
Query: 76 QPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ACNT A ++++ L+ P + +V I +I +L+T T
Sbjct: 65 LDAL-LVACNTTNACALDIMENNLK--VPCFDLINSVSGI------VDKQIIGVLATQTT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y N I+S I S +E+ K+ D++ + K
Sbjct: 116 VRSSYYKNAINSKKENTIIFQQECPEFVSEIEKE----KLNLDKLNYLSDLYLRPLINKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDDHA 249
+ ++L C+HYPLI R+ + +D S ++ +R +P+ ++ +++
Sbjct: 172 IEELILGCSHYPLIYDFLRKKLDSNITIIDPSVALIKRFNKFFDIPKTACYERLSYENVE 231
Query: 250 LFLSGKPD 257
F++ + D
Sbjct: 232 FFVTSERD 239
>gi|328955986|ref|YP_004373319.1| glutamate racemase [Coriobacterium glomerans PW2]
gi|328456310|gb|AEB07504.1| glutamate racemase [Coriobacterium glomerans PW2]
Length = 309
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 27/232 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG V + + MP +Y+ D PYG ++ + + + ++ +
Sbjct: 16 IGVFDSGVGGFTVARAISRAMPHESIVYIGDTARCPYGTRGVEEVRAFVAQVGTWLVRQR 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
V+ VIACNTA + F P + +G P + A T++ I +L+T T+
Sbjct: 76 VKVI-VIACNTATASALGLAQRMFDVPVIGVIG--PGARAAVLATRTREIGVLATDLTIA 132
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE-----------------I 176
I + + +H ++ VE G I D +
Sbjct: 133 SGAYLRAIKNLDAGVGVHGCATQRFVELVESRLAG-GIGADAQWLDGADLFDTPEVRALV 191
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++E E G D +VL CTH+PL+V R + V + +++ R
Sbjct: 192 RRETE----PLRGLDIDAVVLGCTHFPLLVRPIRAVLGRGVHVVSSAEETMR 239
>gi|217969659|ref|YP_002354893.1| glutamate racemase [Thauera sp. MZ1T]
gi|217506986|gb|ACK53997.1| glutamate racemase [Thauera sp. MZ1T]
Length = 268
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 6/216 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V++ + +P +Y D PYG + A + ++ L +
Sbjct: 8 IGVFDSGVGGLTVVRALMERLPLEDIVYFGDTARVPYG-VKSVATIEHFTAQITEFLLQR 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPATLRR 134
+ +IACNT + D + + L + A +AA G I ++ TP T+
Sbjct: 67 DVKMLIIACNTMAAVAADVVHRLAAGIPVLDVIEAGARAAVAASPGRRIGVIGTPTTINS 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ +H ++ + + VEE ++ ++ + E+ D
Sbjct: 127 NAYARRMHELDPAVRVYSQACPLFVPLVEEGWLDHEVTRLTAQEYLRPVLAEE----VDS 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+VL CTHYPL+ + R ++ V +D++ + A A
Sbjct: 183 LVLGCTHYPLLKPLLRDVAGARVRLIDSALTTAELA 218
>gi|315499265|ref|YP_004088069.1| glutamate racemase [Asticcacaulis excentricus CB 48]
gi|315417277|gb|ADU13918.1| Glutamate racemase [Asticcacaulis excentricus CB 48]
Length = 284
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 108/275 (39%), Gaps = 42/275 (15%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL + + + MP FIY+ D PYG + + L + L
Sbjct: 3 AIGVFDSGVGGLSIHRALVDRMPGADFIYLGDQKHAPYGERSGEEIVE-LTRQGCETLFN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-------------------PSMAFLGAVP----AI 111
+ V+ CNTA + L+ST+ P++ +P A
Sbjct: 62 AGASIVVLGCNTASAVALRRLQSTWLADYRKSIGRPVNVLGIIVPTIEAATGLPWEHEAE 121
Query: 112 KQAAAYTQSGLISILSTPATLR-RTYTSNL------IHSYVSQCHIHLVSSMILASRVEE 164
++ A ++ I T AT R R Y + + + C I L ++MI A EE
Sbjct: 122 RRGAKIENVDVLGIFCTTATARSRVYEIEIDKRRQDLAVFTEPC-IGL-AAMIEAGESEE 179
Query: 165 YACG-IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
++ + +K I G+ D +L CTHY +I +F+ P +
Sbjct: 180 KLTAVVESRVQALKTRI--------GRYPDRAILGCTHYEIIGELFKAALPEGTPLIHQP 231
Query: 224 DSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258
S+A + R + +HA +G P +
Sbjct: 232 SSVANALESYIARHPEYAIGTSANHAFLTTGVPGL 266
>gi|197693754|gb|ACH71546.1| glutamate racemase [Helicobacter pylori]
gi|197693756|gb|ACH71547.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|37811872|gb|AAR03940.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693716|gb|ACH71527.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693644|gb|ACH71491.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|30959110|gb|AAO73314.1| glutamate racemase [Helicobacter pylori]
Length = 231
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE G ++ E ++ I E
Sbjct: 121 QSNAYDNALKQQGYLNISHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKILPE-- 175
Query: 191 RTDVIVLACTHYPLIVH 207
VI+L CTH+PLI
Sbjct: 176 ---VIILGCTHFPLIAQ 189
>gi|197693574|gb|ACH71456.1| glutamate racemase [Helicobacter pylori]
gi|197693740|gb|ACH71539.1| glutamate racemase [Helicobacter pylori]
gi|197693742|gb|ACH71540.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFGEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 173 LPEVVILGCTHFPLIAQ 189
>gi|157413034|ref|YP_001483900.1| glutamate racemase [Prochlorococcus marinus str. MIT 9215]
gi|157387609|gb|ABV50314.1| Glutamate racemase [Prochlorococcus marinus str. MIT 9215]
Length = 264
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLMFLFSDILDK 74
IFDSGIGG +L + + Y+AD P+G E + K + F +DK
Sbjct: 7 IFDSGIGGFTILNSLLKTRKDIEVFYLADTKRIPFGGKNFVEIRLIAKEICNFF---VDK 63
Query: 75 YQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L ++ACNT A ++++ L+ P + +V I +I +L+T
Sbjct: 64 NLDAL-LVACNTTNACALDIMENNLK--VPCFDLINSVSGI------VDKQIIGVLATQT 114
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R +Y N I+S I S +E+ K+ D++ + K
Sbjct: 115 TVRSSYYKNAINSKKENTIIFQQECPEFVSEIEKE----KLNLDKLNYLSDLYLRPLINK 170
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDDH 248
+ ++L C+HYPLI R+ + +D S ++ ++ +P+ ++ +++
Sbjct: 171 NIEELILGCSHYPLIYDFLRKKLDSNITIIDPSVALIKKFNQFFDIPKTACYEGLSYENV 230
Query: 249 ALFLSGKPD 257
F++ K D
Sbjct: 231 EFFVTSKRD 239
>gi|37521065|ref|NP_924442.1| glutamate racemase [Gloeobacter violaceus PCC 7421]
gi|81710349|sp|Q7NKI2|MURI_GLOVI RecName: Full=Glutamate racemase
gi|35212061|dbj|BAC89437.1| glutamate racemase [Gloeobacter violaceus PCC 7421]
Length = 265
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 15/242 (6%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL---KKRLMFLFSDILDK 74
+FDSG+GGL VL+++ +P IY AD PYG+ + + ++ F
Sbjct: 5 LFDSGLGGLTVLREIARRLPAQPVIYFADTARLPYGSRTPAEICRYVREILHWFEQ--QG 62
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Q VL +ACNT+ L + S + +G + A AA + I +++T AT++
Sbjct: 63 VQRVL--MACNTSSALALPVVASEY--ALKVGGLIAPAARAAARRGRRIGVIATAATVQS 118
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ I + + + V+ VE G ++ +E++ +R D
Sbjct: 119 HAYTRAIQALTPRAQVWEVACPEFVPLVE----GGRLLGEEVRSVARRYLAPLVEQRIDT 174
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+V CTHYP + V L P V +D + + LP +TR F+SG
Sbjct: 175 LVYGCTHYPYLAPVIGDLLPASVRCVDPAVAAVAELAAALPPSRRLETRAACH--FFVSG 232
Query: 255 KP 256
P
Sbjct: 233 DP 234
>gi|197693562|gb|ACH71450.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L V+ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFAPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
VI+L CTH+PLI RQ+ +
Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194
>gi|77412365|ref|ZP_00788676.1| glutamate racemase [Streptococcus agalactiae CJB111]
gi|77161585|gb|EAO72585.1| glutamate racemase [Streptococcus agalactiae CJB111]
Length = 159
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL V+++M +PE I++ D PYG +++ + + +L K +
Sbjct: 9 LDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLTKNVKM 68
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ VIACNTA + E++ + LG + P A T SG + I+ TP T++
Sbjct: 69 I-VIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNSGKVGIIGTPMTVK 122
>gi|197693606|gb|ACH71472.1| glutamate racemase [Helicobacter pylori]
gi|197693760|gb|ACH71549.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693738|gb|ACH71538.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 15/195 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLI 205
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLI 187
>gi|197693598|gb|ACH71468.1| glutamate racemase [Helicobacter pylori]
gi|197693774|gb|ACH71556.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
+VI+L CTH+PLI RQ+ +
Sbjct: 173 LPEVIILGCTHFPLIA---RQIEGY 194
>gi|197693728|gb|ACH71533.1| glutamate racemase [Helicobacter pylori]
gi|197693866|gb|ACH71602.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693704|gb|ACH71521.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693588|gb|ACH71463.1| glutamate racemase [Helicobacter pylori]
gi|197693852|gb|ACH71595.1| glutamate racemase [Helicobacter pylori]
gi|197693854|gb|ACH71596.1| glutamate racemase [Helicobacter pylori]
gi|197693856|gb|ACH71597.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693848|gb|ACH71593.1| glutamate racemase [Helicobacter pylori]
gi|197693850|gb|ACH71594.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693564|gb|ACH71451.1| glutamate racemase [Helicobacter pylori]
gi|197693744|gb|ACH71541.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693632|gb|ACH71485.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693630|gb|ACH71484.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
+VI+L CTH+PLI RQ+ +
Sbjct: 173 LPEVIILGCTHFPLIA---RQIEGY 194
>gi|330717928|ref|ZP_08312528.1| glutamate racemase [Leuconostoc fallax KCTC 3537]
Length = 277
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 18/212 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG---NWEDHALKKRLMFLFSDIL 72
I + DSGIGGL V+++ +P IY+ D PYG E A K++ +D L
Sbjct: 7 IGMVDSGIGGLTVVKESLEKLPNEQIIYIGDTARMPYGPRTPEEVIAFTKQM----ADFL 62
Query: 73 DKYQPV-LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ + L VIACNTA L+ P + +G + +A T + I I++T
Sbjct: 63 IATKDIKLLVIACNTATASALIPLQEMLP-IPVIGVINSGASRAVQATHNQKIGIIATEG 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ ++ I + Q + + VE+ + + + ++K ++ +
Sbjct: 122 TIASQIYTHKIRALNQQIEVFSQAEPDFVKLVEDNQYRLPVAQHQVKAHLQSL----KQA 177
Query: 191 RTDVIVLACTHYPL----IVHVFRQLSPWPVD 218
D ++L CTH+PL IV F +L +D
Sbjct: 178 NIDTLILGCTHFPLLRPFIVEAFGELDVTLID 209
>gi|88856297|ref|ZP_01130956.1| glutamate racemase [marine actinobacterium PHSC20C1]
gi|88814381|gb|EAR24244.1| glutamate racemase [marine actinobacterium PHSC20C1]
Length = 288
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P +YV D + PYG +++ + + ++D
Sbjct: 16 IGVFDSGVGGLTVARAIIDQLPHESIVYVGDTLHSPYGPKPIADVRRYALEVMDRLVDDG 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L VIACNTA + + R + + V PA + A T++ + ++ T T
Sbjct: 76 VKLL-VIACNTASAAMLRDARERYTEAYGIEVVEVIQPATRAAVRQTRNRRVGVIGTEGT 134
Query: 132 LR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
++ R Y ++ + I L + R E+ E+ E +
Sbjct: 135 IKSRAYED----AFAAASDIELFTQA--CPRFVEFVEAGVTTGPEVLAVAEEYLAPLKKA 188
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D +VL CTHYP I + + V + +++ A
Sbjct: 189 EIDTLVLGCTHYPHISAAIQYVMGREVTLVSSAEETA 225
>gi|197693868|gb|ACH71603.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-EKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693794|gb|ACH71566.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693628|gb|ACH71483.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 173 LPEVVILGCTHFPLIAQ 189
>gi|325479835|gb|EGC82920.1| glutamate racemase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 249
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I IFDSG+GGL VL+++ + + Y D + PYG E K+ ++ DI+D
Sbjct: 4 IGIFDSGLGGLTVLREL-IKTNKASYFYFGDTLRVPYGGRE----KEEIISFAEDIVDYL 58
Query: 74 -KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y +IACNT L D L+ + + F+ + + A+ G +L T T+
Sbjct: 59 ENYNIDYYIIACNTISVLATDILKEKY-NKDFI-PITDMGLRASLACDGDFLVLGTKTTV 116
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N I + ++ V++ L +E + E+ +K ++ K+
Sbjct: 117 NSHFYKNNIEK-LKDAKVYEVAATKLVDLIESGT----LDEENLKFYLDDYLQIANEKKI 171
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
I+LACTHYP+I + + + +D
Sbjct: 172 PNIILACTHYPIIRDSIEKRLTYKANIID 200
>gi|197693806|gb|ACH71572.1| glutamate racemase [Helicobacter pylori]
gi|197693808|gb|ACH71573.1| glutamate racemase [Helicobacter pylori]
gi|197693810|gb|ACH71574.1| glutamate racemase [Helicobacter pylori]
gi|197693812|gb|ACH71575.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693816|gb|ACH71577.1| glutamate racemase [Helicobacter pylori]
gi|197693818|gb|ACH71578.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693568|gb|ACH71453.1| glutamate racemase [Helicobacter pylori]
gi|197693714|gb|ACH71526.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693708|gb|ACH71523.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L V+ACNTA L +E++ S P + + ++ AIKQ + ++ +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNTPIL-VLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|237740830|ref|ZP_04571311.1| glutamate racemase [Fusobacterium sp. 4_1_13]
gi|229431127|gb|EEO41339.1| glutamate racemase [Fusobacterium sp. 4_1_13]
Length = 257
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 10/220 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ +R P+ IY AD FPYG LK + +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIKKSVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI---LST 128
L+K + V+A N + D++++ +G P +K + + I +
Sbjct: 61 LEKGASFI-VLASNAPSITVLDKIKN---KNKVIGIYPPLKNVLNDRRKNTLIIGAKVMI 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
++ + Y + Y Q H+ S +I ++ + E I+ I+ C E +
Sbjct: 117 ESSELQDYIKKEVGDYCKQFHVENASPLIQLIESGDFINNTEETEKTIRNFIDNC--ENK 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ D I L+ TH P I F+++ P V D +D++ +
Sbjct: 175 FGKLDSITLSSTHLPWISSYFKKIIP-EVKLYDPADNLVK 213
>gi|197693832|gb|ACH71585.1| glutamate racemase [Helicobacter pylori]
gi|197693834|gb|ACH71586.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI H
Sbjct: 173 LPEVIILGCTHFPLIAH 189
>gi|91070144|gb|ABE11066.1| putative aspartate and glutamate racemases:glutamate racemase
[uncultured Prochlorococcus marinus clone HF10-11A3]
Length = 264
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 25/257 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN---WEDHALKKRLMFLFSDIL 72
I IFDSGIGG +L + + Y+AD P+G+ E + K + F+
Sbjct: 5 IGIFDSGIGGFTILNSLLKTRKDVEVFYLADTKRIPFGSKNFKEIRLIAKEICNFFA--- 61
Query: 73 DKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
DK L ++ACNT A +++D L+ P + +V I +I +L+T
Sbjct: 62 DKNLDAL-LVACNTTNACALDILEDNLK--IPCFDLINSVSGI------VDKKIIGVLAT 112
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+R +Y I+S I S +E+ + K + + I
Sbjct: 113 QATVRSSYYKKAINSKKENTKIFQQECPEFVSEIEKEKLNLH-KLNYLSDLYLRPLI--- 168
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR--ARCLLPRINTHQTRVFD 246
K + ++L C+HYPLI R+ + +D S ++ ++ + + +++ ++
Sbjct: 169 NKNIEELILGCSHYPLIYDFLRKKLDSNIKIIDPSVALVKKFNESFAIQKTYCYESLSYE 228
Query: 247 DHALFLSGKPDIAMRRL 263
+ F++ + D+ +++
Sbjct: 229 NVEFFVTSEKDVFFKKV 245
>gi|317012362|gb|ADU82970.1| glutamate racemase [Helicobacter pylori Lithuania75]
Length = 255
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALKEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 173 LPEVVILGCTHFPLIAQ 189
>gi|197693758|gb|ACH71548.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|315093634|gb|EFT65610.1| glutamate racemase [Propionibacterium acnes HL060PA1]
Length = 284
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 112/273 (41%), Gaps = 36/273 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG + A +R D
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGE-KTIADVRRYALQCLDR 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+ +
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEEGITSGPELEAIAREYLAPIQEAD----- 182
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 183 -------------CDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESG 229
Query: 239 THQTRVFDDHALFLSG----KPDIAMRRLMQGF 267
+ + FL+ + + RRLM+GF
Sbjct: 230 LLHSHPRESSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|237739926|ref|ZP_04570407.1| asp/Glu racemase [Fusobacterium sp. 2_1_31]
gi|229423534|gb|EEO38581.1| asp/Glu racemase [Fusobacterium sp. 2_1_31]
Length = 263
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 10/225 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+K+ +I +FD+G+G +++ ++ P+ IY AD FPYG L K ++
Sbjct: 5 EKMNKAIAVFDAGLGSYAIVEAIKKAYPKQDIIYFADRKSFPYGTKTTDEL-KTIIEDSV 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI---L 126
D L K V+A N + D++++ +G P +K + + I +
Sbjct: 64 DFLLKKGASFIVLASNAPSITVLDKIKN---KDNVIGIYPPLKNVINDKKKNTLIIGAKV 120
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+ + Y + + Q H+ S +I ++ I+ E+ IK I+ C E
Sbjct: 121 MIDSFELQEYIKKEVGDFQKQFHVENASPLIQLIESGDFINNIEKTENTIKNFIKTCE-E 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
K GK D I L+ TH P + F+++ P D +DS+ + +
Sbjct: 180 KYGK-LDSITLSSTHLPWLSSYFQKIIP-EAKLYDPADSLVKAIK 222
>gi|197693572|gb|ACH71455.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPW 215
+VI+L CTH+PLI RQ+ +
Sbjct: 170 LEILPEVIILGCTHFPLIA---RQIEGY 194
>gi|1709187|sp|P52974|MURI_STAHA RecName: Full=Glutamate racemase
gi|520574|gb|AAA20474.1| glutamate racemase [Staphylococcus haemolyticus]
gi|1093233|prf||2103194B Glu racemase
Length = 266
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 9/246 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ L + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGDEVKQFTTQLANKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ ++ + VIACNTA + + L+ P + +G + P + A T++ + IL T
Sbjct: 61 M-QFDIKMLVIACNTATAVALEHLQQMLP-IPVIGVIEPGSRTAIMTTKNQNVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189
T++ + I H+ VE+ ++ + I I +
Sbjct: 119 TIKSEAYRHHIKHINPNVHVLWCGLPGFVPLVEQ----MRYDDPTITSIVIHQTLKQWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
D I+L CTHYPL+ + + AR LL N H + +H
Sbjct: 175 TDADTIILGCTHYPLLYKPINDYFGGEKKVISSGLETAREVSALLTFSNEHASYTQHPEH 234
Query: 249 ALFLSG 254
F +G
Sbjct: 235 RFFATG 240
>gi|197693612|gb|ACH71475.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 173 LPEVVILGCTHFPLIAQ 189
>gi|109947429|ref|YP_664657.1| glutamate racemase [Helicobacter acinonychis str. Sheeba]
gi|123066226|sp|Q17XG8|MURI_HELAH RecName: Full=Glutamate racemase
gi|109714650|emb|CAJ99658.1| murI [Helicobacter acinonychis str. Sheeba]
Length = 255
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D A K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDSATIKQFSLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L + ++ S P + + ++ AIKQ + ++ +L T AT+
Sbjct: 62 EIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKDKNTPIL-VLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
R + N + Y++ H+ ++ + +EE + E E+ + +
Sbjct: 121 RSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NVLEGELLETCMRYYFAPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 FPEVIILGCTHFPLIAQ 189
>gi|197693706|gb|ACH71522.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693634|gb|ACH71486.1| glutamate racemase [Helicobacter pylori]
gi|197693636|gb|ACH71487.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 173 LPEVVILGCTHFPLIAQ 189
>gi|28378862|ref|NP_785754.1| glutamate racemase [Lactobacillus plantarum WCFS1]
gi|254557068|ref|YP_003063485.1| glutamate racemase [Lactobacillus plantarum JDM1]
gi|38258032|sp|Q88V19|MURI_LACPL RecName: Full=Glutamate racemase
gi|28271699|emb|CAD64605.1| glutamate racemase [Lactobacillus plantarum WCFS1]
gi|254045995|gb|ACT62788.1| glutamate racemase [Lactobacillus plantarum JDM1]
Length = 273
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 29/258 (11%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+++I DSG+GGL V+++ +P ++ D PYG ++ F +D L
Sbjct: 4 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRT-FSFQMADFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
Q + VIACNTA LR S+ +G + P + A + I +++T T
Sbjct: 63 MAKQIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 121
Query: 132 LRRT------YTSNLIHSYVSQC---HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+R T + + VSQ + LV S S V + +K ++KK+
Sbjct: 122 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVAKRVVAETLK--QLKKQ--- 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NT 239
D +VL CTHYPL+ + + + V +D+ +L + N
Sbjct: 177 --------DVDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIAND 228
Query: 240 HQTRVFDDHALFLSGKPD 257
T+ + D + +G D
Sbjct: 229 RSTKRYPDE-YYTTGAAD 245
>gi|294782987|ref|ZP_06748311.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
gi|294479865|gb|EFG27642.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
Length = 257
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 14/225 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I +FD+G+G +++ ++ P+ IY AD FPYG L K ++ D
Sbjct: 1 MNKAIAVFDAGLGSYAIVEAIKKTYPQQDIIYFADRKSFPYGTKTTDEL-KTIIEDSVDF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126
L K V+A N + D++++ +G P +K + + I +
Sbjct: 60 LLKKGASFIVLASNAPSITVLDKIKN---KDNVIGIYPPLKNVIKDKKKNTLIIGAKVMI 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+P + Y + + Q H+ S +I ++ I+ E+ IK I+ C E
Sbjct: 117 DSPEL--QEYIKKEVGDFYKQFHLENASPLIQLIESGDFINNIEKTENTIKNFIKTC--E 172
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
++ + D I L+ TH P + F+++ P D +DS+ + +
Sbjct: 173 EKYGKLDSITLSSTHLPWLSSYFQKIIP-EAKLYDPADSLVKAIK 216
>gi|300768032|ref|ZP_07077938.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|300494381|gb|EFK29543.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
Length = 279
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 29/258 (11%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+++I DSG+GGL V+++ +P ++ D PYG ++ F +D L
Sbjct: 10 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRT-FSFQMADFL 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
Q + VIACNTA LR S+ +G + P + A + I +++T T
Sbjct: 69 MAKQIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 127
Query: 132 LRRT------YTSNLIHSYVSQC---HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+R T + + VSQ + LV S S V + +K ++KK+
Sbjct: 128 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVAKRVVAETLK--QLKKQ--- 182
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NT 239
D +VL CTHYPL+ + + + V +D+ +L + N
Sbjct: 183 --------DVDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIAND 234
Query: 240 HQTRVFDDHALFLSGKPD 257
T+ + D + +G D
Sbjct: 235 RSTKRYPDE-YYTTGAAD 251
>gi|197693552|gb|ACH71445.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 173 LPEVVILGCTHFPLIAQ 189
>gi|197693570|gb|ACH71454.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQHVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|297571671|ref|YP_003697445.1| glutamate racemase [Arcanobacterium haemolyticum DSM 20595]
gi|296932018|gb|ADH92826.1| glutamate racemase [Arcanobacterium haemolyticum DSM 20595]
Length = 282
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 12/218 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL V + + +P YV D PYG +++ + + ++
Sbjct: 10 IGVFDSGIGGLTVARAIIDQLPYESITYVGDTANCPYGPRPIAHVRELALNVMDHLVSTG 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L VIACN+A + + + R + + V PA + A T++ I +++T AT
Sbjct: 70 VKML-VIACNSASSAVLHDARERYTKQLGIPVVEVIRPAARAALHATRNNKIGVIATQAT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-CGIKIKEDEIKKEIEGCFIEKEGK 190
++ + + + V ++ S A R E+A GI + +K E KE
Sbjct: 129 IQSGAYDDAL-AVVPDVNVFSAS----APRFVEFAEAGITTGDLVLKTAREYLEPIKE-S 182
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTHYP + V + V + +++ A+
Sbjct: 183 GVDTLVLGCTHYPFLSGVIGYVMGEGVLLVSSAEETAK 220
>gi|308181062|ref|YP_003925190.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308046553|gb|ADN99096.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 273
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 29/258 (11%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+++I DSG+GGL V+++ +P ++ D PYG ++ F +D L
Sbjct: 4 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRT-FSFQMADFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
Q + VIACNTA LR S+ +G + P + A + I +++T T
Sbjct: 63 IAKQIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 121
Query: 132 LRRT------YTSNLIHSYVSQC---HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+R T + + VSQ + LV S S V + +K ++KK+
Sbjct: 122 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVAKRVVAETLK--QLKKQ--- 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NT 239
D +VL CTHYPL+ + + + V +D+ +L + N
Sbjct: 177 --------DVDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIAND 228
Query: 240 HQTRVFDDHALFLSGKPD 257
T+ + D + +G D
Sbjct: 229 RSTKRYPDE-YYTTGAAD 245
>gi|197693662|gb|ACH71500.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 173 LPEVVILGCTHFPLIAQ 189
>gi|253582420|ref|ZP_04859643.1| glutamate racemase [Fusobacterium varium ATCC 27725]
gi|251835959|gb|EES64497.1| glutamate racemase [Fusobacterium varium ATCC 27725]
Length = 263
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-HALKKRLMFLFS 69
++SI IFDSGIGGL +L+K+R L+P + IY D PY + ED L ++M
Sbjct: 4 ESSIGIFDSGIGGLTILKKIRELLPRENIIYYGDWKNNPYSEKSKEDIQNLSAKIM---- 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILST 128
D L + VI C+ D L+S + ++ +G + +K A ++ I+++ +
Sbjct: 60 DFLIRNNCKAVVIGCSIFSAASLDFLKSQY-NIPIIGMIEGGVKSAILESKQKKIAVMGS 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I ++ +S L + +E+ G + D + EI ++ +
Sbjct: 119 AFTIKSNVYEESIKEIDPNITVYQISCKALCAMLEK---GWENYPDRM--EILESYLCQI 173
Query: 189 GKRTDVIVLACTHYPLIVHVFRQL 212
D ++L THYP I++ R+
Sbjct: 174 PDTADTLILGGTHYPFILNDIRKF 197
>gi|227514545|ref|ZP_03944594.1| glutamate racemase [Lactobacillus fermentum ATCC 14931]
gi|227087102|gb|EEI22414.1| glutamate racemase [Lactobacillus fermentum ATCC 14931]
Length = 268
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 16/258 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V++ ++ +P I+V D FPYG +D A +
Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGT-KDQAEVR 51
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L L K+ + V+ACNTA L++ P + +G + P + A A + G
Sbjct: 52 QLALSIGAFLLKHDVKMMVVACNTATAAALPALQAVLP-IPVIGVIEPGARAALAQDKKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT I + ++ + VE G K E+ E
Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIVEHGQTGTA-KAQEVVSEQL 169
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
F E K +++ CTH+P + + V +D + A+ L +
Sbjct: 170 MTFKEHPVK---TLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226
Query: 242 TRVFDDHALFLSGK-PDI 258
++ L+ +G PD+
Sbjct: 227 NHAHPNYHLYSTGNLPDL 244
>gi|242373382|ref|ZP_04818956.1| glutamate racemase [Staphylococcus epidermidis M23864:W1]
gi|242348745|gb|EES40347.1| glutamate racemase [Staphylococcus epidermidis M23864:W1]
Length = 266
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 105/254 (41%), Gaps = 25/254 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEEVKQFTTEIAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FNIKMLVIACNTATAVALEHLQKLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189
T++ I +++ V+ VE+ ++ + I I +
Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQ----MRYNDPTITSIVIHQTLKQWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPV-DWLDNSDSI-------ARRARCLLPRINTHQ 241
D ++L CTHYPL+ P+ D+ D + ++ AR LL N H
Sbjct: 175 SDADTVILGCTHYPLLYK--------PIYDYFDGTKTVISSGLETAREVSALLTFSNEHA 226
Query: 242 TRV-FDDHALFLSG 254
+ H F +G
Sbjct: 227 SYTEHPKHRFFATG 240
>gi|57168788|ref|ZP_00367919.1| glutamate racemase [Campylobacter coli RM2228]
gi|57019835|gb|EAL56518.1| glutamate racemase [Campylobacter coli RM2228]
Length = 247
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 10/194 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + D K+
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIVKFCLEAL-DFFSKF 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ +IACNTA D LR + FP + A + A ++ I +++T AT++
Sbjct: 62 NIDMLIIACNTASAYALDALRLKADFPIYGVIDAGVEATKKALLDKNKKILVIATKATIQ 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
N + ++ +++ + VEE ++ + ++ +G + D
Sbjct: 122 SKEYQNRLQKQ-GFNNVDALATGLFVPMVEEGIFEGELLQSAMRYYFKGI------ETPD 174
Query: 194 VIVLACTHYPLIVH 207
++LACTH+PL+ +
Sbjct: 175 ALILACTHFPLLAN 188
>gi|197693800|gb|ACH71569.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L V+ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----GILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|317495245|ref|ZP_07953615.1| glutamate racemase [Gemella moribillum M424]
gi|316914667|gb|EFV36143.1| glutamate racemase [Gemella moribillum M424]
Length = 264
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 15/252 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALK---KRLMFL 67
++N+I +FDSG+GGL V +++ +P Y D PYG+ +D +K K + FL
Sbjct: 1 MKNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTKDEIIKNTEKAVEFL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ + + V+ACNTA + L+ + ++ +G V P ++A T++ + +L
Sbjct: 61 INQGVK-----MIVLACNTATAAALEYLQDRY-NLPIIGVVQPGARRAIQATENNNVLVL 114
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T I + S ++ + +E + E +K ++ +
Sbjct: 115 GTQFTADSKVYDKEIKNINSDIVVYDKACPTFCPFIEAEG---NLVEGATQKLLKDVLFD 171
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D +VL CTHYP++ + + + + AR +L Q ++
Sbjct: 172 TKLLDIDTVVLGCTHYPILKKDIEEYYGNNIKVISSGHEAARDVSTVLGYAKLLQKKLNK 231
Query: 247 -DHALFLSGKPD 257
+H F+S + +
Sbjct: 232 TEHKFFISKESE 243
>gi|294785961|ref|ZP_06751248.1| glutamate racemase [Fusobacterium sp. 3_1_27]
gi|294486298|gb|EFG33661.1| glutamate racemase [Fusobacterium sp. 3_1_27]
Length = 256
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 13/224 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ +R P+ IY AD FPYG LK + + +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIEKSVNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K + V+A N + D++++ +G P ++ + + I+
Sbjct: 61 LEKGASFI-VLASNAPSITVLDKIKNN----KVIGIYPPLRDVINDKKKNTL-IIGAKVM 114
Query: 132 LRRTYTSNLIHSYVS----QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
+ + N I V Q H+ SS+I + I+ E IK I+ C E
Sbjct: 115 IESSELQNYIKREVGDSYKQFHVENASSLIQLIESGTFINNIEETEKTIKNFIDNC--EN 172
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ + D I L+ TH P + F ++ P D +DS+ + +
Sbjct: 173 KFGKLDSITLSSTHLPWLSSYFEKIIPQ-TKLYDPADSLVKAIK 215
>gi|313115114|ref|ZP_07800601.1| glutamate racemase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310622554|gb|EFQ06022.1| glutamate racemase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 275
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 28/266 (10%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL-- 60
+DN P I +FDSG+GGL ++++R +P IY D PYG+ +
Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPHEEIIYFGDTGRVPYGSRSPETILQ 52
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117
++ + FL S + + AC T + + P + +LG V A ++AA
Sbjct: 53 YARQDVAFLLSKNVK-----CIMAACGTVSSTYPAAEAAKLP-VPYLGVVDAAAREAAFA 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T++ I ++ T AT+R L+ V I + + VE G +E +
Sbjct: 107 TRNRRIGVIGTAATIRSRSYEKLLRQLVPGVEITAQACPLFVPLVE---AGYVDHSEESR 163
Query: 178 KEIEGCFI-----EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+++ I E D ++L CTHYPL+ + + V +D + + A
Sbjct: 164 QQVTKLVIAQYLTEVREAGVDTLILGCTHYPLLKTMIGEFMGQSVTLVDPAKTAAHHLEQ 223
Query: 233 LLPRINTHQTRVFDDHA-LFLSGKPD 257
+L + + A ++S PD
Sbjct: 224 MLSERGLKAAQEHEGQAHFYVSDVPD 249
>gi|239636354|ref|ZP_04677356.1| glutamate racemase [Staphylococcus warneri L37603]
gi|239597709|gb|EEQ80204.1| glutamate racemase [Staphylococcus warneri L37603]
Length = 265
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 9/246 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNRPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRSGEEVKQFTTEIAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L++ P + +G + P + A T++ + IL T
Sbjct: 61 VE-FDIKMLVIACNTATAVALEHLQNILP-IPVIGVIEPGARTAIMTTKNQNVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189
T++ I ++ ++ VE+ ++ + I I +
Sbjct: 119 TIKSEAYRKHIKRINPNVEVYGIACPGFVPLVEQ----MRYNDPTITSIVIHQTLKQWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 175 SEADTVILGCTHYPLLYQPINDYFGGKKTVISSGLETAREVSALLTFSNEHASYTQHPPH 234
Query: 249 ALFLSG 254
F +G
Sbjct: 235 RFFATG 240
>gi|197693664|gb|ACH71501.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 173 LPEVVILGCTHFPLIAQ 189
>gi|256846771|ref|ZP_05552226.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
gi|256717737|gb|EEU31295.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
Length = 257
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 10/220 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ +R P+ IY AD FPYG LK + +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIKKSVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI---LST 128
L+K + V+A N + D++++ +G P +K + + I +
Sbjct: 61 LEKGASFI-VLASNAPSITVLDKIKN---KNKVIGIYPPLKNVLNDRRKNTLIIGAKVMI 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
++ + Y + Y Q H+ S +I + + E I+ I+ C E +
Sbjct: 117 ESSELQDYIKREVGDYCKQFHVENASPLIQLIESGNFINNTEETEKTIRNFIDNC--ENK 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ D I L+ TH P I F+++ P V D +D++ +
Sbjct: 175 FGKLDSITLSSTHLPWISSYFKKIIP-EVKLYDPADNLVK 213
>gi|227495766|ref|ZP_03926077.1| glutamate racemase [Actinomyces urogenitalis DSM 15434]
gi|226834695|gb|EEH67078.1| glutamate racemase [Actinomyces urogenitalis DSM 15434]
Length = 288
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 36/230 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P +Y+ D PYG +++ + + +++D
Sbjct: 14 IGMFDSGVGGLTVARAVLDQLPGEQVLYIGDTEHSPYGPRPIDEVRELALAVMDELVDSG 73
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L VIACNTA + + R + + V PA + AA T++G I +++T T
Sbjct: 74 VKML-VIACNTASAAVLHDARRRYTLGKGVPVVEVIHPAARAAARVTRNGRIGLIATQGT 132
Query: 132 L-RRTYT------------SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+ R Y S +V + + + SR EEY + ++E +
Sbjct: 133 VDSRAYADALEAVPGVELLSTACPDFVELAERGVTTGPQVMSRAEEYL--LPLREAGV-- 188
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYPL++ + V + +S+ A+
Sbjct: 189 --------------DTLILGCTHYPLLIGPISYVMGEDVTLVTSSEETAK 224
>gi|197693720|gb|ACH71529.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693610|gb|ACH71474.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 170 LKILPEVIILGCTHFPLIAQ 189
>gi|197693638|gb|ACH71488.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 15/195 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L V+ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIKLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLI 205
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLI 187
>gi|197693718|gb|ACH71528.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 173 LPEVVILGCTHFPLIAQ 189
>gi|144898237|emb|CAM75101.1| Asp/Glu racemase [Magnetospirillum gryphiswaldense MSR-1]
Length = 198
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 3/180 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P IY+ D PYG A+ + ++
Sbjct: 9 IGVFDSGVGGLTVLKALRERLPAESLIYLGDTARLPYGTKSAAAVSHYALQAAHALVRMG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L V+A NT+ + LR+ FP + G V P AA + G I +++T +T++
Sbjct: 69 IKAL-VVADNTSSAHALEALRAEFPGLPVTGVVEPGAAAAALASAQGRIVVIATDSTVQA 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTD 193
IH+ + + + S VEE I E + ++ F E KR +
Sbjct: 128 GTYPRAIHNSRPGARVISKACPLFVSMVEEGMTDGPIAEQLARHYLDPLFANADEDKRVN 187
>gi|228476279|ref|ZP_04060981.1| glutamate racemase [Staphylococcus hominis SK119]
gi|314936670|ref|ZP_07844017.1| glutamate racemase [Staphylococcus hominis subsp. hominis C80]
gi|228269682|gb|EEK11184.1| glutamate racemase [Staphylococcus hominis SK119]
gi|313655289|gb|EFS19034.1| glutamate racemase [Staphylococcus hominis subsp. hominis C80]
Length = 265
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 17/250 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K L + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKTFTTQLANKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ P + +G + P + A T++ + IL T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQQLLP-IPVIGVIEPGARTAIMTTKNQKVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I ++ V+ VE+ ++ D+ I I + K
Sbjct: 119 TIKSEAYRHHIKRINPNVEVYGVACPGFVPLVEQ------MRYDD--PTITSIVIHQTLK 170
Query: 191 R-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV- 244
D ++L CTHYPL+ + + AR LL N H +
Sbjct: 171 HWRNTDADTVILGCTHYPLLYKPINDYFGGNKKVISSGLETAREVSALLTFSNEHASYTQ 230
Query: 245 FDDHALFLSG 254
H F +G
Sbjct: 231 HPKHRFFATG 240
>gi|305432470|ref|ZP_07401632.1| glutamate racemase [Campylobacter coli JV20]
gi|304444509|gb|EFM37160.1| glutamate racemase [Campylobacter coli JV20]
Length = 253
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I +FDSG+GGL VL+ + IY D PYG + + K + D
Sbjct: 5 IKMKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIVKFCLEAL-DF 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
K+ + +IACNTA D LR + FP + A + A ++ I +++T
Sbjct: 64 FSKFNIDMLIIACNTASAYALDALRLKADFPIYGVIDAGVEATKKALLDKNKKILVIATK 123
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ N + ++ +++ + VEE ++ + ++ +G
Sbjct: 124 ATIQSKEYQNRLQKQ-GFNNVDALATGLFVPMVEEGIFEGELLQSAMRYYFKGI------ 176
Query: 190 KRTDVIVLACTHYPLIVH 207
+ D ++LACTH+PL+ +
Sbjct: 177 ETPDALILACTHFPLLAN 194
>gi|257791702|ref|YP_003182308.1| glutamate racemase [Eggerthella lenta DSM 2243]
gi|257475599|gb|ACV55919.1| glutamate racemase [Eggerthella lenta DSM 2243]
Length = 303
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 32/222 (14%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ DN P I +FDSG GGL V +++ +P +Y+ D PYG +
Sbjct: 18 RFDNAP--------IGVFDSGFGGLTVAREIAKELPRESIVYLGDSARCPYGPRSLDEVD 69
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
+ + + ++++ L VIACNTA + TFP + +G V P + AA T++
Sbjct: 70 GFVQQIGAWLVERGVK-LVVIACNTATAAGLSHAQRTFP-VPVIGVVEPGARAAAHATKN 127
Query: 121 GLISILSTPATLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-- 177
+ +++T AT+ YT + H V S VE G+++ E I+
Sbjct: 128 RRVGVIATKATVESDAYTKAIRHLDAGIT----VFSTATPRFVEIAEQGLRMAEGPIEDF 183
Query: 178 -------------KEIEGCFIEKEGK-RTDVIVLACTHYPLI 205
+EI ++E + D +VL CTH+PL+
Sbjct: 184 TSLVSTVYIRPAFQEIAREYLEPLRRCDIDTLVLGCTHFPLL 225
>gi|197693858|gb|ACH71598.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L V+ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIKLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|138896233|ref|YP_001126686.1| glutamate racemase [Geobacillus thermodenitrificans NG80-2]
gi|134267746|gb|ABO67941.1| Glutamate racemase [Geobacillus thermodenitrificans NG80-2]
Length = 209
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 7/199 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + VIACNTA ++ DE+R+ + LG V P + A T++G I ++ T
Sbjct: 5 LQQYPLKMLVIACNTATAVVLDEVRAKL-DIPVLGVVHPGARAALKATKNGHIGVIGTVG 63
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + S + H+ ++ VE + ++ + +
Sbjct: 64 TVRSKAYEKALQSINPRVHVESLACPKFVPLVESG----DFEGEKALAIVAESLAPLRPR 119
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
DV++L CTHYPL+ + R+ V + + D AR +L + T + +H
Sbjct: 120 PIDVLILGCTHYPLLAPLIREYMGKKVKLICSGDETAREVSAILHHSHLLYTGGCEPEHL 179
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G ++ + + FG
Sbjct: 180 FFTTGSKELFEKISRKWFG 198
>gi|312796622|ref|YP_004029544.1| glutamate racemase [Burkholderia rhizoxinica HKI 454]
gi|312168397|emb|CBW75400.1| Glutamate racemase (EC 5.1.1.3) [Burkholderia rhizoxinica HKI 454]
Length = 202
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
LR P M +G P IK AA +++ + +L+T +TL+ + L+ Y C +
Sbjct: 2 LRERLP-MPIIGVEPGIKPAALQSRTRVAGVLATASTLKSARFNALLAQYGGDCRFVCQA 60
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
L +E G + + + + C D++VL CTHYP ++ R ++
Sbjct: 61 GHGLVDAIEAGDIGSPV----VMQRLAACLQPILDASADILVLGCTHYPFLLDAVRTITA 116
Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ +D ++IAR+ L+ R+ Q RV
Sbjct: 117 DRLHVIDTGEAIARQ---LVRRLTDQQLRV 143
>gi|1752702|gb|AAC44708.1| Glr [Helicobacter pylori]
Length = 255
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693860|gb|ACH71599.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKRQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|254304280|ref|ZP_04971638.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148324472|gb|EDK89722.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 257
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N I +FD+G+G +++ ++ P+ IY AD FPYG L K ++ D
Sbjct: 1 MNNPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRRSFPYGAKTTEEL-KNIIENSIDF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126
L K ++A N + D+++ +G P +K + + I +
Sbjct: 60 LLKKGASFIILASNAPSITVLDKIKKK---DKVIGIYPPLKDVINDKKKNTLIIGAKVMI 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+P + Y + + Q H+ S +I ++ ++ E IK I+ C E
Sbjct: 117 DSPEL--QEYIKKEVGDFYKQFHVENASPLIQLIESGDFINNVEETEKTIKNFIDNC--E 172
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ + D I L+ TH P + F+++ P D +DS+ + R P I T + +V+
Sbjct: 173 NKFGKLDSITLSSTHLPWLSSYFKKIIPQ-AKLYDPADSLVKAIR---PYITTGEGKVY 227
>gi|197693560|gb|ACH71449.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693550|gb|ACH71444.1| glutamate racemase [Helicobacter pylori]
gi|197693776|gb|ACH71557.1| glutamate racemase [Helicobacter pylori]
gi|197693778|gb|ACH71558.1| glutamate racemase [Helicobacter pylori]
gi|197693780|gb|ACH71559.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFAPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
+VI+L CTH+PLI RQ+ +
Sbjct: 173 LPEVIILGCTHFPLIA---RQIEGY 194
>gi|223043787|ref|ZP_03613830.1| glutamate racemase [Staphylococcus capitis SK14]
gi|222442884|gb|EEE48986.1| glutamate racemase [Staphylococcus capitis SK14]
Length = 266
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 105/254 (41%), Gaps = 25/254 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGDEVKQFTTEIAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L++ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQTLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189
T++ I +++ V+ VE+ ++ + I I +
Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQ----MRYNDPTITSIVIHQTLKQWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPV-DWLDNSDSI-------ARRARCLLPRINTHQ 241
D ++L CTHYPL+ P+ D+ D ++ AR LL N H
Sbjct: 175 SDADTVILGCTHYPLLYK--------PIYDYFDGEKTVISSGLETAREVSALLTFSNEHA 226
Query: 242 TRV-FDDHALFLSG 254
+ H F +G
Sbjct: 227 SYTEHPKHRFFATG 240
>gi|163746582|ref|ZP_02153940.1| glutamate racemase, putative [Oceanibulbus indolifex HEL-45]
gi|161380467|gb|EDQ04878.1| glutamate racemase, putative [Oceanibulbus indolifex HEL-45]
Length = 269
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 52/226 (23%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-----HALKKRLMFL 67
++ IFDSG+GGL V K++ +PE F+Y+AD PYG N +D A +RL
Sbjct: 2 AVGIFDSGLGGLTVWNKVQERLPEVDFVYLADSAHAPYGVRNADDIYNLTCAAVQRLFDA 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG---- 121
D++ ++ACNTA ++ + LG + +A Q G
Sbjct: 62 GCDLV--------ILACNTASAAALRRMQEGWIPREKRVLGVFVPLIEAMTERQWGDNSP 113
Query: 122 -------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG------ 168
+++ +TPAT+ S+ +S + VE ACG
Sbjct: 114 PREVAVNHVALFATPATV------------ASRAFQRELSFRAIGVDVEAQACGGVVDAI 161
Query: 169 ----IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ + E ++ ++ ++++ D +L CTHYPL+ F+
Sbjct: 162 EEGDMILAEALVRSHVDA--LKRKMPNPDAAILGCTHYPLMQEAFQ 205
>gi|326781027|ref|ZP_08240292.1| Glutamate racemase [Streptomyces cf. griseus XylebKG-1]
gi|326661360|gb|EGE46206.1| Glutamate racemase [Streptomyces cf. griseus XylebKG-1]
Length = 256
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L +R L P+ + +D P+G + + + ++P
Sbjct: 1 MDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDITALALDVAR-AAAAHRPD 59
Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT Y
Sbjct: 60 ALIVACNTASVHALPALRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTGSPYQ 117
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + + V LA +E E I + + + +VL
Sbjct: 118 RGLIGDFGGTADVTEVPCPGLADALEHG------DEAGIDRAVAAAAALTP-RDVRAVVL 170
Query: 198 ACTHYPLIVHVFR 210
CTHY L+ R
Sbjct: 171 GCTHYELVAARIR 183
>gi|116493005|ref|YP_804740.1| glutamate racemase [Pediococcus pentosaceus ATCC 25745]
gi|730082|sp|Q08783|MURI_PEDPE RecName: Full=Glutamate racemase
gi|122265531|sp|Q03ES4|MURI_PEDPA RecName: Full=Glutamate racemase
gi|349029|gb|AAA16761.1| glutamate racemase [Pediococcus pentosaceus]
gi|435999|gb|AAC36914.1| glutamate racemase [Pediococcus pentosaceus]
gi|116103155|gb|ABJ68298.1| glutamate racemase [Pediococcus pentosaceus ATCC 25745]
Length = 265
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++ + L+P I++ D+ PYG + +
Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKTAQKLLPNEEIIFIGDEARMPYGPRPTAEVVE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ S ++ K L VIACNTA L++ P +P A T++
Sbjct: 53 FSRQMASFLMTKNIKAL-VIACNTATNAALAVLQAELPIPVIGVILPGAIAANRQTKNQK 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++T T++ S +++ + L + + E A ++ +K +
Sbjct: 112 IGVIATLGTIK----SEAYPKALAEINTKLRAYPVACQEFVEIAEKNELHTTAAQKVMNE 167
Query: 183 CFIEKEGKRTDVIVLACTHYPLI 205
E + D ++L CTH+PL+
Sbjct: 168 KLAEFRQDQIDTLILGCTHFPLL 190
>gi|33435087|gb|AAP39987.2| glutamate racemase [Helicobacter acinonychis]
Length = 255
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FD+G+GG VL+ + IY D PYG +D A K+ D +
Sbjct: 3 IGVFDTGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDSATIKQFSLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L + ++ S P + + ++ AIKQ + ++ +L T AT+
Sbjct: 62 EIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKDKNTPIL-VLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
R + N + Y++ H+ ++ + +EE + E E+ + +
Sbjct: 121 RSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NVLEGELLETCMRYYFAPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 FPEVIILGCTHFPLIAQ 189
>gi|330685733|gb|EGG97369.1| glutamate racemase [Staphylococcus epidermidis VCU121]
Length = 265
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 9/246 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNRPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRSGEEVKQFTTEIAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ P + +G + P + A T++ + IL T
Sbjct: 61 VE-FDIKMLVIACNTATAVALEHLQKILP-IPVIGVIEPGARTAIMTTKNQNVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189
T++ I ++ ++ VE+ ++ + I I +
Sbjct: 119 TIKSEAYRKHIKRINPNVEVYGIACPGFVPLVEQ----MRYNDPTITSIVIHQTLKQWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 175 SEADTVILGCTHYPLLYKPINDYFGGKKTVISSGLETAREVSALLTFSNEHASYTQHPPH 234
Query: 249 ALFLSG 254
F +G
Sbjct: 235 RFFATG 240
>gi|257468491|ref|ZP_05632585.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|317062751|ref|ZP_07927236.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688427|gb|EFS25262.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 263
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-HALKKRLMFLFS 69
++SI IFDSGIGGL +L+K+R L+P + IY D PY + ED L ++M
Sbjct: 4 ESSIGIFDSGIGGLTILKKIRELLPRENIIYYGDWKNNPYSEKSKEDIQNLSAKIM---- 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILST 128
D L + VI C+ D L++ + + +G + +K A ++ I+++ +
Sbjct: 60 DFLIRNNCKAVVIGCSIFSAASLDFLKAQYK-IPIIGMIEGGVKSAILESKQKKIAVMGS 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I + ++ +S L + +E+ G + D I E+ ++ +
Sbjct: 119 AFTIKSNVYEKSIKEINPEITVYQISCKALCTMLEK---GWENYSDRI--EVLESYLCQI 173
Query: 189 GKRTDVIVLACTHYPLIVHVFRQL 212
D ++L THYP I++ ++
Sbjct: 174 PDTADTLILGGTHYPFILNDIKKF 197
>gi|217077581|ref|YP_002335299.1| glutamate racemase [Thermosipho africanus TCF52B]
gi|217037436|gb|ACJ75958.1| glutamate racemase [Thermosipho africanus TCF52B]
Length = 263
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 114/254 (44%), Gaps = 30/254 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG+ VL+K+ ++ H+IY+AD PYG L + +F F++ K
Sbjct: 3 IGLFDSGIGGISVLKKLTYINGA-HYIYIADTERAPYGIKTPEVL-ESFIFEFAEFFHKK 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-LSTPATLRR 134
ACNT ++I + ++ + + + A QA + G+I ++ + +
Sbjct: 61 GVNEIFAACNTTDSIILE--KNLDLGIKYNSIIKAAIQAPKSEKVGVIGTNITVSNGIYK 118
Query: 135 TY---TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
Y + ++ +Q + LV I R+ E + + K
Sbjct: 119 KYLEMENKEVYQKSTQLFVSLVEEGIFYGRMVEAIANY-------------YLLPLKKKN 165
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
+ ++L CTH+P + V ++ P V +D ++ ++++ L + N+ + V +
Sbjct: 166 IEELILGCTHFPFLKGVISRVLP-KVRIIDPAEELSKK----LAKNNSKKAFV----EFY 216
Query: 252 LSGKPDIAMRRLMQ 265
++G P + ++L +
Sbjct: 217 VTGDPKVFEKKLKR 230
>gi|307637232|gb|ADN79682.1| glutamate racemase [Helicobacter pylori 908]
gi|325995823|gb|ADZ51228.1| Glutamate racemase [Helicobacter pylori 2018]
gi|325997417|gb|ADZ49625.1| Glutamate racemase [Helicobacter pylori 2017]
Length = 255
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693712|gb|ACH71525.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|317487823|ref|ZP_07946416.1| Asp/Glu/Hydantoin racemase [Eggerthella sp. 1_3_56FAA]
gi|325830581|ref|ZP_08164002.1| glutamate racemase [Eggerthella sp. HGA1]
gi|316913098|gb|EFV34614.1| Asp/Glu/Hydantoin racemase [Eggerthella sp. 1_3_56FAA]
gi|325487327|gb|EGC89769.1| glutamate racemase [Eggerthella sp. HGA1]
Length = 303
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 32/222 (14%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ DN P I +FDSG GGL V +++ +P +Y+ D PYG +
Sbjct: 18 RFDNAP--------IGVFDSGFGGLTVAREIAKELPRESIVYLGDSARCPYGPRSLDEVD 69
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
+ + + ++++ L VIACNTA + TFP + +G V P + AA T++
Sbjct: 70 GFVQQIGAWLVERGVK-LVVIACNTATAAGLAHAQRTFP-VPVIGVVEPGARAAAHATKN 127
Query: 121 GLISILSTPATLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-- 177
+ +++T AT+ YT + H V S VE G+++ E I+
Sbjct: 128 RRVGVIATKATVESDAYTKAIRHLDAGIT----VFSTATPRFVEIAEQGLRMAEGPIEDF 183
Query: 178 -------------KEIEGCFIEKEGK-RTDVIVLACTHYPLI 205
+EI ++E + D +VL CTH+PL+
Sbjct: 184 TSLVSTVYIRPAFQEIAREYLEPLRRCDIDTLVLGCTHFPLL 225
>gi|197693608|gb|ACH71473.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 173 LPEVVILGCTHFPLIAQ 189
>gi|197693592|gb|ACH71465.1| glutamate racemase [Helicobacter pylori]
gi|197693838|gb|ACH71588.1| glutamate racemase [Helicobacter pylori]
gi|197693840|gb|ACH71589.1| glutamate racemase [Helicobacter pylori]
gi|197693842|gb|ACH71590.1| glutamate racemase [Helicobacter pylori]
gi|197693844|gb|ACH71591.1| glutamate racemase [Helicobacter pylori]
gi|197693846|gb|ACH71592.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693642|gb|ACH71490.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|261838209|gb|ACX97975.1| glutamate racemase [Helicobacter pylori 51]
Length = 255
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
A ++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 AMIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFR-------QLSPWP---------VDWLDNSDSIARRAR 231
+V++L CTH+PLI LS P V++L ++ + A
Sbjct: 170 LEILPEVVILGCTHFPLIAQKIEGYFMEHFALSAPPLLIHSGDAIVEYLHQKYALKKNA- 228
Query: 232 CLLPRINTHQT 242
C P++ H +
Sbjct: 229 CAFPKVEFHAS 239
>gi|16127933|ref|NP_422497.1| glutamate racemase [Caulobacter crescentus CB15]
gi|221236753|ref|YP_002519190.1| glutamate racemase [Caulobacter crescentus NA1000]
gi|13425469|gb|AAK25665.1| glutamate racemase, putative [Caulobacter crescentus CB15]
gi|220965926|gb|ACL97282.1| glutamate racemase [Caulobacter crescentus NA1000]
Length = 289
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 107/282 (37%), Gaps = 41/282 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSDI 71
I +FDSG+GGL V + + +P+ F Y+AD PYG + ED K + LF
Sbjct: 9 IGVFDSGVGGLSVHRALVQRLPQADFTYLADQANAPYGVRSGEDIVELTKAGCIRLF--- 65
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF---------PSMAFLG-AVPAIKQAAAYTQS- 120
+ L V+ACNTA + L+ T+ + LG VP I++A
Sbjct: 66 --ERGASLVVLACNTASAIALRRLQQTWLPDYRKDIGRPVNILGIIVPTIEKATGLPWEH 123
Query: 121 ------------GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168
++ + +T AT+R I + + L +E A
Sbjct: 124 EAERRGEMVQALDILGVFATQATVRSRVYEIEIDKRKQDLAVFSEACPELVPLIEGDASV 183
Query: 169 IKIKEDEIKKEIEG---CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
+ EI K +EG + G+ D +VL CTHY +I +FR P + +
Sbjct: 184 V-----EIAKAVEGHVQALKTRIGRYPDRVVLGCTHYEIIADIFRAALPAGTPLIQQPAA 238
Query: 226 IARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
A L R + +G P L+Q F
Sbjct: 239 TAEGLALYLERHPEYDVGAGGGRVFLTTGTPG-PQNGLVQSF 279
>gi|254462580|ref|ZP_05075996.1| glutamate racemase [Rhodobacterales bacterium HTCC2083]
gi|206679169|gb|EDZ43656.1| glutamate racemase [Rhodobacteraceae bacterium HTCC2083]
Length = 270
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 46/218 (21%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70
++ +FDSG+GGL VL R +P+ F+Y AD PYG + ED KK + +L+++
Sbjct: 2 AVGVFDSGLGGLTVLDAARARLPDVPFVYYADSAHAPYGVRDSEDIYQRTKKAVGYLWAN 61
Query: 71 ILDKYQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG------- 121
D L ++ACNT A L + + LG + +A + G
Sbjct: 62 GCD-----LVILACNTASAAALRRMQEAGVPKGKRVLGVFVPLIEALTEREWGDNSPPRE 116
Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--------- 168
++I +TPAT+ S+ ++ + VE ACG
Sbjct: 117 VAVKEVAIFATPATI------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG 164
Query: 169 -IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
+ + E ++ +E ++++ +L CTHYPL+
Sbjct: 165 DMILAEALVRSHVEA--LKRKMPEPQAAILGCTHYPLM 200
>gi|260428076|ref|ZP_05782055.1| glutamate racemase [Citreicella sp. SE45]
gi|260422568|gb|EEX15819.1| glutamate racemase [Citreicella sp. SE45]
Length = 270
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +PE F+Y AD PYG + + L D L
Sbjct: 2 AVGVFDSGLGGLTVLDAVSKRLPEVPFVYFADSAHAPYGVRDADDIYN-LTTAAVDRLWH 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ T+ LG + +A Q G
Sbjct: 61 AGCDLVILACNTASAAALRRMQETWIPRDKRVLGVFVPLIEAMTERQWGDNSPPREVGVQ 120
Query: 122 LISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+++ +TPAT+R R + L + + + L +EE + + E ++ +
Sbjct: 121 HVALFATPATVRSRAFQRELAFRAIG-VDVEAQACGGLVDAIEE--GDMILAEALVRSHV 177
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
+ ++++ + +L CTHYPL+ +F++
Sbjct: 178 DA--LKRKMPEPEAAILGCTHYPLMEDIFQE 206
>gi|295108801|emb|CBL22754.1| glutamate racemase [Ruminococcus obeum A2-162]
Length = 272
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD--KY 75
+FDSG+GGL V +++ +P +Y D PYG+ K ++ S I+ +
Sbjct: 10 VFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKS----KDTVIRYSSQIVHFLRE 65
Query: 76 QPVLS-VIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133
Q V + VIACNTA + ++ + LG + A + AA T++ + ++ T T+
Sbjct: 66 QNVKAIVIACNTASAFALEAVQDKL-DIPVLGVIEAGARVAAEETKNKRVGVIGTVGTV- 123
Query: 134 RTYTSNLIHSYVSQCHIHLV----SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
S + SY+ + + + + VEE D + E+ ++++ +
Sbjct: 124 ---GSGIHESYLKRLDPEITVIGKACPLFVPLVEEGWL-----HDPVTVEVASRYLQELK 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
++ D ++L CTHYPLI +++ V ++ + A + LL +++ T
Sbjct: 176 DEQVDTLILGCTHYPLIRSTIQEVMGEKVRLVNPAYETALELKSLLTKMDLLST 229
>gi|242310721|ref|ZP_04809876.1| glutamate racemase [Helicobacter pullorum MIT 98-5489]
gi|239523119|gb|EEQ62985.1| glutamate racemase [Helicobacter pullorum MIT 98-5489]
Length = 253
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 19/197 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS----DI 71
I +FDSG+GG+ VL+ + IY D PYG K + +S +
Sbjct: 6 IGVFDSGVGGISVLKSLIDSDSFEEIIYYGDTARVPYG-----VRSKETIIQYSLEALEF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY--TQSGLISILST 128
++ L V+ACNT D ++ F + +G + P + ++ I IL T
Sbjct: 61 FKQFNLDLLVVACNTISAYALDSMQK-FANYPIVGVIEPGVLALTNNLDNKNANILILGT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ NL+H+ +I+ +++ + VEE I E EI + + +
Sbjct: 120 KATINSNLYQNLLHTQ-GYTNINGLATSLFVPIVEE-----GIFEGEILESTMKYYFKDY 173
Query: 189 GKRTDVIVLACTHYPLI 205
+ D I+L CTH+PLI
Sbjct: 174 KESPDAIILGCTHFPLI 190
>gi|318076535|ref|ZP_07983867.1| glutamate racemase [Streptomyces sp. SA3_actF]
Length = 136
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDI-TRLALGAAEAAAAL 61
Query: 76 QPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+P V+ACNTA T LR+ TFP +G VPAIK AAA+ ++I +TPAT
Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFP---VIGTVPAIKPAAAFGAP--VAIWATPAT 116
Query: 132 LRRTYTSNLIHSYVSQCHI 150
Y LI + ++
Sbjct: 117 TGSEYQRRLIAEFAPGGNV 135
>gi|15611563|ref|NP_223214.1| glutamate racemase [Helicobacter pylori J99]
gi|11133705|sp|Q9ZLT0|MURI_HELPJ RecName: Full=Glutamate racemase
gi|151567728|pdb|2JFX|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|151567729|pdb|2JFX|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|151567730|pdb|2JFZ|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|151567731|pdb|2JFZ|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|168177008|pdb|2JFY|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|168177009|pdb|2JFY|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|217035286|pdb|2W4I|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|217035287|pdb|2W4I|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|217035288|pdb|2W4I|E Chain E, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|217035289|pdb|2W4I|F Chain F, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|4155036|gb|AAD06074.1| GLUTAMATE RACEMASE [Helicobacter pylori J99]
Length = 255
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 36/250 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T
Sbjct: 59 KPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----SILEGELLETCMHYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIA---------RRARC 232
+VI+L CTH+PLI P P + + D+I + C
Sbjct: 170 LEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNAC 229
Query: 233 LLPRINTHQT 242
P++ H +
Sbjct: 230 TFPKVEFHAS 239
>gi|197693820|gb|ACH71579.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L V+ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693814|gb|ACH71576.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDS +GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSSVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE G ++ E ++ I E
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKILPE-- 175
Query: 191 RTDVIVLACTHYPLIVH 207
VI+L CTH+PLI
Sbjct: 176 ---VIILGCTHFPLIAQ 189
>gi|30961743|gb|AAP39988.1| glutamate racemase [Helicobacter acinonychis]
Length = 232
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FD+G+GG VL+ + IY D PYG +D A K+ D +
Sbjct: 3 IGVFDTGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDSATIKQFSLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L + ++ S P + + ++ AIKQ + ++ +L T AT+
Sbjct: 62 EIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKDKNTPIL-VLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
R + N + Y++ H+ ++ + +EE + E E+ + +
Sbjct: 121 RSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NVLEGELLETCMRYYFAPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 FPEVIILGCTHFPLIAQ 189
>gi|315658541|ref|ZP_07911413.1| glutamate racemase [Staphylococcus lugdunensis M23590]
gi|315496870|gb|EFU85193.1| glutamate racemase [Staphylococcus lugdunensis M23590]
Length = 269
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 25/256 (9%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I + DSG+GGL V +++ +P Y+ D PYG +K L +
Sbjct: 2 KNMNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDIARCPYGPRPGEEVKAFTTELAN 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
+++ + + VIACNTA + + L+ S+ +G + P + A T++ + IL T
Sbjct: 62 KLME-FDIKMLVIACNTATAVALEHLQHIL-SIPVIGVIEPGARTAIMTTKNQHVLILGT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKIKEDEIK---KEIEGCF 184
T++ S+ + H + + V AC G ++++ I
Sbjct: 120 EGTIK------------SEAYRHHIKRINPNVEVTGVACPGFVPLVEQMRYNDPTITSII 167
Query: 185 IEKEGKR-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
I + K D ++L CTHYPL+ + + AR LL N
Sbjct: 168 IHQTLKHWRNSIADTVILGCTHYPLLYQPLNDYFGGDKTVISSGLETAREVSALLTFSNE 227
Query: 240 HQTRVFD-DHALFLSG 254
H + H F +G
Sbjct: 228 HASYTAQPQHRFFSTG 243
>gi|33433444|gb|AAP39989.2| glutamate racemase [Helicobacter acinonychis]
Length = 255
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FD+G+GG VL+ + + IY D PYG +D A K+ D +
Sbjct: 3 IGVFDTGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDSATIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L + ++ S P + + ++ AIKQ + ++ +L T AT+
Sbjct: 62 EIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKDKNTPIL-VLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFAPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 FPEVIILGCTHFPLIAQ 189
>gi|256832123|ref|YP_003160850.1| glutamate racemase [Jonesia denitrificans DSM 20603]
gi|256685654|gb|ACV08547.1| glutamate racemase [Jonesia denitrificans DSM 20603]
Length = 268
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 14/222 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL V + + +P Y+ D PYG + AL + L D L
Sbjct: 3 DSPIGIFDSGVGGLTVARSILDQLPGESITYIGDTANTPYGP-KPLALVRELALTIMDRL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILST 128
+ VIACNTA + + R + + V PA ++A A T++G I ++ T
Sbjct: 62 VDDGVKMLVIACNTASAAVLRDARERYTVGRGIPVVEVILPAARRAVAATRTGKIGVIGT 121
Query: 129 PATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT+ R Y L S VSS+ VE GI I+ +++
Sbjct: 122 QATVASRAYDDAL-----SVAADLTVSSVACPDFVELVEAGITTGPRVIEAATR--YLDS 174
Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ D ++L CTHYPL+ + V + +++ A+
Sbjct: 175 LKHHDVDTLILGCTHYPLLTGAISYVMGEDVTLVSSAEETAK 216
>gi|197693582|gb|ACH71460.1| glutamate racemase [Helicobacter pylori]
gi|197693602|gb|ACH71470.1| glutamate racemase [Helicobacter pylori]
gi|197693604|gb|ACH71471.1| glutamate racemase [Helicobacter pylori]
gi|197693618|gb|ACH71478.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDETIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNT L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNASILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILESELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|317013968|gb|ADU81404.1| glutamate racemase [Helicobacter pylori Gambia94/24]
Length = 255
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T
Sbjct: 59 KPHEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTP 169
Query: 188 EGKRTDVIVLACTHYPLIVH 207
VI+L CTH+PLI
Sbjct: 170 LKILPKVIILGCTHFPLIAQ 189
>gi|197693640|gb|ACH71489.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 15/195 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMHYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLI 205
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLI 187
>gi|197693578|gb|ACH71458.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFAPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
VI+L CTH+PLI RQ+ +
Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194
>gi|197693546|gb|ACH71442.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|197693590|gb|ACH71464.1| glutamate racemase [Helicobacter pylori]
gi|197693782|gb|ACH71560.1| glutamate racemase [Helicobacter pylori]
gi|197693784|gb|ACH71561.1| glutamate racemase [Helicobacter pylori]
gi|197693786|gb|ACH71562.1| glutamate racemase [Helicobacter pylori]
gi|197693788|gb|ACH71563.1| glutamate racemase [Helicobacter pylori]
gi|197693790|gb|ACH71564.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFAPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
VI+L CTH+PLI RQ+ +
Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194
>gi|256002758|gb|ACU52624.1| glutamate racemase [Bacillus licheniformis]
Length = 250
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 97/224 (43%), Gaps = 7/224 (3%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P+ + IYV D PYG + + + L + +L+ + + VIACNTA + D++
Sbjct: 4 LPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIALDDI 63
Query: 96 RSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
+ + + +G + P + A T + I ++ T T++ + + + ++
Sbjct: 64 QRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVENLA 122
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+L VE K ++ +K + + D ++L CTHYP++ ++
Sbjct: 123 CPLLVPFVESGKFLDKTADEIVKTSL----YPLKDTSIDSLILGCTHYPILKEAIQRYMG 178
Query: 215 WPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSGKPD 257
V+ + + D AR +L +Q+ + DH +G D
Sbjct: 179 EHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQFLTTGARD 222
>gi|332982127|ref|YP_004463568.1| glutamate racemase [Mahella australiensis 50-1 BON]
gi|332699805|gb|AEE96746.1| glutamate racemase [Mahella australiensis 50-1 BON]
Length = 268
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 23/230 (10%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE-DHALK 61
+DN P I +FDSG+GGL V++++ +P +Y D PYG D +K
Sbjct: 1 MDNRP--------IGVFDSGVGGLTVVKEIMKQLPAEDIVYFGDTARVPYGTRSRDTVIK 52
Query: 62 ---KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY- 117
+ + FL S + V+ACNTA + + + F + LG + AA +
Sbjct: 53 FTLQSVRFLMSQGIKAV-----VLACNTASAISLEVAQQQF-DVPILGVIEGGAIAAVHA 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T++ I ++ T T+ I + VEE +I +
Sbjct: 107 TKNKRIGVIGTEGTINSGAYERAIKLLDDSIETFAKPCPLFVPLVEEGLQDSEIAYMAAR 166
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ + F E G D +++ CTHYPL+ + R+ V ++ ++ A
Sbjct: 167 EYLS--FFEDTG--IDTLLMGCTHYPLMANTIRRAVGTGVKLINPAEKTA 212
>gi|197693556|gb|ACH71447.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
VI+L CTH+PLI RQ+ +
Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194
>gi|197693554|gb|ACH71446.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
VI+L CTH+PLI RQ+ +
Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194
>gi|283853806|ref|ZP_06371029.1| glutamate racemase [Desulfovibrio sp. FW1012B]
gi|283570810|gb|EFC18847.1| glutamate racemase [Desulfovibrio sp. FW1012B]
Length = 268
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 20/205 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y D PYG + + + +L K
Sbjct: 9 IGIFDSGVGGLTVARAVMDRLPHESIVYFGDTARVPYGVKSPDTVARYAAQITRFLLAKD 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-------KQAAAYTQSGLISILST 128
+L ++ACNT + P++ L VP I + A A T++ I I++T
Sbjct: 69 VKLL-IVACNTMAAV-------ALPAITALSPVPVIEVIDAGARSALAATRTKRIGIIAT 120
Query: 129 PATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
P+T+ R Y L H + + VEE + + E
Sbjct: 121 PSTIASRAYERALTTLGGPGVHTASRACPLFVPLVEEG----WLDHPATRLVAEEYLAPL 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQL 212
D ++L CTHYPL+ + ++
Sbjct: 177 LAYDLDTLILGCTHYPLLAPLLARV 201
>gi|206901151|ref|YP_002251063.1| glutamate racemase [Dictyoglomus thermophilum H-6-12]
gi|206740254|gb|ACI19312.1| glutamate racemase [Dictyoglomus thermophilum H-6-12]
Length = 266
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRF--LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I I DSG+GGL VL+++ F L E +F+ D FPYG +++R+ + S
Sbjct: 4 IGILDSGVGGLSVLKEVYFNNLADEVYFL--GDTKYFPYGIKPVEFIQERVFEIVS-FFK 60
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAF----LGAVPAIKQAAAYTQSGLISILSTP 129
+ ++ACNTA ++ D L F + LGA+ IK +YT + +L+T
Sbjct: 61 NFGVEEVIVACNTASSVAYDFLVDNFRDIKIHSIVLGAIEGIK---SYTFKK-VGVLATK 116
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T NLIH +S+ V S +E GI ++ + I+KEI C
Sbjct: 117 RTKESNIYPNLIHERISKNVEVYVQSCSEGPLLETIEKGI-VEGEIIEKEIIKCTDPLVE 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSP 214
+ ++L CTH P I V + L P
Sbjct: 176 NGIEGLILGCTHLPFIKGVIKNLYP 200
>gi|81428019|ref|YP_395018.1| glutamate racemase [Lactobacillus sakei subsp. sakei 23K]
gi|123564670|sp|Q38YM1|MURI_LACSS RecName: Full=Glutamate racemase
gi|78609660|emb|CAI54706.1| Glutamate racemase [Lactobacillus sakei subsp. sakei 23K]
Length = 274
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I DSG+GGL ++++ R +P +++ D PYG + A + + ++ L
Sbjct: 6 IGFMDSGVGGLTLVKEARKRLPNEDMVFIGDQARLPYGE-KPAATVREFAWQMANFLRHQ 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA +L++ ++ +G + P A T + + +++T T++
Sbjct: 65 EIKALVIACNTATAAALPDLQAQL-AIPVIGVIKPGSIAALQTTHNRRVGVIATTGTIQS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKR 191
S + + + +++ + +E + ++ ++I + ++ I
Sbjct: 124 AAYSQQMAALNPDVQVTGLAAPQFVTMIEANQRHGQAVQTIVNQILQPLQKSEI------ 177
Query: 192 TDVIVLACTHYPLIVHVFR 210
D +VL CTH+PL+ +
Sbjct: 178 -DTLVLGCTHFPLLTTAIQ 195
>gi|197693802|gb|ACH71570.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE G ++ E ++ I
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLKI----- 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW 215
VI+L CTH+PLI RQ+ +
Sbjct: 173 LPKVIILGCTHFPLIA---RQIEGY 194
>gi|197693722|gb|ACH71530.1| glutamate racemase [Helicobacter pylori]
gi|197693724|gb|ACH71531.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ + +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALNFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTLLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|86739585|ref|YP_479985.1| glutamate racemase [Frankia sp. CcI3]
gi|86566447|gb|ABD10256.1| glutamate racemase [Frankia sp. CcI3]
Length = 300
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P +Y+ D PYG +++ + ++D+
Sbjct: 6 IGVFDSGVGGLTVARAILDQLPHEPLMYLGDTARAPYGPRRIAEVRRYALDALDRLVDEG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134
+L VIACNTA + R + +PA ++AAA T+SG + ++ T AT+ R
Sbjct: 66 VKLL-VIACNTASAACLRDARERYDIPVIEVIMPATRRAAAATRSGRVGVIGTLATIASR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++ + + L + A V+ GI ++ E + D
Sbjct: 125 AYD----DAFTAAAGVELTGAACPAF-VDFVERGITCGR-QLLGLTEAYLAPLQEANVDT 178
Query: 195 IVLACTHYPLIVHVF 209
++L CTHYPL+ V
Sbjct: 179 VILGCTHYPLLTGVI 193
>gi|30961747|gb|AAP39990.1| glutamate racemase [Helicobacter acinonychis]
Length = 232
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FD+G+GG VL+ + + IY D PYG +D A K+ D +
Sbjct: 3 IGVFDTGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGT-KDSATIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L + ++ S P + + ++ AIKQ + ++ +L T AT+
Sbjct: 62 EIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKDKNTPIL-VLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYYFAPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 FPEVIILGCTHFPLIAQ 189
>gi|110680409|ref|YP_683416.1| glutamate racemase, putative [Roseobacter denitrificans OCh 114]
gi|123172245|sp|Q163W3|MURI_ROSDO RecName: Full=Glutamate racemase
gi|109456525|gb|ABG32730.1| glutamate racemase, putative [Roseobacter denitrificans OCh 114]
Length = 269
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 38/220 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
S+ IFDSG+GGL VL ++ +P+ F Y+AD PYG + + + D
Sbjct: 2 SVGIFDSGLGGLTVLDAVQTRLPDMPFAYLADSAHAPYGVRTADDIYDLTCQSVARLFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 GCN-LVILACNTASAAALRRMQESWVPEDKRVLGVFVPLIEAMTERQWGDNSPPREVGVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171
+++ +TPAT+ S+ ++ + VE ACG + +
Sbjct: 121 HVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDMML 168
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
E ++ +E ++++ D +L CTHYPL+ +F++
Sbjct: 169 AEALVRSHVEA--LQRKMPTPDAAILGCTHYPLMQDIFQK 206
>gi|197693726|gb|ACH71532.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T A +
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVLGTKAMI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLEI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|326330807|ref|ZP_08197108.1| glutamate racemase [Nocardioidaceae bacterium Broad-1]
gi|325951337|gb|EGD43376.1| glutamate racemase [Nocardioidaceae bacterium Broad-1]
Length = 285
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL V + + + +YV D PYG +++ + ++++
Sbjct: 24 IGIFDSGFGGLTVARSVIDQLAHESILYVGDTARAPYGPRPIAEVREYALECLDHLVEQG 83
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
L VIACN+A + + R + + + + PA ++A A +++G I ++ T AT
Sbjct: 84 VKAL-VIACNSASAAMLRDARERYKPLPVVEVILPATRRAVAASRTGRIGVICTHATAES 142
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTD 193
+ ++ + H+ L + V G+ E+ + E +++ D
Sbjct: 143 MAYDD---AFAAAPHVSL-HTRACPQFVPFVEAGVTGGEELLAAAHE--YLDPLTSAGVD 196
Query: 194 VIVLACTHYPLIVHVF 209
++L CTHYPL+ V
Sbjct: 197 TLILGCTHYPLLTGVI 212
>gi|138999530|dbj|BAF51348.1| glutamate recemase [Streptococcus mutans]
gi|138999536|dbj|BAF51349.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K ++
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKVKMI- 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118
Query: 140 LIHSYVSQCHIH 151
I Q +
Sbjct: 119 KIRDLSPQMKVR 130
>gi|315080007|gb|EFT51983.1| glutamate racemase [Propionibacterium acnes HL078PA1]
Length = 248
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 32/236 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ + +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDRL 68
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ L +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 69 VAHGVKAL-LIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRR-------------TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
R T T+ +V + S L + EY I+
Sbjct: 128 ARSLSYEDALAAVPGITLTTQACPKFVPFVEDGITSGPELETIAREYLAPIQEA------ 181
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
GC D ++L CTHYPL+ + + V + +S AR + L+
Sbjct: 182 ---GC---------DTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLM 225
>gi|323343637|ref|ZP_08083864.1| glutamate racemase [Prevotella oralis ATCC 33269]
gi|323095456|gb|EFZ38030.1| glutamate racemase [Prevotella oralis ATCC 33269]
Length = 280
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 15/212 (7%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MK+ P I +FDSG GGL +L +R L+P Y ++Y+ D+ PYG+ +
Sbjct: 1 MKLSQVP------GPIGVFDSGYGGLTILHGIRQLLPRYDYMYLGDNARAPYGSRSFDVV 54
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAF-----TLIKDELRSTFPSMAFLGAV-PAIKQA 114
+ + + + L ++ CNTA T+ + +L LG + P +
Sbjct: 55 YEFTRQAVAKLFE-MGCHLVILGCNTASAKALRTIQRQDLPVWDAERRVLGVIRPTAEVI 113
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
T+S + +L+T T+R I + V + +E +
Sbjct: 114 GTLTKSRHVGLLATEGTVRSESYKLEIRKLYPDIKVTGVPCPLWVPIIENNEADSPGADY 173
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
++K I + D I+L CTHYPL++
Sbjct: 174 FVQKSIHQLMTLD--PQIDTIILGCTHYPLLM 203
>gi|197693654|gb|ACH71496.1| glutamate racemase [Helicobacter pylori]
gi|197693656|gb|ACH71497.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 27/203 (13%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + LD +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGL----EALDFF 58
Query: 76 QP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+P L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T
Sbjct: 59 KPHEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTK 117
Query: 130 ATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC---F 184
AT++ N + Y++ H+ ++ + +EE I E E+ +E C +
Sbjct: 118 ATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGEL---LEACMRYY 166
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 167 FTPLKILPEVIILGCTHFPLIAQ 189
>gi|326693298|ref|ZP_08230303.1| glutamate racemase [Leuconostoc argentinum KCTC 3773]
Length = 281
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 4/192 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N I DSG+GGL V++ + +P FI++ D PYG + + +L
Sbjct: 5 NPIGFVDSGVGGLTVVKAAQDQLPHEQFIFIGDTARMPYGPRPVQEVIDYTFQMAQFLLT 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA +L++ P VP AAA T + I +++T T+
Sbjct: 65 VKHIKLLVIACNTATARALPQLQAQLPIPVIGVIVPGATAAAATTGNQKIGVIATQGTVT 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I + + I + E +D + + + + D
Sbjct: 125 SGAYQDEIQAVNADVTIFQQAEPDFVQLAEANLAQAATTKDIVAQHLASL----TAQGID 180
Query: 194 VIVLACTHYPLI 205
+VL CTH+PL+
Sbjct: 181 TLVLGCTHFPLL 192
>gi|329119913|ref|ZP_08248587.1| glutamate racemase [Neisseria bacilliformis ATCC BAA-1200]
gi|327464069|gb|EGF10380.1| glutamate racemase [Neisseria bacilliformis ATCC BAA-1200]
Length = 270
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q + +FDSG+GGL ++ + +P +Y D PYG ++ + +L
Sbjct: 6 QCPVGVFDSGVGGLTNVRALMERLPMESIVYFGDTARVPYGVKSRATIEAFTAQIVGFML 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPAT 131
+ L VIACNT + ++R +M L + + A A T++ I +++T T
Sbjct: 66 EHDVKAL-VIACNTIAAVAGHKVRQMAGNMPVLDVISAGAEAALAATRNNHIGVIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + V+ + VEE ++ ++ ++ +
Sbjct: 125 VNSNAYAREIHRKNPAARVQSVACPLFVPLVEEGWLDHEVTRLTAREYLKPILADT---- 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
D +VL CTHYPL+ + + +P
Sbjct: 181 ADTLVLGCTHYPLLKPLLHREAP 203
>gi|91070263|gb|ABE11182.1| putative aspartate and glutamate racemases:glutamate racemase
[uncultured Prochlorococcus marinus clone HF10-11H7]
Length = 264
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 17/216 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSGIGG +L + + Y+AD P+GN ++ + + +DK
Sbjct: 7 IFDSGIGGFTILNSLLKTRQDVEVFYLADTKRIPFGNKNSKEIRLIAKEICTFFVDKNLD 66
Query: 78 VLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L ++ACNT A +++D L+ P + +V I +I +L+T T+R
Sbjct: 67 AL-LVACNTTNACALDILEDNLK--VPCFDLINSVSEI------VDKRIIGVLATQTTVR 117
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+Y I++ I S +E+ K+ D++ + K +
Sbjct: 118 SSYYKKAINAKKESTIIFQQECPKFVSEIEKE----KLNLDKLNTLSDLYLRPLIIKNIE 173
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
++L C+HYPLI R+ + +D S ++ ++
Sbjct: 174 ELILGCSHYPLIYDFLRKKLDSNIKIIDPSVALIKK 209
>gi|138998767|dbj|BAF51436.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K ++
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKAKMI- 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIK 112
>gi|314933347|ref|ZP_07840712.1| glutamate racemase [Staphylococcus caprae C87]
gi|313653497|gb|EFS17254.1| glutamate racemase [Staphylococcus caprae C87]
Length = 266
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 25/254 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +++ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGDEVRQFTTEIAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQRLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIEGCFIEKEG 189
T++ I +++ V+ VE+ ++ + I I +
Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQ----MRYNDPTITSIVIHQTLKQWRN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPV-DWLDNSDSI-------ARRARCLLPRINTHQ 241
D ++L CTHYPL+ P+ D+ D ++ AR LL N H
Sbjct: 175 SDADTVILGCTHYPLLYK--------PIYDYFDGEKTVISSGLETAREVSALLTFSNEHA 226
Query: 242 TRV-FDDHALFLSG 254
+ H F +G
Sbjct: 227 SYTEHPKHRFFATG 240
>gi|197693648|gb|ACH71493.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
VI+L CTH+PLI
Sbjct: 173 LPKVIILGCTHFPLIAQ 189
>gi|189501895|ref|YP_001957612.1| hypothetical protein Aasi_0473 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497336|gb|ACE05883.1| hypothetical protein Aasi_0473 [Candidatus Amoebophilus asiaticus
5a2]
Length = 260
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 25/203 (12%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N I IFDSG+GGL V + ++ L+P Y+ D PYG ++ + + D+
Sbjct: 1 MHNPIGIFDSGVGGLTVARAIKDLLPNESLYYIGDTANLPYGEKSTEQIQAYVKEI-GDV 59
Query: 72 LDKYQPVLSVIACNTAFT----LIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126
L K + VIAC+TA ++KD + P + + V A ++Q GLI
Sbjct: 60 LLKQGCKVIVIACSTATAAAAEVLKDYIGDHIPVLNVIDPVIAYVRQHYMGKTLGLIGTQ 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T T TY L SQ +I+L +++ +L +E D+ +K I +
Sbjct: 120 YTVNT--TTYVQKL---EASQANINLKCLATPLLVPMIE---------ADQYEKAILQGY 165
Query: 185 IEKEGKRTDV--IVLACTHYPLI 205
+ E TD+ ++L CTHY LI
Sbjct: 166 LS-EPILTDIKGLILGCTHYWLI 187
>gi|239905425|ref|YP_002952164.1| glutamate racemase [Desulfovibrio magneticus RS-1]
gi|239795289|dbj|BAH74278.1| glutamate racemase [Desulfovibrio magneticus RS-1]
Length = 270
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 36/209 (17%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL V + + L+P +Y D PYG + + + +L
Sbjct: 5 NSPIGIFDSGVGGLTVARAVMELLPNEPVVYFGDTARVPYGVKSPDTVARYAAQITRFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK-------QAAAYTQSGLISI 125
+K +L ++ACNT + P++ + VP ++ A A T++ I I
Sbjct: 65 EKNVKLL-IVACNTMAAV-------ALPAITNIAPVPVLEVIDAGAASALAATRTRRIGI 116
Query: 126 LSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEG 182
++TP+T+ + Y L + + +H V+ AC + + E+ +
Sbjct: 117 IATPSTVASQAYEQAL--ARLGGPDVHTVAK----------ACPLFVPLAEEGLTDHPAT 164
Query: 183 CFIEKE------GKRTDVIVLACTHYPLI 205
I E + D ++L CTHYPL+
Sbjct: 165 RLIAAEYLTPLAAENLDTLILGCTHYPLL 193
>gi|195536596|dbj|BAG68021.1| glutamate recemase [Streptococcus mutans]
gi|195536598|dbj|BAG68022.1| glutamate recemase [Streptococcus mutans]
gi|195536600|dbj|BAG68023.1| glutamate recemase [Streptococcus mutans]
gi|195536602|dbj|BAG68024.1| glutamate recemase [Streptococcus mutans]
gi|195536604|dbj|BAG68025.1| glutamate recemase [Streptococcus mutans]
gi|195536606|dbj|BAG68026.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K ++
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKVKMI- 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAIVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIK 112
>gi|310816545|ref|YP_003964509.1| Glutamate racemase [Ketogulonicigenium vulgare Y25]
gi|308755280|gb|ADO43209.1| Glutamate racemase [Ketogulonicigenium vulgare Y25]
Length = 270
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 58/228 (25%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--------NWEDHALKKRLMF 66
++ +FDSG+GGL VL + +P+ +Y D+ PYG N A +K
Sbjct: 2 AVGVFDSGLGGLTVLDAVAKRLPDLPLVYFGDNAHAPYGVRTSDDIYNLTVSATQK---- 57
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
LF + D L ++ACNTA ++ + VP K+ + +
Sbjct: 58 LFDNGCD-----LVILACNTASAAALKRMQENW--------VPEGKRVLG------VFVP 98
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG--- 168
A R + N V+ H+ L ++ +ASR VE ACG
Sbjct: 99 LIEALTERQWGDNTAPREVAVKHVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVV 158
Query: 169 -------IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209
+ + E ++ +E ++++ R D +L CTHYPL+ VF
Sbjct: 159 DAIEEGDLILAEALVRSHVEA--LKRKMPRPDAAILGCTHYPLMEKVF 204
>gi|254510376|ref|ZP_05122443.1| glutamate racemase [Rhodobacteraceae bacterium KLH11]
gi|221534087|gb|EEE37075.1| glutamate racemase [Rhodobacteraceae bacterium KLH11]
Length = 269
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 108/275 (39%), Gaps = 42/275 (15%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y AD PYG + + + D+
Sbjct: 2 AVGIFDSGLGGLTVLNAAQKRLPDVDFLYYADSAHAPYGVRDAEDIYNLTRAAVQGLWDR 61
Query: 75 YQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNT A L + + LG + +A Q G
Sbjct: 62 -GCNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVEVQ 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171
+++ +TPAT+ S+ ++ + VE ACG + +
Sbjct: 121 HVALFATPATVS------------SRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDMIL 168
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
E ++ ++ ++++ +L CTHYPL+ F+Q V D + A
Sbjct: 169 AEALVRGHVDA--LKRKMPEPQAAILGCTHYPLMAETFQQALGPHVKVYSQGDLV---AE 223
Query: 232 CLLPRINTHQTRVFDDHALFL-SGKPDIAMRRLMQ 265
L + H + + +L +GKP + R Q
Sbjct: 224 SLADYLQRHPNMLGEGAGGYLTTGKPGVVTDRATQ 258
>gi|254463861|ref|ZP_05077272.1| glutamate racemase [Rhodobacterales bacterium Y4I]
gi|206684769|gb|EDZ45251.1| glutamate racemase [Rhodobacterales bacterium Y4I]
Length = 269
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 42/221 (19%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ DK
Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVEFLYYGDNAHAPYGVRDAENIYQLTKAAMEDMWDK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L ++ACNTA ++ G +P K+ + + A R
Sbjct: 62 GCD-LVILACNTASAAALRRMQE--------GGLPQGKRVLG------VFVPLIEALTER 106
Query: 135 TYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG----------I 169
+ N V H+ L ++ +ASR VE ACG +
Sbjct: 107 QWGDNSPPREVEVKHVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDM 166
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ E ++ ++ ++++ + +L CTHYPL+ F+
Sbjct: 167 ILAEALVRSHVDA--LKRKMPHPEAAILGCTHYPLMEQTFQ 205
>gi|56696751|ref|YP_167112.1| glutamate racemase [Ruegeria pomeroyi DSS-3]
gi|81558534|sp|Q5LS93|MURI_SILPO RecName: Full=Glutamate racemase
gi|56678488|gb|AAV95154.1| glutamate racemase [Ruegeria pomeroyi DSS-3]
Length = 269
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 38/219 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL+ + +PE F+Y AD PYG + + D+ ++
Sbjct: 2 AVGIFDSGLGGLTVLEAAQKRLPEVEFLYYADSAHAPYGVRTPDDIFQLTRAAVHDLWNR 61
Query: 75 YQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNT A L + + P LG + +A Q G
Sbjct: 62 GCD-LVILACNTASAAALRRMQEEGVPPGKRVLGVFVPLIEALTERQWGDNSPPREVEVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171
+++ +TPAT+ S+ ++ + VE ACG + +
Sbjct: 121 NVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDLIL 168
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
E ++ ++ ++++ +L CTHYPL+ +F+
Sbjct: 169 AEALVRSHVDA--LKRKMPYPQAAILGCTHYPLMEPIFQ 205
>gi|138998500|dbj|BAF51362.1| glutamate recemase [Streptococcus mutans]
gi|138998505|dbj|BAF51363.1| glutamate recemase [Streptococcus mutans]
gi|138998507|dbj|BAF51364.1| glutamate recemase [Streptococcus mutans]
gi|138998509|dbj|BAF51365.1| glutamate recemase [Streptococcus mutans]
gi|138998515|dbj|BAF51366.1| glutamate recemase [Streptococcus mutans]
gi|138998517|dbj|BAF51367.1| glutamate recemase [Streptococcus mutans]
gi|138998519|dbj|BAF51368.1| glutamate recemase [Streptococcus mutans]
gi|138998522|dbj|BAF51369.1| glutamate recemase [Streptococcus mutans]
gi|138998524|dbj|BAF51370.1| glutamate recemase [Streptococcus mutans]
gi|138998529|dbj|BAF51371.1| glutamate recemase [Streptococcus mutans]
gi|138998531|dbj|BAF51372.1| glutamate recemase [Streptococcus mutans]
gi|138998533|dbj|BAF51373.1| glutamate recemase [Streptococcus mutans]
gi|138998536|dbj|BAF51374.1| glutamate recemase [Streptococcus mutans]
gi|138998538|dbj|BAF51375.1| glutamate recemase [Streptococcus mutans]
gi|138998545|dbj|BAF51376.1| glutamate recemase [Streptococcus mutans]
gi|138998547|dbj|BAF51377.1| glutamate recemase [Streptococcus mutans]
gi|138998549|dbj|BAF51378.1| glutamate recemase [Streptococcus mutans]
gi|138998551|dbj|BAF51379.1| glutamate recemase [Streptococcus mutans]
gi|138998557|dbj|BAF51380.1| glutamate recemase [Streptococcus mutans]
gi|138998559|dbj|BAF51381.1| glutamate recemase [Streptococcus mutans]
gi|138998565|dbj|BAF51382.1| glutamate recemase [Streptococcus mutans]
gi|138998567|dbj|BAF51383.1| glutamate recemase [Streptococcus mutans]
gi|138998573|dbj|BAF51384.1| glutamate recemase [Streptococcus mutans]
gi|138998575|dbj|BAF51385.1| glutamate recemase [Streptococcus mutans]
gi|138998579|dbj|BAF51386.1| glutamate recemase [Streptococcus mutans]
gi|138998581|dbj|BAF51387.1| glutamate recemase [Streptococcus mutans]
gi|138998586|dbj|BAF51388.1| glutamate recemase [Streptococcus mutans]
gi|138998588|dbj|BAF51389.1| glutamate recemase [Streptococcus mutans]
gi|138998590|dbj|BAF51390.1| glutamate recemase [Streptococcus mutans]
gi|138998596|dbj|BAF51391.1| glutamate recemase [Streptococcus mutans]
gi|138998599|dbj|BAF51392.1| glutamate recemase [Streptococcus mutans]
gi|138998601|dbj|BAF51393.1| glutamate recemase [Streptococcus mutans]
gi|138998608|dbj|BAF51394.1| glutamate recemase [Streptococcus mutans]
gi|138998610|dbj|BAF51395.1| glutamate recemase [Streptococcus mutans]
gi|138998612|dbj|BAF51396.1| glutamate recemase [Streptococcus mutans]
gi|138998618|dbj|BAF51397.1| glutamate recemase [Streptococcus mutans]
gi|138998620|dbj|BAF51398.1| glutamate recemase [Streptococcus mutans]
gi|138998627|dbj|BAF51399.1| glutamate recemase [Streptococcus mutans]
gi|138998629|dbj|BAF51400.1| glutamate recemase [Streptococcus mutans]
gi|138998631|dbj|BAF51401.1| glutamate recemase [Streptococcus mutans]
gi|138998636|dbj|BAF51402.1| glutamate recemase [Streptococcus mutans]
gi|138998638|dbj|BAF51403.1| glutamate recemase [Streptococcus mutans]
gi|138998640|dbj|BAF51404.1| glutamate recemase [Streptococcus mutans]
gi|138998647|dbj|BAF51405.1| glutamate recemase [Streptococcus mutans]
gi|138998649|dbj|BAF51406.1| glutamate recemase [Streptococcus mutans]
gi|138998654|dbj|BAF51407.1| glutamate recemase [Streptococcus mutans]
gi|138998656|dbj|BAF51408.1| glutamate recemase [Streptococcus mutans]
gi|138998662|dbj|BAF51409.1| glutamate recemase [Streptococcus mutans]
gi|138998664|dbj|BAF51410.1| glutamate recemase [Streptococcus mutans]
gi|138998667|dbj|BAF51411.1| glutamate recemase [Streptococcus mutans]
gi|138998672|dbj|BAF51412.1| glutamate recemase [Streptococcus mutans]
gi|138998678|dbj|BAF51413.1| glutamate recemase [Streptococcus mutans]
gi|138998680|dbj|BAF51414.1| glutamate recemase [Streptococcus mutans]
gi|138998685|dbj|BAF51415.1| glutamate recemase [Streptococcus mutans]
gi|138998690|dbj|BAF51416.1| glutamate recemase [Streptococcus mutans]
gi|138998697|dbj|BAF51417.1| glutamate recemase [Streptococcus mutans NN2025]
gi|138998699|dbj|BAF51418.1| glutamate recemase [Streptococcus mutans]
gi|138998701|dbj|BAF51419.1| glutamate recemase [Streptococcus mutans]
gi|138998704|dbj|BAF51420.1| glutamate recemase [Streptococcus mutans]
gi|138998706|dbj|BAF51421.1| glutamate recemase [Streptococcus mutans]
gi|138998712|dbj|BAF51422.1| glutamate recemase [Streptococcus mutans]
gi|138998714|dbj|BAF51423.1| glutamate recemase [Streptococcus mutans]
gi|138998718|dbj|BAF51424.1| glutamate recemase [Streptococcus mutans]
gi|138998720|dbj|BAF51425.1| glutamate recemase [Streptococcus mutans]
gi|138998726|dbj|BAF51426.1| glutamate recemase [Streptococcus mutans]
gi|138998734|dbj|BAF51427.1| glutamate recemase [Streptococcus mutans]
gi|138998769|dbj|BAF51437.1| glutamate recemase [Streptococcus mutans]
gi|138998771|dbj|BAF51438.1| glutamate recemase [Streptococcus mutans]
gi|138998776|dbj|BAF51439.1| glutamate recemase [Streptococcus mutans]
gi|138998779|dbj|BAF51440.1| glutamate recemase [Streptococcus mutans]
gi|138998781|dbj|BAF51441.1| glutamate recemase [Streptococcus mutans]
gi|138998787|dbj|BAF51442.1| glutamate recemase [Streptococcus mutans]
gi|138998792|dbj|BAF51443.1| glutamate recemase [Streptococcus mutans]
gi|138998794|dbj|BAF51444.1| glutamate recemase [Streptococcus mutans]
gi|138998797|dbj|BAF51445.1| glutamate recemase [Streptococcus mutans]
gi|138998799|dbj|BAF51446.1| glutamate recemase [Streptococcus mutans]
gi|138998803|dbj|BAF51447.1| glutamate recemase [Streptococcus mutans]
gi|138998805|dbj|BAF51448.1| glutamate recemase [Streptococcus mutans]
gi|138999538|dbj|BAF51350.1| glutamate recemase [Streptococcus mutans]
gi|138999544|dbj|BAF51351.1| glutamate recemase [Streptococcus mutans]
gi|138999546|dbj|BAF51352.1| glutamate recemase [Streptococcus mutans]
gi|138999550|dbj|BAF51353.1| glutamate recemase [Streptococcus mutans]
gi|138999552|dbj|BAF51354.1| glutamate recemase [Streptococcus mutans]
gi|138999554|dbj|BAF51355.1| glutamate recemase [Streptococcus mutans]
gi|138999559|dbj|BAF51356.1| glutamate recemase [Streptococcus mutans]
gi|138999565|dbj|BAF51357.1| glutamate recemase [Streptococcus mutans]
gi|138999567|dbj|BAF51358.1| glutamate recemase [Streptococcus mutans]
gi|138999574|dbj|BAF51359.1| glutamate recemase [Streptococcus mutans]
gi|138999576|dbj|BAF51360.1| glutamate recemase [Streptococcus mutans]
gi|138999578|dbj|BAF51361.1| glutamate recemase [Streptococcus mutans]
gi|195536350|dbj|BAG67898.1| glutamate recemase [Streptococcus mutans]
gi|195536352|dbj|BAG67899.1| glutamate recemase [Streptococcus mutans]
gi|195536354|dbj|BAG67900.1| glutamate recemase [Streptococcus mutans]
gi|195536356|dbj|BAG67901.1| glutamate recemase [Streptococcus mutans]
gi|195536358|dbj|BAG67902.1| glutamate recemase [Streptococcus mutans]
gi|195536360|dbj|BAG67903.1| glutamate recemase [Streptococcus mutans]
gi|195536362|dbj|BAG67904.1| glutamate recemase [Streptococcus mutans]
gi|195536364|dbj|BAG67905.1| glutamate recemase [Streptococcus mutans]
gi|195536366|dbj|BAG67906.1| glutamate recemase [Streptococcus mutans]
gi|195536368|dbj|BAG67907.1| glutamate recemase [Streptococcus mutans]
gi|195536370|dbj|BAG67908.1| glutamate recemase [Streptococcus mutans]
gi|195536372|dbj|BAG67909.1| glutamate recemase [Streptococcus mutans]
gi|195536374|dbj|BAG67910.1| glutamate recemase [Streptococcus mutans]
gi|195536376|dbj|BAG67911.1| glutamate recemase [Streptococcus mutans]
gi|195536378|dbj|BAG67912.1| glutamate recemase [Streptococcus mutans]
gi|195536380|dbj|BAG67913.1| glutamate recemase [Streptococcus mutans]
gi|195536382|dbj|BAG67914.1| glutamate recemase [Streptococcus mutans]
gi|195536384|dbj|BAG67915.1| glutamate recemase [Streptococcus mutans]
gi|195536386|dbj|BAG67916.1| glutamate recemase [Streptococcus mutans]
gi|195536388|dbj|BAG67917.1| glutamate recemase [Streptococcus mutans]
gi|195536390|dbj|BAG67918.1| glutamate recemase [Streptococcus mutans]
gi|195536392|dbj|BAG67919.1| glutamate recemase [Streptococcus mutans]
gi|195536394|dbj|BAG67920.1| glutamate recemase [Streptococcus mutans]
gi|195536396|dbj|BAG67921.1| glutamate recemase [Streptococcus mutans]
gi|195536398|dbj|BAG67922.1| glutamate recemase [Streptococcus mutans]
gi|195536400|dbj|BAG67923.1| glutamate recemase [Streptococcus mutans]
gi|195536402|dbj|BAG67924.1| glutamate recemase [Streptococcus mutans]
gi|195536404|dbj|BAG67925.1| glutamate recemase [Streptococcus mutans]
gi|195536406|dbj|BAG67926.1| glutamate recemase [Streptococcus mutans]
gi|195536408|dbj|BAG67927.1| glutamate recemase [Streptococcus mutans]
gi|195536410|dbj|BAG67928.1| glutamate recemase [Streptococcus mutans]
gi|195536412|dbj|BAG67929.1| glutamate recemase [Streptococcus mutans]
gi|195536414|dbj|BAG67930.1| glutamate recemase [Streptococcus mutans]
gi|195536416|dbj|BAG67931.1| glutamate recemase [Streptococcus mutans]
gi|195536418|dbj|BAG67932.1| glutamate recemase [Streptococcus mutans]
gi|195536420|dbj|BAG67933.1| glutamate recemase [Streptococcus mutans]
gi|195536422|dbj|BAG67934.1| glutamate recemase [Streptococcus mutans]
gi|195536424|dbj|BAG67935.1| glutamate recemase [Streptococcus mutans]
gi|195536426|dbj|BAG67936.1| glutamate recemase [Streptococcus mutans]
gi|195536428|dbj|BAG67937.1| glutamate recemase [Streptococcus mutans]
gi|195536430|dbj|BAG67938.1| glutamate recemase [Streptococcus mutans]
gi|195536432|dbj|BAG67939.1| glutamate recemase [Streptococcus mutans]
gi|195536434|dbj|BAG67940.1| glutamate recemase [Streptococcus mutans]
gi|195536436|dbj|BAG67941.1| glutamate recemase [Streptococcus mutans]
gi|195536438|dbj|BAG67942.1| glutamate recemase [Streptococcus mutans]
gi|195536440|dbj|BAG67943.1| glutamate recemase [Streptococcus mutans]
gi|195536442|dbj|BAG67944.1| glutamate recemase [Streptococcus mutans]
gi|195536444|dbj|BAG67945.1| glutamate recemase [Streptococcus mutans]
gi|195536446|dbj|BAG67946.1| glutamate recemase [Streptococcus mutans]
gi|195536448|dbj|BAG67947.1| glutamate recemase [Streptococcus mutans]
gi|195536450|dbj|BAG67948.1| glutamate recemase [Streptococcus mutans]
gi|195536452|dbj|BAG67949.1| glutamate recemase [Streptococcus mutans]
gi|195536454|dbj|BAG67950.1| glutamate recemase [Streptococcus mutans]
gi|195536456|dbj|BAG67951.1| glutamate recemase [Streptococcus mutans]
gi|195536458|dbj|BAG67952.1| glutamate recemase [Streptococcus mutans]
gi|195536460|dbj|BAG67953.1| glutamate recemase [Streptococcus mutans]
gi|195536462|dbj|BAG67954.1| glutamate recemase [Streptococcus mutans]
gi|195536464|dbj|BAG67955.1| glutamate recemase [Streptococcus mutans]
gi|195536466|dbj|BAG67956.1| glutamate recemase [Streptococcus mutans]
gi|195536468|dbj|BAG67957.1| glutamate recemase [Streptococcus mutans]
gi|195536470|dbj|BAG67958.1| glutamate recemase [Streptococcus mutans]
gi|195536472|dbj|BAG67959.1| glutamate recemase [Streptococcus mutans]
gi|195536474|dbj|BAG67960.1| glutamate recemase [Streptococcus mutans]
gi|195536476|dbj|BAG67961.1| glutamate recemase [Streptococcus mutans]
gi|195536478|dbj|BAG67962.1| glutamate recemase [Streptococcus mutans]
gi|195536480|dbj|BAG67963.1| glutamate recemase [Streptococcus mutans]
gi|195536482|dbj|BAG67964.1| glutamate recemase [Streptococcus mutans]
gi|195536484|dbj|BAG67965.1| glutamate recemase [Streptococcus mutans]
gi|195536486|dbj|BAG67966.1| glutamate recemase [Streptococcus mutans]
gi|195536488|dbj|BAG67967.1| glutamate recemase [Streptococcus mutans]
gi|195536490|dbj|BAG67968.1| glutamate recemase [Streptococcus mutans]
gi|195536492|dbj|BAG67969.1| glutamate recemase [Streptococcus mutans]
gi|195536494|dbj|BAG67970.1| glutamate recemase [Streptococcus mutans]
gi|195536496|dbj|BAG67971.1| glutamate recemase [Streptococcus mutans]
gi|195536498|dbj|BAG67972.1| glutamate recemase [Streptococcus mutans]
gi|195536500|dbj|BAG67973.1| glutamate recemase [Streptococcus mutans]
gi|195536502|dbj|BAG67974.1| glutamate recemase [Streptococcus mutans]
gi|195536504|dbj|BAG67975.1| glutamate recemase [Streptococcus mutans]
gi|195536506|dbj|BAG67976.1| glutamate recemase [Streptococcus mutans]
gi|195536508|dbj|BAG67977.1| glutamate recemase [Streptococcus mutans]
gi|195536510|dbj|BAG67978.1| glutamate recemase [Streptococcus mutans]
gi|195536512|dbj|BAG67979.1| glutamate recemase [Streptococcus mutans]
gi|195536514|dbj|BAG67980.1| glutamate recemase [Streptococcus mutans]
gi|195536516|dbj|BAG67981.1| glutamate recemase [Streptococcus mutans]
gi|195536518|dbj|BAG67982.1| glutamate recemase [Streptococcus mutans]
gi|195536520|dbj|BAG67983.1| glutamate recemase [Streptococcus mutans]
gi|195536522|dbj|BAG67984.1| glutamate recemase [Streptococcus mutans]
gi|195536524|dbj|BAG67985.1| glutamate recemase [Streptococcus mutans]
gi|195536526|dbj|BAG67986.1| glutamate recemase [Streptococcus mutans]
gi|195536528|dbj|BAG67987.1| glutamate recemase [Streptococcus mutans]
gi|195536530|dbj|BAG67988.1| glutamate recemase [Streptococcus mutans]
gi|195536532|dbj|BAG67989.1| glutamate recemase [Streptococcus mutans]
gi|195536534|dbj|BAG67990.1| glutamate recemase [Streptococcus mutans]
gi|195536536|dbj|BAG67991.1| glutamate recemase [Streptococcus mutans]
gi|195536538|dbj|BAG67992.1| glutamate recemase [Streptococcus mutans]
gi|195536540|dbj|BAG67993.1| glutamate recemase [Streptococcus mutans]
gi|195536542|dbj|BAG67994.1| glutamate recemase [Streptococcus mutans]
gi|195536544|dbj|BAG67995.1| glutamate recemase [Streptococcus mutans]
gi|195536546|dbj|BAG67996.1| glutamate recemase [Streptococcus mutans]
gi|195536548|dbj|BAG67997.1| glutamate recemase [Streptococcus mutans]
gi|195536550|dbj|BAG67998.1| glutamate recemase [Streptococcus mutans]
gi|195536552|dbj|BAG67999.1| glutamate recemase [Streptococcus mutans]
gi|195536554|dbj|BAG68000.1| glutamate recemase [Streptococcus mutans]
gi|195536556|dbj|BAG68001.1| glutamate recemase [Streptococcus mutans]
gi|195536558|dbj|BAG68002.1| glutamate recemase [Streptococcus mutans]
gi|195536560|dbj|BAG68003.1| glutamate recemase [Streptococcus mutans]
gi|195536562|dbj|BAG68004.1| glutamate recemase [Streptococcus mutans]
gi|195536564|dbj|BAG68005.1| glutamate recemase [Streptococcus mutans]
gi|195536566|dbj|BAG68006.1| glutamate recemase [Streptococcus mutans]
gi|195536568|dbj|BAG68007.1| glutamate recemase [Streptococcus mutans]
gi|195536570|dbj|BAG68008.1| glutamate recemase [Streptococcus mutans]
gi|195536572|dbj|BAG68009.1| glutamate recemase [Streptococcus mutans]
gi|195536574|dbj|BAG68010.1| glutamate recemase [Streptococcus mutans]
gi|195536576|dbj|BAG68011.1| glutamate recemase [Streptococcus mutans]
gi|195536578|dbj|BAG68012.1| glutamate recemase [Streptococcus mutans]
gi|195536580|dbj|BAG68013.1| glutamate recemase [Streptococcus mutans]
gi|195536582|dbj|BAG68014.1| glutamate recemase [Streptococcus mutans]
gi|195536584|dbj|BAG68015.1| glutamate recemase [Streptococcus mutans]
gi|195536586|dbj|BAG68016.1| glutamate recemase [Streptococcus mutans]
gi|195536588|dbj|BAG68017.1| glutamate recemase [Streptococcus mutans]
gi|195536590|dbj|BAG68018.1| glutamate recemase [Streptococcus mutans]
gi|195536592|dbj|BAG68019.1| glutamate recemase [Streptococcus mutans]
gi|195536594|dbj|BAG68020.1| glutamate recemase [Streptococcus mutans]
gi|195536608|dbj|BAG68027.1| glutamate recemase [Streptococcus mutans]
gi|195536610|dbj|BAG68028.1| glutamate recemase [Streptococcus mutans]
gi|195536612|dbj|BAG68029.1| glutamate recemase [Streptococcus mutans]
gi|195536614|dbj|BAG68030.1| glutamate recemase [Streptococcus mutans]
gi|195536616|dbj|BAG68031.1| glutamate recemase [Streptococcus mutans]
gi|195536618|dbj|BAG68032.1| glutamate recemase [Streptococcus mutans]
gi|195536620|dbj|BAG68033.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K ++
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKVKMI- 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIK 112
>gi|138998741|dbj|BAF51429.1| glutamate recemase [Streptococcus mutans]
gi|138998743|dbj|BAF51430.1| glutamate recemase [Streptococcus mutans]
gi|138998746|dbj|BAF51431.1| glutamate recemase [Streptococcus mutans]
gi|138998748|dbj|BAF51432.1| glutamate recemase [Streptococcus mutans]
gi|138998750|dbj|BAF51433.1| glutamate recemase [Streptococcus mutans]
gi|138998761|dbj|BAF51434.1| glutamate recemase [Streptococcus mutans]
gi|138998763|dbj|BAF51435.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K ++
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKRVKMI- 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIK 112
>gi|138998736|dbj|BAF51428.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K ++
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKVKMI- 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIK 112
>gi|299143433|ref|ZP_07036513.1| glutamate racemase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517918|gb|EFI41657.1| glutamate racemase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 278
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 9/190 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL++ ++ + FIY D PYG ++K F + L K
Sbjct: 8 IGVFDSGIGGLSVLKEAINILTDEKFIYFGDTARIPYGIRTPEEIEKFTEESF-EFLKKQ 66
Query: 76 QPVLSVIACNTA--FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+IACNTA + L R FP + + P+ + T++ +++L+T T+
Sbjct: 67 GVKAGIIACNTATCYGLETVSKRFDFPIIGVV--TPSCEAVHKITENKNVALLATQGTVN 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ V L +E I ++ ++K IE E D
Sbjct: 125 SKVYDEHFFDIDPFVDLRSVGCPDLVVAIENG----HIDDEYVEKIIEKYLNEINEFDYD 180
Query: 194 VIVLACTHYP 203
++L CTH+P
Sbjct: 181 TLILGCTHFP 190
>gi|46200986|ref|ZP_00055981.2| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1]
Length = 243
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 4/168 (2%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MP+ +Y+ D PYG + + + +++K L V+ACNTA + D +
Sbjct: 1 MPDEQLLYLGDVARQPYGTKSPRTVTRYAVQAAEFLVEKGIKAL-VVACNTASAVALDAI 59
Query: 96 RSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
FP + LG V A AA + G I + +T T R I + V
Sbjct: 60 EQRFPGLPVLGVVEAGADGAARASPQGRIVVAATEGTCRSEAYERAIARRRGGAQVRCVP 119
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ + EE I E + + F +G D +VL CTH+
Sbjct: 120 CPLFVALAEEGLTDGPIVESVARHYLGSLFDGSQGG--DCLVLGCTHF 165
>gi|167949668|ref|ZP_02536742.1| glutamate racemase [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 275
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
VIACNTA LR ++ +G P +K A +++G++ IL+T TL +L
Sbjct: 28 VIACNTATAAAVASLRQQH-TLPIIGMEPGLKPGIAASRNGVVGILATEGTLGSAKFRDL 86
Query: 141 IHSY-------VSQCH--IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + CH + V S L+ +K+ +EI+ I+ +
Sbjct: 87 LRRHGEGARVIIRPCHGWVRQVESTDLSG-----PRALKVVAEEIQPLID--------QG 133
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D +VL CTH+P + RQ+ P +D ++A+
Sbjct: 134 VDSLVLGCTHFPFLHQAIRQMVPAKTHIIDTGPAVAK 170
>gi|163732003|ref|ZP_02139449.1| glutamate racemase, putative [Roseobacter litoralis Och 149]
gi|161394301|gb|EDQ18624.1| glutamate racemase, putative [Roseobacter litoralis Och 149]
Length = 269
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 38/220 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
S+ IFDSG+GGL VL ++ +P+ F Y+AD PYG + + + D
Sbjct: 2 SVGIFDSGLGGLTVLDAVQTRLPDVSFAYLADSAHAPYGVRTADDIYDLTCRSVARLFDT 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 GCN-LVILACNTASAAALRRMQESWVPDDKRVLGVFVPLIEAMTERQWGDNSPPREVGVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171
+++ +TPAT+ S+ ++ + VE ACG + +
Sbjct: 121 HVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDMML 168
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
E ++ ++ ++++ D +L CTHYPL+ +F++
Sbjct: 169 AEALVRSHVDA--LQRKMPTPDAAILGCTHYPLMQDIFQK 206
>gi|322379012|ref|ZP_08053415.1| glutamate racemase [Helicobacter suis HS1]
gi|322380777|ref|ZP_08054883.1| glutamate racemase [Helicobacter suis HS5]
gi|321146781|gb|EFX41575.1| glutamate racemase [Helicobacter suis HS5]
gi|321148504|gb|EFX43001.1| glutamate racemase [Helicobacter suis HS1]
Length = 260
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 24/202 (11%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+ + H IY D PYG +D A ++ D YQ
Sbjct: 14 VFDSGVGGLSVLESLLKARLFEHIIYYGDTARVPYGP-KDPATIQKFSLEALDFFKPYQI 72
Query: 78 VLSVIACN--TAFTLIKDELRSTFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPATLR 133
+ ++ACN +A+ L + +S P + + G + +K+ +Q I IL T AT+
Sbjct: 73 DMLIVACNSVSAWALPQMRNQSKMPIVGVIEAGVLSVLKKT---SQEQPILILGTKATIA 129
Query: 134 RT-YTSNL-IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEG 189
Y L H Y ++ +++ + +EE + E + +E C + K+
Sbjct: 130 SNRYAKELGAHGYK---NVQSLATGLFVPLIEE-----GVLEGPL---LEACMVHYFKDL 178
Query: 190 K-RTDVIVLACTHYPLIVHVFR 210
K V+VL CTH+P IV +
Sbjct: 179 KCAPSVVVLGCTHFPWIVSSLK 200
>gi|113954148|ref|YP_730755.1| glutamate racemase [Synechococcus sp. CC9311]
gi|113881499|gb|ABI46457.1| glutamate racemase [Synechococcus sp. CC9311]
Length = 263
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSGIGGL VL+++ Y+ D PYG+ ++ + + L Q
Sbjct: 7 LFDSGIGGLTVLRRILERHGAVPVTYLGDTARVPYGSRSPSEIRSIAAEVVA-WLRAQQV 65
Query: 78 VLSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNT L +D E ++ P + +GA AAA + + +L+TPAT+
Sbjct: 66 STVVMACNTTNALARDVTEGQAGVPVVGLIGA------AAALVKESRVGVLATPATV--- 116
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---IKEDEIKKEIEGCFIEKEGKRT 192
S + H ++++ ++ I+ ++ DE+++
Sbjct: 117 -ASGAYRESIEALH---PGTLVVQQACPDFVPLIEAGDLRSDELREAAIRYLQPLLEASV 172
Query: 193 DVIVLACTHY 202
D +VL CTHY
Sbjct: 173 DSVVLGCTHY 182
>gi|99080963|ref|YP_613117.1| glutamate racemase [Ruegeria sp. TM1040]
gi|123077676|sp|Q1GHL1|MURI_SILST RecName: Full=Glutamate racemase
gi|99037243|gb|ABF63855.1| glutamate racemase [Ruegeria sp. TM1040]
Length = 269
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 39/224 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ D+
Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVDFLYYGDNSHAPYGVRDAEDIYELTHKAVHDMWDR 61
Query: 75 YQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNT A L + + LG + +A Q G
Sbjct: 62 -GCNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171
+++ +TPAT+ S+ ++ + VE ACG + +
Sbjct: 121 HVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDMIL 168
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ-LSP 214
E +K ++ ++ R + +L CTHYPL+ VF++ L P
Sbjct: 169 AEALVKSHVDALL--RKMPRPEAAILGCTHYPLMEDVFQKALGP 210
>gi|283953730|ref|ZP_06371261.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 414]
gi|283794771|gb|EFC33509.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 414]
Length = 247
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+ + IY D PYG + + K + + ++
Sbjct: 3 IGVFDSGVGGISVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFKQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Q + +IACNTA D LRS FP + A ++ I +++T AT++
Sbjct: 62 QIDMLIIACNTASAYALDALRSKAHFPIYGVIDAGVKSTIKTLPDKNKEILVIATKATIK 121
Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y L+ +I+ +++ + VEE GI + D ++ +E F K
Sbjct: 122 SEEYQKRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITVP 173
Query: 193 DVIVLACTHYPLI 205
D ++LACTH+PL+
Sbjct: 174 DALILACTHFPLL 186
>gi|197693870|gb|ACH71604.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 15/197 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 121 QSNAYDKALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYYFTPLKI 172
Query: 191 RTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 173 LPEVIILGCTHFPLIAQ 189
>gi|160901642|ref|YP_001567223.1| glutamate racemase [Petrotoga mobilis SJ95]
gi|160359286|gb|ABX30900.1| glutamate racemase [Petrotoga mobilis SJ95]
Length = 263
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 36/231 (15%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL+K+ + + Y+AD++ PYG+ L++ L + S K
Sbjct: 11 IGLFDSGIGGLTVLKKVIENFGNHEYFYLADNLNVPYGSKPIPFLRENLKNILS-FFQKM 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133
+ + ACNT +++K ++ F + + +I A T ++ + +L+T T+
Sbjct: 70 KVDFLISACNTTDSIVK---KTNFDTKNYNFTYVSIIDNAIKTIERNDTVLLLATENTIN 126
Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------EDEIKKEIEGCFI 185
Y LI ++ +EE AC + + + ++ + + ++
Sbjct: 127 LGAYKEALISKKITN--------------LEEKACPLFVPLIEEGYWDGQMAESVLRFYL 172
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--------VDWLDNSDSIAR 228
+ + ++L CTHYP++ R+ + VD+L N + R
Sbjct: 173 QDSKSKYHKVILGCTHYPILEKQIRKYTNSSIVDPADGVVDFLKNEIKLER 223
>gi|159903573|ref|YP_001550917.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9211]
gi|159888749|gb|ABX08963.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9211]
Length = 267
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 11/213 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL+ + + + +Y+AD PYG ++ + L + +
Sbjct: 7 IFDSGVGGLTVLKNVLYRHGDLSAVYLADTARIPYGVKSPLEIQTIALGLVEWLNMQNIS 66
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-RTY 136
VL+V ACNT +L ++ + S+ +G + ++ ++ I +L+TP+T R Y
Sbjct: 67 VLAV-ACNTTDSL-AIKIVKQYSSVPVVGLIDSVGDLVFESR---IGVLATPSTTESRAY 121
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T ++ S + V + V G +I +E + + + I+
Sbjct: 122 TKVIMASNPNA----FVIEQACPAFVPLIETG-QINSNEFQIVAKNYLKPLIDSNVEAII 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
L C+HYPL+ ++L P V +D S ++++
Sbjct: 177 LGCSHYPLLKSRLQELLPKHVRLIDPSIGLSQK 209
>gi|315453056|ref|YP_004073326.1| glutamate racemase [Helicobacter felis ATCC 49179]
gi|315132108|emb|CBY82736.1| glutamate racemase [Helicobacter felis ATCC 49179]
Length = 252
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 24/241 (9%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL VL+ + IY D PYG +D A + + YQ
Sbjct: 5 IFDSGVGGLSVLKSVLQARLFAEIIYYGDTARVPYGP-KDKATIEHFALEALEFFKPYQI 63
Query: 78 VLSVIACNTAFTLIKDELR--STFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPATLR 133
+ ++ACNT L +++R S+ P + + G + I+Q + I +L T AT+
Sbjct: 64 EMLIVACNTVSALALEKMRAHSSIPIVGVIEAGILATIQQFP--NKHTPILVLGTRATIA 121
Query: 134 R-TYTSNL-IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
Y +L H Y ++ +++ + +EE + E + + + E
Sbjct: 122 SGQYAQHLSAHGY---SNVQSLATGLFVPLIEE-----GVLEGALLRACMQHYFENIQNA 173
Query: 192 TDVIVLACTHYPLIV----HVFRQLSPWPVDWLDNSDSIA---RRARCLLPRINTHQTRV 244
V++L CTH+PLI + F+ P + + D+I + L+P + Q R
Sbjct: 174 PTVLILGCTHFPLIASSLQNYFQTRFNHPCALVHSGDAIVHYLQDTHHLIPLNHPPQVRF 233
Query: 245 F 245
F
Sbjct: 234 F 234
>gi|198284544|ref|YP_002220865.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666518|ref|YP_002427212.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198249065|gb|ACH84658.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518731|gb|ACK79317.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 269
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 15/264 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL L +P+ H+++ D PYG+ +++ ++ +
Sbjct: 3 IGIFDSGIGGLSTLLSCLRYLPDAHYLFYGDSAHAPYGDKSPAQVREWTEAAYAWFIAAG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134
+ V+ACNTA + LR + +G PAI++A G + +L+T T+
Sbjct: 63 VDAV-VLACNTATSAAVAPLRERA-DVPIIGIEPAIRKALTEHPQGGVLLLATSITVGGE 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE-IKKEIEGCFIEKEGKRTD 193
+ L Q + ++ LA +E +++ ++ ++ G
Sbjct: 121 KLRNLLNLLENGQERVRPLACSGLAEIIEAQDADWRLRAGRYLQAQVRPARTADIG---- 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPRINTHQTRVFDDHA--- 249
V+VL CTHY I + + +D ++ +AR+ R L I T HA
Sbjct: 177 VVVLGCTHYCWIDDLIHDTLGGDITVVDGNEGVARQLCRRLGVPIRTDTAPPLPRHARIS 236
Query: 250 LFLSGKPDIA---MRRLMQGFGLK 270
L+ + D+ R+L+ G++
Sbjct: 237 LYFTANNDVKSHLARQLLAASGVR 260
>gi|262066069|ref|ZP_06025681.1| putative glutamate racemase [Fusobacterium periodonticum ATCC
33693]
gi|291380163|gb|EFE87681.1| putative glutamate racemase [Fusobacterium periodonticum ATCC
33693]
Length = 257
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 96/225 (42%), Gaps = 14/225 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I +FD+G+G +++ ++ P+ +Y AD FPYG L+ + +
Sbjct: 1 MNKAIAVFDAGLGSYAIVEAIKKAYPQQDILYFADRKSFPYGTKTTEELRDIIENSIDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126
L+K + V+A N + D++++ +G P +K + + I +
Sbjct: 61 LEKGAAFI-VLASNAPSITVLDKIKN---KDNVIGIYPPLKDVIKDKKKNTLIIGAKVMI 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+P + Y + + Q H+ S +I ++ ++ E IK I+ C E
Sbjct: 117 DSPEL--QEYIKKEVGDFYKQFHVENASPLIQLIESGDFINNVEETEKIIKNFIDNC--E 172
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ + D I L+ TH P + F+++ P D SD + + +
Sbjct: 173 NKFGKLDSITLSSTHLPWLSSYFQKIIP-EAKLYDPSDDLVKAIK 216
>gi|319948539|ref|ZP_08022670.1| glutamate racemase [Dietzia cinnamea P4]
gi|319437786|gb|EFV92775.1| glutamate racemase [Dietzia cinnamea P4]
Length = 293
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 97/235 (41%), Gaps = 10/235 (4%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P+ +YV D PYG ++ + + ++D+ L VIACNTA + +
Sbjct: 52 LPDESVVYVGDTAHGPYGPLPLAQVRAHALAVADQLVDRGVKAL-VIACNTASAAMLRDA 110
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R +P PA ++A A T+SG I +++T R T S V+ ++S
Sbjct: 111 RERYPVPVVEVIQPAARRAVATTRSGRIGVIAT----RATVASRAYDDAVAAAAGIELTS 166
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
+ VE GI ++ E D +VL CTHYPL+ V + +
Sbjct: 167 VACPKFVEFVERGITSGR-QVLGLAEAYLAPIRDADVDTLVLGCTHYPLLSGVVQLAAGD 225
Query: 216 PVDWLDNSDSIARRA-RCLLPR--INTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
V + +++ A+ R L + H ++G PD A RR+ F
Sbjct: 226 HVTLVSSAEETAKDVLRVLTAEDLLRPHDPADPPTREYLVTGDPD-AFRRVASRF 279
>gi|84684746|ref|ZP_01012646.1| Glutamate racemase [Maritimibacter alkaliphilus HTCC2654]
gi|84667081|gb|EAQ13551.1| Glutamate racemase [Rhodobacterales bacterium HTCC2654]
Length = 270
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 38/220 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +PE F+Y D+ PYG + + S + D+
Sbjct: 2 AVGIFDSGLGGLTVLDAVTKRLPEVPFVYFGDNAHTPYGVRDADDIYNLTTKAVSRLWDE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ P LG + +A + G
Sbjct: 62 GCD-LVILACNTASAAALRRMQESWIPPDKRVLGVFVPLIEALTERKWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE------ 175
+++ +TPAT+ S+ ++ + VE ACG + E
Sbjct: 121 HVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDMIL 168
Query: 176 ----IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
++ ++ ++++ + +L CTHYP++ VF++
Sbjct: 169 ADALVRSHVDA--LKRKMPNPEAAILGCTHYPIMEDVFQE 206
>gi|184155007|ref|YP_001843347.1| glutamate racemase [Lactobacillus fermentum IFO 3956]
gi|417584|sp|Q03469|MURI_LACFE RecName: Full=Glutamate racemase
gi|229486241|sp|B2GB35|MURI_LACF3 RecName: Full=Glutamate racemase
gi|149549|gb|AAA25241.1| glutamate racemase [Lactobacillus fermentum]
gi|183226351|dbj|BAG26867.1| glutamate racemase [Lactobacillus fermentum IFO 3956]
Length = 268
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 16/258 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V++ ++ +P I+V D FPYG +D A +
Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGT-KDQAEVR 51
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L L K+ + V+ACNTA L++ + +G + P + A A + G
Sbjct: 52 QLALSIGAFLLKHDVKMMVVACNTATAAALPALQAAL-PIPVIGVIEPGARAALAQDKKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT I + ++ + VE G K E+ E
Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIVEHGQTGTA-KAQEVVSEQL 169
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
F E K +++ CTH+P + + V +D + A+ L +
Sbjct: 170 MTFKEHPVK---TLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226
Query: 242 TRVFDDHALFLSGK-PDI 258
++ L+ +G PD+
Sbjct: 227 NHAHPNYHLYSTGNLPDL 244
>gi|261368271|ref|ZP_05981154.1| glutamate racemase [Subdoligranulum variabile DSM 15176]
gi|282569788|gb|EFB75323.1| glutamate racemase [Subdoligranulum variabile DSM 15176]
Length = 271
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 15/222 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLF 68
+ I +FDSG+GGL ++++R ++P +Y D PYG+ + ++ + FL
Sbjct: 3 KRPIGVFDSGLGGLTAVRQLRRVLPGEDIVYFGDTGRVPYGSRARDTIVQYARQDIRFLL 62
Query: 69 SDILDKYQPVLSVI-ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
S Q V +I AC T + E + P A + A A T++ I I+
Sbjct: 63 S------QDVKFIIAACGTVSSTFPPEEAARLPVPYTGVVGAASRAAVAATRNRKIGIIG 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+R + +I + I + + VE G + + + + ++E
Sbjct: 117 TAATIRSGSYAAVIRDMMPDVQITAKACPLFVPLVEN---GYVQDGNPVTQLVISDYLES 173
Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYPL+ + V +D+ A+
Sbjct: 174 VRAAGIDTLILGCTHYPLLKKMIGDYVGESVTLIDSGKVTAQ 215
>gi|289551045|ref|YP_003471949.1| Glutamate racemase [Staphylococcus lugdunensis HKU09-01]
gi|289180577|gb|ADC87822.1| Glutamate racemase [Staphylococcus lugdunensis HKU09-01]
Length = 266
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 102/254 (40%), Gaps = 25/254 (9%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K L + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDIARCPYGPRPGDEVKAFTTELANKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ S+ +G + P + A T++ + IL T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQHIL-SIPVIGVIEPGARTAIMTTKNQHVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKIKEDEIK---KEIEGCFIE 186
T++ S+ + H + + V AC G ++++ I I
Sbjct: 119 TIK------------SEAYRHHIKRINPNVEVTGVACPGFVPLVEQMRYNDPTITSIIIH 166
Query: 187 KEGKR-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ K D ++L CTHYPL+ + + AR LL N H
Sbjct: 167 QTLKHWRNSIADTVILGCTHYPLLYQPLNDYFGGDKTVISSGLETAREVSALLTFSNEHA 226
Query: 242 TRVFD-DHALFLSG 254
+ H F +G
Sbjct: 227 SYTAQPQHRFFSTG 240
>gi|259419026|ref|ZP_05742943.1| glutamate racemase [Silicibacter sp. TrichCH4B]
gi|259345248|gb|EEW57102.1| glutamate racemase [Silicibacter sp. TrichCH4B]
Length = 269
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 39/224 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ D+
Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVDFLYYGDNSHAPYGVRDAEDIYQLTHKAVHDMWDR 61
Query: 75 YQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNT A L + + LG + +A Q G
Sbjct: 62 -GCNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171
+++ +TPAT+ S+ ++ + VE ACG + +
Sbjct: 121 HVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDMIL 168
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ-LSP 214
E +K ++ ++ R + +L CTHYPL+ +F++ L P
Sbjct: 169 AEALVKSHVDALL--RKMPRPEAAILGCTHYPLMEDIFQKALGP 210
>gi|159044309|ref|YP_001533103.1| glutamate racemase [Dinoroseobacter shibae DFL 12]
gi|189030360|sp|A8LMF7|MURI_DINSH RecName: Full=Glutamate racemase
gi|157912069|gb|ABV93502.1| glutamate racemase [Dinoroseobacter shibae DFL 12]
Length = 273
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 38/219 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +PE F+Y D++ PYG + + + S + D+
Sbjct: 2 AVGVFDSGLGGLTVLDAVSRRLPEVPFVYYGDNLHAPYGVRDAEDVYELTTGAVSRLWDE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PS-MAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ PS LG + +A Q G
Sbjct: 62 GCD-LVILACNTASAAALRRMQESWVPSDKRVLGVFVPLIEALTERQWGDNSPPREVAIK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171
+++ +TPAT+ S+ ++ + VE CG + +
Sbjct: 121 HVALFATPATVS------------SRAFQRELAFRAIGVDVEAQPCGGVVDAIEDGDMIL 168
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
E ++ +E +++ + +L CTHYPL+ VF+
Sbjct: 169 AEALVRSHVEA--LKRRMPHPEAAILGCTHYPLMQDVFQ 205
>gi|83942612|ref|ZP_00955073.1| glutamate racemase [Sulfitobacter sp. EE-36]
gi|83953853|ref|ZP_00962574.1| glutamate racemase [Sulfitobacter sp. NAS-14.1]
gi|83841798|gb|EAP80967.1| glutamate racemase [Sulfitobacter sp. NAS-14.1]
gi|83846705|gb|EAP84581.1| glutamate racemase [Sulfitobacter sp. EE-36]
Length = 269
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 58/229 (25%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-----HALKKRLMFL 67
++ IFDSG+GGL V ++ +P+ F+Y+AD PYG N +D A +RL
Sbjct: 2 AVGIFDSGLGGLTVWDAVQAQLPDVDFVYLADSAHAPYGVRNADDIYNLTTAATQRLFDA 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PS-MAFLGAVPAIKQAAAYTQSG---- 121
D++ ++ACNTA ++ + PS LG + +A Q G
Sbjct: 62 GCDLV--------ILACNTASAAALRRMQEGWIPSDKRVLGVFVPLIEAMTERQWGDNSP 113
Query: 122 -------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
+++ +TPAT+ S+ ++ + VE ACG +
Sbjct: 114 PREVDLKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAI 161
Query: 175 EIKKEIEGCFIEKEG---------KRT----DVIVLACTHYPLIVHVFR 210
E +G FI E KR + +L CTHYPL+ F+
Sbjct: 162 E-----DGDFILAEALVRSHVDALKRKMPAPEAAILGCTHYPLMQETFQ 205
>gi|222823123|ref|YP_002574696.1| glutamate racemase [Campylobacter lari RM2100]
gi|222538344|gb|ACM63445.1| glutamate racemase [Campylobacter lari RM2100]
Length = 246
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+ + +IY D PYG + + K + +K
Sbjct: 5 VFDSGVGGLSVLKSLLQAKLFKEYIYYGDTARVPYGVKDKETIIKFSLEALEFFKEKKVD 64
Query: 78 VLSVIACNT----AFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLISILSTPATL 132
+L +IACNT A ++K ++FP + + A V A+K + S ++ +++T AT+
Sbjct: 65 ML-IIACNTVSAHALEILKA--NASFPVLGVIEAGVLAVKNSLEDKNSNIL-VIATQATV 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI--------KEDEIKKEIEGCF 184
H+Y L+ L +VEE A G+ + + D +K E F
Sbjct: 121 DS-------HAYKRA----LIKEGFL--KVEEKATGLFVPMVEEGIFQGDFLKAAFEYYF 167
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
K + ++LACTH+PLI H + + + ++IA
Sbjct: 168 -NKLKFHPNALILACTHFPLIAHSLSEYFGKNTKLIHSGEAIA 209
>gi|84503079|ref|ZP_01001175.1| Glutamate racemase [Oceanicola batsensis HTCC2597]
gi|84388623|gb|EAQ01495.1| Glutamate racemase [Oceanicola batsensis HTCC2597]
Length = 270
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 42/221 (19%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + + D
Sbjct: 2 AVGIFDSGLGGLTVLDAVTKRLPDVPFVYFGDNAHAPYGVRDADDIYDLTTRAVARMFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA ++ ++ VPA K+ + + A R
Sbjct: 62 GCD-LVVLACNTAAAAALRRMQESW--------VPADKRVLG------VFVPLIEALTER 106
Query: 135 TYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG----------I 169
+ N V+ H+ L ++ +ASR VE ACG +
Sbjct: 107 QWGDNSPPREVAVKHVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDM 166
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ E ++ ++ ++++ R + +L CTHYPL+ VF+
Sbjct: 167 ILAEALVRSHVDA--LKRKMPRPEAAILGCTHYPLMDEVFQ 205
>gi|325290677|ref|YP_004266858.1| glutamate racemase [Syntrophobotulus glycolicus DSM 8271]
gi|324966078|gb|ADY56857.1| glutamate racemase [Syntrophobotulus glycolicus DSM 8271]
Length = 304
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 41/244 (16%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDI 71
I +FDSG+GGL V++++ +P+ +Y D PYG+ + + + FL S
Sbjct: 7 IGVFDSGVGGLTVVKQILASIPDARIVYFGDTARAPYGSRSKEEIIAFSSQIIPFLISQG 66
Query: 72 LDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
D + V ACNT A +IK + GA A+K T++G I +L+
Sbjct: 67 AD-----IIVAACNTSSANALPVIKKDFDLPIIGPIESGACLAVK----MTRNGKIGLLA 117
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR------------VEEYACGI------ 169
T RT S H V++ V + S V+ AC +
Sbjct: 118 T----ERTVASEAFHLAVTKVLTKGVRPLAEKSGASGQSGEKPISLVKSQACPLFVPLIE 173
Query: 170 -KIKEDEIKKEIEGCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ + + + I G ++ D I+L CTHYP + L V +D + I
Sbjct: 174 AGLADSDQARNIVGMYLAPLTEAGVDTIILGCTHYPFLNSAITDLVGEKVVLVDPAVEIV 233
Query: 228 RRAR 231
R
Sbjct: 234 SELR 237
>gi|312199600|ref|YP_004019661.1| glutamate racemase [Frankia sp. EuI1c]
gi|311230936|gb|ADP83791.1| glutamate racemase [Frankia sp. EuI1c]
Length = 343
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 6/213 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P +Y D PYG A +RL D L
Sbjct: 6 IGVFDSGVGGLTVARAILDQLPHEPLLYFGDTAHAPYGPRP-IAEVRRLALDAMDTLVAE 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA + R + +PA ++A A T+SG + ++ T AT+
Sbjct: 65 GVKLLVIACNTASAACLRDARERYDVPVVEVVLPAARRAVAATRSGRVGVIGTVATI--- 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
TS V+ ++S+ + V+ G ++ E + D +
Sbjct: 122 -TSRAYDDAVAAAPDVTLTSVSCPAFVDFVERGTTAGR-QLLGLAEAYLAPLQEADVDTL 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+L CTHYPL+ V + V + +++ A+
Sbjct: 180 ILGCTHYPLLTGVIGLVMGESVTLVSSAEETAK 212
>gi|260433846|ref|ZP_05787817.1| glutamate racemase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417674|gb|EEX10933.1| glutamate racemase [Silicibacter lacuscaerulensis ITI-1157]
Length = 269
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 110/279 (39%), Gaps = 50/279 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70
++ IFDSG+GGL VL + +P+ F+Y AD PYG + ED + + + L+S
Sbjct: 2 AVGIFDSGLGGLTVLNAAQTRLPDVDFLYYADSAHAPYGVRDAEDIYNLTRNAVQDLWSR 61
Query: 71 ILDKYQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG------- 121
D L ++ACNT A L + + LG + +A Q G
Sbjct: 62 GCD-----LVILACNTASAAALRRMQEEGVPQGKRVLGVFVPLIEALTERQWGDNSPPRE 116
Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--------- 168
+++ +TPAT+ S+ ++ + VE ACG
Sbjct: 117 VAVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG 164
Query: 169 -IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ + E ++ ++ ++++ +L CTHYPL+ F+ V D +
Sbjct: 165 DMILAEALVRSHVDA--LKRKMPHPQAAILGCTHYPLMAEAFQAALGPDVQVFSQGDLV- 221
Query: 228 RRARCLLPRINTHQTRVFDDHALFL-SGKPDIAMRRLMQ 265
A L + H + A FL +G P R Q
Sbjct: 222 --AESLADYLQRHPGMLGTGEAGFLTTGDPKKVSDRATQ 258
>gi|77463505|ref|YP_353009.1| glutamate racemase [Rhodobacter sphaeroides 2.4.1]
gi|123591864|sp|Q3J276|MURI_RHOS4 RecName: Full=Glutamate racemase
gi|77387923|gb|ABA79108.1| glutamate racemase [Rhodobacter sphaeroides 2.4.1]
Length = 270
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + +D H L+++
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121
D L ++ACNTA ++ T+ LG + +A Q G
Sbjct: 62 GCD-----LVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPRE 116
Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KE 173
+++ +TPAT+ S+ ++ + VE CG + +
Sbjct: 117 VAVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG 164
Query: 174 DEIKKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211
DEI E + +E +R +L CTHYPL+ +F++
Sbjct: 165 DEILAEALVRSHVEALKRRMPHPQAAILGCTHYPLMEPIFQE 206
>gi|313681673|ref|YP_004059411.1| glutamate racemase [Sulfuricurvum kujiense DSM 16994]
gi|313154533|gb|ADR33211.1| glutamate racemase [Sulfuricurvum kujiense DSM 16994]
Length = 248
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 25/256 (9%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V++ + IY D PYG +D R + ++
Sbjct: 5 VFDSGVGGLSVVKSLLEHKLFEEIIYFGDTARVPYG-VKDQNTIIRYSLEALEFFKNFEI 63
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTPATLR 133
L + ACNT DE+R +G V A+K A + ++ IL T AT++
Sbjct: 64 DLLITACNTVSAYALDEMRE-HSHCDVIGVVDPGVLALKNAIPSNDANIL-ILGTKATVK 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S + ++ +++ +L VEE + E E+ + + K D
Sbjct: 122 SGAYEKGLRS-LGYRNLSAIATSLLVPIVEE-----GLYEGEVLQSALHHYFRDLEKTPD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHAL- 250
I+L CTH+PL+ + + ++ ++ + +H T+ FD L
Sbjct: 176 AIILGCTHFPLVARAIDT-------YFEGKSTLIHSGEAIVEYLESHYDFTKRFDTTNLK 228
Query: 251 -FLSGKPDIAMRRLMQ 265
F S P+ +RR+ +
Sbjct: 229 FFASENPE-GLRRVAK 243
>gi|256002760|gb|ACU52625.1| glutamate racemase [Bacillus sp. LL3]
Length = 250
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 11/224 (4%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTL-IKDE 94
+P+ + IYV D PYG + + + + +L+ + + VIACNTA + ++D
Sbjct: 4 LPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYLLENHHIKMLVIACNTATAIALEDI 63
Query: 95 LRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR-RTYTSNLIHSYVSQCHIHL 152
R T + +G + P + A T++ I ++ T T++ R Y L+ + +
Sbjct: 64 QRKT--DIPVVGVIQPGARTAIKVTKNQHIGVIGTINTIKSRAYEQALL-GLNADLQVEN 120
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
++ +L VE + ++ + +E +G D ++L CTHYP++ +
Sbjct: 121 MACPLLVPFVESG----RFLQESAAEAVEASLEPLKGTAIDTLILGCTHYPILKDPIQDY 176
Query: 213 SPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSGK 255
V + + D AR +L +Q++ +H +G+
Sbjct: 177 MGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQFLTTGE 220
>gi|126462361|ref|YP_001043475.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17029]
gi|189030365|sp|A3PK37|MURI_RHOS1 RecName: Full=Glutamate racemase
gi|126104025|gb|ABN76703.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17029]
Length = 270
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + +D H L+++
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121
D L ++ACNTA ++ T+ LG + +A Q G
Sbjct: 62 GCD-----LVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPRE 116
Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KE 173
+++ +TPAT+ S+ ++ + VE CG + +
Sbjct: 117 VAVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG 164
Query: 174 DEIKKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211
DEI E + +E +R +L CTHYPL+ +F++
Sbjct: 165 DEILAEALVRSHVEALKRRMPHPQAAILGCTHYPLMEPIFQE 206
>gi|87124213|ref|ZP_01080062.1| Glutamate racemase [Synechococcus sp. RS9917]
gi|86167785|gb|EAQ69043.1| Glutamate racemase [Synechococcus sp. RS9917]
Length = 262
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+ + +Y+ D PYG+ ++ + + L Q
Sbjct: 7 LFDSGVGGLTVLRSVLHRHGPVPCVYLGDTARVPYGSRAPSEIRSIAAEVVA-WLRSQQV 65
Query: 78 VLSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNT L +D E ++ P + +GA AAA + + +L+TPAT+
Sbjct: 66 STVVMACNTTNALARDVAEGQAGVPVVGLIGA------AAALVRESRVGVLATPATV--- 116
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEK--EGKR 191
S + H S+++ E+ I+ + ++I ++ E
Sbjct: 117 -ASGAYRESIEALHP---GSLVVQQACPEFVPRIEAGDLSSPALRQIAQLYLTPLLEASV 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VI L CTHYPL+ + + L P V +D ++ +AR+ LL
Sbjct: 173 QSVI-LGCTHYPLLQPLLQSLLPPDVRLIDPAEGVARQLDALL 214
>gi|332558385|ref|ZP_08412707.1| glutamate racemase [Rhodobacter sphaeroides WS8N]
gi|332276097|gb|EGJ21412.1| glutamate racemase [Rhodobacter sphaeroides WS8N]
Length = 270
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + +D H L+++
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121
D L ++ACNTA ++ T+ LG + +A Q G
Sbjct: 62 GCD-----LVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPRE 116
Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KE 173
+++ +TPAT+ S+ ++ + VE CG + +
Sbjct: 117 VAVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG 164
Query: 174 DEIKKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211
DEI E + +E +R +L CTHYPL+ +F++
Sbjct: 165 DEILAEALVRSHVEALKRRMPHPQAAILGCTHYPLMEPIFQE 206
>gi|56964421|ref|YP_176152.1| glutamate racemase [Bacillus clausii KSM-K16]
gi|81600804|sp|Q5WEL9|MURI_BACSK RecName: Full=Glutamate racemase
gi|56910664|dbj|BAD65191.1| glutamate racemase [Bacillus clausii KSM-K16]
Length = 276
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 8/210 (3%)
Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85
L V ++ +P+ +Y+ D PYG ++ + +L + ++ VIACN
Sbjct: 15 LTVASEIMRQLPKEPIVYIGDSARCPYGPRPVEEVRAFTWQMIGRLLHEDVKMI-VIACN 73
Query: 86 TAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144
TA ++ +E R+ + +G + P A +++ ++++ T T+ + +HS
Sbjct: 74 TATAVVLEEARAQL-DIPVVGVIRPGAISAIQVSENRHVAVIGTIGTIASNAYTMALHSI 132
Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204
+ ++ + VE+ IK E + + +G D ++L CTHYPL
Sbjct: 133 DENVTVESLACPLFVPLVEQG----TIKGPEAEAVVRESLAPLQGAGFDTLILGCTHYPL 188
Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ V P V + + + AR LL
Sbjct: 189 LKPVIEACLP-SVTVISSGEETAREVSSLL 217
>gi|295692284|ref|YP_003600894.1| glutamate racemase [Lactobacillus crispatus ST1]
gi|295030390|emb|CBL49869.1| Glutamate racemase [Lactobacillus crispatus ST1]
Length = 268
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 115/255 (45%), Gaps = 35/255 (13%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83
V +K+ +P +++ D+ PYG+ + +K + FL LDK ++ + A
Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRTKEEIIELVRKSVQFL----LDKNVKLI-IFA 72
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIH 142
CNTA + +++ +G + + AA+ T++ ++++ST AT + I
Sbjct: 73 CNTATAMAMSTIQAEIDPQ-IIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIR 131
Query: 143 SYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ + +++ LA VE ++ +K+ ++ +GK D +++ C
Sbjct: 132 FRDPEIQVTELAAPKLAPLVEAQKDHETNLKV--------VKESLTPLQGKDFDTLIMGC 183
Query: 200 THYPLIVHVFRQ-LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD------HALFL 252
THYPLI F++ ++ V LD +D +A+ ++ R +F D H +
Sbjct: 184 THYPLIQKEFKEAINDKNVTILDPADQVAQYTFNVMRRDG-----LFSDGNEKVSHEYYT 238
Query: 253 SGKPDIAMRRLMQGF 267
+G P + RL + F
Sbjct: 239 TGDP-TSFDRLARTF 252
>gi|255263591|ref|ZP_05342933.1| glutamate racemase [Thalassiobium sp. R2A62]
gi|255105926|gb|EET48600.1| glutamate racemase [Thalassiobium sp. R2A62]
Length = 269
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 54/244 (22%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70
++ +FDSG+GGL VL + +P+ F+Y AD PYG + ED +K + L+ +
Sbjct: 2 AVGVFDSGLGGLTVLSAVAARLPDVPFVYYADSAHAPYGVRDAEDIFQLTEKAVRHLWDN 61
Query: 71 ILDKYQPVLSVIACNTA-FTLIKDELRSTFP-SMAFLGA-VPAIKQAAAYTQSGL----- 122
D L ++ACNTA ++ + P LG VP I+ A T+
Sbjct: 62 GCD-----LVILACNTASAAALRRMQEAGVPDGKRVLGVFVPLIE---ALTERDWGDNSP 113
Query: 123 --------ISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----- 168
+++ +TPAT+ R + L V VE ACG
Sbjct: 114 PREVDVKHVALFATPATVSSRAFQRELAFRAVG-------------VDVEAQACGGVVDA 160
Query: 169 -----IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
+ + E ++ ++ ++++ D +L CTHYPL+ +F+ V L +
Sbjct: 161 IEEGDMILAEALVRSHVDA--LKRKMPTPDAAILGCTHYPLMQDIFQAALGPDVRVLSQA 218
Query: 224 DSIA 227
D +A
Sbjct: 219 DLVA 222
>gi|332638684|ref|ZP_08417547.1| glutamate racemase [Weissella cibaria KACC 11862]
Length = 281
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I DSGIGGL V+++ +P+ YV D PYG + + +L K
Sbjct: 5 AIGYIDSGIGGLTVVKQALKQIPDEQVYYVGDTARMPYGPRPQEEVLGFTWQMVRYLLKK 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+L V+ACNTA +L++ + +G + P + A + G I +++T T++
Sbjct: 65 DIKML-VVACNTATAAALPDLQAKL-DIPVVGVIQPGVDAALRKSADGEIGVIATAGTVK 122
Query: 134 R-TYTSNLIHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
Y + L+ + + L + + + +Y ++ KE F + +
Sbjct: 123 SLAYYNGLLQGNRAANVVQLAAPEFVDVAENHDYTSEFA---RQVVKEKLSYF---KNHQ 176
Query: 192 TDVIVLACTHYPLIVHVFRQ 211
D ++L CTH+PL+ + ++
Sbjct: 177 VDTLILGCTHFPLMENFIQE 196
>gi|114766197|ref|ZP_01445197.1| Glutamate racemase [Pelagibaca bermudensis HTCC2601]
gi|114541568|gb|EAU44611.1| Glutamate racemase [Roseovarius sp. HTCC2601]
Length = 270
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-----HALKKRLMFL 67
++ +FDSG+GGL VL + +PE F+Y AD PYG + +D A +RL
Sbjct: 2 AVGVFDSGLGGLTVLDAVSKRLPEVPFVYFADSAHAPYGVRDADDIYNLTTAAVERLWEA 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG---- 121
D++ ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 GCDLV--------ILACNTASAAALRRMQESWIPRDKRVLGVFVPLIEAMTERQWGDNSP 113
Query: 122 -------LISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
+++ +TPAT+R R + L + + + L +EE + + E
Sbjct: 114 PREVAVQHVALFATPATVRSRAFQRELAFRAIG-VDVEAQACGGLVDAIEE--GDMILAE 170
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
++ ++ ++++ +L CTHYPL+ F++
Sbjct: 171 ALVRSHVDA--LKRKMPSPQAAILGCTHYPLMQETFQE 206
>gi|237744000|ref|ZP_04574481.1| glutamate racemase [Fusobacterium sp. 7_1]
gi|229433031|gb|EEO43243.1| glutamate racemase [Fusobacterium sp. 7_1]
Length = 257
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 14/225 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ ++ P+ IY AD FPYG LK + D
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTVEQLKTIIKNSI-DF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126
L + V+A N + D++++ + +G P +K + I +
Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKN---NDKIIGIYPPLKDVIKDKMKNTLIIGAKVMI 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+P + Y + ++ Q H+ S +I + I E I+ I C E
Sbjct: 117 ESPEL--QDYIKREVGNFYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--E 172
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ + D I L+ TH P + F+++ P V D +D++ + +
Sbjct: 173 NKFGKLDSITLSSTHLPWLFSYFKKIIP-EVKLYDPADNLVKAIK 216
>gi|254431905|ref|ZP_05045608.1| glutamate racemase [Cyanobium sp. PCC 7001]
gi|197626358|gb|EDY38917.1| glutamate racemase [Cyanobium sp. PCC 7001]
Length = 274
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 25/193 (12%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD--KY 75
+FDSG+GGL VL+K+ L P +Y+ D PYG ++ + ++++ ++
Sbjct: 7 LFDSGLGGLTVLRKVNQLYPHSPCLYLGDTARVPYGTRSPDEIRA----IAAEVVRWLRW 62
Query: 76 QPV-LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q V + ++ACNT+ L D + P + I A+ S + +L+TPAT
Sbjct: 63 QGVGVLLMACNTSNALALDVAVAEAGVPVLGL------IDSVASVISSDRVGVLATPATA 116
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK---EDEIKKEIEGCFIEKEG 189
R +Y H ++++ E+ I+ E+++
Sbjct: 117 RS-------GAYRRAIHASRPDALVIEVGCPEFVPLIEAGHRFSPELRRAALAYIAPLLA 169
Query: 190 KRTDVIVLACTHY 202
D +VL CTHY
Sbjct: 170 AAVDTVVLGCTHY 182
>gi|85703353|ref|ZP_01034457.1| Glutamate racemase [Roseovarius sp. 217]
gi|85672281|gb|EAQ27138.1| Glutamate racemase [Roseovarius sp. 217]
Length = 270
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 38/219 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V + +P+ F+Y+ D+ PYG + + L D L
Sbjct: 2 AVGIFDSGLGGLTVWDAVSKRLPDVPFVYLGDNAHTPYGVRDADDIYD-LTTTSVDRLFA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 61 AGCDLVILACNTASAAALRRMQESWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171
+++ +TPAT+R S+ ++ + VE ACG + +
Sbjct: 121 NVALFATPATVR------------SRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDMIL 168
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
E ++ ++ ++++ + VL CTHYPL+ VF+
Sbjct: 169 AEALVRSHVDA--LKRKMPHPEAAVLGCTHYPLVQEVFQ 205
>gi|303246204|ref|ZP_07332485.1| glutamate racemase [Desulfovibrio fructosovorans JJ]
gi|302492600|gb|EFL52471.1| glutamate racemase [Desulfovibrio fructosovorans JJ]
Length = 297
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 6/199 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y D PYG + + + + +L K
Sbjct: 36 IGIFDSGVGGLTVARAVMDRLPSESIVYFGDTARVPYGVKSPDTVARYAGQITNFLLAKN 95
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134
+L ++ACNT + + + P+ A A T++ I I++TP+T+ R
Sbjct: 96 VKLL-IVACNTMAAVALPAITALSPAPVLEVISAGAASALAATRTKRIGIIATPSTIASR 154
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y S L + + + VEE + + E + D
Sbjct: 155 AYESALAALGGPEVFTASKACPLFVPLVEEG----WLAHPATRLVAEEYLTPLLAENLDT 210
Query: 195 IVLACTHYPLIVHVFRQLS 213
++L CTHYPL+ + +++
Sbjct: 211 LILGCTHYPLLAPLLAEVA 229
>gi|227500398|ref|ZP_03930460.1| possible glutamate racemase [Anaerococcus tetradius ATCC 35098]
gi|227217461|gb|EEI82780.1| possible glutamate racemase [Anaerococcus tetradius ATCC 35098]
Length = 250
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD-- 73
I +FDSG+GGL VL+++ +F Y D + PYG ++ L+ DI+D
Sbjct: 4 IGVFDSGLGGLTVLRELSKTNKAQYF-YFGDTLRVPYGGRS----REELIGFACDIVDFL 58
Query: 74 -KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K+ VIACNT KD L + F+ + + A+ T G +L T T
Sbjct: 59 EKFDIDYYVIACNTLSVTAKDFLVDKYKK-KFI-PITQMGLRASETYGGSFLVLGTKTT- 115
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMIL----ASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
I+S+ + ++ + I+ A+++ ++ + E++ I+
Sbjct: 116 --------INSHFYKNNLEKIPGNIVYEKAATKLVDFIESGNMASSELETYIDSYISLAN 167
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
K I+LACTHYP+I + + +D
Sbjct: 168 EKEIANIILACTHYPIIKSKIENRLTYKANIID 200
>gi|329891275|ref|ZP_08269618.1| glutamate racemase [Brevundimonas diminuta ATCC 11568]
gi|328846576|gb|EGF96140.1| glutamate racemase [Brevundimonas diminuta ATCC 11568]
Length = 287
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 44/247 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL V +++ P FIY+ D PYG + + L + L +
Sbjct: 2 AIGVFDSGVGGLTVHRELTTRFPTRDFIYLGDQAHAPYGGRSGEDIVE-LTRAGCERLFE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSM--------AFLG-AVPAIKQAAAYTQS---- 120
+ V+ACNTA + L+ T+ P M LG VP I+ A S
Sbjct: 61 AGASVVVLACNTASAIALRRLQQTWIPGMREKLGRPVNVLGIIVPTIEAATGLPWSFEAE 120
Query: 121 -------------GLISILSTPAT-LRRTYTSNL------IHSYVSQCHIHLVSSMILAS 160
+ + T AT + R Y + + + C L + L +
Sbjct: 121 RESRMEGEKKQAIDITGVFCTAATAMSRVYEIEIDKRRDDLAVFTEACP-GLAGLIELGA 179
Query: 161 RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWL 220
EE + D +++ I G+ D +L CTHY ++ +F Q P V +
Sbjct: 180 PPEELKVVVDDHVDALRRRI--------GRHPDKAILGCTHYEIVADLFAQALPPGVQVI 231
Query: 221 DNSDSIA 227
++A
Sbjct: 232 SQPAAVA 238
>gi|297562279|ref|YP_003681253.1| glutamate racemase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296846727|gb|ADH68747.1| Glutamate racemase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 261
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 13/194 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG-NWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R P+ D P+G D + + L +
Sbjct: 3 IALVDSGIGMLSTAAALRVARPDADLFLSMDPDHMPWGPRTPDEIVARALAGARAAQEAA 62
Query: 75 YQPVLS--VIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ CNTA ELR+ F P + +G VPAIK AAA I++ ST AT
Sbjct: 63 GDAALDAVVVPCNTASVHGLAELRAEFEPDVPVIGTVPAIKPAAAAGGP--IAVWSTAAT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R Y L+ ++ + V+ LA VE + ++ +D + E + G
Sbjct: 121 TRSGYQRQLVETFARGVEVTAVACAGLAEAVE--SADPRLIDDAVAYAAELTPGDVHG-- 176
Query: 192 TDVIVLACTHYPLI 205
+VL CTHY L+
Sbjct: 177 ---VVLGCTHYDLV 187
>gi|126643405|ref|YP_001086389.1| glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 188
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168
PA+K A A T S I++L+T T++ +LI +Y + LV + LA ++E
Sbjct: 22 PAVKPAVAMTLSKHIAVLATATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETG--- 78
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
K E+K ++ ++ D I+L CTHYP + +++ + ++ S+++
Sbjct: 79 -KAHTAEVKDYLKNILAPLVEQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTA 137
Query: 229 R 229
+
Sbjct: 138 Q 138
>gi|163736577|ref|ZP_02143996.1| Glutamate racemase [Phaeobacter gallaeciensis BS107]
gi|161390447|gb|EDQ14797.1| Glutamate racemase [Phaeobacter gallaeciensis BS107]
Length = 269
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 40/220 (18%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL ++ +P+ F+Y D+ PYG + + + D+ K
Sbjct: 2 AVGIFDSGLGGLTVLNAVQERLPDVDFLYYGDNAHAPYGVRDAEDIYQLTKAAVEDMWSK 61
Query: 75 YQPVLSVIACNTA-FTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSG----------- 121
L V+ACNTA ++ + P LG + +A Q G
Sbjct: 62 -GCNLVVLACNTASAAALRRMQENGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IK 170
+++ +TPAT+ R + L + VE ACG +
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIG-------------VDVEAQACGGVVDAIEDGDMI 167
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ E ++ ++ ++++ +L CTHYPL+ +F+
Sbjct: 168 LAEALVRSHVDA--LKRKMPEPQAAILGCTHYPLMEEIFQ 205
>gi|269128064|ref|YP_003301434.1| glutamate racemase [Thermomonospora curvata DSM 43183]
gi|268313022|gb|ACY99396.1| glutamate racemase [Thermomonospora curvata DSM 43183]
Length = 270
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 16/247 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL V + + +P+ +Y+ D PYG ++ + + ++ +
Sbjct: 6 IGIFDSGYGGLTVARAILDQLPDEPILYLGDSARQPYGPRPIAEVRAFALQMLDQLVAEG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RR 134
+L VIACN+A + + R + PA ++AA T +G + +++T AT+ R
Sbjct: 66 VKML-VIACNSASAAMLRDARERYDVPIVEVIKPATRRAARATTNGRVGLIATHATVTSR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++ + HI L S + R E+ K E+ D
Sbjct: 125 AYED----AFAAAPHIELTS--VACPRFVEFVEAGITKGPELLSVARSYLQPIVDAGCDT 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCL----LPRINTHQTRVFDDHA 249
++L CTHYPL++ + V + +++ A+ R L L R T V H
Sbjct: 179 LILGCTHYPLLIGAISYVVGDGVTLVSSAEETAKDVYRVLQDQGLARAETASPPV---HR 235
Query: 250 LFLSGKP 256
++G P
Sbjct: 236 FLVTGDP 242
>gi|88808406|ref|ZP_01123916.1| Glutamate racemase [Synechococcus sp. WH 7805]
gi|88787394|gb|EAR18551.1| Glutamate racemase [Synechococcus sp. WH 7805]
Length = 268
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 37/199 (18%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD--KY 75
+FDSG+GGL VL+++ IY+ D PYG+ ++ + S+++ ++
Sbjct: 7 LFDSGLGGLTVLRRVLERHGAVPTIYLGDTARVPYGSRSPSEIR----VIASEVVAWLRH 62
Query: 76 QPVLSVI-ACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q V +V+ ACNT L +D E ++ P + +GA AAA + + +L+TPAT+
Sbjct: 63 QKVTTVVMACNTTNALARDVAEGKAGVPVVGLIGA------AAAMVRESRVGVLATPATV 116
Query: 133 RRTYTSNLIHS------YVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGC 183
+ I + V Q V +I A + E Y I+ + ++ ++
Sbjct: 117 ASGAYRDSIEALHPGTLVVQQACPDFVP-LIEAGDLNCDELYRAAIRYLQPLLEASVQS- 174
Query: 184 FIEKEGKRTDVIVLACTHY 202
IVL CTHY
Sbjct: 175 -----------IVLGCTHY 182
>gi|149204811|ref|ZP_01881774.1| Glutamate racemase [Roseovarius sp. TM1035]
gi|149141780|gb|EDM29833.1| Glutamate racemase [Roseovarius sp. TM1035]
Length = 270
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 46/223 (20%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70
++ IFDSG+GGL V + +PE +Y+ D+ PYG + + + LF+
Sbjct: 2 AVGIFDSGLGGLTVWDAVSKRLPEVPLVYLGDNAHAPYGVRDADDIYDLTTSSVERLFAA 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121
D L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 GCD-----LVILACNTASAAALRRMQESWVPRDKRVLGVFVPLIEALTERQWGDNSPPRE 116
Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--------- 168
+++ +TPAT+R S+ ++ + VE ACG
Sbjct: 117 VAVKNVALFATPATVR------------SRAFQRELAFRAIGVDVEAQACGGVVDAIEDG 164
Query: 169 -IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ + E ++ ++ ++++ + VL CTHYPL+ VF+
Sbjct: 165 DMILAEALVRSHVDA--LKRKMPHPEAAVLGCTHYPLVQEVFQ 205
>gi|126737902|ref|ZP_01753632.1| glutamate racemase [Roseobacter sp. SK209-2-6]
gi|126721295|gb|EBA17999.1| glutamate racemase [Roseobacter sp. SK209-2-6]
Length = 269
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 46/223 (20%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70
++ IFDSG+GGL VL + +P+ F+Y AD PYG + ED KK + ++S
Sbjct: 2 AVGIFDSGLGGLTVLNAAQSRLPDVDFLYYADSARAPYGVRDAEDIYQLTKKAVAEMWSK 61
Query: 71 ILDKYQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG------- 121
D L ++ACNT A L + + LG + +A Q G
Sbjct: 62 GCD-----LVILACNTASAAALRRMQEEGLPEGKRVLGVFVPLIEALTERQWGDNSPPRE 116
Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--------- 168
+++ +TPAT+ S+ ++ + VE ACG
Sbjct: 117 VEVKHVALFATPATVS------------SRAFQRELAFRAIGVDVEAQACGGVVDAIEDG 164
Query: 169 -IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ + E ++ ++ ++++ +L CTHYPL+ F+
Sbjct: 165 DLILAEALVRSHVDA--LKRKMPEPQAAILGCTHYPLMEQDFQ 205
>gi|221639366|ref|YP_002525628.1| glutamate racemase [Rhodobacter sphaeroides KD131]
gi|221160147|gb|ACM01127.1| Glutamate racemase [Rhodobacter sphaeroides KD131]
Length = 266
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 42/219 (19%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSDILD 73
+FDSG+GGL VL ++ +PE F+Y D+ PYG + +D H L+++ D
Sbjct: 1 MFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAEGCD 60
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG---------- 121
L ++ACNTA ++ T+ LG + +A Q G
Sbjct: 61 -----LVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAV 115
Query: 122 -LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KEDEI 176
+++ +TPAT+ S+ ++ + VE CG + + DEI
Sbjct: 116 KHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQGDEI 163
Query: 177 KKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211
E + +E +R +L CTHYPL+ +F++
Sbjct: 164 LAEALVRSHVEALKRRMPHPQAAILGCTHYPLMEPIFQE 202
>gi|163742776|ref|ZP_02150161.1| glutamate racemase [Phaeobacter gallaeciensis 2.10]
gi|161384031|gb|EDQ08415.1| glutamate racemase [Phaeobacter gallaeciensis 2.10]
Length = 269
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 40/220 (18%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL ++ +P+ F+Y D+ PYG + + + D+ K
Sbjct: 2 AVGIFDSGLGGLTVLNAVQERLPDVDFLYYGDNAHAPYGVRDAEDIYQLTKAAVEDMWSK 61
Query: 75 YQPVLSVIACNTA-FTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSG----------- 121
L V+ACNTA ++ P LG + +A Q G
Sbjct: 62 -GCNLVVLACNTASAAALRRMQEDGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IK 170
+++ +TPAT+ R + L + VE ACG +
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIG-------------VDVEAQACGGVVDAIEDGDMI 167
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ E ++ ++ ++++ +L CTHYPL+ +F+
Sbjct: 168 LAEALVRSHVDA--LKRKMPEPQAAILGCTHYPLMEEIFQ 205
>gi|154249839|ref|YP_001410664.1| glutamate racemase [Fervidobacterium nodosum Rt17-B1]
gi|154153775|gb|ABS61007.1| glutamate racemase [Fervidobacterium nodosum Rt17-B1]
Length = 276
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 106/221 (47%), Gaps = 16/221 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSGIGGL VL+K+ +P H+IYVAD + PYG ++ + +++K
Sbjct: 2 NIGLFDSGIGGLSVLKKLIETLPA-HYIYVADTMRAPYGTKSSETIETFSREIIGFLMEK 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ ACNT+ + + + R+ F + + + A A+ Y + ++++ T T++
Sbjct: 61 KVERI-FAACNTSDSTL-SKYRNNF-RIPYHSIIQAGVSASKYER---VAVIGTHTTVQS 114
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-RTD 193
N + + + + + + S VEE + E +K ++E K + D
Sbjct: 115 GIYKNALEAKGKK--VMQRPAQLFVSLVEEGIFYGNMVEAVVK-----FYLEPFRKFKPD 167
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++L CTH+P + + ++ V +D +D + R L+
Sbjct: 168 ELILGCTHFPFLKDIIMRVM-GNVRVIDPADELVREVSHLV 207
>gi|315638310|ref|ZP_07893491.1| glutamate racemase [Campylobacter upsaliensis JV21]
gi|315481657|gb|EFU72280.1| glutamate racemase [Campylobacter upsaliensis JV21]
Length = 248
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 31/235 (13%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +
Sbjct: 3 IGVFDSGVGGLSVLKSLYEANLFEEIIYYGDTARVPYGVKDKETIIKFCLEAL-EFFKSF 61
Query: 76 QPVLSVIACNTA--FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + +IACNTA + L R+ FP + A + I +++T AT+
Sbjct: 62 KIDMLIIACNTASAYALEALRARADFPIYGVIEAGVRATCKNLEDKDKEILVIATKATIN 121
Query: 134 -RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE------ 186
R Y NL ++ + +++ + VEE GI EG F++
Sbjct: 122 SRQYQINLEKEGFTR--VKALATGLFVPMVEE---GI----------FEGEFLKSAFLHY 166
Query: 187 -KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
K+ K D ++LACTH+PL+ + + + ++I R N+H
Sbjct: 167 FKDVKSPDALILACTHFPLLSKALSEFFGSKTRLIHSGEAIVE-----FLRENSH 216
>gi|254440325|ref|ZP_05053819.1| glutamate racemase [Octadecabacter antarcticus 307]
gi|198255771|gb|EDY80085.1| glutamate racemase [Octadecabacter antarcticus 307]
Length = 269
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 98/242 (40%), Gaps = 50/242 (20%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70
++ IFDSG+GGL VL ++ +P+ F+Y AD PYG +D + LF
Sbjct: 2 AVGIFDSGLGGLTVLDAVQQRLPDVPFVYYADSANAPYGVRTADDIYNLTTAATQALFDA 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
D L ++ACNTA ++ ++ VP K+ + + A
Sbjct: 62 GCD-----LVILACNTASAAALRRMQESW--------VPKDKRVLG------VFVPLIEA 102
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG------- 168
R++ N V H+ L ++ ++SR VE ACG
Sbjct: 103 MTERSWGDNSPPREVGVKHVALFATPATVSSRAFQRELAFRAIGVDVEGQACGGVVDAIE 162
Query: 169 ---IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
+ + E ++ ++ ++++ D VL CTHYP++ F+ V +D
Sbjct: 163 EGDMILAEALVRSHVDA--LKRKMPEPDAAVLGCTHYPMMQDAFQTALGADVKVFSQADL 220
Query: 226 IA 227
+A
Sbjct: 221 VA 222
>gi|148239373|ref|YP_001224760.1| glutamate racemase [Synechococcus sp. WH 7803]
gi|147847912|emb|CAK23463.1| Glutamate racemase [Synechococcus sp. WH 7803]
Length = 268
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
FDSG+GGL VL+++ IY+ D PYG+ ++ + + + D+ Q
Sbjct: 8 FDSGLGGLTVLRRVLESHGGVPTIYLGDTARVPYGSRSPSEIRAIASEVVAWLRDQ-QVT 66
Query: 79 LSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNT L +D E ++ P + +GA AAA + + +L+TPAT+
Sbjct: 67 TVVMACNTTNALARDVTEGQAGVPVVGLIGA------AAAMVRDSRVGVLATPATV 116
>gi|254453816|ref|ZP_05067253.1| glutamate racemase [Octadecabacter antarcticus 238]
gi|198268222|gb|EDY92492.1| glutamate racemase [Octadecabacter antarcticus 238]
Length = 269
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 98/242 (40%), Gaps = 50/242 (20%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70
++ IFDSG+GGL VL ++ +P+ F+Y AD PYG +D + LF
Sbjct: 2 AVGIFDSGLGGLTVLDAVQQRLPDVPFVYYADSANAPYGVRTADDIYNLTTAATQALFDA 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
D L ++ACNTA ++ ++ VP K+ + + A
Sbjct: 62 GCD-----LVILACNTASAAALRRMQESW--------VPKDKRVLG------VFVPLIEA 102
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG------- 168
R++ N V H+ L ++ ++SR VE ACG
Sbjct: 103 MTERSWGDNSPPREVGVKHVALFATPATVSSRAFQRELAFRAIGVDVEGQACGGVVDAIE 162
Query: 169 ---IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
+ + E ++ ++ ++++ D VL CTHYP++ F+ V +D
Sbjct: 163 EGDMILAEALVRSHVDA--LKRKMPEPDAAVLGCTHYPMMQDAFQAALGADVKVFSQADL 220
Query: 226 IA 227
+A
Sbjct: 221 VA 222
>gi|227877591|ref|ZP_03995646.1| glutamate racemase [Lactobacillus crispatus JV-V01]
gi|256844565|ref|ZP_05550051.1| glutamate racemase [Lactobacillus crispatus 125-2-CHN]
gi|256849046|ref|ZP_05554479.1| glutamate racemase [Lactobacillus crispatus MV-1A-US]
gi|262047528|ref|ZP_06020483.1| glutamate racemase [Lactobacillus crispatus MV-3A-US]
gi|293381594|ref|ZP_06627581.1| glutamate racemase [Lactobacillus crispatus 214-1]
gi|227862815|gb|EEJ70279.1| glutamate racemase [Lactobacillus crispatus JV-V01]
gi|256613643|gb|EEU18846.1| glutamate racemase [Lactobacillus crispatus 125-2-CHN]
gi|256713822|gb|EEU28810.1| glutamate racemase [Lactobacillus crispatus MV-1A-US]
gi|260572104|gb|EEX28669.1| glutamate racemase [Lactobacillus crispatus MV-3A-US]
gi|290921864|gb|EFD98879.1| glutamate racemase [Lactobacillus crispatus 214-1]
Length = 268
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83
V +K+ +P +++ D+ PYG+ + +K + FL + L + A
Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRTKEEIIELVRKSVQFLLEKNVK-----LIIFA 72
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIH 142
CNTA + +++ +G + + AA+ T++ ++++ST AT + I
Sbjct: 73 CNTATAMAMSTIQAEIDPQ-IIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIR 131
Query: 143 SYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ + +++ LA VE ++ +K+ ++ +GK D +++ C
Sbjct: 132 FRDPEIQVTELAAPKLAPLVEAQKDHETNLKV--------VKESLTPLQGKDFDTLIMGC 183
Query: 200 THYPLIVHVFRQ-LSPWPVDWLDNSDSIAR 228
THYPLI F++ ++ V LD +D +A+
Sbjct: 184 THYPLIQKEFKEAINDKNVTILDPADQVAQ 213
>gi|256852216|ref|ZP_05557602.1| glutamate racemase [Lactobacillus jensenii 27-2-CHN]
gi|260661752|ref|ZP_05862663.1| glutamate racemase [Lactobacillus jensenii 115-3-CHN]
gi|282932656|ref|ZP_06338070.1| glutamate racemase [Lactobacillus jensenii 208-1]
gi|256615262|gb|EEU20453.1| glutamate racemase [Lactobacillus jensenii 27-2-CHN]
gi|260547499|gb|EEX23478.1| glutamate racemase [Lactobacillus jensenii 115-3-CHN]
gi|281303230|gb|EFA95418.1| glutamate racemase [Lactobacillus jensenii 208-1]
Length = 265
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83
VL+K+ +P +++ D PYG+ + +K + FL S K V+ + A
Sbjct: 18 VLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIELTRKSVDFLLS----KNVKVI-IFA 72
Query: 84 CNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
CNT A +I+ E+ + G++ AA T++ ++++ T T+ S
Sbjct: 73 CNTATAAAMEVIQKEIAPQIIGVIQSGSLA----AAKITKNNKVAVIGTHVTIESHAYSK 128
Query: 140 LIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I + +++ LA VE ++A + + D + +GK D +V
Sbjct: 129 EIKFRNPDIKVTELATPKLAPLVEAQRDFAYNVDVVRDSLD--------SLKGKDFDTMV 180
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
L CTHYP+I ++ + +D +D +A+ +L R
Sbjct: 181 LGCTHYPIIEKEISEIVGSTIKLVDPADQVAQYTENILKR 220
>gi|260663402|ref|ZP_05864293.1| glutamate racemase [Lactobacillus fermentum 28-3-CHN]
gi|260552254|gb|EEX25306.1| glutamate racemase [Lactobacillus fermentum 28-3-CHN]
Length = 268
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 16/258 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V++ ++ +P I+V D FPYG +D A +
Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGT-KDQAEVR 51
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L L K+ + V+ACNTA L++ + +G + P + A A + G
Sbjct: 52 QLALSIGAFLLKHDVKMMVVACNTATAAALPALQAAL-PIPVIGVIEPGARAALAQDKKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT I + ++ + V E+ K E+ E
Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIV-EHGQTETAKAQEVVSEQL 169
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
F E K +++ CTH+P + + V +D + A+ L +
Sbjct: 170 MTFKEHPVK---TLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226
Query: 242 TRVFDDHALFLSGK-PDI 258
++ L+ +G PD+
Sbjct: 227 NHAHPNYHLYSTGNLPDL 244
>gi|297205618|ref|ZP_06923014.1| glutamate racemase [Lactobacillus jensenii JV-V16]
gi|297150196|gb|EFH30493.1| glutamate racemase [Lactobacillus jensenii JV-V16]
Length = 265
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83
VL+K+ +P +++ D PYG+ + +K + FL S K V+ + A
Sbjct: 18 VLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIELTRKSVDFLLS----KNVKVI-IFA 72
Query: 84 CNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
CNT A +I+ E+ + G++ AA T++ ++++ T T+ S
Sbjct: 73 CNTATAAAMEVIQKEIAPKIIGVIQSGSLA----AAKITKNNKVAVIGTHVTIESHAYSK 128
Query: 140 LIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I + +++ LA VE ++A + + D + +GK D +V
Sbjct: 129 EIKFRNPDIKVTELATPKLAPLVEAQRDFAYNVDVVRDSLD--------SLKGKDFDTMV 180
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
L CTHYP+I ++ + +D +D +A+ +L R
Sbjct: 181 LGCTHYPIIEKEISEIVGSTIKLVDPADQVAQYTENILKR 220
>gi|84515579|ref|ZP_01002941.1| Glutamate racemase [Loktanella vestfoldensis SKA53]
gi|84510862|gb|EAQ07317.1| Glutamate racemase [Loktanella vestfoldensis SKA53]
Length = 270
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 54/227 (23%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--------NWEDHALKKRLMF 66
++ IFDSG+GGL VL + +P+ +Y+ D PYG N A ++
Sbjct: 2 AVGIFDSGLGGLTVLDAVAKRLPDVPLVYLGDSAHAPYGVRTPDDIYNLTTAATQR---- 57
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA--FLGAVPAIKQAAAYTQSG--- 121
LF D L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 58 LFDAGCD-----LVILACNTASAAALRRMQESWVPQGKRVLGVFVPLIEALTERQWGDNS 112
Query: 122 --------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----- 168
+++ +TPAT+ S+ ++ + VE ACG
Sbjct: 113 PPREVAIKHVALFATPATVS------------SRAFQRELAFRAIGVDVEAQACGGVVDA 160
Query: 169 -----IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ + E ++ ++ + ++ D VL CTHYPL+ VF+
Sbjct: 161 IEDGDMILAEALVRSHVDA--LRRKMPNPDAAVLGCTHYPLMEKVFQ 205
>gi|86138828|ref|ZP_01057400.1| glutamate racemase [Roseobacter sp. MED193]
gi|85824475|gb|EAQ44678.1| glutamate racemase [Roseobacter sp. MED193]
Length = 269
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 46/223 (20%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70
++ IFDSG+GGL VL+ + +P+ F+Y AD PYG + ED + K + ++S
Sbjct: 2 AVGIFDSGLGGLTVLKAAQSRLPDVDFLYYADSARAPYGVRDAEDIFNLTKAAVNDMWSK 61
Query: 71 ILDKYQPVLSVIACNTA-FTLIKDELRSTFPSMA-FLGAVPAIKQAAAYTQSG------- 121
D L ++ACNTA ++ P+ LG + +A Q G
Sbjct: 62 GCD-----LVILACNTASAAALRRMQEEGLPAGKRVLGVFVPLIEAMTERQWGDNSPPRE 116
Query: 122 ----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--------- 168
+++ +TPAT+ S+ ++ + VE ACG
Sbjct: 117 VEVKHVALFATPATVS------------SRAFQRELAFRAIGVDVEAQACGGIVDAIEDG 164
Query: 169 -IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ + E ++ ++ ++++ + +L CTHYPL+ F+
Sbjct: 165 DMILAEALVRSHVDA--LKRKMPEPEAAILGCTHYPLMEKEFQ 205
>gi|149914761|ref|ZP_01903291.1| indolepyruvate ferredoxin oxidoreductase [Roseobacter sp. AzwK-3b]
gi|149811554|gb|EDM71389.1| indolepyruvate ferredoxin oxidoreductase [Roseobacter sp. AzwK-3b]
Length = 270
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 38/220 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + S + D
Sbjct: 2 AVGIFDSGLGGLTVLDAVEKRLPDVPFVYFGDNAHAPYGVRDADDVYDLTTRAVSRLWDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ + LG + +A Q G
Sbjct: 62 GCD-LVILACNTASAAALRRMQENWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171
+++ +TPAT+ S+ ++ + VE ACG + +
Sbjct: 121 HVALFATPATVS------------SRAFQRELAFRAIGVDVEAQACGGVVDAIEEGDMIL 168
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
E ++ ++ ++++ + +L CTHYPL+ + F++
Sbjct: 169 AEALVRSHVDA--LKRKMPNPEAAILGCTHYPLMQNAFQE 206
>gi|315606165|ref|ZP_07881193.1| glutamate racemase [Actinomyces sp. oral taxon 180 str. F0310]
gi|315312123|gb|EFU60212.1| glutamate racemase [Actinomyces sp. oral taxon 180 str. F0310]
Length = 276
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ IY+ D PYG+ ++ + ++ +
Sbjct: 6 IGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGSRAIAQVRSLTLSALDELASRG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTF------PSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L VIACNTA + R + P + + PA +Q+ + T++ + ++ T
Sbjct: 66 VKAL-VIACNTATAAALADARERYWIDAGIPVIEVI--TPAARQSVSATRNRHVGVIGTK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC---------GIKIKEDEIKKEI 180
AT++ S+ ++ +++ + RV + AC G+ DEI+
Sbjct: 123 ATIQ------------SEAYLRALAA-VPGLRVTQQACPAFVDFVEAGVTTG-DEIEAVA 168
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ D ++L CTHYPL+ V ++ V + +S++ A
Sbjct: 169 TEYLTPLKAAGVDTLILGCTHYPLLTGVISRVMGDGVTLVTSSEATA 215
>gi|260497932|ref|ZP_05816049.1| glutamate racemase [Fusobacterium sp. 3_1_33]
gi|260196493|gb|EEW94023.1| glutamate racemase [Fusobacterium sp. 3_1_33]
Length = 257
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 14/225 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ ++ P+ IY AD FPYG LK + D
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTVEQLKTIIKNSI-DF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126
L + V+A N + D++++ + +G P +K + I +
Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKN---NDKVIGIYPPLKDVIKDKMKNTLIIGAKVMI 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+P + Y + + Q H+ S +I + I E I+ I C E
Sbjct: 117 ESPEL--QDYIKREVGNSYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--E 172
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ + D I L+ TH P + F+++ P V D +D++ + +
Sbjct: 173 NKFGKLDSITLSSTHLPWLFSYFKKIIP-EVKLYDPADNLVKAIK 216
>gi|256027385|ref|ZP_05441219.1| Asp/Glu racemase [Fusobacterium sp. D11]
gi|289765349|ref|ZP_06524727.1| glutamate racemase [Fusobacterium sp. D11]
gi|289716904|gb|EFD80916.1| glutamate racemase [Fusobacterium sp. D11]
Length = 257
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 14/225 (6%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ ++ P+ IY AD FPYG LK + D
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTIEQLKTIIKNSI-DF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI-----L 126
L + V+A N + D++++ + +G P +K + I +
Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKN---NDKVIGIYPPLKDVIKDKMKNTLIIGAKVMI 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+P + Y + + Q H+ S +I + I E I+ I C E
Sbjct: 117 ESPEL--QDYIKREVGNSYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--E 172
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ + D I L+ TH P + F+++ P V D +D++ + +
Sbjct: 173 NKFGKLDSITLSSTHLPWLFSYFKKIIP-EVKLYDPADNLVKAIK 216
>gi|238855622|ref|ZP_04645923.1| glutamate racemase [Lactobacillus jensenii 269-3]
gi|260665318|ref|ZP_05866166.1| glutamate racemase [Lactobacillus jensenii SJ-7A-US]
gi|282933004|ref|ZP_06338398.1| glutamate racemase [Lactobacillus jensenii 208-1]
gi|238831766|gb|EEQ24102.1| glutamate racemase [Lactobacillus jensenii 269-3]
gi|260560822|gb|EEX26798.1| glutamate racemase [Lactobacillus jensenii SJ-7A-US]
gi|281302858|gb|EFA95066.1| glutamate racemase [Lactobacillus jensenii 208-1]
Length = 266
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83
VL+K+ +P +++ D PYG+ + ++ + FL S + + + A
Sbjct: 18 VLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIELTRRSVNFLLSKNVK-----VIIFA 72
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIH 142
CNTA + ++ + +G + + AAA T++ ++++ T T+ S I
Sbjct: 73 CNTATAAAMEVIQKEI-TPQIIGVIQSGSLAAARTTKNNKVAVIGTHVTIESHAYSREIK 131
Query: 143 SYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ +++ LA VE +YA I + D + E F D +VL C
Sbjct: 132 FRNPDIEVTELATPQLAPLVEAQRDYAYNIDVVRDSLDSLKEKEF--------DTMVLGC 183
Query: 200 THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
THYP+I ++ + +D +D +A+ +L R
Sbjct: 184 THYPIIEKEISKVVGSTIKLVDPADQVAQYTENVLKR 220
>gi|15615633|ref|NP_243937.1| glutamate racemase [Bacillus halodurans C-125]
gi|10175693|dbj|BAB06790.1| glutamate racemase [Bacillus halodurans C-125]
Length = 200
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
VIACNTA ++ DE++ P + +G V P A T++ ++++ T T++
Sbjct: 3 VIACNTAAAVVLDEVKEKLP-IPVVGVVQPGAISALKVTKNEHVAVIGTTGTIQ------ 55
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEI---KKEIEGC---FIEKEGKR 191
S + H + + +VE AC + + E I + +E C +GK
Sbjct: 56 ------SGAYEHTLKKINNRVQVESLACPPFVPLVERGIFSGPEALETCSETLKPLQGKG 109
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
D ++L CTHYPL+ V +++ + + + D AR LL
Sbjct: 110 FDTLILGCTHYPLLKPVIQEVMGPDIQIISSGDETAREVSGLL 152
>gi|78777751|ref|YP_394066.1| glutamate racemase [Sulfurimonas denitrificans DSM 1251]
gi|78498291|gb|ABB44831.1| glutamate racemase [Sulfurimonas denitrificans DSM 1251]
Length = 247
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 12/191 (6%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSGIGGL V++ + IY D PYG +D + R + ++
Sbjct: 5 VFDSGIGGLTVVKSLLENKLFEEIIYFGDTARVPYG-IKDKSTIIRYAIEAVEFFKNFEL 63
Query: 78 VLSVIACNTAFTLIKDELR--STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-R 134
L ++ACNT E+R S+ P + + A A ++ I IL T AT+ +
Sbjct: 64 DLIIVACNTVSAHALSEMREASSCPVIGVVEAGILATANALKDKNSNILILGTKATINSK 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y L ++ ++ + VEE +I + +K KE ++ D
Sbjct: 124 AYEIGLNAEGFK--NLQAKATGLFVPIVEEEIYSGEILDATMKHYF------KEIQKPDA 175
Query: 195 IVLACTHYPLI 205
I+L CTH+PLI
Sbjct: 176 IILGCTHFPLI 186
>gi|315037664|ref|YP_004031232.1| glutamate racemase [Lactobacillus amylovorus GRL 1112]
gi|312275797|gb|ADQ58437.1| glutamate racemase [Lactobacillus amylovorus GRL 1112]
Length = 268
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIA 83
V +K+ +P +++ D+ PYG+ + +K + FL + L + A
Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRIKEEIIELVRKSVQFLLEKNVK-----LIIFA 72
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIH 142
CNTA + +++ +G + + AA+ T++ ++++ST AT + I
Sbjct: 73 CNTATAMAMSTIQAEIDPQ-IIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIR 131
Query: 143 SYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ + +++ LA VE ++ +K+ ++ +GK D +++ C
Sbjct: 132 FRDPEIQVTELAAPKLAPLVEAQKDHETNLKV--------VKESLTPLQGKDFDTLIMGC 183
Query: 200 THYPLIVHVFRQ-LSPWPVDWLDNSDSIAR 228
THYPLI F++ ++ V LD +D +A+
Sbjct: 184 THYPLIQKEFKEAINDKNVTILDPADQVAQ 213
>gi|146276946|ref|YP_001167105.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17025]
gi|189030366|sp|A4WQY6|MURI_RHOS5 RecName: Full=Glutamate racemase
gi|145555187|gb|ABP69800.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17025]
Length = 270
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 48/225 (21%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH-------ALKKRLMFL 67
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + A +RL
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFALTCAATERLWAE 61
Query: 68 FSDILDKYQPVLSVIACNTA-FTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSG---- 121
D++ ++ACNTA +K S P LG + +A Q G
Sbjct: 62 GCDLV--------ILACNTASAAALKRMQESWIPRDKRVLGVFVPLIEALTERQWGDNSP 113
Query: 122 -------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI--- 171
+++ +TPAT+ S+ ++ + VE CG +
Sbjct: 114 PREVAVKHVALFATPATV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAI 161
Query: 172 -KEDEIKKE-IEGCFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211
+ DEI E + +E +R +L CTHYPL+ F++
Sbjct: 162 EQGDEILAEALVRSHVEALKRRMPHPQAAILGCTHYPLMEATFQE 206
>gi|254419828|ref|ZP_05033552.1| Asp/Glu/Hydantoin racemase superfamily [Brevundimonas sp. BAL3]
gi|196186005|gb|EDX80981.1| Asp/Glu/Hydantoin racemase superfamily [Brevundimonas sp. BAL3]
Length = 285
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 42/245 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL V +++ P+ F+Y+AD PYG + + L + L +
Sbjct: 2 AIGVFDSGVGGLTVHRELTRRFPQRDFVYLADQAHAPYGGRGGEDIVE-LTRAGCERLFE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSM--------AFLG-AVPAIKQAAAYTQS---- 120
+ V+ACNTA + L+ T+ P + LG VP I+ A S
Sbjct: 61 AGASVVVLACNTASAIALRRLQQTWIPGLRERLGRPVNVLGIIVPTIEAATGKPWSFEAE 120
Query: 121 -----------GLISILSTPAT-LRRTYTSNL------IHSYVSQCHIHLVSSMILASRV 162
+ + T AT + R + + I + C L + L +
Sbjct: 121 RAAEGDKVEAIAVTGVFCTAATAISRVFEIEIDKRREDIAVFSEPCP-GLAGLIELGAPR 179
Query: 163 EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
EE + D +++ I G+ D +L CTHY +I +F P ++
Sbjct: 180 EELKVVVDDHVDALRRRI--------GRHPDKAILGCTHYEIIAELFASALPAGTVLINQ 231
Query: 223 SDSIA 227
++A
Sbjct: 232 PTAVA 236
>gi|320095955|ref|ZP_08027573.1| glutamate racemase [Actinomyces sp. oral taxon 178 str. F0338]
gi|319977112|gb|EFW08837.1| glutamate racemase [Actinomyces sp. oral taxon 178 str. F0338]
Length = 275
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 42/241 (17%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I IFDSG+GGL V + + +P+ +Y+ D PYG ++
Sbjct: 1 MDNAP--------IGIFDSGLGGLTVARAVIDKLPDEEVVYLGDTRHTPYGPRPVAQVRT 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF------PSMAFLGAVPAIKQAAA 116
+ + L +IACNTA + R + P + + PA +QA
Sbjct: 53 YTLACLDQLASMGVKAL-IIACNTATAAALADARERYWVDAGIPVIEVI--TPAARQAVT 109
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR-----VEEYACGIKI 171
T++G I ++ T AT++ S+++ + V + L R VE GI
Sbjct: 110 ATRNGRIGVIGTRATIQSEAYSHVLAA---------VPGLSLTQRECPRFVEFVEAGIT- 159
Query: 172 KEDEIKKEIEGCFIE-----KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
E+E + KE D +VL CTHYPL+ V ++ V + +S++
Sbjct: 160 ----TGAELEAVATQYLAPLKEAG-VDTLVLGCTHYPLLTGVIGRVMGEEVALVTSSEAT 214
Query: 227 A 227
A
Sbjct: 215 A 215
>gi|54027044|ref|YP_121286.1| putative glutamate racemase [Nocardia farcinica IFM 10152]
gi|54018552|dbj|BAD59922.1| putative glutamate racemase [Nocardia farcinica IFM 10152]
Length = 253
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 11/213 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G + +R++ +
Sbjct: 3 VALIDSGLGLLPTAAWLRKLRPDVDLLLQLDPDGAPWGPKPEQWTIERVVAAARISIAAG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ V+ CNTA +++R+ P + +G VPAIK AAA + + + R
Sbjct: 63 AEVI-VLPCNTASVTALEQVRAEVGPEVPVIGTVPAIKPAAAACRRVAVWATAATTASR- 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y + LI + + V+ LA ++ + + + T+
Sbjct: 121 -YQAELIEKFGGDAEVVGVACHGLADAIDR-------GDLTAATDAIARAAAQTPAGTEG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+VL CTHYPL+V P V D++ ++A
Sbjct: 173 VVLGCTHYPLVVDAIVAALPAGVRLFDSAQAVA 205
>gi|294676108|ref|YP_003576723.1| glutamate racemase [Rhodobacter capsulatus SB 1003]
gi|294474928|gb|ADE84316.1| glutamate racemase [Rhodobacter capsulatus SB 1003]
Length = 270
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 30/216 (13%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK----KRLMFLFSD 70
++ +FDSG+GGL V + + +PE F+Y D+ PYG + + + L+ +
Sbjct: 2 AVGVFDSGLGGLTVYEAVSKRLPEVAFVYYGDNAHAPYGVRTPDDIYNLTCRGVQRLWDE 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121
D L ++ACNTA ++ + LG + +A Q G
Sbjct: 62 GCD-----LVILACNTASAAALKRMQEHWIPKDKRVLGVFVPLIEALTERQWGDNSPPRE 116
Query: 122 ----LISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI-KEDE 175
+++ +TPAT+ R + L + + V + V+ G +I E
Sbjct: 117 VAVKHVALFATPATVASRAFQRELAYRAIGVD----VEAQPCGGVVDAIEAGDEILAEAL 172
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
++ +E +++ + +L CTHYPL+ F++
Sbjct: 173 VRSHVEA--LKRRMPHPEAAILGCTHYPLMQKTFQE 206
>gi|309812185|ref|ZP_07705943.1| glutamate racemase [Dermacoccus sp. Ellin185]
gi|308433872|gb|EFP57746.1| glutamate racemase [Dermacoccus sp. Ellin185]
Length = 266
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 12/216 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL V + + +P IY+ D PYG +++ + ++++
Sbjct: 6 IGIFDSGYGGLTVARAVLDQLPHEKIIYLGDTARAPYGPRPIAEVRQYAIECLDSLVEQG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACN+A + + R + PA ++AAA T++ + ++ST AT +
Sbjct: 66 VKAL-VIACNSASAAVLHDARERYDVPVVEVIRPATRRAAAATRNNRVGVISTEATHQ-- 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK---KEIEGCFIEKEGKRT 192
+ S+ + + +SS+ VE GI + + K ++G E
Sbjct: 123 -SGAYTDSFAAAPQVK-ISSVPCPRFVEFVEAGITSGPELLTVAHKYLDGLVDEG----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYPL+ V + V + +++ A+
Sbjct: 177 DTLILGCTHYPLLTGVISYVVGSTVTLVSSAEETAK 212
>gi|114771082|ref|ZP_01448522.1| Glutamate racemase [alpha proteobacterium HTCC2255]
gi|114548364|gb|EAU51250.1| Glutamate racemase [alpha proteobacterium HTCC2255]
Length = 269
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 29/255 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V Q++ +P+ +Y+ D+ PYG DH +++ L + +++
Sbjct: 3 IGIFDSGLGGLTVQQEIASRIPDQSLVYLGDNKYAPYG-VRDH---EQIYSLTQNAIERL 58
Query: 76 QPV---LSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG--------- 121
L ++ACNTA + ++ + + LG + +A Q G
Sbjct: 59 WNAGCDLVIVACNTASAVAVKRMQEEWLPENKRVLGVFVPLIEAVTERQWGDNSAPKEVG 118
Query: 122 --LISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+++ +TPAT+ R + L + + L +EE ++ E ++
Sbjct: 119 VKQVALFATPATVATRAFQRELAFRAIG-VDVEAQPCGGLVDAIEEN--DFELAEALVQS 175
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ + VL CTHYP++ F + V + A L+ +N
Sbjct: 176 HVSALL--RRMPNPQAAVLGCTHYPILKKCFEKALGPNVQVYSQGRIV---AESLMHYLN 230
Query: 239 THQTRVFDDHALFLS 253
H ALFL+
Sbjct: 231 RHPRFKEKGEALFLT 245
>gi|291277066|ref|YP_003516838.1| putative glutamate racemase [Helicobacter mustelae 12198]
gi|290964260|emb|CBG40109.1| putative glutamate racemase [Helicobacter mustelae 12198]
Length = 309
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 22/197 (11%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSDILD 73
IFDSG GGL VL+ + IY D PYG ++ + L FL +D
Sbjct: 5 IFDSGAGGLSVLEHVLRAEIFDSIIYYGDTARLPYGTKHPDSIICFCLEALEFLLVQNVD 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISILSTP 129
+ ++ACNTA D ++ P + +G + AIK + ++ +L T
Sbjct: 65 -----IIIVACNTASAHALDAMQKAAPKIPIIGVIEPGILAIKNRLKNLDAKIL-VLGTK 118
Query: 130 ATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ Y +L + +I + + + S VEE I E + +E +
Sbjct: 119 ATIQSAQYQRHL--EKLGYSNITAIPTSLFVSLVEE-----GIFEGPLVEECLRYYFGGI 171
Query: 189 GKRTDVIVLACTHYPLI 205
D I+L CTH+PL+
Sbjct: 172 DFVPDAIILGCTHFPLL 188
>gi|296137849|ref|YP_003645092.1| glutamate racemase [Tsukamurella paurometabola DSM 20162]
gi|296025983|gb|ADG76753.1| Glutamate racemase [Tsukamurella paurometabola DSM 20162]
Length = 265
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 19/221 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG G + + L P+ + D PYG + + + + +Y
Sbjct: 3 VAVIDSGFGMVNYADALSRLRPDTELVLARDPDNMPYGLLPPERISE-CIVAMAGAAARY 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNT + R+ F P++ +G VPAI+ A A + ++ +T A
Sbjct: 62 RVDAIVVACNTGSMYALEAARARFEPAVPVIGVVPAIRPAGATGRP--FAVWATAAATVS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI ++ LA R+ Y I ++ + + + D+
Sbjct: 120 DYQTSLIDAFADPS---------LAHRIPCYGLAEAIDSGDLDRVADAVAAAADATPPDI 170
Query: 195 --IVLACTHYPL----IVHVFRQLSPWPVDWLDNSDSIARR 229
+VL CTHY L IV R + + D+ + +AR+
Sbjct: 171 ESVVLGCTHYGLVREQIVAALRARTGVDLTVFDSPEPVARQ 211
>gi|57241965|ref|ZP_00369905.1| glutamate racemase [Campylobacter upsaliensis RM3195]
gi|57017157|gb|EAL53938.1| glutamate racemase [Campylobacter upsaliensis RM3195]
Length = 248
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 33/234 (14%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL+ + IY D PYG + + K + + ++
Sbjct: 5 VFDSGVGGLSVLKSLYEANLFEEIIYYGDTARVPYGVKDKETIIKFCLEAL-EFFKSFKI 63
Query: 78 VLSVIACNTA--FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ +IACNTA + L R+ FP + A + I +++T AT+
Sbjct: 64 DMLIIACNTASAYALEALRARADFPIYGVIEAGVRATCKNLQDKDKEILVIATKATINS- 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDEIKKEIEGCFIE------- 186
Q I L +RV+ A G + + E+ I EG F++
Sbjct: 123 ----------KQYQISLKKEGF--TRVKALATGLFVPMVEEGI---FEGEFLKSAFLHYF 167
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
K+ K D ++LACTH+PL+ + + + ++I R N+H
Sbjct: 168 KDVKSPDALILACTHFPLLSKALSEFFGSKTRLIHSGEAIVE-----FLRENSH 216
>gi|311895050|dbj|BAJ27458.1| putative glutamate racemase [Kitasatospora setae KM-6054]
Length = 252
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + D G P+G + + +
Sbjct: 3 IALVDSGIGLLAAAAAIRRLRPDADLVVSCDPDGMPWGPRTPEDITAHALACAR-AAVAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P V+ACNTA LR+ F P++ +G VPAIK AAA ++I +T T
Sbjct: 62 RPDALVVACNTASVHALAHLRAEFEPALPVIGTVPAIKPAAAAGGV--VAIWATSRTTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + +H V+ LA VE + I + TDV
Sbjct: 120 AYQRGLIEEFGGAARVHEVACHGLAEAVE------RADRAAIAAAVASAAARTPADTTDV 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
VL CTHY LI + P P ++D+IA +
Sbjct: 174 -VLGCTHYELIDDLIAAALPGPARLHGSADAIAAQ 207
>gi|237752367|ref|ZP_04582847.1| glutamate racemase [Helicobacter winghamensis ATCC BAA-430]
gi|229375856|gb|EEO25947.1| glutamate racemase [Helicobacter winghamensis ATCC BAA-430]
Length = 258
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHF---IYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GG+ VL+ L+ ++F +Y D PYG +++ + + L
Sbjct: 13 IGVFDSGAGGISVLKN---LIESHNFKEILYYGDTARVPYGVKSKDTIRQYSL----EAL 65
Query: 73 DKYQPV---LSVIACNTA--FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
D + P L ++ACNTA + L + + +P + + Q A ++ I IL
Sbjct: 66 DFFSPFKLDLLIVACNTASAYGLSAMQEVAPYPVIGVIEPGILALQNAIQDKNAKILILG 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ S L+ L +S+ + VEE I E I ++++
Sbjct: 126 TKATICSNLYSKLLREKGYLNTFGLATSLFVP-IVEE-----GIFEGAILDSTIAHYLKQ 179
Query: 188 EGKRTDVIVLACTHYPLIVH 207
+ I+L CTH+PLI +
Sbjct: 180 YPSTPNAIILGCTHFPLIAN 199
>gi|269795791|ref|YP_003315246.1| glutamate racemase [Sanguibacter keddieii DSM 10542]
gi|269097976|gb|ACZ22412.1| glutamate racemase [Sanguibacter keddieii DSM 10542]
Length = 268
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 20/222 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P Y+ D PYG ++ + + ++D+
Sbjct: 6 IGIFDSGVGGLTVARSILDQLPHESIHYIGDTRHSPYGPKPLATVRALALDVMDSLVDQG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
+L VIACN+A + + R + + V PA ++A A T++G + ++ T AT
Sbjct: 66 VKML-VIACNSASAAVLRDARERYTVRHGIPVVEVILPAARRAVAATRTGRVGVIGTRAT 124
Query: 132 LR-RTYTSNLIH----SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+ R Y L S Q VS ++ S V +++ ++ I
Sbjct: 125 IESRAYEDALAVAAGISVTGQACPDFVS--LVESGVTSGPAVLEVSRRYLEPVI------ 176
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYPL+ + V + +++ A+
Sbjct: 177 --AADVDTLILGCTHYPLLTGAISYVMGESVTLVSSAEETAK 216
>gi|293596521|ref|ZP_06684239.1| glutamate racemase [Listeria monocytogenes J2818]
gi|293589867|gb|EFF98201.1| glutamate racemase [Listeria monocytogenes J2818]
Length = 176
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ +L VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRGIKML-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TL 132
T+
Sbjct: 119 TV 120
>gi|119386680|ref|YP_917735.1| glutamate racemase [Paracoccus denitrificans PD1222]
gi|189030363|sp|A1B945|MURI_PARDP RecName: Full=Glutamate racemase
gi|119377275|gb|ABL72039.1| glutamate racemase [Paracoccus denitrificans PD1222]
Length = 270
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 52/227 (22%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH-------ALKKRLMFL 67
++ +FDSG+GGL VL + MP+ +Y+ D+ PYG + A +RL
Sbjct: 2 AVGVFDSGLGGLTVLSAIAARMPDLPLVYLGDNAHTPYGVRDADDIFDLTCAGVERLWAE 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
D++ ++ACNTA ++ T+ +P K+ + +
Sbjct: 62 GCDLV--------ILACNTASAAALKRMQETW--------LPKDKRVLG------VFVPM 99
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACGIKIK 172
A R + N V+ H+ L ++ +ASR VE CG +
Sbjct: 100 IEALTERRWGDNSPPREVAVKHVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVD 159
Query: 173 EDEIKKEIEG-----CFIEKEGKR---TDVIVLACTHYPLIVHVFRQ 211
E+ EI +E +R + +L CTHYPL+ F++
Sbjct: 160 AIEMGDEILAEALVTSHVEALLRRMPHPEAAILGCTHYPLVQAAFQK 206
>gi|89054829|ref|YP_510280.1| glutamate racemase [Jannaschia sp. CCS1]
gi|122498526|sp|Q28PV7|MURI_JANSC RecName: Full=Glutamate racemase
gi|88864378|gb|ABD55255.1| glutamate racemase [Jannaschia sp. CCS1]
Length = 270
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 38/219 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ IY+ D+ PYG E + + D+
Sbjct: 2 AVGIFDSGLGGLTVLDAVTKALPDVPLIYMGDNAHTPYGVREADDIYDLTTAGVQHLFDR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ + LG + +A Q G
Sbjct: 62 GCD-LVILACNTASAAALRRMQEGWVPEGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG----------IKI 171
+++ +TP T+ S+ ++ + VE CG + +
Sbjct: 121 EVALFATPTTVS------------SRAFQRELAFRAIGVDVEAQPCGGVVDAIEDGDMIL 168
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
E ++ ++ +++ +L CTHYPL+ VFR
Sbjct: 169 AEALVRSHVDA--LKRRMPNPQAAILGCTHYPLVEDVFR 205
>gi|332296003|ref|YP_004437926.1| glutamate racemase [Thermodesulfobium narugense DSM 14796]
gi|332179106|gb|AEE14795.1| glutamate racemase [Thermodesulfobium narugense DSM 14796]
Length = 277
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEY--HFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GG+ +L + YVAD + PYGN + L+ + + S L+
Sbjct: 3 IGIFDSGLGGVNILNSIINSNSPLIGDIFYVADTINVPYGNKDIEELELIVGNIIS-FLE 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
L + ACNT+ + + ++L+ + +G + P I + IL+T T+
Sbjct: 62 NKGCELIISACNTSSSTVLNKLKQK-TKIPIIGTIEPTINFVKETFHHKNLIILATKVTI 120
Query: 133 RRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
S + + +S C +++ V+ L +E ++I ED + + ++ I+
Sbjct: 121 E----SKIFENALSACDYNVYPVACPKLVDAIEFMNPSLEI-EDLLNRYLQ---IDINAS 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLS 213
I+L CTHYPLI ++++
Sbjct: 173 EPIGILLGCTHYPLIKSQIKEVA 195
>gi|85711145|ref|ZP_01042205.1| glutamate racemase [Idiomarina baltica OS145]
gi|85695058|gb|EAQ32996.1| glutamate racemase [Idiomarina baltica OS145]
Length = 248
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 33/202 (16%)
Query: 18 IFDSGIGGLIV---LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+FDSG+GGL V LQ+ R+ +Y D PYG+ +D R + +
Sbjct: 5 VFDSGVGGLTVARSLQRSRYFS---ELLYFGDTARVPYGS-KDSNTVTRYALEAVEFFNG 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLG----AVPAIKQAAAYTQSGLISILSTPA 130
++ACNT +++ E F + G V A++QA + +++T
Sbjct: 61 TDVDALIVACNTV-SVVALETMQKFSNKPVYGVLEPGVMALEQATEVNHDSQVLVIAT-- 117
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG- 189
R T S + Q ++M + I E+E+ EG +
Sbjct: 118 --RSTIQSGEYQRRIKQLGFEHATAMAT-------PLFVPIVEEEL---YEGAILHATFD 165
Query: 190 ------KRTDVIVLACTHYPLI 205
+R DV++L CTH+PLI
Sbjct: 166 HYFSALERPDVVLLGCTHFPLI 187
>gi|126735639|ref|ZP_01751384.1| glutamate racemase, putative [Roseobacter sp. CCS2]
gi|126714826|gb|EBA11692.1| glutamate racemase, putative [Roseobacter sp. CCS2]
Length = 270
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 48/225 (21%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL----KKRLMFLFSD 70
++ IFDSG+GGL VL + +P+ +Y+ D PYG + K LF
Sbjct: 2 AVGIFDSGLGGLTVLDAVAKRLPDVPLVYMGDSAHAPYGVRTPDDIYDLTTKSTQRLFDA 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG------- 121
D L ++ACNTA ++ + LG + +A Q G
Sbjct: 62 GCD-----LVILACNTASAAALRRMQEAWVPDGKRVLGVFVPLIEALTERQWGDNSPPRE 116
Query: 122 ----LISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-------- 168
+++ +TPAT+ R + L + VE ACG
Sbjct: 117 VDTKHVALFATPATVSSRAFQRELAFRAIG-------------VDVEAQACGGVVDAIEE 163
Query: 169 --IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
+ + E + ++ ++++ D +L CTHYPL+ F++
Sbjct: 164 GDMILAEALVSSHVDA--LKRKMPEPDAAILGCTHYPLMAKEFQK 206
>gi|56459706|ref|YP_154987.1| glutamate racemase [Idiomarina loihiensis L2TR]
gi|56178716|gb|AAV81438.1| Glutamate racemase [Idiomarina loihiensis L2TR]
Length = 248
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + ++ +Y D PYG+ +D R + +
Sbjct: 5 VFDSGVGGLTVARSLQQSGCFSELLYYGDTARVPYGS-KDSNTVTRYALEAVEFFNGADV 63
Query: 78 VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNT ++++ S P L V A++Q S + +++T +T+
Sbjct: 64 DCLVVACNTVSVTALEQMQKFSNKPVYGVLEPGVMALEQLQGIDTSAQVLVIATRSTINS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I + + ++ +++ + VEE ++ + I +E + K ++ DV
Sbjct: 124 GAYQQQIQA-LGYNQVNAMATPLFVPIVEE-----ELYDGPILQETFKHYFGKL-EKPDV 176
Query: 195 IVLACTHYPLIVH 207
++L CTH+PLI
Sbjct: 177 VLLGCTHFPLIAE 189
>gi|207093320|ref|ZP_03241107.1| glutamate racemase [Helicobacter pylori HPKX_438_AG0C1]
Length = 156
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVLGTKATI 120
Query: 133 RRTYTSNLI--HSYVSQCHI 150
+ N + Y++ H+
Sbjct: 121 QSNAYDNALKQQGYLNVSHL 140
>gi|83951823|ref|ZP_00960555.1| Glutamate racemase [Roseovarius nubinhibens ISM]
gi|83836829|gb|EAP76126.1| Glutamate racemase [Roseovarius nubinhibens ISM]
Length = 270
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 50/225 (22%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED-HAL-KKRLMFLFSD 70
++ IFDSG+GGL VL + +P+ +Y D+ PYG + +D H L ++ + +L+++
Sbjct: 2 AVGIFDSGLGGLTVLSAIEKRLPDLPLVYFGDNAHAPYGVRDADDIHNLTRQHVEYLWAN 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
D L ++ACNTA ++ VP K+ + + A
Sbjct: 62 GCD-----LVILACNTASAAALRRMQEA--------GVPQGKRVLG------VFVPLIEA 102
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSS-MILASR--------------VEEYACG------- 168
R + N V+ H+ L ++ ++SR VE +CG
Sbjct: 103 LTERNWGDNSPPREVAVKHVALFATPATVSSRAFQRELAFRAIGVDVEAQSCGGVVDAIE 162
Query: 169 ---IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
+ + E ++ ++ ++++ +L CTHYPL+ F+
Sbjct: 163 DGDMILAEALVRSHVDA--LKRKMPNPQAAILGCTHYPLMEAQFQ 205
>gi|325956149|ref|YP_004286759.1| glutamate racemase [Lactobacillus acidophilus 30SC]
gi|325332714|gb|ADZ06622.1| glutamate racemase [Lactobacillus acidophilus 30SC]
gi|327182953|gb|AEA31400.1| glutamate racemase [Lactobacillus amylovorus GRL 1118]
Length = 268
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 47/214 (21%)
Query: 36 MPEYHFIYVADDVGFPYGNW--ED--HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI 91
+P +++ D+ PYGN ED + ++ + FL ++ + L + ACNTA
Sbjct: 26 LPNESTVFIGDNAHMPYGNRTKEDIINLTRRSVKFLLNNDVK-----LVIFACNTA---- 76
Query: 92 KDELRSTFPSMAFLGAVPA--IKQAAAYTQSGLISILSTPATLRRTYTSNLI----HSYV 145
+ A +G + Q QSG ++ T + + + H+Y
Sbjct: 77 ---------TAAAMGTIEKEIEPQIIGVIQSGALAASRTTKNKKVAVVATSVTVGSHAYE 127
Query: 146 SQCH-------IHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ H + +++ LA V EE+A +K+ ++ +GK D +
Sbjct: 128 KEIHFRDPEIEVTELATPKLAPLVEAQEEHATNLKV--------VKESLAPLKGKDFDTL 179
Query: 196 VLACTHYPLIVHVFRQ-LSPWPVDWLDNSDSIAR 228
VL CTHYPLI F++ + V LD +D +A+
Sbjct: 180 VLGCTHYPLIEQEFKEAIDDENVTILDPADQVAQ 213
>gi|288921254|ref|ZP_06415538.1| glutamate racemase [Frankia sp. EUN1f]
gi|288347344|gb|EFC81637.1| glutamate racemase [Frankia sp. EUN1f]
Length = 277
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 18/199 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG V + + +P +++ + PYG ++ +LD
Sbjct: 6 IGVFDSGVGGRTVARAIGDRLPARPLLHLGETANAPYGPQPGAEVRP----PAPAVLD-- 59
Query: 76 QPV-----LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
QPV L VIA N+A + R + VP +A A T+SG + ++ T A
Sbjct: 60 QPVAAGVKLLVIAGNSAGAACLRDARERYDVPVVEVIVPTTCRAVAATRSGRVGVVGTVA 119
Query: 131 T-LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T R Y S S + V+ + V E GI E+ E +
Sbjct: 120 TNASRAYEDAF--SAASGTELVSVACPAFGAFVVE---GITSGR-ELLGLTEAYRAPLQE 173
Query: 190 KRTDVIVLACTHYPLIVHV 208
D ++L CT YPL+ V
Sbjct: 174 ADVDTVILGCTRYPLLTGV 192
>gi|161870616|ref|YP_001599789.1| glutamate racemase [Neisseria meningitidis 053442]
gi|161596169|gb|ABX73829.1| glutamate racemase [Neisseria meningitidis 053442]
gi|325198860|gb|ADY94316.1| glutamate racemase [Neisseria meningitidis G2136]
Length = 239
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 40 HFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF 99
+ IY D PYG ++ M + D L ++ VIACNT + ++R
Sbjct: 3 NIIYFGDTARVPYGTKSKATIENFSMQIV-DFLLEHDVKAMVIACNTIAAVAGQKIRQKT 61
Query: 100 PSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMIL 158
+M L + A +AA A T++ I I++T T+ + IH + ++ +L
Sbjct: 62 GNMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLL 121
Query: 159 ASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
VEE ++ + + ++ + D +VL CTH+PL+
Sbjct: 122 VPLVEEGWLEHEVTRLTVCEYLKPLLADG----IDTLVLGCTHFPLL 164
>gi|152991198|ref|YP_001356920.1| glutamate racemase [Nitratiruptor sp. SB155-2]
gi|166231046|sp|A6Q504|MURI_NITSB RecName: Full=Glutamate racemase
gi|151423059|dbj|BAF70563.1| glutamate racemase [Nitratiruptor sp. SB155-2]
Length = 253
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 27/198 (13%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V++ + IY D PYG + + + R + +
Sbjct: 5 VFDSGVGGLTVVKSLLEHGLFDEIIYFGDTARVPYGPKDKNTII-RYSLEAQEFFKNFDV 63
Query: 78 VLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ + ACN+ +ELRS +FP + + Q I ++ T AT+
Sbjct: 64 DILITACNSVSAHAIEELRSNASFPVIGVIEPGVLALQNRGLDPKSQILVIGTQATIGSG 123
Query: 136 YTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK------ 187
L+ H Y + ILA + + I E+EI EG +E
Sbjct: 124 KYQKLLREHGY----------NNILAKATPLF---VPIVEEEI---FEGPVLEATLQHYF 167
Query: 188 EGKRTDVIVLACTHYPLI 205
+ D I+L CTH+PLI
Sbjct: 168 DSLHPDAIILGCTHFPLI 185
>gi|255532930|ref|YP_003093302.1| Asp/Glu/hydantoin racemase [Pedobacter heparinus DSM 2366]
gi|255345914|gb|ACU05240.1| Asp/Glu/hydantoin racemase [Pedobacter heparinus DSM 2366]
Length = 508
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 79/199 (39%), Gaps = 50/199 (25%)
Query: 16 ILIFDSGIGGLIVLQKM----------RFL----MPEY---HFIYVADDVGFPYGNWEDH 58
I +FDSG GGL +L + +F +P++ FIY+AD PYGN+
Sbjct: 60 IGVFDSGTGGLTILNTLVQFDQHNNATKFAGKDNIPDFAKEKFIYLADQANMPYGNYYSE 119
Query: 59 A--------LKKRLMFLFSDIL-----------DKYQPVLSVIACNTAFT----LIKDEL 95
+ K FL SD DK + VIACNTA I+D +
Sbjct: 120 KKNDLLVEHIIKDAQFLLSDKYYLNNTTKNYSSDKQKVKAIVIACNTATAYGKEYIEDFI 179
Query: 96 RSTFPSMAFLGAVPAIKQAA----AYTQSGLISILSTPATLRRTYTSNLIHS------YV 145
++T ++ +G + A Q ++G I + +T T+ N I + Y
Sbjct: 180 KTTGINLKVIGVIDAGAQGTLDVFKKDENGSIGVFATVGTIASKGYENTILALKDKLGYK 239
Query: 146 SQCHIHLVSSMILASRVEE 164
++ LA V+E
Sbjct: 240 GNLQVYNQGGYGLAEAVDE 258
>gi|87303353|ref|ZP_01086141.1| Glutamate racemase [Synechococcus sp. WH 5701]
gi|87282001|gb|EAQ73963.1| Glutamate racemase [Synechococcus sp. WH 5701]
Length = 276
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 15/179 (8%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT- 86
VL++M P+ F+Y+ D PYG+ + + +R+ L + Q ++ACNT
Sbjct: 17 VLRRMLEHHPDLPFVYLGDTARVPYGHRSPNEI-RRIAAEVVGWLREQQVDAVLMACNTT 75
Query: 87 ---AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS 143
AF + + E P + V A+ Q + +L+TPAT +
Sbjct: 76 NALAFDIAEAEAGEGVPVFGLIDCV------ASQLQCQRVGVLATPATASSGAYGRALRQ 129
Query: 144 YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
CH+ + +E+ + ++ +R + IVL CTHY
Sbjct: 130 ADPSCHVIEIGCPAFVPLIEDG----NFADPRLRAAAIAYLEPLLAERVEAIVLGCTHY 184
>gi|194477143|ref|YP_002049322.1| Glutamate racemase [Paulinella chromatophora]
gi|171192150|gb|ACB43112.1| Glutamate racemase [Paulinella chromatophora]
Length = 272
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 45/244 (18%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL ++ P + +IY+ D PYG ++ S + ++
Sbjct: 8 LFDSGVGGLTVLHQVLKRHPNHSYIYLGDTARVPYGERNPREIRSIAGEAISWLRNQQVD 67
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAF-LGAVPA---IKQAAAYTQSGLISILSTPATLR 133
L ++ACNT L D +A + VP I AA ++ + +LST AT
Sbjct: 68 AL-IMACNTTNALAYD--------IALKISGVPVYGLIDSAARCIRAKRVGVLSTAATAA 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE----- 188
+ IH Y SQ ++V E AC + EI G F +
Sbjct: 119 SRAYTLQIHRYSSQ------------TQVIEQACPAFVPLIEI-----GNFQDPRLRIAA 161
Query: 189 --------GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRIN 238
++I+L CTHYPL+ + RQL P + LD + ++++R LL P+
Sbjct: 162 NLYLAPLLAANVEIIMLGCTHYPLLEPLLRQLLPSHIQLLDPARALSKRLDQLLGIPKRT 221
Query: 239 THQT 242
H +
Sbjct: 222 VHNS 225
>gi|254475982|ref|ZP_05089368.1| glutamate racemase [Ruegeria sp. R11]
gi|214030225|gb|EEB71060.1| glutamate racemase [Ruegeria sp. R11]
Length = 269
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG--NWED--HALKKRLMFLFSD 70
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + ED + ++
Sbjct: 2 AVGIFDSGLGGLTVLDAAQRRLPDVDFLYYGDNARAPYGVRDAEDVFQLTNNAVNAMWER 61
Query: 71 ILDKYQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGA-VPAIKQAAAY---------- 117
D L ++ACNT A L + + LG VP I+
Sbjct: 62 GCD-----LVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTEREWGDNSPPRE 116
Query: 118 TQSGLISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
++ +++ +TPAT+ R + L + + S L +E+ G I D +
Sbjct: 117 VETKHVALFATPATVASRAFQRELAFRAIG-VDVEAQSCGGLVDAIED---GDMILADAL 172
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
K + K +L CTHYPL+ F+
Sbjct: 173 VKSHVDALLRKM-PNPQAAILGCTHYPLMEDAFQ 205
>gi|154507589|ref|ZP_02043231.1| hypothetical protein ACTODO_00069 [Actinomyces odontolyticus ATCC
17982]
gi|153797223|gb|EDN79643.1| hypothetical protein ACTODO_00069 [Actinomyces odontolyticus ATCC
17982]
Length = 276
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 10/216 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ IY+ D PYG ++ + ++ +
Sbjct: 6 IGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGPRAIAQVRSLTLSALDELASRG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
L VIACNTA + R + A + V PA +Q+ T++ + ++ T AT
Sbjct: 66 VKAL-VIACNTATAAALADARERYWIDAGIPVVEVITPAARQSVIATRNHHVGVIGTKAT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ S ++ VS + V+ G+ E EI+ +
Sbjct: 125 IQ----SEAYLRALAAVPGLTVSQQACPAFVDFVEAGVTTGE-EIEAVAREYLTPLKEAG 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D ++L CTHYPL+ V ++ V + +S++ A
Sbjct: 180 VDTLILGCTHYPLLTGVIGRIMGERVTLVTSSEATA 215
>gi|293189259|ref|ZP_06607982.1| glutamate racemase [Actinomyces odontolyticus F0309]
gi|292821722|gb|EFF80658.1| glutamate racemase [Actinomyces odontolyticus F0309]
Length = 276
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 10/216 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P+ IY+ D PYG ++ + ++ +
Sbjct: 6 IGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGPRAIAQVRSLTLSALDELASRG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTPAT 131
L VIACNTA + R + A + V PA +Q+ T++ + ++ T AT
Sbjct: 66 VKAL-VIACNTATAAALADARERYWIDAGIPVVEVITPAARQSVIATRNHHVGVIGTKAT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ S ++ VS + V+ G+ E EI+ +
Sbjct: 125 IQ----SEAYLRALAAVPGLTVSQQACPAFVDFVEAGVTTGE-EIEAVAREYLTPLKEAG 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D ++L CTHYPL+ V ++ V + +S++ A
Sbjct: 180 VDTLILGCTHYPLLTGVIGRIMGERVTLVTSSEATA 215
>gi|126726358|ref|ZP_01742199.1| glutamate racemase [Rhodobacterales bacterium HTCC2150]
gi|126704221|gb|EBA03313.1| glutamate racemase [Rhodobacterales bacterium HTCC2150]
Length = 270
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 38/219 (17%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL M+ +P+ F+Y D + PYG + + L + L +
Sbjct: 2 AVGVFDSGLGGLTVLAAMQERLPDQAFVYYGDQINSPYGVRTPDDIYQ-LTAAATHSLWE 60
Query: 75 YQPVLSVIACNT--AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNT A L + + LG + +A Q G
Sbjct: 61 QGCDLVILACNTASAAALRRMQEEGVPKGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE------ 175
+++ +TP+T+ S+ ++ + VE CG + E
Sbjct: 121 NVALFATPSTV------------ASRAFQRELAFRAIGVDVEAQPCGGVVDAIEDGDMML 168
Query: 176 ----IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR 210
++ +E +++ +L CTHYPL+ F+
Sbjct: 169 ADALVRSHVEA--LKRRMPNPHAAILGCTHYPLMQSEFQ 205
>gi|17902530|emb|CAC81005.1| glutamate racemase [Pseudanabaena sp. PCC 6903]
Length = 115
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+++ + I +FDSG+GGL VLQ++ +P +Y D PYG ++
Sbjct: 6 QQEARFPIGVFDSGVGGLTVLQEVHRQLPNESVVYFGDTARLPYGKRS----PAEIIEYV 61
Query: 69 SDILDKYQPV---LSVIACNTAFTLIKDELRSTF 99
+IL Q + ++++ACNT+ L D +R F
Sbjct: 62 YEILHWMQSLEVKMAIMACNTSSALALDVVRPEF 95
>gi|282852140|ref|ZP_06261497.1| glutamate racemase [Lactobacillus gasseri 224-1]
gi|282556704|gb|EFB62309.1| glutamate racemase [Lactobacillus gasseri 224-1]
Length = 241
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 35/231 (15%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD----ILDKYQPVLSVIACNTAFTLI 91
MP I++ D PYG+ K+ ++ L D +L K ++ + CNTA +
Sbjct: 1 MPNESTIFIGDQANMPYGDRS----KEEIISLTRDSVNFLLSKDVKII-IFGCNTATAVA 55
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHI 150
++ P + +G V + AAA T++ ++++ T AT+ HSY+ + I
Sbjct: 56 MSTIKKEIP-LQIIGVVQSGALAAARTTETKNVAVIGTKATVNS-------HSYLKE--I 105
Query: 151 HLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIV 206
I S + +ED EIK+ + + K D +VL CTHYPL+
Sbjct: 106 QYRDPKIQVSEFAQPKLAPLAEEDPAEEIKQAVVSESLAPLKKADYDTLVLGCTHYPLLR 165
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
+ +D +D +A+ +L R LF +G D
Sbjct: 166 KEIVAVVGQDRKIVDPADQVAQYTYNVLRR-----------DGLFAAGNSD 205
>gi|224437846|ref|ZP_03658793.1| glutamate racemase [Helicobacter cinaedi CCUG 18818]
gi|313144294|ref|ZP_07806487.1| glutamate racemase [Helicobacter cinaedi CCUG 18818]
gi|313129325|gb|EFR46942.1| glutamate racemase [Helicobacter cinaedi CCUG 18818]
Length = 246
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 28/231 (12%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-DILDKYQ 76
+FDSGIGGL VL+ + IY D PYG K+ + FS + LD ++
Sbjct: 5 VFDSGIGGLSVLKSLINAKLFDEIIYYGDTARVPYG-----VKDKQTIIRFSLEALDFFK 59
Query: 77 P---VLSVIACNT--AFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPA 130
P + ++ACNT A+ L + + S P + + V A++ T S ++ IL+T A
Sbjct: 60 PHNIDILIVACNTVSAYALEEMQKHSKIPIVGVIEPGVLAVQNKLKDTDSEIL-ILATRA 118
Query: 131 TLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ Y + L + ++ +++ + VEE + E + + + +
Sbjct: 119 TINSGEYETRL--RKIGFWNLKSLATGLFVPLVEE-----GLLEGAVLESVFDYYFSNFT 171
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
I+L CTH+PLI + +N + ++ + TH
Sbjct: 172 NPPKGIILGCTHFPLIADALSA-------YFNNQSVLIHSGEAIVEYLETH 215
>gi|298254110|ref|ZP_06977696.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19A]
Length = 88
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS 97
L + +L K ++ VIACNTA ++ +E+++
Sbjct: 53 YTWQLVNFLLTKDVKMI-VIACNTATAVVWEEIKA 86
>gi|229821218|ref|YP_002882744.1| glutamate racemase [Beutenbergia cavernae DSM 12333]
gi|259509810|sp|C5BY82|MURI_BEUC1 RecName: Full=Glutamate racemase
gi|229567131|gb|ACQ80982.1| glutamate racemase [Beutenbergia cavernae DSM 12333]
Length = 292
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 19/198 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +YV D PYG +++ + + ++
Sbjct: 6 IGIFDSGVGGLTVARAVLDQLPHESVLYVGDTARTPYGPRPIAQVREYSLEILDSLVASG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK-------QAAAYTQSGLISILST 128
L VIACN+A + + R + VP ++ +AAA T++G I ++ T
Sbjct: 66 VKAL-VIACNSASAAMLADARERYEG----DGVPVVEVIRPAVRRAAAATRNGRIGVIGT 120
Query: 129 PATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT+ R Y + Q +H + VE+ + +
Sbjct: 121 RATISSRAYEDAF--AAAPQLQLHTRACPDFVELVEDG----ETSGPAVLASAHAYLDPL 174
Query: 188 EGKRTDVIVLACTHYPLI 205
D +VL CTHYPL+
Sbjct: 175 RDAGVDTLVLGCTHYPLL 192
>gi|163838785|ref|YP_001623190.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
gi|162952261|gb|ABY21776.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
Length = 271
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 28/229 (12%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FD+G+G +++ +R P IY AD FPYG K LF L
Sbjct: 11 IAVFDAGLGSYDIVRALRNHFPAVDLIYFADRASFPYG-------AKSASELFEVALRSC 63
Query: 76 QPVLS------VIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
Q + S +I N + D + + FP LG +P I+ A + + + +L+
Sbjct: 64 QYLNSLGASCVIIGSNAPSVTVLDAVAAQCAFP---VLGVLPPIQVALSSIEPTEVLLLA 120
Query: 128 TPATLRRTYT-SNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
A++ ++ + I+ Q + ++ L VE G + + + F
Sbjct: 121 GAASMTQSQQLQDFINREAGQQAWRVQTAAATKLIDLVE---SGQFVADPSGTVALVAEF 177
Query: 185 IE---KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
++ +EG+ + L+ TH P + F++ +P + + +DS+A A
Sbjct: 178 LDQQRREGQTIGGVTLSSTHLPWLSFAFKEAAP-NLQLFNPADSVALTA 225
>gi|25808693|gb|AAN74473.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKYSKIPIVGVIGPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +VI+L CTH+PLI H
Sbjct: 124 RYYFTPLKILPEVIILGCTHFPLIAH 149
>gi|25808745|gb|AAN74499.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ + N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSSAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLKILPEVVILGCTHFPLIAH 149
>gi|34557207|ref|NP_907022.1| glutamate racemase [Wolinella succinogenes DSM 1740]
gi|34482923|emb|CAE09922.1| GLUTAMATE RACEMASE [Wolinella succinogenes]
Length = 248
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 15/193 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSGIGGL V++ + IY D PYG + + + + + L ++
Sbjct: 5 VFDSGIGGLSVVKSLLDSHAFEEIIYFGDTARVPYGVKDSETIIRYSLEALA-FLREFDI 63
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLG----AVPAIKQAAAYTQSGLISILSTPATLR 133
+ ++ACNTA + LR + +G V A++ S ++ I + T
Sbjct: 64 DMLIVACNTASAHALEALRQA-ADVDVIGVIEPGVLALENRLPDKNSPILVIGTKATTAS 122
Query: 134 RTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y + L H Y HI +++ +L VEE + E ++ + +
Sbjct: 123 GQYPALLKEHGY---THIQSLATGLLVPLVEEGIFHGSLLESALEH-----YFSSLAVKP 174
Query: 193 DVIVLACTHYPLI 205
I+L CTH+PLI
Sbjct: 175 KAIILGCTHFPLI 187
>gi|91200741|emb|CAJ73793.1| hypothetical protein kuste3038 [Candidatus Kuenenia
stuttgartiensis]
Length = 916
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 63/266 (23%)
Query: 1 MKIDNYPCEKKLQNS----ILIFDSGIGGLIVLQKMRFLMP--EYHFIYVADDVGFPYGN 54
M+ N P +KK+++ I IFDSG GG+IV +K+ ++P + D FP+G
Sbjct: 542 MEAKNAP-QKKMKDKKPLIIGIFDSGQGGIIVTEKLNRILPVGNIKLLLFTDKANFPFGQ 600
Query: 55 WED-----------HALKKR-----------------------LMFLFSDILDKYQPVLS 80
H + +R +F++ I+ + V+
Sbjct: 601 KSKEEINDITFRAVHEINERCKTMHQSNGFFYRFIYNTPYFLKTVFIWLGIIPR--DVIV 658
Query: 81 VIACNTAFTLIK-DELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPATLRRTYTS 138
ACNT T++ +LR FP + F+G V + + A + I I+ T T++ S
Sbjct: 659 CFACNTVDTMVNHKKLRIRFPHIQFIGPVKKTLLKINALPKDARIGIIGTVGTIK----S 714
Query: 139 NLIHSYVSQCHIHLVSS-----MILASRVEEYACGIKIKEDEIKKEIEGC-------FIE 186
+ + + H+++ +L+ + + + + K+ E K FI+
Sbjct: 715 GIYEKRIREAGYHVLAKPTPLLAVLSEMLYKKSFDTEEKQKEFYKTARDLIYVNLKEFIK 774
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQL 212
K + LACTHY + + L
Sbjct: 775 K--NTISHLCLACTHYDYLKSTLKDL 798
>gi|261881993|gb|ACY04880.1| glutamate racemase [Helicobacter pylori]
gi|261881995|gb|ACY04881.1| glutamate racemase [Helicobacter pylori]
gi|261882007|gb|ACY04887.1| glutamate racemase [Helicobacter pylori]
gi|261882009|gb|ACY04888.1| glutamate racemase [Helicobacter pylori]
gi|261882011|gb|ACY04889.1| glutamate racemase [Helicobacter pylori]
gi|261882013|gb|ACY04890.1| glutamate racemase [Helicobacter pylori]
gi|261882015|gb|ACY04891.1| glutamate racemase [Helicobacter pylori]
gi|261882019|gb|ACY04893.1| glutamate racemase [Helicobacter pylori]
gi|261882021|gb|ACY04894.1| glutamate racemase [Helicobacter pylori]
gi|261882023|gb|ACY04895.1| glutamate racemase [Helicobacter pylori]
gi|261882025|gb|ACY04896.1| glutamate racemase [Helicobacter pylori]
gi|261882027|gb|ACY04897.1| glutamate racemase [Helicobacter pylori]
gi|261882029|gb|ACY04898.1| glutamate racemase [Helicobacter pylori]
gi|261882031|gb|ACY04899.1| glutamate racemase [Helicobacter pylori]
gi|261882033|gb|ACY04900.1| glutamate racemase [Helicobacter pylori]
gi|261882035|gb|ACY04901.1| glutamate racemase [Helicobacter pylori]
gi|261882037|gb|ACY04902.1| glutamate racemase [Helicobacter pylori]
gi|261882039|gb|ACY04903.1| glutamate racemase [Helicobacter pylori]
gi|261882041|gb|ACY04904.1| glutamate racemase [Helicobacter pylori]
gi|261882043|gb|ACY04905.1| glutamate racemase [Helicobacter pylori]
gi|261882045|gb|ACY04906.1| glutamate racemase [Helicobacter pylori]
gi|261882047|gb|ACY04907.1| glutamate racemase [Helicobacter pylori]
gi|261882049|gb|ACY04908.1| glutamate racemase [Helicobacter pylori]
gi|261882051|gb|ACY04909.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I
Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPI 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150
>gi|25808687|gb|AAN74470.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + +G ++ AIKQ + ++
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKDKNASIL 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 -VLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149
>gi|25808753|gb|AAN74503.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + +G ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIGLLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149
>gi|261882017|gb|ACY04892.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLGA-VPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + +G+ + AIKQ ++ I
Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGSSILAIKQQVK-DKNAPI 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150
>gi|254485925|ref|ZP_05099130.1| putative glutamate racemase [Roseobacter sp. GAI101]
gi|214042794|gb|EEB83432.1| putative glutamate racemase [Roseobacter sp. GAI101]
Length = 189
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V ++ +P+ F+Y+AD PYG + + + D
Sbjct: 2 AVGIFDSGLGGLTVWNAVQAQLPDVEFVYLADSAHAPYGVRTSDDIYNLTVAATQRLFDA 61
Query: 75 YQPVLSVIACNTA 87
L ++ACNTA
Sbjct: 62 GCD-LVILACNTA 73
>gi|326385030|ref|ZP_08206702.1| glutamate racemase [Gordonia neofelifaecis NRRL B-59395]
gi|326196244|gb|EGD53446.1| glutamate racemase [Gordonia neofelifaecis NRRL B-59395]
Length = 220
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 21/196 (10%)
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL-RRTYTS 138
VIACNTA + R + + + + PA+++A T++G I ++ T AT+ R Y
Sbjct: 26 VIACNTASAACLRDARERYAPIPVIEVILPAVRRAVVATKTGRIGVIGTEATIASRAYQD 85
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+ + I V VE GI +I EG + D +VL
Sbjct: 86 SF--AAARDVEITAVPCPRFVDFVER---GIT-SGRQILGLAEGYLEPLQEADVDTLVLG 139
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIAR-------RARCLLPRINTHQTRVFDDHALF 251
CTHYPL+ V + + V + +++ A+ + L P N R F
Sbjct: 140 CTHYPLLSGVVQLVMGDEVTLVSSAEETAKDTFRVLTESDTLHPHTNRQARRQFS----- 194
Query: 252 LSGKPDIAMRRLMQGF 267
+G P+ + R+L F
Sbjct: 195 ATGDPE-SFRKLSTRF 209
>gi|284052422|ref|ZP_06382632.1| glutamate racemase [Arthrospira platensis str. Paraca]
Length = 214
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 16/148 (10%)
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
++ACNT+ L + +RS F + LG + P + AA +Q I +++TPAT
Sbjct: 3 LMACNTSSALALEVVRSEF-DIPILGLILPGAR--AAISQGERIGVIATPATAASNAYRQ 59
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEY----ACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I + V +E+ C ++ + + I+ +R D +
Sbjct: 60 AIQEINPAVQVWQVGCPAFVPLIEQNRIHDPCTLEAAREYLTPLIQ--------QRIDTL 111
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNS 223
+ CTHYP + V R L P V +D +
Sbjct: 112 IYGCTHYPHLAPVLRSLLPAAVKLVDPA 139
>gi|47093489|ref|ZP_00231251.1| glutamate racemase [Listeria monocytogenes str. 4b H7858]
gi|47018107|gb|EAL08878.1| glutamate racemase [Listeria monocytogenes str. 4b H7858]
Length = 211
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 25/204 (12%)
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
VIACNTA ++R + +G + P + A T++ I +L T T+
Sbjct: 14 VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYPT 72
Query: 140 LIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + ++ S VE EY I KK + + + + D ++L
Sbjct: 73 ALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA------KKVVAESLLPLKSTKIDTVIL 126
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---------------THQT 242
CTHYPL+ + V +++ + A LL N T T
Sbjct: 127 GCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRFFTTGST 186
Query: 243 RVFDDHALFLSGKPDIAMRRLMQG 266
++F D A PD+ + + G
Sbjct: 187 QIFKDIAKDWLNMPDMTVEHIKLG 210
>gi|25808677|gb|AAN74465.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT+R N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLKILPEVVILGCTHFPLIAH 149
>gi|30959112|gb|AAO73315.1| glutamate racemase [Helicobacter pylori]
Length = 184
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI H
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAH 149
>gi|261881937|gb|ACY04852.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L
Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILESELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150
>gi|261881929|gb|ACY04848.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI H
Sbjct: 128 FTPLKILPEVIILGCTHFPLIAH 150
>gi|25808737|gb|AAN74495.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILESELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|261881961|gb|ACY04864.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA TL +E++ S P + + ++ AIKQ ++ I
Sbjct: 14 EALDFFKPHKIELLIVACNTASTLALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150
>gi|261881953|gb|ACY04860.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI H
Sbjct: 128 FTPLKILPEVIILGCTHFPLIAH 150
>gi|25808727|gb|AAN74490.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI H
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAH 149
>gi|25808691|gb|AAN74472.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + S +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVSLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149
>gi|207110490|ref|ZP_03244652.1| glutamate racemase [Helicobacter pylori HPKX_438_CA4C1]
Length = 87
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG +D K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGT-KDPTTIKQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELR 96
Q L ++ACNTA L +E++
Sbjct: 62 QIELLIVACNTASALALEEMQ 82
>gi|25808673|gb|AAN74463.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVA-NKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808639|gb|AAN74446.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ A ++ ++ +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKKAPIL-VL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808667|gb|AAN74460.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ ST P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSTIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|255030221|ref|ZP_05302172.1| glutamate racemase [Listeria monocytogenes LO28]
Length = 96
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTA 87
+D+ +L VIACNTA
Sbjct: 61 VDRGIKML-VIACNTA 75
>gi|25808669|gb|AAN74461.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ ST P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSTIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808683|gb|AAN74468.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALGEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT+R N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149
>gi|25808759|gb|AAN74506.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 16/142 (11%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISI 125
D +Q L V+ACNTA L +E++ F + +G + AIKQ ++ I +
Sbjct: 16 DFFKPHQIKLLVVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILV 73
Query: 126 LSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 74 LGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRY 125
Query: 184 FIEKEGKRTDVIVLACTHYPLI 205
+ +VI+L CTH+PLI
Sbjct: 126 YFTPLKILPEVIILGCTHFPLI 147
>gi|25808715|gb|AAN74484.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT+R N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIRSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149
>gi|261881951|gb|ACY04859.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 16/142 (11%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP----AIKQAAAYTQSGLISI 125
D +Q L V+ACNTA L +E++ F + +G + AIKQ ++ I +
Sbjct: 17 DFFKPHQIKLLVVACNTASALALEEMQKHF-KIPIVGVIEPSILAIKQQVK-DKNAPILV 74
Query: 126 LSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 75 LGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRY 126
Query: 184 FIEKEGKRTDVIVLACTHYPLI 205
+ +VI+L CTH+PLI
Sbjct: 127 YFTPLKILPEVIILGCTHFPLI 148
>gi|46404909|gb|AAS93325.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 23/155 (14%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE------IKKEIEGCFIEKEGKRTD 193
S + + I L++ + +V AC + I E KK + G GK D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYGSLAPLVGK-ID 106
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 107 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|284051284|ref|ZP_06381494.1| glutamate racemase [Arthrospira platensis str. Paraca]
Length = 76
Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53
K I IFDSG+GGL VL+++ +P +Y AD PYG
Sbjct: 5 KRGQKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYG 47
>gi|25808649|gb|AAN74451.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + SY++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQSYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|261882003|gb|ACY04885.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNAPI 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 125 RYYFTPLKILPEVVILGCTHFPLIAH 150
>gi|25808689|gb|AAN74471.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIGLLIVACNTASALALGEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 127 FTPLEILPEVVILGCTHFPLIAH 149
>gi|261881957|gb|ACY04862.1| glutamate racemase [Helicobacter pylori]
gi|261881959|gb|ACY04863.1| glutamate racemase [Helicobacter pylori]
gi|261881963|gb|ACY04865.1| glutamate racemase [Helicobacter pylori]
gi|261881965|gb|ACY04866.1| glutamate racemase [Helicobacter pylori]
gi|261881967|gb|ACY04867.1| glutamate racemase [Helicobacter pylori]
gi|261881969|gb|ACY04868.1| glutamate racemase [Helicobacter pylori]
gi|261881971|gb|ACY04869.1| glutamate racemase [Helicobacter pylori]
gi|261881973|gb|ACY04870.1| glutamate racemase [Helicobacter pylori]
gi|261881977|gb|ACY04872.1| glutamate racemase [Helicobacter pylori]
gi|261881979|gb|ACY04873.1| glutamate racemase [Helicobacter pylori]
gi|261881983|gb|ACY04875.1| glutamate racemase [Helicobacter pylori]
gi|261882005|gb|ACY04886.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150
>gi|261881989|gb|ACY04878.1| glutamate racemase [Helicobacter pylori]
gi|261881991|gb|ACY04879.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ + ++
Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL 73
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 74 -VLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150
>gi|12055941|emb|CAC21088.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++T + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKATL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|25808713|gb|AAN74483.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149
>gi|25808699|gb|AAN74476.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149
>gi|25808711|gb|AAN74482.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ + ++
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 -VLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149
>gi|25808703|gb|AAN74478.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQDYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLKILPEVVILGCTHFPLIAH 149
>gi|25808707|gb|AAN74480.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149
>gi|25808695|gb|AAN74474.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQDYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLKILPEVVILGCTHFPLIAH 149
>gi|198385963|gb|ACH86244.1| glutamate racemase [Streptococcus canis]
gi|198385965|gb|ACH86245.1| glutamate racemase [Streptococcus canis]
gi|209486169|gb|ACI48540.1| glutamate racemase [Streptococcus canis]
Length = 146
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTITSDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ A VE +I KK + GK D +VL CTH
Sbjct: 60 QLLAPSVTVTSLACPKFAPIVESN----EIHSSVAKKVVYKSLAPLVGK-VDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228
YPL+ + + + V +D+ R
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|198250339|gb|ACH85186.1| glutamate racemase [Streptococcus canis]
Length = 146
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTITSDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ A VE +I KK + GK D +VL CTH
Sbjct: 60 QLLAPSVTVTSLACPKFAPIVESN----EIHSSVAKKVVYKSLAPLVGK-VDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228
YPL+ + + + V +D+ R
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|25808761|gb|AAN74507.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFPHLKILPEVVILGCTHFPLIAH 149
>gi|261881975|gb|ACY04871.1| glutamate racemase [Helicobacter pylori]
gi|261881981|gb|ACY04874.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 17/144 (11%)
Query: 72 LDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISI 125
LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +
Sbjct: 16 LDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILV 74
Query: 126 LSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 75 LGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRY 126
Query: 184 FIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 127 YFTPLEILPEVVILGCTHFPLIAH 150
>gi|261881985|gb|ACY04876.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I
Sbjct: 14 EALDFFKPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +VI+L CTH+PLI H
Sbjct: 125 RYYFTPLEILPEVIILGCTHFPLIAH 150
>gi|213579831|ref|ZP_03361657.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 134
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 144 YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP 203
+ ++C I ++ S L E G + +E+++ + E D +VL CTH+P
Sbjct: 2 FANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFP 59
Query: 204 LIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
L+ Q+ P +D+ +IARR LL
Sbjct: 60 LLRDELLQVLPEGTRLVDSGAAIARRTAWLL 90
>gi|284029805|ref|YP_003379736.1| glutamate racemase [Kribbella flavida DSM 17836]
gi|283809098|gb|ADB30937.1| glutamate racemase [Kribbella flavida DSM 17836]
Length = 290
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 10/196 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL V + + +P +Y+ D PYG +++ + +++
Sbjct: 29 IGIFDSGFGGLTVARAVLDQLPHEPILYLGDTARQPYGPKSIAEVREYALECLDHLVEAG 88
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACN+A + + R + +PA ++A A T++ + ++ T R+
Sbjct: 89 VKAL-VIACNSASAAMLRDARERYDVPVVEVILPAARRAVAATRNQRVGVICT-----RS 142
Query: 136 YTSNLIH--SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
++L + ++ + + L ++ V+ G+ + + E E D
Sbjct: 143 TAASLAYDDAFAAAPQVEL-TTQACPKFVDFVESGVTSGPELLAAAHEYLDPLVEAG-VD 200
Query: 194 VIVLACTHYPLIVHVF 209
++L CTHYPL+ V
Sbjct: 201 TLILGCTHYPLLTGVI 216
>gi|25808763|gb|AAN74508.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIK+ A ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVA-NKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808679|gb|AAN74466.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFAPLEILPEVVILGCTHFPLIAH 149
>gi|205355664|ref|ZP_03222434.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346441|gb|EDZ33074.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8421]
Length = 186
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 81 VIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-RTYT 137
+IACNTA D LR+ FP + A A + ++ I +++T AT++ Y
Sbjct: 3 IIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQ 62
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ +I+ +++ + VEE GI + D ++ +E F K D ++L
Sbjct: 63 KRLLSQ--GYTNINALATGLFVPMVEE---GI-FEGDFLQSAMEYYF--KNITTPDALIL 114
Query: 198 ACTHYPLIVHVFRQLSPWPVD 218
ACTH+PL+ R LS + D
Sbjct: 115 ACTHFPLLG---RSLSKYFGD 132
>gi|261882001|gb|ACY04884.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISIL 126
D ++ L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 17 DFFKSHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 128 FTPLEILPEVVILGCTHFPLIAH 150
>gi|25808747|gb|AAN74500.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ VI+L CTH+PLI H
Sbjct: 124 RYYFAPLKILPKVIILGCTHFPLIAH 149
>gi|25808659|gb|AAN74456.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|261881919|gb|ACY04843.1| glutamate racemase [Helicobacter pylori]
gi|261881933|gb|ACY04850.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150
>gi|332755092|gb|EGJ85457.1| asp/Glu/Hydantoin racemase family protein [Shigella flexneri
4343-70]
Length = 230
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 17/172 (9%)
Query: 51 PYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSM 102
PYGN + KK L FL S + L +ACNT + ++ E S +FP
Sbjct: 4 PYGNRSADDIISLTKKMLTFLQSRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-F 57
Query: 103 AFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV 162
L + + Q + I++T T++ LI S ++ S LA +
Sbjct: 58 PILSIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLI 117
Query: 163 EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
EE ++IKK + + I+L CTHYP++ + F ++P
Sbjct: 118 EEGNLNAPAILNDIKKHVNHLI---SLHPVNEIILGCTHYPIVQNFFEAVAP 166
>gi|25808657|gb|AAN74455.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE G ++ E ++
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEESILGGELLETCMRYYFTPLK 131
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
I E VI+L CTH+PLI
Sbjct: 132 ILPE-----VIILGCTHFPLIAQ 149
>gi|25808729|gb|AAN74491.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|46404905|gb|AAS93323.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAATKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ I +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|25808675|gb|AAN74464.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808681|gb|AAN74467.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLKILPEVVILGCTHFPLIAH 149
>gi|25808655|gb|AAN74454.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASIL-VL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808717|gb|AAN74485.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D + +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 16 DFFNPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASIL-VL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 127 FTPLEILPEVVILGCTHFPLIAQ 149
>gi|261881911|gb|ACY04839.1| glutamate racemase [Helicobacter pylori]
gi|261881913|gb|ACY04840.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150
>gi|25808645|gb|AAN74449.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQDYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808635|gb|AAN74444.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L V+ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQLK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808749|gb|AAN74501.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 127 FTPLKILPEVVILGCTHFPLIAQ 149
>gi|261881987|gb|ACY04877.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPI 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ V++L CTH+PLI H
Sbjct: 125 RYYFTPLEILPKVVILGCTHFPLIAH 150
>gi|46404935|gb|AAS93338.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + ++ V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVTGPSVKLIDSGAECVR 141
>gi|25808731|gb|AAN74492.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 16 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASIL-VL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149
>gi|25808771|gb|AAN74512.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808641|gb|AAN74447.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808709|gb|AAN74481.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ V++L CTH+PLI H
Sbjct: 124 RYYFTPLEILPKVVILGCTHFPLIAH 149
>gi|261881997|gb|ACY04882.1| glutamate racemase [Helicobacter pylori]
gi|261881999|gb|ACY04883.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D ++ L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 17 DFFKSHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNTPIL-VL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI H
Sbjct: 128 FTPLEILPEVVILGCTHFPLIAH 150
>gi|25808685|gb|AAN74469.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808663|gb|AAN74458.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|261881943|gb|ACY04855.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150
>gi|25808697|gb|AAN74475.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAH 149
>gi|25808627|gb|AAN74440.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808661|gb|AAN74457.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIK+ A ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVA-NKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNGSHL---ATSLFVPLIEE-----SILEGELVETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
VI+L CTH+PLI
Sbjct: 127 FTPFKILPGVIILGCTHFPLIAQ 149
>gi|25808665|gb|AAN74459.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|33521553|gb|AAQ20064.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 23/155 (14%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE------IKKEIEGCFIEKEGKRTD 193
S + + I L++ + +V AC + I E KK + + GK D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLVPLVGK-ID 106
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 107 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|25808629|gb|AAN74441.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVE-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|33521545|gb|AAQ20060.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKLTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ I +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|261881931|gb|ACY04849.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 128 FTPLEILPEVIILGCTHFPLIAQ 150
>gi|25808769|gb|AAN74511.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLI 205
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLI 147
>gi|238761263|ref|ZP_04622240.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638]
gi|238761516|ref|ZP_04622492.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638]
gi|238700490|gb|EEP93231.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638]
gi|238700743|gb|EEP93483.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638]
Length = 182
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILA 159
S+ +G +P +K A +++ I+IL + + +I + + +C ++ V++ L
Sbjct: 9 SLPVIGILPPVKDACLNSKTKKIAILGVRSMVESPELKRYIIENTIEECDVYGVNASELV 68
Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGK---RTDVIVLACTHYPLIVHVFRQLSPWP 216
+ VE+++ + E ++ F+EK + DVI L+ TH P + F P
Sbjct: 69 NLVEDFSFR---NDKEKTQQSVSLFLEKLLEIYPNIDVITLSSTHLPWLKEFFLNAQPHI 125
Query: 217 VDWLDNSDSIARRAR 231
+ +LD SD + R
Sbjct: 126 I-FLDPSDKVIEGIR 139
>gi|25808643|gb|AAN74448.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808633|gb|AAN74443.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808765|gb|AAN74509.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149
>gi|261881915|gb|ACY04841.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-EKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150
>gi|12055951|emb|CAC21093.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ I +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRSIIQNVMGPSVKLIDSGAECVR 141
>gi|25808735|gb|AAN74494.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|32265523|ref|NP_859555.1| glutamate racemase [Helicobacter hepaticus ATCC 51449]
gi|32261571|gb|AAP76621.1| glutamate racemase [Helicobacter hepaticus ATCC 51449]
Length = 247
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS-DILDKYQ 76
+FDSG+GGL VL+ + IY D PYG K+ + FS L+ +
Sbjct: 5 VFDSGVGGLSVLKSLINAKLFEDIIYYGDTARVPYG-----VKDKQTIIKFSLQALEFFT 59
Query: 77 PV---LSVIACNT--AFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPA 130
P + ++ACNT A+ L + + S P + + V A++ T S ++ I++T A
Sbjct: 60 PHNIDILIVACNTVSAYALQEMQKHSKIPIVGVIEPGVLAVQNNLKDTDSEIL-IIATRA 118
Query: 131 TLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ Y + L + + ++ +++ + VEE + E + + + +
Sbjct: 119 TINSGEYETRLRN--IGFWNLKSLATGLFVPIVEE-----GLLEGAVLESVFHHYFASIT 171
Query: 190 KRTDVIVLACTHYPLI 205
++L CTH+PLI
Sbjct: 172 TPPQAVILGCTHFPLI 187
>gi|261881955|gb|ACY04861.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ +IKQ ++ I
Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILSIKQQVK-DKNAPI 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI H
Sbjct: 125 RYYFTPLEILPEVVILGCTHFPLIAH 150
>gi|261881941|gb|ACY04854.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150
>gi|46404907|gb|AAS93324.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + I+ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGIIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|12055937|emb|CAC21086.1| glutamate racemase [Streptococcus pyogenes]
gi|12055955|emb|CAC21095.1| glutamate racemase [Streptococcus pyogenes]
gi|12055973|emb|CAC21110.1| glutamate racemase [Streptococcus pyogenes]
gi|46404903|gb|AAS93322.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ I +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|25808647|gb|AAN74450.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149
>gi|110806389|ref|YP_689909.1| hypothetical protein SFV_2500 [Shigella flexneri 5 str. 8401]
gi|110615937|gb|ABF04604.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 230
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 17/172 (9%)
Query: 51 PYGNWEDHAL----KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSM 102
PYGN + KK L FL S + L +ACNT + ++ E S +FP
Sbjct: 4 PYGNRSADDIISLTKKMLTFLQSRNVK-----LVAVACNTISSTLESEEYSGYAKSFP-F 57
Query: 103 AFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV 162
L + + Q + I++T T++ LI S ++ S LA +
Sbjct: 58 PILSIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLI 117
Query: 163 EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
EE + IKK + + I+L CTHYP++ + F ++P
Sbjct: 118 EEGNLNAPAILNNIKKHVNHLI---SLHPVNEIILGCTHYPIVQNFFEAVAP 166
>gi|25808739|gb|AAN74496.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808625|gb|AAN74439.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149
>gi|25808619|gb|AAN74436.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149
>gi|25808725|gb|AAN74489.1| glutamate racemase [Helicobacter pylori]
gi|25808757|gb|AAN74505.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|261881935|gb|ACY04851.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNAMKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 128 FTPLKILPEVIILGCTHFPLIAQ 150
>gi|227873306|ref|ZP_03991571.1| possible glutamate racemase [Oribacterium sinus F0268]
gi|227840873|gb|EEJ51238.1| possible glutamate racemase [Oribacterium sinus F0268]
Length = 144
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
IVL CTH+P + ++ P+PV + D ++ A+ R L + V + S
Sbjct: 66 IVLGCTHFPFVKEQIQKALPYPVQFFDGAEGTAKETRHRLEERGLLKEGVQKGEVVLFSS 125
Query: 255 KPDIAMRRLMQGF 267
D + LM+ F
Sbjct: 126 NEDSS---LMEAF 135
>gi|12055935|emb|CAC21085.1| glutamate racemase [Streptococcus pyogenes]
gi|12055939|emb|CAC21087.1| glutamate racemase [Streptococcus pyogenes]
gi|12055949|emb|CAC21092.1| glutamate racemase [Streptococcus pyogenes]
gi|12055967|emb|CAC21107.1| glutamate racemase [Streptococcus pyogenes]
gi|14475673|gb|AAK62686.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|14475679|gb|AAK62689.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|46404931|gb|AAS93336.1| glutamate racemase [Streptococcus pyogenes]
gi|46404933|gb|AAS93337.1| glutamate racemase [Streptococcus pyogenes]
gi|115394063|gb|ABI97001.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ I +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|25808621|gb|AAN74437.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASIL-VL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 127 FTPLEILPEVVILGCTHFPLIAQ 149
>gi|46404911|gb|AAS93326.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGRSVKLIDSGAECVR 141
>gi|46404919|gb|AAS93330.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKLTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|46404929|gb|AAS93335.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGSSVKLIDSGAECVR 141
>gi|25808719|gb|AAN74486.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 127 FTPLKILPEVVILGCTHFPLIAQ 149
>gi|261881907|gb|ACY04837.1| glutamate racemase [Helicobacter pylori]
gi|261881909|gb|ACY04838.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASIL-VL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNISHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 128 FTPLEILPEVVILGCTHFPLIAQ 150
>gi|33521555|gb|AAQ20065.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ I +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|12055945|emb|CAC21090.1| glutamate racemase [Streptococcus pyogenes]
gi|12055959|emb|CAC21097.1| glutamate racemase [Streptococcus pyogenes]
gi|12055971|emb|CAC21109.1| glutamate racemase [Streptococcus pyogenes]
gi|46404913|gb|AAS93327.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|261881947|gb|ACY04857.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 17 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 128 FTPLKILPEVVILGCTHFPLIAQ 150
>gi|12055977|emb|CAC21112.1| glutamate racemase [Streptococcus pyogenes]
gi|46404923|gb|AAS93332.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ I +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|261881945|gb|ACY04856.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFLG-AVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+V++L CTH+PLI
Sbjct: 128 FTPLEILPEVVILGCTHFPLIAQ 150
>gi|167044446|gb|ABZ09122.1| putative Asp/Glu/hydantoin racemase [uncultured marine
crenarchaeote HF4000_APKG6D9]
Length = 253
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+G L ++++++ + + IY AD +PYG L + + ++
Sbjct: 4 IAVFDSGLGSLSIIKEIQ-KITKSEIIYFADQKNYPYGRKSQAQLSIIIQKTVKLLEKEF 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + V+A NT +L+ D + + P +K A T++ I IL+T + +
Sbjct: 63 APEIIVVASNTP-SLMLD-----LSTQKIVDVKPPLKIAKKITKTKQIGILATKSAINSK 116
Query: 136 YTSNLI--HSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKEGKR 191
S I +++ I ++ L VE ++ K + IKK++E +
Sbjct: 117 GLSEYIRKNNFSKSFKIFKINGSNLIDLVESGKFLTDKKYCREIIKKDLEIL----SQQS 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
D I L+ TH + + ++ P + ++D+ +A++
Sbjct: 173 IDTITLSSTHLIFLKSLLKKEFP-KIKFIDSGKIVAQK 209
>gi|46404917|gb|AAS93329.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPRFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|25808671|gb|AAN74462.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTLLEILPEVIILGCTHFPLIAQ 149
>gi|12055957|emb|CAC21096.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|14475689|gb|AAK62694.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228
YPL+ + + + V +D+ R
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|12055979|emb|CAC21113.1| glutamate racemase [Streptococcus pyogenes]
gi|14475677|gb|AAK62688.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ I +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSI---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|12055943|emb|CAC21089.1| glutamate racemase [Streptococcus pyogenes]
gi|12055947|emb|CAC21091.1| glutamate racemase [Streptococcus pyogenes]
gi|12055953|emb|CAC21094.1| glutamate racemase [Streptococcus pyogenes]
gi|12055969|emb|CAC21108.1| glutamate racemase [Streptococcus pyogenes]
gi|14475675|gb|AAK62687.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|33521547|gb|AAQ20061.1| glutamate racemase [Streptococcus pyogenes]
gi|33521551|gb|AAQ20063.1| glutamate racemase [Streptococcus pyogenes]
gi|33521557|gb|AAQ20066.1| glutamate racemase [Streptococcus pyogenes]
gi|46404925|gb|AAS93333.1| glutamate racemase [Streptococcus pyogenes]
gi|115394071|gb|ABI97005.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|14475695|gb|AAK62697.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228
YPL+ + + + V +D+ R
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|261881939|gb|ACY04853.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 17 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 128 FTLLEILPEVIILGCTHFPLIAQ 150
>gi|14475681|gb|AAK62690.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|14475683|gb|AAK62691.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|14475691|gb|AAK62695.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228
YPL+ + + + V +D+ R
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|198385967|gb|ACH86246.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis]
gi|209486171|gb|ACI48541.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis]
Length = 146
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVTSLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228
YPL+ + + + V +D+ R
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|25808755|gb|AAN74504.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTLLEILPEVIILGCTHFPLIAQ 149
>gi|213850149|ref|ZP_03381047.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 130
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+C I ++ S L E G + +E+++ + E D +VL CTH+PL+
Sbjct: 1 ECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFPLLR 58
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLL 234
Q+ P +D+ +IARR LL
Sbjct: 59 DELLQVLPEGTRLVDSGAAIARRTAWLL 86
>gi|25808623|gb|AAN74438.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIKQ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I + E+ + +
Sbjct: 75 GTKATIQSNAYDNALKRQGYLNVSHL---ATSLFVPLIEE-----SILDGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|12055965|emb|CAC21103.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSSLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|14475693|gb|AAK62696.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 13/152 (8%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D R A C+
Sbjct: 115 YPLLRPIIQNVMGPSVKLID------RGAECV 140
>gi|25808631|gb|AAN74442.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808721|gb|AAN74487.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L
Sbjct: 16 DFFKPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|12055933|emb|CAC21084.1| glutamate racemase [Streptococcus pyogenes]
gi|12055963|emb|CAC21101.1| glutamate racemase [Streptococcus pyogenes]
gi|12055975|emb|CAC21111.1| glutamate racemase [Streptococcus pyogenes]
gi|46404921|gb|AAS93331.1| glutamate racemase [Streptococcus pyogenes]
gi|46404927|gb|AAS93334.1| glutamate racemase [Streptococcus pyogenes]
gi|115394065|gb|ABI97002.1| glutamate racemase [Streptococcus pyogenes]
gi|115394067|gb|ABI97003.1| glutamate racemase [Streptococcus pyogenes]
gi|115394069|gb|ABI97004.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|25808751|gb|AAN74502.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L
Sbjct: 16 DFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLEILPEVIILGCTHFPLIAQ 149
>gi|46404915|gb|AAS93328.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 TSDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|14475687|gb|AAK62693.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVVSLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228
YPL+ + + + V +D+ R
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|126728656|ref|ZP_01744471.1| Glutamate racemase [Sagittula stellata E-37]
gi|126710586|gb|EBA09637.1| Glutamate racemase [Sagittula stellata E-37]
Length = 251
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 81/189 (42%), Gaps = 20/189 (10%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P+ F+Y AD PYG + + + S + D+ L V+ACNTA +
Sbjct: 4 LPDVPFVYFADSAHAPYGVRDANDIYDLTTQAVSRLWDEGCD-LVVLACNTASAAALRRM 62
Query: 96 RSTF--PSMAFLGAVPAIKQAAAYTQSG-----------LISILSTPATLR-RTYTSNLI 141
+ ++ LG + +A Q G +++ +TPAT+R R + L
Sbjct: 63 QESWVPRDKRVLGVFVPLIEALTARQWGDNSPPREVGIQHVALFATPATVRSRAFQRELA 122
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ + + L +EE + + E ++ ++ ++++ + +L CTH
Sbjct: 123 FRAIG-VDVEAQACGGLVDAIEE--GDMILAEALVRSHVDA--LKRKMPTPEAAILGCTH 177
Query: 202 YPLIVHVFR 210
YPL+ +F+
Sbjct: 178 YPLMQDIFQ 186
>gi|12055961|emb|CAC21098.1| glutamate racemase [Streptococcus pyogenes]
gi|33521549|gb|AAQ20062.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T +
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMT---------V 50
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACG--IKIKEDE-----IKKEIEGCFIEKEGKRTDV 194
S + + I L++ + +V AC + I E I K+I + + D
Sbjct: 51 ASDIYRKKIQLLAPSV---QVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDT 107
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+VL CTHYPL+ + + + V +D+ R
Sbjct: 108 LVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|25808653|gb|AAN74453.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNT L +E++ S P + + ++ AIKQ + ++ +L
Sbjct: 16 DFFKPHQIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASIL-VL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLI 205
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLI 147
>gi|14475685|gb|AAK62692.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|198385961|gb|ACH86243.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis]
Length = 146
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 7/147 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVISLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIAR 228
YPL+ + + + V +D+ R
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVR 141
>gi|330904118|gb|EGH34690.1| glutamate racemase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 44
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVAD 46
IFDSG+GGL VL ++R L+P +Y+AD
Sbjct: 16 IFDSGVGGLSVLNEVRQLLPSESLLYLAD 44
>gi|25808637|gb|AAN74445.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIK+ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + SY++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQSYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +VI+L CTH+PLI
Sbjct: 124 RYYFTPLKILPEVIILGCTHFPLIAQ 149
>gi|261881917|gb|ACY04842.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ + ++
Sbjct: 14 EALDFFKPHEIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNTPIL 73
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 74 -VLGTKATIQSNAYDNALKKQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +VI+L CTH+PLI
Sbjct: 125 RYYFTPLKILPEVIILGCTHFPLIAQ 150
>gi|25808767|gb|AAN74510.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ + ++
Sbjct: 13 EALDFFKPHEIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNTPIL 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 -VLGTKATIQSNAYDNALKKQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +VI+L CTH+PLI
Sbjct: 124 RYYFTPLKILPEVIILGCTHFPLIAQ 149
>gi|7671531|emb|CAB89281.1| hypothetical protein [Clostridium cellulolyticum H10]
Length = 125
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
IKK+++G + VL CTH+P+ ++ F+++ P +D +D S+ R + LL
Sbjct: 31 IKKKLDGYNL----NNYKTFVLGCTHFPIYINAFKEVLPPFIDIIDGSEGTIRYLKLLLE 86
Query: 236 RINTHQTRVFDDHALFL-SGK 255
+ T + + +F SG+
Sbjct: 87 ERHLISTNINGGNIVFFDSGR 107
>gi|261881949|gb|ACY04858.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIKQ ++ I
Sbjct: 14 EALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI
Sbjct: 125 RYYFTPLKILPEVVILGCTHFPLIAQ 150
>gi|309807427|ref|ZP_07701390.1| glutamate racemase domain protein [Lactobacillus iners LactinV
01V1-a]
gi|308169349|gb|EFO71404.1| glutamate racemase domain protein [Lactobacillus iners LactinV
01V1-a]
Length = 94
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN 54
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGD 44
>gi|25808701|gb|AAN74477.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLI 205
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLI 147
>gi|261881927|gb|ACY04847.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L
Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
VI+L CTH+PLI
Sbjct: 128 FAPLKILPKVIILGCTHFPLIAQ 150
>gi|261881923|gb|ACY04845.1| glutamate racemase [Helicobacter pylori]
gi|261881925|gb|ACY04846.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L
Sbjct: 17 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 75
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 76 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 127
Query: 185 IEKEGKRTDVIVLACTHYPLI 205
VI+L CTH+PLI
Sbjct: 128 FAPLKILPKVIILGCTHFPLI 148
>gi|25808733|gb|AAN74493.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808651|gb|AAN74452.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVK-DKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLIVH 207
+VI+L CTH+PLI
Sbjct: 127 FTPLKILPEVIILGCTHFPLIAQ 149
>gi|25808723|gb|AAN74488.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
D +Q L ++ACNTA L +E++ S P + + ++ AIK+ ++ I +L
Sbjct: 16 DFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPILVL 74
Query: 127 STPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T AT++ N + Y++ H+ ++ + +EE I E E+ + +
Sbjct: 75 GTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCMRYY 126
Query: 185 IEKEGKRTDVIVLACTHYPLI 205
VI+L CTH+PLI
Sbjct: 127 FAPLKILPKVIILGCTHFPLI 147
>gi|25808743|gb|AAN74498.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 17/144 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L +E++ S P + + ++ AIK+ ++ I
Sbjct: 13 EALDFFKPHEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVE-NKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205
+ +VI+L CTH+PLI
Sbjct: 124 RYYFTPLKILPEVIILGCTHFPLI 147
>gi|54026948|ref|YP_121190.1| hypothetical protein nfa49740 [Nocardia farcinica IFM 10152]
gi|54018456|dbj|BAD59826.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 441
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 216 PVDWLDNSDSI-ARRARCLLPRINTH--QTRVFDDHALFLSGKPDI 258
PV W+D+ D+I A LL RI H + RVFD HA L G+P +
Sbjct: 222 PVTWVDSPDAITAAEIEALLTRIPAHSRRGRVFDAHAPLLRGQPSL 267
>gi|25808705|gb|AAN74479.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNTA L E++ S P + + ++ AIKQ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAIKQQVK-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----NILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +V++L CTH+PLI
Sbjct: 124 RYYFTPLEILPEVVILGCTHFPLIAQ 149
>gi|167647143|ref|YP_001684806.1| aspartate racemase [Caulobacter sp. K31]
gi|167349573|gb|ABZ72308.1| aspartate racemase [Caulobacter sp. K31]
Length = 220
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 18/152 (11%)
Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
IACNTA S P + + +A + G++ A RRT++ I
Sbjct: 77 IACNTAHAYADQVRASGLPLVDLIETAGLAAKADGAQRVGVLGTGGALALYRRTFSHLGI 136
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI---KKEIEGCFIEK-EGKRTDVIVL 197
+ H +VE A +IK ++ +E + GK V+V
Sbjct: 137 EAVTLDDH----------EQVEFMALLYRIKHGDVGPASRETMAALAHRLVGKGAQVVVA 186
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
CT PL++ S V ++D ++++ARR
Sbjct: 187 GCTEVPLVMSA----SDLTVPFIDATEALARR 214
>gi|239932810|ref|ZP_04689763.1| glutamate racemase [Streptomyces ghanaensis ATCC 14672]
Length = 98
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L ++R L P+ + D G P+G L R + + +
Sbjct: 22 IALMDSGIGLLAATAEVRRLRPDADLVLSLDPDGMPWGPRTPEDLTGRALAVAE-AAAAH 80
Query: 76 QPVLSVIACNTA 87
+P ++ CNTA
Sbjct: 81 RPDALIVGCNTA 92
>gi|225010451|ref|ZP_03700922.1| glutamate racemase [Flavobacteria bacterium MS024-3C]
gi|225005280|gb|EEG43231.1| glutamate racemase [Flavobacteria bacterium MS024-3C]
Length = 143
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/63 (20%), Positives = 37/63 (58%)
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+E+ + ++ + + K D +VL CTHYP ++ +++ ++ +D + ++A++ + +
Sbjct: 27 EEVAEVLKSYLLPMQEKGIDRLVLGCTHYPYLIPAIKKILSSRIEIIDAAGAVAKQTKKV 86
Query: 234 LPR 236
L +
Sbjct: 87 LEK 89
>gi|253687770|ref|YP_003016960.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754348|gb|ACT12424.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 238
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 65 MFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
M + IL+ +I CNTA F +K + R+ S+ + QA + +
Sbjct: 64 MLQYMKILENAGAECIIIPCNTAHYWFNELKQQCRAEMISI-----IDVTCQAIKHANTT 118
Query: 122 LISILSTPATLR-RTYTSNLIHSYV-----SQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +L+T AT++ R Y NLI + + H V I A + + A ++
Sbjct: 119 RVGLLATTATVKARIYQDNLITDNIECFTPNDADQHQVMESIYAYKSGDIAGAYRMLS-P 177
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+K + +EK I+L CT PLI+ +++ P ++D ++ + ++
Sbjct: 178 VKDRLLHAGVEK-------IILGCTELPLILE--QEVKTSPQHYVDATEELIKK 222
>gi|261344626|ref|ZP_05972270.1| putative aspartate racemase [Providencia rustigianii DSM 4541]
gi|282567542|gb|EFB73077.1| putative aspartate racemase [Providencia rustigianii DSM 4541]
Length = 235
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
VI CNTA DEL+ + + L + A TQ I +L+T AT+
Sbjct: 80 VIPCNTAHFWF-DELKKSC-HVEILSIIEATMNEVISTQKNKIGLLATDATMHMGLYQQS 137
Query: 141 IHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
I C + MI+ S + + ED +KK+ + F ++IVL
Sbjct: 138 IEDQGLICIKPDNENQKMIMKSIYLLKSGEFSLAEDIMKKQADILF----SNGAEIIVLG 193
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
CT P+I+ ++ P ++D++ ++ R IN ++ R+
Sbjct: 194 CTEVPVILS--NEVKSHPDKYIDSTGALVRAG------INWYKKRI 231
>gi|227327191|ref|ZP_03831215.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 238
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 29/189 (15%)
Query: 65 MFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
M + IL+ +I CNTA F +K + R+ S+ + QA + +
Sbjct: 64 MLQYMKILENAGAECIIIPCNTAHYWFNDLKQQCRAEMISI-----IDVTCQAIKHANTT 118
Query: 122 LISILSTPATLR-RTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKED 174
+ +L+T AT++ R Y NLI + C+ H V I A + + A +
Sbjct: 119 RVGLLATTATVKARIYQDNLITDNID-CYTPDDADQHQVMESIYAYKSGDIAGAYSLLS- 176
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+K + +EK I+L CT PLI+ +++ P ++D ++ + ++ +
Sbjct: 177 PVKDRLLQAGVEK-------IILGCTELPLILE--QEVRTSPQHYVDATEELIKKT---V 224
Query: 235 PRINTHQTR 243
TH TR
Sbjct: 225 EWYFTHNTR 233
>gi|261881921|gb|ACY04844.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNT L +E++ S P + + ++ AIK+ ++ I
Sbjct: 14 EALDFFKPHKIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPI 72
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 73 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 124
Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205
+ +VI+L CTH+PLI
Sbjct: 125 RYYFTPLKILPEVIILGCTHFPLI 148
>gi|50120438|ref|YP_049605.1| aspartate racemase [Pectobacterium atrosepticum SCRI1043]
gi|49610964|emb|CAG74409.1| probable aspartate racemase [Pectobacterium atrosepticum SCRI1043]
Length = 238
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
M + IL+ +I CNTA +EL+ S + + QA T + +
Sbjct: 64 MLQYMKILENAGAECIIIPCNTAHYWF-NELKQQC-SAEMISIIDVTCQAIRNTNTTRVG 121
Query: 125 ILSTPATLR-RTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKEDEIK 177
+L+T AT++ R Y NLI + +C+ H V I A + + A G +K
Sbjct: 122 LLATTATVKARIYQDNLITDNI-ECYTPDDADQHQVMESIYAYKSGDIA-GAYSMLSPVK 179
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ +EK I+L CT PLI+ ++SP
Sbjct: 180 DRLLQAGVEK-------IILGCTELPLILEQEVRISP 209
>gi|25808741|gb|AAN74497.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 70 DILDKYQP---VLSVIACNTAFTLIKDELR--STFPSMAFL-GAVPAIKQAAAYTQSGLI 123
+ LD ++P L ++ACNT L +E++ S P + + ++ AIK+ ++ I
Sbjct: 13 EALDFFKPHKIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSILAIKRQVE-DKNAPI 71
Query: 124 SILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T AT++ N + Y++ H+ ++ + +EE I E E+ +
Sbjct: 72 LVLGTKATIQSNAYDNALKQQGYLNVSHL---ATSLFVPLIEE-----SILEGELLETCM 123
Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205
+ +VI+L CTH+PLI
Sbjct: 124 RYYFTPLKILPEVIILGCTHFPLI 147
>gi|325123649|gb|ADY83172.1| putative aspartate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 236
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 16/181 (8%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
N ++ L+K +L IL+ Q +I CNTA + T M + ++
Sbjct: 55 NQDNKPLEKMAEYL--KILEAAQVGCIIIPCNTAHFWFNQLQKRTQTKM-----ISIVES 107
Query: 114 AAAYTQSGLIS---ILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A + Q I IL+T AT+ Y S I + + + + +Y G
Sbjct: 108 AVHFIQDSQIDEVCILATSATINTELYQSQFIENSIGFSTPSAEMQNKVMQSIYQYKAGN 167
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ E+ KE+ + KR +LACT PLI+ + +P ++D +D + +
Sbjct: 168 IQQAREMMKEVINFYT---NKRNIKFLLACTEIPLILE--ESIEAYPELFIDTTDVLIKN 222
Query: 230 A 230
A
Sbjct: 223 A 223
>gi|261821065|ref|YP_003259171.1| aspartate racemase [Pectobacterium wasabiae WPP163]
gi|261605078|gb|ACX87564.1| aspartate racemase [Pectobacterium wasabiae WPP163]
Length = 238
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 26/175 (14%)
Query: 65 MFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
M + IL+ +I CNTA F +K + R+ S+ + QA +
Sbjct: 64 MLQYMKILENAGAECIIIPCNTAHYWFNELKQQCRAEMISI-----IDVTCQAIRSANTT 118
Query: 122 LISILSTPATLR-RTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKED 174
+ +L+T AT+ R Y NLI+ + +C+ H V I A + A G
Sbjct: 119 RVGLLATTATVTARIYQDNLINDNI-ECYTPDEADQHQVMESIYAYKSGNIA-GAYSMLS 176
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+K + +EK I+L CT PLI+ +++ P ++D ++ + ++
Sbjct: 177 PVKDRLLQAGVEK-------IILGCTELPLILE--QEIKTTPQHYVDATEELIKK 222
Searching..................................................done
Results from round 2
>gi|254780905|ref|YP_003065318.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62]
gi|254040582|gb|ACT57378.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62]
Length = 271
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL
Sbjct: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS
Sbjct: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI
Sbjct: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH
Sbjct: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS
Sbjct: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
>gi|212638431|ref|YP_002314951.1| glutamate racemase [Anoxybacillus flavithermus WK1]
gi|212559911|gb|ACJ32966.1| Glutamate racemase [Anoxybacillus flavithermus WK1]
Length = 278
Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ +Y+ D PYG +++ + + +
Sbjct: 14 LERPIGVIDSGVGGLTVAKEIMRQLPKEQIVYLGDTARCPYGPRPREEIRQFTWEMTNYL 73
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L Y + VIACNTA + +E+R T ++ +G V P + A T++ I ++ T
Sbjct: 74 L-GYDIKMLVIACNTATAVALEEIRHTL-NIPVIGVVHPGARTALKITKNYHIGVIGTIG 131
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S S I ++ VE + + +E K+ + + +
Sbjct: 132 TVKSGAYEQALKSINSDVKIESLACPKFVPLVESG----QFEGEEAKQIVAESLEPFKDR 187
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
D ++L CTHYPL+ + +Q V + + D AR +L T +H
Sbjct: 188 PIDTLILGCTHYPLLSPLIQQYMGEHVKLICSGDETAREVSTILHHSGLLYTGNKRREHI 247
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G + + + FG
Sbjct: 248 FFTTGSKETFQQIASKWFG 266
>gi|295399429|ref|ZP_06809411.1| glutamate racemase [Geobacillus thermoglucosidasius C56-YS93]
gi|312110012|ref|YP_003988328.1| glutamate racemase [Geobacillus sp. Y4.1MC1]
gi|294978895|gb|EFG54491.1| glutamate racemase [Geobacillus thermoglucosidasius C56-YS93]
gi|311215113|gb|ADP73717.1| glutamate racemase [Geobacillus sp. Y4.1MC1]
Length = 264
Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ +Y+ D PYG + +++ + + +
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKERIVYLGDTARCPYGPRPEEEIRQFTWEMTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + VIACNTA ++ DE+R + LG V P + A T++G I ++ T
Sbjct: 61 L-QYNIKMLVIACNTATAVVLDEIREQL-DIPVLGVVHPGARAALKATKNGHIGVIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + H+ ++ VE + +E KK + +
Sbjct: 119 TVKSGAYEKALKSINPRVHVESLACPKFVPLVESG----NFEGEEAKKIVAESLEPFKSS 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
DV++L CTHYPL+ + ++ V + + D AR +L + T + +H
Sbjct: 175 NMDVLILGCTHYPLLSPLIKEYMGKRVKLICSGDETAREVSAILHHSHLLYTGQRAAEHL 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G ++ + + FG
Sbjct: 235 FFTTGPKELFQKIASKWFG 253
>gi|239827939|ref|YP_002950563.1| glutamate racemase [Geobacillus sp. WCH70]
gi|259509915|sp|C5D5M9|MURI_GEOSW RecName: Full=Glutamate racemase
gi|239808232|gb|ACS25297.1| glutamate racemase [Geobacillus sp. WCH70]
Length = 264
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 61/259 (23%), Positives = 119/259 (45%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ +Y+ D PYG +++ + + +
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKERIVYLGDTARCPYGPRPKEEIRQFTWEMTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + VIACNTA ++ DE+R + LG V P + A T++G I ++ T
Sbjct: 61 L-RYNIKMLVIACNTATAVVLDEIREQL-DIPVLGVVHPGARAALKATKNGHIGVIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + + ++ VE + +E +K + +
Sbjct: 119 TVKSGAYEKALKSINHRVRVESLACPKFVPLVESG----NFEGEEARKIVAESLEPFKSS 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
DV++L CTHYPL+ + ++ V + + D AR +L + T + +H
Sbjct: 175 NMDVLILGCTHYPLLSPLIKEYMGKRVKLICSGDETAREVSAILHHSHLLYTGQREAEHL 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G ++ + + FG
Sbjct: 235 FFTTGSKELFQKIASKWFG 253
>gi|163843460|ref|YP_001627864.1| glutamate racemase [Brucella suis ATCC 23445]
gi|189030357|sp|B0CGZ3|MURI_BRUSI RecName: Full=Glutamate racemase
gi|163674183|gb|ABY38294.1| glutamate racemase [Brucella suis ATCC 23445]
Length = 277
Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats.
Identities = 140/260 (53%), Positives = 191/260 (73%), Gaps = 1/260 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF +
Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T
Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGMVPAIKPAAERTSSGLVSVLATPGT 136
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I CFIEK+GKR
Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A
Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S KPD A+RRLMQGFGL+
Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276
>gi|296331613|ref|ZP_06874082.1| glutamate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305675428|ref|YP_003867100.1| glutamate racemase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296151208|gb|EFG92088.1| glutamate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305413672|gb|ADM38791.1| glutamate racemase [Bacillus subtilis subsp. spizizenii str. W23]
Length = 271
Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 115/259 (44%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
LD + + VIACNTA + ++++ + + +G + P + A T++ I ++ T
Sbjct: 61 LDNHHIKMLVIACNTATAIALEDIQRSV-GIPVVGVIQPGARAAIKVTENQHIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE K ++ +K +
Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVK----TSLYPLKDT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH
Sbjct: 176 SIDTLILGCTHYPILKESIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIVPDHQ 235
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 236 FLTTGARDQFAKIADDWFG 254
>gi|254701935|ref|ZP_05163763.1| glutamate racemase [Brucella suis bv. 5 str. 513]
gi|261752501|ref|ZP_05996210.1| glutamate racemase [Brucella suis bv. 5 str. 513]
gi|261742254|gb|EEY30180.1| glutamate racemase [Brucella suis bv. 5 str. 513]
Length = 277
Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats.
Identities = 139/260 (53%), Positives = 190/260 (73%), Gaps = 1/260 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGN E+ ALK+R++ LF +
Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNREEEALKRRIIELFGEF 76
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T
Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I CFIEK+GKR
Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A
Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S KPD A+RRLMQGFGL+
Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276
>gi|17987078|ref|NP_539712.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|23502072|ref|NP_698199.1| glutamate racemase [Brucella suis 1330]
gi|62290106|ref|YP_221899.1| glutamate racemase [Brucella abortus bv. 1 str. 9-941]
gi|82700029|ref|YP_414603.1| glutamate racemase [Brucella melitensis biovar Abortus 2308]
gi|161619150|ref|YP_001593037.1| glutamate racemase [Brucella canis ATCC 23365]
gi|189024344|ref|YP_001935112.1| glutamate racemase [Brucella abortus S19]
gi|225627664|ref|ZP_03785701.1| glutamate racemase [Brucella ceti str. Cudo]
gi|225852691|ref|YP_002732924.1| glutamate racemase [Brucella melitensis ATCC 23457]
gi|237815612|ref|ZP_04594609.1| glutamate racemase [Brucella abortus str. 2308 A]
gi|254689415|ref|ZP_05152669.1| glutamate racemase [Brucella abortus bv. 6 str. 870]
gi|254693900|ref|ZP_05155728.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya]
gi|254697550|ref|ZP_05159378.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59]
gi|254704480|ref|ZP_05166308.1| glutamate racemase [Brucella suis bv. 3 str. 686]
gi|254706624|ref|ZP_05168452.1| glutamate racemase [Brucella pinnipedialis M163/99/10]
gi|254710266|ref|ZP_05172077.1| glutamate racemase [Brucella pinnipedialis B2/94]
gi|254714263|ref|ZP_05176074.1| glutamate racemase [Brucella ceti M644/93/1]
gi|254717699|ref|ZP_05179510.1| glutamate racemase [Brucella ceti M13/05/1]
gi|254730444|ref|ZP_05189022.1| glutamate racemase [Brucella abortus bv. 4 str. 292]
gi|256031760|ref|ZP_05445374.1| glutamate racemase [Brucella pinnipedialis M292/94/1]
gi|256044845|ref|ZP_05447749.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1]
gi|256061275|ref|ZP_05451425.1| glutamate racemase [Brucella neotomae 5K33]
gi|256113750|ref|ZP_05454554.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether]
gi|256159930|ref|ZP_05457648.1| glutamate racemase [Brucella ceti M490/95/1]
gi|256255161|ref|ZP_05460697.1| glutamate racemase [Brucella ceti B1/94]
gi|256257661|ref|ZP_05463197.1| glutamate racemase [Brucella abortus bv. 9 str. C68]
gi|256263818|ref|ZP_05466350.1| glutamate racemase [Brucella melitensis bv. 2 str. 63/9]
gi|260168894|ref|ZP_05755705.1| glutamate racemase [Brucella sp. F5/99]
gi|260546655|ref|ZP_05822394.1| glutamate racemase [Brucella abortus NCTC 8038]
gi|260565553|ref|ZP_05836037.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|260566276|ref|ZP_05836746.1| glutamate racemase [Brucella suis bv. 4 str. 40]
gi|260754937|ref|ZP_05867285.1| glutamate racemase [Brucella abortus bv. 6 str. 870]
gi|260758153|ref|ZP_05870501.1| glutamate racemase [Brucella abortus bv. 4 str. 292]
gi|260761979|ref|ZP_05874322.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883947|ref|ZP_05895561.1| glutamate racemase [Brucella abortus bv. 9 str. C68]
gi|261214189|ref|ZP_05928470.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya]
gi|261219542|ref|ZP_05933823.1| glutamate racemase [Brucella ceti M13/05/1]
gi|261222358|ref|ZP_05936639.1| glutamate racemase [Brucella ceti B1/94]
gi|261314084|ref|ZP_05953281.1| glutamate racemase [Brucella pinnipedialis M163/99/10]
gi|261317828|ref|ZP_05957025.1| glutamate racemase [Brucella pinnipedialis B2/94]
gi|261322037|ref|ZP_05961234.1| glutamate racemase [Brucella ceti M644/93/1]
gi|261325282|ref|ZP_05964479.1| glutamate racemase [Brucella neotomae 5K33]
gi|261755160|ref|ZP_05998869.1| glutamate racemase [Brucella suis bv. 3 str. 686]
gi|261758384|ref|ZP_06002093.1| glutamate racemase [Brucella sp. F5/99]
gi|265988858|ref|ZP_06101415.1| glutamate racemase [Brucella pinnipedialis M292/94/1]
gi|265991273|ref|ZP_06103830.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1]
gi|265995109|ref|ZP_06107666.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether]
gi|265998323|ref|ZP_06110880.1| glutamate racemase [Brucella ceti M490/95/1]
gi|294852530|ref|ZP_06793203.1| glutamate racemase [Brucella sp. NVSL 07-0026]
gi|297248502|ref|ZP_06932220.1| glutamate racemase [Brucella abortus bv. 5 str. B3196]
gi|54037864|sp|P63632|MURI_BRUSU RecName: Full=Glutamate racemase
gi|54041256|sp|P63631|MURI_BRUME RecName: Full=Glutamate racemase
gi|75496705|sp|Q57CU6|MURI_BRUAB RecName: Full=Glutamate racemase
gi|123547536|sp|Q2YRV4|MURI_BRUA2 RecName: Full=Glutamate racemase
gi|189082953|sp|A9M5L1|MURI_BRUC2 RecName: Full=Glutamate racemase
gi|229486232|sp|B2S641|MURI_BRUA1 RecName: Full=Glutamate racemase
gi|254766109|sp|C0RJG2|MURI_BRUMB RecName: Full=Glutamate racemase
gi|17982736|gb|AAL51976.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|23348029|gb|AAN30114.1| glutamate racemase [Brucella suis 1330]
gi|62196238|gb|AAX74538.1| MurI, glutamate racemase [Brucella abortus bv. 1 str. 9-941]
gi|82616130|emb|CAJ11173.1| Asp/Glu racemase [Brucella melitensis biovar Abortus 2308]
gi|161335961|gb|ABX62266.1| glutamate racemase [Brucella canis ATCC 23365]
gi|189019916|gb|ACD72638.1| Asp/Glu racemase [Brucella abortus S19]
gi|225617669|gb|EEH14714.1| glutamate racemase [Brucella ceti str. Cudo]
gi|225641056|gb|ACO00970.1| glutamate racemase [Brucella melitensis ATCC 23457]
gi|237788910|gb|EEP63121.1| glutamate racemase [Brucella abortus str. 2308 A]
gi|260095705|gb|EEW79582.1| glutamate racemase [Brucella abortus NCTC 8038]
gi|260151621|gb|EEW86715.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|260155794|gb|EEW90874.1| glutamate racemase [Brucella suis bv. 4 str. 40]
gi|260668471|gb|EEX55411.1| glutamate racemase [Brucella abortus bv. 4 str. 292]
gi|260672411|gb|EEX59232.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675045|gb|EEX61866.1| glutamate racemase [Brucella abortus bv. 6 str. 870]
gi|260873475|gb|EEX80544.1| glutamate racemase [Brucella abortus bv. 9 str. C68]
gi|260915796|gb|EEX82657.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya]
gi|260920942|gb|EEX87595.1| glutamate racemase [Brucella ceti B1/94]
gi|260924631|gb|EEX91199.1| glutamate racemase [Brucella ceti M13/05/1]
gi|261294727|gb|EEX98223.1| glutamate racemase [Brucella ceti M644/93/1]
gi|261297051|gb|EEY00548.1| glutamate racemase [Brucella pinnipedialis B2/94]
gi|261301262|gb|EEY04759.1| glutamate racemase [Brucella neotomae 5K33]
gi|261303110|gb|EEY06607.1| glutamate racemase [Brucella pinnipedialis M163/99/10]
gi|261738368|gb|EEY26364.1| glutamate racemase [Brucella sp. F5/99]
gi|261744913|gb|EEY32839.1| glutamate racemase [Brucella suis bv. 3 str. 686]
gi|262552791|gb|EEZ08781.1| glutamate racemase [Brucella ceti M490/95/1]
gi|262766222|gb|EEZ12011.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether]
gi|263002057|gb|EEZ14632.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093947|gb|EEZ17881.1| glutamate racemase [Brucella melitensis bv. 2 str. 63/9]
gi|264661055|gb|EEZ31316.1| glutamate racemase [Brucella pinnipedialis M292/94/1]
gi|294821119|gb|EFG38118.1| glutamate racemase [Brucella sp. NVSL 07-0026]
gi|297175671|gb|EFH35018.1| glutamate racemase [Brucella abortus bv. 5 str. B3196]
gi|326409213|gb|ADZ66278.1| Asp/Glu racemase [Brucella melitensis M28]
gi|326538922|gb|ADZ87137.1| glutamate racemase [Brucella melitensis M5-90]
Length = 277
Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats.
Identities = 140/260 (53%), Positives = 191/260 (73%), Gaps = 1/260 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF +
Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T
Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I CFIEK+GKR
Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A
Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S KPD A+RRLMQGFGL+
Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276
>gi|256369619|ref|YP_003107129.1| glutamate racemase [Brucella microti CCM 4915]
gi|255999781|gb|ACU48180.1| glutamate racemase [Brucella microti CCM 4915]
Length = 277
Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats.
Identities = 140/260 (53%), Positives = 190/260 (73%), Gaps = 1/260 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF +
Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T
Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT +LI S+ S+CH+ LV + LA E + G E + +I CFIEK+GKR
Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAVIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A
Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S KPD A+RRLMQGFGL+
Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276
>gi|306840341|ref|ZP_07473112.1| glutamate racemase [Brucella sp. BO2]
gi|306844094|ref|ZP_07476688.1| glutamate racemase [Brucella sp. BO1]
gi|306275537|gb|EFM57269.1| glutamate racemase [Brucella sp. BO1]
gi|306289688|gb|EFM60880.1| glutamate racemase [Brucella sp. BO2]
Length = 277
Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats.
Identities = 140/260 (53%), Positives = 191/260 (73%), Gaps = 1/260 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF +
Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T
Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I CFIEK+GKR
Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A
Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S KPD A+RRLMQGFGL+
Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276
>gi|254719253|ref|ZP_05181064.1| glutamate racemase [Brucella sp. 83/13]
gi|265984252|ref|ZP_06096987.1| glutamate racemase [Brucella sp. 83/13]
gi|306838003|ref|ZP_07470861.1| glutamate racemase [Brucella sp. NF 2653]
gi|264662844|gb|EEZ33105.1| glutamate racemase [Brucella sp. 83/13]
gi|306406927|gb|EFM63148.1| glutamate racemase [Brucella sp. NF 2653]
Length = 277
Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 140/260 (53%), Positives = 191/260 (73%), Gaps = 1/260 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF +
Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T
Sbjct: 77 ITNYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT +LI S+ S+CH+ LV + LA+ E + G E + +I CFIEK+GKR
Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAPCFIEKDGKR 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A
Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S KPD A+RRLMQGFGL+
Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276
>gi|321312372|ref|YP_004204659.1| glutamate racemase [Bacillus subtilis BSn5]
gi|320018646|gb|ADV93632.1| glutamate racemase [Bacillus subtilis BSn5]
Length = 271
Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T
Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE K ++ +K +
Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVK----TSLYPLKDT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ DH
Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSANAPDHQ 235
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 236 FLTTGARDQFAKIADDWFG 254
>gi|221310780|ref|ZP_03592627.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315105|ref|ZP_03596910.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221320023|ref|ZP_03601317.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. JH642]
gi|221324306|ref|ZP_03605600.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. SMY]
gi|3241851|dbj|BAA28871.1| glutamate racemase [Bacillus subtilis]
gi|291485269|dbj|BAI86344.1| glutamate racemase [Bacillus subtilis subsp. natto BEST195]
Length = 271
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T
Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE K ++ +K +
Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVK----TSLYPLKDT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH
Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 235
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 236 FLTTGARDQFAKIADDWFG 254
>gi|47776277|dbj|BAD20742.1| glutamate racemase [Bacillus subtilis]
Length = 271
Score = 329 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T
Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE K + + ++ +
Sbjct: 120 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESG----KFLDQTADEIVKTSLYPLKDT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH
Sbjct: 176 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 235
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 236 FLTTGARDQFAKIADDWFG 254
>gi|154686974|ref|YP_001422135.1| glutamate racemase [Bacillus amyloliquefaciens FZB42]
gi|166231025|sp|A7Z7C8|MURI_BACA2 RecName: Full=Glutamate racemase
gi|154352825|gb|ABS74904.1| RacE [Bacillus amyloliquefaciens FZB42]
Length = 272
Score = 329 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + ++++ + +G + P + A T++ I ++ T
Sbjct: 62 LENHHIKMLVIACNTATAIALEDIQRK-TDIPVVGVIQPGARTAIKVTKNQHIGVIGTVN 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + ++ + + +L VE + E+ + E +G
Sbjct: 121 TIKSRAYEQALLGLNAELQVENTACPLLVPFVESGRFLQESAEEAV----EASLEPLKGT 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ + V + + D AR +L +Q++ +H
Sbjct: 177 SIDTLILGCTHYPILKDPIQNYMGEHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQ 236
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G+ + + FG
Sbjct: 237 FLTTGERNGFAKIAEDWFG 255
>gi|255767654|ref|NP_390717.2| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|251757300|sp|P94556|MURI1_BACSU RecName: Full=Glutamate racemase 1
gi|225185282|emb|CAB14799.2| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
Length = 272
Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T
Sbjct: 62 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE K ++ +K +
Sbjct: 121 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVK----TSLYPLKDT 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH
Sbjct: 177 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 236
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 237 FLTTGARDQFAKIADDWFG 255
>gi|83753859|pdb|1ZUW|A Chain A, Crystal Structure Of B.Subtilis Glutamate Racemase (Race)
With D-Glu
gi|83753860|pdb|1ZUW|B Chain B, Crystal Structure Of B.Subtilis Glutamate Racemase (Race)
With D-Glu
gi|83753861|pdb|1ZUW|C Chain C, Crystal Structure Of B.Subtilis Glutamate Racemase (Race)
With D-Glu
gi|1770057|emb|CAA99552.1| glutamate racemase [Bacillus subtilis]
Length = 272
Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D+++ + + +G + P + A T + I ++ T
Sbjct: 62 LENHHIKMLVIACNTATAIALDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTEN 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE K + + ++ +
Sbjct: 121 TIKSNAYEEALLALNPDLKVENLACPLLVPFVESG----KFLDQTADEIVKTSLYPLKDT 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L +Q+ + DH
Sbjct: 177 SIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 236
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 237 FLTTGARDQFAKIADDWFG 255
>gi|328912861|gb|AEB64457.1| Glutamate racemase [Bacillus amyloliquefaciens LL3]
Length = 271
Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + ++++ + +G + P + A T++ I ++ T
Sbjct: 61 LENHHIKMLVIACNTATAIALEDIQRK-TDIPVVGVIQPGARTAIKVTKNQHIGVIGTIN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE + ++ + +E +G
Sbjct: 120 TIKSRAYEQALLGLNADLQVENMACPLLVPFVESG----RFLQESAAEAVEASLEPLKGT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ + V + + D AR +L +Q++ +H
Sbjct: 176 AIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQ 235
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G+ + + FG
Sbjct: 236 FLTTGERNGFAKIAEDWFG 254
>gi|163791540|ref|ZP_02185944.1| glutamate racemase [Carnobacterium sp. AT7]
gi|159873176|gb|EDP67276.1| glutamate racemase [Carnobacterium sp. AT7]
Length = 272
Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V+++ +P YV D PYG + +++ + +L
Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEEQVRQFTWEMTHFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+K + VIACNTA + ++L+ ++ +G + P + A T++ I ++ T T
Sbjct: 63 NK-DIKMLVIACNTATAVALEDLKKKL-AIPIIGVILPGSRAAIKATKNNHIGVIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +I S + + ++ VE G I KK + + K
Sbjct: 121 VKSEKYKKMIQSKDTLASVSSLACPKFVPIVESNEYGSAIA----KKIVAETLKPFKNKN 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDH 248
D ++L CTHYPL+ + + + V +D+ +L N + + +
Sbjct: 177 IDTLILGCTHYPLLRPIIQNVMGDSVTLIDSGAETISEVSTILDYFNLAELSKNKEVSER 236
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
F +G + Q G
Sbjct: 237 KFFTTGSTHMFNDIASQWLG 256
>gi|328554458|gb|AEB24950.1| glutamate racemase [Bacillus amyloliquefaciens TA208]
Length = 271
Score = 327 bits (840), Expect = 9e-88, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 113/259 (43%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + ++++ + +G + P + A T++ I ++ T
Sbjct: 61 LENHHIKMLVIACNTATAIALEDIQRK-TDIPVVGVIQPGARTAIKVTKNQHIGVIGTIN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + + +L VE + ++ + +E +G
Sbjct: 120 TIKSRAYEQALLGLNADLQVENTACPLLVPFVESG----RFLQESAAEAVEASLEPLKGT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ + V + + D AR +L +Q++ +H
Sbjct: 176 AIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQ 235
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G+ + + FG
Sbjct: 236 FLTTGERNGFAKIAEDWFG 254
>gi|148560126|ref|YP_001259114.1| glutamate racemase [Brucella ovis ATCC 25840]
gi|166231028|sp|A5VQW7|MURI_BRUO2 RecName: Full=Glutamate racemase
gi|148371383|gb|ABQ61362.1| glutamate racemase [Brucella ovis ATCC 25840]
Length = 277
Score = 327 bits (840), Expect = 9e-88, Method: Composition-based stats.
Identities = 140/260 (53%), Positives = 189/260 (72%), Gaps = 1/260 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ ALK+R++ LF +
Sbjct: 17 PERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEF 76
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T SGL+S+L+TP T
Sbjct: 77 IANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGT 136
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT +LI S+ S+CH+ LV LA+ E + G E + +I CFIEK GKR
Sbjct: 137 VKRAYTRDLIQSFASRCHVRLVGVDGLAAIAEAHIRGESFDEALVMAQIAPCFIEKGGKR 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R + + DD A
Sbjct: 197 TDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAF 256
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S KPD A+RRLMQGFGL+
Sbjct: 257 FTSRKPDYAIRRLMQGFGLR 276
>gi|227822188|ref|YP_002826159.1| glutamate racemase [Sinorhizobium fredii NGR234]
gi|254766122|sp|C3MD87|MURI_RHISN RecName: Full=Glutamate racemase
gi|227341188|gb|ACP25406.1| glutamate racemase [Sinorhizobium fredii NGR234]
Length = 267
Score = 326 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 146/256 (57%), Positives = 194/256 (75%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF D+L
Sbjct: 7 KPILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGDLLR 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P + +IACNTAFTL+ +LR+ +P M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 67 EHDPEICIIACNTAFTLVGADLRAAYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ SQCH+ LV S LA E Y G K++++ + EI CF+E +G++TD
Sbjct: 127 RAYTRDLIQSFASQCHVRLVGSENLARMAEAYIRGEKLEDEIVLAEIAPCFVEMDGRKTD 186
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F S
Sbjct: 187 IVVLACTHYPFMENVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTS 246
Query: 254 GKPDIAMRRLMQGFGL 269
GKPD A RRLMQGFGL
Sbjct: 247 GKPDFATRRLMQGFGL 262
>gi|196250191|ref|ZP_03148885.1| glutamate racemase [Geobacillus sp. G11MC16]
gi|196210375|gb|EDY05140.1| glutamate racemase [Geobacillus sp. G11MC16]
Length = 264
Score = 326 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIIRQLPKERIIYLGDTARCPYGPRPIEEIRQFTWQMIHY- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + VIACNTA ++ DE+R+ + LG V P + A T++G I ++ T
Sbjct: 60 LQQYPLKMLVIACNTATAVVLDEVRAKL-DIPVLGVVHPGARAALKATKNGHIGVIGTVG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + S + H+ ++ VE + ++ + +
Sbjct: 119 TVRSKAYEKALQSINPRVHVESLACPKFVPLVESG----DFEGEKALAIVAESLAPLRPR 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
DV++L CTHYPL+ + R+ V + + D AR +L + T +H
Sbjct: 175 PIDVLILGCTHYPLLAPLIREYMGKKVKLICSGDETAREVSAILHHSHLLYTGGCEPEHL 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G ++ + + FG
Sbjct: 235 FFTTGSKELFEKISRKWFG 253
>gi|308174536|ref|YP_003921241.1| glutamate racemase [Bacillus amyloliquefaciens DSM 7]
gi|307607400|emb|CBI43771.1| glutamate racemase [Bacillus amyloliquefaciens DSM 7]
Length = 272
Score = 326 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + ++++ + +G + P + A T++ I ++ T
Sbjct: 62 LENHHIKMLVIACNTATAIALEDIQRK-TDIPVVGVIQPGARTAIKVTKNQHIGVIGTIN 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + ++ +L VE + ++ + +E +G
Sbjct: 121 TIKSRAYEQALLGLNADLQVENMACPLLVPFVESG----RFLQESAAEAVEASLEPLKGT 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ + V + + D AR +L +Q++ +H
Sbjct: 177 AIDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQ 236
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G+ + + FG
Sbjct: 237 FLTTGERNGFAKIAEDWFG 255
>gi|150396728|ref|YP_001327195.1| glutamate racemase [Sinorhizobium medicae WSM419]
gi|166231055|sp|A6U9N0|MURI_SINMW RecName: Full=Glutamate racemase
gi|150028243|gb|ABR60360.1| glutamate racemase [Sinorhizobium medicae WSM419]
Length = 271
Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats.
Identities = 148/257 (57%), Positives = 192/257 (74%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF +L
Sbjct: 7 KPILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGRLLA 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P + +IACNTAFTL+ +LR +P M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 67 EHDPEICIIACNTAFTLVGADLRIVYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ SQCH+ LV S LA E Y G + +D ++ EI CF+E +GKRTD
Sbjct: 127 RAYTRDLIQSFASQCHVRLVGSENLARMAEAYIRGEALTDDAVRAEIAPCFVEVDGKRTD 186
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F S
Sbjct: 187 IVVLACTHYPFVANVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTS 246
Query: 254 GKPDIAMRRLMQGFGLK 270
GKPD A RRLMQGFGLK
Sbjct: 247 GKPDFATRRLMQGFGLK 263
>gi|327481904|gb|AEA85214.1| glutamate racemase [Pseudomonas stutzeri DSM 4166]
Length = 264
Score = 324 bits (833), Expect = 6e-87, Method: Composition-based stats.
Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 6/260 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ +FDSG+GGL VL+++R +P +Y+AD PYG +++R +
Sbjct: 1 MSDCNAPVGVFDSGVGGLSVLREIRRRLPHESLLYLADSAHVPYGEKSPEYIRERCRIIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ +++ L V+ACNTA ELR +P + +G PA+K AAA T+SG++ +L+T
Sbjct: 61 AFFVEQGAKAL-VLACNTATAAGVTELRELYPDLPIIGMEPAVKPAAAATRSGVVGVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL+ + L+ + + L R+E + + +EG
Sbjct: 120 TGTLKSARFAALLDRFAGDVRVITQPCPGLVERIEAG----DLASANTRAMLEGWVGPLL 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D ++L CTHYP I + QL P V +D ++AR LL + +
Sbjct: 176 AQGCDTLILGCTHYPFIRPLLAQLLPGDVRLIDTGAAVARHLHELLAERHLLSSGEASQ- 234
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ SG P L +G
Sbjct: 235 RFYCSGDPQRMAEVLPILWG 254
>gi|89098912|ref|ZP_01171792.1| glutamate racemase [Bacillus sp. NRRL B-14911]
gi|89086316|gb|EAR65437.1| glutamate racemase [Bacillus sp. NRRL B-14911]
Length = 266
Score = 324 bits (833), Expect = 6e-87, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I I DSG+GGL V +++ +P + +Y+ D PYG +++ + +
Sbjct: 1 MKQPIGIIDSGVGGLTVAKEVMRQLPNENIVYLGDTARCPYGPRTAEEVRRFTWQMTEFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + + VIACNTA ++ +E++ P + LG + P + A ++S I I+ T
Sbjct: 61 LTQ-DIKMLVIACNTATAVVLEEIQEKLP-IPVLGVIYPGARAALKVSKSNKIGIIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + ++ VE G + KK + K
Sbjct: 119 TVNSKAYEKALKQINRKVCVKPLACPKFVPLVESGEYGSAVA----KKIVAETLKPLRNK 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYPL+ + + + V + + + AR +L +Q+ H
Sbjct: 175 DLDTLILGCTHYPLLEPLIKNIMGPGVKVISSGEETAREVSTILDYRGLLNQSADEPVHK 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I + Q
Sbjct: 235 YFATGSISIFTKIAGQWL 252
>gi|325978965|ref|YP_004288681.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
gi|325178893|emb|CBZ48937.1| Glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
Length = 269
Score = 324 bits (833), Expect = 7e-87, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + + V ACNTA + +E++ + LG + P A T++G
Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I S Q ++ +S A VE ++ KK +
Sbjct: 111 KIGVIGTPMTIKSGIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
+R DD HA + + +
Sbjct: 226 SRTQDDVTHAFYTTASSQSFKEIAVNWL 253
>gi|288905998|ref|YP_003431220.1| glutamate racemase [Streptococcus gallolyticus UCN34]
gi|306832017|ref|ZP_07465172.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|288732724|emb|CBI14298.1| glutamate racemase [Streptococcus gallolyticus UCN34]
gi|304425943|gb|EFM29060.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
Length = 269
Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + + V ACNTA + +E++ + LG + P A T++G
Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I S Q ++ +S A VE ++ KK +
Sbjct: 111 KIGVIGTPMTIKSDIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
+R DD HA + + +
Sbjct: 226 SRTQDDVTHAFYTTASSQSFKEIAVNWL 253
>gi|15965542|ref|NP_385895.1| glutamate racemase [Sinorhizobium meliloti 1021]
gi|307302662|ref|ZP_07582418.1| glutamate racemase [Sinorhizobium meliloti BL225C]
gi|307318509|ref|ZP_07597943.1| glutamate racemase [Sinorhizobium meliloti AK83]
gi|20177981|sp|Q92PG8|MURI_RHIME RecName: Full=Glutamate racemase
gi|15074723|emb|CAC46368.1| Probable glutamate racemase [Sinorhizobium meliloti 1021]
gi|306895849|gb|EFN26601.1| glutamate racemase [Sinorhizobium meliloti AK83]
gi|306903026|gb|EFN33617.1| glutamate racemase [Sinorhizobium meliloti BL225C]
Length = 277
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 147/257 (57%), Positives = 192/257 (74%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF +L
Sbjct: 7 KPILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGRLLA 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P + +IACNTAFTL+ +LR+ +P M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 67 ELDPEICIIACNTAFTLVGADLRAAYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ SQCH+ LV S LA E Y G + ++ + EIE CF+E EGKRTD
Sbjct: 127 RAYTRDLIQSFASQCHVRLVGSENLARMAEAYIRGDALADEAVLAEIEPCFVEAEGKRTD 186
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F S
Sbjct: 187 IVVLACTHYPFMSNVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTS 246
Query: 254 GKPDIAMRRLMQGFGLK 270
G+PD A RRLMQGFGL+
Sbjct: 247 GRPDFATRRLMQGFGLR 263
>gi|153009326|ref|YP_001370541.1| glutamate racemase [Ochrobactrum anthropi ATCC 49188]
gi|166231047|sp|A6X0F8|MURI_OCHA4 RecName: Full=Glutamate racemase
gi|151561214|gb|ABS14712.1| glutamate racemase [Ochrobactrum anthropi ATCC 49188]
Length = 278
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 140/275 (50%), Positives = 191/275 (69%), Gaps = 8/275 (2%)
Query: 3 IDNYPCEK-------KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW 55
+ N P + IL+FDSGIGGL VL++ R LMP+ F+YVADD GFPYG W
Sbjct: 1 MKNAPAVSFSAMPSADAERPILVFDSGIGGLTVLREARVLMPDRRFVYVADDAGFPYGGW 60
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
E+ AL++R++ LF ++ Y P ++VIACNTA TL+ D+LR +PS+ F+G VPAIK AA
Sbjct: 61 EEDALRERIVELFGKLIAAYDPEIAVIACNTASTLVLDDLRQAYPSVPFVGTVPAIKPAA 120
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
T SGL+S+L+TP T+RR YT +LI S+ +QCH+ LV + LA+ E + G +I E
Sbjct: 121 ERTSSGLVSVLATPGTVRRAYTRDLIQSFATQCHVRLVGADQLATVAEAHIRGERIDEAL 180
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL- 234
+ ++I CFIE++G RTD++VLACTHYP + +VFR+L+PWPVDWLD +++IARR LL
Sbjct: 181 VVEQIAPCFIEQDGNRTDIVVLACTHYPFLANVFRRLAPWPVDWLDPAEAIARRTVSLLK 240
Query: 235 PRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGL 269
PR + +D A+ S PD A+RRLMQGFGL
Sbjct: 241 PRRADEELHHHNDLAVVTSRNPDYAIRRLMQGFGL 275
>gi|330967413|gb|EGH67673.1| glutamate racemase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 275
Score = 323 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 5/257 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + +FDSG+GGL VL ++R +P +Y+AD PYG + +R +
Sbjct: 9 PVNPGCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERCL- 67
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ +D + V+ACNTA +R +P +G PA+K AA T+SG++ +L
Sbjct: 68 IIADFFHEQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243
Query: 247 DHALFLSGKPDIAMRRL 263
+ + S PD + L
Sbjct: 244 ETVYWSSDIPDNFGKIL 260
>gi|328543188|ref|YP_004303297.1| glutamate racemase [polymorphum gilvum SL003B-26A1]
gi|326412934|gb|ADZ69997.1| Glutamate racemase [Polymorphum gilvum SL003B-26A1]
Length = 258
Score = 323 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 141/253 (55%), Positives = 186/253 (73%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSGIGGL VL++ R LMPE F+YVADD FPYG W++ L+ RL+ LF+++ D++
Sbjct: 2 LLFDSGIGGLTVLREARVLMPERSFVYVADDAAFPYGGWDEAPLRARLLALFAELFDRFD 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
PV+S++ACNTAFTL +LR+ FP F+G VPAIK AA T+SGL+S+L+TP T+RR Y
Sbjct: 62 PVVSIVACNTAFTLAGADLRAAFPDRTFVGTVPAIKPAAERTRSGLVSVLATPGTVRRAY 121
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI S+ SQCH+ LV S LA E Y G + ++ + EI CF+EK+G RTD++V
Sbjct: 122 TRELIQSFASQCHVRLVGSQNLAPMAEAYIRGEPLSDEAVGAEIADCFLEKDGARTDIVV 181
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
LACTHYP + +VFR+LSPWPVDWLD +++IAR+AR L+P + + R DHA+F SG P
Sbjct: 182 LACTHYPFLANVFRRLSPWPVDWLDPAEAIARQARRLVPALAHLKDRTQTDHAVFTSGSP 241
Query: 257 DIAMRRLMQGFGL 269
D RRLMQGFGL
Sbjct: 242 DFPTRRLMQGFGL 254
>gi|189425888|ref|YP_001953065.1| glutamate racemase [Geobacter lovleyi SZ]
gi|189422147|gb|ACD96545.1| glutamate racemase [Geobacter lovleyi SZ]
Length = 275
Score = 323 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY D PYG + + + S ++
Sbjct: 4 QAIGIFDSGVGGLTVLRELTKALPQEDTIYFGDTARVPYGTKSPDTVIRYSQEIASFLIK 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA + LR + P P K+AA T+SG++ ++ T T+R
Sbjct: 64 R-DIKLLVVACNTASAVALPTLRRSLPVPVVGVIEPGAKRAAEVTRSGVVGVIGTSGTIR 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S I + + EE + + +E E + D
Sbjct: 123 SSAYSRAIKRLNPDISVLAKPCPLFVPLAEEGWIDNDVTRITARLYLE----ELREAQVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFL 252
+VL CTHYPL+ V ++ V +D+++ AR +L + + +H ++
Sbjct: 179 TLVLGCTHYPLLKKVIAEVMGPDVTLVDSAEETARTVATILQEKSMLRPPAELGNHHYYV 238
Query: 253 SGKPDIAMRRLMQGFG 268
+ P +R + G
Sbjct: 239 TDVPAGFIRVGNRFLG 254
>gi|194017293|ref|ZP_03055905.1| glutamate racemase [Bacillus pumilus ATCC 7061]
gi|194011161|gb|EDW20731.1| glutamate racemase [Bacillus pumilus ATCC 7061]
Length = 271
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ IYV D PYG ++ + + + +
Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYVGDTKRCPYGPRKEEEVLQYTWEMAHYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + + VIACNTA + DE++ T + +G + P + A T + I ++ T
Sbjct: 61 LRHHHIKMLVIACNTATAIALDEIKGTL-DIPVIGVIQPGARTAIKVTNNQQIGVIGTAN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + + ++ +L VE + ++ +K +E +
Sbjct: 120 TIKSEAYKEALLSLKAGLAVQSLACPLLVPFVESGTFLDQTADEVVKDSLE----PMKET 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
D ++L CTHYP++ ++ V + + D AR A +L T + H
Sbjct: 176 GIDTLILGCTHYPILKESIQRFMGSDVSIISSGDETAREASTILSYKGLLNTSKEAPVHT 235
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G+ FG
Sbjct: 236 FYTTGQQQNFENIARDWFGY 255
>gi|306834137|ref|ZP_07467257.1| glutamate racemase [Streptococcus bovis ATCC 700338]
gi|304423710|gb|EFM26856.1| glutamate racemase [Streptococcus bovis ATCC 700338]
Length = 269
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + + V ACNTA + + ++ + LG + P A T++G
Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEAVKEKL-DIPVLGVILPGSSAAIKSTRNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I S Q ++ +S A VE ++ KK +
Sbjct: 111 KIGVIGTPMTIKSDIYHQKIKSLAPQMNVTSLSCPKFAPLVESN----EMTSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
+R DD HA + + +
Sbjct: 226 SRTQDDVTHAFYTTASSQSFKEIAVNWL 253
>gi|237799730|ref|ZP_04588191.1| glutamate racemase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022585|gb|EGI02642.1| glutamate racemase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 271
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R +P +YVAD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQSLPNESLLYVADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 EQGAKAL-VVACNTATAAGVAHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E + +I++ ++ +
Sbjct: 130 QSARFAALLDRFASDVRVVTQPCPGLVELIETG----DLISPQIRQLLQHYVKPLLAAQC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + D +
Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPARDTLYWS 245
Query: 253 SGKPDIAMRRL 263
SG PD + L
Sbjct: 246 SGIPDNFRKIL 256
>gi|328946845|gb|EGG40982.1| glutamate racemase [Streptococcus sanguinis SK1087]
Length = 264
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R + +H + + GLK
Sbjct: 226 SREKEELNHQFYTTANAKSFSEIAESWLGLK 256
>gi|323351014|ref|ZP_08086671.1| glutamate racemase [Streptococcus sanguinis VMC66]
gi|322122738|gb|EFX94447.1| glutamate racemase [Streptococcus sanguinis VMC66]
Length = 264
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 62/271 (22%), Positives = 109/271 (40%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 171 PL-----AGQVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R +H + + GLK
Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256
>gi|330873304|gb|EGH07453.1| glutamate racemase [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 275
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 5/257 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + +FDSG+GGL VL ++R +P+ +Y+AD PYG + +R +
Sbjct: 9 PVLQNCDAPVGVFDSGVGGLSVLNEIRQTLPKESLLYLADCGHIPYGEKTPEFIIERCL- 67
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ +D + V+ACNTA +R +P +G PA+K AA T+SG++ +L
Sbjct: 68 IIADFFHEQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243
Query: 247 DHALFLSGKPDIAMRRL 263
D + S PD + L
Sbjct: 244 DTVYWSSDIPDNFGKIL 260
>gi|324993660|gb|EGC25579.1| glutamate racemase [Streptococcus sanguinis SK405]
gi|324995028|gb|EGC26941.1| glutamate racemase [Streptococcus sanguinis SK678]
gi|327462929|gb|EGF09250.1| glutamate racemase [Streptococcus sanguinis SK1]
gi|327474533|gb|EGF19938.1| glutamate racemase [Streptococcus sanguinis SK408]
gi|332359127|gb|EGJ36948.1| glutamate racemase [Streptococcus sanguinis SK49]
gi|332362249|gb|EGJ40049.1| glutamate racemase [Streptococcus sanguinis SK1056]
Length = 264
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R +H + + GLK
Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256
>gi|324991303|gb|EGC23236.1| glutamate racemase [Streptococcus sanguinis SK353]
gi|325687120|gb|EGD29143.1| glutamate racemase [Streptococcus sanguinis SK72]
Length = 264
Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R +H + + GLK
Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256
>gi|213967221|ref|ZP_03395370.1| glutamate racemase [Pseudomonas syringae pv. tomato T1]
gi|301381043|ref|ZP_07229461.1| glutamate racemase [Pseudomonas syringae pv. tomato Max13]
gi|302060375|ref|ZP_07251916.1| glutamate racemase [Pseudomonas syringae pv. tomato K40]
gi|302134865|ref|ZP_07260855.1| glutamate racemase [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213928063|gb|EEB61609.1| glutamate racemase [Pseudomonas syringae pv. tomato T1]
Length = 275
Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 5/257 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + +FDSG+GGL VL ++R +P +Y+AD PYG + +R +
Sbjct: 9 PVLQNCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERCL- 67
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ +D V+ACNTA +R +P +G PA+K AA T+SG++ +L
Sbjct: 68 IIADFFHGQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPASVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243
Query: 247 DHALFLSGKPDIAMRRL 263
D + S PD + L
Sbjct: 244 DTVYWSSDIPDNFGKIL 260
>gi|149183306|ref|ZP_01861747.1| glutamate racemase [Bacillus sp. SG-1]
gi|148848999|gb|EDL63208.1| glutamate racemase [Bacillus sp. SG-1]
Length = 266
Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 8/261 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I I DSG+GGL V +++ +P Y+ D PYG +KK + + +
Sbjct: 1 MDQPIGIIDSGVGGLTVAKEVMRQLPNETIFYLGDTARCPYGPRTAEEVKKFTWEMAAFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ Y + VIACNTA ++ +EL+ P + +G + P + A ++Q+G I +L T
Sbjct: 61 M-NYNIKMLVIACNTATAVVLEELQDMLP-IPVVGVIQPGARAALKHSQNGRIGVLGTVG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ IHS + ++ VE K D + + + +
Sbjct: 119 TVNSKAYDKAIHSINDSIDVTSLACPKFVPLVESGEYESKWAVDIVNET----LVHMREE 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D ++L CTHYPL+ + + + V +++ D AR +L + H
Sbjct: 175 PIDTLILGCTHYPLLQPIVQTVMGQEVKVINSGDETAREVSAILDYQGMLNKKKAKPQHI 234
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G I + + LK
Sbjct: 235 FFTTGSKRIFSKIALDWLQLK 255
>gi|157693253|ref|YP_001487715.1| glutamate racemase [Bacillus pumilus SAFR-032]
gi|167017314|sp|A8FFY8|MURI_BACP2 RecName: Full=Glutamate racemase
gi|157682011|gb|ABV63155.1| glutamate racemase [Bacillus pumilus SAFR-032]
Length = 272
Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L I + DSG+GGL V +++ +P+ IYV D PYG ++ + + + +
Sbjct: 2 LDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYVGDTKRCPYGPRKEEEVLQYTWEMAHYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + + VIACNTA + DE+++T + +G + P + A T + I ++ T
Sbjct: 62 LRHHHIKMLVIACNTATAIALDEIKATL-DIPVIGVIQPGARTAIKVTNNQQIGVIGTAN 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + + ++ +L VE + ++ +K +E +
Sbjct: 121 TIKSEAYKEALLSLKAGLAVQSLACPLLVPFVESGTFLDQTADEVVKDSLE----PMKET 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
D ++L CTHYP++ ++ V + + D AR A +L T + H
Sbjct: 177 GIDTLILGCTHYPILKESIQRFMGSDVSIISSGDETAREASTILSYKGLLNTSQEAPVHT 236
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G+ FG
Sbjct: 237 FYTTGQQQNFENIARDWFGY 256
>gi|325293269|ref|YP_004279133.1| Glutamate racemase [Agrobacterium sp. H13-3]
gi|325061122|gb|ADY64813.1| Glutamate racemase [Agrobacterium sp. H13-3]
Length = 273
Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats.
Identities = 145/257 (56%), Positives = 187/257 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK R++ LF +L+
Sbjct: 13 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEEALKARILSLFEKLLE 72
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 73 DYSPEVCIIACNTAFTLAGADLRARFPDMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 132
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ +QCH+ LV S LA E + G I ++ + EIE CFI+ +GKRTD
Sbjct: 133 RAYTRDLIQSFATQCHVRLVGSENLARMAESWIRGEPISDEAVLAEIEPCFIDSDGKRTD 192
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P + D A+F S
Sbjct: 193 IVVLACTHYPFMANVFRRLAPWPVDWLDPAEAIARRARHLVPLPQDAEHPDGFDFAVFTS 252
Query: 254 GKPDIAMRRLMQGFGLK 270
GKPD A RRLMQGFGL
Sbjct: 253 GKPDFATRRLMQGFGLS 269
>gi|118579835|ref|YP_901085.1| glutamate racemase [Pelobacter propionicus DSM 2379]
gi|118502545|gb|ABK99027.1| glutamate racemase [Pelobacter propionicus DSM 2379]
Length = 272
Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
SI IFDSG+GGL VL+++ MP+ IY D PYG + + + S ++
Sbjct: 4 RSIGIFDSGVGGLTVLREIIKAMPQEDTIYFGDTARVPYGTKSPETVIRYAHEITSFLVR 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNT + + L+ FP P K+A ++SG I ++ T T++
Sbjct: 64 R-DIKLLVVACNTVSAVALNGLKRHFPIPVVGVIEPGAKRAVEVSRSGRIGVIGTAGTIK 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S I +Q + + + EE ++ + + + + D
Sbjct: 123 SSAYSRAIKRLNAQAEVLTRACPLFVPLAEEGWIDNQVA----RLTAQSYLQDLKEAGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFL 252
+VL CTHYPL+ + + V +D+++ AR +L R + +H F+
Sbjct: 179 TLVLGCTHYPLLKPLICETMGPDVTLVDSAEETARSVAEILSRKKLLRPPSEKGNHHYFV 238
Query: 253 SGKPDIAMRRLMQGFG 268
S P +R + G
Sbjct: 239 SDVPAAFIRVGNRFLG 254
>gi|332358334|gb|EGJ36160.1| glutamate racemase [Streptococcus sanguinis SK355]
Length = 264
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE ++ KK +
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESN----ELHSSLTKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
G R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 167 ETLQPLVG-RVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R +H + + GLK
Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256
>gi|325695051|gb|EGD36954.1| glutamate racemase [Streptococcus sanguinis SK150]
gi|325696351|gb|EGD38242.1| glutamate racemase [Streptococcus sanguinis SK160]
Length = 264
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRS 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMKVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R +H + + GLK
Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256
>gi|311069331|ref|YP_003974254.1| glutamate racemase [Bacillus atrophaeus 1942]
gi|310869848|gb|ADP33323.1| glutamate racemase [Bacillus atrophaeus 1942]
Length = 271
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L +
Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIIRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTRELTQYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + + VIACNTA + D ++ + +G + P + A T++ I ++ T
Sbjct: 61 LNSHHIKMLVIACNTATAIALDAIKREV-DIPVVGVIQPGARTAIKVTKNQTIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + ++ + ++ +L VE K + + +E +
Sbjct: 120 TIKSGAYEEALVALNTELKVENLACPLLVPFVESG----KFLDKTADEIVETSLHPLKNT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ ++ V + + D AR +L +Q+ +H
Sbjct: 176 TIDTLILGCTHYPILKDAIQRYMGEHVKIISSGDETAREVSTILSYKGLLNQSPFAAEHQ 235
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G+ + FG
Sbjct: 236 FLTTGERSRFAKIADDWFG 254
>gi|28868327|ref|NP_790946.1| glutamate racemase [Pseudomonas syringae pv. tomato str. DC3000]
gi|38257978|sp|Q888B8|MURI_PSESM RecName: Full=Glutamate racemase
gi|28851564|gb|AAO54641.1| glutamate racemase [Pseudomonas syringae pv. tomato str. DC3000]
gi|331018119|gb|EGH98175.1| glutamate racemase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 275
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 5/257 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + +FDSG+GGL VL ++R +P +Y+AD PYG + +R +
Sbjct: 9 PVNPGCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERCL- 67
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ +D V+ACNTA +R +P +G PA+K AA T+SG++ +L
Sbjct: 68 IIADFFHGQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIETG----DLVSPQIRQLLQRYVEP 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPASVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243
Query: 247 DHALFLSGKPDIAMRRL 263
D + S PD + L
Sbjct: 244 DTLYWSSDIPDNFGKIL 260
>gi|328956948|ref|YP_004374334.1| glutamate racemase [Carnobacterium sp. 17-4]
gi|328673272|gb|AEB29318.1| glutamate racemase [Carnobacterium sp. 17-4]
Length = 272
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V+++ +P YV D PYG + + + + +L
Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEEQILQFTWEMTHFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+K + VIACNTA + ++L+ ++ +G + P + A T++ I I+ T T
Sbjct: 63 NK-DIKMLVIACNTATAVALEDLKKKL-AIPIIGVILPGSRAAIKATKNNRIGIIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +I S + + ++ VE I KK + + K
Sbjct: 121 IKSDKYRKMIRSKDTLASVESLACPKFVPLVESNEYDSAIA----KKIVTETLKPIKNKN 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDH 248
D +VL CTHYPL+ + + V +D+ +L N + + +
Sbjct: 177 IDTLVLGCTHYPLLRPIIQNFMGDSVTLIDSGAETISEVSTILDYFNLAELSKNKEVSER 236
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ +G + Q G
Sbjct: 237 KFYTTGSTHMFNDIASQWLG 256
>gi|327470419|gb|EGF15875.1| glutamate racemase [Streptococcus sanguinis SK330]
Length = 264
Score = 321 bits (825), Expect = 5e-86, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVDSLACPKFVPLVESNELHSSLTKKVVYETLQ 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R +H + + GLK
Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256
>gi|327490090|gb|EGF21878.1| glutamate racemase [Streptococcus sanguinis SK1058]
gi|332367402|gb|EGJ45135.1| glutamate racemase [Streptococcus sanguinis SK1059]
Length = 264
Score = 321 bits (825), Expect = 5e-86, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTVSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R +H + + GLK
Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLGLK 256
>gi|311031420|ref|ZP_07709510.1| glutamate racemase [Bacillus sp. m3-13]
Length = 269
Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 114/258 (44%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q I + DSG+GGL V +++ +P+ IY+ D PYG ++ + +
Sbjct: 1 MQRPIGVIDSGVGGLTVAKEIMRQLPKERIIYLGDTARCPYGPRPVDEVRLYTWEMTRYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + + VIACNTA ++ DE+R + +G V P + A T + + ++ T
Sbjct: 61 LT-HDIKMLVIACNTATAVVLDEIREQL-DIPVIGVVDPGARTALKVTSNYQVGVIGTVG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ +N + S ++ + ++ VE + + + K+ +E +G
Sbjct: 119 TINSGAYANALKSINNEVKVESLACPNFVPLVESG----EFEGERAKEIVEDTLHLFKGS 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
+ D ++L CTHYPL+ + + + + + D AR +L + ++H
Sbjct: 175 KIDTLILGCTHYPLLTPTIQAVMGDGIQLISSGDETAREVSTILNFKKLLNKKQRTENHQ 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ +G ++ + + F
Sbjct: 235 FYTTGSKELFEKIASKLF 252
>gi|146283506|ref|YP_001173659.1| glutamate racemase [Pseudomonas stutzeri A1501]
gi|167017320|sp|A4VPB6|MURI_PSEU5 RecName: Full=Glutamate racemase
gi|145571711|gb|ABP80817.1| glutamate racemase [Pseudomonas stutzeri A1501]
Length = 264
Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats.
Identities = 69/258 (26%), Positives = 122/258 (47%), Gaps = 6/258 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL VL+++R +P +Y+AD PYG +++R + + ++
Sbjct: 6 APVGVFDSGVGGLSVLREIRQRLPHESLLYLADSAHVPYGEKSPEYIRERCRVIAAFFVE 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K L V+ACNTA ELR +P + + PA+K AA T+SG++ +L+T TL+
Sbjct: 66 KGAKAL-VVACNTATAAGVTELRELYPQLPIIAMEPAVKPAALATRSGVVGVLATTGTLK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ + + + L R+E ++ + + + G + D
Sbjct: 125 SAKFAALLDRFAADVRVITQPCPGLVERIEAG----DLESADTRAMLMGWVEPMLAQGCD 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYP I + +QL P + +D ++AR R +L + + + S
Sbjct: 181 TLILGCTHYPFIRPLLQQLLPNDIRLIDTGAAVARHLREMLAERHLLASGDA-TQRFYCS 239
Query: 254 GKPDIAMRRLMQGFGLKS 271
G P R L +G +
Sbjct: 240 GDPQRMARVLPILWGENA 257
>gi|330961731|gb|EGH61991.1| glutamate racemase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 271
Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGVFDSGVGGLSVLNEIRQLLPNESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFH 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 EQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E + +I+ + R
Sbjct: 130 QSARFAALLDRFASDVRVVTQPCPGLVELIESG----DLVSPQIRALLSRYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + R++ P V +D ++AR+ + LL R + + +
Sbjct: 186 DTVILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPARETVYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFGKIL 256
>gi|319651762|ref|ZP_08005888.1| glutamate racemase [Bacillus sp. 2_A_57_CT2]
gi|317396581|gb|EFV77293.1| glutamate racemase [Bacillus sp. 2_A_57_CT2]
Length = 264
Score = 321 bits (823), Expect = 9e-86, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I I DSG+GGL V +++ +P +Y+ D PYG +K + +
Sbjct: 1 MKQPIGIIDSGVGGLTVAKEIMRQLPNEDIVYLGDTARCPYGPRPGDEVKSFTWQMTKYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L++ + +IACNTA + +E+R ++ +G + P + A T++ I ++ T
Sbjct: 61 LER-NIKMLIIACNTATAVALEEIRREL-TIPVIGVIFPGARTAIKVTKNHKIGVIGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R N + + +H ++ VE + KK + +GK
Sbjct: 119 TVRSKAYENALIQLNRRSDVHSLACPKFVPLVESGEYEGSVA----KKIVAETLQPIKGK 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYPL+ + + + V+ + + + AR A +L ++
Sbjct: 175 GMDTLILGCTHYPLLEPIIKNVMGKGVNVISSGEETAREASTILHHYGMLKAVAENPEYK 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G I + G
Sbjct: 235 FCTTGSTAIFSKIASTWLG 253
>gi|327462020|gb|EGF08349.1| glutamate racemase [Streptococcus sanguinis SK1057]
Length = 264
Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVDSLACPKFVPLVESNELHSSLTKKVVYETLQ 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R +H + + + GLK
Sbjct: 226 SREKQEINHQFYTTANANSFSEIAESWLGLK 256
>gi|15889167|ref|NP_354848.1| glutamate racemase [Agrobacterium tumefaciens str. C58]
gi|22001824|sp|Q8UE93|MURI_AGRT5 RecName: Full=Glutamate racemase
gi|15156983|gb|AAK87633.1| glutamate racemase [Agrobacterium tumefaciens str. C58]
Length = 273
Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 144/257 (56%), Positives = 186/257 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK R++ LF +L
Sbjct: 13 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEEALKTRILSLFETLLQ 72
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 73 DYSPEVCIIACNTAFTLAGADLRARFPDMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 132
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ +QCH+ LV S LA E + G + ++ + EIE CFI+ +GKRTD
Sbjct: 133 RAYTRDLIQSFATQCHVRLVGSENLARMAESWIRGEPVSDEAVLAEIEPCFIDSDGKRTD 192
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P + D A+F S
Sbjct: 193 IVVLACTHYPFMANVFRRLAPWPVDWLDPAEAIARRARHLVPLPQDAEHPDGFDFAVFTS 252
Query: 254 GKPDIAMRRLMQGFGLK 270
GKPD A RRLMQGFGL
Sbjct: 253 GKPDFATRRLMQGFGLS 269
>gi|239832083|ref|ZP_04680412.1| glutamate racemase [Ochrobactrum intermedium LMG 3301]
gi|239824350|gb|EEQ95918.1| glutamate racemase [Ochrobactrum intermedium LMG 3301]
Length = 278
Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 139/260 (53%), Positives = 187/260 (71%), Gaps = 1/260 (0%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ IL+FDSGIGGL VL++ R LMP+ F+YVADD GFPYG WE+ AL+ R++ LF
Sbjct: 16 DAERPILVFDSGIGGLTVLREARVLMPDRRFVYVADDAGFPYGGWEEDALRARIVQLFGK 75
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ Y P ++VIACNTA TL+ D+LR+ +P++ F+G VPAIK AA T SGL+S+L+TP
Sbjct: 76 LIADYDPEIAVIACNTASTLVLDDLRNAYPAVPFVGTVPAIKPAAERTSSGLVSVLATPG 135
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+RR YT +LI S+ SQCH+ LV + LA+ E + G KI E + +I CFIE++G
Sbjct: 136 TVRRAYTRDLIQSFASQCHVRLVGADQLAAVAEAHIRGEKIDEALVVAQIAPCFIEQDGN 195
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHA 249
RTD++VLACTHYP + +VFR+L+PWPVDWLD +++IARR LL PR + +D A
Sbjct: 196 RTDIVVLACTHYPFLANVFRRLAPWPVDWLDPAEAIARRTVSLLKPRRAVEELHHHNDLA 255
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ S PD A+RRLMQGFGL
Sbjct: 256 VVTSQNPDYAIRRLMQGFGL 275
>gi|312903654|ref|ZP_07762830.1| glutamate racemase [Enterococcus faecalis TX0635]
gi|310633007|gb|EFQ16290.1| glutamate racemase [Enterococcus faecalis TX0635]
Length = 275
Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 16/273 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG +
Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + +L K + VIACNTA + +E+++ P + +G + P + A T+
Sbjct: 54 IQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I ++ T T++ I S + ++ VE + KK
Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKI 167
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + K D ++L CTHYPL+ V + + V +D+ LL +
Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227
Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
T H + +G + G++
Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260
>gi|229918347|ref|YP_002886993.1| glutamate racemase [Exiguobacterium sp. AT1b]
gi|229469776|gb|ACQ71548.1| glutamate racemase [Exiguobacterium sp. AT1b]
Length = 272
Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 111/260 (42%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+++ +I + DSG+GGL V++++ +P+ +Y+ D PYG ++ L
Sbjct: 5 QMKRAIGVLDSGVGGLTVVKELMRQLPKEEIVYIGDTERCPYGPRPHDEIEAYTWELIEF 64
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+L K + VIACNTA ++ E R + +G + P + A T++ I ++ T
Sbjct: 65 LLKK-DVKMIVIACNTATAVVLKEARKRL-DIPVIGVIDPGARAAVKGTRNKHIGVIGTK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + + ++ ++ VE ++ + +++ +E +
Sbjct: 123 MTIESGSYEKALRHVAGEVDVYSLACPPFVPLVEAG----EVSGERVRQVVEETLRPLQP 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248
D ++L CTHYPL+ V + + V + + D A +L +H
Sbjct: 179 SEMDTLILGCTHYPLLAPVIQDVVGPDVHLISSGDETALEVAAMLDYQELENGLDAVPEH 238
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
A + +G ++ R + G
Sbjct: 239 AFYATGDIELFDRLASEWLG 258
>gi|315144634|gb|EFT88650.1| glutamate racemase [Enterococcus faecalis TX2141]
gi|315160935|gb|EFU04952.1| glutamate racemase [Enterococcus faecalis TX0645]
Length = 275
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 16/273 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG +
Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + +L K + VIACNTA + +E+++ P + +G + P + A T+
Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I ++ T T++ I S + ++ VE + KK
Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKI 167
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + K D ++L CTHYPL+ V + + V +D+ LL +
Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227
Query: 240 HQTRVFDD--HALFLSGKPDIAMRRLMQGFGLK 270
T H + +G + G++
Sbjct: 228 AHTPEAPKQTHEFYTTGSAKMFEEIASSWLGIE 260
>gi|171780258|ref|ZP_02921162.1| hypothetical protein STRINF_02046 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281606|gb|EDT47041.1| hypothetical protein STRINF_02046 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 269
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 18/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + V ACNTA + E++ + LG + P A T++G
Sbjct: 53 YTWELVNFLLTK-NVKMIVFACNTATAVAWKEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I I+ TP T+ I S + + ++ VE G + KK +
Sbjct: 111 KIGIIGTPMTINSEVYPEKIKSLSPKMEVSGLACSKFVPIVESNEMGSSVA----KKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 167 ESLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINH 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFG 268
+R + DH + + + G
Sbjct: 226 SRTENAVDHHFYTTASSQRFKEIAVNWLG 254
>gi|289678403|ref|ZP_06499293.1| glutamate racemase [Pseudomonas syringae pv. syringae FF5]
gi|330900878|gb|EGH32297.1| glutamate racemase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 271
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 EQGAKAL-VVACNTATAAGVSHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +I++ ++ R
Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLQHYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D +
Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVSRDTVYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFRKIL 256
>gi|262283242|ref|ZP_06061009.1| glutamate racemase [Streptococcus sp. 2_1_36FAA]
gi|262261494|gb|EEY80193.1| glutamate racemase [Streptococcus sp. 2_1_36FAA]
Length = 264
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 64/269 (23%), Positives = 108/269 (40%), Gaps = 18/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRD 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKSTHSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE ++ KK +
Sbjct: 111 KIGVIGTPMTVTSDIYRKKIEALSPEMEVSSLACPKFVPLVESN----ELTSSVTKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLLPLAGK-VDTLVLGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFG 268
+R H + + G
Sbjct: 226 SREEQTLQHRFYTTASAKSFAEIAEHWLG 254
>gi|228923236|ref|ZP_04086526.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228836442|gb|EEM81793.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 269
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 236 LFLTTGKIDLFKEIASKWFG 255
>gi|330975580|gb|EGH75646.1| glutamate racemase [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 271
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 EQGAKAL-VVACNTATAAGVSHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +I++ ++ R
Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLLQHYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D +
Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVSRDTVYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFRKIL 256
>gi|325690950|gb|EGD32950.1| glutamate racemase [Streptococcus sanguinis SK115]
Length = 264
Score = 319 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 62/271 (22%), Positives = 109/271 (40%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNMMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R +H + + LK
Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLDLK 256
>gi|229546200|ref|ZP_04434925.1| glutamate racemase [Enterococcus faecalis TX1322]
gi|229550385|ref|ZP_04439110.1| glutamate racemase [Enterococcus faecalis ATCC 29200]
gi|255973156|ref|ZP_05423742.1| glutamate racemase [Enterococcus faecalis T1]
gi|255976199|ref|ZP_05426785.1| glutamate racemase [Enterococcus faecalis T2]
gi|256618705|ref|ZP_05475551.1| glutamate racemase [Enterococcus faecalis ATCC 4200]
gi|256762129|ref|ZP_05502709.1| glutamate racemase [Enterococcus faecalis T3]
gi|256852771|ref|ZP_05558141.1| glutamate racemase [Enterococcus faecalis T8]
gi|256958618|ref|ZP_05562789.1| glutamate racemase [Enterococcus faecalis DS5]
gi|256965478|ref|ZP_05569649.1| glutamate racemase [Enterococcus faecalis HIP11704]
gi|257078028|ref|ZP_05572389.1| glutamate racemase [Enterococcus faecalis JH1]
gi|257082916|ref|ZP_05577277.1| glutamate racemase [Enterococcus faecalis E1Sol]
gi|257085618|ref|ZP_05579979.1| glutamate racemase [Enterococcus faecalis Fly1]
gi|257089533|ref|ZP_05583894.1| glutamate racemase [Enterococcus faecalis CH188]
gi|257422962|ref|ZP_05599952.1| glutamate racemase [Enterococcus faecalis X98]
gi|307268765|ref|ZP_07550133.1| glutamate racemase [Enterococcus faecalis TX4248]
gi|307273812|ref|ZP_07555034.1| glutamate racemase [Enterococcus faecalis TX0855]
gi|307274577|ref|ZP_07555757.1| glutamate racemase [Enterococcus faecalis TX2134]
gi|307278843|ref|ZP_07559906.1| glutamate racemase [Enterococcus faecalis TX0860]
gi|307288574|ref|ZP_07568558.1| glutamate racemase [Enterococcus faecalis TX0109]
gi|307291104|ref|ZP_07570989.1| glutamate racemase [Enterococcus faecalis TX0411]
gi|312899596|ref|ZP_07758922.1| glutamate racemase [Enterococcus faecalis TX0470]
gi|312951373|ref|ZP_07770271.1| glutamate racemase [Enterococcus faecalis TX0102]
gi|229304507|gb|EEN70503.1| glutamate racemase [Enterococcus faecalis ATCC 29200]
gi|229308724|gb|EEN74711.1| glutamate racemase [Enterococcus faecalis TX1322]
gi|255964174|gb|EET96650.1| glutamate racemase [Enterococcus faecalis T1]
gi|255969071|gb|EET99693.1| glutamate racemase [Enterococcus faecalis T2]
gi|256598232|gb|EEU17408.1| glutamate racemase [Enterococcus faecalis ATCC 4200]
gi|256683380|gb|EEU23075.1| glutamate racemase [Enterococcus faecalis T3]
gi|256711230|gb|EEU26268.1| glutamate racemase [Enterococcus faecalis T8]
gi|256949114|gb|EEU65746.1| glutamate racemase [Enterococcus faecalis DS5]
gi|256955974|gb|EEU72606.1| glutamate racemase [Enterococcus faecalis HIP11704]
gi|256986058|gb|EEU73360.1| glutamate racemase [Enterococcus faecalis JH1]
gi|256990946|gb|EEU78248.1| glutamate racemase [Enterococcus faecalis E1Sol]
gi|256993648|gb|EEU80950.1| glutamate racemase [Enterococcus faecalis Fly1]
gi|256998345|gb|EEU84865.1| glutamate racemase [Enterococcus faecalis CH188]
gi|257164786|gb|EEU94746.1| glutamate racemase [Enterococcus faecalis X98]
gi|306497758|gb|EFM67290.1| glutamate racemase [Enterococcus faecalis TX0411]
gi|306500481|gb|EFM69814.1| glutamate racemase [Enterococcus faecalis TX0109]
gi|306504514|gb|EFM73721.1| glutamate racemase [Enterococcus faecalis TX0860]
gi|306508729|gb|EFM77819.1| glutamate racemase [Enterococcus faecalis TX2134]
gi|306509497|gb|EFM78545.1| glutamate racemase [Enterococcus faecalis TX0855]
gi|306514893|gb|EFM83440.1| glutamate racemase [Enterococcus faecalis TX4248]
gi|310630633|gb|EFQ13916.1| glutamate racemase [Enterococcus faecalis TX0102]
gi|311293275|gb|EFQ71831.1| glutamate racemase [Enterococcus faecalis TX0470]
gi|315030713|gb|EFT42645.1| glutamate racemase [Enterococcus faecalis TX4000]
gi|315031599|gb|EFT43531.1| glutamate racemase [Enterococcus faecalis TX0017]
gi|315034959|gb|EFT46891.1| glutamate racemase [Enterococcus faecalis TX0027]
gi|315148458|gb|EFT92474.1| glutamate racemase [Enterococcus faecalis TX4244]
gi|315153644|gb|EFT97660.1| glutamate racemase [Enterococcus faecalis TX0031]
gi|315156538|gb|EFU00555.1| glutamate racemase [Enterococcus faecalis TX0043]
gi|315158364|gb|EFU02381.1| glutamate racemase [Enterococcus faecalis TX0312]
gi|315165532|gb|EFU09549.1| glutamate racemase [Enterococcus faecalis TX1302]
gi|315168389|gb|EFU12406.1| glutamate racemase [Enterococcus faecalis TX1341]
gi|315170972|gb|EFU14989.1| glutamate racemase [Enterococcus faecalis TX1342]
gi|315174640|gb|EFU18657.1| glutamate racemase [Enterococcus faecalis TX1346]
gi|315577482|gb|EFU89673.1| glutamate racemase [Enterococcus faecalis TX0630]
gi|329576388|gb|EGG57901.1| glutamate racemase [Enterococcus faecalis TX1467]
Length = 275
Score = 319 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 16/273 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG +
Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + +L K + VIACNTA + +E+++ P + +G + P + A T+
Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I ++ T T++ I S + ++ VE + KK
Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKI 167
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + K D ++L CTHYPL+ V + + V +D+ LL +
Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227
Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
T H + +G + G++
Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260
>gi|257415735|ref|ZP_05592729.1| glutamate racemase [Enterococcus faecalis AR01/DG]
gi|257157563|gb|EEU87523.1| glutamate racemase [Enterococcus faecalis ARO1/DG]
Length = 275
Score = 319 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 16/273 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG +
Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + +L K + VIACNTA + +E+++ P + +G + P + A T+
Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I ++ T T++ I S + ++ VE + KK
Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKI 167
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + K D ++L CTHYPL+ V + + V +D+ LL +
Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227
Query: 240 HQTRVFDD--HALFLSGKPDIAMRRLMQGFGLK 270
T H + +G + G++
Sbjct: 228 AHTPEVPKQTHEFYTTGSAKMFEEIASSWLGIE 260
>gi|157151279|ref|YP_001450953.1| glutamate racemase [Streptococcus gordonii str. Challis substr.
CH1]
gi|189030375|sp|A8AYU3|MURI_STRGC RecName: Full=Glutamate racemase
gi|157076073|gb|ABV10756.1| glutamate racemase [Streptococcus gordonii str. Challis substr.
CH1]
Length = 264
Score = 319 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 64/269 (23%), Positives = 108/269 (40%), Gaps = 18/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRD 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKSTHSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE ++ KK +
Sbjct: 111 KIGVIGTPMTVTSDIYRKKIEALSPEMEVSSLACPKFVPLVESN----ELTSSVTKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLLPLAGK-VDTLVLGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268
+R H + + G
Sbjct: 226 SREEQTLRHRFYTTASAKSFAEIAEHWLG 254
>gi|256962283|ref|ZP_05566454.1| glutamate racemase [Enterococcus faecalis Merz96]
gi|257086476|ref|ZP_05580837.1| glutamate racemase [Enterococcus faecalis D6]
gi|257418950|ref|ZP_05595944.1| glutamate racemase [Enterococcus faecalis T11]
gi|293383312|ref|ZP_06629227.1| glutamate racemase [Enterococcus faecalis R712]
gi|293387531|ref|ZP_06632080.1| glutamate racemase [Enterococcus faecalis S613]
gi|312905819|ref|ZP_07764839.1| glutamate racemase [Enterococcus faecalis DAPTO 512]
gi|312909126|ref|ZP_07767985.1| glutamate racemase [Enterococcus faecalis DAPTO 516]
gi|256952779|gb|EEU69411.1| glutamate racemase [Enterococcus faecalis Merz96]
gi|256994506|gb|EEU81808.1| glutamate racemase [Enterococcus faecalis D6]
gi|257160778|gb|EEU90738.1| glutamate racemase [Enterococcus faecalis T11]
gi|291079335|gb|EFE16699.1| glutamate racemase [Enterococcus faecalis R712]
gi|291083041|gb|EFE20004.1| glutamate racemase [Enterococcus faecalis S613]
gi|310628158|gb|EFQ11441.1| glutamate racemase [Enterococcus faecalis DAPTO 512]
gi|311290550|gb|EFQ69106.1| glutamate racemase [Enterococcus faecalis DAPTO 516]
gi|315028078|gb|EFT40010.1| glutamate racemase [Enterococcus faecalis TX2137]
gi|315150399|gb|EFT94415.1| glutamate racemase [Enterococcus faecalis TX0012]
gi|327534752|gb|AEA93586.1| glutamate racemase [Enterococcus faecalis OG1RF]
Length = 275
Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 16/273 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG +
Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + +L K + VIACNTA + +E+++ P + +G + P + A T+
Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I ++ T T++ I S + ++ VE + KK
Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLACPKFVPIVESNQYRSSVA----KKI 167
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + K D ++L CTHYPL+ V + + V +D+ LL +
Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227
Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
T H + +G + G++
Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260
>gi|302024339|ref|ZP_07249550.1| glutamate racemase [Streptococcus suis 05HAS68]
gi|330833329|ref|YP_004402154.1| glutamate racemase [Streptococcus suis ST3]
gi|329307552|gb|AEB81968.1| glutamate racemase [Streptococcus suis ST3]
Length = 264
Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 18/270 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V +++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + V ACNTA + +E++ + LG + P A TQ+G
Sbjct: 53 YTWQLVNFLLTK-NVKMIVFACNTATAVAWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T++ I + + + ++ A VE + + + + + +
Sbjct: 111 KVGVLGTAMTIQSDIYRQKIQALSPETQVDSLACPKFAPLVESNSHQSSLAKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + + V +D+ AR LL ++
Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFGL 269
+R D H + + P G+
Sbjct: 226 SRTEKDIQHRFYTTASPAAFKEIAESWMGI 255
>gi|66044205|ref|YP_234046.1| glutamate racemase [Pseudomonas syringae pv. syringae B728a]
gi|63254912|gb|AAY36008.1| Glutamate racemase [Pseudomonas syringae pv. syringae B728a]
gi|330972817|gb|EGH72883.1| glutamate racemase [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 271
Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 EQGAKAL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +I++ ++ R
Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D +
Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLTRSGLLASGVARDTVYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFRKIL 256
>gi|229158101|ref|ZP_04286171.1| Glutamate racemase [Bacillus cereus ATCC 4342]
gi|229198612|ref|ZP_04325314.1| Glutamate racemase [Bacillus cereus m1293]
gi|228584894|gb|EEK43010.1| Glutamate racemase [Bacillus cereus m1293]
gi|228625420|gb|EEK82177.1| Glutamate racemase [Bacillus cereus ATCC 4342]
Length = 274
Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|229163447|ref|ZP_04291398.1| Glutamate racemase [Bacillus cereus R309803]
gi|228620016|gb|EEK76891.1| Glutamate racemase [Bacillus cereus R309803]
Length = 269
Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKR 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V + + V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKNVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 236 LFLTTGKIDLFKEIASKWFG 255
>gi|116252373|ref|YP_768211.1| glutamate racemase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257021|emb|CAK08115.1| putative glutamate racemase [Rhizobium leguminosarum bv. viciae
3841]
Length = 267
Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats.
Identities = 142/258 (55%), Positives = 191/258 (74%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+
Sbjct: 9 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFGRLLE 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 EHDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG++TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDVVSDEAVLSEIDQCFVEKEGRKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P+I D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPQIADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G PD A RRLMQGFGL +
Sbjct: 249 GNPDFATRRLMQGFGLST 266
>gi|295706790|ref|YP_003599865.1| glutamate racemase [Bacillus megaterium DSM 319]
gi|294804449|gb|ADF41515.1| glutamate racemase [Bacillus megaterium DSM 319]
Length = 264
Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 112/258 (43%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + +
Sbjct: 1 MSRPIGVIDSGVGGLTVAKEIMRQLPKEQIMYIGDTARCPYGPRPSEEVRAFTWEMTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ K + VIACNTA ++ DE++ + +G + P + A T++ I ++ T
Sbjct: 61 IAK-DIKMLVIACNTATAVVLDEIQEQL-DIPVIGVIEPGSRAALKVTKNHKIGVIGTNG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ ++ + + ++ + ++ + VE + E ++ ++
Sbjct: 119 TVKSQAYTHALRALHTRVEVENLACPLFVPLVESG----NYEGPEAQRIVKETLKPFYHT 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D ++L CTHYPL+ V ++ V + + + A +L N R +H
Sbjct: 175 DMDTLILGCTHYPLLKPVIQEAIGPRVQLISSGEETAIEVSAILSYSNLLAPRNMEPEHY 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G ++ + F
Sbjct: 235 FFTTGSTELFQSIASKWF 252
>gi|218663166|ref|ZP_03519096.1| glutamate racemase [Rhizobium etli IE4771]
Length = 450
Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats.
Identities = 141/258 (54%), Positives = 190/258 (73%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+
Sbjct: 193 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLN 252
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 253 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 312
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+G++TD
Sbjct: 313 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDDAVLAEIDQCFVEKDGQKTD 372
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P + D A+F S
Sbjct: 373 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAMFTS 432
Query: 254 GKPDIAMRRLMQGFGLKS 271
G+ D A RRLMQGFGLK+
Sbjct: 433 GQQDFATRRLMQGFGLKA 450
>gi|241204880|ref|YP_002975976.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240858770|gb|ACS56437.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 267
Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats.
Identities = 142/257 (55%), Positives = 191/257 (74%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL+++R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+
Sbjct: 9 KPVLVFDSGIGGLTVLREVRVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFGRLLE 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 EHDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG++TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDEAVLTEIDQCFVEKEGRKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P+I D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPQIADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLK 270
G PD A RRLMQGFGL
Sbjct: 249 GNPDFATRRLMQGFGLS 265
>gi|42783635|ref|NP_980882.1| glutamate racemase [Bacillus cereus ATCC 10987]
gi|206975961|ref|ZP_03236871.1| glutamate racemase [Bacillus cereus H3081.97]
gi|217961978|ref|YP_002340548.1| glutamate racemase [Bacillus cereus AH187]
gi|222097946|ref|YP_002532003.1| glutamate racemase [Bacillus cereus Q1]
gi|229141225|ref|ZP_04269764.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
gi|47606713|sp|O31332|MURI_BACC1 RecName: Full=Glutamate racemase
gi|42739564|gb|AAS43490.1| glutamate racemase [Bacillus cereus ATCC 10987]
gi|206745713|gb|EDZ57110.1| glutamate racemase [Bacillus cereus H3081.97]
gi|217068220|gb|ACJ82470.1| glutamate racemase [Bacillus cereus AH187]
gi|221242004|gb|ACM14714.1| glutamate racemase [Bacillus cereus Q1]
gi|228642266|gb|EEK98558.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
gi|324328386|gb|ADY23646.1| glutamate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 269
Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|152976904|ref|YP_001376421.1| glutamate racemase [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152025656|gb|ABS23426.1| glutamate racemase [Bacillus cytotoxicus NVH 391-98]
Length = 267
Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 116/259 (44%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + +
Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ P + +G + P + A T + + ++ T
Sbjct: 61 LA-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTCHVGVIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 119 TVKSGAYEDALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKHT 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 175 EIDTLILGCTHYPILGPVIKRVMGEKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 235 FLTTGKIDLFKEIASKWFG 253
>gi|320547382|ref|ZP_08041671.1| glutamate racemase [Streptococcus equinus ATCC 9812]
gi|320447978|gb|EFW88732.1| glutamate racemase [Streptococcus equinus ATCC 9812]
Length = 269
Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+ ++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVHELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + V ACNTA + E++ + LG + P A T++G
Sbjct: 53 YTWELVNFLLTK-NVKMIVFACNTATAVAWKEVKEKL-DIPVLGVILPGSSAAIKSTRNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I S + + ++ VE ++ KK +
Sbjct: 111 KIGVIGTPMTINSEVYPEKIKSLSPKMEVSGLACPKFVPIVESN----EMTSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 ESLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPDVKLIDSGAECIRDVSVLLNYFEINH 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
++T +H + + + +
Sbjct: 226 NRTEDVTNHHFYTTASSQSFKKIAVNWL 253
>gi|294501442|ref|YP_003565142.1| glutamate racemase [Bacillus megaterium QM B1551]
gi|294351379|gb|ADE71708.1| glutamate racemase [Bacillus megaterium QM B1551]
Length = 264
Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 112/258 (43%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + +
Sbjct: 1 MSRPIGVIDSGVGGLTVAKEIMRQLPKEQIMYIGDTARCPYGPRPSEEVRAFTWEMTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ K + VIACNTA ++ DE++ + +G + P + A T++ I ++ T
Sbjct: 61 VGK-DIKMLVIACNTATAVVLDEIQEQL-DIPVIGVIEPGSRAALKVTKNHKIGVIGTNG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ ++ + + ++ + ++ + VE + E ++ ++
Sbjct: 119 TVKSQAYTHALRALHTRVEVENLACPLFVPLVESG----NYEGPEAQRIVKETLKPFYHT 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D ++L CTHYPL+ V ++ V + + + A +L N R +H
Sbjct: 175 DMDTLILGCTHYPLLKPVIQEAIGPRVQLISSGEETAIEVSAILSYSNLLAPRNMEPEHY 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G ++ + F
Sbjct: 235 FFTTGSTELFQSIASKWF 252
>gi|223934204|ref|ZP_03626140.1| glutamate racemase [Streptococcus suis 89/1591]
gi|223897120|gb|EEF63545.1| glutamate racemase [Streptococcus suis 89/1591]
Length = 264
Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 18/270 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V +++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + V ACNTA + +E++ + LG + P A TQ+G
Sbjct: 53 YTWQLVNFLLTK-NVKMIVFACNTATAVAWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T++ I + + + ++ A VE + + + + + +
Sbjct: 111 KVGVLGTAMTIQSDIYRQKIQALSPKTQVDSLACPKFAPLVESNSHQSSLAKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + + V +D+ AR LL ++
Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFGL 269
+R D H + + P G+
Sbjct: 226 SRTEKDIQHRFYTTASPAAFKEIAESWMGI 255
>gi|118479648|ref|YP_896799.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam]
gi|228917121|ref|ZP_04080679.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228935802|ref|ZP_04098614.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228948207|ref|ZP_04110491.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229093579|ref|ZP_04224680.1| Glutamate racemase [Bacillus cereus Rock3-42]
gi|229124023|ref|ZP_04253215.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|229186725|ref|ZP_04313883.1| Glutamate racemase [Bacillus cereus BGSC 6E1]
gi|118418873|gb|ABK87292.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam]
gi|228596738|gb|EEK54400.1| Glutamate racemase [Bacillus cereus BGSC 6E1]
gi|228659325|gb|EEL14973.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|228689788|gb|EEL43594.1| Glutamate racemase [Bacillus cereus Rock3-42]
gi|228811565|gb|EEM57902.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228823859|gb|EEM69679.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228842539|gb|EEM87629.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 274
Score = 318 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|229175163|ref|ZP_04302679.1| Glutamate racemase [Bacillus cereus MM3]
gi|228608299|gb|EEK65605.1| Glutamate racemase [Bacillus cereus MM3]
Length = 274
Score = 318 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|146319360|ref|YP_001199072.1| glutamate racemase [Streptococcus suis 05ZYH33]
gi|146321565|ref|YP_001201276.1| glutamate racemase [Streptococcus suis 98HAH33]
gi|253752389|ref|YP_003025530.1| glutamate racemase [Streptococcus suis SC84]
gi|253754215|ref|YP_003027356.1| glutamate racemase [Streptococcus suis P1/7]
gi|253756149|ref|YP_003029289.1| glutamate racemase [Streptococcus suis BM407]
gi|166231062|sp|A4W3D7|MURI_STRS2 RecName: Full=Glutamate racemase
gi|166231064|sp|A4VX33|MURI_STRSY RecName: Full=Glutamate racemase
gi|145690166|gb|ABP90672.1| Glutamate racemase [Streptococcus suis 05ZYH33]
gi|145692371|gb|ABP92876.1| Glutamate racemase [Streptococcus suis 98HAH33]
gi|251816678|emb|CAZ52319.1| glutamate racemase [Streptococcus suis SC84]
gi|251818613|emb|CAZ56447.1| glutamate racemase [Streptococcus suis BM407]
gi|251820461|emb|CAR47171.1| glutamate racemase [Streptococcus suis P1/7]
gi|292558992|gb|ADE31993.1| Glutamate racemase [Streptococcus suis GZ1]
Length = 264
Score = 318 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 111/270 (41%), Gaps = 18/270 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V +++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + V ACNTA ++ +E++ + LG + P A TQ+G
Sbjct: 53 YTWQLVNFLLTK-NVKMIVFACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T++ I + + + ++ A VE + + + + + +
Sbjct: 111 KVGVLGTAMTIQSDIYREKIQALSPETQVDSLACPKFAPLVESNSHQSSLAKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + + V +D+ AR LL ++
Sbjct: 171 PLV-----GQVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFGL 269
+R D H + + P G+
Sbjct: 226 SRTEKDIQHRFYTTASPAAFKEIAESWMGI 255
>gi|228987734|ref|ZP_04147845.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228772008|gb|EEM20463.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 269
Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKK 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|229032138|ref|ZP_04188115.1| Glutamate racemase [Bacillus cereus AH1271]
gi|228729194|gb|EEL80193.1| Glutamate racemase [Bacillus cereus AH1271]
Length = 274
Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|170708321|ref|ZP_02898765.1| glutamate racemase [Bacillus anthracis str. A0389]
gi|170126696|gb|EDS95579.1| glutamate racemase [Bacillus anthracis str. A0389]
Length = 269
Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGDFESEMAYEVVRETLQ----PLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|229105119|ref|ZP_04235770.1| Glutamate racemase [Bacillus cereus Rock3-28]
gi|228678300|gb|EEL32526.1| Glutamate racemase [Bacillus cereus Rock3-28]
Length = 273
Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|30264552|ref|NP_846929.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47530017|ref|YP_021366.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187374|ref|YP_030626.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|49478653|ref|YP_038536.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|65321850|ref|ZP_00394809.1| COG0796: Glutamate racemase [Bacillus anthracis str. A2012]
gi|165871456|ref|ZP_02216103.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167635587|ref|ZP_02393899.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|167641657|ref|ZP_02399902.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|170688300|ref|ZP_02879510.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|177653155|ref|ZP_02935442.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190567038|ref|ZP_03019954.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|196034413|ref|ZP_03101822.1| glutamate racemase [Bacillus cereus W]
gi|196039175|ref|ZP_03106481.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|196044858|ref|ZP_03112092.1| glutamate racemase [Bacillus cereus 03BB108]
gi|218905685|ref|YP_002453519.1| glutamate racemase [Bacillus cereus AH820]
gi|225866466|ref|YP_002751844.1| glutamate racemase [Bacillus cereus 03BB102]
gi|227817263|ref|YP_002817272.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|228929530|ref|ZP_04092549.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229602085|ref|YP_002868766.1| glutamate racemase [Bacillus anthracis str. A0248]
gi|254687028|ref|ZP_05150886.1| glutamate racemase [Bacillus anthracis str. CNEVA-9066]
gi|254724590|ref|ZP_05186373.1| glutamate racemase [Bacillus anthracis str. A1055]
gi|254736586|ref|ZP_05194292.1| glutamate racemase [Bacillus anthracis str. Western North America
USA6153]
gi|254741624|ref|ZP_05199311.1| glutamate racemase [Bacillus anthracis str. Kruger B]
gi|254754778|ref|ZP_05206813.1| glutamate racemase [Bacillus anthracis str. Vollum]
gi|254757610|ref|ZP_05209637.1| glutamate racemase [Bacillus anthracis str. Australia 94]
gi|254766106|sp|C1ETT1|MURI_BACC3 RecName: Full=Glutamate racemase
gi|30259210|gb|AAP28415.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47505165|gb|AAT33841.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181301|gb|AAT56677.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|49330209|gb|AAT60855.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|164712753|gb|EDR18283.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167510364|gb|EDR85765.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|167529007|gb|EDR91762.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|170667806|gb|EDT18559.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|172081679|gb|EDT66750.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190562029|gb|EDV15998.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|195992955|gb|EDX56914.1| glutamate racemase [Bacillus cereus W]
gi|196024346|gb|EDX63019.1| glutamate racemase [Bacillus cereus 03BB108]
gi|196029802|gb|EDX68403.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|218535114|gb|ACK87512.1| glutamate racemase [Bacillus cereus AH820]
gi|225786992|gb|ACO27209.1| glutamate racemase [Bacillus cereus 03BB102]
gi|227006462|gb|ACP16205.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|228830109|gb|EEM75727.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229266493|gb|ACQ48130.1| glutamate racemase [Bacillus anthracis str. A0248]
Length = 269
Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|302186441|ref|ZP_07263114.1| glutamate racemase [Pseudomonas syringae pv. syringae 642]
Length = 271
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 EQGAKAL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E + +I++ ++ R
Sbjct: 130 QSARFAALLDRFASDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D +
Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGVLASGVARDTLYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFRKIL 256
>gi|70732473|ref|YP_262235.1| glutamate racemase [Pseudomonas fluorescens Pf-5]
gi|68346772|gb|AAY94378.1| glutamate racemase [Pseudomonas fluorescens Pf-5]
Length = 267
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL +++ L+P +Y D PYG +++R L +
Sbjct: 7 EAPIGVFDSGVGGLSVLAEIQQLLPHESLLYFGDCGHIPYGEKTPEFIRQRCS-LMARFF 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +LR +P +G PA+K AAA T+SG++ +L+T TL
Sbjct: 66 REQGAKALVLACNTATVAGVADLRRDYPDWPIVGMEPAVKPAAAATRSGVVGVLATTGTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ + G
Sbjct: 126 QSAKFAALLDRFATDVKVVTQPCPGLVEMIENG----DLHSAALRQLLHGYLEPLLAAGC 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + Q+ P P+ +D ++AR+ + LL + + +
Sbjct: 182 DTIILGCTHYPFLKPLLAQMLPGPISLIDTGAAVARQLQRLLDEGDLRAQGPARETCFWT 241
Query: 253 SGKPDIAMRRL 263
SG R L
Sbjct: 242 SGDVPHFARVL 252
>gi|228960759|ref|ZP_04122398.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228798975|gb|EEM45950.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 269
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKKLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|229019709|ref|ZP_04176516.1| Glutamate racemase [Bacillus cereus AH1273]
gi|229027350|ref|ZP_04183605.1| Glutamate racemase [Bacillus cereus AH1272]
gi|228733958|gb|EEL84697.1| Glutamate racemase [Bacillus cereus AH1272]
gi|228741616|gb|EEL91809.1| Glutamate racemase [Bacillus cereus AH1273]
Length = 274
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|56421203|ref|YP_148521.1| glutamate racemase [Geobacillus kaustophilus HTA426]
gi|261418316|ref|YP_003251998.1| glutamate racemase [Geobacillus sp. Y412MC61]
gi|297529170|ref|YP_003670445.1| glutamate racemase [Geobacillus sp. C56-T3]
gi|319767724|ref|YP_004133225.1| glutamate racemase [Geobacillus sp. Y412MC52]
gi|81557797|sp|Q5KWI3|MURI_GEOKA RecName: Full=Glutamate racemase
gi|56381045|dbj|BAD76953.1| glutamate racemase [Geobacillus kaustophilus HTA426]
gi|261374773|gb|ACX77516.1| glutamate racemase [Geobacillus sp. Y412MC61]
gi|297252422|gb|ADI25868.1| glutamate racemase [Geobacillus sp. C56-T3]
gi|317112590|gb|ADU95082.1| glutamate racemase [Geobacillus sp. Y412MC52]
Length = 264
Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + D
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKEQIIYLGDTARCPYGPRPVEEVRRFTWQMI-DY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + VIACNTA + D++R+ + LG + P + A T+ G I ++ T
Sbjct: 60 LRQYPLKMLVIACNTATAVALDDVRAKL-DIPVLGVIHPGARAALKATRRGHIGVIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + S + + ++ VE + E +
Sbjct: 119 TIRSRAYEKALQSINPRVQVESLACPKFVPLVESG----DFEGQEAMAIVAESLAPLRPL 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
DV++L CTHYPL+ + R V + + AR +L T +H
Sbjct: 175 PIDVLILGCTHYPLLAPLIRTYMGKRVKLICSGGETAREVSAILHHSQLLYTGEREPEHL 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G ++ + + FG
Sbjct: 235 FFTTGPKELFEKISGKWFG 253
>gi|330951099|gb|EGH51359.1| glutamate racemase [Pseudomonas syringae Cit 7]
Length = 271
Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats.
Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 EQGAKAL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +I++ ++ R
Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + RQ+ P V +D ++AR+ + LL R + + V D +
Sbjct: 186 DTIILGCTHYPFLKPLLRQMLPESVTLIDTGAAVARQLQRLLARSDLLASGVARDTVYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFRKIL 256
>gi|163942231|ref|YP_001647115.1| glutamate racemase [Bacillus weihenstephanensis KBAB4]
gi|163864428|gb|ABY45487.1| glutamate racemase [Bacillus weihenstephanensis KBAB4]
Length = 267
Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 115/259 (44%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + +
Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 61 LD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 119 TVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKST 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 175 DIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 235 FLTTGKIGLFKEIASKWFG 253
>gi|228967586|ref|ZP_04128610.1| Glutamate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|229081749|ref|ZP_04214242.1| Glutamate racemase [Bacillus cereus Rock4-2]
gi|229129779|ref|ZP_04258746.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
gi|229152686|ref|ZP_04280874.1| Glutamate racemase [Bacillus cereus m1550]
gi|228630832|gb|EEK87473.1| Glutamate racemase [Bacillus cereus m1550]
gi|228653695|gb|EEL09566.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
gi|228701594|gb|EEL54087.1| Glutamate racemase [Bacillus cereus Rock4-2]
gi|228792110|gb|EEM39688.1| Glutamate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 274
Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|227518376|ref|ZP_03948425.1| glutamate racemase [Enterococcus faecalis TX0104]
gi|227074054|gb|EEI12017.1| glutamate racemase [Enterococcus faecalis TX0104]
Length = 275
Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 16/273 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG +
Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + +L K + VIACNTA + +E+++ P + +G + P + A T+
Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I ++ T T++ I S + + VE + KK
Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESNQYRSSVA----KKI 167
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + K D ++L CTHYPL+ V + + V +D+ LL +
Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGNHVTLIDSGAETVGEVSMLLDYFDI 227
Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
T H + +G + G++
Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260
>gi|229098955|ref|ZP_04229890.1| Glutamate racemase [Bacillus cereus Rock3-29]
gi|229117984|ref|ZP_04247344.1| Glutamate racemase [Bacillus cereus Rock1-3]
gi|228665433|gb|EEL20915.1| Glutamate racemase [Bacillus cereus Rock1-3]
gi|228684453|gb|EEL38396.1| Glutamate racemase [Bacillus cereus Rock3-29]
Length = 268
Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|315573713|gb|EFU85904.1| glutamate racemase [Enterococcus faecalis TX0309B]
gi|315582672|gb|EFU94863.1| glutamate racemase [Enterococcus faecalis TX0309A]
Length = 275
Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 16/273 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG +
Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + +L K + VIACNTA + +E+++ P + +G + P + A T+
Sbjct: 54 VQFTWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I ++ T T++ I S + + VE + KK
Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESNQYRSSVA----KKI 167
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + K D ++L CTHYPL+ V + + V +D+ LL +
Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227
Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
T H + +G + G++
Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260
>gi|301055994|ref|YP_003794205.1| glutamate racemase [Bacillus anthracis CI]
gi|300378163|gb|ADK07067.1| glutamate racemase [Bacillus cereus biovar anthracis str. CI]
Length = 267
Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + +
Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 61 LD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ + + VE ++ + +++ ++ +
Sbjct: 119 TVKSGAYEEALKSINNRVMVESFACPPFVELVESGNFESEMAYEVVRETLQ----PLKNT 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH
Sbjct: 175 DIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 235 FLTTGKIGLFKEIASKWFG 253
>gi|125718584|ref|YP_001035717.1| glutamate racemase [Streptococcus sanguinis SK36]
gi|166231063|sp|A3CPR2|MURI_STRSV RecName: Full=Glutamate racemase
gi|125498501|gb|ABN45167.1| Glutamate racemase, putative [Streptococcus sanguinis SK36]
Length = 264
Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats.
Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTASG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I + + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVSSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQ 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + V +D+ R LL ++
Sbjct: 171 PL-----AGRVDTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R +H + + LK
Sbjct: 226 SREKQELNHQFYTTANAKSFSEIAESWLRLK 256
>gi|151567719|pdb|2JFO|A Chain A, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D- And L-Glutamate
gi|151567720|pdb|2JFO|B Chain B, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D- And L-Glutamate
gi|151567721|pdb|2JFP|A Chain A, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D-Glutamate
gi|151567722|pdb|2JFP|B Chain B, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D-Glutamate
Length = 293
Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 9/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I + DSG+GGL VL++ +P IY+ D PYG + + + +L
Sbjct: 24 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 83
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K + VIACNTA + +E+++ P + +G + P + A T++ I ++ T T
Sbjct: 84 KKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTKNNKIGVIGTLGT 141
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I S + ++ VE + KK + + K
Sbjct: 142 IKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKIVAETLQALQLKG 197
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHA 249
D ++L CTHYPL+ V + + V +D+ LL + T H
Sbjct: 198 LDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQPHE 257
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
+ +G + G++
Sbjct: 258 FYTTGSAKMFEEIASSWLGIE 278
>gi|149241773|pdb|2GZM|A Chain A, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
gi|149241774|pdb|2GZM|B Chain B, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
gi|149241775|pdb|2GZM|C Chain C, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
gi|149241776|pdb|2GZM|D Chain D, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
Length = 267
Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 61 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 119 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH
Sbjct: 175 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 234
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 235 LFLTTGKIGLFKEIASKWFG 254
>gi|30022575|ref|NP_834206.1| glutamate racemase [Bacillus cereus ATCC 14579]
gi|206969797|ref|ZP_03230751.1| glutamate racemase [Bacillus cereus AH1134]
gi|218233554|ref|YP_002369290.1| glutamate racemase [Bacillus cereus B4264]
gi|218899650|ref|YP_002448061.1| glutamate racemase [Bacillus cereus G9842]
gi|228910317|ref|ZP_04074134.1| Glutamate racemase [Bacillus thuringiensis IBL 200]
gi|229048200|ref|ZP_04193769.1| Glutamate racemase [Bacillus cereus AH676]
gi|229072001|ref|ZP_04205211.1| Glutamate racemase [Bacillus cereus F65185]
gi|229111955|ref|ZP_04241499.1| Glutamate racemase [Bacillus cereus Rock1-15]
gi|229147053|ref|ZP_04275413.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|229180762|ref|ZP_04308100.1| Glutamate racemase [Bacillus cereus 172560W]
gi|229192695|ref|ZP_04319654.1| Glutamate racemase [Bacillus cereus ATCC 10876]
gi|296504971|ref|YP_003666671.1| glutamate racemase [Bacillus thuringiensis BMB171]
gi|226722979|sp|B7IIZ3|MURI_BACC2 RecName: Full=Glutamate racemase
gi|226722980|sp|B7HEB5|MURI_BACC4 RecName: Full=Glutamate racemase
gi|29898133|gb|AAP11407.1| Glutamate racemase [Bacillus cereus ATCC 14579]
gi|206735485|gb|EDZ52653.1| glutamate racemase [Bacillus cereus AH1134]
gi|218161511|gb|ACK61503.1| glutamate racemase [Bacillus cereus B4264]
gi|218541324|gb|ACK93718.1| glutamate racemase [Bacillus cereus G9842]
gi|228590785|gb|EEK48645.1| Glutamate racemase [Bacillus cereus ATCC 10876]
gi|228602740|gb|EEK60223.1| Glutamate racemase [Bacillus cereus 172560W]
gi|228636441|gb|EEK92911.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|228671519|gb|EEL26819.1| Glutamate racemase [Bacillus cereus Rock1-15]
gi|228711160|gb|EEL63125.1| Glutamate racemase [Bacillus cereus F65185]
gi|228723187|gb|EEL74563.1| Glutamate racemase [Bacillus cereus AH676]
gi|228849377|gb|EEM94214.1| Glutamate racemase [Bacillus thuringiensis IBL 200]
gi|296326023|gb|ADH08951.1| glutamate racemase [Bacillus thuringiensis BMB171]
Length = 269
Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|228974598|ref|ZP_04135164.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981193|ref|ZP_04141493.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228778393|gb|EEM26660.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228785001|gb|EEM33014.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
Length = 274
Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 181 TGIDTLILGCTHYPILGPVIKKVMGNKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|2462097|emb|CAA71858.1| glutamate racemase [Bacillus cereus ATCC 14579]
Length = 258
Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 8/263 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFGLKS 271
+GK + + FG +
Sbjct: 236 LFLTTGKIGLFKEIASKWFGRPA 258
>gi|306830119|ref|ZP_07463303.1| glutamate racemase [Streptococcus mitis ATCC 6249]
gi|304427645|gb|EFM30741.1| glutamate racemase [Streptococcus mitis ATCC 6249]
Length = 264
Score = 317 bits (814), Expect = 9e-85, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAKL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
+R H + + + +
Sbjct: 226 SRDAGPLQHRFYTTASSQSFAQIGAEWL 253
>gi|95931009|ref|ZP_01313737.1| Glutamate racemase [Desulfuromonas acetoxidans DSM 684]
gi|95132905|gb|EAT14576.1| Glutamate racemase [Desulfuromonas acetoxidans DSM 684]
Length = 289
Score = 317 bits (814), Expect = 9e-85, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+N+I +FDSG+GGL VL ++R L+P + IY+ D PYG+ + +L
Sbjct: 16 ENAIGVFDSGVGGLTVLHELRRLLPGENLIYLGDTARVPYGSKSPETVCSYSEQAAEFLL 75
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K Q + V+ACNTA + + L+ P +P + A ++ ++ ++ T T+
Sbjct: 76 AK-QVKMIVVACNTASSFALERLQQCLPVPVVGVILPGARCAVRLSRRHVVGVIGTHGTV 134
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + EE + ++ + ++
Sbjct: 135 SSDAYPRALKALQPDMKVVSEPCPLFVPLAEEGWAEHAVAHQVAREYLAPLL----EQQI 190
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYPL+ RQ+ P V +D++ A + LL F+
Sbjct: 191 DTLVLGCTHYPLLKPTLRQVLPDTVQLVDSAQETALEVKELLSEHGLLNPGERGSWTFFV 250
Query: 253 SGKPDIAMRRLMQGF 267
+ P ++ + QGF
Sbjct: 251 TDVPTRFVQ-VGQGF 264
>gi|227552906|ref|ZP_03982955.1| glutamate racemase [Enterococcus faecalis HH22]
gi|227177960|gb|EEI58932.1| glutamate racemase [Enterococcus faecalis HH22]
Length = 275
Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 16/273 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ N Q +I + DSG+GGL VL++ +P IY+ D PYG +
Sbjct: 1 MRMSN-------QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQV 53
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + +L K + VIACNTA + +E+++ P + +G + P + A T+
Sbjct: 54 VQFSWEMADFLLKKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTK 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I ++ T T++ I S + + VE + KK
Sbjct: 112 NNKIGVIGTLGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESNQYRSSVA----KKI 167
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + K D ++L CTHYPL+ V + + V +D+ LL +
Sbjct: 168 VAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDI 227
Query: 240 HQTRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
T H + +G + G++
Sbjct: 228 AHTPEAPTQPHEFYTTGSAKMFEEIASSWLGIE 260
>gi|306824554|ref|ZP_07457900.1| glutamate racemase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|315611776|ref|ZP_07886698.1| glutamate racemase [Streptococcus sanguinis ATCC 49296]
gi|322375928|ref|ZP_08050439.1| glutamate racemase [Streptococcus sp. C300]
gi|331265743|ref|YP_004325373.1| glutamate racemase [Streptococcus oralis Uo5]
gi|304433341|gb|EFM36311.1| glutamate racemase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|315316191|gb|EFU64221.1| glutamate racemase [Streptococcus sanguinis ATCC 49296]
gi|321279196|gb|EFX56238.1| glutamate racemase [Streptococcus sp. C300]
gi|326682415|emb|CBZ00032.1| glutamate racemase [Streptococcus oralis Uo5]
Length = 264
Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
+R H + + + +
Sbjct: 226 SRDAGPLQHRFYTTANSQSFAQIGAEWL 253
>gi|295112705|emb|CBL31342.1| glutamate racemase [Enterococcus sp. 7L76]
Length = 273
Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 9/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I + DSG+GGL VL++ +P IY+ D PYG + + + +L
Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K + VIACNTA + +E+++ P + +G + P + A T++ I ++ T T
Sbjct: 64 KKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTKNNKIGVIGTLGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I S + ++ VE + KK + + K
Sbjct: 122 IKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKIVAETLQALQLKG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HA 249
D ++L CTHYPL+ V + + V +D+ LL + T H
Sbjct: 178 LDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPKQTHE 237
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
+ +G + G++
Sbjct: 238 FYTTGSAKMFEEIASSWLGIE 258
>gi|228941671|ref|ZP_04104218.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228817883|gb|EEM63961.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326942279|gb|AEA18175.1| glutamate racemase [Bacillus thuringiensis serovar chinensis CT-43]
Length = 269
Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 176 TGIDTLILGCTHYPILGPVIKKVMGNKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|319938692|ref|ZP_08013056.1| glutamate racemase [Streptococcus anginosus 1_2_62CV]
gi|319811742|gb|EFW08008.1| glutamate racemase [Streptococcus anginosus 1_2_62CV]
Length = 264
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPADQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K + V+ACNTA ++ +E++ + LG + P A +Q G
Sbjct: 53 YTWQLVQFLLTK-NVKMIVLACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKASQHG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I I+ TP T++ I + + + +S VE ++ KK +
Sbjct: 111 KIGIIGTPMTIQSDIYRQKIERLLPEVEVTSLSCPKFVPLVESN----ELSSSITKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ +GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 167 ESLMPLKGK-VDTLVLGCTHYPLLKPIIQNVMGPTVKLIDSGAECVRDISVLLNYFEINH 225
Query: 242 TRVF--DDHALFLSGKPDIAMRRLMQGF 267
+R H F +
Sbjct: 226 SREGELPQHRFFTTANAKSFAEIAETWL 253
>gi|192988279|pdb|2VVT|A Chain A, Glutamate Racemase (Muri) From E. Faecalis In Complex With
A 9-Benzyl Purine Inhibitor
gi|192988280|pdb|2VVT|B Chain B, Glutamate Racemase (Muri) From E. Faecalis In Complex With
A 9-Benzyl Purine Inhibitor
Length = 290
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 9/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I + DSG+GGL VL++ +P IY+ D PYG + + + +L
Sbjct: 24 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 83
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K + VIACNTA + +E+++ P + +G + P + A T++ I ++ T T
Sbjct: 84 KKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTKNNKIGVIGTLGT 141
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I S + ++ VE + KK + + K
Sbjct: 142 IKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKIVAETLQALQLKG 197
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHA 249
D ++L CTHYPL+ V + + V +D+ LL + T H
Sbjct: 198 LDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQPHE 257
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
+ +G + G++
Sbjct: 258 FYTTGSAKMFEEIASSWLGIE 278
>gi|229169224|ref|ZP_04296938.1| Glutamate racemase [Bacillus cereus AH621]
gi|228614290|gb|EEK71401.1| Glutamate racemase [Bacillus cereus AH621]
Length = 270
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 3 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 63 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 121 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 177 TDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 236
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 237 LFLTTGKIGLFKEIASKWFG 256
>gi|229013698|ref|ZP_04170827.1| Glutamate racemase [Bacillus mycoides DSM 2048]
gi|228747620|gb|EEL97494.1| Glutamate racemase [Bacillus mycoides DSM 2048]
Length = 274
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|289627915|ref|ZP_06460869.1| glutamate racemase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647290|ref|ZP_06478633.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. 2250]
gi|330868901|gb|EGH03610.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 271
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 70/263 (26%), Positives = 123/263 (46%), Gaps = 10/263 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG +
Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFI 58
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + ++ L V+ACNTA +R +P +G PA+K AA T+S
Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T TL+ + L+ + + + L +E + +I++ +
Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLL 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ R D I+L CTHYP + + +++ P V +D ++AR+ + LL R +
Sbjct: 174 QHYVEPLLAARCDTIILGCTHYPFLKPLLQEMLPESVTLIDTGAAVARQLQRLLSRSSLL 233
Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263
T D + S PD + L
Sbjct: 234 ATGDARDTVYWSSDIPDNFRKIL 256
>gi|294780992|ref|ZP_06746344.1| glutamate racemase [Enterococcus faecalis PC1.1]
gi|300859676|ref|ZP_07105764.1| glutamate racemase [Enterococcus faecalis TUSoD Ef11]
gi|294451938|gb|EFG20388.1| glutamate racemase [Enterococcus faecalis PC1.1]
gi|300850494|gb|EFK78243.1| glutamate racemase [Enterococcus faecalis TUSoD Ef11]
gi|323480360|gb|ADX79799.1| glutamate racemase [Enterococcus faecalis 62]
Length = 273
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 9/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I + DSG+GGL VL++ +P IY+ D PYG + + + +L
Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K + VIACNTA + +E+++ P + +G + P + A T++ I ++ T T
Sbjct: 64 KKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTKNNKIGVIGTLGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I S + ++ VE + KK + + K
Sbjct: 122 IKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVA----KKIVAETLQALQLKG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHA 249
D ++L CTHYPL+ V + + V +D+ LL + T H
Sbjct: 178 LDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQPHE 237
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
+ +G + G++
Sbjct: 238 FYTTGSAKMFEEIASSWLGIE 258
>gi|319758794|gb|ADV70736.1| glutamate racemase [Streptococcus suis JS14]
Length = 264
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 18/270 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V +++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K + V ACNTA ++ +E++ + LG + P A TQ+G
Sbjct: 53 YTWQVGNFLLTK-NVKMIVFACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKATQTG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T++ I + + + ++ A VE + + + + + +
Sbjct: 111 KVGVLGTAMTIQSDIYREKIQALSPETQVDSLACPKFAPLVESNSHQSSLAKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + + V +D+ AR LL ++
Sbjct: 171 PLV-----GQVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFGL 269
+R D H + + P G+
Sbjct: 226 SRTEKDIQHRFYTTASPAAFKEIAESWMGI 255
>gi|312864874|ref|ZP_07725105.1| glutamate racemase [Streptococcus downei F0415]
gi|311100001|gb|EFQ58214.1| glutamate racemase [Streptococcus downei F0415]
Length = 264
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 18/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAQQIRD 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++ + LG V P A T SG
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKEKL-DIPVLGVVLPGSSAAIKSTSSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I Q + ++ A VE ++ KK +
Sbjct: 111 KIGVIGTPMTVKSDIYREKIVDLAPQMQVTSLACPRFAPLVESN----QMTSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ESLAPLVGK-VDTLILGCTHYPLLRGIIQNVMGPSVKLIDSGAETIRDVSVLLNYFQLNR 225
Query: 242 TR--VFDDHALFLSGKPDIAMRRLMQGFG 268
+R H + + + G
Sbjct: 226 SREVATSQHRFYTTAGVESFKEIAETWLG 254
>gi|270292152|ref|ZP_06198367.1| glutamate racemase [Streptococcus sp. M143]
gi|270279680|gb|EFA25522.1| glutamate racemase [Streptococcus sp. M143]
Length = 264
Score = 316 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
+R H + + + +
Sbjct: 226 SRDAGPLQHRFYTTANSQSFAQIGEEWL 253
>gi|309798855|ref|ZP_07693116.1| glutamate racemase [Streptococcus infantis SK1302]
gi|308117504|gb|EFO54919.1| glutamate racemase [Streptococcus infantis SK1302]
Length = 264
Score = 316 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKASQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVKSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
+R H + + + +
Sbjct: 226 SRDAAPLQHRFYTTANSQSFAQIGAEWL 253
>gi|296875970|ref|ZP_06900029.1| glutamate racemase [Streptococcus parasanguinis ATCC 15912]
gi|296433045|gb|EFH18833.1| glutamate racemase [Streptococcus parasanguinis ATCC 15912]
Length = 264
Score = 316 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K + V+ACNTA ++ +E++ + LG + P A T
Sbjct: 53 YTWQMVNFLLTK-NVKMIVLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I S + ++ VE ++ KK +
Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMKVTSLACPKFVPLVESN----ELASSVTKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLKPLVGK-VDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225
Query: 242 TR--VFDDHALFLSGKPDIAMRRLMQGF 267
+R + H + + + +
Sbjct: 226 SRELLEQTHRFYTTANANSFAAIAEKWL 253
>gi|75760743|ref|ZP_00740765.1| Glutamate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74491771|gb|EAO54965.1| Glutamate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 274
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYQVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|315223134|ref|ZP_07865002.1| glutamate racemase [Streptococcus anginosus F0211]
gi|315187823|gb|EFU21570.1| glutamate racemase [Streptococcus anginosus F0211]
Length = 264
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K + V+ACNTA ++ +E++ + LG + P A +Q G
Sbjct: 53 YTWQLVQFLLTK-NVKMIVLACNTATAVVWEEIKEKL-DIPVLGVILPGASAAIKASQHG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I I+ TP T++ I + + + +S VE ++ KK +
Sbjct: 111 TIGIIGTPMTIQSDIYRQKIERLLPEVEVTSLSCPKFVPLVESN----ELSSSITKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ +GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 167 ESLMPLKGK-VDTLVLGCTHYPLLKPIIQNVMGPAVKLIDSGAECVRDISVLLNYFEINH 225
Query: 242 TRVF--DDHALFLSGKPDIAMRRLMQGF 267
+R H F +
Sbjct: 226 SREGELPQHRFFTTANAKSFAEIAETWL 253
>gi|257866171|ref|ZP_05645824.1| glutamate racemase [Enterococcus casseliflavus EC30]
gi|257872501|ref|ZP_05652154.1| glutamate racemase [Enterococcus casseliflavus EC10]
gi|257800105|gb|EEV29157.1| glutamate racemase [Enterococcus casseliflavus EC30]
gi|257806665|gb|EEV35487.1| glutamate racemase [Enterococcus casseliflavus EC10]
Length = 274
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 102/259 (39%), Gaps = 10/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P +Y+ D PYG + + + +L
Sbjct: 7 NRPIGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIEYTWQMTRFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+K + VIACNTA + +E++ ++ +G + P + A +++ I ++ T T
Sbjct: 67 EK-NIKMLVIACNTATAVALEEIKEQL-TIPVIGVILPGSRAAVKASKNQRIGVIGTNGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + ++ VE + KK + + KR
Sbjct: 125 IKSDSYKRALHGKAPHASVVSLACPKFVPIVESK----QYHSSVAKKIVAETLRPLKNKR 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDH 248
D ++L CTHYPL+ + + + +D+ LL + T Q H
Sbjct: 181 LDTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPKH 240
Query: 249 ALFLSGKPDIAMRRLMQGF 267
A F +G P +
Sbjct: 241 AFFTTGSPKMFDEIANDWL 259
>gi|52081340|ref|YP_080131.1| glutamate racemase [Bacillus licheniformis ATCC 14580]
gi|52004551|gb|AAU24493.1| glutamate racemase [Bacillus licheniformis ATCC 14580]
Length = 271
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 107/261 (40%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ IY+ D PYG + + + + +
Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYLGDTKRCPYGPRDRKEVLSYTWEMTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L ++ + VIACNTA + +E+ ++ +G V P + A T++ I ++ T
Sbjct: 61 LSRHHIKMLVIACNTATAIALEEISREV-AIPVIGVVQPGARTAIKVTENQRIGVIGTEN 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + ++ + VE K ++ + +
Sbjct: 120 TIKSGAYEEALLSLNGDLTVENLACPMFVPFVESG----KFLDETADEIVRTSLHPLRDS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L T +H
Sbjct: 176 SIDTLILGCTHYPILKEPIQRYMGERVNIISSGDETAREVSTILSYNGLLSKTAEPPEHL 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
+G+ + FG +
Sbjct: 236 FLTTGERARFTKIANDWFGYE 256
>gi|322385930|ref|ZP_08059571.1| glutamate racemase [Streptococcus cristatus ATCC 51100]
gi|321270045|gb|EFX52964.1| glutamate racemase [Streptococcus cristatus ATCC 51100]
Length = 264
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 59/271 (21%), Positives = 109/271 (40%), Gaps = 18/271 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVVYIGDSARAPYGPRPAEQIRD 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A T G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEVKAKL-DIPVLGVILPGASAAIKSTTGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I + + + ++ VE + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRKKIEALSPEMEVQSLACPKFVPLVESNELQSSLTKKVVYETLH 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PL-----AGKVDTLVLGCTHYPLLRPIIQNMMGPSVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGLK 270
+R +H + + LK
Sbjct: 226 SRDKHELNHRFYTTANAKRFAEIAENWLNLK 256
>gi|229062177|ref|ZP_04199501.1| Glutamate racemase [Bacillus cereus AH603]
gi|228717160|gb|EEL68836.1| Glutamate racemase [Bacillus cereus AH603]
Length = 274
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 67 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNDGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|228954765|ref|ZP_04116787.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228804963|gb|EEM51560.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 269
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 115/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRRFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+L + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LL-NLNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|228903012|ref|ZP_04067151.1| Glutamate racemase [Bacillus thuringiensis IBL 4222]
gi|228856605|gb|EEN01126.1| Glutamate racemase [Bacillus thuringiensis IBL 4222]
Length = 269
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYQVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|257875806|ref|ZP_05655459.1| glutamate racemase [Enterococcus casseliflavus EC20]
gi|257809972|gb|EEV38792.1| glutamate racemase [Enterococcus casseliflavus EC20]
Length = 274
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 102/259 (39%), Gaps = 10/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P +Y+ D PYG + + + +L
Sbjct: 7 NRPIGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIEYTWQMTRFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+K + VIACNTA + +E++ ++ +G + P + A +++ I ++ T T
Sbjct: 67 EK-NIKMLVIACNTATAVALEEIKEQL-AIPVIGVILPGSRAAVKASKNQRIGVIGTNGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + ++ VE + KK + + KR
Sbjct: 125 IKSDSYKRALHGKAPHASVVSLACPKFVPIVESK----QYHSSVAKKIVAETLRPLKNKR 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDH 248
D ++L CTHYPL+ + + + +D+ LL + T Q H
Sbjct: 181 LDTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPQH 240
Query: 249 ALFLSGKPDIAMRRLMQGF 267
A F +G P +
Sbjct: 241 AFFTTGSPKMFDEIANDWL 259
>gi|322390073|ref|ZP_08063608.1| glutamate racemase [Streptococcus parasanguinis ATCC 903]
gi|321143200|gb|EFX38643.1| glutamate racemase [Streptococcus parasanguinis ATCC 903]
Length = 264
Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K + V+ACNTA ++ +E++ + LG + P A T
Sbjct: 53 YTWQMVNFLLTK-NVKMIVLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I S + ++ VE ++ KK +
Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMEVSSLACPKFVPLVESN----ELASSVTKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLKPLVGK-VDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225
Query: 242 TR--VFDDHALFLSGKPDIAMRRLMQGF 267
+R + H + + + +
Sbjct: 226 SRELLEQTHRFYTTANANSFAAIAEKWL 253
>gi|52141014|ref|YP_085815.1| glutamate racemase [Bacillus cereus E33L]
gi|81686030|sp|Q633V2|MURI_BACCZ RecName: Full=Glutamate racemase
gi|51974483|gb|AAU16033.1| glutamate racemase [Bacillus cereus E33L]
Length = 269
Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTERCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVVVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|261408424|ref|YP_003244665.1| glutamate racemase [Paenibacillus sp. Y412MC10]
gi|329928213|ref|ZP_08282144.1| glutamate racemase [Paenibacillus sp. HGF5]
gi|261284887|gb|ACX66858.1| glutamate racemase [Paenibacillus sp. Y412MC10]
gi|328937981|gb|EGG34381.1| glutamate racemase [Paenibacillus sp. HGF5]
Length = 268
Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I I DSG+GGL V +++ +P IY D PYG ++ + +
Sbjct: 1 MQQAIAILDSGVGGLTVAKEVMRQLPREKIIYFGDTARAPYGPRTPEEVRLFTEQIVDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ +Y P + VIACNTA D + S P + +G + P + A + T++G + ++ T
Sbjct: 61 I-QYDPKMIVIACNTATAAALDYISSKVP-VPVIGVIHPGARAAISATKTGHVGVIGTVG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + + L VE K +++ + G +
Sbjct: 119 TIGSGAYTAALKQLSPYIGVESQACPELVPLVEHGLFRSKDSLQVVERSLRGI----KDT 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHA 249
D ++L CTHYP +++ + + V + ++D AR +L + + H
Sbjct: 175 SIDCLILGCTHYPFLMNTIQTVMGPNVKLISSADETAREVSTILYDKGQLASSMEGPVHQ 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G P+I + G
Sbjct: 235 FFCTGDPEIFQSIATEWLG 253
>gi|312868338|ref|ZP_07728538.1| glutamate racemase [Streptococcus parasanguinis F0405]
gi|311096083|gb|EFQ54327.1| glutamate racemase [Streptococcus parasanguinis F0405]
Length = 264
Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K + V+ACNTA ++ +E++ + LG + P A T
Sbjct: 53 YTWQMVNFLLTK-NVKMIVLACNTATAVVWEEVKEKL-DIPVLGVILPGASAAIKSTTHQ 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I S + ++ VE ++ KK +
Sbjct: 111 KIGVIGTPMTVSSGIYKEKIQSLAPDMEVSSLACPKFVPLVESN----ELASSVTKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ETLKPLVGK-VDTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNK 225
Query: 242 TR--VFDDHALFLSGKPDIAMRRLMQGF 267
+R + H + + + +
Sbjct: 226 SRELLEQTHRFYTTANANSFAAIAEKWL 253
>gi|322387113|ref|ZP_08060724.1| glutamate racemase [Streptococcus infantis ATCC 700779]
gi|321142100|gb|EFX37594.1| glutamate racemase [Streptococcus infantis ATCC 700779]
Length = 264
Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats.
Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++S + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKSKL-DIPVLGVILPGASAAIKTSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 RIGVIGTPMTVQSDIYRQKIHDLDPNLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPEVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDAGPLQHRFYTTANSHSFAQIGAEWL 253
>gi|293364220|ref|ZP_06610946.1| glutamate racemase [Streptococcus oralis ATCC 35037]
gi|307702427|ref|ZP_07639383.1| glutamate racemase [Streptococcus oralis ATCC 35037]
gi|291317066|gb|EFE57493.1| glutamate racemase [Streptococcus oralis ATCC 35037]
gi|307624009|gb|EFO02990.1| glutamate racemase [Streptococcus oralis ATCC 35037]
Length = 264
Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAKL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
+R H + + + +
Sbjct: 226 SRDAGPLQHRFYTTASSQSFAQIGEEWL 253
>gi|331086725|ref|ZP_08335802.1| glutamate racemase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330409891|gb|EGG89326.1| glutamate racemase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 278
Score = 315 bits (809), Expect = 3e-84, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 18/268 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKI+N K I +FDSG+GGL V +++ +P +Y D PYG+ + +
Sbjct: 1 MKIEN-----KKDMPIGVFDSGVGGLTVAREIMRQLPNESIVYFGDTARVPYGSKSETTI 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + +L K + VIACNTA L D +R F + +G V P + A T
Sbjct: 56 IRYSRQIIRFLLTK-EVKAIVIACNTASALALDAVRKEFK-IPIIGVVAPGARAAREETI 113
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I ++ T AT++ LI + Q + + + VEE KI ++
Sbjct: 114 NKKIGVIGTEATVKSEIYKKLIQAEDPQISVSGRACPLFVPLVEEGFAKHKIT----REV 169
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
I+ + D ++L CTHYPL+ R+ + ++ + A + LL
Sbjct: 170 IDIYLSDMRESDIDTLILGCTHYPLLRSTIREYMGEKIHLVNPAYETAMDLKRLLEEEEM 229
Query: 240 HQTRVFDDHA------LFLSGKPDIAMR 261
+ +D ++S D +
Sbjct: 230 LRDTPVNDQEEHGEYSFYVSDAADKFKQ 257
>gi|320325693|gb|EFW81754.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. B076]
gi|320327388|gb|EFW83402.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. race 4]
gi|330881879|gb|EGH16028.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. race 4]
Length = 271
Score = 315 bits (809), Expect = 3e-84, Method: Composition-based stats.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG +
Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFI 58
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + ++ L V+ACNTA +R +P +G PA+K AA T+S
Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T TL+ + L+ + + + L +E + +I++ +
Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLL 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 174 LHYVEPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLL 233
Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263
T + + S PD + L
Sbjct: 234 ATGTARETMYWSSDIPDNFRKIL 256
>gi|325570406|ref|ZP_08146183.1| glutamate racemase [Enterococcus casseliflavus ATCC 12755]
gi|325156616|gb|EGC68793.1| glutamate racemase [Enterococcus casseliflavus ATCC 12755]
Length = 277
Score = 315 bits (809), Expect = 3e-84, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 101/259 (38%), Gaps = 10/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P +Y+ D PYG + + +L
Sbjct: 10 NRPIGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIAYTWQMTRFLL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+K + VIACNTA + +E++ ++ +G + P + A +++ I ++ T T
Sbjct: 70 EK-NIKMLVIACNTATAVALEEIKEKL-AIPVIGVILPGSRAAVKASKNQRIGVIGTNGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + ++ VE + KK + + KR
Sbjct: 128 IKSDSYKRALHGKAPHASVVSLACPKFVPIVESK----QYHSSVAKKIVAETLRPLKNKR 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDH 248
D ++L CTHYPL+ + + + +D+ LL + T Q H
Sbjct: 184 LDTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHPQH 243
Query: 249 ALFLSGKPDIAMRRLMQGF 267
A F +G P I
Sbjct: 244 AFFTTGSPKIFDEIANDWL 262
>gi|298485684|ref|ZP_07003763.1| Glutamate racemase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298159710|gb|EFI00752.1| Glutamate racemase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|330988602|gb|EGH86705.1| glutamate racemase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 271
Score = 315 bits (809), Expect = 4e-84, Method: Composition-based stats.
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG +
Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFI 58
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + ++ L V+ACNTA +R +P +G PA+K AA T+S
Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T TL+ + L+ + + + L +E + +I++ +
Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLL 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 174 LHYVEPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLL 233
Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263
T D + S PD + L
Sbjct: 234 ATGDARDTVYWSSDIPDNFRKIL 256
>gi|322391355|ref|ZP_08064825.1| glutamate racemase [Streptococcus peroris ATCC 700780]
gi|321145781|gb|EFX41172.1| glutamate racemase [Streptococcus peroris ATCC 700780]
Length = 264
Score = 315 bits (809), Expect = 4e-84, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E++S + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKSKL-DIPVLGVILPGASAAIKASQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + +S A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPNLQVESLSCPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDVGPLQHRFYTTANSQSFAQIGAEWL 253
>gi|194397943|ref|YP_002038470.1| glutamate racemase [Streptococcus pneumoniae G54]
gi|226707591|sp|B5E1Z3|MURI_STRP4 RecName: Full=Glutamate racemase
gi|194357610|gb|ACF56058.1| glutamate racemase [Streptococcus pneumoniae G54]
Length = 264
Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRKKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253
>gi|260460843|ref|ZP_05809093.1| glutamate racemase [Mesorhizobium opportunistum WSM2075]
gi|259033420|gb|EEW34681.1| glutamate racemase [Mesorhizobium opportunistum WSM2075]
Length = 275
Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats.
Identities = 131/259 (50%), Positives = 183/259 (70%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF+ +L
Sbjct: 3 DQPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILELFARLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D++ PV+SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T+
Sbjct: 63 DRFSPVISVIACNTASTLVIDALRDRFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E +G+RT
Sbjct: 123 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEAYMREGFVDEEAVRAEITPCFMEHDGRRT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F
Sbjct: 183 DIVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFT 242
Query: 253 SGKPDIAMRRLMQGFGLKS 271
SGK D A+ RLMQGFGL +
Sbjct: 243 SGKADFAVSRLMQGFGLVA 261
>gi|23099563|ref|NP_693029.1| glutamate racemase [Oceanobacillus iheyensis HTE831]
gi|29839537|sp|Q8EPJ4|MURI_OCEIH RecName: Full=Glutamate racemase
gi|22777793|dbj|BAC14064.1| glutamate racemase [Oceanobacillus iheyensis HTE831]
Length = 274
Score = 314 bits (807), Expect = 5e-84, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ SI + DSG+GGL V+ ++ +P+ IY+ D PYG +++ + +
Sbjct: 1 MDKSIGVIDSGVGGLTVVHELMRQLPKEQLIYLGDTARCPYGPRSKEEVRQFTWEMVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L K + V+ACNTA +L+ + +G + P + A T + + ++ T
Sbjct: 61 LTK-NIKMLVVACNTATAFTLKDLKEQL-DIPVIGVIQPGARAAIKSTTNNQVGVIGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ S + S + ++ VE + + + + K
Sbjct: 119 TISSGAYSQALEKIKSDIQVSGLACPPFVPMVERGVLSGPEAKAVVSEALRPF---SNNK 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA 249
D ++L CTHYPL+ +++ V + +S+ AR LL + + H
Sbjct: 176 EMDTLILGCTHYPLLKSTIQEVMGEEVTVISSSEETARETSTLLDVHQIMNRSDLVPLHQ 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ +G +I + F
Sbjct: 236 FYTTGDLEIFIEIAKTIF 253
>gi|29375697|ref|NP_814851.1| glutamate racemase [Enterococcus faecalis V583]
gi|81585411|sp|Q836J0|MURI_ENTFA RecName: Full=Glutamate racemase
gi|29343158|gb|AAO80921.1| glutamate racemase [Enterococcus faecalis V583]
Length = 273
Score = 314 bits (807), Expect = 5e-84, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 9/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I + DSG+GGL VL++ +P IY+ D PYG + + + +L
Sbjct: 4 QEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K + VIACNTA + +E+++ P + +G + P + A T++ I ++ T T
Sbjct: 64 KKR-IKMLVIACNTATAVALEEIKAALP-IPVVGVILPGARAAVKVTKNNKIGVIGTLGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I S + + VE + KK + + K
Sbjct: 122 IKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESNQYRSSVA----KKIVAETLQALQLKG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHA 249
D ++L CTHYPL+ V + + V +D+ LL + T H
Sbjct: 178 LDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQPHE 237
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
+ +G + G++
Sbjct: 238 FYTTGSAKMFEEIASSWLGIE 258
>gi|15901709|ref|NP_346313.1| glutamate racemase [Streptococcus pneumoniae TIGR4]
gi|15903738|ref|NP_359288.1| glutamate racemase [Streptococcus pneumoniae R6]
gi|111657289|ref|ZP_01408054.1| hypothetical protein SpneT_02001506 [Streptococcus pneumoniae
TIGR4]
gi|116516596|ref|YP_817111.1| glutamate racemase [Streptococcus pneumoniae D39]
gi|148993339|ref|ZP_01822879.1| glutamate racemase [Streptococcus pneumoniae SP9-BS68]
gi|148998745|ref|ZP_01826183.1| glutamate racemase [Streptococcus pneumoniae SP11-BS70]
gi|149006464|ref|ZP_01830163.1| glutamate racemase [Streptococcus pneumoniae SP18-BS74]
gi|149011254|ref|ZP_01832501.1| glutamate racemase [Streptococcus pneumoniae SP19-BS75]
gi|149025005|ref|ZP_01836385.1| glutamate racemase [Streptococcus pneumoniae SP23-BS72]
gi|168483413|ref|ZP_02708365.1| glutamate racemase [Streptococcus pneumoniae CDC1873-00]
gi|168487311|ref|ZP_02711819.1| glutamate racemase [Streptococcus pneumoniae CDC1087-00]
gi|168489841|ref|ZP_02714040.1| glutamate racemase [Streptococcus pneumoniae SP195]
gi|168491804|ref|ZP_02715947.1| glutamate racemase [Streptococcus pneumoniae CDC0288-04]
gi|168494203|ref|ZP_02718346.1| glutamate racemase [Streptococcus pneumoniae CDC3059-06]
gi|168574930|ref|ZP_02720893.1| glutamate racemase [Streptococcus pneumoniae MLV-016]
gi|169833125|ref|YP_001695247.1| glutamate racemase [Streptococcus pneumoniae Hungary19A-6]
gi|182684824|ref|YP_001836571.1| glutamate racemase [Streptococcus pneumoniae CGSP14]
gi|221232616|ref|YP_002511770.1| glutamate racemase [Streptococcus pneumoniae ATCC 700669]
gi|225855314|ref|YP_002736826.1| glutamate racemase [Streptococcus pneumoniae JJA]
gi|225857468|ref|YP_002738979.1| glutamate racemase [Streptococcus pneumoniae P1031]
gi|225859643|ref|YP_002741153.1| glutamate racemase [Streptococcus pneumoniae 70585]
gi|225861674|ref|YP_002743183.1| glutamate racemase [Streptococcus pneumoniae Taiwan19F-14]
gi|298230339|ref|ZP_06964020.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298503608|ref|YP_003725548.1| glutamate racemase [Streptococcus pneumoniae TCH8431/19A]
gi|303254610|ref|ZP_07340712.1| glutamate racemase [Streptococcus pneumoniae BS455]
gi|303258827|ref|ZP_07344807.1| glutamate racemase [Streptococcus pneumoniae SP-BS293]
gi|303261990|ref|ZP_07347936.1| glutamate racemase [Streptococcus pneumoniae SP14-BS292]
gi|303263853|ref|ZP_07349775.1| glutamate racemase [Streptococcus pneumoniae BS397]
gi|303265612|ref|ZP_07351511.1| glutamate racemase [Streptococcus pneumoniae BS457]
gi|303269880|ref|ZP_07355623.1| glutamate racemase [Streptococcus pneumoniae BS458]
gi|307068494|ref|YP_003877460.1| glutamate racemase [Streptococcus pneumoniae AP200]
gi|307128076|ref|YP_003880107.1| glutamate racemase [Streptococcus pneumoniae 670-6B]
gi|307710764|ref|ZP_07647192.1| glutamate racemase [Streptococcus mitis SK321]
gi|54037869|sp|P63641|MURI_STRR6 RecName: Full=Glutamate racemase
gi|54041262|sp|P63640|MURI_STRPN RecName: Full=Glutamate racemase
gi|122278043|sp|Q04IS7|MURI_STRP2 RecName: Full=Glutamate racemase
gi|229486278|sp|B1I891|MURI_STRPI RecName: Full=Glutamate racemase
gi|229486279|sp|B2ISX9|MURI_STRPS RecName: Full=Glutamate racemase
gi|254766126|sp|C1C9E7|MURI_STRP7 RecName: Full=Glutamate racemase
gi|254766127|sp|B8ZNI5|MURI_STRPJ RecName: Full=Glutamate racemase
gi|254766129|sp|C1CGA5|MURI_STRZJ RecName: Full=Glutamate racemase
gi|254766130|sp|C1CMJ1|MURI_STRZP RecName: Full=Glutamate racemase
gi|254766131|sp|C1CTB1|MURI_STRZT RecName: Full=Glutamate racemase
gi|14973385|gb|AAK75953.1| glutamate racemase [Streptococcus pneumoniae TIGR4]
gi|15459371|gb|AAL00499.1| Glutamate racemase [Streptococcus pneumoniae R6]
gi|116077172|gb|ABJ54892.1| glutamate racemase [Streptococcus pneumoniae D39]
gi|147755439|gb|EDK62488.1| glutamate racemase [Streptococcus pneumoniae SP11-BS70]
gi|147761762|gb|EDK68725.1| glutamate racemase [Streptococcus pneumoniae SP18-BS74]
gi|147764244|gb|EDK71175.1| glutamate racemase [Streptococcus pneumoniae SP19-BS75]
gi|147928106|gb|EDK79125.1| glutamate racemase [Streptococcus pneumoniae SP9-BS68]
gi|147929498|gb|EDK80493.1| glutamate racemase [Streptococcus pneumoniae SP23-BS72]
gi|168995627|gb|ACA36239.1| glutamate racemase [Streptococcus pneumoniae Hungary19A-6]
gi|172043246|gb|EDT51292.1| glutamate racemase [Streptococcus pneumoniae CDC1873-00]
gi|182630158|gb|ACB91106.1| glutamate racemase [Streptococcus pneumoniae CGSP14]
gi|183569790|gb|EDT90318.1| glutamate racemase [Streptococcus pneumoniae CDC1087-00]
gi|183571721|gb|EDT92249.1| glutamate racemase [Streptococcus pneumoniae SP195]
gi|183573878|gb|EDT94406.1| glutamate racemase [Streptococcus pneumoniae CDC0288-04]
gi|183575767|gb|EDT96295.1| glutamate racemase [Streptococcus pneumoniae CDC3059-06]
gi|183578940|gb|EDT99468.1| glutamate racemase [Streptococcus pneumoniae MLV-016]
gi|220675078|emb|CAR69656.1| glutamate racemase [Streptococcus pneumoniae ATCC 700669]
gi|225720017|gb|ACO15871.1| glutamate racemase [Streptococcus pneumoniae 70585]
gi|225723477|gb|ACO19330.1| glutamate racemase [Streptococcus pneumoniae JJA]
gi|225725094|gb|ACO20946.1| glutamate racemase [Streptococcus pneumoniae P1031]
gi|225728008|gb|ACO23859.1| glutamate racemase [Streptococcus pneumoniae Taiwan19F-14]
gi|298239203|gb|ADI70334.1| glutamate racemase [Streptococcus pneumoniae TCH8431/19A]
gi|301802572|emb|CBW35333.1| glutamate racemase [Streptococcus pneumoniae INV200]
gi|302598322|gb|EFL65366.1| glutamate racemase [Streptococcus pneumoniae BS455]
gi|302637073|gb|EFL67562.1| glutamate racemase [Streptococcus pneumoniae SP14-BS292]
gi|302640328|gb|EFL70783.1| glutamate racemase [Streptococcus pneumoniae SP-BS293]
gi|302640583|gb|EFL70987.1| glutamate racemase [Streptococcus pneumoniae BS458]
gi|302644739|gb|EFL74987.1| glutamate racemase [Streptococcus pneumoniae BS457]
gi|302646891|gb|EFL77116.1| glutamate racemase [Streptococcus pneumoniae BS397]
gi|306410031|gb|ADM85458.1| Glutamate racemase [Streptococcus pneumoniae AP200]
gi|306485138|gb|ADM92007.1| glutamate racemase [Streptococcus pneumoniae 670-6B]
gi|307617370|gb|EFN96542.1| glutamate racemase [Streptococcus mitis SK321]
gi|327390042|gb|EGE88387.1| glutamate racemase [Streptococcus pneumoniae GA04375]
gi|332072219|gb|EGI82704.1| glutamate racemase [Streptococcus pneumoniae GA17545]
gi|332072704|gb|EGI83187.1| glutamate racemase [Streptococcus pneumoniae GA17570]
gi|332073032|gb|EGI83512.1| glutamate racemase [Streptococcus pneumoniae GA41301]
gi|332199901|gb|EGJ13976.1| glutamate racemase [Streptococcus pneumoniae GA41317]
gi|332200436|gb|EGJ14509.1| glutamate racemase [Streptococcus pneumoniae GA47368]
Length = 264
Score = 314 bits (807), Expect = 5e-84, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253
>gi|288553638|ref|YP_003425573.1| glutamate racemase [Bacillus pseudofirmus OF4]
gi|288544798|gb|ADC48681.1| glutamate racemase [Bacillus pseudofirmus OF4]
Length = 269
Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 107/258 (41%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + +
Sbjct: 1 MDRPIGVIDSGLGGLTVAKELMRQLPKEEIVYLGDSARCPYGPRTSEEVRTYTWEMINRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L++ + VIACNTA ++ +E++ S+ +G V P A T+ ++++ T
Sbjct: 61 LEE-NMKMLVIACNTATAVVLEEVKKEL-SIPVVGVVHPGATSALKVTKKDHVAVIGTVG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + S + + ++ VE + +K+ +E + +
Sbjct: 119 TIESGAYEKALKSINHEVKVESLACPPFVPLVERGVFEGAEADLIVKEVLE----PLQNR 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
D ++L CTHYPL+ ++ V + + D AR LL N + H
Sbjct: 175 GFDTMILGCTHYPLLKDTIQKQMGPDVQLISSGDETAREVSGLLYHNNLLFTDQRKPTHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G D +
Sbjct: 235 FFTTGDKDQFKTLADKWL 252
>gi|237651133|ref|ZP_04525385.1| glutamate racemase [Streptococcus pneumoniae CCRI 1974]
gi|237820927|ref|ZP_04596772.1| glutamate racemase [Streptococcus pneumoniae CCRI 1974M2]
Length = 264
Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +++++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEKIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRKKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253
>gi|222148423|ref|YP_002549380.1| glutamate racemase [Agrobacterium vitis S4]
gi|221735411|gb|ACM36374.1| glutamate racemase [Agrobacterium vitis S4]
Length = 269
Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats.
Identities = 139/257 (54%), Positives = 185/257 (71%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE FIY+ADD GFPYGNWE+ LK R++ LF+ +L
Sbjct: 9 KPILVFDSGIGGLTVLREARVLMPERGFIYIADDAGFPYGNWEEEPLKARIVSLFASLLA 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+Y P ++AC+TAFTL LR FP M F+G VPAIK AA ++SGLIS+L+TP T++
Sbjct: 69 QYDPEAVIVACSTAFTLAGAALREAFPGMRFIGTVPAIKPAAERSRSGLISVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ SQC ++LV S LA E Y G ++E +K EI CFIEK+G +TD
Sbjct: 129 RAYTRDLIQSFASQCEVNLVGSQHLARLAEAYIRGESVEEAVLKAEIAPCFIEKQGAKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IAR+AR L+P ++ D A+F S
Sbjct: 189 IVVLACTHYPFLANVFRKLAPWPVDWLDPAEAIARQARRLVPVVDEGAHSDDYDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLK 270
G+P + RLMQGFGL+
Sbjct: 249 GQPVFSTHRLMQGFGLR 265
>gi|253573241|ref|ZP_04850584.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846769|gb|EES74774.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 272
Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I I DSG+GGL V +++ +P IY D PYG ++ + ++
Sbjct: 4 QQAIAILDSGVGGLTVCKEVMRQLPREKIIYFGDTARAPYGPRSPEEVRLFTEQIVDYLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ P + VIACNTA D +++ + +G + P + A + T++G + ++ T T
Sbjct: 64 -QFHPKMIVIACNTATAAALDFIKAKV-DIPVIGVIHPGARAAISETKTGKVGVIGTVGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + + Q I + VE K E +E E + +
Sbjct: 122 IRSGAYTVALRELNPQTEIVSEACPEFVPLVEHGLYETK----EALHVVERSLREMKKQP 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D ++L CTHYP + +++ V + ++D AR +L + + H
Sbjct: 178 MDCLILGCTHYPFLKDPIQRVMGPNVKLISSADETAREISTILHQRGCLARGNGTPVHQF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
F SG ++ + Q G
Sbjct: 238 FCSGDAEMFRKIARQWLG 255
>gi|205374388|ref|ZP_03227186.1| glutamate racemase [Bacillus coahuilensis m4-4]
Length = 264
Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats.
Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 8/262 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I I DSG+GGL V++++ +P YV D PYG ++ L + +
Sbjct: 1 MNKPIGIIDSGVGGLTVVKEVMRQLPNERIYYVGDTARCPYGPRHTDEVRTFTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L +Y + +IACNTA ++ DE++ S+ +G + P + A +T+SG I +L T
Sbjct: 61 L-QYDIKMLIIACNTATAVVLDEIKHKL-SIPVIGVIDPGARAAIKHTKSGRIGVLGTNV 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + S VE E +K ++ +
Sbjct: 119 TVKSKAYDRALRTINRDVQVWSKSCPKFVPLVESGEYTGSFAEKIVKNTLQS----MKQH 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
D I+L CTHYPL+ + + + V + + D AR A +L + H
Sbjct: 175 PLDTIILGCTHYPLLEPIIQDVMGSNVKVISSGDETAREASAILDYQELIYAGDTKPAHR 234
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
F +G ++ ++
Sbjct: 235 FFTTGSVELFKNIAESWLEFEA 256
>gi|307709763|ref|ZP_07646214.1| glutamate racemase [Streptococcus mitis SK564]
gi|301794843|emb|CBW37299.1| glutamate racemase [Streptococcus pneumoniae INV104]
gi|307619465|gb|EFN98590.1| glutamate racemase [Streptococcus mitis SK564]
gi|332201291|gb|EGJ15362.1| glutamate racemase [Streptococcus pneumoniae GA47901]
Length = 264
Score = 314 bits (807), Expect = 6e-84, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253
>gi|52786718|ref|YP_092547.1| glutamate racemase [Bacillus licheniformis ATCC 14580]
gi|319647248|ref|ZP_08001470.1| RacE protein [Bacillus sp. BT1B_CT2]
gi|52349220|gb|AAU41854.1| RacE [Bacillus licheniformis ATCC 14580]
gi|317390595|gb|EFV71400.1| RacE protein [Bacillus sp. BT1B_CT2]
Length = 272
Score = 314 bits (807), Expect = 7e-84, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L I + DSG+GGL V +++ +P+ IY+ D PYG + + + + +
Sbjct: 2 LDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYLGDTKRCPYGPRDRKEVLSYTWEMTNYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L ++ + VIACNTA + +E+ ++ +G V P + A T++ I ++ T
Sbjct: 62 LSRHHIKMLVIACNTATAIALEEISREV-AIPVIGVVQPGARTAIKVTENQRIGVIGTEN 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + ++ + VE K ++ + +
Sbjct: 121 TIKSGAYEEALLSLNGDLTVENLACPMFVPFVESG----KFLDETADEIVRTSLHPLRDS 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA 249
D ++L CTHYP++ ++ V+ + + D AR +L T +H
Sbjct: 177 SIDTLILGCTHYPILKEPIQRYMGERVNIISSGDETAREVSTILSYNGLLSKTAEPPEHL 236
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
+G+ + FG +
Sbjct: 237 FLTTGERARFTKIANDWFGYE 257
>gi|222054462|ref|YP_002536824.1| glutamate racemase [Geobacter sp. FRC-32]
gi|221563751|gb|ACM19723.1| glutamate racemase [Geobacter sp. FRC-32]
Length = 283
Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 121/257 (47%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSG+GGL VL+++ ++P+ IY+ D PYG + + + S ++
Sbjct: 4 KAIGVFDSGVGGLTVLKEIMKVLPQEDTIYLGDTARVPYGTKSPETVVRYSRQITSFLVS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA + L+ F S+ +G + P ++AAA T+SG + ++ T T+
Sbjct: 64 R-DIKMLVVACNTASAVSLTALKKEF-SIPIVGVIEPGARRAAAVTRSGKVGVIGTAGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + I + + + EE +I + ++G + +
Sbjct: 122 KSSAYAKAIKRINPGIEVVTRACPLFVPLAEEGWIDNEIARLTAQTYLKG----LKEESV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
D +VL CTHYP++ + ++ V +D+++ A +L + + + T +H F
Sbjct: 178 DTLVLGCTHYPILKGIIAEVMGDGVTLVDSAEETAFTVAEILGKKSLLRPTSEKGNHHFF 237
Query: 252 LSGKPDIAMRRLMQGFG 268
++ P +R + G
Sbjct: 238 VTDVPAGFIRVGSRFLG 254
>gi|257482010|ref|ZP_05636051.1| glutamate racemase [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331008869|gb|EGH88925.1| glutamate racemase [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 271
Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats.
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG +
Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFI 58
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + ++ L V+ACNTA +R +P +G PA+K AA T+S
Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T TL+ + L+ + + + L +E + +I++ +
Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPKIRQLL 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 174 LHYVEPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLL 233
Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263
T D + S PD + L
Sbjct: 234 ATGDARDTVYWSSDIPDNFRKIL 256
>gi|104780103|ref|YP_606601.1| glutamate racemase [Pseudomonas entomophila L48]
gi|166231049|sp|Q1IEW8|MURI_PSEE4 RecName: Full=Glutamate racemase
gi|95109090|emb|CAK13787.1| glutamate racemase [Pseudomonas entomophila L48]
Length = 265
Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 5/255 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I + DSG+GGL VL +++ L+P +YVAD PYG +++RL +
Sbjct: 1 MNERSAPIGVMDSGVGGLSVLAEIQRLLPNETLLYVADSGHVPYGEKSPDYIRQRLRHIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ ++ + V+ACNTA +LR+ +P +G PA+K AAA T+SG++ +L+T
Sbjct: 61 GFLREQGAKAM-VLACNTATVATVADLRALYPDWPLVGMEPAVKPAAAATRSGVVGVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL+ + L+ + S + L +E + +++ + G
Sbjct: 120 TGTLQSAKFAALLDRFASDVRVITQPCPGLVECIEAG----DLTSPALRQLLAGYVQPLL 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D ++L CTHYP + + + P V +D ++AR+ + LL + +
Sbjct: 176 AQGCDTLILGCTHYPFLRPMLADMVPADVAIIDTGAAVARQLQRLLGERDLLADGPARET 235
Query: 249 ALFLSGKPDIAMRRL 263
A + S PD + L
Sbjct: 236 AFWTSADPDSLKKIL 250
>gi|315302795|ref|ZP_07873560.1| glutamate racemase [Listeria ivanovii FSL F6-596]
gi|313628832|gb|EFR97200.1| glutamate racemase [Listeria ivanovii FSL F6-596]
Length = 266
Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + +++ + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQIYYLGDTARCPYGPRDKEEVRQFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ + VIACNTA ++R+ + +G + P + A T++ I +L T
Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIRAKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + ++ S VE + K KK + + +
Sbjct: 119 TVESMAYPRALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
+ D ++L CTHYPL+ + V +++ + A LL N + H
Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDDVAVINSGEETASEVSALLDYHNLLDASDKEIQHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 235 FFTTGSTQIFQDIAXXWL 252
>gi|330887861|gb|EGH20522.1| glutamate racemase [Pseudomonas syringae pv. mori str. 301020]
Length = 271
Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats.
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG +
Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTTEFI 58
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + ++ L V+ACNTA +R +P +G PA+K AA T+S
Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T TL+ + L+ + + + L +E + +I++ +
Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRQLL 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 174 LHYVEPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLL 233
Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263
T D + S PD + L
Sbjct: 234 ATGDARDTVYWSSDIPDNFRKIL 256
>gi|327190530|gb|EGE57624.1| glutamate racemase protein (required for biosynthesis of
D-glutamate and peptidoglycan) [Rhizobium etli CNPAF512]
Length = 266
Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats.
Identities = 141/258 (54%), Positives = 188/258 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L
Sbjct: 9 KPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLT 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+ ++TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P I D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLIADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G+ D A RRLMQGFGL++
Sbjct: 249 GQQDFATRRLMQGFGLRA 266
>gi|13470360|ref|NP_101926.1| glutamate racemase [Mesorhizobium loti MAFF303099]
gi|14021099|dbj|BAB47712.1| glutamate racemase [Mesorhizobium loti MAFF303099]
Length = 276
Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats.
Identities = 131/258 (50%), Positives = 179/258 (69%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF +L
Sbjct: 17 DQPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILDLFVKLL 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D++ P +SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T+
Sbjct: 77 DRFAPAISVIACNTASTLVIDALRERFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTV 136
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E EG RT
Sbjct: 137 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEVYMREGFVDEEAVRAEIAPCFMEHEGLRT 196
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F
Sbjct: 197 DIVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFT 256
Query: 253 SGKPDIAMRRLMQGFGLK 270
SGK D A+ RLMQGFGL
Sbjct: 257 SGKTDFAIGRLMQGFGLS 274
>gi|222086155|ref|YP_002544687.1| glutamate racemase [Agrobacterium radiobacter K84]
gi|221723603|gb|ACM26759.1| glutamate racemase [Agrobacterium radiobacter K84]
Length = 266
Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats.
Identities = 138/258 (53%), Positives = 190/258 (73%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG+WE+ AL++R++ LF+ +L
Sbjct: 9 KPVLMFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGDWEEQALRERIVGLFAKLLA 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 DYDPEICIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ +QCH+ LV S LA E Y G + +D + E+ CF+E +G++TD
Sbjct: 129 RAYTRDLIQSFATQCHVRLVGSENLARIAEAYIRGGTVSDDAVLAEVGQCFVEMDGRKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P++ D A+F S
Sbjct: 189 IVVLACTHYPFMANIFRRLAPWPVDWLDPAEAIARRARSLVPQVADAVHPDTYDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G PD RRLMQGFGL++
Sbjct: 249 GTPDFPTRRLMQGFGLRA 266
>gi|86357929|ref|YP_469821.1| glutamate racemase [Rhizobium etli CFN 42]
gi|86282031|gb|ABC91094.1| glutamate racemase (required for biosynthesis of D-glutamate and
peptidoglycan) protein [Rhizobium etli CFN 42]
Length = 266
Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats.
Identities = 141/258 (54%), Positives = 188/258 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE F+YVADD GFPYG WE+ ALK+R++ LF +L
Sbjct: 9 KPVLVFDSGIGGLTVLREARVLMPERGFVYVADDAGFPYGGWEEQALKERIIGLFGKLLQ 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 DYHPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG +TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDEAVLAEIDQCFVEKEGYKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P + D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G PD A RRLMQGFGL++
Sbjct: 249 GNPDFATRRLMQGFGLRA 266
>gi|71733288|ref|YP_273271.1| glutamate racemase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71553841|gb|AAZ33052.1| glutamate racemase [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 271
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 10/263 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG +
Sbjct: 4 MQMSHA-----SDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFI 58
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + ++ L V+ACNTA +R +P +G PA+K AA T+S
Sbjct: 59 TERCLTIAGFFREQGAKAL-VVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRS 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T TL+ + L+ + + + L +E + +I++ +
Sbjct: 118 GVVGVLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLLSPQIRRLL 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 174 LHYVEPLLAACCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLL 233
Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263
T + + S PD + L
Sbjct: 234 ATGTARETMYWSSDIPDNFRKIL 256
>gi|229543635|ref|ZP_04432695.1| glutamate racemase [Bacillus coagulans 36D1]
gi|229328055|gb|EEN93730.1| glutamate racemase [Bacillus coagulans 36D1]
Length = 269
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V ++M +P YV D PYG +KK + +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEMMRQLPNETIYYVGDTARCPYGPRPVEEVKKFTWQMIRFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+DK Q + VIACNTA +I DE+R + LG + P + A +T++ I +L T
Sbjct: 61 MDK-QIKMLVIACNTATAVILDEVREELK-IPVLGVIYPGARAALKHTKNFRIGVLGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + I ++ VE I KK + +
Sbjct: 119 TIKSQAYERALKSINKKVKITALACPKFVPLVESGQYNSPIA----KKIVAETLYPIQNC 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHA 249
D ++L CTHYPL+ + + + V + + + AR LL + H
Sbjct: 175 GIDTVILGCTHYPLLGPIIKNVMGAGVSVISSGEETAREVSTLLYFHDLFNMEDTRQKHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ +G I
Sbjct: 235 FYTTGSSKIFAALASDWL 252
>gi|218463622|ref|ZP_03503713.1| glutamate racemase [Rhizobium etli Kim 5]
Length = 266
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 141/258 (54%), Positives = 190/258 (73%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+
Sbjct: 9 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLN 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+E++G++TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDALSDDAVLAEIDQCFVERDGQKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P I D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLIADAVHPDNFDFAMFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G+ D A RRLMQGFGLK+
Sbjct: 249 GQQDFATRRLMQGFGLKA 266
>gi|317129840|ref|YP_004096122.1| glutamate racemase [Bacillus cellulosilyticus DSM 2522]
gi|315474788|gb|ADU31391.1| glutamate racemase [Bacillus cellulosilyticus DSM 2522]
Length = 279
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V+ ++ +P+ IY+ D PYG + ++K + +
Sbjct: 1 MDRPIGVIDSGVGGLTVVSELIRQLPKEEIIYIGDTARCPYGPRPESEVRKYTWEMIDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L K + VIACNTA ++ +E + P + +G + P A T++ + ++ T
Sbjct: 61 LLK-DIKMLVIACNTATAVVLEEAKQQLP-IPVVGVIHPGTIAALKVTKTDHVGVIGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + ++ L VE DE + ++
Sbjct: 119 TINSGAYERELTMINHEVKVESLACPNLVPLVERGL----FSSDEASEIVKESLAPILST 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
R D ++L CTHYPL+ V R+++ V+ + + D AR LL + HA
Sbjct: 175 RIDSLILGCTHYPLLAPVIREIAGEKVEIICSGDETAREVSALLYHQELLFKEERIPKHA 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ +G D+ + Q
Sbjct: 235 FYSTGSSDMFEQIAKQWL 252
>gi|307707605|ref|ZP_07644086.1| glutamate racemase [Streptococcus mitis NCTC 12261]
gi|307616318|gb|EFN95510.1| glutamate racemase [Streptococcus mitis NCTC 12261]
Length = 264
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 109/268 (40%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVHSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253
>gi|148262569|ref|YP_001229275.1| glutamate racemase [Geobacter uraniireducens Rf4]
gi|146396069|gb|ABQ24702.1| glutamate racemase [Geobacter uraniireducens Rf4]
Length = 288
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY+ D PYG+ + + + S ++
Sbjct: 13 KAIGIFDSGVGGLTVLKEIIKTLPQEDTIYLGDTARVPYGSKSPETVTRYSRQITSFLVQ 72
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + V+ACNTA + L+ FP P ++AA+ T+SG + ++ T T++
Sbjct: 73 R-DIKMLVVACNTASAVSLAALKKEFPIPIVGVIEPGARRAASVTRSGKVGVIGTAGTIK 131
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I + + + + EE ++ + + + + D
Sbjct: 132 SSAYAKAIKRINPEIEVVTRACPLFVPLAEEGWVDNEVA----RLTAQAYLQGVKEEGVD 187
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
+VL CTHYP++ + ++ V +D+++ A +L + + +H F+
Sbjct: 188 TLVLGCTHYPILKGIIAEVMGGGVTLVDSAEETAFTVAEILRGKALLRPSSEKGNHHFFV 247
Query: 253 SGKPDIAMRRLMQGFG 268
+ P +R + G
Sbjct: 248 TDVPAGFIRVGNRFLG 263
>gi|229006826|ref|ZP_04164459.1| Glutamate racemase [Bacillus mycoides Rock1-4]
gi|228754448|gb|EEM03860.1| Glutamate racemase [Bacillus mycoides Rock1-4]
Length = 265
Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 115/259 (44%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + +
Sbjct: 2 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ + +G + P + A T + + I+ T
Sbjct: 62 LA-LDIKMLVIACNTATAVVLEEMQKQLK-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 TVKSGAYEDALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKNT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 176 EIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 235
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 236 FLTTGKIDLFKEIASKWFG 254
>gi|11386940|sp|Q9L4V5|MURI_CARST RecName: Full=Glutamate racemase
gi|8102037|gb|AAF72713.1|AF263927_1 glutamate racemase [Carnobacterium sp. St2]
Length = 268
Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 104/259 (40%), Gaps = 10/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V+++ +P YV D PYG + ++K + +L
Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEDQVRKFTWEMTHFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
DK + VIACNTA +++ ++ +G + P + A T + I ++ T T
Sbjct: 63 DK-NIKMLVIACNTATAAALKDIKKKL-AIPVIGVILPGSRAAIKATHTNRIGVIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +IHS ++ + ++ VE I KK + + +
Sbjct: 121 VKSNQYKKMIHSKDTKALVTSLACPKFVPLVESNEYSSAIA----KKVVAETLRPLKNEG 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDH 248
D ++L CTHYPL+ + + V +D+ +L N Q + +
Sbjct: 177 LDTLILGCTHYPLLRPIIQNTLGDSVTLIDSGAETVSEVSTILDYFNLAVDSQNKEKAER 236
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+ +G + +
Sbjct: 237 NFYTTGSSQMFHAIASEWL 255
>gi|39998014|ref|NP_953965.1| glutamate racemase [Geobacter sulfurreducens PCA]
gi|39984959|gb|AAR36315.1| glutamate racemase [Geobacter sulfurreducens PCA]
gi|298506955|gb|ADI85678.1| glutamate racemase [Geobacter sulfurreducens KN400]
Length = 272
Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ ++P+ IY+ D PYG + + + + S ++
Sbjct: 4 KAIGIFDSGVGGLTVLKEIIKVLPQEDTIYLGDTARVPYGTKSPETVTRYSLEIASFLVK 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA + L P P ++A A T++G + ++ T T+R
Sbjct: 64 R-DIKLLVVACNTASAASLEALTERLPIPVVGVIEPGARRAVATTRTGKVGVIGTEGTIR 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I + + + + EE ++ + + G + D
Sbjct: 123 SSAYAKAIKRLNPEVEVITRACPLFVPLAEEGWTDNEVARLTARTYLAG----LREQGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
IVL CTHYPL+ V + V +D+++ AR +L + + +H F+
Sbjct: 179 TIVLGCTHYPLLKRVIGETVGEDVRLVDSAEETARTVADILRGRDLLRPDGEQGNHHFFV 238
Query: 253 SGKPDIAMRRLMQGFG 268
+ P +R + G
Sbjct: 239 TDVPAGFIRVGNRFIG 254
>gi|289167204|ref|YP_003445471.1| glutamate racemase, COG0796 [Streptococcus mitis B6]
gi|288906769|emb|CBJ21603.1| glutamate racemase, COG0796 [Streptococcus mitis B6]
Length = 264
Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 109/268 (40%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVESDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDARPLHHRFYTTASSQSFAQIGEEWL 253
>gi|228993222|ref|ZP_04153143.1| Glutamate racemase [Bacillus pseudomycoides DSM 12442]
gi|228999271|ref|ZP_04158851.1| Glutamate racemase [Bacillus mycoides Rock3-17]
gi|228760468|gb|EEM09434.1| Glutamate racemase [Bacillus mycoides Rock3-17]
gi|228766548|gb|EEM15190.1| Glutamate racemase [Bacillus pseudomycoides DSM 12442]
Length = 271
Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 115/259 (44%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + +
Sbjct: 8 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEYL 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ + +G + P + A T + + I+ T
Sbjct: 68 LA-LDIKMLVIACNTATAVVLEEMQKQLK-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 126 TVKSGAYEDALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKNT 181
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 182 EIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 241
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 242 FLTTGKIDLFKEIASKWFG 260
>gi|209549543|ref|YP_002281460.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535299|gb|ACI55234.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 266
Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 143/258 (55%), Positives = 187/258 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF+ +L
Sbjct: 9 KPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFAKLLA 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T+R
Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMIFVGTVPAIKPAAERTRSGLVSVLATPGTVR 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+G +TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDGHKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPAAADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G D A RRLMQGFGL++
Sbjct: 249 GHQDFATRRLMQGFGLRA 266
>gi|325663116|ref|ZP_08151566.1| glutamate racemase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325470570|gb|EGC73800.1| glutamate racemase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 286
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 109/260 (41%), Gaps = 13/260 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E K I +FDSG+GGL V +++ +P +Y D PYG+ + + + +
Sbjct: 12 ENKKDMPIGVFDSGVGGLTVAREIMRQLPNESIVYFGDTARVPYGSKSETTIIRYSRQII 71
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+L K + VIACNTA L D +R F + +G V P + A T + I ++
Sbjct: 72 RFLLTK-EVKAIVIACNTASALALDAVRKEFK-IPIIGVVAPGARAAREETINKKIGVIG 129
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ LI + Q + + + VEE KI ++ I+ +
Sbjct: 130 TEATVKSEIYKKLIQAEDPQISVSGRACPLFVPLVEEGFAKHKIT----REVIDIYLSDM 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT----- 242
D ++L CTHYPL+ R+ + ++ + A + LL +
Sbjct: 186 RESDIDTLILGCTHYPLLRSTIREYMGEKIHLVNPAYETAMDLKRLLEEEEMLRDAPVNG 245
Query: 243 -RVFDDHALFLSGKPDIAMR 261
+++ ++S D +
Sbjct: 246 QEEHGEYSFYVSDAADKFKQ 265
>gi|148989674|ref|ZP_01821006.1| glutamate racemase [Streptococcus pneumoniae SP6-BS73]
gi|147924991|gb|EDK76073.1| glutamate racemase [Streptococcus pneumoniae SP6-BS73]
Length = 264
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGAKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253
>gi|319789116|ref|YP_004150749.1| glutamate racemase [Thermovibrio ammonificans HB-1]
gi|317113618|gb|ADU96108.1| glutamate racemase [Thermovibrio ammonificans HB-1]
Length = 262
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 17/261 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D+ P I +FDSG+GGL VL+ +R L+P+ + IY D PYG + K
Sbjct: 1 MDDRP--------IGVFDSGVGGLTVLKALRELLPDENLIYFGDTARVPYGTKSPKTIIK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + +L+ Y + V+ACNT+ + L+ FP P K+A T +
Sbjct: 53 FSIQN-TKLLESYGVKMVVVACNTSSAHALEILQEEFPFPVVGVVEPGAKEAVKSTDNRR 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ ++ T AT++ I S C + + + +EE + + ++
Sbjct: 112 VGVIGTEATVKSEAYRKAIVSLDPFCTVFQKACPLFVPLIEEGWLKDPVTLEVARR---- 167
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
E + D +VL CTHYPLI V ++ P + +D+++++AR + LLP +
Sbjct: 168 YLGEFKEFNVDTLVLGCTHYPLIKEVIGEVLP-GIRLVDSAEAVAREVKRLLPYR---RK 223
Query: 243 RVFDDHALFLSGKPDIAMRRL 263
+ +S K + R
Sbjct: 224 GSGGAIKVLVSDKTERFERIA 244
>gi|110633622|ref|YP_673830.1| glutamate racemase [Mesorhizobium sp. BNC1]
gi|110284606|gb|ABG62665.1| glutamate racemase [Chelativorans sp. BNC1]
Length = 274
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 129/257 (50%), Positives = 182/257 (70%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ IL FDSGIGGL V+++ R L+PE+ ++YVADD FPYG WE+ AL+ RL+ LF ++
Sbjct: 8 SPILFFDSGIGGLSVVKEARVLLPEHPYVYVADDAAFPYGAWEEGALRARLVELFGSLIA 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P L VIACNTA TL +LR+ +PS F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 68 RFAPSLIVIACNTASTLAIADLRAAYPSQLFVGTVPAIKPAAERTRSGLVSVLATPGTVK 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI +Y ++CH+ LV S LAS E+Y + E+ ++KEIE CF+E++G+RTD
Sbjct: 128 RQYTRDLISAYAAKCHVRLVGSENLASLAEKYMREGFVDEEAVRKEIEPCFMERDGQRTD 187
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP +V+ R+++PWPVDW+D S++IARRA L + D A F S
Sbjct: 188 IVVLACTHYPFLVNRMRKMAPWPVDWIDTSEAIARRALTLAETLPPPARPDLPDRACFTS 247
Query: 254 GKPDIAMRRLMQGFGLK 270
G P ++RRL GFG +
Sbjct: 248 GNPPASLRRLASGFGFR 264
>gi|307705571|ref|ZP_07642423.1| glutamate racemase [Streptococcus mitis SK597]
gi|307620848|gb|EFN99932.1| glutamate racemase [Streptococcus mitis SK597]
Length = 264
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 109/268 (40%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A + G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSPGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253
>gi|229087049|ref|ZP_04219201.1| Glutamate racemase [Bacillus cereus Rock3-44]
gi|228696242|gb|EEL49075.1| Glutamate racemase [Bacillus cereus Rock3-44]
Length = 265
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ + +
Sbjct: 2 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LA-LDIKMLVIACNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIG 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ + ++ VE + + +++ ++ +
Sbjct: 120 TVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESAMAYEVVRETLQ----PLKTT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHA 249
D ++L CTHYP++ V +++ V + + D AR +L ++ DH
Sbjct: 176 EIDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 235
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 236 FLTTGKIDLFKEIASKWFG 254
>gi|322377632|ref|ZP_08052122.1| glutamate racemase [Streptococcus sp. M334]
gi|321281397|gb|EFX58407.1| glutamate racemase [Streptococcus sp. M334]
Length = 264
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ I+ + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKINDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDVGPLHHRFYTTASSQSFAQIGEEWL 253
>gi|190892000|ref|YP_001978542.1| glutamate racemase (required for biosynthesis of D-glutamate and
peptidoglycan) [Rhizobium etli CIAT 652]
gi|190697279|gb|ACE91364.1| glutamate racemase protein (required for biosynthesis of
D-glutamate and peptidoglycan) [Rhizobium etli CIAT 652]
Length = 266
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 139/258 (53%), Positives = 188/258 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L
Sbjct: 9 KPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLT 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QC++ LV S LA E Y G + +D + EI+ CF+EK+ ++TD
Sbjct: 129 RAYTRDLIQSFAQQCNVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P + D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G+ D A RRLMQGFGL++
Sbjct: 249 GQQDFATRRLMQGFGLRA 266
>gi|20177985|sp|Q98NP9|MURI_RHILO RecName: Full=Glutamate racemase
Length = 262
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 131/258 (50%), Positives = 179/258 (69%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF +L
Sbjct: 3 DQPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILDLFVKLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D++ P +SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T+
Sbjct: 63 DRFAPAISVIACNTASTLVIDALRERFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E EG RT
Sbjct: 123 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEVYMREGFVDEEAVRAEIAPCFMEHEGLRT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F
Sbjct: 183 DIVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFT 242
Query: 253 SGKPDIAMRRLMQGFGLK 270
SGK D A+ RLMQGFGL
Sbjct: 243 SGKTDFAIGRLMQGFGLS 260
>gi|166368300|ref|YP_001660573.1| glutamate racemase [Microcystis aeruginosa NIES-843]
gi|226722987|sp|B0JGW5|MURI_MICAN RecName: Full=Glutamate racemase
gi|166090673|dbj|BAG05381.1| glutamate racemase [Microcystis aeruginosa NIES-843]
Length = 283
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 8/258 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL VL+++ +P+ +Y AD PYG + + ++ + + + +
Sbjct: 7 SPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGTRSKGEIIEFVLEILTWMSE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ + ++ACNT+ L +E+++ F + LG + P K A + I ++STPAT
Sbjct: 67 RR-VKMVIMACNTSSALALEEVQAEFKDLPILGVILPGAKTAVQ--KGKRIGVISTPATA 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + +E ++ ++ E
Sbjct: 124 KSNAYKQAIQEIDPTAQVWQIPCPEFVPLIEANRIFDPYTTQVAREYLQPLLAE----NI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHY + V R+L P V +D + S+ R A L + +
Sbjct: 180 DTLVYGCTHYRHLSPVLRRLLPSSVRLVDPAASVVRAAEKELELLGLKNPETPLPTNFAV 239
Query: 253 SGKPDIAMRRLMQGFGLK 270
SG PD R Q G
Sbjct: 240 SGDPDTFARLSRQWLGFS 257
>gi|38174839|emb|CAD70220.1| glutamate racemase [Microcystis aeruginosa PCC 7806]
gi|159027640|emb|CAO89504.1| murI [Microcystis aeruginosa PCC 7806]
Length = 270
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 8/258 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL VL+++ +P+ +Y AD PYG + + + + + +
Sbjct: 7 SPIGVFDSGVGGLTVLRELYKQLPQESILYFADTARLPYGTRSKGEIIEFVREILTWM-G 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+++ + ++ACNT+ L +E+R+ F + LG + P K A Q I ++STPAT
Sbjct: 66 EHRVKMVIMACNTSSALALEEVRAEFKDLPILGVILPGAKTAVK--QGKRIGVISTPATA 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + +E ++ ++ E
Sbjct: 124 KSNAYKQAIQEIDPTAQVWQIPCPEFVPLIEANRIFDPYTTQVAREYLQPLLAE----NI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHY + V R+L P V +D + ++ R A L + +
Sbjct: 180 DTLVYGCTHYRHLSPVLRRLLPSSVRLVDPAAAVVRAAEKELELLGLKNPETSLPTNFAV 239
Query: 253 SGKPDIAMRRLMQGFGLK 270
SG PD R Q G
Sbjct: 240 SGDPDTFARLSRQWLGFS 257
>gi|118588604|ref|ZP_01546012.1| glutamate racemase [Stappia aggregata IAM 12614]
gi|118438590|gb|EAV45223.1| glutamate racemase [Stappia aggregata IAM 12614]
Length = 264
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 128/258 (49%), Positives = 174/258 (67%), Gaps = 1/258 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+L FDSG+GGL VL++ R+L+P +YVADD FP G W + LK R++ LF D++
Sbjct: 4 SGPVLFFDSGLGGLTVLREARYLLPYEPLLYVADDAAFPIGRWPEAELKARIVSLFGDLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ P VIACNTAFTL D LR P + F+G VPAIK AA T SGLIS+L+TP T+
Sbjct: 64 AEHGPKAVVIACNTAFTLAGDALREAHPDVPFVGTVPAIKPAAERTSSGLISVLATPGTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
RRTYT +LI S+ SQCH+ LV S +LA E++ G + +D + EI CF+E++GKRT
Sbjct: 124 RRTYTRSLIDSFASQCHVRLVGSDMLAELAEKHLRGETVSDDALLPEIADCFLEQDGKRT 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALF 251
D++VLACTHYP + + FR+++PWPVDWLD +++IAR+ +L H R D A+F
Sbjct: 184 DIVVLACTHYPFLANRFRKIAPWPVDWLDPAEAIARQLVRVLGEEAARHPARNLPDRAIF 243
Query: 252 LSGKPDIAMRRLMQGFGL 269
SG D + RL+ GFGL
Sbjct: 244 TSGSKDPGLARLLAGFGL 261
>gi|319784057|ref|YP_004143533.1| glutamate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169945|gb|ADV13483.1| glutamate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 266
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 130/261 (49%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IL+FDSGIGGL VL++ R LMP+ FIYVADD FPYG WE+ AL+ ++ LF +L
Sbjct: 3 ERPILMFDSGIGGLTVLREARVLMPDRRFIYVADDAAFPYGAWEEPALRVHILELFGKLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++ P +SVIACNTA TL+ D LR FP F+G VPAIK AA T+SGL+S+L+TP T+
Sbjct: 63 ERFAPAISVIACNTASTLVIDALRDRFPEHPFVGMVPAIKPAAERTRSGLVSVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E++ RT
Sbjct: 123 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEIYMREGFVDEEAVRAEITPCFVERDALRT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT----RVFDDH 248
D++VLACTHYP + + R+ +PWPVDWLD +++IARRA LL I+ D
Sbjct: 183 DIVVLACTHYPFLANRMRKTAPWPVDWLDPAEAIARRALSLLADIDPSGRGEMLPEGPDL 242
Query: 249 ALFLSGKPDIAMRRLMQGFGL 269
A+F S + D RRLMQGFGL
Sbjct: 243 AVFTSKRADFPTRRLMQGFGL 263
>gi|78221768|ref|YP_383515.1| glutamate racemase [Geobacter metallireducens GS-15]
gi|123572676|sp|Q39Y84|MURI_GEOMG RecName: Full=Glutamate racemase
gi|78193023|gb|ABB30790.1| glutamate racemase [Geobacter metallireducens GS-15]
Length = 276
Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY D PYG + + + + S ++
Sbjct: 10 KAIGIFDSGVGGLTVLKEIIKALPQEDTIYFGDTARVPYGTKSPETVTRYSLEIASFLVH 69
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA + L+ T S+ +G + P ++AAA T+SG + ++ T T+
Sbjct: 70 R-DIKLLVVACNTASACALEALQQTL-SIPVVGVIEPGARRAAAVTRSGRVGVIGTEGTI 127
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + I + + + + EE ++ + + G
Sbjct: 128 RSSAYAKAIKRINPEVEVVTRACPLFVPLAEEGWTDNEVAHLTARTYLSG----LREAGV 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
D +VL CTHYPL+ V + V +D+++ AR +L + T +H F
Sbjct: 184 DTLVLGCTHYPLLKRVIGETIGEEVKLVDSAEETARIVAEILRGGELLRPTSEQGNHHYF 243
Query: 252 LSGKPDIAMRRLMQGFG 268
+S P +R + G
Sbjct: 244 VSDVPAGFIRVGNRFLG 260
>gi|289434486|ref|YP_003464358.1| hypothetical protein lse_1119 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170730|emb|CBH27270.1| murI [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313633648|gb|EFS00406.1| glutamate racemase [Listeria seeligeri FSL N1-067]
gi|313638209|gb|EFS03457.1| glutamate racemase [Listeria seeligeri FSL S4-171]
Length = 266
Score = 311 bits (799), Expect = 4e-83, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + +++ + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVRQFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ + VIACNTA ++R+ + +G + P + A T++ I +L T
Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIRAKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + ++ S VE + K KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
+ D ++L CTHYPL+ + V +++ + A LL N + H
Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDDVAVINSGEETASEVSALLDYHNLLDASDKEIQHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 235 FFTTGSTQIFQDIAKDWL 252
>gi|323703720|ref|ZP_08115360.1| glutamate racemase [Desulfotomaculum nigrificans DSM 574]
gi|323531308|gb|EGB21207.1| glutamate racemase [Desulfotomaculum nigrificans DSM 574]
Length = 268
Score = 311 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 74/244 (30%), Positives = 125/244 (51%), Gaps = 9/244 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++R L+P IY AD PYG+ + +++R + + +L
Sbjct: 5 APIGIFDSGVGGLSVAREIRRLLPMEDIIYYADSAFCPYGDKDPEVIRRREIAIVDFLLS 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + V+ACNTA + D+LR FP + +G PA+K A A T++G I IL+T T+
Sbjct: 65 QGA-KMIVVACNTASSTGLDDLRKMFP-VPIVGMEPAVKPAVAATRNGKIGILATSVTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
++LI + ++ L RVE ++ + E +K + G ++ D
Sbjct: 123 GERLASLIKRFAEHVNVITQPCPGLVERVEHG----QLDDPETEKILAGFLKPILEQQAD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHALF 251
IVL CTHYP + + ++ + +D +++A++ +L N H+ RV + F
Sbjct: 179 TIVLGCTHYPFLTPLIEKIVGPNIAIIDTGEAVAKQVSRVLNEHNLAVHEPRVGQE-KFF 237
Query: 252 LSGK 255
SG
Sbjct: 238 TSGN 241
>gi|148984333|ref|ZP_01817628.1| glutamate racemase [Streptococcus pneumoniae SP3-BS71]
gi|149003922|ref|ZP_01828736.1| glutamate racemase [Streptococcus pneumoniae SP14-BS69]
gi|147758062|gb|EDK65067.1| glutamate racemase [Streptococcus pneumoniae SP14-BS69]
gi|147923622|gb|EDK74735.1| glutamate racemase [Streptococcus pneumoniae SP3-BS71]
gi|301800660|emb|CBW33304.1| glutamate racemase [Streptococcus pneumoniae OXC141]
Length = 264
Score = 311 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 109/268 (40%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG + +
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIGE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + VIACNTA ++ +E+++ + LG + P A +Q G
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL-DIPVLGVILPGASAAIKSSQGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T++ IH + ++ A VE A + + + + +
Sbjct: 111 KIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PLV-----GKVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
R H + + + +
Sbjct: 226 GRDAGPLHHRFYTTASSQSFAQIGEEWL 253
>gi|315122618|ref|YP_004063107.1| glutamate racemase [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496020|gb|ADR52619.1| glutamate racemase [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 271
Score = 311 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 190/263 (72%), Positives = 226/263 (85%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+K +N I+IFDSGIGGL VLQK+RFLMPEYHFIYVADD GFPYGNWED+ALK+RL+FL
Sbjct: 8 VKKNPKNCIMIFDSGIGGLSVLQKVRFLMPEYHFIYVADDSGFPYGNWEDNALKERLLFL 67
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
F+DIL+KY+PVLS++ACNTAFTL+KDELRSTFPSM FLGAVPAIKQA YT +GL+S+LS
Sbjct: 68 FADILEKYKPVLSIVACNTAFTLVKDELRSTFPSMLFLGAVPAIKQATVYTSTGLVSVLS 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPATLRR YT +LI SY S+C I+LVSS LAS E+Y CG +KED I++EI+GCF+EK
Sbjct: 128 TPATLRRAYTDDLIRSYASKCQINLVSSTTLASIAEDYTCGKIVKEDGIQREIQGCFLEK 187
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
EG+RTDV+VLACTHYP + H+FR+LSPWPVDWLD S SIARRAR LLP I ++ + DD
Sbjct: 188 EGRRTDVVVLACTHYPFMTHIFRRLSPWPVDWLDTSYSIARRARSLLPVIAMNEVGLSDD 247
Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270
+F+S KPDIAM+RLMQGFGLK
Sbjct: 248 QVVFISRKPDIAMQRLMQGFGLK 270
>gi|322373870|ref|ZP_08048405.1| glutamate racemase [Streptococcus sp. C150]
gi|321277242|gb|EFX54312.1| glutamate racemase [Streptococcus sp. C150]
Length = 271
Score = 311 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 111/269 (41%), Gaps = 18/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESVVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K + VIACNTA ++ +E++ + LG V P A +QSG
Sbjct: 53 YTWQLVRFLLTK-NVKMIVIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSQSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I Q + + A VE +IK KK +
Sbjct: 111 KIGVIGTPMTIASNIYEQKIKRLAPQMAVLSLPCPRFAPIVESN----EIKSSVAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ESMAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268
+R +D + + Q G
Sbjct: 226 SREVEDKTEEYYTTASVRGFKEIADQWLG 254
>gi|69246346|ref|ZP_00603902.1| Glutamate racemase [Enterococcus faecium DO]
gi|257878166|ref|ZP_05657819.1| glutamate racemase [Enterococcus faecium 1,230,933]
gi|257881050|ref|ZP_05660703.1| glutamate racemase [Enterococcus faecium 1,231,502]
gi|257889635|ref|ZP_05669288.1| glutamate racemase [Enterococcus faecium 1,231,410]
gi|257892425|ref|ZP_05672078.1| glutamate racemase [Enterococcus faecium 1,231,408]
gi|258616328|ref|ZP_05714098.1| glutamate racemase [Enterococcus faecium DO]
gi|289565821|ref|ZP_06446263.1| glutamate racemase [Enterococcus faecium D344SRF]
gi|293563127|ref|ZP_06677592.1| glutamate racemase [Enterococcus faecium E1162]
gi|293569788|ref|ZP_06680875.1| glutamate racemase [Enterococcus faecium E1071]
gi|294614005|ref|ZP_06693935.1| glutamate racemase [Enterococcus faecium E1636]
gi|294617100|ref|ZP_06696766.1| glutamate racemase [Enterococcus faecium E1679]
gi|294623311|ref|ZP_06702173.1| glutamate racemase [Enterococcus faecium U0317]
gi|68195299|gb|EAN09750.1| Glutamate racemase [Enterococcus faecium DO]
gi|257812394|gb|EEV41152.1| glutamate racemase [Enterococcus faecium 1,230,933]
gi|257816708|gb|EEV44036.1| glutamate racemase [Enterococcus faecium 1,231,502]
gi|257825995|gb|EEV52621.1| glutamate racemase [Enterococcus faecium 1,231,410]
gi|257828804|gb|EEV55411.1| glutamate racemase [Enterococcus faecium 1,231,408]
gi|289162364|gb|EFD10222.1| glutamate racemase [Enterococcus faecium D344SRF]
gi|291587536|gb|EFF19413.1| glutamate racemase [Enterococcus faecium E1071]
gi|291593112|gb|EFF24691.1| glutamate racemase [Enterococcus faecium E1636]
gi|291596637|gb|EFF27864.1| glutamate racemase [Enterococcus faecium E1679]
gi|291597279|gb|EFF28468.1| glutamate racemase [Enterococcus faecium U0317]
gi|291604905|gb|EFF34374.1| glutamate racemase [Enterococcus faecium E1162]
Length = 277
Score = 311 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + + ++
Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T
Sbjct: 71 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + V + + ++ S VE + KK + K+
Sbjct: 129 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 185 IDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 244
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 245 FYTTGSAKLFEEIAEDWLGI 264
>gi|313497102|gb|ADR58468.1| Glutamate racemase [Pseudomonas putida BIRD-1]
Length = 265
Score = 311 bits (799), Expect = 6e-83, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL +++ L+P +YV D PYG +++R +
Sbjct: 5 SAPIGVMDSGVGGLSVLAEIQRLLPNETLLYVGDCGHIPYGEKSPDYIRERCRHIAGFFH 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL
Sbjct: 65 EQGAKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ ++G
Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIETG----DLASPALRQMLQGYVQPLLAAGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + + P V +D ++AR+ R LL + +
Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPDDVAIIDTGAAVARQLRRLLGANDLLAEGPAGAARFWT 239
Query: 253 SGKPDIAMRRL 263
S P+ + L
Sbjct: 240 SADPEALRKIL 250
>gi|218961215|ref|YP_001740990.1| Glutamate racemase [Candidatus Cloacamonas acidaminovorans]
gi|167729872|emb|CAO80784.1| Glutamate racemase [Candidatus Cloacamonas acidaminovorans]
Length = 267
Score = 311 bits (799), Expect = 6e-83, Method: Composition-based stats.
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 14/262 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I IFDSG+GGL V Q +R P IY D PYG + + + +
Sbjct: 1 MKRAIGIFDSGVGGLTVYQAIRNTFPNEDIIYFGDTARVPYGPKSPNTIIDYSLQNARFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + + ++ACNT+ + L++ + +G + P +Q+ T+ I ++ T
Sbjct: 61 L-QQGIKILIVACNTSSAVAIPALQN-LSDIPVIGVIEPGAEQSVKVTKCKRIGVIGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + I + + + + + VEE + E E E + +
Sbjct: 119 TIRSGAYPSAIRKLLPEAFVVSSACPLFVPLVEEGWQEHPVAE----VIAEEYLKEMKEQ 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYPL+ ++ +Q+ V +D++ ++A C L N Q
Sbjct: 175 NIDTLVLGCTHYPLLSNIIQQVMGEEVTLVDSAMAVAEYLSCYLSAENDGQKGRDS---F 231
Query: 251 FLSGK----PDIAMRRLMQGFG 268
++S +IA R L G
Sbjct: 232 YVSDNENKFAEIAERILQHNIG 253
>gi|206889915|ref|YP_002249185.1| glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741853|gb|ACI20910.1| glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 270
Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 7/251 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+++ L+P IY+ D PYG + K + S +
Sbjct: 3 EKPVGIFDSGVGGLTVLKEIAKLLPNEELIYLGDTARVPYGIRSAETVIKYSIECASFLF 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V+ACNT+ ++ + L+ P P ++ A T++G I I+ T AT+
Sbjct: 63 KKG-IKILVVACNTSSSVSLEVLKEKLPIAVIGVIEPGVRAALKATKNGKIGIIGTEATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I S + + + + VEE I E + E E +
Sbjct: 122 QSGAYPKKIKSIEPEIEVISKACPLFVPLVEEGILEGSIAELIV----ERYLKELKNSGI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D ++L CTHYPL+ ++ + +D+++ I+R + +L + +
Sbjct: 178 DTLILGCTHYPLLKKTIQKYM-EGIQLVDSAEEISREVKEMLSYQGLINEKTNSGGKTFY 236
Query: 252 LSGKPDIAMRR 262
++ PD +
Sbjct: 237 VTDSPDRFKKI 247
>gi|77460966|ref|YP_350473.1| glutamate racemase [Pseudomonas fluorescens Pf0-1]
gi|77384969|gb|ABA76482.1| putative glutamate racemase [Pseudomonas fluorescens Pf0-1]
Length = 263
Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 5/245 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL +++ L+P +Y+ D PYG +++R +
Sbjct: 3 EAPIAVFDSGVGGLSVLAEIQQLLPNESLLYLGDCGHIPYGEKTPEFIRQRCSVMAGFFR 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L VIACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL
Sbjct: 63 EQGAKAL-VIACNTATVAGVADLRRDFPEWPIVGMEPAVKPAAAATRSGVVGVLATTGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ ++
Sbjct: 122 QSAKFAALLDRFATDVRVITQPCPGLVELIESG----DLHSPQLRALLKHYVDPLLANGC 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + + + P + +D ++AR+ + LL + +
Sbjct: 178 DTIILGCTHYPFLKPMLKSMIPESISLIDTGAAVARQLQRLLAERDLLAEGPNRPVRFWT 237
Query: 253 SGKPD 257
S P+
Sbjct: 238 SADPE 242
>gi|257884711|ref|ZP_05664364.1| glutamate racemase [Enterococcus faecium 1,231,501]
gi|257820549|gb|EEV47697.1| glutamate racemase [Enterococcus faecium 1,231,501]
Length = 277
Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + + ++
Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
D+ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T
Sbjct: 71 DQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + V + + ++ S VE + KK + K+
Sbjct: 129 VKSRAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 185 IDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 244
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 245 FYTTGSAKLFEEIAEDWLGI 264
>gi|26987472|ref|NP_742897.1| glutamate racemase [Pseudomonas putida KT2440]
gi|38258012|sp|Q88PW2|MURI_PSEPK RecName: Full=Glutamate racemase
gi|24982136|gb|AAN66361.1|AE016264_5 glutamate racemase [Pseudomonas putida KT2440]
Length = 265
Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL +++ L+P +YV D PYG +++R +
Sbjct: 5 SAPIGVMDSGVGGLSVLAEIQRLLPNETLLYVGDCGHIPYGEKSPDYIRERCRRIAGFFH 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL
Sbjct: 65 EQGAKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ ++G
Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIEAG----DLVSPAVRQLLQGYVQPLLAAGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + + P V +D ++AR+ + LL + +
Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPDDVAIIDTGAAVARQLQRLLGANDLLAEGPAGAARFWT 239
Query: 253 SGKPDIAMRRL 263
S P+ + L
Sbjct: 240 SADPEALRKIL 250
>gi|315648539|ref|ZP_07901638.1| glutamate racemase [Paenibacillus vortex V453]
gi|315276233|gb|EFU39579.1| glutamate racemase [Paenibacillus vortex V453]
Length = 268
Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I I DSG+GGL V +++ +P IY D PYG ++ + +
Sbjct: 1 MQQAIAILDSGVGGLTVAKEVMRQLPREKIIYFGDTARAPYGPRTPEEVRLFTEQIVDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ +Y P + VIACNTA D + S S+ +G + P + A + T++G + ++ T
Sbjct: 61 I-QYDPKMIVIACNTATAAALDYISSKV-SVPVIGVIHPGARAAISATKTGNVGVIGTTG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + + L VE K +++ + G +
Sbjct: 119 TIGSGAYTAALKQLSPYVEVQSQACPKLVPLVEHGLFRSKESLQVVQESLRGI----KDT 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHA 249
D ++L CTHYP + + + + V + ++D AR +L + + H
Sbjct: 175 SIDCLILGCTHYPFLRNTIQTVMGPAVKLISSADETAREVSTILYDKGQLASSEESPVHQ 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G P I + G
Sbjct: 235 FFCTGDPVIFQSIATEWLG 253
>gi|151567725|pdb|2JFU|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate
Racemase In Complex With Phosphate
gi|151567726|pdb|2JFV|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate
Racemase In Complex With Citrate
gi|151567727|pdb|2JFW|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate
Racemase In Complex With Tartrate
Length = 291
Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + + ++
Sbjct: 25 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T
Sbjct: 85 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 142
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + V + + ++ S VE + KK + K+
Sbjct: 143 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 198
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 199 IDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 258
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 259 FYTTGSAKLFEEIAEDWLGI 278
>gi|313890894|ref|ZP_07824518.1| glutamate racemase [Streptococcus pseudoporcinus SPIN 20026]
gi|313120792|gb|EFR43907.1| glutamate racemase [Streptococcus pseudoporcinus SPIN 20026]
Length = 264
Score = 311 bits (798), Expect = 8e-83, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P + +YV D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPYENIVYVGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + ++ K + V ACNTA + +E++ + LG + P A T G
Sbjct: 53 YTWELVNFLVTK-NVKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE +I+ KK +
Sbjct: 111 HVGVIGTPMTVTSDIYRQKIQLLAPAVEVISLACPKFVPIVESN----EIQSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINS 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
+R + H + + P+I
Sbjct: 226 SRYQEKVRHYFYTTASPEIFQEIASVWL 253
>gi|114707294|ref|ZP_01440191.1| glutamate racemase [Fulvimarina pelagi HTCC2506]
gi|114537175|gb|EAU40302.1| glutamate racemase [Fulvimarina pelagi HTCC2506]
Length = 262
Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats.
Identities = 131/259 (50%), Positives = 182/259 (70%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
ILI DSG+GGL VL++ R LMP+ F+YVADD GFPYGNWE+ AL+ RL+ LF D++
Sbjct: 3 DAPILILDSGVGGLTVLREARVLMPDRRFVYVADDAGFPYGNWEEDALRDRLVALFGDLI 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++P+ VIACNTA TL + LR ++P M F+G VPAIK AA T+SGL+S+L+TP T+
Sbjct: 63 VAHEPLACVIACNTASTLALNALRQSYPRMKFVGTVPAIKPAAERTRSGLVSVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
RR YT +LI + S+ + LV S+ LAS E Y G + E + EI CFIE+ G+RT
Sbjct: 123 RRQYTQDLIDQWASRVSVKLVGSVALASLAERYMRGGFVDEQAVLAEIAPCFIEENGRRT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D++VLACTHYP +V+ R+++PWPVDWLD +++IAR+A ++ T D A+F
Sbjct: 183 DIVVLACTHYPFLVNRMRKMAPWPVDWLDPAEAIARQADRVVGDAGTRSMHGDFDPAVFT 242
Query: 253 SGKPDIAMRRLMQGFGLKS 271
SG PD A +R+++GFGL++
Sbjct: 243 SGAPDYATQRIVRGFGLRT 261
>gi|257869444|ref|ZP_05649097.1| glutamate racemase [Enterococcus gallinarum EG2]
gi|257803608|gb|EEV32430.1| glutamate racemase [Enterococcus gallinarum EG2]
Length = 270
Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 105/262 (40%), Gaps = 10/262 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P H IY+ D PYG + + + +L
Sbjct: 4 KQPIGFIDSGVGGLTVVKEAIKQLPNEHIIYLGDTARCPYGPRPAEQVIEYTWQMTEFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + VIACNTA + +E++ S+ +G + P + A T++ I ++ T T
Sbjct: 64 -QQNIKMLVIACNTATAVALEEIKEKL-SIPVIGVILPGSRAAVKATKNQQIGVIGTAGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I + + ++ A VE + KK + + K+
Sbjct: 122 IKSNAYEEAIKLKSPRSVVVSLACPKFAPIVESNQAQSSVA----KKIVAETLRPLKNKK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDH 248
D ++L CTHYPL+ + + + +D+ LL NT Q ++
Sbjct: 178 LDTLILGCTHYPLLRSLIQNEMGSQIQLIDSGAETVGEVSMLLDYFAIANTSQMTQEPEY 237
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
+ +G + + +
Sbjct: 238 FFYTTGSTKLFDEIANEWLNVP 259
>gi|2462086|emb|CAA70886.1| putative glutamate racemase protein [Bacillus cereus ATCC 10987]
Length = 269
Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 2 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEH 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+LD + VIA NTA ++ +E++ P + +G + P + A T + + I+ T
Sbjct: 62 LLD-LNIKMLVIAMNTATAVVLEEMQKQLP-IPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE ++ + +++ ++ +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQ----PLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L ++ DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|303238403|ref|ZP_07324938.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
gi|302594107|gb|EFL63820.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
Length = 268
Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 14/259 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSGIGGL VL+++ L+P+ +Y D PYG + K
Sbjct: 1 MDNRP--------IGVFDSGIGGLTVLKEINRLLPQESVVYFGDSGRAPYGTKSKETVIK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
L + VIACNTA D ++ +F P AA T++
Sbjct: 53 YTFQDI-RFLQNQDIKMIVIACNTASACSLDRVKHSFDFPIVEVVQPGSAAAAKETRNNR 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ ++ TPAT+ I S I + VEE +I K E
Sbjct: 112 VGVIGTPATISSGVYEKAITRINSSIEIFSKPCPMFVPLVEEGWWENEIA----FKIAEE 167
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ + D +VL CTHYPL+ + +++ V ++++ +A+ + + N +
Sbjct: 168 YLLPLKELDIDTLVLGCTHYPLLQNTIQKVMGDDVKLVNSALEVAKVVKEGIEENNNGRD 227
Query: 243 -RVFDDHALFLSGKPDIAM 260
+V + S +
Sbjct: 228 EKVSPVCRFYTSDSVEKFE 246
>gi|260559213|ref|ZP_05831399.1| glutamate racemase [Enterococcus faecium C68]
gi|261207746|ref|ZP_05922431.1| glutamate racemase [Enterococcus faecium TC 6]
gi|314939892|ref|ZP_07847098.1| glutamate racemase [Enterococcus faecium TX0133a04]
gi|314943739|ref|ZP_07850478.1| glutamate racemase [Enterococcus faecium TX0133C]
gi|314949695|ref|ZP_07853013.1| glutamate racemase [Enterococcus faecium TX0082]
gi|314953241|ref|ZP_07856180.1| glutamate racemase [Enterococcus faecium TX0133A]
gi|314993679|ref|ZP_07859027.1| glutamate racemase [Enterococcus faecium TX0133B]
gi|314997404|ref|ZP_07862355.1| glutamate racemase [Enterococcus faecium TX0133a01]
gi|260074970|gb|EEW63286.1| glutamate racemase [Enterococcus faecium C68]
gi|260078129|gb|EEW65835.1| glutamate racemase [Enterococcus faecium TC 6]
gi|313588539|gb|EFR67384.1| glutamate racemase [Enterococcus faecium TX0133a01]
gi|313591853|gb|EFR70698.1| glutamate racemase [Enterococcus faecium TX0133B]
gi|313594707|gb|EFR73552.1| glutamate racemase [Enterococcus faecium TX0133A]
gi|313597602|gb|EFR76447.1| glutamate racemase [Enterococcus faecium TX0133C]
gi|313640855|gb|EFS05435.1| glutamate racemase [Enterococcus faecium TX0133a04]
gi|313643953|gb|EFS08533.1| glutamate racemase [Enterococcus faecium TX0082]
Length = 273
Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + + ++
Sbjct: 7 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T
Sbjct: 67 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + V + + ++ S VE + KK + K+
Sbjct: 125 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 181 IDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 240
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 241 FYTTGSAKLFEEIAEDWLGI 260
>gi|217964697|ref|YP_002350375.1| glutamate racemase [Listeria monocytogenes HCC23]
gi|254766118|sp|B8DHZ5|MURI_LISMH RecName: Full=Glutamate racemase
gi|217333967|gb|ACK39761.1| glutamate racemase [Listeria monocytogenes HCC23]
gi|307570742|emb|CAR83921.1| racE [Listeria monocytogenes L99]
Length = 266
Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ + VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + ++ S VE + K KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
+ D ++L CTHYPL+ + V +++ + A LL N + + +H
Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDSTDEEIEHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 235 FFTTGSTQIFKDIAKDWL 252
>gi|257887546|ref|ZP_05667199.1| glutamate racemase [Enterococcus faecium 1,141,733]
gi|257896041|ref|ZP_05675694.1| glutamate racemase [Enterococcus faecium Com12]
gi|293378787|ref|ZP_06624944.1| glutamate racemase [Enterococcus faecium PC4.1]
gi|257823600|gb|EEV50532.1| glutamate racemase [Enterococcus faecium 1,141,733]
gi|257832606|gb|EEV59027.1| glutamate racemase [Enterococcus faecium Com12]
gi|292642580|gb|EFF60733.1| glutamate racemase [Enterococcus faecium PC4.1]
Length = 281
Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + + ++
Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T
Sbjct: 71 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + V + + ++ S VE + KK + K+
Sbjct: 129 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 185 IDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 244
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 245 FYTTGSAKLFQEIAEDWLGI 264
>gi|228476470|ref|ZP_04061160.1| glutamate racemase [Streptococcus salivarius SK126]
gi|228251891|gb|EEK10937.1| glutamate racemase [Streptococcus salivarius SK126]
Length = 271
Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 18/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAEQIRQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K + VIACNTA ++ +E++ + LG V P A +QSG
Sbjct: 53 YTWQLVKFLLTK-DVKMIVIACNTATAVVWEEIKGAL-DIPVLGVVLPGSSAAIKSSQSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I Q ++ +S A VE +I KK +
Sbjct: 111 HIGVIGTPMTIASNIYEQKIKHLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ESMAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268
+R +D + + Q G
Sbjct: 226 SREVEDKTEEYYTTASVLGFKEIAEQWLG 254
>gi|239629726|ref|ZP_04672757.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239528412|gb|EEQ67413.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 578
Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 106/261 (40%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L
Sbjct: 97 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 156
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T
Sbjct: 157 KKH-IKMLVIACNTATAAALPLIKANL-DIPVIGVIKPGSRAALKATQTGHIGIIATEGT 214
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + I +++ S VE I K+ + +
Sbjct: 215 VKSGAYVKALRAKAPKIRITSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHED 270
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D ++L CTHYP++ + + + V +D+ LL + + + H
Sbjct: 271 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 330
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
+ +G P + L +
Sbjct: 331 YTTGAPSMFDELGEAWLELTA 351
>gi|238892365|ref|YP_002917099.1| glutamate racemase [Klebsiella pneumoniae NTUH-K2044]
gi|238544681|dbj|BAH61032.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 283
Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 83/273 (30%), Positives = 145/273 (53%), Gaps = 10/273 (3%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + ++L+FDSG+GGL V ++R L+P H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQQRYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+E D +VL CTH+PL+ +++ P +D+ +IARR LL
Sbjct: 188 RPWLRMQEP--PDTVVLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALF--LSGKPDIAMRRLMQGFGLKS 271
++ A L+ + + + +++ +G +
Sbjct: 246 AKSSDENKAFCMALTAETEQLL-PVLRRYGFST 277
>gi|206577595|ref|YP_002241172.1| glutamate racemase [Klebsiella pneumoniae 342]
gi|288937809|ref|YP_003441868.1| glutamate racemase [Klebsiella variicola At-22]
gi|290513035|ref|ZP_06552398.1| glutamate racemase [Klebsiella sp. 1_1_55]
gi|226707588|sp|B5XZ09|MURI_KLEP3 RecName: Full=Glutamate racemase
gi|206566653|gb|ACI08429.1| glutamate racemase [Klebsiella pneumoniae 342]
gi|288892518|gb|ADC60836.1| glutamate racemase [Klebsiella variicola At-22]
gi|289774417|gb|EFD82422.1| glutamate racemase [Klebsiella sp. 1_1_55]
Length = 283
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 83/273 (30%), Positives = 144/273 (52%), Gaps = 10/273 (3%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + ++L+FDSG+GGL V ++R L+P H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQQRYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+E D +VL CTH+PL+ +++ P +D+ +IARR LL
Sbjct: 188 RPWLRMQEP--PDTVVLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALF--LSGKPDIAMRRLMQGFGLKS 271
++ A L+ + + + ++ +G +
Sbjct: 246 AKSSDENKAFCMALTAETEQLL-PVLHRYGFPT 277
>gi|251787784|ref|YP_003002505.1| glutamate racemase [Dickeya zeae Ech1591]
gi|247536405|gb|ACT05026.1| glutamate racemase [Dickeya zeae Ech1591]
Length = 290
Score = 309 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 143/261 (54%), Gaps = 4/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ + +
Sbjct: 22 ARPTVLVFDSGVGGLSVYDEVRKLLPDLHYIYAFDNEAFPYGEKPEQFIIERVLSIVDAV 81
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ L +IACNTA T+ LR F +G VPA+K AA T++G++ +L+T AT
Sbjct: 82 EKQHPLSLVIIACNTASTISLPALRERF-DFPVVGVVPAVKPAAKLTRNGVVGLLATRAT 140
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT LI + C I L+ S L E G + E+ ++K + K +
Sbjct: 141 VQRSYTHELISRFAHDCQILLLGSAELVEFAEAKLQGESVSEEVLRKILRPWL--KLAEP 198
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PL+ +++ P +D+ +IARR L+ ++ + + A
Sbjct: 199 PDTVVLGCTHFPLLAEELQRVLPDGTRLVDSGSAIARRTAWLIEHLDNPKCSTEKNLAYC 258
Query: 252 LSGKPDI-AMRRLMQGFGLKS 271
LS P + A+ +++ +G S
Sbjct: 259 LSITPKVAALWPVLRRYGFNS 279
>gi|260587549|ref|ZP_05853462.1| glutamate racemase [Blautia hansenii DSM 20583]
gi|331084204|ref|ZP_08333310.1| glutamate racemase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260541814|gb|EEX22383.1| glutamate racemase [Blautia hansenii DSM 20583]
gi|330402059|gb|EGG81632.1| glutamate racemase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 273
Score = 309 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 102/258 (39%), Gaps = 10/258 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ K I +FDSG+GGL V +++ +P +Y D PYG+ + + +
Sbjct: 1 MKYKKTAPIGVFDSGVGGLTVAREIMRNLPHEKIVYFGDTARVPYGSKSKETILRYSRQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
L + V+ACNTA L + + + +G V P K AA T++ I ++
Sbjct: 61 V-RFLQTQEVKAIVVACNTASALALETISEEI-DIPIIGVVKPGAKVAAQTTRNKKIGLI 118
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT++ I + + + + VEE + + K+ +
Sbjct: 119 GTRATVKSDLYRKTIQAENPEIEVIGQPCPLFVPLVEEGWLKDSVTIEVAKRYLAPLL-- 176
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TR 243
K D ++L CTHYPL+ + L V ++ + A+ + LL T
Sbjct: 177 --EKDIDTLILGCTHYPLLRSTLKTLVGDGVTLVNPAYETAKELQRLLKEQGMENEIHTD 234
Query: 244 VFDDHALFLSGKPDIAMR 261
+ F+S + +
Sbjct: 235 EEFPYRFFVSDEEECFQE 252
>gi|227551339|ref|ZP_03981388.1| glutamate racemase [Enterococcus faecium TX1330]
gi|227179550|gb|EEI60522.1| glutamate racemase [Enterococcus faecium TX1330]
Length = 277
Score = 309 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + + ++
Sbjct: 7 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T
Sbjct: 67 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + V + + ++ S VE + KK + K+
Sbjct: 125 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 181 IDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 240
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 241 FYTTGSAKLFQEIAEDWLGI 260
>gi|319946457|ref|ZP_08020694.1| glutamate racemase [Streptococcus australis ATCC 700641]
gi|319747425|gb|EFV99681.1| glutamate racemase [Streptococcus australis ATCC 700641]
Length = 264
Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 18/254 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG ++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVVYIGDSARAPYGPRPADQIRD 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ +L K + V+ACNTA ++ +E++ + LG + P A T+S
Sbjct: 53 YTWEMVRFLLTK-NVKMIVLACNTATAVVWEEVKEAL-DIPVLGVILPGASAAIKATKSK 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I S + + ++ VE + + + + ++
Sbjct: 111 RIGVIGTPMTVASDIYRKKIQSLSPEMAVESLACPKFVPLVESNELQSSVTKKVVYETLK 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 171 PL-----AGKVDTLVLGCTHYPLLRPIIQNVMGPEVQLIDSGAECVRDISVLLNYFEINR 225
Query: 242 TRVFDD--HALFLS 253
+R +D H + +
Sbjct: 226 SRQLEDCHHQFYTT 239
>gi|313624059|gb|EFR94143.1| glutamate racemase [Listeria innocua FSL J1-023]
Length = 266
Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAQFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ + VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + ++ S VE + K KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
+ D ++L CTHYPL+ + V +++ + A LL N + +H
Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 235 FFTTGSTQIFKDIAKDWL 252
>gi|16800269|ref|NP_470537.1| glutamate racemase [Listeria innocua Clip11262]
gi|20177980|sp|Q92CH2|MURI_LISIN RecName: Full=Glutamate racemase
gi|16413659|emb|CAC96431.1| racE [Listeria innocua Clip11262]
gi|313619282|gb|EFR91023.1| glutamate racemase [Listeria innocua FSL S4-378]
Length = 266
Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAQFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ + VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + ++ S VE + K KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
+ D ++L CTHYPL+ + V +++ + A LL N + +H
Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDDEIEHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 235 FFTTGSTQIFKDIAKDWL 252
>gi|308068443|ref|YP_003870048.1| glutamate racemase [Paenibacillus polymyxa E681]
gi|305857722|gb|ADM69510.1| Glutamate racemase [Paenibacillus polymyxa E681]
Length = 271
Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I I DSG+GGL V++++ +P IY D PYG +KK + ++
Sbjct: 4 QQAIAILDSGVGGLTVVKEVMRQLPREKIIYFGDTARTPYGPRPSEEVKKFTEQMVDFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ P + +IACNTA D + S+ +G + P + A + T +G + ++ T T
Sbjct: 64 -QFDPKVIIIACNTATAAALDYISQKV-SIPVIGVIHPGARAAISATATGHVGVIGTVGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + + + + L VE+ K + +E +
Sbjct: 122 IRSGAYTAALKQLSPYVDVVSHACPALVPLVEQGLFRSKTTS----QVVEETLRPIQTYP 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHAL 250
D ++L CTHYP + +++ V + ++D AR +L + H L
Sbjct: 178 IDCLILGCTHYPFLKETIQEVMGPAVKLISSADETARETSTILYNKGKLEAGDETPVHQL 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
F SG P++ R Q G
Sbjct: 238 FCSGDPELFQRIAAQWLG 255
>gi|315282014|ref|ZP_07870520.1| glutamate racemase [Listeria marthii FSL S4-120]
gi|313614341|gb|EFR87979.1| glutamate racemase [Listeria marthii FSL S4-120]
Length = 266
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 103/258 (39%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + + + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVARFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ + VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + ++ S VE + K KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
D ++L CTHYPL+ + V +++ + A LL N + +H
Sbjct: 175 NIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 235 FFTTGSTQIFKDIAKDWL 252
>gi|116872608|ref|YP_849389.1| glutamate racemase [Listeria welshimeri serovar 6b str. SLCC5334]
gi|123466205|sp|A0AHX8|MURI_LISW6 RecName: Full=Glutamate racemase
gi|116741486|emb|CAK20610.1| glutamate racemase [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 266
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ + VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATKNNKIGVLGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + ++ S VE + K KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
+ D ++L CTHYPL+ + V +++ + A LL N + +H
Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDGVSVINSGEETASEVSALLDYHNLLDATDEEIEHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 235 FFTTGSTQIFKDIAKDWL 252
>gi|312862544|ref|ZP_07722786.1| glutamate racemase [Streptococcus vestibularis F0396]
gi|322517484|ref|ZP_08070357.1| glutamate racemase [Streptococcus vestibularis ATCC 49124]
gi|311101949|gb|EFQ60150.1| glutamate racemase [Streptococcus vestibularis F0396]
gi|322123966|gb|EFX95525.1| glutamate racemase [Streptococcus vestibularis ATCC 49124]
Length = 271
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 68/269 (25%), Positives = 111/269 (41%), Gaps = 18/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K + VIACNTA ++ +E++ + LG V P A +QSG
Sbjct: 53 YTWQLVKFLLTK-DVKMIVIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSQSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I Q ++ +S A VE +I KK +
Sbjct: 111 QIGVIGTPMTIASNIYEQKIKRLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
K D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ESMAPLVDK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268
+R +D + + Q G
Sbjct: 226 SREVEDKTEEYYTTASVLGFKEIAEQWLG 254
>gi|16803277|ref|NP_464762.1| glutamate racemase [Listeria monocytogenes EGD-e]
gi|46907456|ref|YP_013845.1| glutamate racemase [Listeria monocytogenes serotype 4b str. F2365]
gi|47097378|ref|ZP_00234930.1| glutamate racemase [Listeria monocytogenes str. 1/2a F6854]
gi|224499092|ref|ZP_03667441.1| glutamate racemase [Listeria monocytogenes Finland 1988]
gi|224503808|ref|ZP_03672115.1| glutamate racemase [Listeria monocytogenes FSL R2-561]
gi|226223837|ref|YP_002757944.1| glutamate racemase [Listeria monocytogenes Clip81459]
gi|254823509|ref|ZP_05228510.1| racE [Listeria monocytogenes FSL J1-194]
gi|254828597|ref|ZP_05233284.1| glutamate racemase [Listeria monocytogenes FSL N3-165]
gi|254830009|ref|ZP_05234664.1| glutamate racemase [Listeria monocytogenes 10403S]
gi|254852894|ref|ZP_05242242.1| racE [Listeria monocytogenes FSL R2-503]
gi|254898602|ref|ZP_05258526.1| glutamate racemase [Listeria monocytogenes J0161]
gi|254932885|ref|ZP_05266244.1| racE [Listeria monocytogenes HPB2262]
gi|254936234|ref|ZP_05267931.1| racE [Listeria monocytogenes F6900]
gi|254993152|ref|ZP_05275342.1| glutamate racemase [Listeria monocytogenes FSL J2-064]
gi|255025221|ref|ZP_05297207.1| glutamate racemase [Listeria monocytogenes FSL J2-003]
gi|255522515|ref|ZP_05389752.1| glutamate racemase [Listeria monocytogenes FSL J1-175]
gi|284801557|ref|YP_003413422.1| hypothetical protein LM5578_1310 [Listeria monocytogenes 08-5578]
gi|284994699|ref|YP_003416467.1| hypothetical protein LM5923_1263 [Listeria monocytogenes 08-5923]
gi|290893281|ref|ZP_06556267.1| racE protein [Listeria monocytogenes FSL J2-071]
gi|300764386|ref|ZP_07074380.1| glutamate racemase [Listeria monocytogenes FSL N1-017]
gi|20177977|sp|Q8Y7N7|MURI_LISMO RecName: Full=Glutamate racemase
gi|67460886|sp|Q720J2|MURI_LISMF RecName: Full=Glutamate racemase
gi|259509916|sp|C1L2E2|MURI_LISMC RecName: Full=Glutamate racemase
gi|16410653|emb|CAC99315.1| racE [Listeria monocytogenes EGD-e]
gi|46880724|gb|AAT04022.1| glutamate racemase [Listeria monocytogenes serotype 4b str. F2365]
gi|47014250|gb|EAL05231.1| glutamate racemase [Listeria monocytogenes str. 1/2a F6854]
gi|225876299|emb|CAS05008.1| Putative glutamate racemase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258600995|gb|EEW14320.1| glutamate racemase [Listeria monocytogenes FSL N3-165]
gi|258606229|gb|EEW18837.1| racE [Listeria monocytogenes FSL R2-503]
gi|258608824|gb|EEW21432.1| racE [Listeria monocytogenes F6900]
gi|284057119|gb|ADB68060.1| hypothetical protein LM5578_1310 [Listeria monocytogenes 08-5578]
gi|284060166|gb|ADB71105.1| hypothetical protein LM5923_1263 [Listeria monocytogenes 08-5923]
gi|290557089|gb|EFD90617.1| racE protein [Listeria monocytogenes FSL J2-071]
gi|293584439|gb|EFF96471.1| racE [Listeria monocytogenes HPB2262]
gi|293592729|gb|EFG00490.1| racE [Listeria monocytogenes FSL J1-194]
gi|300515038|gb|EFK42091.1| glutamate racemase [Listeria monocytogenes FSL N1-017]
gi|313609160|gb|EFR84843.1| glutamate racemase [Listeria monocytogenes FSL F2-208]
gi|328466631|gb|EGF37766.1| glutamate racemase [Listeria monocytogenes 1816]
gi|328475255|gb|EGF46036.1| glutamate racemase [Listeria monocytogenes 220]
gi|332311623|gb|EGJ24718.1| Glutamate racemase [Listeria monocytogenes str. Scott A]
Length = 266
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ + VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + ++ S VE + K KK + + +
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKST 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
+ D ++L CTHYPL+ + V +++ + A LL N + +H
Sbjct: 175 KIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 235 FFTTGSTQIFKDIAKDWL 252
>gi|310641323|ref|YP_003946081.1| glutamate racemase [Paenibacillus polymyxa SC2]
gi|309246273|gb|ADO55840.1| Glutamate racemase [Paenibacillus polymyxa SC2]
Length = 269
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I I DSG+GGL V++++ +P IY D PYG +KK + +
Sbjct: 1 MQQAIAILDSGVGGLTVVKEVMRQLPREKIIYFGDTARTPYGPRPSEEVKKFTEQMVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ ++ P + +IACNTA + + S+ +G + P + A + T +G + ++ T
Sbjct: 61 I-QFNPKVIIIACNTATAAALEYISQKV-SIPVIGVIHPGARAAISATATGYVGVIGTVG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + + + + L VE+ K + +E +
Sbjct: 119 TIRSGAYTTALKQLSPYVDVVSHACPALVPLVEQGLFRSKTTS----QVVEESLRPIQTY 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHA 249
D ++L CTHYP + +++ V + ++D AR +L + H
Sbjct: 175 PIDCLILGCTHYPFLRETIQEVMGPAVKLISSADETARETSTILYNKGKLEAGDETPVHQ 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
LF SG P++ R Q G
Sbjct: 235 LFCSGDPELFQRIAAQWLG 253
>gi|257898669|ref|ZP_05678322.1| glutamate racemase [Enterococcus faecium Com15]
gi|257836581|gb|EEV61655.1| glutamate racemase [Enterococcus faecium Com15]
Length = 273
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + + ++
Sbjct: 7 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T
Sbjct: 67 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + V + + ++ S VE + KK + K+
Sbjct: 125 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 181 IDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 240
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 241 FYTTGSAKLFQEIAEDWLGI 260
>gi|293554039|ref|ZP_06674639.1| glutamate racemase [Enterococcus faecium E1039]
gi|291601821|gb|EFF32073.1| glutamate racemase [Enterococcus faecium E1039]
Length = 277
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + + ++
Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
D+ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T
Sbjct: 71 DQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + V + + ++ S VE + KK + K+
Sbjct: 129 VKSRAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 185 IDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQ 244
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 245 FYTTGSAKLFEEIAEDWLGI 264
>gi|222152578|ref|YP_002561753.1| glutamate racemase [Streptococcus uberis 0140J]
gi|254766128|sp|B9DTR9|MURI_STRU0 RecName: Full=Glutamate racemase
gi|222113389|emb|CAR41037.1| glutamate racemase [Streptococcus uberis 0140J]
Length = 264
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +YV D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHESIVYVGDSARAPYGPRPADQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + V ACNTA + +E+++ S+ LG + P A T SG
Sbjct: 53 FTWELVNFLLTK-NVKMIVFACNTATAVAWEEVKNAL-SIPVLGVILPGSSAAIKSTTSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T++ I Q + ++ VE + + + + +E
Sbjct: 111 KVGVIGTPMTIQSDIYRQKIQLLAPQIEVLSLACPKFVPIVESNETKSSVAKKIVYETLE 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 171 PLV-----GKVDTLVLGCTHYPLLRPIIQNVMGSEVTLIDSGAECIRDISVLLNYFQINA 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
+R D+ F + D
Sbjct: 226 SREEKKADNLFFTTAGTDTFKEIANAWL 253
>gi|315640905|ref|ZP_07896001.1| glutamate racemase [Enterococcus italicus DSM 15952]
gi|315483323|gb|EFU73823.1| glutamate racemase [Enterococcus italicus DSM 15952]
Length = 272
Score = 308 bits (791), Expect = 4e-82, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 103/260 (39%), Gaps = 9/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
I DSG+GGL V+++ +P + IY+ D PYG + +
Sbjct: 2 DKNQPIGFIDSGVGGLTVVKEALKQLPNENIIYLGDTARCPYGPRPAEQVIAFTWEMTRF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+L+K + VIACNTA + +E++ T S+ +G + P + A T + I ++ T
Sbjct: 62 LLNK-NIKMLVIACNTATAVALEEIKKTL-SIPVIGVILPGSRAAIKATHTNQIGVIGTE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ ++ + I ++ VE + + KK + E
Sbjct: 120 GTIKSASYERVLQEKSPKAKILSLACPKFVPIVESN----QFQTSVAKKIVAESLRYFEK 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D ++L CTHYP++ + + + V +D+ LL T + +
Sbjct: 176 QPVDTLILGCTHYPILRPLIQNVMGSKVKLIDSGAETVGEVSTLLDYFQMANTTLTTERS 235
Query: 249 -ALFLSGKPDIAMRRLMQGF 267
+ +G + + +
Sbjct: 236 MTFYTTGSTKMFDQIAKEWL 255
>gi|299822584|ref|ZP_07054470.1| glutamate racemase [Listeria grayi DSM 20601]
gi|299816113|gb|EFI83351.1| glutamate racemase [Listeria grayi DSM 20601]
Length = 270
Score = 308 bits (791), Expect = 4e-82, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 104/259 (40%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVKEVLKQLPHEQIYYLGDTARCPYGPRKPEEVLKFTREMSHFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ + VIACNTA ++R+ + +G + P + A +++ I++L T
Sbjct: 61 IDRG-IKMLVIACNTATAAALVQIRAEL-DIPVIGVIQPGSRAALKESRNNKIAVLGTIG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + Q + ++ S VE + K KK + + +
Sbjct: 119 TVKSEAYPKALKRLNHQVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKNT 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
D ++L CTHYPL+ + V +++ + A LL + H
Sbjct: 175 TIDTVILGCTHYPLLKPIIENFLGADVAVINSGEETASEVSALLDYHGLLDSGGDTIKHR 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G I G
Sbjct: 235 FFTTGSTSIFKNLAEDWLG 253
>gi|302390710|ref|YP_003826531.1| glutamate racemase [Thermosediminibacter oceani DSM 16646]
gi|302201338|gb|ADL08908.1| glutamate racemase [Thermosediminibacter oceani DSM 16646]
Length = 273
Score = 308 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 65/250 (26%), Positives = 101/250 (40%), Gaps = 6/250 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSGIGGL V +++ +P + +Y D PYG+ + R F + L
Sbjct: 5 ERPIGIFDSGIGGLTVAREIMNHLPGENLVYFGDTARVPYGSKSKETIT-RFAFEGVNFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNT DEL+ P P + A T +G++ ++ T T+
Sbjct: 64 MKQAVKMIVIACNTVSATCLDELQQAVPVPVVGVIEPGARAAVNATVNGVVGVIGTERTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
IH S I + + VEE + + + +
Sbjct: 124 NSGAYIKAIHRLNSSIKIFSRACPMFVPLVEEGW----LDNEAAVFAARTYLGPLKKEGI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALF 251
D +VLACTHYPL+ R++ V +D++ AR LL + +T + F
Sbjct: 180 DTLVLACTHYPLLKPTLRKVMGDQVFLVDSAMETAREVARLLREKSLARTGGGPATYRYF 239
Query: 252 LSGKPDIAMR 261
+S P
Sbjct: 240 VSDNPAKFKE 249
>gi|199598101|ref|ZP_03211524.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus HN001]
gi|258507777|ref|YP_003170528.1| glutamate racemase [Lactobacillus rhamnosus GG]
gi|199591027|gb|EDY99110.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus HN001]
gi|257147704|emb|CAR86677.1| Glutamate racemase [Lactobacillus rhamnosus GG]
gi|259649124|dbj|BAI41286.1| glutamate racemase [Lactobacillus rhamnosus GG]
Length = 484
Score = 308 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T
Sbjct: 63 TKH-IKMLVIACNTATAAALPLIKARLK-IPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + +++ S VE I K+ + +
Sbjct: 121 VKSGAYPKALRAKAPDIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHQD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTHYP++ + + + V +D+ LL + H
Sbjct: 177 IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVPTHTY 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ +G P + LK
Sbjct: 237 YTTGAPSMFDELGESWLELK 256
>gi|148546010|ref|YP_001266112.1| glutamate racemase [Pseudomonas putida F1]
gi|166231050|sp|A5VYG8|MURI_PSEP1 RecName: Full=Glutamate racemase
gi|148510068|gb|ABQ76928.1| glutamate racemase [Pseudomonas putida F1]
Length = 265
Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + DSG+GGL VL +++ L+P +YVAD PYG +++R +
Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPNETLLYVADCGHIPYGEKSPDYIRERCRHIAEFFH 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL
Sbjct: 65 EQGAKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ ++G
Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIETG----DLASPALRQMLQGYVQPLLAAGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + + P V +D ++AR+ R LL + +
Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPNDVAIIDTGAAVARQLRRLLGANDLLAKGPAGAARFWT 239
Query: 253 SGKPDIAMRRL 263
S P+ + L
Sbjct: 240 SADPEALRKIL 250
>gi|332522432|ref|ZP_08398684.1| glutamate racemase [Streptococcus porcinus str. Jelinkova 176]
gi|332313696|gb|EGJ26681.1| glutamate racemase [Streptococcus porcinus str. Jelinkova 176]
Length = 264
Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 106/268 (39%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P + +Y+ D PYG +K+
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPYENIVYIGDSARAPYGPRPAEQIKE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + ++ K + V ACNTA + +E++ + LG + P A T +G
Sbjct: 53 YTWELVNFLMTK-NVKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE +I+ KK +
Sbjct: 111 RVGVIGTPMTVISDIYRQKIQLLAPAVEVTSLACPKFVPIVESN----EIQSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 167 ETLAPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINS 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGF 267
R + H + + P+
Sbjct: 226 GRYQEKVRHYFYTTASPETFQEIASVWL 253
>gi|304398949|ref|ZP_07380818.1| glutamate racemase [Pantoea sp. aB]
gi|304353409|gb|EFM17787.1| glutamate racemase [Pantoea sp. aB]
Length = 283
Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 142/262 (54%), Gaps = 4/262 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ +
Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKSETFIVERVVAIVE 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T
Sbjct: 78 AITQRYPLSLVIIACNTASTVSLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+RR YT L+ + C+I ++ S L E G ++ DE+++ ++ +
Sbjct: 137 ATVRRPYTHELVAQFAGSCNIEMLGSAELVELAEAKLHGAEVALDEVRRIVQPWL--RMA 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +VL CTH+PL+ +Q+ P +D+ +IARR LL + A
Sbjct: 195 EPPDTVVLGCTHFPLLREELQQVLPEGTRLIDSGAAIARRTAWLLEHEAPEVNSSQQNVA 254
Query: 250 LFLSGKPD-IAMRRLMQGFGLK 270
+ + + + ++Q +G
Sbjct: 255 FCTALDGEAVQLSPVLQRYGFP 276
>gi|167461654|ref|ZP_02326743.1| glutamate racemase [Paenibacillus larvae subsp. larvae BRL-230010]
gi|322384236|ref|ZP_08057946.1| glutamate racemase-like protein [Paenibacillus larvae subsp. larvae
B-3650]
gi|321151128|gb|EFX44445.1| glutamate racemase-like protein [Paenibacillus larvae subsp. larvae
B-3650]
Length = 268
Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats.
Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 8/253 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I I DSG+GGL V++++ +P+ IY D PYG +K + +
Sbjct: 1 MQQAIAILDSGVGGLTVVKEVMRQLPQEQIIYFGDSARSPYGPRPADEVKLFTRQVVDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + P + VIACNTA + +E+R ++ +G + P + A ++G I ++ T
Sbjct: 61 IE-FHPKMIVIACNTATAVALEEIRQRV-AIPVVGVISPGARAAIKMARTGSIGVIGTDG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + + +H S +LA VE+ +E + +E + K
Sbjct: 119 TIRSGAYEETLKTISPTIQVHSQSCPLLAPMVEKGIFNG----EEALQVVESSLLPLLDK 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D ++L CTHYP + V ++ V +++++ AR +L N T F +H
Sbjct: 175 SMDCLILGCTHYPYLADVIGKVMGPEVCLINSAEETAREVSTILQHQNQLATGKFRPEHR 234
Query: 250 LFLSGKPDIAMRR 262
F SG P + +
Sbjct: 235 FFCSGDPVLFKKI 247
>gi|210614803|ref|ZP_03290332.1| hypothetical protein CLONEX_02546 [Clostridium nexile DSM 1787]
gi|210150572|gb|EEA81581.1| hypothetical protein CLONEX_02546 [Clostridium nexile DSM 1787]
Length = 275
Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 105/265 (39%), Gaps = 15/265 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M IDN K + +FDSG+GGL V +++ +P + +Y D PYG+ +
Sbjct: 1 MSIDN-----KNAAPVGVFDSGVGGLTVAREIMRQLPNENLVYFGDTARVPYGSKSRDNI 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + L VIACNTA L D +R + +G V P + A TQ
Sbjct: 56 IRYSRQIIH-FLKTKGVKAIVIACNTASALALDVVREE-SDIPIIGVVEPGARAALQITQ 113
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I ++ T AT++ +I + + + VEE K+ E+
Sbjct: 114 TKKIGVIGTEATVQSAMYGKIIKGLDPTVSVIGKACPLFVPLVEEGFAKHKVTEE----I 169
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
I+ + D ++L CTHYPL+ R + ++ + A + +L
Sbjct: 170 IDYYLASMKESDIDSLILGCTHYPLLRSRIRAYLGDKIQLVNPAYETAMDLKYILKESGM 229
Query: 240 HQTRVFDDHA---LFLSGKPDIAMR 261
+HA ++S D +
Sbjct: 230 ENAGKEGEHATYSFYVSDAADKFKQ 254
>gi|186682253|ref|YP_001865449.1| glutamate racemase [Nostoc punctiforme PCC 73102]
gi|186464705|gb|ACC80506.1| glutamate racemase [Nostoc punctiforme PCC 73102]
Length = 288
Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 108/269 (40%), Gaps = 9/269 (3%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+D++ + + I IFDSG+GGL VL+++ +P +Y D PYG +
Sbjct: 10 NLDDFSALEPQRAPIGIFDSGVGGLTVLRQIYRQLPNESIVYFGDTARLPYGIRSQAEIL 69
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
+ + + L + Q + ++ACNT+ L + +R F ++ LG + P K A +
Sbjct: 70 QFTREILT-WLQQQQVKMVIMACNTSSALALETVRQEF-NIPILGVILPGAKAAVQ--EG 125
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +++TPAT + + I + V +E+ +I + +
Sbjct: 126 KRIGVIATPATAKSNAYKHAILEIAPDVQVWQVGCPEFVPLIEQN----RIHDPYTAEVA 181
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D +V CTHYP + V R L P V +D + + L +
Sbjct: 182 RAYLEPLLEQEIDTLVHGCTHYPHLTPVLRSLLPSQVKLVDPAVHVVAACAQELDLLGLK 241
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGL 269
T +SG P + +Q G
Sbjct: 242 NTHPPLPTRFAVSGCPQQFSQSGVQWLGY 270
>gi|160881908|ref|YP_001560876.1| glutamate racemase [Clostridium phytofermentans ISDg]
gi|160430574|gb|ABX44137.1| glutamate racemase [Clostridium phytofermentans ISDg]
Length = 270
Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 8/249 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+++I +FDSGIGGL V +++ +P+ IY D PYG+ + + +L
Sbjct: 4 KSAIGVFDSGIGGLTVTKEIMNQLPKEQIIYFGDTARLPYGSKSKATITMYSRQIIRFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K VIACNTA + +R + +G + P K AA T++G I +++T T
Sbjct: 64 TK-DVKAIVIACNTASAHALETVRKEI-EIPIIGVINPGAKVAAETTRNGNIGVIATEGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + + + + + VEE I ++ + + I+ K
Sbjct: 122 IRSGIYNEFLGEIRPDLRVFGKACPLFVPLVEEGWIDDPITKEVVSRYIQELL----YKD 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250
D ++L CTHYPL+ V R++ ++ ++ + AR + +L +H
Sbjct: 178 IDTLILGCTHYPLLRKVIREVVGDGIELVNPAYETARTLKHVLEEQKLLSEETTTPEHTF 237
Query: 251 FLSGKPDIA 259
F+S +
Sbjct: 238 FVSDGAEKF 246
>gi|255282581|ref|ZP_05347136.1| glutamate racemase [Bryantella formatexigens DSM 14469]
gi|255266874|gb|EET60079.1| glutamate racemase [Bryantella formatexigens DSM 14469]
Length = 275
Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats.
Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 11/253 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ + + IFDSG+GGL V +++ +PE +Y D PYG+ + + +
Sbjct: 4 RERERPVGIFDSGVGGLTVTREVMRNIPEERIVYFGDTARVPYGSKSKETILRYSRQIVR 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
+L + V+ACNTA +E+R P + +G V P K A A T++ I ++ T
Sbjct: 64 FLLTQ-DVKAIVVACNTASAFALEEIRHELP-VPIIGVVRPGAKVACAATKNNRIGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + LI + + + VEE + E+ ++ + G +
Sbjct: 122 KGTIASGLYTELIRQIKPDAEVIGKACPLFVPLVEEGMMKDTVTEEVARRYLAG----LQ 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---- 244
+ D ++L CTHYPL+ + ++ V ++ + A R LL + T
Sbjct: 178 EQDIDTLILGCTHYPLLRSMIGKIMGEGVTLVNPAYETACSLRTLLIQEGLQNTEPLAEG 237
Query: 245 FDDHALFLSGKPD 257
+ H ++S P+
Sbjct: 238 ENPHRFYVSDAPE 250
>gi|293572584|ref|ZP_06683558.1| glutamate racemase [Enterococcus faecium E980]
gi|291607367|gb|EFF36715.1| glutamate racemase [Enterococcus faecium E980]
Length = 270
Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 104/260 (40%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + + ++
Sbjct: 4 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA + +E+++ S+ +G + P + A TQ+ + I+ T T
Sbjct: 64 EQG-IKMLVIACNTATAVALEEIKAAL-SIPVIGVILPGTRAAVKKTQNKQVGIIGTIGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + V + + ++ S VE + KK + K+
Sbjct: 122 VKSQAYEKALKEKVPELTVTSLACPKFVSVVESN----EYHSSVAKKIVAETLAPLTTKK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D ++L CTHYPL+ + + + V +D+ LL + +
Sbjct: 178 IDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFHLSNSPQNGRTLCQ 237
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 238 FYTTGSAKLFQEIAEDWLGI 257
>gi|229553813|ref|ZP_04442538.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus LMS2-1]
gi|229312836|gb|EEN78809.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus LMS2-1]
Length = 485
Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L
Sbjct: 4 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T
Sbjct: 64 TKH-IKMLVIACNTATAAALPLIKARLK-IPVIGVIKPGSRAALKATQTGHIGIIATEGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + +++ S VE I K+ + +
Sbjct: 122 VKSGAYPKALRAKAPNIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHQD 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTHYP++ + + + V +D+ LL + H
Sbjct: 178 IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVPTHTY 237
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ +G P + LK
Sbjct: 238 YTTGAPSMFDELGESWLELK 257
>gi|258538968|ref|YP_003173467.1| glutamate racemase [Lactobacillus rhamnosus Lc 705]
gi|257150644|emb|CAR89616.1| Glutamate racemase [Lactobacillus rhamnosus Lc 705]
Length = 484
Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P + IY+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T
Sbjct: 63 TKH-IKMLVIACNTATAAALPLIKARLK-IPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + +++ S VE I K+ + +
Sbjct: 121 VKSGAYPKALRAKAPNIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHQD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTHYP++ + + + V +D+ LL + H
Sbjct: 177 IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVPTHTY 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ +G P + LK
Sbjct: 237 YTTGAPSMFDELGESWLELK 256
>gi|253580902|ref|ZP_04858164.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847744|gb|EES75712.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 273
Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 106/263 (40%), Gaps = 17/263 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKID + I +FDSG+GGL V +++ +P +Y D PYG+ +
Sbjct: 1 MKID-------REAPIGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKETI 53
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + L + Q V+ACNTA D +R F + +G + P K AAA T+
Sbjct: 54 IRYSRQII-RFLQQQQVKAIVVACNTASAFALDAVRDEF-DIPIIGVIEPGAKVAAAQTR 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + I+ T T+ + + + + + + VEE + ++
Sbjct: 112 NKRVGIIGTVGTVGSGIHAEYLKHLDPEITVFGKACPLFVPLVEEGWLHDPVTDE----V 167
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
E + K+ D ++L CTHYPL+ R++ V ++ + A LL
Sbjct: 168 AARYLKELQDKQVDTLILGCTHYPLLRSTIRKIMGDGVCLVNPAYETALELGRLLEEKGL 227
Query: 240 HQTRVFDD---HALFLSGKPDIA 259
+ + ++S D
Sbjct: 228 AGEGTEKNEFPYRFYVSDLADEF 250
>gi|323136843|ref|ZP_08071924.1| glutamate racemase [Methylocystis sp. ATCC 49242]
gi|322398160|gb|EFY00681.1| glutamate racemase [Methylocystis sp. ATCC 49242]
Length = 267
Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats.
Identities = 112/266 (42%), Positives = 167/266 (62%), Gaps = 6/266 (2%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ IL+FDSG+GGL V ++ + P ++Y ADD GFPYG+W++ L R+M +
Sbjct: 1 MNRPPRILVFDSGLGGLTVFAEIVKIRPGADYVYCADDAGFPYGSWKEPELVDRVMKVME 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ ++ P + VIACNTA TL+ LR+ +P + F+G VPAIK AA +++S +IS+L+TP
Sbjct: 61 RLIAEHAPDMVVIACNTASTLVLPCLRARWPEIPFVGTVPAIKPAAEHSRSKMISVLATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ R YT NLI + + C + LV S LA E Y + ++EI EI CF E +G
Sbjct: 121 GTVARDYTQNLIAQFAADCRVALVGSTTLARLAENYMHHGSVCDEEIAAEIAPCFQESDG 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFD 246
+RTDV+VLACTHYPL++ F++L+PWPV+W+D + +IARRA LL + + R
Sbjct: 181 RRTDVVVLACTHYPLLLDAFQRLAPWPVEWIDPAPAIARRADQLLAGRFGRDESEPRAAP 240
Query: 247 DHALFLSG-KPDIAMRRLMQGFGLKS 271
A+F SG P +R + +GL +
Sbjct: 241 GRAVFTSGAAPAPQLRETLARYGLAA 266
>gi|167031792|ref|YP_001667023.1| glutamate racemase [Pseudomonas putida GB-1]
gi|189030364|sp|B0KNE7|MURI_PSEPG RecName: Full=Glutamate racemase
gi|166858280|gb|ABY96687.1| glutamate racemase [Pseudomonas putida GB-1]
Length = 265
Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + DSG+GGL VL +++ L+P +YVAD PYG +++R +
Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPNETLLYVADCGHVPYGEKSPDYIRQRCRHIAGFFH 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL
Sbjct: 65 EQGAKAM-VLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ + G
Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIETG----DLTSPVLRQMLWGYVQPLLAAGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + + P V +D ++AR+ + LL + D +
Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPADVAVIDTGAAVARQLQRLLGANDLLAEGPAGDARFWT 239
Query: 253 SGKPDIAMRRL 263
S P+I + L
Sbjct: 240 SADPEILRKIL 250
>gi|125974438|ref|YP_001038348.1| glutamate racemase [Clostridium thermocellum ATCC 27405]
gi|256005209|ref|ZP_05430177.1| glutamate racemase [Clostridium thermocellum DSM 2360]
gi|281418963|ref|ZP_06249981.1| glutamate racemase [Clostridium thermocellum JW20]
gi|125714663|gb|ABN53155.1| glutamate racemase [Clostridium thermocellum ATCC 27405]
gi|255990863|gb|EEU00977.1| glutamate racemase [Clostridium thermocellum DSM 2360]
gi|281407420|gb|EFB37680.1| glutamate racemase [Clostridium thermocellum JW20]
gi|316941574|gb|ADU75608.1| glutamate racemase [Clostridium thermocellum DSM 1313]
Length = 268
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 13/253 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSG+GGL VL++++ L+P +Y D PYG+ + K
Sbjct: 1 MDNRP--------IGVFDSGLGGLTVLKEIKNLLPRESIVYFGDSGRAPYGSKSKETVVK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L++ + VIACNTA D+++++F P A T +
Sbjct: 53 YTFQDIRFLLNQ-DIKMIVIACNTASACSLDQVKNSFDIPIVEVVGPGAATAVRETVNKK 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ ++ T AT+ I + I+ + + VEE I + E
Sbjct: 112 VGVIGTVATVSSGVYEKAILKLDPEIEIYQKACPLFVPLVEEGWWENDIA----LRIAEE 167
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ + K D +VL CTHYPL+ + ++ V + ++ +A+ + ++ + N ++
Sbjct: 168 YLLPLKEKNIDTLVLGCTHYPLLYNTISKVMGDGVKLVSSALEVAKVVKEMIEKSNLNRD 227
Query: 243 RVFDDHALFLSGK 255
+ + +
Sbjct: 228 EKLNPVYRYYTSD 240
>gi|226946178|ref|YP_002801251.1| glutamate racemase [Azotobacter vinelandii DJ]
gi|226721105|gb|ACO80276.1| glutamate racemase [Azotobacter vinelandii DJ]
Length = 263
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 6/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + +FDSG+GGL VL ++R +P YVAD PYG +++R + + +L
Sbjct: 4 EAPVGVFDSGVGGLSVLSEIRARLPGESLFYVADSGHVPYGEKSSEYIRERCRHIAAFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA ELR +P + +G PA+K AAA T+SG + +L+T TL
Sbjct: 64 ERGAKAL-VLACNTATAAAVAELRELYPELPVIGMEPAVKPAAAATRSGRVGVLATSGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + L R+E + ++ + E
Sbjct: 123 KSARFAALLDRFAGDVRVITQPCPGLVERIEAGDLDGPATRELLRGFVAPLLAE----GC 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + L P + +D ++AR+ LL + +
Sbjct: 179 DTLILGCTHYPFVRPLLGTLVPDSISLIDTGAAVARQLERLLQERDLLAAGPAAA-RFWS 237
Query: 253 SGKPDIAMRRLMQGFGLKS 271
SG P R L +G +
Sbjct: 238 SGDPLGLERVLPLLWGAPA 256
>gi|229588286|ref|YP_002870405.1| glutamate racemase [Pseudomonas fluorescens SBW25]
gi|229360152|emb|CAY47009.1| putative peptidoglycan biosynthesis protein [Pseudomonas
fluorescens SBW25]
Length = 264
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 5/243 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL +++ L+P +YVAD PYG + +R + +
Sbjct: 4 DAPIGVFDSGVGGLTVLDEIQQLLPHESLLYVADCGHIPYGEKSPAFILERSRRVAAFF- 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL
Sbjct: 63 REQGAKAFVIACNTATVAAVADLRLDFPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ ++
Sbjct: 123 QSAKFAALLDRFATDVKVVTQPCPGLVELIESG----DLNSPALRQLLQRYIEPLLSAGC 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + Q+ P + +D ++AR+ + LL + + +
Sbjct: 179 DTIILGCTHYPFLKPLLAQMLPPSIILIDTGAAVARQLKRLLGERDLLAVGSPEPAQFWT 238
Query: 253 SGK 255
SG
Sbjct: 239 SGD 241
>gi|271502433|ref|YP_003335459.1| glutamate racemase [Dickeya dadantii Ech586]
gi|270345988|gb|ACZ78753.1| glutamate racemase [Dickeya dadantii Ech586]
Length = 290
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 85/268 (31%), Positives = 144/268 (53%), Gaps = 11/268 (4%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N P ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R+
Sbjct: 22 NRP-------TVLVFDSGVGGLSVYDEVRKLLPDLHYIYAFDNEAFPYGEKPEQFIIERV 74
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + + ++ L +IACNTA T+ LR+ F +G VPA+K AA T++G++
Sbjct: 75 LSIVEAVEKQHPLSLVIIACNTASTISLPALRTRF-DFPVVGVVPAVKPAAKLTRNGVVG 133
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T AT++R+YT LI + C I L+ S L E G + ED ++K +
Sbjct: 134 LLATRATVQRSYTHELISRFAHDCQILLLGSAELVEFAEAKLQGESVSEDVLRKILRPWL 193
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
K + D +VL CTH+PL+ + + P +D+ +IARR L+ ++ +
Sbjct: 194 --KLPEPPDTVVLGCTHFPLLTEELQHVLPDGTRLVDSGSAIARRTAWLIEHLDNPKCST 251
Query: 245 FDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+ A LS P + A+ +++ +G S
Sbjct: 252 EKNLAYCLSITPKVAALWPVLRRYGFHS 279
>gi|227329569|ref|ZP_03833593.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 285
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 140/266 (52%), Gaps = 4/266 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + +IL+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++
Sbjct: 17 PSNLPSRPTILVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L
Sbjct: 77 IVNAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAESKLQGETISISELQKILRPWL-- 193
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ + D +VL CTH+PL+ + P +D+ +IA+R L+ ++
Sbjct: 194 RLPEPPDTVVLGCTHFPLLAEELKMALPDGTRLVDSGAAIAKRTAWLIANLDNPPLSTDK 253
Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 254 NLVYCLAITPKVATLWPILQRYGFDS 279
>gi|261819555|ref|YP_003257661.1| glutamate racemase [Pectobacterium wasabiae WPP163]
gi|261603568|gb|ACX86054.1| glutamate racemase [Pectobacterium wasabiae WPP163]
Length = 285
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 143/272 (52%), Gaps = 4/272 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+ ++ P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG +
Sbjct: 11 ISLEAIPSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + S + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++
Sbjct: 71 IERVVEIVSAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 130 GVVGLLATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQKIL 189
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ + P +D+ +IA+R L+ ++
Sbjct: 190 RPWL--RLPEPPDTVVLGCTHFPLLAEELKMALPEGTRLVDSGAAIAKRTAWLIANLDNP 247
Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 248 PLSTDKNLVYCLTITPKVATLWPILQRYGFDS 279
>gi|116494343|ref|YP_806077.1| bifunctional glutamate racemase/xanthosine/inosine pyrophosphatase
[Lactobacillus casei ATCC 334]
gi|116104493|gb|ABJ69635.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family [Lactobacillus casei ATCC 334]
Length = 484
Score = 306 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T
Sbjct: 63 KKH-IKMLVIACNTATAAALPLIKANL-DIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + + +++ S VE I K+ + +
Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHED 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D ++L CTHYP++ + + + V +D+ LL + + + H
Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
+ +G P + L +
Sbjct: 237 YTTGAPSMFDELGEAWLELTA 257
>gi|295397445|ref|ZP_06807532.1| glutamate racemase [Aerococcus viridans ATCC 11563]
gi|294974346|gb|EFG50086.1| glutamate racemase [Aerococcus viridans ATCC 11563]
Length = 287
Score = 306 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 10/263 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E + I DSG+GGL V+++ +P IY+ D+ PYG + +
Sbjct: 7 EVNMNRPIGFLDSGVGGLTVVKEAMRQLPNESIIYIGDNARCPYGPRSVEEIAAFTNQMV 66
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+L K L VIACNTA + DE++ S+ +G + P + A YT++G I +L
Sbjct: 67 DFLLTK-DIKLLVIACNTATAVALDEIKQRV-SIPVIGVIQPGARAANKYTKNGKIGVLG 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + + ++ VE + KK I
Sbjct: 125 TEGTIKSGMYLENLLQKNKDLNTTSLACPAFVPLVESQQYATPLA----KKVIAETLAPI 180
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ K D ++L CTHYPL+ ++ V +D+ LL + +
Sbjct: 181 KNKGLDTVILGCTHYPLLRDTIQKTLGHTVKLIDSGQETISDVSILLDYNDIAKLSNDPS 240
Query: 248 ---HALFLSGKPDIAMRRLMQGF 267
+ +G P++
Sbjct: 241 PRMTEFYTTGSPELFKEIADDWL 263
>gi|259047138|ref|ZP_05737539.1| glutamate racemase [Granulicatella adiacens ATCC 49175]
gi|259036188|gb|EEW37443.1| glutamate racemase [Granulicatella adiacens ATCC 49175]
Length = 482
Score = 306 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 103/260 (39%), Gaps = 10/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I DSG+GGL VL++ +P +++ D PYG +++ + + +
Sbjct: 1 MKRPIGFIDSGVGGLTVLKEALKQLPNESMVFLGDSARCPYGTRPKEEIRQYTLEMVQFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L K + VIACNTA ++ +EL+ T + +G + P A T + I +L T A
Sbjct: 61 LQK-NIKMLVIACNTATAVVLEELKQTL-EIPVVGVIQPGSLAAIKQTSNDRIGVLGTNA 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ +H + ++ VE + +K+ + EG
Sbjct: 119 TISSKVYPKTMHDKNKNIQVFDIACPNFVPLVENNQSDTPEAWEIVKETLN----PLEGT 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDD 247
D ++L CTHYPL+ +++ V +D+ LL T +T
Sbjct: 175 NVDTVILGCTHYPLLRKTIQKVVGNQVSLIDSGAETVSSVSALLDYCKLSETPETNPNPT 234
Query: 248 HALFLSGKPDIAMRRLMQGF 267
++ +G +
Sbjct: 235 LEIYTTGDATLFEEIAENWL 254
>gi|329116659|ref|ZP_08245376.1| glutamate racemase [Streptococcus parauberis NCFD 2020]
gi|326907064|gb|EGE53978.1| glutamate racemase [Streptococcus parauberis NCFD 2020]
Length = 264
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++R +P + +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELRRQLPHENIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + V ACNTA + +E++ S+ LG + P A T +
Sbjct: 53 FTWDLVNFLLTK-DVKMIVFACNTATAVAWEEVKEAL-SIPVLGVILPGSSAAIKSTTNR 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE +IK KK +
Sbjct: 111 KVGVIGTPMTVSSNIYQEKIQLLAPMLSVISLACPKFVPIVESN----EIKSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 DTLSPLVGK-VDTLVLGCTHYPLLRPIIQNVMGPGVKLIDSGAECVRDISVLLNYFQINA 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +H + + +
Sbjct: 226 NPKEIEKNHRFYTTAGVESFQEIATDWL 253
>gi|227534493|ref|ZP_03964542.1| glutamate racemase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227187892|gb|EEI67959.1| glutamate racemase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 484
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T
Sbjct: 63 KKH-IKMLVIACNTATAAALPLIKANL-DIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + + +++ S VE I K+ + +
Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHED 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D ++L CTHYP++ + + + V +D+ LL + + + H
Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
+ +G P + L +
Sbjct: 237 YTTGAPSMFDELGEAWLELTA 257
>gi|55822242|ref|YP_140683.1| glutamate racemase [Streptococcus thermophilus CNRZ1066]
gi|116627188|ref|YP_819807.1| glutamate racemase [Streptococcus thermophilus LMD-9]
gi|81559855|sp|Q5M1I5|MURI_STRT1 RecName: Full=Glutamate racemase
gi|122268209|sp|Q03MG1|MURI_STRTD RecName: Full=Glutamate racemase
gi|55738227|gb|AAV61868.1| glutamate racemase [Streptococcus thermophilus CNRZ1066]
gi|116100465|gb|ABJ65611.1| glutamate racemase [Streptococcus thermophilus LMD-9]
Length = 271
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 18/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K + VIACNTA ++ +E++ + + LG V P A ++SG
Sbjct: 53 YTWQLVKFLLTK-DVKMIVIACNTATAVVWEEIKESL-DIPVLGVVLPGSSAAIKSSRSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I Q ++ +S A VE +I KK +
Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ESMAPLVD-RVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268
+R D + + Q G
Sbjct: 226 SREVKDKTEEYYTTASVLGFKEIAEQWLG 254
>gi|154503523|ref|ZP_02040583.1| hypothetical protein RUMGNA_01347 [Ruminococcus gnavus ATCC 29149]
gi|153795623|gb|EDN78043.1| hypothetical protein RUMGNA_01347 [Ruminococcus gnavus ATCC 29149]
Length = 276
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 14/263 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ++ +K + I +FDSG+GGL V++++ +P + +Y D PYG+ +
Sbjct: 1 MSME----CEKKKAPIGVFDSGVGGLTVVREITRQLPHENIVYFGDTARVPYGSKSKSNI 56
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + L Q VIACNTA L D +R F + +G + P + A T
Sbjct: 57 IRFSEQII-RFLKTKQVKAIVIACNTASALALDAVRDEF-DIPIIGVIVPGARAAVEATA 114
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+G I ++ T AT++ + +IH H+ + + VEE + E+
Sbjct: 115 NGEIGVVGTDATVKSGTYTKVIHQMDPNIHVREKACPLFVPLVEEGFKEHVVTEE----V 170
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PR 236
IE + D ++L CTHYPL+ R + ++ + A + LL
Sbjct: 171 IEYYLESLKHTEIDAMILGCTHYPLLRSKIRSYMGERIQIVNPAYETAMDLKRLLQSEDM 230
Query: 237 INTHQTRVFDDHALFLSGKPDIA 259
N + + ++S +
Sbjct: 231 ENDGEEGTSSKYEFYVSDAAEKF 253
>gi|191637675|ref|YP_001986841.1| Glutamate racemase [Lactobacillus casei BL23]
gi|190711977|emb|CAQ65983.1| Glutamate racemase [Lactobacillus casei BL23]
gi|327381734|gb|AEA53210.1| Ribonuclease PH/Ham1 protein [Lactobacillus casei LC2W]
gi|327384898|gb|AEA56372.1| Ribonuclease PH/Ham1 protein [Lactobacillus casei BD-II]
Length = 484
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T
Sbjct: 63 KKH-IKMLVIACNTATAAALPLIKANL-DIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + + +++ S VE I K+ + +
Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHED 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D ++L CTHYP++ + + + V +D+ LL + + + H
Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
+ +G P + L +
Sbjct: 237 YTTGAPSMFDELGEAWLELTA 257
>gi|301065854|ref|YP_003787877.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family [Lactobacillus casei str. Zhang]
gi|300438261|gb|ADK18027.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family [Lactobacillus casei str. Zhang]
Length = 484
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +L
Sbjct: 3 KQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K+ + VIACNTA +++ + +G + P + A TQ+G I I++T T
Sbjct: 63 KKH-IKMLVIACNTATAAALPLIKANL-DIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + + +++ S VE I K+ + +
Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIA----KRVVADTLQPLLHED 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D ++L CTHYP++ + + + V +D+ LL + + + H
Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
+ +G P + L +
Sbjct: 237 YTTGAPSMFDELGEAWLELTA 257
>gi|146296395|ref|YP_001180166.1| glutamate racemase [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409971|gb|ABP66975.1| glutamate racemase [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 267
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 14/253 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I IFDSG+GGL V +++ LMP +Y D PYG+ + K
Sbjct: 1 MDTRP--------IGIFDSGLGGLTVFKEIVNLMPNESIVYFGDTARIPYGSKSKETVTK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
M +L K + V+ACNTA + L+ F P + AA T++
Sbjct: 53 FAMQNTRFLLSK-NIKIVVVACNTASAYAYEFLKGQFDIPIIAVIEPGARAAALATKNKK 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ ++ T T+ I + + + VEE ++ K+ +E
Sbjct: 112 VGVIGTEGTIASGSFEKKILEFDPDIKVFSKPCPLFVPLVEEGWIDKEVTYLVAKEYLE- 170
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
E + K D +VL CTHYP + +V +++ P V ++ + A++ +L + N T
Sbjct: 171 ---EFKEKGIDTLVLGCTHYPFLQNVIKKILPE-VTLINPALETAKQTYEVLKQNNMLNT 226
Query: 243 RVFDDHALFLSGK 255
+ F +
Sbjct: 227 SDEEPTYYFYASD 239
>gi|195978747|ref|YP_002123991.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975452|gb|ACG62978.1| glutamate racemase MurI [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 292
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 101/268 (37%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+ ++ +P IY+ D PYG +++
Sbjct: 29 MDNRP--------IGFLDSGVGGLTVVSELMRQLPHEKIIYIGDSARAPYGPRPAEQIRE 80
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K+ + V ACNTA + +E++ + LG + P A T G
Sbjct: 81 YTWELVRFLLTKH-VKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGASAAIKATSGG 138
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ T T+ I + ++ VE +I KK +
Sbjct: 139 KVGVIGTSMTISSGIYQEKIQLLAPTVQVTSLACPRFVPIVESN----EISSSVAKKIVY 194
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 195 ETLAPLVGK-IDTLVLGCTHYPLLRTIIQNVLGPQVKLIDSGAECVRDISVLLNYFEING 253
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
+R + H + + D
Sbjct: 254 SRDDEHRRHHFYTTAGSDSFQAIASAWL 281
>gi|167747288|ref|ZP_02419415.1| hypothetical protein ANACAC_02002 [Anaerostipes caccae DSM 14662]
gi|167653266|gb|EDR97395.1| hypothetical protein ANACAC_02002 [Anaerostipes caccae DSM 14662]
Length = 272
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 6/249 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V +++ +P+ IY D PYG + + + + +L
Sbjct: 7 NAPIGVFDSGVGGLTVAREIMRQLPDESLIYFGDTARVPYGTKSKDTVIRYSRQIVNFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA L +L+ + P AA T++ I I+ T AT+
Sbjct: 67 SK-NVKAIVIACNTASALAMHKLQQEYIVPMIGMVRPGAIAAARATKNHHIGIIGTNATV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + VEE +I ED + + + E + +
Sbjct: 126 KSGQYGKYLRELNPDVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYLR----EFDQYQI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
D ++L CTHYPL+ + + V ++ + A+ R LL ++ ++ +
Sbjct: 182 DSLILGCTHYPLLQNPIKNFVGDNVTLINPAYETAKSLRELLKEREMEAESGHTAEYHYY 241
Query: 252 LSGKPDIAM 260
+S D +
Sbjct: 242 VSDMEDQFL 250
>gi|157373001|ref|YP_001480990.1| glutamate racemase [Serratia proteamaculans 568]
gi|167017321|sp|A8GL72|MURI_SERP5 RecName: Full=Glutamate racemase
gi|157324765|gb|ABV43862.1| glutamate racemase [Serratia proteamaculans 568]
Length = 287
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 89/262 (33%), Positives = 144/262 (54%), Gaps = 4/262 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + ++L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S
Sbjct: 23 KTRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIVSA 82
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ ++ + +IACNTA T+ LR F + +G VPAIK AA T +G++ +L+T
Sbjct: 83 VQQRHPLAIVIIACNTASTVSLPALRERF-TFPVVGVVPAIKPAARLTANGVVGLLATRG 141
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++RTYT LI + + C I L+ S L E G + +KK + +E
Sbjct: 142 TVQRTYTHELIARFATDCKIELLGSSELVELAEAKLHGEAVPLPTLKKILHPWLSMREP- 200
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+PL+ Q+ P +D+ +IARR L+ + D+ A
Sbjct: 201 -PDTVVLGCTHFPLLAEELMQVLPEGTRLIDSGAAIARRTAWLISTQENLVSTQEDNLAY 259
Query: 251 FLSGKPDI-AMRRLMQGFGLKS 271
++ D A+ ++QG+G KS
Sbjct: 260 CMALNEDTDALLPVLQGYGFKS 281
>gi|50123157|ref|YP_052324.1| glutamate racemase [Pectobacterium atrosepticum SCRI1043]
gi|81643623|sp|Q6CZB6|MURI_ERWCT RecName: Full=Glutamate racemase
gi|49613683|emb|CAG77134.1| glutamate racemase [Pectobacterium atrosepticum SCRI1043]
Length = 285
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 84/272 (30%), Positives = 143/272 (52%), Gaps = 4/272 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+ ++ P + +IL+FDSG+GGL V ++R L+P+ H+IY D+ FPYG +
Sbjct: 11 ISLEAIPSNLPSRPTILVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + S + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++
Sbjct: 71 IERVVEIVSAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 130 GVVGLLATRATVQRPYTHELITRFATDCQILSLGSSELVELAEAKLQGEAISISELQKIL 189
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ + + P +D+ +IA+R L+ ++
Sbjct: 190 RPWL--RLTEPPDTVVLGCTHFPLLAEELKMVLPEGTRLVDSGAAIAKRTAWLIANLDNP 247
Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L P +A + ++Q +G S
Sbjct: 248 PLSTDRNLVYCLKITPKVATLWPILQRYGFNS 279
>gi|312277667|gb|ADQ62324.1| Glutamate racemase [Streptococcus thermophilus ND03]
Length = 271
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 110/269 (40%), Gaps = 18/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K + VIACNTA ++ +E++ + LG V P A ++SG
Sbjct: 53 YTWQLVKFLLTK-DVKMIVIACNTATAVVWEEIKEAL-DIPVLGVVLPGSSAAIKSSRSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I Q ++ +S A VE +I KK +
Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ESMAPLVD-RVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268
+R D + + Q G
Sbjct: 226 SREVKDKTEEYYTTASVLGFKEIAEQWLG 254
>gi|308188582|ref|YP_003932713.1| glutamate racemase [Pantoea vagans C9-1]
gi|308059092|gb|ADO11264.1| Glutamate racemase [Pantoea vagans C9-1]
Length = 283
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 141/262 (53%), Gaps = 4/262 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ +
Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKSETFIVERVVAIVE 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T
Sbjct: 78 AITQRYPLSLVIIACNTASTVSLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+RR YT L+ + C+I ++ S L E G ++ DE+++ ++ +
Sbjct: 137 ATVRRPYTHELVSQFAGSCNIEMLGSAELVELAEAKLHGAEVALDEVRRIVQPWL--RMA 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +VL CTH+PL+ +Q+ P +D+ +IARR LL + A
Sbjct: 195 EPPDTVVLGCTHFPLLREELQQVLPEGTRLIDSGAAIARRTVWLLEHEAPQIHSSQQNVA 254
Query: 250 LFLSGKPD-IAMRRLMQGFGLK 270
+ + + ++Q +G
Sbjct: 255 FCTELDGEAVQLSPILQRYGFP 276
>gi|330811716|ref|YP_004356178.1| glutamate racemase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379824|gb|AEA71174.1| Glutamate racemase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 263
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 5/244 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL VL ++R L+P +YVAD PYG +++R + +L
Sbjct: 3 EAPIGVLDSGVGGLSVLGEIRQLLPNESLLYVADCGHIPYGEKTPEYIRQRCSIIADFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL
Sbjct: 63 GQGAKAL-VVACNTATVAAVADLRRDFPHWPIVGMEPAVKPAAAATRSGIVGVLATTGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + + + ++
Sbjct: 122 QSAKFAALLDRFATDVRVITQPCPGLVELIETG----DLHSPALYQLLQHYVDPLLAAGC 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + ++ P + +D ++AR+ + LL + +
Sbjct: 178 DTLILGCTHYPFLKPLLARMIPEHISLIDTGAAVARQLQRLLAERELLAEGPAGETYFWT 237
Query: 253 SGKP 256
S P
Sbjct: 238 SADP 241
>gi|319408556|emb|CBI82209.1| Glutamate racemase [Bartonella schoenbuchensis R1]
Length = 270
Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats.
Identities = 130/259 (50%), Positives = 177/259 (68%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL V++++R L+ E+ FIYVADD GFPYG W + ALK+R++ +F+++L
Sbjct: 3 ERPLLFFDSGIGGLTVVEEVRALISEFQFIYVADDAGFPYGIWSEDALKQRILKIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P+L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SGLIS+L+TP T+
Sbjct: 63 KLYNPILCVIACNTASTLVITDLRRKFPNILFVGTVPAIKLAAKKTKSGLISVLATPGTI 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI S+ +QCH+ LV S LA E Y G I + E++ EI CF+EK GK T
Sbjct: 123 QRAYTHKLIDSFANQCHVQLVGSTKLAGFAENYLRGNPIDDKELRHEILPCFVEKNGKYT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTHQTRVFDDHALF 251
DVIVLACTHYP ++++F + + WPV W+D + +IARR R LL I + +D ALF
Sbjct: 183 DVIVLACTHYPFLINLFHKQALWPVSWIDPAKAIARRTRSLLLEEIQNKNIKKHEDCALF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S +A L+Q FG
Sbjct: 243 TSQTIGVATEHLLQKFGFS 261
>gi|319898917|ref|YP_004159010.1| Glutamate racemase [Bartonella clarridgeiae 73]
gi|319402881|emb|CBI76432.1| Glutamate racemase [Bartonella clarridgeiae 73]
Length = 273
Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats.
Identities = 130/262 (49%), Positives = 179/262 (68%), Gaps = 4/262 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL VL+K+R +PEY FIY+ADD FPYG WE+ L++R++ +F+ +L
Sbjct: 3 EKPLLFFDSGIGGLTVLRKVRLFVPEYQFIYIADDAAFPYGVWEEEILRRRILKIFAYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y PVL VIACNTA TLI ++LR FP++ F+G VPAIK AA T+SG+IS+L+TP T+
Sbjct: 63 KLYNPVLCVIACNTASTLIIEDLRQEFPNICFVGTVPAIKLAAEQTKSGIISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI+S+ QCH+ LV S LA E Y G I E+E++ EI CFIEK GK T
Sbjct: 123 KRAYTHELINSFAGQCHVQLVGSEKLAGFAENYLRGYPINEEELRHEILPCFIEKNGKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRVFDDH 248
D++VLACTHYP ++++FR+ + WPVDW+D + ++A+R R LLP ++ + D
Sbjct: 183 DIVVLACTHYPFLINLFREQALWPVDWIDPAKAVAKRIRSLLPILPIKMQNKNMKKHKDF 242
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
ALF S + L+Q F L
Sbjct: 243 ALFTSQNISSSTEYLLQKFQLN 264
>gi|56751751|ref|YP_172452.1| glutamate racemase [Synechococcus elongatus PCC 6301]
gi|81301170|ref|YP_401378.1| glutamate racemase [Synechococcus elongatus PCC 7942]
gi|56686710|dbj|BAD79932.1| glutamate racemase [Synechococcus elongatus PCC 6301]
gi|81170051|gb|ABB58391.1| glutamate racemase [Synechococcus elongatus PCC 7942]
Length = 289
Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 9/259 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL++++ +P F+Y D PYG +++ + + D +
Sbjct: 14 APIGVFDSGVGGLTVLRELQRQLPHESFLYFGDTARLPYGTRSPAEIRQFVREIL-DWMQ 72
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
L V+ACNT+ L + LR + +M +G + PA + A + I +++T AT
Sbjct: 73 AEGCKLVVMACNTSSALALEALRGDY-TMPLIGLIQPAARVAVQ--RGQRIGVIATAATA 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + VE+ +I + + + +
Sbjct: 130 QSRAYRQALREANPNVQVWEIGCPEFVPLVEQQ----RIHDPQTLQVAAQYLAPLIEAQV 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++ CTHYP + V +QL P LD ++++ R + L + T +
Sbjct: 186 DTLIYGCTHYPHLAPVIQQLLPSSTHLLDPAEAVTRSVQMELEVLGLSHTSKASTVRFCV 245
Query: 253 SGKPDIAMRRLMQGFGLKS 271
S P + + G ++
Sbjct: 246 SHDPQHFSLAIERWLGFQA 264
>gi|260584033|ref|ZP_05851781.1| glutamate racemase [Granulicatella elegans ATCC 700633]
gi|260158659|gb|EEW93727.1| glutamate racemase [Granulicatella elegans ATCC 700633]
Length = 480
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 104/263 (39%), Gaps = 10/263 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ +I DSG+GGL VL++ +P I++ D PYGN ++K +
Sbjct: 1 MNNMSKAIGFIDSGVGGLTVLKEALKQLPHESMIFLGDSARCPYGNRTVEEIRKFTKEMV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+L K + VIACNTA +I +EL+ T + +G + P A T+S I++L
Sbjct: 61 QFLLKK-DVKMIVIACNTATAVILEELQETL-DIPVVGVIQPGSLAAIKQTKSQKIAVLG 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ I Q + + VE I KK +
Sbjct: 119 THATIQSDVYRKTIQKKNHQLMVTSLECPKFVPLVESNQTDSPIA----KKVVAQTLQPL 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRV 244
GK D ++L CTHYPL+ + + V +D+ LL ++T
Sbjct: 175 MGKEFDTLILGCTHYPLLKQRIQAVVGPQVTLIDSGAETVSTVSALLDFNYLAENYETNP 234
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
++ +G P +
Sbjct: 235 SPTLEIYTTGSPILFKEIAENWL 257
>gi|322411173|gb|EFY02081.1| glutamate racemase [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
Length = 264
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K + V ACNTA + +E++ + LG + P A T G
Sbjct: 53 YTWDLVRFLLTK-NVKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE +I+ KK +
Sbjct: 111 QVGVIGTPMTIASDIYRQKIQLLAPTVEVTSLACPKFVPIVESN----EIRSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 167 ESLTPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEING 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
+R + H + + P+I
Sbjct: 226 SRCQEKVKHHFYTTASPEIFQEIASVWL 253
>gi|262041735|ref|ZP_06014926.1| glutamate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259040922|gb|EEW42002.1| glutamate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 260
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 139/257 (54%), Gaps = 6/257 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRYS 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Y
Sbjct: 62 LALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + +E D +V
Sbjct: 121 TRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSG 254
L CTH+PL+ +++ P +D+ +IARR LL ++ A L+
Sbjct: 179 LGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPDAKSSDENKAFCMALTA 238
Query: 255 KPDIAMRRLMQGFGLKS 271
+ + + +++ +G +
Sbjct: 239 ETEQLL-PVLRRYGFST 254
>gi|152972756|ref|YP_001337902.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|330001329|ref|ZP_08303946.1| hypothetical protein HMPREF9538_01616 [Klebsiella sp. MS 92-3]
gi|150957605|gb|ABR79635.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|328537720|gb|EGF63925.1| hypothetical protein HMPREF9538_01616 [Klebsiella sp. MS 92-3]
Length = 260
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 139/257 (54%), Gaps = 6/257 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Y
Sbjct: 62 LALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + +E D +V
Sbjct: 121 TRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSG 254
L CTH+PL+ +++ P +D+ +IARR LL ++ A L+
Sbjct: 179 LGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPDAKSSDENKAFCMALTA 238
Query: 255 KPDIAMRRLMQGFGLKS 271
+ + + +++ +G +
Sbjct: 239 ETEQLL-PVLRRYGFST 254
>gi|239636354|ref|ZP_04677356.1| glutamate racemase [Staphylococcus warneri L37603]
gi|239597709|gb|EEQ80204.1| glutamate racemase [Staphylococcus warneri L37603]
Length = 265
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 101/262 (38%), Gaps = 7/262 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNRPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRSGEEVKQFTTEIAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L++ P + +G + P + A T++ + IL T
Sbjct: 61 VE-FDIKMLVIACNTATAVALEHLQNILP-IPVIGVIEPGARTAIMTTKNQNVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I ++ ++ VE+ + I +
Sbjct: 119 TIKSEAYRKHIKRINPNVEVYGIACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 176 EADTVILGCTHYPLLYQPINDYFGGKKTVISSGLETAREVSALLTFSNEHASYTQHPPHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
F +G + + G+ +
Sbjct: 236 FFATGDTTHIENIIKEWLGMDT 257
>gi|313884172|ref|ZP_07817938.1| glutamate racemase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620619|gb|EFR32042.1| glutamate racemase [Eremococcus coleocola ACS-139-V-Col8]
Length = 280
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 12/260 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I DSG GGL VL++ +P IY+ D PYG +++ + + + + +K
Sbjct: 5 PIGFIDSGFGGLTVLKQSLKQLPNESSIYLGDSARAPYGVRSVDEIRRFIWQMTNFLREK 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-KQAAAYTQSGLISILSTPATLR 133
+ VIACNT DE+R++ ++ +G + A + A T++ + I+ TPAT+
Sbjct: 65 G-IKMLVIACNTGAAAALDEIRASL-AIPVVGVIHAGSRAAILTTENNKVGIIGTPATIN 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +IH +Q + + VEE ++ + E + + D
Sbjct: 123 SDSYARIIHEKNAQLQVFSKACPDFVPIVEEN----QMVQPETMNTVANYLAPLKNAGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-----RVFDDH 248
+VL CTHYP + ++ V+ +D+ LL N ++ ++ H
Sbjct: 179 TLVLGCTHYPHLRPQIQEFMGPEVELIDSGVETINEVSALLDYFNLSRSAEDAQKMPPTH 238
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ +G R G
Sbjct: 239 TYYTTGSGAKFARFAQMWLG 258
>gi|167765980|ref|ZP_02438033.1| hypothetical protein CLOSS21_00471 [Clostridium sp. SS2/1]
gi|317497209|ref|ZP_07955533.1| Asp/Glu/Hydantoin racemase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167712337|gb|EDS22916.1| hypothetical protein CLOSS21_00471 [Clostridium sp. SS2/1]
gi|291558774|emb|CBL37574.1| glutamate racemase [butyrate-producing bacterium SSC/2]
gi|316895454|gb|EFV17612.1| Asp/Glu/Hydantoin racemase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 267
Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 8/251 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FDSG+GGL V +++ +PE IY D PYG + + + + +
Sbjct: 1 MNAPIGVFDSGVGGLTVAREIMRQLPEESMIYFGDTARVPYGTKSKDTIVRYSRQIVNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L K VIACNTA L +L+ + ++ +G V P A T++ I I+ T A
Sbjct: 61 LSKG-VKAVVIACNTASALALADLQELY-NVPIIGMVQPGAIAAMNATKNKNIGIIGTNA 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + + VEE +I ED + + + E +
Sbjct: 119 TIKSGQYGQYLRKLDPSVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYLR----EFKQY 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
D ++L CTHYPL+++ ++ V ++ + +A+ + +L + + + +
Sbjct: 175 DIDSLILGCTHYPLLINPIQRFVGDKVTLVNPAYEVAKTLKQMLAQRDMAASEDHTAKYE 234
Query: 250 LFLSGKPDIAM 260
++S D +
Sbjct: 235 YYVSDMADQFL 245
>gi|319745525|gb|EFV97827.1| glutamate racemase [Streptococcus agalactiae ATCC 13813]
Length = 290
Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 109/270 (40%), Gaps = 18/270 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+K+D+ P I DSG+GGL V+++M +PE I++ D PYG +
Sbjct: 25 IKMDSRP--------IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQI 76
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
++ + + +L K + VIACNTA + E++ + LG + P A T
Sbjct: 77 REFTWQMVNFLLTK-NVKMIVIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTN 134
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SG + I+ TP T++ I + + ++ VE ++ KK
Sbjct: 135 SGKVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKV 190
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--I 237
+ GK D ++L CTHYPL+ + + + V +D+ R LL I
Sbjct: 191 VYETLSPLVGK-LDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEI 249
Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
N + H + + P Q
Sbjct: 250 NHNWQNKHGGHHFYTTASPKGFKEIAEQWL 279
>gi|317471031|ref|ZP_07930406.1| Asp/Glu/Hydantoin racemase [Anaerostipes sp. 3_2_56FAA]
gi|316901472|gb|EFV23411.1| Asp/Glu/Hydantoin racemase [Anaerostipes sp. 3_2_56FAA]
Length = 272
Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 6/249 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V +++ +P+ IY D PYG + + + + +L
Sbjct: 7 NAPIGVFDSGVGGLTVAREIMRQLPDESMIYFGDTARVPYGTKSKDTVIRYSRQIVNFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA L +L+ + P AA T++ I I+ T AT+
Sbjct: 67 SK-NVKAIVIACNTASALAMHKLQQEYIVPMIGMVRPGAIAAARATKNHHIGIIGTNATV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + VEE +I ED + + + E + +
Sbjct: 126 KSGQYGKYLRELNPDVTVVTKACPLFVPLVEEGLIDDRITEDMVSRYLR----EFDQYQI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
D ++L CTHYPL+ + + V ++ + A+ R LL ++ ++ +
Sbjct: 182 DSLILGCTHYPLLQNPIKNFVGDNVTLINPAYETAKSLRELLKEREMEAESGHTAEYHYY 241
Query: 252 LSGKPDIAM 260
+S D +
Sbjct: 242 VSDMEDQFL 250
>gi|153815937|ref|ZP_01968605.1| hypothetical protein RUMTOR_02182 [Ruminococcus torques ATCC 27756]
gi|145846756|gb|EDK23674.1| hypothetical protein RUMTOR_02182 [Ruminococcus torques ATCC 27756]
Length = 279
Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 13/264 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++D K + +FDSG+GGL V +++ +P + +Y D PYG+ + +
Sbjct: 5 MQMD-----CKKTAPVGVFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTI 59
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ + L Q VIACNTA L D +R F +P + A T++
Sbjct: 60 IRFSEQII-RFLKTKQVKAIVIACNTASALALDAVRDEFDIPIMGVVIPGARAAVETTRN 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ ++ T AT++ + +I S + + + VEE + E+ I
Sbjct: 119 QKVGVIGTDATVQSGMYTKVIQSMAPDIEVIEKACPLFVPLVEEGFKEHVVTEE----VI 174
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E + D ++L CTHYPL+ R + ++ + A + LL
Sbjct: 175 EYYLESMRHTQIDAMILGCTHYPLLRSKIRDYLGEEIKIVNPAYETAMDLKKLLYEKEMA 234
Query: 241 QTRVFDDH---ALFLSGKPDIAMR 261
H + ++S + R
Sbjct: 235 NDGTDAQHSVYSFYVSDAAEKFRR 258
>gi|24380092|ref|NP_722047.1| glutamate racemase [Streptococcus mutans UA159]
gi|29839525|sp|Q8DSQ5|MURI_STRMU RecName: Full=Glutamate racemase
gi|24378087|gb|AAN59353.1|AE015000_11 putative glutamate racemase [Streptococcus mutans UA159]
Length = 264
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG +K
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKT 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + V ACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWELVNFLLTKK-VKMIVFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I I+ TP T++ I Q + ++ VE + KK +
Sbjct: 111 QIGIIGTPMTIKSNIYEQKIRDLSPQMKVRSLACPKFVPIVESNKMNSSVA----KKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V+ +D+ R LL + ++
Sbjct: 167 ESLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPDVELIDSGAECVRDISVLLNYFDLNR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGL 269
+R H + + L
Sbjct: 226 SRTSKVLHHRFYTTASVASFKEIASDWLPL 255
>gi|331089823|ref|ZP_08338716.1| glutamate racemase [Lachnospiraceae bacterium 3_1_46FAA]
gi|330403520|gb|EGG83078.1| glutamate racemase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 275
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 13/264 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M++D K + +FDSG+GGL V +++ +P + +Y D PYG+ + +
Sbjct: 1 MQMD-----CKKTAPVGVFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTI 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ + L Q VIACNTA L D +R F +P + A T++
Sbjct: 56 IRFSEQII-RFLKTKQVKAIVIACNTASALALDAVRDEFDIPIMGVVIPGARAAVETTRN 114
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ ++ T AT++ + +I S + + + VEE + E+ I
Sbjct: 115 QKVGVIGTDATVQSGMYTKVIQSMAPDIEVIEKACPLFVPLVEEGFKEHVVTEE----VI 170
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E + D ++L CTHYPL+ R + ++ + A + LL
Sbjct: 171 EYYLESMRHTQIDAMILGCTHYPLLRSKIRDYLGEEIKIVNPAYETAMDLKKLLYEKEMA 230
Query: 241 QTRVFDDH---ALFLSGKPDIAMR 261
H + ++S + R
Sbjct: 231 NDGTDAQHSVYSFYVSDAAEKFRR 254
>gi|291619386|ref|YP_003522128.1| MurI [Pantoea ananatis LMG 20103]
gi|291154416|gb|ADD79000.1| MurI [Pantoea ananatis LMG 20103]
Length = 283
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 141/262 (53%), Gaps = 4/262 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ +
Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKTETFIVERVVAIVD 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I ++ L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T
Sbjct: 78 AITRRHPISLVIIACNTASTVTLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+RR+YT L+ + C I ++ S L E G ++ DEI++ ++ +
Sbjct: 137 ATVRRSYTHELVSQFAKTCKIEMLGSAELVELAEAKLHGEEVSIDEIRRIVQPWL--RMA 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +VL CTH+PL+ +Q+ P +D+ +IARR LL + A
Sbjct: 195 EPPDTVVLGCTHFPLLRDELQQILPEGTRLIDSGAAIARRTAWLLENEAPEVRSSLQNVA 254
Query: 250 LFLSGKPD-IAMRRLMQGFGLK 270
+ + + ++Q +G
Sbjct: 255 FCTELDGEAVQLSPVLQRYGFP 276
>gi|49474225|ref|YP_032267.1| glutamate racemase [Bartonella quintana str. Toulouse]
gi|81647061|sp|Q6FZU3|MURI_BARQU RecName: Full=Glutamate racemase
gi|49239729|emb|CAF26111.1| Glutamate racemase [Bartonella quintana str. Toulouse]
Length = 270
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 128/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IL FDSGIGGL VL+++R L+PE FIYVADD GFPYGNWE++ LK ++ +F+++L
Sbjct: 3 ERPILFFDSGIGGLTVLREVRVLIPETQFIYVADDAGFPYGNWEENVLKNHILKVFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P L V+ACNT TL+ +LR FP F+G VPAIK AA T+SG IS+L+TP T+
Sbjct: 63 TLYNPTLCVVACNTVSTLMMADLRKEFPHTLFVGTVPAIKLAAKQTKSGFISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI+S+ QCH+ LV S LA+ E+Y G I +E++ EI CF E+ GK T
Sbjct: 123 KRAYTRELINSFAGQCHVQLVGSEKLAAFAEDYLRGKPIDLEELRNEILPCFFEQNGKYT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251
D IVLACTHYP ++++FR+ + WPV W+D + +IA+ R LLP R+ T+ D ALF
Sbjct: 183 DTIVLACTHYPFLINLFREQALWPVKWIDPAKAIAKHIRSLLPERMYHKNTKKLKDFALF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + + L++ FGL
Sbjct: 243 TSQNITSSTKHLLKEFGLN 261
>gi|253686599|ref|YP_003015789.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|259509917|sp|C6DHQ3|MURI_PECCP RecName: Full=Glutamate racemase
gi|251753177|gb|ACT11253.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 285
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 140/266 (52%), Gaps = 4/266 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++
Sbjct: 17 PSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L
Sbjct: 77 IVNAVQLRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQKILRPWL-- 193
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ + D +VL CTH+PL+ + P +D+ +IARR L+ ++
Sbjct: 194 RLPEPPDTVVLGCTHFPLLAEELKAALPDGTRLVDSGAAIARRTAWLIANLDNPPLSTDK 253
Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 254 NLVYCLAITPKVATLWPILQRYGFDS 279
>gi|225867935|ref|YP_002743883.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus]
gi|225871149|ref|YP_002747096.1| glutamate racemase [Streptococcus equi subsp. equi 4047]
gi|254766125|sp|C0M7R0|MURI_STRE4 RecName: Full=Glutamate racemase
gi|259509918|sp|C0MGG5|MURI_STRS7 RecName: Full=Glutamate racemase
gi|225700553|emb|CAW95041.1| glutamate racemase [Streptococcus equi subsp. equi 4047]
gi|225701211|emb|CAW98144.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus]
Length = 264
Score = 304 bits (781), Expect = 6e-81, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 101/268 (37%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+ ++ +P IY+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVSELMRQLPHEKIIYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K+ + V ACNTA + +E++ + LG + P A T G
Sbjct: 53 YTWELVRFLLTKH-VKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGASAAIKATSGG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ T T+ I + ++ VE +I KK +
Sbjct: 111 KVGVIGTSMTISSGIYQEKIQLLAPTVQVTSLACPRFVPIVESN----EISSSVAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 167 ETLAPLVGK-IDTLVLGCTHYPLLRTIIQNVLGPQVKLIDSGAECVRDISVLLNYFEING 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
+R + H + + D
Sbjct: 226 SRDDEHRRHHFYTTAGSDSFQAIASAWL 253
>gi|163868315|ref|YP_001609524.1| glutamate racemase [Bartonella tribocorum CIP 105476]
gi|189082952|sp|A9IU96|MURI_BART1 RecName: Full=Glutamate racemase
gi|161017971|emb|CAK01529.1| Glutamate racemase [Bartonella tribocorum CIP 105476]
Length = 275
Score = 304 bits (781), Expect = 6e-81, Method: Composition-based stats.
Identities = 127/261 (48%), Positives = 179/261 (68%), Gaps = 3/261 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL VL++ R L+PE FIYVADD GFPYGNWE++ LK+ ++ +F+++L
Sbjct: 3 ERPVLFFDSGIGGLTVLREARVLIPEIQFIYVADDAGFPYGNWEENILKEHILNIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y P L VIACNT TL+ +LR FP + F+G VPAIK AA T+SG IS+L+TP T+
Sbjct: 63 TRYNPALCVIACNTVSTLMMADLRQKFPHVPFVGTVPAIKSAAEQTKSGFISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT+ LI+S+ QCH+ LV S LA E++ G I + ++KEI CF++K GK T
Sbjct: 123 KRAYTNELINSFAGQCHVQLVGSEKLAGFAEDHLRGKTIDSEALRKEILPCFVKKNGKCT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDDHA 249
DVIVLACTHYP +++ FR+ + W V+W+D + +IA+ R LLP +I+ + + D A
Sbjct: 183 DVIVLACTHYPFLINFFREQALWSVEWIDPAKAIAKHIRSLLPLSEKIHQKPIKKYQDFA 242
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
L S + L++GFGLK
Sbjct: 243 LLTSKNITASTEHLLKGFGLK 263
>gi|77920315|ref|YP_358130.1| glutamate racemase [Pelobacter carbinolicus DSM 2380]
gi|77546398|gb|ABA89960.1| glutamate racemase [Pelobacter carbinolicus DSM 2380]
Length = 266
Score = 304 bits (781), Expect = 6e-81, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+I +FDSG+GGL VL++++ L+P +Y+ D PYG +++ + S
Sbjct: 2 PDRAIGVFDSGVGGLTVLKEIQRLLPGEEVLYLGDTARVPYGTKSPATVRRYALEAAS-F 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + + + V+ACNTA ++ +L + F + +G + P ++A + T++G I ++ T
Sbjct: 61 LTRRRVKMLVVACNTASSVALGDLENRFK-LPVIGVIEPGARRAVSVTRTGRIGVIGTEG 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I + + + VEE + + E
Sbjct: 120 TIKSGAYTLAIKQLAPDADVVALHCPLFVPLVEEGWLDHPVT----RLAAEEYLGSLRHH 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
D +VL CTHYPL+ V +Q+ V +D+++ A L +++ +
Sbjct: 176 GIDTLVLGCTHYPLLKPVLQQVLGPQVMLIDSAEETAIAVADRLQQLSHVRPLGEAIPPQ 235
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F++ P+ R + G
Sbjct: 236 FFVTDVPERFQRVGGEFLG 254
>gi|172058162|ref|YP_001814622.1| glutamate racemase [Exiguobacterium sibiricum 255-15]
gi|229486273|sp|B1YJW7|MURI_EXIS2 RecName: Full=Glutamate racemase
gi|171990683|gb|ACB61605.1| glutamate racemase [Exiguobacterium sibiricum 255-15]
Length = 271
Score = 304 bits (781), Expect = 6e-81, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ SI + DSG+GGL V +++ +P IYV D + PYG + +++ + +
Sbjct: 1 MNRSIGVLDSGVGGLTVARELMRQLPHEQIIYVGDTLRCPYGPRPEEEIRQFTWEMIDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ + L VIACNTA ++ E R S+ +G + P + A T+S I ++ T
Sbjct: 61 VAQG-VKLIVIACNTATAVVLKEARQKL-SIPVIGVIDPGARAAVKVTRSKRIGVIGTKM 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + Q + +S VE + +++ +
Sbjct: 119 TIESNSYEKALRHVEGQVVVESLSCPPFVPLVES----SQTSGPYVERVVANTLKPLLSY 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D ++L CTHYPL+ V ++ V + + D A LL +H
Sbjct: 175 DMDTLILGCTHYPLLAEVIGRVIGPNVQLISSGDETALEVSALLDYNGITADLDRIPEHV 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
+G R
Sbjct: 235 YHATGDTRSFERIASDWL 252
>gi|227113199|ref|ZP_03826855.1| glutamate racemase [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 285
Score = 304 bits (781), Expect = 6e-81, Method: Composition-based stats.
Identities = 81/266 (30%), Positives = 140/266 (52%), Gaps = 4/266 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + +R++
Sbjct: 17 PSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFIIERVVE 76
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++G++ +L
Sbjct: 77 IVNAVQLRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRNGVVGLL 135
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT++R YT LI + + C I + S L E G I E+++ +
Sbjct: 136 ATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQRILRPWL-- 193
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ + D +VL CTH+PL+ + P +D+ +IA+R L+ ++
Sbjct: 194 RLPEPPDTVVLGCTHFPLLAEELKMALPDGTRLVDSGSAIAKRTAWLIANLDNPPLSTDK 253
Query: 247 DHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 254 NLVYCLTITPKVATLWPILQRYGFDS 279
>gi|251781827|ref|YP_002996129.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242390456|dbj|BAH80915.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
Length = 265
Score = 304 bits (781), Expect = 7e-81, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 2 MDTRP--------IGFLDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIRE 53
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K + V ACNTA + +E++ + LG + P A T G
Sbjct: 54 YTWDLVRFLLTK-NVKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKG 111
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE +I+ KK +
Sbjct: 112 QVGVIGTPMTIASDIYRQKIQLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVY 167
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 168 ESLTPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEING 226
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
+R + H + + P+I
Sbjct: 227 SRCQEKVKHHFYTTASPEIFQEIASVWL 254
>gi|170723614|ref|YP_001751302.1| glutamate racemase [Pseudomonas putida W619]
gi|229486248|sp|B1JEP3|MURI_PSEPW RecName: Full=Glutamate racemase
gi|169761617|gb|ACA74933.1| glutamate racemase [Pseudomonas putida W619]
Length = 265
Score = 304 bits (781), Expect = 7e-81, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + DSG+GGL VL +++ L+P +YVAD PYG +++R +
Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPSESLLYVADCGHVPYGEKTPDYIRQRCRRIAEFFQ 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA +LR +P +G PA+K AAA T+SG++ +L+T TL
Sbjct: 65 AQGAKAM-VLACNTATVAAVADLRERYPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E G ++++ + G
Sbjct: 124 QSAKFAALLDRFANDVRVVTQPCPGLVELIETGDLG----SLQLRQLLLGYVQPLLAAGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + + P V +D ++AR+ + LL D A +
Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPADVAIIDTGAAVARQLKRLLAARELLADGPARDAAFWS 239
Query: 253 SGKPDIAMRRL 263
S P L
Sbjct: 240 SADPRSLENIL 250
>gi|330685733|gb|EGG97369.1| glutamate racemase [Staphylococcus epidermidis VCU121]
Length = 265
Score = 304 bits (781), Expect = 7e-81, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 100/262 (38%), Gaps = 7/262 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNRPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRSGEEVKQFTTEIAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ P + +G + P + A T++ + IL T
Sbjct: 61 VE-FDIKMLVIACNTATAVALEHLQKILP-IPVIGVIEPGARTAIMTTKNQNVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I ++ ++ VE+ + I +
Sbjct: 119 TIKSEAYRKHIKRINPNVEVYGIACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 176 EADTVILGCTHYPLLYKPINDYFGGKKTVISSGLETAREVSALLTFSNEHASYTQHPPHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
F +G + + G+ +
Sbjct: 236 FFATGDTMHIENIIKEWLGMDT 257
>gi|25028959|ref|NP_739013.1| glutamate racemase [Corynebacterium efficiens YS-314]
gi|23494246|dbj|BAC19213.1| glutamate racemase [Corynebacterium efficiens YS-314]
Length = 316
Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 10/270 (3%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ P I IFDSG+GGL V + + +P IY+ D PYG ++
Sbjct: 43 SMIERPIP-GADAPIGIFDSGVGGLTVARTIIDQLPHESIIYIGDTANGPYGPLPIARVR 101
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+ + + +++++ + VIACNTA + R + +PA+++A A T++G
Sbjct: 102 EHALRIADELVERG-CKMIVIACNTASAAFLRDARERYDVPVVEVILPAVRRAVAATRNG 160
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ T T+ +L + +H + VE + +I E
Sbjct: 161 KVGVIGTVGTINSGAYQDLFAA-SPSIEVHAAACPRFVDFVERGITSGR----QILNIAE 215
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
G + + D +VL CTHYPL+ V + V + +++ A+ +L + +
Sbjct: 216 GYLEPLQAQGVDTLVLGCTHYPLLSGVIQLAMGDHVTLVSSAEETAKDVLRILSQNDLLA 275
Query: 242 T---RVFDDHALFLSGKPDIAMRRLMQGFG 268
++ +G P++ + + G
Sbjct: 276 DPTMHPTPTYSFESTGDPELFSQLSRRFLG 305
>gi|49475603|ref|YP_033644.1| glutamate racemase [Bartonella henselae str. Houston-1]
gi|81647897|sp|Q6G3D5|MURI_BARHE RecName: Full=Glutamate racemase
gi|49238410|emb|CAF27637.1| Glutamate racemase [Bartonella henselae str. Houston-1]
Length = 270
Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats.
Identities = 133/259 (51%), Positives = 181/259 (69%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL VL+++R L+PE FIYVADDVGFPYGNWE++ LK R++ +F+++L
Sbjct: 3 ERPVLFFDSGIGGLTVLREVRSLIPEKQFIYVADDVGFPYGNWEENVLKNRILKIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P L VIACNT TL+ +LR FP + F+G VPAIK AA T+SG IS+L+TP T+
Sbjct: 63 TVYNPALCVIACNTVSTLMIADLRERFPHILFVGTVPAIKLAAEQTKSGFISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+RTYT LI+S+ QCH+ LV S LA E Y G + +E++ EI CF++K GK T
Sbjct: 123 KRTYTHELINSFAGQCHVQLVGSEKLAGFAENYLRGQSVDLEELRNEILPCFVKKNGKHT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D+IVLACTHYP ++H FR+ + W V W+D S +IA+R R LLP+ HQT + ++D ALF
Sbjct: 183 DIIVLACTHYPFLLHFFREQALWHVQWIDPSKAIAKRTRSLLPQRIHHQTVKKYEDFALF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + +RL++ F L
Sbjct: 243 TSQNITSSTKRLLKEFSLN 261
>gi|323126640|gb|ADX23937.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
Length = 264
Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K + V ACNTA + +E++ + LG + P A T G
Sbjct: 53 YTWDLVRFLLTK-NVKMIVFACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE +I+ KK +
Sbjct: 111 QVGVIGTPMTIASDIYRQKIQLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V +D+ R LL +
Sbjct: 167 ESLTPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEING 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGF 267
+R + H + + P+I
Sbjct: 226 SRCQEKVKHHFYTTASPEIFQEIASVWL 253
>gi|16767395|ref|NP_463010.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|207859320|ref|YP_002245971.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|17865743|sp|P40723|MURI_SALTY RecName: Full=Glutamate racemase
gi|226707589|sp|B5QXR2|MURI_SALEP RecName: Full=Glutamate racemase
gi|16422698|gb|AAL22969.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|206711123|emb|CAR35497.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|267996437|gb|ACY91322.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160637|emb|CBW20168.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|320088535|emb|CBY98294.1| Glutamate racemase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|323132476|gb|ADX19906.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|326625851|gb|EGE32196.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
gi|332990959|gb|AEF09942.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 283
Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats.
Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 8/276 (2%)
Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56
++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG
Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA
Sbjct: 65 ETFIVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+
Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 184 RRILRPWLRMPEP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEH 241
Query: 237 INTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P + ++Q +G ++
Sbjct: 242 EAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 277
>gi|304403816|ref|ZP_07385478.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
gi|304346794|gb|EFM12626.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
Length = 269
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q I I DSG+GGL V +++ +P +Y D PYG + + + +
Sbjct: 1 MQQPIAILDSGVGGLTVAKEVMRQLPREKIVYFGDTARTPYGPRPAGEVVRFTKEIVDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ +Y P + V+ACNTA D+L+ S+ +G + P + A + T +G+I ++ T
Sbjct: 61 I-QYNPKMIVVACNTATAFALDDLKEMV-SVPVVGVIDPGARAALSRTNTGVIGVIGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + + H+ + VE+ +++ + G E
Sbjct: 119 TVRSGAYEHALKQLSPHIHVISQACPAFVPLVEQGNFRSTETFHTVQQAL-GYLREY--- 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
D ++L CTHYP + ++ V + +++ R R +L + H
Sbjct: 175 PLDCMILGCTHYPFLSESISEVMGPEVALISSAEETVREIRAILEGQGKLVSIEAEPMHR 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F SG+ + + Q G
Sbjct: 235 FFCSGEQQMFKQIATQWLG 253
>gi|331092253|ref|ZP_08341081.1| glutamate racemase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401685|gb|EGG81264.1| glutamate racemase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 276
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 16/261 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ID + I +FDSG+GGL V++++ +P + +Y D PYG+ +
Sbjct: 1 MSID-----CRKDAPIGVFDSGVGGLTVVKEIMQNLPNENLVYFGDTARVPYGSKSVDTI 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + + K VIACNT L D LR + +G V P K AA T+
Sbjct: 56 IRFSKQIVRFLQTKK-VKAIVIACNTVSALALDILRQE-TDIPIIGVVKPGSKVAAEVTE 113
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + I+ T AT++ + I Y + + + VEE +I ++
Sbjct: 114 NKRVGIIGTEATVKSGVYTKFIQQYKPDIEVLAKACPLFVPLVEEGFVDNRIA----REA 169
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
I+ E + D ++L CTHYPL+ + + ++ + A + LL N
Sbjct: 170 IDYYLHEMKQSGIDTLILGCTHYPLLYNPIMAYMGEGIRLVNPAYETALELKQLLEEKNL 229
Query: 240 HQ----TRVFDDHALFLSGKP 256
+ + S P
Sbjct: 230 ENVSQEAGKVPTYEFYSSDAP 250
>gi|291550542|emb|CBL26804.1| glutamate racemase [Ruminococcus torques L2-14]
Length = 273
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 8/257 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ K I +FDSG+GGL V +++ +P + +Y D PYG+ + + + +
Sbjct: 1 MKNKKMAPIGVFDSGVGGLTVAREISRQLPYENIVYFGDTARVPYGSKSQNTIIRFSEQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ K Q VIACNTA L D ++ F +P + A T +G + ++
Sbjct: 61 IRFLRTK-QVKAIVIACNTASALALDAVKDEFDLPIIGVVIPGARAAVEATTNGKVGVVG 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ + +I + + + + VEE + ++ IE
Sbjct: 120 TEATVQSGMYTKVIQGMNPKIEVIEKACPLFVPLVEEGFKEHIVT----REIIEYYLESM 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D ++L CTHYPL+ R+ + ++ + A + LL +
Sbjct: 176 RNTDIDAMILGCTHYPLLRSKIREYMGDKIQIVNPAYETAMDLKRLLEEEEMANDETTEH 235
Query: 248 H---ALFLSGKPDIAMR 261
H + ++S + +
Sbjct: 236 HSEYSFYVSDAAEKFRK 252
>gi|56415968|ref|YP_153043.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62182590|ref|YP_219007.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161486778|ref|NP_807142.2| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|161501913|ref|NP_457929.2| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|197364895|ref|YP_002144532.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|22001825|sp|Q8Z315|MURI_SALTI RecName: Full=Glutamate racemase
gi|75479264|sp|Q57H86|MURI_SALCH RecName: Full=Glutamate racemase
gi|81599685|sp|Q5PK79|MURI_SALPA RecName: Full=Glutamate racemase
gi|229486290|sp|B5BJP1|MURI_SALPK RecName: Full=Glutamate racemase
gi|56130225|gb|AAV79731.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62130223|gb|AAX67926.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|197096372|emb|CAR61977.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|322717091|gb|EFZ08662.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 283
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 8/276 (2%)
Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56
++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG
Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA
Sbjct: 65 ETFIVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+
Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 184 RRILRPWLRMPEP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEH 241
Query: 237 INTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P + ++Q +G ++
Sbjct: 242 EAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 277
>gi|307128966|ref|YP_003880982.1| glutamate racemase [Dickeya dadantii 3937]
gi|306526495|gb|ADM96425.1| glutamate racemase [Dickeya dadantii 3937]
Length = 290
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 146/261 (55%), Gaps = 4/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ + +
Sbjct: 22 ARPTVLVFDSGVGGLSVYDEVRKLLPDLHYIYTFDNEAFPYGEKPEQFIIERVVSIVDAV 81
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ L +IACNTA T+ LR+ F + +G VPA+K AA T++G++ +L+T AT
Sbjct: 82 EKQHPLSLVIIACNTASTISLPALRARF-NFPVVGVVPAVKPAAKLTRNGVVGLLATRAT 140
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + + C I L+ S L E G + E+ ++K ++ K +
Sbjct: 141 VQRPYTHELISRFANDCQILLLGSAELVEWGEAKLQGETVPEEVLRKILKPWL--KLPEP 198
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PL+ +Q+ P +D+ +IARR L+ ++ + + A
Sbjct: 199 PDTVVLGCTHFPLLSEELQQVLPDGTRLVDSGTAIARRTAWLIEHLDNPKLSTERNLAYC 258
Query: 252 LSGKPDI-AMRRLMQGFGLKS 271
LS P + A+ +++ +G +
Sbjct: 259 LSITPKVAALSPVLRRYGFSA 279
>gi|55820352|ref|YP_138794.1| glutamate racemase [Streptococcus thermophilus LMG 18311]
gi|81561031|sp|Q5M627|MURI_STRT2 RecName: Full=Glutamate racemase
gi|55736337|gb|AAV59979.1| glutamate racemase [Streptococcus thermophilus LMG 18311]
Length = 271
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 18/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V+++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELKRQLPYESIVYIGDSARAPYGPRPAGQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +L K + VIACNTA ++ +E++ + + LG V P A ++SG
Sbjct: 53 YTWQLVKFLLTK-DVKMIVIACNTATAVVWEEIKESL-DIPVLGVVLPGSSAAIKSSRSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ TP T+ I Q ++ +S A VE +I KK +
Sbjct: 111 QIGVIGTPMTISSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESN----EINSSVAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYPL+ + + + V +D+ R LL ++
Sbjct: 167 ESMAPLVD-RVDTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINR 225
Query: 242 TRVFDD--HALFLSGKPDIAMRRLMQGFG 268
+R D + + Q G
Sbjct: 226 SREVKDKTEEYYTTASVLGFKEIAEQWLG 254
>gi|270265151|ref|ZP_06193413.1| glutamate racemase [Serratia odorifera 4Rx13]
gi|270040785|gb|EFA13887.1| glutamate racemase [Serratia odorifera 4Rx13]
Length = 260
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 89/256 (34%), Positives = 140/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S + ++
Sbjct: 2 LVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIVSAVQQRHP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++RTY
Sbjct: 62 LAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAARLTANGVVGLLATRGTVQRTY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + + C I L+ S L E G + +KK + +E D +V
Sbjct: 121 THELIARFATDCKIELLGSSELVELAEAKLHGEAVPLATLKKILHPWLSMREP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR L+ + D+ A ++
Sbjct: 179 LGCTHFPLLAEELMQVLPEGTRLVDSGAAIARRTAWLISSQENLVSTQEDNLAYCMALNE 238
Query: 257 DI-AMRRLMQGFGLKS 271
D A+ ++QG+G KS
Sbjct: 239 DTDALLPVLQGYGFKS 254
>gi|205354293|ref|YP_002228094.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|226707590|sp|B5REZ1|MURI_SALG2 RecName: Full=Glutamate racemase
gi|205274074|emb|CAR39081.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|326629417|gb|EGE35760.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 283
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 8/276 (2%)
Query: 1 MKIDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56
++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG
Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA
Sbjct: 65 ETFIVERVVEIATAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+
Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 184 RRILRPWLRMPEP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEH 241
Query: 237 INTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P + ++Q +G ++
Sbjct: 242 EAPDAKSTDANIAYCMAMTPGAEQLLPILQRYGFET 277
>gi|70726812|ref|YP_253726.1| glutamate racemase [Staphylococcus haemolyticus JCSC1435]
gi|123659934|sp|Q4L5F5|MURI_STAHJ RecName: Full=Glutamate racemase
gi|68447536|dbj|BAE05120.1| Glutamate racemase [Staphylococcus haemolyticus JCSC1435]
Length = 266
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 102/258 (39%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ L + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGDEVKQFTTQLANKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ ++ + VIACNTA + + L+ P + +G + P + A T++ + IL T
Sbjct: 61 M-QFDIKMLVIACNTATAVALEHLQQMLP-IPVIGVIEPGSRTAIMTTKNQNVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I H++ V+ VE+ + I +
Sbjct: 119 TIKSEAYRHHIKHINPNVHVYGVACPGFVPLVEQMRYDDPTITSIV---IHQTLKQWRNT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D I+L CTHYPL+ + + AR LL N H + +H
Sbjct: 176 DADTIILGCTHYPLLYKPINDYFGGEKKVISSGLETAREVSALLTFSNEHASYTQHPEHR 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G ++Q
Sbjct: 236 FFATGDTVHIKNIILQWL 253
>gi|290579929|ref|YP_003484321.1| putative glutamate racemase [Streptococcus mutans NN2025]
gi|254996828|dbj|BAH87429.1| putative glutamate racemase [Streptococcus mutans NN2025]
Length = 264
Score = 303 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P IY+ D PYG +K
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKT 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L K + V ACNTA ++ +E++ + LG + P A T SG
Sbjct: 53 YTWELVNFLLTKK-VKMIVFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I I+ TP T++ I Q + ++ VE + KK +
Sbjct: 111 QIGIIGTPMTIKSNIYEQKILDLSPQMKVRSLACPKFVPIVESNKMNSSVA----KKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPL+ + + + V+ +D+ R LL + ++
Sbjct: 167 ESLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPDVELIDSGAECVRDISVLLNYFDLNR 225
Query: 242 TRVFD--DHALFLSGKPDIAMRRLMQGFGL 269
+R H + + L
Sbjct: 226 SRTSKVLHHRFYTTASVASFKEIASDWLPL 255
>gi|25011689|ref|NP_736084.1| glutamate racemase [Streptococcus agalactiae NEM316]
gi|77407235|ref|ZP_00784198.1| glutamate racemase [Streptococcus agalactiae H36B]
gi|77414377|ref|ZP_00790532.1| glutamate racemase [Streptococcus agalactiae 515]
gi|29839529|sp|Q8E3V7|MURI_STRA3 RecName: Full=Glutamate racemase
gi|24413229|emb|CAD47308.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159567|gb|EAO70723.1| glutamate racemase [Streptococcus agalactiae 515]
gi|77174157|gb|EAO77063.1| glutamate racemase [Streptococcus agalactiae H36B]
Length = 264
Score = 303 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D+ P I DSG+GGL V+++M +PE I++ D PYG +++
Sbjct: 1 MDSRP--------IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K + VIACNTA + E++ + LG + P A T SG
Sbjct: 53 FTWQMVNFLLTK-NVKMIVIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ I+ TP T++ I + + ++ VE ++ KK +
Sbjct: 111 KVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D ++L CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 ETLSPLVGK-LDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINH 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ H + + P Q
Sbjct: 226 NWQNKHGGHHFYTTASPKGFKEIAEQWL 253
>gi|325294218|ref|YP_004280732.1| Glutamate racemase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064666|gb|ADY72673.1| Glutamate racemase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 263
Score = 303 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 10/253 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL VL+ +R +P IY D PYG + + + + +L
Sbjct: 3 ERPIGIFDSGVGGLTVLRALRKKLPSEDLIYFGDTARVPYGTKSPKTIIRYSIEN-TKLL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + ++ACNT+ + + L+S F + LG + P + A + T+SG + ++ T AT
Sbjct: 62 KRFNVKMVIVACNTSSSYALEILKSEFSDVPILGVINPGARLAVSATKSGKVGVIGTEAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ IH C + + +EE + + ++ + + GK
Sbjct: 122 IKSGAYRKAIHFINPSCLVFEKVCPLFVPLIEEGWLNDPVTLEVARRYV----LPLLGKG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPLI + ++ V +D++ +IA LP + + + +
Sbjct: 178 IDTLVLGCTHYPLIKDILLKIC-KNVTLIDSAQAIADEVAKALP---SKKESGKGNVKIL 233
Query: 252 LSGKPDIAMRRLM 264
+S K D +
Sbjct: 234 VSDKTDRFEKIAK 246
>gi|224823853|ref|ZP_03696962.1| glutamate racemase [Lutiella nitroferrum 2002]
gi|224604308|gb|EEG10482.1| glutamate racemase [Lutiella nitroferrum 2002]
Length = 270
Score = 303 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 114/263 (43%), Gaps = 7/263 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K + I +FDSG+GGL V++ + +P IY D PYG ++ +
Sbjct: 1 MTAKARRPIGVFDSGVGGLTVVRALMDRLPFEDIIYFGDTARVPYGVKSVATIRAFSRQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISIL 126
+L +++ V+ACNT + +++R + +G + A QAA +++ I ++
Sbjct: 61 VEFLL-QHEVKALVVACNTISAVALEQVRELAGDIPVIGVIEAGAQAAVKVSKNHEIGVI 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ + IH + ++ + + VEE + ++ ++ E
Sbjct: 120 ATSTTINSNAYAREIHRLMPDARVYSQACPLFVPLVEEGWVDHPVTRLTAEEYLKTVLEE 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVF 245
D +VL CTHYPLI + +++ V+ +D++ + A +L +N R
Sbjct: 180 ----HVDTLVLGCTHYPLIKPLLTEVTGGRVELVDSALTTAEATAEVLAGLNLLNPQRGA 235
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
++ +++ P + G
Sbjct: 236 PEYRYYVTDIPLKFQTIGERFLG 258
>gi|146306097|ref|YP_001186562.1| glutamate racemase [Pseudomonas mendocina ymp]
gi|167017319|sp|A4XR64|MURI_PSEMY RecName: Full=Glutamate racemase
gi|145574298|gb|ABP83830.1| glutamate racemase [Pseudomonas mendocina ymp]
Length = 263
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q + +FDSG+GGL VL+++R L+P +YVAD PYG +++R + + +L
Sbjct: 5 QAPVGVFDSGVGGLSVLREIRQLLPNESLLYVADSGHVPYGEKSAEYIRERCVLITEHLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA ELR +P + +G PA+K AAA T+SG++ +L+T TL
Sbjct: 65 AQGAKAL-VLACNTATAAAAAELRERYPQLPIVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E A + ++ +E E
Sbjct: 124 KSAKFAALLDRFASDVRVITQPCPGLVECIEAGALQAPATRELLQGYVEPLLAE----GC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + L P V +D ++AR+ + LL + T+ +
Sbjct: 180 DTLILGCTHYPFLKPLLHSLVPDSVSLIDTGAAVARQLQRLLGQHELLATQPAQATRYWS 239
Query: 253 SGKPDIAMRRLMQGFG 268
SG L G
Sbjct: 240 SGDIQRMQAVLPLLLG 255
>gi|134299103|ref|YP_001112599.1| glutamate racemase [Desulfotomaculum reducens MI-1]
gi|134051803|gb|ABO49774.1| glutamate racemase [Desulfotomaculum reducens MI-1]
Length = 282
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 7/244 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + +R L+P IY AD PYG+ + +++R + L
Sbjct: 18 RAPIGVFDSGVGGLSVARDIRKLLPLEDIIYYADSAYCPYGDKDPQTIRQR-EKAIGEFL 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L V+ACNTA + + LR F + +G P +K A A T++G I +L+T T+
Sbjct: 77 VSQGCKLIVVACNTASSAGLEYLR-RFLKVPVVGMEPGVKPAVAATRNGKIGVLATCVTI 135
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
S+L+ Y + + L +E E++++ ++ K+
Sbjct: 136 AGDRFSSLVKRYAEETEVITQPCPGLVELIESGKLNAPETEEKLRTFLQPIL----DKKA 191
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
D IVL CTHYP + + L+ V +D ++A++ +L N + +
Sbjct: 192 DTIVLGCTHYPFLRPMLESLAGPGVSVIDTGQAVAKQVSRVLSACNLAKNSGPLGTEQFY 251
Query: 252 LSGK 255
SG
Sbjct: 252 TSGN 255
>gi|332710932|ref|ZP_08430868.1| glutamate racemase [Lyngbya majuscula 3L]
gi|332350246|gb|EGJ29850.1| glutamate racemase [Lyngbya majuscula 3L]
Length = 298
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + I IFDSG+GGL VL+++ +P IY AD PYG + + + S
Sbjct: 12 QPQSSPIGIFDSGVGGLTVLRELYKQLPSESIIYFADTARLPYGTRSTDEIVQFGFEILS 71
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ + + V+ACNT+ L + LRS F + LG + +AA Q I +++TP
Sbjct: 72 WMV-QQDVKMVVMACNTSSALALETLRSEF-DIPMLGLILPGARAA-LHQGRRIGVIATP 128
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT N I + V VE+ ++ +E
Sbjct: 129 ATAASNAYRNAILEVEPTAQVWQVGCPEFVPLVEQNRLCEPYTTAVARQYLEPLLA---- 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +V CTHYP + + R++ P V +D + + A L I T
Sbjct: 185 AQIDTLVYGCTHYPHLEPILREILPPDVKLVDPAKYVVAAAAQELDLIGGKNTGEARPTR 244
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+SG P ++ +Q G
Sbjct: 245 FGVSGCPQQFAQQSLQWLGY 264
>gi|312792765|ref|YP_004025688.1| glutamate racemase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179905|gb|ADQ40075.1| glutamate racemase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 267
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 6/242 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K + V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKRIGVIGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VEE ++ K+ +E E K D
Sbjct: 123 SGAFEKKILELDSSLQVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFNEKEID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + V +++ P V ++ + A++ LL + + + F +
Sbjct: 179 TLVLGCTHYPFLQDVIKKVLP-DVMLINPALETAKQVFELLKENDMLNSSSEEPTYYFYA 237
Query: 254 GK 255
Sbjct: 238 SD 239
>gi|290477203|ref|YP_003470120.1| glutamate racemase [Xenorhabdus bovienii SS-2004]
gi|289176553|emb|CBJ83362.1| glutamate racemase [Xenorhabdus bovienii SS-2004]
Length = 287
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 90/262 (34%), Positives = 139/262 (53%), Gaps = 4/262 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + +ILIFDSG+GGL V Q++R L+PE H+IY D+ FPYG + +R++ +
Sbjct: 21 PKTARPTILIFDSGVGGLSVYQEIRQLLPELHYIYAFDNEAFPYGEKTAEVIIERVVQVV 80
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+I ++ + +IACNTA T+ LR F S +G VPAIK AA T + +I +L+T
Sbjct: 81 DEIQKRHPLAIVIIACNTASTVSLPALRERF-SFPVVGVVPAIKPAAKLTCNRVIGLLAT 139
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ R YT LI + + C +H + S L E G KI + ++K ++ KE
Sbjct: 140 RATVNRDYTKELIARFATDCQVHSIGSAELVELAERKLHGEKIPLEILEKILKPWLRMKE 199
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++L CTH+PLI Q+ P +D+ +IARR L+ N+ D+
Sbjct: 200 P--PDTVILGCTHFPLIAEELSQVFPDGTRLIDSGAAIARRTVWLVKNQNSLFLTTADNL 257
Query: 249 ALFLSGK-PDIAMRRLMQGFGL 269
A A+R +++ +G
Sbjct: 258 AYCTKIDLNSEALRPVLRDYGF 279
>gi|158429235|pdb|2OHO|A Chain A, Structural Basis For Glutamate Racemase Inhibitor
gi|158429236|pdb|2OHO|B Chain B, Structural Basis For Glutamate Racemase Inhibitor
Length = 273
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+
Sbjct: 10 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 61
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + + V ACNTA + +E+++ + LG V P A T G
Sbjct: 62 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 119
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE ++ KK +
Sbjct: 120 QVGVIGTPMTVASDIYRKKIQLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVY 175
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 176 DSLAPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 234
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +H F + P+I
Sbjct: 235 NYHQKAVEHRFFTTANPEIFQEIASIWL 262
>gi|312621720|ref|YP_004023333.1| glutamate racemase [Caldicellulosiruptor kronotskyensis 2002]
gi|312202187|gb|ADQ45514.1| glutamate racemase [Caldicellulosiruptor kronotskyensis 2002]
Length = 267
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 6/242 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K + V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDVPIVAVIEPGAEAAVKATKNKRIGVIGTEGTIS 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + VEE ++ K+ +E E K D
Sbjct: 123 SGAFEKKILELDNSIKVFSKPCPLFVPLVEEGWTDKEVTYLIAKEYLE----EFNEKAID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + V R++ P V ++ + A++ LL + + F +
Sbjct: 179 TLVLGCTHYPFLQDVIRKVLP-NVMLINPALETAKQVFELLKMNDMLNNSSEEPTYYFYA 237
Query: 254 GK 255
Sbjct: 238 SD 239
>gi|229822946|ref|ZP_04449016.1| hypothetical protein GCWU000282_00238 [Catonella morbi ATCC 51271]
gi|229787759|gb|EEP23873.1| hypothetical protein GCWU000282_00238 [Catonella morbi ATCC 51271]
Length = 286
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 97/259 (37%), Gaps = 12/259 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I DSG GGL V+++ +P IY+ D+ PYG +K + L +L K
Sbjct: 8 PIGFIDSGYGGLTVVKQSLKQLPNESIIYLGDNARCPYGPRSMEEVKDYIWQLTRFLLKK 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ VIACNT +E+R T + +G + P + A T++ I ++ T T+
Sbjct: 68 G-IKMLVIACNTGTAAALEEIRQTL-DIPVVGVIHPGSRAAIERTENNHIGVIGTQGTIA 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
++ + V+ VE++ + ++++ + D
Sbjct: 126 SNLYERVMKDKADYLQVTSVACPSFVQLVEDHQLNSPLAWQQVRE----SLSAFDQTGID 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-----FDDH 248
+V+ CTHYP + + + + V +D+ LL ++
Sbjct: 182 TLVMGCTHYPHLKPLIQAVMGQGVTLIDSGVETLNEVSMLLDYFGLSRSAKDAQIQPPSQ 241
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+ +G + +
Sbjct: 242 HFYTTGDAKQFAQFVTAWL 260
>gi|37528551|ref|NP_931896.1| glutamate racemase [Photorhabdus luminescens subsp. laumondii TTO1]
gi|81572235|sp|Q7MYE4|MURI_PHOLL RecName: Full=Glutamate racemase
gi|36787989|emb|CAE17106.1| glutamate racemase [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 287
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 90/263 (34%), Positives = 141/263 (53%), Gaps = 4/263 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + ++L+FDSG+GGL + Q++R L+P+ H+IYV D+ FPYG + + +R++ +
Sbjct: 21 NKAARPTVLVFDSGVGGLSIYQEIRQLLPDLHYIYVFDNEAFPYGEKSEEFIVERVVQIV 80
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I K+ + VIACNTA T+ LR F S +G VPAIK AA T++G++ +L+T
Sbjct: 81 GAIQQKHPLTIVVIACNTASTVSLPALRERF-SFPVVGVVPAIKPAAKLTRNGVVGLLAT 139
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ R+YT LI + + C I + S L E G K+ D +KK ++ K+
Sbjct: 140 RATVNRSYTKELIEKFATGCRIESIGSAELVELAEIKLHGGKVSPDILKKILKPWLGMKK 199
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+PL+ Q+ P +D+ +IARR L+ N D
Sbjct: 200 P--PDTVVLGCTHFPLLAEELVQILPDGTRLIDSGVAIARRTAWLVKHQNNLVCTSADSL 257
Query: 249 ALFLSGKPDI-AMRRLMQGFGLK 270
A + D A+ ++Q +G
Sbjct: 258 AYCMKVNTDTDALIPVLQEYGFS 280
>gi|115373706|ref|ZP_01461000.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1]
gi|310823643|ref|YP_003956001.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1]
gi|115369253|gb|EAU68194.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1]
gi|309396715|gb|ADO74174.1| Glutamate racemase [Stigmatella aurantiaca DW4/3-1]
Length = 270
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 111/263 (42%), Gaps = 8/263 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + I +FDSG+GGL VL+ + +P + +Y+ D PYG + + +
Sbjct: 1 MRQGSHSPIGVFDSGVGGLTVLKALMERLPHENTLYLGDTARVPYGTKSGEVVTRYSLKN 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+L+K L V+ACNTA + L + S+ LG + P + A T+ G + ++
Sbjct: 61 AQFLLEKG-IKLLVVACNTASAVALPALSAAL-SVPVLGVIAPGAQAALRRTRGGGVGVI 118
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
TP T+R + + + + + + EE ++ ++ +
Sbjct: 119 GTPGTIRSGAYQRELQAADPKVQVKARACPLFVPLAEEGWTQGEVPALVARE----YLAD 174
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-INTHQTRVF 245
+ D +VL CTHYPL+ + Q+ V +D++++ A LL +
Sbjct: 175 FAREGVDTLVLGCTHYPLLKDIIAQVVGPRVSLVDSAEATAEAVALLLEQTQGLAPPGGV 234
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
H F++ P+ M + G
Sbjct: 235 PVHGYFVTDVPERFMEVGARFLG 257
>gi|228476279|ref|ZP_04060981.1| glutamate racemase [Staphylococcus hominis SK119]
gi|314936670|ref|ZP_07844017.1| glutamate racemase [Staphylococcus hominis subsp. hominis C80]
gi|228269682|gb|EEK11184.1| glutamate racemase [Staphylococcus hominis SK119]
gi|313655289|gb|EFS19034.1| glutamate racemase [Staphylococcus hominis subsp. hominis C80]
Length = 265
Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 97/258 (37%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K L + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKTFTTQLANKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ P + +G + P + A T++ + IL T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQQLLP-IPVIGVIEPGARTAIMTTKNQKVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I ++ V+ VE+ + I
Sbjct: 119 TIKSEAYRHHIKRINPNVEVYGVACPGFVPLVEQMRYDDPTITSIV---IHQTLKHWRNT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 176 DADTVILGCTHYPLLYKPINDYFGGNKKVISSGLETAREVSALLTFSNEHASYTQHPKHR 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G + Q
Sbjct: 236 FFATGDTVHIKHIISQWL 253
>gi|307945604|ref|ZP_07660940.1| glutamate racemase [Roseibium sp. TrichSKD4]
gi|307771477|gb|EFO30702.1| glutamate racemase [Roseibium sp. TrichSKD4]
Length = 267
Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 132/258 (51%), Positives = 181/258 (70%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ILIFDSGIGGL VL+++R L+P +YVADD GFP G+WE+ LK+RL+ LF +L
Sbjct: 4 RQPILIFDSGIGGLTVLRELRLLLPYETILYVADDAGFPLGDWEEPPLKERLLQLFDGLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++QP SVIACNTAFTL + LR+ P AF+G VPAIK AA T SGL+S+L+TP T+
Sbjct: 64 VRFQPKASVIACNTAFTLAGEALRAAQPDHAFVGTVPAIKPAAERTASGLVSVLATPGTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
RR YT NLI S+ +QCH+ LV S LA+ E+ G + ++ +K EI+ CF+EK+G+RT
Sbjct: 124 RRAYTKNLIDSFATQCHVRLVGSDALAAHAEQELRGEPVSDEALKAEIDACFLEKDGRRT 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D++VLACTHYP + + FR+L+PWPVDWLD + +IAR+ +L + D A F
Sbjct: 184 DIVVLACTHYPFLANRFRKLAPWPVDWLDPAGAIARQVVRVLGDDLYLEPVSVPDTAHFT 243
Query: 253 SGKPDIAMRRLMQGFGLK 270
SG+ +++RL+ GFGL
Sbjct: 244 SGQSTASLKRLLAGFGLS 261
>gi|253991699|ref|YP_003043055.1| glutamate racemase [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253783149|emb|CAQ86314.1| glutamate racemase [Photorhabdus asymbiotica]
Length = 268
Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 88/264 (33%), Positives = 141/264 (53%), Gaps = 4/264 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K ++ ++L+FDSG+GGL V Q++R L+P+ H+IYV D+ FPYG + + +R++ +
Sbjct: 1 MNKTVRPTVLVFDSGVGGLSVYQEIRQLLPDLHYIYVFDNEAFPYGEKSEEFIIERVVEI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
S + K+ + VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+
Sbjct: 61 VSAVQQKHPLAIVVIACNTASTVSLPALRERF-HFSVVGVVPAIKPAAKLTCNGIVGLLA 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ R+YT LI + + C I + S L E G K+ + +K+ ++ K
Sbjct: 120 TRATVNRSYTKELIERFAADCRIESIGSAELVELAEAKLHGNKVSSEALKQILKPWLKMK 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D +VL CTH+PL+ Q+ P +D+ +IARR L+ D
Sbjct: 180 EP--PDTVVLGCTHFPLLAEELIQVLPDGTRLIDSGAAIARRTAWLVKHQENLVCTSIDS 237
Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270
A + D A+ ++Q +G
Sbjct: 238 LAYCMKMNVDTDALIPVLQAYGFS 261
>gi|197303990|ref|ZP_03169022.1| hypothetical protein RUMLAC_02727 [Ruminococcus lactaris ATCC
29176]
gi|197296958|gb|EDY31526.1| hypothetical protein RUMLAC_02727 [Ruminococcus lactaris ATCC
29176]
Length = 273
Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 8/257 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K + +FDSG+GGL V +++ +P+ + +Y D PYG+ + + + +
Sbjct: 1 MMNKKTAPVGVFDSGVGGLTVAREISRQLPDENIVYFGDTARVPYGSKSQNTIIRFSEQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + VIACNTA L D ++ F +P + A T++ + ++
Sbjct: 61 I-RFLKTKEVKAIVIACNTASALALDAVKDEFDIPILGVVIPGARAAVEATKNRKVGVVG 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ + +I + + + + VEE ++ E+ IE
Sbjct: 120 TEATVQSGMYTKVIQGMNPEITVIEKACPLFVPLVEEGFKEHQVTEE----VIEYYLESM 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D ++L CTHYPL+ R + ++ + A +CLL +
Sbjct: 176 RSTDIDAMILGCTHYPLLRSKIRAYMGDKIQIVNPAYETAMDLKCLLEENDMANDGTEGQ 235
Query: 248 H---ALFLSGKPDIAMR 261
H + ++S + +
Sbjct: 236 HSNYSFYVSDAAEKFRK 252
>gi|89095339|ref|ZP_01168257.1| glutamate racemase [Oceanospirillum sp. MED92]
gi|89080414|gb|EAR59668.1| glutamate racemase [Oceanospirillum sp. MED92]
Length = 276
Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 113/256 (44%), Gaps = 3/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL ++ L+P IY+ D PYG ++ + + ++
Sbjct: 4 NLPIGVFDSGVGGLTVLNAIKDLLPNEDLIYLGDTARVPYGTKSSASVIRYAEQAAAALI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + L VIACNTA + D L+ P +A +G + P + A TQ+ I +++T T
Sbjct: 64 CR-EVKLLVIACNTASAVAVDHLQKLNPEIAVVGVIEPGADASCAATQNNHIGVIATEGT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I + + + + EE ++ E +K+ +
Sbjct: 123 VNNQAYQSAILKRNPNASVVAQACSLFVALAEEGWHEGELVESIVKECLRPLLESDYQTN 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+P++ R + V+ +D++++ A+ + L + +
Sbjct: 183 MDTLVLGCTHFPVLKESIRNIVGDNVELVDSAETTAKVVKHYLTEKELLNGQDDGRVSFL 242
Query: 252 LSGKPDIAMRRLMQGF 267
++ P + R+ + F
Sbjct: 243 VTDDP-VRFSRVARNF 257
>gi|225571415|ref|ZP_03780411.1| hypothetical protein CLOHYLEM_07513 [Clostridium hylemonae DSM
15053]
gi|225159891|gb|EEG72510.1| hypothetical protein CLOHYLEM_07513 [Clostridium hylemonae DSM
15053]
Length = 273
Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 8/254 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K I +FDSG+GGL V +++ +P+ + +Y D PYG+ + + + +
Sbjct: 3 SNKDRTAPIGVFDSGVGGLTVAREIMRQLPDENIVYFGDTARVPYGSKSRNNIIRFSRQI 62
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
L+ VIACNTA L D ++ + +G + P + A T+S I ++
Sbjct: 63 I-RFLETKGVKAIVIACNTASALALDVVKEE-SGIPIIGVIVPGARAAVKETKSKKIGVV 120
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT++ S +I + + + VEE + ++ IE E
Sbjct: 121 GTEATIQSHTYSKVITDMEPEASVIGKPCPLFVPLVEEGFAKHHVTDE----IIEYYLDE 176
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVF 245
+ D ++L CTHYPL+ + V+ ++ + A + LL + + +
Sbjct: 177 MKHSDIDTMILGCTHYPLLRSRIMEYFGENVNIVNPAYETAMDLKALLAEHDMENNSGSL 236
Query: 246 DDHALFLSGKPDIA 259
+ ++S +
Sbjct: 237 ARYEFYVSDTAEKF 250
>gi|222530006|ref|YP_002573888.1| glutamate racemase [Caldicellulosiruptor bescii DSM 6725]
gi|222456853|gb|ACM61115.1| glutamate racemase [Caldicellulosiruptor bescii DSM 6725]
Length = 267
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 6/242 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K + V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDVPIVAVIEPGAEAAVRSTKNKKIGVIGTEGTIS 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + VEE ++ K+ +E E K D
Sbjct: 123 SGAFEKKILELDNSIKVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFNEKAID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + V R++ P V ++ + A++ LL + + F +
Sbjct: 179 TLVLGCTHYPFLQDVIRKVLP-NVMLINPALETAKQVFELLKMNDMLNNSSEEPTYYFYA 237
Query: 254 GK 255
Sbjct: 238 SD 239
>gi|50913675|ref|YP_059647.1| glutamate racemase [Streptococcus pyogenes MGAS10394]
gi|68052498|sp|Q5XDP9|MURI_STRP6 RecName: Full=Glutamate racemase
gi|50902749|gb|AAT86464.1| Glutamate racemase [Streptococcus pyogenes MGAS10394]
Length = 264
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 106/268 (39%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+
Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + + V ACNTA + +E+++T + LG V P A T G
Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKATL-DIPVLGVVLPGASAAIKSTTKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE ++ KK +
Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 DSLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +H F + P+I
Sbjct: 226 NYHQKAVEHRFFTTANPEIFQEIASIWL 253
>gi|163759593|ref|ZP_02166678.1| glutamate racemase [Hoeflea phototrophica DFL-43]
gi|162283190|gb|EDQ33476.1| glutamate racemase [Hoeflea phototrophica DFL-43]
Length = 263
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 121/260 (46%), Positives = 182/260 (70%), Gaps = 1/260 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +++FDSGIGGL VL++ R +MP F+YVADD GFPYG WE+ AL+ R++ LF+ ++
Sbjct: 3 ERPVVVFDSGIGGLSVLREARVIMPGRRFVYVADDAGFPYGAWEEGALRDRIVGLFAGLI 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K+ P L++IACNTA T++ LR+ +P + F+G VPAIK AA T+SGL+S+L+TP T+
Sbjct: 63 EKHNPALALIACNTASTIVMPALRAAYPELPFVGTVPAIKPAAERTKSGLVSVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI Y + H+ LV S LA+ E Y + E +K EI+ CF+E++G++T
Sbjct: 123 KRQYTRDLIRDYADKVHVRLVGSENLAALAETYMRKGFVDEAAVKAEIDPCFVERDGQKT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTHQTRVFDDHALF 251
D++VLACTH+P +V+ R+++PWPVDW+D +++IARRA ++ + H D +F
Sbjct: 183 DIVVLACTHFPFLVNRMRKMAPWPVDWIDPAEAIARRALAIVDTLPGGHALPDARDSVVF 242
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
SG PD + RLM GFGL +
Sbjct: 243 TSGNPDYSALRLMHGFGLTA 262
>gi|15674511|ref|NP_268685.1| glutamate racemase [Streptococcus pyogenes M1 GAS]
gi|71910117|ref|YP_281667.1| glutamate racemase [Streptococcus pyogenes MGAS5005]
gi|20177988|sp|Q9A1B7|MURI_STRP1 RecName: Full=Glutamate racemase
gi|158429234|pdb|2OHG|A Chain A, Structural Basis For Glutamte Racemase Inhibition
gi|158429237|pdb|2OHV|A Chain A, Structural Basis For Glutamate Racemase Inhibition
gi|13621614|gb|AAK33406.1| putative glutamate racemase [Streptococcus pyogenes M1 GAS]
gi|71852899|gb|AAZ50922.1| glutamate racemase [Streptococcus pyogenes MGAS5005]
Length = 264
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+
Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + + V ACNTA + +E+++ + LG V P A T G
Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE ++ KK +
Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 DSLAPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +H F + P+I
Sbjct: 226 NYHQKAVEHRFFTTANPEIFQEIASIWL 253
>gi|240850640|ref|YP_002972040.1| glutamate racemase [Bartonella grahamii as4aup]
gi|240267763|gb|ACS51351.1| glutamate racemase [Bartonella grahamii as4aup]
Length = 272
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 126/261 (48%), Positives = 177/261 (67%), Gaps = 3/261 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL V ++ R L+PE FIYVADD GFPYGNW+++ LK+R++ +F+++L
Sbjct: 3 ERPVLFFDSGIGGLTVFREARILIPEMQFIYVADDAGFPYGNWKENILKERILKIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y P L VIACNT TL+ +LR F + F+G VPAIK AA T+SG IS+L+TP T+
Sbjct: 63 TRYNPALCVIACNTVSTLMMADLRQNFSHVPFVGTVPAIKSAAEQTKSGFISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT+ LI+S+ QCH+ LV S LA E+Y G I +E++KEI CF+EK G+ T
Sbjct: 123 KRAYTNELINSFAGQCHVQLVGSKKLAGFAEDYLRGKSINSEELRKEILPCFVEKNGQYT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDDHA 249
DVIVLACTHYP +++ FR+ + W V+W+D + +IA+ R LLP +++ + + D A
Sbjct: 183 DVIVLACTHYPFLINFFREHALWSVEWIDPAKAIAKHIRSLLPLSEKVHDQYIKKYQDFA 242
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
L S L +GFGLK
Sbjct: 243 LLTSKNITSLTENLFKGFGLK 263
>gi|298490221|ref|YP_003720398.1| glutamate racemase ['Nostoc azollae' 0708]
gi|298232139|gb|ADI63275.1| glutamate racemase ['Nostoc azollae' 0708]
Length = 284
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 9/263 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ Q +I +FDSG+GGL VL+++ +P IY D PYG + + + +
Sbjct: 15 SDQNSQPAIGVFDSGVGGLTVLRQIYKQLPNESIIYFGDTAHLPYGIRSQAEILQYVREI 74
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ + + + ++ACNT+ L + +R F LG V P + A Q I ++
Sbjct: 75 L-KWMQQQRVKMVIMACNTSSALALENVRQEF-DFPILGVVLPGARAAVQ--QGKRIGVI 130
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+TPAT + I + VS +E+ +I + + +
Sbjct: 131 ATPATAKSNAYRQAIMEIQPDVQVWQVSCPEFVPLIEQN----RIHDPYTTEVAKSYLEP 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D +V CTHYP + V L P V +D S + L ++ TR+
Sbjct: 187 LIKQEIDTLVYGCTHYPHLAPVLGALLPSYVKLVDPSVHVVAACAQELDLLSIRNTRLPM 246
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
+SG P + +Q G
Sbjct: 247 PTRFAVSGCPQQFAQSGLQWLGY 269
>gi|38234423|ref|NP_940190.1| glutamate racemase [Corynebacterium diphtheriae NCTC 13129]
gi|81564603|sp|Q6NFN4|MURI_CORDI RecName: Full=Glutamate racemase
gi|38200686|emb|CAE50382.1| glutamate racemase [Corynebacterium diphtheriae]
Length = 265
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 9/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P IY+ D PYG +++ + + +++
Sbjct: 3 NAPIGIFDSGVGGLTVARVIMEQLPNESVIYIGDTANSPYGPKPIAQVRELSLAIGEELV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + VIACNTA + +LR F + LG + PA+++A + T++G I ++ T T
Sbjct: 63 RRG-CKMIVIACNTATSAALRDLRERF-DVPVLGVILPAVRRAVSTTRNGKIGVIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ L + +H + S VE + +I +G +
Sbjct: 121 IKSGAYQELFAA-SPSVEVHAQACPSFVSFVERGITSGR----QILGVAQGYVEPLQAAG 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ V + V + +++ A+ L + + F
Sbjct: 176 VDTLVLGCTHYPLLTGVIQLAMGDRVTLVSSAEETAKDVFKTLSMTDMLASEDSTPVRTF 235
Query: 252 -LSGKPDIAMRRLMQGFG 268
+G P + + + G
Sbjct: 236 ESTGDPVLFAQLAERFLG 253
>gi|56808577|ref|ZP_00366308.1| COG0796: Glutamate racemase [Streptococcus pyogenes M49 591]
gi|94987933|ref|YP_596034.1| glutamate racemase [Streptococcus pyogenes MGAS9429]
gi|94991817|ref|YP_599916.1| glutamate racemase [Streptococcus pyogenes MGAS2096]
gi|209558858|ref|YP_002285330.1| glutamate racemase [Streptococcus pyogenes NZ131]
gi|166231057|sp|Q1JDD6|MURI_STRPB RecName: Full=Glutamate racemase
gi|166231058|sp|Q1JNA9|MURI_STRPC RecName: Full=Glutamate racemase
gi|226707592|sp|B5XJX3|MURI_STRPZ RecName: Full=Glutamate racemase
gi|94541441|gb|ABF31490.1| glutamate racemase [Streptococcus pyogenes MGAS9429]
gi|94545325|gb|ABF35372.1| Glutamate racemase [Streptococcus pyogenes MGAS2096]
gi|209540059|gb|ACI60635.1| Glutamate racemase [Streptococcus pyogenes NZ131]
Length = 264
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 104/268 (38%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+
Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + + V ACNTA + +E+++ + LG V P A T G
Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE ++ KK +
Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 DSLAPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + H F + P+I
Sbjct: 226 NYHQKAVKHRFFTTANPEIFQEIASIWL 253
>gi|293393497|ref|ZP_06637807.1| glutamate racemase [Serratia odorifera DSM 4582]
gi|291423832|gb|EFE97051.1| glutamate racemase [Serratia odorifera DSM 4582]
Length = 260
Score = 301 bits (773), Expect = 5e-80, Method: Composition-based stats.
Identities = 86/256 (33%), Positives = 142/256 (55%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + + +Y
Sbjct: 2 LVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEQFIVERVLEIVGAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ +IACNTA T+ LR+ F S +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LAIVIIACNTASTVSLPALRARF-SFPVVGVVPAIKPAAKLTANGIVGLLATRGTVQRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + + C I L+ S L E G ++ +KK ++ +E D +V
Sbjct: 121 THELIARFATDCKIELLGSSELVELAEAKLHGEEVPLAALKKILQPWLSMREP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARRA L+ ++ ++ A ++
Sbjct: 179 LGCTHFPLLADELMQVLPQGTRLVDSGAAIARRAAWLISSQENLRSSQEENVAYCMALND 238
Query: 257 DI-AMRRLMQGFGLKS 271
D A+ ++Q +G S
Sbjct: 239 DTDALLPVLQSYGFNS 254
>gi|21909798|ref|NP_664066.1| glutamate racemase [Streptococcus pyogenes MGAS315]
gi|28896509|ref|NP_802859.1| glutamate racemase [Streptococcus pyogenes SSI-1]
gi|25453114|sp|Q8K8I8|MURI_STRP3 RecName: Full=Glutamate racemase
gi|21903983|gb|AAM78869.1| putative glutamate racemase [Streptococcus pyogenes MGAS315]
gi|28811763|dbj|BAC64692.1| putative glutamate racemase [Streptococcus pyogenes SSI-1]
Length = 264
Score = 301 bits (773), Expect = 5e-80, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 104/268 (38%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+
Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + + V ACNTA + +E+++ + LG V P A T G
Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE ++ KK +
Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 DSLAPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + H F + P+I
Sbjct: 226 NYHQKAVKHRFFTTANPEIFQEIASIWL 253
>gi|283787352|ref|YP_003367217.1| glutamate racemase [Citrobacter rodentium ICC168]
gi|282950806|emb|CBG90482.1| glutamate racemase [Citrobacter rodentium ICC168]
Length = 283
Score = 301 bits (773), Expect = 5e-80, Method: Composition-based stats.
Identities = 82/272 (30%), Positives = 143/272 (52%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNVAFPYGEKSEEFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + + L+VIACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQQRSPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 128 GIVGLLATRGTVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGKPVPLEELQRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ + P +D+ +IARR LL
Sbjct: 188 RPWL--RMSEPPDTVVLGCTHFPLLKEELLHVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 246 AKSTAANIAYCMALTPETEQLLPVLQRYGFET 277
>gi|15924141|ref|NP_371675.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50]
gi|15926734|ref|NP_374267.1| glutamate racemase [Staphylococcus aureus subsp. aureus N315]
gi|21282762|ref|NP_645850.1| glutamate racemase [Staphylococcus aureus subsp. aureus MW2]
gi|49485988|ref|YP_043209.1| glutamate racemase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57650260|ref|YP_186024.1| glutamate racemase [Staphylococcus aureus subsp. aureus COL]
gi|87161415|ref|YP_493747.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194852|ref|YP_499650.1| glutamate racemase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148267642|ref|YP_001246585.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH9]
gi|150393697|ref|YP_001316372.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH1]
gi|151221275|ref|YP_001332097.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979472|ref|YP_001441731.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu3]
gi|161509325|ref|YP_001574984.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221140452|ref|ZP_03564945.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317067|ref|ZP_04840280.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253731764|ref|ZP_04865929.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733613|ref|ZP_04867778.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH130]
gi|255005936|ref|ZP_05144537.2| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257795120|ref|ZP_05644099.1| glutamate racemase [Staphylococcus aureus A9781]
gi|258407172|ref|ZP_05680321.1| glutamate racemase [Staphylococcus aureus A9763]
gi|258421737|ref|ZP_05684658.1| glutamate racemase [Staphylococcus aureus A9719]
gi|258432919|ref|ZP_05688608.1| glutamate racemase [Staphylococcus aureus A9299]
gi|258443409|ref|ZP_05691752.1| glutamate racemase [Staphylococcus aureus A8115]
gi|258446082|ref|ZP_05694244.1| glutamate racemase [Staphylococcus aureus A6300]
gi|258449805|ref|ZP_05697903.1| glutamate racemase [Staphylococcus aureus A6224]
gi|258454904|ref|ZP_05702867.1| glutamate racemase [Staphylococcus aureus A5937]
gi|262048731|ref|ZP_06021613.1| glutamate racemase [Staphylococcus aureus D30]
gi|262051669|ref|ZP_06023888.1| glutamate racemase [Staphylococcus aureus 930918-3]
gi|269202763|ref|YP_003282032.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED98]
gi|282894178|ref|ZP_06302409.1| glutamate racemase [Staphylococcus aureus A8117]
gi|282919928|ref|ZP_06327657.1| glutamate racemase [Staphylococcus aureus A9765]
gi|282928673|ref|ZP_06336270.1| glutamate racemase [Staphylococcus aureus A10102]
gi|284024075|ref|ZP_06378473.1| glutamate racemase [Staphylococcus aureus subsp. aureus 132]
gi|294848141|ref|ZP_06788888.1| glutamate racemase [Staphylococcus aureus A9754]
gi|295405955|ref|ZP_06815764.1| glutamate racemase [Staphylococcus aureus A8819]
gi|296275637|ref|ZP_06858144.1| glutamate racemase [Staphylococcus aureus subsp. aureus MR1]
gi|297208211|ref|ZP_06924641.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300912288|ref|ZP_07129731.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH70]
gi|304381292|ref|ZP_07363945.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|54037867|sp|P63638|MURI_STAAN RecName: Full=Glutamate racemase
gi|54037868|sp|P63639|MURI_STAAW RecName: Full=Glutamate racemase
gi|54041261|sp|P63637|MURI_STAAM RecName: Full=Glutamate racemase
gi|56749202|sp|Q6GA64|MURI_STAAS RecName: Full=Glutamate racemase
gi|71151976|sp|Q5HGT3|MURI_STAAC RecName: Full=Glutamate racemase
gi|122539773|sp|Q2FZC6|MURI_STAA8 RecName: Full=Glutamate racemase
gi|123486328|sp|Q2FHT1|MURI_STAA3 RecName: Full=Glutamate racemase
gi|166231056|sp|A7X179|MURI_STAA1 RecName: Full=Glutamate racemase
gi|172048828|sp|A6QG53|MURI_STAAE RecName: Full=Glutamate racemase
gi|189030372|sp|A6U0W7|MURI_STAA2 RecName: Full=Glutamate racemase
gi|189030373|sp|A5IS36|MURI_STAA9 RecName: Full=Glutamate racemase
gi|189030374|sp|A8Z1T2|MURI_STAAT RecName: Full=Glutamate racemase
gi|13700950|dbj|BAB42246.1| glutamate racemase [Staphylococcus aureus subsp. aureus N315]
gi|14246921|dbj|BAB57313.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50]
gi|21204200|dbj|BAB94898.1| glutamate racemase [Staphylococcus aureus subsp. aureus MW2]
gi|49244431|emb|CAG42859.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284446|gb|AAW36540.1| glutamate racemase [Staphylococcus aureus subsp. aureus COL]
gi|87127389|gb|ABD21903.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202410|gb|ABD30220.1| glutamate racemase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740711|gb|ABQ49009.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH9]
gi|149946149|gb|ABR52085.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH1]
gi|150374075|dbj|BAF67335.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721607|dbj|BAF78024.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu3]
gi|160368134|gb|ABX29105.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724493|gb|EES93222.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728412|gb|EES97141.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH130]
gi|257789092|gb|EEV27432.1| glutamate racemase [Staphylococcus aureus A9781]
gi|257841327|gb|EEV65772.1| glutamate racemase [Staphylococcus aureus A9763]
gi|257842070|gb|EEV66498.1| glutamate racemase [Staphylococcus aureus A9719]
gi|257849359|gb|EEV73336.1| glutamate racemase [Staphylococcus aureus A9299]
gi|257851499|gb|EEV75438.1| glutamate racemase [Staphylococcus aureus A8115]
gi|257855140|gb|EEV78081.1| glutamate racemase [Staphylococcus aureus A6300]
gi|257856725|gb|EEV79628.1| glutamate racemase [Staphylococcus aureus A6224]
gi|257862784|gb|EEV85549.1| glutamate racemase [Staphylococcus aureus A5937]
gi|259160404|gb|EEW45429.1| glutamate racemase [Staphylococcus aureus 930918-3]
gi|259163187|gb|EEW47747.1| glutamate racemase [Staphylococcus aureus D30]
gi|262075053|gb|ACY11026.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED98]
gi|269940644|emb|CBI49023.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
TW20]
gi|282589712|gb|EFB94798.1| glutamate racemase [Staphylococcus aureus A10102]
gi|282594644|gb|EFB99628.1| glutamate racemase [Staphylococcus aureus A9765]
gi|282763664|gb|EFC03793.1| glutamate racemase [Staphylococcus aureus A8117]
gi|285816830|gb|ADC37317.1| Glutamate racemase [Staphylococcus aureus 04-02981]
gi|294824941|gb|EFG41363.1| glutamate racemase [Staphylococcus aureus A9754]
gi|294969390|gb|EFG45410.1| glutamate racemase [Staphylococcus aureus A8819]
gi|296886950|gb|EFH25853.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|298694438|gb|ADI97660.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED133]
gi|300886534|gb|EFK81736.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH70]
gi|302332758|gb|ADL22951.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750973|gb|ADL65150.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340275|gb|EFM06216.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312829543|emb|CBX34385.1| glutamate racemase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128549|gb|EFT84554.1| glutamate racemase [Staphylococcus aureus subsp. aureus CGS03]
gi|315196875|gb|EFU27218.1| glutamate racemase [Staphylococcus aureus subsp. aureus CGS01]
gi|320141035|gb|EFW32882.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA131]
gi|320143092|gb|EFW34882.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA177]
gi|323440701|gb|EGA98411.1| glutamate racemase [Staphylococcus aureus O11]
gi|323442356|gb|EGA99985.1| glutamate racemase [Staphylococcus aureus O46]
gi|329313818|gb|AEB88231.1| Glutamate racemase [Staphylococcus aureus subsp. aureus T0131]
gi|329725174|gb|EGG61663.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21172]
gi|329728845|gb|EGG65266.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21193]
gi|329730728|gb|EGG67107.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21189]
Length = 266
Score = 301 bits (773), Expect = 5e-80, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 102/261 (39%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ + I
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G P + + L
Sbjct: 236 FFATGDPTHITNIIKEWLNLS 256
>gi|153853948|ref|ZP_01995281.1| hypothetical protein DORLON_01272 [Dorea longicatena DSM 13814]
gi|149753330|gb|EDM63261.1| hypothetical protein DORLON_01272 [Dorea longicatena DSM 13814]
Length = 316
Score = 301 bits (773), Expect = 5e-80, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 8/255 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + +I +FDSG+GGL V +++ +P + +Y D PYG+ + + + +
Sbjct: 47 KNRNTAAIGVFDSGVGGLTVTREIMRQLPNENVVYFGDTARVPYGSKSKNNIIRFSRQII 106
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L VIACNTA L + ++ F + +G + P + A T++G I +L
Sbjct: 107 -RFLKTKNVKAIVIACNTASALALETVQQEF-DIPIIGVIVPGARAAVRETRNGQIGVLG 164
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ + I + + + + VEE KI E+ I+ +
Sbjct: 165 TEATIKSETYTKEIRKLMPEAEVIGKPCPLFVPLVEEGFAKHKITEE----VIDIYLSDM 220
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD- 246
D ++L CTHYPL+ V ++ + A + +L T
Sbjct: 221 RKSEIDTLILGCTHYPLLRSRIMAYFGEKVHIVNPAYETAMDLKKILEEQKIANTSGEPA 280
Query: 247 DHALFLSGKPDIAMR 261
+ ++S + +
Sbjct: 281 AYDFYVSDAAEKFKK 295
>gi|19745519|ref|NP_606655.1| glutamate racemase [Streptococcus pyogenes MGAS8232]
gi|139474362|ref|YP_001129078.1| glutamate racemase [Streptococcus pyogenes str. Manfredo]
gi|24418567|sp|Q8P2D3|MURI_STRP8 RecName: Full=Glutamate racemase
gi|166231061|sp|A2RG97|MURI_STRPG RecName: Full=Glutamate racemase
gi|19747638|gb|AAL97154.1| putative glutamate racemase [Streptococcus pyogenes MGAS8232]
gi|134272609|emb|CAM30876.1| glutamate racemase [Streptococcus pyogenes str. Manfredo]
Length = 264
Score = 301 bits (773), Expect = 6e-80, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+
Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + + V ACNTA + +E+++ + LG V P A T G
Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE ++ KK +
Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 DSLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +H F + P+I
Sbjct: 226 NYHQKAVEHRFFTTANPEIFQEIASIWL 253
>gi|317500702|ref|ZP_07958920.1| glutamate racemase [Lachnospiraceae bacterium 8_1_57FAA]
gi|316897896|gb|EFV19949.1| glutamate racemase [Lachnospiraceae bacterium 8_1_57FAA]
Length = 273
Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ K + +FDSG+GGL V +++ +P + +Y D PYG+ + + + +
Sbjct: 1 MDCKKTAPVGVFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTIIRFSEQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L Q VIACNTA L D +R F +P + A T++ + ++
Sbjct: 61 I-RFLKTKQVKAIVIACNTASALALDAVRDEFDIPIMGVVIPGARAAVETTRNQKVGVIG 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ + +I S + + + VEE + E+ IE
Sbjct: 120 TDATVQSGMYTKVIQSMAPDIEVIEKACPLFVPLVEEGFKEHVVTEE----VIEYYLESM 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D ++L CTHYPL+ R + ++ + A + LL
Sbjct: 176 RHTQIDAMILGCTHYPLLRSKIRDYLGEEIKIVNPAYETAMDLKKLLYEKEMANDGTDAQ 235
Query: 248 H---ALFLSGKPDIAMR 261
H + ++S + R
Sbjct: 236 HSVYSFYVSDAAEKFRR 252
>gi|71902958|ref|YP_279761.1| glutamate racemase [Streptococcus pyogenes MGAS6180]
gi|123640458|sp|Q48V50|MURI_STRPM RecName: Full=Glutamate racemase
gi|71802053|gb|AAX71406.1| glutamate racemase [Streptococcus pyogenes MGAS6180]
Length = 264
Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 104/268 (38%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+
Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + + V ACNTA + +E+++ + LG V P A T G
Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE ++ KK +
Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 DSLSPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + H F + P+I
Sbjct: 226 NYHQKAVKHRFFTTANPEIFQEIASIWL 253
>gi|312126950|ref|YP_003991824.1| glutamate racemase [Caldicellulosiruptor hydrothermalis 108]
gi|311776969|gb|ADQ06455.1| glutamate racemase [Caldicellulosiruptor hydrothermalis 108]
Length = 267
Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 6/242 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K + V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKKIGVIGTEGTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VEE ++ K+ +E E K D
Sbjct: 123 SGAFKKKILELDSSIKVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFNEKEID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + V +++ P V ++ + A++ +L + + F +
Sbjct: 179 TLVLGCTHYPFLQDVIKKVLP-DVMLINPALETAKQVFEVLKENDMLNNSSEEPTYYFYA 237
Query: 254 GK 255
Sbjct: 238 SD 239
>gi|297246515|ref|ZP_06930353.1| glutamate racemase [Staphylococcus aureus A8796]
gi|297176621|gb|EFH35884.1| glutamate racemase [Staphylococcus aureus A8796]
Length = 266
Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 102/261 (39%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQFTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ + I
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G P + + L
Sbjct: 236 FFATGDPTHITNIIKEWLNLS 256
>gi|197116675|ref|YP_002137102.1| glutamate racemase [Geobacter bemidjiensis Bem]
gi|197086035|gb|ACH37306.1| glutamate racemase [Geobacter bemidjiensis Bem]
Length = 278
Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L
Sbjct: 4 KAIGIFDSGVGGLTVLKEVVRALPQEDTIYLGDTARVPYGTKSPETVVRYSRQITRYLLS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + V+ACNTA + L+ F P + AAA T+SG + ++ T AT+
Sbjct: 64 R-DIKVLVVACNTASAVALSALQQEFSIPIVGVIEPGARAAAAVTKSGKVGVIGTTATVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG-CFIEKEGKRT 192
+ + I + + + + EE ++E+ + G + +
Sbjct: 123 SSAYTKAIKRINPEIEVVSRACPLFVPLAEEGWV-----DNEVARLTAGIYLEDLKKHGV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251
D +VL CTHYP++ V ++ V +D ++ A +L + + +H +
Sbjct: 178 DTLVLGCTHYPILRKVIAEVMGPEVTLVDAAEQTALTVAGILAEQGLLRPKGERGNHHYY 237
Query: 252 LSGKPDIAMRRLMQGFG 268
++ P +R + G
Sbjct: 238 VTDIPAGFIRIGNRFLG 254
>gi|90420932|ref|ZP_01228837.1| glutamate racemase [Aurantimonas manganoxydans SI85-9A1]
gi|90334907|gb|EAS48679.1| glutamate racemase [Aurantimonas manganoxydans SI85-9A1]
Length = 268
Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats.
Identities = 131/264 (49%), Positives = 183/264 (69%), Gaps = 7/264 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL+++R MP+ FIYVADD GFPYG+WE+ L R++ LF+++
Sbjct: 1 MNAPILVFDSGIGGLTVLRELRTAMPDRRFIYVADDAGFPYGDWEEEPLVARILDLFAEL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+D Y+P L+VIACNTA TL+ +LR+ F ++ F+G VPAIK A T+SGL+S+L+TP T
Sbjct: 61 IDTYEPSLAVIACNTASTLVLPQLRARF-AIPFVGTVPAIKPATERTRSGLVSVLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-----YACGIKIKEDEIKKEIEGCFIE 186
+RR YT +L+ ++ + C + LV S LA E A G + +D + EI CF+E
Sbjct: 120 VRRVYTRDLVEAFATHCEVRLVGSPELARLAERSLLDSEASGDQELDDAMAAEIAPCFVE 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
G+RTD++VLACTHYPLI + FR+L+PWPVDWLD +++IARRAR L + + +
Sbjct: 180 AGGQRTDIVVLACTHYPLIANHFRRLAPWPVDWLDPAEAIARRARS-LCKPGSGELPEGF 238
Query: 247 DHALFLSGKPDIAMRRLMQGFGLK 270
D A F G P MRRL++GFGL+
Sbjct: 239 DSAHFTGGAPGYQMRRLVRGFGLE 262
>gi|322417854|ref|YP_004197077.1| glutamate racemase [Geobacter sp. M18]
gi|320124241|gb|ADW11801.1| glutamate racemase [Geobacter sp. M18]
Length = 279
Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L+
Sbjct: 4 KAIGIFDSGVGGLTVLKEVVQALPQEDTIYLGDTARVPYGTKSPETVIRYSRQIARYLLN 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA + L+ F P + AAA T++G + ++ T AT+
Sbjct: 64 R-DIKLLVVACNTASAVALSALQQEFDIPIVGVIEPGARAAAAATRTGRVGVIGTAATVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I + + + EE + + +E + + + D
Sbjct: 123 SSAYTKAIKRINPDIEVVNRACPLFVPLAEEGWVDNDVARMTARLYLE----DLKQQGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
+VL CTHYP++ V Q+ V +D++ AR +L + +H ++
Sbjct: 179 TLVLGCTHYPILKEVIAQVMGPEVTLVDSAAETARTVARILSEQGLLRPVNERGNHHYYV 238
Query: 253 SGKPDIAMRRLMQGFG 268
+ P +R + G
Sbjct: 239 TDIPAGFIRVGNRFLG 254
>gi|283470360|emb|CAQ49571.1| glutamate racemase [Staphylococcus aureus subsp. aureus ST398]
Length = 266
Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ + I
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKRWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
+ D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 176 KADTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G + + L
Sbjct: 236 FFATGDTTHITNIIKEWLNLS 256
>gi|319404222|emb|CBI77815.1| Glutamate racemase [Bartonella rochalimae ATCC BAA-1498]
Length = 270
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 127/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ S+L FDSGIGGL +L+++R + EY FIY+AD+ GFPYG WE+ LK+R++ +F+ +L
Sbjct: 3 KQSLLFFDSGIGGLTILREVRLFVSEYQFIYIADNAGFPYGIWEEEILKRRILKIFTYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Y P L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SG+IS+L+TP+T+
Sbjct: 63 ELYNPALCVIACNTASTLMIKDLRRAFPNIRFVGTVPAIKLAAEQTKSGVISVLATPSTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI+S+ QCH+ LV S LA E Y G + +E++ EI CFIEK K T
Sbjct: 123 RCAYTHELINSFADQCHVQLVGSEKLAGFAENYLHGYPVNHEELRHEILPCFIEKNSKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251
D IVLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP + + D ALF
Sbjct: 183 DTIVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPINVQNKNMKKHTDFALF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S A L+Q F LK
Sbjct: 243 TSQNISPATENLLQKFHLK 261
>gi|22537740|ref|NP_688591.1| glutamate racemase [Streptococcus agalactiae 2603V/R]
gi|76787427|ref|YP_330218.1| glutamate racemase [Streptococcus agalactiae A909]
gi|76799029|ref|ZP_00781224.1| glutamate racemase [Streptococcus agalactiae 18RS21]
gi|77408489|ref|ZP_00785227.1| glutamate racemase [Streptococcus agalactiae COH1]
gi|29839527|sp|Q8DY92|MURI_STRA5 RecName: Full=Glutamate racemase
gi|123601417|sp|Q3JZT5|MURI_STRA1 RecName: Full=Glutamate racemase
gi|22534630|gb|AAN00464.1|AE014264_19 glutamate racemase [Streptococcus agalactiae 2603V/R]
gi|76562484|gb|ABA45068.1| glutamate racemase [Streptococcus agalactiae A909]
gi|76585615|gb|EAO62178.1| glutamate racemase [Streptococcus agalactiae 18RS21]
gi|77172931|gb|EAO76062.1| glutamate racemase [Streptococcus agalactiae COH1]
Length = 264
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 106/268 (39%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D+ P I DSG+GGL V+++M +PE I++ D PYG +++
Sbjct: 1 MDSRP--------IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K + VIACNTA + E++ + LG + P A T G
Sbjct: 53 FTWQMVNFLLTK-NVKMIVIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNLG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ I+ TP T++ I + + ++ VE ++ KK +
Sbjct: 111 KVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESN----QMSSSLAKKVVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D ++L CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 ETLSPLVGK-LDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINH 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ H + + P Q
Sbjct: 226 NWQNKHGGHHFYTTASPKGFKEIAEQWL 253
>gi|259508024|ref|ZP_05750924.1| glutamate racemase [Corynebacterium efficiens YS-314]
gi|29839541|sp|Q8FMU6|MURI_COREF RecName: Full=Glutamate racemase
gi|259164365|gb|EEW48919.1| glutamate racemase [Corynebacterium efficiens YS-314]
Length = 273
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 57/269 (21%), Positives = 112/269 (41%), Gaps = 10/269 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ P I IFDSG+GGL V + + +P IY+ D PYG +++
Sbjct: 1 MIERPIP-GADAPIGIFDSGVGGLTVARTIIDQLPHESIIYIGDTANGPYGPLPIARVRE 59
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + +++++ + VIACNTA + R + +PA+++A A T++G
Sbjct: 60 HALRIADELVERG-CKMIVIACNTASAAFLRDARERYDVPVVEVILPAVRRAVAATRNGK 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ ++ T T+ +L + +H + VE + +I EG
Sbjct: 119 VGVIGTVGTINSGAYQDLFAA-SPSIEVHAAACPRFVDFVERGITSGR----QILNIAEG 173
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ + D +VL CTHYPL+ V + V + +++ A+ +L + +
Sbjct: 174 YLEPLQAQGVDTLVLGCTHYPLLSGVIQLAMGDHVTLVSSAEETAKDVLRILSQNDLLAD 233
Query: 243 ---RVFDDHALFLSGKPDIAMRRLMQGFG 268
++ +G P++ + + G
Sbjct: 234 PTMHPTPTYSFESTGDPELFSQLSRRFLG 262
>gi|315652855|ref|ZP_07905828.1| glutamate racemase [Eubacterium saburreum DSM 3986]
gi|315484886|gb|EFU75295.1| glutamate racemase [Eubacterium saburreum DSM 3986]
Length = 269
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 7/250 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L I +FDSG+GGL V +++ MP +Y D PYG+ + K + + +
Sbjct: 4 LNLPIGVFDSGVGGLTVAREIISQMPNEGIVYFGDTARVPYGSKSKDTVIKYSRQIVNFL 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130
K VIACNTA D L++ ++ +G + A A T+ G I ++ T
Sbjct: 64 QTK-NVKAIVIACNTASAFALDILKTEI-NIPIIGVIHAGAITATKTTKVGRIGVVGTNG 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ IH S+ + + +L VEE + ++ I + + E + +
Sbjct: 122 TISSGIYEKTIHEINSELEVIQKACPLLVPLVEEGLINDSVTDEIISRYV----SELKSR 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYPL+ + FR++ V ++ + A+ + LL R N H
Sbjct: 178 HIDSLVLGCTHYPLLYNTFRRIMGEGVSLVNPAYETAKELKSLLIRENLCAGDGEVFHEF 237
Query: 251 FLSGKPDIAM 260
++S +
Sbjct: 238 YVSDMAERFS 247
>gi|253698914|ref|YP_003020103.1| glutamate racemase [Geobacter sp. M21]
gi|251773764|gb|ACT16345.1| glutamate racemase [Geobacter sp. M21]
Length = 278
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + +L+
Sbjct: 4 KAIGIFDSGVGGLTVLKEVVRALPQEDTIYLGDTARVPYGTKSPETVVRYSRQIARYLLN 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA + L+ F P + AAA T+SG + ++ T AT+
Sbjct: 64 R-DIKLLVVACNTASAVALSALQQEFSIPIVGVIEPGARAAAAATKSGKVGVIGTAATVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG-CFIEKEGKRT 192
+ + I + + + EE ++E+ + G + +
Sbjct: 123 SSAYTKAIKRINPDIEVVNRACPLFVPLAEEGWV-----DNEVARLTAGIYLEDLKKHGV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251
D +VL CTHYP++ V ++ V +D+++ A +L + + +H +
Sbjct: 178 DTLVLGCTHYPILKDVIAEVMGPEVTLVDSAEQTALTVAGILGEQGLLRPKGERGNHHYY 237
Query: 252 LSGKPDIAMRRLMQGFG 268
++ P +R + G
Sbjct: 238 VTDIPAGFIRVGNRFLG 254
>gi|297618209|ref|YP_003703368.1| glutamate racemase [Syntrophothermus lipocalidus DSM 12680]
gi|297146046|gb|ADI02803.1| glutamate racemase [Syntrophothermus lipocalidus DSM 12680]
Length = 273
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 6/249 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL V++++ +P + IY+ D PYG L RL D L
Sbjct: 5 QPVGVFDSGVGGLTVVKEIIKRLPCENIIYIGDTANVPYGGKPPQELI-RLGKNIIDFLI 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
V ACNT+ ++ LR P VP AAA T++G + +++T AT++
Sbjct: 64 NQGAKAVVAACNTSSSVSIPILRDMCPVPVIDVIVPGAANAAAVTRNGRVGVIATEATVK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I + ++ V+ VE+ ++ DE+++ + D
Sbjct: 124 TGAYTRHIKALSPGISVYEVACPRFVPLVEQGV----LEGDEVEEVANEYLQPLRRQGID 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTHQTRVFDDHALFL 252
+V+ CTHYP ++ V +++ V +D ++ A R R LL R + + F
Sbjct: 180 TLVIGCTHYPFLIPVIQKVMGKGVRLVDPAEETASRLRATLLERGLDNPGTTSPQYRFFA 239
Query: 253 SGKPDIAMR 261
+G + R
Sbjct: 240 TGSSESFFR 248
>gi|307243173|ref|ZP_07525346.1| glutamate racemase [Peptostreptococcus stomatis DSM 17678]
gi|306493434|gb|EFM65414.1| glutamate racemase [Peptostreptococcus stomatis DSM 17678]
Length = 270
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 16/267 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN +I +FDSG+GGL VL+++ +P IY D PYG+ + K
Sbjct: 1 MDNR--------AIGVFDSGLGGLTVLKEINKYLPNEDTIYFGDTARVPYGSRSKETIIK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSG 121
+ L VIACNTA E R + + +G + A + A T++
Sbjct: 53 YTFQAIN-FLASQNVKAIVIACNTASARALLEAREEY-DIPIMGVIEAGARTAVYSTRNK 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++ ++ T AT+R + I + S + + I VEE +I ++
Sbjct: 111 VVGVIGTTATVRSKAYNKAIKAKDSGIRVIGKACPIFVPLVEEGWSNKEISTMAAHMYLD 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
K D +VL CTHYP++ ++ V ++ + A + +L + +
Sbjct: 171 S----LVEKGIDSLVLGCTHYPILKRTIGEVVGKDVKLINPAKETALDLKDVLEKRDMMN 226
Query: 242 -TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ F+S + + +
Sbjct: 227 DSDQKGSCKYFVSDINEQFSKVASEFL 253
>gi|119490901|ref|ZP_01623184.1| glutamate racemase [Lyngbya sp. PCC 8106]
gi|119453719|gb|EAW34878.1| glutamate racemase [Lyngbya sp. PCC 8106]
Length = 284
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 9/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I +FDSG+GGL VL+++ +P +Y D PYG + + + +
Sbjct: 5 KKARKIAVFDSGVGGLTVLRELYQQLPNESILYFGDTARLPYGTRSQSEILQFVREIIIW 64
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+D+ + V+ACNT+ L + ++S F ++ LG + P K A + I +++TP
Sbjct: 65 AIDQ-DVKMIVMACNTSSALALETVQSEF-NVPILGVILPGAKAAVQ--KGRRIGVIATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ I + + VS +E+ +I + + +
Sbjct: 121 ATVTSNAYRQAIQEMDATVQVWQVSCPEFVPLIEQN----RIHDPYTYQVAQEYLAPLLD 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+R D ++ CTHYP + V R L P V +D + + + L + +
Sbjct: 177 QRIDTLIYGCTHYPHLAPVLRSLLPPSVQLVDPAVHLVKAITQELELLGLQNPNLPRPTR 236
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+SG P +Q G
Sbjct: 237 FCVSGCPQQFASVSVQWLGY 256
>gi|260595994|ref|YP_003208565.1| glutamate racemase [Cronobacter turicensis z3032]
gi|260215171|emb|CBA26986.1| Glutamate racemase [Cronobacter turicensis z3032]
Length = 288
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 142/263 (53%), Gaps = 4/263 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + +IL+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ +
Sbjct: 22 PSEARPTILVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIV 81
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + +Y L+VIACN+A T+ LR F + +G VPAIK AA T +G++ +L+T
Sbjct: 82 TAVQARYPLALAVIACNSASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLAT 140
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R YT LI + ++C I ++ S L E G + + +++ + E
Sbjct: 141 RGTVKRPYTHELIARFANECQIEMLGSAELVEIAEAKLHGEPVSLEALRRVLRPWLRMPE 200
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+PL+ Q+ P +D+ +IARR LL ++
Sbjct: 201 P--PDTVVLGCTHFPLLADELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDACSFDENI 258
Query: 249 ALFLSGKPDIA-MRRLMQGFGLK 270
A ++ P++A + ++Q +G
Sbjct: 259 AYCMALTPEVAQLMSVLQRYGFN 281
>gi|172037379|ref|YP_001803880.1| glutamate racemase [Cyanothece sp. ATCC 51142]
gi|171698833|gb|ACB51814.1| glutamate racemase [Cyanothece sp. ATCC 51142]
Length = 281
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 9/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++ +P+ +Y AD PYGN E + + + + +
Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGNREASEILQFVREILVWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + ++ACNT+ L + +R F + LG + P K A Q I ++STPAT
Sbjct: 65 TQQNVKMVIMACNTSSALALEAVRQEF-DVPILGVILPGAKAAVK--QGKRIGVISTPAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + V +E+ +I + K+ +
Sbjct: 122 AKSQAYRQAIQEINPEAQVWQVGCPQFVPLIEQN----RIWDVYTKQVAQEYLSPLLAHD 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++ CTHY + + + + P + +D + + + A+ L + +T
Sbjct: 178 IDTLIYGCTHYRHLEALIKTIIPPTIKLIDPASYVVQAAKKELELMGLSKTASASPTRFA 237
Query: 252 LSGKPDIAMRRLMQGFGL 269
+SG D R Q G
Sbjct: 238 VSGCSDTFSRLSQQWLGY 255
>gi|147677257|ref|YP_001211472.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
gi|146273354|dbj|BAF59103.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
Length = 265
Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I FDSG+GGL V+++ R L+P FIY AD PYG+ L+KR + +L+
Sbjct: 5 GPIGFFDSGVGGLSVMKEARALLPSEDFIYFADSAYCPYGDKPPEVLRKRAFAICDFLLE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNT D++R + S+ +G PA+K A + T++G I +L+T TL
Sbjct: 65 RG-TRLIVIACNTISIAALDDVR-RYVSVPVVGIEPAVKPAVSATRNGKIGVLATGVTLA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ Y ++ L VE + E EI +E + D
Sbjct: 123 GERFNALVRRYGRGIEVYTQPCPGLVELVESG--NWERPEAEIM--LERYLGPLLARGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFL 252
+VL CTHYP + + +L+ V +D ++AR+ + +L + F
Sbjct: 179 TVVLGCTHYPFLRPLVEKLAGGGVTVIDTGRAVARQIKNVLEASGLASGKTAPGTERFFT 238
Query: 253 SGKPDIAMRRLMQGFG 268
S +P++ + +G
Sbjct: 239 SARPEVVEPVVRALWG 254
>gi|17227590|ref|NP_484138.1| glutamate racemase [Nostoc sp. PCC 7120]
gi|11386941|sp|Q9L870|MURI_ANASP RecName: Full=Glutamate racemase
gi|6969397|gb|AAF33755.1|AF216288_2 putative glutamate racemase [Nostoc sp. PCC 7120]
gi|17135072|dbj|BAB77618.1| glutamate racemase [Nostoc sp. PCC 7120]
Length = 292
Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 102/263 (38%), Gaps = 9/263 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ + I +FDSG+GGL VL+++ +P IY D PYG + + +
Sbjct: 16 AQEPQRAPIGVFDSGVGGLTVLRQIYRQLPNESVIYFGDTARLPYGIRSQAEILTFVRDI 75
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
D + + + V+ACNT+ L D +R + LG + P K A Q I ++
Sbjct: 76 L-DWMQQQHVKMVVMACNTSSALALDIVREEY-DFPILGVILPGAKAAVQ--QGKRIGVI 131
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
STPAT + I + V +E+ +I++ +
Sbjct: 132 STPATAKSNAYRQAIWEIDPNVEVWQVGCPEFVPLIEQN----RIQDPYTTEVARAYLEP 187
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D +V CTHYPL+ V R L P V +D + + L + T
Sbjct: 188 LIQQDIDTLVYGCTHYPLLAPVLRSLLPPQVKIIDPAVHVVTACTQELDLLGLSNTHPPL 247
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
+SG P + + G
Sbjct: 248 PTRFAVSGCPQQFSQSGVHWLGY 270
>gi|257058497|ref|YP_003136385.1| glutamate racemase [Cyanothece sp. PCC 8802]
gi|256588663|gb|ACU99549.1| glutamate racemase [Cyanothece sp. PCC 8802]
Length = 281
Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 9/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++ +P+ +Y AD PYGN + + + + +
Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESMLYFADTARLPYGNRSGAEILQYVREILVWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + ++ACNT+ L D +RS F + LG + P + A Q I ++STPAT
Sbjct: 65 SQQNVKMVIMACNTSSALALDIVRSEF-NFPILGVILPGARAAVK--QGQRIGVISTPAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + V +E +I + K+ +
Sbjct: 122 AKSNAYRQAIQEINPKAQVWQVGCPEFVPLIEAN----RIHDPYTKQVAWKYLAPLLAQN 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +V CTHY + +F+++ P V+ +D ++ + A+ L +
Sbjct: 178 IDTLVYGCTHYRHLSPIFQEIIPPTVNLIDPANFVVAAAKKELELMGLRHNEPPRPTRFA 237
Query: 252 LSGKPDIAMRRLMQGFGL 269
+SG P + Q G
Sbjct: 238 VSGCPQTFSQISQQWLGY 255
>gi|326803296|ref|YP_004321114.1| glutamate racemase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650395|gb|AEA00578.1| glutamate racemase [Aerococcus urinae ACS-120-V-Col10a]
Length = 273
Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 110/260 (42%), Gaps = 10/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I DSG+GGL V+++ +P IY+ D+ PYG + + + L +
Sbjct: 1 MKRPIGFLDSGVGGLTVVKEAMRQLPNESIIYIGDNARCPYGPRPEAEINEFTQELVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L++ + VIACNTA + + +R ++ +G + P + A Y+++G I IL+T A
Sbjct: 61 LEQ-NIKMLVIACNTATAVSLERIRQRV-NIPVIGVIHPGARAANRYSENGHIGILATEA 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + N++ + ++ + VE I KK + + +
Sbjct: 119 TINSHFYQNVLLDHNKHLILYPLVCSKFVPLVESGQYSSPIA----KKIVAESLYDLKQT 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--- 247
D ++L CTHYPL+ + ++ V +++ +L N ++ +
Sbjct: 175 AIDTLILGCTHYPLLAPLIQKFMGPGVRLVNSGAETVSDVSAILDLYNLAESSWNPEAAT 234
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + +G +
Sbjct: 235 YQFYTTGGVTMFKDIAKTWL 254
>gi|258451847|ref|ZP_05699868.1| glutamate racemase [Staphylococcus aureus A5948]
gi|257860455|gb|EEV83282.1| glutamate racemase [Staphylococcus aureus A5948]
Length = 266
Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 102/261 (39%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ + I
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWCNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G P + + L
Sbjct: 236 FFATGDPTHITNIIKEWLNLS 256
>gi|312958853|ref|ZP_07773372.1| Glutamate racemase [Pseudomonas fluorescens WH6]
gi|311286623|gb|EFQ65185.1| Glutamate racemase [Pseudomonas fluorescens WH6]
Length = 264
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 5/243 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG+ VL +++ L+P +YVAD PYG + +R +
Sbjct: 4 DAPIGVFDSGVGGVSVLDEIQRLLPHESLLYVADGGHIPYGEKTPAFILERSRRVAEFFR 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K VIACNTA +LR FP +G PA+K AAA T++G++ +L+T TL
Sbjct: 64 EKGA-KAFVIACNTATVAAVADLRQDFPDWPLVGMEPAVKPAAAATRAGVVGVLATTGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + ++ ++G
Sbjct: 123 QSAKFAALLDRFATDVRVITQPCPGLVELIETG----DLTSPALRTLLQGYIDPLLSAGC 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + Q+ P + +D ++AR+ + LL + +
Sbjct: 179 DTIILGCTHYPFLKPLLAQMLPSSITLIDTGAAVARQLKRLLGERDLLAVANPAPAQFWT 238
Query: 253 SGK 255
SG
Sbjct: 239 SGD 241
>gi|330861644|emb|CBX71822.1| glutamate racemase [Yersinia enterocolitica W22703]
Length = 287
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 88/271 (32%), Positives = 142/271 (52%), Gaps = 9/271 (3%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
K D P L IFDSG+GGL V Q++R L+P+ H+IY D+V FPYG +
Sbjct: 19 KADTAPRPTAL-----IFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIV 73
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+R++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G
Sbjct: 74 ERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNG 132
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++ +L+T T+ +YT +LI + + C I L+ S L E G + ++ +KK +
Sbjct: 133 VVGLLATRGTVHASYTQDLIERFATDCKIELLGSSELVELAETKLHGGVVPKEALKKILH 192
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+E D IVL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 193 PWLAMREP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENMI 250
Query: 242 TRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+ ++ A ++ D A+ ++QG+G S
Sbjct: 251 SSDEENIAYCMALNADTDALLPVLQGYGFPS 281
>gi|218291114|ref|ZP_03495129.1| glutamate racemase [Alicyclobacillus acidocaldarius LAA1]
gi|218238925|gb|EED06133.1| glutamate racemase [Alicyclobacillus acidocaldarius LAA1]
Length = 281
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSGIGGL V M+ +P +Y D PYG+ + +++ + +
Sbjct: 4 AHRPIGVFDSGIGGLTVFHAMKRRLPHESMVYFGDRARCPYGDRDPQEVERFALEI-GRY 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ L V+ACNTA + L+ P QA +++G I ++ T T
Sbjct: 63 LECLGIKLLVVACNTATAVALPRLKEELGIEVVGVIEPGASQAIEASETGRIGVIGTSVT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ ++ + + + V+ + VE+ ++ D ++ + +R
Sbjct: 123 VSSHAYADALRALRPDVSVIEVACPLFVPLVEQG----HVEGDAVEAVVHESLQPLLQER 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D +VL CTHYPL++ V R++ + + ++D+ A+R LL D
Sbjct: 179 IDTLVLGCTHYPLLMPVIRRVLGPAIRVISSADATAQRVARLLAERGLEAPDDHVPDACF 238
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G L FG
Sbjct: 239 LTTGDTTSLRMALATWFG 256
>gi|239782122|pdb|3HFR|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes
gi|239782123|pdb|3HFR|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes
gi|259090342|pdb|3IST|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Succinic Acid
gi|259090343|pdb|3IST|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Succinic Acid
gi|259090345|pdb|3ISV|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Acetate Ion
gi|259090346|pdb|3ISV|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Acetate Ion
Length = 269
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V++++ +P Y+ D PYG + + K + ++
Sbjct: 5 KQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEXTNFLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
D+ L VIACNTA ++R + +G + P + A T++ I +L T T
Sbjct: 65 DRGIKXL-VIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLGT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ S VE + K KK + + + +
Sbjct: 123 VESXAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLPLKSTK 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHAL 250
D ++L CTHYPL+ + V +++ + A LL N + +H
Sbjct: 179 IDTVILGCTHYPLLKPIIENFXGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRF 238
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 239 FTTGSTQIFKDIAKDWL 255
>gi|312876812|ref|ZP_07736790.1| glutamate racemase [Caldicellulosiruptor lactoaceticus 6A]
gi|311796431|gb|EFR12782.1| glutamate racemase [Caldicellulosiruptor lactoaceticus 6A]
Length = 267
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 6/242 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K + V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKRIGVIGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VEE ++ K+ +E E K D
Sbjct: 123 SGAFEKKILELDSSLQVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFNEKEID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+V+ CTHYP + V +++ P V ++ + A++ LL + + + F +
Sbjct: 179 TLVMGCTHYPFLQDVIKKVLP-DVMLINPALETAKQVFELLKENDMLNSSSEEPTYYFYA 237
Query: 254 GK 255
Sbjct: 238 SD 239
>gi|296118692|ref|ZP_06837268.1| glutamate racemase [Corynebacterium ammoniagenes DSM 20306]
gi|295968181|gb|EFG81430.1| glutamate racemase [Corynebacterium ammoniagenes DSM 20306]
Length = 265
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 10/260 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P+ IYV D PYG E ++ + D++
Sbjct: 5 APIGIFDSGVGGLTVARTIMEQLPQESIIYVGDTAHAPYGPRELEDVQNLSRAIADDLVA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNTA DE R + PA+++A A T++ + ++ T T+
Sbjct: 65 RG-CKMLVIACNTATAAFLDEARQRYDIPVVEVIRPAVRRALATTRNHKVGVIGTEGTIN 123
Query: 134 RTYTSNLI----HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+L + H V+ VE + +I E +
Sbjct: 124 SQAYQHLFVQANDAETPNVEAHAVACPDFVPFVERGITSGR----QILGVAEAYLAPLQA 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTHYPL+ + + V + +++ A+ +L + +
Sbjct: 180 AGVDTLVLGCTHYPLLTGIIQLAMGDNVTLVSSAEETAKDVLRILTERDELAPVDNEPTR 239
Query: 250 LF-LSGKPDIAMRRLMQGFG 268
LF +G P+ R + G
Sbjct: 240 LFESTGDPETFARLAQRFLG 259
>gi|15673264|ref|NP_267438.1| glutamate racemase [Lactococcus lactis subsp. lactis Il1403]
gi|13878595|sp|Q9CG28|MURI_LACLA RecName: Full=Glutamate racemase
gi|12724258|gb|AAK05380.1|AE006360_9 glutamate racemase [Lactococcus lactis subsp. lactis Il1403]
Length = 271
Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 17/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V +++ +P +Y+ D PYG +
Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K + V+ACNTA + + ++ + +G + P A T++
Sbjct: 53 FTWDMVNFLLSK-DVKMIVMACNTATAMALEIVKEKL-DIPVIGVILPGASSAIQKTKTN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T A++R I S ++ ++ S VE +++ + +K +
Sbjct: 111 KIGVIATQASIRSDEYHKTIARKSSAVEVYSLACPKFVSIVESN----EMESEIARKVVS 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH- 240
+ GK D ++L CTHYPL+ + ++ V +D+ R LL + +
Sbjct: 167 ESLVPLIGK-VDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLLNYFSING 225
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGL 269
Q R +H + + + + +
Sbjct: 226 QERQPLEHRFYTTAGVNSFREIAEKWLNI 254
>gi|94989807|ref|YP_597907.1| glutamate racemase [Streptococcus pyogenes MGAS10270]
gi|166231059|sp|Q1JIG0|MURI_STRPD RecName: Full=Glutamate racemase
gi|94543315|gb|ABF33363.1| Glutamate racemase [Streptococcus pyogenes MGAS10270]
Length = 264
Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 10/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + +L
Sbjct: 4 RAIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLT 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ + V ACNTA + +E+++ + LG + P A T G + ++ TP T+
Sbjct: 64 Q-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + ++ VE ++ KK + GK
Sbjct: 122 ASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-I 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INTHQTRVFDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL IN + + +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVEHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F + P+I
Sbjct: 237 FTTANPEIFQEIASIWL 253
>gi|305680741|ref|ZP_07403548.1| glutamate racemase [Corynebacterium matruchotii ATCC 14266]
gi|305658946|gb|EFM48446.1| glutamate racemase [Corynebacterium matruchotii ATCC 14266]
Length = 288
Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 14/269 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKI N + I IFDSG+GGL V + + +P Y+ D PYG +
Sbjct: 21 MKITN-------NSPIGIFDSGVGGLTVARTIMEQLPGESITYIGDTAHSPYGPLPIAEV 73
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K + + +++++ +L VIACNTA + R + PA+++A A T++
Sbjct: 74 RKHALRIADELVERGSKML-VIACNTASAACLRDARERYDVPVIEVIHPAVRRAVATTRN 132
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G I ++ T T+ +L S I + VE + +I
Sbjct: 133 GRIGVIGTSGTINSGAYQDLF-SVNPNVEITAQACPRFVDFVERGITSGR----QILGVA 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTHYPL+ V + V + +++ A+ L +
Sbjct: 188 QAYIEPLQTAGVDTLVLGCTHYPLLSGVIQLAIGDNVTLVSSAEETAKDVLKQLSTTDML 247
Query: 241 QTR-VFDDHALFLSGKPDIAMRRLMQGFG 268
H +G P++ + + G
Sbjct: 248 ADESTTPTHHFESTGDPELFSQLAKRFLG 276
>gi|251796096|ref|YP_003010827.1| glutamate racemase [Paenibacillus sp. JDR-2]
gi|247543722|gb|ACT00741.1| glutamate racemase [Paenibacillus sp. JDR-2]
Length = 271
Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I I DSG+GGL V +++ +P +Y D PYG + + + + ++
Sbjct: 4 QQPIAILDSGVGGLTVAREVMRQLPREKIVYFGDTARAPYGPRDPKIVTRFTREIVDYLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+++P + VIACNTA +E+R+ + +G + P + A T +G I ++ T T
Sbjct: 64 -QFRPKMIVIACNTATAFALEEIRAIV-DIPVVGVIKPGARAALGRTITGCIGVIGTEGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + H+ + + VE+ + + + I
Sbjct: 122 IKSGAYEHALLEISPDVHVISEACPLFVPLVEKG----NFRSLQTYETIRSSIGHLRKFP 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D ++L CTHYP + V +++ ++ + ++D AR +L + + H
Sbjct: 178 MDSLILGCTHYPFLADVIQEVVGPDINLISSADETAREVSDILQDQGMLSRGEILPVHQF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
F SG+P + Q G
Sbjct: 238 FCSGEPQMFKSIAQQWLG 255
>gi|323489950|ref|ZP_08095171.1| glutamate racemase [Planococcus donghaensis MPA1U2]
gi|323396246|gb|EGA89071.1| glutamate racemase [Planococcus donghaensis MPA1U2]
Length = 267
Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ L+P Y+ D+ PYG ++ + + +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIMKLLPNEQICYIGDNARCPYGPRPLAEVRTYTWQMANAL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ K + VIACNTA L+ P + +G + P + A + + I++L T
Sbjct: 61 MKK-NIKMLVIACNTATAAALYSLQKNLP-IPVIGVIFPGARAAVKSSTTNKIAVLGTSG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S VS H+ ++ VE + + ++ +
Sbjct: 119 TVKSGAYEKAVLSLVSSAHVIQLACPRFVPLVESDEYEGEFAH----RIVQETLATIAYE 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HA 249
D +L CTHYPL+ ++ V L +++ A+ L N R H
Sbjct: 175 EFDTAILGCTHYPLLQGFIEEVLGDTVHVLSSAEETAKDVERYLHYKNQFANREKPPVHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ SG I + +
Sbjct: 235 FYTSGSTQIFSSIVRKWL 252
>gi|153811627|ref|ZP_01964295.1| hypothetical protein RUMOBE_02019 [Ruminococcus obeum ATCC 29174]
gi|149832368|gb|EDM87453.1| hypothetical protein RUMOBE_02019 [Ruminococcus obeum ATCC 29174]
Length = 273
Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 17/265 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKID I +FDSG+GGL V +++ +P +Y D PYG+ +
Sbjct: 1 MKID-------RDAPIGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSRDTV 53
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQ 119
+ + L + Q VIACNTA D ++ + LG + A K AA T
Sbjct: 54 IRYSRQIIH-FLKEQQAKAIVIACNTASAFALDAVQHE-QDIPVLGVIGAGAKVAAEETV 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + ++ T T+ + + + + + VEE + + +
Sbjct: 112 NKRVGVIGTVGTVGSGIHEAYLKKLDPEITVIGKACPLFVPLVEEGW----LHDPVTVEV 167
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
E + K D ++L CTHYPLI R++ V ++ + A + LL + N
Sbjct: 168 ANRYLQELKDKDVDTLILGCTHYPLIRSTIREVMGEKVRLVNPAYETALELKNLLQKTNM 227
Query: 240 HQTRVFDD---HALFLSGKPDIAMR 261
T ++ + ++S D
Sbjct: 228 LSTGQQEEEFPYRFYVSDLADEFKE 252
>gi|258511815|ref|YP_003185249.1| glutamate racemase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478541|gb|ACV58860.1| glutamate racemase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 281
Score = 299 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSGIGGL V M+ +P +Y D PYG+ + +++ + +
Sbjct: 4 AHRPIGVFDSGIGGLTVFHAMKRRLPHESMVYFGDRARCPYGDRDPDEVERFALEI-GRY 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ L V+ACNTA + L+ P QA +++G I ++ T T
Sbjct: 63 LERLGIKLLVVACNTATAVALPRLKQELGIDVVGVIEPGASQAIEASETGRIGVIGTSVT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + V+ + VE+ ++ D ++ + R
Sbjct: 123 VSSHAYAEALRVLRPDVSVVEVACPLFVPLVEQG----HVEGDAVEAVVRESLQPLLEAR 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTHYPL++ V R++ + + ++D+ A R +L D
Sbjct: 179 IDTLVLGCTHYPLLMPVIRRVLGPSIRVISSADATAERVARVLAERGLEAPDHREPDACF 238
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G L FG
Sbjct: 239 LTTGDTASLRMALATWFG 256
>gi|83589382|ref|YP_429391.1| glutamate racemase [Moorella thermoacetica ATCC 39073]
gi|83572296|gb|ABC18848.1| glutamate racemase [Moorella thermoacetica ATCC 39073]
Length = 276
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 8/248 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL V +++ +P IY D PYG+ L + ++
Sbjct: 5 QPVGVFDSGVGGLTVAREITRQLPAETIIYFGDTAHVPYGSRPVDELIHFADTIVGFLIA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ V ACNT + L+ + S+ +G + P ++ A T++G I +++T AT+
Sbjct: 65 RGA-KAIVDACNTTSAVALPYLQQKY-SIPIIGVIEPGVEAALQATKNGRIGVIATEATI 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ S + + + VE + ++ + C
Sbjct: 123 ASDAHRRALLSRGKEVQVFTRACPPFVPLVEAGI----VAGPRVEGVVAECLESLLQAGI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251
D ++L CTHYP + V + L+ V +D + + R + +L + H +
Sbjct: 179 DTLILGCTHYPFLAPVIQDLAGPGVTLVDPAAATVRELKSVLAAGGGLRGPHGSRAHEFY 238
Query: 252 LSGKPDIA 259
+SG P
Sbjct: 239 VSGDPRSF 246
>gi|94993693|ref|YP_601791.1| glutamate racemase [Streptococcus pyogenes MGAS10750]
gi|306827957|ref|ZP_07461224.1| glutamate racemase [Streptococcus pyogenes ATCC 10782]
gi|166231060|sp|Q1J8B4|MURI_STRPF RecName: Full=Glutamate racemase
gi|94547201|gb|ABF37247.1| Glutamate racemase [Streptococcus pyogenes MGAS10750]
gi|304429876|gb|EFM32918.1| glutamate racemase [Streptococcus pyogenes ATCC 10782]
Length = 264
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 104/268 (38%), Gaps = 18/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D P I DSG+GGL V+ ++ +P +Y+ D PYG +K+
Sbjct: 1 MDTRP--------IGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L + +L + + V ACNTA + +E+++ + LG V P A T G
Sbjct: 53 YTWELVNFLLTQ-NVKMIVFACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ TP T+ I + ++ VE ++ KK +
Sbjct: 111 QVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVY 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D +VL CTHYPL+ + + + V +D+ R LL IN
Sbjct: 167 DSLAPLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDING 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +H F + +I
Sbjct: 226 NYHQKAVEHRFFTTANSEIFQEIASIWL 253
>gi|302872434|ref|YP_003841070.1| glutamate racemase [Caldicellulosiruptor obsidiansis OB47]
gi|302575293|gb|ADL43084.1| glutamate racemase [Caldicellulosiruptor obsidiansis OB47]
Length = 267
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 6/242 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP + +Y D PYG+ + K M +L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNENIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K + V+ACNTA + L+ +F P K A T++ + ++ T T+
Sbjct: 64 K-NVKIVVVACNTASAYAYETLKKSFDIPIVAVIEPGAKAAVNATKNKRVGVVGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VEE ++ K+ +E E K D
Sbjct: 123 SGSFEKKILELDSSIKVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFSEKEID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + V +++ P V ++ + A++ +L + + F +
Sbjct: 179 TLVLGCTHYPFLQDVIKKVLP-DVMLINPALETAKQVFEVLKENDMLNNSSEEPTYYFYA 237
Query: 254 GK 255
Sbjct: 238 SD 239
>gi|224476259|ref|YP_002633865.1| glutamate racemase [Staphylococcus carnosus subsp. carnosus TM300]
gi|254766124|sp|B9DPT7|MURI_STACT RecName: Full=Glutamate racemase
gi|222420866|emb|CAL27680.1| putative glutamate racemase [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 266
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 103/258 (39%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG E ++K + L +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDSARCPYGPREGDEVRKFTVQLAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + D L+ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALDTLKELLP-IPVIGVIEPGSRTAIMTTKNNNVMVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I + + V+ VE+ + + + I
Sbjct: 119 TIKSEAYTKHIKAINPHVDVTGVACPDFVPLVEQMRYHDPVPTNIV---IHQTLKNYRTN 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
+ D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 176 KADTVILGCTHYPLLFEPLHDYFGGSKTVISSGLETAREVSALLTFSNEHAPYTPNTKHR 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G + + Q
Sbjct: 236 FFATGDTEHIEYIISQWL 253
>gi|184200646|ref|YP_001854853.1| glutamate racemase [Kocuria rhizophila DC2201]
gi|183580876|dbj|BAG29347.1| glutamate racemase [Kocuria rhizophila DC2201]
Length = 297
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 13/267 (4%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P + I +FDSG+GGL V + + +P +YV D PYG ++ +
Sbjct: 8 RPGP-NPNSPIGVFDSGVGGLTVARSIIDQLPNEEILYVGDTANGPYGPLPIAQVRSNAL 66
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSG 121
+ D++D L VIACNTA + + R + S+ + PA+++A A T+SG
Sbjct: 67 RIMDDLVDSG-VKLLVIACNTASAAVLRDARERYTRGYSIPVTEVIQPAVRRAVATTRSG 125
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ T AT+ ++ + Q I V+ VE E+ +
Sbjct: 126 RVGVIGTEATIGSRAYNDTFAA-APQLEITSVACPAFVEYVERGVTSGP----ELLSTAQ 180
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTH 240
+ + D +VL CTHYPL+ V + V+ + +++ AR R LL
Sbjct: 181 EYLQPLKDAQVDTLVLGCTHYPLLTAVISYVMGESVNLVSSAEETARDVYRSLLDNGLER 240
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ H +G P + L Q F
Sbjct: 241 DPSLAPHHEFLATGDP-ASFEVLAQRF 266
>gi|126701188|ref|YP_001090085.1| glutamate racemase [Clostridium difficile 630]
gi|254977188|ref|ZP_05273660.1| glutamate racemase [Clostridium difficile QCD-66c26]
gi|255094517|ref|ZP_05323995.1| glutamate racemase [Clostridium difficile CIP 107932]
gi|255102774|ref|ZP_05331751.1| glutamate racemase [Clostridium difficile QCD-63q42]
gi|255308595|ref|ZP_05352766.1| glutamate racemase [Clostridium difficile ATCC 43255]
gi|255316269|ref|ZP_05357852.1| glutamate racemase [Clostridium difficile QCD-76w55]
gi|255518930|ref|ZP_05386606.1| glutamate racemase [Clostridium difficile QCD-97b34]
gi|255652109|ref|ZP_05399011.1| glutamate racemase [Clostridium difficile QCD-37x79]
gi|260685082|ref|YP_003216367.1| glutamate racemase [Clostridium difficile CD196]
gi|260688740|ref|YP_003219874.1| glutamate racemase [Clostridium difficile R20291]
gi|306521843|ref|ZP_07408190.1| glutamate racemase [Clostridium difficile QCD-32g58]
gi|115252625|emb|CAJ70468.1| Glutamate racemase [Clostridium difficile]
gi|260211245|emb|CBA66775.1| glutamate racemase [Clostridium difficile CD196]
gi|260214757|emb|CBE07455.1| glutamate racemase [Clostridium difficile R20291]
Length = 268
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+++ ++P IY D PYG+ + K + L
Sbjct: 3 NKPIGVFDSGLGGLTVLKEIMKILPNEDIIYFGDTARIPYGSRSKETIIKYTFQAIN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
VIACNTA E + + + +G + A + A + T++ ++ I+ T T
Sbjct: 62 KTKGVKAIVIACNTATARSLKEAQEKY-DIPIIGVIEAGARTAVSSTKNKIVGIIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I I + + VEE ++ + K ++ E + K
Sbjct: 121 ISSKAYNLEISKIDESIEIVNKACPLFVPIVEEGWANTEVAKLTAKIYLQ----ELKEKN 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D +VL CTHYP++ + + ++ + A+ + +L N + T + +
Sbjct: 177 IDSLVLGCTHYPILKRTIGEEVGEHIKLVNPAKETAKDLKKILEVQNIINNTEIHGTYQY 236
Query: 251 FLSGKPDIAMRRLMQGF 267
++S P+ +
Sbjct: 237 YVSDIPEKFSDIAREFL 253
>gi|4996220|dbj|BAA78374.1| D-glutamate racemase [Corynebacterium glutamicum]
Length = 284
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 112/270 (41%), Gaps = 10/270 (3%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ P I IFDSG+GGL V + + +P IY+ D PYG ++
Sbjct: 11 SMIERPVP-GADAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVR 69
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+ + + +++++ + VIACNTA + R + +PA+++A A T++G
Sbjct: 70 EHAIRIADELVERG-CKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNG 128
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ T T+ +L + ++ V+ VE + +I +
Sbjct: 129 KVGVIGTVGTINSGAYQDLFSA-SPSIEVNAVACPRFVDFVERGITSGR----QILNIAQ 183
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + D +VL CTHYPL+ V + V + +++ A+ +L + +
Sbjct: 184 DYLEPLQAEGVDTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLA 243
Query: 242 T---RVFDDHALFLSGKPDIAMRRLMQGFG 268
++ +G P+I + + G
Sbjct: 244 DPDMHPEPSYSFESTGDPEIFAQLSRRFLG 273
>gi|116750432|ref|YP_847119.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
gi|116750474|ref|YP_847161.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
gi|116699496|gb|ABK18684.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
gi|116699538|gb|ABK18726.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
Length = 275
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 118/270 (43%), Gaps = 8/270 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M D + ++I +FDSGIGGL V++ + +P IY D PYG +
Sbjct: 1 MCHDMNFVKPDSNSAIGVFDSGIGGLTVVRALMERLPFESIIYFGDTARVPYGVKSVDTI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQ 119
K + +L + Q L ++ACNT + ++ + P + L + A A T+
Sbjct: 61 SKFAGEITEFLL-RQQVKLLIVACNTMAAVAREVIVGLSP-VPVLDVIDAGASSAVEATR 118
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + ++ TPAT+ + IH + + I + + VEE + ++
Sbjct: 119 ARYVGVIGTPATINSNAYARAIHRHDAGIRIFSQACPLFVPLVEEGWLDHPVTRLTAREY 178
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + D +VL CTHYPL+ + +++ + +D+++++A R +L ++
Sbjct: 179 LR----PVTTHQIDTLVLGCTHYPLLKPLLQKVVGKDIHLVDSAEAMAERTAAVLTEMDL 234
Query: 240 -HQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+++ D+ F+S P + G
Sbjct: 235 WNRSASPPDYRFFVSDVPLRFQGIGERFLG 264
>gi|49483313|ref|YP_040537.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA252]
gi|257425201|ref|ZP_05601627.1| glutamate racemase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427864|ref|ZP_05604262.1| glutamate racemase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430499|ref|ZP_05606881.1| glutamate racemase [Staphylococcus aureus subsp. aureus 68-397]
gi|257433261|ref|ZP_05609619.1| glutamate racemase [Staphylococcus aureus subsp. aureus E1410]
gi|257436100|ref|ZP_05612147.1| glutamate racemase [Staphylococcus aureus subsp. aureus M876]
gi|258423807|ref|ZP_05686693.1| glutamate racemase [Staphylococcus aureus A9635]
gi|282903699|ref|ZP_06311587.1| glutamate racemase [Staphylococcus aureus subsp. aureus C160]
gi|282905467|ref|ZP_06313322.1| glutamate racemase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908441|ref|ZP_06316272.1| glutamate racemase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910725|ref|ZP_06318528.1| glutamate racemase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282913925|ref|ZP_06321712.1| glutamate racemase [Staphylococcus aureus subsp. aureus M899]
gi|282918848|ref|ZP_06326583.1| glutamate racemase [Staphylococcus aureus subsp. aureus C427]
gi|282923970|ref|ZP_06331646.1| glutamate racemase [Staphylococcus aureus subsp. aureus C101]
gi|283957893|ref|ZP_06375344.1| glutamate racemase [Staphylococcus aureus subsp. aureus A017934/97]
gi|293500960|ref|ZP_06666811.1| glutamate racemase [Staphylococcus aureus subsp. aureus 58-424]
gi|293509917|ref|ZP_06668626.1| glutamate racemase [Staphylococcus aureus subsp. aureus M809]
gi|293526504|ref|ZP_06671189.1| glutamate racemase [Staphylococcus aureus subsp. aureus M1015]
gi|295427637|ref|ZP_06820269.1| glutamate racemase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591408|ref|ZP_06950046.1| glutamate racemase [Staphylococcus aureus subsp. aureus MN8]
gi|56749237|sp|Q6GHT5|MURI_STAAR RecName: Full=Glutamate racemase
gi|49241442|emb|CAG40126.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272177|gb|EEV04309.1| glutamate racemase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257274705|gb|EEV06192.1| glutamate racemase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278627|gb|EEV09246.1| glutamate racemase [Staphylococcus aureus subsp. aureus 68-397]
gi|257281354|gb|EEV11491.1| glutamate racemase [Staphylococcus aureus subsp. aureus E1410]
gi|257284382|gb|EEV14502.1| glutamate racemase [Staphylococcus aureus subsp. aureus M876]
gi|257846039|gb|EEV70067.1| glutamate racemase [Staphylococcus aureus A9635]
gi|282313942|gb|EFB44334.1| glutamate racemase [Staphylococcus aureus subsp. aureus C101]
gi|282316658|gb|EFB47032.1| glutamate racemase [Staphylococcus aureus subsp. aureus C427]
gi|282321993|gb|EFB52317.1| glutamate racemase [Staphylococcus aureus subsp. aureus M899]
gi|282325330|gb|EFB55639.1| glutamate racemase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282328106|gb|EFB58388.1| glutamate racemase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330759|gb|EFB60273.1| glutamate racemase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595317|gb|EFC00281.1| glutamate racemase [Staphylococcus aureus subsp. aureus C160]
gi|283790042|gb|EFC28859.1| glutamate racemase [Staphylococcus aureus subsp. aureus A017934/97]
gi|290920576|gb|EFD97639.1| glutamate racemase [Staphylococcus aureus subsp. aureus M1015]
gi|291095965|gb|EFE26226.1| glutamate racemase [Staphylococcus aureus subsp. aureus 58-424]
gi|291467367|gb|EFF09884.1| glutamate racemase [Staphylococcus aureus subsp. aureus M809]
gi|295127995|gb|EFG57629.1| glutamate racemase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297576294|gb|EFH95010.1| glutamate racemase [Staphylococcus aureus subsp. aureus MN8]
gi|312438474|gb|ADQ77545.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH60]
gi|315193821|gb|EFU24216.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 266
Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ + I
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G + + L
Sbjct: 236 FFATGDTTHITNIIKEWLNLS 256
>gi|242373382|ref|ZP_04818956.1| glutamate racemase [Staphylococcus epidermidis M23864:W1]
gi|242348745|gb|EES40347.1| glutamate racemase [Staphylococcus epidermidis M23864:W1]
Length = 266
Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 98/258 (37%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEEVKQFTTEIAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FNIKMLVIACNTATAVALEHLQKLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +++ V+ VE+ + I +
Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 176 DADTVILGCTHYPLLYKPIYDYFDGTKTVISSGLETAREVSALLTFSNEHASYTEHPKHR 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G + +
Sbjct: 236 FFATGDTTHIENIIAEWL 253
>gi|57866660|ref|YP_188316.1| glutamate racemase [Staphylococcus epidermidis RP62A]
gi|242242450|ref|ZP_04796895.1| glutamate racemase [Staphylococcus epidermidis W23144]
gi|71151977|sp|Q5HQ24|MURI_STAEQ RecName: Full=Glutamate racemase
gi|57637318|gb|AAW54106.1| glutamate racemase [Staphylococcus epidermidis RP62A]
gi|242234100|gb|EES36412.1| glutamate racemase [Staphylococcus epidermidis W23144]
gi|319401537|gb|EFV89747.1| glutamate racemase [Staphylococcus epidermidis FRI909]
Length = 267
Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +KK L +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKKFTTELAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + D L++ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALDYLQNILP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +++ V+ VE+ + + I +
Sbjct: 119 TIKSEAYRTHIKKINPNVNVYSVACPGFVPLVEQMRYKDPTITNIV---IHQTLKQWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D ++L CTHYPL+ + + + AR LL N H + H
Sbjct: 176 DADTVILGCTHYPLLYQPIYEYFSGTKTVISSGLETAREVSALLTFSNEHASYTEHPQHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G + + +K
Sbjct: 236 FFATGDTTHIKNIIDEWLNMK 256
>gi|315658541|ref|ZP_07911413.1| glutamate racemase [Staphylococcus lugdunensis M23590]
gi|315496870|gb|EFU85193.1| glutamate racemase [Staphylococcus lugdunensis M23590]
Length = 269
Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 99/264 (37%), Gaps = 7/264 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I + DSG+GGL V +++ +P Y+ D PYG +K L
Sbjct: 1 MKNMNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDIARCPYGPRPGEEVKAFTTELA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ +++ + + VIACNTA + + L+ S+ +G + P + A T++ + IL
Sbjct: 61 NKLME-FDIKMLVIACNTATAVALEHLQ-HILSIPVIGVIEPGARTAIMTTKNQHVLILG 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + I + V+ VE+ I I
Sbjct: 119 TEGTIKSEAYRHHIKRINPNVEVTGVACPGFVPLVEQMRYNDPTITSII---IHQTLKHW 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
D ++L CTHYPL+ + + AR LL N H +
Sbjct: 176 RNSIADTVILGCTHYPLLYQPLNDYFGGDKTVISSGLETAREVSALLTFSNEHASYTAQP 235
Query: 247 DHALFLSGKPDIAMRRLMQGFGLK 270
H F +G + + +K
Sbjct: 236 QHRFFSTGDTTHITNIIAEWLHMK 259
>gi|75907689|ref|YP_321985.1| glutamate racemase [Anabaena variabilis ATCC 29413]
gi|123610062|sp|Q3MD46|MURI_ANAVT RecName: Full=Glutamate racemase
gi|75701414|gb|ABA21090.1| glutamate racemase [Anabaena variabilis ATCC 29413]
Length = 292
Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats.
Identities = 62/262 (23%), Positives = 102/262 (38%), Gaps = 9/262 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++ + I +FDSG+GGL VL+++ +P IY D PYG + + +
Sbjct: 17 QEPQRAPIGVFDSGVGGLTVLRQIYRQLPNESVIYFGDTARLPYGIRSQAEILTFVRDIL 76
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
D + + + V+ACNT+ L D +R + LG + P K A Q I ++S
Sbjct: 77 -DWMQQQHVKMVVMACNTSSALALDIVREEY-DFPILGVILPGAKAAVQ--QGKRIGVIS 132
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT + I + V +E+ +I++ +
Sbjct: 133 TPATAKSNAYRQAIWEIDPNVEVWQVGCPEFVPLIEQN----RIQDPYTTEVARAYLEPL 188
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +V CTHYPL+ V R L P V +D + + L + T
Sbjct: 189 IQQDIDTLVYGCTHYPLLAPVLRSLLPPQVKIIDPAVHVVTACTQELDILGLSNTHPPLP 248
Query: 248 HALFLSGKPDIAMRRLMQGFGL 269
+SG P + + G
Sbjct: 249 TRFAVSGCPQQFSQSGVNWLGY 270
>gi|319441880|ref|ZP_07991036.1| glutamate racemase [Corynebacterium variabile DSM 44702]
Length = 277
Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + +PE IY+ D PYG+ +++ + D++
Sbjct: 7 NSPIGVFDSGVGGLTVARAIVDQLPEESMIYIGDTANSPYGDKPLAVVRELATAIADDLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D+ + V+ACNTA + R +P +PA+++A + T++G + ++ T AT+
Sbjct: 67 DRG-CKMIVVACNTASAAFLRDARERYPVPIIEVILPAVRRAVSVTRNGRVGVIGTHATI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L + + VE +I E + +
Sbjct: 126 TSGAYQDLFRA-NPNVEVFAQDCPQFVPFVERGIT----TGRQILGLAEAYLEPLKDEGV 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----- 247
D +VL CTHYPL+ V + + V +++++ + L R D
Sbjct: 181 DTLVLGCTHYPLLTGVLQLVMGDDVTLVNSAEETMKTVYRTLNEQGILADRSPGDGAGEQ 240
Query: 248 --HALFLSGKPDIAMRRLMQGFG 268
H +G P + G
Sbjct: 241 PVHTFESTGDPQRFAHLASRFLG 263
>gi|295108801|emb|CBL22754.1| glutamate racemase [Ruminococcus obeum A2-162]
Length = 272
Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 103/255 (40%), Gaps = 10/255 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ +FDSG+GGL V +++ +P +Y D PYG+ + + +
Sbjct: 3 DKNAPVGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKDTVIRYSSQIVH- 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129
L + VIACNTA + ++ + LG + A + AA T++ + ++ T
Sbjct: 62 FLREQNVKAIVIACNTASAFALEAVQDKL-DIPVLGVIEAGARVAAEETKNKRVGVIGTV 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + + + + + + VEE + + + E +
Sbjct: 121 GTVGSGIHESYLKRLDPEITVIGKACPLFVPLVEEGW----LHDPVTVEVASRYLQELKD 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFD 246
++ D ++L CTHYPLI +++ V ++ + A + LL +++ T +
Sbjct: 177 EQVDTLILGCTHYPLIRSTIQEVMGEKVRLVNPAYETALELKSLLTKMDLLSTGEQQAEF 236
Query: 247 DHALFLSGKPDIAMR 261
+ ++S D
Sbjct: 237 PYRFYVSDLADEFKE 251
>gi|307150996|ref|YP_003886380.1| glutamate racemase [Cyanothece sp. PCC 7822]
gi|306981224|gb|ADN13105.1| glutamate racemase [Cyanothece sp. PCC 7822]
Length = 278
Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats.
Identities = 63/258 (24%), Positives = 105/258 (40%), Gaps = 9/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I IFDSG+GGL VL+++ +P +Y AD PYG + + + + D +
Sbjct: 6 RSPIGIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSAGEILEFVREIM-DWM 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
Q + ++ACNT+ L D +R F + LG + P + A + I +++TPAT
Sbjct: 65 TAQQVKMVIMACNTSSALALDAVRDEF-DVPVLGVILPGARAAVQ--KGKRIGVIATPAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I V + V +E+ +I E K+ + +
Sbjct: 122 AASNAYRQAIEEIVPTAQVWQVGCPEFVPLIEQN----RIYEPLTKEVAKQYLKPLLQLK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +V CTHY + +FRQ+ P V +D + + A L +
Sbjct: 178 IDTLVYGCTHYRHLEPLFRQILPSSVRLVDPARYVVSAAEKELELLGLKSNFPSVPTRFC 237
Query: 252 LSGKPDIAMRRLMQGFGL 269
+SG P+ Q G
Sbjct: 238 VSGNPETFAVLSRQWLGY 255
>gi|149924170|ref|ZP_01912547.1| glutamate racemase [Plesiocystis pacifica SIR-1]
gi|149814971|gb|EDM74531.1| glutamate racemase [Plesiocystis pacifica SIR-1]
Length = 276
Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 3/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+ +R +P FIY+ D PYG + + ++
Sbjct: 7 DAPIGVFDSGVGGLTVLRALRRRLPNERFIYLGDTARLPYGTKSPETVARYAEKAAGVLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ L VIACNTA + L F + +G + P A A T+S + ++ T T
Sbjct: 67 ERG-IKLLVIACNTASAVAVSRLAERFAPVPVIGVIEPGAWAACAATRSDRVLVIGTEGT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + V+ + + EE I E ++ + E +R
Sbjct: 126 INGGAYQRAIARRRPAIVVRSVACPLFVALAEEGWVRGPIPEAIARRYLAVELSGNEDER 185
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTH+P++ V +++ V +D++++ A L R + D
Sbjct: 186 VDTLVLGCTHFPVLRGVLQEVCGPEVSLVDSAETTATSVARALEREGLAAGQGGGDSLHF 245
Query: 251 FLSGKPDIAMR 261
+ PD R
Sbjct: 246 LATDAPDRFAR 256
>gi|255657512|ref|ZP_05402921.1| glutamate racemase [Clostridium difficile QCD-23m63]
gi|296452816|ref|ZP_06894503.1| glutamate racemase [Clostridium difficile NAP08]
gi|296879932|ref|ZP_06903904.1| glutamate racemase [Clostridium difficile NAP07]
gi|296258364|gb|EFH05272.1| glutamate racemase [Clostridium difficile NAP08]
gi|296429046|gb|EFH14921.1| glutamate racemase [Clostridium difficile NAP07]
Length = 268
Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+++ ++P IY D PYG+ + K + L
Sbjct: 3 NKPIGVFDSGLGGLTVLKEIMKILPNEDIIYFGDTARIPYGSRSKETIIKYTFQAIN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
VIACNTA E + + + +G + A + A + T++ ++ I+ T T
Sbjct: 62 KTKGVKAIVIACNTATARSLKEAQEKY-DIPIIGVIEAGARTAVSSTKNKIVGIIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I I + + VEE ++ + K ++ E + K
Sbjct: 121 ISSKAYNLEISKIDESIEIVNKACPLFVPIVEEGWANTEVAKLTAKIYLQ----ELKEKN 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D +VL CTHYP++ + + ++ + A+ + +L N + T + +
Sbjct: 177 IDSLVLGCTHYPILKRTIGEEVGEHIKLVNPAKETAKDLKKVLEVKNIINNTEIHGTYQY 236
Query: 251 FLSGKPDIAMRRLMQGF 267
++S P+ +
Sbjct: 237 YVSDIPEKFTDIAREFL 253
>gi|291546372|emb|CBL19480.1| glutamate racemase [Ruminococcus sp. SR1/5]
Length = 273
Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 17/263 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ID + +FDSGIGGL V +++ +P +Y D PYG+ +
Sbjct: 1 MNID-------RNAPVGVFDSGIGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSRETV 53
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQ 119
+ + L + + V+ACNTA D ++ + LG + A K AA T+
Sbjct: 54 IRYSRQIIH-FLQEQKVKAIVVACNTASAFALDAVKDEL-DIPILGVIEAGAKVAAQETR 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + I+ T T+ ++ + + + + + VEE + E+ ++
Sbjct: 112 NKRVGIIGTVGTVGSGIHASYLKELDPEITVIGKACPLFVPLVEEGWYHDPVTEEVARR- 170
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
E + + D ++L CTHYPL+ R++ V ++ + A + LL R++
Sbjct: 171 ---YLKELQEQEIDTLILGCTHYPLLRSTIRKIMGEEVCLVNPAYETALELKKLLSRLDL 227
Query: 240 HQTRVFDD---HALFLSGKPDIA 259
V + + ++S +
Sbjct: 228 SSNEVAQEEFPYRFYVSDLAEKF 250
>gi|194449428|ref|YP_002048128.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194407732|gb|ACF67951.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
Length = 260
Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 137/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPNLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|151567723|pdb|2JFQ|A Chain A, Crystal Structure Of Staphylococcus Aureus Glutamate
Racemase In Complex With D-Glutamate
gi|151567724|pdb|2JFQ|B Chain B, Crystal Structure Of Staphylococcus Aureus Glutamate
Racemase In Complex With D-Glutamate
Length = 286
Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 7/266 (2%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + I + DSG+GGL V +++ +P Y+ D PYG +K+ +
Sbjct: 16 PRGSHMNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVE 75
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
+ +++ + + VIACNTA + + L+ T S++ +G + P + A T++ + +
Sbjct: 76 IARKLME-FDIKMLVIACNTATAVALEYLQKTL-SISVIGVIEPGARTAIMTTRNQNVLV 133
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L T T++ I +H V+ VE+ + I
Sbjct: 134 LGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLK 190
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV- 244
+D ++L CTHYPL+ + + AR LL N H +
Sbjct: 191 RWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTE 250
Query: 245 FDDHALFLSGKPDIAMRRLMQGFGLK 270
DH F +G + + L
Sbjct: 251 HPDHRFFATGDTTHITNIIKEWLNLS 276
>gi|314933347|ref|ZP_07840712.1| glutamate racemase [Staphylococcus caprae C87]
gi|313653497|gb|EFS17254.1| glutamate racemase [Staphylococcus caprae C87]
Length = 266
Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +++ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGDEVRQFTTEIAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQRLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +++ V+ VE+ + I +
Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 176 DADTVILGCTHYPLLYKPIYDYFDGEKTVISSGLETAREVSALLTFSNEHASYTEHPKHR 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G + +
Sbjct: 236 FFATGDTTHIKNIIAEWL 253
>gi|330502036|ref|YP_004378905.1| glutamate racemase [Pseudomonas mendocina NK-01]
gi|328916322|gb|AEB57153.1| glutamate racemase [Pseudomonas mendocina NK-01]
Length = 271
Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 5/271 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + I +FDSG+GGL VL+++R L+P +YVAD PYG +
Sbjct: 1 MILPAAFAAMPSNAPIGVFDSGVGGLSVLREIRQLLPNETLLYVADSGHVPYGEKSPEYI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
++R + + ++ L V+ACNTA ELR + + +G PA+K AAA T+S
Sbjct: 61 RERCV-VITEHLRAQGAKALVLACNTATAAAAGELRERYADLPIVGMEPAVKPAAAATRS 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T TL+ + L+ + + + L +E +++ ++ +
Sbjct: 120 GVVGVLATTGTLKSARFAALLDRFANDVRVITQPCPGLVECIEAG----ELQAPATRELL 175
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+G + D ++L CTHYP + + +L P V +D ++AR+ + LL + +
Sbjct: 176 QGYVAPLLAEGCDTLILGCTHYPFLRPLLGELVPPSVTLIDTGAAVARQLQRLLTQHDLL 235
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
T + SG+ R L G K+
Sbjct: 236 ATTPAQATRYWSSGEVSQLCRVLPILLGEKA 266
>gi|319957379|ref|YP_004168642.1| glutamate racemase [Nitratifractor salsuginis DSM 16511]
gi|319419783|gb|ADV46893.1| glutamate racemase [Nitratifractor salsuginis DSM 16511]
Length = 278
Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 13/259 (5%)
Query: 8 CEKKLQNS------ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ K+QN I IFDSG+GGL VL+ + +P +Y+AD PYG ++
Sbjct: 1 MKSKIQNPKSKIVRIGIFDSGLGGLTVLRPIMQALPGAEILYLADTAHAPYGEKSREEIR 60
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+ + + ++ V+ACNTA + LR FP + +G P IK A ++S
Sbjct: 61 SYSLGIAEYFIREHDVDALVVACNTATSAAIATLRERFPDLPIVGTEPGIKPAVRASRSA 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ IL+TPATL L ++ + + L R+E +++ E ++
Sbjct: 121 KVGILATPATLAGEKYQALAERLCTEHEVQLFEQACPGLVERIERG----EVESPECRRM 176
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+EG D IVL CTHYPL R++ PV ++ ++IARR LL +
Sbjct: 177 LEGWLAPMREAGVDTIVLGCTHYPLAASAIREVMGTPVTLIETGEAIARRLLSLLGECES 236
Query: 240 HQTRVFDDHALFLSGKPDI 258
++ L+ +G D
Sbjct: 237 -KSNGEPVLKLYATGPIDT 254
>gi|125624017|ref|YP_001032500.1| glutamate racemase [Lactococcus lactis subsp. cremoris MG1363]
gi|166231039|sp|A2RKH0|MURI_LACLM RecName: Full=Glutamate racemase
gi|124492825|emb|CAL97780.1| MurI protein [Lactococcus lactis subsp. cremoris MG1363]
gi|300070787|gb|ADJ60187.1| glutamate racemase [Lactococcus lactis subsp. cremoris NZ9000]
Length = 271
Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 19/270 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V +++ +P +Y+ D PYG +
Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K + V+ACNTA + + ++ + +G + P A T++
Sbjct: 53 FTWDMVNFLLSK-NVKMIVMACNTATAMALEIVKEEL-DIPVIGVILPGASSAIQKTKTN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T A++R I S + ++ S VE +++ + K+ +
Sbjct: 111 KIGVIATQASIRSDEYHKTIARKSSAIEVLSLACPKFVSIVESN----EMESEIAKRVVS 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INT 239
GK D ++L CTHYPL+ + ++ V +D+ R LL IN
Sbjct: 167 ESLAPLVGK-IDTLILGCTHYPLLRPLIQETMGKEVRLIDSGAEAVRDISVLLNYFEINA 225
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFGL 269
H+ + F H + + + + +
Sbjct: 226 HERKEF-QHCFYTTAGVNSFREIAEKWLNI 254
>gi|123440538|ref|YP_001004532.1| glutamate racemase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|166231066|sp|A1JI42|MURI_YERE8 RecName: Full=Glutamate racemase
gi|122087499|emb|CAL10280.1| putative glutamate racemase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 287
Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats.
Identities = 88/271 (32%), Positives = 142/271 (52%), Gaps = 9/271 (3%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
K D P L IFDSG+GGL V Q++R L+P+ H+IY D+V FPYG +
Sbjct: 19 KADTAPRPTAL-----IFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIV 73
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+R++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G
Sbjct: 74 ERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNG 132
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++ +L+T T+ +YT +LI + + C I L+ S L E G + ++ +KK +
Sbjct: 133 VVGLLATRGTVHASYTQDLIERFATDCKIELLGSSELVELAETKLHGGVVPKEALKKILH 192
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+E D IVL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 193 PWLAMREP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVI 250
Query: 242 TRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+ ++ A ++ D A+ ++QG+G S
Sbjct: 251 SSDEENIAYCMALNADTDALLPVLQGYGFPS 281
>gi|332800387|ref|YP_004461886.1| glutamate racemase [Tepidanaerobacter sp. Re1]
gi|332698122|gb|AEE92579.1| Glutamate racemase [Tepidanaerobacter sp. Re1]
Length = 269
Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 6/250 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL V ++ L+P+ + +Y D PYG + + +L
Sbjct: 5 NKPIGVFDSGIGGLTVAGEIMKLLPKENIVYFGDTARVPYGPKSSEVVTQFAFEGLRFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K L VIACNT D+L ++ P P + A A T++ ++ ++ T T+
Sbjct: 65 GK-DVKLIVIACNTVSATCLDKLCASSPVPVIGVIEPGARAAVAATENQVVGVIGTERTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH+ Q IH + + VEE + K +E + +
Sbjct: 124 KSCAYERAIHALNKQIKIHSKACPLFVPLVEEGWLENEAAFYTAKTYLES----LKKQGI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251
D +VLACTHYPL+ ++ V +D++ AR + +L N + + F
Sbjct: 180 DTLVLACTHYPLLKLTLGKVMGETVRLVDSAWETAREVQRILIDKNLKRQDNSPAFYQYF 239
Query: 252 LSGKPDIAMR 261
+S P+ ++
Sbjct: 240 VSDNPEKFVQ 249
>gi|168262957|ref|ZP_02684930.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|194446431|ref|YP_002043393.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|238912271|ref|ZP_04656108.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|194405094|gb|ACF65316.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|205348286|gb|EDZ34917.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 260
Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDTNIAYCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|218438768|ref|YP_002377097.1| glutamate racemase [Cyanothece sp. PCC 7424]
gi|226722981|sp|B7KCC4|MURI_CYAP7 RecName: Full=Glutamate racemase
gi|218171496|gb|ACK70229.1| glutamate racemase [Cyanothece sp. PCC 7424]
Length = 278
Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 9/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I IFDSG+GGL VL+++ +P +Y AD PYG + + + + D +
Sbjct: 6 RSPIGIFDSGVGGLTVLRELYRRLPNESILYFADTARLPYGTRSAGEILQFVREIM-DWM 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
Q + ++ACNT+ L + +R F ++ LG + P + A + I +++TPAT
Sbjct: 65 TSQQVKMVIMACNTSSALALEAIRDEF-ALPVLGVILPGARAAVQ--KGKRIGVIATPAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I S + V +E+ ++ E K+ +
Sbjct: 122 AASNAYRQAIEEIDSTAQVWQVGCPDFVPLIEQN----RLYEPYTKEVAKQYLNPLLQVN 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +V CTHY + +FRQ+ P + +D + + A L + T
Sbjct: 178 IDTLVYGCTHYRHLEPLFRQILPPSISLVDPAQYVVSAAEKELELLGLKSTLPCLPTRFC 237
Query: 252 LSGKPDIAMRRLMQGFGL 269
+SG P+ Q G
Sbjct: 238 VSGNPETFANLSRQWLGY 255
>gi|225375887|ref|ZP_03753108.1| hypothetical protein ROSEINA2194_01523 [Roseburia inulinivorans DSM
16841]
gi|225212322|gb|EEG94676.1| hypothetical protein ROSEINA2194_01523 [Roseburia inulinivorans DSM
16841]
Length = 290
Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 7/264 (2%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N ++ +Q I +FDSG+GG+ VL+++ LMP +FI+ D PYG ++K
Sbjct: 27 NRNMDE-MQRPIGVFDSGVGGISVLRELVALMPNENFIFYGDSKNAPYGTKTLEEVRKLT 85
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLI 123
+ + + L V+ACNTA + LR + + +G PA+K A + ++ +
Sbjct: 86 LADAEYLRSRNVKAL-VVACNTATSAAIHILREKYQKEIPVIGIEPALKPAVSVKENSRV 144
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++TP TLR NL+ + Q I + L VE ++ + ++ ++
Sbjct: 145 LVMATPMTLREKKFHNLMQKFQDQAEIISLPCPGLVEFVERG----ELSGEALEHFLKNL 200
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
F + ++ D +VL CTHYPL+ +++ V D AR L +
Sbjct: 201 FAPYQERKVDAVVLGCTHYPLVRKTIQKVLGSGVAVFDGGAGTARETLHKLKEYSLVSDA 260
Query: 244 VFDDHALFLSGKPDIAMRRLMQGF 267
V F + D AM L +
Sbjct: 261 VTPGTVQFYNSTEDQAMIELSKYL 284
>gi|329766985|ref|ZP_08258513.1| glutamate racemase [Gemella haemolysans M341]
gi|328837710|gb|EGF87335.1| glutamate racemase [Gemella haemolysans M341]
Length = 264
Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 102/258 (39%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N+I +FDSG+GGL V +++ +P Y D PYG+ + K +
Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTREEIIKYTDRAVKYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+DK + V+ACNTA + L+ + + +G V P ++A T++ + +L T
Sbjct: 61 IDKG-VKMVVLACNTATAAALNYLQDKY-DIPIIGVVQPGARRAIQATENNKVLVLGTKF 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T + I + S + + +E + +D KK I
Sbjct: 119 TAKSKVYDIEIENINSDIQVVDKACPAFVPFIES---EGNVDKDATKKIIHETLENTRNL 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D +VL CTHYP++ + + + + AR +L HQ R DH
Sbjct: 176 GVDTVVLGCTHYPILKKDIEEYYGNNIKVISSGREAAREVSSVLGYAKLHQKRFNKKDHE 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
++S + +
Sbjct: 236 FYISEASENFNNIASKWL 253
>gi|121602574|ref|YP_989115.1| glutamate racemase [Bartonella bacilliformis KC583]
gi|166231026|sp|A1UT12|MURI_BARBK RecName: Full=Glutamate racemase
gi|120614751|gb|ABM45352.1| glutamate racemase [Bartonella bacilliformis KC583]
Length = 271
Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats.
Identities = 129/260 (49%), Positives = 173/260 (66%), Gaps = 2/260 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++ FDSGIGGL VL++ R L+PE F+YVADD GFPYG WE+ LK R++ +F+++L
Sbjct: 3 EKPVIFFDSGIGGLTVLKEARILIPELQFVYVADDAGFPYGAWEEDVLKGRILKVFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P L VIACNTA TL+ +LR FP + F+G VPAIK AAA T+SGLIS+L+TP T+
Sbjct: 63 KLYTPALCVIACNTASTLMISDLRQEFPHIPFVGTVPAIKSAAAQTKSGLISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI S+ +QCH+ LV S LA+ E Y G I +E++ EI CF+EK GK T
Sbjct: 123 KRAYTHELISSFANQCHVELVGSKKLATFAENYLRGYPIDYEELRHEILPCFVEKNGKYT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHAL 250
DVIVLACTHYP ++ +F + + W V+W+D + +IAR R LL N + ++AL
Sbjct: 183 DVIVLACTHYPFLISLFHKQALWSVNWIDPAKAIARHTRSLLLETMKNKSSKKNIKNYAL 242
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S D RL+Q F L
Sbjct: 243 FTSQNIDFVTERLLQRFNLN 262
>gi|119509564|ref|ZP_01628711.1| glutamate racemase [Nodularia spumigena CCY9414]
gi|119465753|gb|EAW46643.1| glutamate racemase [Nodularia spumigena CCY9414]
Length = 297
Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 10/268 (3%)
Query: 3 IDNYPCEKKLQN-SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
D++ +K+ Q I +FDSG+GGL VL+++ +P IY D PYG +
Sbjct: 20 FDDHLADKEPQRAPIGVFDSGVGGLTVLRQLYRHLPNESIIYFGDTARLPYGIRTQVEIL 79
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
+ + + + + + + + ++ACNT+ L + +R F S+ +G + P K A Q
Sbjct: 80 QYVREILNWM-QQQRVKMVIMACNTSSALALEIVRREF-SLPIIGVILPGAKAAVQ--QG 135
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +++TPAT + + I + + VS +E+ + + +
Sbjct: 136 KRIGVIATPATAKSNAYRHAILEMDANVQVWQVSCPEFVPLIEQNRINDPYTTEVARSYL 195
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E + D +V CTHYP + + R L P V +D + + L +
Sbjct: 196 E----PLIQQEIDTLVYGCTHYPHLAPILRSLLPSQVKLVDPAVHVVAACTQELELLGLT 251
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFG 268
T +SG P + +Q G
Sbjct: 252 NTHPPLPTRFAVSGCPQKFAKSGVQWLG 279
>gi|27467761|ref|NP_764398.1| glutamate racemase [Staphylococcus epidermidis ATCC 12228]
gi|251810598|ref|ZP_04825071.1| glutamate racemase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876402|ref|ZP_06285269.1| glutamate racemase [Staphylococcus epidermidis SK135]
gi|293366868|ref|ZP_06613544.1| glutamate racemase [Staphylococcus epidermidis M23864:W2(grey)]
gi|29839516|sp|Q8CPL0|MURI_STAES RecName: Full=Glutamate racemase
gi|27315305|gb|AAO04440.1|AE016746_230 glutamate racemase [Staphylococcus epidermidis ATCC 12228]
gi|251805758|gb|EES58415.1| glutamate racemase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295427|gb|EFA87954.1| glutamate racemase [Staphylococcus epidermidis SK135]
gi|291319169|gb|EFE59539.1| glutamate racemase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329730002|gb|EGG66393.1| glutamate racemase [Staphylococcus epidermidis VCU144]
gi|329734459|gb|EGG70772.1| glutamate racemase [Staphylococcus epidermidis VCU045]
gi|329736265|gb|EGG72537.1| glutamate racemase [Staphylococcus epidermidis VCU028]
Length = 267
Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +KK L +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKKFTTELAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L++ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALNYLQNILP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +++ V+ VE+ + + I +
Sbjct: 119 TIKSEAYRTHIKKINPNVNVYSVACPGFVPLVEQMRYKDPTITNIV---IHQTLKQWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D ++L CTHYPL+ + + + AR LL N H + H
Sbjct: 176 DADTVILGCTHYPLLYQPIYEYFSGTKTVISSGLETAREVSALLTFSNEHASYTEHPQHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G + + +K
Sbjct: 236 FFATGDTTHIKNIIDEWLNMK 256
>gi|161617274|ref|YP_001591239.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|197262992|ref|ZP_03163066.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|198241754|ref|YP_002218058.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|200386743|ref|ZP_03213355.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|161366638|gb|ABX70406.1| hypothetical protein SPAB_05116 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197241247|gb|EDY23867.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197936270|gb|ACH73603.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199603841|gb|EDZ02386.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|312915247|dbj|BAJ39221.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321225423|gb|EFX50481.1| Glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
Length = 260
Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|225021576|ref|ZP_03710768.1| hypothetical protein CORMATOL_01597 [Corynebacterium matruchotii
ATCC 33806]
gi|224945567|gb|EEG26776.1| hypothetical protein CORMATOL_01597 [Corynebacterium matruchotii
ATCC 33806]
Length = 288
Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 14/269 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKI N + I IFDSG+GGL V + + +P Y+ D PYG +
Sbjct: 21 MKITN-------NSPIGIFDSGVGGLTVARTIMEQLPGESITYIGDTAHSPYGPLPIAEV 73
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K + + +++++ +L VIACNTA + R + PA+++A A T++
Sbjct: 74 RKHALRIADELVERGSKML-VIACNTASAACLRDARERYDVPVIEVIHPAVRRAVATTRN 132
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G I ++ T T+ +L S I + VE + +I
Sbjct: 133 GRIGVIGTSGTINSGAYQDLF-SVNPNVEITAQACPRFVDFVERGITSGR----QILGVA 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTHYPL+ V + V + +++ A+ L +
Sbjct: 188 QAYIEPLQTAGVDTLVLGCTHYPLLSGVIQLAIGDNVTLVSSAEETAKDVLKQLSTTDML 247
Query: 241 QTR-VFDDHALFLSGKPDIAMRRLMQGFG 268
H +G P++ + + G
Sbjct: 248 ADESTTPIHHFESTGDPELFSQLAKRFLG 276
>gi|19553709|ref|NP_601711.1| glutamate racemase [Corynebacterium glutamicum ATCC 13032]
gi|62391349|ref|YP_226751.1| glutamate racemase [Corynebacterium glutamicum ATCC 13032]
gi|21325280|dbj|BAB99902.1| Glutamate racemase [Corynebacterium glutamicum ATCC 13032]
gi|41326690|emb|CAF21172.1| GLUTAMATE RACEMASE [Corynebacterium glutamicum ATCC 13032]
Length = 284
Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 112/270 (41%), Gaps = 10/270 (3%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ P I IFDSG+GGL V + + +P IY+ D PYG ++
Sbjct: 11 SMIERPVP-GADAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVR 69
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+ + + +++++ + VIACNTA + R + +PA+++A A T++G
Sbjct: 70 EHAIRIADELVERG-CKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNG 128
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ T T+ +L + ++ V+ VE + +I +
Sbjct: 129 KVGVIGTVGTINSGAYQDLFSA-SPSIVVNAVACPRFVDFVERGITSGR----QILNIAQ 183
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + D +VL CTHYPL+ V + V + +++ A+ +L + +
Sbjct: 184 DYLEPLQAEGVDTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLA 243
Query: 242 T---RVFDDHALFLSGKPDIAMRRLMQGFG 268
++ +G P+I + + G
Sbjct: 244 DPDMHPEPSYSFESTGDPEIFAQLSRRFLG 273
>gi|317050042|ref|YP_004117690.1| glutamate racemase [Pantoea sp. At-9b]
gi|316951659|gb|ADU71134.1| glutamate racemase [Pantoea sp. At-9b]
Length = 284
Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 137/262 (52%), Gaps = 4/262 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L+ ++L+FDSG+GGL V +++R L+P H++Y D+ GFPYG + + R++ +
Sbjct: 18 SDLRPTVLVFDSGVGGLSVYEEIRQLLPNLHYLYAFDNEGFPYGEKTETYIVDRVVSIVE 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I + L VIACN+A T+ LR+ F +G VPAIK AA T++G++ +L+T
Sbjct: 78 AITQHFPLALVVIACNSASTVSLPALRAKF-DFPVVGVVPAIKPAARLTRNGVVGLLATR 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R YT L+ + +C I ++ S L E G ++ D++++ ++ KE
Sbjct: 137 GTVKRPYTHELVAQFARECQIKMLGSAELVELAEAKLHGEEVLLDDVRRVVQPWLRMKEP 196
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PL+ + + P +D+ +IARR LL + A
Sbjct: 197 --PDTVVLGCTHFPLLRDELQLVLPEGTRLVDSGAAIARRTAWLLEHAAPVALSDAPNMA 254
Query: 250 LFLSGKPDI-AMRRLMQGFGLK 270
++ + ++Q +G
Sbjct: 255 FCTRMDEEVLQLSPVLQRYGFP 276
>gi|161505378|ref|YP_001572490.1| glutamate racemase [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|194472599|ref|ZP_03078583.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194738355|ref|YP_002117043.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|213051820|ref|ZP_03344698.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213427064|ref|ZP_03359814.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213646315|ref|ZP_03376368.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|224585944|ref|YP_002639743.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|289830049|ref|ZP_06547498.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|16504616|emb|CAD09499.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29139435|gb|AAO71002.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|160866725|gb|ABX23348.1| hypothetical protein SARI_03532 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|194458963|gb|EDX47802.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194713857|gb|ACF93078.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|224470472|gb|ACN48302.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322613115|gb|EFY10059.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619257|gb|EFY16140.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322626123|gb|EFY22935.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626417|gb|EFY23223.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632469|gb|EFY29217.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635048|gb|EFY31769.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642749|gb|EFY39339.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646426|gb|EFY42937.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322648559|gb|EFY45009.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322654820|gb|EFY51138.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322657287|gb|EFY53567.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662226|gb|EFY58441.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669773|gb|EFY65917.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672032|gb|EFY68147.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675753|gb|EFY71825.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681831|gb|EFY77857.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322683974|gb|EFY79983.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323193245|gb|EFZ78460.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197603|gb|EFZ82736.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323202193|gb|EFZ87248.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323207172|gb|EFZ92124.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323211374|gb|EFZ96215.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323218581|gb|EGA03289.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323220937|gb|EGA05369.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226066|gb|EGA10284.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231593|gb|EGA15705.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236901|gb|EGA20972.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239421|gb|EGA23470.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323243986|gb|EGA27997.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323249349|gb|EGA33266.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323250408|gb|EGA34291.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258862|gb|EGA42514.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323260886|gb|EGA44486.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265226|gb|EGA48723.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270448|gb|EGA53894.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 260
Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|323699601|ref|ZP_08111513.1| glutamate racemase [Desulfovibrio sp. ND132]
gi|323459533|gb|EGB15398.1| glutamate racemase [Desulfovibrio desulfuricans ND132]
Length = 279
Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 7/267 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + I +FDSG+GGL VL+ +R MP +Y+ D PYG + + +
Sbjct: 1 MKNQAKLPIGMFDSGVGGLTVLKALRERMPCEDVLYLGDTARLPYGTKSPQTVTRYGVQC 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
++++ + L V+ACNTA + D LR P + +G V P + A T + ++++
Sbjct: 61 GAELIKRG-IKLLVVACNTASAVALDALREANPGVPVIGVVDPGARAACQATTNQAVAVI 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T +T+ IH+ Q I + + EE + E + ++ F
Sbjct: 120 ATESTIAGGAYQRAIHAINPQARILGHPCPLFVALAEEGWTDGHVPEAVAARYLDPIFKP 179
Query: 187 KEGKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
G D +VL CTH+PL+ R + P +D++ + A L R+ ++
Sbjct: 180 ASGTEHPVIPDTLVLGCTHFPLLAPAIRNVVPEHTTIVDSAATTAETVYRELDRLGLNRP 239
Query: 243 RVF-DDHALFLSGKPDIAMRRLMQGFG 268
+ R + G
Sbjct: 240 ENGCGSTRYLTTDDVPRFARTGSRFLG 266
>gi|281491802|ref|YP_003353782.1| glutamate racemase [Lactococcus lactis subsp. lactis KF147]
gi|281375516|gb|ADA65026.1| Glutamate racemase [Lactococcus lactis subsp. lactis KF147]
Length = 271
Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats.
Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 17/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V +++ +P +Y+ D PYG +
Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K + V+ACNTA + + ++ + +G + P A T++
Sbjct: 53 FTWDMVNFLLSK-DVKMIVMACNTATAMALEIVKEKL-DIPVIGVILPGASSAIQKTKTN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T A++R I S ++ ++ S VE +++ + +K +
Sbjct: 111 KIGVIATQASIRSDEYHKTIARKSSAVEVYSLACQKFVSIVESN----EMESEIARKVVS 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH- 240
+ GK D ++L CTHYPL+ + ++ V +D+ R LL + +
Sbjct: 167 ESLVPLIGK-VDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLLNYFSING 225
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGL 269
Q R +H + + + + +
Sbjct: 226 QERQPLEHRFYTTAGVNSFREIAEKWLNI 254
>gi|145296506|ref|YP_001139327.1| glutamate racemase [Corynebacterium glutamicum R]
gi|140846426|dbj|BAF55425.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 284
Score = 297 bits (762), Expect = 9e-79, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 112/270 (41%), Gaps = 10/270 (3%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ P I IFDSG+GGL V + + +P IY+ D PYG ++
Sbjct: 11 SMIERPLP-GADAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVR 69
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+ + + +++++ + VIACNTA + R + +PA+++A A T++G
Sbjct: 70 EHAIRIADELVERG-CKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNG 128
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ T T+ +L + ++ V+ VE + +I +
Sbjct: 129 KVGVIGTVGTINSGAYQDLFSA-SPSIVVNAVACPRFVDFVERGITSGR----QILNIAQ 183
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + D +VL CTHYPL+ V + V + +++ A+ +L + +
Sbjct: 184 DYLEPLQAEGVDTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLA 243
Query: 242 T---RVFDDHALFLSGKPDIAMRRLMQGFG 268
++ +G P+I + + G
Sbjct: 244 DPDMHPEPSYSFESTGDPEIFAQLSRRFLG 273
>gi|292486642|ref|YP_003529512.1| glutamate racemase [Erwinia amylovora CFBP1430]
gi|292897879|ref|YP_003537248.1| glutamate racemase [Erwinia amylovora ATCC 49946]
gi|291197727|emb|CBJ44822.1| glutamate racemase [Erwinia amylovora ATCC 49946]
gi|291552059|emb|CBA19096.1| Glutamate racemase [Erwinia amylovora CFBP1430]
gi|312170706|emb|CBX78969.1| Glutamate racemase [Erwinia amylovora ATCC BAA-2158]
Length = 283
Score = 297 bits (762), Expect = 9e-79, Method: Composition-based stats.
Identities = 84/269 (31%), Positives = 148/269 (55%), Gaps = 6/269 (2%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D P + ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R
Sbjct: 14 DATPSAPR--PTVLIFDSGVGGLSVYSEIRALLPDLHYLYAFDNVAFPYGEKSEEFIVER 71
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + + + +Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++
Sbjct: 72 VLAIVTAVTRRYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIV 130
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T++R YT L+ + +C ++ S L E G + +E+++ ++
Sbjct: 131 GLLATRGTVKRPYTHELVARFAGECRTEMLGSGELVELAEAKLHGQPVAIEEVRRILQPW 190
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ + D +VL CTH+PLI +Q+ P +D+ +IARR LL +
Sbjct: 191 L--RMSEPPDTVVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPVAVS 248
Query: 244 VFDDHALFL-SGKPDIAMRRLMQGFGLKS 271
D+ AL L + + + + ++Q +G K+
Sbjct: 249 TDDNMALCLDNTEQAVQLIPVLQRYGFKT 277
>gi|82750757|ref|YP_416498.1| glutamate racemase [Staphylococcus aureus RF122]
gi|123549008|sp|Q2YXC5|MURI_STAAB RecName: Full=Glutamate racemase
gi|82656288|emb|CAI80702.1| glutamate racemase [Staphylococcus aureus RF122]
Length = 266
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 M-GFDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ + I
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G + + L
Sbjct: 236 FFATGDTTHITNIIKEWLNLS 256
>gi|300721344|ref|YP_003710615.1| glutamate racemase [Xenorhabdus nematophila ATCC 19061]
gi|297627832|emb|CBJ88367.1| glutamate racemase [Xenorhabdus nematophila ATCC 19061]
Length = 287
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 86/262 (32%), Positives = 134/262 (51%), Gaps = 4/262 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + +IL+FDSG+GGL V +++R L+P+ H+IY D+ FPYG + R++ +
Sbjct: 21 NKTARPTILVFDSGVGGLSVYKEIRKLLPDLHYIYAFDNEAFPYGEKTADVIIDRVVKVV 80
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I K+ + VIACNTA T+ LR F S +G VPAIK AA + + ++ +L+T
Sbjct: 81 DAIQKKHPLAVVVIACNTASTVSLPVLRERF-SFPVVGVVPAIKPAAKLSCNRIVGLLAT 139
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ R YT LI + + C +H + S L E G + DE++K ++ KE
Sbjct: 140 RATVNRGYTKELITRFATDCQVHSIGSAELVELAERKLHGKDVPLDELEKVLKPWLRMKE 199
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++L CTH+PLI Q+ P +D+ +IARR L+ D+
Sbjct: 200 P--PDTVILGCTHFPLIAEELSQVLPDGTRLIDSGAAIARRTAWLIKNRADLFLTTVDNL 257
Query: 249 ALFLSGKPD-IAMRRLMQGFGL 269
A D A+ ++ +G
Sbjct: 258 AYCTKLDADSEALSPVLYEYGF 279
>gi|293391663|ref|ZP_06635997.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952197|gb|EFE02316.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 275
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 134/260 (51%), Gaps = 5/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+++IL FDSG+GGL V ++++ L+P +H++Y D+ FPY + + +R + + I
Sbjct: 6 KSTILFFDSGVGGLSVYREVKQLLPNHHYLYCFDNAYFPYSEKPEEKIIERTLKICQRID 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y L VIACNTA T++ LR F S+ +G VPAIK AA + + I +L+T T+
Sbjct: 66 QMYPLDLIVIACNTASTVVLPSLREHF-SIPIVGTVPAIKPAAEQSMTKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R Y S+LI Y + C + + S L E G I +EIK E+
Sbjct: 125 KRKYLSDLIDKYAADCRVEKIGSTKLVELAERKLHGYPIDLNEIKSEVLTWV---TMSDL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PLI +Q P + ++D+ ++A+R LL + ++
Sbjct: 182 DCVVLGCTHFPLIKSEIQQCLPQVIYFIDSGAAVAKRVESLLSDVKVRSKNQTNNQVFCT 241
Query: 253 SG-KPDIAMRRLMQGFGLKS 271
P+ + L+Q G ++
Sbjct: 242 KMISPEDGLPNLIQSLGFET 261
>gi|312135723|ref|YP_004003061.1| glutamate racemase [Caldicellulosiruptor owensensis OL]
gi|311775774|gb|ADQ05261.1| glutamate racemase [Caldicellulosiruptor owensensis OL]
Length = 267
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 6/242 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M +L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQNTRFLLS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K + V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 64 K-NVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKKIGVIGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VEE ++ K+ +E E K D
Sbjct: 123 SGSFEKKILELDSSIKVFSKPCPLFVPLVEEGWTDKEVTYLVAKEYLE----EFIEKEID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + V +++ P V ++ + A+R +L + + + F +
Sbjct: 179 TLVLGCTHYPFLQDVIKKVLP-DVILINPARETAKRVFEVLKENDILNSSCEEPTYYFYA 237
Query: 254 GK 255
Sbjct: 238 SD 239
>gi|170729028|ref|YP_001763054.1| glutamate racemase [Shewanella woodyi ATCC 51908]
gi|229486277|sp|B1KN02|MURI_SHEWM RecName: Full=Glutamate racemase
gi|169814375|gb|ACA88959.1| glutamate racemase [Shewanella woodyi ATCC 51908]
Length = 266
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 85/265 (32%), Positives = 138/265 (52%), Gaps = 11/265 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSG+GGL +L ++R ++P+ ++ Y+ D+ PYG E+ L L +
Sbjct: 1 MSGPILVFDSGVGGLSILDEIRRVLPDQNYCYLFDNARLPYGELEEQELIDGCEALITAT 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + L VIACNTA TL+ LR ++ +G VPAIK AA Y+Q+ I +L+TP T
Sbjct: 61 VAQLGASLVVIACNTASTLVLPVLREAL-TIPVVGVVPAIKPAALYSQAKHIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT +LI + + C + L S L E A G +I ++ EI +
Sbjct: 120 IKRSYTHSLIQEFAANCQVELYGSSELVLLAERKASGKQI----LQGEIAQLLSPIKVSG 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--- 248
D +VL CTH+P++ +Q V LD+ ++A R L+ +T R H
Sbjct: 176 IDTLVLGCTHFPILKDEIQQYLGDGVLLLDSGKAVAARVSTLIKEESTLNKRQRKGHSKE 235
Query: 249 --ALFLSGKPDIAMRRLMQGFGLKS 271
AL+ S + +++L+ FG +
Sbjct: 236 MIALYTS-EVGEGLKKLLAEFGFST 259
>gi|302206779|gb|ADL11121.1| Glutamate racemase [Corynebacterium pseudotuberculosis C231]
gi|302331332|gb|ADL21526.1| Glutamate racemase [Corynebacterium pseudotuberculosis 1002]
gi|308277024|gb|ADO26923.1| Glutamate racemase [Corynebacterium pseudotuberculosis I19]
Length = 297
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 11/262 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I IFDSG+GGL V + + +P+ IY+ D PYG+ +++ M + +
Sbjct: 31 DASSPIGIFDSGVGGLTVARAIMEQLPQESVIYIGDTANSPYGSKPIAQVRELSMRIGDE 90
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
++ + + VIACNTA + +LR + S+ +G + PA+++A A T++G I +L T
Sbjct: 91 LVARG-CKMIVIACNTATSAALRDLRERY-SIPVVGVILPAVRRAVAATRNGKIGVLGTQ 148
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ L + ++ + S VE + +I +G +
Sbjct: 149 GTIASGAYQELFAA-SPGVEVYAQACPSFVSFVERGITSGR----QILGVAQGYTEGLQS 203
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---FD 246
D +VL CTHYPL+ V + V + +S+ + +L R +
Sbjct: 204 AGVDTLVLGCTHYPLLTGVIQLAVGDNVTLISSSEECVKDVLKVLSRNDMLAEATADKPP 263
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+ +G P + + M+ G
Sbjct: 264 SRSFESTGDPALFEQLAMRFLG 285
>gi|74317540|ref|YP_315280.1| glutamate racemase [Thiobacillus denitrificans ATCC 25259]
gi|74057035|gb|AAZ97475.1| glutamate racemase [Thiobacillus denitrificans ATCC 25259]
Length = 265
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 9/262 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ I +FDSGIGGL V++ + +P + +Y D PYG + +
Sbjct: 1 MSTNAHSPIGVFDSGIGGLTVVRALMERLPYENIVYFGDTARVPYGVKSVETIAHFTTQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+L+K L VIACNT + ++ P + L + A AA+ I ++
Sbjct: 61 AQFLLEK-DVKLLVIACNTMAAVAAQVVKDLSP-VPVLDVIDAG--AASARGGKKIGVIG 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP T+ + IH Y IH + + VEE ++ + +
Sbjct: 117 TPTTINSNAYARAIHDYAPDSRIHSQACPLFVPLVEEGWLDNEVT----RLTAQDYMKPL 172
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
+ D +VL CTHYPL+ + R++ V +D+++++A + +L +
Sbjct: 173 LAEHIDTLVLGCTHYPLLKPLLREVVGDGVALVDSAEAMAEQVAAVLAEKSLANPGPAQP 232
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+ +++ P + G
Sbjct: 233 RYDFYVTDVPLRFQTIGERFLG 254
>gi|319405660|emb|CBI79283.1| Glutamate racemase [Bartonella sp. AR 15-3]
Length = 270
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 127/259 (49%), Positives = 177/259 (68%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL +L+++R + EY FIYVADD GFPYG WE+ L+ R++ +F+ +L
Sbjct: 3 EQPLLFFDSGIGGLTILREVRLFVSEYQFIYVADDAGFPYGIWEEEMLRHRILKIFTYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Y P L VIACNTA TL+ ++LR FP++ F+G VPAIK AA T+SG+IS+L+TP T+
Sbjct: 63 ELYNPALCVIACNTASTLMIEDLRREFPNIHFVGTVPAIKLAAEQTKSGVISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI+S+ QC++ LV S LA E Y G I +E++ EI CFIEK GK T
Sbjct: 123 KRAYTHELINSFAGQCYVQLVGSEKLAGFAENYLRGYPINYEELRHEILPCFIEKNGKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251
D+IVLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP +I + + D LF
Sbjct: 183 DIIVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPMKIQNKNMKEYTDFTLF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + L+Q F LK
Sbjct: 243 TSQNISPSTENLLQKFHLK 261
>gi|319407232|emb|CBI80871.1| Glutamate racemase [Bartonella sp. 1-1C]
Length = 270
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 129/259 (49%), Positives = 175/259 (67%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ S+L FDSGIGGL +L+++R + EY FIY+AD+ GFPYG WE+ LK+R++ +F+ +L
Sbjct: 3 EQSLLFFDSGIGGLTILREVRLFVSEYQFIYIADNEGFPYGIWEEEILKRRILKIFTYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Y P L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SG+IS+L+TP+T+
Sbjct: 63 ELYNPALCVIACNTASTLMIKDLRRAFPNIRFVGTVPAIKLAAEQTKSGVISVLATPSTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI+S+ QCH+ LV S LA E Y G I +E+ EI CFIEK GK T
Sbjct: 123 RCAYTHELINSFAGQCHVQLVGSEKLAGFAESYLHGYPINHEELHHEILPCFIEKNGKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251
D +VLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP I + D ALF
Sbjct: 183 DTVVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPINIQNKNMKKHTDFALF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S A L+Q F LK
Sbjct: 243 TSQNISPATENLLQKFHLK 261
>gi|229159921|ref|ZP_04287928.1| Glutamate racemase [Bacillus cereus R309803]
gi|228623660|gb|EEK80479.1| Glutamate racemase [Bacillus cereus R309803]
Length = 276
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 107/261 (40%), Gaps = 7/261 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F +
Sbjct: 5 NENSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFI-FEMVE 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ V+ACNT +L+ S+ +G + P + A T+ G I ++ T
Sbjct: 64 FLKQFPLKALVVACNTGAAAALTDLQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTV 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H + +H + LA+ VE I + ++++ +
Sbjct: 123 GTIKSNMYEKALHELDTYLEVHSHACPTLATVVENQLEDI----AYVTQQVKQALLPLTK 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D ++L CTHYPL+ ++ V + +++ A +L ++ H
Sbjct: 179 EDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDKLNPKHR 238
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G + G +
Sbjct: 239 FFTTGSVASFEHIAERWLGYQ 259
>gi|197248641|ref|YP_002149052.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197212344|gb|ACH49741.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 260
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 4/255 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238
Query: 257 D-IAMRRLMQGFGLK 270
+ ++Q +G +
Sbjct: 239 GAEQLLPVLQRYGFE 253
>gi|297539329|ref|YP_003675098.1| glutamate racemase [Methylotenera sp. 301]
gi|297258676|gb|ADI30521.1| glutamate racemase [Methylotenera sp. 301]
Length = 283
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 14/276 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+K + P K ++ I +FDSG+GG+ VL+ ++ L+P +YVAD PYGN +
Sbjct: 6 IKSNETPVNKPIEKPIAVFDSGVGGISVLKHIQALLPNEQLLYVADSKYAPYGNKTAAEI 65
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ R + ++ K L V+ACNTA D LR + S+ +G PA+K AA +++
Sbjct: 66 QARCFEIAEFLMAKDAKAL-VVACNTATAAAIDSLRERY-SLPIIGMEPAVKPAAEASRN 123
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G+I +L+T TL+ + L+ SY + + + L +E ++ D K I
Sbjct: 124 GIIGVLATTGTLKSAQFAGLLESYGRNVKVVTQACVGLVECIERG----ELDADNTKMLI 179
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D IVL CTHYP + H+ Q+ V +D ++A++ + L
Sbjct: 180 QQYCAPLLAEGADTIVLGCTHYPFVRHLIEQVVGANVALIDTGAAVAKQLKRQLEEKGLL 239
Query: 241 QTRVFD--------DHALFLSGKPDIAMRRLMQGFG 268
R + + + + A + Q +G
Sbjct: 240 SNRTAEADAQFSKSKVQFWTNSENPNAKVVIEQLWG 275
>gi|218245461|ref|YP_002370832.1| glutamate racemase [Cyanothece sp. PCC 8801]
gi|226722982|sp|B7JWN0|MURI_CYAP8 RecName: Full=Glutamate racemase
gi|218165939|gb|ACK64676.1| glutamate racemase [Cyanothece sp. PCC 8801]
Length = 281
Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 9/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++ +P+ +Y AD PYGN + + + + +
Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESMLYFADTARLPYGNRSGAEILQYVREILVWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + ++ACNT+ L D +RS F + LG + P + A Q I ++STPAT
Sbjct: 65 SQQNVKMVIMACNTSSALALDIVRSEF-NFPILGVILPGARAAVK--QGQRIGVISTPAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + V +E +I + K+ +
Sbjct: 122 AKSNAYRQAIQEINPKAQVWQVGCAEFVPLIEAN----RIHDPYTKQVAWKYLAPLLAQN 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +V CTHY + +F+++ P V+ +D ++ + A+ L +
Sbjct: 178 IDTLVYGCTHYRHLSPIFQEIIPPTVNLIDPANFVVAAAKKELELMGLRHNEPPLPTRFA 237
Query: 252 LSGKPDIAMRRLMQGFGL 269
+SG P + Q G
Sbjct: 238 VSGCPQTFSQISQQWLGY 255
>gi|223043787|ref|ZP_03613830.1| glutamate racemase [Staphylococcus capitis SK14]
gi|222442884|gb|EEE48986.1| glutamate racemase [Staphylococcus capitis SK14]
Length = 266
Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 99/258 (38%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGDEVKQFTTEIAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L++ P + +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQTLLP-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +++ V+ VE+ + I +
Sbjct: 119 TIKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 176 DADTVILGCTHYPLLYKPIYDYFDGEKTVISSGLETAREVSALLTFSNEHASYTEHPKHR 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G + +
Sbjct: 236 FFATGDTTHIKNIIAEWL 253
>gi|298243458|ref|ZP_06967265.1| glutamate racemase [Ktedonobacter racemifer DSM 44963]
gi|297556512|gb|EFH90376.1| glutamate racemase [Ktedonobacter racemifer DSM 44963]
Length = 308
Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 10/265 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I ++DSG GGL +L ++R ++P F+Y D PYG + + +
Sbjct: 39 RPYAPIGVYDSGAGGLTILTELRKILPHEDFLYYGDTRHCPYGVRSEQEIIELAKQASCF 98
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L++ L V+ACNTA + LR +FP + F+G VPA+K AA+ T+ G I + +T
Sbjct: 99 LLERG-VKLIVVACNTASQAALEALRLSFPDVPFVGVVPAVKPAASLTRKGRIGVAATNQ 157
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ Y LI + + ++ L + VE+ +++ E++ +
Sbjct: 158 AAKSAYLQQLIEDFATGVEVYAQGCSELVTLVEKG----QLQGPEVEATLRQSLHPLLQH 213
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-----HQTRVF 245
DV+VL CTH+P + R + V +D+ +IARR R LL + +
Sbjct: 214 DIDVLVLGCTHFPALREAIRHIVGPGVQVIDSGAAIARRTRFLLEQAGIAHPIDQASPEQ 273
Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270
++ SG Q G
Sbjct: 274 GLLQVWCSGDAHTFTTTASQVLGYP 298
>gi|323483118|ref|ZP_08088510.1| hypothetical protein HMPREF9474_00259 [Clostridium symbiosum
WAL-14163]
gi|323691441|ref|ZP_08105713.1| glutamate racemase [Clostridium symbiosum WAL-14673]
gi|323403538|gb|EGA95844.1| hypothetical protein HMPREF9474_00259 [Clostridium symbiosum
WAL-14163]
gi|323504487|gb|EGB20277.1| glutamate racemase [Clostridium symbiosum WAL-14673]
Length = 275
Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 14/256 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V++++ MP+ +Y D PYGN + + + +
Sbjct: 4 NAPIGVFDSGVGGLTVMREIMRQMPDERIVYFGDTARVPYGNKSKETVIRYSQQIIRFLQ 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-KQAAAYTQSGLISILSTPAT 131
K + VIACNTA + + + + +G + A + A T++G I I+ T AT
Sbjct: 64 TK-EVKAIVIACNTASACALEAVEKSL-DIPIIGVISAGSRAAVEATRNGKIGIIGTEAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R S + + + VEE + ++ +GK
Sbjct: 122 IRSGVYSEEMKQLRGDIEVTGKPCPLFVPLVEEGLLHDSVTDE----IASRYLACLKGKY 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-------V 244
D +V+ CTHYPL+ F++L V ++ + A + LL +
Sbjct: 178 IDTLVMGCTHYPLLRSTFKRLMGDDVTLVNPAYETAVELKGLLKEKGMTRGAKSEGVEDT 237
Query: 245 FDDHALFLSGKPDIAM 260
+ + F+S +
Sbjct: 238 REQYQFFVSDLAEKFT 253
>gi|213965871|ref|ZP_03394062.1| glutamate racemase [Corynebacterium amycolatum SK46]
gi|213951449|gb|EEB62840.1| glutamate racemase [Corynebacterium amycolatum SK46]
Length = 288
Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 9/258 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P +Y+ D PYG +++ + +++
Sbjct: 25 APIGIFDSGVGGLTVARAIMDQLPHESIMYIGDTANGPYGPLRIAEVRQHAEAIADELVA 84
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNTA + R +P +PA+++A + T++G + ++ T AT+R
Sbjct: 85 RG-CKMIVIACNTASAAFLRDARERYPVPVVEVILPAVRRAVSTTRNGKVGVIGTAATIR 143
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+L + V + V VE + +I EG + D
Sbjct: 144 SRAYQDLFDA-VPGVDVSAVDCPRFVDFVERGITSGR----QILGLAEGYLAPLQADGVD 198
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFDDHAL 250
+VL CTHYPL+ V + V + +++ ++ +L + + ++
Sbjct: 199 TLVLGCTHYPLLSGVIQLAMGEDVALVSSAEETSKDVLRILTKTDMLADPESNPNPVRTF 258
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G P + + G
Sbjct: 259 ESTGDPQVFASLAKRFLG 276
>gi|283770211|ref|ZP_06343103.1| glutamate racemase [Staphylococcus aureus subsp. aureus H19]
gi|283460358|gb|EFC07448.1| glutamate racemase [Staphylococcus aureus subsp. aureus H19]
Length = 266
Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ + I
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFDGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G + + L
Sbjct: 236 FFATGDTTHITNIIKEWLNLS 256
>gi|111220958|ref|YP_711752.1| glutamate racemase [Frankia alni ACN14a]
gi|111148490|emb|CAJ60161.1| Glutamate racemase [Frankia alni ACN14a]
Length = 306
Score = 296 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL V + + +P +Y+ D PYG +++ + ++D
Sbjct: 4 APVGVFDSGVGGLTVARAILDQLPHEPLVYLGDTGRAPYGPRPIAEVRRYALECLDRLVD 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA + R + +PA ++A A T+SG + ++ T AT+
Sbjct: 64 EG-VKLLVIACNTASAACLRDARERYSVPVVEVIMPATRRAVAATRSGRVGVIGTVATIG 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + V+ VE + ++ E + D
Sbjct: 123 SRAYDDAFTA-AAGVDLTGVACPAFVDFVERGITSGR----QLLGLTEAYLAPLQEADVD 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALF 251
++L CTHYPL+ V + V + +++ A+ +L R + H
Sbjct: 178 TVILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLARDGLFRDPDLPPPSHRFL 237
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P + R + G
Sbjct: 238 TTGDPTLFTRVGRRFLG 254
>gi|126656938|ref|ZP_01728116.1| glutamate racemase [Cyanothece sp. CCY0110]
gi|126621776|gb|EAZ92485.1| glutamate racemase [Cyanothece sp. CCY0110]
Length = 281
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 9/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++ +P+ +Y AD PYGN E + + + + + +
Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGNREASEILQFVREILAWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ ++ACNT+ L + +R F + LG + P K A Q I ++STPAT
Sbjct: 65 TGQNVKMVIMACNTSSALALEAVRQEF-DLPILGVILPGAKAAVK--QGKRIGVISTPAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + V +E+ +I + K+ +
Sbjct: 122 AKSQAYRQAIQEINPEAQVWQVGCPQFVPLIEQN----RIWDVYTKQVAQEYLSPLLAHD 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +V CTHY + + + + P + +D + + + A+ L + +
Sbjct: 178 IDTLVYGCTHYRHLEALIKTIIPGTIKLIDPASYVVQAAKKELELMGLSKISPASPTRFA 237
Query: 252 LSGKPDIAMRRLMQGFGL 269
+SG + R Q G
Sbjct: 238 VSGCSESFSRLSQQWLGY 255
>gi|300859076|ref|YP_003784059.1| glutamate racemase [Corynebacterium pseudotuberculosis FRC41]
gi|300686530|gb|ADK29452.1| Glutamate racemase [Corynebacterium pseudotuberculosis FRC41]
Length = 297
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 11/262 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I IFDSG+GGL V + + +P+ IY+ D PYG+ +++ M + +
Sbjct: 31 DASSPIGIFDSGVGGLTVARAIMEQLPQESVIYIGDTANSPYGSKPIAQVRELSMRIGDE 90
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
++ + + VIACNTA + +LR + S+ +G + PA+++A A T++G I +L T
Sbjct: 91 LVARG-CKMIVIACNTATSAALRDLRERY-SIPVVGVILPAVRRAVAATRNGKIGVLGTQ 148
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ L + ++ + S VE + +I +G +
Sbjct: 149 GTIASGAYQELFAA-SPGVEVYAQACPSFVSFVERGITSGR----QILGVTQGYTEGLQS 203
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---FD 246
D +VL CTHYPL+ V + V + +S+ + +L R +
Sbjct: 204 AGVDTLVLGCTHYPLLTGVIQLAVGDNVTLISSSEECVKDVLKVLSRNDMLAEATADKPP 263
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+ +G P + + M+ G
Sbjct: 264 SRSFESTGDPALFEQLAMRFLG 285
>gi|225575569|ref|ZP_03784179.1| hypothetical protein RUMHYD_03661 [Blautia hydrogenotrophica DSM
10507]
gi|225037202|gb|EEG47448.1| hypothetical protein RUMHYD_03661 [Blautia hydrogenotrophica DSM
10507]
Length = 273
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 10/253 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + +FDSGIGGL V +++ +P +Y D PYG+ + + + L
Sbjct: 6 EAPVGVFDSGIGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKDTVLRYSRQII-RFL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ V+ACNTA E++ ++ +G + A + AA T + + ++ T T
Sbjct: 65 ETENVKAIVVACNTASAFALSEIQKEM-NLPIIGVIEAGARVAAETTMNKKVGVIGTEGT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + S + ++ + VEE + E+ E E K
Sbjct: 124 IHSGIHERWLKSLDQEITVYGKPCPLFVPLVEEGWLKDPVTEE----IAERYLRELLEKE 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---H 248
D ++L CTHYPL+ + +++ V ++ + A + LL + N T + +
Sbjct: 180 VDTLILGCTHYPLLRSLIQKVVGPEVKLVNPAYETALELKKLLSQENLLSTGRGQEEFPY 239
Query: 249 ALFLSGKPDIAMR 261
++S + +
Sbjct: 240 RFYVSDLAEKFRK 252
>gi|21903447|sp|Q9XDZ7|MURI_CORGL RecName: Full=Glutamate racemase
Length = 273
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 112/269 (41%), Gaps = 10/269 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ P I IFDSG+GGL V + + +P IY+ D PYG +++
Sbjct: 1 MIERPVP-GADAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVRE 59
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + +++++ + VIACNTA + R + +PA+++A A T++G
Sbjct: 60 HAIRIADELVERG-CKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGK 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ ++ T T+ +L + ++ V+ VE + +I +
Sbjct: 119 VGVIGTVGTINSGAYQDLFSA-SPSIVVNAVACPRFVDFVERGITSGR----QILNIAQD 173
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ + D +VL CTHYPL+ V + V + +++ A+ +L + +
Sbjct: 174 YLEPLQAEGVDTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLAD 233
Query: 243 ---RVFDDHALFLSGKPDIAMRRLMQGFG 268
++ +G P+I + + G
Sbjct: 234 PDMHPEPSYSFESTGDPEIFAQLSRRFLG 262
>gi|84494378|ref|ZP_00993497.1| glutamate racemase [Janibacter sp. HTCC2649]
gi|84383871|gb|EAP99751.1| glutamate racemase [Janibacter sp. HTCC2649]
Length = 274
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG GGL V + + +P Y+ D PYG + + +
Sbjct: 2 PDSPIGIFDSGYGGLTVARAVLDQLPHESVAYLGDTARTPYGPRPIAETRAFALECLDRL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + VIACNTA + + R + PA+++A T++G I ++ST T
Sbjct: 62 V-NHGVKALVIACNTASAAVLHDARERYDVPVVEVIRPAVRRAVGATRTGRIGVISTLGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + VE G +E++ + +
Sbjct: 121 HQSRAYLDAFAA-APHLTVTSEPCPRFVDFVESGVTGG----EELRTVAREYLAPLQEQD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHA 249
D ++L CTHYPL+ V + V + +++ A+ +L + + +H
Sbjct: 176 VDTLILGCTHYPLLAGVISYVMGPDVTLVSSAEETAKELYRVLADADLLRPDHLPAPEHG 235
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+G P+ R ++ GL
Sbjct: 236 FTTTGDPEEFRRLALRFLGL 255
>gi|320539067|ref|ZP_08038738.1| glutamate racemase [Serratia symbiotica str. Tucson]
gi|320030705|gb|EFW12713.1| glutamate racemase [Serratia symbiotica str. Tucson]
Length = 287
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 85/261 (32%), Positives = 143/261 (54%), Gaps = 4/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ++L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S +
Sbjct: 24 PRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYTFDNVAFPYGEKSEEFIVERVLEITSAV 83
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ V+ +IACNTA T+ LR F S +G VPAIK AA +T +G++ +L+T T
Sbjct: 84 QQRHPMVMVIIACNTASTISLSALRERF-SFPVVGVVPAIKPAARFTANGIVGLLATRGT 142
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT LI + + C I L+ S L E G + +KK + K +
Sbjct: 143 VQRSYTHELIARFATDCKIELLGSSELVELAEAKLHGETVPLVTLKKILHPWL--KMSEP 200
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PL+ + P +D+ +IARR L+ + D+ A
Sbjct: 201 PDTVVLGCTHFPLLAEELTLVLPEGTRLVDSGAAIARRTAWLISTQENLLSTQEDNLAYC 260
Query: 252 LSGKPDI-AMRRLMQGFGLKS 271
++ + A+ ++Q +G K+
Sbjct: 261 MALDENTDALLPILQRYGFKT 281
>gi|126652650|ref|ZP_01724811.1| glutamate racemase [Bacillus sp. B14905]
gi|126590499|gb|EAZ84617.1| glutamate racemase [Bacillus sp. B14905]
Length = 265
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG ++ +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIMKRLPNETIYYIGDTARCPYGPRSRQEVRNFTWQ-MAKA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130
L+K + VIACNTA + + L+ P LG + A + A T+ + +L+T
Sbjct: 60 LEKMNVKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + HI ++ VE + K I + +
Sbjct: 119 TIKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKGEFA----TKLIAEGLKPLKNQ 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
+ D ++L CTHYP++ + V+ L +++ A+ + +L T H
Sbjct: 175 QFDTVILGCTHYPILQKQIEAVVGDEVNVLSSAEETAKDVQEMLAYNGTLANANTVPAHK 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 235 FFATGSVPIFRSIAENWL 252
>gi|282891233|ref|ZP_06299736.1| hypothetical protein pah_c048o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498926|gb|EFB41242.1| hypothetical protein pah_c048o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 280
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I +FDSGIGGL V++ + L+P +Y D FPYGN + + + ++
Sbjct: 10 NNPIGMFDSGIGGLTVMRAVMQLLPYESVLYFGDTAHFPYGNNAAETIIQYSLANAHFLM 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ L VIACNTA L+ F + + + P+I+ A A TQSG I++L T T
Sbjct: 70 EQ-DIKLLVIACNTASAFAFSTLQDQF-LIPIIDVISPSIEAAIAQTQSGSIAVLGTKGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R I + Q + ++ +LA VEE ++ + ++ +
Sbjct: 128 IRSGVYKQKILDLMPQARVVSLACPLLAPLVEEQW----LEHPATRLIVQEYLQPLKKSD 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D ++L CTHYPL+ + + V +D++ + A + +L + H
Sbjct: 184 VDTLILGCTHYPLLKSLIEEEMEGQVKIIDSASACALKVEEILGNQQLQSLKEKTPHFRY 243
Query: 251 FLSGKPDIAMRRLMQGF 267
++S P+ + Q
Sbjct: 244 YVSDDPERFQQAGEQFL 260
>gi|311281559|ref|YP_003943790.1| glutamate racemase [Enterobacter cloacae SCF1]
gi|308750754|gb|ADO50506.1| glutamate racemase [Enterobacter cloacae SCF1]
Length = 283
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 80/265 (30%), Positives = 139/265 (52%), Gaps = 6/265 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ +
Sbjct: 17 PSDPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSESFIVERVVEIV 76
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T
Sbjct: 77 TAVQARYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLAT 135
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R YT LI + ++C I ++ S L E G + +E+++ + E
Sbjct: 136 RGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMPE 195
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+PL+ + P +D+ +IARR LL +
Sbjct: 196 P--PDTVVLGCTHFPLLQEELLAVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANI 253
Query: 249 ALF--LSGKPDIAMRRLMQGFGLKS 271
A L+ + + +++ +G ++
Sbjct: 254 AFCMALTAETEQLF-PVLRRYGFET 277
>gi|189485683|ref|YP_001956624.1| glutamate racemase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287642|dbj|BAG14163.1| glutamate racemase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 275
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 63/257 (24%), Positives = 113/257 (43%), Gaps = 9/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG GGL V+ + ++P IY D PYG+ + K + S ++
Sbjct: 12 NHPIGIFDSGFGGLTVMSAITKMLPLESLIYFGDTAHVPYGSKSKDIVIKYSKEITSFLM 71
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + L VIACNTA L+ T + +G + P K A +++ I I+ T T
Sbjct: 72 -RCKVKLIVIACNTASAFALSILQKTLK-VPVIGVIEPGSKAAVYASKNKKIGIIGTEGT 129
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I+ S+ ++ + + VEE +I + +KK IE K+
Sbjct: 130 INSKSYLREINRI-SKSKVYQQACPLFVPLVEEGWSSGEITDSIVKKYIEPLL----NKK 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTHYPL+ + + V ++D++ ++++ + +L +
Sbjct: 185 IDTLVLGCTHYPLLRETLEKNAGGNVVFIDSAKAVSQEVKNILKKTCILADVKGKKFLKF 244
Query: 251 FLSGKPDIAMRRLMQGF 267
++S P+ + F
Sbjct: 245 YVSDNPEKFQTIGSRFF 261
>gi|154484251|ref|ZP_02026699.1| hypothetical protein EUBVEN_01963 [Eubacterium ventriosum ATCC
27560]
gi|149734728|gb|EDM50645.1| hypothetical protein EUBVEN_01963 [Eubacterium ventriosum ATCC
27560]
Length = 270
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 102/255 (40%), Gaps = 8/255 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+I +FDSG+GGL V +++ +PE Y D PYG+ + + +
Sbjct: 1 MNDKNAAIGVFDSGVGGLTVAREIIRQLPEESITYFGDTARVPYGSKSKDTIIRYSRQII 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L V+ACNTA D + + +G V P K A T++ I I+
Sbjct: 61 -RFLKTKNVKAIVVACNTASAFALDTIEKEI-DIPIIGVVKPGAKSAVESTKNKRIGIIG 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + IHS + + + + VEE + ++ + +E
Sbjct: 119 TEGTIKSELYTQYIHSIDPEITVVGKACPLFVPLVEEGMLHDSVTDEVASRYLES----M 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
+ + D ++L CTHYPL+ ++ V+ ++ + A LL + +
Sbjct: 175 KEENIDSLILGCTHYPLLRSTVGKIMGPEVNLVNPAYETAISLDGLLRQNGIRADKDAKP 234
Query: 247 DHALFLSGKPDIAMR 261
++ ++S +
Sbjct: 235 EYEFYVSDAEEKFKE 249
>gi|295092631|emb|CBK78738.1| glutamate racemase [Clostridium cf. saccharolyticum K10]
Length = 271
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 10/251 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V +++ MPE +Y D PYG + + + L
Sbjct: 4 NAPIGVFDSGVGGLTVAREIMRQMPEEKLVYFGDTARVPYGTKSQETVIRYSRQII-RFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNTA + + + +G + A K A T++ I I+ T AT
Sbjct: 63 RTKEVKAIVIACNTATACALETV-EKDLDIPIIGVIHAGAKAAVEATKNRKIGIIGTEAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + L+ + + VEE + ++ + K
Sbjct: 122 IRSGVYTELMKQMNPAIEVTGKPCPLFVPLVEEGLLHDSVTDE----IASRYLASLKEKY 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDH 248
D +V+ CTHYPL+ +L V ++ + AR + LL + +
Sbjct: 178 IDTLVMGCTHYPLLRSTLARLMGEEVTLINPAYETARELKSLLGEKELTCIPGEAGGEKY 237
Query: 249 ALFLSGKPDIA 259
F+S +
Sbjct: 238 QFFVSDMAERF 248
>gi|67921667|ref|ZP_00515185.1| Glutamate racemase [Crocosphaera watsonii WH 8501]
gi|67856779|gb|EAM52020.1| Glutamate racemase [Crocosphaera watsonii WH 8501]
Length = 281
Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 9/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++ +P+ +Y AD PYG+ + + + + + +
Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGDRSAREILEFVREILAWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + + ++ACNT+ L + +R F + LG + P K A Q I ++STPAT
Sbjct: 65 TQQRVKMVIMACNTSSALAVEAVRQEF-DLPILGVILPGAKAAVK--QGQRIGVISTPAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + V +E+ + E+ +E
Sbjct: 122 AKSQAYRQAIQEINPNAQVWQVGCPPFVPLIEQN-RLWDVHTKEVARE---YLTPLLAHN 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +V CTHY + V + + P V +D + + + A+ L + +T
Sbjct: 178 IDTLVYGCTHYRHLEPVIKTIIPTTVKLVDPASYVVQAAKKELELMGLSKTAPALPTRFA 237
Query: 252 LSGKPDIAMRRLMQGFGL 269
+SG + Q G
Sbjct: 238 VSGCSSTFSQLSKQWLGY 255
>gi|320159866|ref|YP_004173090.1| glutamate racemase [Anaerolinea thermophila UNI-1]
gi|319993719|dbj|BAJ62490.1| glutamate racemase [Anaerolinea thermophila UNI-1]
Length = 273
Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 6/254 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R LMP IY+AD PYG ++ + ++ +
Sbjct: 2 IGVFDSGVGGLSVLRAIRALMPAEPVIYLADQAHVPYGPRPLEEVRGFSQSIARFLIAQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V V+ACNTA LR TFP F+G PA+K AA TQSG++ +L+TPAT +
Sbjct: 62 ARV-IVVACNTASAAALFHLRQTFPETPFVGMEPAVKPAAETTQSGVVGVLATPATFQGA 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
++++ + + + L ++E + +E ++ +E + + D +
Sbjct: 121 LYASVVERFAQGVTLLQDTCAGLVQQIEAG----NLAGEETRRILENALLPMLARGMDTV 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSG 254
V+ CTHYP ++ + +Q+ V +D + ++AR+ R +L + +G
Sbjct: 177 VMGCTHYPFVIPLIQQIVGEQVRVIDPAPAVARQTRRVLEAHGWLVEGNQPAPVRFLTTG 236
Query: 255 KPDIAMRRLMQGFG 268
+ R + Q G
Sbjct: 237 DGEAFRRMIRQLLG 250
>gi|331002651|ref|ZP_08326166.1| glutamate racemase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330407064|gb|EGG86568.1| glutamate racemase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 267
Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 8/251 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL V +++ MP+ +Y D PYG+ + K +
Sbjct: 1 MNLPIGIFDSGVGGLTVAKEIVAQMPDESTVYFGDTARVPYGSKSGDTIIKYSRQIV-KF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130
L VIACNTA D L++ + +G + A A T+ G I ++ T
Sbjct: 60 LQTKNVKAIVIACNTASAFALDILKTEI-DIPIMGVIHAGAVTAIKTTKVGRIGVVGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ I ++ + + +L VE+ ++ ++ I + + E + +
Sbjct: 119 TISSGIYKKTIQDINNELEVIQKACPLLVPLVEDGLINDRVTDEIISRYV----SELKSR 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
D +VL CTHYPL+ F ++ V ++ + A+ + LL + N T+ H
Sbjct: 175 HIDSLVLGCTHYPLLYKTFGRIMGEGVSLVNPAYETAKELKSLLEQKNLCATKDGGIFHD 234
Query: 250 LFLSGKPDIAM 260
++S +
Sbjct: 235 FYVSDMAERFS 245
>gi|254415880|ref|ZP_05029637.1| glutamate racemase [Microcoleus chthonoplastes PCC 7420]
gi|196177307|gb|EDX72314.1| glutamate racemase [Microcoleus chthonoplastes PCC 7420]
Length = 287
Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 13/271 (4%)
Query: 3 IDNYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
+ N P + I +FDSG+GGL VL+++ +P +Y AD PYG
Sbjct: 1 MTNDPILTLRGEAQHRRIGVFDSGVGGLTVLRELYRQLPHESILYFADTARLPYGTRSPR 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY 117
+ + + + ++++ + V+ACNT+ L D LR F + LG + P + A
Sbjct: 61 EIIQFGREILTWMVEQ-DVKMVVLACNTSDALALDTLRREF-QLPILGLILPGSRAAVQV 118
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ I +++TPAT + + VS VE+ +
Sbjct: 119 GR--RIGVIATPATAASNAYRRALLEVEPTAQVWQVSCPEFVPLVEQNRLYEPYTSEVAL 176
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
+ + +R D ++ CTHYPL+ V RQ+ P V +D ++ + A L +
Sbjct: 177 QYLTPLLQ----QRIDTLIYGCTHYPLLAPVLRQILPASVQLIDPAEHVVAAAAQELDLM 232
Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ +SG P + +Q G
Sbjct: 233 GLKNSSPPLPTRFCVSGCPQQFAKLSVQWLG 263
>gi|289551045|ref|YP_003471949.1| Glutamate racemase [Staphylococcus lugdunensis HKU09-01]
gi|289180577|gb|ADC87822.1| Glutamate racemase [Staphylococcus lugdunensis HKU09-01]
Length = 266
Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K L + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDIARCPYGPRPGDEVKAFTTELANKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ S+ +G + P + A T++ + IL T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEHLQ-HILSIPVIGVIEPGARTAIMTTKNQHVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I + V+ VE+ I I
Sbjct: 119 TIKSEAYRHHIKRINPNVEVTGVACPGFVPLVEQMRYNDPTITSII---IHQTLKHWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 176 IADTVILGCTHYPLLYQPLNDYFGGDKTVISSGLETAREVSALLTFSNEHASYTAQPQHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G + + +K
Sbjct: 236 FFSTGDTTHITNIIAEWLHMK 256
>gi|310766063|gb|ADP11013.1| glutamate racemase [Erwinia sp. Ejp617]
Length = 283
Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats.
Identities = 86/265 (32%), Positives = 145/265 (54%), Gaps = 6/265 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
L+ ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ +
Sbjct: 16 APSVLRPTVLIFDSGVGGLSVYNEIRALLPDLHYLYAFDNVAFPYGEKSEEFIVERVVAI 75
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+
Sbjct: 76 VTAVTRLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLA 134
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++R YT LI + +C ++ S L E G + +E+++ ++
Sbjct: 135 TRGTVKRPYTHELIARFAGECKTEMLGSGELVEIAEAKLHGQPVALEEVRRILQPWLRMP 194
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+
Sbjct: 195 EP--PDTVVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPEALSADDN 252
Query: 248 HALFLSGKPDIAMR--RLMQGFGLK 270
AL + G + A++ ++Q +G K
Sbjct: 253 MALCM-GITEQAVQLIPVLQRYGFK 276
>gi|73662954|ref|YP_301735.1| glutamate racemase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123642328|sp|Q49WR7|MURI_STAS1 RecName: Full=Glutamate racemase
gi|72495469|dbj|BAE18790.1| glutamate racemase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 269
Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 7/262 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P Y+ D PYG+ E +++ L +
Sbjct: 1 MEKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIERCPYGSREGSEVRQFTTELAQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ + + VIACNTA + + L++ P + +G + P + A T++ + IL T
Sbjct: 61 MT-FDIKMLVIACNTATAVALNHLQNILP-IPVIGVIEPGARTAIMTTKNNDVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I + + ++ A VE+ I I I
Sbjct: 119 TIKSEAYRHHIKAINPNVEVTGIACPSFAPMVEQMRYKDPIITSII---IHQNLKHWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 176 NADTVILGCTHYPLLYQPINDYFGGEKTVISSGLETAREVSALLTFSNEHAGYQRQPKHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
F++G+ + R + + + +
Sbjct: 236 FFVTGETEYIERIITEWLNISA 257
>gi|152988174|ref|YP_001350643.1| glutamate racemase [Pseudomonas aeruginosa PA7]
gi|166231048|sp|A6VC58|MURI_PSEA7 RecName: Full=Glutamate racemase
gi|150963332|gb|ABR85357.1| glutamate racemase [Pseudomonas aeruginosa PA7]
Length = 265
Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L
Sbjct: 5 SAPVGVFDSGVGGLSVLREIRARLPAESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 65 ERGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLHGARTRALLERLLGPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPADIAVIDTGAAVARQLERVLSTRALLASGQAAAPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|254819168|ref|ZP_05224169.1| glutamate racemase [Mycobacterium intracellulare ATCC 13950]
Length = 271
Score = 294 bits (755), Expect = 6e-78, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL V + + +P+ IYV D PYG ++ + + D++
Sbjct: 6 APVGVFDSGVGGLTVARAIIDQLPDEDIIYVGDTGHGPYGPLTIPDVRAHALAIGDDLVG 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKAL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTQATIN 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I V+ VE + ++ EG + + D
Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251
+VL CTHYPL+ + + V + +++ A+ +L + +
Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGEHVTLVSSAEETAKEVLRVLTERDLLRPHDAPPATRVFE 239
Query: 252 LSGKPDIAMRRLMQGFG 268
+G PD R + G
Sbjct: 240 ATGDPDAFTRLAARFLG 256
>gi|86607856|ref|YP_476618.1| glutamate racemase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556398|gb|ABD01355.1| glutamate racemase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 287
Score = 294 bits (755), Expect = 6e-78, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 105/274 (38%), Gaps = 18/274 (6%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E I +FDSG+GGL V + +R +P+ IY D PYG + + +
Sbjct: 7 SEPDPSWPIGVFDSGLGGLTVWRALRRRLPQERLIYFGDTARLPYGERSPEEILAFVRQI 66
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + L V+ACNT+ L D +R F ++ LG + QAA Q I +L+
Sbjct: 67 LTWM-QAQPVKLVVMACNTSSALALDHVRQEF-ALPVLGLILPGAQAALA-QGSRIGVLA 123
Query: 128 TPATLRRTYTSNLIHSYVS--------QCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
T AT++ S I Y + + + +E + +++
Sbjct: 124 TVATVKSRAYSRAIQEYSALDPKRFPYPVYCWEQACPEFVPLIEAGW----LDSPALRQA 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
E + D +V CTHYPL+ + + L P V +D ++ L
Sbjct: 180 AERYLQPLLQQGIDTLVYGCTHYPLLDPILKPLLPSSVKRVDPGMALVGSLARELSLWGL 239
Query: 240 HQTRVF---DDHALFLSGKPDIAMRRLMQGFGLK 270
+ + H +SG P+ + G +
Sbjct: 240 RRPSTAAQEEPHRFCVSGDPERFAQLATPWLGFR 273
>gi|325284166|ref|YP_004256707.1| Glutamate racemase [Deinococcus proteolyticus MRP]
gi|324315975|gb|ADY27090.1| Glutamate racemase [Deinococcus proteolyticus MRP]
Length = 365
Score = 294 bits (755), Expect = 6e-78, Method: Composition-based stats.
Identities = 74/276 (26%), Positives = 116/276 (42%), Gaps = 26/276 (9%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL ++R +P+ F Y+AD PYG D ++ RL + L
Sbjct: 5 APIGVFDSGVGGLSVLAELRRALPDERFCYLADTAHLPYGTRSDDDIR-RLTEAAARWLH 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
V+ACNTA LR TFP +G VPA+K AA T+SG+I +++TPATLR
Sbjct: 64 GRGCKALVVACNTASAYGLQHLRGTFPEWPVVGLVPAVKPAALNTRSGVIGVMATPATLR 123
Query: 134 RTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + L +S L VE + + +
Sbjct: 124 GSKLQQSVAEWAAPRGVQVMLTTSPKLVPLVERGEA----DSPDARALLRQLLRPLAEAG 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-------- 243
D +VL CTHYP + R+ +D+ ++AR+ +L
Sbjct: 180 ADQLVLGCTHYPFLSGSIRREFKDQFTLVDSGGAVARQTARVLAERGLLAPAAEPSSTPQ 239
Query: 244 -----------VFDDHALFLSGKPDIAMRRLMQGFG 268
+++G P A + ++Q G
Sbjct: 240 PSSPQPTSLQLASPQVEYYVTGDPQAAQQIMLQLLG 275
>gi|1709187|sp|P52974|MURI_STAHA RecName: Full=Glutamate racemase
gi|520574|gb|AAA20474.1| glutamate racemase [Staphylococcus haemolyticus]
gi|1093233|prf||2103194B Glu racemase
Length = 266
Score = 294 bits (755), Expect = 6e-78, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 99/258 (38%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ L + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGDEVKQFTTQLANKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ ++ + VIACNTA + + L+ P + +G + P + A T++ + IL T
Sbjct: 61 M-QFDIKMLVIACNTATAVALEHLQQMLP-IPVIGVIEPGSRTAIMTTKNQNVLILGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I H+ VE+ + I +
Sbjct: 119 TIKSEAYRHHIKHINPNVHVLWCGLPGFVPLVEQMRYDDPTITSIV---IHQTLKQWRNT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D I+L CTHYPL+ + + AR LL N H + +H
Sbjct: 176 DADTIILGCTHYPLLYKPINDYFGGEKKVISSGLETAREVSALLTFSNEHASYTQHPEHR 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G ++Q
Sbjct: 236 FFATGDTVHIKNIILQWL 253
>gi|283796789|ref|ZP_06345942.1| glutamate racemase [Clostridium sp. M62/1]
gi|291075679|gb|EFE13043.1| glutamate racemase [Clostridium sp. M62/1]
gi|295115201|emb|CBL36048.1| glutamate racemase [butyrate-producing bacterium SM4/1]
Length = 271
Score = 294 bits (755), Expect = 7e-78, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 97/251 (38%), Gaps = 10/251 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V +++ MPE +Y D PYG + + + +
Sbjct: 4 NAPIGVFDSGVGGLTVAREIMRQMPEEKLVYFGDTARVPYGTKSQETVIRYSRQIIRFLR 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
K + VIACNTA + + + +G + A + A T++ I I+ T AT
Sbjct: 64 TK-EVKAIVIACNTATACALETV-EKDLDIPIIGVIHAGARAAVEATKNRKIGIIGTEAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + L+ + + VEE + ++ + K
Sbjct: 122 IRSGVYTELMKQMNPAIEVTGKPCPLFVPLVEEGLLHDSVTDE----IASRYLASLKEKY 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDH 248
D +V+ CTHYPL+ +L V ++ + AR + LL + +
Sbjct: 178 IDTLVMGCTHYPLLRSTLARLMGEEVTLINPAYETARELKSLLGEKELTCIPGEAGGEKY 237
Query: 249 ALFLSGKPDIA 259
F+S +
Sbjct: 238 QFFVSDMAERF 248
>gi|85060131|ref|YP_455833.1| glutamate racemase [Sodalis glossinidius str. 'morsitans']
gi|123518781|sp|Q2NQZ7|MURI_SODGM RecName: Full=Glutamate racemase
gi|84780651|dbj|BAE75428.1| glutamate racemase [Sodalis glossinidius str. 'morsitans']
Length = 290
Score = 294 bits (755), Expect = 7e-78, Method: Composition-based stats.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 7/263 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL+FDSG+GGL + ++R +P H++YV D+ FPYG + + R++ + +
Sbjct: 25 RPTILVFDSGVGGLSIYNEVRQTLPNAHYLYVFDNEAFPYGEKPEQFIVDRVVAIVGAMW 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++ L ++ACNTA T+ LR FP +G VPAIK AA T++G++ +L+T AT+
Sbjct: 85 RQHKIDLVIVACNTASTISLPALRERFPC-PIIGVVPAIKPAARLTRNGIVGLLATRATV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT +LI Y C I + + L E G + ++K + + +
Sbjct: 144 QRSYTHDLISQYAGDCQILQLGTAELVDMAEARLHGELVPLPVLRKLLRPWL--RAAEPP 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRVFDDHA 249
D +VL CTH+PL+ + + P +D+ +IARRA L+ +++ Q +
Sbjct: 202 DTVVLGCTHFPLLSQELQAVLPEGTRLVDSGSAIARRAAWLVEHDMDVSSLQGETGPNKT 261
Query: 250 LF-LSGKPDIAMRRLMQGFGLKS 271
++ +A+ + +G S
Sbjct: 262 YCLVTTPQAVALMPALTRYGFGS 284
>gi|159900727|ref|YP_001546974.1| glutamate racemase [Herpetosiphon aurantiacus ATCC 23779]
gi|229486239|sp|A9AXC6|MURI_HERA2 RecName: Full=Glutamate racemase
gi|159893766|gb|ABX06846.1| glutamate racemase [Herpetosiphon aurantiacus ATCC 23779]
Length = 254
Score = 294 bits (755), Expect = 7e-78, Method: Composition-based stats.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 7/251 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL L+ +R L+P IY AD PYG + L + IL
Sbjct: 3 DQPIGMFDSGVGGLSTLRDLRALLPHEDIIYYADTGNCPYGGRSHEEIVA-LSERITYIL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA D LR F S++F+G P IK A A T++G++ +++T AT+
Sbjct: 62 LERGVKLIVVACNTATLHAVDYLREHF-SISFVGMEPGIKPAIAQTKTGVVGVMATQATV 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
LI Y + + L +E + D + + +
Sbjct: 121 AGERFQRLIARYAGDVQVVPQACPGLVELIEAGELQSETTRDAVARYVAPLL----KAGA 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D IVL CTHYP + + ++ V LD ++AR+ + LL + +
Sbjct: 177 DTIVLGCTHYPFLRSLIADVAGPNVALLDTGAAVARQTQRLLAAADLLNPQTSQGSIEWL 236
Query: 252 LSGKPDIAMRR 262
SG P +
Sbjct: 237 TSGDPAHFAKI 247
>gi|242241176|ref|YP_002989357.1| glutamate racemase [Dickeya dadantii Ech703]
gi|242133233|gb|ACS87535.1| glutamate racemase [Dickeya dadantii Ech703]
Length = 295
Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats.
Identities = 83/259 (32%), Positives = 140/259 (54%), Gaps = 4/259 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ S+LIFDSG+GGL V +++R L+P+ H+IY D+ FPYG + + +R++ + +
Sbjct: 22 ARPSVLIFDSGVGGLSVYEEIRKLLPDLHYIYTFDNEAFPYGEKPEQFIIERVVSIVDAV 81
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ VIACNTA T+ LR+ F + +G VPAIK AA T++G++ +L+T AT
Sbjct: 82 EKQHPLSAVVIACNTASTISLPALRARF-NFPVVGVVPAIKPAAKLTRNGVVGLLATRAT 140
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + C I + S L E G ++ D ++K ++ K +
Sbjct: 141 VQRPYTHELISRFAHDCTILSLGSSELVEWGEAKLQGDEVPIDALRKILKPWL--KLPEP 198
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PL+ + +Q P +D+ +IARR L+ + +
Sbjct: 199 PDTVVLGCTHFPLLANELQQALPEGTRLVDSGAAIARRTAWLVKHLENPFLSKEKNLVYC 258
Query: 252 LSGKPDIA-MRRLMQGFGL 269
L+ P +A + ++Q +G
Sbjct: 259 LAITPKVATLWPVLQRYGF 277
>gi|299535537|ref|ZP_07048858.1| glutamate racemase [Lysinibacillus fusiformis ZC1]
gi|298728737|gb|EFI69291.1| glutamate racemase [Lysinibacillus fusiformis ZC1]
Length = 265
Score = 294 bits (754), Expect = 8e-78, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG ++ +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIMKRLPNETIYYIGDTARCPYGPRSRQEVRNFTWQ-MAKA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130
L+K + VIACNTA + + L+ P LG + A + A T+ + +L+T
Sbjct: 60 LEKMNVKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + HI ++ VE + I + +
Sbjct: 119 TIKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKGDFANN----LIAEGLKPLKNR 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
+ D ++L CTHYP++ + V+ L +++ A+ + +L T H
Sbjct: 175 QFDTVILGCTHYPILQKQIEAVVGEDVNVLSSAEETAKDVQEMLAYNGTLANANAVPAHR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 235 FFATGSVPIFRSIAENWL 252
>gi|294789006|ref|ZP_06754246.1| glutamate racemase [Simonsiella muelleri ATCC 29453]
gi|294483108|gb|EFG30795.1| glutamate racemase [Simonsiella muelleri ATCC 29453]
Length = 272
Score = 294 bits (754), Expect = 8e-78, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 12/270 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + + I +FDSG+GGL V++ + +P + +Y D PYG + +
Sbjct: 1 MIM----MSPNNEKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTI 56
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQ 119
++ + +L + + VIACNT + ++ +M + + A QAA A T+
Sbjct: 57 EEFTAQIVEFLL-QNEVKALVIACNTIAAVAYKRVQQMVGNMPIISVIEAGAQAALATTR 115
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I +++T T+ + IH+ I +S IL VEE ++ +++
Sbjct: 116 NNHIGVIATSTTVNSNAYARAIHAQNPDTRILSQASPILVPLVEEGWLDHEVTRLTVREY 175
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRIN 238
++ E D +VL CTHYPL+ + ++ + ++ +D+S + A + LL
Sbjct: 176 LKPILAE----DVDTLVLGCTHYPLLKPLIKKEA-NTLELVDSSITTAEATAQALLDAHL 230
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ ++ D+ ++S P + G
Sbjct: 231 LNTSQQMPDYRFYVSDIPLRFQTIGERFLG 260
>gi|116512125|ref|YP_809341.1| glutamate racemase [Lactococcus lactis subsp. cremoris SK11]
gi|123025382|sp|Q02YQ3|MURI_LACLS RecName: Full=Glutamate racemase
gi|116107779|gb|ABJ72919.1| glutamate racemase [Lactococcus lactis subsp. cremoris SK11]
Length = 271
Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 17/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V +++ +P +Y+ D PYG +
Sbjct: 1 MDNRP--------IGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIA 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K + V+ACNTA + + ++ + +G + P A T++
Sbjct: 53 FTWDMVNFLLSK-NVKMIVMACNTATAMTLEIVKEEL-DIPVIGVILPGASSAIQKTKTN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T A++R I S + ++ S VE +++ + K+ +
Sbjct: 111 KIGVIATQASIRSDEYHKTIARKSSAIEVLSLACPKFVSIVESN----EMESEIAKRVVS 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
GK D ++L CTHYPL+ + ++ V +D+ R LL +
Sbjct: 167 ESLAPLVGK-IDTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLLNYFEINA 225
Query: 242 -TRVFDDHALFLSGKPDIAMRRLMQGFGL 269
R H + + + + +
Sbjct: 226 HERKEYQHCFYTTAGVNSFREIAEKWLNI 254
>gi|41408522|ref|NP_961358.1| glutamate racemase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|81571208|sp|Q73X85|MURI_MYCPA RecName: Full=Glutamate racemase
gi|41396878|gb|AAS04741.1| MurI [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 275
Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 12/261 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ IFDSG+GGL V + + +P+ H IYV D PYG ++ + + D++
Sbjct: 6 APVGIFDSGVGGLTVARAIIDQLPDEHIIYVGDTGHGPYGPLSIPEVRAHALAIGDDLVG 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKAL-VIACNTASAACLRDARERYEVPVVEVILPAVRRAVATTRNGRIGVIGTQATIN 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I V+ VE + ++ EG + + D
Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---- 249
+VL CTHYPL+ + + V + +++ A+ +L + D A
Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGDNVTLVSSAEETAKEVLRVLAERDLLHPHPDDPRAAGPS 239
Query: 250 --LFLSGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 240 RVFEATGDPEAFTRLAARFLG 260
>gi|304391421|ref|ZP_07373363.1| glutamate racemase [Ahrensia sp. R2A130]
gi|303295650|gb|EFL90008.1| glutamate racemase [Ahrensia sp. R2A130]
Length = 260
Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats.
Identities = 120/255 (47%), Positives = 174/255 (68%), Gaps = 2/255 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL VL++ R LMP + F+YVADD FPYG+WE AL +R+M +F D++ +
Sbjct: 2 TVLVFDSGLGGLSVLREARILMPGHRFVYVADDAAFPYGDWEAEALVERMMEVFEDLVTR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++P + ++ACNTA T+I LRS F +G VPAIK AA T SG IS+L+TP T++R
Sbjct: 62 FEPSMIIVACNTASTIILPHLRSRF-DFPVVGTVPAIKLAAELTASGHISVLATPGTVQR 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT +LI + S ++ LV + +A E + + + +K EIE CF+++ G RTDV
Sbjct: 121 DYTRSLISEFASTVNVRLVGAEKMAGLAEHFMLTGETDTEAVKSEIEDCFVDQYGARTDV 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VLACTHYP + +V+R+L+PWPVDWL+ +++IAR A+ LLP + D A F G
Sbjct: 181 VVLACTHYPFLTNVYRRLAPWPVDWLNPAEAIARHAKSLLP-DGDQPVKPIQDLAHFTGG 239
Query: 255 KPDIAMRRLMQGFGL 269
KPD+ +RL+ GFGL
Sbjct: 240 KPDVLRQRLLSGFGL 254
>gi|118465713|ref|YP_880790.1| glutamate racemase [Mycobacterium avium 104]
gi|254774375|ref|ZP_05215891.1| glutamate racemase [Mycobacterium avium subsp. avium ATCC 25291]
gi|166231040|sp|A0QD02|MURI_MYCA1 RecName: Full=Glutamate racemase
gi|118167000|gb|ABK67897.1| glutamate racemase [Mycobacterium avium 104]
Length = 275
Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 12/261 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ IFDSG+GGL V + + +P+ H IYV D PYG ++ + + D++
Sbjct: 6 APVGIFDSGVGGLTVARAIIDQLPDEHIIYVGDTGHGPYGPLSIPEVRAHALAIGDDLVG 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKAL-VIACNTASAACLRDARERYEVPVVEVILPAVRRAVATTRNGRIGVIGTQATIN 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I V+ VE + ++ EG + + D
Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---- 249
+VL CTHYPL+ + + V + +++ A+ +L + D A
Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGDNVTLVSSAEETAKEVLRVLTERDLLHPHPDDPRAAGPS 239
Query: 250 --LFLSGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 240 RVFEATGDPEAFTRLAARFLG 260
>gi|227504002|ref|ZP_03934051.1| glutamate racemase [Corynebacterium striatum ATCC 6940]
gi|227199396|gb|EEI79444.1| glutamate racemase [Corynebacterium striatum ATCC 6940]
Length = 258
Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 7/261 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + +P IY+ D PYG +++ +
Sbjct: 1 MPDATSPIGIFDSGVGGLTVARTIIEQLPNESVIYIGDTEHSPYGPRPIAEVRELSTKIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+++++ + VIACNTA + R + PA+++A A T++G I ++ T
Sbjct: 61 DELVERG-CKMIVIACNTATAAFLHDARERYDIPVVEVIRPAVRRAIATTRNGKIGVIGT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ +L + H V+ VE + +I EG +
Sbjct: 120 EGTVNSGAYQDLF-AVNPHVEAHAVACPDFVGFVERGITAGR----QILGVAEGYLAPLQ 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTHYPL+ V + V + +++ A+ L + +
Sbjct: 175 SVGVDTLVLGCTHYPLLTGVIQLAMGDNVTLVSSAEETAKDVMRTLTETDMLAPEGQEAV 234
Query: 249 ALF-LSGKPDIAMRRLMQGFG 268
F +G P+ R + G
Sbjct: 235 RKFESTGDPETFSRLATRFLG 255
>gi|296170277|ref|ZP_06851868.1| glutamate racemase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895000|gb|EFG74719.1| glutamate racemase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 271
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++
Sbjct: 6 APVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGHGPYGPLTIPEVRAHALAIGDDLVG 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKAL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTQATIN 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V+ VE + ++ EG + + D
Sbjct: 125 SHAYQDAFAA-ARDTEVTAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251
+VL CTHYPL+ + + V + +++ A+ +L + +
Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGEQVTLVSSAEETAKEVLRVLTERDLLRAHEAPPATRVFE 239
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ + + G
Sbjct: 240 ATGDPEAFTKLAARFLG 256
>gi|317151766|ref|YP_004119814.1| glutamate racemase [Desulfovibrio aespoeensis Aspo-2]
gi|316942017|gb|ADU61068.1| glutamate racemase [Desulfovibrio aespoeensis Aspo-2]
Length = 279
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 112/267 (41%), Gaps = 7/267 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E + I +FDSG+GGL VL+ +R MP +Y+ D PYG + + +
Sbjct: 1 MENAAKLPIGMFDSGVGGLTVLRALRERMPCEDVVYLGDTARLPYGTKSPQTVSRYAVQC 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
++++ + + L V+ACNTA + LR +P + +G V P + A T++ I ++
Sbjct: 61 AAELVRR-EIKLLVVACNTASAVAIGPLREAYPGIPVIGVVEPGAQAACRATRNQAIGVI 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT+ IH+ + I + + EE + E + + F
Sbjct: 120 ATEATIAGGAYHRAIHAIAPEARIVGHPCQLFVALAEEGWIDGPVAEGVAARYLHPVFRP 179
Query: 187 KEGKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
G D +VL CTH+PL+ R + V +D++ + A L R+N +
Sbjct: 180 ASGTESPVIPDTLVLGCTHFPLLAPAIRSVLDPSVVIVDSAATTAETVYAELARLNLGRP 239
Query: 243 RVF-DDHALFLSGKPDIAMRRLMQGFG 268
D A + R + G
Sbjct: 240 GTGCGDTAYLTTDDAARFARTGTRFLG 266
>gi|46579181|ref|YP_009989.1| glutamate racemase [Desulfovibrio vulgaris str. Hildenborough]
gi|120603245|ref|YP_967645.1| glutamate racemase [Desulfovibrio vulgaris DP4]
gi|46448594|gb|AAS95248.1| glutamate racemase [Desulfovibrio vulgaris str. Hildenborough]
gi|120563474|gb|ABM29218.1| glutamate racemase [Desulfovibrio vulgaris DP4]
gi|311233019|gb|ADP85873.1| glutamate racemase [Desulfovibrio vulgaris RCH1]
Length = 282
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 9/260 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ + I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + S
Sbjct: 4 EQARLPIGLFDSGVGGLTVLKALRQRMPCEDMLYLGDTARLPYGTKSSETIARYALQATS 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
++++ L V+ACNTA ++ D LR +P + +G V P + + + G I++++T
Sbjct: 64 KLVERR-IKLLVVACNTATSVALDTLREAYPGIPVIGVVEPGAQASCRASLQGRIAVIAT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+T+R IH Q HI + + EE I E + ++ F
Sbjct: 123 ESTIRGRAYHKAIHRLRPQAHIVGQACPLFVPLAEEGWVDGPIAESIAARYLDPIFKPAS 182
Query: 189 GKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
G D +VL CTH+PL+ R + V +D++ + A L +
Sbjct: 183 GSDRVETPDCLVLGCTHFPLLARAIRNVIGPDVVIVDSAATTAFAVHQELDARGLIHPQH 242
Query: 245 FDD---HALFLSGKPDIAMR 261
DD + R
Sbjct: 243 GDDCGTTRFLTTDDVPRFAR 262
>gi|288940398|ref|YP_003442638.1| glutamate racemase [Allochromatium vinosum DSM 180]
gi|288895770|gb|ADC61606.1| glutamate racemase [Allochromatium vinosum DSM 180]
Length = 282
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 6/257 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I +FDSG+GGL VL+++R L+P +YVAD PYG+ ++ R + +
Sbjct: 2 NPHHPIGVFDSGLGGLTVLREIRRLLPGEDLLYVADSAHAPYGDKSMAFIESRSIAITEF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L++ V+ACNTA LR+ + ++ + PA+K A T+SG++++L+T
Sbjct: 62 LLERGA-KAIVVACNTATGAAAKLLRTQY-NVPLIAMEPAVKPAVERTRSGVVAVLATRR 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL S L+ + I L L RVE + + ++ + G +
Sbjct: 120 TLASHNFSVLLGRLETDAEILLQPCPGLVERVEAG----DLAGEGTRELLRGYLEPLLAR 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYPL+ + ++L+ V LD+ +AR+ R L
Sbjct: 176 GADTLVLGCTHYPLLTPLIQELAGPDVLILDSGIGVARQVRRRLSEAELLAPEERTGRER 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F + P M LM
Sbjct: 236 FWTSAPPARMHALMARL 252
>gi|163753921|ref|ZP_02161044.1| glutamate racemase [Kordia algicida OT-1]
gi|161326135|gb|EDP97461.1| glutamate racemase [Kordia algicida OT-1]
Length = 259
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 7/260 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GG + +++ +P H IY+AD PYG + + +++L
Sbjct: 3 NSPIGIFDSGVGGTSIWREIHKRLPSEHTIYLADSKNAPYGPKGKEKIIDLSVKN-TELL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V+ACNTA T LR + + F+G PAIK AA T+SG I IL+T TL
Sbjct: 62 LKKGCKMIVVACNTATTNAIRHLRKNY-DVPFIGIEPAIKPAALQTKSGTIGILATKGTL 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y + I L +E KI+ E++K ++
Sbjct: 121 SSELFHKTSDLYANGVQIIEQVGEGLVPLIENG----KIESPEMEKLLKLYLTPMLHANI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
D +VL C+HYP ++ + P V +D+ ++AR+ +L + + Q + +
Sbjct: 177 DYLVLGCSHYPYLIPKLQSFLPKHVKIIDSGIAVARQTEAILAKHDLSTQEETRGNCIFY 236
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
+G P+I L F +++
Sbjct: 237 SNGNPEILQHILKHDFSVEA 256
>gi|182624295|ref|ZP_02952080.1| glutamate racemase [Clostridium perfringens D str. JGS1721]
gi|177910513|gb|EDT72886.1| glutamate racemase [Clostridium perfringens D str. JGS1721]
Length = 260
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 6/242 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ ++
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ Y + + L +E ++ +++K + +
Sbjct: 126 NQEKFKNLMDKYGEHREVISLPCPGLVEFIEAG----DLEGEDVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251
IVL CTHYP + V + + VD +D S R + L N +++ + +F
Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241
Query: 252 LS 253
S
Sbjct: 242 NS 243
>gi|15827591|ref|NP_301854.1| glutamate racemase [Mycobacterium leprae TN]
gi|221230068|ref|YP_002503484.1| glutamate racemase [Mycobacterium leprae Br4923]
gi|1171077|sp|P46705|MURI_MYCLE RecName: Full=Glutamate racemase
gi|254766120|sp|B8ZR57|MURI_MYCLB RecName: Full=Glutamate racemase
gi|466915|gb|AAA50890.1| murI [Mycobacterium leprae]
gi|13093142|emb|CAC31553.1| glutamate racemase [Mycobacterium leprae]
gi|219933175|emb|CAR71267.1| glutamate racemase [Mycobacterium leprae Br4923]
Length = 272
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 107/256 (41%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++ +
Sbjct: 7 PVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLSIPEIRAHALAICDDLVGR 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 67 G-VKILVIACNTASAACLRDARERYDVPVVEVILPAVRRAVAATRNGRIGVIGTRATIAS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + I V+ VE + ++ EG + D
Sbjct: 126 HAYQDAFAA-ARDTEITAVACPRFVDFVECGVTSGR----QVLGLAEGYLEPLQRSGVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFL 252
+VL CTHYPL+ + + V + +++ A+ +L + + +
Sbjct: 181 LVLGCTHYPLLAGLIQLAMGENVTLVSSAEETAKEVLRVLTERDLLRRHDAPPVNRVFEA 240
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ ++ + G
Sbjct: 241 TGDPEAFIQLAARFLG 256
>gi|261346833|ref|ZP_05974477.1| glutamate racemase [Providencia rustigianii DSM 4541]
gi|282565012|gb|EFB70547.1| glutamate racemase [Providencia rustigianii DSM 4541]
Length = 287
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL+FDSG+GGL V ++++ ++P H+IY D+ FPYG + + +R+ + + +
Sbjct: 25 RPTILVFDSGVGGLSVYREVKKMLPNAHYIYAFDNEAFPYGEKTEEFIIERVYQIVNAVA 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K+ ++VIACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+
Sbjct: 85 KKHPLTIAVIACNTASTVSLPNLRAHF-TFPIVGVVPAIKPATKLTRNGIVGLLATKGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + C + L+ S L E G + DE+ + I KE
Sbjct: 144 NREYTKELIERFATDCKVILLGSAELVQLAERKLHGETLPLDEVAQAIRPWIKMKEA--P 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTH+PLIV ++ P ++D+ +IARR L+ +D A +
Sbjct: 202 DTVILGCTHFPLIVEELEKVLPNGTRFIDSGAAIARRTVWLINNQAEIANSNEEDFAYCM 261
Query: 253 SGKPDIA-MRRLMQGFGLKS 271
+ +R +++ G KS
Sbjct: 262 LMNDALQELRPVLESEGFKS 281
>gi|49082808|gb|AAT50804.1| PA4662 [synthetic construct]
Length = 266
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L
Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|261868128|ref|YP_003256050.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413460|gb|ACX82831.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 275
Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 5/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL FDSG+GG V +++ L+P+YH++Y D+ FPY + + +R + + I
Sbjct: 6 KPTILFFDSGVGGFSVYHEVKQLLPDYHYLYCFDNAYFPYSEKPEEKIIERTLKICQRID 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y L VIACNTA T++ LR F S+ +G VPAIK AAA T + I +L+T T+
Sbjct: 66 QMYPLDLIVIACNTASTVVLPSLREHF-SIPIVGTVPAIKPAAAQTTTKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R Y S+LI Y + C + + S L E G I +EIK E+
Sbjct: 125 NRKYLSDLIDKYAADCRVEKIGSTKLVELAERKFHGYPIDLNEIKSEVLTWV---TMSDL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PLI +Q P + ++D+ ++A+R LL + ++
Sbjct: 182 DCVVLGCTHFPLIKSEIQQCLPQVIYFIDSGAAVAKRVESLLSDVKVRSKNQTNNQVFCT 241
Query: 253 SG-KPDIAMRRLMQGFGLKS 271
P+ + L+Q G ++
Sbjct: 242 KMISPEDGLPNLIQSLGFET 261
>gi|241889903|ref|ZP_04777201.1| glutamate racemase [Gemella haemolysans ATCC 10379]
gi|241863525|gb|EER67909.1| glutamate racemase [Gemella haemolysans ATCC 10379]
Length = 264
Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N+I +FDSG+GGL V +++ +P Y D PYG+ + K +
Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTKEEIIKNTDRAVKFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+DK L V+ACNTA D L++ + + +G V P ++A T++ + +L T
Sbjct: 61 IDKG-VKLVVLACNTATAAALDYLQNKY-EVPIIGVVQPGARRAIQATENNKVLVLGTKF 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T I + S + + +E + ++ K I
Sbjct: 119 TANSKVYDIEIENINSDIIVFDKACPAFVPFIES---EGNLDKEATKNLISDTLGNTNTL 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D +VL CTHYP++ + + + + AR +L HQ + +H
Sbjct: 176 GVDTVVLGCTHYPILKKDIEEYYGNNIKVISSGREAAREVSTVLGYTKLHQKKFNKKEHR 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
F+S K D +
Sbjct: 236 FFISQKSDNFDSIASKWL 253
>gi|15599857|ref|NP_253351.1| glutamate racemase [Pseudomonas aeruginosa PAO1]
gi|107099671|ref|ZP_01363589.1| hypothetical protein PaerPA_01000689 [Pseudomonas aeruginosa PACS2]
gi|218893759|ref|YP_002442628.1| glutamate racemase [Pseudomonas aeruginosa LESB58]
gi|296391483|ref|ZP_06880958.1| glutamate racemase [Pseudomonas aeruginosa PAb1]
gi|20177990|sp|Q9HVD0|MURI_PSEAE RecName: Full=Glutamate racemase
gi|226722988|sp|B7V0K8|MURI_PSEA8 RecName: Full=Glutamate racemase
gi|9950917|gb|AAG08049.1|AE004880_5 glutamate racemase [Pseudomonas aeruginosa PAO1]
gi|218773987|emb|CAW29802.1| glutamate racemase [Pseudomonas aeruginosa LESB58]
Length = 265
Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L
Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|160947016|ref|ZP_02094219.1| hypothetical protein PEPMIC_00978 [Parvimonas micra ATCC 33270]
gi|158447400|gb|EDP24395.1| hypothetical protein PEPMIC_00978 [Parvimonas micra ATCC 33270]
Length = 267
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 57/264 (21%), Positives = 111/264 (42%), Gaps = 15/264 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN SI +FDSGIGGL V++++ ++P +Y D PYG + +K+
Sbjct: 1 MDNR--------SIGVFDSGIGGLTVVKELTKILPNEKIVYFGDTARVPYGTRSEETIKR 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ L++ +IACNT + + L+ F +P K A+ T++
Sbjct: 53 FSKECI-EFLNQKDIKALIIACNTVSAVALEMLKELFDIYILGVIIPGSKMASYVTKNKK 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I ++ T AT+ I S S+ ++ + + VEE +I + K
Sbjct: 112 IGVIGTNATVLSGAYEKCIKSENSENIVYSKACPLFVPIVEEGLSNTEIALETAK----Y 167
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ- 241
E + D IV+ CTHYP++ + + + + ++ + A + L N
Sbjct: 168 YLNELINQDVDTIVMGCTHYPILENTIKAVVGKDISLVNPAKETANEMKKYLEFNNLLNE 227
Query: 242 -TRVFDDHALFLSGKPDIAMRRLM 264
+ ++ +++ + + L+
Sbjct: 228 ESENIKNNIFYITDDENKFKKNLL 251
>gi|307822892|ref|ZP_07653122.1| glutamate racemase [Methylobacter tundripaludum SV96]
gi|307735667|gb|EFO06514.1| glutamate racemase [Methylobacter tundripaludum SV96]
Length = 270
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 7/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I +FDSG+GGL VL ++R +P +YVAD PYG+ ++ R + +
Sbjct: 2 NAANPIGVFDSGVGGLSVLHEIRRALPGEDLLYVADSAHAPYGDKSQQFIENRSIAITEF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + V+ACNTA LRS F SM + PA+K A+ ++SG+I +L+T
Sbjct: 62 LVSR-NAKAIVVACNTATGAAITTLRSRF-SMPIIAMEPAVKPASENSKSGVIGVLATSR 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL L Y + I + L +VE + D+ + +E + +
Sbjct: 120 TLASDNFVKLFARYGADVEILGQACPGLVEQVEAG----DLSGDKTRILLERYVLPLLER 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D +VL CTHYP + + RQ++ V +D++ ++AR+ R L ++ +
Sbjct: 176 GADTLVLGCTHYPFLAPLIRQIAGPGVTVIDSAAAVARQLRRRLEVVDLLADGARVGGES 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ SG D A+ Q +
Sbjct: 236 CWTSGVVDKALPLFAQLW 253
>gi|318041257|ref|ZP_07973213.1| glutamate racemase [Synechococcus sp. CB0101]
Length = 272
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 6/258 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ +P+ IY+AD PYG ++ + ++
Sbjct: 4 APIGIFDSGLGGLSVWRQVVHHLPDESVIYLADQAHVPYGQRSAQEIQAYCSEIAGQLIA 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
V+ACNTA + + LR FP + LG PA+K A T SG++ +++TPAT +
Sbjct: 64 -MGCKAIVVACNTASAVALEPLRQAFPQLPILGLEPAVKPAVELTNSGVVGVMATPATFQ 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + LA VE + + ++ + D
Sbjct: 123 GELYRATVGRWAGDVQVVEQVCIGLADLVEIGELEGERCDALLRSFLNPML----EAGAD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
IVL CTHYP ++ R+L + LD + ++AR +L + + F
Sbjct: 179 TIVLGCTHYPFVIEAIRRLVGPGLAVLDPAPAVARHLGEVLTAQGLLNGSSAGRELRFFT 238
Query: 253 SGKPDIAMRRLMQGFGLK 270
S +PD R + + G +
Sbjct: 239 SAQPDRFDRSVGRLVGAR 256
>gi|169829488|ref|YP_001699646.1| glutamate racemase [Lysinibacillus sphaericus C3-41]
gi|229486243|sp|B1HW77|MURI_LYSSC RecName: Full=Glutamate racemase
gi|168993976|gb|ACA41516.1| Glutamate racemase [Lysinibacillus sphaericus C3-41]
Length = 265
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 102/258 (39%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG ++ +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIIKRLPNETIYYIGDTARCPYGPRSRQEVRNFTWQ-MAKA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130
L+K + VIACNTA + + L+ P LG + A + A T+ + +L+T
Sbjct: 60 LEKMNIKMLVIACNTATAVALESLQRNMP-FPVLGVINAGARAAVKKTKRHEVVVLATEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + HI ++ VE + K I + +
Sbjct: 119 TIKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKGEFA----TKLIAEGLKPLKNQ 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
+ D ++L CTHYP++ + V+ L +++ A+ A+ +L T H
Sbjct: 175 QFDTVILGCTHYPILQKQIEAVVGEEVNVLSSAEETAKDAQEMLAYNGTLANANTVPAHK 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 235 FFATGSVPIFRSIAENWL 252
>gi|300775208|ref|ZP_07085070.1| glutamate racemase [Chryseobacterium gleum ATCC 35910]
gi|300505948|gb|EFK37084.1| glutamate racemase [Chryseobacterium gleum ATCC 35910]
Length = 276
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V ++++ L+P IY D PYG A+ + + + +
Sbjct: 13 PSQPIGIFDSGVGGLTVAKEIKRLLPNEDLIYFGDTKHLPYGEKSREAIIEYSTKITNFL 72
Query: 72 LDKYQPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L++ VIACNTA +E ++S + + + + + +Y + +++T A
Sbjct: 73 LEQ-NCKAIVIACNTATANALNEVMQSVAGRVPVIDVINPVAEKVSYEIHNNVGVIATKA 131
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ I + + +++ +L +EE I I + + K
Sbjct: 132 TVNSGLYKKSIRKHNKWIKVDELATPLLVPAIEEGFKNHPITHAIIYNYLSNS----KLK 187
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
+ ++L CTHYPL++ +Q V +D+ + +A + ++ + + ++
Sbjct: 188 NIETLILGCTHYPLLIDEIKQYYGNRVRVIDSPNIVANHLKIIMDKYHLLNENNPKPNYH 247
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+LS + + FG
Sbjct: 248 FYLSDLTKNFEKISKKFFG 266
>gi|257126623|ref|YP_003164737.1| glutamate racemase [Leptotrichia buccalis C-1013-b]
gi|257050562|gb|ACV39746.1| glutamate racemase [Leptotrichia buccalis C-1013-b]
Length = 261
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 11/251 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSGIGGL VL+++R ++P Y D PYG + + + +L+K
Sbjct: 2 SIGVFDSGIGGLTVLKEIRKVLPNEKIYYFGDTARVPYGEKTKELIIRYSKEIVEFLLEK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133
V+ACNTA L EL+ F + +G + A + A T++G I ++ T AT+
Sbjct: 62 -DVSAIVVACNTATALALKELKEIFK-IPIIGVIEAGARTAINTTKNGKIGVIGTKATIN 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I + ++ + + + VEE K+ IK ++ ++ D
Sbjct: 120 SEKYTEEIKLFNAEAEVFQKACPLFVPAVEEGILNGKLVNQIIKTYLDDF-----NEKID 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251
++L CTHYPL+ ++ P + +D + A + +L + + ++ +
Sbjct: 175 TLILGCTHYPLLKEAISKIYP-NIKIVDPAKETALDLKEILKENKFLKNDAQKNEEVKYY 233
Query: 252 LSGKPDIAMRR 262
++ +
Sbjct: 234 VTDGKEKFKEI 244
>gi|210623229|ref|ZP_03293668.1| hypothetical protein CLOHIR_01618 [Clostridium hiranonis DSM 13275]
gi|210153766|gb|EEA84772.1| hypothetical protein CLOHIR_01618 [Clostridium hiranonis DSM 13275]
Length = 267
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 8/249 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL++++ ++P +Y D PYG + K + +L
Sbjct: 3 KRGIGVFDSGLGGLTVLKEIKKILPNEDLVYFGDTARVPYGPRSKETIMKYTFQAINFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
K VIACNTA E + + + +G + A + AAA T++G + I+ T T
Sbjct: 63 TK-DVKAIVIACNTATARSLVEAQEKY-DIPIIGVIEAGARTAAASTKNGKVGIIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I + ++ + + VEE ++ K+ E E K
Sbjct: 121 IKSKAYNAEIKKIDKRIKVYGKACSLFVPIVEEGWANTEVARLTAKE----YLKELEEKD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D IVL CTHYPL+ + V ++ + A + +L N T+ +
Sbjct: 177 VDSIVLGCTHYPLLKRTIGEEVGMEVKLVNPARETAIDLKNILIEKNLLNTKEELGECNY 236
Query: 251 FLSGKPDIA 259
F+S +
Sbjct: 237 FVSDINEKF 245
>gi|282916399|ref|ZP_06324161.1| glutamate racemase [Staphylococcus aureus subsp. aureus D139]
gi|282319839|gb|EFB50187.1| glutamate racemase [Staphylococcus aureus subsp. aureus D139]
Length = 266
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGQCPYGPRPGEQVKQYTVEIARKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA + + L+ T S+ +G + P + A T++ + +L T
Sbjct: 61 ME-FDIKMLVIACNTATAVALEYLQKTL-SIPVIGVIEPGARTAIMTTRNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I +H V+ VE+ + I
Sbjct: 119 TIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNS 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 176 ESDTVILGCTHYPLLYKPIYDYFDGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F +G + + L
Sbjct: 236 FFATGDTTHITNIIKEWLNLS 256
>gi|302529722|ref|ZP_07282064.1| glutamate racemase [Streptomyces sp. AA4]
gi|302438617|gb|EFL10433.1| glutamate racemase [Streptomyces sp. AA4]
Length = 266
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 60/262 (22%), Positives = 102/262 (38%), Gaps = 7/262 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
I +FDSG+GGL V + + L+P YV D PYG ++ +
Sbjct: 1 MSSPDAPIGVFDSGVGGLTVARSILELLPAEQLRYVGDTARNPYGPLPIATAREYALAAL 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D+++ L VIACNTA + R + +PA ++AA T +G + ++ T
Sbjct: 61 DDMVESGVKAL-VIACNTASAACLRDARERYDVPVIEVVLPAARRAAVATHTGRVGLIGT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+R + + + V+ VE +I +G
Sbjct: 120 EGTVRSRAYDDAFAA-APDVRLTSVACPRFVDFVERGIT----TGRQILGLAQGYLQPLL 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDD 247
D ++L CTHYPL+ V + + V + ++D A+ +L ++ R
Sbjct: 175 EAEVDTLILGCTHYPLLSGVLQIVMGQDVTLVSSADETAKDLYRVLTELDLLAERDEPPK 234
Query: 248 HALFLSGKPDIAMRRLMQGFGL 269
H +G P+ R + G
Sbjct: 235 HEFLATGSPEPFARLAQRFMGF 256
>gi|110800511|ref|YP_697257.1| glutamate racemase [Clostridium perfringens ATCC 13124]
gi|168209809|ref|ZP_02635434.1| glutamate racemase [Clostridium perfringens B str. ATCC 3626]
gi|123049548|sp|Q0TM83|MURI_CLOP1 RecName: Full=Glutamate racemase
gi|110675158|gb|ABG84145.1| glutamate racemase [Clostridium perfringens ATCC 13124]
gi|170712130|gb|EDT24312.1| glutamate racemase [Clostridium perfringens B str. ATCC 3626]
Length = 260
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 6/242 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ ++
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ Y + + L +E ++ +++K + +
Sbjct: 126 NQEKFKNLMDKYGEHREVIPLPCPGLVEFIEAG----DLEGEDVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251
IVL CTHYP + V + + VD +D S R + L N +++ + +F
Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241
Query: 252 LS 253
S
Sbjct: 242 NS 243
>gi|170077204|ref|YP_001733842.1| glutamate racemase [Synechococcus sp. PCC 7002]
gi|229486281|sp|B1XPV8|MURI_SYNP2 RecName: Full=Glutamate racemase
gi|169884873|gb|ACA98586.1| glutamate racemase [Synechococcus sp. PCC 7002]
Length = 279
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 9/262 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ Q+ I IFDSG+GG+ VL+ + +P+ IY AD PYG+ L + + +
Sbjct: 1 MGNQQQHPIGIFDSGLGGITVLRALYRQLPQESIIYFADTARLPYGDRSPEELIQYVREI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ + + + V+ACNT+ + D +RS F + LG + P + A +Q I ++
Sbjct: 61 LTWM-EAQGVKMVVMACNTSSAIALDVIRSEFKT-PVLGLILPGARGAV--SQGKRIGVI 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT+ N I + + + +E +I + K+ ++
Sbjct: 117 ATQATVNSGAYENAILEANPEAAVWQMPCPEFVPLIEAN----RINDPHTKRIVQKRLQP 172
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D +V CTHY + V + + P V +D ++ + L + +
Sbjct: 173 LLEQGIDTLVYGCTHYRHLSGVIQSILPSHVICVDPAEYVVSATEQELELMGWKNPQSPL 232
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+SG PD + G
Sbjct: 233 PTRFAVSGCPDQFAQSAKGWLG 254
>gi|240169479|ref|ZP_04748138.1| glutamate racemase [Mycobacterium kansasii ATCC 12478]
Length = 271
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ IFDSG+GGL V + + +P+ IYV D PYG ++ + + D++D
Sbjct: 6 APVGIFDSGVGGLTVARAIIDQLPDEDIIYVGDTGNGPYGPLTIPEIRAHALAIGDDLVD 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ VL VIACN+A + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKVL-VIACNSASAACLRDARERYDVPVVEVILPAVRRAVAATRNGRIGVIGTRATIT 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I V+ VE + ++ EG + D
Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAGVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251
+VL CTHYPL+ + + V + +++ A+ +L + + +
Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGDHVTLVSSAEETAKEVLRVLTQSDLLRPHDAPPATRVFE 239
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 240 ATGDPEAFTRLAARFLG 256
>gi|311741210|ref|ZP_07715034.1| glutamate racemase [Corynebacterium pseudogenitalium ATCC 33035]
gi|311303380|gb|EFQ79459.1| glutamate racemase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 259
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P IY D PYG ++ + +++
Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPHESVIYTGDTAHSPYGPRPISEVRAFSQGVADRLVE 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNTA + R + PA+++A + T++G I ++ T T++
Sbjct: 66 RG-CKMLVIACNTATAAFLHDARERYDIPIVEVIRPAVRRAMSTTRNGKIGVIGTEGTIK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+L + + + VE + +I EG + + D
Sbjct: 125 SGAYQDLF-ALNPKVQAFATACPDFVPFVERGITAGR----QILGVAEGYLAPLQAQGVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
+VL CTHYPL+ + + V + +S+ + +L + H
Sbjct: 180 TLVLGCTHYPLLTGIIQLAMGDNVSLVTSSEETTKDVMRILTETDMLAPAENQPVHTFES 239
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 240 TGDPEAFARLAARFLG 255
>gi|118470579|ref|YP_889158.1| glutamate racemase [Mycobacterium smegmatis str. MC2 155]
gi|166231042|sp|A0R1X0|MURI_MYCS2 RecName: Full=Glutamate racemase
gi|118171866|gb|ABK72762.1| glutamate racemase [Mycobacterium smegmatis str. MC2 155]
Length = 277
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 12/261 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++
Sbjct: 6 APIGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHSLAIGDDLVS 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKAL-VIACNTASSACLRDARERYSPVPVVEVILPAVRRAVAATRNGRIGVIGTQATI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V+ VE + ++ EG +
Sbjct: 125 ASGAYQDAFAA-ARDTEVFTVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQLAEV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----- 247
D +VL CTHYP++ + + V + +++ A+ +L ++ + D
Sbjct: 180 DTLVLGCTHYPMLSGLIQLAMGDNVTLVSSAEETAKDLLRVLTELDLLRPHPDDPSVTAV 239
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 240 RRFEATGDPEAFTALAARFLG 260
>gi|332704699|ref|ZP_08424787.1| Glutamate racemase [Desulfovibrio africanus str. Walvis Bay]
gi|332554848|gb|EGJ51892.1| Glutamate racemase [Desulfovibrio africanus str. Walvis Bay]
Length = 282
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ +R L+P F Y+ D PYG ++ + + ++ +
Sbjct: 13 PIGVFDSGVGGLTVLRALRELLPGEDFRYLGDTARLPYGTKSRESVVRYALQSSRHLVAQ 72
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
L V+ACNTA +L +P + +G V P + A +G I++++T +T++
Sbjct: 73 G-VKLLVVACNTATAAALPDLAEAYPGIPVVGVVRPGARAGCALNTNGRIAVMATESTVQ 131
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I I + + + EE + E +K+ ++ F E +
Sbjct: 132 GGAYQAAIRELCPNMRIEAAACSLFVALAEEGWTEGPLVEGIVKRYLDPLFARFEDQPPT 191
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFDDHAL 250
+VL CTH+P++ +++ V +D++ + A+ R LL R R
Sbjct: 192 SLVLGCTHFPMLAGAIAKVAGEGVTVIDSAVTTAQEVRELLVRHGLGHPEPDRPDAKTYF 251
Query: 251 FLSGKPDIAMR 261
F + + R
Sbjct: 252 FATDGRERFAR 262
>gi|255324315|ref|ZP_05365436.1| glutamate racemase [Corynebacterium tuberculostearicum SK141]
gi|255298645|gb|EET77941.1| glutamate racemase [Corynebacterium tuberculostearicum SK141]
Length = 259
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P IY D PYG ++ + +++
Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPHESVIYTGDTAHSPYGPRPISEVRAFSQDVADRLVE 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNTA + R + PA+++A + T++G I ++ T T++
Sbjct: 66 RG-CKMLVIACNTATAAFLHDARERYDIPIVEVIRPAVRRAMSTTRNGKIGVIGTEGTIK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+L + + + VE + +I EG + + D
Sbjct: 125 SGAYQDLF-ALNPKVQAFATACPDFVPFVERGITAGR----QILGVAEGYLAPLQEQGVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
+VL CTHYPL+ + + V + +S+ + +L + H
Sbjct: 180 TLVLGCTHYPLLTGIIQLAMGDNVSLVTSSEETTKDVMRILTETDMLAPAENQPVHTFES 239
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 240 TGDPEAFARLATRFLG 255
>gi|154707217|ref|YP_001425115.1| glutamate racemase [Coxiella burnetii Dugway 5J108-111]
gi|154356503|gb|ABS77965.1| glutamate racemase [Coxiella burnetii Dugway 5J108-111]
Length = 280
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 4/256 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S IL
Sbjct: 5 RPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS-ILI 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T+
Sbjct: 64 AQNIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + + Q I + + + EE +I KK +E +
Sbjct: 124 QSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPIINGY--HQC 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTH+P+++ + ++ ++++ + A + +L + N + +
Sbjct: 182 DSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTLSFLV 241
Query: 253 SGKPDIAMRRLMQGFG 268
+ P+ R FG
Sbjct: 242 TDSPERFTRIGEIFFG 257
>gi|332686497|ref|YP_004456271.1| glutamate racemase [Melissococcus plutonius ATCC 35311]
gi|332370506|dbj|BAK21462.1| glutamate racemase [Melissococcus plutonius ATCC 35311]
Length = 273
Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 10/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I + DSG+GGL V++++ +P +FIY+ D PYG+ + + + + +L
Sbjct: 4 QYAIGLIDSGVGGLTVVKELCRQLPNENFIYLGDTAHCPYGSKPTEQVIQYTWQMTNFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K L VIACNTA + +E+++T + +G + P + A A T+S I ++ T T
Sbjct: 64 RKK-IKLLVIACNTATAAVLEEIKNTL-DIPVIGVIAPGARAAIAATKSQRIGVIGTEGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I V + + ++ VE ++ + K + K+
Sbjct: 122 IKSQAYEKNIKLLVEKSFVSCLACPSFVPLVEMGNYHTIKAKEIVTKT----LAPLKLKQ 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDH 248
D +VL CTHYPL+ + V +D S + + LL N ++QT
Sbjct: 178 LDTLVLGCTHYPLLRSFIQTAIGSQVTLIDPSIETVKEIQDLLAHSNKLTSNQTNNNPSR 237
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+ +G + +
Sbjct: 238 KFYTTGSIKTFEKIAIDWL 256
>gi|330941681|gb|EGH44456.1| glutamate racemase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 270
Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+ +Y+AD PYG + +R + +
Sbjct: 10 DAPVGIFDSGVGGLSVLNEIRQLLLSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 70 EQGAKAL-VVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +I++ ++ R
Sbjct: 129 QSARFAALLDRFANDVRVVTQPCPGLVELIETG----DLVSPQIRQLLQHYVEPLLAARC 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D +
Sbjct: 185 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVARDTVYWS 244
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 245 SDIPDNFRKIL 255
>gi|266620112|ref|ZP_06113047.1| glutamate racemase [Clostridium hathewayi DSM 13479]
gi|288868341|gb|EFD00640.1| glutamate racemase [Clostridium hathewayi DSM 13479]
Length = 272
Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 10/252 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V +++ MPE +Y D PYGN + + + + +L
Sbjct: 5 NSPIGVFDSGVGGLTVAREIMRQMPEERIVYFGDTARVPYGNKSGNTVIRFTRQIIRFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNTA + + + +G + A + A T++G I I+ T T
Sbjct: 65 TQ-DVKAIVIACNTATAYALEAVEGEL-DIPIIGVIHAGARTATQATKNGKIGIIGTEGT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + ++ + +L VEE + ++ E +GK
Sbjct: 123 IRSGVYTKVMMEMRPDIEVTGKPCPLLVPLVEEGLLHDSVTDE----IASRYLSELKGKY 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-- 249
D +VL CTHYPL+ +L V ++ + A + +L + + +
Sbjct: 179 IDTLVLGCTHYPLLRSTVGRLMGPEVTLVNPAYETALELKSVLTEADLLCSGPAEGQEQY 238
Query: 250 -LFLSGKPDIAM 260
++S +
Sbjct: 239 LFYVSDLAEKFT 250
>gi|325286852|ref|YP_004262642.1| Glutamate racemase [Cellulophaga lytica DSM 7489]
gi|324322306|gb|ADY29771.1| Glutamate racemase [Cellulophaga lytica DSM 7489]
Length = 263
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 70/255 (27%), Positives = 124/255 (48%), Gaps = 7/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I +FDSG+GG + +++ L+P + IY+AD PYG + RL +++L
Sbjct: 3 NNPIGVFDSGVGGTSIWKEIHKLLPLENTIYLADSANAPYGKKSPEDIL-RLSIKNTELL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + V+ACNTA T LR T+ +++F+G PAIK A + S + +L+T TL
Sbjct: 62 LQHNCKIIVVACNTATTNAITYLRETYTNVSFIGIEPAIKPAVLQSNSKTVGVLATKGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + ++ I L +E E K ++ +
Sbjct: 122 SSSLFHSTVKNHAEGIKIIEKEGEGLVPLIESGKA----TSVEAKDLLKTFLEPMLEQNI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
D +VL CTHYP ++ V ++L P V+ +D+ +++AR+ + +L R N V H +
Sbjct: 178 DYLVLGCTHYPYLIPVLKELLPAHVNIIDSGEAVARQTKAILERENLLNRGNVASSHKFY 237
Query: 252 LSGKPDIAMRRLMQG 266
+ I +R ++G
Sbjct: 238 TNADVSI-LRSFLKG 251
>gi|300714768|ref|YP_003739571.1| glutamate racemase [Erwinia billingiae Eb661]
gi|299060604|emb|CAX57711.1| Glutamate racemase [Erwinia billingiae Eb661]
Length = 260
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 79/255 (30%), Positives = 138/255 (54%), Gaps = 4/255 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V +++R LMP+ H++Y D+V FPYG + + R++ + + +Y
Sbjct: 2 LVFDSGVGGLSVYEELRQLMPDLHYLYAFDNVAFPYGEKSEEFIVHRVVDIVEAVTRRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L VIACN+A T+ LR+ F +G VPAIK AA T++G++ +L+T T++R Y
Sbjct: 62 LALVVIACNSASTVTLPALRARF-DFPVVGVVPAIKPAARLTRNGIVGLLATRGTVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T L+ + S+C ++ S L E G + +E+++ ++ KE D +V
Sbjct: 121 THELVARFASECKTEMLGSAELVELAEAKLQGKPVPLEEVRRILQPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS-GK 255
L CTH+PL+ +Q+ P +D+ +IARR LL + + A + +
Sbjct: 179 LGCTHFPLLNEELQQVLPEGTRLVDSGAAIARRTAWLLENESPAAFSADSNIAFCMDITE 238
Query: 256 PDIAMRRLMQGFGLK 270
+ + +++ +G +
Sbjct: 239 QAVQLMPVLKRYGFE 253
>gi|227354692|ref|ZP_03839111.1| glutamate racemase [Proteus mirabilis ATCC 29906]
gi|227165202|gb|EEI50027.1| glutamate racemase [Proteus mirabilis ATCC 29906]
Length = 288
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 83/265 (31%), Positives = 142/265 (53%), Gaps = 3/265 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ ++L+FDSG+GGL + +++R +P+ H+IYV D+ FPYG + +R++ +
Sbjct: 20 AQSTANPTVLVFDSGVGGLSIYREIREKLPDAHYIYVFDNEAFPYGEKPQEFIIERVVRI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
S + +++ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+
Sbjct: 80 VSAVAQQHELAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLA 139
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++R YT LI + ++C +HL+ S L E+ G K+ DE+++ + K
Sbjct: 140 TRATVKRPYTHELIERFATECKVHLLGSAELVELAEKKLHGEKVSCDELRRILAPWLKMK 199
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D +VL CTH+PL+ + P +D+ +IARR L+ + +
Sbjct: 200 EP--PDTVVLGCTHFPLLEEELLSVLPDGTRIIDSGGAIARRTAWLVVNQDKIRGSKEIS 257
Query: 248 HALFLSGKP-DIAMRRLMQGFGLKS 271
A L ++ ++ FG K+
Sbjct: 258 FAYCLKEDEYSELLKPVLADFGFKT 282
>gi|319953665|ref|YP_004164932.1| glutamate racemase [Cellulophaga algicola DSM 14237]
gi|319422325|gb|ADV49434.1| Glutamate racemase [Cellulophaga algicola DSM 14237]
Length = 259
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 6/245 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GG + +++ L+P IY+AD PYG + + +L
Sbjct: 4 QPIGIFDSGVGGTSIWKEIHKLLPNEDTIYLADSKNAPYGEKSADEILNLSIKNTEFLL- 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ VIACNTA T LR T+ + F+G PAIK AA ++S I +L+T TL
Sbjct: 63 NLGCKIIVIACNTATTNAIAYLRKTY-DIPFIGIEPAIKPAALNSKSKTIGVLATKGTLT 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +Y + L +E K+ E++ + + D
Sbjct: 122 SALFNTTSKNYSEGITVIDQDGEGLVPLIESG----KVNGVEVRNLLLKYLNPMIHQGID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP ++ V +++ V +D+ +++A+ + +L + + H + +
Sbjct: 178 YLVLGCTHYPYLIPVIQEIVSDKVTIIDSGEAVAKHTKSILEKFKLSASDQLSKHQFYSN 237
Query: 254 GKPDI 258
D
Sbjct: 238 KNADE 242
>gi|212213193|ref|YP_002304129.1| glutamate racemase [Coxiella burnetii CbuG_Q212]
gi|212011603|gb|ACJ18984.1| glutamate racemase [Coxiella burnetii CbuG_Q212]
Length = 280
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 4/256 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S IL
Sbjct: 5 RPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS-ILI 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T+
Sbjct: 64 TQNIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + + Q I + + + EE +I KK +E +
Sbjct: 124 QSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPIINGY--HQC 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTH+P+++ + ++ ++++ + A + +L + N + +
Sbjct: 182 DSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTLSFLV 241
Query: 253 SGKPDIAMRRLMQGFG 268
+ P+ R FG
Sbjct: 242 TDSPERFTRIGEIFFG 257
>gi|268593423|ref|ZP_06127644.1| glutamate racemase [Providencia rettgeri DSM 1131]
gi|291311122|gb|EFE51575.1| glutamate racemase [Providencia rettgeri DSM 1131]
Length = 287
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 135/260 (51%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL+FDSG+GGL V ++++ ++P H+IY D+ FPYG + + R+ + + I
Sbjct: 25 RPTILVFDSGVGGLSVYREVKKMIPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQIVNAIA 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K+ +++IACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+
Sbjct: 85 AKHPLTIAIIACNTASTVSLPNLRAHF-TFPVVGVVPAIKPATKLTRNGVVGLLATKGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + C + + S L E G + DE+ + + E
Sbjct: 144 NREYTKELIERFATDCKVISLGSAELVQLAERKLHGETLPLDEVAQTVRPWIRMPEP--P 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTH+PL++ ++ P ++D+ +IARR L+ ++ A L
Sbjct: 202 DTVILGCTHFPLLIEELEKVLPNGTRFIDSGSAIARRTVWLINNQEEIANSEEENFAYCL 261
Query: 253 S-GKPDIAMRRLMQGFGLKS 271
++ +++ G K+
Sbjct: 262 LMDDNAKGLQPVLEAEGFKT 281
>gi|258515013|ref|YP_003191235.1| glutamate racemase [Desulfotomaculum acetoxidans DSM 771]
gi|257778718|gb|ACV62612.1| glutamate racemase [Desulfotomaculum acetoxidans DSM 771]
Length = 266
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 6/254 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSG+GGL +++++R L+PE IY AD PYG ++ R + +L
Sbjct: 5 AAIGLFDSGVGGLSIMKEVRKLLPEEDLIYFADSAYCPYGIKTPEVIRARCFSICDFLL- 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K L V+A NT D +R + + +G PAIK AA +++G I IL+T T+
Sbjct: 64 KEGVKLIVVASNTTSVAGLDLIRKHYR-IPIVGVEPAIKPAAELSRNGKIGILATGVTIN 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
S+L+ + S + L VEE K+ + + + +D
Sbjct: 123 GERFSSLVERFGSNIEVFTQPCPGLVELVEEG----KLDCPQTEALLHRYMDPMLVHGSD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTHYP + + +++ + +D +++AR+ ++ +N T + S
Sbjct: 179 TIVLGCTHYPFLRSLVEKIAGPQITVIDTGEAVARQVSRIVNTLNQISTGKQGKEIFYTS 238
Query: 254 GKPDIAMRRLMQGF 267
G + + +
Sbjct: 239 GSTAKVTPIIQELW 252
>gi|327395709|dbj|BAK13131.1| glutamate racemase MurI [Pantoea ananatis AJ13355]
Length = 241
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 132/227 (58%), Gaps = 3/227 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ +
Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKTETFIVERVVAIVD 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I ++ L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T
Sbjct: 78 AITRRHPISLVIIACNTASTVTLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+RR+YT L+ + C I ++ S L E G ++ DEI++ ++ +
Sbjct: 137 ATVRRSYTHELVSQFAKTCKIEMLGSAELVELAEAKLHGEEVSIDEIRRIVQPWL--RMA 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D +VL CTH+PL+ +Q+ P +D+ +IARR LL +
Sbjct: 195 EPPDTVVLGCTHFPLLRDELQQILPEGTRLIDSGAAIARRTAWLLGK 241
>gi|302384966|ref|YP_003820788.1| glutamate racemase [Clostridium saccharolyticum WM1]
gi|302195594|gb|ADL03165.1| glutamate racemase [Clostridium saccharolyticum WM1]
Length = 272
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 104/256 (40%), Gaps = 10/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V +++ MP+ +Y D PYG+ + + + +L
Sbjct: 5 NSPIGVFDSGVGGLTVAREIMRQMPDERIVYFGDTARVPYGSKSCSTVIRFTRQIIRFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNTA + + + +G + A + A T++G I I+ T T
Sbjct: 65 TQ-DVKAIVIACNTATACALEAVEKEV-EIPIVGVIHAGARTAVDSTKNGKIGIIGTEGT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + ++ + +L VEE + ++ E +GK
Sbjct: 123 IRSGVYTRVMKEMREDIDVTGKPCPLLVPLVEEGLLHDSVTDE----IASRYLSELKGKY 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDH 248
D +VL CTHYPL+ +L V ++ + A + +L + ++ + +
Sbjct: 179 IDTLVLGCTHYPLLRSTVGRLMGPEVTLVNPAYETALELKQILEGKDLLCGQESNDVEKY 238
Query: 249 ALFLSGKPDIAMRRLM 264
++S +
Sbjct: 239 HFYVSDLAEKFTSFAA 254
>gi|259906847|ref|YP_002647203.1| glutamate racemase [Erwinia pyrifoliae Ep1/96]
gi|224962469|emb|CAX53924.1| Glutamate racemase [Erwinia pyrifoliae Ep1/96]
gi|283476639|emb|CAY72467.1| murI [Erwinia pyrifoliae DSM 12163]
Length = 283
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 4/264 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ ++LIFDSG+GGL V ++ L+P+ H++Y D+V FPYG + + +R+M +
Sbjct: 16 APSVPRPTVLIFDSGVGGLSVYNEICALLPDLHYLYAFDNVAFPYGEKSEEFIVERVMAI 75
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+
Sbjct: 76 VTAVTRLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLA 134
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++R YT LI + +C ++ S L E G + +E+++ ++
Sbjct: 135 TRGTVKRPYTHELIARFAGECKTEMLGSGELVEIAEAKLHGQPVALEEVRRILQPWLRMP 194
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+
Sbjct: 195 EP--PDTVVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPEALSADDN 252
Query: 248 HALFLS-GKPDIAMRRLMQGFGLK 270
AL L + + + ++Q +G K
Sbjct: 253 MALCLDITEQAVQLIPVLQRYGFK 276
>gi|16330377|ref|NP_441105.1| glutamate racemase [Synechocystis sp. PCC 6803]
gi|2492985|sp|P73737|MURI_SYNY3 RecName: Full=Glutamate racemase
gi|1652867|dbj|BAA17785.1| glutamate racemase [Synechocystis sp. PCC 6803]
Length = 279
Score = 291 bits (747), Expect = 5e-77, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 9/263 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ ++ I +FDSG+GGL VL+++ +P+ +Y D PYG + + + +
Sbjct: 1 MREPQRSRIGVFDSGVGGLTVLRELYRQLPKESILYFGDTARLPYGKRSPQVILQYVREI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ + + + ++ACNT+ L + ++ F +M LG + P + A Q I ++
Sbjct: 61 LTWM-AAEEVKMVIMACNTSSALALETVQQEF-NMPILGVILPGARAAVR--QGRRIGVI 116
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
STPAT + IH + ++ +E+ ++ + + +G
Sbjct: 117 STPATAASNAYRHAIHEITPDALVWQMACPEFVPLIEQN----RLHDPYTLEVAKGYLQP 172
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D +V CTHY + VF+Q+ P + +D + + + AR L + + +
Sbjct: 173 LLDADIDTLVFGCTHYRHLTPVFQQILPSHIRLVDPASHVVKAARQELEVMGLRNSEMSI 232
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
+SG P Q G
Sbjct: 233 ATRFTVSGCPQQFAELSHQWLGF 255
>gi|254244446|ref|ZP_04937768.1| glutamate racemase [Pseudomonas aeruginosa 2192]
gi|126197824|gb|EAZ61887.1| glutamate racemase [Pseudomonas aeruginosa 2192]
Length = 265
Score = 291 bits (747), Expect = 5e-77, Method: Composition-based stats.
Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GG VL+++R +P +YVAD+ PYG +++R + +L
Sbjct: 5 SAAVGVFDSGVGGFSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|153208641|ref|ZP_01946893.1| glutamate racemase [Coxiella burnetii 'MSU Goat Q177']
gi|165919769|ref|ZP_02219512.1| glutamate racemase [Coxiella burnetii RSA 334]
gi|212218133|ref|YP_002304920.1| glutamate racemase [Coxiella burnetii CbuK_Q154]
gi|120575827|gb|EAX32451.1| glutamate racemase [Coxiella burnetii 'MSU Goat Q177']
gi|165916852|gb|EDR35456.1| glutamate racemase [Coxiella burnetii RSA 334]
gi|212012395|gb|ACJ19775.1| glutamate racemase [Coxiella burnetii CbuK_Q154]
Length = 280
Score = 291 bits (747), Expect = 5e-77, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 4/256 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S IL
Sbjct: 5 RPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS-ILI 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T T+
Sbjct: 64 AQNIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLATETTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + + Q I + + + EE +I KK +E +
Sbjct: 124 QSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPII--NVYHQC 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTH+P+++ + ++ ++++ + A + +L + N + +
Sbjct: 182 DSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTLSFLV 241
Query: 253 SGKPDIAMRRLMQGFG 268
+ P+ R FG
Sbjct: 242 TDSPERFTRIGEIFFG 257
>gi|154250720|ref|YP_001411544.1| glutamate racemase [Parvibaculum lavamentivorans DS-1]
gi|154154670|gb|ABS61887.1| glutamate racemase [Parvibaculum lavamentivorans DS-1]
Length = 276
Score = 291 bits (747), Expect = 6e-77, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 5/253 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + +I +FDSGIGG+ VL+ +R +P +Y+ D PYG +
Sbjct: 4 KSERAIGVFDSGIGGITVLKALRAALPHEDLVYLGDTARLPYGTKSPETVTAYATQATKH 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+++ + + VIACNTA + L + +G + P K A T+SG I ++ T
Sbjct: 64 LME-HGVKMVVIACNTASAVAIGPLTEALKPLPVIGVIEPGAKAGVAATKSGRIGVIGTE 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R IH+ + + + + EE ++ E K+ + F +
Sbjct: 123 ATVRGGAYMRAIHALDPKAQVTQAPCGLFVTLAEEGWTSGEVAEAAAKRYLAPLFKGRNA 182
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D +VL CTH+P++ + +++ V +D++ + A+ L R
Sbjct: 183 --PDTLVLGCTHFPVLARIIKKVVGKNVKLVDSAATTAKAVEAALAEQGLASRRRGKGKT 240
Query: 249 ALFLSGKPDIAMR 261
+ + R
Sbjct: 241 RFLATDSAERFAR 253
>gi|168205832|ref|ZP_02631837.1| glutamate racemase [Clostridium perfringens E str. JGS1987]
gi|169343233|ref|ZP_02864244.1| glutamate racemase [Clostridium perfringens C str. JGS1495]
gi|169298531|gb|EDS80612.1| glutamate racemase [Clostridium perfringens C str. JGS1495]
gi|170662679|gb|EDT15362.1| glutamate racemase [Clostridium perfringens E str. JGS1987]
Length = 260
Score = 291 bits (747), Expect = 6e-77, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 6/242 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ ++
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ Y + + L +E ++ +++K + +
Sbjct: 126 TQEKFKNLMDKYGEHREVIPLPCPGLVEFIEAG----DLEGEDVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251
IVL CTHYP + V + + VD +D S R + L N +++ + +F
Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241
Query: 252 LS 253
S
Sbjct: 242 NS 243
>gi|313107324|ref|ZP_07793519.1| glutamate racemase [Pseudomonas aeruginosa 39016]
gi|310880021|gb|EFQ38615.1| glutamate racemase [Pseudomonas aeruginosa 39016]
Length = 265
Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L
Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGGVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|197287060|ref|YP_002152932.1| glutamate racemase [Proteus mirabilis HI4320]
gi|229486247|sp|B4F1H6|MURI_PROMH RecName: Full=Glutamate racemase
gi|194684547|emb|CAR46364.1| glutamate racemase [Proteus mirabilis HI4320]
Length = 288
Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 141/264 (53%), Gaps = 3/264 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ ++L+FDSG+GGL + +++R +P+ H+IYV D+ FPYG + +R++ +
Sbjct: 20 AQSTANPTVLVFDSGVGGLSIYREIREKLPDAHYIYVFDNEAFPYGEKPQEFIIERVVRI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
S + +++ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+
Sbjct: 80 VSAVAQQHELAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLA 139
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++R YT LI + ++C +HL+ S L E+ G K+ DE+++ + K
Sbjct: 140 TRATVKRPYTHELIERFATECKVHLLGSAELVELAEKKLHGEKVSCDELRRILAPWLKMK 199
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D +VL CTH+PL+ + P +D+ +IARR L+ + +
Sbjct: 200 EP--PDTVVLGCTHFPLLEEELLSVLPDGTRIIDSGGAIARRTAWLVVNQDKIRGSKEIS 257
Query: 248 HALFLSGKP-DIAMRRLMQGFGLK 270
A L ++ ++ FG K
Sbjct: 258 FAYCLKEDEYSELLKPVLADFGFK 281
>gi|331701298|ref|YP_004398257.1| glutamate racemase [Lactobacillus buchneri NRRL B-30929]
gi|329128641|gb|AEB73194.1| Glutamate racemase [Lactobacillus buchneri NRRL B-30929]
Length = 264
Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 112/268 (41%), Gaps = 16/268 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+++ ++P +I++ D PYG ++K
Sbjct: 1 MDNRP--------IGVMDSGVGGLTVLKEITKILPNESYIFIGDQANLPYGQKSSETVRK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ ++++ + VIACNTA + L+ P + +G + P + A ++SG
Sbjct: 53 LTKRIADYLVEQ-NIKMFVIACNTATAAAYEYLKKILP-IPVIGVIEPGAQMAVEASKSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T T+R LI + + + VEE G E + +
Sbjct: 111 EIGVIATNGTVRSGDYQRLIKQANRSAVVSSLGCPEFVTMVEEGLAGTV----EAQVAVN 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
K D +V+ CTH+P++ + + + V +D + A++ + L +
Sbjct: 167 NRLAWFMDKPIDTLVMGCTHFPILKNEIQNVMGNAVTLIDPGVATAQQVKAKLAAHDGFA 226
Query: 242 TRVFDD-HALFLSGKPDIAMRRLMQGFG 268
+ +G P + + G
Sbjct: 227 PAQKQRVRRFYTTGNPADFAKVADKLLG 254
>gi|114045687|ref|YP_736237.1| glutamate racemase [Shewanella sp. MR-7]
gi|122945064|sp|Q0I0C5|MURI_SHESR RecName: Full=Glutamate racemase
gi|113887129|gb|ABI41180.1| glutamate racemase [Shewanella sp. MR-7]
Length = 272
Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 133/266 (50%), Gaps = 11/266 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P +++ Y+ D+ PYG E+ L + L +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHNYCYLFDNARLPYGELEEQELISGCVALIDQV 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L S L E+ ++ +
Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQKIATGQLD----MARLAQVLSPIVEAD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ------TRVF 245
DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q R
Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGKGVTLLDSGEAIAKRVKTLLAETKSEQQVQEDANRDS 235
Query: 246 DDHALFLSGKPDIAMRRLMQGFGLKS 271
A + + + ++ G +
Sbjct: 236 VMQAFYTKAEISEGLASMLVDCGFST 261
>gi|282895562|ref|ZP_06303696.1| Glutamate racemase [Raphidiopsis brookii D9]
gi|281199402|gb|EFA74266.1| Glutamate racemase [Raphidiopsis brookii D9]
Length = 292
Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats.
Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 9/262 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E+ ++ I +FDSG+GGL VL+++ +P IY D PYG + + +
Sbjct: 21 EEIPKSPIGVFDSGVGGLTVLRQVYQQLPNESVIYFGDTAHLPYGIRSQKEILGYVREIL 80
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ + ++ + ++ACNT+ L + +R + LG + PA K A I +++
Sbjct: 81 NWM-EQQGVKMVIMACNTSSALTLETVRLEYK-FPILGMISPATKFAVNV--GKRIGVIA 136
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT + I + VS +E+ ++ + +
Sbjct: 137 TPATAKSNAYRQAIMELKPNVQVWQVSCPEFVPLIEQN----RLHDPYTLAVAKSYLEPL 192
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D ++ CTHYPL+ + + L P + +D + + R + L +N +
Sbjct: 193 LAQEIDTLIYGCTHYPLLEPIIKTLIPNHIHLVDPAVHVVRVCQRELEILNIKNHLLPMP 252
Query: 248 HALFLSGKPDIAMRRLMQGFGL 269
+SG P + G
Sbjct: 253 TRFVVSGSPQHFSQSGTPWLGY 274
>gi|326330807|ref|ZP_08197108.1| glutamate racemase [Nocardioidaceae bacterium Broad-1]
gi|325951337|gb|EGD43376.1| glutamate racemase [Nocardioidaceae bacterium Broad-1]
Length = 285
Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 101/262 (38%), Gaps = 7/262 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ I IFDSG GGL V + + + +YV D PYG +++ +
Sbjct: 16 AQPDRDAPIGIFDSGFGGLTVARSVIDQLAHESILYVGDTARAPYGPRPIAEVREYALEC 75
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
++++ L VIACN+A + + R + + + + PA ++A A +++G I ++
Sbjct: 76 LDHLVEQGVKAL-VIACNSASAAMLRDARERYKPLPVVEVILPATRRAVAASRTGRIGVI 134
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT + + +H + VE G +E+
Sbjct: 135 CTHATAESMAYDDAFAA-APHVSLHTRACPQFVPFVEAGVTGG----EELLAAAHEYLDP 189
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D ++L CTHYPL+ V + V + +++ A+ +L + +
Sbjct: 190 LTSAGVDTLILGCTHYPLLTGVISYVMGDNVTLVSSAEESAKDVYRVLAENDLMREGGEP 249
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+ +G P + G
Sbjct: 250 TYTFLTTGNPAEFKAIGARFLG 271
>gi|168217333|ref|ZP_02642958.1| glutamate racemase [Clostridium perfringens NCTC 8239]
gi|182380603|gb|EDT78082.1| glutamate racemase [Clostridium perfringens NCTC 8239]
Length = 260
Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 6/242 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ ++
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ Y + + L +E ++ +++K + +
Sbjct: 126 TQEKFKKLMDKYGEHREVIPLPCPGLVEFIEAG----DLEGEDVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251
IVL CTHYP + V + + VD +D S R + L N +++ + +F
Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241
Query: 252 LS 253
S
Sbjct: 242 NS 243
>gi|289706341|ref|ZP_06502699.1| glutamate racemase [Micrococcus luteus SK58]
gi|289556836|gb|EFD50169.1| glutamate racemase [Micrococcus luteus SK58]
Length = 310
Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats.
Identities = 57/276 (20%), Positives = 103/276 (37%), Gaps = 16/276 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ I +FDSG+GGL V + + +P +YV D PYG ++
Sbjct: 1 MTGRRTAVDAAAPIGVFDSGVGGLTVARAIMDQLPHESILYVGDTEHSPYGPRPIAEVRA 60
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYT 118
+ + +++ + L VIACN+A + + R + + + + PA+++A A T
Sbjct: 61 LALAIMDELVARGVKAL-VIACNSASAAVLRDARERYTGGHGIPVIEVIQPAVRRAVAAT 119
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++G I ++ T AT+ + + I V+ VE E+ +
Sbjct: 120 RTGRIGVIGTEATVGSRAYEDSFSA-APHLEITSVACPRFVEFVEAGIT----TGPELLE 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTHYPL+ + V + +++ A+ L R+
Sbjct: 175 TAREYTAPLRAAGVDTLVLGCTHYPLLTGALSLVMGEDVTLVSSAEETAKDLYRELVRLG 234
Query: 239 THQTRVFDD------HALFLSGKPDIAMRRLMQGFG 268
H +G PD + G
Sbjct: 235 LEHPHSAAGSGQATRHRFAATGDPDHFQALARRFLG 270
>gi|254238598|ref|ZP_04931921.1| glutamate racemase [Pseudomonas aeruginosa C3719]
gi|126170529|gb|EAZ56040.1| glutamate racemase [Pseudomonas aeruginosa C3719]
Length = 265
Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats.
Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L
Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S + R L +G
Sbjct: 240 SALQEEMERILPILWG 255
>gi|306836771|ref|ZP_07469732.1| glutamate racemase [Corynebacterium accolens ATCC 49726]
gi|304567358|gb|EFM42962.1| glutamate racemase [Corynebacterium accolens ATCC 49726]
Length = 259
Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats.
Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 9/262 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + +P+ IY D PYG ++ +
Sbjct: 1 MPNASSPIGIFDSGVGGLTVARAVMEQLPQESVIYKGDTAHGPYGPRPISQVRAFSQDIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+++++ + VIACNTA + R + + L + PA+++A + T++G I ++
Sbjct: 61 DELVERG-CKMLVIACNTATAAFLHDARERY-DIPILEVIRPAVRRAMSTTRNGKIGVIG 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ +L + + VE + +I EG
Sbjct: 119 TEGTIKSGAYQDLF-AVNPNVEAVAAACPDFVPFVERGITAGR----QILGVAEGYLAPL 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246
+ + D +VL CTHYPL+ + + V + +S+ + LL +
Sbjct: 174 QAQGVDTLVLGCTHYPLLTGIIQLAMGENVSLVTSSEETTKDVMRLLTETDMLAPEGNQP 233
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
H+ +G P++ + + G
Sbjct: 234 VHSFESTGDPEVFAQLATRFLG 255
>gi|118619134|ref|YP_907466.1| glutamate racemase [Mycobacterium ulcerans Agy99]
gi|183984029|ref|YP_001852320.1| glutamate racemase MurI [Mycobacterium marinum M]
gi|166231044|sp|A0PUH6|MURI_MYCUA RecName: Full=Glutamate racemase
gi|229486244|sp|B2HQH3|MURI_MYCMM RecName: Full=Glutamate racemase
gi|118571244|gb|ABL05995.1| glutamate racemase MurI [Mycobacterium ulcerans Agy99]
gi|183177355|gb|ACC42465.1| glutamate racemase MurI [Mycobacterium marinum M]
Length = 271
Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++
Sbjct: 6 APVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEVRAHALAIGDDLVG 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKAL-VIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTRATIT 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I V+ VE + ++ EG + D
Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRSGVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF- 251
+VL CTHYPL+ + + + V + +++ A+ +L + + LF
Sbjct: 180 TLVLGCTHYPLLSGLIQLVMGDNVTLVSSAEETAKEVLRVLTERDILRPHDAPPATRLFE 239
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ M + G
Sbjct: 240 ATGDPEAFMALAARFLG 256
>gi|291299061|ref|YP_003510339.1| glutamate racemase [Stackebrandtia nassauensis DSM 44728]
gi|290568281|gb|ADD41246.1| glutamate racemase [Stackebrandtia nassauensis DSM 44728]
Length = 277
Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats.
Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 10/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL V + +R L+P +YV D PYG +++ + ++
Sbjct: 3 EAPIGIFDSGVGGLTVARAIRDLLPAERLLYVGDTARAPYGPRSIAQIRQYTLDACDYLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ L VIACNTA + +LR F + L + PA ++A T++G + ++ T AT
Sbjct: 63 GQGVKAL-VIACNTASSASLADLRERF-DVPVLEVIRPAARRAVTVTRNGRVGVIGTIAT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + HS + V+ VE ++ +G + +
Sbjct: 121 VTSGAYGDAFHS-APSVTLTSVACPAFVDFVERGVT----TGRQLLGLAQGYLEPLQRSQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFDDHA 249
D +VL CTHYPL+ + + V + +S+ AR +L + T H
Sbjct: 176 VDTLVLGCTHYPLLAGLIGLVMGDEVTLVSSSEEAARDVYKVLNERDLLRDNTLPAPAHR 235
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
+G R + GL
Sbjct: 236 FGATGDTGAFARLAQRVLGLP 256
>gi|108773872|gb|ABG16391.1| glutamate racemase [Yersinia pestis Nepal516]
gi|108778024|gb|ABG12082.1| glutamate racemase [Yersinia pestis Antiqua]
gi|145212464|gb|ABP41871.1| glutamate racemase [Yersinia pestis Pestoides F]
Length = 291
Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 4/264 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ +
Sbjct: 24 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 83
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 84 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 142
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 143 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 202
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 203 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 260
Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270
A ++ D A+ ++Q +G
Sbjct: 261 IAYCMALDEDTDALLPVLQSYGFP 284
>gi|227502996|ref|ZP_03933045.1| glutamate racemase [Corynebacterium accolens ATCC 49725]
gi|227076057|gb|EEI14020.1| glutamate racemase [Corynebacterium accolens ATCC 49725]
Length = 259
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 9/262 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + +P+ IY D PYG ++ +
Sbjct: 1 MPNASSPIGIFDSGVGGLTVARAVMEQLPQESVIYKGDTAHGPYGPRPISQVRAFSQDIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+++++ + VIACNTA + R + + L + PA+++A + T++G I ++
Sbjct: 61 DELVERG-CKMLVIACNTATAAFLHDARERY-DIPILEVIRPAVRRAMSTTRNGKIGVIG 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ +L + + VE + +I EG
Sbjct: 119 TEGTIKSGAYQDLF-AVNPNVEAVAAACPDFVPFVERGITAGR----QILGVAEGYLAPL 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ + D +VL CTHYPL+ + V + +S+ + LL +
Sbjct: 174 QAQGVDTLVLGCTHYPLLTGTIQLAMGENVSLVTSSEETTKDVMRLLTETDMLAPEGNQT 233
Query: 248 -HALFLSGKPDIAMRRLMQGFG 268
H+ +G P++ + + G
Sbjct: 234 VHSFESTGDPEVFAQLATRFLG 255
>gi|110801992|ref|YP_699819.1| glutamate racemase [Clostridium perfringens SM101]
gi|168213495|ref|ZP_02639120.1| glutamate racemase [Clostridium perfringens CPE str. F4969]
gi|123145852|sp|Q0SPY8|MURI_CLOPS RecName: Full=Glutamate racemase
gi|110682493|gb|ABG85863.1| glutamate racemase [Clostridium perfringens SM101]
gi|170715052|gb|EDT27234.1| glutamate racemase [Clostridium perfringens CPE str. F4969]
Length = 260
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 5/229 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ ++
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ Y + + L +E ++ +E+K + +
Sbjct: 126 TQEKFKNLMDKYGEHREVIPLPCPGLVEFIEAG----NLEGEEVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
IVL CTHYP + V + + VD +D S R + L N
Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTIRELKRRLEENNMQS 230
>gi|300741330|ref|ZP_07071351.1| glutamate racemase [Rothia dentocariosa M567]
gi|300380515|gb|EFJ77077.1| glutamate racemase [Rothia dentocariosa M567]
Length = 346
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 12/268 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 23 PAGPTSSAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 82
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGL 122
+ +++D + VIACNTA + + R + + + + PA ++A A T++
Sbjct: 83 IMDELVDSG-VKMLVIACNTASAAVLRDARERYTRHYGIPVIEVIQPAARRALAATRNRK 141
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++T AT+ + + + V+ VE+ E+ + E
Sbjct: 142 IGVIATEATVTSRAYEDTF-AIAPNLMVQSVACPRFVEFVEKGVTSGP----ELLRTAEE 196
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYPL+ + + V + ++D A+ L N
Sbjct: 197 YLQPLKDSGVDTLVLGCTHYPLLTGIISYIMGEDVTLVSSADETAKDVYRALLTENIENP 256
Query: 243 --RVFDDHALFLSGKPDIAMRRLMQGFG 268
H +G+ + + G
Sbjct: 257 DLETNPHHEFLATGESETFENLARRFLG 284
>gi|170026279|ref|YP_001722784.1| glutamate racemase [Yersinia pseudotuberculosis YPIII]
gi|229486286|sp|B1JQ44|MURI_YERPY RecName: Full=Glutamate racemase
gi|169752813|gb|ACA70331.1| glutamate racemase [Yersinia pseudotuberculosis YPIII]
Length = 287
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 84/264 (31%), Positives = 139/264 (52%), Gaps = 4/264 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ +
Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 80 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 198
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 199 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSSQDEN 256
Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270
A ++ D A+ ++Q +G
Sbjct: 257 IAYCMALDEDTDALLPVLQSYGFP 280
>gi|21957008|gb|AAM83917.1|AE013632_5 glutamate racemase [Yersinia pestis KIM 10]
gi|45437760|gb|AAS63309.1| putative glutamate racemase [Yersinia pestis biovar Microtus str.
91001]
Length = 299
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 4/264 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ +
Sbjct: 32 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 91
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 92 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 150
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 151 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 210
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 211 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 268
Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270
A ++ D A+ ++Q +G
Sbjct: 269 IAYCMALDEDTDALLPVLQSYGFP 292
>gi|239917359|ref|YP_002956917.1| glutamate racemase [Micrococcus luteus NCTC 2665]
gi|281414158|ref|ZP_06245900.1| glutamate racemase [Micrococcus luteus NCTC 2665]
gi|239838566|gb|ACS30363.1| glutamate racemase [Micrococcus luteus NCTC 2665]
Length = 310
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 57/276 (20%), Positives = 103/276 (37%), Gaps = 16/276 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ I +FDSG+GGL V + + +P +YV D PYG ++
Sbjct: 1 MSGRLAAVDATAPIGVFDSGVGGLTVARAIMDQLPHESILYVGDTEHSPYGPRPIAEVRA 60
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYT 118
+ + +++ + L VIACN+A + + R + + + + PA+++A A T
Sbjct: 61 LALAIMDELVARGVKAL-VIACNSASAAVLRDARERYTGGHGIPVIEVIQPAVRRAVAAT 119
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++G I ++ T AT+ + + I V+ VE E+ +
Sbjct: 120 RTGRIGVIGTEATVGSRAYEDSFSA-APHLAITSVACPRFVEFVEAGIT----TGPELLE 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VL CTHYPL+ + V + +++ A+ L R+
Sbjct: 175 TAREYTAPLRAAGVDTLVLGCTHYPLLTGALSLVMGEDVTLVSSAEETAKDLYRELVRLG 234
Query: 239 THQTRVFDD------HALFLSGKPDIAMRRLMQGFG 268
H +G PD + G
Sbjct: 235 LEHPHSAAGSGQATRHRFAATGDPDHFQALARRFLG 270
>gi|260890743|ref|ZP_05902006.1| glutamate racemase [Leptotrichia hofstadii F0254]
gi|260859621|gb|EEX74121.1| glutamate racemase [Leptotrichia hofstadii F0254]
Length = 261
Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 59/251 (23%), Positives = 106/251 (42%), Gaps = 11/251 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSGIGGL VL+++R ++P Y D PYG + + + +L+K
Sbjct: 2 SIGVFDSGIGGLTVLKEIRKVLPNEKIYYFGDTARVPYGEKTKELIIRYSKEIVEFLLEK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133
V+ACNTA L EL+ F + +G + A + A T+S I ++ T AT++
Sbjct: 62 -DVSAIVVACNTATALALKELKEIFK-IPIIGVIEAGARTAINTTKSNEIGVIGTKATIK 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + + + VEE K+ IK ++ D
Sbjct: 120 SEKYIEEIKLFNPKVKVFQKACPLFVPAVEEGILSGKLVNQIIKTYLDDF-----EGEID 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LF 251
++L CTHYPL+ ++ P + +D + A + +L + + + +
Sbjct: 175 TLILGCTHYPLLKDAISKIYP-DIKIVDPAKETALDLKSILQKNKFLKNDALKNEEVDYY 233
Query: 252 LSGKPDIAMRR 262
++ +
Sbjct: 234 VTDGQEKFKEI 244
>gi|116052807|ref|YP_793124.1| glutamate racemase [Pseudomonas aeruginosa UCBPP-PA14]
gi|122257182|sp|Q02G12|MURI_PSEAB RecName: Full=Glutamate racemase
gi|115588028|gb|ABJ14043.1| glutamate racemase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 265
Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R + +L
Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 65 EQGAKAL-VLACNTATAAAAAELRERYPQVQLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIEAG----DLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|296111814|ref|YP_003622196.1| glutamate racemase [Leuconostoc kimchii IMSNU 11154]
gi|295833346|gb|ADG41227.1| glutamate racemase [Leuconostoc kimchii IMSNU 11154]
Length = 280
Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL V++ + +P FI++ D PYG + + + +
Sbjct: 2 NKNNPIGMVDSGVGGLTVIKAAQKQLPNEQFIFIGDTARMPYGPRTTDEVIAYTLQMANF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
++++ L VIACNTA L+ S+ +G + P K A T++ I +++T
Sbjct: 62 LVNEKHIKLLVIACNTATARALSVLQDQL-SIPVIGVIQPGAKAAQLATKNKKIGVIATQ 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ +H Y SQ + + VE K DE +K + +
Sbjct: 121 GTVTSEAYDVQLHHYNSQITVVSQAEPEFVQTVELN----KYHSDEARKLVNSHLATLKA 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFDD 247
+ D ++L CTH+PL+ + V +D+ + + L + + +D
Sbjct: 177 AKIDTLILGCTHFPLLTPFIKSAIGENVTLIDSGQETVQVIQDCLAQSHLSTVSKHDHND 236
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ +G P +
Sbjct: 237 DVYYTTGDPVLFKAIATDWL 256
>gi|311113410|ref|YP_003984632.1| glutamate racemase [Rothia dentocariosa ATCC 17931]
gi|310944904|gb|ADP41198.1| glutamate racemase [Rothia dentocariosa ATCC 17931]
Length = 346
Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 12/268 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 23 PAGPTSSAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 82
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGL 122
+ +++D + VIACNTA + + R + + + + PA ++A A T++
Sbjct: 83 IMDELVDSG-VKMLVIACNTASAAVLRDARERYTRHYGIPVIEVIQPAARRALAATRNRK 141
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++T AT+ + + + V+ VE+ E+ + E
Sbjct: 142 IGVIATEATVTSRAYEDTF-AIAPNLMVQSVACPRFVEFVEKGVTSGP----ELLRTAEE 196
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ R D +VL CTHYPL+ + + V + ++D A+ L N
Sbjct: 197 YLQPLKDSRVDTLVLGCTHYPLLTGIISYIMGEGVTLVSSADETAKDVYRALLTENIENP 256
Query: 243 --RVFDDHALFLSGKPDIAMRRLMQGFG 268
H +G+ + + G
Sbjct: 257 DLETNPHHEFLATGESETFENLARRFLG 284
>gi|169628573|ref|YP_001702222.1| glutamate racemase [Mycobacterium abscessus ATCC 19977]
gi|169240540|emb|CAM61568.1| Probable glutamate racemase MurI [Mycobacterium abscessus]
Length = 282
Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++
Sbjct: 3 DAPIGIFDSGVGGLTVARAIIDQLPDEDILYVGDTGNGPYGPLTIPEIRTHALTIGDDLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ L VIACNTA + R + + + V PA+++A T + I ++ T AT
Sbjct: 63 GRGVKAL-VIACNTASAACLRDARERYAPVPVIEVVLPAVRRAVHTTHNNKIGVIGTEAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + I V+ VE + ++ + EG + +
Sbjct: 122 IASGAYQDAFAA-ARDTEITAVACPRFVDFVERGITSGR----QVLQLAEGYLEPLQRAQ 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR------VF 245
D +VL CTHYPL+ + + V + +++ A+ +L + +
Sbjct: 177 VDTVVLGCTHYPLLSGLIQLAMGEDVTLVSSAEETAKDLLRVLSEKDLLRPHPERPGTAS 236
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
+ +G P+ + G
Sbjct: 237 PNRVFEATGDPEAFRALAARFLG 259
>gi|226311374|ref|YP_002771268.1| glutamate racemase [Brevibacillus brevis NBRC 100599]
gi|226094322|dbj|BAH42764.1| probable glutamate racemase [Brevibacillus brevis NBRC 100599]
Length = 270
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I + DSG+GGL V +++ +PE +YV D+ PYG+ ++ + D +
Sbjct: 4 ERAIAVIDSGVGGLTVAKEVMRQLPEERIVYVGDNARCPYGSKSPEEIRTYSFQMI-DYV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ VIACNTA ++ +E P + +G + P + A T++G I ++ T T
Sbjct: 63 MRTPLKALVIACNTATAVVLEEAIGDLP-LPVIGVIEPGARAAVQVTKNGRIGVIGTETT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + ++ ++ VE + +E ++ ++ +
Sbjct: 122 IRTKAYERALLRIQPDLYVAGMACPAFVPLVESHMANT----EEARRVVKETLAPFLHED 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + ++ V +++++ AR + + +H
Sbjct: 178 LDTLILGCTHYPLLAPIISEVMGDRVRLINSAEETARELSLQIATDAERKQIERPEHLFV 237
Query: 252 LSGKPDIAMRRLMQGF 267
SG + +
Sbjct: 238 TSGDANKFRTIAEEWL 253
>gi|78357785|ref|YP_389234.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220190|gb|ABB39539.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 285
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 8/267 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M+I++ C+ + I +FDSG+GGL VL+ +R MP +Y+ D PYG +
Sbjct: 1 MQIESG-CDSRRDLPIGMFDSGVGGLTVLKALRRRMPCESILYLGDTARLPYGTKSAETV 59
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + + ++++ L V+ACNT + LR+ +P + +G V P + + +
Sbjct: 60 TRYALQASARLVER-DIKLLVVACNTVSATALEPLRNAYPGIPVIGVVQPGAQASCRASA 118
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+G I++++T +T+R IH+ + EE + E +
Sbjct: 119 TGRIAVIATESTIRGRAYERAIHAIRPDAQTTGAPCPLFVPLAEEGWLDGPLVEGIAARY 178
Query: 180 IEGCFIEKEGKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
+ F G D +VL CTH+PL+ R + V +D++ A+ L
Sbjct: 179 LNPIFHPASGSGRPETPDCLVLGCTHFPLLAGAIRNVIGDGVTIVDSAAITAKAVEAELR 238
Query: 236 RINTHQTRVF-DDHALFLSGKPDIAMR 261
+ + + R
Sbjct: 239 ARGLERRATECGETRFMATDDVPRFSR 265
>gi|289422435|ref|ZP_06424278.1| glutamate racemase [Peptostreptococcus anaerobius 653-L]
gi|289157007|gb|EFD05629.1| glutamate racemase [Peptostreptococcus anaerobius 653-L]
Length = 268
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 106/265 (40%), Gaps = 16/265 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSG+GGL VL+++ + +Y D PYG + K
Sbjct: 1 MDNRP--------IGVFDSGLGGLTVLREIHKRLANEDTVYFGDTARVPYGPRSKETIIK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSG 121
+ ++ + VIACNTA +E ++ + ++ +G + A + A YT +
Sbjct: 53 YTFQAINFLI-QQDVKAIVIACNTATARALEEAKAEY-NVPIIGVIEAGARSAVEYTNNK 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++ ++ T T+ N I S + + + VEE +I ++
Sbjct: 111 VVGVIGTLGTINSKAYVNTIRSMDESIRVIDKACPLFVPLVEEGWANEEISSTAAHMYLD 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
E K D IVL CTHYP++ + ++ + A + +L + N
Sbjct: 171 ----ELVEKGVDSIVLGCTHYPILKRTIGMAVGQEIKLINPAKETALELKEILNQANLLN 226
Query: 242 TRVFDD-HALFLSGKPDIAMRRLMQ 265
+ + ++S + + +
Sbjct: 227 DKADEGVCKYYVSDINEQFSKVASE 251
>gi|241663373|ref|YP_002981733.1| glutamate racemase [Ralstonia pickettii 12D]
gi|240865400|gb|ACS63061.1| glutamate racemase [Ralstonia pickettii 12D]
Length = 280
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 6/248 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ Q + +FDSG+GGL VL+ + +P +Y+AD PYG + +R + +
Sbjct: 1 MTTRAQAPVGVFDSGLGGLSVLRAISAELPAESLLYLADSRHAPYGEKSPEFIAERTLRV 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+
Sbjct: 61 CEWLVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T +TLR + L+ + C + L +E + + ++
Sbjct: 119 TESTLRSEKFARLLAAASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLQAYLQPM 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTHYP + R+++ + +D ++AR L +
Sbjct: 175 LDAHADTLVLGCTHYPFLEDAIREIAGDRLTLIDTGHAVARHLGRTLSAAGLRSSDQAAS 234
Query: 248 HALFLSGK 255
+G
Sbjct: 235 PRFMSTGD 242
>gi|313201826|ref|YP_004040484.1| glutamate racemase [Methylovorus sp. MP688]
gi|312441142|gb|ADQ85248.1| glutamate racemase [Methylovorus sp. MP688]
Length = 297
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 6/234 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + +FDSG+GGL VL +R +P+ IY AD + PYG+ + R + L ++
Sbjct: 35 DSPVGVFDSGVGGLSVLAHIRQALPQESLIYAADSMHAPYGSKSQAFIIDRAIQLSDFLI 94
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA ELRS + ++ +G PA+K AAA T+SG+I +L+T TL
Sbjct: 95 SRGAKAL-VVACNTATAAAISELRSRY-AIPIIGMEPAVKPAAAATRSGVIGVLATSGTL 152
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ SY Q + + + L +E +++ + ++ +E
Sbjct: 153 QSAQFAALLESYGRQVRVETQACVGLVECIERG----ELQTADTRQLLEKYIQPLLEAGA 208
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D +VL CTHYP + + +L+ V +D ++AR+ + L + + +
Sbjct: 209 DTLVLGCTHYPFVRPLIEELAGPEVAIIDTGAAVARQLKHRLQEADLLKDDSYK 262
>gi|186893477|ref|YP_001870589.1| glutamate racemase [Yersinia pseudotuberculosis PB1/+]
gi|229486285|sp|B2JZF9|MURI_YERPB RecName: Full=Glutamate racemase
gi|186696503|gb|ACC87132.1| glutamate racemase [Yersinia pseudotuberculosis PB1/+]
Length = 287
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 84/264 (31%), Positives = 138/264 (52%), Gaps = 4/264 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ +
Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 80 VTAVQQSHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEAAETKLHGGVVPLEVLKKILHPWLSMR 198
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 199 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 256
Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270
A ++ D A+ ++Q +G
Sbjct: 257 IAYCMALDEDTDALLPVLQSYGFP 280
>gi|297583708|ref|YP_003699488.1| glutamate racemase [Bacillus selenitireducens MLS10]
gi|297142165|gb|ADH98922.1| glutamate racemase [Bacillus selenitireducens MLS10]
Length = 280
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q I + DSG+GGL V+ ++ +P+ IY+ D PYG + + + +
Sbjct: 1 MQRPIGVIDSGVGGLTVVSELMRQLPKEEIIYIGDTKRCPYGPRPAFEVAEYTWEMIDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ + L VIACNTA ++ D+ R + +G + P A T++ + ++ T
Sbjct: 61 MSR-DIKLLVIACNTASAVVLDDARQAL-DIPVIGVIHPGAVAALKATENLEVGVIGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + S + + ++ L VE + +E K I
Sbjct: 119 TISSGAYYEELKSIHNDVKVVSLACPTLVPLVESN----RYTGEEAKAVIREALEPMLDY 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
D ++L CTHYP+I + + + + + D AR LL T H
Sbjct: 175 PVDSLILGCTHYPMIEREIQDVVGEDIHVICSGDETARAVSTLLYHEQLLYTGERRPRHL 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ +G +
Sbjct: 235 FYTTGAKAMFQSIAESWL 252
>gi|18311550|ref|NP_563484.1| glutamate racemase [Clostridium perfringens str. 13]
gi|20177975|sp|Q8XHB7|MURI_CLOPE RecName: Full=Glutamate racemase
gi|18146234|dbj|BAB82274.1| probable glutamate racemase [Clostridium perfringens str. 13]
Length = 260
Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 6/242 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ ++
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 67 KKGA-KAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ Y + + L +E ++ +++K + +
Sbjct: 126 TQEKFKNLMDKYGEHREVIPLPCPGLVEFIEAG----DLEGEDVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251
IVL CTHYP + V + L VD +D S R + L N +++ + +F
Sbjct: 182 SSIVLGCTHYPFVKDVIQDLVGEKVDIIDGSSGTIRELKRRLEENNMESESKKKGNLDIF 241
Query: 252 LS 253
S
Sbjct: 242 NS 243
>gi|294670141|ref|ZP_06735066.1| glutamate racemase [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291308068|gb|EFE49311.1| glutamate racemase [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 270
Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + +Y D PYG ++ + +L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPLENIVYFGDTARVPYGVKSRATIETFTAQIVGFML 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A QAA A T++ I +++T T
Sbjct: 66 E-HDVKALVIACNTIAAVAGHKVRQMAGNMPVLDVISAGAQAALATTRNNHIGVIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + + + VEE ++ ++ ++ E
Sbjct: 125 VNSNAYAREIHRRNPAARVQSQACPLFVPLVEEGWLDHEVTRLTAREYLKPLLAE----D 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHA 249
D +VL CTHYPL+ + +Q +P + +D++ + A L T D+
Sbjct: 181 VDTLVLGCTHYPLLKPLLQQEAP-QLQLVDSALTTAEAVAQALQAEGLLNDGTGQTADYR 239
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 240 FYVSDIPLRFQTIGERFLG 258
>gi|29653649|ref|NP_819341.1| glutamate racemase [Coxiella burnetii RSA 493]
gi|161830181|ref|YP_001596247.1| glutamate racemase [Coxiella burnetii RSA 331]
gi|29540911|gb|AAO89855.1| glutamate racemase [Coxiella burnetii RSA 493]
gi|161762048|gb|ABX77690.1| glutamate racemase [Coxiella burnetii RSA 331]
Length = 280
Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 4/256 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S IL
Sbjct: 5 RPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS-ILI 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
L V+ACNTA T +L+ F + +G V P + A T++ +++L+T T+
Sbjct: 64 AQNIKLLVVACNTASTAALPQLQQQFSHIPIIGVVEPGARAAVVATKNNKVALLATETTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + + Q I + + + EE +I KK +E +
Sbjct: 124 QSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPIINGY--HQC 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTH+P+++ + ++ ++++ + A + +L + N + +
Sbjct: 182 DSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTLSFLV 241
Query: 253 SGKPDIAMRRLMQGFG 268
+ P+ R FG
Sbjct: 242 TDSPERFTRIGEIFFG 257
>gi|53804366|ref|YP_113738.1| glutamate racemase [Methylococcus capsulatus str. Bath]
gi|81682254|sp|Q609F9|MURI_METCA RecName: Full=Glutamate racemase
gi|53758127|gb|AAU92418.1| glutamate racemase [Methylococcus capsulatus str. Bath]
Length = 271
Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 120/253 (47%), Gaps = 7/253 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I +FDSG+GGL VL+++R ++P + +YVAD PYGN +++R + + +L
Sbjct: 5 EHPIGVFDSGVGGLSVLREIRAVLPHENLLYVADSGHLPYGNKPAEYIEQRALTVGRFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +R+ F + +G P +K A A ++S ++ +L+T TL
Sbjct: 65 SRGA-KAIVVACNTATAAAITVMRAEFR-VPVIGMEPGLKPAVALSKSLVVGVLATEGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +L+ + + + +VE G D +++ E +
Sbjct: 123 KSAKFRDLVGRTTEKVEVIAQACPGWVEQVERGDLGSPATRDLVRRYTEPAL----ERGA 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP + + ++ V ++ ++AR R L R+ LF
Sbjct: 179 DTLVLGCTHYPFLAGLIADVAGPDVHIVETGSAVARHLRRRLEADGLLTRRMAPGVELFW 238
Query: 253 SGKP-DIAMRRLM 264
S P ++A R L
Sbjct: 239 SSGPAEVAGRSLA 251
>gi|294142952|ref|YP_003558930.1| glutamate racemase [Shewanella violacea DSS12]
gi|293329421|dbj|BAJ04152.1| glutamate racemase [Shewanella violacea DSS12]
Length = 291
Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 23/277 (8%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L IL+FDSGIGGL +L ++R +P ++IY+ D+ PYG + L + L +D
Sbjct: 14 LSKPILVFDSGIGGLTILDEIRLALPNENYIYLFDNARLPYGELGEQELISGSVSLITDF 73
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + +IACNTA TLI LR+ ++ +G VPAIK AA ++ I +L+TP T
Sbjct: 74 VKNESVSMVIIACNTASTLILPSLRAAL-NIPVVGVVPAIKPAALLSKKKHIGLLATPGT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++RTYT LI + +C + L +S L E+ A G + + ++ + + + +
Sbjct: 133 IKRTYTHELIEQFAGECKVDLYASSELVLLAEQKAAGHPVTQQQLARILSPIYQSEL--- 189
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-------LPRINTHQTRV 244
D +VL CTH+P++ ++ + LD+ ++A R L L + +
Sbjct: 190 -DTLVLGCTHFPILRQEMQEYLGDKISLLDSGKAVAARVVTLKLKAQQKLVQAEWDKDET 248
Query: 245 FD-----------DHALFLSGKPDIAMRRLMQGFGLK 270
+ + A F S + +++ + FG
Sbjct: 249 NEGLEQEGDCSRTELAYFTSQSIEKGLKKTLAKFGFS 285
>gi|150261128|ref|ZP_01917856.1| putative glutamate racemase [Yersinia pestis CA88-4125]
gi|153947950|ref|YP_001399143.1| glutamate racemase [Yersinia pseudotuberculosis IP 31758]
gi|161484906|ref|NP_667666.2| glutamate racemase [Yersinia pestis KIM 10]
gi|161511329|ref|NP_994432.2| glutamate racemase [Yersinia pestis biovar Microtus str. 91001]
gi|162100189|ref|YP_650027.2| glutamate racemase [Yersinia pestis Antiqua]
gi|162139457|ref|YP_645991.2| glutamate racemase [Yersinia pestis Nepal516]
gi|162202299|ref|YP_001164844.2| glutamate racemase [Yersinia pestis Pestoides F]
gi|218930909|ref|YP_002348784.1| glutamate racemase [Yersinia pestis CO92]
gi|229839605|ref|ZP_04459764.1| glutamate racemase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841690|ref|ZP_04461846.1| glutamate racemase [Yersinia pestis biovar Orientalis str. India
195]
gi|229896694|ref|ZP_04511859.1| glutamate racemase [Yersinia pestis Pestoides A]
gi|229904756|ref|ZP_04519867.1| glutamate racemase [Yersinia pestis Nepal516]
gi|20177979|sp|Q8ZAA2|MURI_YERPE RecName: Full=Glutamate racemase
gi|167017322|sp|A7FD15|MURI_YERP3 RecName: Full=Glutamate racemase
gi|115349520|emb|CAL22494.1| putative glutamate racemase [Yersinia pestis CO92]
gi|149290536|gb|EDM40613.1| putative glutamate racemase [Yersinia pestis CA88-4125]
gi|152959445|gb|ABS46906.1| glutamate racemase [Yersinia pseudotuberculosis IP 31758]
gi|229678874|gb|EEO74979.1| glutamate racemase [Yersinia pestis Nepal516]
gi|229691029|gb|EEO83082.1| glutamate racemase [Yersinia pestis biovar Orientalis str. India
195]
gi|229695971|gb|EEO86018.1| glutamate racemase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700301|gb|EEO88335.1| glutamate racemase [Yersinia pestis Pestoides A]
gi|320013493|gb|ADV97064.1| glutamate racemase [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 287
Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 4/264 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ +
Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 80 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 198
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 199 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 256
Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270
A ++ D A+ ++Q +G
Sbjct: 257 IAYCMALDEDTDALLPVLQSYGFP 280
>gi|167760730|ref|ZP_02432857.1| hypothetical protein CLOSCI_03115 [Clostridium scindens ATCC 35704]
gi|167661617|gb|EDS05747.1| hypothetical protein CLOSCI_03115 [Clostridium scindens ATCC 35704]
Length = 281
Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 8/250 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL V +++ +P + +Y D PYG+ + + + L+
Sbjct: 17 APVGVFDSGVGGLTVAREIMRQLPMENVVYFGDTARVPYGSKSRDNIIRFSRQII-RFLE 75
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
VIACNTA L D ++ + +G + P + A T++G I ++ T AT+
Sbjct: 76 TKNVKAIVIACNTASALALDTVQKE-TDVPVIGVIGPGARAAVKETRNGQIGVVGTEATI 134
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + +IHS + + + VEE KI E+ I+ + + +
Sbjct: 135 QSETYTKVIHSLNPEASVIGKPCPLFVPLVEEGFAKHKITEEA----IDFYLSDMKSTQI 190
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251
D ++L CTHYPL+ + ++ + A + L +Q+ + + +
Sbjct: 191 DTMILGCTHYPLLRSKIMAYFGEEIHIVNPAYETAMDLKAALNDCGIANQSGIPATYEFY 250
Query: 252 LSGKPDIAMR 261
+S +
Sbjct: 251 VSDAAQKFTK 260
>gi|297250774|ref|ZP_06865032.2| glutamate racemase [Neisseria polysaccharea ATCC 43768]
gi|296837995|gb|EFH21933.1| glutamate racemase [Neisseria polysaccharea ATCC 43768]
Length = 327
Score = 289 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 123
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 124 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 183 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 238
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 239 IDTLVLGCTHFPLLKPLISREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 298 YVSDIPLKFRTIGERFLG 315
>gi|150026137|ref|YP_001296963.1| glutamate racemase [Flavobacterium psychrophilum JIP02/86]
gi|149772678|emb|CAL44161.1| Glutamate racemase [Flavobacterium psychrophilum JIP02/86]
Length = 259
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 8/252 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I +FDSGIGG + +++ L+P + IY+AD PYG + + ++
Sbjct: 4 NNPIGLFDSGIGGTSIWKEIHQLLPNENTIYLADSKNAPYGKKSKQEIIELCFKNIDYLV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA T ++R + + +G PAIK AA TQ+ I IL+T T+
Sbjct: 64 SQ-NCKMIVVACNTATTNAIIQIREKYK-IPIIGIEPAIKPAANKTQTQTIGILATKGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + SY + I L +E +I+ E+ K +
Sbjct: 122 NSELFNKQVESY-TNIKIIEQIGYGLVELIENG----EIESPEMTKLLTSYLEPMIKANI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-LF 251
D +VL C+HYP +V +++ P + +D+ ++AR+ + +L + N T + +
Sbjct: 177 DYLVLGCSHYPYLVPAIKKIIPENIKIIDSGQAVARQTKTILEKNNLLNTTTKNSQQIFY 236
Query: 252 LSGKPDIAMRRL 263
+ P + L
Sbjct: 237 ANSNPTVLKNIL 248
>gi|85860927|ref|YP_463129.1| glutamate racemase [Syntrophus aciditrophicus SB]
gi|123517831|sp|Q2LXZ9|MURI_SYNAS RecName: Full=Glutamate racemase
gi|85724018|gb|ABC78961.1| glutamate racemase [Syntrophus aciditrophicus SB]
Length = 270
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 113/256 (44%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL V++ + +P + +Y D PYG + + +L +
Sbjct: 10 PIGVFDSGVGGLTVVRALMERLPFENILYFGDTARVPYGVKSVETINAYARQITEFLL-R 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133
+ L +IACNT + + + + + L + A ++A A T++ + ++ TP T+
Sbjct: 69 QEVKLLIIACNTMAAVARQSV-ESLSPVPVLDVIDAGARRAVAETRTHSVGVIGTPTTIN 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I + I + +L VEE + ++ + E D
Sbjct: 128 SNAYARAICRLAPETRIFSQACALLVPLVEEGWLDHPVTRLTAQEYLRPVLAE----HID 183
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALFL 252
+VL CTHYPL+ + + ++ + +D+++++A LL + T+ R+ ++ ++
Sbjct: 184 TLVLGCTHYPLLKALLQDVAGPDIHLVDSAEAMADATAELLQVQHLTNPERIPPEYRFYV 243
Query: 253 SGKPDIAMRRLMQGFG 268
+ P + + G
Sbjct: 244 TDVPLRFQQIGERFLG 259
>gi|307246771|ref|ZP_07528839.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|307255755|ref|ZP_07537558.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307260207|ref|ZP_07541916.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|306852346|gb|EFM84583.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|306861315|gb|EFM93306.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306865752|gb|EFM97631.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
Length = 267
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 134/261 (51%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAIKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K + +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEW---QTHPT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPKVKFFIDPGNGIANRVATLLSEFSLENSAQNKENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKMDEEFSKREIIMQQWGFK 257
>gi|315633799|ref|ZP_07889089.1| glutamate racemase [Aggregatibacter segnis ATCC 33393]
gi|315477841|gb|EFU68583.1| glutamate racemase [Aggregatibacter segnis ATCC 33393]
Length = 278
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 85/261 (32%), Positives = 134/261 (51%), Gaps = 9/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL FDSG+GGL V Q+++ L+P+YH++Y D+ FPY + + +R + + I
Sbjct: 6 KPTILFFDSGVGGLSVYQEVKQLLPDYHYLYCFDNAYFPYSEKPEEGIVERTLKICQRIE 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACNTA T++ LR F S+ +G VPAIK AA T++ I +L+T T+
Sbjct: 66 KLCPLDLIVIACNTASTVVLPVLRKHF-SIPIVGTVPAIKPAAEQTKTKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R Y S+LI Y S C + + S L E G I +EIK E+ +
Sbjct: 125 KRQYLSDLIDKYASFCQVEKIGSTKLVELAEHKLHGYPIDLNEIKAELSEW---ENIPDL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ +Q P ++D+ +IA+R + LL + +
Sbjct: 182 DAVVLGCTHFPLLKSEIQQCLPQVKYFIDSGAAIAKRVKSLLKDVKVRSKNQMNSQVFCT 241
Query: 253 SGKP---DIAMRRLMQGFGLK 270
KP + ++ L+ G +
Sbjct: 242 --KPLVKEDSLLELIHSLGFE 260
>gi|296268925|ref|YP_003651557.1| glutamate racemase [Thermobispora bispora DSM 43833]
gi|296091712|gb|ADG87664.1| glutamate racemase [Thermobispora bispora DSM 43833]
Length = 277
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I IFDSG+GGL V + + +P YVAD PYG +++ + + ++
Sbjct: 3 SGAIGIFDSGVGGLTVARAIIDQLPNESIFYVADTARQPYGPKPIAKVREYALEVMDHLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ ++ + VIACN+A + + R + PA+++A T++ + ++ T AT+
Sbjct: 63 E-HEVKMLVIACNSASAAVLRDARERYSVPVVEVIQPAVRRAVRVTKNRKVGVIGTRATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V++ +L VE K E+ + I G
Sbjct: 122 ESMAYHDAFAA-APDIELVAVAAPLLVEFVERGETMSK----ELIEVIRGYLKPILDAGC 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A+ +L H
Sbjct: 177 DTLILGCTHYPLLTGAISYVAGDGVTLVSSAEETAKDVYRILHDRGMFNAEAEPFHRFRA 236
Query: 253 SGKPDIAMRRLMQGFG 268
+G + R + G
Sbjct: 237 TGDTALFARLGRRFLG 252
>gi|190151197|ref|YP_001969722.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|303252719|ref|ZP_07338881.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307248913|ref|ZP_07530924.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|307264546|ref|ZP_07546130.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|229486230|sp|B3GZ94|MURI_ACTP7 RecName: Full=Glutamate racemase
gi|189916328|gb|ACE62580.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|302648458|gb|EFL78652.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|306854608|gb|EFM86800.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|306870145|gb|EFN01905.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 267
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 134/261 (51%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K + +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEW---QTHPT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPKVKFFIDPGNGIANRVATLLSEFSLENSAQNKENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKMDEEFSKREIIMQQWGFK 257
>gi|255321272|ref|ZP_05362438.1| glutamate racemase [Acinetobacter radioresistens SK82]
gi|255301826|gb|EET81077.1| glutamate racemase [Acinetobacter radioresistens SK82]
Length = 276
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGGL V Q++ +P +Y AD PYG D +++ + L
Sbjct: 7 DAPIGIFDSGIGGLSVAQEIARHLPHEQILYYADTAHVPYGPRSDQNIRELTAQAI-EWL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ +V+ACNTA D LR + S +G VPA+K A +++ ++++L+TPAT
Sbjct: 66 YRQGCKAAVVACNTASAFSLDYLRKHYGESFPIIGLVPALKPAVLQSKTKVVAVLATPAT 125
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R ++I + + + ++ + L VE+ + + +KK ++
Sbjct: 126 FRGNLIKDVIERFAMPTGVKVLPITCLELVPLVEQGLQMSQQCLNTLKKILQ----PVVE 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYP + + + + +D+ ++AR+ +L + + +
Sbjct: 182 QGADHLVLGCTHYPFLKPAIQAIFGQQLTLVDSGQAVARQTARILIKNELLGEQTCESET 241
Query: 249 --ALFLSGKPDIAMRRLMQGF 267
++SG ++ ++Q
Sbjct: 242 RIQCYVSGHNAENLKPILQHL 262
>gi|307257940|ref|ZP_07539694.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306863587|gb|EFM95516.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
Length = 267
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K + +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEW---QTHPT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D IA R LL + + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPKVKFFIDPGSGIANRVATLLSEFSLENSAQNKENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKMDEEFSKREIIMQQWGFK 257
>gi|90961813|ref|YP_535729.1| glutamate racemase [Lactobacillus salivarius UCC118]
gi|90821007|gb|ABD99646.1| Glutamate racemase [Lactobacillus salivarius UCC118]
Length = 256
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K
Sbjct: 1 MTNKKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEK 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++
Sbjct: 61 VEHLLS-YNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMA 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TL+ ++L++ YV++ I + + L +E + E++ +
Sbjct: 120 TPLTLKEKKFNDLMNKYVTEADIRKIPAPDLVEFIESG----DVDSPELETYLRNLLSPY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D IVL CTH+P V +++ +D + AR + LL + N +
Sbjct: 176 KDS--DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKG 233
Query: 248 HALFLSGKPDIAMRRLMQGF 267
F + + L Q
Sbjct: 234 SVKFENSRNTKEELELSQKL 253
>gi|269213840|ref|ZP_05982968.2| glutamate racemase [Neisseria cinerea ATCC 14685]
gi|269145167|gb|EEZ71585.1| glutamate racemase [Neisseria cinerea ATCC 14685]
Length = 293
Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 12/269 (4%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
K++N Q I +FDSGIGGL ++ + +P + IY D PYG ++
Sbjct: 23 KMEN----IGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIE 78
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQS 120
M + +L+ + VIACNT + ++R +M L + A K A A T++
Sbjct: 79 HFSMQIVDFLLE-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRN 137
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I I++T T+ + IH + ++ +L VEE ++ + + +
Sbjct: 138 NKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYL 197
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ + + + V +D++ + A +L +
Sbjct: 198 KPLLAD----GIDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLL 252
Query: 241 QT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
T D+ ++S P + G
Sbjct: 253 NTDNNNPDYRFYVSDIPLKFRTIGERFLG 281
>gi|51594484|ref|YP_068675.1| glutamate racemase [Yersinia pseudotuberculosis IP 32953]
gi|81640781|sp|Q66G56|MURI_YERPS RecName: Full=Glutamate racemase
gi|51587766|emb|CAH19366.1| putative glutamate racemase [Yersinia pseudotuberculosis IP 32953]
Length = 287
Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats.
Identities = 84/264 (31%), Positives = 138/264 (52%), Gaps = 4/264 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ +
Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 80 VTAVQQSHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 198
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 199 EP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 256
Query: 248 HALFLSGKPDI-AMRRLMQGFGLK 270
A ++ D A+ ++Q +G
Sbjct: 257 IAYCMALDEDTDALLPVLQSYGFP 280
>gi|301301177|ref|ZP_07207333.1| glutamate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851176|gb|EFK78904.1| glutamate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 256
Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K
Sbjct: 1 MTNKKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEK 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++
Sbjct: 61 VEHLLS-YNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMA 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TL+ ++L++ YV++ I + + L +E + E++ +
Sbjct: 120 TPLTLKEKKFNDLMNKYVTEADIRKIPAPDLVEFIESG----DVDSPELETYLRKLLNPY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D IVL CTH+P V +++ +D + AR + LL + N +
Sbjct: 176 KDS--DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKG 233
Query: 248 HALFLSGKPDIAMRRLMQGF 267
F + K L Q
Sbjct: 234 SVKFENSKNTKEELELSQKL 253
>gi|237728080|ref|ZP_04558561.1| glutamate racemase [Citrobacter sp. 30_2]
gi|226910337|gb|EEH96255.1| glutamate racemase [Citrobacter sp. 30_2]
Length = 283
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 147/272 (54%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSEEFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T AT++R+YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 128 GVVGLLATRATVKRSYTHELIARFANECQIAMLGSAELVELAEAKLHGETVSLEELRRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWL--RMSEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
++ A ++ + + ++Q +G K+
Sbjct: 246 AKSTDENVAFCMAMTTEAEQLLPVLQRYGFKT 277
>gi|317495245|ref|ZP_07953615.1| glutamate racemase [Gemella moribillum M424]
gi|316914667|gb|EFV36143.1| glutamate racemase [Gemella moribillum M424]
Length = 264
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 107/258 (41%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++N+I +FDSG+GGL V +++ +P Y D PYG+ + K +
Sbjct: 1 MKNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTKDEIIKNTEKAVEFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+++ + V+ACNTA + L+ + ++ +G V P ++A T++ + +L T
Sbjct: 61 INQG-VKMIVLACNTATAAALEYLQDRY-NLPIIGVVQPGARRAIQATENNNVLVLGTQF 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T I + S ++ + +E + E +K ++ + +
Sbjct: 119 TADSKVYDKEIKNINSDIVVYDKACPTFCPFIE---AEGNLVEGATQKLLKDVLFDTKLL 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
D +VL CTHYP++ + + + + AR +L Q ++ +H
Sbjct: 176 DIDTVVLGCTHYPILKKDIEEYYGNNIKVISSGHEAARDVSTVLGYAKLLQKKLNKTEHK 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
F+S + + +
Sbjct: 236 FFISKESEHFNNIASKWL 253
>gi|283458299|ref|YP_003362918.1| glutamate racemase [Rothia mucilaginosa DY-18]
gi|283134333|dbj|BAI65098.1| glutamate racemase [Rothia mucilaginosa DY-18]
Length = 350
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 12/269 (4%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 21 APVGPTAAAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANAL 80
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSG 121
+ +++D + VIACNTA + + R + + + + PA ++A A T++
Sbjct: 81 RIMDELVDSG-VKMLVIACNTASAAVLRDARERYTRQYGIPVIEVIQPAARRALAATRNR 139
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT+ + + +H V+ VE+ E+ +
Sbjct: 140 KIGVIATEATVTSRAYEDTF-AITPNLEVHSVACPRFVEFVEKGITSGP----ELLETAR 194
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ V + V + ++D A+ L
Sbjct: 195 EYLQPLKDAGVDTLVLGCTHYPLLAGVISYIMGEDVTLVSSADETAKDVYRELLNHAIES 254
Query: 242 --TRVFDDHALFLSGKPDIAMRRLMQGFG 268
H +G+ + + + G
Sbjct: 255 PVPEENPHHEFLATGETETFSQLARRFLG 283
>gi|1709184|sp|P52972|MURI_BACSH RecName: Full=Glutamate racemase
gi|849141|gb|AAA68029.1| glutamate racemase [Lysinibacillus sphaericus]
Length = 265
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG ++ +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIIKRLPNETIYYIGDTARCPYGPRTRQEVRNFTWQ-MAKA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPA 130
L+K + VIACNTA + + L+ P LG + + A T+ + +L+T
Sbjct: 60 LEKMNIKMLVIACNTATAVALESLQRNMP-FPVLGVINRGARAAVKKTKRHEVVVLATEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S + HI ++ VE + + I + +
Sbjct: 119 TIKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKGQFANN----LIAEGLKPLKNE 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA 249
+ D ++L CTHYP++ + V L +++ A+ +L T T H
Sbjct: 175 QFDTVILGCTHYPILQKQIEAVVGEDVFVLSSAEETAKDVEEMLAYNGTLADTNAKPAHK 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ +G I
Sbjct: 235 FYATGSVPIFRSIAENWL 252
>gi|183597279|ref|ZP_02958772.1| hypothetical protein PROSTU_00524 [Providencia stuartii ATCC 25827]
gi|188023294|gb|EDU61334.1| hypothetical protein PROSTU_00524 [Providencia stuartii ATCC 25827]
Length = 288
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 81/261 (31%), Positives = 135/261 (51%), Gaps = 5/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL+FDSG+GGL V ++++ L+P H+IY D+ FPYG + + R+ L I
Sbjct: 24 IRPTILVFDSGVGGLSVYREVKKLLPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQLVDVI 83
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
K+ +++IACNTA T+ LR+ F +G VPAIK A T++G++ +L+T T
Sbjct: 84 AKKHPLTIAIIACNTASTVSLPNLRAHFR-FPVVGVVPAIKPATKLTRNGVVGLLATKGT 142
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + + C + + S L E G +I DEI ++ E
Sbjct: 143 VNREYTKELIERFATDCKVLSLGSADLVQLAERKLHGEQIPLDEIANAVKPWLRMPEP-- 200
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFDDHA 249
D ++L CTH+PL++ Q+ P ++D+ +IARRA L+ ++ D
Sbjct: 201 PDTVILGCTHFPLLIEELEQVLPDGTRFIDSGAAIARRAVWLINNQAEEVIDSQEKDFAY 260
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
L +A++ ++ G
Sbjct: 261 CLLMNDAALALQPVLAAEGFN 281
>gi|227890834|ref|ZP_04008639.1| glutamate racemase [Lactobacillus salivarius ATCC 11741]
gi|227867243|gb|EEJ74664.1| glutamate racemase [Lactobacillus salivarius ATCC 11741]
Length = 256
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 7/260 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K
Sbjct: 1 MTNKKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEK 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++
Sbjct: 61 VEHLLS-YNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMA 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TL+ ++L++ YV++ I + + L +E + E++ ++
Sbjct: 120 TPLTLKEKKFNDLMNKYVTKADIRKIPAPDLVEFIESG----DVDSPELETYLQKLLSPY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D IVL CTH+P V +++ +D + AR + LL + N +
Sbjct: 176 KDS--DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKG 233
Query: 248 HALFLSGKPDIAMRRLMQGF 267
F + + L Q
Sbjct: 234 SVKFENSRNTKGELELSQKL 253
>gi|262380044|ref|ZP_06073199.1| glutamate racemase [Acinetobacter radioresistens SH164]
gi|262298238|gb|EEY86152.1| glutamate racemase [Acinetobacter radioresistens SH164]
Length = 289
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGGL V Q++ +P +Y AD PYG D +++ + L
Sbjct: 20 DAPIGIFDSGIGGLSVAQEIARHLPHEQILYYADTAHVPYGPRSDQNIRELTAQAI-EWL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ +V+ACNTA D LR + S +G VPA+K A +++ ++++L+TPAT
Sbjct: 79 YRQGCKAAVVACNTASAFSLDYLRKHYGESFPIIGLVPALKPAVLQSKTKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R ++I + + + ++ + L VE+ + + +KK ++
Sbjct: 139 FRGNLIKDVIERFAMPTGVKVLPITCLELVPLVEQGLQMSQQCLNTLKKILQ----PVVE 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYP + + + + +D+ ++AR+ +L + + +
Sbjct: 195 QGADHLVLGCTHYPFLKPAIQAIFGQQLTLVDSGQAVARQTARILIKNELLGEQTCESET 254
Query: 249 --ALFLSGKPDIAMRRLMQGF 267
++SG ++ ++Q
Sbjct: 255 RIQCYVSGHNAENLKPILQHL 275
>gi|329770518|ref|ZP_08261896.1| glutamate racemase [Gemella sanguinis M325]
gi|328836267|gb|EGF85936.1| glutamate racemase [Gemella sanguinis M325]
Length = 264
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 9/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N+I +FDSG+GGL V +++ +P Y D PYG+ + + +
Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKKKDEIIINTEKAIKYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+++ + ++ACNTA + L+ + + +G V P ++A T++ + +L T
Sbjct: 61 INQG-VKMIILACNTATAAALEYLQEKY-DLPIIGVVQPGARRAIQATENNKVLVLGTKF 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKEIEGCFIEKEG 189
T I + S ++ + +E E + +D IK+ +
Sbjct: 119 TTTSEVYDIEIQNINSDIVVYDKACPSFVPFIESEGYLNKEEADDIIKETLNDT----ID 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DH 248
D +VL CTHYP++ + + + + AR +L HQ++V +H
Sbjct: 175 LGMDTVVLGCTHYPMLKKNIEEFYGNQIKVISSGREAAREVSTVLGYSKLHQSKVNKTEH 234
Query: 249 ALFLSGKPDIAMRRLMQGF 267
F+S K + +
Sbjct: 235 KFFISAKSENFDNIASKWL 253
>gi|262037470|ref|ZP_06010930.1| glutamate racemase [Leptotrichia goodfellowii F0264]
gi|261748505|gb|EEY35884.1| glutamate racemase [Leptotrichia goodfellowii F0264]
Length = 261
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 11/251 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI IFDSG+GGL VL+++R ++P Y+ D PYG + + + +L++
Sbjct: 2 SIGIFDSGVGGLTVLKEIRKVLPNEKIYYLGDTARVPYGEKTKELIVRYSKQITEFLLEQ 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133
V+ACNTA +L +EL+ TF + +G V A +K A T++ I ++ T AT+
Sbjct: 62 -NVDAIVVACNTATSLALEELKETFR-VPIIGVVDAGVKTALYTTKNNKIGVIGTKATIN 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + S ++ S + +EE +I + +K ++ ++ D
Sbjct: 120 SRKYETEIKNKNSAIEVYSKSCPLFVPVIEEGITKGEIVDLVVKMYLDEF-----KEKID 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHALF 251
++L CTHYPL+ + L P ++ +D + A + +L N + + +
Sbjct: 175 SLILGCTHYPLLKETIKNLYP-NIEIVDPAKETAEDLKKILTDNNLMKNDGEKGKEVRYY 233
Query: 252 LSGKPDIAMRR 262
++ +
Sbjct: 234 VTDGQEKFKEI 244
>gi|172041148|ref|YP_001800862.1| glutamate racemase [Corynebacterium urealyticum DSM 7109]
gi|171852452|emb|CAQ05428.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 288
Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 105/259 (40%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + L+P IY+ D PYG+ +++ + +++
Sbjct: 22 NAPIGIFDSGVGGLTVARTIVDLLPHESIIYIGDTANSPYGDKTIAQVREYARMVADELV 81
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + R +P +PA+++A + +++ I ++ T AT+
Sbjct: 82 ARG-VKMIVIACNTASAAFMRDARERYPIPVVEVILPAVRRAVSASRNNRIGLIGTQATV 140
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L + + VE + +I EG +
Sbjct: 141 TSGAYQDLFAA-SPDVTAVAQACPQFVPFVERGITSGR----QIHALAEGYLEPLKEAGV 195
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--- 249
D +VL CTHYPL+ V + + V +++++ A+ L + A
Sbjct: 196 DTVVLGCTHYPLLTGVVQFVMGEDVTLVNSAEETAKMVYRTLAESGQLADNDPERQATLS 255
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P + + G
Sbjct: 256 FESTGDPHRFAQLAQRFLG 274
>gi|163840216|ref|YP_001624621.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
gi|162953692|gb|ABY23207.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
Length = 306
Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 12/271 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++ +P + Q + IFDSG+GGL V + + +P YV D PYG ++
Sbjct: 1 MNQHPVVQ-AQAPLGIFDSGVGGLTVARSVIDQLPNESIFYVGDTANAPYGPLPIAEVRA 59
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYT 118
+ + +++D L VIACN+A + + R + + + + PA+++A A T
Sbjct: 60 NALGVMDELVDSG-VKLLVIACNSATAAVLPDARERYTLRHGIPVVEVIRPAVRRAVAAT 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++G I ++ T AT+ + + S + + VE E+
Sbjct: 119 RNGRIGVIGTEATIGSRAYEDSF-AVASDLQVTSAACPKFVEFVELGITAGP----ELLN 173
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
E + D +VL CTHYPL+ V + V + +++ A+ L +
Sbjct: 174 TAEEYLAPLKAAGVDTLVLGCTHYPLLTGVISYVMGDGVTLVSSAEETAKDVYKALIEHD 233
Query: 239 THQTR-VFDDHALFLSGKPDIAMRRLMQGFG 268
+T + H +G + + G
Sbjct: 234 LERTENLPPQHRFISTGDAEGFGTLARRFLG 264
>gi|300214554|gb|ADJ78970.1| Glutamate racemase [Lactobacillus salivarius CECT 5713]
Length = 256
Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 7/260 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K
Sbjct: 1 MTNKKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEK 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++
Sbjct: 61 VEHLLS-YNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMA 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TL+ ++L++ YV++ I + + L +E + E++ ++
Sbjct: 120 TPLTLKEKKFNDLMNKYVTKADIRKIPAPDLVEFIESG----DVDSPELETYLQKLLSPY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D IVL CTH+P V +++ +D + AR + LL + N +
Sbjct: 176 KDS--DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKG 233
Query: 248 HALFLSGKPDIAMRRLMQGF 267
F + + L Q
Sbjct: 234 SVKFENSRNTKEELELSQKL 253
>gi|220913060|ref|YP_002488369.1| glutamate racemase [Arthrobacter chlorophenolicus A6]
gi|219859938|gb|ACL40280.1| glutamate racemase [Arthrobacter chlorophenolicus A6]
Length = 360
Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 106/267 (39%), Gaps = 11/267 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG+GGL V + + +P +YV D PYG ++ +
Sbjct: 36 PAAALETRPIGVFDSGVGGLTVARSIIDQLPNESILYVGDTAHGPYGPLPIAEVRANALG 95
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGL 122
+ +++D L IACN+A + + R + + + + PA+++A A T+SG
Sbjct: 96 VMDELVDSG-VKLLTIACNSASAAVLRDARERYTAKYGIPVIEVIQPAVRRAVAATRSGR 154
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ ++ T AT+ + + HI V+ S VE E+ E
Sbjct: 155 VGVIGTSATVGSRAYEDTFAA-APDLHITSVACPEFVSYVEAGIT----TGPELLAVAEE 209
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYPL+ V + V + +++ A+ L N +T
Sbjct: 210 YLAPLKASGVDTVVLGCTHYPLLTGVISYVMGADVTLVSSAEETAKDVYRALATNNLQRT 269
Query: 243 -RVFDDHALFLSGKPDIAMRRLMQGFG 268
+H +G + G
Sbjct: 270 AATPPEHHFVATGDAAQFETLARRFLG 296
>gi|160873307|ref|YP_001552623.1| glutamate racemase [Shewanella baltica OS195]
gi|189030369|sp|A9KW83|MURI_SHEB9 RecName: Full=Glutamate racemase
gi|160858829|gb|ABX47363.1| glutamate racemase [Shewanella baltica OS195]
gi|315265534|gb|ADT92387.1| glutamate racemase [Shewanella baltica OS678]
Length = 274
Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 11/256 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L L E+ ++ + +
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N +
Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRR------ 229
Query: 252 LSGKPDIAMRRLMQGF 267
++ + + + +MQ F
Sbjct: 230 VTNEREALGQSVMQAF 245
>gi|15608478|ref|NP_215854.1| glutamate racemase [Mycobacterium tuberculosis H37Rv]
gi|15840793|ref|NP_335830.1| glutamate racemase [Mycobacterium tuberculosis CDC1551]
gi|31792534|ref|NP_855027.1| glutamate racemase [Mycobacterium bovis AF2122/97]
gi|148661127|ref|YP_001282650.1| glutamate racemase [Mycobacterium tuberculosis H37Ra]
gi|148822559|ref|YP_001287313.1| glutamate racemase [Mycobacterium tuberculosis F11]
gi|167969085|ref|ZP_02551362.1| glutamate racemase [Mycobacterium tuberculosis H37Ra]
gi|215403185|ref|ZP_03415366.1| glutamate racemase [Mycobacterium tuberculosis 02_1987]
gi|215410983|ref|ZP_03419791.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A]
gi|215426667|ref|ZP_03424586.1| glutamate racemase [Mycobacterium tuberculosis T92]
gi|215430224|ref|ZP_03428143.1| glutamate racemase [Mycobacterium tuberculosis EAS054]
gi|215445520|ref|ZP_03432272.1| glutamate racemase [Mycobacterium tuberculosis T85]
gi|218753049|ref|ZP_03531845.1| glutamate racemase [Mycobacterium tuberculosis GM 1503]
gi|219557241|ref|ZP_03536317.1| glutamate racemase [Mycobacterium tuberculosis T17]
gi|253799614|ref|YP_003032615.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 1435]
gi|254364235|ref|ZP_04980281.1| glutamate racemase murI [Mycobacterium tuberculosis str. Haarlem]
gi|254550350|ref|ZP_05140797.1| glutamate racemase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260186277|ref|ZP_05763751.1| glutamate racemase [Mycobacterium tuberculosis CPHL_A]
gi|260200395|ref|ZP_05767886.1| glutamate racemase [Mycobacterium tuberculosis T46]
gi|260204599|ref|ZP_05772090.1| glutamate racemase [Mycobacterium tuberculosis K85]
gi|289442780|ref|ZP_06432524.1| glutamate racemase [Mycobacterium tuberculosis T46]
gi|289446933|ref|ZP_06436677.1| glutamate racemase MurI [Mycobacterium tuberculosis CPHL_A]
gi|289554870|ref|ZP_06444080.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 605]
gi|289569351|ref|ZP_06449578.1| glutamate racemase MurI [Mycobacterium tuberculosis T17]
gi|289574004|ref|ZP_06454231.1| glutamate racemase MurI [Mycobacterium tuberculosis K85]
gi|289745090|ref|ZP_06504468.1| glutamate racemase MurI [Mycobacterium tuberculosis 02_1987]
gi|289749894|ref|ZP_06509272.1| glutamate racemase MurI [Mycobacterium tuberculosis T92]
gi|289753420|ref|ZP_06512798.1| glutamate racemase MurI [Mycobacterium tuberculosis EAS054]
gi|289757443|ref|ZP_06516821.1| glutamate racemase [Mycobacterium tuberculosis T85]
gi|289761499|ref|ZP_06520877.1| glutamate racemase MurI [Mycobacterium tuberculosis GM 1503]
gi|294994896|ref|ZP_06800587.1| glutamate racemase [Mycobacterium tuberculosis 210]
gi|297633891|ref|ZP_06951671.1| glutamate racemase [Mycobacterium tuberculosis KZN 4207]
gi|297730879|ref|ZP_06959997.1| glutamate racemase [Mycobacterium tuberculosis KZN R506]
gi|298524845|ref|ZP_07012254.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A]
gi|306775517|ref|ZP_07413854.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu001]
gi|306780667|ref|ZP_07419004.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu002]
gi|306784068|ref|ZP_07422390.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu003]
gi|306788429|ref|ZP_07426751.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu004]
gi|306792758|ref|ZP_07431060.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu005]
gi|306797162|ref|ZP_07435464.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu006]
gi|306803041|ref|ZP_07439709.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu008]
gi|306807235|ref|ZP_07443903.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu007]
gi|306967432|ref|ZP_07480093.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu009]
gi|306971625|ref|ZP_07484286.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu010]
gi|307079337|ref|ZP_07488507.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu011]
gi|307083902|ref|ZP_07493015.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu012]
gi|313658212|ref|ZP_07815092.1| glutamate racemase [Mycobacterium tuberculosis KZN V2475]
gi|54037866|sp|P63636|MURI_MYCBO RecName: Full=Glutamate racemase
gi|54041259|sp|P63635|MURI_MYCTU RecName: Full=Glutamate racemase
gi|166231043|sp|A5U238|MURI_MYCTA RecName: Full=Glutamate racemase
gi|1340104|emb|CAA98102.1| PROBABLE GLUTAMATE RACEMASE MURI [Mycobacterium tuberculosis H37Rv]
gi|13880988|gb|AAK45644.1| glutamate racemase [Mycobacterium tuberculosis CDC1551]
gi|31618123|emb|CAD94234.1| PROBABLE GLUTAMATE RACEMASE MURI [Mycobacterium bovis AF2122/97]
gi|134149749|gb|EBA41794.1| glutamate racemase murI [Mycobacterium tuberculosis str. Haarlem]
gi|148505279|gb|ABQ73088.1| glutamate racemase [Mycobacterium tuberculosis H37Ra]
gi|148721086|gb|ABR05711.1| glutamate racemase murI [Mycobacterium tuberculosis F11]
gi|253321117|gb|ACT25720.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 1435]
gi|289415699|gb|EFD12939.1| glutamate racemase [Mycobacterium tuberculosis T46]
gi|289419891|gb|EFD17092.1| glutamate racemase MurI [Mycobacterium tuberculosis CPHL_A]
gi|289439502|gb|EFD21995.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 605]
gi|289538435|gb|EFD43013.1| glutamate racemase MurI [Mycobacterium tuberculosis K85]
gi|289543105|gb|EFD46753.1| glutamate racemase MurI [Mycobacterium tuberculosis T17]
gi|289685618|gb|EFD53106.1| glutamate racemase MurI [Mycobacterium tuberculosis 02_1987]
gi|289690481|gb|EFD57910.1| glutamate racemase MurI [Mycobacterium tuberculosis T92]
gi|289694007|gb|EFD61436.1| glutamate racemase MurI [Mycobacterium tuberculosis EAS054]
gi|289709005|gb|EFD73021.1| glutamate racemase MurI [Mycobacterium tuberculosis GM 1503]
gi|289713007|gb|EFD77019.1| glutamate racemase [Mycobacterium tuberculosis T85]
gi|298494639|gb|EFI29933.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A]
gi|308215989|gb|EFO75388.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu001]
gi|308326496|gb|EFP15347.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu002]
gi|308331137|gb|EFP19988.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu003]
gi|308334978|gb|EFP23829.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu004]
gi|308338784|gb|EFP27635.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu005]
gi|308342425|gb|EFP31276.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu006]
gi|308346336|gb|EFP35187.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu007]
gi|308350259|gb|EFP39110.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu008]
gi|308354908|gb|EFP43759.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu009]
gi|308358852|gb|EFP47703.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu010]
gi|308362789|gb|EFP51640.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu011]
gi|308366436|gb|EFP55287.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu012]
gi|323720155|gb|EGB29258.1| glutamate racemase murI [Mycobacterium tuberculosis CDC1551A]
gi|326902961|gb|EGE49894.1| glutamate racemase murI [Mycobacterium tuberculosis W-148]
gi|328459360|gb|AEB04783.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 4207]
Length = 271
Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++
Sbjct: 6 APVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVG 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACN+A + + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKAL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATIT 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I V+ VE + ++ +G + D
Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAQGYLEPLQRAEVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251
+VL CTHYPL+ + + V + +++ A+ +L I+ +
Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFE 239
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ + + G
Sbjct: 240 ATGDPEAFTKLAARFLG 256
>gi|213609517|ref|ZP_03369343.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
Length = 233
Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 127/235 (54%), Gaps = 3/235 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
L CTH+PL+ Q+ P +D+ +IARR LL + A
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYC 233
>gi|94987309|ref|YP_595242.1| glutamate racemase [Lawsonia intracellularis PHE/MN1-00]
gi|94731558|emb|CAJ54921.1| Glutamate racemase [Lawsonia intracellularis PHE/MN1-00]
Length = 286
Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 5/256 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I +FDSG+GGL VLQ ++ LMP +++Y+ D PYG + + S
Sbjct: 2 NKSSPIGLFDSGVGGLTVLQALQNLMPNENYLYLGDTARLPYGTKSPKTVLHYAIQSAST 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
++++ Q L +IACNTA L+ TFP + +G + P+ + A + G +++++T
Sbjct: 62 LIER-QIKLLIIACNTATAAALPLLQETFPFIPIIGVIEPSAQIACKTSLKGHVAVIATE 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+T++ I Y + + + + VEE I E I + F +
Sbjct: 121 STIQGKCYEETILRYRPEILVESKACPLFVPIVEEGWFSGPIVESIIIHYLSSLFFNRSI 180
Query: 190 KR-TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFD 246
K D +VL CTHYPL+ +++ + +D++ + A+ + + + N T +
Sbjct: 181 KDQPDCLVLGCTHYPLLSETIQKIIGNDITIVDSTVATAKLVQACIIQHNMVNPNTNLIG 240
Query: 247 DHALFLSGKPDIAMRR 262
+ R
Sbjct: 241 STIFLTTDDKVRFARI 256
>gi|227833923|ref|YP_002835630.1| Glutamate racemase [Corynebacterium aurimucosum ATCC 700975]
gi|262184926|ref|ZP_06044347.1| glutamate racemase [Corynebacterium aurimucosum ATCC 700975]
gi|227454939|gb|ACP33692.1| Glutamate racemase [Corynebacterium aurimucosum ATCC 700975]
Length = 258
Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 7/261 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + +P+ IY+ D PYG +++ +
Sbjct: 1 MPDATSPIGIFDSGVGGLTVARTIIEQLPDESIIYIGDTAHAPYGPRPIAQVRELSTAIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+++++ + VIACNTA + R + PA+++A A T++G I ++ T
Sbjct: 61 DELVERG-CKMLVIACNTATAAFLHDARERYDIPVVEVIRPAVRRAIATTRNGKIGVIGT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ +L + V+ + VE + +I EG +
Sbjct: 120 EGTINSGAYQDLF-AVNPNVECEAVACPDFVNFVERGITAGR----QILGVAEGYLAPLQ 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDD 247
D +VL CTHYPL+ V + V + +++ + +L +
Sbjct: 175 SAGVDTLVLGCTHYPLLTGVIQLAIGDNVTLVSSAEETTKDVLRILTNTDLLAPAGQAPT 234
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
+ +G R + G
Sbjct: 235 RSFECTGDHAAFERLATRFLG 255
>gi|269103679|ref|ZP_06156376.1| glutamate racemase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163577|gb|EEZ42073.1| glutamate racemase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 273
Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 129/240 (53%), Gaps = 7/240 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
IFDSG+GGL V Q++R +P+ +IY D+ FPYG L +R + ++++ ++Q
Sbjct: 14 IFDSGVGGLSVYQEIRARLPQAQYIYAFDNAAFPYGELPQQVLIERACHIITNLVARHQA 73
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L V+ACNTA T++ LR ++ +G VPAIK AA + S I +L+TPAT+ R YT
Sbjct: 74 DLVVVACNTASTIVLPALRQQL-TIPVVGVVPAIKPAAQASLSKSIGLLATPATVERPYT 132
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+L+ + C + ++ + L EE G + +E+ + + + D IVL
Sbjct: 133 HDLVKQFAQDCQVLMLGTTRLVEMAEEKLQGEVVSLNELTQILAPWL-----GKVDTIVL 187
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKP 256
CTH+PL+ +Q+ V +D+ +IA R LLP T + + D+ + S KP
Sbjct: 188 GCTHFPLMRAEIQQVCGAGVTIIDSGKAIANRVVSLLPESATQDAALEEMDNLTYCSAKP 247
>gi|120405243|ref|YP_955072.1| glutamate racemase [Mycobacterium vanbaalenii PYR-1]
gi|119958061|gb|ABM15066.1| glutamate racemase [Mycobacterium vanbaalenii PYR-1]
Length = 281
Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 12/260 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P+ IY+ D PYG ++ + + D+ +
Sbjct: 11 PIGIFDSGVGGLTVARAVIDQLPDEDIIYIGDTGNGPYGPLTIPEIRAHALAIGDDLAGR 70
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
VIACN+A + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 71 G-IKALVIACNSASSACLRDARERYAPIPVVEVILPAVRRAVATTRNGRIGVIGTAATIA 129
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V+ VE + ++ EG + D
Sbjct: 130 SGAYQDTFAA-ARDIEVFGVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAEVD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-----H 248
+VL CTHYP++ + + + V + +++ A+ +L + + D
Sbjct: 185 TLVLGCTHYPMLSGLIQLVMGDHVTLVSSAEETAKDLLRVLTKRELLKPHPGDPAVRAHR 244
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 245 QFEATGDPEAFTALAARFLG 264
>gi|212712479|ref|ZP_03320607.1| hypothetical protein PROVALCAL_03574 [Providencia alcalifaciens DSM
30120]
gi|212684695|gb|EEB44223.1| hypothetical protein PROVALCAL_03574 [Providencia alcalifaciens DSM
30120]
Length = 258
Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats.
Identities = 82/255 (32%), Positives = 134/255 (52%), Gaps = 4/255 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V ++++ L+P H+IY D+ FPYG + + R+ + + I K+
Sbjct: 1 MFDSGVGGLSVYREVKKLIPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQIVNAIAKKHPL 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++VIACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+ R YT
Sbjct: 61 TIAVIACNTASTVSLPNLRAHF-TFPIVGVVPAIKPATKLTRNGVVGLLATKGTVNREYT 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + + C + + S L E G + DEI + ++ KE D ++L
Sbjct: 120 KELIERFATDCKVISLGSAELVQLAERKLHGEMLPLDEIAQAVKPWLKMKEA--PDTVIL 177
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTH+PLIV ++ P ++D+ +IARR L+ +D A L
Sbjct: 178 GCTHFPLIVEELEKVLPNGTRFIDSGAAIARRTVWLINNQAEVTDSNEEDFAYCLLMNES 237
Query: 258 IA-MRRLMQGFGLKS 271
+ +R +++ G KS
Sbjct: 238 LQELRPVLEAEGFKS 252
>gi|209524014|ref|ZP_03272566.1| glutamate racemase [Arthrospira maxima CS-328]
gi|209495686|gb|EDZ95989.1| glutamate racemase [Arthrospira maxima CS-328]
Length = 284
Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ +P +Y AD PYG + + + + + +
Sbjct: 8 QKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITWAVA 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + ++ACNT+ L + +RS F + LG + +AA +Q I +++TPAT
Sbjct: 68 Q-DVKMVLMACNTSSALALEVVRSEF-DIPILGLILPGSRAA-ISQGERIGVIATPATAA 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + V +E+ +I + + +R D
Sbjct: 125 SNAYRQAIQEINPAVQVWQVGCPAFVPLIEQN----RIHDPCTLEVAREYLAPLIQQRID 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++ CTHYP + V R L P V +D + + L + + + +S
Sbjct: 181 TLIYGCTHYPHLAPVLRSLLPASVKLVDPAVHLVEAVVQELELLGLRHSDLPRPTRFCVS 240
Query: 254 GKPDIAMRRLMQGFGL 269
G + +Q G
Sbjct: 241 GCAEQFANLSVQWLGY 256
>gi|304413419|ref|ZP_07394892.1| glutamate racemase [Candidatus Regiella insecticola LSR1]
gi|304284262|gb|EFL92655.1| glutamate racemase [Candidatus Regiella insecticola LSR1]
Length = 292
Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 138/272 (50%), Gaps = 4/272 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
++ N +++ + ++LIFDSG+GGL + Q++R L+P H+IY D+ FPYG + +
Sbjct: 17 LQARNAKVDQRFRPTVLIFDSGVGGLSIYQEIRQLLPNIHYIYAFDNQAFPYGEKTEAFI 76
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++ L VIACNTA T+ LR F +G VPAIK A T++
Sbjct: 77 VERVLKIVTRVQQQHPLTLVVIACNTASTVSLPTLRKYF-FFPIVGVVPAIKPAVQLTRN 135
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L+T AT+ TY +LI + + C I + S L + E+ G + + ++K +
Sbjct: 136 KRIGLLATRATIHCTYIQDLIECFAADCQIERLWSSELVTLAEKKLHGGSVSVEALRKIL 195
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
D +VL CTH+PL+ ++ P+ +D+ +IA R LL
Sbjct: 196 TPWL--NMDSPPDTVVLGCTHFPLLAEELAKILPYNTQMVDSGAAIAHRVVWLLSLQQKA 253
Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + A + A + ++Q +G +
Sbjct: 254 VSTTARNIAYCTQKNANTALLLPVLQQYGFST 285
>gi|255326294|ref|ZP_05367380.1| glutamate racemase [Rothia mucilaginosa ATCC 25296]
gi|255296748|gb|EET76079.1| glutamate racemase [Rothia mucilaginosa ATCC 25296]
Length = 350
Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 12/269 (4%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 21 APVGPTAAAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANAL 80
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSG 121
+ +++D + VIACNTA + + R + + + + PA ++A A T++
Sbjct: 81 RIMDELVDSG-VKMLVIACNTASAAVLRDARERYTRQYGIPVIEVIQPAARRALAATRNR 139
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT+ + + +H V+ VE+ E+ +
Sbjct: 140 KIGVIATEATVTSRAYEDTF-AITPNLEVHSVACPRFVEFVEKGITSGP----ELLETAR 194
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ V + V + ++D A+ L
Sbjct: 195 EYLQPLKDAGVDTLVLGCTHYPLLAGVISYIMGEDVTLVSSADETAKDVYRELLNHAIES 254
Query: 242 --TRVFDDHALFLSGKPDIAMRRLMQGFG 268
H +G+ + + + G
Sbjct: 255 PVPAENPHHEFLATGESETFSQLARRFLG 283
>gi|30019021|ref|NP_830652.1| glutamate racemase [Bacillus cereus ATCC 14579]
gi|229126278|ref|ZP_04255296.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
gi|29894563|gb|AAP07853.1| Glutamate racemase [Bacillus cereus ATCC 14579]
gi|228657270|gb|EEL13090.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
Length = 276
Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA EL+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IKSNMYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVLSFEHIAERWLGYQ 259
>gi|91774979|ref|YP_544735.1| glutamate racemase [Methylobacillus flagellatus KT]
gi|91708966|gb|ABE48894.1| glutamate racemase [Methylobacillus flagellatus KT]
Length = 270
Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats.
Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 7/253 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I +FDSG+GGL VL+ ++ +P H +YVAD + PYG + +R + +
Sbjct: 9 MTPAIGVFDSGVGGLSVLRHIQQQLPHEHLLYVADSLNAPYGPKPQAFIIERSRNIAQFL 68
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA LR+ + +G PA+K AAA T+SG++ +L+T T
Sbjct: 69 IESGA-KAIVVACNTATAAAIRILRNEL-DIPVIGMEPAVKPAAAATRSGVVGVLATTGT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L+ + L+ Y + + + L +E ++ + + G +
Sbjct: 127 LKSAQFAALLEHYGKHIKVVAQACVGLVECIERG----ELDTPSTRALVAGYVAPLMEEG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D IVL CTHYP I + ++ V +D ++AR+ L +R
Sbjct: 183 ADTIVLGCTHYPFIKPLIADIAGPDVVLIDTGAAVARQVGHRLEEAGLLTASRAPGSVKA 242
Query: 251 FLSGKPDIAMRRL 263
+ + A + +
Sbjct: 243 WTNSAAGNAQQLI 255
>gi|255692422|ref|ZP_05416097.1| glutamate racemase [Bacteroides finegoldii DSM 17565]
gi|260621890|gb|EEX44761.1| glutamate racemase [Bacteroides finegoldii DSM 17565]
Length = 280
Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + S + D
Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVSKLFD 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L + P+ LG + P ++ TQ+ I IL+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPNIDPARRVLGVIRPTVECIGNITQNQHIGILA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + V+ + S VE + + I+K I+
Sbjct: 129 TAGTVKSESYPLEIHKLFPDIRVSGVACPMWVSLVENNESQNEGTDYFIRKYIDQLLT-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D ++L CTH+P+++ RQ P + + + +A+ + L R +
Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPEHISVISQGEYVAQSLKDYLRRHPEMDAKCTKN 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + + +
Sbjct: 247 GNCSFYTTEAEEKFTE 262
>gi|113968524|ref|YP_732317.1| glutamate racemase [Shewanella sp. MR-4]
gi|122944227|sp|Q0HNV7|MURI_SHESM RecName: Full=Glutamate racemase
gi|113883208|gb|ABI37260.1| glutamate racemase [Shewanella sp. MR-4]
Length = 272
Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats.
Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 11/266 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P + + Y+ D+ PYG E+ L + L +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHDYCYLFDNARLPYGELEEQELVSGCVALIDQV 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L S L E+ ++ +
Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQKIATGQLD----MARLTQVLSPIVTAD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ------TRVF 245
DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q R
Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGKGVTLLDSGEAIAKRVKTLLAETKSEQQVQEDANRDS 235
Query: 246 DDHALFLSGKPDIAMRRLMQGFGLKS 271
A + K + ++ G +
Sbjct: 236 VMQAFYTKAKISEGLVSMLVDCGFST 261
>gi|297625966|ref|YP_003687729.1| glutamate racemase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921731|emb|CBL56289.1| Glutamate racemase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 272
Score = 287 bits (737), Expect = 7e-76, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 99/253 (39%), Gaps = 8/253 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + I IFDSG GGL V + + L+P IY+ D PYG +++ ++
Sbjct: 1 MNRDVNAPIGIFDSGFGGLTVARAVVDLLPREDIIYLGDTARAPYGPRPIAEVREFVLQA 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++ + L VIACNT + + R + +PA ++AA T++G + ++
Sbjct: 61 LDSLVARGVKSL-VIACNTGSSAALHDARERYDLPITEVVLPAARKAARITRNGRVGVIC 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T ++ + S + VE E+ +
Sbjct: 120 TRGTAISRSYNDALA--ASPVKLFTQVCPRFVEFVEAGIT----TGPEVLQLAREYLAPL 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
+ D ++L CTHYPL+ V + V + +SD AR L R + +T
Sbjct: 174 QADDIDTLILGCTHYPLLSGVISYVMGEDVTLVSSSDECARAVFAELTRDDLLRTEPHEP 233
Query: 247 DHALFLSGKPDIA 259
F +G P
Sbjct: 234 QREFFTTGDPAQF 246
>gi|327439324|dbj|BAK15689.1| glutamate racemase [Solibacillus silvestris StLB046]
Length = 266
Score = 287 bits (737), Expect = 7e-76, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V + + L+P Y+ D PYG ++ +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKAIMELLPNETIYYIGDTARCPYGPRTKQEVRNFTWE-MAKA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130
L+K + VIACNTA + + L+ P LG + A + A T+ + +L+T
Sbjct: 60 LEKMNVKMLVIACNTATAVALESLQKHMP-FPVLGVINAGARAAIKKTKRNEVVVLATEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ I ++ VE + D + K ++ E +
Sbjct: 119 TIKSGAYEEAVKSLSTKAKIIPLACPTFVPLVESGEYEGQFSYDLVAKGLK----PLEDE 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
R D ++L CTHYP++ V L +++ A+ +L +T H
Sbjct: 175 RFDTVILGCTHYPILQKQIEAAVGSQVHVLSSAEETAKDVEAILSYTGQLRTDEEPPKHI 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
L SG I +
Sbjct: 235 LHASGSVPIFRSIAERWL 252
>gi|282901288|ref|ZP_06309214.1| Glutamate racemase [Cylindrospermopsis raciborskii CS-505]
gi|281193783|gb|EFA68754.1| Glutamate racemase [Cylindrospermopsis raciborskii CS-505]
Length = 285
Score = 287 bits (737), Expect = 7e-76, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 9/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL VL+++ +P IY D PYG + + + + + +
Sbjct: 23 SPIGVFDSGVGGLTVLRQVYQQLPNESVIYFGDTAHLPYGIRSQKEILGYVREILNWM-E 81
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ + ++ACNT+ L + +R + LG + PA K A I +++TPAT
Sbjct: 82 QQGVKMVIMACNTSSALTLETVRLEYK-FPILGMISPATKFAVNV--GKRIGVIATPATA 138
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + VS +E+ ++ + + +
Sbjct: 139 KSNAYRQAIMELKVNVQVWQVSCPEFVPLIEQN----RLHDPYTLAVAKSYLEPLLAQEI 194
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++ CTHYPL+ + + L P + +D + + R + L +N + +
Sbjct: 195 DTLIYGCTHYPLLEPIIKTLIPNHIHLVDPAVHVVRVCQRELEILNIKNRLLPMPTRFVV 254
Query: 253 SGKPDIAMRRLMQGFGL 269
SG P + G
Sbjct: 255 SGSPQQFSQSGTPWLGY 271
>gi|269214987|ref|ZP_05987513.2| glutamate racemase [Neisseria lactamica ATCC 23970]
gi|269208607|gb|EEZ75062.1| glutamate racemase [Neisseria lactamica ATCC 23970]
Length = 326
Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 122
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 123 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 182 VNSNAYARAIHRSNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 237
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 238 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 296
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 297 YVSDIPLKFRTIGERFLG 314
>gi|108800810|ref|YP_641007.1| glutamate racemase [Mycobacterium sp. MCS]
gi|119869950|ref|YP_939902.1| glutamate racemase [Mycobacterium sp. KMS]
gi|108771229|gb|ABG09951.1| Glutamate racemase [Mycobacterium sp. MCS]
gi|119696039|gb|ABL93112.1| glutamate racemase [Mycobacterium sp. KMS]
Length = 280
Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 13/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++++
Sbjct: 11 PVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDDLVER 70
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 71 GVKAL-VIACNTASSACLRDARERYAPVPVVEVILPAVRRAVATTRNGRIGVIGTAATIA 129
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V+ VE + ++ EG + D
Sbjct: 130 SGAYQDAFAA-ARDIEVIGVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRADVD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---- 249
+VL CTHYP++ + + V + +++ A+ +L ++ + D A
Sbjct: 185 TLVLGCTHYPMLSGLIQLAMGDQVTLVSSAEETAKDLLRVLTELDLLRPHPADPGATPAT 244
Query: 250 --LFLSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 245 RVFESTGDPEAFATLATRFLG 265
>gi|224025256|ref|ZP_03643622.1| hypothetical protein BACCOPRO_01993 [Bacteroides coprophilus DSM
18228]
gi|224018492|gb|EEF76490.1| hypothetical protein BACCOPRO_01993 [Bacteroides coprophilus DSM
18228]
Length = 280
Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats.
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 10/262 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG GGL +L K+R LMP +IY+ D+ PYG + + + +
Sbjct: 9 SGPVGVFDSGYGGLTILAKIRELMPHNDYIYLGDNARTPYGTRSFEVVYEFTLQAVRKLF 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ P L ++ACNTA ++ P+ LG + P ++ A T + + +L
Sbjct: 69 ELGCP-LVILACNTASAKALRSIQQNDLPYLDPTRRVLGVIRPTVESIGALTATRHVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+TP T+ IH + + + VE + + ++K I+G
Sbjct: 128 ATPGTILSESYPLEIHKLFPDVQVTGMPCPMWVPLVENNEFASEGADYFVRKYIDGLLS- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VF 245
+ D ++L CTHYPL++ R+ +P + + + +AR + L R +R
Sbjct: 187 -QDPEIDTLILGCTHYPLLLDKIRRFTPSHIRLVAQGEYVARSLKDYLSRHTEMNSRCTC 245
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
+ H FL+ + R F
Sbjct: 246 NGHCEFLTTESVSKFRESASVF 267
>gi|15676369|ref|NP_273505.1| glutamate racemase [Neisseria meningitidis MC58]
gi|218768777|ref|YP_002343289.1| glutamate racemase [Neisseria meningitidis Z2491]
gi|60392794|sp|P0A0Q9|MURI_NEIMA RecName: Full=Glutamate racemase
gi|60392795|sp|P0A0R0|MURI_NEIMB RecName: Full=Glutamate racemase
gi|6274531|gb|AAF06679.1|AF163663_4 putative glutamate racemase MurI [Neisseria meningitidis]
gi|7225684|gb|AAF40895.1| glutamate racemase [Neisseria meningitidis MC58]
gi|121052785|emb|CAM09131.1| glutamate racemase [Neisseria meningitidis Z2491]
gi|254672785|emb|CBA06865.1| Glutamate racemase [Neisseria meningitidis alpha275]
gi|316985801|gb|EFV64744.1| glutamate racemase [Neisseria meningitidis H44/76]
gi|319411017|emb|CBY91415.1| glutamate racemase [Neisseria meningitidis WUE 2594]
gi|325136845|gb|EGC59443.1| glutamate racemase [Neisseria meningitidis M0579]
gi|325140970|gb|EGC63477.1| glutamate racemase [Neisseria meningitidis CU385]
gi|325199643|gb|ADY95098.1| glutamate racemase [Neisseria meningitidis H44/76]
Length = 270
Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|253997247|ref|YP_003049311.1| glutamate racemase [Methylotenera mobilis JLW8]
gi|253983926|gb|ACT48784.1| glutamate racemase [Methylotenera mobilis JLW8]
Length = 270
Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GG+ VLQ + L+P +YVAD PYGN ++ R + ++
Sbjct: 12 QRPIAVFDSGVGGISVLQHIHTLLPNEQLLYVADSKYAPYGNKSPAEIQARCTEITDFLI 71
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA D +R + ++ +G PA+K AA +++G+I +L+T TL
Sbjct: 72 ANHA-KAIVVACNTATAAAIDMMREKY-TLPIIGMEPAVKPAATASRNGIIGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ SY + + + L VE +++ D + ++ +
Sbjct: 130 KSAQFAGLLESYGRNVKVVTQACVGLVECVERG----ELQADATLQLVQKYCQPLLDEGA 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
D IVL CTHYP + + Q+ V +D ++A++ + L ++ + +
Sbjct: 186 DTIVLGCTHYPFVRPLIEQVVGAQVSLIDTGAAVAKQLQKRLSALDLLTNNQQRGRVQFW 245
Query: 252 LSGKPDIAMRRLMQGF 267
+ + A + + +
Sbjct: 246 TNSAAENAKQVVENLW 261
>gi|325266613|ref|ZP_08133290.1| glutamate racemase [Kingella denitrificans ATCC 33394]
gi|324982056|gb|EGC17691.1| glutamate racemase [Kingella denitrificans ATCC 33394]
Length = 287
Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats.
Identities = 64/270 (23%), Positives = 121/270 (44%), Gaps = 8/270 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+ ID I +FDSG+GGL V++ + +P + +Y D PYG + +
Sbjct: 12 LSIDIRTMNANNSKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTI 71
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQ 119
+ + + +L + Q VIACNT + +++ +M L + A QAA A T+
Sbjct: 72 EDFSLQIVDFLL-QNQVKALVIACNTIAAVAGAKVQQMAGNMPVLSVIEAGAQAALATTR 130
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I +++T T+ + IH++ I ++ +L VEE ++ +++
Sbjct: 131 NNHIGVIATNTTVNSNAYARAIHAHNPDTRILSQAAPLLVPLVEEGWLDHEVTRLTVREY 190
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
++ +K D ++L CTHYPL+ + RQ +P ++ +D+S + A L
Sbjct: 191 LKPLLADK----IDTLILGCTHYPLLKPLIRQEAP-HIELVDSSTTTAEATAQALAAAQL 245
Query: 240 HQTRV-FDDHALFLSGKPDIAMRRLMQGFG 268
T+ D+ ++S P + G
Sbjct: 246 LNTQPCTPDYRFYVSDIPLRFQTIGERFLG 275
>gi|309782392|ref|ZP_07677116.1| glutamate racemase [Ralstonia sp. 5_7_47FAA]
gi|308918729|gb|EFP64402.1| glutamate racemase [Ralstonia sp. 5_7_47FAA]
Length = 282
Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 6/248 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 1 MTTRAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAERTLRV 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+
Sbjct: 61 CEWLVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T +TLR + L+ C + L +E + + +
Sbjct: 119 TESTLRSEKFARLLAGASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLRAYLQPM 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTHYP + +++ + +D ++AR L +
Sbjct: 175 LDANADTLVLGCTHYPFLEDAIHEIAGDRLTLIDTGHAVARHLGRTLAAAGLQASGQAAT 234
Query: 248 HALFLSGK 255
+G
Sbjct: 235 PCFMSTGD 242
>gi|317494788|ref|ZP_07953200.1| glutamate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917390|gb|EFV38737.1| glutamate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 286
Score = 287 bits (737), Expect = 8e-76, Method: Composition-based stats.
Identities = 84/255 (32%), Positives = 138/255 (54%), Gaps = 5/255 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG ++ + +R++ +++ ++
Sbjct: 29 LVFDSGVGGLSVYQEIRSLLPDLHYIYAFDNQGFPYGEKDEAFIIERVVKTVAEVQKRHP 88
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ +IACNTA T+ LR F S +G VPAIK AA T++G++ +L+T AT++R+Y
Sbjct: 89 LSIVIIACNTASTITLPALRERF-SFPIVGVVPAIKPAAKLTRNGVVGLLATKATVQRSY 147
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T +LI + + C I ++ S L E G I +KK + E D +V
Sbjct: 148 THDLIARFATDCDIKMLGSSELVVLAEAKLHGEVIDHAVLKKILRPWLSMAEP--PDTVV 205
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALFLSGK 255
L CTH+PL+ + P +D+ +IARR L+ + NT T +A +
Sbjct: 206 LGCTHFPLLREELAAVLPDGTRLVDSGAAIARRVAWLIANQENTLSTEDDVAYATKTNSD 265
Query: 256 PDIAMRRLMQGFGLK 270
+ A+ ++ G
Sbjct: 266 TE-ALLPVLHRMGFS 279
>gi|291571969|dbj|BAI94241.1| glutamate racemase [Arthrospira platensis NIES-39]
Length = 285
Score = 287 bits (737), Expect = 9e-76, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 9/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ +P +Y AD PYG + + + + + +
Sbjct: 8 QKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITWAVA 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ + ++ACNT+ L + +RS F + LG + P + A +Q I +++TPAT
Sbjct: 68 Q-DVKMVLMACNTSSALALEVVRSEF-DIPILGLILPGARAAI--SQGERIGVIATPATA 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + V +E+ +I + + +R
Sbjct: 124 ASNAYRQAIQEINPAVQVWQVGCPAFVPLIEQN----RIHDPCTLEAAREYLTPLIQQRI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++ CTHYP + V R L P V +D + + L + + +
Sbjct: 180 DTLIYGCTHYPHLAPVLRSLLPAAVKLVDPAVHLVEAVAQELELLGLRHGDLPRPTRFCV 239
Query: 253 SGKPDIAMRRLMQGFGL 269
SG + +Q G
Sbjct: 240 SGCAEQFANLSVQWLGY 256
>gi|78187589|ref|YP_375632.1| glutamate racemase [Chlorobium luteolum DSM 273]
gi|78167491|gb|ABB24589.1| glutamate racemase [Chlorobium luteolum DSM 273]
Length = 271
Score = 287 bits (737), Expect = 9e-76, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 7/253 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++ I IFDSG+GGL V++ +R +P +Y D PYG +++
Sbjct: 4 NPGPESPIGIFDSGVGGLTVVKAVRHALPGERILYFGDTARVPYGPKSQVTIRRYAEDDT 63
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILS 127
+L ++QP + ++ACNT L D + + LG + A A T++ I ++
Sbjct: 64 QALL-RHQPKMIIVACNTVSALALDVVEHAADPLPVLGVLEAGATLAVEVTKNRRIGVIG 122
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ + I+ Q + + + EE + ++ + +
Sbjct: 123 TQATVCSNAYAYAINRLDPQIEVFSRACPLFVPLAEEGM----VNDEATRLIARQYLLPL 178
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
G+ D +VL CTHYP++ V + V +D+++++A R +L + +R
Sbjct: 179 VGEGIDTLVLGCTHYPILRRVIEETVGPAVRIIDSAEAVATRTETMLMKAGMLASRTEPP 238
Query: 248 H-ALFLSGKPDIA 259
L +S P
Sbjct: 239 VPHLMVSDLPQKF 251
>gi|187250694|ref|YP_001875176.1| glutamate racemase [Elusimicrobium minutum Pei191]
gi|186970854|gb|ACC97839.1| Glutamate racemase [Elusimicrobium minutum Pei191]
Length = 264
Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats.
Identities = 54/252 (21%), Positives = 117/252 (46%), Gaps = 7/252 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL +L+ ++ +P+ +FIY D PYG+ + + + + L
Sbjct: 3 NKPIGIFDSGLGGLTILRALQNDLPKENFIYFGDSARVPYGSKSKSTVLQYSLEIA-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK-QAAAYTQSGLISILSTPAT 131
+ V+ACNTA + L+ S+ G + A A T++ ++++ T T
Sbjct: 62 ETQNIKFLVVACNTASAFALEALKKEL-SIPVFGVIEAGAYAAVTKTKNKKVAVIGTSGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +I+++ + + +++ + +EE + K E +
Sbjct: 121 VSSGSYKKVINAFDKKVKVFEIATPLFVPFIEEGWADTR----AAKLVAEEYLSAVKKSG 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
+D ++L CTHYP+I + +++ V+ +D++++I++ L + +T+ ++
Sbjct: 177 SDTLILGCTHYPIIKTLIKKIMGSKVNLIDSAETISKATAGFLKSKDMLKTKGSGSVKIY 236
Query: 252 LSGKPDIAMRRL 263
S PD+ ++
Sbjct: 237 ASDAPDLFAKKA 248
>gi|152998730|ref|YP_001364411.1| glutamate racemase [Shewanella baltica OS185]
gi|166231052|sp|A6WHQ9|MURI_SHEB8 RecName: Full=Glutamate racemase
gi|151363348|gb|ABS06348.1| glutamate racemase [Shewanella baltica OS185]
Length = 274
Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 11/256 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L L E+ ++ + +
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N +
Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRR------ 229
Query: 252 LSGKPDIAMRRLMQGF 267
++ + + + MQ F
Sbjct: 230 VTNEREAVGQSAMQAF 245
>gi|188532303|ref|YP_001906100.1| glutamate racemase [Erwinia tasmaniensis Et1/99]
gi|229486272|sp|B2VGA6|MURI_ERWT9 RecName: Full=Glutamate racemase
gi|188027345|emb|CAO95190.1| Glutamate racemase [Erwinia tasmaniensis Et1/99]
Length = 283
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 83/261 (31%), Positives = 145/261 (55%), Gaps = 4/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + + +
Sbjct: 20 LRPTVLIFDSGVGGLSVYNEIRTLLPDLHYLYAFDNVAFPYGEKSEAFIVERVLDIVTAV 79
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T
Sbjct: 80 TGLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT L+ + +C ++ S L E G + +E+++ ++ + +
Sbjct: 139 VKRPYTHELVARFAGECKTEMLGSGELVDIAEAKLHGQPVAIEEVRRILQPWL--RMAEP 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL
Sbjct: 197 PDTVVLGCTHFPLISEELQQVLPQGTRLIDSGAAIARRTVWLLENESPEVLSADDNMALC 256
Query: 252 LS-GKPDIAMRRLMQGFGLKS 271
L + + + ++Q +G K+
Sbjct: 257 LEITEQTVQLIPVLQRYGFKT 277
>gi|323974257|gb|EGB69387.1| glutamate racemase [Escherichia coli TW10509]
Length = 289
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 250 AKSADVNIAFCMAMTPEAEQLLPVLQRYGFET 281
>gi|309791176|ref|ZP_07685708.1| glutamate racemase [Oscillochloris trichoides DG6]
gi|308226738|gb|EFO80434.1| glutamate racemase [Oscillochloris trichoides DG6]
Length = 256
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 120/253 (47%), Gaps = 8/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P++ +Y+AD PYG ++ R + +L +
Sbjct: 2 IGVFDSGLGGLSVLRAIRERLPDHDLLYLADSAYCPYGPRPAAEVRVRAQVCANWLL-QQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA + D+LR+ P + +G P +K A A +++G + +L+T TLR
Sbjct: 61 GADLIVIACNTATSAAADQLRAELP-VPVIGLEPGLKPAIAASRNGRVGVLATSGTLRGE 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL+ + S+ I + S L VE E++ + G + D +
Sbjct: 120 RFMNLVRRFASRAQIFTMPSPDLVGYVEAGDLNGP----EVRAALTGYLEPLRSQGVDAV 175
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+P + + +L+ ++ +D ++A + ++ +G
Sbjct: 176 VLGCTHFPFLRPLIAELAGPEIEIIDTGPAVAEQVSRIVEVYAI--DPDGGTLRFATTGD 233
Query: 256 PDIAMRRLMQGFG 268
P+ L++ +G
Sbjct: 234 PEAVGPPLVRIWG 246
>gi|168334522|ref|ZP_02692683.1| glutamate racemase [Epulopiscium sp. 'N.t. morphotype B']
Length = 267
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 15/270 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I IFDSG+GGL V++++ + +Y D PYGN + K
Sbjct: 1 MDNRP--------IGIFDSGLGGLTVVKEVMKQLTNESIVYFGDTARVPYGNKSKSTVTK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ +L K +IACNT + ELR FP + G V P + A+ T++G
Sbjct: 53 FSAQIIRFLLSK-DVKAIIIACNTVNSNCAIELRELFPELMIEGVVGPGVIMASRATKNG 111
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ T T++ + + + I + + VE+ ++ K I
Sbjct: 112 RIGVIGTEGTVKSGRYAERLREIHPEYQIFSKACPLFVPLVEDGWTNTEVA----KMVIA 167
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
E + D ++L CTHYP++ + + + ++ ++ A + L + N
Sbjct: 168 TYLNELLEEDIDTLILGCTHYPILSEDIQAVVGKHIKLINPANETAYQMGLHLLQENIQA 227
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
+ H ++S + G K+
Sbjct: 228 VAIPSYH-FYVSDHKEQMQDMAKMFLGCKT 256
>gi|108758013|ref|YP_633888.1| glutamate racemase [Myxococcus xanthus DK 1622]
gi|27804816|gb|AAO22860.1| glutamate racemase [Myxococcus xanthus]
gi|108461893|gb|ABF87078.1| glutamate racemase [Myxococcus xanthus DK 1622]
Length = 271
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 7/263 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + I +FDSG+GGL VL+ + +P +Y+ D PYG + + +
Sbjct: 1 MRQGSHSPIGVFDSGVGGLTVLKALMARLPHESTVYLGDTARVPYGTKSGEVVTRYSLKN 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+L++ L V+ACNTA + L + P +P + A A TQ G + I+
Sbjct: 61 AEFLLERG-IKLLVVACNTASAVALPALEAALPVPVVGVILPGARAALARTQGGGVGIIG 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP T+R + S + + + EE + + E
Sbjct: 120 TPGTIRSGAYQRALESADPRVRAKARACPLFVPLAEEGWTTGDVPLLVAR----DYLAEF 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVF 245
D +VL CTHYPL+ V ++ V +D++++ A LL + +R
Sbjct: 176 TRDGVDTLVLGCTHYPLLKGVIAEVVGPQVALVDSAEATADAVAALLSERDGLAPASRGT 235
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
+HA +++ P+ M + G
Sbjct: 236 PEHAYYVTDVPERFMEVGARFLG 258
>gi|158317397|ref|YP_001509905.1| glutamate racemase [Frankia sp. EAN1pec]
gi|229486274|sp|A8L764|MURI_FRASN RecName: Full=Glutamate racemase
gi|158112802|gb|ABW14999.1| glutamate racemase [Frankia sp. EAN1pec]
Length = 276
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL V + + +P +Y+ D PYG +++ + +++
Sbjct: 4 APIGVFDSGVGGLTVARAILDQLPGESLLYIGDTAHAPYGPRPIAEVRRYALAALDELVS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACN+A + R + VPA ++A A T+SG + ++ T AT+
Sbjct: 64 AG-VKLLVIACNSASAACLRDARERYDVPVVEVIVPATRRAVAATRSGRVGVIGTVATIT 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + V+ VE + ++ E + D
Sbjct: 123 SRAYEDA-FAAAAGTELVSVACPAFVDFVERGITSGR----QLLGLTEAYLAPLQEADVD 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALF 251
++L CTHYPL+ V + V + +++ A+ +L R + H
Sbjct: 178 TVILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLARDGLFRDPDLPPPAHRFL 237
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P R + G
Sbjct: 238 TTGDPAAFARVGRRFLG 254
>gi|145222944|ref|YP_001133622.1| glutamate racemase [Mycobacterium gilvum PYR-GCK]
gi|145215430|gb|ABP44834.1| glutamate racemase [Mycobacterium gilvum PYR-GCK]
Length = 278
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 12/267 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
I IFDSG+GGL V + + +P IYV D PYG ++ + +
Sbjct: 1 MNPDAMRPIGIFDSGVGGLTVARAVIDQLPHEDIIYVGDTGNGPYGPLTIPQIRAHALAI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
D+ + VIACN+A + + R + + + + PA+++A A T++G I ++
Sbjct: 61 GDDLAGRG-IKALVIACNSASSACLRDARERYAPIPVVEVILPAVRRAVAATRNGRIGVI 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT+ + + + V+ VE + ++ E
Sbjct: 120 GTAATIASGAYQDSFAA-ARDIEVFGVACPRFVDFVERGVTSGR----QVLGLAEAYLEP 174
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ + D +VL CTHYP++ + + V + +++ A+ +L + D
Sbjct: 175 LQRAQVDTLVLGCTHYPMLSGLIQLAMGDHVTLVSSAEETAKDLLRVLTERELLKPHTGD 234
Query: 247 DHA-----LFLSGKPDIAMRRLMQGFG 268
A +G P+ + G
Sbjct: 235 PAAPARRVFEATGDPEAFTALAARFLG 261
>gi|117918638|ref|YP_867830.1| glutamate racemase [Shewanella sp. ANA-3]
gi|166231054|sp|A0KRK5|MURI_SHESA RecName: Full=Glutamate racemase
gi|117610970|gb|ABK46424.1| glutamate racemase [Shewanella sp. ANA-3]
Length = 273
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 12/267 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P + + Y+ D+ PYG E+ L + L +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHDYCYLFDNARLPYGELEEQELISGCVALIDQV 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L S L E+ ++ +
Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQKIATGQLD----MVRLTQVLSPIVEAD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---- 247
DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + + +D
Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGQGVTLLDSGEAIAKRVKTLLAETKSDEQVQEEDAHSN 235
Query: 248 ---HALFLSGKPDIAMRRLMQGFGLKS 271
A + + + + G +
Sbjct: 236 LLMQAFYTKAEISEGLATTLVDCGFST 262
>gi|193213389|ref|YP_001999342.1| glutamate racemase [Chlorobaculum parvum NCIB 8327]
gi|229486233|sp|B3QQD9|MURI_CHLP8 RecName: Full=Glutamate racemase
gi|193086866|gb|ACF12142.1| glutamate racemase [Chlorobaculum parvum NCIB 8327]
Length = 272
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSGIGGL VL+ ++ +P +Y D PYG ++K +++L
Sbjct: 10 SPIGIFDSGIGGLTVLKAVQAALPSERLLYFGDTARVPYGTKSQVTIRKYARE-DTELLM 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATL 132
K+QP L ++ACNT L D + T + +G + A + AA T+SG I ++ T AT+
Sbjct: 69 KHQPKLIIVACNTVSALALDVVEQTAGDILVIGVLKAGAELAAHRTKSGRIGVIGTQATI 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
S I + + + EE I + E GK
Sbjct: 129 GSNAYSCAIREENDALEVTPKACPLFVPLAEEGF----IDHPATRLVAEEYLSAFTGKEI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALF 251
D +VL CTHYP++ V ++ + +D+++++A +A+ LL + L
Sbjct: 185 DTLVLGCTHYPILRKVIESIAGPQITIIDSAEAVASKAKELLSKHGLLNQSSATTLPHLM 244
Query: 252 LSGKPDIAMRRLMQGF 267
+S P R L + F
Sbjct: 245 VSDLPQKF-RELYRLF 259
>gi|308177066|ref|YP_003916472.1| glutamate racemase [Arthrobacter arilaitensis Re117]
gi|307744529|emb|CBT75501.1| glutamate racemase [Arthrobacter arilaitensis Re117]
Length = 307
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 106/264 (40%), Gaps = 11/264 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I IFDSG+GGL V + + +P +YV D PYG ++ + +
Sbjct: 13 PEANTPIGIFDSGVGGLTVARAIIDQLPGESLVYVGDTANSPYGPLPIAQVRANALGVMD 72
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISI 125
+++D L VIACN+A + + R + + + + PA+++A A T++G I I
Sbjct: 73 ELVD-GGVKLLVIACNSASAAVLRDARERYTARYGIPVVEVIQPAVRRAVAGTKNGKIGI 131
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+ T AT+ + + + V+ VE E+ + +
Sbjct: 132 IGTQATVGSRAYEDAFAA-APNLQVSTVACPRFVEFVESGIT----AGAELLEIAQEYLA 186
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRV 244
+ + D +VL CTHYPL+ V + V + +++ A+ L R +
Sbjct: 187 PLQAAQVDTLVLGCTHYPLLTGVISYVMGDSVTLVSSAEETAKDVFRALTRHSLVRNDGA 246
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
H +G D + G
Sbjct: 247 AARHEFLATGNADSFGVLARRFLG 270
>gi|331685713|ref|ZP_08386296.1| glutamate racemase [Escherichia coli H299]
gi|323964327|gb|EGB59810.1| glutamate racemase [Escherichia coli M863]
gi|331077184|gb|EGI48399.1| glutamate racemase [Escherichia coli H299]
Length = 289
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281
>gi|319892140|ref|YP_004149015.1| Glutamate racemase [Staphylococcus pseudintermedius HKU10-03]
gi|317161836|gb|ADV05379.1| Glutamate racemase [Staphylococcus pseudintermedius HKU10-03]
gi|323464749|gb|ADX76902.1| glutamate racemase [Staphylococcus pseudintermedius ED99]
Length = 265
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG + +KK + + + +
Sbjct: 1 MDRPIGVMDSGVGGLTVAKEIMRQLPNETIYYLGDVARCPYGPRDQEEVKKFTIEMANYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ +Y + VIACNTA + + L+ + +G + P + A T++ + +L T
Sbjct: 61 V-QYDIKMLVIACNTATAVALEPLQEQLK-IPVIGVIEPGARTAIMTTKNQNVLVLGTEG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I ++ V+ VEE + + I
Sbjct: 119 TIKSEAYRTHIKKINPHVDVYGVACPGFVPLVEEMKYKDPTITNIV---IHQTLKSWRQT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D ++L CTHYPL+ + + AR LL + H H
Sbjct: 176 EADTVILGCTHYPLLYQPIFDYFGKTKTVISSGLETAREVSALLTFSHEHAHYTPQPKHR 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G+ + +
Sbjct: 236 FFANGEVRHMTYIIQEWL 253
>gi|331680091|ref|ZP_08380753.1| glutamate racemase [Escherichia coli H591]
gi|332282913|ref|ZP_08395326.1| glutamate racemase [Shigella sp. D9]
gi|323943616|gb|EGB39723.1| glutamate racemase [Escherichia coli H120]
gi|324115516|gb|EGC09457.1| glutamate racemase [Escherichia coli E1167]
gi|331072417|gb|EGI43750.1| glutamate racemase [Escherichia coli H591]
gi|332105265|gb|EGJ08611.1| glutamate racemase [Shigella sp. D9]
Length = 289
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281
>gi|299131717|ref|ZP_07024912.1| glutamate racemase [Afipia sp. 1NLS2]
gi|298591854|gb|EFI52054.1| glutamate racemase [Afipia sp. 1NLS2]
Length = 265
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 109/256 (42%), Positives = 154/256 (60%), Gaps = 4/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+IL+FDSG+GGL VL+++ P+ + YVADD FPYG E+ A+ R++ L D++
Sbjct: 4 SPAILVFDSGLGGLTVLREITTARPDAAYTYVADDAFFPYGRHEESAIIARVVPLIGDLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ P L VIACNTA TL+ D LR + S+ F+G VPAIK A A +++ +S+L T T+
Sbjct: 64 GRHTPDLVVIACNTASTLVMDHLRKAY-SVPFVGTVPAIKPACASSKTKRVSVLGTRGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI + C + LV + LA+ E G + +D I EI CFIE RT
Sbjct: 123 KREYTKKLIADFAHDCEVTLVGAGNLATLAEAALRGESVSDDAILAEIAPCFIE-GSPRT 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VLACTHYPL++ R+++PW VDW+D + +IARR LL + LF
Sbjct: 182 DTVVLACTHYPLLLEQIRRIAPWTVDWIDPAPAIARRVESLLDKSENENIPAPAKF-LFT 240
Query: 253 SGK-PDIAMRRLMQGF 267
SGK P A+ R +Q F
Sbjct: 241 SGKSPSPALMRALQPF 256
>gi|304412675|ref|ZP_07394279.1| glutamate racemase [Shewanella baltica OS183]
gi|307307285|ref|ZP_07587022.1| glutamate racemase [Shewanella baltica BA175]
gi|304349019|gb|EFM13433.1| glutamate racemase [Shewanella baltica OS183]
gi|306910340|gb|EFN40772.1| glutamate racemase [Shewanella baltica BA175]
Length = 274
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 11/256 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCIALVCDL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L L E+ ++ + +
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N
Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEERR------ 229
Query: 252 LSGKPDIAMRRLMQGF 267
++ + + MQ F
Sbjct: 230 VTNEREALGESAMQAF 245
>gi|126176362|ref|YP_001052511.1| glutamate racemase [Shewanella baltica OS155]
gi|166231051|sp|A3DA79|MURI_SHEB5 RecName: Full=Glutamate racemase
gi|125999567|gb|ABN63642.1| glutamate racemase [Shewanella baltica OS155]
Length = 274
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 11/256 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L L E+ ++ + +
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGQMD----MHRLADLLAPVVAAQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N
Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEERR------ 229
Query: 252 LSGKPDIAMRRLMQGF 267
++ + + MQ F
Sbjct: 230 VTNERETLGESAMQAF 245
>gi|322515537|ref|ZP_08068520.1| glutamate racemase [Actinobacillus ureae ATCC 25976]
gi|322118406|gb|EFX90666.1| glutamate racemase [Actinobacillus ureae ATCC 25976]
Length = 265
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 76/261 (29%), Positives = 135/261 (51%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AA +++ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAVVSETKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + S L VEE ++ ++++ + I +
Sbjct: 120 VERPYVAELIEKYAKDCVVEKIGSTTLVELVEEKIRTGQVDQEQLGEVITEW---QTHPT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSDLLSEFSQENSAQNRENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKMDEEFSKREVIMQQWGFK 257
>gi|121637269|ref|YP_977492.1| glutamate racemase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224989743|ref|YP_002644430.1| glutamate racemase [Mycobacterium bovis BCG str. Tokyo 172]
gi|166231041|sp|A1KIC8|MURI_MYCBP RecName: Full=Glutamate racemase
gi|254766119|sp|C1AMY3|MURI_MYCBT RecName: Full=Glutamate racemase
gi|121492916|emb|CAL71387.1| Probable glutamate racemase murI [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224772856|dbj|BAH25662.1| glutamate racemase [Mycobacterium bovis BCG str. Tokyo 172]
Length = 271
Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++
Sbjct: 6 APVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVG 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACN+A + + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKAL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATIT 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I V+ VE + ++ +G + D
Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVELGVTSGR----QVLGLAQGYLEPLQRAEVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251
+VL CTHYPL+ + + V + +++ A+ +L I+ +
Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFE 239
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ + + G
Sbjct: 240 ATGDPEAFTKLAARFLG 256
>gi|256829170|ref|YP_003157898.1| glutamate racemase [Desulfomicrobium baculatum DSM 4028]
gi|256578346|gb|ACU89482.1| glutamate racemase [Desulfomicrobium baculatum DSM 4028]
Length = 272
Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 5/248 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL VL+ + +P+ F+Y+ D PYG ++ + ++ + +L
Sbjct: 9 PIGVFDSGIGGLTVLKALTEALPKESFLYLGDTARLPYGTKSAKSVTRYVLQ-TTALLKA 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + + L+ +P + +G + P + A +++G I ++ T +T+
Sbjct: 68 RGIKLLVIACNTATGVSLEALQEAYPELPVIGVIRPGAEAACRSSRNGRIGVIGTESTVN 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + EE C +I ++ + G D
Sbjct: 128 ARGYEREILRIRPDAQVFAQACPLFVPLAEEGWCDGQIASLVAERYLGGLV---RDTGID 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+P++ + + V +D++ + A + +L R + T +
Sbjct: 185 TLVLGCTHFPVLADAIQDVVGPDVTLVDSARTTAEFVQDMLERRDICSTTKERCLTFLAT 244
Query: 254 GKPDIAMR 261
R
Sbjct: 245 DGARRFAR 252
>gi|15602782|ref|NP_245854.1| glutamate racemase [Pasteurella multocida subsp. multocida str.
Pm70]
gi|13431696|sp|P57887|MURI_PASMU RecName: Full=Glutamate racemase
gi|12721236|gb|AAK03001.1| MurI [Pasteurella multocida subsp. multocida str. Pm70]
Length = 269
Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 76/260 (29%), Positives = 140/260 (53%), Gaps = 7/260 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +IL FDSG+GG V ++ + L+P+ H++Y D+ FPY + + +R + + I
Sbjct: 6 QPTILFFDSGMGGFSVYKETKQLLPDCHYLYCFDNAFFPYSEKSEEEIIQRTLKICQKID 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA T++ LR+ F ++ +G VPAIK AA +++ I +L+T T+
Sbjct: 66 RTFPLDLIVIACNTASTVVLPALRAHF-AIPVVGTVPAIKPAAECSETKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R Y ++LI Y C + + S L E+ G + +K+E+ + +
Sbjct: 125 KRAYVADLIAQYARDCTVEKLGSTKLVEIAEQKLHGKAVDLHALKQELAPW---QSIQNL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PLI + P ++D+ +IA R + LL +I+ Q++ + + +F
Sbjct: 182 DTVVLGCTHFPLIKEEIKWCLPQVRFFVDSGKAIALRVKTLLSKIDI-QSKTNEKNLIFC 240
Query: 253 SG--KPDIAMRRLMQGFGLK 270
+ + + ++++ +G +
Sbjct: 241 TQFFEDETQFQKVIHFWGFE 260
>gi|187929182|ref|YP_001899669.1| glutamate racemase [Ralstonia pickettii 12J]
gi|229486249|sp|B2U6V5|MURI_RALPJ RecName: Full=Glutamate racemase
gi|187726072|gb|ACD27237.1| glutamate racemase [Ralstonia pickettii 12J]
Length = 282
Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 6/248 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + +
Sbjct: 1 MTTRAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEYIADRTLRV 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++D+ L VIACNTA LR ++ +G P +K A A ++S ++ +L+
Sbjct: 61 CEWLVDQGCKAL-VIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T +TLR + L+ C + L +E + + +
Sbjct: 119 TESTLRSEKFARLLAGASGDCKVLSQPGYGLVPLIERG----DTHSPAVLELLRAYLQPM 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTHYP + +++ + +D ++AR L +
Sbjct: 175 LDANADTLVLGCTHYPFLEDAIHEIAGDRLTLIDTGHAVARHLGRTLAAAGLQASGQAAT 234
Query: 248 HALFLSGK 255
+G
Sbjct: 235 PCFMSTGD 242
>gi|313667842|ref|YP_004048126.1| glutamate racemase [Neisseria lactamica ST-640]
gi|313005304|emb|CBN86737.1| glutamate racemase [Neisseria lactamica 020-06]
gi|325202734|gb|ADY98188.1| glutamate racemase [Neisseria meningitidis M01-240149]
Length = 270
Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|331665623|ref|ZP_08366521.1| glutamate racemase [Escherichia coli TA143]
gi|331057308|gb|EGI29298.1| glutamate racemase [Escherichia coli TA143]
Length = 289
Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G K+
Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFKT 281
>gi|315443407|ref|YP_004076286.1| glutamate racemase [Mycobacterium sp. Spyr1]
gi|315261710|gb|ADT98451.1| glutamate racemase [Mycobacterium sp. Spyr1]
Length = 278
Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 106/267 (39%), Gaps = 12/267 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
I IFDSG+GGL V + + +P+ IYV D PYG ++ + +
Sbjct: 1 MNPDAMRPIGIFDSGVGGLTVARAVIDQLPDEDIIYVGDTGNGPYGPLTIPQIRAHALAI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
D+ + VIACN+A + + R + + + + PA+++A A T++G I ++
Sbjct: 61 GDDLAGRG-IKALVIACNSASSACLRDARERYAPIPVVEVILPAVRRAVAATRNGRIGVI 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT+ + + + V+ VE + ++ E
Sbjct: 120 GTAATIASGAYQDSFAA-ARDIEVFGVACPRFVDFVERGVTSGR----QVLGLAEAYLEP 174
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ + D +VL CTHYP++ + + V + +++ A+ +L + D
Sbjct: 175 LQRAQVDTLVLGCTHYPMLSGLIQLAMGDHVTLVSSAEETAKDLLRVLTERELLKPHTGD 234
Query: 247 DHA-----LFLSGKPDIAMRRLMQGFG 268
A +G P+ + G
Sbjct: 235 PAAPARRVFEATGDPEAFTALAARFLG 261
>gi|312199600|ref|YP_004019661.1| glutamate racemase [Frankia sp. EuI1c]
gi|311230936|gb|ADP83791.1| glutamate racemase [Frankia sp. EuI1c]
Length = 343
Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V + + +P +Y D PYG +++ + ++
Sbjct: 3 DAPIGVFDSGVGGLTVARAILDQLPHEPLLYFGDTAHAPYGPRPIAEVRRLALDAMDTLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA + R + +PA ++A A T+SG + ++ T AT+
Sbjct: 63 AEG-VKLLVIACNTASAACLRDARERYDVPVVEVVLPAARRAVAATRSGRVGVIGTVATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + VS VE ++ E +
Sbjct: 122 TSRAYDDAVAA-APDVTLTSVSCPAFVDFVERG----TTAGRQLLGLAEAYLAPLQEADV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ V + V + +++ A+ +L R + H
Sbjct: 177 DTLILGCTHYPLLTGVIGLVMGESVTLVSSAEETAKDTYRVLARGGLFRDPELPPPVHRF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G P R + G
Sbjct: 237 LATGDPRSFTRIGRRFLG 254
>gi|300780581|ref|ZP_07090436.1| glutamate racemase [Corynebacterium genitalium ATCC 33030]
gi|300533567|gb|EFK54627.1| glutamate racemase [Corynebacterium genitalium ATCC 33030]
Length = 284
Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V + + +P IY+ D PYG ++ M + D++
Sbjct: 18 NAPIGIFDSGFGGLTVARSVMDQLPGESVIYIGDGANGPYGPKPLAEVRGHAMAIADDLV 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA + R + PA+++A A T++G + ++ T AT+
Sbjct: 78 ERG-CKMIVIACNTASAAFLHDARERYSVPVIEVIKPAVRRAVATTRNGKVGVIGTQATI 136
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R +L S + VE ++ +G +
Sbjct: 137 RSGVYQDLF-SLAPGIEATAAACPAFVEFVEAGVT----HGRQVLGVAQGYVEPLQAAGV 191
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251
D +VL CTHYPL+ V + V + +++ A+ +L + + F
Sbjct: 192 DTLVLGCTHYPLLSGVIQLAIGDDVTLVSSAEETAKDVLRILTERDMFADVDHEPARTFE 251
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 252 STGDPEPFHRLGPRFLG 268
>gi|145589323|ref|YP_001155920.1| glutamate racemase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047729|gb|ABP34356.1| glutamate racemase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 268
Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 6/242 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL +L + +PE ++Y+AD PYG + +R + L L
Sbjct: 4 IGVFDSGVGGLSILDEALRQLPENDYLYLADSANAPYGERSSDWIAQRSLALCRY-LANE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA E+R+ S+ +G P IK AA +TQ+G++ +L+T ATL+
Sbjct: 63 GCDAIVVACNTATAQAIQEIRAQL-SIPVIGVEPGIKPAAMHTQNGIVGVLATEATLKSD 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + S C + L +E + + + K +E + +D I
Sbjct: 122 KFNALLATLPSNCRFIKQAGEGLVPLIESGNANSEETLELLAKHLE----PIQDAGSDTI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + R+L + +D SD++ R+ + L + T+ F+S K
Sbjct: 178 VLGCTHYPFLRKSIRKLLGDSITLIDTSDAVVRQLKRQLELLQNLSTKKDVGSVTFISSK 237
Query: 256 PD 257
+
Sbjct: 238 NE 239
>gi|253999852|ref|YP_003051915.1| glutamate racemase [Methylovorus sp. SIP3-4]
gi|253986531|gb|ACT51388.1| glutamate racemase [Methylovorus sp. SIP3-4]
Length = 273
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 6/230 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + +FDSG+GGL VL +R +P+ IY AD + PYG+ + R + L ++
Sbjct: 11 DSPVGVFDSGVGGLSVLAHIRQALPQELLIYAADSMHAPYGSKSQAFIIDRAIQLSDFLI 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA ELRS + + +G PA+K AAA T+SG+I +L+T TL
Sbjct: 71 SRGAKAL-VVACNTATAAAISELRSRY-VIPIIGMEPAVKPAAAATRSGVIGVLATSGTL 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ SY Q + + + L +E +++ ++ +E
Sbjct: 129 QSAQFAALLESYGRQVRVETQACVGLVECIERG----ELQTAATRQLLEKYIQPLLEAGA 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTHYP + + +L+ V +D ++AR+ + L + +
Sbjct: 185 DTLVLGCTHYPFVRPLIEELAGPEVAIIDTGAAVARQLKHRLQEADLLKD 234
>gi|237745618|ref|ZP_04576098.1| glutamate racemase [Oxalobacter formigenes HOxBLS]
gi|229376969|gb|EEO27060.1| glutamate racemase [Oxalobacter formigenes HOxBLS]
Length = 273
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 16/264 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+ +R +P + IY AD PYG+ + + +R + L
Sbjct: 5 SGPIGVFDSGVGGLSVLRHIRSQLPGENLIYFADSGYAPYGDKSEEFVIERAFKIAGFFL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K V+ACNTA + LR +P + +G P +K AAA T +G++ +++T TL
Sbjct: 65 -KQGIKALVVACNTATAITIHLLREKYPELPIVGVEPGLKPAAAKTITGIVGVMATERTL 123
Query: 133 RRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L Q H + +A +E ++ + + + +
Sbjct: 124 ASNKFHVLHQLLNDQTGVHFIMQPCPGMADLIEH----EELDSEPVFNLVRRYLTPILEQ 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLP--RINTHQTRV 244
D +VL CTHYP + HV +++ + +D ++AR+ + LL +N+
Sbjct: 180 NADTVVLGCTHYPFVRHVIEKIAAEAGNPSLHIIDTGYAVARQLKHLLDIYGLNSKGRET 239
Query: 245 FDDHALFLSGKPDIAMR---RLMQ 265
A F SG P R RL+Q
Sbjct: 240 DIQTAAFTSGDPQTISRLIGRLLQ 263
>gi|260892383|ref|YP_003238480.1| glutamate racemase [Ammonifex degensii KC4]
gi|260864524|gb|ACX51630.1| glutamate racemase [Ammonifex degensii KC4]
Length = 265
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 9/255 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL ++ L+P +Y AD + PYG+ L + +L
Sbjct: 5 RPIGLFDSGVGGLTVLAQIVRLLPHESIVYFADTLNLPYGDKTPAELIALGDRIIRFLLA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATL 132
+ V ACNT+ ++ + L+ +P + LG + A + A ++ G I IL+T AT+
Sbjct: 65 QG-VKCVVFACNTSSSISLEVLQQRYP-VPMLGLLQAGARLALKSSRRGRIGILATAATV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I Q + ++ L +E +I E + + +
Sbjct: 123 KSGAYEKAIKDLCPQAQVFSQAAPRLVPLIESG----EIDTPEAEAALREYLTPLKEAGI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++ CTHYP + + V +D + ++ + LL + H +F+
Sbjct: 179 DTLIFGCTHYPFLAPLISSFMGPGVALVDPAVAVVEELKELLSQKGLLANST-PFHRIFV 237
Query: 253 SGKPDIAMRRLMQGF 267
SG P+ RL +
Sbjct: 238 SGDPESF-DRLARRL 251
>gi|255534473|ref|YP_003094844.1| Glutamate racemase [Flavobacteriaceae bacterium 3519-10]
gi|255340669|gb|ACU06782.1| Glutamate racemase [Flavobacteriaceae bacterium 3519-10]
Length = 282
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 7/259 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V ++++ L+P + IY D PYG A+ + +
Sbjct: 19 PDQPIGIFDSGVGGLTVAKEIKRLLPNENLIYFGDTKHLPYGEKSRDAIVGYSTKITRFL 78
Query: 72 LDKYQPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L+K VIACN+A E L + + + + + AY + +++T A
Sbjct: 79 LEK-NCKAIVIACNSATANALKEVLDEVADRVPVIDVINPVAEKVAYEIHNNVGVIATKA 137
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ I + + +++ +L +EE I + + K
Sbjct: 138 TVNSGLYRKSIRKHNKFIKVDELATPLLVPAIEEGFKNHPITH----SIVYNYLSNNKLK 193
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HA 249
+ ++L CTHYPL++ RQ V +D+ +A + R +L + + + +
Sbjct: 194 NIETLILGCTHYPLLIDEIRQYYGNRVRVIDSPGIVANQLRIILDKHQLLNAKNSNTAYQ 253
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+LS + + FG
Sbjct: 254 FYLSDLTKNFEKISKKFFG 272
>gi|313835875|gb|EFS73589.1| glutamate racemase [Propionibacterium acnes HL037PA2]
gi|314927125|gb|EFS90956.1| glutamate racemase [Propionibacterium acnes HL044PA1]
gi|314970768|gb|EFT14866.1| glutamate racemase [Propionibacterium acnes HL037PA3]
gi|328906033|gb|EGG25808.1| glutamate racemase [Propionibacterium sp. P08]
Length = 284
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG ++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRHYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A++ T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASSATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VEE E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIARQYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L +R +
Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLIAYVLGDDVTLISSSHQCARASYSLTAESGLLHSRPRE 237
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 238 SSRYFLTTGNAERFERLGRRLMEGF 262
>gi|189345889|ref|YP_001942418.1| glutamate racemase [Chlorobium limicola DSM 245]
gi|189340036|gb|ACD89439.1| glutamate racemase [Chlorobium limicola DSM 245]
Length = 274
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 7/260 (2%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ + + ++ I IFDSG+GGL V++ M+ ++P IY D PYG+ ++K
Sbjct: 1 MQTHQHKTAPESPIGIFDSGVGGLTVVRAMQAILPAERLIYFGDTARVPYGSKSQVTIRK 60
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSG 121
+ IL +YQP + ++ACNT L D + T ++ +G + A Q A + ++
Sbjct: 61 YAHD-DTAILMRYQPKMIIVACNTVSALALDVVEKTCGNIPVIGVLEAGAQLAVSRSEHK 119
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ T AT+ + I+ S+ +H + + EE +
Sbjct: 120 RIGVIGTQATVCSNAYACAINMLDSEVTVHSKACPLFVPLAEEGFT----DHPATRLIAA 175
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+G D +VL CTHYP++ + Q + +D+++++A RA+ LL
Sbjct: 176 EYLRAFDGHDIDTLVLGCTHYPILRSMIEQTIGPDIRIIDSAEAVACRAKELLTETGMLN 235
Query: 242 -TRVFDDHALFLSGKPDIAM 260
T ++ L +S P
Sbjct: 236 TTSETENPHLLVSDLPQKFS 255
>gi|261879009|ref|ZP_06005436.1| glutamate racemase [Prevotella bergensis DSM 17361]
gi|270334393|gb|EFA45179.1| glutamate racemase [Prevotella bergensis DSM 17361]
Length = 281
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 11/259 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q +I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + + +
Sbjct: 8 QKQGAIGVFDSGYGGLTILHGIRRLLPQYDYIYLGDNARAPYGPRSFDVVYEFTRQSVAK 67
Query: 71 ILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124
+ L +I CNTA +L P LG + P + T++ +
Sbjct: 68 LFA-MGCQLVIIGCNTASAKALRSIQQNDLPQWDPDRRVLGIIRPTAEVIGQLTRNNHVG 126
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T T++ + I Q + + VE + +KK I+
Sbjct: 127 LLATEGTVKSQSYNMEIAKLWPQIQVTGQACPFWVLLVEYNEADSPGADYFVKKRIDQ-- 184
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + D I+L CTH+PL++ ++ V + D +A+ + L R + R+
Sbjct: 185 LMQLDPDIDTIILGCTHFPLLMPKIQKYVKPNVRIVPQGDYVAKSLKAYLERHQDMEARL 244
Query: 245 --FDDHALFLSGKPDIAMR 261
+ F + P+
Sbjct: 245 TRHGTVSYFTTENPEKFKE 263
>gi|171911183|ref|ZP_02926653.1| glutamate racemase [Verrucomicrobium spinosum DSM 4136]
Length = 271
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 10/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG+GGL V++ + L+P IY+ D PYG+ ++K + +L
Sbjct: 7 NAPLGVFDSGVGGLTVVRALLDLLPNESIIYLGDTARVPYGSKSPDTIRKFSVEDTQFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K V+ACNTA +LR F P ++ A + I+ T T+
Sbjct: 67 SKG-VKAVVVACNTATAHALPQLRQMFRVPVVGVLEPGVEATLADPACQRVGIIGTAGTI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + I+ ++ +L VEE I K + K
Sbjct: 126 KSHAYQHELAMRRPDLQIYAEATPLLVPLVEEDW----IDHPATKMVLREYLKPMLDKGM 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTHYPL+ + +++ V +D++ + A + +L +T + ++
Sbjct: 182 DTLVLGCTHYPLLKPLLKRILNNKVRMVDSALTCAEHVKRMLAEQGLERTAKGKPKLEVY 241
Query: 252 LSG----KPDIAMRRLMQGFG 268
L+ ++A R L FG
Sbjct: 242 LTDLSEHSEELAKRFLHTEFG 262
>gi|32035119|ref|ZP_00135171.1| COG0796: Glutamate racemase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126209303|ref|YP_001054528.1| glutamate racemase [Actinobacillus pleuropneumoniae L20]
gi|303251132|ref|ZP_07337316.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307253526|ref|ZP_07535396.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|166231024|sp|A3N3D7|MURI_ACTP2 RecName: Full=Glutamate racemase
gi|126098095|gb|ABN74923.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|302649983|gb|EFL80155.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306859027|gb|EFM91070.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
Length = 265
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K + +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEW---QTHPT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKIDEEFFKREVIMQQWGFK 257
>gi|157157092|ref|YP_001465466.1| glutamate racemase [Escherichia coli E24377A]
gi|157163444|ref|YP_001460762.1| glutamate racemase [Escherichia coli HS]
gi|209921453|ref|YP_002295537.1| glutamate racemase [Escherichia coli SE11]
gi|218556530|ref|YP_002389444.1| glutamate racemase [Escherichia coli IAI1]
gi|218697683|ref|YP_002405350.1| glutamate racemase [Escherichia coli 55989]
gi|256021672|ref|ZP_05435537.1| glutamate racemase [Shigella sp. D9]
gi|260846776|ref|YP_003224554.1| glutamate racemase MurI [Escherichia coli O103:H2 str. 12009]
gi|260858085|ref|YP_003231976.1| glutamate racemase MurI [Escherichia coli O26:H11 str. 11368]
gi|260870687|ref|YP_003237089.1| glutamate racemase MurI [Escherichia coli O111:H- str. 11128]
gi|293472282|ref|ZP_06664692.1| glutamate racemase [Escherichia coli B088]
gi|307314705|ref|ZP_07594302.1| glutamate racemase [Escherichia coli W]
gi|331670825|ref|ZP_08371661.1| glutamate racemase [Escherichia coli TA271]
gi|167017315|sp|A7ZUI7|MURI_ECO24 RecName: Full=Glutamate racemase
gi|167017316|sp|A8A775|MURI_ECOHS RecName: Full=Glutamate racemase
gi|226707585|sp|B6I5I5|MURI_ECOSE RecName: Full=Glutamate racemase
gi|226722985|sp|B7M723|MURI_ECO8A RecName: Full=Glutamate racemase
gi|254766114|sp|B7LA65|MURI_ECO55 RecName: Full=Glutamate racemase
gi|157069124|gb|ABV08379.1| glutamate racemase [Escherichia coli HS]
gi|157079122|gb|ABV18830.1| glutamate racemase [Escherichia coli E24377A]
gi|209914712|dbj|BAG79786.1| glutamate racemase [Escherichia coli SE11]
gi|218354415|emb|CAV01209.1| glutamate racemase [Escherichia coli 55989]
gi|218363299|emb|CAR00948.1| glutamate racemase [Escherichia coli IAI1]
gi|257756734|dbj|BAI28236.1| glutamate racemase MurI [Escherichia coli O26:H11 str. 11368]
gi|257761923|dbj|BAI33420.1| glutamate racemase MurI [Escherichia coli O103:H2 str. 12009]
gi|257767043|dbj|BAI38538.1| glutamate racemase MurI [Escherichia coli O111:H- str. 11128]
gi|291321376|gb|EFE60816.1| glutamate racemase [Escherichia coli B088]
gi|306905760|gb|EFN36286.1| glutamate racemase [Escherichia coli W]
gi|315063302|gb|ADT77629.1| glutamate racemase [Escherichia coli W]
gi|323380635|gb|ADX52903.1| glutamate racemase [Escherichia coli KO11]
gi|331062080|gb|EGI34003.1| glutamate racemase [Escherichia coli TA271]
Length = 285
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277
>gi|228957263|ref|ZP_04119029.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228802454|gb|EEM49305.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 265
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 53/254 (20%), Positives = 104/254 (40%), Gaps = 7/254 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA EL+ S+ +G + P + A T+ I ++ T T++
Sbjct: 60 KALVVACNTAAATALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+H + +H + LA+ VE I + ++++ + + D ++
Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENRLEDI----AYVTQQVKQALLPLTKEDIDTLI 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSV 234
Query: 257 DIAMRRLMQGFGLK 270
+ G +
Sbjct: 235 LSFEHIAERWLGYQ 248
>gi|28275188|ref|NP_715848.2| glutamate racemase [Shewanella oneidensis MR-1]
Length = 302
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 79/269 (29%), Positives = 128/269 (47%), Gaps = 11/269 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E L IL+FDSGIGGL VL ++R +P + + YV D+ PYG E+ L + L
Sbjct: 27 ETGLSQPILVFDSGIGGLSVLAEIRKRLPHHDYCYVFDNARLPYGELEEQELVSGCVALI 86
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S ++++ + V+ACNTA T++ LR+ + +G VPAIK AA ++S I +L+T
Sbjct: 87 SQLVERTHACIVVVACNTASTVVLPALRAKL-HIPVVGVVPAIKPAALLSKSKRIGLLAT 145
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P T++R YT LI + CH+ L L E ++ + +
Sbjct: 146 PGTVKRHYTHELISQFADDCHVELFGCSELVMMAEHKIATGQLGIARLTQI----LSPVV 201
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFD 246
DV+VL CTH+P++ +Q+ V LD+ +IA+R LL +H +
Sbjct: 202 DANLDVLVLGCTHFPMLRDELQQVLGLGVTLLDSGAAIAKRVDTLLAHGKNISHNSEYER 261
Query: 247 D----HALFLSGKPDIAMRRLMQGFGLKS 271
+ A + + + + G +
Sbjct: 262 NGSLMRAFYTKAEITEGLATTLADCGFST 290
>gi|29839535|sp|Q8EK90|MURI_SHEON RecName: Full=Glutamate racemase
gi|24345608|gb|AAN53293.1|AE015470_6 glutamate racemase [Shewanella oneidensis MR-1]
Length = 273
Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + + YV D+ PYG E+ L + L S +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKRLPHHDYCYVFDNARLPYGELEEQELVSGCVALISQL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+ + +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHACIVVVACNTASTVVLPALRAKL-HIPVVGVVPAIKPAALLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L L E ++ + +
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEHKIATGQLGIARLTQI----LSPVVDAN 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD-- 247
DV+VL CTH+P++ +Q+ V LD+ +IA+R LL +H + +
Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGLGVTLLDSGAAIAKRVDTLLAHGKNISHNSEYERNGS 235
Query: 248 --HALFLSGKPDIAMRRLMQGFGLKS 271
A + + + + G +
Sbjct: 236 LMRAFYTKAEITEGLATTLADCGFST 261
>gi|332982127|ref|YP_004463568.1| glutamate racemase [Mahella australiensis 50-1 BON]
gi|332699805|gb|AEE96746.1| glutamate racemase [Mahella australiensis 50-1 BON]
Length = 268
Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 97/262 (37%), Gaps = 16/262 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSG+GGL V++++ +P +Y D PYG + K
Sbjct: 1 MDNRP--------IGVFDSGVGGLTVVKEIMKQLPAEDIVYFGDTARVPYGTRSRDTVIK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSG 121
+ ++ + V+ACNTA + + + F + LG + A T++
Sbjct: 53 FTLQSVRFLMSQG-IKAVVLACNTASAISLEVAQQQF-DVPILGVIEGGAIAAVHATKNK 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I ++ T T+ I + VEE +I ++
Sbjct: 111 RIGVIGTEGTINSGAYERAIKLLDDSIETFAKPCPLFVPLVEEGLQDSEIAYMAARE--- 167
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTH 240
E D +++ CTHYPL+ + R+ V ++ ++ A + LL +
Sbjct: 168 -YLSFFEDTGIDTLLMGCTHYPLMANTIRRAVGTGVKLINPAEKTALILKRTLLQMDILN 226
Query: 241 QTRVFDDHALFLSGKPDIAMRR 262
+ F S + +
Sbjct: 227 DGAKHPRYRYFASDDGERFKKI 248
>gi|238921669|ref|YP_002935184.1| glutamate racemase [Edwardsiella ictaluri 93-146]
gi|238871238|gb|ACR70949.1| glutamate racemase, putative [Edwardsiella ictaluri 93-146]
Length = 260
Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats.
Identities = 81/256 (31%), Positives = 135/256 (52%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG E + +R++ + + + ++
Sbjct: 2 LVFDSGVGGLSVYQEIRALLPDLHYIYAFDNQGFPYGEKEAVFITERVLRIVASLHQRHT 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA T++ LR+ FP +G VPAIK AA T++G++ +L+T AT++R Y
Sbjct: 62 LSAMVVACNTASTIVLPALRARFP-FPVVGVVPAIKPAAKLTRNGIVGLLATRATVQRAY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + + C I ++ S L E G + ++ + E D +V
Sbjct: 121 THELIARFATDCQIKMLGSAELVELAEAKLHGEALDLQRLRTILRPWLTMAEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SGK 255
L CTH+PL+ Q+ P +D+ +IARR L+ T + + A
Sbjct: 179 LGCTHFPLLRDELAQVLPAGTRLVDSGAAIARRVAWLIANQATLPGKDMRNVAYATQCDA 238
Query: 256 PDIAMRRLMQGFGLKS 271
A+ +++ G ++
Sbjct: 239 QTAALLPVLRQLGFET 254
>gi|325128817|gb|EGC51677.1| glutamate racemase [Neisseria meningitidis N1568]
Length = 255
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 8/246 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKP 256
++S P
Sbjct: 241 YVSDIP 246
>gi|145297189|ref|YP_001140030.1| glutamate racemase [Aeromonas salmonicida subsp. salmonicida A449]
gi|142849961|gb|ABO88282.1| glutamate racemase [Aeromonas salmonicida subsp. salmonicida A449]
Length = 263
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 137/261 (52%), Gaps = 8/261 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL + +++R +P +++ Y D+ FPYG + AL L S ++
Sbjct: 2 ANILVFDSGMGGLTIYREIRRALPAHNYFYCFDNANFPYGELSESALIAACTRLVSHMVA 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ L VIACNTA T+ LR+ ++ +G VPAIK AAA T++G I +L+TP T+
Sbjct: 62 EHVIDLVVIACNTASTIALPSLRAAL-TIPVVGVVPAIKPAAALTRNGCIGLLATPGTVS 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI + + L + L E G + +++ + + +R D
Sbjct: 121 REYTHHLIAQFAPGKRVLLKGATELVIEAEHKLAGRPVNMALLQEVLTDWM--EGEERPD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+PL+ RQL P +D+ ++ARR LL + ++ + +
Sbjct: 179 TLVLGCTHFPLLNDEIRQLMP-GCQLVDSGSAVARRVAHLLATVAEQPSQAVVQARAYCT 237
Query: 254 GKPDIAMRRL---MQGFGLKS 271
+ D ++L +Q +GL S
Sbjct: 238 -RLDAQAQKLTAPLQAWGLSS 257
>gi|254671042|emb|CBA07884.1| Glutamate racemase [Neisseria meningitidis alpha153]
gi|325132881|gb|EGC55559.1| glutamate racemase [Neisseria meningitidis M6190]
Length = 327
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 123
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 124 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 183 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 238
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 239 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 298 YVSDIPLKFRTIGERFLG 315
>gi|220906704|ref|YP_002482015.1| glutamate racemase [Cyanothece sp. PCC 7425]
gi|219863315|gb|ACL43654.1| glutamate racemase [Cyanothece sp. PCC 7425]
Length = 295
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 12/268 (4%)
Query: 6 YPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
P + L Q SI +FDSG+GGL VL+ ++ +P+ F+Y AD PYGN +
Sbjct: 14 RPANQSLSQQASIGVFDSGVGGLTVLRVLQQHLPQESFLYFADTAHLPYGNRCQAEIVTF 73
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122
+ + + ++ + ++ACNT+ L D +R+ F ++ LG + P + A +
Sbjct: 74 ARQILTWMTEQG-VKMVIVACNTSSALALDIVRTEF-NLPILGLILPGARTAVQ--RGKR 129
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I I++T AT+ I Q + +S +E+ +I + +
Sbjct: 130 IGIIATAATVASECYPQAILEANPQLQVWQMSCPEFVPLIEQN----RINDPYTLEVART 185
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQ 241
R D ++ CTHYP + V R++ P V +D + S+ A L + Q
Sbjct: 186 YLQPLIESRIDTLIYGCTHYPHLESVIRKVLPRSVQRIDPARSVVTAAARELELLGLRKQ 245
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGFGL 269
+R F SG P+ R Q G
Sbjct: 246 SRQTSSTRFFASGCPEQFARVSSQWLGY 273
>gi|229143571|ref|ZP_04271996.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|296501581|ref|YP_003663281.1| glutamate racemase [Bacillus thuringiensis BMB171]
gi|228639927|gb|EEK96332.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|296322633|gb|ADH05561.1| glutamate racemase [Bacillus thuringiensis BMB171]
Length = 276
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA EL+ S+ +G + P + A T+ I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE I + ++++ + +
Sbjct: 125 IKSNMYEKALHELDTYLEVHSHACPNLATVVENRLEDI----AYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVLSFEHIAERWLGYQ 259
>gi|159036256|ref|YP_001535509.1| glutamate racemase [Salinispora arenicola CNS-205]
gi|157915091|gb|ABV96518.1| glutamate racemase [Salinispora arenicola CNS-205]
Length = 293
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 102/261 (39%), Gaps = 12/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +Y+ D PYG +++ + ++
Sbjct: 3 DAPIGIFDSGVGGLTVARALTDQLPGEDLVYLGDTAHVPYGPKPIADVRRHALACLDQLM 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D L VIACN+A + R + PA+++A A T++G + ++ T AT+
Sbjct: 63 DAGA-KLLVIACNSAAAACLHDARERYSVPVVEVIRPAVRRAVAATRNGRVGVIGTSATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V+ VE + +
Sbjct: 122 TSGAYEDAFAA-APHITVTGVACPEFVEFVERGITSG----SALHSIAQRYLTPLRASGI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-----PRINTHQTRVFDD 247
D +VL CTHYPL+ + + V + ++D A++ LL PR ++R
Sbjct: 177 DTLVLGCTHYPLLAGLLNLVMGNGVTLVSSADEAAKKVYRLLTEGVVPRRADDESRPA-R 235
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
H +G P R + G
Sbjct: 236 HRFIATGDPAPFERLTSRFLG 256
>gi|304386743|ref|ZP_07369012.1| glutamate racemase [Neisseria meningitidis ATCC 13091]
gi|304339178|gb|EFM05263.1| glutamate racemase [Neisseria meningitidis ATCC 13091]
Length = 327
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 123
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 124 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 183 VNSNAYARAIHRSNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 238
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 239 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 298 YVSDIPLKFRTIGERFLG 315
>gi|293371702|ref|ZP_06618113.1| glutamate racemase [Bacteroides ovatus SD CMC 3f]
gi|299147392|ref|ZP_07040457.1| glutamate racemase [Bacteroides sp. 3_1_23]
gi|292633399|gb|EFF51969.1| glutamate racemase [Bacteroides ovatus SD CMC 3f]
gi|298514670|gb|EFI38554.1| glutamate racemase [Bacteroides sp. 3_1_23]
Length = 280
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P+ LG + P ++ +++ I +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECVGEISKNQHIGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + + + + S VE + + I+K I+
Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + +
Sbjct: 247 GNCQFYTTEAEEKFSE 262
>gi|325130825|gb|EGC53559.1| glutamate racemase [Neisseria meningitidis OX99.30304]
Length = 270
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIEHFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|121635399|ref|YP_975644.1| glutamate racemase [Neisseria meningitidis FAM18]
gi|20177991|sp|Q9RMM3|MURI_NEIMC RecName: Full=Glutamate racemase
gi|166231045|sp|A1KVG8|MURI_NEIMF RecName: Full=Glutamate racemase
gi|6449085|gb|AAF08814.1|AF194079_1 MurI [Neisseria meningitidis]
gi|120867105|emb|CAM10872.1| glutamate racemase [Neisseria meningitidis FAM18]
gi|261391971|emb|CAX49435.1| glutamate racemase [Neisseria meningitidis 8013]
gi|325142940|gb|EGC65299.1| glutamate racemase [Neisseria meningitidis 961-5945]
gi|325205523|gb|ADZ00976.1| glutamate racemase [Neisseria meningitidis M04-240196]
Length = 270
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|284924068|emb|CBG37167.1| glutamate racemase [Escherichia coli 042]
Length = 285
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G K+
Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFKT 277
>gi|113474067|ref|YP_720128.1| glutamate racemase [Trichodesmium erythraeum IMS101]
gi|122965316|sp|Q11A19|MURI_TRIEI RecName: Full=Glutamate racemase
gi|110165115|gb|ABG49655.1| glutamate racemase [Trichodesmium erythraeum IMS101]
Length = 270
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I IFDSGIGGL VL+++ +P+ +Y AD PYG + + + + + ++
Sbjct: 7 QKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDEIITWLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPAT 131
+ ++ACNT+ L ++++S F + LG VP A Q I +++TPAT
Sbjct: 67 KSG-VKMVLMACNTSSALALEKVKSKF-DVPILGLIVPGANTAVK--QGKRIGVIATPAT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I + + V +E+ ++ + + E + ++
Sbjct: 123 AASNAYRYAILEANASVQVWQVGCPYFVPLIEQN----QLHDPYTYQIAEEYLMPLIQQQ 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +V CTHYP + + R L P V ++D + S+ + L +N +
Sbjct: 179 IDTLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFV 238
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+S P +Q G K
Sbjct: 239 VSSSPQKFADLSLQLLGYK 257
>gi|148655659|ref|YP_001275864.1| glutamate racemase [Roseiflexus sp. RS-1]
gi|189030367|sp|A5UTG1|MURI_ROSS1 RecName: Full=Glutamate racemase
gi|148567769|gb|ABQ89914.1| glutamate racemase [Roseiflexus sp. RS-1]
Length = 272
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 7/252 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSGIGG+ VL+++R L+P + +Y+AD PYG+ L+ + ++
Sbjct: 7 RPIGLFDSGIGGMTVLREVRRLLPGENLLYLADQARCPYGSRSPDELRAIAAACAAWLIA 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA +LR FP++ F+G VP +K AA+ T+SG++ +L+TPATL
Sbjct: 67 RGA-KLVVVACNTASAAALADLRRRFPAIPFVGMVPPVKPAASRTRSGVVGVLATPATLA 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
++I + H+ + L ++EE A + E + G D
Sbjct: 126 GDLLHDVISRWAEGVHVIEQACPGLVEQIEEGA----LDSPETMALLRGYVTPLLDAGAD 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHALF 251
IVL CTHYPL+V R ++ LD + ++A+R ++ + +
Sbjct: 182 TIVLGCTHYPLLVPQLRAIAGDDTLILDAAPAVAQRVAQIVQERGLMRNVNTLSGAITCA 241
Query: 252 LSGKPDIAMRRL 263
+G P+ +
Sbjct: 242 TTGDPERFANLI 253
>gi|325134824|gb|EGC57460.1| glutamate racemase [Neisseria meningitidis M13399]
Length = 270
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT ++ ++R +M L + A K A + T++ I I++T T
Sbjct: 67 E-HDVKAMVIACNTIAAVVGQKIRQKTGNMPVLDVISAGAKAALSTTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|225076304|ref|ZP_03719503.1| hypothetical protein NEIFLAOT_01345 [Neisseria flavescens
NRL30031/H210]
gi|224952428|gb|EEG33637.1| hypothetical protein NEIFLAOT_01345 [Neisseria flavescens
NRL30031/H210]
Length = 269
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 8/263 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M +
Sbjct: 1 MSTSKQRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126
+L+ VIACNT + +R +M L + A + A T++ I I+
Sbjct: 61 VDFLLE-NDVKALVIACNTIAAVAGQRIRQKAGNMPVLDVISAGAEAALQTTKNNRIGII 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ + IHS + + ++ +L VEE ++ +++ ++ +
Sbjct: 120 ATNTTVNSNAYARAIHSKNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLAD 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-F 245
D +VL CTH+PL+ + + + V +D++ + A L + T
Sbjct: 180 ----DIDTLVLGCTHFPLLKPLIGREA-QNVTLVDSAITTAEATAKALAQAGLLNTENDN 234
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
D+ ++S P + G
Sbjct: 235 PDYRFYVSDIPLRFRTIGERFLG 257
>gi|254360933|ref|ZP_04977079.1| glutamate racemase [Mannheimia haemolytica PHL213]
gi|261492190|ref|ZP_05988760.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494308|ref|ZP_05990803.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|153092412|gb|EDN73475.1| glutamate racemase [Mannheimia haemolytica PHL213]
gi|261310038|gb|EEY11246.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312170|gb|EEY13303.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 263
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 78/260 (30%), Positives = 134/260 (51%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + ++R ++P H++Y D+ FPY + L +R + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDEIRKVLPHAHYLYCFDNAFFPYSEKSEAVLIERAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+K + V+ACNTA T++ LR F + +G VPAIK AAA +++ +I +L+T T
Sbjct: 61 AEKQPLDMVVVACNTASTVVLPALREHF-NFPIVGTVPAIKPAAAISETKVIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y LI Y C + + + L VEE K+ + ++K +E +
Sbjct: 120 VARPYVDELIRKYAQDCTVEKIGTTDLVEIVEEKQRSGKVDMNRLQKVVEAW---QGKPE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D IA+R LL Q F++ A
Sbjct: 177 LDTVILGCTHFPLVKAELQQLLPDVKYFVDPGVGIAKRVLSLLEERKFQQKADFENQAFC 236
Query: 252 LSGKPDIAMRR-LMQGFGLK 270
+++ +MQ +G
Sbjct: 237 TKQSSAFNIKQDVMQNWGFN 256
>gi|160885540|ref|ZP_02066543.1| hypothetical protein BACOVA_03540 [Bacteroides ovatus ATCC 8483]
gi|156109162|gb|EDO10907.1| hypothetical protein BACOVA_03540 [Bacteroides ovatus ATCC 8483]
Length = 280
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P+ LG + P ++ +++ I +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECIGEISKNQHIGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + + + + S VE + + I+K I+
Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + +
Sbjct: 247 GNCQFYTTEAEEKFSE 262
>gi|331675461|ref|ZP_08376211.1| glutamate racemase [Escherichia coli TA280]
gi|331067521|gb|EGI38926.1| glutamate racemase [Escherichia coli TA280]
Length = 289
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281
>gi|331655667|ref|ZP_08356659.1| glutamate racemase [Escherichia coli M718]
gi|12518894|gb|AAG59171.1|AE005628_7 glutamate racemase, required for biosynthesis of D-glutamate and
peptidoglycan [Escherichia coli O157:H7 str. EDL933]
gi|13364374|dbj|BAB38321.1| glutamate racemase [Escherichia coli O157:H7 str. Sakai]
gi|73857946|gb|AAZ90653.1| glutamate racemase [Shigella sonnei Ss046]
gi|81242998|gb|ABB63708.1| glutamate racemase [Shigella dysenteriae Sd197]
gi|81247728|gb|ABB68436.1| glutamate racemase [Shigella boydii Sb227]
gi|209751918|gb|ACI74266.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751920|gb|ACI74267.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751922|gb|ACI74268.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751924|gb|ACI74269.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751926|gb|ACI74270.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|331046768|gb|EGI18853.1| glutamate racemase [Escherichia coli M718]
Length = 289
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281
>gi|218707594|ref|YP_002415113.1| glutamate racemase [Escherichia coli UMN026]
gi|218434691|emb|CAR15624.2| glutamate racemase [Escherichia coli UMN026]
Length = 289
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281
>gi|261380865|ref|ZP_05985438.1| glutamate racemase [Neisseria subflava NJ9703]
gi|319638648|ref|ZP_07993408.1| glutamate racemase [Neisseria mucosa C102]
gi|284796337|gb|EFC51684.1| glutamate racemase [Neisseria subflava NJ9703]
gi|317400032|gb|EFV80693.1| glutamate racemase [Neisseria mucosa C102]
Length = 269
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 8/263 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M +
Sbjct: 1 MSTSKQRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126
+L+ VIACNT + ++R +M L + A + A T++ I I+
Sbjct: 61 VDFLLE-NDVKALVIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALQTTKNNRIGII 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ + IHS + + ++ +L VEE ++ +++ ++ +
Sbjct: 120 ATNTTVNSNAYARAIHSQNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLAD 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-F 245
D +VL CTH+PL+ + + + V +D++ + A L + T
Sbjct: 180 ----DIDTLVLGCTHFPLLKPLIGREA-QNVTLVDSAITTAEATAKALAQAGLLNTENDN 234
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
D+ ++S P + G
Sbjct: 235 PDYRFYVSDIPLRFRTIGERFLG 257
>gi|256425483|ref|YP_003126136.1| glutamate racemase [Chitinophaga pinensis DSM 2588]
gi|256040391|gb|ACU63935.1| glutamate racemase [Chitinophaga pinensis DSM 2588]
Length = 272
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 11/258 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FDSG GGL VL+++ +P+Y +IY D+ PYGN + + +
Sbjct: 1 MTGPIGVFDSGYGGLTVLKEIVATLPQYDYIYFGDNARAPYGNRGFDTIHTYTLQCVQHL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLISI 125
D P L ++ACNTA ++ P LG + P + TQSG + I
Sbjct: 61 FDMGCP-LVILACNTASARALRTIQQKDLPRIAPDRRVLGVIRPTTEMVGTLTQSGEVGI 119
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T+ I+ + +H ++ + +E + + +KK ++
Sbjct: 120 LATKGTVASESYPIEINKFFPHVKVHQLACPMWVPIIENGEADSEGADYFVKKYLDQILT 179
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +VLACTHYP++ RQ P + L +A + L R + R+
Sbjct: 180 --DAPDIDTLVLACTHYPILTKKIRQFLPGGITLLSQGKIVAHGLKDYLHRHPEMEVRLS 237
Query: 246 DD--HALFLSGKPDIAMR 261
+ F + P I +
Sbjct: 238 KNGGRKYFTTDDPVIFEK 255
>gi|314930288|gb|EFS94119.1| glutamate racemase [Propionibacterium acnes HL067PA1]
Length = 284
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA +A+A T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAACRASAATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VEE E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ + +
Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 237
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|308388659|gb|ADO30979.1| glutamate racemase [Neisseria meningitidis alpha710]
Length = 270
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 8/246 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKP 256
++S P
Sbjct: 241 YVSDIP 246
>gi|193214141|ref|YP_001995340.1| glutamate racemase [Chloroherpeton thalassium ATCC 35110]
gi|193087618|gb|ACF12893.1| glutamate racemase [Chloroherpeton thalassium ATCC 35110]
Length = 278
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 7/262 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I IFDSGIGGL V++K+R +P IY D PYG +++ +
Sbjct: 13 KAERPIGIFDSGIGGLTVVRKIRERLPNERLIYFGDTARVPYGTKSQVTVRRYAAE-DTR 71
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129
+L KYQP + V+ACNT L D + + LG + A A Y+Q+ I ++ T
Sbjct: 72 LLLKYQPKMIVVACNTVSALALDVVEHESGGLPVLGVLKAGANLAVKYSQTKHIGVIGTI 131
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ I + ++ + + EE I K E
Sbjct: 132 ATISSNAYPLEISKLDCEAEVYSKACPLFVPLAEEGF----ISHQATKLIATEYLTELLV 187
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
K+ D +VL CTHYP++ + +++ V +D+++++A LL + +
Sbjct: 188 KKIDSLVLGCTHYPILKSMLAEVTGKNVVIIDSAEAVAMEVENLLREKSLLNREINQALP 247
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
+ +S P GL
Sbjct: 248 KVLVSDLPQKFKTMFELFLGLS 269
>gi|116617725|ref|YP_818096.1| glutamate racemase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|116096572|gb|ABJ61723.1| glutamate racemase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
Length = 291
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSGIGGL V+++ + +P IY+ D PYG + + + ++
Sbjct: 17 NNPIGLVDSGIGGLTVVKESQKQLPNEQLIYIGDTARMPYGPRSEKEVIDYTFQMAHYLV 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA +LR + +G + P + A + +Q+ I +++T T
Sbjct: 77 NEQNIKMLVIACNTATARALSQLREQL-CIPVIGVIQPGAEAAVSISQNKKIGLIATQGT 135
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + I + + VE + DE ++ I +
Sbjct: 136 VESQVYNEKMLAIDNNVQITSQAEPEFVTLVENNL----YQSDEAREVIAHHLSAFKEAN 191
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHA 249
D ++L CTH+PL+ ++ V +D+ + L ++ H D
Sbjct: 192 IDTLILGCTHFPLLTPFIQEAVGSDVTLVDSGAKTVAVMKQYLDELDIHSEVKHNHSDDI 251
Query: 250 LFLSGKPDIAMRRLMQGF 267
+G
Sbjct: 252 YNTTGDKLKFKTIASSWL 269
>gi|260172140|ref|ZP_05758552.1| glutamate racemase [Bacteroides sp. D2]
gi|315920449|ref|ZP_07916689.1| glutamate racemase [Bacteroides sp. D2]
gi|313694324|gb|EFS31159.1| glutamate racemase [Bacteroides sp. D2]
Length = 280
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P+ LG + P ++ +++ I +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECVEEISKNQHIGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + + + + S VE + + I+K I+
Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + +
Sbjct: 247 GNCQFYTTEAEEKFSE 262
>gi|300932724|ref|ZP_07147980.1| glutamate racemase [Corynebacterium resistens DSM 45100]
Length = 270
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + L+P + +Y+ D PYG+ +++ + + +++
Sbjct: 4 NAPIGIFDSGVGGLTVARAVVDLLPRENIVYIGDTANSPYGDKPLAQVRQLSIAIADELV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + V+ACN+A + + R +P +PA+++A A T++G + ++ T AT+
Sbjct: 64 ERG-CKMIVVACNSASSAFIRDARERYPVPVIEVILPAVRRAVAATRNGKVGVIGTHATV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L + + + VE +I E +
Sbjct: 123 TSGSYQDLFAA-SPNVEVTAQACPQFVPFVERGIT----TGRQIVGLAENYLEPLKDAGV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYPL+ V + + V ++++D A+ L + D +
Sbjct: 178 DTVVLGCTHYPLLAGVVQLVMGDDVTLVNSADETAKMTYRALSEADMLADEDPDREVKLV 237
Query: 253 ---SGKPDIAMRRLMQGFG 268
+G P + G
Sbjct: 238 FESTGDPQRFAHLAQRFLG 256
>gi|217975220|ref|YP_002359971.1| glutamate racemase [Shewanella baltica OS223]
gi|254766123|sp|B8EBM4|MURI_SHEB2 RecName: Full=Glutamate racemase
gi|217500355|gb|ACK48548.1| glutamate racemase [Shewanella baltica OS223]
Length = 274
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 11/256 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT +LI + CH+ L L E+ ++ + +
Sbjct: 120 VKRHYTHSLISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N +
Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNFIVEQRR------ 229
Query: 252 LSGKPDIAMRRLMQGF 267
++ + + MQ F
Sbjct: 230 VTNEREAVGESAMQAF 245
>gi|269140807|ref|YP_003297508.1| glutamate racemase [Edwardsiella tarda EIB202]
gi|267986468|gb|ACY86297.1| glutamate racemase [Edwardsiella tarda EIB202]
gi|304560567|gb|ADM43231.1| Glutamate racemase [Edwardsiella tarda FL6-60]
Length = 260
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 81/256 (31%), Positives = 134/256 (52%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG E + R++ + + + ++
Sbjct: 2 LVFDSGVGGLSVYQEIRALLPDLHYIYAFDNQGFPYGEKEAAFITDRVLRIVASLHQRHT 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA T++ LR+ FP +G VPAIK AA T++G++ +L+T AT++R Y
Sbjct: 62 LSAMVVACNTASTIVLPALRARFP-FPVVGVVPAIKPAAKLTRNGVVGLLATRATVQRAY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + + C I ++ S L E G + ++ + E D +V
Sbjct: 121 THELIARFATDCQIKMLGSAELVELAEAKLHGEALDLQRLRTILRPWLTMAEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SGK 255
L CTH+PL+ Q+ P +D+ +IARR L+ T + + A
Sbjct: 179 LGCTHFPLLRDELAQVLPAGTRLVDSGAAIARRVAWLIANQVTLPGKDMRNVAYATQCDA 238
Query: 256 PDIAMRRLMQGFGLKS 271
A+ +++ G ++
Sbjct: 239 QTAALLPVLRQMGFET 254
>gi|296448272|ref|ZP_06890166.1| glutamate racemase [Methylosinus trichosporium OB3b]
gi|296254224|gb|EFH01357.1| glutamate racemase [Methylosinus trichosporium OB3b]
Length = 280
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 113/273 (41%), Positives = 161/273 (58%), Gaps = 5/273 (1%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ + P IL+FDSG+GGL V ++ L P +Y ADD GFPYG + AL
Sbjct: 1 MSSAPTISSAPK-ILVFDSGLGGLTVFVEVAKLRPHATLLYCADDAGFPYGPLSEEALVA 59
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R+M + ++ + P L VIACNTA T + LR+ +P++ F+G VPA+K AA ++S L
Sbjct: 60 RVMLVMESLVAAHAPDLVVIACNTASTRVLPHLRARWPNLPFVGTVPAVKPAAERSRSRL 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
IS+L+TP T+ R YT LI S+ C LV S LA E++ G + E EI EI
Sbjct: 120 ISVLATPGTVTRDYTRALIASFAEGCEATLVGSSRLAPIAEDFLRGAAVSEAEIAAEIAP 179
Query: 183 CFIE-KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTH 240
CF++ +G RTDV+VLACTHYPL++ FR+L+PWPV+W+D + +IAR+A R LL R
Sbjct: 180 CFVQRPDGARTDVVVLACTHYPLLLDFFRRLAPWPVEWIDPAPAIARQADRLLLQRFGAD 239
Query: 241 Q-TRVFDDHALFLSG-KPDIAMRRLMQGFGLKS 271
+ A+F SG +P + + G +
Sbjct: 240 RIGFREPPRAIFTSGARPVPPLAAALSRLGFAA 272
>gi|51891480|ref|YP_074171.1| glutamate racemase [Symbiobacterium thermophilum IAM 14863]
gi|81610699|sp|Q67SL6|MURI_SYMTH RecName: Full=Glutamate racemase
gi|51855169|dbj|BAD39327.1| glutamate racemase [Symbiobacterium thermophilum IAM 14863]
Length = 277
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q I +FDSG GGL V + + L+P+ + IY D FPYG ++
Sbjct: 6 PDTQRPIGLFDSGEGGLTVARAVADLLPQENLIYACDTAHFPYGPRPLAEVRAFFRRFME 65
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
+++ L ++ACNTA D L + + LG V P AA + +G I + +T
Sbjct: 66 FFVEQ-NCKLVIVACNTATAAAIDLLLADAFPIPALGVVQPGAAMAAEASVTGRIGVAAT 124
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T I + ++ + IL R EE I E+++E+E C
Sbjct: 125 QGTCDSGIYPQTIRLFRPDAYVVQQACPILVIRAEEGV----ISGPEVRREVERCLAPIL 180
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD- 247
+R D +VL CTH+P + V + + V +D + A + LL R
Sbjct: 181 AERVDTLVLGCTHFPHMAKVIQDVVGPAVRLVDPGKATAVQVADLLRRRGLLNPGPGPGQ 240
Query: 248 HALFLSGKPDIAMRRLMQGF 267
F +G P + + +
Sbjct: 241 RRAFTTGDPQRFLEVACRLW 260
>gi|330444840|ref|ZP_08308495.1| glutamate racemase [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489150|dbj|GAA02992.1| glutamate racemase [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 269
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 81/222 (36%), Positives = 126/222 (56%), Gaps = 6/222 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D L +R ++ S +++
Sbjct: 5 KKIVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELPDDVLIERTNYIVSTLVE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+YQ L VIACNTA T++ LR ++ +G VPAIK AA +Q+ +I +L+TPAT++
Sbjct: 65 QYQADLVVIACNTASTIVLPTLRKHL-TVPVVGVVPAIKPAAKLSQTKVIGLLATPATVK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R+YT LI + S C + ++ S L E+ G I DE+ + ++ D
Sbjct: 124 RSYTQQLISQFASDCEVKMIGSTRLVEMAEQKLRGEAISLDELSDILAPW-----QQQVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
I+L CTH+PLI + + V +D+ +IA R LL
Sbjct: 179 SIILGCTHFPLIKDEIQAVLNNDVYIVDSGKAIANRVASLLE 220
>gi|325208730|gb|ADZ04182.1| glutamate racemase [Neisseria meningitidis NZ-05/33]
Length = 270
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDDNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|271963270|ref|YP_003337466.1| glutamate racemase [Streptosporangium roseum DSM 43021]
gi|270506445|gb|ACZ84723.1| Glutamate racemase [Streptosporangium roseum DSM 43021]
Length = 276
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q SI IFDSG+GGL V + + +P YVAD PYG ++ + + ++
Sbjct: 6 QASIGIFDSGVGGLTVARAIIDQLPNESIFYVADTARQPYGPKSIAQVRAYALEVMDHLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + + VIACN+A + + R + PA ++A T++G + ++ T AT+
Sbjct: 66 E-HDVKMLVIACNSASAAVLRDARERYDVPVVEVIQPAARRAVQATRNGRVGVIGTRATI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V++ L VE +E+ + I G
Sbjct: 125 ESMAYHDAFAA-APDVMLTGVAAPRLVEFVERGET----MSEELIEVIRGYMGPVLRDGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + ++D A+ +L H
Sbjct: 180 DTLILGCTHYPLLTAPISYVAGDGVTLVSSADETAKDVYRILHDRGLAAAGGTPRHRFGA 239
Query: 253 SGKPDIAMRRLMQGFG 268
+G + + + G
Sbjct: 240 TGDTVLFEQLGRRFLG 255
>gi|323339853|ref|ZP_08080122.1| glutamate racemase [Lactobacillus ruminis ATCC 25644]
gi|323092726|gb|EFZ35329.1| glutamate racemase [Lactobacillus ruminis ATCC 25644]
Length = 259
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 6/258 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ + I IFDSG+GGL VL++ +M +I+ D PYG + + +
Sbjct: 4 EETKRPIGIFDSGMGGLTVLRECVKIMGNEDYIFYGDSFNAPYGVKSTEQVYRLSKKIVQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L K VIACNTA + LR +P + +G PA+K A + ++ + +++TP
Sbjct: 64 RFL-KQNVKAIVIACNTATSASASRLRKEYPELPIIGLEPALKPAVLHKKNSTVLVMATP 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL+ NL++ + Q I + + L VE +I E+KK + G
Sbjct: 123 LTLKEKKFENLMNRFEDQAKIIKLPAPDLVEFVERG----EIDTPELKKYLRSILNPYLG 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+P +Q+ V +D AR R LL N +
Sbjct: 179 -NIDAVVLGCTHFPFAKRAIQQIVGNDVYVVDGGAGAARELRRLLEAKNERRKENRIGKI 237
Query: 250 LFLSGKPDIAMRRLMQGF 267
FL+ PD L +
Sbjct: 238 EFLNSNPDPQEIELSKKL 255
>gi|283834735|ref|ZP_06354476.1| hypothetical protein CIT292_08958 [Citrobacter youngae ATCC 29220]
gi|291069665|gb|EFE07774.1| hypothetical protein CIT292_08958 [Citrobacter youngae ATCC 29220]
Length = 260
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 142/256 (55%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R+Y
Sbjct: 62 LALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + + + D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGETVSLEELRRILRPWL--RMSEPPDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL T ++ A ++
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDATSTDENVAFCMAMTT 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G K+
Sbjct: 239 EAEQLLPVLQRYGFKT 254
>gi|256002758|gb|ACU52624.1| glutamate racemase [Bacillus licheniformis]
Length = 250
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 7/238 (2%)
Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92
+P+ + IYV D PYG + + + L + +L+ + + VIACNTA +
Sbjct: 1 MRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIAL 60
Query: 93 DELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151
D+++ + + +G + P + A T + I ++ T T++ + + +
Sbjct: 61 DDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVE 119
Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
++ +L VE K ++ +K + D ++L CTHYP++ ++
Sbjct: 120 NLACPLLVPFVESGKFLDKTADEIVK----TSLYPLKDTSIDSLILGCTHYPILKEAIQR 175
Query: 212 LSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
V+ + + D AR +L +Q+ + DH +G D + FG
Sbjct: 176 YMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQFLTTGARDQFAKIADDWFG 233
>gi|317164818|gb|ADV08359.1| glutamate racemase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 349
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 86 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 145
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 146 -GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 204
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 205 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 260
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 261 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 319
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 320 YVSDIPLKFRTIGERFLG 337
>gi|293413408|ref|ZP_06656069.1| glutamate racemase [Escherichia coli B354]
gi|291468156|gb|EFF10654.1| glutamate racemase [Escherichia coli B354]
Length = 289
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEGVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281
>gi|127511073|ref|YP_001092270.1| glutamate racemase [Shewanella loihica PV-4]
gi|166231053|sp|A3Q963|MURI_SHELP RecName: Full=Glutamate racemase
gi|126636368|gb|ABO22011.1| glutamate racemase [Shewanella loihica PV-4]
Length = 266
Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +IL+FDSG+GGL +L +R +P ++ Y+ D+ PYG ++ L + + L S
Sbjct: 1 MSANILVFDSGVGGLSILAAVREQLPSANYCYLFDNARLPYGELDEQELIQGCVTLISQA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + Q + V+ACN+A TLI LR+ + +G VPAIK AAA +Q + +L+TP T
Sbjct: 61 VIQCQADIVVVACNSASTLILPALRACLK-VPVVGVVPAIKPAAALSQKKHLGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT +LI + S C + S L E+ + + + +
Sbjct: 120 VNRQYTQDLIDQFASDCRVDRFGSSELVYLAEDKMAQRPVDSEA----LHRILAPIKASG 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+P++ + V LD+S++IA R LL + + AL+
Sbjct: 176 LDTLILGCTHFPILREELQSYLGEGVHLLDSSNAIAARVVSLLE--PSMSGEIGKSQALY 233
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
+ +R+ + +G +S
Sbjct: 234 TTDSICEGLRKTLAAWGFRS 253
>gi|227494818|ref|ZP_03925134.1| glutamate racemase [Actinomyces coleocanis DSM 15436]
gi|226831270|gb|EEH63653.1| glutamate racemase [Actinomyces coleocanis DSM 15436]
Length = 272
Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats.
Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 14/262 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P+ +YV D PYG +++ + + ++
Sbjct: 3 NAPIGIFDSGLGGLTVARSIMDKLPQEQILYVGDTAHTPYGTKPIATVRELALNVMDELA 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAV-PAIKQAAAYTQSGLISILST 128
+ + VIACNTA + + R + + + + PA K A A T++ I +++T
Sbjct: 63 SRG-VKMLVIACNTASAAVLRDARERYEVDAGIPVVEVIQPASKAAVAATRNRKIGVIAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + V + + VE+ E+ + +
Sbjct: 122 AATVTSGAYKDAF-AVVPDLEVTQQACPRFVEFVEKGIT----TGAELNEVAREYLDPVK 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-- 246
D +VL CTHYPL+ + Q V + +S+S A L R N + V
Sbjct: 177 TAGVDTLVLGCTHYPLLTGLISQHMGERVTLISSSESAANEVYQRLVRENLTASEVDPLQ 236
Query: 247 -DHALFLSGKPDIAMRRLMQGF 267
H + +G + L + F
Sbjct: 237 VQHEFYGTGSLESFA-PLARRF 257
>gi|254805513|ref|YP_003083734.1| glutamate racemase MurI [Neisseria meningitidis alpha14]
gi|254669055|emb|CBA07540.1| glutamate racemase MurI [Neisseria meningitidis alpha14]
Length = 327
Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 123
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 124 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 183 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 238
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 239 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 298 YVSDIPLKFRTIGERFLG 315
>gi|165977281|ref|YP_001652874.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|307251416|ref|ZP_07533331.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|307262335|ref|ZP_07543983.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|226707583|sp|B0BT16|MURI_ACTPJ RecName: Full=Glutamate racemase
gi|165877382|gb|ABY70430.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|306856584|gb|EFM88725.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306867998|gb|EFM99826.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
Length = 265
Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats.
Identities = 77/261 (29%), Positives = 134/261 (51%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE ++ ++ + + I +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGQVDQERLIEVIAEW---QTHPT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKIDEEFFKREVIMQQWGFK 257
>gi|227432402|ref|ZP_03914392.1| glutamate racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
gi|227351841|gb|EEJ42077.1| glutamate racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
Length = 291
Score = 284 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSGIGGL V+++ + +P IY+ D PYG + + + ++
Sbjct: 17 NNPIGLVDSGIGGLTVVKESQKQLPNEQLIYIGDTARMPYGPRSEKEVIDYTFQMTHYLV 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA +LR + +G + P + A + +Q+ I +++T T
Sbjct: 77 NEQNIKMLVIACNTATARALSQLREQL-CIPVIGVIQPGAEAAVSISQNKKIGLIATQGT 135
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + I + + VE + DE ++ I +
Sbjct: 136 VESQVYNEKMLAIDNNVQITSQAEPEFVTLVENNL----YQSDEAREVIAHHLSAFKEAN 191
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHA 249
D ++L CTH+PL+ ++ V +D+ + L ++ H D
Sbjct: 192 IDTLILGCTHFPLLTPFIQEAVGSDVTLVDSGAKTVAVMKQYLDELDIHSEVKHNHSDDI 251
Query: 250 LFLSGKPDIAMRRLMQGF 267
+G
Sbjct: 252 YNTTGDKLKFKTIASSWL 269
>gi|322834972|ref|YP_004214999.1| glutamate racemase [Rahnella sp. Y9602]
gi|321170173|gb|ADW75872.1| glutamate racemase [Rahnella sp. Y9602]
Length = 293
Score = 284 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 81/265 (30%), Positives = 142/265 (53%), Gaps = 9/265 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R ++P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 26 RPTVLVFDSGVGGLSVYDEVRQMLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVA 85
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA T+ LR+ F S +G VPAIK AA T++G++ +L+T AT+
Sbjct: 86 KRHPLSIIVIACNTASTVSLPALRAKF-SCPVVGVVPAIKPAAKLTRNGVVGLLATRATV 144
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +L+ + + C I ++ S L E G ++ +KK + + +
Sbjct: 145 QRPYTHDLVARFATDCQILMLGSAELVELAEAKLHGEEVSLAALKKILHPWL--RLREPP 202
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL-- 250
D +VL CTH+PL+ Q+ P +D+ +IARRA L+ + D +
Sbjct: 203 DTVVLGCTHFPLLSQELSQVLPDGTRMIDSGSAIARRAHWLIETSHVPIPERKADVEIEC 262
Query: 251 --FLSGKPDIAMR--RLMQGFGLKS 271
+ A ++Q +G +S
Sbjct: 263 VAYCMAMTAEAQSLLPVLQAYGFRS 287
>gi|59713040|ref|YP_205816.1| glutamate racemase [Vibrio fischeri ES114]
gi|75431448|sp|Q5E218|MURI_VIBF1 RecName: Full=Glutamate racemase
gi|59481141|gb|AAW86928.1| glutamate racemase [Vibrio fischeri ES114]
Length = 262
Score = 284 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 84/256 (32%), Positives = 130/256 (50%), Gaps = 10/256 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSGIGGL V +++++ +P +IY D+ FPYG + L +R + S +
Sbjct: 1 MPKHILIFDSGIGGLSVYKEIKYQLPLAKYIYAFDNAAFPYGELTESVLIERTTHIISKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
K+ + VIACNTA T++ LR + +G VPAIK AA S I +L+TPAT
Sbjct: 61 CSKFPIDIVVIACNTASTVVLPSLREKL-DIPVVGVVPAIKPAALV--SNKIGLLATPAT 117
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT +LI S+ + L+ S L EE GI + E+K+ + +
Sbjct: 118 VKRSYTYDLIKSFAPISDVQLLGSTRLVEMAEEKMIGIDVDITELKEILSPW-----QNK 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D IVL CTH+P + + ++ + +D+ ++IARR + LL +F+
Sbjct: 173 VDTIVLGCTHFPFLKNEIKKALGNKILLIDSGEAIARRVKQLLNGDEVESAVLFEGEVFC 232
Query: 252 LSGKPDIAMRRLMQGF 267
P I L F
Sbjct: 233 --SAPSIKEEALNHTF 246
>gi|237703008|ref|ZP_04533489.1| glutamate racemase MurI [Escherichia sp. 3_2_53FAA]
gi|115515364|gb|ABJ03439.1| glutamate racemase MurI [Escherichia coli APEC O1]
gi|226902945|gb|EEH89204.1| glutamate racemase MurI [Escherichia sp. 3_2_53FAA]
gi|323954254|gb|EGB50039.1| glutamate racemase [Escherichia coli H263]
Length = 289
Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281
>gi|110345903|gb|ABG72140.1| glutamate racemase [Escherichia coli 536]
Length = 289
Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281
>gi|311108362|ref|YP_003981215.1| glutamate racemase [Achromobacter xylosoxidans A8]
gi|310763051|gb|ADP18500.1| glutamate racemase [Achromobacter xylosoxidans A8]
Length = 267
Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I I+DSG+GGL VL+ +R +P + +YVAD PYG +++R + +
Sbjct: 4 ESPIGIYDSGVGGLSVLRAIRDALPHEYLLYVADSAHVPYGEKTQDYVEQRASTIADYFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA +LR P + +G PAIK AA T SG++ + +T TL
Sbjct: 64 SRQAKAM-VVACNTATAAAIAQLRQRHPQLIIIGVEPAIKPAAHLTSSGVVGVFATTGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ + I VE+ E ++ + E
Sbjct: 123 ASPKFAALVQRQAPEVRILFRPCPEWVRLVEQGVLSGPEAEAAVRAPVA----ELREAGA 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV+VL CTH+P + + + V L+ +AR R L + D L
Sbjct: 179 DVLVLGCTHFPFLRDAIQAAAGPGVPLLETGAPVARWLRHQLQERGLLRADGPGDLRLET 238
Query: 253 SGKPDIAMRRLMQGFG 268
SG + + G
Sbjct: 239 SGSAEALSALAPRLLG 254
>gi|227540150|ref|ZP_03970199.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33300]
gi|227240011|gb|EEI90026.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33300]
Length = 275
Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 62/261 (23%), Positives = 103/261 (39%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG GGL V ++++ +PEY +IY+ D+ PYGN + + +
Sbjct: 8 NSPIGVFDSGYGGLSVFKEIKKELPEYDYIYLGDNARIPYGNRSFETVYQFTKECVFKLF 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
D L ++ACNTA ++ P LG + P + YT + I IL+T
Sbjct: 68 D-LGCDLVILACNTASAKALRSIQQHDLPPGKKVLGVIRPTTEIIKEYTTTNKIGILATT 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I+ + + + VE + ++K+I +
Sbjct: 127 GTVKSESYKIEINKFYPEIEVFQHDCPFWVPLVENNEIDTEGARYFVEKDIHELLS--QS 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247
D IVLACTHYPL++ V +Q P + + +A + L R
Sbjct: 185 SDIDTIVLACTHYPLLLPVIKQFVPPHIQIISQGPIVAHSLKNYLERHPEVEQNCSKGST 244
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
F + + FG
Sbjct: 245 LQFFTTDDASGFEEKAEIFFG 265
>gi|309378294|emb|CBX23082.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|325144995|gb|EGC67278.1| glutamate racemase [Neisseria meningitidis M01-240013]
Length = 270
Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|296274260|ref|YP_003656891.1| glutamate racemase [Arcobacter nitrofigilis DSM 7299]
gi|296098434|gb|ADG94384.1| glutamate racemase [Arcobacter nitrofigilis DSM 7299]
Length = 266
Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 7/255 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSGIGGL V++ + ++ Y+AD PYG + K + + ++ +
Sbjct: 3 VGVFDSGIGGLTVVKAITEVLKGAEIFYIADTKFAPYGEKSKEQILKHSFNIANYLVKTH 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + ELR FP++ +G P IK A + +++G I IL+TPATL+
Sbjct: 63 NIDALVVACNTATSAAIKELREEFPNLIVVGTEPGIKPAISLSKNGKIGILATPATLKGE 122
Query: 136 YTSNLIHSY---VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L+ S ++ + L ++E I+ ++ + ++ K
Sbjct: 123 KYQLLVDKLSNASSNITLYEQACPGLVQQIENG----DIEGEKTFEMLKNWLKPMSEKGV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D IVL CTHYPL+ +V +++ + ++ +IA R + L V + F
Sbjct: 179 DTIVLGCTHYPLVGNVIKKIMGENTNLIETGYAIANRLKDLSKNCGHFNDGVLKVNVYFT 238
Query: 253 SGKPDIAMRRLMQGF 267
S + + +++ +
Sbjct: 239 SDINETMISKILNSW 253
>gi|269955858|ref|YP_003325647.1| glutamate racemase [Xylanimonas cellulosilytica DSM 15894]
gi|269304539|gb|ACZ30089.1| glutamate racemase [Xylanimonas cellulosilytica DSM 15894]
Length = 268
Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 56/262 (21%), Positives = 99/262 (37%), Gaps = 12/262 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V + + +P +Y+ D PYG A++ + + D++
Sbjct: 3 DAPIGVFDSGVGGLTVARAILDQLPHEQVLYIGDTANAPYGPKPLAAVRAMALAVMDDLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAV-PAIKQAAAYTQSGLISILST 128
D+ L VIACN+A + + R + + + + PA ++A ++SG I ++ T
Sbjct: 63 DQG-VKLLVIACNSATAVALPDARERYEVRRGIPVVEVIRPAARRAVVTSRSGRIGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + H I + VE EI
Sbjct: 122 KATIDSRAYEDAFH-VTPGLIITTQACPEFVPLVERGITSGP----EILAAAHRYLDPVR 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FD 246
D +VL CTHYPL+ + V + +++ A+ L ++
Sbjct: 177 DAGVDTLVLGCTHYPLLAGAISYVMGEDVTLVSSAEETAKDVYRTLVASGLERSPQAGPP 236
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+H +G + G
Sbjct: 237 EHRFVSTGDTAAFEEVARRFLG 258
>gi|167038101|ref|YP_001665679.1| glutamate racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|307266301|ref|ZP_07547841.1| glutamate racemase [Thermoanaerobacter wiegelii Rt8.B1]
gi|320116507|ref|YP_004186666.1| glutamate racemase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|229486282|sp|B0KBP8|MURI_THEP3 RecName: Full=Glutamate racemase
gi|166856935|gb|ABY95343.1| glutamate racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|306918679|gb|EFN48913.1| glutamate racemase [Thermoanaerobacter wiegelii Rt8.B1]
gi|319929598|gb|ADV80283.1| glutamate racemase [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 264
Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 16/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D+ P I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK
Sbjct: 1 MDSRP--------IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + + ++ VIACNT +I +S + + F + AA YT +
Sbjct: 53 FAKQILNFMREQK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKK 108
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++T T+ I ++ + +E+ I + K
Sbjct: 109 IGVIATTRTVESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYETASK---- 164
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
C E + K D +VL CTHYPL+ V ++ V +D + +A + L + +
Sbjct: 165 CLKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNP 224
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFG 268
++ F+SG D ++ G
Sbjct: 225 QIRGKAEFFVSGDKDNFIKTAEMLLG 250
>gi|73541920|ref|YP_296440.1| glutamate racemase [Ralstonia eutropha JMP134]
gi|123624580|sp|Q46Z37|MURI_RALEJ RecName: Full=Glutamate racemase
gi|72119333|gb|AAZ61596.1| glutamate racemase [Ralstonia eutropha JMP134]
Length = 272
Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 6/254 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL+++R L+P +Y+AD PYG + ++ R + +L
Sbjct: 7 APIGVFDSGLGGLSVLREIRALLPHESLLYLADSKYAPYGEKPEAFVQARTLQACEWLLA 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA + LR T P + +G P +K AAA +QS ++ +L+T TL+
Sbjct: 67 QGCKAL-VIACNTATGHAVELLRQTLP-VPIIGVEPGLKPAAAASQSKVVGVLATANTLK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ S + + + L +E+ I +I+ ++ D
Sbjct: 125 SGKFARLLASLDGESRFICEAGLGLVPLIEQG----DIDGPDIRGRLDNYLTPMLEAGAD 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + R + + +D +IAR+ L + F+S
Sbjct: 181 TLVLGCTHYPFLSDTIRDMVGNQLTLVDTGSAIARQLARKLVEHDLAVAPGAVPQDRFVS 240
Query: 254 GKPDIAMRRLMQGF 267
K +R++
Sbjct: 241 TKDAAHLRQMAAAL 254
>gi|110807826|ref|YP_691346.1| glutamate racemase [Shigella flexneri 5 str. 8401]
gi|161367471|ref|NP_290606.2| glutamate racemase [Escherichia coli O157:H7 EDL933]
gi|161485830|ref|NP_709771.3| glutamate racemase [Shigella flexneri 2a str. 301]
gi|161486412|ref|NP_838913.2| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|161950019|ref|YP_405199.2| glutamate racemase [Shigella dysenteriae Sd197]
gi|161984807|ref|YP_410264.2| glutamate racemase [Shigella boydii Sb227]
gi|161986399|ref|YP_312888.2| glutamate racemase [Shigella sonnei Ss046]
gi|162139734|ref|NP_312925.2| glutamate racemase [Escherichia coli O157:H7 str. Sakai]
gi|254795974|ref|YP_003080811.1| glutamate racemase [Escherichia coli O157:H7 str. TW14359]
gi|261226407|ref|ZP_05940688.1| glutamate racemase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256807|ref|ZP_05949340.1| glutamate racemase [Escherichia coli O157:H7 str. FRIK966]
gi|291285389|ref|YP_003502207.1| Glutamate racemase [Escherichia coli O55:H7 str. CB9615]
gi|293417477|ref|ZP_06660101.1| glutamate racemase [Escherichia coli B185]
gi|54037865|sp|P63634|MURI_SHIFL RecName: Full=Glutamate racemase
gi|54041258|sp|P63633|MURI_ECO57 RecName: Full=Glutamate racemase
gi|123342230|sp|Q0SY24|MURI_SHIF8 RecName: Full=Glutamate racemase
gi|110617374|gb|ABF06041.1| glutamate racemase [Shigella flexneri 5 str. 8401]
gi|254595374|gb|ACT74735.1| glutamate racemase [Escherichia coli O157:H7 str. TW14359]
gi|281603361|gb|ADA76345.1| putative Glutamate racemase [Shigella flexneri 2002017]
gi|290765262|gb|ADD59223.1| Glutamate racemase [Escherichia coli O55:H7 str. CB9615]
gi|291430997|gb|EFF03993.1| glutamate racemase [Escherichia coli B185]
gi|320639143|gb|EFX08779.1| glutamate racemase [Escherichia coli O157:H7 str. G5101]
gi|320644535|gb|EFX13596.1| glutamate racemase [Escherichia coli O157:H- str. 493-89]
gi|320649859|gb|EFX18374.1| glutamate racemase [Escherichia coli O157:H- str. H 2687]
gi|320655208|gb|EFX23157.1| glutamate racemase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320660833|gb|EFX28283.1| glutamate racemase [Escherichia coli O55:H7 str. USDA 5905]
gi|320665951|gb|EFX32977.1| glutamate racemase [Escherichia coli O157:H7 str. LSU-61]
Length = 285
Score = 284 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277
>gi|215489308|ref|YP_002331739.1| glutamate racemase [Escherichia coli O127:H6 str. E2348/69]
gi|215267380|emb|CAS11831.1| glutamate racemase MurI [Escherichia coli O127:H6 str. E2348/69]
Length = 285
Score = 284 bits (729), Expect = 8e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277
>gi|218701323|ref|YP_002408952.1| glutamate racemase [Escherichia coli IAI39]
gi|226722984|sp|B7NU33|MURI_ECO7I RecName: Full=Glutamate racemase
gi|218371309|emb|CAR19141.1| glutamate racemase [Escherichia coli IAI39]
Length = 285
Score = 284 bits (729), Expect = 8e-75, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQKRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277
>gi|237747808|ref|ZP_04578288.1| glutamate racemase [Oxalobacter formigenes OXCC13]
gi|229379170|gb|EEO29261.1| glutamate racemase [Oxalobacter formigenes OXCC13]
Length = 283
Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 16/266 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I IFDSG+GGL VL+ + +P+ +Y AD PYG+ + + +R FL +D
Sbjct: 13 KASGPIGIFDSGVGGLSVLRHIATQLPDEELVYFADSGYAPYGDKPEEFVVERS-FLITD 71
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K V+ACNTA + LR +P + +G P +K AAA T +G + +++T
Sbjct: 72 FLLKQDIKALVVACNTATAMAIHLLREKYPDLPIVGVEPGLKPAAAKTITGTVGVMATER 131
Query: 131 TLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL L Q H + + +A +E ++ + I + ++ +
Sbjct: 132 TLASNKFHVLHQLLNDQTGVHFIMQACNGMADLIEH----AELDSEPIFELVQRYLLPLL 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPW----PVDWLDNSDSIARRARCLLPRINTHQTRV 244
++ D IVL CTHYP + HV +++ ++ +D ++AR+ + LL ++
Sbjct: 188 EQKADTIVLGCTHYPFVRHVIEKVAADYGSTQLNIIDTGYAVARQLKHLLDIYGLNKNGC 247
Query: 245 FDDH--ALFLSGKPDI---AMRRLMQ 265
D + SG P + RL+Q
Sbjct: 248 SPDSLVRAYTSGDPATISHLISRLLQ 273
>gi|126436408|ref|YP_001072099.1| glutamate racemase [Mycobacterium sp. JLS]
gi|126236208|gb|ABN99608.1| glutamate racemase [Mycobacterium sp. JLS]
Length = 280
Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 13/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL V + + +P+ +YV D PYG ++ + + D++++
Sbjct: 11 PVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDDLVER 70
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + + R + ++ + + PA+++A A T++G I ++ T AT+
Sbjct: 71 GVKAL-VIACNTASSACLRDARERYAPVSVVEVILPAVRRAVATTRNGRIGVIGTAATIA 129
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V+ VE + ++ EG + D
Sbjct: 130 SGAYQDAFAA-ARDIEVIGVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRADVD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---- 249
+VL CTHYP++ + + V + +++ A+ +L ++ + D A
Sbjct: 185 TLVLGCTHYPMLSGLIQLAMGDQVTLVSSAEETAKDLLRVLTELDLLRPHPADPGATPAT 244
Query: 250 --LFLSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 245 RVFESTGDPEAFATLATRFLG 265
>gi|194335598|ref|YP_002017392.1| glutamate racemase [Pelodictyon phaeoclathratiforme BU-1]
gi|194308075|gb|ACF42775.1| glutamate racemase [Pelodictyon phaeoclathratiforme BU-1]
Length = 273
Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 61/250 (24%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSGIGGL V++ ++ +P +Y D PYG ++K + +L
Sbjct: 10 EAPIGIFDSGIGGLTVVKAVQAALPFERILYFGDTARVPYGPKSQVTIRKYAAD-DTAML 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+YQP + ++ACNT L D ++ + + G + A + A T++ I ++ T AT
Sbjct: 69 MRYQPKIIIVACNTVSALALDVVQKSCGVIPVTGVLRAGARLATEVTRNNRIGVIGTRAT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I+ + S+ + + + EE I + E E +
Sbjct: 129 VSSNAYGIAINEFNSEIEVVSRACPLFVPLAEEGF----IDHLATRLIAEEYLAEITREG 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTHYP++ V ++ + +D+++++A R R LL + + L
Sbjct: 185 IDTLVLGCTHYPILRKVIEEIVGPEIRIIDSAEAVALRTRELLEESGHLSSSLKVSAPHL 244
Query: 251 FLSGKPDIAM 260
+S P
Sbjct: 245 LVSDLPQKFS 254
>gi|261363930|ref|ZP_05976813.1| glutamate racemase [Neisseria mucosa ATCC 25996]
gi|288567943|gb|EFC89503.1| glutamate racemase [Neisseria mucosa ATCC 25996]
Length = 269
Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 111/263 (42%), Gaps = 8/263 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M +
Sbjct: 1 MTTSKQRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISIL 126
+L+ VIACNT + ++R +M L + A QAA T++ I I+
Sbjct: 61 VDFLLE-NDVKALVIACNTIAAVAGQKIRQKAGNMPVLDVISAGAQAALNTTRNNKIGII 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ + IH+ + ++ +L VEE ++ +++ ++ ++
Sbjct: 120 ATNTTVNSNAYARAIHAQNPDTLVRTQATPLLVPLVEEGWLDHEVTRLTVREYLKPLLVD 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-F 245
D +VL CTH+PL+ + + + V +D++ + A L + T
Sbjct: 180 ----DIDTLVLGCTHFPLLKPLIGKEA-QNVALVDSAITTAEATAQALAQAGLLNTENDS 234
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
D+ ++S P + G
Sbjct: 235 PDYRFYVSDIPLRFRTIGERFLG 257
>gi|317969725|ref|ZP_07971115.1| glutamate racemase [Synechococcus sp. CB0205]
Length = 278
Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 7/260 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL + +++ +P +YVAD PYG+ ++ + + ++
Sbjct: 4 APIGLFDSGVGGLSIWRQVVHALPSESLLYVADQANVPYGHRSADEIQANSLGIADYLVA 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + + LR FP + LG PA+K A T+SG++ +++TPAT +
Sbjct: 64 QG-CKAIVLACNTASAVALEPLRQRFPQLPILGLEPAVKPAVQLTRSGVVGVMATPATFQ 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ Y + + + LA VE+ + + G D
Sbjct: 123 GQLYRATVGRYATAVQVVEQVCVGLAELVEQGDLEGPDCD----ARLMGYLQPMLDAGAD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LF 251
IVL CTHYP ++ R+L + LD + ++AR +L + A
Sbjct: 179 TIVLGCTHYPFVIESIRRLVGPAMAVLDPAPAVARHLADVLRQAELLAMDSAGVLAPRFA 238
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
+ P R L + G+ S
Sbjct: 239 TTADPLAFNRALSRLVGVSS 258
>gi|269122263|ref|YP_003310440.1| glutamate racemase [Sebaldella termitidis ATCC 33386]
gi|268616141|gb|ACZ10509.1| glutamate racemase [Sebaldella termitidis ATCC 33386]
Length = 258
Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 10/241 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI IFDSG+GGL VL+++R + P Y D PYG + + + +L K
Sbjct: 2 SIGIFDSGLGGLTVLKEVRKIFPNEEIFYFGDTARVPYGEKTKELIIRYSKEITDFLLTK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA L +EL++ + + +G + A ++ A + T++ I ++ T AT+
Sbjct: 62 -NINVLVVACNTATALALEELKAVY-DIPVIGVIEAGVRSALSVTKTNEIGVIGTKATIN 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
IH ++ + + VEE +I E IK + + D
Sbjct: 120 SEKYKQEIHRRNKDIVVYQKACPLFVHVVEEGLLDGEIIESIIKHYLGDF-----DDKVD 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYPL+ +++ P ++ +D + A + +L N + + ++S
Sbjct: 175 TLILGCTHYPLLKKEIQKIYP-DLNLIDPAMETALDLKKVLTENNAAENK-GGHVKFYVS 232
Query: 254 G 254
Sbjct: 233 D 233
>gi|117926510|ref|YP_867127.1| glutamate racemase [Magnetococcus sp. MC-1]
gi|117610266|gb|ABK45721.1| glutamate racemase [Magnetococcus sp. MC-1]
Length = 272
Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 6/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+ + P+ FIY+ D PYG +++ + + L
Sbjct: 9 RPIGIFDSGVGGLTVLRTLARRFPQESFIYLGDTARVPYGTKSPRTVERYTLQVADH-LQ 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
++ V ACNTA L LR+ P + G + P + A TQ+G + ++ T AT+
Sbjct: 68 RHGVKGVVAACNTASALGLGALRAHQPKLPVQGVIVPGCRSALNVTQTGRVGVIGTRATI 127
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + ++ + EE E +++ +
Sbjct: 128 SSGAYRTTLNLLNPTIEVSDIACPLFVPLAEEGWTHHAATEMIVRETLTPLL----DSDI 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP++ V +++ V +D+++++A L + L+L
Sbjct: 184 DTLILGCTHYPVLKEVIQKVMGEGVMLVDSAEAVADELEQRLSDTILPNHSGAERTILYL 243
Query: 253 SGKPDIAMRRLMQGF 267
+ + F
Sbjct: 244 VTDEAARFASVARRF 258
>gi|170017584|ref|YP_001728503.1| glutamate racemase [Leuconostoc citreum KM20]
gi|169804441|gb|ACA83059.1| Glutamate racemase [Leuconostoc citreum KM20]
Length = 289
Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 101/263 (38%), Gaps = 8/263 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I DSG+GGL V+++ + +P FI++ D PYG + + + +
Sbjct: 2 NKNNPIGFVDSGVGGLTVIKEAQKQLPNEQFIFIGDTARMPYGPRPTEEVVRYTFQMANY 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
++++ L VIACNTA + +L+ T ++ +G + P A T++ I I++T
Sbjct: 62 LVEQKHIKLLVIACNTATARVLSQLQRTL-AIPVIGVIQPGAWAATKTTKNNRIGIIATQ 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ N IH++ I + VE K E + + +
Sbjct: 121 GTVDSGAYDNEIHAFRDDVQITSQAEPEFVQLVESN----KYHEAATRNIVSQHLEHMKS 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDD 247
+ D ++L CTH+PL+ V +D R + L + + +
Sbjct: 177 QDVDTLILGCTHFPLLATFIEAAMGPQVTLIDAGRETVRVIQEALLMHDLYTSVAHSHSK 236
Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270
+ +G L
Sbjct: 237 DIYYTTGNTANFRIIATDWLDLP 259
>gi|117928893|ref|YP_873444.1| glutamate racemase [Acidothermus cellulolyticus 11B]
gi|166231023|sp|A0LVJ8|MURI_ACIC1 RecName: Full=Glutamate racemase
gi|117649356|gb|ABK53458.1| glutamate racemase [Acidothermus cellulolyticus 11B]
Length = 263
Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V + + L+P YVAD FPYG +++ + + ++
Sbjct: 3 NLPIGVFDSGVGGLTVARAILDLLPHEPLYYVADTAHFPYGTKSIAEVRQYGLAVLDRMV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACN+A + + + R + PA+++A + T++G + ++ TPAT+
Sbjct: 63 A-DGVKLLVIACNSASSALLRDARERYDVPVVEVIQPAVRKAVSATRNGKVGVIGTPATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + VE DE+ + + +
Sbjct: 122 ASMAYDDAFAA-APHVDLTTAACPRFVEFVEAGIT----MSDELLECAKEYLAPIVERGC 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHAL 250
D ++L CTHYP + + V + ++D AR +L + H
Sbjct: 177 DTLILGCTHYPFLAGAIALVVGDEVMLVSSADETARDVYRVLVSRGLTRPASAPPPVHRF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 237 AATGDPEPFSRLGRRFLG 254
>gi|78188551|ref|YP_378889.1| glutamate racemase [Chlorobium chlorochromatii CaD3]
gi|78170750|gb|ABB27846.1| glutamate racemase [Chlorobium chlorochromatii CaD3]
Length = 267
Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats.
Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+N I IFDSGIGGL V++ ++ +P IY D PYG ++K S
Sbjct: 2 NTENPIGIFDSGIGGLTVVKAIQAALPSERIIYFGDTARVPYGPKSQVTIRKYAAD-DSA 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129
IL +YQP L ++ACNT L D + S+ LG + A A +++G I ++ T
Sbjct: 61 ILMRYQPKLIIVACNTVSALALDVVEKCCGSVPVLGVLKAGASLAVQASRNGRIGVIGTQ 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + I+ + + + EE I+ D E
Sbjct: 121 ATVCSNAYACAINQQAPDYEVTSKACPLFVPLAEEGF----IEHDATALIAEHYLAPLRT 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
D +VL CTHYP++ +V + + +D+++++A +A +L N
Sbjct: 177 HNIDTLVLGCTHYPILRNVIERTIGSNIRIIDSAEAVALQAGEMLRERNLLNQSPDKKTP 236
Query: 249 ALFLSGKPDIAMRRLMQGF 267
L +S P L Q F
Sbjct: 237 HLLVSDLPQKFST-LYQLF 254
>gi|254422538|ref|ZP_05036256.1| glutamate racemase [Synechococcus sp. PCC 7335]
gi|196190027|gb|EDX84991.1| glutamate racemase [Synechococcus sp. PCC 7335]
Length = 307
Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 13/275 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M I + + I +FDSG+GGL VL++MR +P IY D PYGN +
Sbjct: 1 MSIPALSSKLRSNFKIGVFDSGVGGLTVLREMRSHLPAESIIYFGDTARVPYGNRSKSEI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
+ + + + ++ + + L V+ACNT+ L+ +E+RS FP + LG V P + A
Sbjct: 61 LRFVREIIAWMI-RLEVKLIVMACNTSSALVLEEVRSEFP-IPILGIVLPGARGAVKT-- 116
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
I ++ST AT + + S + V +E K+
Sbjct: 117 GKRIGVVSTEATAKSDAYLQAVQEIDSTIRVWQVGCPEFVPLIESGRSYDPYTLTVAKRY 176
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+E D +V CTHYP + VF+Q+ P + +D + ++ A L +
Sbjct: 177 LE----PLIAAGIDTLVYGCTHYPHLAPVFKQILPTRIKLVDPAKHLSVAAAQELEILGL 232
Query: 240 HQTRVFD----DHALFLSGKPDIAMRRLMQGFGLK 270
+ + ++SG P + Q G +
Sbjct: 233 CNSNAVETGATPTEFYVSGDPLKFAKVSQQWLGYR 267
>gi|83748331|ref|ZP_00945355.1| Glutamate racemase [Ralstonia solanacearum UW551]
gi|207723937|ref|YP_002254335.1| glutamate racemase protein [Ralstonia solanacearum MolK2]
gi|83724953|gb|EAP72107.1| Glutamate racemase [Ralstonia solanacearum UW551]
gi|206589144|emb|CAQ36106.1| glutamate racemase protein [Ralstonia solanacearum MolK2]
Length = 277
Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 6/248 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 1 MTARAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRV 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++ VIACNTA LR ++ +G P +K A A +QS ++ +L+
Sbjct: 61 CEWLV-GQGCKALVIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T +TLR + L+ + C + L +E + + ++
Sbjct: 119 TESTLRSDKFARLLGNVSGDCQVLCQPGYGLVPLIERG----DTHSPAVLELLQAYLQPM 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTHYP + ++++ + +D ++AR L +
Sbjct: 175 LDAGADTLVLGCTHYPFLRDAIQEIAGERLALIDTGHAVARHLGRTLAAAHLQAAGAAAS 234
Query: 248 HALFLSGK 255
+G
Sbjct: 235 PRFLSTGD 242
>gi|237715314|ref|ZP_04545795.1| glutamate racemase [Bacteroides sp. D1]
gi|262405155|ref|ZP_06081705.1| glutamate racemase [Bacteroides sp. 2_1_22]
gi|294643545|ref|ZP_06721351.1| glutamate racemase [Bacteroides ovatus SD CC 2a]
gi|294807052|ref|ZP_06765871.1| glutamate racemase [Bacteroides xylanisolvens SD CC 1b]
gi|229444623|gb|EEO50414.1| glutamate racemase [Bacteroides sp. D1]
gi|262356030|gb|EEZ05120.1| glutamate racemase [Bacteroides sp. 2_1_22]
gi|292641120|gb|EFF59332.1| glutamate racemase [Bacteroides ovatus SD CC 2a]
gi|294445751|gb|EFG14399.1| glutamate racemase [Bacteroides xylanisolvens SD CC 1b]
Length = 280
Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P+ LG + P ++ +++ I +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + + + + S VE + + I+K I+
Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + +
Sbjct: 247 GNCQFYTTEAEEKFSE 262
>gi|163815643|ref|ZP_02207016.1| hypothetical protein COPEUT_01818 [Coprococcus eutactus ATCC 27759]
gi|158449280|gb|EDP26275.1| hypothetical protein COPEUT_01818 [Coprococcus eutactus ATCC 27759]
Length = 255
Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 5/250 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
SI +FDSG+GG+ VL+ + LMP ++IY D PYG A+ +R + +L
Sbjct: 4 RSIGVFDSGLGGISVLRDIVELMPYENYIYFGDSAHAPYGTKTREAILERSEQCTNFLLA 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K VIACNTA ++ LR +PS+ +G PA+K A + + +++++TPATL
Sbjct: 64 K-DVKAIVIACNTATSVAASTLRQQYPSIPIIGIEPALKPAVLWKEHDKVAVMATPATLA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ Y + I+ + LA VE +EI + + K+ D
Sbjct: 123 LPKFHELMKHYSKESDIYPIPCPGLADYVERGI----FDGEEITEFLRELLAPYLAKKID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTHYP + V ++++ V + + A + L + F S
Sbjct: 179 AIVLGCTHYPFVEKVIKRIAGPDVKIFNGAHGTALELQRRLRIAELLTPSIEKGSVEFYS 238
Query: 254 GKPDIAMRRL 263
+ +L
Sbjct: 239 SSTNPKTIKL 248
>gi|304570642|ref|YP_832062.2| glutamate racemase [Arthrobacter sp. FB24]
Length = 351
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 12/268 (4%)
Query: 7 PCEKKL-QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P + + I IFDSG+GGL V + + +P +YV D PYG ++ +
Sbjct: 35 PDDSPMGSRPIGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANAL 94
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSG 121
+ +++D L IACN+A + + R + + + + PA+++A A T+SG
Sbjct: 95 GVMDELVDSG-VKLLTIACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVAATRSG 153
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ T AT+ + + HI V+ S VE E+
Sbjct: 154 RVGVIGTSATIGSRAYEDTFAA-APDLHITSVACPAFVSYVEAGIT----TGPELLAVAR 208
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
D +VL CTHYPL+ V + V + +++ A+ L + +
Sbjct: 209 EYLEPLRTAGVDTVVLGCTHYPLLTGVISYVMGEDVTLVSSAEETAKDVYRALVSHDLQR 268
Query: 242 T-RVFDDHALFLSGKPDIAMRRLMQGFG 268
T +H +G+ + G
Sbjct: 269 TLEAPPEHHFIATGEAGQFETLARRFLG 296
>gi|295093321|emb|CBK82412.1| glutamate racemase [Coprococcus sp. ART55/1]
Length = 255
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 5/250 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
SI +FDSG+GG+ VL+ + LMP ++IY D PYG A+ +R + +L
Sbjct: 4 RSIGVFDSGLGGISVLRDIVELMPCENYIYFGDSAHAPYGTKTREAILERSEQCTNFLLA 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K VIACNTA ++ LR +PS+ +G PA+K A + + +++++TPATL
Sbjct: 64 K-DVKAIVIACNTATSVAASTLRQQYPSIPIIGIEPALKPAVLWKEHDKVAVMATPATLA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ Y + I+ V LA VE+ +EI + ++G K D
Sbjct: 123 LPKFHELMKHYSKESDIYPVPCPGLADYVEKGI----FDGEEITEFLKGLLAPSLEKHVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTHYP + V ++++ V + + A + L + F S
Sbjct: 179 AIVLGCTHYPFVEKVIQRIAGPDVKIFNGAHGTALELQRRLRIAELLTPSIEKGTVEFYS 238
Query: 254 GKPDIAMRRL 263
+ +L
Sbjct: 239 SSTNPETIKL 248
>gi|212703906|ref|ZP_03312034.1| hypothetical protein DESPIG_01959 [Desulfovibrio piger ATCC 29098]
gi|212672609|gb|EEB33092.1| hypothetical protein DESPIG_01959 [Desulfovibrio piger ATCC 29098]
Length = 276
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 2/242 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ + +P + +Y+ D PYG + + + ++D+
Sbjct: 8 PIGIFDSGMGGLTVLKAISGRLPGENLLYLGDTARLPYGTKSRDTIIRYTLKAAGRLVDE 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + ELR F + LG V P + A A +++ I +++T AT+
Sbjct: 68 G-VKMLVVACNTATSAALPELREHFAPLPVLGVVRPGAEAAVAASRNKRIVVIATEATIA 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + + + EE I E + + F + R D
Sbjct: 127 GGAYQQAIASLCPEARVQGRACTLFVPLAEEGWMDGPIVEGIASRYLGDLFSPERPDRPD 186
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+PL R + V +D++++ A L ++ + F++
Sbjct: 187 TLVLGCTHFPLFREALRHVVGEDVRIVDSAETAAVAVEDRLRELDLLRREDAPGTHRFMT 246
Query: 254 GK 255
Sbjct: 247 TD 248
>gi|256750841|ref|ZP_05491725.1| glutamate racemase [Thermoanaerobacter ethanolicus CCSD1]
gi|256750176|gb|EEU63196.1| glutamate racemase [Thermoanaerobacter ethanolicus CCSD1]
Length = 264
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 16/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D+ P I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK
Sbjct: 1 MDSRP--------IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + + ++ VIACNT +I +S + + F + A YT +
Sbjct: 53 FAKQILNFMREQK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAVLYTINKK 108
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++T T+ I ++ + +E+ I + K
Sbjct: 109 IGVIATTRTVESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYETASK---- 164
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
C E + K D +VL CTHYPL+ V ++ V +D + +A + L + +
Sbjct: 165 CLKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNP 224
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFG 268
++ F+SG D ++ G
Sbjct: 225 QIRGKAEFFVSGDKDNFIKTAEMLLG 250
>gi|253571293|ref|ZP_04848700.1| glutamate racemase [Bacteroides sp. 1_1_6]
gi|251839246|gb|EES67330.1| glutamate racemase [Bacteroides sp. 1_1_6]
Length = 280
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 106/256 (41%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILNKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P LG + P ++ TQS I +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGDITQSRHIGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + ++ + VE + + I+K I+
Sbjct: 129 TAGTIKSESYPLEIHKLFPDIQVSGIACPMWVPLVENNESQNEGADYFIRKYIDQLLS-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ D ++L CTHYP+++ ++ +P + + + +A + L R +
Sbjct: 187 KDPEIDTMILGCTHYPILLPKIQKYTPKHIRIVAQGEYVAESLKDYLSRHPEMNAKCTQN 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + +
Sbjct: 247 GSCLFYTTEAEEKFVE 262
>gi|194099309|ref|YP_002002407.1| glutamate racemase [Neisseria gonorrhoeae NCCP11945]
gi|193934599|gb|ACF30423.1| glutamate racemase [Neisseria gonorrhoeae NCCP11945]
Length = 326
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 122
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 123 -GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 182 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 237
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 238 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 296
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 297 YVSDIPLKFRTIGERFLG 314
>gi|298386827|ref|ZP_06996382.1| glutamate racemase [Bacteroides sp. 1_1_14]
gi|298260501|gb|EFI03370.1| glutamate racemase [Bacteroides sp. 1_1_14]
Length = 280
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILNKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P LG + P ++ TQS I +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGDITQSRHIGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + ++ + VE + + I+K I+
Sbjct: 129 TAGTIKSESYPLEIHKLFPDIQVSGIACPMWVPLVENNESQNEGADYFIRKYIDQLLS-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D ++L CTHYP+++ ++ +P + + + +A + L R + +
Sbjct: 187 KDPEIDTMILGCTHYPILLPKIQEYTPKHIRIVAQGEYVAESLKDYLSRHPEMNAKCTKN 246
Query: 248 HA--LFLSGKPDIAMR 261
+ + + + +
Sbjct: 247 GSCLFYTTEAEEKFVE 262
>gi|162138273|ref|YP_672041.2| glutamate racemase [Escherichia coli 536]
gi|306813762|ref|ZP_07447938.1| glutamate racemase [Escherichia coli NC101]
gi|331649824|ref|ZP_08350904.1| glutamate racemase [Escherichia coli M605]
gi|281181040|dbj|BAI57370.1| glutamate racemase [Escherichia coli SE15]
gi|305852760|gb|EFM53207.1| glutamate racemase [Escherichia coli NC101]
gi|331041457|gb|EGI13607.1| glutamate racemase [Escherichia coli M605]
Length = 285
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277
>gi|91213519|ref|YP_543505.1| glutamate racemase [Escherichia coli UTI89]
gi|162317562|ref|YP_859563.2| glutamate racemase [Escherichia coli APEC O1]
gi|218561042|ref|YP_002393955.1| glutamate racemase [Escherichia coli S88]
gi|122421619|sp|Q1R3U0|MURI_ECOUT RecName: Full=Glutamate racemase
gi|226722983|sp|B7MIA7|MURI_ECO45 RecName: Full=Glutamate racemase
gi|91075093|gb|ABE09974.1| glutamate racemase [Escherichia coli UTI89]
gi|218367811|emb|CAR05605.1| glutamate racemase [Escherichia coli S88]
gi|294491460|gb|ADE90216.1| glutamate racemase [Escherichia coli IHE3034]
gi|307629048|gb|ADN73352.1| glutamate racemase [Escherichia coli UM146]
gi|323949465|gb|EGB45354.1| glutamate racemase [Escherichia coli H252]
Length = 285
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277
>gi|291043190|ref|ZP_06568913.1| glutamate racemase [Neisseria gonorrhoeae DGI2]
gi|291012796|gb|EFE04779.1| glutamate racemase [Neisseria gonorrhoeae DGI2]
Length = 285
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 12/269 (4%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
K++N Q I +FDSGIGGL ++ + +P + IY D PYG ++
Sbjct: 15 KMEN----IGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIE 70
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQS 120
M + +L + VIACNT + ++R +M L + A K A A T++
Sbjct: 71 NFSMQIVDFLL-GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRN 129
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I I++T T+ + IH + ++ +L VEE ++ + + +
Sbjct: 130 NKIGIIATNTTVNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYL 189
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ + + + V +D++ + A +L +
Sbjct: 190 KPLLAD----GIDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLL 244
Query: 241 QT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
T D+ ++S P + G
Sbjct: 245 DTGNNNPDYRFYVSDIPLKFRTIGERFLG 273
>gi|330717928|ref|ZP_08312528.1| glutamate racemase [Leuconostoc fallax KCTC 3537]
Length = 277
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 96/258 (37%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSGIGGL V+++ +P IY+ D PYG + + ++
Sbjct: 4 NKPIGMVDSGIGGLTVVKESLEKLPNEQIIYIGDTARMPYGPRTPEEVIAFTKQMADFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
L VIACNTA L+ P + +G + +A T + I I++T T
Sbjct: 64 ATKDIKLLVIACNTATASALIPLQEMLP-IPVIGVINSGASRAVQATHNQKIGIIATEGT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ ++ I + Q + + VE+ + + + ++K ++ +
Sbjct: 123 IASQIYTHKIRALNQQIEVFSQAEPDFVKLVEDNQYRLPVAQHQVKAHLQS----LKQAN 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
D ++L CTH+PL+ + V +D L + Q R H
Sbjct: 179 IDTLILGCTHFPLLRPFIVEAFGELDVTLIDAGAVTVDTVDDYLKAHDLSAQKRTRPHHT 238
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ +G R Q
Sbjct: 239 YYTTGDVQQFDRIASQWL 256
>gi|293398523|ref|ZP_06642701.1| glutamate racemase [Neisseria gonorrhoeae F62]
gi|291610994|gb|EFF40091.1| glutamate racemase [Neisseria gonorrhoeae F62]
Length = 326
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 122
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 123 -GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 182 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 237
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 238 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 296
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 297 YVSDIPLKFRTIGERFLG 314
>gi|331660531|ref|ZP_08361465.1| glutamate racemase [Escherichia coli TA206]
gi|331052480|gb|EGI24517.1| glutamate racemase [Escherichia coli TA206]
Length = 289
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 86/272 (31%), Positives = 147/272 (54%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+S +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSSAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 250 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 281
>gi|298345217|ref|YP_003717904.1| glutamate racemase [Mobiluncus curtisii ATCC 43063]
gi|298235278|gb|ADI66410.1| glutamate racemase [Mobiluncus curtisii ATCC 43063]
Length = 269
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 61/264 (23%), Positives = 104/264 (39%), Gaps = 14/264 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P IY+ D PYG +K+ + + ++
Sbjct: 3 NAPIGIFDSGLGGLTVARSIIDQLPGESVIYIGDTANSPYGTKPVERVKELSLSVMDKLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
D+ + VIACNTA RS + + L + PA+ +A + T++G I +++T
Sbjct: 63 DRG-VKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIATH 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ +H+Y Q + + VE E+
Sbjct: 122 TTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSGP----ELLAVAREYLEPIRD 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR----INTHQTRV 244
D +VL CTHYPL+ + + V + +++ A R LL + + V
Sbjct: 177 AGVDTLVLGCTHYPLLSGIISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGTDTV 236
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
+ +G R + G
Sbjct: 237 NPRYQFLATGDTQTFTRLARRFLG 260
>gi|254039229|ref|ZP_04873279.1| glutamate synthase [Escherichia sp. 1_1_43]
gi|331644705|ref|ZP_08345824.1| glutamate racemase [Escherichia coli H736]
gi|42876|emb|CAA23637.1| unnamed protein product [Escherichia coli]
gi|42878|emb|CAA23638.1| unnamed protein product [Escherichia coli]
gi|290428|gb|AAA23677.1| glutamate synthase [Escherichia coli]
gi|396314|gb|AAC43073.1| glutamate synthase [Escherichia coli str. K-12 substr. MG1655]
gi|226838665|gb|EEH70694.1| glutamate synthase [Escherichia sp. 1_1_43]
gi|323934456|gb|EGB30869.1| glutamate racemase [Escherichia coli E1520]
gi|323939048|gb|EGB35266.1| glutamate racemase [Escherichia coli E482]
gi|323969719|gb|EGB65003.1| glutamate racemase [Escherichia coli TA007]
gi|331036167|gb|EGI08403.1| glutamate racemase [Escherichia coli H736]
Length = 289
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 13 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 72
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 73 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 131
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 132 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 192 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 249
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P + ++Q +G ++
Sbjct: 250 AKSADANIAFCMAMTPGAEQLLPVLQRYGFET 281
>gi|88856297|ref|ZP_01130956.1| glutamate racemase [marine actinobacterium PHSC20C1]
gi|88814381|gb|EAR24244.1| glutamate racemase [marine actinobacterium PHSC20C1]
Length = 288
Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 101/272 (37%), Gaps = 11/272 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M+ I +FDSG+GGL V + + +P +YV D + PYG +
Sbjct: 1 MRASTTTIGDVTDAPIGVFDSGVGGLTVARAIIDQLPHESIVYVGDTLHSPYGPKPIADV 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAA 116
++ + + ++D L VIACNTA + + R + + + + PA + A
Sbjct: 61 RRYALEVMDRLVD-DGVKLLVIACNTASAAMLRDARERYTEAYGIEVVEVIQPATRAAVR 119
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T++ + ++ T T++ + + S + + VE E+
Sbjct: 120 QTRNRRVGVIGTEGTIKSRAYEDAFAA-ASDIELFTQACPRFVEFVEAGVT----TGPEV 174
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
E + D +VL CTHYP I + + V + +++ A L
Sbjct: 175 LAVAEEYLAPLKKAEIDTLVLGCTHYPHISAAIQYVMGREVTLVSSAEETAYDVYSTLVA 234
Query: 237 INTHQTRVFD-DHALFLSGKPDIAMRRLMQGF 267
+ + +H +G RL F
Sbjct: 235 HDLLRDPSQPANHTFEATGPDKHGFTRLASRF 266
>gi|300172982|ref|YP_003772148.1| glutamate racemase/Nucleoside-triphosphatase [Leuconostoc
gasicomitatum LMG 18811]
gi|299887361|emb|CBL91329.1| Glutamate racemase/Nucleoside-triphosphatase [Leuconostoc
gasicomitatum LMG 18811]
Length = 486
Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 8/250 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL V+++ + +P FI++ D PYG + + +
Sbjct: 2 NKNNPIGMIDSGVGGLTVIKEAQKQLPNEQFIFIGDTARMPYGPRTTDEVIAYTFQMANY 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
++ + Q + VIACNTA L+ ++ +G + P + A T++ I I++T
Sbjct: 62 LITEKQIKMLVIACNTATACALTVLQKKL-TIPVIGVIQPGAQAAQLATKNKTIGIIATD 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ IH Y + + VE K ++ + + +
Sbjct: 121 GTVNSKAYELQIHQYGADTKVLSQGEPDFVQLVEAN----KYQDHATRDIVMNHLAPFKA 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDD 247
D ++L CTH+PL+ R+ + +D+ + L ++ + D+
Sbjct: 177 AGIDTLILGCTHFPLLEPFIREAVGKQITLIDSGRETIYAIKQCLNKLALNSDIKHNHDE 236
Query: 248 HALFLSGKPD 257
+ + D
Sbjct: 237 DIYYTTSDSD 246
>gi|324111408|gb|EGC05389.1| glutamate racemase [Escherichia fergusonii B253]
Length = 285
Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKNEDFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A + P+ + ++Q +G K+
Sbjct: 246 AKSADANIAFCMDMTPEAEQLLPVLQRYGFKT 277
>gi|218551040|ref|YP_002384831.1| glutamate racemase [Escherichia fergusonii ATCC 35469]
gi|226722986|sp|B7LUM6|MURI_ESCF3 RecName: Full=Glutamate racemase
gi|218358581|emb|CAQ91229.1| glutamate racemase [Escherichia fergusonii ATCC 35469]
Length = 285
Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKNEDFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F + +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A + P+ + ++Q +G K+
Sbjct: 246 AKSADANIAFCMDMTPEAEQLLPVLQRYGFKT 277
>gi|119961466|ref|YP_948293.1| glutamate racemase [Arthrobacter aurescens TC1]
gi|119948325|gb|ABM07236.1| glutamate racemase [Arthrobacter aurescens TC1]
Length = 373
Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 11/260 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P +YV D PYG ++ + + +++D
Sbjct: 57 RPIGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDELVD 116
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L IACN+A + + R + + + + PA+++A + T+SG I ++ T
Sbjct: 117 SG-VKLLTIACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVSATRSGKIGVIGTS 175
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + + I V+ + VE ++ +
Sbjct: 176 ATVGSRAYEDTFAA-APDLTITSVACPAFVNFVEAGIT----TGPDLLAAANEYLEPLKS 230
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
D +VL CTHYPL+ V + V + +++ A+ L +T H
Sbjct: 231 AGVDTVVLGCTHYPLLTGVISFVMGEDVTLVSSAEETAKDVYRALANHGIQRTEAQAPSH 290
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+G + G
Sbjct: 291 EFVATGDATQFETLARRFLG 310
>gi|311743615|ref|ZP_07717421.1| glutamate racemase [Aeromicrobium marinum DSM 15272]
gi|311312745|gb|EFQ82656.1| glutamate racemase [Aeromicrobium marinum DSM 15272]
Length = 272
Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V + + +P +Y+ D PYG +++ + ++
Sbjct: 3 DAPIGIFDSGFGGLTVARAVLDQLPHESVLYLGDTARQPYGPLPISQVREYALDCLDHLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D + VIACN+A + + R + VPA ++A T++G + ++ T +T
Sbjct: 63 D-HGVKALVIACNSASAAVLRDARERYAVPVVEVIVPATRRAVNATRNGRVGVICTQSTA 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + +H + VE G +E+ +
Sbjct: 122 TSRAYDDAFAA-NPSIELHTRACPRFVEFVEAGVTGG----EELITVAREYLAPLKEAGV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D +VL CTHYPL+ V + V + +++ A+ LL R + + H
Sbjct: 177 DTLVLGCTHYPLLTGVVSYVMGDTVTLVSSAEETAKDVFALLAREDLARGPGASAPRHRF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G+P + G
Sbjct: 237 MTTGRPGEFGEIGRRFLG 254
>gi|256396658|ref|YP_003118222.1| glutamate racemase [Catenulispora acidiphila DSM 44928]
gi|256362884|gb|ACU76381.1| glutamate racemase [Catenulispora acidiphila DSM 44928]
Length = 295
Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V++ + +P Y D PYG ++ + ++
Sbjct: 15 DAPIGIFDSGFGGLTVVRALLDQLPHEAVSYFGDTARAPYGPRPIAQVRAYALECMDKLV 74
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACN+A + + R + PA++ A A T++ + ++ST +T
Sbjct: 75 ESG-VKMLVIACNSASGAVLRDARERYEIPVVEVIRPAVRLAVAATRNQHVGVISTRSTR 133
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + Q + VE +E+ K
Sbjct: 134 RSMAYVDAFAA-APQIQLTTQECPRFVEFVEAGET----AGEELLKVAREYLDPVAAAGV 188
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ V + V +++++ A+ +L + + H
Sbjct: 189 DTLILGCTHYPLLTGVISYVMGEDVILINSAEETAKDVFRVLAENALMRPGDLPEPAHTF 248
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G PD ++ + G
Sbjct: 249 TTTGDPDQFLQIGQRFLG 266
>gi|256375157|ref|YP_003098817.1| glutamate racemase [Actinosynnema mirum DSM 43827]
gi|255919460|gb|ACU34971.1| glutamate racemase [Actinosynnema mirum DSM 43827]
Length = 264
Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 8/256 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P YV D PYG ++K + L +
Sbjct: 4 ADAPIGIFDSGVGGLTVARAIMDQLPAERIRYVGDTANGPYGPLPIAQVRKHALDLADKL 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + VIACNTA + R + +PA+++A A T+SG + ++ T +T
Sbjct: 64 VA-DGVKMLVIACNTASAACLRDARERYDVPVVEVVLPAVRRAVATTRSGRVGVIGTQST 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + V+ VE ++ + +
Sbjct: 123 ITSGAYQDTFAA-ARDVQVTAVACPRFVDFVERG----TTSGRQVLGIAQAYLEPLQRAD 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ V + + V + +++ + +L + + D
Sbjct: 178 VDTLVLGCTHYPLLTGVVQLVMGDGVTLVSSAEETVKDVVRVLTERDQFR-EGEPDQRFT 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G + RL + F
Sbjct: 237 STGSVETF-ERLARRF 251
>gi|300703743|ref|YP_003745345.1| glutamate racemase [Ralstonia solanacearum CFBP2957]
gi|299071406|emb|CBJ42725.1| Glutamate racemase [Ralstonia solanacearum CFBP2957]
Length = 277
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 6/248 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 1 MTARAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRV 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++ VIACNTA LR ++ +G P +K A A +QS ++ +L+
Sbjct: 61 CEWLV-GQGCKALVIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T +TLR + L+ + C + L +E + + ++
Sbjct: 119 TESTLRSDKFARLLGNVSGDCQVLCQPGYGLVPLIERG----DTHSPAVLELLQAHLQPM 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTHYP + ++++ + +D ++AR L +
Sbjct: 175 LDAGADTLVLGCTHYPFLRDAIQEIAGERLALIDTGHAVARHLGRTLAAAHLQAAGAAAS 234
Query: 248 HALFLSGK 255
+G
Sbjct: 235 PRFLSTGD 242
>gi|167039186|ref|YP_001662171.1| glutamate racemase [Thermoanaerobacter sp. X514]
gi|300913219|ref|ZP_07130536.1| glutamate racemase [Thermoanaerobacter sp. X561]
gi|307723767|ref|YP_003903518.1| glutamate racemase [Thermoanaerobacter sp. X513]
gi|229486283|sp|B0K3R0|MURI_THEPX RecName: Full=Glutamate racemase
gi|166853426|gb|ABY91835.1| glutamate racemase [Thermoanaerobacter sp. X514]
gi|300889904|gb|EFK85049.1| glutamate racemase [Thermoanaerobacter sp. X561]
gi|307580828|gb|ADN54227.1| glutamate racemase [Thermoanaerobacter sp. X513]
Length = 264
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 8/255 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + + +
Sbjct: 4 RPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMRE 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ VIACNT +I +S + + F + AA YT + I +++T T+
Sbjct: 64 QK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVE 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I ++ + +E+ I + K C E + K D
Sbjct: 120 SKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYETASK----CLKELKEKDID 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYPL+ V ++ V +D + +A + L + + ++ F+S
Sbjct: 176 TLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQIRGKAEFFVS 235
Query: 254 GKPDIAMRRLMQGFG 268
G D ++ G
Sbjct: 236 GDKDNFIKTAEMLLG 250
>gi|256827100|ref|YP_003151059.1| glutamate racemase [Cryptobacterium curtum DSM 15641]
gi|256583243|gb|ACU94377.1| glutamate racemase [Cryptobacterium curtum DSM 15641]
Length = 264
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 6/252 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GG+ VL+ + +P +F+Y D PYG+ ++ + +L +
Sbjct: 10 VGVFDSGVGGISVLRNLVRELPAENFLYYGDSAHAPYGDKTIVEVRSLSANIVETMLARG 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA + + LR +P + +G PA+K AA Q I +++T TL+
Sbjct: 70 -VKAIVIACNTATSAAAEHLRECYPGLPIIGMEPALKPAAINPQHQNILVMATTVTLKLD 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L H++ SQ HI + LA VE + D I+ + G+ D +
Sbjct: 129 KFQQLAHTWGSQSHIIALPCPGLADLVETG----DLDSDAIRSYLAEKLAPYRGQ-VDSV 183
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + Q+ V D AR+ R LL + +F +
Sbjct: 184 VLGCTHYPFLKRQIHQVLGAEVPLFDGGAGCARQTRRLLSETHLLVNTPQTGRVIFETSS 243
Query: 256 PDIAMRRLMQGF 267
D +L +
Sbjct: 244 ADTQTLKLYERL 255
>gi|315655639|ref|ZP_07908537.1| glutamate racemase [Mobiluncus curtisii ATCC 51333]
gi|315489703|gb|EFU79330.1| glutamate racemase [Mobiluncus curtisii ATCC 51333]
Length = 271
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 62/264 (23%), Positives = 104/264 (39%), Gaps = 14/264 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P IY+ D PYG +K+ + + ++
Sbjct: 5 NAPIGIFDSGLGGLTVARSIIDQLPGESVIYIGDTANSPYGTKPVERVKELSLSVMDKLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
D+ + VIACNTA RS + + L + PA+ +A + T++G I +++T
Sbjct: 65 DRG-VKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIATH 123
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ +H+Y Q + + VE E+
Sbjct: 124 TTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSGP----ELLAVAREYLDPIRD 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR----INTHQTRV 244
D +VL CTHYPL+ V + V + +++ A R LL + + V
Sbjct: 179 AGVDTLVLGCTHYPLLSGVISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGTDTV 238
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
+ +G R + G
Sbjct: 239 NPRYQFLATGDTQTFTRLARRFLG 262
>gi|152978530|ref|YP_001344159.1| glutamate racemase [Actinobacillus succinogenes 130Z]
gi|150840253|gb|ABR74224.1| glutamate racemase [Actinobacillus succinogenes 130Z]
Length = 264
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 78/259 (30%), Positives = 136/259 (52%), Gaps = 5/259 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL FDSG+GG V +++ L+P+ H++Y D+ FPY + L +R+ + + I
Sbjct: 1 MKPTILFFDSGVGGFSVYSEVKSLLPDCHYLYCFDNAFFPYSERSEETLIERVSKICTTI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+Y L VIACNTA T++ LR TF S+ +G VPAIK AA+ + + I +L+T T
Sbjct: 61 DIRYPLDLIVIACNTASTVVLPSLRRTF-SIPIVGTVPAIKPAASVSHTKHIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R Y + LI Y + C + + S +L E+ G + +++KE++ K
Sbjct: 120 VKREYVNTLIARYATDCRVERLGSTVLPEIAEQKIKGNSVDLLQLRKELQAWIC---LKD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PLI R P +LD+ +IA+R + LL + ++ +
Sbjct: 177 LDTVILGCTHFPLIKEEIRICLPQVKFFLDSGYAIAKRVKSLLENSKVRSEKEKNNRIFY 236
Query: 252 LSG-KPDIAMRRLMQGFGL 269
+ + ++ +G
Sbjct: 237 TKDFNFEQQFYQALKRWGF 255
>gi|256002760|gb|ACU52625.1| glutamate racemase [Bacillus sp. LL3]
Length = 250
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 99/238 (41%), Gaps = 7/238 (2%)
Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92
+P+ + IYV D PYG + + + + +L+ + + VIACNTA +
Sbjct: 1 MRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYLLENHHIKMLVIACNTATAIAL 60
Query: 93 DELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151
++++ + +G + P + A T++ I ++ T T++ + + +
Sbjct: 61 EDIQRK-TDIPVVGVIQPGARTAIKVTKNQHIGVIGTINTIKSRAYEQALLGLNADLQVE 119
Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
++ +L VE + ++ + +E +G D ++L CTHYP++ +
Sbjct: 120 NMACPLLVPFVESG----RFLQESAAEAVEASLEPLKGTAIDTLILGCTHYPILKDPIQD 175
Query: 212 LSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
V + + D AR +L +Q++ +H +G+ + + FG
Sbjct: 176 YMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQFLTTGERNGFAKIAEDWFG 233
>gi|237719665|ref|ZP_04550146.1| glutamate racemase [Bacteroides sp. 2_2_4]
gi|298482436|ref|ZP_07000622.1| glutamate racemase [Bacteroides sp. D22]
gi|229450934|gb|EEO56725.1| glutamate racemase [Bacteroides sp. 2_2_4]
gi|298271415|gb|EFI12990.1| glutamate racemase [Bacteroides sp. D22]
Length = 280
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P+ LG + P ++ +++ I +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + + + + S VE + + I+K I
Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYINQLLS-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + +
Sbjct: 247 GNCQFYTTEAEEKFSE 262
>gi|117620688|ref|YP_854602.1| glutamate racemase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562095|gb|ABK39043.1| glutamate racemase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 264
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL + +++R +P +++ Y D+ FPYG + AL + L S ++
Sbjct: 2 ANILVFDSGMGGLTIYREIRRALPAHNYFYCFDNANFPYGELSEAALTEVCTRLVSHMVV 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ L VIACNTA T+ LR+ ++ +G VPAIK AAA T++G I +L+TP T+
Sbjct: 62 EHDIDLVVIACNTASTIALPSLRAAM-TVPVVGVVPAIKPAAALTRNGCIGLLATPGTVS 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI + + L + L E G+ + +++ + + + D
Sbjct: 121 REYTHELIAQFAPGKRVLLKGATELVVEAEHKLAGLPVNMALLREVLADWL--EGEEHPD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFL 252
+VL CTH+PL+ RQL P +D+ ++A+R LL + T TR+ D +
Sbjct: 179 TLVLGCTHFPLLDEEIRQLMPA-CQLVDSGSAVAKRVAHLLAGLVTTPTRLEDVGGKAYC 237
Query: 253 SGKPDIAMRRL---MQGFGLKS 271
+ + D ++L +Q +GL S
Sbjct: 238 T-RLDAQTQKLTAPLQAWGLSS 258
>gi|300691131|ref|YP_003752126.1| glutamate racemase [Ralstonia solanacearum PSI07]
gi|299078191|emb|CBJ50834.1| Glutamate racemase [Ralstonia solanacearum PSI07]
Length = 277
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 6/248 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 1 MTTRAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPQFIAERTLRV 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++ VIACNTA LR+ ++ +G P +K AAA ++S ++ +L+
Sbjct: 61 CGWLV-GQGCKALVIACNTATAQAVHLLRAQL-AVPVIGVEPGLKPAAATSRSRVVGVLA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T +TLR + L+ + C + L +E + + ++
Sbjct: 119 TESTLRSDKFARLLGNVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLQAYLQPM 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTHYP + R+++ + +D ++AR L T
Sbjct: 175 LEAGADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVARHLGRTLAAAQLQATSAAAS 234
Query: 248 HALFLSGK 255
+
Sbjct: 235 PRFLSTAD 242
>gi|303236418|ref|ZP_07323007.1| glutamate racemase [Prevotella disiens FB035-09AN]
gi|302483390|gb|EFL46396.1| glutamate racemase [Prevotella disiens FB035-09AN]
Length = 280
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 104/263 (39%), Gaps = 14/263 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L+ +R +P+Y +IY+ D+ PYG+ + + + +
Sbjct: 10 GPIGVFDSGYGGLTILKGIREQLPQYDYIYLGDNARAPYGSRSFDIVYQFTLQAVKKLFS 69
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ CNTA ++ P LG + P + T+S I IL+
Sbjct: 70 -MGCQLVILGCNTASAKALRTIQKNDLPNIDPRRRVLGVIRPTAEIVGKLTESKHIGILA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP T++ + I + + + VE + + +KK I+ +
Sbjct: 129 TPGTIKSESYNMEIKKLWGNVEVTGEACPLWVPIVENNEAEGEGADYFVKKRIDHLL--Q 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245
+ D ++L CTHYP+++ +Q P + + + +A + L R
Sbjct: 187 TDPKIDTLILGCTHYPILLPKIKQYVPEGIRIISQGEYVASSLKDYLSRHKDMDNLCTKQ 246
Query: 246 DDHALFLSGKPDIA---MRRLMQ 265
F + D R +Q
Sbjct: 247 GSVRYFTTENADKFKETARIFLQ 269
>gi|134097799|ref|YP_001103460.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|291005565|ref|ZP_06563538.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|189030368|sp|A4F910|MURI_SACEN RecName: Full=Glutamate racemase
gi|133910422|emb|CAM00535.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338]
Length = 271
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 101/257 (39%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P YV D PYG ++ R + + ++
Sbjct: 3 HAPIGIFDSGVGGLTVARAIMDQLPGEALRYVGDTANAPYGPRPLADIRARTLAITDSLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACN+A + R + +PA+++A A T++G + ++ T AT+
Sbjct: 63 AEG-VKMLVIACNSASAACLRDARERYDVPVVEVVLPAVRRAVATTRNGRVGVIGTQATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + A VE + ++ + +
Sbjct: 122 TSRAYDDAFTA-APGVTLSTAACPRFADFVERGITSGR----QVLGLAQAYLDPLQQADV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALF 251
D +VL CTHYPL+ V + V + +++ A+ +L + H
Sbjct: 177 DTLVLGCTHYPLLTGVLQLAMGDHVTLVSSAEETAKDVLRVLTEHDLLAEADGEPAHEFR 236
Query: 252 LSGKPDIAMRRLMQGFG 268
+G + + + G
Sbjct: 237 ATGSGESFAKLARRFLG 253
>gi|295088107|emb|CBK69630.1| glutamate racemase [Bacteroides xylanisolvens XB1A]
Length = 280
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + D
Sbjct: 10 GPIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNKLFD 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P+ LG + P ++ +++ I +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + + + + S VE + + I+K I
Sbjct: 129 TAGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYINQLLS-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 187 KDPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKRHPEMDAKCTKN 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + +
Sbjct: 247 GNCQFYTTEAEEKFSE 262
>gi|300771876|ref|ZP_07081747.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33861]
gi|300761262|gb|EFK58087.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33861]
Length = 275
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 62/261 (23%), Positives = 103/261 (39%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG GGL V ++++ +PEY +IY+ D+ PYGN + + +
Sbjct: 8 NSPIGVFDSGYGGLSVFKEIKKELPEYDYIYLGDNARIPYGNRSFETVYQFTKECVFKLF 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
D L ++ACNTA ++ P LG + P + YT + I IL+T
Sbjct: 68 D-LGCDLVILACNTASAKALRSIQQHDLPPGKKVLGVIRPTTEIIKKYTITNKIGILATT 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I+ + + + VE + ++K+I +
Sbjct: 127 GTVKSESYKIEINKFYPEIEVFQHDCPFWVPLVENNEIDTEGARYFVEKDIHELLS--QS 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247
D IVLACTHYPL++ V +Q P + + +A + L R
Sbjct: 185 SEIDTIVLACTHYPLLLPVIKQFVPPHIQIISQGPIVAHSLKNYLERHPEVEQSCSKGST 244
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
F + + FG
Sbjct: 245 LQFFTTDDASGFEEKAEIFFG 265
>gi|325499291|gb|EGC97150.1| glutamate racemase [Escherichia fergusonii ECD227]
Length = 262
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A + P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMDMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G K+
Sbjct: 239 EAEQLLPVLQRYGFKT 254
>gi|256821416|ref|YP_003145379.1| glutamate racemase [Kangiella koreensis DSM 16069]
gi|256794955|gb|ACV25611.1| glutamate racemase [Kangiella koreensis DSM 16069]
Length = 272
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 12/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL +L+ +R +P + +YVAD PYG L KR + + +
Sbjct: 3 NAPIGVFDSGVGGLSILKSIREHLPNENLLYVADSAYAPYGRLPKDILHKRCTHIANFFV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA ++ + LRS F + + PAIK AA T++G I + +T TL
Sbjct: 63 EQGAKAM-VIACNTATAVMAEWLRSEF-DIPIIAMEPAIKPAAHATRTGKIGVFATNHTL 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ Y + + +VE + + + +E +
Sbjct: 121 KSDRYKKLLTEYAKDKKVFESACDGFVEQVETG----DLSSVKAFQLVEKYLQPMIDEHI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPV------DWLDNSDSIARRARCLLPRINTHQTRVFD 246
DV+VL CTHYP + + RQ+S V + +D+++ +L N +
Sbjct: 177 DVLVLGCTHYPFLAPLMRQISSQQVAGNQELQIIHTADAVSLHLTRVLAENNLLNFKDQQ 236
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ SG D + + Q
Sbjct: 237 FSRFYTSGDIDNSSKVFSQLL 257
>gi|197121115|ref|YP_002133066.1| glutamate racemase [Anaeromyxobacter sp. K]
gi|220915816|ref|YP_002491120.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196170964|gb|ACG71937.1| glutamate racemase [Anaeromyxobacter sp. K]
gi|219953670|gb|ACL64054.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 259
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 8/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+ D PYG + + + +L +
Sbjct: 4 IGIFDSGVGGLTVQRAILAALPSADTVYLGDTARVPYGTKSAETVTQYSLRNA-RVLARR 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L V+ACNTA + LR+ P P + AA +++G I ++ T T+
Sbjct: 63 EIDLLVVACNTASAVALPALRAELPVPVLGVVEPGARVAAKASRTGRIGVIGTQGTVASG 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I + + + EE ++ ++ + D +
Sbjct: 123 AYQAAILRERPGAEVVARACPLFVPLAEEGWTDP--DDEVVRGVVRRYLDPLRDAAIDTL 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYPL+ + P V +D++D+IA R +P + H ++
Sbjct: 181 VLGCTHYPLLREAIARALPE-VRLVDSADAIAEEVRARIPAV----AGRSGVHRFLVTDV 235
Query: 256 PDIAMRRLMQGFG 268
P+ + + G
Sbjct: 236 PERFLGVAGRFLG 248
>gi|256025994|ref|ZP_05439859.1| glutamate racemase [Escherichia sp. 4_1_40B]
Length = 285
Score = 282 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTIKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P + ++Q +G ++
Sbjct: 246 AKSADANIAFCMAMTPGAEQLLPVLQRYGFET 277
>gi|171463476|ref|YP_001797589.1| glutamate racemase [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171193014|gb|ACB43975.1| glutamate racemase [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 268
Score = 282 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 6/252 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL +L + +P++ +IY+AD PYG + R + L + + K
Sbjct: 4 IGVFDSGVGGLSILDEALRQLPQHDYIYLADSANAPYGEKSSDWIATRSLGLCNYLASK- 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++R+ ++ +G P IK AA +Q+ ++ +L+T ATL+
Sbjct: 63 ECDAIVVACNTATAEAIKQIRAQL-AIPIIGVEPGIKPAAMQSQNHIVGVLATEATLKSD 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + S C + L +E + + + K +E + D I
Sbjct: 122 KFNALLATLPSDCQFIKQAGAGLVPLIESGNADGEDTLELLAKHLE----PIQDAGADTI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + R+L + +D SD++ R+ + L + L LS K
Sbjct: 178 VLGCTHYPFLKKAIRKLLGESITLIDTSDAVVRQLKQQLESLKKESGNKEFGSVLLLSSK 237
Query: 256 PDIAMRRLMQGF 267
+ + + Q
Sbjct: 238 DESLLLLMAQDL 249
>gi|89110063|ref|AP_003843.1| glutamate racemase [Escherichia coli str. K-12 substr. W3110]
gi|90111671|ref|NP_418402.2| glutamate racemase [Escherichia coli str. K-12 substr. MG1655]
gi|170083436|ref|YP_001732756.1| glutamate racemase [Escherichia coli str. K-12 substr. DH10B]
gi|238903032|ref|YP_002928828.1| glutamate racemase [Escherichia coli BW2952]
gi|253775395|ref|YP_003038226.1| glutamate racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254163917|ref|YP_003047025.1| glutamate racemase [Escherichia coli B str. REL606]
gi|307140666|ref|ZP_07500022.1| glutamate racemase [Escherichia coli H736]
gi|730081|sp|P22634|MURI_ECOLI RecName: Full=Glutamate racemase
gi|229486276|sp|B1XBX8|MURI_ECODH RecName: Full=Glutamate racemase
gi|259509813|sp|C5A0R6|MURI_ECOBW RecName: Full=Glutamate racemase
gi|85676094|dbj|BAE77344.1| glutamate racemase [Escherichia coli str. K12 substr. W3110]
gi|87082355|gb|AAC76949.2| glutamate racemase [Escherichia coli str. K-12 substr. MG1655]
gi|169891271|gb|ACB04978.1| glutamate racemase [Escherichia coli str. K-12 substr. DH10B]
gi|238861332|gb|ACR63330.1| glutamate racemase [Escherichia coli BW2952]
gi|242379502|emb|CAQ34318.1| glutamate racemase [Escherichia coli BL21(DE3)]
gi|253326439|gb|ACT31041.1| glutamate racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975818|gb|ACT41489.1| glutamate racemase [Escherichia coli B str. REL606]
gi|253979974|gb|ACT45644.1| glutamate racemase [Escherichia coli BL21(DE3)]
gi|260451197|gb|ACX41619.1| glutamate racemase [Escherichia coli DH1]
gi|309704391|emb|CBJ03740.1| glutamate racemase [Escherichia coli ETEC H10407]
gi|315138532|dbj|BAJ45691.1| glutamate synthase [Escherichia coli DH1]
gi|323959264|gb|EGB54925.1| glutamate racemase [Escherichia coli H489]
Length = 285
Score = 282 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P + ++Q +G ++
Sbjct: 246 AKSADANIAFCMAMTPGAEQLLPVLQRYGFET 277
>gi|313898081|ref|ZP_07831620.1| glutamate racemase [Clostridium sp. HGF2]
gi|312957109|gb|EFR38738.1| glutamate racemase [Clostridium sp. HGF2]
Length = 259
Score = 282 bits (724), Expect = 3e-74, Method: Composition-based stats.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 6/255 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ +I +FDSG+GG+ VL+++R LMP+ ++Y D PYG + KR +
Sbjct: 1 MSSIDKAIGVFDSGLGGISVLKELRSLMPQEDYLYYGDSSFAPYGVKTKEEITKRCRSIC 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + + VIACNTA + ELR+ +P + +G PA+K A + +L+T
Sbjct: 61 AFFISQG-VKAVVIACNTATSACVKELRTLYPDLPIVGMEPALKPAVDGRHQQHVLVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL+ L+ + I+ L VE G E + + +
Sbjct: 120 QFTLKEKKFEQLMSRFDEDNTIYRQPCPKLVELVE---AGRLEDEAAVNSALREYLKPYD 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFD 246
+R D IVL CTH+ R L + +D + AR + LL +
Sbjct: 177 MERMDSIVLGCTHFVFYRSQLRNLIGDHIALVDGNAGTARHVQELLQERGVCRKPSSAAG 236
Query: 247 DHALFLSGKPDIAMR 261
+ ++ S + ++
Sbjct: 237 EVRIYNSLNKEAILK 251
>gi|255067504|ref|ZP_05319359.1| glutamate racemase [Neisseria sicca ATCC 29256]
gi|255048299|gb|EET43763.1| glutamate racemase [Neisseria sicca ATCC 29256]
Length = 269
Score = 282 bits (724), Expect = 3e-74, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A QAA T + I I++T T
Sbjct: 66 E-NDVKALVIACNTIAAVAGQKIRQKAGNMPVLDVISAGAQAALNTTSNNKIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH+ + ++ +L VEE ++ +++ ++ ++
Sbjct: 125 VNSNAYARAIHAQNPDTLVRTQATPLLVPLVEEGWLDHEVTRLTVREYLKPLLVD----D 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A L + T D+
Sbjct: 181 IDTLVLGCTHFPLLKPLIGKEA-QNVALVDSAITTAEATAQALAQAGLLNTENDSPDYRF 239
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 240 YVSDIPLRFRTIGERFLG 257
>gi|325203563|gb|ADY99016.1| glutamate racemase [Neisseria meningitidis M01-240355]
Length = 270
Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL + + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVCALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|326390909|ref|ZP_08212460.1| glutamate racemase [Thermoanaerobacter ethanolicus JW 200]
gi|325993057|gb|EGD51498.1| glutamate racemase [Thermoanaerobacter ethanolicus JW 200]
Length = 264
Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 16/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D+ P I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK
Sbjct: 1 MDSRP--------IGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + + ++ VIACNT +I +S + + F + AA YT +
Sbjct: 53 FAKQILNFMREQK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKK 108
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I ++T T+ I ++ + +E+ I + K
Sbjct: 109 IGAIATTRTVESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYETANK---- 164
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
C E + K D +VL CTHYPL+ V ++ V +D + +A + L + +
Sbjct: 165 CLKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNP 224
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFG 268
++ F+SG D ++ G
Sbjct: 225 QIRGKAEFFVSGDKDNFIKTAEMLLG 250
>gi|262273148|ref|ZP_06050964.1| glutamate racemase [Grimontia hollisae CIP 101886]
gi|262222726|gb|EEY74035.1| glutamate racemase [Grimontia hollisae CIP 101886]
Length = 263
Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 90/261 (34%), Positives = 134/261 (51%), Gaps = 9/261 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
S+LIFDSG+GGL V +++ L+PE H +Y D+ FPYG D L +R+ + + +
Sbjct: 2 KSVLIFDSGVGGLSVYKEIAQLLPEQHIVYAFDNAAFPYGELADDILIQRVCGMVASLCH 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA TL+ LRS S+ +G VPAIK AAA +++ I +L+TPAT+
Sbjct: 62 ELDIALVVIACNTASTLVLPHLRSLL-SIPVVGVVPAIKPAAAMSKTKHIGLLATPATVN 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
RTYT L+ + CH+ +V S L E GI + + +K+ + +TD
Sbjct: 121 RTYTKQLVEEFAPDCHVEMVGSTELVQMGEGKLRGIPVDKKILKQVLMPFI-----NKTD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+PL+ ++ +D+ +IA R LL T D L S
Sbjct: 176 CIVLGCTHFPLLRDEIEEILGDQCLVIDSGKAIANRVDTLLKERGALSTSFRDKKHLAFS 235
Query: 254 GKP---DIAMRRLMQGFGLKS 271
P + A+ + G +
Sbjct: 236 SAPVKDEEALNNELGKLGFSA 256
>gi|29349130|ref|NP_812633.1| glutamate racemase [Bacteroides thetaiotaomicron VPI-5482]
gi|29341037|gb|AAO78827.1| glutamate racemase [Bacteroides thetaiotaomicron VPI-5482]
Length = 280
Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R +PEY ++Y+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILNKIREALPEYDYVYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P LG + P ++ TQS I +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGGITQSRHIGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + ++ + VE + + I+K I+
Sbjct: 129 TAGTIKSESYPLEIHKLFPDIQVSGMACPMWVPLVENNESQNEGADYFIRKYIDQLLS-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ D ++L CTHYP+++ ++ +P + + + +A + L R +
Sbjct: 187 KDPEIDTMILGCTHYPILLPKIQEYTPKHIRIVAQGEYVAESLKDYLSRHPEMNAKCTQN 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + +
Sbjct: 247 GSCLFYTTEAEEKFVE 262
>gi|251793125|ref|YP_003007853.1| glutamate racemase [Aggregatibacter aphrophilus NJ8700]
gi|247534520|gb|ACS97766.1| glutamate racemase [Aggregatibacter aphrophilus NJ8700]
Length = 300
Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 88/262 (33%), Positives = 135/262 (51%), Gaps = 9/262 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ++L FDSG+GGL V Q+++ L+P+ H++Y D+ FPY + + +R + + I
Sbjct: 5 PKPTLLFFDSGVGGLSVYQEVQKLLPDCHYLYCFDNAFFPYSEKPEEGIVERTLKICQCI 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y L VIACNTA T++ LR F S+ +G VPAIK AA TQ+ I +L+T T
Sbjct: 65 DNMYPLDLIVIACNTASTVVLPVLRKHF-SIPIVGTVPAIKPAAEQTQTKHIGLLATKGT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R Y S+LI Y S C + + S L E G I +EIK E+ +
Sbjct: 124 VKRQYLSDLIDKYASFCQVEKIGSTKLVELAEHKLHGYPIDLNEIKVELSEW---ENIPD 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+PLI +Q P ++D+ +IA+R + LL + +
Sbjct: 181 LDVVVLGCTHFPLIKSEIQQCLPQVKYFIDSGVAIAKRVKSLLKEVKVRLKNQMNSQVFC 240
Query: 252 LSGKPDIAMRRLMQG---FGLK 270
KP + L+Q G +
Sbjct: 241 T--KPLVKEDSLLQRIHSLGFE 260
>gi|59801838|ref|YP_208550.1| glutamate racemase [Neisseria gonorrhoeae FA 1090]
gi|239999567|ref|ZP_04719491.1| glutamate racemase [Neisseria gonorrhoeae 35/02]
gi|240014744|ref|ZP_04721657.1| glutamate racemase [Neisseria gonorrhoeae DGI18]
gi|240017192|ref|ZP_04723732.1| glutamate racemase [Neisseria gonorrhoeae FA6140]
gi|240081170|ref|ZP_04725713.1| glutamate racemase [Neisseria gonorrhoeae FA19]
gi|240113384|ref|ZP_04727874.1| glutamate racemase [Neisseria gonorrhoeae MS11]
gi|240116270|ref|ZP_04730332.1| glutamate racemase [Neisseria gonorrhoeae PID18]
gi|240118556|ref|ZP_04732618.1| glutamate racemase [Neisseria gonorrhoeae PID1]
gi|240121267|ref|ZP_04734229.1| glutamate racemase [Neisseria gonorrhoeae PID24-1]
gi|240124100|ref|ZP_04737056.1| glutamate racemase [Neisseria gonorrhoeae PID332]
gi|240126283|ref|ZP_04739169.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679]
gi|254494283|ref|ZP_05107454.1| glutamate racemase [Neisseria gonorrhoeae 1291]
gi|260439916|ref|ZP_05793732.1| glutamate racemase [Neisseria gonorrhoeae DGI2]
gi|268595380|ref|ZP_06129547.1| glutamate racemase [Neisseria gonorrhoeae 35/02]
gi|268597280|ref|ZP_06131447.1| glutamate racemase [Neisseria gonorrhoeae FA19]
gi|268599457|ref|ZP_06133624.1| glutamate racemase [Neisseria gonorrhoeae MS11]
gi|268601935|ref|ZP_06136102.1| glutamate racemase [Neisseria gonorrhoeae PID18]
gi|268604265|ref|ZP_06138432.1| glutamate racemase [Neisseria gonorrhoeae PID1]
gi|268682724|ref|ZP_06149586.1| glutamate racemase [Neisseria gonorrhoeae PID332]
gi|268684866|ref|ZP_06151728.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679]
gi|75432415|sp|Q5F6P9|MURI_NEIG1 RecName: Full=Glutamate racemase
gi|59718733|gb|AAW90138.1| putative glutamate racemase [Neisseria gonorrhoeae FA 1090]
gi|226513323|gb|EEH62668.1| glutamate racemase [Neisseria gonorrhoeae 1291]
gi|268548769|gb|EEZ44187.1| glutamate racemase [Neisseria gonorrhoeae 35/02]
gi|268551068|gb|EEZ46087.1| glutamate racemase [Neisseria gonorrhoeae FA19]
gi|268583588|gb|EEZ48264.1| glutamate racemase [Neisseria gonorrhoeae MS11]
gi|268586066|gb|EEZ50742.1| glutamate racemase [Neisseria gonorrhoeae PID18]
gi|268588396|gb|EEZ53072.1| glutamate racemase [Neisseria gonorrhoeae PID1]
gi|268623008|gb|EEZ55408.1| glutamate racemase [Neisseria gonorrhoeae PID332]
gi|268625150|gb|EEZ57550.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679]
Length = 270
Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 -GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|114561314|ref|YP_748827.1| glutamate racemase [Shewanella frigidimarina NCIMB 400]
gi|122301132|sp|Q089S6|MURI_SHEFN RecName: Full=Glutamate racemase
gi|114332607|gb|ABI69989.1| glutamate racemase [Shewanella frigidimarina NCIMB 400]
Length = 259
Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 9/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL V+ ++R +P + + Y+ D+ PYGN + L + L +
Sbjct: 1 MSGPILVFDSGIGGLSVMNEIRKQLPLHDYCYLFDNARLPYGNLSEQELITGCVALITHH 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACNTA TL+ LR ++ +G VPAIK AA ++ I +L+TP T
Sbjct: 61 ARRLNASIVVVACNTASTLVLPLLRQQL-TIPIVGVVPAIKPAAMLSKKKHIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI+ + C + L + L E+Y +I D++ +
Sbjct: 120 VKRDYTQALINQFAGNCKVELFGTSDLVLLAEQYVAQQQIDMDKLNEI----LAPIAASN 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I V LD+ +++A+R R LL + ++
Sbjct: 176 IDVLVLGCTHFPMIATEISHYLGEGVTLLDSGEAVAKRVRFLLSK----ESNSNKQLQAC 231
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+ ++ + +G
Sbjct: 232 YTKDIGQGLKAALVDYGFS 250
>gi|218692257|ref|YP_002400469.1| glutamate racemase [Escherichia coli ED1a]
gi|29839540|sp|Q8FB89|MURI_ECOL6 RecName: Full=Glutamate racemase
gi|254766115|sp|B7MR95|MURI_ECO81 RecName: Full=Glutamate racemase
gi|218429821|emb|CAR10783.2| glutamate racemase [Escherichia coli ED1a]
Length = 285
Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NIPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R+YT LI + ++C I ++ S + E G + D +K+ +
Sbjct: 128 GIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
KE D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 188 RPWLRMKEP--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPD 245
Query: 241 QTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 246 AKSADANIAFCMAMTPEAEQLLPVLQRYGFET 277
>gi|317486144|ref|ZP_07944988.1| Asp/Glu/Hydantoin racemase [Bilophila wadsworthia 3_1_6]
gi|316922593|gb|EFV43835.1| Asp/Glu/Hydantoin racemase [Bilophila wadsworthia 3_1_6]
Length = 296
Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 6/252 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL MR LMP ++++ D PYG + + + + ++
Sbjct: 10 QLPIGLFDSGVGGLTVLDAMRRLMPGEDYLFLGDTARVPYGAKSQKTIVRYSLQAAAKLI 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ L VIACNTA LR T+P M +G + P + A + SG I++++T +T
Sbjct: 70 GQR-IKLLVIACNTATAAALPALRETWPDMPIIGVIEPGSRAACEASPSGDIAVIATEST 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + I + + ++ + EE I E + + +E F ++
Sbjct: 129 IRSGAYAEAILRRRPEAQVRSLACPLFVPLAEEGWFDGPIAEGVVSRYLEPLF--EKSPA 186
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHA 249
D +VL CTHYP++ R++ V +D++ + A + L +
Sbjct: 187 PDCLVLGCTHYPMLAAAIRKVVGPEVHIVDSAATTAEVVKRRLADKGLAHPQAGRTGRIR 246
Query: 250 LFLSGKPDIAMR 261
F++ P R
Sbjct: 247 FFITDDPQRFTR 258
>gi|17546675|ref|NP_520077.1| glutamate racemase [Ralstonia solanacearum GMI1000]
gi|20177976|sp|Q8XY07|MURI_RALSO RecName: Full=Glutamate racemase
gi|17428974|emb|CAD15658.1| probable glutamate racemase protein [Ralstonia solanacearum
GMI1000]
Length = 277
Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 6/248 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + +
Sbjct: 1 MTTRAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAGRTLRV 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++ VIACNTA LR ++ +G P +K A A ++S ++ +L+
Sbjct: 61 CEWLV-GQGCKALVIACNTATAQAVHLLREQL-AVPVIGVEPGLKPAVATSRSRVVGVLA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T +TLR + L+ + C + L +E + + + +
Sbjct: 119 TESTLRSDKFARLLGNVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLRAYLLPM 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTHYP + R+++ + +D ++AR L + T
Sbjct: 175 LEAGADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVARHLGRTLAAAHLQATGAAAS 234
Query: 248 HALFLSGK 255
+
Sbjct: 235 PRFLSTAD 242
>gi|167628589|ref|YP_001679088.1| glutamate racemase, putative [Heliobacterium modesticaldum Ice1]
gi|167591329|gb|ABZ83077.1| glutamate racemase, putative [Heliobacterium modesticaldum Ice1]
Length = 284
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 8/260 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ MP +Y AD PYG L + + + ++
Sbjct: 5 QPIGIFDSGVGGLTVAREVFRQMPGEEILYFADTAHVPYGPRPASELIRFALEITDFLVA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L ++ACNT+ +L D +R P ++A +++G I +L+T AT+R
Sbjct: 65 EGA-KLILVACNTSSSLALDIIRERHKVPVVGVVDPGAEEAVRLSRNGRIGVLATEATIR 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S + S + + VE + DE + + D
Sbjct: 124 KGAHSRRVGELNSAMQVFGQACPRFVPLVESG----RYSGDEARAASKQYLAPLIEAGVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INTHQTR-VFDDHAL 250
IVL CTHYP + V R++ + +D + + + L+ R I R H
Sbjct: 180 TIVLGCTHYPFLEPVIREVIGEKITLIDPACQTVAQGKALMERGIIPFRDPRGPKPRHRF 239
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
++SG P R G+
Sbjct: 240 YVSGDPVSFARVGGALLGVP 259
>gi|219871943|ref|YP_002476318.1| glutamate racemase [Haemophilus parasuis SH0165]
gi|254766116|sp|B8F7R8|MURI_HAEPS RecName: Full=Glutamate racemase
gi|219692147|gb|ACL33370.1| glutamate racemase [Haemophilus parasuis SH0165]
Length = 267
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P+ H++Y D+ FPY + L + + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRENLPDAHYLYCFDNAYFPYSEKSEAVLIELAVGIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y + V+ACNTA T++ LR F +M +G VPAIK AA +Q+ I +L+T T
Sbjct: 61 AENYPLDMVVVACNTASTVVLPALRERF-AMPIVGTVPAIKPAAQISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y LI Y C + + S L VEE + ++K +E +
Sbjct: 120 VTRPYVDELIERYAKDCVVERIGSTDLVEIVEEKQQTGSVDMRRLQKVVEEW---QSHPT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F
Sbjct: 177 LDTVILGCTHFPLVKEELQQLLPRVSFFVDPGNGIANRVVSLLQDVKRNVNNENKENQAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + ++R +MQ +G K
Sbjct: 237 CTQNSENFLKREKVMQNWGFK 257
>gi|305664609|ref|YP_003860896.1| glutamate racemase [Maribacter sp. HTCC2170]
gi|88708626|gb|EAR00862.1| glutamate racemase [Maribacter sp. HTCC2170]
Length = 262
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GG + +++ +P + +Y AD PYG + + + +++L
Sbjct: 5 PIGIFDSGVGGTSIWKEINVQLPNENTVYFADSENAPYGEKSSEEIIQLSVKN-TELLLG 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA T D LR + + F+G PAIK AA ++S + +L+T TL
Sbjct: 64 KGCKLIVVACNTATTNAIDHLRKNY-DVPFIGIEPAIKPAALQSKSKTVGVLATKGTLTS 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + ++ + + L +EE KI E ++ + K D
Sbjct: 123 SLFHSTSENHTNGITVIEQVGKGLVPLIEEG----KINSKETRELLFSYIGPMLEKGIDY 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLS 253
+VL CTHYP ++ V L P V +D+ +++AR+AR +L + T+ + H + +
Sbjct: 179 LVLGCTHYPYLIPVLNDLIPDHVKIIDSGEAVARQARAVLEQKKITNSSHNTAYHKFYTN 238
Query: 254 G 254
Sbjct: 239 A 239
>gi|240128767|ref|ZP_04741428.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035]
gi|268687151|ref|ZP_06154013.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035]
gi|268627435|gb|EEZ59835.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035]
Length = 270
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 -GHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLGTGNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|299066438|emb|CBJ37623.1| Glutamate racemase [Ralstonia solanacearum CMR15]
Length = 277
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 6/248 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + +
Sbjct: 1 MTARAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAGRTLRV 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++ + L VIACNTA LR ++ +G P +K A A ++S ++ +L+
Sbjct: 61 CEWLVGQGCKAL-VIACNTATAQAVHLLREQL-AVPVIGVEPGLKPAVATSRSRVVGVLA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T +TLR + L+ + C + L +E + + + +
Sbjct: 119 TESTLRSDKFARLLGTVSGDCRVLCQPGYGLVPLIERG----DTHSPAVLELLRAYLLPM 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTHYP + R+++ + +D ++AR L + T
Sbjct: 175 LEAGADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVARHLGRTLAAAHLQATGAAAS 234
Query: 248 HALFLSGK 255
+
Sbjct: 235 PRFLSTAD 242
>gi|60680023|ref|YP_210167.1| putative glutamate racemase [Bacteroides fragilis NCTC 9343]
gi|265765173|ref|ZP_06093448.1| glutamate racemase [Bacteroides sp. 2_1_16]
gi|60491457|emb|CAH06207.1| putative glutamate racemase [Bacteroides fragilis NCTC 9343]
gi|263254557|gb|EEZ25991.1| glutamate racemase [Bacteroides sp. 2_1_16]
Length = 280
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L + P LG + P + + TQ+ + IL+
Sbjct: 70 -MGCHLVILACNTASAKALRTIQMNDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ +H + + + VE + + I+K I+
Sbjct: 129 TAGTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEANGEGADFFIRKYIDNLLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ ++ D +VL CTHYP+++ ++ P V + + +A + L R +
Sbjct: 187 KDRQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHRHPEMDMKCTRE 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + D +
Sbjct: 247 GKCRFYTTEAEDKFIE 262
>gi|157147233|ref|YP_001454552.1| glutamate racemase [Citrobacter koseri ATCC BAA-895]
gi|157084438|gb|ABV14116.1| hypothetical protein CKO_03024 [Citrobacter koseri ATCC BAA-895]
Length = 260
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 137/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPNLHYIYAFDNVAFPYGEKSEAFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGEPVSLEELRRILRPWLRMPEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSAEANIAFCMAMTP 238
Query: 257 DI-AMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 ETEQLIPVLQRYGFET 254
>gi|86157092|ref|YP_463877.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773603|gb|ABC80440.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 259
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 10/254 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+ D PYG + + + +L +
Sbjct: 4 IGIFDSGVGGLTVQRAILAALPSADTVYLGDTARVPYGTKSAETVTQYSLRNA-RVLARR 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+ L V+ACNTA + LR+ S+ LG V P + AA +++G I ++ T T+
Sbjct: 63 EIDLLVVACNTASAVALPALRAEL-SVPVLGVVDPGARVAAKASRTGRIGVIGTQGTVAS 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I + + + EE ++ ++ + G D
Sbjct: 122 GAYQEAIRRERPGAEVVARACPLFVPLAEEGWTDP--DDEVVRGIVRRYLDPLRGAAIDT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ + P V +D++++IA R +P H ++
Sbjct: 180 LVLGCTHYPLLRAAIARELPE-VRLVDSAEAIAEEVRARIP----AAPGRTGVHRFLVTD 234
Query: 255 KPDIAMRRLMQGFG 268
P+ + + G
Sbjct: 235 VPERFLAVAGRFLG 248
>gi|191169526|ref|ZP_03031256.1| glutamate racemase [Escherichia coli B7A]
gi|193063978|ref|ZP_03045064.1| glutamate racemase [Escherichia coli E22]
gi|193067960|ref|ZP_03048925.1| glutamate racemase [Escherichia coli E110019]
gi|194429405|ref|ZP_03061929.1| glutamate racemase [Escherichia coli B171]
gi|194433275|ref|ZP_03065556.1| glutamate racemase [Shigella dysenteriae 1012]
gi|300902584|ref|ZP_07120560.1| hypothetical protein HMPREF9536_00757 [Escherichia coli MS 84-1]
gi|300926197|ref|ZP_07142003.1| hypothetical protein HMPREF9548_04219 [Escherichia coli MS 182-1]
gi|301324906|ref|ZP_07218467.1| hypothetical protein HMPREF9535_00045 [Escherichia coli MS 78-1]
gi|309797134|ref|ZP_07691531.1| hypothetical protein HMPREF9348_04371 [Escherichia coli MS 145-7]
gi|190900431|gb|EDV60250.1| glutamate racemase [Escherichia coli B7A]
gi|192929443|gb|EDV83051.1| glutamate racemase [Escherichia coli E22]
gi|192958580|gb|EDV89018.1| glutamate racemase [Escherichia coli E110019]
gi|194412552|gb|EDX28850.1| glutamate racemase [Escherichia coli B171]
gi|194418559|gb|EDX34647.1| glutamate racemase [Shigella dysenteriae 1012]
gi|300405344|gb|EFJ88882.1| hypothetical protein HMPREF9536_00757 [Escherichia coli MS 84-1]
gi|300417762|gb|EFK01073.1| hypothetical protein HMPREF9548_04219 [Escherichia coli MS 182-1]
gi|300848190|gb|EFK75950.1| hypothetical protein HMPREF9535_00045 [Escherichia coli MS 78-1]
gi|308119213|gb|EFO56475.1| hypothetical protein HMPREF9348_04371 [Escherichia coli MS 145-7]
gi|320180303|gb|EFW55235.1| Glutamate racemase [Shigella boydii ATCC 9905]
gi|320201538|gb|EFW76116.1| Glutamate racemase [Escherichia coli EC4100B]
gi|323155494|gb|EFZ41673.1| glutamate racemase [Escherichia coli EPECa14]
gi|323161254|gb|EFZ47167.1| glutamate racemase [Escherichia coli E128010]
gi|323177993|gb|EFZ63577.1| glutamate racemase [Escherichia coli 1180]
gi|323182072|gb|EFZ67482.1| glutamate racemase [Escherichia coli 1357]
gi|324019672|gb|EGB88891.1| hypothetical protein HMPREF9542_01635 [Escherichia coli MS 117-3]
gi|332083985|gb|EGI89194.1| glutamate racemase [Shigella boydii 5216-82]
gi|332085315|gb|EGI90489.1| glutamate racemase [Shigella dysenteriae 155-74]
Length = 262
Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|327250613|gb|EGE62321.1| glutamate racemase [Escherichia coli STEC_7v]
Length = 262
Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|262370036|ref|ZP_06063363.1| glutamate racemase [Acinetobacter johnsonii SH046]
gi|262315075|gb|EEY96115.1| glutamate racemase [Acinetobacter johnsonii SH046]
Length = 289
Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 12/268 (4%)
Query: 7 PCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K I IFDSGIGGL + Q++ +P FIY AD PYG +D +++
Sbjct: 13 PMPKATANAPIGIFDSGIGGLSIAQEIAKHLPHERFIYFADTAHVPYGPRDDQNIRELTA 72
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124
+ L + ++V+ACNTA D LR + +G VPA+K A ++S ++
Sbjct: 73 QAI-EWLYRQGCKVAVVACNTASAFSLDYLREHYGDNFPIIGLVPALKPAVLQSKSKTVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+TPAT R +++ + S + V+ + L VE A ++
Sbjct: 132 VLATPATFRGQLIKDVVDKFAQPSGVTVIPVTCLDLVPFVESGAQ----MSAACLATLKD 187
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYP + + + + +D+ ++AR+ +L +
Sbjct: 188 ILQPVVDQGADYLVLGCTHYPFLKIAIQSIFGQKLTLIDSGLAVARQTARILIKNELLFE 247
Query: 243 RVFDD---HALFLSGKPDIAMRRLMQGF 267
+ D ++SG ++R ++Q
Sbjct: 248 QNHDGDVRIECYVSGNNAESLRPILQLL 275
>gi|241759734|ref|ZP_04757834.1| glutamate racemase [Neisseria flavescens SK114]
gi|241319742|gb|EER56138.1| glutamate racemase [Neisseria flavescens SK114]
Length = 269
Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 8/263 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M +
Sbjct: 1 MSTSKQRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126
+L+ VIACNT + ++ +M L + A + A T++ I I+
Sbjct: 61 VDFLLE-NDVKALVIACNTIAAVAGQKILQKAGNMPVLDVISAGAEAALQTTKNNRIGII 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ + IHS + + ++ +L VEE ++ +++ ++ +
Sbjct: 120 ATNTTVNSNAYARAIHSKNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLAD 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-F 245
D +VL CTH+PL+ + + V +D++ + A L + T
Sbjct: 180 ----DIDTLVLGCTHFPLLKPLISHEA-QNVTLVDSAITTAEATAKALAQAGLLNTENDN 234
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
D+ ++S P + G
Sbjct: 235 PDYRFYVSDIPLRFRTIGERFLG 257
>gi|269218711|ref|ZP_06162565.1| glutamate racemase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211822|gb|EEZ78162.1| glutamate racemase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 275
Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 11/260 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + PE Y+ D PYG +++ + + ++D
Sbjct: 4 RPIGIFDSGVGGLTVARAIIDQFPEESITYIGDTAHTPYGPKPIAQVRELALDIMDSLVD 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+ VIACN+A + + R + S+ + + PA+++A + T++ I ++ T
Sbjct: 64 SG-VKMLVIACNSASAAVLHDARERYQAARSIPVVEVIQPAVRRAVSATRNRRIGVIGTE 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + + + + VE ++++ E
Sbjct: 123 ATIGSGAYEDAFAA-APHLTLTTAACPEFVELVEAGITAGP----QVEEVAERYLAPVRD 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDH 248
D +VL CTHYPL+ V + ++D AR L + D
Sbjct: 178 AGVDTLVLGCTHYPLLAGAIGYTMGESVTLVSSADETARDVYAKLASRDLFAPPGNEPDR 237
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ +G P + G
Sbjct: 238 RFYATGDPARFGELAGRFLG 257
>gi|91791601|ref|YP_561252.1| glutamate racemase [Shewanella denitrificans OS217]
gi|123357218|sp|Q12SP7|MURI_SHEDO RecName: Full=Glutamate racemase
gi|91713603|gb|ABE53529.1| glutamate racemase [Shewanella denitrificans OS217]
Length = 277
Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 5/224 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P ++ Y+ D+ PYG+ + L + + L
Sbjct: 1 MSGPILVFDSGIGGLSVLAEIRKRLPAENYCYLFDNARLPYGDLSESELIRGCVELICQQ 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + + + V+ACNTA TL+ LR ++ +G VPAIK AA ++ I +L+TP T
Sbjct: 61 VQQVEAKIVVVACNTASTLVLPVLRQRL-TIPVVGVVPAIKPAALLSKRKHIGVLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + C + L S L E+ A + + ++ K + +
Sbjct: 120 VSRDYTHGLISQFAEDCQVDLFGSSELVMLAEQKAAKLPVNNQQLAKI----LAPIKASK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
DV+VL CTH+P+I Q V LD+ ++IA R LL
Sbjct: 176 LDVLVLGCTHFPMIKEELSQYLGESVLLLDSGEAIANRVASLLE 219
>gi|221214852|ref|ZP_03587821.1| glutamate racemase [Burkholderia multivorans CGD1]
gi|221165391|gb|EED97868.1| glutamate racemase [Burkholderia multivorans CGD1]
Length = 292
Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 8/243 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++
Sbjct: 22 PIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQ 81
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR
Sbjct: 82 RAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRS 139
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + + C L VE G ++ ++G D
Sbjct: 140 ARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADT 195
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LFL 252
IVL CTHYP + R L + +D SD+IAR+ +L + A
Sbjct: 196 IVLGCTHYPFLTPAIRSLIGERMTIVDTSDAIARQLARVLEQHGLRTPAGVPAAAPRFCS 255
Query: 253 SGK 255
+G
Sbjct: 256 TGD 258
>gi|116611238|gb|ABK03962.1| glutamate racemase [Arthrobacter sp. FB24]
Length = 312
Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +YV D PYG ++ + + +++
Sbjct: 3 SRPIGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDELV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILST 128
D L IACN+A + + R + + + + PA+++A A T+SG + ++ T
Sbjct: 63 DSG-VKLLTIACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVAATRSGRVGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + HI V+ S VE E+
Sbjct: 122 SATIGSRAYEDTFAA-APDLHITSVACPAFVSYVEAGIT----TGPELLAVAREYLEPLR 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247
D +VL CTHYPL+ V + V + +++ A+ L + +T +
Sbjct: 177 TAGVDTVVLGCTHYPLLTGVISYVMGEDVTLVSSAEETAKDVYRALVSHDLQRTLEAPPE 236
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
H +G+ + G
Sbjct: 237 HHFIATGEAGQFETLARRFLG 257
>gi|257069150|ref|YP_003155405.1| glutamate racemase [Brachybacterium faecium DSM 4810]
gi|256559968|gb|ACU85815.1| glutamate racemase [Brachybacterium faecium DSM 4810]
Length = 270
Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 101/261 (38%), Gaps = 12/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P+ +Y+ D PYG ++ + + +++
Sbjct: 3 NAPIGIFDSGVGGLTVARAVLDQLPQEELVYIGDTAHGPYGPRPIAEVRSLALEIMDELV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + + R + PA+++A A T++ + +++T T+
Sbjct: 63 -GHGVKMLVIACNTASAAVLRDARERYDVPVIEVIQPAVRRAVAATRNRRVGVIATEGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + VE + E+ + E
Sbjct: 122 TSRAYEDAFAA-APDLTLTAQACPRFVEFVENGV----VSGREVVEMAEEYLAPVREAEV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL- 250
D +VL CTHYP++ + V + +++ A L +T+ H
Sbjct: 177 DTLVLGCTHYPMLAGPISYVMGPDVTLVSSAEETALDVYSQLQATEQLRETQRPPRHVFS 236
Query: 251 ---FLSGKPDIAMRRLMQGFG 268
F +G + R + G
Sbjct: 237 QTAFGTGS-ENFARLSRRFLG 256
>gi|224367637|ref|YP_002601800.1| MurI [Desulfobacterium autotrophicum HRM2]
gi|223690353|gb|ACN13636.1| MurI [Desulfobacterium autotrophicum HRM2]
Length = 283
Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 7/247 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + +FDSG+GG+ VL+ +R L+P+ IYVAD PYGN ++ R +
Sbjct: 17 RSNDAPLGVFDSGVGGVSVLKWIRQLLPQEDLIYVADKGYAPYGNKSSDYVRDRAAHITR 76
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L+K V+ACNTA LRS F + F+G P ++ A T+SG+I +L+T
Sbjct: 77 FLLEKR-VKAVVVACNTATVTAITTLRSMFK-VPFIGIEPGVRPALNATRSGVIGVLATT 134
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TLR T + LI + + + L +VE + E +K +E +
Sbjct: 135 ETLRSTSFNALIQRFCKDIRVEVQECPGLMEQVES----MAFTTPETRKLLERYLVPLLE 190
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-H 248
K D IVL CTHYP +V + R+++ + ++ ++++R+ +L ++ TR
Sbjct: 191 KGADTIVLGCTHYPFLVPLVREMAGQEIRIIETGEAVSRQVMRILTTMDLLTTRTEPGST 250
Query: 249 ALFLSGK 255
+ + SG
Sbjct: 251 SFWTSGD 257
>gi|325963803|ref|YP_004241709.1| glutamate racemase [Arthrobacter phenanthrenivorans Sphe3]
gi|323469890|gb|ADX73575.1| glutamate racemase [Arthrobacter phenanthrenivorans Sphe3]
Length = 332
Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V + + +P +YV D PYG ++ + + +++
Sbjct: 23 SRPIGVFDSGVGGLTVARSIIDQLPNESILYVGDTAHGPYGPLPIAEVRANALGVMDELV 82
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILST 128
D L IACN+A + + R + + + + PA+++A A T+SG + ++ T
Sbjct: 83 DSG-VKLLTIACNSASAAVLRDARERYTAKYGIPVIEVIQPAVRRAVAATRSGRVGVIGT 141
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + I V+ S VE + E +
Sbjct: 142 SATIGSRAYEDTFAA-APDLAITSVACPEFVSYVEAGIT----TGPALLAVAEEYLAPLK 196
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247
D +VL CTHYPL+ V + V + +++ A+ L + +T +
Sbjct: 197 AAGVDTVVLGCTHYPLLTGVISYVMGADVTLVSSAEETAKDVYRALATHDLQRTDDAPPE 256
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
H +G + G
Sbjct: 257 HHFVATGDAGQFEALARRFLG 277
>gi|209884599|ref|YP_002288456.1| glutamate racemase [Oligotropha carboxidovorans OM5]
gi|209872795|gb|ACI92591.1| glutamate racemase [Oligotropha carboxidovorans OM5]
Length = 264
Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 102/248 (41%), Positives = 151/248 (60%), Gaps = 6/248 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL VL+++ P+ + YVADD FPYG E+ + R++ L D++D
Sbjct: 5 RAILVFDSGLGGLTVLREIAAARPDAAYTYVADDAFFPYGQHEEDEIIARVVPLIGDLID 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+++P L VIACNTA TL+ D LR + S+ F+G VPAIK A A +++ +S+L T T++
Sbjct: 65 RHRPDLVVIACNTASTLVMDHLRKAY-SVPFVGTVPAIKPACAASKTKKVSVLGTRGTVK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI ++ C + LV + LAS E G I +D ++ EI CF+E + RTD
Sbjct: 124 REYTRTLIRNFAQGCDVTLVGAENLASLAERALRGEAISDDAVRAEIAACFVE-DSPRTD 182
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL-FL 252
+VLACTHYPL++ ++++PWPV W+D + +IARR L+ R F
Sbjct: 183 TVVLACTHYPLLLEQIQRIAPWPVAWIDPAPAIARRVVSLI---GPQADRSAAPAKFLFT 239
Query: 253 SGKPDIAM 260
SG+ A
Sbjct: 240 SGRAPTAT 247
>gi|262375099|ref|ZP_06068333.1| glutamate racemase [Acinetobacter lwoffii SH145]
gi|262310112|gb|EEY91241.1| glutamate racemase [Acinetobacter lwoffii SH145]
Length = 290
Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V ++ +P F+Y AD PYG +D ++ +
Sbjct: 19 ADAPIGIFDSGVGGLSVALEIARHLPNERFVYYADTAHVPYGPRDDQEIRALTAQAI-EW 77
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + ++V+ACNTA D LR + + +G VPA+K A TQS +++L+TPA
Sbjct: 78 LYRQGCKVAVVACNTASAFSLDYLRDYYGENFPIIGLVPALKPAVLNTQSKTVAVLATPA 137
Query: 131 TLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T R ++I + +Q + V+S+ L VE + ++
Sbjct: 138 TFRGQLIKDVISRFAEPAQVKVLPVTSLDLVPFVEAGEQ----MSAACLQTLKEILQPVV 193
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVF 245
+ D +VL CTHYP + + + + +D+ ++AR+ +L + H+++
Sbjct: 194 DQGADYLVLGCTHYPFLKSSIQYIFGQKLTLIDSGFAVARQTAQILIKNGLLFEHESKES 253
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
L +SG+ +R ++Q
Sbjct: 254 VKIELVVSGQNAEQLRPILQHL 275
>gi|119715551|ref|YP_922516.1| glutamate racemase [Nocardioides sp. JS614]
gi|119536212|gb|ABL80829.1| glutamate racemase [Nocardioides sp. JS614]
Length = 282
Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 98/256 (38%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V + + +P +YV D PYG +++ + ++
Sbjct: 18 DAPIGIFDSGFGGLTVARSVIDQLPHESIVYVGDTARQPYGPKPIGEVREYALECLDHLV 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L VIACN+A + + R + PA ++A A +++G I ++ T AT
Sbjct: 78 ERGVKAL-VIACNSASAAMLRDARERYDVPVVEVIYPATRRAVAASRTGRIGVICTRATA 136
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + VE DE+ +
Sbjct: 137 ESMAYDDAFAA-APHVRLVTQPCPRFVDFVEAGVTSG----DELISVAHEYLDPLISEGV 191
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ V + V + +++ A+ +L + + + ++
Sbjct: 192 DTLILGCTHYPLLTGVISLVMGDNVTLVSSAEECAKDVYKMLVQTDLIRPSGEPAYSFLT 251
Query: 253 SGKPDIAMRRLMQGFG 268
+G P + G
Sbjct: 252 TGAPGEFETIGRRFLG 267
>gi|323359605|ref|YP_004226001.1| glutamate racemase [Microbacterium testaceum StLB037]
gi|323275976|dbj|BAJ76121.1| glutamate racemase [Microbacterium testaceum StLB037]
Length = 272
Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 94/256 (36%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +Y+ D PYG +++ + + ++
Sbjct: 3 DAPIGIFDSGVGGLTVARAVSQQLPRESILYIGDTARSPYGPKPIADVRRYALEVLDTLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA + + R + PA++ A + T++G I ++ T T+
Sbjct: 63 EQG-VKMLVIACNTASAAMLRDARERYDVPVVEVIGPAVRTAMSTTRNGRIGVIGTVGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+++ + + VE E+ E
Sbjct: 122 GSRAYQDMLE-VNENLTVFAEACPRFVEFVEAGVT----DSPEVLATAEQYLAPLRHAGV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDHALF 251
D +VL CTHYP + + V + + A+ R L+ R H
Sbjct: 177 DTLVLGCTHYPFLEGAISYVMGPDVSLVSSDSETAKDVYRQLVSRDLLAGPDATPRHRYE 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G RL
Sbjct: 237 ATGSSADDFLRLAHRL 252
>gi|160944622|ref|ZP_02091849.1| hypothetical protein FAEPRAM212_02135 [Faecalibacterium prausnitzii
M21/2]
gi|158443806|gb|EDP20810.1| hypothetical protein FAEPRAM212_02135 [Faecalibacterium prausnitzii
M21/2]
gi|295104374|emb|CBL01918.1| glutamate racemase [Faecalibacterium prausnitzii SL3/3]
Length = 274
Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 11/261 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSG+GGL ++++R +P IY D PYG+ + +
Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPHEDIIYFGDTGRVPYGSRSPETILQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ +L K + AC T + + P A ++AA T++
Sbjct: 53 YARQDVAFLLSK-NVKCIMAACGTVSSTYPAAEAAQLPVPYLGVVDAAAREAAFVTRNRR 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE--IKKEI 180
I ++ T AT+R L+ V I + + VE + K I
Sbjct: 112 IGVIGTAATIRSRSYEKLLRQLVPGVEITARACPLFVPLVEAGYVDHSEAGKQQITKLVI 171
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E D ++L CTHYPL+ + + V +D + + A +L
Sbjct: 172 AQYLTEVREAGVDTLILGCTHYPLLKSMIGEFMGPGVTLVDPAMTAAHHLERMLAERGLR 231
Query: 241 QTRVFDDHALFLSGKPDIAMR 261
+ ++S PD ++
Sbjct: 232 ASHESGQAHFYVSDVPDSFVQ 252
>gi|161524256|ref|YP_001579268.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
gi|160341685|gb|ABX14771.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
Length = 292
Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 8/243 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++
Sbjct: 22 PIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQ 81
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR
Sbjct: 82 RAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRS 139
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + + C L VE G ++ ++G D
Sbjct: 140 ARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADT 195
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LFL 252
IVL CTHYP + R L + +D SD+IAR+ +L + A
Sbjct: 196 IVLGCTHYPFLTPAIRSLIGERMTIVDTSDAIARQLARVLEQHGLRTPAGVPAAAPRFCS 255
Query: 253 SGK 255
+G
Sbjct: 256 TGD 258
>gi|152967707|ref|YP_001363491.1| glutamate racemase [Kineococcus radiotolerans SRS30216]
gi|151362224|gb|ABS05227.1| glutamate racemase [Kineococcus radiotolerans SRS30216]
Length = 282
Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 100/263 (38%), Gaps = 9/263 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I IFDSG+GGL V + + +P YV D PYG +++ +
Sbjct: 3 PARPDADLPIGIFDSGVGGLTVARAVLDQLPHEAVHYVGDTAHAPYGPKPIAEVRRLALD 62
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ +++ + VIACN+A + + R + PA+++A T++G + ++
Sbjct: 63 VLDRLVESG-VKMLVIACNSASAAMLRDARERYDVPVVEVIQPAVRRAVRATRNGRVGVI 121
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT+ + + + + VE E+ G
Sbjct: 122 GTRATISSRAYEDAFAA-APHLALTTAACPAFVEFVERGVTSGP----ELLTAARGYLAP 176
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RV 244
D +VL CTHYPL++ V R + V + +++ A L + R
Sbjct: 177 AIAADVDTLVLGCTHYPLLMAVLRSVVGDDVTLVSSAEETAFDVYRELAARELLRPDDRP 236
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
H +G A R L + F
Sbjct: 237 EPRHRFTSTGD-SAAFRHLARRF 258
>gi|325138826|gb|EGC61377.1| glutamate racemase [Neisseria meningitidis ES14902]
Length = 270
Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ + VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 67 E-HDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VEE ++ + + ++ +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLAD----G 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D+ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSVITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|153808969|ref|ZP_01961637.1| hypothetical protein BACCAC_03270 [Bacteroides caccae ATCC 43185]
gi|149128302|gb|EDM19521.1| hypothetical protein BACCAC_03270 [Bacteroides caccae ATCC 43185]
Length = 280
Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILNKIREILPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKDELR-----STFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA ++ P LG + P ++ TQS I IL+
Sbjct: 70 -LGCHLVILACNTASAKALRSIQMNNLPKIDPERRVLGVIRPTVECIGNITQSRHIGILA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ +H ++ V+ + VE + + I+K I +
Sbjct: 129 TAGTIKSESYPLEVHKLYPDIQVNGVACPMWVPLVENNEAQNEGADYFIRKYINQLL--Q 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ + D ++L CTHYPL++ +Q P + + + +A + L R + +
Sbjct: 187 KDSQIDTVILGCTHYPLLLPKIQQYIPDNIRVIAQGEYVAESLKDYLCRHPEMDIKCTKN 246
Query: 248 HA--LFLSGKPDIAMR 261
++ + + D +
Sbjct: 247 NSCLFYTTEAEDKFIE 262
>gi|333014021|gb|EGK33381.1| glutamate racemase [Shigella flexneri K-304]
Length = 265
Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|37678352|ref|NP_932961.1| glutamate racemase [Vibrio vulnificus YJ016]
gi|61214264|sp|Q7MQ40|MURI_VIBVY RecName: Full=Glutamate racemase
gi|37197091|dbj|BAC92932.1| glutamate racemase [Vibrio vulnificus YJ016]
Length = 263
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 141/266 (53%), Gaps = 11/266 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E Q ++LIFDSG+GGL V Q++ +PE ++ Y+ D+ +PYG L R+ L
Sbjct: 1 MESSNQPNVLIFDSGVGGLSVFQEINKRLPEVNYYYLFDNQAYPYGELSQETLLARVEAL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++ L VIACNTA T++ LR+ P + +G VPAIK A+ + + +++
Sbjct: 61 VVKMTQQFAIDLVVIACNTASTIVLPALRAKLP-IPVVGVVPAIKPASLL-ANRAVGLIA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT+ R YT +LI + + + L+ S L EE G ++ + E+ ++
Sbjct: 119 TPATVTRQYTHDLIRDFAHEKEVELLGSTRLVDIAEEKLRGRQVDQQELAMILKP----- 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ DV VL CTH+PL+ +Q+ + +D+ ++IARR + LL +++ T+
Sbjct: 174 MKHKVDVAVLGCTHFPLLKEEIQQVLGDEIILVDSGEAIARRVQSLLHQLSPQSTKTP-- 231
Query: 248 HALFLSGKP--DIAMRRLMQGFGLKS 271
+F + +P + A+ ++ G +
Sbjct: 232 WRIFSTAQPWDEAALNGSLKTMGFNA 257
>gi|253564140|ref|ZP_04841597.1| glutamate racemase [Bacteroides sp. 3_2_5]
gi|251947916|gb|EES88198.1| glutamate racemase [Bacteroides sp. 3_2_5]
gi|301161564|emb|CBW21104.1| putative glutamate racemase [Bacteroides fragilis 638R]
Length = 280
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L + P LG + P + + TQ+ + IL+
Sbjct: 70 -MGCHLVILACNTASAKALRTIQMNDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ +H + + + VE + + I+K I+
Sbjct: 129 TAGTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEASGEGADFFIRKYIDNLLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ ++ D +VL CTHYP+++ ++ P V + + +A + L R +
Sbjct: 187 KDRQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHRHPEMDMKCTRE 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + D +
Sbjct: 247 GKCRFYTTEAEDKFIE 262
>gi|326773725|ref|ZP_08233008.1| glutamate racemase [Actinomyces viscosus C505]
gi|326636955|gb|EGE37858.1| glutamate racemase [Actinomyces viscosus C505]
Length = 294
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 56/262 (21%), Positives = 105/262 (40%), Gaps = 12/262 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++
Sbjct: 3 DAPIGMFDSGVGGLTVARSVLDQLPHEQVLYIGDTANSPYGPRDIAEVRSLALGIMDELV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILST 128
D+ L VIACNTA + + R + + + + PA + AA T++G + +++T
Sbjct: 63 DRG-VKLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + V + + E E+ E +
Sbjct: 122 RGTVDSRAYDDALQA-VPGVELVSQACPRFVELAERGVT----TGPEVLDVAEEYLAPIK 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD- 247
D ++L CTHYPL+V + V + +SD A+ L N + +
Sbjct: 177 AAGVDTLILGCTHYPLLVGPISYVMGRDVTLVTSSDETAKDVYRALAGKNLLRGPEAPEP 236
Query: 248 -HALFLSGKPDIAMRRLMQGFG 268
H +G P+ + G
Sbjct: 237 RHDFASTGDPEAFSVLARRFLG 258
>gi|218887895|ref|YP_002437216.1| glutamate racemase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758849|gb|ACL09748.1| glutamate racemase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 308
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 15/272 (5%)
Query: 4 DNY--PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
DN I +FDSG+GGL VL+ +R MP +Y+ D PYG +
Sbjct: 18 DNAGGFAPDAAHLPIGMFDSGVGGLTVLKALRTRMPCEDILYLGDTARLPYGTKSAETIT 77
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
+ + S ++ + L V+ACNTA ++ D LR+ P + +G V P + A ++
Sbjct: 78 RYAVQAASRLVQRR-IKLLVVACNTATSVALDALRAANPGLPVVGVVQPGAQAACRASRR 136
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G I++++T +T+R IH I + EE KI ED + +
Sbjct: 137 GNIAVIATESTIRGRAYHKAIHGLRPDAQIIGQPCPLFVPLAEEGWVDGKIVEDIAARYL 196
Query: 181 EGCFIEKEGKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ F G D +VL CTH+PL+ R + +D++ + A + L
Sbjct: 197 DPIFRPASGSDTPETPDCLVLGCTHFPLLARAIRNVIGPEPVIVDSAATTALAVQAELQA 256
Query: 237 INTHQT-------RVFDDHALFLSGKPDIAMR 261
+ + + +R
Sbjct: 257 AGLVRPLRTGPGGNECGEARFLTTDDVPRFVR 288
>gi|313206123|ref|YP_004045300.1| glutamate racemase [Riemerella anatipestifer DSM 15868]
gi|312445439|gb|ADQ81794.1| glutamate racemase [Riemerella anatipestifer DSM 15868]
gi|315022930|gb|EFT35953.1| glutamate racemase [Riemerella anatipestifer RA-YM]
gi|325336432|gb|ADZ12706.1| Glutamate racemase [Riemerella anatipestifer RA-GD]
Length = 271
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 113/270 (41%), Gaps = 11/270 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M +DN Q I +FDSG+GGL V ++++ MP + IY D PYG+ A+
Sbjct: 1 MLVDNL----SPQQPIGVFDSGVGGLTVAKEIKRQMPHENIIYFGDTKHLPYGDKSKEAI 56
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQ 119
+ + +L++ VIACN+A E++ + A + V + + AY
Sbjct: 57 VRFSEKIAEFLLEQ-NCKAIVIACNSATANALKEVKELVGNRAIVFDVVNPVAEKIAYEI 115
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ +++T AT+ I + + +++ +L +EE I
Sbjct: 116 HTNVGVIATKATVNAGIYKKSIRRFNKFIKVDELATPLLVPAIEEGFKNHPITH----SI 171
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + K + ++L CTHYPL++ +Q V +D+ +A + L + +
Sbjct: 172 LYHYLSNSKLKNIETLILGCTHYPLLLEEIKQYYGSRVRVIDSPSIVANYIKISLEKHHL 231
Query: 240 HQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
+ + + +LS + + FG
Sbjct: 232 LNSEQKTTEMKFYLSDLTKNFEKISKKFFG 261
>gi|147677122|ref|YP_001211337.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
gi|146273219|dbj|BAF58968.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
Length = 266
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ +I +FDSGIGGL V ++ +P IY D PYG+ L + + D
Sbjct: 2 RKTGAIGLFDSGIGGLTVAVEVYRQLPAESTIYFGDTAHVPYGSRNPGELYRFASRIV-D 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L+ + ACNT+ +L L+ ++ +G + P + A T + I +++T
Sbjct: 61 FLEGEGAKYIIFACNTSSSLSLPILQER-KAVPMIGLIKPGVAAALQKTVNRRIGVIATE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ + + ++ L VE G + +++ +
Sbjct: 120 ATVKSGAYERELKRQDENVQVFCQAASRLVPLVEAGETGTPAAAEAVRE----YLFPLKE 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP + + V +D + + A L R+ +H
Sbjct: 176 AGIDTLILGCTHYPFLKPLIAGEMGPGVQLVDPAAATVEEAGKELQRLGLAAGGPAVPEH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+SG P + + G
Sbjct: 236 RFVVSGDPAAFQKAARRFLG 255
>gi|189350987|ref|YP_001946615.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
gi|189335009|dbj|BAG44079.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
Length = 290
Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats.
Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 8/243 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + ++++
Sbjct: 20 PIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAIGEWLVEQ 79
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR
Sbjct: 80 RAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRS 137
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + + C L VE G ++ ++G D
Sbjct: 138 ARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADT 193
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LFL 252
IVL CTHYP + R L + +D SD+IAR+ +L + A
Sbjct: 194 IVLGCTHYPFLTPAIRSLIGERMTIVDTSDAIARQLARVLEQHGLRTPAGVPAAAPRFCS 253
Query: 253 SGK 255
+G
Sbjct: 254 TGD 256
>gi|325263159|ref|ZP_08129894.1| glutamate racemase [Clostridium sp. D5]
gi|324031552|gb|EGB92832.1| glutamate racemase [Clostridium sp. D5]
Length = 277
Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 106/255 (41%), Gaps = 8/255 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E K I +FDSG+GGL V+++M +P + +Y D PYG+ + + + +
Sbjct: 5 AECKKTAPIGVFDSGVGGLTVVREMIRQLPNENIVYFGDTARVPYGSKSQNTIIRFSEQI 64
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ K + + CNTA L D +R F +P + A TQ+ + ++
Sbjct: 65 IRFLKKKKVKAIVIA-CNTASALALDAVRDEFEVPILGVVIPGARAAVEATQNLKVGVVG 123
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ + +IH + + + + VEE K+ ++ I+
Sbjct: 124 TDATVQSGMYTKIIHGMNPEITVIEKACPLFVPLVEEGFKEHKVTQE----IIDFYLESI 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR---INTHQTRV 244
+ D ++L CTHYPL+ R + ++ + A + LL +N Q
Sbjct: 180 KRTDIDAMILGCTHYPLLRSKIRAYMGDGIQIVNPAYETAMDLKKLLKEQDMVNDGQKAP 239
Query: 245 FDDHALFLSGKPDIA 259
+ + F+S +
Sbjct: 240 YSRYEFFVSDAAEKF 254
>gi|27364591|ref|NP_760119.1| glutamate racemase [Vibrio vulnificus CMCP6]
gi|320154994|ref|YP_004187373.1| glutamate racemase [Vibrio vulnificus MO6-24/O]
gi|29839520|sp|Q8DD39|MURI_VIBVU RecName: Full=Glutamate racemase
gi|27360710|gb|AAO09646.1| glutamate racemase [Vibrio vulnificus CMCP6]
gi|319930306|gb|ADV85170.1| glutamate racemase [Vibrio vulnificus MO6-24/O]
Length = 263
Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 141/266 (53%), Gaps = 11/266 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E Q ++LIFDSG+GGL V Q++ +PE ++ Y+ D+ +PYG L R+ L
Sbjct: 1 MESSNQPNVLIFDSGVGGLSVFQEINKRLPEVNYYYLFDNQAYPYGELSQETLLARVEAL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++ L VIACNTA T++ LR+ P + +G VPAIK A+ + + +++
Sbjct: 61 VVKMTQQFAIDLVVIACNTASTIVLPTLRAKLP-IPVVGVVPAIKPASLL-ANRAVGLIA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT+ R YT +LI + + + L+ S L EE G ++ + E+ ++
Sbjct: 119 TPATVTRQYTHDLIRDFAHEKEVELLGSTRLVDIAEEKLRGRQVDQQELAMILKP----- 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ DV VL CTH+PL+ +Q+ + +D+ ++IARR + LL +++ T+
Sbjct: 174 MKHKVDVAVLGCTHFPLLKEEIQQVLGDEIILVDSGEAIARRVQSLLHQLSPQSTKTP-- 231
Query: 248 HALFLSGKP--DIAMRRLMQGFGLKS 271
+F + +P + A+ ++ G +
Sbjct: 232 WRIFSTAQPWDEAALNGSLKTMGFNA 257
>gi|315656446|ref|ZP_07909335.1| glutamate racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|315493005|gb|EFU82607.1| glutamate racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 271
Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats.
Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 14/264 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P Y+ D PYG +K+ + + ++
Sbjct: 5 NAPIGIFDSGLGGLTVARSIIDQLPGESVTYIGDTANSPYGTKPVERVKELSLSVMDKLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
D+ + VIACNTA RS + + L + PA+ +A + T++G I +++T
Sbjct: 65 DRG-VKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIATH 123
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ +H+Y Q + + VE E+
Sbjct: 124 TTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSGP----ELLAVAREYLEPIRD 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR----INTHQTRV 244
D +VL CTHYPL+ + + V + +++ A R LL + + V
Sbjct: 179 AGVDTLVLGCTHYPLLSGIISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGADTV 238
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
+ +G R + G
Sbjct: 239 NPRYQFLATGDTQTFTRLARRFLG 262
>gi|27380813|ref|NP_772342.1| glutamate racemase [Bradyrhizobium japonicum USDA 110]
gi|27353978|dbj|BAC50967.1| glutamate racemase [Bradyrhizobium japonicum USDA 110]
Length = 265
Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats.
Identities = 106/272 (38%), Positives = 153/272 (56%), Gaps = 12/272 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ N P +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ + +
Sbjct: 1 MTNSP-------TILVFDSGLGGLTVLREVVATRPDAHYVYVADDAFFPYGHHSEDEIIA 53
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R++ L +++ + P L VIACNTA TL+ LR+ + S+ F+G VPAIK A A ++S
Sbjct: 54 RVVPLMGELIGTHDPDLVVIACNTASTLVLSHLRTAY-SLPFVGTVPAIKPACAQSKSRR 112
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+S+L T T++R YT LI + C + LV S LAS E G I +D+I E+
Sbjct: 113 VSVLGTKGTVKREYTKALIRDFAQGCEVTLVGSPELASLAERALGGHPISDDDILAELTP 172
Query: 183 CF---IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
CF G RTD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL
Sbjct: 173 CFVGDAADAGARTDTVVLACTHYPLLLDRLTRLAPWPVDWIDPAPAIARRVSDLLG-PAI 231
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
+F S + L FG ++
Sbjct: 232 GGIMQSGAEMIFTSNRVHDLSATLTPFFGGRA 263
>gi|113868495|ref|YP_726984.1| glutamate racemase [Ralstonia eutropha H16]
gi|113527271|emb|CAJ93616.1| glutamate racemase [Ralstonia eutropha H16]
Length = 269
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL+++R L+P +Y+AD PYG + ++ R + ++
Sbjct: 4 APIGVFDSGLGGLSVLREIRALLPHESVLYLADSKYAPYGEKPEKFVEARTLQACEWLIA 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA + LR P + +G P +K AAA ++S ++ +L+T TL+
Sbjct: 64 QGCKAL-VIACNTATGHAVELLRKQLP-LPIIGVEPGLKPAAAASRSKVVGVLATANTLK 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ S + + + L S +E+ I +++ ++ D
Sbjct: 122 SAKFARLLASLDGESRFICEAGLGLVSLIEQG----DIDGPAVRERLDTYLTPMLEAGAD 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + R + + +D +IAR+ L H F S
Sbjct: 178 TLVLGCTHYPFLSGTIRAMVGDQLALVDTGSAIARQLARKLAEHKLAAAPDATPHDRFAS 237
Query: 254 GKPDIAMRRLM 264
K D A R M
Sbjct: 238 TK-DAAHLRAM 247
>gi|308235626|ref|ZP_07666363.1| glutamate racemase [Gardnerella vaginalis ATCC 14018]
gi|311114374|ref|YP_003985595.1| glutamate racemase [Gardnerella vaginalis ATCC 14019]
gi|310945868|gb|ADP38572.1| glutamate racemase [Gardnerella vaginalis ATCC 14019]
Length = 260
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 103/256 (40%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ V++++R MP IY D PYG +++ +
Sbjct: 5 APIGVFDSGLGGISVVRELREAMPNERIIYFGDSANAPYGIKTPQEVRELSFKIVEHF-A 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPAT 131
VIACNTA + +LR + SM +G PA+K A + + + +TP T
Sbjct: 64 SLNVKAIVIACNTATSAAVKDLREHY-SMPIIGMEPALKLACDLGGGKPQRVIVAATPLT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L+ + L++ + I L VE G K + + + F +
Sbjct: 123 LKERKFAELMNRFTQDHQIFSRPCPDLVEIVENGDLGNK---NIVMSALHKYFDSYDLNN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+ FR+ P V +D + + +L +N + + L
Sbjct: 180 IDSVVLGCTHFVFYKSYFREFLPDCVKIVDGNAGTIHHLKSVLDSMNLLADKDDEGSVLL 239
Query: 252 LSGKPDIAMRRLMQGF 267
+ + +L Q
Sbjct: 240 TNSDSSDRIAKLSQSL 255
>gi|53711792|ref|YP_097784.1| glutamate racemase [Bacteroides fragilis YCH46]
gi|52214657|dbj|BAD47250.1| glutamate racemase [Bacteroides fragilis YCH46]
Length = 280
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L + P LG + P + + TQ+ + IL+
Sbjct: 70 -MGCHLVILACNTASAKALRTIQINDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ +H + + + VE + + I+K I+
Sbjct: 129 TAGTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEANSEGADFFIRKYIDNLLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ ++ D +VL CTHYP+++ ++ P V + + +A + L R +
Sbjct: 187 KDRQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHRHPEMDMKCTRE 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + D +
Sbjct: 247 GKCRFYTTEAEDKFIE 262
>gi|194290129|ref|YP_002006036.1| glutamate racemase [Cupriavidus taiwanensis LMG 19424]
gi|193223964|emb|CAQ69973.1| GLUTAMATE RACEMASE PROTEIN [Cupriavidus taiwanensis LMG 19424]
Length = 269
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL+++R L+P +Y+AD PYG +H ++ R + ++
Sbjct: 4 APIGVFDSGLGGLSVLREIRALLPHEPLLYLADSKYAPYGEKPEHFVEARTLQACEWMI- 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
VIACNTA LR P + +G P +K AAA + S ++ +L+T TL+
Sbjct: 63 GQGCKALVIACNTATGHAVALLRERLP-VPIIGVEPGLKPAAAASISKVVGVLATANTLK 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ S + + + L + VE+ ++ +++ +E D
Sbjct: 122 SAKFARLLASLDGESRFLCQAGLGLVTLVEQG----QLDGPAVRERLEAYLKPMLDAGAD 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + R ++ + +D ++AR+ L H FLS
Sbjct: 178 TLVLGCTHYPFLEGAIRAIAGDRLALVDTGIAVARQLARKLDEHALAALPGAAGHDRFLS 237
Query: 254 GKPDIAMRRLM 264
K D A R M
Sbjct: 238 TK-DAAHLRAM 247
>gi|91976246|ref|YP_568905.1| glutamate racemase [Rhodopseudomonas palustris BisB5]
gi|91682702|gb|ABE39004.1| glutamate racemase [Rhodopseudomonas palustris BisB5]
Length = 266
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 108/259 (41%), Positives = 155/259 (59%), Gaps = 4/259 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+IL+FDSG+GGL VL+++ P+ H Y ADD FPYG + AL R++ L +++
Sbjct: 4 HPNILVFDSGLGGLTVLREIVKARPDAHVTYAADDAFFPYGQHSEEALVGRVVPLIGELI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D + P L VIACNTA TL+ LR+ + S+ F+G VPAIK A A +++ +S+L T T+
Sbjct: 64 DAHTPALVVIACNTASTLVLSHLRAAY-SVPFVGTVPAIKPACAASKTKRVSVLGTSGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI + C + LV S LA+ E G + ++ I+ EI CF++ +G RT
Sbjct: 123 KREYTRALIRDFAGGCDVTLVGSAHLAALAEAALGGADVADEAIRAEIAPCFVDADGSRT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHA 249
D IVLACTHYPL++ +L+PWPVDW+D + +IARR LL + HQ+
Sbjct: 183 DTIVLACTHYPLLLDRLMRLAPWPVDWIDPAPAIARRVVTLLGPGSGQSDHQSDHPGAEM 242
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+F SG+P L FG
Sbjct: 243 VFTSGRPPRFTAALAPYFG 261
>gi|332291481|ref|YP_004430090.1| glutamate racemase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169567|gb|AEE18822.1| glutamate racemase [Krokinobacter diaphorus 4H-3-7-5]
Length = 268
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 68/253 (26%), Positives = 123/253 (48%), Gaps = 6/253 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I +FDSGIGG + +++ +P + IY+AD PYG + + ++
Sbjct: 4 KGNIGLFDSGIGGTSIWKEVVTHLPYENTIYLADSKHAPYGAKSKEEIIALSVKNTEKLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA T D LR + + F+G PAIK AA +++ I IL+T TL
Sbjct: 64 -QLGAKIIVVACNTATTNAIDYLRKNY-DIPFIGIEPAIKPAALNSKNKTIGILATKGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
T + + + V L +E ++ +K+ ++ ++
Sbjct: 122 NSTLFQDTSEKWTQGTKVIEVIGEGLVPLIERG----DLESSVLKELLKSYVAPMITQKI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL C+HYP ++ + +L P V +D+ ++AR+ + +L I +T +H LF
Sbjct: 178 DYLVLGCSHYPYLIPLLTELLPEEVTIIDSGLAVARQTKSVLTEIKALETATTGNHQLFT 237
Query: 253 SGKPDIAMRRLMQ 265
+G P I + L++
Sbjct: 238 NGDPSILKKVLVR 250
>gi|89901373|ref|YP_523844.1| glutamate racemase [Rhodoferax ferrireducens T118]
gi|89346110|gb|ABD70313.1| glutamate racemase [Rhodoferax ferrireducens T118]
Length = 271
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 77/257 (29%), Positives = 114/257 (44%), Gaps = 3/257 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSGIGGL +L+ +R +P F+Y+AD PYG ++ + R + + +L
Sbjct: 9 KRPIGVFDSGIGGLSILKALRAELPREDFVYMADSGHAPYGERDEAHVIARSSAITTHLL 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y V+ACNTA LR P + +G PA+K A A +++ I +++T +TL
Sbjct: 69 AQYDIQALVVACNTATAAAISTLRQAHPLLPIIGLEPALKPALALSKTRRIGVMATRSTL 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L+ S Q LA +E I G F EG
Sbjct: 129 GSAKFGTLVASLAGQAEFMCQPCDGLADAIERQDTTKTIALCAYYTGAIGRFGINEG-EI 187
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP RQL V +D +++AR+ R LLP ++ T L
Sbjct: 188 DTLVLGCTHYPFASDTLRQLLGSSVQLIDTGEAVARQTRRLLPSPSSADT--PGACRLLS 245
Query: 253 SGKPDIAMRRLMQGFGL 269
+G P GL
Sbjct: 246 TGDPSTLRHAAHHWLGL 262
>gi|148256679|ref|YP_001241264.1| glutamate racemase [Bradyrhizobium sp. BTAi1]
gi|146408852|gb|ABQ37358.1| glutamate racemase [Bradyrhizobium sp. BTAi1]
Length = 265
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 105/269 (39%), Positives = 148/269 (55%), Gaps = 12/269 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ N P +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ AL
Sbjct: 1 MTNRP-------TILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSQEALIA 53
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R++ L +++ ++P L VIACNTA LR+ + + F+G VPAIK A A +++
Sbjct: 54 RVVPLMGELIAGHRPDLIVIACNTASVQTLAPLRAAYAT-PFVGTVPAIKPACAQSRTKR 112
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+S+L T AT++R YT LI + C + LV S LAS E G + + I EI
Sbjct: 113 VSVLGTKATVQREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTSVSDAAIAAEIAP 172
Query: 183 CF---IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
CF RTD +VLACTHYPL++ +L+PWPV W+D + +IARR LL T
Sbjct: 173 CFVGDATDPAGRTDTVVLACTHYPLLLDRLERLAPWPVAWIDPAPAIARRVVDLLG-PAT 231
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+F S KP + L FG
Sbjct: 232 ASAGDCGATMIFTSQKPHQLSQALTSYFG 260
>gi|228913534|ref|ZP_04077163.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228846121|gb|EEM91143.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 279
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 10 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 69 KQFPLKALVVACNTAAATALAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE +++K+ + +
Sbjct: 128 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTEED 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 184 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 243
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 244 TTGSVSSFEHIAERWLGYQ 262
>gi|21673123|ref|NP_661188.1| glutamate racemase [Chlorobium tepidum TLS]
gi|25453118|sp|Q8KFN8|MURI_CHLTE RecName: Full=Glutamate racemase
gi|21646198|gb|AAM71530.1| glutamate racemase [Chlorobium tepidum TLS]
Length = 272
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSGIGGL V++ ++ +P IY D PYG+ ++K +++L
Sbjct: 9 DSPIGIFDSGIGGLTVVKAVQAALPSERIIYFGDTARVPYGSKSQVTIRKYARE-DTELL 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
K+QP L ++ACNT L D + T + +G + A + A T+SG I ++ T AT
Sbjct: 68 MKHQPKLIIVACNTVSALALDVVEQTAGGIPVIGVLKAGAELAVQKTKSGRIGVIGTQAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I + + + EE I + E GK
Sbjct: 128 IGSNAYTCAIREEKETLEVFPKACPLFVPLAEEGF----IDHPATRLVAEEYLAAFTGKE 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTHYP++ + ++ + +D+++++A +A LL L
Sbjct: 184 IDTLVLGCTHYPILRKIIESITGPEITIIDSAEAVASKAGELLAARGLLNQSPEKALPHL 243
Query: 251 FLSGKPDIAMRRLMQGF 267
+S P R L + F
Sbjct: 244 MVSDLPQKF-RELYRLF 259
>gi|145639716|ref|ZP_01795319.1| glutamate racemase [Haemophilus influenzae PittII]
gi|145271273|gb|EDK11187.1| glutamate racemase [Haemophilus influenzae PittII]
gi|309750685|gb|ADO80669.1| Glutamate racemase [Haemophilus influenzae R2866]
Length = 269
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 74/264 (28%), Positives = 132/264 (50%), Gaps = 5/264 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AD 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYNQ 238
Query: 249 ALFLSGKPDIA-MRRLMQGFGLKS 271
+ P+ + ++ + +G +S
Sbjct: 239 MFCTAHFPEESQFKKALHLWGFES 262
>gi|237785980|ref|YP_002906685.1| glutamate racemase [Corynebacterium kroppenstedtii DSM 44385]
gi|259509812|sp|C4LJY7|MURI_CORK4 RecName: Full=Glutamate racemase
gi|237758892|gb|ACR18142.1| Glutamate racemase [Corynebacterium kroppenstedtii DSM 44385]
Length = 288
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 101/276 (36%), Gaps = 25/276 (9%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + P +YV D PYG + + + D++
Sbjct: 3 NSPIGVFDSGVGGLTVARTIVDQAPTESIMYVGDTAHAPYGPKPREDIIRYSTAIADDLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA ++ D+ R + PA ++A A T++G + ++ T T+
Sbjct: 63 ARGA-KMIVIACNTAASVFLDKARELYDVPVVGVIEPASRRAVAATRNGRVGVIGTTGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + +H V VE +I E +
Sbjct: 122 ASGAYQRCIANLDPNIEVHAVDCPQFVPFVERGIT----TGRQIMGLAEAYLEPLQDVGV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----- 247
D +VL CTHYPL+ V + + V + +S+ + +L + + +
Sbjct: 178 DTVVLGCTHYPLLTGVIQLVMGDNVTLVSSSEEEGKEVPRVLYQEDLFNDANPEAESLDV 237
Query: 248 ---------------HALFLSGKPDIAMRRLMQGFG 268
+G P R + G
Sbjct: 238 VDANVVNDYAGPEPVRTFESTGDPHRFARLARRFLG 273
>gi|148827156|ref|YP_001291909.1| glutamate racemase [Haemophilus influenzae PittGG]
gi|166231038|sp|A5UFH0|MURI_HAEIG RecName: Full=Glutamate racemase
gi|148718398|gb|ABQ99525.1| glutamate racemase [Haemophilus influenzae PittGG]
Length = 269
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++
Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIH 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++
Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSS 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232
Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + P+ + ++ + +G +S
Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262
>gi|302877351|ref|YP_003845915.1| glutamate racemase [Gallionella capsiferriformans ES-2]
gi|302580140|gb|ADL54151.1| glutamate racemase [Gallionella capsiferriformans ES-2]
Length = 266
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I +FDSG+GGL VL+ +R L+P IYVAD PYG+ +++R + L ++
Sbjct: 5 SGAIGVFDSGVGGLSVLRHIRQLLPNERLIYVADSAHVPYGDKSARYIEQRSIELTRFLI 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA LR F S +G PA+K A A T++G++ +L+T TL
Sbjct: 65 SQGA-DAIVIACNTATAAAAATLRRDF-SCPIIGMEPAVKPAVAATKNGIVGVLATIGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
S L+ Y I L +VE + ++ +E +
Sbjct: 123 ESARFSALLERYAGNVTIVTQGCPGLVEQVERG----DLTGPLTRELVERYTTPLLEQGA 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + R ++ + +D +++AR L + + +
Sbjct: 179 DTLILGCTHYPFLAGLIRDIAGQDIQLIDTGEAVARHLLRRLQTELSDRAPTQASVQFWT 238
Query: 253 SGKPDIAMRRLMQGF 267
SG A + +
Sbjct: 239 SGDEARASTIISALW 253
>gi|300768032|ref|ZP_07077938.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|300494381|gb|EFK29543.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
Length = 279
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+++I DSG+GGL V+++ +P ++ D PYG ++ + ++
Sbjct: 10 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRTFSFQMADFLM 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K Q + VIACNTA LR S+ +G + P + A + I +++T T
Sbjct: 70 AK-QIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + I + + + VE + K+ + + + +
Sbjct: 128 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVA----KRVVAETLKQLKKQD 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D +VL CTHYPL+ + + + V +D+ +L ++ R +
Sbjct: 184 VDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIANDRSTKRYPDE 243
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ +G D G
Sbjct: 244 YYTTGAADQFEAIARNWLG 262
>gi|184159912|ref|YP_001848251.1| glutamate racemase [Acinetobacter baumannii ACICU]
gi|183211506|gb|ACC58904.1| Glutamate racemase [Acinetobacter baumannii ACICU]
gi|322509829|gb|ADX05283.1| Glutamate racemase [Acinetobacter baumannii 1656-2]
Length = 266
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 127/268 (47%), Gaps = 10/268 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T
Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E E+K ++
Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235
Query: 248 HALFLSGKP----DIAMRRLMQGFGLKS 271
H ++ S P D+ L + +K+
Sbjct: 236 HIIWTSSDPLEVADVTFSLLSEKLSVKA 263
>gi|89074505|ref|ZP_01160982.1| glutamate racemase [Photobacterium sp. SKA34]
gi|89049793|gb|EAR55343.1| glutamate racemase [Photobacterium sp. SKA34]
Length = 270
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 129/233 (55%), Gaps = 6/233 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D+ L +R + S +++
Sbjct: 5 KKIVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELPDNVLIERTNHIVSTLVE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+YQ L VIACNTA T++ LR ++ +G VPAIK AA +Q+ +I +L+TPAT++
Sbjct: 65 QYQADLVVIACNTASTIVLPTLRQNL-NIPIVGVVPAIKPAAKLSQTKVIGLLATPATVK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI+ + S C + ++ S L E+ G I E+ + + ++ D
Sbjct: 124 REYTQQLINQFASDCEVKMIGSTRLVEMAEQKLRGEAISLHELSEILAPW-----QQQVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
I+L CTH+PLI + + V +D+ +IA R LL + R +
Sbjct: 179 SIILGCTHFPLIKEEIKAVLNNEVSIVDSGKAIAVRVSSLLGLSEQEKQRHNE 231
>gi|229520053|ref|ZP_04409481.1| glutamate racemase [Vibrio cholerae TM 11079-80]
gi|229342841|gb|EEO07831.1| glutamate racemase [Vibrio cholerae TM 11079-80]
Length = 265
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVGTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLG--VEKGVGTNQKHQIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNINLEQLGFN 256
>gi|89895983|ref|YP_519470.1| hypothetical protein DSY3237 [Desulfitobacterium hafniense Y51]
gi|89335431|dbj|BAE85026.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 295
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 20/266 (7%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K Q+ I +FDSG+GGL V++++ +P+ IY D PYGN L + S
Sbjct: 16 KLAQHVIGMFDSGVGGLTVMKEIVTQLPDVQIIYFGDTARVPYGNRSREELIHFGEEIIS 75
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILST 128
++++ V+ACNT+ LR F ++ +G P K A T +G I +++T
Sbjct: 76 FLIEQGA-EAIVVACNTSSANAVPVLREQF-NLPLIGTIEPGAKAAIQATATGNIGLIAT 133
Query: 129 PATLRRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
AT+R S+ + +S+ + + + VE E +
Sbjct: 134 EATVRSKAYSSAVRRILSKRRGGHAIELVKAQACPLFVPLVEAGLS----HSPEARGIAR 189
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + D ++L CTHYP + V +++ + +D + ++ + +L ++ ++
Sbjct: 190 TYLAPIQEAQVDALILGCTHYPFLAPVIQEILGEEIILVDPAQAMTEELKEVLKQLEYNR 249
Query: 242 T------RVFDDHALFLSGKPDIAMR 261
+ H F+SG P + R
Sbjct: 250 ESGQETHKAPGHHRFFVSGDPVLFER 275
>gi|219670410|ref|YP_002460845.1| glutamate racemase [Desulfitobacterium hafniense DCB-2]
gi|219540670|gb|ACL22409.1| glutamate racemase [Desulfitobacterium hafniense DCB-2]
Length = 295
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 20/266 (7%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K Q+ I +FDSG+GGL V++++ +P+ IY D PYGN L + S
Sbjct: 16 KLAQHVIGMFDSGVGGLTVMKEIVTQLPDVQIIYFGDTARVPYGNRSREELIHFGEEIIS 75
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILST 128
++++ V+ACNT+ LR F ++ +G P K A T +G I +++T
Sbjct: 76 FLIEQGA-EAIVVACNTSSANAVPVLREQF-NLPLIGTIEPGAKAAIQATATGNIGLIAT 133
Query: 129 PATLRRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
AT+R S+ + +S+ + + + VE E +
Sbjct: 134 EATVRSKAYSSAVRRILSKRRGGHAIELVKAQACPLFVPLVEAGLS----HSPEARGIAR 189
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + D ++L CTHYP + V +++ + +D + ++ + +L ++ ++
Sbjct: 190 TYLAPIQEAQVDALILGCTHYPFLAPVIQEILGEEIILVDPAQAMTEELKEVLKQLEYNR 249
Query: 242 T------RVFDDHALFLSGKPDIAMR 261
+ H F+SG P + R
Sbjct: 250 ESGQETHKAPGHHRFFVSGDPVLFER 275
>gi|304390777|ref|ZP_07372729.1| glutamate racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|304325660|gb|EFL92906.1| glutamate racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
Length = 271
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 14/264 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P Y+ D PYG +K+ + + ++
Sbjct: 5 NAPIGIFDSGLGGLTVARSIIDQLPGESVTYIGDTANSPYGTKPVERVKELSLSVMDKLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
D+ + VIACNTA RS + + L + PA+ +A + T++G I +++T
Sbjct: 65 DRG-VKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIATH 123
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ +H+Y Q + + VE E+
Sbjct: 124 TTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSGP----ELLAVAREYLEPIRD 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR----INTHQTRV 244
D +VL CTHYPL+ + + V + +++ A R LL + + V
Sbjct: 179 AGVDTLVLGCTHYPLLSGIISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGTDTV 238
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
+ +G R + G
Sbjct: 239 NPRYQFLATGDTQTFTRLARRFLG 262
>gi|301170494|emb|CBW30101.1| glutamate racemase [Haemophilus influenzae 10810]
Length = 269
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 9/270 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++
Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIH 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++
Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232
Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + P+ + ++ + +G +S
Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262
>gi|237755668|ref|ZP_04584279.1| glutamate racemase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692180|gb|EEP61177.1| glutamate racemase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 260
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 12/248 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL V +++ P+ Y+ D PYGN + + + S +
Sbjct: 2 PIGVFDSGIGGLTVFKEIAASFPKVDLYYLGDTARVPYGNKSKTTIIRYSVECASYLYHN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
Y VIACNTA + D LR P + +G V P + A +++ I ++ T AT++
Sbjct: 62 YNVDAIVIACNTASSYALDTLREILP-IPVIGVVQPGAESAVKVSKNKKIGVIGTSATIK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S ++ + + VEE ++ + +K+ ++ + D
Sbjct: 121 SNSYLETLKSLDKDLEVYQKACPLFVPLVEEGWIDNEVAKLTVKEYLD----DLVKTGID 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYPL+ + + L P ++ +D+S +I + + ++N +T +F++
Sbjct: 177 TLILGCTHYPLLKNTIKGLYP-HLNIVDSSVAIVEHLKNI--KLNIEET---GKRKIFIT 230
Query: 254 GKPDIAMR 261
+ +
Sbjct: 231 DESHAFDK 238
>gi|298292133|ref|YP_003694072.1| glutamate racemase [Starkeya novella DSM 506]
gi|296928644|gb|ADH89453.1| glutamate racemase [Starkeya novella DSM 506]
Length = 280
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 96/251 (38%), Positives = 145/251 (57%), Gaps = 3/251 (1%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
+P +IL+FDSG+GGL V +++ P+ F+Y ADD GFPYG + L R++
Sbjct: 7 HPSAALRAPTILVFDSGLGGLSVFRELARTRPDARFVYAADDAGFPYGARSEDDLVARVL 66
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ ++ + P VIACNTA TL+ LR+ + S+ F+G VPAIK A + + +S+
Sbjct: 67 AVMDALVARLAPDAVVIACNTASTLVLPALRARY-SIPFVGTVPAIKPACEGSLTKQVSV 125
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+TP T++R YT LI + C + LV S LA E G K+ ++E EI F+
Sbjct: 126 LATPGTVKRDYTQALIRDFAGACRVTLVGSTRLAGLAEAAMVGEKVADEEFAAEIAPAFV 185
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ RTD +VLACTHYPL++ ++++PWPV W+D + +IARR LL + +
Sbjct: 186 REGKSRTDTVVLACTHYPLVLDRLQKVAPWPVRWVDPAPAIARRLSSLLGPVAFAASPAP 245
Query: 246 DDHALFLSGKP 256
LF +G+P
Sbjct: 246 --LRLFSTGQP 254
>gi|229154555|ref|ZP_04282672.1| Glutamate racemase [Bacillus cereus ATCC 4342]
gi|228628953|gb|EEK85663.1| Glutamate racemase [Bacillus cereus ATCC 4342]
Length = 284
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ ++ + + L
Sbjct: 15 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVLEMV-EFL 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 74 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE +++K+ + +
Sbjct: 133 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTEED 188
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 189 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 248
Query: 252 LSGKPDIAMRRLMQGFGL 269
+G + G
Sbjct: 249 TTGSALSFEHIAERWLGY 266
>gi|153803564|ref|ZP_01958150.1| glutamate racemase [Vibrio cholerae MZO-3]
gi|153831286|ref|ZP_01983953.1| glutamate racemase [Vibrio cholerae 623-39]
gi|229512363|ref|ZP_04401839.1| glutamate racemase [Vibrio cholerae TMA 21]
gi|229527102|ref|ZP_04416496.1| glutamate racemase [Vibrio cholerae 12129(1)]
gi|254292226|ref|ZP_04962991.1| glutamate racemase [Vibrio cholerae AM-19226]
gi|297581776|ref|ZP_06943697.1| glutamate racemase [Vibrio cholerae RC385]
gi|124120901|gb|EAY39644.1| glutamate racemase [Vibrio cholerae MZO-3]
gi|148873230|gb|EDL71365.1| glutamate racemase [Vibrio cholerae 623-39]
gi|150421862|gb|EDN13844.1| glutamate racemase [Vibrio cholerae AM-19226]
gi|229335333|gb|EEO00816.1| glutamate racemase [Vibrio cholerae 12129(1)]
gi|229350618|gb|EEO15562.1| glutamate racemase [Vibrio cholerae TMA 21]
gi|297533870|gb|EFH72710.1| glutamate racemase [Vibrio cholerae RC385]
gi|327483054|gb|AEA77461.1| Glutamate racemase [Vibrio cholerae LMA3894-4]
Length = 265
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLG--VEKGVGTNQKHQIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNINLEQLGFN 256
>gi|260557842|ref|ZP_05830055.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
gi|260408633|gb|EEX01938.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
Length = 266
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 10/268 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T
Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI Y + LV + LA ++E E+K ++
Sbjct: 120 ATTVKGKNLKSLIEMYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235
Query: 248 HALFLSGKP----DIAMRRLMQGFGLKS 271
H ++ S P D+ L + +K+
Sbjct: 236 HIIWTSSDPLEVADVTFSLLSEKLSVKA 263
>gi|153826314|ref|ZP_01978981.1| glutamate racemase [Vibrio cholerae MZO-2]
gi|149739982|gb|EDM54161.1| glutamate racemase [Vibrio cholerae MZO-2]
Length = 265
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLG--VEKGVDTNQKHQIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNINLEQLGFN 256
>gi|257056887|ref|YP_003134719.1| glutamate racemase [Saccharomonospora viridis DSM 43017]
gi|256586759|gb|ACU97892.1| glutamate racemase [Saccharomonospora viridis DSM 43017]
Length = 265
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P YV D + PYG +++ + ++
Sbjct: 9 APIGIFDSGVGGLTVARAVADQLPAERLRYVGDTLHAPYGPLPIARVRELALRALDGLVA 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + R + F +PA ++A A T++G + ++ T T+R
Sbjct: 69 DGVKAL-VIACNTASAACLRDARERYDIPVFEVVLPAARRAVATTRNGHVGLIGTEGTVR 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + V+ VE + +I +G D
Sbjct: 128 SRAYDDALA--ATGVRLSSVACPRFVEFVERGVTSGR----QILGLAQGYLEPLTRADVD 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFL 252
++L CTHYPL+ V + + V + +++ A+ +L ++ R +H
Sbjct: 182 TLILGCTHYPLLTGVLQTVMGPDVTLVSSAEETAKDVVRVLTELDLLADRDEPPEHEFIA 241
Query: 253 SGKPDIAMRRLMQGFGL 269
+G + + + GL
Sbjct: 242 TGPAEPFTKLARRFMGL 258
>gi|229525050|ref|ZP_04414455.1| glutamate racemase [Vibrio cholerae bv. albensis VL426]
gi|229338631|gb|EEO03648.1| glutamate racemase [Vibrio cholerae bv. albensis VL426]
Length = 265
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 81/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +L+TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLLATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLG--VEKGVGTNQKHQIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNINLEQLGFN 256
>gi|260580700|ref|ZP_05848527.1| glutamate racemase [Haemophilus influenzae RdAW]
gi|260092762|gb|EEW76698.1| glutamate racemase [Haemophilus influenzae RdAW]
Length = 269
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++
Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIH 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++
Sbjct: 57 RTLAACQLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSS 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232
Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + P+ + ++ + +G +S
Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262
>gi|170680254|ref|YP_001746359.1| glutamate racemase [Escherichia coli SMS-3-5]
gi|293407588|ref|ZP_06651507.1| glutamate racemase [Escherichia coli FVEC1412]
gi|298383336|ref|ZP_06992929.1| glutamate racemase [Escherichia coli FVEC1302]
gi|300896472|ref|ZP_07114999.1| hypothetical protein HMPREF9552_00793 [Escherichia coli MS 198-1]
gi|170517972|gb|ACB16150.1| glutamate racemase [Escherichia coli SMS-3-5]
gi|291425505|gb|EFE98544.1| glutamate racemase [Escherichia coli FVEC1412]
gi|298276370|gb|EFI17890.1| glutamate racemase [Escherichia coli FVEC1302]
gi|300359665|gb|EFJ75535.1| hypothetical protein HMPREF9552_00793 [Escherichia coli MS 198-1]
Length = 262
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQKRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|261210140|ref|ZP_05924437.1| glutamate racemase [Vibrio sp. RC341]
gi|260840680|gb|EEX67229.1| glutamate racemase [Vibrio sp. RC341]
Length = 265
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELAQETLIARVDALVTRMVEEE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI ++ + ++ L+ S L + EE G + DE++ + DV
Sbjct: 127 YTQELIRNFSANKNVELLGSTRLVNMAEEKLRGKPLDLDELESILHPL-----KHTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL + H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGVAIARRVQELLGIDKGKSSN--RKHQIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNIKLEQLGFN 256
>gi|187776066|ref|ZP_02800193.2| glutamate racemase [Escherichia coli O157:H7 str. EC4196]
gi|188494268|ref|ZP_03001538.1| glutamate racemase [Escherichia coli 53638]
gi|189010240|ref|ZP_02805903.2| glutamate racemase [Escherichia coli O157:H7 str. EC4076]
gi|189402183|ref|ZP_02780670.2| glutamate racemase [Escherichia coli O157:H7 str. EC4401]
gi|189403088|ref|ZP_02793288.2| glutamate racemase [Escherichia coli O157:H7 str. EC4486]
gi|189404032|ref|ZP_02786646.2| glutamate racemase [Escherichia coli O157:H7 str. EC4501]
gi|189404858|ref|ZP_02811842.2| glutamate racemase [Escherichia coli O157:H7 str. EC869]
gi|208807428|ref|ZP_03249765.1| glutamate racemase [Escherichia coli O157:H7 str. EC4206]
gi|208814014|ref|ZP_03255343.1| glutamate racemase [Escherichia coli O157:H7 str. EC4045]
gi|208818359|ref|ZP_03258679.1| glutamate racemase [Escherichia coli O157:H7 str. EC4042]
gi|209400751|ref|YP_002273491.1| glutamate racemase [Escherichia coli O157:H7 str. EC4115]
gi|217325108|ref|ZP_03441192.1| glutamate racemase [Escherichia coli O157:H7 str. TW14588]
gi|309783926|ref|ZP_07678571.1| glutamate racemase [Shigella dysenteriae 1617]
gi|30043002|gb|AAP18724.1| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|56384049|gb|AAN45478.2| glutamate racemase [Shigella flexneri 2a str. 301]
gi|187769174|gb|EDU33018.1| glutamate racemase [Escherichia coli O157:H7 str. EC4196]
gi|188489467|gb|EDU64570.1| glutamate racemase [Escherichia coli 53638]
gi|189001518|gb|EDU70504.1| glutamate racemase [Escherichia coli O157:H7 str. EC4076]
gi|189357222|gb|EDU75641.1| glutamate racemase [Escherichia coli O157:H7 str. EC4401]
gi|189362690|gb|EDU81109.1| glutamate racemase [Escherichia coli O157:H7 str. EC4486]
gi|189367934|gb|EDU86350.1| glutamate racemase [Escherichia coli O157:H7 str. EC4501]
gi|189373225|gb|EDU91641.1| glutamate racemase [Escherichia coli O157:H7 str. EC869]
gi|208727229|gb|EDZ76830.1| glutamate racemase [Escherichia coli O157:H7 str. EC4206]
gi|208735291|gb|EDZ83978.1| glutamate racemase [Escherichia coli O157:H7 str. EC4045]
gi|208738482|gb|EDZ86164.1| glutamate racemase [Escherichia coli O157:H7 str. EC4042]
gi|209162151|gb|ACI39584.1| glutamate racemase [Escherichia coli O157:H7 str. EC4115]
gi|217321329|gb|EEC29753.1| glutamate racemase [Escherichia coli O157:H7 str. TW14588]
gi|308928297|gb|EFP73759.1| glutamate racemase [Shigella dysenteriae 1617]
gi|313648865|gb|EFS13304.1| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|320173014|gb|EFW48236.1| Glutamate racemase [Shigella dysenteriae CDC 74-1112]
gi|320182828|gb|EFW57705.1| Glutamate racemase [Shigella flexneri CDC 796-83]
gi|320190929|gb|EFW65579.1| Glutamate racemase [Escherichia coli O157:H7 str. EC1212]
gi|323167446|gb|EFZ53154.1| glutamate racemase [Shigella sonnei 53G]
gi|326338013|gb|EGD61843.1| Glutamate racemase [Escherichia coli O157:H7 str. 1044]
gi|326342692|gb|EGD66465.1| Glutamate racemase [Escherichia coli O157:H7 str. 1125]
gi|332088274|gb|EGI93394.1| glutamate racemase [Shigella boydii 3594-74]
gi|332751534|gb|EGJ81933.1| glutamate racemase [Shigella flexneri 4343-70]
gi|332751805|gb|EGJ82202.1| glutamate racemase [Shigella flexneri K-671]
gi|332752573|gb|EGJ82959.1| glutamate racemase [Shigella flexneri 2747-71]
gi|332764484|gb|EGJ94716.1| glutamate racemase [Shigella flexneri 2930-71]
gi|332997949|gb|EGK17555.1| glutamate racemase [Shigella flexneri VA-6]
gi|332998392|gb|EGK17990.1| glutamate racemase [Shigella flexneri K-272]
gi|332998878|gb|EGK18472.1| glutamate racemase [Shigella flexneri K-218]
gi|333014084|gb|EGK33441.1| glutamate racemase [Shigella flexneri K-227]
Length = 262
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|86134483|ref|ZP_01053065.1| Asp/Glu/hydantoin racemase [Polaribacter sp. MED152]
gi|85821346|gb|EAQ42493.1| Asp/Glu/hydantoin racemase [Polaribacter sp. MED152]
Length = 263
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 7/257 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K QN I FDSGIGG + +++ L+P IY++D PYG ++ +
Sbjct: 1 MKANQNPIGFFDSGIGGTSIWKEVTALLPNESTIYLSDSKNAPYGTKNKDSILDLAIKNT 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+L+K L V+ACNTA T D LR+ + + F+G PAIK AA T++ I IL+T
Sbjct: 61 EFLLNK-NCKLIVVACNTATTNAIDYLRANYK-IPFIGIEPAIKPAALKTKTKRIGILAT 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + Q + L +EE KI E+++ +
Sbjct: 119 KGTLNSALFEKTASTIDQQIIVKETIGTGLVELIEEG----KIASKEMEQLLASYINPLV 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDD 247
+ D +VL CTHYP ++ ++++ ++ +D+ ++A++ + +L + + H
Sbjct: 175 KENIDCLVLGCTHYPYLIPAIQKITGNQLEIIDSGQAVAKQTKAILQQHDLMHNGSASAK 234
Query: 248 HALFLSGKPDIAMRRLM 264
H +++ + R L
Sbjct: 235 HEFYINKDKSVLERILS 251
>gi|301023753|ref|ZP_07187492.1| hypothetical protein HMPREF9534_03554 [Escherichia coli MS 69-1]
gi|300396897|gb|EFJ80435.1| hypothetical protein HMPREF9534_03554 [Escherichia coli MS 69-1]
Length = 262
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIITAVQKRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|145641879|ref|ZP_01797454.1| glutamate racemase [Haemophilus influenzae R3021]
gi|145273501|gb|EDK13372.1| glutamate racemase [Haemophilus influenzae 22.4-21]
Length = 269
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++
Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIH 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++
Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKSASEITKTKH 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 116 IGLLATKGTVKRHYVDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232
Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + P+ + ++ + +G +S
Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262
>gi|182678309|ref|YP_001832455.1| glutamate racemase [Beijerinckia indica subsp. indica ATCC 9039]
gi|182634192|gb|ACB94966.1| glutamate racemase [Beijerinckia indica subsp. indica ATCC 9039]
Length = 287
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 103/260 (39%), Positives = 154/260 (59%), Gaps = 6/260 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL V ++ L P+ ++Y ADD FPYG + AL R++ + ++ Y
Sbjct: 11 LIFDSGLGGLTVFAEILRLRPQADYLYAADDAAFPYGAMSEEALITRVLDVMGRLIASYA 70
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P VIACNTA TL+ LR+ +P + F+G VPA+K A ++S LIS+L+TP T+ R Y
Sbjct: 71 PDAVVIACNTASTLVLPHLRAAYPDLPFVGTVPAVKPAGEISRSHLISVLATPGTVARDY 130
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T L+ +Y S C + LV S LA E G + ++ I EI CF++ +G+RTD +V
Sbjct: 131 THELVRTYASHCAVTLVGSRKLAGLAEAMMKGESVPDEAIAHEIAPCFVDFDGRRTDCVV 190
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR----INTHQTRVFDDHA-LF 251
LACTH+PL+ F++L+PWPV+W+D + +IARR +L + + H F
Sbjct: 191 LACTHFPLLTDHFQRLAPWPVEWIDPAPAIARRLDYVLREELGFRSEGRVEEGVRHRVFF 250
Query: 252 LSGKP-DIAMRRLMQGFGLK 270
G P A+ +++ GL+
Sbjct: 251 TKGGPLSPALEAVLRMRGLE 270
>gi|119773335|ref|YP_926075.1| glutamate racemase [Shewanella amazonensis SB2B]
gi|119765835|gb|ABL98405.1| glutamate racemase [Shewanella amazonensis SB2B]
Length = 266
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 87/264 (32%), Positives = 138/264 (52%), Gaps = 6/264 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E L IL+FDSGIGGL VL ++R L+P F Y+ D+ PYG + L + L
Sbjct: 1 MEFGLARPILVFDSGIGGLSVLSEIRQLLPSNDFYYLFDNARLPYGELTEQVLVDGCVEL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
K L VIACNTA TL+ LRS ++ +G VPAIK AA++T SG I +L+
Sbjct: 61 VVSAATKINAALVVIACNTASTLVLPVLRSKL-TIPVVGVVPAIKPAASHTLSGHIGLLA 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT++R+YT L+ + S C +H+ S L E+ G+ + +++ G
Sbjct: 120 TPATVKRSYTHELVTKFASDCQVHMFGSSELVMMAEQKMAGVPVD----MEKLTGILAPI 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ + DV+VL CTH+P++ + Q+ + LD+ +IA R + +L + HQ +
Sbjct: 176 QATQVDVLVLGCTHFPMLAYELSQILGPGIKLLDSGFAIASRVQHVLEGLGEHQHPAPNS 235
Query: 248 H-ALFLSGKPDIAMRRLMQGFGLK 270
A + + + + + + +G
Sbjct: 236 MKAWYTTPSLTLGLIQSLTDYGFS 259
>gi|316935236|ref|YP_004110218.1| glutamate racemase [Rhodopseudomonas palustris DX-1]
gi|315602950|gb|ADU45485.1| glutamate racemase [Rhodopseudomonas palustris DX-1]
Length = 264
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 103/257 (40%), Positives = 152/257 (59%), Gaps = 4/257 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++
Sbjct: 5 PTILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L VIACNTA T+ LR+ + + F+G VPAIK A A +++ +S+L T AT+R
Sbjct: 65 AHAPDLVVIACNTASTMTLAPLRARYR-VPFVGTVPAIKPACARSRTKRVSVLGTSATVR 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG--KR 191
YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + R
Sbjct: 124 LEYTRALIRDFAQGCEVSLVGSVRLATLAETALGGGEVTDAAIRAEIAPCFVEADATRGR 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H + +F
Sbjct: 184 TDSVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGEATGHAASPKAEM-IF 242
Query: 252 LSGKPDIAMRRLMQGFG 268
SG+ A L FG
Sbjct: 243 TSGRQPRASAGLAPYFG 259
>gi|153217406|ref|ZP_01951157.1| glutamate racemase [Vibrio cholerae 1587]
gi|124113576|gb|EAY32396.1| glutamate racemase [Vibrio cholerae 1587]
Length = 265
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLG--VEKGVGTNQKHQIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNINLEQLGFN 256
>gi|289577814|ref|YP_003476441.1| glutamate racemase [Thermoanaerobacter italicus Ab9]
gi|289527527|gb|ADD01879.1| glutamate racemase [Thermoanaerobacter italicus Ab9]
Length = 264
Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 8/255 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + + +
Sbjct: 4 RPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMRE 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ VIACNT +I +S + + F + AA YT + I +++T T+
Sbjct: 64 QK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVE 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I ++ + +E+ I + C E + + D
Sbjct: 120 SKSYEKNIKIIDKNIKVYQKACPEFVPLIEKGLYNSPIAYET----ASNCLKELKERDID 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYPL++ V ++ V +D + +A + L R + + F+S
Sbjct: 176 TLVLGCTHYPLMMEVIEEIVGENVKIVDPAIKLAYDVKDYLLRRDLFNIQNIGKTKFFVS 235
Query: 254 GKPDIAMRRLMQGFG 268
G D ++ G
Sbjct: 236 GDKDNFIKTAEMLLG 250
>gi|262404892|ref|ZP_06081446.1| glutamate racemase [Vibrio sp. RC586]
gi|262348976|gb|EEY98115.1| glutamate racemase [Vibrio sp. RC586]
Length = 265
Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELAQETLIARVDALVTRMVEEE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI ++ + ++ L+ S L + EE G + DE++ + DV
Sbjct: 127 YTQELIRNFSANKNVELLGSTRLVNMAEEKLRGKPLDLDELESILHPL-----KHTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL + H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGVAIARRVQELLGIDKGESSN--RKHQIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNIKLEQLGFN 256
>gi|255009918|ref|ZP_05282044.1| putative glutamate racemase [Bacteroides fragilis 3_1_12]
gi|313147706|ref|ZP_07809899.1| glutamate racemase [Bacteroides fragilis 3_1_12]
gi|313136473|gb|EFR53833.1| glutamate racemase [Bacteroides fragilis 3_1_12]
Length = 280
Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPDYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKDELR-----STFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA ++ PS LG + P ++ + TQ+ + +L+
Sbjct: 70 -MGCHLVILACNTASAKALRTIQMNNLPDIDPSRRVLGVIRPTVECIGSITQTRHVGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + + + VE + + I+K I
Sbjct: 129 TAGTIKSESYPLEIHKLFPDIKVSGEACPMWVPLVENNEANGEGTDFFIRKYIHNLLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D I+L CTHYPL++ +Q P + + + +A + L R +
Sbjct: 187 KDGQIDTIILGCTHYPLLLPKIQQFVPQSMKVVAQGEYVAASLKDYLYRHPEMDRKCTRG 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + D +
Sbjct: 247 GSCSFCTTEAEDKFIE 262
>gi|330827753|ref|YP_004390705.1| glutamate racemase [Aeromonas veronii B565]
gi|328802889|gb|AEB48088.1| Glutamate racemase [Aeromonas veronii B565]
Length = 267
Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 12/265 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL + +++R ++P +++ Y D+ FPYG + AL L + ++
Sbjct: 2 ANILVFDSGMGGLTIYREIRRVLPAHNYFYCFDNANFPYGELSEPALIAACTRLVTTMVA 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++Q L VIACNTA T+ LR + +G VPAIK AAA T++G I +L+TP T+
Sbjct: 62 RHQIDLVVIACNTASTIALPALREAL-DIPVVGVVPAIKPAAAQTRNGCIGLLATPGTVS 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI + + L + L E G+ + +++ + + ++ D
Sbjct: 121 RDYTHELIAQFAPSKRVLLKGTTELVIEAEHKLSGLPVNMALLREVLADWL--EGEEKPD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL--- 250
+VL CTH+PL+ QL P + +D+ ++A+R LL + +
Sbjct: 179 TLVLGCTHFPLLNEEIGQLMPQCM-LIDSGSAVAKRVAWLLNNGGHAAVQSVHIEEVIAR 237
Query: 251 -FLS---GKPDIAMRRLMQGFGLKS 271
+ + G+ L Q +GL S
Sbjct: 238 AYCTRLDGEAQKLTAPL-QAWGLSS 261
>gi|163786500|ref|ZP_02180948.1| glutamate racemase [Flavobacteriales bacterium ALC-1]
gi|159878360|gb|EDP72416.1| glutamate racemase [Flavobacteriales bacterium ALC-1]
Length = 261
Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 7/260 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSGIGG + +++ L+P + IY+AD PYGN + + + +
Sbjct: 1 MSNTKKPIGIFDSGIGGTSIFKEIIALLPNENCIYLADSKNAPYGNKSEADILQLSIKN- 59
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+++L L V+ACNTA T LR+ + ++F+G PAIK AA TQS I IL+T
Sbjct: 60 TELLISKGCKLIVVACNTATTNAISYLRANY-DVSFIGIEPAIKPAALNTQSKSIGILAT 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL Y + + +E ++ DE+KK +E
Sbjct: 119 KGTLSSHLFHKTTDLYTDGIKVIEQVGEGIVPLIETGL----LESDEMKKLLETYLEPML 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247
+ D +VL CTHYP ++ + +++ P V +D+ ++A++ + +L + T
Sbjct: 175 KQNIDYLVLGCTHYPYLIPMLKKMLPEHVKIIDSGLAVAKQTQAVLATNSLLNTSNAQPA 234
Query: 248 HALFLSGKPDIAMRRLMQGF 267
L+ +G D+ L F
Sbjct: 235 INLYSNGDVDVLNSILENEF 254
>gi|260063790|ref|YP_003196870.1| glutamate racemase [Robiginitalea biformata HTCC2501]
gi|88783235|gb|EAR14408.1| glutamate racemase [Robiginitalea biformata HTCC2501]
Length = 257
Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 79/250 (31%), Positives = 122/250 (48%), Gaps = 7/250 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL + ++ L+P H IY+AD PYG A+ + +L++
Sbjct: 2 GVFDSGVGGLTIWHELVRLLPAEHTIYLADSANAPYGGQSPGAILELARKNTRWLLERG- 60
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L V+ACNTA T D LR+ FP + F+G PAIK AA ++SG I +L+T TL +
Sbjct: 61 CKLIVVACNTATTNAIDRLRAEFP-VPFIGIEPAIKPAALNSRSGKIGVLATRGTLSSSL 119
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
++ ++ S I + L R+E + E++ +E + D +V
Sbjct: 120 FASTSRNFGSGIEIVEQEGVDLVERIESAGP----DDPELRDILERLLKPMLLQGIDYLV 175
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGK 255
L CTHYPL+ L P V LD +AR++R +L R + H L +G
Sbjct: 176 LGCTHYPLLKPTLEHLLPEGVRILDCGLPVARQSRAILEREGLLRDAGGPVRHELLTNGD 235
Query: 256 PDIAMRRLMQ 265
P + + L+Q
Sbjct: 236 PGVMRQVLLQ 245
>gi|224825572|ref|ZP_03698677.1| glutamate racemase [Lutiella nitroferrum 2002]
gi|224602493|gb|EEG08671.1| glutamate racemase [Lutiella nitroferrum 2002]
Length = 266
Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 6/254 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V +++ L+P+ IY+AD PYG + R + ++++
Sbjct: 2 IGMFDSGLGGLSVWRELTRLLPQEPVIYLADRAYCPYGGRSHEDILARSEKITRYLVEQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA + ELR P + +G PA+K AA +++SG I++L+T ATL+
Sbjct: 62 A-RLIVIACNTATSAAARELRRRHPELPIVGMEPAVKPAALHSRSGQIAVLATRATLKGD 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L Y I + VE + ++ ++ +E D +
Sbjct: 121 KFLELKAQYDDSVDILPLPGDGFVELVENG----DLASEQAQRVVERQLQPLRAHTVDQV 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFLSG 254
VL CTHYP + + + P V +D + +++ +A LL R H +G
Sbjct: 177 VLGCTHYPFLSPLIERALPAGVKLIDPARAVSLQAERLLQRHGLSSPPGTVPAHRFVTTG 236
Query: 255 KPDIAMRRLMQGFG 268
+ L Q G
Sbjct: 237 EAPGMRHFLRQVLG 250
>gi|260582090|ref|ZP_05849885.1| glutamate racemase [Haemophilus influenzae NT127]
gi|260094980|gb|EEW78873.1| glutamate racemase [Haemophilus influenzae NT127]
Length = 269
Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 9/270 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++
Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIH 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++
Sbjct: 57 RTLAACQLINQRYLLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 176 W---ADMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQ 232
Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + P+ + ++ + +G +S
Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262
>gi|157883967|pdb|2JFN|A Chain A, Crystal Structure Of Escherichia Coli Glutamate Racemase
In Complex With L-Glutamate And Activator Udp-Murnac-Ala
Length = 267
Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 1 PRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAV 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T
Sbjct: 61 QERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 120 VKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP-- 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A
Sbjct: 178 PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFC 237
Query: 252 LSGKPD-IAMRRLMQGFGLKS 271
++ P + ++Q +G ++
Sbjct: 238 MAMTPGAEQLLPVLQRYGFET 258
>gi|15640188|ref|NP_229815.1| glutamate racemase [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591662|ref|ZP_01678900.1| glutamate racemase [Vibrio cholerae 2740-80]
gi|147673599|ref|YP_001218240.1| glutamate racemase [Vibrio cholerae O395]
gi|227080392|ref|YP_002808943.1| glutamate racemase [Vibrio cholerae M66-2]
gi|229508432|ref|ZP_04397936.1| glutamate racemase [Vibrio cholerae BX 330286]
gi|229508887|ref|ZP_04398377.1| glutamate racemase [Vibrio cholerae B33]
gi|229517001|ref|ZP_04406447.1| glutamate racemase [Vibrio cholerae RC9]
gi|229606705|ref|YP_002877353.1| glutamate racemase [Vibrio cholerae MJ-1236]
gi|254851543|ref|ZP_05240893.1| glutamate racemase [Vibrio cholerae MO10]
gi|255743894|ref|ZP_05417849.1| glutamate racemase [Vibrio cholera CIRS 101]
gi|262166982|ref|ZP_06034700.1| glutamate racemase [Vibrio cholerae RC27]
gi|298501081|ref|ZP_07010881.1| glutamate racemase [Vibrio cholerae MAK 757]
gi|11386939|sp|Q9KVI7|MURI_VIBCH RecName: Full=Glutamate racemase
gi|172047523|sp|A5F4P4|MURI_VIBC3 RecName: Full=Glutamate racemase
gi|254766132|sp|C3LPZ8|MURI_VIBCM RecName: Full=Glutamate racemase
gi|9654559|gb|AAF93334.1| glutamate racemase [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121546478|gb|EAX56698.1| glutamate racemase [Vibrio cholerae 2740-80]
gi|146315482|gb|ABQ20021.1| glutamate racemase [Vibrio cholerae O395]
gi|227008280|gb|ACP04492.1| glutamate racemase [Vibrio cholerae M66-2]
gi|227011822|gb|ACP08032.1| glutamate racemase [Vibrio cholerae O395]
gi|229346064|gb|EEO11036.1| glutamate racemase [Vibrio cholerae RC9]
gi|229354004|gb|EEO18937.1| glutamate racemase [Vibrio cholerae B33]
gi|229354705|gb|EEO19627.1| glutamate racemase [Vibrio cholerae BX 330286]
gi|229369360|gb|ACQ59783.1| glutamate racemase [Vibrio cholerae MJ-1236]
gi|254847248|gb|EET25662.1| glutamate racemase [Vibrio cholerae MO10]
gi|255738377|gb|EET93767.1| glutamate racemase [Vibrio cholera CIRS 101]
gi|262024566|gb|EEY43249.1| glutamate racemase [Vibrio cholerae RC27]
gi|297540115|gb|EFH76176.1| glutamate racemase [Vibrio cholerae MAK 757]
Length = 265
Score = 279 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E+ ++ DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQPL-----KNTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGI--EQAVGAKQKHRIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNIKLEQLGFN 256
>gi|28378862|ref|NP_785754.1| glutamate racemase [Lactobacillus plantarum WCFS1]
gi|254557068|ref|YP_003063485.1| glutamate racemase [Lactobacillus plantarum JDM1]
gi|38258032|sp|Q88V19|MURI_LACPL RecName: Full=Glutamate racemase
gi|28271699|emb|CAD64605.1| glutamate racemase [Lactobacillus plantarum WCFS1]
gi|254045995|gb|ACT62788.1| glutamate racemase [Lactobacillus plantarum JDM1]
Length = 273
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+++I DSG+GGL V+++ +P ++ D PYG ++ + ++
Sbjct: 4 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRTFSFQMADFLM 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K Q + VIACNTA LR S+ +G + P + A + I +++T T
Sbjct: 64 AK-QIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + I + + + VE + K+ + + + +
Sbjct: 122 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVA----KRVVAETLKQLKKQD 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D +VL CTHYPL+ + + + V +D+ +L ++ R +
Sbjct: 178 VDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIANDRSTKRYPDE 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ +G D G
Sbjct: 238 YYTTGAADQFEAIARNWLG 256
>gi|254502214|ref|ZP_05114365.1| glutamate racemase [Labrenzia alexandrii DFL-11]
gi|222438285|gb|EEE44964.1| glutamate racemase [Labrenzia alexandrii DFL-11]
Length = 260
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 114/247 (46%), Positives = 160/247 (64%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL VL++ R+L+P +YVADD FP G W + L RL F+ +++ + P VI
Sbjct: 1 MGGLTVLREARYLLPCERLLYVADDAAFPIGRWPEEDLLVRLQDQFTRLIEDHDPKAVVI 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTAFTL LR FP + F+G VPAIK AA T SGLIS+L+TP T+RR YT +LI
Sbjct: 61 ACNTAFTLGGVALREAFPGVPFVGTVPAIKPAAERTASGLISVLATPGTVRRAYTRSLIE 120
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
S+ +QCH+ LV S LA E++ G + ++ + EI CF+E+ G+RTD++VLACTHY
Sbjct: 121 SFAAQCHVRLVGSDNLAELAEQHLRGEPVSDEALLPEISDCFLEQNGQRTDIVVLACTHY 180
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
P + + FR+++PWPVDWLD +++IAR+ +L + D A+ SG A+ R
Sbjct: 181 PFLANRFRKIAPWPVDWLDPAEAIARQLVRVLGQDLASVPSESPDLAILTSGARKPAIER 240
Query: 263 LMQGFGL 269
L+ GFGL
Sbjct: 241 LLAGFGL 247
>gi|228984040|ref|ZP_04144229.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228775720|gb|EEM24097.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 284
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 15 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNT S+ +G + P + A T+ G I ++ T T
Sbjct: 74 KQFPLKALVVACNT-AAAAALAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE +++K+ + +
Sbjct: 133 IKSNMYEKALHELDTYLEVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTEED 188
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 189 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 248
Query: 252 LSGKPDIAMRRLMQGFGL 269
+G + G
Sbjct: 249 TTGSALSFEHIAERWLGY 266
>gi|227885282|ref|ZP_04003087.1| glutamate racemase [Escherichia coli 83972]
gi|300975977|ref|ZP_07173249.1| hypothetical protein HMPREF9531_01194 [Escherichia coli MS 45-1]
gi|301048608|ref|ZP_07195621.1| hypothetical protein HMPREF9549_02631 [Escherichia coli MS 185-1]
gi|227837734|gb|EEJ48200.1| glutamate racemase [Escherichia coli 83972]
gi|300299528|gb|EFJ55913.1| hypothetical protein HMPREF9549_02631 [Escherichia coli MS 185-1]
gi|300410167|gb|EFJ93705.1| hypothetical protein HMPREF9531_01194 [Escherichia coli MS 45-1]
gi|307556119|gb|ADN48894.1| glutamate racemase [Escherichia coli ABU 83972]
gi|312948550|gb|ADR29377.1| glutamate racemase [Escherichia coli O83:H1 str. NRG 857C]
gi|315292669|gb|EFU52021.1| hypothetical protein HMPREF9544_02904 [Escherichia coli MS 153-1]
gi|320196758|gb|EFW71380.1| Glutamate racemase [Escherichia coli WV_060327]
gi|323190167|gb|EFZ75445.1| glutamate racemase [Escherichia coli RN587/1]
gi|324006695|gb|EGB75914.1| hypothetical protein HMPREF9532_03634 [Escherichia coli MS 57-2]
gi|330908292|gb|EGH36811.1| glutamate racemase [Escherichia coli AA86]
Length = 262
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|191172716|ref|ZP_03034254.1| glutamate racemase [Escherichia coli F11]
gi|300986811|ref|ZP_07177801.1| hypothetical protein HMPREF9553_03017 [Escherichia coli MS 200-1]
gi|190907020|gb|EDV66621.1| glutamate racemase [Escherichia coli F11]
gi|300306388|gb|EFJ60908.1| hypothetical protein HMPREF9553_03017 [Escherichia coli MS 200-1]
gi|315289655|gb|EFU49048.1| hypothetical protein HMPREF9539_00329 [Escherichia coli MS 110-3]
gi|324012464|gb|EGB81683.1| hypothetical protein HMPREF9533_03508 [Escherichia coli MS 60-1]
Length = 262
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|110597807|ref|ZP_01386090.1| Glutamate racemase [Chlorobium ferrooxidans DSM 13031]
gi|110340532|gb|EAT59015.1| Glutamate racemase [Chlorobium ferrooxidans DSM 13031]
Length = 272
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 65/258 (25%), Positives = 108/258 (41%), Gaps = 8/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I IFDSGIGGL V++ +R +P IY D PYG ++K + I
Sbjct: 8 PESPIGIFDSGIGGLTVVKAIRAALPSERLIYFGDTARVPYGPKSQITIRKYAAD-DTAI 66
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130
L +YQP L ++ACNT L D + + + +G + A + A T + I ++ T A
Sbjct: 67 LMRYQPKLIIVACNTVSALALDVVEKSCSGIPVIGVLKAGAELAVQVTGNNRIGVIGTQA 126
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + I+ + + + + EE I K E
Sbjct: 127 TVCSNAYAREINLLNEESAVVSKACPLFVPLAEEGF----IDHPATKLIAGEYLAEIRKH 182
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-A 249
D +VL CTHYP++ V + + +D+++++A + + LL
Sbjct: 183 DIDTLVLGCTHYPILKRVIADIVGPGIRIIDSAEAVALKTKELLTESALLNAAATPSVPH 242
Query: 250 LFLSGKPDIAMRRLMQGF 267
L +S P + L Q F
Sbjct: 243 LLVSDLPQKFSQ-LYQLF 259
>gi|56477960|ref|YP_159549.1| glutamate racemase [Aromatoleum aromaticum EbN1]
gi|56314003|emb|CAI08648.1| Glutamate racemase (EC 5.1.1.3), gene: MURI OR GLR OR NMA2026 OR
NMB0458 [Aromatoleum aromaticum EbN1]
Length = 267
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 7/260 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
I +FDSGIGGL V++ + +P H +Y D PYG ++ +
Sbjct: 2 NSSRPIGVFDSGIGGLTVVRALMERLPLEHIVYFGDTARVPYGVKSVATIRHFTEQITDF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTP 129
+L + + ++ACNT + + +R S+ L + A QAA A ++S I ++ TP
Sbjct: 62 LL-QQDVKMLIVACNTMAAVAAETVRQRAGSIPVLDVIEAGAQAAVAQSRSRGIGVIGTP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + IH+ S ++ + + VEE + ++ ++ E
Sbjct: 121 TTVNSNAYARRIHALDSGARVYSQACPLFVPLVEEGWLDHPVTRLTAQEYLKPVLAE--- 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DH 248
D +VL CTHYPL+ + R + V +D++ + A A L + T + +
Sbjct: 178 -EVDSLVLGCTHYPLLKPLLRDVVGPGVRLVDSALTTAELAAAKLHALGLANTHPGEATY 236
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
++ P + G
Sbjct: 237 RFVVTDVPLRFQTIGERFLG 256
>gi|300866341|ref|ZP_07111042.1| Glutamate racemase [Oscillatoria sp. PCC 6506]
gi|300335646|emb|CBN56202.1| Glutamate racemase [Oscillatoria sp. PCC 6506]
Length = 288
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 99/257 (38%), Gaps = 9/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I IFDSG+GGL VL+++ +P +Y D PYG + + + + L
Sbjct: 7 QQRIGIFDSGVGGLTVLRELYRQLPGESILYFGDTARLPYGTRSAGEITHFVREIMA-WL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ ++ACNT+ L + +++ F + LG + P + A Q I +++TPAT
Sbjct: 66 RSLNVKMVIMACNTSSALALETVQAEF-DIPILGVILPGARAAVQ--QGKRIGVIATPAT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I + V +E+ +I + + ++
Sbjct: 123 AASNAYRRAILEMDVNSQVWQVGCPEFVPLIEQN----RIYDPYTLEVAREYLAPLIQQQ 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +V CTHYP + V R L V +D + + A L +
Sbjct: 179 IDTLVYGCTHYPHLAPVVRSLLHAGVKLVDPAVHVVAAAAQELELLGLRNNGPVMPTRFC 238
Query: 252 LSGKPDIAMRRLMQGFG 268
+SG P+ +Q G
Sbjct: 239 VSGCPEQFAELSVQWLG 255
>gi|291523945|emb|CBK89532.1| glutamate racemase [Eubacterium rectale DSM 17629]
Length = 258
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++
Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLEQVRALTCEHAKELILN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R
Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y I + L + VE + D++++ +E D
Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+VL CTHYP + + +++ V D + AR + L
Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMKRRLAEKGLLTDSTA 228
>gi|258651923|ref|YP_003201079.1| glutamate racemase [Nakamurella multipartita DSM 44233]
gi|258555148|gb|ACV78090.1| glutamate racemase [Nakamurella multipartita DSM 44233]
Length = 301
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P YV D PYG +++ + + ++D
Sbjct: 38 APIGIFDSGVGGLTVARAIIDQLPGERVRYVGDTANGPYGPLPIAEVRRHALAVGDRLVD 97
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ VIACNTA + R + PA+++A A T++G + ++ T AT+
Sbjct: 98 SG-VKILVIACNTASAACLADARERYDVPVVEVIRPAVRRAIAATRTGEVGVIGTSATIA 156
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +H V+ VE + ++ + + D
Sbjct: 157 SGAYQDAFD-VNPGVRVHAVACPSFVDFVERGITSGR----QVIGLAQAYLGPLQRTNLD 211
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHALF 251
+VL CTHYPL+ + V + ++D A+ L ++ TR H
Sbjct: 212 TLVLGCTHYPLLTGALSLVMGDQVTLVSSADETAKDVYRKLTELDLLAPGTRPSAPHEFL 271
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P + + G
Sbjct: 272 ATGDPAPFTKLGRRFLG 288
>gi|308181062|ref|YP_003925190.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308046553|gb|ADN99096.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 273
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+++I DSG+GGL V+++ +P ++ D PYG ++ + ++
Sbjct: 4 EHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRTFSFQMADFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K Q + VIACNTA LR S+ +G + P + A + I +++T T
Sbjct: 64 AK-QIKMLVIACNTATAAALPALRQQL-SIPVIGVIAPGSRAALKASHRNRIGVIATEGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + I + + + VE + K+ + + + +
Sbjct: 122 IRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTVA----KRVVAETLKQLKKQD 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--A 249
D +VL CTHYPL+ + + + V +D+ +L ++ R +
Sbjct: 178 VDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIANDRSTKRYPDE 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ +G D G
Sbjct: 238 YYTTGAADQFEAIARNWLG 256
>gi|332873348|ref|ZP_08441302.1| glutamate racemase [Acinetobacter baumannii 6014059]
gi|323519838|gb|ADX94219.1| glutamate racemase [Acinetobacter baumannii TCDC-AB0715]
gi|332738411|gb|EGJ69284.1| glutamate racemase [Acinetobacter baumannii 6014059]
Length = 266
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 10/268 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNNNSPIGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T
Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E E+K ++
Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235
Query: 248 HALFLSGKP----DIAMRRLMQGFGLKS 271
H ++ S P D+ L + +K+
Sbjct: 236 HIIWTSSDPLEVADVTFSLLSEKLSVKA 263
>gi|39934662|ref|NP_946938.1| glutamate racemase [Rhodopseudomonas palustris CGA009]
gi|39648512|emb|CAE27033.1| putative glutamate racemase [Rhodopseudomonas palustris CGA009]
Length = 264
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 104/257 (40%), Positives = 152/257 (59%), Gaps = 4/257 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++
Sbjct: 5 PTILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L VIACNTA T+ LR+ + + F+G VPAIK A A +++ +S+L T AT+R
Sbjct: 65 AHAPDLVVIACNTASTMTLAPLRARYR-VPFVGTVPAIKPACAGSRTKRVSVLGTSATVR 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--R 191
YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + K R
Sbjct: 124 LEYTRALIRDFAQGCEVSLVGSIRLATLAETALGGGEVTDAAIRAEIAPCFVEADAKRGR 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F
Sbjct: 184 TDAVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGPATGHAP-TPGAEMIF 242
Query: 252 LSGKPDIAMRRLMQGFG 268
SG+ A L FG
Sbjct: 243 TSGRHPRASAALAPYFG 259
>gi|213159142|ref|YP_002321140.1| glutamate racemase [Acinetobacter baumannii AB0057]
gi|213058302|gb|ACJ43204.1| glutamate racemase [Acinetobacter baumannii AB0057]
Length = 266
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 6/249 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T
Sbjct: 61 SNLVTQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E E+K +E
Sbjct: 120 ATTVKGQKLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----YTAEVKDYLENILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + +++ + ++ S+++ A+ R L ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLNSESPNEGN 235
Query: 248 HALFLSGKP 256
H ++ S P
Sbjct: 236 HIIWTSSDP 244
>gi|284928811|ref|YP_003421333.1| glutamate racemase [cyanobacterium UCYN-A]
gi|284809270|gb|ADB94975.1| glutamate racemase [cyanobacterium UCYN-A]
Length = 281
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 9/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V Q++ L+P+ +Y AD+ PYGN + + + + + +
Sbjct: 8 PIGIFDSGVGGLTVFQEIHKLLPQESILYFADNARLPYGNRSSTEILQFVREILNWM-SY 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ ++V+ACNT+ L + +R F + LG V P + A Y+ + ++ST AT +
Sbjct: 67 SKVKMAVMACNTSSALALEAVRKEF-NFPILGVVLPGARAATKYSH--RVGVISTLATAK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + V L +E ++ +KK I K D
Sbjct: 124 SDSYRQAIQEINPNIKVWQVGCPELVPLIERDKIYDFHTQEILKKYINPLL----EKNID 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++ CTHY + + + + P+ ++ +D + +A+ + L ++ + + ++
Sbjct: 180 TLIYGCTHYRHLEEIIKNIIPYKIELIDPAYYVAQSVKKELEIMSLRKRSPGFNVRFVVT 239
Query: 254 GKPDIAMRRLMQGFGL 269
G P R + G
Sbjct: 240 GSPKNFSRLSKKCLGY 255
>gi|148825723|ref|YP_001290476.1| glutamate racemase [Haemophilus influenzae PittEE]
gi|229846914|ref|ZP_04467020.1| glutamate racemase [Haemophilus influenzae 7P49H1]
gi|166231037|sp|A5UBE2|MURI_HAEIE RecName: Full=Glutamate racemase
gi|148715883|gb|ABQ98093.1| glutamate racemase [Haemophilus influenzae PittEE]
gi|229809998|gb|EEP45718.1| glutamate racemase [Haemophilus influenzae 7P49H1]
Length = 269
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 5/264 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY E+ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSEREEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AG 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYNQ 238
Query: 249 ALFLSGKPDIA-MRRLMQGFGLKS 271
+ P+ + ++ + +G +S
Sbjct: 239 MFCTAHFPEESQFKKALHLWGFES 262
>gi|319776733|ref|YP_004139221.1| glutamate racemase [Haemophilus influenzae F3047]
gi|329123156|ref|ZP_08251726.1| glutamate racemase [Haemophilus aegyptius ATCC 11116]
gi|317451324|emb|CBY87562.1| glutamate racemase [Haemophilus influenzae F3047]
gi|327471711|gb|EGF17153.1| glutamate racemase [Haemophilus aegyptius ATCC 11116]
Length = 269
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 9/270 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++
Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIH 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++
Sbjct: 57 RTLAACQLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSS 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232
Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + P+ + ++ + +G +S
Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262
>gi|331005029|ref|ZP_08328434.1| Glutamate racemase [gamma proteobacterium IMCC1989]
gi|330421157|gb|EGG95418.1| Glutamate racemase [gamma proteobacterium IMCC1989]
Length = 273
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 81/246 (32%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL +LQ++R P F Y +D+ FPYG + L +R+ + +
Sbjct: 7 ILVFDSGVGGLSILQEIRRQYPHCCFFYASDNAAFPYGTKTEEELIERVDIVLHTLQQTT 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q + V+ACNTA T+ +R F +G VPAIK AAA +QS +I +L+TP T++R
Sbjct: 67 QADIIVVACNTASTVALPRIRERFSQ-PVIGVVPAIKPAAALSQSKVIGVLATPGTVKRK 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + C + + + L E+ G I + +++ ++ D +
Sbjct: 126 YTQQLIAQFAEDCEVISIGTSELVHLAEQKLRGETITQQQLEPIVQRLI---HNSAIDTV 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDHALFL 252
VLACTH+PL+ + P W+D+ ++IARR L +N D A F
Sbjct: 183 VLACTHFPLLKKELQTALPNIKHWIDSGEAIARRVGYWLDTLNIDLGDHASNTDSTAYFT 242
Query: 253 SGKPDI 258
+ P+I
Sbjct: 243 AQSPNI 248
>gi|90414704|ref|ZP_01222675.1| glutamate racemase [Photobacterium profundum 3TCK]
gi|90324246|gb|EAS40821.1| glutamate racemase [Photobacterium profundum 3TCK]
Length = 263
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 6/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +ILIFDSG+GGL V Q+++ LMP+ +IY D+ FPYG + L +R + +
Sbjct: 1 MVKTILIFDSGVGGLSVYQEIQSLMPQIQYIYAFDNAAFPYGELAEDVLLQRTQRIVCSL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+K+ L VIACNTA T++ LR S+ +G VPAIK AA +Q+ +I +L+TPAT
Sbjct: 61 AEKHNVDLVVIACNTASTIVLPILRENL-SVPVVGVVPAIKPAAILSQTKVIGLLATPAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R+YT LI S+ S C + ++ S L EE G+ + DEI + I+ K
Sbjct: 120 IHRSYTHELISSFASDCEVRMIGSTRLVEIAEEKLRGLPVSIDEIAEIIKPW-----QKD 174
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D I+L CTH+PLI RQ + +D+ +IA R + LL + + + +
Sbjct: 175 VDCIILGCTHFPLIKDEIRQALDKAIVIVDSGKAIANRVKGLLGDLPSSYKKHLNLTYNS 234
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
+ + A+ R ++ L +
Sbjct: 235 AATNNEAALNRSLEKIQLNA 254
>gi|291541513|emb|CBL14623.1| glutamate racemase [Ruminococcus bromii L2-63]
Length = 272
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 95/248 (38%), Gaps = 4/248 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q++I +FDSG+GGL +++ ++P IY D PYGN + K + + +L
Sbjct: 4 QDAIGVFDSGLGGLSAVKEFLHVLPNEKIIYFGDTGRVPYGNRSRETISKYALQDANFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K+ V AC T ++ D L P A T++G I I+ T AT+
Sbjct: 64 -KHNVKTVVAACGTVSSVAGDMLEEKLSVPYTGVVNPTAFIADQKTKNGKIGIIGTAATI 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + ++ + + VE + ++ I E +
Sbjct: 123 SSHSYKLRLEKLNPKYKVYEQACPLFVPLVENGFICR--DDQIVRLVIRRYLSELKETGV 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D ++L CTHYPL+ V +D+ A +L N T V +
Sbjct: 181 DTLILGCTHYPLLRDAIADFMGDGVTLVDSGYETAIYCSKILRENNLLNTDGVHQTPEFY 240
Query: 252 LSGKPDIA 259
+S PD
Sbjct: 241 VSDTPDGF 248
>gi|229195184|ref|ZP_04321959.1| Glutamate racemase [Bacillus cereus m1293]
gi|228588413|gb|EEK46456.1| Glutamate racemase [Bacillus cereus m1293]
Length = 284
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 15 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNT S+ +G + P + A T+ G I ++ T T
Sbjct: 74 KQFPLKALVVACNT-AAAAALAALQEALSVPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE +++K+ + +
Sbjct: 133 IKSNMYEKALHELDTYLEVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTEED 188
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 189 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 248
Query: 252 LSGKPDIAMRRLMQGFGL 269
+G + G
Sbjct: 249 TTGSALSFEHIAERWLGY 266
>gi|86739585|ref|YP_479985.1| glutamate racemase [Frankia sp. CcI3]
gi|86566447|gb|ABD10256.1| glutamate racemase [Frankia sp. CcI3]
Length = 300
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 104/257 (40%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL V + + +P +Y+ D PYG +++ + ++D
Sbjct: 4 APIGVFDSGVGGLTVARAILDQLPHEPLMYLGDTARAPYGPRRIAEVRRYALDALDRLVD 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA + R + +PA ++AAA T+SG + ++ T AT+
Sbjct: 64 EG-VKLLVIACNTASAACLRDARERYDIPVIEVIMPATRRAAAATRSGRVGVIGTLATIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + + VE + ++ E + D
Sbjct: 123 SRAYDDAFTA-AAGVELTGAACPAFVDFVERGITCGR----QLLGLTEAYLAPLQEANVD 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALF 251
++L CTHYPL+ V + V + +++ A+ +L R + H
Sbjct: 178 TVILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLVRHGLFRDPDLPPPTHRFL 237
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P + R + G
Sbjct: 238 TTGDPTLFSRVGRRFLG 254
>gi|156935905|ref|YP_001439821.1| glutamate racemase [Cronobacter sakazakii ATCC BAA-894]
gi|156534159|gb|ABU78985.1| hypothetical protein ESA_03799 [Cronobacter sakazakii ATCC BAA-894]
Length = 253
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 76/249 (30%), Positives = 132/249 (53%), Gaps = 4/249 (1%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y L+VI
Sbjct: 1 MGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVEIVTAVQARYPLALAVI 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACN+A T+ LR F + +G VPAIK AA T +G++ +L+T T++R YT LI
Sbjct: 61 ACNSASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGMVGLLATRGTVKRPYTHELIA 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++C I ++ S L E G + + +++ + E D +VL CTH+
Sbjct: 120 RFANECQIEMLGSAELVEIAEAKLHGEPVSLEALRRVLRPWLRMPEP--PDTVVLGCTHF 177
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA-MR 261
PL+ Q+ P +D+ +IARR LL ++ A ++ P++A +
Sbjct: 178 PLLAEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDACSSDENIAYCMALTPEVAQLM 237
Query: 262 RLMQGFGLK 270
++Q +G
Sbjct: 238 SVLQRYGFN 246
>gi|299768328|ref|YP_003730354.1| glutamate racemase [Acinetobacter sp. DR1]
gi|298698416|gb|ADI88981.1| glutamate racemase [Acinetobacter sp. DR1]
Length = 266
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 6/249 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T
Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E +E+K +E
Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTEEVKDYLENILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYKLSSESPNEGN 235
Query: 248 HALFLSGKP 256
H ++ S P
Sbjct: 236 HIIWTSSDP 244
>gi|312965372|ref|ZP_07779605.1| glutamate racemase [Escherichia coli 2362-75]
gi|312290046|gb|EFR17933.1| glutamate racemase [Escherichia coli 2362-75]
Length = 262
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 137/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQKRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + + C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANACQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|221198503|ref|ZP_03571549.1| glutamate racemase [Burkholderia multivorans CGD2M]
gi|221208547|ref|ZP_03581548.1| glutamate racemase [Burkholderia multivorans CGD2]
gi|221171538|gb|EEE03984.1| glutamate racemase [Burkholderia multivorans CGD2]
gi|221182435|gb|EEE14836.1| glutamate racemase [Burkholderia multivorans CGD2M]
Length = 292
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 73/264 (27%), Positives = 114/264 (43%), Gaps = 15/264 (5%)
Query: 1 MKIDNYPCEKKLQN-------SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53
M + P + I IFDSG+GGL VL+ +R +P F+YVAD PYG
Sbjct: 1 MTMTISPSAAEAHRTASAAAAPIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYG 60
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+D + +R + + ++++ L V+ACNTA +R ++ +G P IK
Sbjct: 61 ERDDAFITERTLAIGEWLVEQRAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKP 118
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
A + SG++ +L+T ATLR L+ + + C L VE G
Sbjct: 119 AVEQSASGVVGVLATQATLRSARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----S 174
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
++ ++G D IVL CTHYP + R L + +D SD+IAR+ +
Sbjct: 175 PALRALLDGYLKPMLDAGADTIVLGCTHYPFLTTAIRGLIGERMTIVDTSDAIARQLARV 234
Query: 234 LPRIN--THQTRVFDDHALFLSGK 255
L + T +G
Sbjct: 235 LEQHGLRTPAGMPAAAPRFCSTGD 258
>gi|260913044|ref|ZP_05919526.1| glutamate racemase [Pasteurella dagmatis ATCC 43325]
gi|260632631|gb|EEX50800.1| glutamate racemase [Pasteurella dagmatis ATCC 43325]
Length = 269
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 139/259 (53%), Gaps = 5/259 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +IL FDSG+GG V ++ + L+P H++Y D+ FPY + + +R++ + DI
Sbjct: 6 QPTILFFDSGMGGFSVYKETKQLLPNCHYLYCFDNAFFPYSEKTEKKIIERVLMICQDIN 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
KY L VIACNTA T++ LR+ F S+ +G VPAIK AA ++++ I +L+T T+
Sbjct: 66 SKYPLDLIVIACNTASTVVLPSLRAHF-SIPIVGTVPAIKPAAEHSETKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+Y +NLI Y C + + S L E+ G + +K+E++ +
Sbjct: 125 KRSYVANLISQYAGDCIVEKIGSTKLVEIAEQKLHGKAVDLVALKEELKLW---ENIVDL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV+VL CTH+PLI P ++D+ +IA R + LL +I ++ +
Sbjct: 182 DVVVLGCTHFPLIKEEIEWCLPQVRLFIDSGKAIALRVKHLLSKIEVRSKKMEKNLIFCT 241
Query: 253 -SGKPDIAMRRLMQGFGLK 270
S ++ +R++ +G +
Sbjct: 242 QSFDDEVDFQRVLNFWGFE 260
>gi|188996911|ref|YP_001931162.1| glutamate racemase [Sulfurihydrogenibium sp. YO3AOP1]
gi|229486280|sp|B2V9I5|MURI_SULSY RecName: Full=Glutamate racemase
gi|188931978|gb|ACD66608.1| glutamate racemase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 260
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 12/248 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSGIGGL V +++ P+ Y+ D PYGN + + + S +
Sbjct: 2 PIGIFDSGIGGLTVFKEIAASFPKVDLYYLGDTARVPYGNKSKTTIIRYSVECASYLYHN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
Y VIACNTA + D LR P + +G V P + A +++ I ++ T AT++
Sbjct: 62 YNVDAIVIACNTASSYALDTLREILP-IPVIGVVQPGAESAVKVSKNKKIGVIGTSATIK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S I+ + + VEE ++ + +K+ ++ + D
Sbjct: 121 SNSYFETLKSLDKDLEIYQKACPLFVPLVEEGWIDNEVAKLTVKEYLD----DLVKTGID 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYPL+ + + L P ++ +D+S +I + + ++N +T +F++
Sbjct: 177 TLILGCTHYPLLKNTIKGLYP-HLNIVDSSVAIVEHLKNI--KLNIEET---GKRKIFIT 230
Query: 254 GKPDIAMR 261
+ +
Sbjct: 231 DESHAFDK 238
>gi|145633451|ref|ZP_01789181.1| glutamate racemase [Haemophilus influenzae 3655]
gi|229845418|ref|ZP_04465548.1| glutamate racemase [Haemophilus influenzae 6P18H1]
gi|144986014|gb|EDJ92616.1| glutamate racemase [Haemophilus influenzae 3655]
gi|229811614|gb|EEP47313.1| glutamate racemase [Haemophilus influenzae 6P18H1]
Length = 269
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++
Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIH 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++
Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKSASEITKTKH 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 116 IGLLATKGTVKRHYVDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 176 W---AGTADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQ 232
Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + P+ + ++ + +G +S
Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262
>gi|297544101|ref|YP_003676403.1| glutamate racemase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841876|gb|ADH60392.1| glutamate racemase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 264
Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 8/255 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + + +
Sbjct: 4 RPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMRE 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ VIACNT +I +S + + F + AA YT + I +++T T+
Sbjct: 64 QK-VKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVE 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I ++ + +E+ I + C E + D
Sbjct: 120 SKSYEKNIKIIDKNIKVYQKACPEFVPLIEKGLYNSPIAFET----ASNCLKELRERDID 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYPL++ V ++ V +D + +A + L R + + F+S
Sbjct: 176 TLVLGCTHYPLMMEVIEEIVGENVKIVDPAIKLAYDVKDYLLRRDLFNIQNIGKTKFFVS 235
Query: 254 GKPDIAMRRLMQGFG 268
G D ++ G
Sbjct: 236 GDKDNFIKTAEMLLG 250
>gi|309972870|gb|ADO96071.1| Glutamate racemase [Haemophilus influenzae R2846]
Length = 269
Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 74/264 (28%), Positives = 131/264 (49%), Gaps = 5/264 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QIINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AG 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYNQ 238
Query: 249 ALFLSGKPDIA-MRRLMQGFGLKS 271
+ P+ + ++ + +G +S
Sbjct: 239 MFCTAHFPEESQFKKALHLWGFES 262
>gi|258626053|ref|ZP_05720908.1| glutamate racemase [Vibrio mimicus VM603]
gi|258581673|gb|EEW06567.1| glutamate racemase [Vibrio mimicus VM603]
Length = 265
Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDALVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 QIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E++ + DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELENILHPL-----KHTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGI--DKGEGENQKHHIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNIKLKELGFN 256
>gi|146313651|ref|YP_001178725.1| glutamate racemase [Enterobacter sp. 638]
gi|145320527|gb|ABP62674.1| glutamate racemase [Enterobacter sp. 638]
Length = 283
Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 84/272 (30%), Positives = 145/272 (53%), Gaps = 8/272 (2%)
Query: 5 NYPC----EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
N PC + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + +
Sbjct: 9 NTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEDFI 68
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + +Y L+VIACNTA T+ LR FP +G VPAIK AA T +
Sbjct: 69 VERVVEIVTAVQARYPLALAVIACNTASTVSLPSLREKFP-FPVVGVVPAIKPAARLTAN 127
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T T++R YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 128 GIVGLLATRGTVKRPYTRELIDRFANECKIAMLGSAELVEMAEAKLHGEPVSLEELRRIL 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ ++ P +D+ +IARR LL
Sbjct: 188 GPWL--RMAEPPDTVVLGCTHFPLLQEELLEVLPEGTRLVDSGAAIARRTAWLLEHEAPE 245
Query: 241 QTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+ A ++ P+ + ++Q +G ++
Sbjct: 246 AKSSDKNIAFCMALTPETEQLLPVLQRYGFET 277
>gi|42780015|ref|NP_977262.1| glutamate racemase [Bacillus cereus ATCC 10987]
gi|42735933|gb|AAS39870.1| glutamate racemase [Bacillus cereus ATCC 10987]
Length = 275
Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAAALTALQKAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE +++K+ + +
Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGENVTIISSAEETAIELSTILQHKGILSDNLNPVHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259
>gi|192290178|ref|YP_001990783.1| glutamate racemase [Rhodopseudomonas palustris TIE-1]
gi|192283927|gb|ACF00308.1| glutamate racemase [Rhodopseudomonas palustris TIE-1]
Length = 264
Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats.
Identities = 103/257 (40%), Positives = 151/257 (58%), Gaps = 4/257 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++
Sbjct: 5 PTILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L VIACNTA T+ LR+ + + F+G VPAIK A +++ +S+L T AT+R
Sbjct: 65 AHAPDLVVIACNTASTMTLAPLRARYR-VPFVGTVPAIKPACTGSRTKRVSVLGTSATVR 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--R 191
YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + K R
Sbjct: 124 LEYTRALIRDFAQGCEVSLVGSIRLATLAETALGGGEVTDAAIRAEIAPCFVEADAKRGR 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F
Sbjct: 184 TDAVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGPATGHAP-TPGAEMIF 242
Query: 252 LSGKPDIAMRRLMQGFG 268
SG+ A L FG
Sbjct: 243 TSGRHPRASAALAPYFG 259
>gi|227510206|ref|ZP_03940255.1| glutamate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190411|gb|EEI70478.1| glutamate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 264
Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 9/253 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+++ ++P +I+V D PYG ++K + +L K
Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRKLTKRIADYML-KQNVK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNT+ D L+ P + +G + P + A A T + I +++T T+
Sbjct: 60 MFVIACNTSTAASLDYLKKILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVNSGVY 118
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+I S + ++ + + VE G ++ +++ ++ K D +VL
Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQLAY----FHDKPIDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--ALFLSGK 255
CTH+P++ + ++ +D S A+ L + + + F +G
Sbjct: 175 GCTHFPVLETEIKDAVNSGINLIDPGISTAKNVADYLRSHHQMRDSSQSPQIKSFFTTGN 234
Query: 256 PDIAMRRLMQGFG 268
+ + Q G
Sbjct: 235 QNEFTKIADQLLG 247
>gi|315298482|gb|EFU57737.1| hypothetical protein HMPREF9545_02463 [Escherichia coli MS 16-3]
Length = 262
Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+S +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSSAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|197336453|ref|YP_002157219.1| glutamate racemase [Vibrio fischeri MJ11]
gi|226707593|sp|B5FCA3|MURI_VIBFM RecName: Full=Glutamate racemase
gi|197317943|gb|ACH67390.1| glutamate racemase [Vibrio fischeri MJ11]
Length = 261
Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats.
Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 11/256 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSGIGGL V +++++ +P +IY D+ FPYG + L +R + S++
Sbjct: 1 MPKHILIFDSGIGGLSVYKEIKYQLPLAKYIYAFDNAAFPYGELTESVLIERTTHIISEL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA T++ LR + +G VPAIK AA + I +L+TPAT
Sbjct: 61 CSQFPIDIVVIACNTASTVVLPSLRDKL-DIPVVGVVPAIKPAALVS--NKIGLLATPAT 117
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT +LI S+ + L+ S L EE GI + K+++ +
Sbjct: 118 VKRSYTYDLIKSFAPISDVQLLGSTRLVEMAEEKMIGIDVDMRA-KRDLSPW-----QNK 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D IVL CTH+P + + ++ + +D+ ++IARR + LL +F+
Sbjct: 172 VDTIVLGCTHFPFLKNEIKKALGNKILLIDSGEAIARRVKQLLNGDGVESAVLFEGEVFC 231
Query: 252 LSGKPDIAMRRLMQGF 267
P I L F
Sbjct: 232 --SAPSIKEEALNHTF 245
>gi|257791702|ref|YP_003182308.1| glutamate racemase [Eggerthella lenta DSM 2243]
gi|257475599|gb|ACV55919.1| glutamate racemase [Eggerthella lenta DSM 2243]
Length = 303
Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats.
Identities = 49/263 (18%), Positives = 96/263 (36%), Gaps = 15/263 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL V +++ +P +Y+ D PYG + + + + ++
Sbjct: 21 NAPIGVFDSGFGGLTVAREIAKELPRESIVYLGDSARCPYGPRSLDEVDGFVQQIGAWLV 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L VIACNTA + TFP P + AA T++ + +++T AT+
Sbjct: 81 ERG-VKLVVIACNTATAAGLSHAQRTFPVPVIGVVEPGARAAAHATKNRRVGVIATKATV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------------EDEIKKE 179
+ I + + ++ E+ + ++
Sbjct: 140 ESDAYTKAIRHLDAGITVFSTATPRFVEIAEQGLRMAEGPIEDFTSLVSTVYIRPAFQEI 199
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
D +VL CTH+PL+ + + V + ++ A +L R
Sbjct: 200 AREYLEPLRRCDIDTLVLGCTHFPLLKALIGGVVGRDVTLISSAQEAAHDVAHILSRRGA 259
Query: 240 HQTRVF-DDHALFLSGKPDIAMR 261
+ + + +G+ R
Sbjct: 260 LASEDHEPSYDFYTTGEDVEEFR 282
>gi|146299447|ref|YP_001194038.1| glutamate racemase [Flavobacterium johnsoniae UW101]
gi|146153865|gb|ABQ04719.1| glutamate racemase [Flavobacterium johnsoniae UW101]
Length = 259
Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 8/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I +FDSGIGG + + L+P IY+AD PYG + +L
Sbjct: 4 NNPIGVFDSGIGGTSIWSAIHDLLPNEKTIYLADSKNAPYGQKTKEEIVALSKKNVEFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA T ELR+ + + F+G PAIK AA +++ +I IL+T TL
Sbjct: 64 E-NNCKLIVVACNTATTNAIRELRNDY-DIPFIGIEPAIKPAATNSRTQVIGILATKGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + I L +E+ + E+ + +E
Sbjct: 122 NSELFNKTAEMF-QHTTIIEQVGYGLVQLIEDG----NLNSPEMTQLLESYLQPMIDANI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALF 251
D +VL C+HYP ++ +++ P + +D+ +++AR+ + +L + + D +
Sbjct: 177 DYLVLGCSHYPYLIPQIKKILPDHIQIIDSGEAVARQTQNVLREKAGFTDGKNNSDPVFY 236
Query: 252 LSGKPDIAMRRLMQGF 267
++ P + L +
Sbjct: 237 VNSNPAVLKSILENKY 252
>gi|49476942|ref|YP_035099.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49328498|gb|AAT59144.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 276
Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA T L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAATATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTEED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSALSFEHIAERWLGYQ 259
>gi|170022021|ref|YP_001726975.1| glutamate racemase [Escherichia coli ATCC 8739]
gi|194438347|ref|ZP_03070438.1| glutamate racemase [Escherichia coli 101-1]
gi|297521937|ref|ZP_06940323.1| glutamate racemase [Escherichia coli OP50]
gi|300916976|ref|ZP_07133674.1| hypothetical protein HMPREF9540_00832 [Escherichia coli MS 115-1]
gi|300928750|ref|ZP_07144266.1| hypothetical protein HMPREF9550_01102 [Escherichia coli MS 187-1]
gi|300948244|ref|ZP_07162363.1| hypothetical protein HMPREF9541_01786 [Escherichia coli MS 116-1]
gi|300954723|ref|ZP_07167157.1| hypothetical protein HMPREF9547_00648 [Escherichia coli MS 175-1]
gi|301024176|ref|ZP_07187885.1| hypothetical protein HMPREF9551_02242 [Escherichia coli MS 196-1]
gi|301645164|ref|ZP_07245121.1| hypothetical protein HMPREF9543_01787 [Escherichia coli MS 146-1]
gi|312971739|ref|ZP_07785913.1| glutamate racemase [Escherichia coli 1827-70]
gi|169756949|gb|ACA79648.1| glutamate racemase [Escherichia coli ATCC 8739]
gi|194422784|gb|EDX38780.1| glutamate racemase [Escherichia coli 101-1]
gi|299880535|gb|EFI88746.1| hypothetical protein HMPREF9551_02242 [Escherichia coli MS 196-1]
gi|300318304|gb|EFJ68088.1| hypothetical protein HMPREF9547_00648 [Escherichia coli MS 175-1]
gi|300415728|gb|EFJ99038.1| hypothetical protein HMPREF9540_00832 [Escherichia coli MS 115-1]
gi|300452222|gb|EFK15842.1| hypothetical protein HMPREF9541_01786 [Escherichia coli MS 116-1]
gi|300463275|gb|EFK26768.1| hypothetical protein HMPREF9550_01102 [Escherichia coli MS 187-1]
gi|301076543|gb|EFK91349.1| hypothetical protein HMPREF9543_01787 [Escherichia coli MS 146-1]
gi|310334116|gb|EFQ00321.1| glutamate racemase [Escherichia coli 1827-70]
gi|315617764|gb|EFU98369.1| glutamate racemase [Escherichia coli 3431]
Length = 262
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|300789525|ref|YP_003769816.1| glutamate racemase [Amycolatopsis mediterranei U32]
gi|299799039|gb|ADJ49414.1| glutamate racemase [Amycolatopsis mediterranei U32]
Length = 257
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 99/253 (39%), Gaps = 7/253 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P YV D PYG + + ++++
Sbjct: 1 MFDSGVGGLTVARAILEQLPAEQLRYVGDTAHNPYGPLPIATARSYALAALDELVESGVK 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L VIACNTA + R + +PA+++A T +G + ++ T T+R
Sbjct: 61 AL-VIACNTASAACLRDARERYDVPVIEVVLPAVRRAVVATHTGRVGVIGTEGTVRSRAY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + V+ VE ++ +G + D +VL
Sbjct: 120 EDAFAA-APAITLTSVACPRFVDFVERGIT----TGRQVLGLAQGYLQPLLDAQVDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFLSGKP 256
CTHYPL+ V + + V + ++D A+ +L + TR H +G
Sbjct: 175 GCTHYPLLQGVLQIVMGQEVTLVSSADETAKDLVRVLTEGDLLTTRDTPPRHEFLATGSA 234
Query: 257 DIAMRRLMQGFGL 269
+ R + G
Sbjct: 235 EPFTRLAQRFMGF 247
>gi|150003444|ref|YP_001298188.1| glutamate racemase [Bacteroides vulgatus ATCC 8482]
gi|254881258|ref|ZP_05253968.1| glutamate racemase [Bacteroides sp. 4_3_47FAA]
gi|294777674|ref|ZP_06743125.1| glutamate racemase [Bacteroides vulgatus PC510]
gi|319640260|ref|ZP_07994985.1| glutamate racemase [Bacteroides sp. 3_1_40A]
gi|149931868|gb|ABR38566.1| glutamate racemase [Bacteroides vulgatus ATCC 8482]
gi|254834051|gb|EET14360.1| glutamate racemase [Bacteroides sp. 4_3_47FAA]
gi|294448742|gb|EFG17291.1| glutamate racemase [Bacteroides vulgatus PC510]
gi|317388035|gb|EFV68889.1| glutamate racemase [Bacteroides sp. 3_1_40A]
Length = 281
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 11/270 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + +
Sbjct: 3 PSILPSTGPIGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQ 62
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRS-TFPSM----AFLGAV-PAIKQAAAYTQS 120
S + + P L ++ACNTA ++ P + LG + P + T+S
Sbjct: 63 AVSKLFELGCP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRS 121
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ IL+T T++ IH + + + S VE + + +K+ I
Sbjct: 122 RHVGILATAGTIKSESYLLEIHKLSPDIVVTGEACPMWVSLVENNEYQSEGADYFVKQHI 181
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D I+L CTHYPL++ RQ +P P+ + + +AR R L R
Sbjct: 182 NRLL--DKDPMIDTIILGCTHYPLLLDKIRQFTPEPIRIISQGEYVARSLRDYLNRHPEM 239
Query: 241 QTR--VFDDHALFLSGKPDIAMRRLMQGFG 268
R + + + G
Sbjct: 240 DARCDKGGNCRFLTTESENKFEESASIFLG 269
>gi|168185800|ref|ZP_02620435.1| glutamate racemase [Clostridium botulinum C str. Eklund]
gi|169295922|gb|EDS78055.1| glutamate racemase [Clostridium botulinum C str. Eklund]
Length = 259
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 7/257 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GGL VL++ ++P FIY D PYG +KK +L+
Sbjct: 7 PIGFFDSGVGGLSVLREAIKILPNEDFIYFGDSKNAPYGTKTVDEVKKLTFNAVEFLLE- 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + ++LR+++ + +G PA+K A + G I I++TP TL
Sbjct: 66 HNVKAIVIACNTATSAAIEDLRNSYKDIPIIGIEPALKPAVELHKKGKIVIMATPMTLAE 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L+ Y + + + L VE+ +K EI + + + K
Sbjct: 126 KKFNKLMEKYKGKSEMVSLPCPGLVEYVEKGI----VKGQEINRFLLEKLSVIDKKEISS 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLS 253
+VL CTHYP I ++ V +D S + + + L + N+ +F S
Sbjct: 182 VVLGCTHYPFIKEELSKILGEDVVIIDGSVGTSIQLKRKLIKDNSLNLEDKKGTVKIFNS 241
Query: 254 -GKPDIAMRRLMQGFGL 269
D + + G+
Sbjct: 242 LDDNDEVIGISKKLLGI 258
>gi|264677499|ref|YP_003277405.1| glutamate racemase [Comamonas testosteroni CNB-2]
gi|262208011|gb|ACY32109.1| glutamate racemase [Comamonas testosteroni CNB-2]
Length = 298
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 75/276 (27%), Positives = 123/276 (44%), Gaps = 18/276 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFL 67
+ I IFDSG+GGL VLQ +R +P F+Y+AD PYG+ D +++R + +
Sbjct: 1 MPTPHSPIGIFDSGVGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+L+++ + VIACNTA + LR P + +G PAIK A+ +Q+ + +++
Sbjct: 61 AKYLLEQHDIKILVIACNTATAAAVELLRERLPQLPVIGVEPAIKPASFSSQTHHVGVMA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCF 184
T T+ + L+ + + HL + LA +E E A EI+
Sbjct: 121 TRGTISSQRVARLVSEHGQRAEFHLQACDGLARAIEQSTEQALPEDASATEIRALCAKYT 180
Query: 185 IE-----KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + D +VL CTHY + R L + LD +AR+ R +L + N
Sbjct: 181 SALGSFGLKTGQMDTLVLGCTHYVFVKDDLRALLGPDIQLLDTGAPVARQTRRMLEQRNL 240
Query: 240 HQTRV--------FDDHALFLSGKPDIAMRRLMQGF 267
D L +G+ AM+ Q +
Sbjct: 241 LGAETDGSLQLAQADQIQLMTTGRL-TAMQAAAQRW 275
>gi|68250338|ref|YP_249450.1| glutamate racemase [Haemophilus influenzae 86-028NP]
gi|81335242|sp|Q4QJK7|MURI_HAEI8 RecName: Full=Glutamate racemase
gi|68058537|gb|AAX88790.1| glutamate racemase [Haemophilus influenzae 86-028NP]
Length = 269
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++
Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIH 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++
Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-EIPIIGTVPAIKPASEITKTKH 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSS 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQ 232
Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + P+ + ++ + +G +S
Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262
>gi|299142407|ref|ZP_07035539.1| glutamate racemase [Prevotella oris C735]
gi|298576129|gb|EFI48003.1| glutamate racemase [Prevotella oris C735]
Length = 278
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 101/263 (38%), Gaps = 11/263 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + +
Sbjct: 2 PMFPEKPGPIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQ 61
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
+ + L ++ CNTA +L + PS LG + P + T++
Sbjct: 62 AVMKLFE-LGCHLVILGCNTASAKALRSIQRNDLPNLDPSRRVLGVIRPTAEIIGTLTKN 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L+T T++ I + + V+ VE + +KK I
Sbjct: 121 NHVGLLATEGTVKSHSYDLEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRI 180
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-- 238
+ + D I+L CTHYP+++ + V + + +A + L R
Sbjct: 181 DELMLH--DPDIDTIILGCTHYPILMPKIVKYVRPGVRIVPQGEYVAGSLQDYLRRHTDM 238
Query: 239 THQTRVFDDHALFLSGKPDIAMR 261
HQ + P+
Sbjct: 239 EHQLTQGGSCRYLTTENPERFKE 261
>gi|269961492|ref|ZP_06175855.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833721|gb|EEZ87817.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 268
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 80/260 (30%), Positives = 133/260 (51%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P ++Y+ D+ +PYG + L R+ L + ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPHMDYLYLFDNEAYPYGELDQDVLITRVNKLVAALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR+ S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 EEHQADIVVIACNTASTIVLPSLRANL-SIPVVGVVPAIKPASLLASQG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G I E++ + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESISLPELESILLPL-----RNKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI Q V +D+ ++IARR + LL +++ ++
Sbjct: 179 DVAVLGCTHFPLIKDEIHQALGGEVTLVDSGEAIARRVKALLTSDMKEESKEEGSKKIYA 238
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ + G
Sbjct: 239 SAPPWQEDALNTCLANLGFN 258
>gi|225850547|ref|YP_002730781.1| glutamate racemase [Persephonella marina EX-H1]
gi|254766121|sp|C0QQ35|MURI_PERMH RecName: Full=Glutamate racemase
gi|225646550|gb|ACO04736.1| glutamate racemase [Persephonella marina EX-H1]
Length = 259
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 13/243 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI IFDSG+GGL V +++ P Y+ D PYGN + + + + +
Sbjct: 2 SIGIFDSGVGGLTVFREIDREFPFADIYYLGDTARVPYGNKSKETIIRYSLECANYLYS- 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ ++ACNTA + + LR +F + +G + P ++ A T++G I ++ T AT++
Sbjct: 61 FGIDALIVACNTASSYAIEALRESF-DIPVIGVIKPGVELAVKTTKNGRIGVIGTQATIK 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I ++ + VEE KI E +K+ ++ + K D
Sbjct: 120 SGSYRTEIEKK-GDFTVYQKPCPLFVPLVEEGLIDHKITELTVKEYLD----DIVSKGID 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYPL+ V +++ P ++ +D+S + A L + N +
Sbjct: 175 TLILGCTHYPLLKDVIKKIYP-HLNIIDSSKATA----LYLKKKNLDLNGTGERKIFITD 229
Query: 254 GKP 256
P
Sbjct: 230 ESP 232
>gi|289549102|ref|YP_003474090.1| glutamate racemase [Thermocrinis albus DSM 14484]
gi|289182719|gb|ADC89963.1| glutamate racemase [Thermocrinis albus DSM 14484]
Length = 255
Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 13/241 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL+ +R P+ +Y+ D PYG+ +++ + +L +
Sbjct: 3 IGVFDSGIGGLTVLKAIRERYPKVDLLYLGDTARVPYGSKSKETVQRYSIECAEFLL-GH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA D LR P F P +++A SG + ++ T T+
Sbjct: 62 DVDLVVVACNTASAYALDLLRERLPVEVFGVIEPGVEEALRVCTSGKVGVIGTRGTISSG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL+ + + + VEE + E + E + + D +
Sbjct: 122 AYQNLLQK--KGVKVLAKACPLFVPLVEEGMVRGPVAELLV----EHYLKDLKESGIDTL 175
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ V + V +D++ + AR + + F
Sbjct: 176 ILGCTHYPLLKDVIQAYMDGTV-IVDSAHATARWIERYVKDEGNSSLSL-----YFTDDS 229
Query: 256 P 256
P
Sbjct: 230 P 230
>gi|187732533|ref|YP_001882660.1| glutamate racemase [Shigella boydii CDC 3083-94]
gi|187429525|gb|ACD08799.1| glutamate racemase [Shigella boydii CDC 3083-94]
Length = 262
Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats.
Identities = 81/256 (31%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T + ++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANSIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|118445076|ref|YP_879120.1| glutamate racemase [Clostridium novyi NT]
gi|166231036|sp|A0Q3B8|MURI_CLONN RecName: Full=Glutamate racemase
gi|118135532|gb|ABK62576.1| glutamate racemase [Clostridium novyi NT]
Length = 259
Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 7/257 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GGL VL++ ++P FIY D PYG +KK +L
Sbjct: 7 PIGFFDSGVGGLSVLREAIKVLPNEDFIYFGDSKNAPYGTKTVDEVKKLTFNAVEFLL-G 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + ++LR+++ + +G PA+K A + G I +++TP TL
Sbjct: 66 HNVKAVVIACNTATSAAIEDLRNSYKDIPIIGIEPALKPAVELNKKGKIVVMATPMTLAE 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
++L+ Y + + + L VE+ +K E+ ++ + K
Sbjct: 126 KKFNDLMAKYKGRSEMVSLPCPGLVEYVEKGI----VKGQELNNYLQKKLSIIDKKEISS 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLS 253
+VL CTHYP I ++ V +D S + + + L + + + +F S
Sbjct: 182 VVLGCTHYPFIKEELSKILGEDVVIIDGSLGTSIQLKRKLIKNKSLNLQDKKGTVKIFNS 241
Query: 254 -GKPDIAMRRLMQGFGL 269
+ ++ + G+
Sbjct: 242 LDNNEEIIKISKKLLGI 258
>gi|167764308|ref|ZP_02436435.1| hypothetical protein BACSTE_02693 [Bacteroides stercoris ATCC
43183]
gi|167698424|gb|EDS15003.1| hypothetical protein BACSTE_02693 [Bacteroides stercoris ATCC
43183]
Length = 279
Score = 277 bits (711), Expect = 7e-73, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARAPYGTRSFEVVYEFTLQAVTKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P+ LG + P ++ T+S + +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPHLDPARRVLGVIRPTVECIGNITRSRHVGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + + + S VE + ++K I
Sbjct: 129 TGGTIKSESYPLEIHKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFVRKYINELLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVF 245
+ + D +L CTHYP+++ R+ P + + +A + L R Q
Sbjct: 187 KDREIDTAILGCTHYPILLPKIRKYMPESITIVSQGKLVADSLKDYLHRHPEIDAQCTQN 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + D
Sbjct: 247 GKCSYYTTEAEDKFTE 262
>gi|229177385|ref|ZP_04304768.1| Glutamate racemase [Bacillus cereus 172560W]
gi|228606108|gb|EEK63546.1| Glutamate racemase [Bacillus cereus 172560W]
Length = 284
Score = 277 bits (711), Expect = 7e-73, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 102/259 (39%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 15 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNT S+ +G + P + A T+ G I ++ T T
Sbjct: 74 KQFPLKALVVACNT-AAAAALNALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 133 IKSNMYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLMKED 188
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ + + +++ A +L + H F
Sbjct: 189 IDTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFF 248
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 249 TTGSVLSFEHIAERWLGYQ 267
>gi|260767618|ref|ZP_05876554.1| glutamate racemase [Vibrio furnissii CIP 102972]
gi|260617518|gb|EEX42701.1| glutamate racemase [Vibrio furnissii CIP 102972]
gi|315178791|gb|ADT85705.1| glutamate racemase [Vibrio furnissii NCTC 11218]
Length = 267
Score = 277 bits (711), Expect = 7e-73, Method: Composition-based stats.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 15/270 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ +P K L IFDSG+GGL V ++++ +P+ + Y+ D+ +PYG L +
Sbjct: 1 MSEHPQYKAL-----IFDSGVGGLSVYREIQTRLPQVSYTYLFDNAAYPYGELAQETLLQ 55
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R+ L ++++ + + VIACNTA T++ LR+ ++ +G VPAIK A+
Sbjct: 56 RVDMLVTNLVAQQGFDIVVIACNTASTIVLPRLRAKL-AIPVVGVVPAIKPASMLAH-KA 113
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++TPAT+ R YT +LI + S ++ L+ S L EE G + +E+ +
Sbjct: 114 VGLIATPATITRQYTHDLIRDFSSDKNVELLGSTRLVDMAEEKLRGKAVDLEELASILSP 173
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ DV VL CTH+PLI + + V +D+ ++IARR + LL + T
Sbjct: 174 L-----RQHIDVAVLGCTHFPLIKEEIQAVLGKDVMLVDSGEAIARRVQDLL-HLETGSM 227
Query: 243 RVFDDHALFLSGKP--DIAMRRLMQGFGLK 270
+ H++F S P + A+ ++ G
Sbjct: 228 QDEHPHSIFSSAPPWEEDALNEKLEQLGFS 257
>gi|288926935|ref|ZP_06420833.1| glutamate racemase [Prevotella buccae D17]
gi|288336294|gb|EFC74677.1| glutamate racemase [Prevotella buccae D17]
Length = 280
Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 100/267 (37%), Gaps = 15/267 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG +
Sbjct: 1 MTM----ALPSTPGPIGIFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGTRSFDVV 56
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELR-----STFPSMAFLGAV-PAIKQA 114
+ + + L ++ CNTA ++ P LG + P +
Sbjct: 57 YQFTRQAVIKLFE-MGCHLVILGCNTASAKALRSIQHRDIPELDPDRRVLGVIRPTAEVI 115
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
T++ + + +T T+R + I + V+ VE +
Sbjct: 116 GELTRNNHVGLFATEGTVRSCSYNLEIGKLWPDIKVTGVACPFWVPLVEYNEADSPGADY 175
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+KK ++ + ++ D I+L CTHYPL++ + P V + + +A +
Sbjct: 176 FVKKRVDE--LMRKDPEIDTIILGCTHYPLLMPKILKYVPPGVRIIPQGEYVADSLKAYF 233
Query: 235 PRINTHQ--TRVFDDHALFLSGKPDIA 259
R + F + PD
Sbjct: 234 ERHPAMERMCTRGGTCEYFTTENPDRF 260
>gi|281425969|ref|ZP_06256882.1| glutamate racemase [Prevotella oris F0302]
gi|281399862|gb|EFB30693.1| glutamate racemase [Prevotella oris F0302]
Length = 278
Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 101/263 (38%), Gaps = 11/263 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + +
Sbjct: 2 PMFPEKPGPIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQ 61
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQS 120
+ + L ++ CNTA +L + PS LG + P + T++
Sbjct: 62 AVMKLFE-LGCHLVILGCNTASAKALRSIQRTDLPNLDPSRRVLGVIRPTAEIIGTLTKN 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L+T T++ I + + V+ VE + +KK I
Sbjct: 121 NHVGLLATEGTVKSHSYDLEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRI 180
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-- 238
+ + D I+L CTHYP+++ + V + + +A + L R
Sbjct: 181 DELMLH--DPDIDTIILGCTHYPILMPKIVKYVRPGVRIVPQGEYVAGSLQDYLRRHTDM 238
Query: 239 THQTRVFDDHALFLSGKPDIAMR 261
HQ + P+
Sbjct: 239 EHQLTQGGSCRYLTTENPERFKE 261
>gi|198275393|ref|ZP_03207924.1| hypothetical protein BACPLE_01555 [Bacteroides plebeius DSM 17135]
gi|198271729|gb|EDY95999.1| hypothetical protein BACPLE_01555 [Bacteroides plebeius DSM 17135]
Length = 281
Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats.
Identities = 56/262 (21%), Positives = 105/262 (40%), Gaps = 11/262 (4%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
YP I +FDSG GGL +L K +P+Y ++Y+ D+ PYG + +
Sbjct: 2 YPLSAPHTGPIGVFDSGYGGLTILGKFIERLPQYDYLYLGDNARAPYGTRSFEVVYDFTL 61
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQ 119
+ + P L ++ACNTA ++ P+ LG + P ++ T+
Sbjct: 62 QAVKKLFELGCP-LVILACNTASAKALRSIQQNDLPHMDPTRRVLGVIRPTVECIGEITR 120
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+G + +L+T T+R I + ++ + VE + +KK
Sbjct: 121 NGHVGLLATAGTVRSESYPLEIKKIFPDIQVTGMACPMWVPLVENKEYDGDGADYFVKKY 180
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
I+ ++ D ++L CTHYPL++ RQ +P + + + ++ + L R
Sbjct: 181 IDTIL--QKDPDIDTLILGCTHYPLLLQKIRQYTPSHIRLVTQGEYVSESLKDYLSRHPD 238
Query: 240 HQTRVFDD--HALFLSGKPDIA 259
R + + +
Sbjct: 239 MDARCSKNKRREFLTTESVEKF 260
>gi|86130768|ref|ZP_01049367.1| Asp/Glu/hydantoin racemase [Dokdonia donghaensis MED134]
gi|85818179|gb|EAQ39339.1| Asp/Glu/hydantoin racemase [Dokdonia donghaensis MED134]
Length = 268
Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats.
Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 6/253 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+N I +FDSGIGG + +++ +P IY+AD PYG + + ++
Sbjct: 4 KNVIGVFDSGIGGTSIWKEIVTRLPGEDTIYIADSKNAPYGAKSKEDIIALSVKNTEKLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA T + LR + + F+G PAIK AA +QS I IL+T TL
Sbjct: 64 A-LGAKIIVIACNTATTNAINYLRENYK-IPFIGIEPAIKPAAVQSQSKAIGILATKGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V L +E+ ++ E+ +E K
Sbjct: 122 NSSLFQTTSERWTQGVDVIEVIGEGLVPLIEQG----DLENIELYNLLESYIQPMVEKNI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL C+HYP ++ + +++ P V +D+ ++AR+ +L +N V +H L+
Sbjct: 178 DYLVLGCSHYPYLIPLLKKMLPPHVAIIDSGLAVARQTEAVLKELNNLSGDVSSEHYLYT 237
Query: 253 SGKPDIAMRRLMQ 265
+G + + L++
Sbjct: 238 NGDVKVLKKVLLR 250
>gi|295105836|emb|CBL03379.1| glutamate racemase [Gordonibacter pamelaeae 7-10-1-b]
Length = 313
Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 101/272 (37%), Gaps = 19/272 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL V +++ +P +Y+ D PYG + + + ++
Sbjct: 32 DAPIGVFDSGFGGLTVARELAKALPRESIVYLGDSARCPYGPRTLQEVDGFVQQIGGWLV 91
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D+ + VIACNTA + TFP P + AA T++ + +++T AT+
Sbjct: 92 DRG-VKMVVIACNTATAAGLAHAQRTFPVPVIGVVEPGARAAAHATRNNRVGVVATKATV 150
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------------EDEIKKE 179
+ I + + ++ E+ + ++
Sbjct: 151 ESNAYTKAIRHLDAGITVFSTATPRFVEIAEQGIRMAEGPLENYTSLASKVYIRPAFEEI 210
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
D +VL CTH+PL+ + + V + +S AR +L R +
Sbjct: 211 AREYLEPLRRAGVDTLVLGCTHFPLLKALIGGVMGREVTLISSSTEAARDVAEILARRSA 270
Query: 240 HQTRVFD-DHALFLSGKPDIAMRRLMQGFGLK 270
+ + + F +G R GFG +
Sbjct: 271 YARADHEARYEFFTTGDDLEEFR----GFGSR 298
>gi|332974650|gb|EGK11567.1| glutamate racemase [Kingella kingae ATCC 23330]
Length = 270
Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 12/268 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++N ++ Q I +FDSG+GGL V++ + +P + +Y D PYG + +++
Sbjct: 1 MNN----QRKQKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTIEE 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSG 121
+ +L + + VIACNT + +++ ++ L + A QAA A T++
Sbjct: 57 FTTQIVEFLL-QNEVKALVIACNTIAAVAYKKVQQMAGNIPVLSVIEAGAQAALATTRNN 115
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T T+ + IH+ I ++ +L VEE ++ + I
Sbjct: 116 HIGVIATSTTVNSNAYARAIHAQNPDTRILSQATPLLVPLVEEGWLDHEVT----RLTIH 171
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L CTH+PL+ + +P+ ++ +D+S + A L +
Sbjct: 172 EYLKPLLADQIDTLILGCTHFPLLKAAIKHEAPY-IELVDSSTTTAEATAQALAATDLLN 230
Query: 242 TRVF-DDHALFLSGKPDIAMRRLMQGFG 268
D+ ++S P + G
Sbjct: 231 PSTAIPDYRFYVSDIPLRFQTIGERFLG 258
>gi|54310515|ref|YP_131535.1| glutamate racemase [Photobacterium profundum SS9]
gi|46914958|emb|CAG21733.1| putative glutamate racemase [Photobacterium profundum SS9]
Length = 262
Score = 277 bits (711), Expect = 8e-73, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 130/226 (57%), Gaps = 6/226 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
++LIFDSG+GGL V Q+++ L+P+ +IY D+ FPYG E+ L +R + + +
Sbjct: 2 KTVLIFDSGVGGLSVYQELQALIPQVQYIYAFDNAAFPYGELEEDVLLQRTQHIVCSLAE 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ L VIACNTA T++ LR + S+ +G VPAIK AA +Q+ +I +L+TPAT+
Sbjct: 62 QHNVDLVVIACNTASTIVLPTLRESL-SIPVVGVVPAIKPAATLSQTKVIGLLATPATIH 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R+YT LI S+ S C + ++ S L EE G+ + DEI + I+ K D
Sbjct: 121 RSYTHELISSFASDCEVRMIGSTRLVEIAEEKLRGLPVSIDEIAEIIKPW-----QKDVD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
I+L CTH+PLI RQ + +D+ +IA R + LL +
Sbjct: 176 CIILGCTHFPLIKDEIRQALDKAIVIVDSGKAIANRVKDLLGDLPL 221
>gi|319898188|ref|YP_004136385.1| glutamate racemase [Haemophilus influenzae F3031]
gi|317433694|emb|CBY82082.1| glutamate racemase [Haemophilus influenzae F3031]
Length = 269
Score = 277 bits (711), Expect = 9e-73, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 133/270 (49%), Gaps = 9/270 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D +K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++
Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIH 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++
Sbjct: 57 RTLSACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T++R Y L+ + C + + + L E+ G + +K E+
Sbjct: 116 IGLLATKGTVKRHYIDELVDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQ 232
Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + P+ + ++ + +G +S
Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262
>gi|238923092|ref|YP_002936605.1| glutamate racemase [Eubacterium rectale ATCC 33656]
gi|238874764|gb|ACR74471.1| glutamate racemase [Eubacterium rectale ATCC 33656]
Length = 258
Score = 277 bits (711), Expect = 9e-73, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++
Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLERVRALTCEHAKELILN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R
Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y I + L + VE + D++++ +E D
Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+VL CTHYP + + +++ V D + AR + L
Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMKRRLAEKGLLTDSTA 228
>gi|158333794|ref|YP_001514966.1| glutamate racemase [Acaryochloris marina MBIC11017]
gi|158304035|gb|ABW25652.1| glutamate racemase [Acaryochloris marina MBIC11017]
Length = 264
Score = 277 bits (711), Expect = 9e-73, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 9/248 (3%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL VL++++ +P F+Y D PYG + + + + ++++
Sbjct: 1 MGGLTVLKELQQQLPNESFLYFGDTANVPYGTRSQAEILGFVRQILCWM-TSQPIKMAIM 59
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNT+ L DE+R+ F + LG + P + A Q I +++TPAT+ I
Sbjct: 60 ACNTSSALALDEVRAEF-DIPILGIILPGARAAVK--QGKRIGVIATPATVASESYPQAI 116
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ + + +E +I+E E + + + D +V CTH
Sbjct: 117 QEVNTTAKVFQEACPEFVPLIEHN----RIREPETLQIVHQHLHPLLQQGIDTLVYGCTH 172
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMR 261
YP + V RQ+ P V +D + I A+ L + F+SG P+
Sbjct: 173 YPHLSGVIRQVLPSHVKTVDPAVYITTAAKQELKLLQLQNGHAAQTTRFFVSGCPEQFAE 232
Query: 262 RLMQGFGL 269
Q G
Sbjct: 233 LSYQWLGF 240
>gi|291528592|emb|CBK94178.1| glutamate racemase [Eubacterium rectale M104/1]
Length = 258
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++
Sbjct: 2 SIAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLERVRALTCEHAKELILN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R
Sbjct: 62 QHAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIRE 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y I + L + VE + D++++ +E D
Sbjct: 122 EKLKKLMDRYRHLGEIIPLPCPGLMNFVERG----DLYGDDVRQYLEELLYSYSHGEIDA 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+VL CTHYP + + +++ V D + AR + L
Sbjct: 178 VVLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMKRRLAEKGLLTDSTA 228
>gi|222035687|emb|CAP78432.1| glutamate racemase [Escherichia coli LF82]
Length = 260
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 81/255 (31%), Positives = 138/255 (54%), Gaps = 4/255 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYPL 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+YT
Sbjct: 61 ALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYT 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + ++C I ++ S + E G + D +K+ + KE D +VL
Sbjct: 120 HELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVVL 177
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTH+PL+ Q+ P +D+ +IARR LL + A ++ P+
Sbjct: 178 GCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPE 237
Query: 258 -IAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 238 AEQLLPVLQRYGFET 252
>gi|229108454|ref|ZP_04238071.1| Glutamate racemase [Bacillus cereus Rock1-15]
gi|228675081|gb|EEL30308.1| Glutamate racemase [Bacillus cereus Rock1-15]
Length = 265
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 52/254 (20%), Positives = 104/254 (40%), Gaps = 7/254 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA EL+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 60 KTLVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+H + +H + LA+ VE + ++++ + + D ++
Sbjct: 119 YEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTLI 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYPL+ ++ + + +++ A +L + H F +G
Sbjct: 175 LGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSV 234
Query: 257 DIAMRRLMQGFGLK 270
+ G +
Sbjct: 235 LSFEHIAERWLGYQ 248
>gi|225849254|ref|YP_002729418.1| glutamate racemase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644018|gb|ACN99068.1| glutamate racemase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 260
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI IFDSGIGGL V +++ P+ Y+ D PYGN + + + + +
Sbjct: 2 SIGIFDSGIGGLTVFKEVAENFPKADIYYLGDTARVPYGNKSKETIIRYSIECATYLYHN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ L +IACNTA + + L+ P + +G V P + A YT++ + ++ T AT++
Sbjct: 62 FNVDLLIIACNTASSYAIETLKKILP-IPIIGVVKPGAEAAIRYTKNKKVGVIGTVATVK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
N + + + I+ + VEE ++ +K+ ++ E K D
Sbjct: 121 SQSYVNELKNLDNSLEIYQKPCPLFVPLVEEGWIDNEVARLTVKEYLQ----ELIEKGID 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----VFDDHA 249
++L CTHYPL+ + + L P ++ +D+S +I + L N + R + HA
Sbjct: 177 TLILGCTHYPLLKNTIKSLYP-HLNIVDSSIAIVDHIKNLNLTFNGNGVRKVFITDESHA 235
Query: 250 L 250
Sbjct: 236 F 236
>gi|317487823|ref|ZP_07946416.1| Asp/Glu/Hydantoin racemase [Eggerthella sp. 1_3_56FAA]
gi|325830581|ref|ZP_08164002.1| glutamate racemase [Eggerthella sp. HGA1]
gi|316913098|gb|EFV34614.1| Asp/Glu/Hydantoin racemase [Eggerthella sp. 1_3_56FAA]
gi|325487327|gb|EGC89769.1| glutamate racemase [Eggerthella sp. HGA1]
Length = 303
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 49/263 (18%), Positives = 96/263 (36%), Gaps = 15/263 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL V +++ +P +Y+ D PYG + + + + ++
Sbjct: 21 NAPIGVFDSGFGGLTVAREIAKELPRESIVYLGDSARCPYGPRSLDEVDGFVQQIGAWLV 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L VIACNTA + TFP P + AA T++ + +++T AT+
Sbjct: 81 ERG-VKLVVIACNTATAAGLAHAQRTFPVPVIGVVEPGARAAAHATKNRRVGVIATKATV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------------EDEIKKE 179
+ I + + ++ E+ + ++
Sbjct: 140 ESDAYTKAIRHLDAGITVFSTATPRFVEIAEQGLRMAEGPIEDFTSLVSTVYIRPAFQEI 199
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
D +VL CTH+PL+ + + V + ++ A +L R
Sbjct: 200 AREYLEPLRRCDIDTLVLGCTHFPLLKALIGGVVGREVTLISSAQEAAHDVAHILSRRGA 259
Query: 240 HQTRVF-DDHALFLSGKPDIAMR 261
+ + + +G+ R
Sbjct: 260 LASEDHEPSYDFYTTGEDVEEFR 282
>gi|229042717|ref|ZP_04190457.1| Glutamate racemase [Bacillus cereus AH676]
gi|228726657|gb|EEL77874.1| Glutamate racemase [Bacillus cereus AH676]
Length = 265
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 53/254 (20%), Positives = 104/254 (40%), Gaps = 7/254 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA EL+ S+ +G + P + A T+ I ++ T T++
Sbjct: 60 KALVVACNTAAAAALTELQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+H + +H + LA+ VE I + ++++ + + D ++
Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENRLEDI----AYVTQQVKQALLPLTKEDIDTLI 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSV 234
Query: 257 DIAMRRLMQGFGLK 270
+ G +
Sbjct: 235 LSFEHIAERWLGYQ 248
>gi|227488222|ref|ZP_03918538.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227542820|ref|ZP_03972869.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51866]
gi|227091792|gb|EEI27104.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227181446|gb|EEI62418.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51866]
Length = 261
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 9/254 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P Y+ D PYG ++ + ++
Sbjct: 4 RPIGIFDSGVGGLTVARAIADQLPHESIHYLGDTAHAPYGPRTADEVRALSTSVADQLVA 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA ++ DE R+ + + LG + PA+++A T++G +++L T T+
Sbjct: 64 R-DIKLLVIACNTATSVFLDEARALY-DVPVLGVIEPAVRRAVQVTKNGKVAVLGTVGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + SY + + VE +I + +
Sbjct: 122 RSGEYQRQMESY-EGVTCYAAPAPRFVDFVERGIT----TGRQILGVAQAYVSPLQEAGV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251
D VL CTHYPL+ V + V + +S+ A+ LL + + +
Sbjct: 177 DTCVLGCTHYPLLSGVIQLAIGDHVTLVSSSEETAKAVVRLLMEEDLLAPEDAEPERRYE 236
Query: 252 LSGKPDIAMRRLMQ 265
+G P + + +
Sbjct: 237 TTGDPRLFAQLASR 250
>gi|120600465|ref|YP_965039.1| glutamate racemase [Shewanella sp. W3-18-1]
gi|146294593|ref|YP_001185017.1| glutamate racemase [Shewanella putrefaciens CN-32]
gi|120560558|gb|ABM26485.1| glutamate racemase [Shewanella sp. W3-18-1]
gi|145566283|gb|ABP77218.1| glutamate racemase [Shewanella putrefaciens CN-32]
Length = 268
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 10/265 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P+ + Y+ D+ PYG E+ L + L ++
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKLLPQKEYCYLFDNARLPYGELEEQVLISGCVTLIEEL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACNTA TL+ LR S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 AIRIDAAIVVVACNTASTLVLPALREKL-SIPIVGVVPAIKPAALMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR YT LI + CH+ L L E+ + + +
Sbjct: 120 VRRHYTHKLISQFADGCHVELFGCSELVMMAEQKVATGILN----IERLARILAPVVAAD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDH-- 248
DV+VL CTH+P+I + + + V LD+ ++IA+R LL +
Sbjct: 176 LDVLVLGCTHFPMIRNELQLVLGAGVTLLDSGEAIAKRVVALLAQESGVLDNKTMGSKAS 235
Query: 249 --ALFLSGKPDIAMRRLMQGFGLKS 271
A + + + + G +
Sbjct: 236 MSAYYTKAEISEGLSSTLADCGFSA 260
>gi|256824843|ref|YP_003148803.1| glutamate racemase [Kytococcus sedentarius DSM 20547]
gi|256688236|gb|ACV06038.1| glutamate racemase [Kytococcus sedentarius DSM 20547]
Length = 285
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 96/256 (37%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P +Y+ D PYG +++ + ++D
Sbjct: 4 APIGIFDSGLGGLTVARAVIDHLPHESTVYLGDTHHAPYGPRPIAEVRRLALDSLDALMD 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACN+A + + R + PA ++AA T++G + ++ST AT
Sbjct: 64 RGVKAL-VIACNSASAAVLHDARERYSVPVIEVIRPAARRAAGITRTGAVGVISTQATHT 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + V + VE I E+ + D
Sbjct: 123 SGAYRDAFAA-VPSVQLRSQPCPRFVHFVESG----TISGPEVFAAATEYLQPLKEAGVD 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPRINTHQTRVFDDHALFL 252
++L CTHYPL+ V V + +++ A R L R H
Sbjct: 178 TLILGCTHYPLLRGVIAYEMGPEVSLVSSAEETAAELLRTLADRGELAPDATVPTHEFLT 237
Query: 253 SGKPDIAMRRLMQGFG 268
+G P + G
Sbjct: 238 TGDPSQFSELARRFLG 253
>gi|189500924|ref|YP_001960394.1| glutamate racemase [Chlorobium phaeobacteroides BS1]
gi|189496365|gb|ACE04913.1| glutamate racemase [Chlorobium phaeobacteroides BS1]
Length = 269
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + IFDSGIGGL V++ ++ L+P IY D PYG+ ++K I
Sbjct: 5 ASSPVGIFDSGIGGLTVVKAIQALLPSERIIYFGDTARVPYGSKSQVTIRKYAQDDTG-I 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPA 130
L KYQP L ++ACNT L D ++ + LG + A + A +++ + ++ T A
Sbjct: 64 LMKYQPKLIIVACNTVSALALDVVKRAGHGIPVLGVLEAGAELAVENSRNNQVGVIGTRA 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ +++ + + + + EE E ++ +
Sbjct: 124 TVLSNAYPLAMNALNPEVEVFSAACPLFVPLAEEGFIDHPAAEMIARE----YLLPLLDH 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFDD 247
D +VL CTHYP++ + +++ V +D+++++A +++ +L +N Q VF
Sbjct: 180 GIDTLVLGCTHYPILRKMIAEIAGQEVRIIDSAEAVALKSKEMLAGNGMLNGSQCHVFP- 238
Query: 248 HALFLSGKPDIA 259
L +S P
Sbjct: 239 -HLLVSDLPQKF 249
>gi|218710895|ref|YP_002418516.1| glutamate racemase [Vibrio splendidus LGP32]
gi|218323914|emb|CAV20275.1| glutamate racemase [Vibrio splendidus LGP32]
Length = 276
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 138/266 (51%), Gaps = 11/266 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ +Q +ILIFDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ +
Sbjct: 11 VSESIQKNILIFDSGVGGLSVYKEISQLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSI 70
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + + + VIACNTA T++ LR+ P + +G VPAIK A+ + + +++
Sbjct: 71 VASFVASHAIDIVVIACNTASTIVLPTLRANNP-IPIVGVVPAIKPASLL-ANKAVGLIA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT+ R YT LI ++ S + L+ S L E+ G I +E+++ ++
Sbjct: 129 TPATITREYTHELIKNFSSNKRVELLGSTQLVDMAEDKLRGEAINLEELRQILQPMI--- 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
DV VL CTH+PLI +Q+ V +D+ +IA+R + LL T
Sbjct: 186 --NTIDVAVLGCTHFPLIKSEIQQVLGKNVMLIDSGKAIAKRVQDLLDL--ESSTEEGGV 241
Query: 248 HALFLSGKP--DIAMRRLMQGFGLKS 271
F S P + A+ +++ G S
Sbjct: 242 REAFCSALPKKESALNSMLKQLGFSS 267
>gi|324324893|gb|ADY20153.1| glutamate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 276
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLMKEN 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + +H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGL 269
+G + G
Sbjct: 241 TTGSALSFEHIAERWLGY 258
>gi|169634818|ref|YP_001708554.1| putative glutamate racemase [Acinetobacter baumannii SDF]
gi|169153610|emb|CAP02797.1| putative glutamate racemase [Acinetobacter baumannii]
Length = 266
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 10/268 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I + DSG+GGL + + +R +P IY AD PYGN E + R L
Sbjct: 1 MNNNNSPIGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGNRESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + VIACNT + + +R+ ++ + PA+K A A T S I++L+T
Sbjct: 61 SNLVAHGKCKAIVIACNTMTAVAVETIRAQI-NVPLISIEPAVKPAVAMTVSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E E+K ++
Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235
Query: 248 HALFLSGKP----DIAMRRLMQGFGLKS 271
H ++ S P D+ L + +K+
Sbjct: 236 HIIWTSSDPLEVADVTFSLLSEKLSVKA 263
>gi|206975573|ref|ZP_03236485.1| glutamate racemase [Bacillus cereus H3081.97]
gi|222094594|ref|YP_002528654.1| glutamate racemase [Bacillus cereus Q1]
gi|206746035|gb|EDZ57430.1| glutamate racemase [Bacillus cereus H3081.97]
gi|221238652|gb|ACM11362.1| glutamate racemase [Bacillus cereus Q1]
Length = 276
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE +++K+ + +
Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + +H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGL 269
+G + G
Sbjct: 241 TTGSALSFEHIAERWLGY 258
>gi|196037606|ref|ZP_03104917.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|218902060|ref|YP_002449894.1| glutamate racemase [Bacillus cereus AH820]
gi|196031848|gb|EDX70444.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|218535080|gb|ACK87478.1| glutamate racemase [Bacillus cereus AH820]
Length = 276
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IQSNMYEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259
>gi|50955005|ref|YP_062293.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|71648716|sp|Q6AEK8|MURI_LEIXX RecName: Full=Glutamate racemase
gi|50951487|gb|AAT89188.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 272
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 97/256 (37%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + +R +P +YV D PYG +++ + + D+L
Sbjct: 3 DAPIGIFDSGVGGLTVARAIRDQLPNESILYVGDTTHSPYGPKPIADVRRYSLEVL-DLL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA + + + R + PA+++A A T++G + ++ T T+
Sbjct: 62 VEQGVKLLVIACNTASSAVLRDARERYAVPVVEVIQPAVRRAVAATRTGRVGVIGTVGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + VE DE+ +
Sbjct: 122 ASRAYEDAFAA-APDLRLFPRACPRFVEFVETGVTSG----DEVLRVAAEYLQPLRDADV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251
D +VL CTHYP + + V + + A+ +L + +
Sbjct: 177 DTLVLGCTHYPFLEGAISYVMGEGVSLVSSDIETAKDVYRILVSGGFERHDSAPPTVRYE 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G RL F
Sbjct: 237 ATGLDAEHFLRLAHRF 252
>gi|319424831|gb|ADV52905.1| glutamate racemase [Shewanella putrefaciens 200]
Length = 268
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 10/265 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P+ + Y+ D+ PYG E+ L + L ++
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKLLPQKEYCYLFDNARLPYGELEEQVLISGCVTLIEEL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACNTA TL+ LR S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 AIRIDAAIVVVACNTASTLVLPALREKL-SIPIVGVVPAIKPAALMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR YT LI + CH+ L L E+ + + +
Sbjct: 120 VRRHYTHKLISQFADGCHVELFGCSELVMMAEQKVATGILN----IERLARILAPVVAAD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-----NTHQTRVFD 246
DV+VL CTH+P+I + + + V LD+ ++IA+R LL + N
Sbjct: 176 LDVLVLGCTHFPMIRNELQLVLGAGVTLLDSGEAIAKRVVALLAQESEVLDNKTMGSKAS 235
Query: 247 DHALFLSGKPDIAMRRLMQGFGLKS 271
A + + + + G +
Sbjct: 236 MSAYYTKAEISEGLSSTLADCGFSA 260
>gi|227548659|ref|ZP_03978708.1| glutamate racemase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079273|gb|EEI17236.1| glutamate racemase [Corynebacterium lipophiloflavum DSM 44291]
Length = 258
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 99/255 (38%), Gaps = 10/255 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + M + IY+ D PYG ++ R + +++++
Sbjct: 1 MFDSGLGGLTVARAMMDQLHNESLIYIGDSANGPYGPQPIADVRIRAQNIADELVERG-V 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA + R + PA+++A A T++ + ++ T T+
Sbjct: 60 KMLVIACNTASAAFLHDARERYDVPVIEVIRPAVRRAIATTRNNRVGVIGTIGTINSGAY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+L S + + VE + +I +G + D +VL
Sbjct: 120 QDLF-SLQPGIEVTAAACPAFVEFVERGVTSGR----QILGVAQGYLEPLQAAGVDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----VFDDHALFLS 253
CTHYPL+ V + V + +++ A+ +L + +
Sbjct: 175 GCTHYPLLSGVIQLAMGDNVTLVSSAEETAKDVLRVLTERDLLAPEGLDAPAPTRVFEST 234
Query: 254 GKPDIAMRRLMQGFG 268
G P+ R + G
Sbjct: 235 GDPETFNRLAARFLG 249
>gi|237809706|ref|YP_002894146.1| glutamate racemase [Tolumonas auensis DSM 9187]
gi|237501967|gb|ACQ94560.1| glutamate racemase [Tolumonas auensis DSM 9187]
Length = 274
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 5/262 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++ +IL+FDSG+GGL + Q++R +P + + YV D+ FPYG +H + R L
Sbjct: 10 RINVNILLFDSGMGGLSIYQEVRRRLPGHRYDYVFDNAFFPYGEQPEHIITARCCLLIEH 69
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + Q L VIACNTA T++ LR ++ +G VPAIK AAA T++G I +L+TPA
Sbjct: 70 LVSERQIDLVVIACNTASTIVLPALRERL-AIPVVGVVPAIKPAAALTRNGSIGLLATPA 128
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++R YTS LI + + C + + L + E G + E I ++
Sbjct: 129 TVQRPYTSQLIAQFATHCQVLKLGVTELVVQAERKMAGYDVDEQAIHLALQPLLTHAMP- 187
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+PL+ ++ P + +D+ +IA+R LL A
Sbjct: 188 -PDTLVLGCTHFPLLKEEICRIMP-GIQLVDSGAAIAKRVAALLQGKIASDVTDTAGQAF 245
Query: 251 FLSGKPDIAMR-RLMQGFGLKS 271
PD + R++ +G S
Sbjct: 246 CTLLDPDAHKKSRILVEYGFHS 267
>gi|114566002|ref|YP_753156.1| glutamate racemase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336937|gb|ABI67785.1| glutamate racemase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 267
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 10/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V++ + MP+ FIY D PYGN + L + S ++
Sbjct: 4 NEPIGIFDSGVGGLTVVKSLMEKMPDESFIYFGDTAHVPYGNKSEQQLFNYAHKIISFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
K Q ++AC T ++ + + S+ LG V A + AA +++G I + +T AT
Sbjct: 64 SK-QVKAIIVACGTHSSVTLPSVLQEY-SLPMLGVVKAGARSAARLSRNGKIGVAATQAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + I ++ + VE K+ E ++ + +
Sbjct: 122 VNKKAYTREIQELEPDFQVYETACPRFVPLVEAG----KLNNSESREAVAEYLGPLLAQG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D +VL CTHYP + + + ++ +D S + + + + + H
Sbjct: 178 IDTLVLGCTHYPFLATAISEFAGEKLELVDTSCETIDELQEIFGAQDLFNNSGKKPRHEF 237
Query: 251 FLSGKPDIAMR--RLMQG 266
++SG D RL+ G
Sbjct: 238 YVSGHDDSFFNVGRLLMG 255
>gi|229149186|ref|ZP_04277427.1| Glutamate racemase [Bacillus cereus m1550]
gi|228634385|gb|EEK90973.1| Glutamate racemase [Bacillus cereus m1550]
Length = 276
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 102/259 (39%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNT S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNT-AAAAALNALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IKSNMYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ + + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVLSFEHIAERWLGYQ 259
>gi|254520425|ref|ZP_05132481.1| glutamate racemase [Clostridium sp. 7_2_43FAA]
gi|226914174|gb|EEH99375.1| glutamate racemase [Clostridium sp. 7_2_43FAA]
Length = 257
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 12/254 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN I FDSG+GGL V+++ +MP ++IY D PYG ++
Sbjct: 1 MDNK------NRPIGFFDSGVGGLSVMKEAIQVMPNENYIYFGDSKNAPYGVKSVEEVRD 54
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+K ++ IACNTA + +LR +P + +G PA+K A + G
Sbjct: 55 LTFKAVEFLLNKGVKGIA-IACNTATSAAVADLRKIYPDLPLVGIEPALKPAVELNKDGN 113
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I I++T TL+ + L++ Y + I V L +E K+ E+++ +
Sbjct: 114 ILIMATSMTLKEEKFNRLMNRYKDRASIIPVPCPGLVEFIEAG----KLDGKEVEEYLFE 169
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-Q 241
G + IVL CTHYP I ++ + +D A+ R L N +
Sbjct: 170 KVNTYNGGKIASIVLGCTHYPFIKDTLVKIIGKDITIIDGGLGTAKELRRRLSEKNLLTE 229
Query: 242 TRVFDDHALFLSGK 255
+R + S
Sbjct: 230 SRENGTIEIINSSN 243
>gi|146339801|ref|YP_001204849.1| glutamate racemase [Bradyrhizobium sp. ORS278]
gi|146192607|emb|CAL76612.1| glutamate racemase [Bradyrhizobium sp. ORS278]
Length = 265
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 105/259 (40%), Positives = 151/259 (58%), Gaps = 5/259 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ + AL R++ L +++
Sbjct: 4 RPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSEPALVARVVPLMGELI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++P L VIACNTA LR+ + + F+G VPAIK A A +++ +S+L T AT+
Sbjct: 64 SAHRPDLIVIACNTASVQTLAPLRAAYAT-PFVGTVPAIKPACAQSRTKRVSVLGTKATV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG--- 189
+R YT LI + C + LV S LAS E G + +D I EI CF G
Sbjct: 123 QREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTGVSDDAIAMEIAPCFTGDAGDPT 182
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
RTD +VLACTHYPL++ ++L+PWPV W+D + +IARR LL + +
Sbjct: 183 ARTDAVVLACTHYPLLLDRLQRLAPWPVAWIDPAPAIARRVVDLLG-PQSGRVDHGGATM 241
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+F S KP R L FG
Sbjct: 242 IFTSNKPHQLSRVLTPYFG 260
>gi|293610501|ref|ZP_06692801.1| predicted protein [Acinetobacter sp. SH024]
gi|292826845|gb|EFF85210.1| predicted protein [Acinetobacter sp. SH024]
Length = 266
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 6/249 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S++++ V+ACNT + + +R+ ++ + PA+K A A TQS I++L+T
Sbjct: 61 SNLINDGNCKAIVVACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E E+K ++
Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235
Query: 248 HALFLSGKP 256
H ++ S P
Sbjct: 236 HIIWTSSDP 244
>gi|291612568|ref|YP_003522725.1| glutamate racemase [Sideroxydans lithotrophicus ES-1]
gi|291582680|gb|ADE10338.1| glutamate racemase [Sideroxydans lithotrophicus ES-1]
Length = 268
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ +I +FDSG+GGL VLQ +R +P IYVAD PYG+ ++ R + +
Sbjct: 2 QPAGAIGVFDSGVGGLSVLQHIRHTLPHERLIYVADSGHVPYGDKSPAFIEARALAITRF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + VIACNTA LR F M L PA+K A A TQS ++ +L+T
Sbjct: 62 LISQGA-EAIVIACNTATAAAAHTLRVKFNKMPILAMEPAVKPAIAVTQSRVVGVLATVG 120
Query: 131 TLRRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + L+ Y + I L +VE ++ ++ +E
Sbjct: 121 TLESARFAALLEKYGGWKVKIETQGCPGLVEQVERG----ELHSARTRELVERYTAPLLR 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
K D ++L CTHYP + + R++ + +D ++AR + + +
Sbjct: 177 KGADTLILGCTHYPFLAPLIREIVGDNITLIDTGAAVARHLQHRVKAELPPRIVGEASER 236
Query: 250 LFLSGKPDIAMRRLMQGF 267
F SG P+ A R + +
Sbjct: 237 FFTSGDPEQASRIMSMLW 254
>gi|156972605|ref|YP_001443512.1| glutamate racemase [Vibrio harveyi ATCC BAA-1116]
gi|166231065|sp|A7MXD3|MURI_VIBHB RecName: Full=Glutamate racemase
gi|156524199|gb|ABU69285.1| hypothetical protein VIBHAR_00256 [Vibrio harveyi ATCC BAA-1116]
Length = 268
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P ++Y+ D+ +PYG + L R+ L + ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPHMDYLYLFDNEAYPYGELDQDVLITRVNKLVAALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR+ S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 EEHQADIVVIACNTASTIVLPSLRANL-SIPVVGVVPAIKPASLLASQG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G I E++ + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESISLSELESILLPL-----RNKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI Q V +D+ ++IARR + LL ++R ++
Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGGEVTLVDSGEAIARRVKALLLNAMKQESREEGSKKIYA 238
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ + G
Sbjct: 239 SAPPWQEDALNTCLANLGFN 258
>gi|169794284|ref|YP_001712077.1| putative glutamate racemase [Acinetobacter baumannii AYE]
gi|215481842|ref|YP_002324024.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|301347985|ref|ZP_07228726.1| glutamate racemase [Acinetobacter baumannii AB056]
gi|301512532|ref|ZP_07237769.1| glutamate racemase [Acinetobacter baumannii AB058]
gi|332850363|ref|ZP_08432697.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332871530|ref|ZP_08440024.1| glutamate racemase [Acinetobacter baumannii 6013113]
gi|169147211|emb|CAM85070.1| putative glutamate racemase [Acinetobacter baumannii AYE]
gi|213986873|gb|ACJ57172.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|332730821|gb|EGJ62131.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332731384|gb|EGJ62676.1| glutamate racemase [Acinetobacter baumannii 6013113]
Length = 266
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 6/249 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T
Sbjct: 61 SNLVTQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E E+K +E
Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----YTAEVKDYLENILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + +++ + ++ S+++ A+ R L ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLNSESPNEGN 235
Query: 248 HALFLSGKP 256
H ++ S P
Sbjct: 236 HIIWTSSDP 244
>gi|206968268|ref|ZP_03229224.1| glutamate racemase [Bacillus cereus AH1134]
gi|206737188|gb|EDZ54335.1| glutamate racemase [Bacillus cereus AH1134]
Length = 276
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 102/259 (39%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNT S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNT-AAAAALNALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IKSNMYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ + + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVLSFEHIAERWLGYQ 259
>gi|30260986|ref|NP_843363.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47526136|ref|YP_017485.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183830|ref|YP_027082.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|65318262|ref|ZP_00391221.1| COG0796: Glutamate racemase [Bacillus anthracis str. A2012]
gi|165871919|ref|ZP_02216561.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167635884|ref|ZP_02394192.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|167638901|ref|ZP_02397175.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|170687688|ref|ZP_02878904.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|170708261|ref|ZP_02898706.1| glutamate racemase [Bacillus anthracis str. A0389]
gi|177653883|ref|ZP_02935955.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190566741|ref|ZP_03019658.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|227816283|ref|YP_002816292.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|229604796|ref|YP_002865427.1| glutamate racemase [Bacillus anthracis str. A0248]
gi|254682956|ref|ZP_05146817.1| glutamate racemase [Bacillus anthracis str. CNEVA-9066]
gi|254734368|ref|ZP_05192081.1| glutamate racemase [Bacillus anthracis str. Western North America
USA6153]
gi|254739982|ref|ZP_05197674.1| glutamate racemase [Bacillus anthracis str. Kruger B]
gi|254753322|ref|ZP_05205358.1| glutamate racemase [Bacillus anthracis str. Vollum]
gi|150261200|pdb|2DWU|A Chain A, Crystal Structure Of Glutamate Racemase Isoform Race1 From
Bacillus Anthracis
gi|150261201|pdb|2DWU|B Chain B, Crystal Structure Of Glutamate Racemase Isoform Race1 From
Bacillus Anthracis
gi|150261202|pdb|2DWU|C Chain C, Crystal Structure Of Glutamate Racemase Isoform Race1 From
Bacillus Anthracis
gi|30254435|gb|AAP24849.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47501284|gb|AAT29960.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177757|gb|AAT53133.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|164712350|gb|EDR17885.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167513031|gb|EDR88403.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|167528701|gb|EDR91460.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|170126782|gb|EDS95664.1| glutamate racemase [Bacillus anthracis str. A0389]
gi|170668501|gb|EDT19248.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|172081111|gb|EDT66188.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190562293|gb|EDV16261.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|227007254|gb|ACP16997.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|229269204|gb|ACQ50841.1| glutamate racemase [Bacillus anthracis str. A0248]
Length = 276
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IQSNMYEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259
>gi|225027973|ref|ZP_03717165.1| hypothetical protein EUBHAL_02233 [Eubacterium hallii DSM 3353]
gi|224954687|gb|EEG35896.1| hypothetical protein EUBHAL_02233 [Eubacterium hallii DSM 3353]
Length = 274
Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 5/253 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+L + I +FDSG+GG+ VL++M LMP FIY D PYG ++ +
Sbjct: 16 MNQLSDPIAVFDSGMGGISVLREMTKLMPNEDFIYYGDSKHAPYGTKTLEEVRTLTIEHI 75
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ ++ + +ACNTA + LR +P + +G PAIK A T + +++T
Sbjct: 76 TYLIKEKHAKAVAVACNTATSAAVRILRDMYPDLPLVGVEPAIKPAVLATGHAKVVVMAT 135
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P TLR L Y Q I+ + L VE+ + ++++ + +
Sbjct: 136 PMTLREEKFHKLESLYDEQADIYPLPCPGLMEFVEQGI----LSGEKLETFLHNLLDPYK 191
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDD 247
K IVL CTHYP + ++++ V D A+ L + Q
Sbjct: 192 DKDITGIVLGCTHYPFLKETIQKIAGPSVTIFDGGYGTAKELLRRLRVADLAQVDNTRKG 251
Query: 248 HALFLSGKPDIAM 260
FL+ D A+
Sbjct: 252 SVTFLNSSDDPAL 264
>gi|160915680|ref|ZP_02077888.1| hypothetical protein EUBDOL_01688 [Eubacterium dolichum DSM 3991]
gi|158432156|gb|EDP10445.1| hypothetical protein EUBDOL_01688 [Eubacterium dolichum DSM 3991]
Length = 258
Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 5/258 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + I IFDSG+GG+ VL+++ LMP+ + +Y D PYG + +R +
Sbjct: 2 NVNSPIGIFDSGMGGISVLKQIHALMPQENLLYFGDSAYAPYGEKSRAEITERCYSICEF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ K VIACNTA + +ELR + ++ +G PA+K AA Q I +L+T
Sbjct: 62 FMRKK-VKAIVIACNTATSACVNELRKRYLNIPIIGMEPALKVAADNEQQQHILVLATYF 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ ++L+ + I+ L VEE+ E+ +K+ + +
Sbjct: 121 TLKEKKFADLMARCEKEHIIYKQPCPALVHIVEEHKLQ---DEELVKQTLRNYLAPYNLE 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
+ IVL CTH+ +L P + +D + A++ + LL + QT+
Sbjct: 178 EINSIVLGCTHFVFYRKYLTELLPKHIAIIDGNTGTAKQVKHLLEERDLLKQTKDIGAIE 237
Query: 250 LFLSGKPDIAMRRLMQGF 267
++ S + D ++ L Q
Sbjct: 238 IYNSLEDDKDIQDLAQEL 255
>gi|254479197|ref|ZP_05092544.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
gi|214034860|gb|EEB75587.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
Length = 264
Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 56/266 (21%), Positives = 108/266 (40%), Gaps = 16/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D+ P I +FDSG+GGL VL+++ ++PE +IY D PYG+ ++
Sbjct: 1 MDSRP--------IGVFDSGVGGLTVLKRLIQVLPEEDYIYFGDTKRVPYGDRSKEEIEL 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + + +K VIACNT I + + F + T++
Sbjct: 53 FAGQIINFMKEK-NVKAVVIACNTTCATID---KGKYDIELFDVLKAGAESGVYCTKNKK 108
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++T T+ I S Q ++ + +E+ + E
Sbjct: 109 VGVIATKRTVESRSYEINIKSINPQIEVYQKACPEFVPLIEKGLYNSPLA----YSVAEK 164
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
C + + K D ++L CTHYPL+ + +++ V+ +D + +A + L + N +
Sbjct: 165 CLKDLKAKEIDTLILGCTHYPLMEGIIKEIMGDGVEVVDPAIRLAFEVKKYLEKNNILNS 224
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFG 268
F+SG + + G
Sbjct: 225 GPKGKIEFFVSGDAENFKKTAEMVLG 250
>gi|42523267|ref|NP_968647.1| hypothetical protein Bd1778 [Bdellovibrio bacteriovorus HD100]
gi|39575472|emb|CAE79640.1| murI [Bdellovibrio bacteriovorus HD100]
Length = 268
Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 109/258 (42%), Gaps = 13/258 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL VL+++ P F+YV D PYG+ ++K + L
Sbjct: 6 SRPIGVFDSGIGGLTVLKELALQFPHESFLYVGDTARLPYGSKSPQTIRKYSEQII-QFL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K VIACNTA + + + P + P ++A + I +L+T AT+
Sbjct: 65 EKQNVKAIVIACNTASSQVPEREIDGLPIYNVI--EPGSQRALELSSGKRIGVLATRATV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ IH+ Q + + + EE + + + +
Sbjct: 123 NSQAYTHKIHALDPQAQVFDQACPLFVPLAEEGWDADPVTNLIVFRYLSPLLQ----NHI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHAL 250
D ++L CTHYP++ + +++ ++ +D+ ++IA+ R+ +++ +
Sbjct: 179 DTLILGCTHYPILKNSIARVTGSSIELVDSGEAIAQWLSRDFKSGRLGPNKSGEPRRIDI 238
Query: 251 FLSGK----PDIAMRRLM 264
+ ++A R L
Sbjct: 239 MTTDSSAHFTEMAQRILK 256
>gi|325123931|gb|ADY83454.1| putative glutamate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 266
Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 65/249 (26%), Positives = 121/249 (48%), Gaps = 6/249 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + + VIACNT + + +R+ ++ + PA+K A A TQ+ I++L+T
Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQTKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E E+K +E
Sbjct: 120 ATTVKGKNLKSLIETYAQHIKVSLVPCIGLAEKIETGKA----HTVEVKDYLENILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + + +++ + ++ S+++ A+ R L + ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDMIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235
Query: 248 HALFLSGKP 256
H ++ S P
Sbjct: 236 HIIWTSSDP 244
>gi|257063632|ref|YP_003143304.1| glutamate racemase [Slackia heliotrinireducens DSM 20476]
gi|256791285|gb|ACV21955.1| glutamate racemase [Slackia heliotrinireducens DSM 20476]
Length = 307
Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 59/274 (21%), Positives = 103/274 (37%), Gaps = 23/274 (8%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL +++ LMP +Y D PYG + + + + + ++
Sbjct: 22 NAPIGVFDSGYGGLTCAREIAELMPNESIVYFGDTARCPYGPRDQAEVDLFVQQIGAWLM 81
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPAT 131
DK + VIACNTA + + TF S+ LG P + AA T++ + ++ T T
Sbjct: 82 DKG-VKMLVIACNTATAAGLEHAQQTF-SVPILGAVEPGARAAARTTKNRKVGVIGTKGT 139
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------------EDEIKK 178
+ I + + + ++ VE K E +
Sbjct: 140 IESGCYPRAIRNIDAGITVFSTATPRFVEIVENGIRLAKGPFEDLTSSVSKVYIRPEFRT 199
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D +VLACTHYP++ + + V + +++ +A+ +L
Sbjct: 200 IAIEYLEPLRRCEIDTLVLACTHYPMLKALIGGVIGTNVRLVSSAEELAKDVHDVLSMRG 259
Query: 239 THQTRVF-DDHALFLSG-KPDIAMRRLMQGFGLK 270
+H F + D Q FG +
Sbjct: 260 QLADPNHVGEHRFFTTSTDVDEF-----QAFGSR 288
>gi|254758420|ref|ZP_05210447.1| glutamate racemase [Bacillus anthracis str. Australia 94]
Length = 276
Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IQSNMYEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSAILQHKGILADNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259
>gi|224536359|ref|ZP_03676898.1| hypothetical protein BACCELL_01233 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522019|gb|EEF91124.1| hypothetical protein BACCELL_01233 [Bacteroides cellulosilyticus
DSM 14838]
Length = 279
Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 105/260 (40%), Gaps = 11/260 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + +
Sbjct: 6 PTIPGPIGVFDSGYGGLTILSKIREALPQYDYIYLGDNARSPYGTRSFEIVYEFTLQAVT 65
Query: 70 DILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123
+ + L ++ACNTA +L P+ LG + P ++ T S +
Sbjct: 66 RLFE-MGCHLVILACNTASAKALRSIQMNDLPEMDPARRVLGVIRPTVECIGNITHSRHV 124
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
IL+T T++ IH + + + S VE + ++K I
Sbjct: 125 GILATAGTIKSESYPLEIHKLFPDIQVEGEACPLWVSLVENNEAEGDGTDYFVRKYINEL 184
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ ++ D ++L CTHYP+++ + P + + + +A + L R +
Sbjct: 185 LS--KDEQIDTVILGCTHYPILLPKIEKYMPKGITTVAQGELVATSLKDYLQRHPEMDAK 242
Query: 244 --VFDDHALFLSGKPDIAMR 261
+ + + +
Sbjct: 243 CTKGGNCTYYTTEAEEKFTE 262
>gi|312143228|ref|YP_003994674.1| glutamate racemase [Halanaerobium sp. 'sapolanicus']
gi|311903879|gb|ADQ14320.1| glutamate racemase [Halanaerobium sp. 'sapolanicus']
Length = 291
Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 13/262 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I + DSG+GGL V +++ L+P IY D + PYG + +++ + + + +
Sbjct: 5 KRAIGLLDSGVGGLTVAREIFKLLPGEDIIYYGDTLHLPYGPKKLSEVREYVENIIAYLK 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPAT 131
+ VIACNT + D ++ F + G + A K+A +Q+ I+++ T T
Sbjct: 65 QEKNVKAVVIACNTGSSAALDYVKQKF-EIPIFGMIDSAAKKAVKVSQNNKIAVIGTEGT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I ++ I + VE K E++K +
Sbjct: 124 INSQAYQKAIKYESAESEIFAKACPGFVKLVEAG----KFSGPEVEKTAYRYLESIIKAK 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF------ 245
DV++L CTH+P ++ V ++ V ++ + A + R L + N +F
Sbjct: 180 VDVLILGCTHFPYLMPVLAKVMGKDVMLVNPAQETALKFRKELNKANLLNKDIFLNKDIV 239
Query: 246 -DDHALFLSGKPDIAMRRLMQG 266
+H +S + I+ L G
Sbjct: 240 EGEHKFIVSDESRISKSFLEHG 261
>gi|262172913|ref|ZP_06040591.1| glutamate racemase [Vibrio mimicus MB-451]
gi|261893989|gb|EEY39975.1| glutamate racemase [Vibrio mimicus MB-451]
Length = 265
Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 134/257 (52%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E++ + DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELENILHPL-----KHTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGI--DKGEGENQKHHIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNIKLKELGFN 256
>gi|16273625|ref|NP_439883.1| glutamate racemase [Haemophilus influenzae Rd KW20]
gi|6166587|sp|P52973|MURI_HAEIN RecName: Full=Glutamate racemase
gi|3212239|gb|AAC23386.1| glutamate racemase (murI) [Haemophilus influenzae Rd KW20]
Length = 269
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 9/270 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++
Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIH 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++
Sbjct: 57 RTLAACQLINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSS 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTH+PLI + P +++ S +IA+R + LL N
Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMEPSAAIAKRIKYLLDDKNLQAQ 232
Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + P+ + ++ + +G +S
Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262
>gi|315607047|ref|ZP_07882051.1| glutamate racemase [Prevotella buccae ATCC 33574]
gi|315251101|gb|EFU31086.1| glutamate racemase [Prevotella buccae ATCC 33574]
Length = 278
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 55/254 (21%), Positives = 98/254 (38%), Gaps = 11/254 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + + + +
Sbjct: 8 GPIGIFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGTRSFDVVYQFTRQAVIKLFE 67
Query: 74 KYQPVLSVIACNTAFTLIKDELR-----STFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ CNTA ++ P LG + P + T++ + + +
Sbjct: 68 -MGCHLVILGCNTASAKALRSIQHRDIPELDPGRRVLGVIRPTAEVIGELTRNNHVGLFA 126
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+R + I + V+ VE + +KK ++ + +
Sbjct: 127 TEGTVRSCSYNLEIGKLWPDIKVTGVACPFWVPLVEYNEADSPGADYFVKKRVDE--LMR 184
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVF 245
+ D I+L CTHYPL++ + P V + + +A + R +
Sbjct: 185 KDPEIDTIILGCTHYPLLMPKILKYVPPGVRIIPQGEYVADSLKAYFERHPAMERMCTRG 244
Query: 246 DDHALFLSGKPDIA 259
F + PD
Sbjct: 245 GTCEYFTTENPDRF 258
>gi|282858901|ref|ZP_06268041.1| glutamate racemase [Prevotella bivia JCVIHMP010]
gi|282588283|gb|EFB93448.1| glutamate racemase [Prevotella bivia JCVIHMP010]
Length = 294
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 104/265 (39%), Gaps = 11/265 (4%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N P + SI +FDSG GGL +L ++ ++PEY +IY+ D+ PYG+ + +
Sbjct: 15 NMPFYPQQPGSIGVFDSGYGGLTILHGIQQVLPEYDYIYLGDNARAPYGSRSFEVVYEFT 74
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYT 118
+ + L ++ CNTA ++ P LG + P + + T
Sbjct: 75 RQAVLKLFE-MGCHLVILGCNTASAKALRTIQQNDLPKLAPDRRVLGVIRPTAEVIGSLT 133
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
S + IL+T T+R + I + +S + +E + +KK
Sbjct: 134 SSRHVGILATEGTIRSQSYNIEIQKQSPDIQVTGLSCPLWVPIIENNEADSPGADYFVKK 193
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
I+ I + + D ++L CTHYP+++ + V + + +A + L R
Sbjct: 194 RIDH--IMRLDPQIDTLILGCTHYPILMPKILKYVDRGVKIVPQGEYVAASLKDYLQRHP 251
Query: 239 THQTR--VFDDHALFLSGKPDIAMR 261
R + + P
Sbjct: 252 EMDERCTKHSSTKYYTTESPTKFKE 276
>gi|145630715|ref|ZP_01786494.1| glutamate racemase [Haemophilus influenzae R3021]
gi|144983841|gb|EDJ91291.1| glutamate racemase [Haemophilus influenzae R3021]
Length = 269
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 9/270 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D +K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++
Sbjct: 1 MD----KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSECEEESIIH 56
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++
Sbjct: 57 RTLAACQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKH 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 116 IGLLATKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSP 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTH+PLI + P ++D S +IA+R + LL N
Sbjct: 176 W---AGMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQ 232
Query: 243 RVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ + P+ + ++ + +G +S
Sbjct: 233 NEKYNQMFCTAHFPEESQFKKALHLWGFES 262
>gi|221068298|ref|ZP_03544403.1| glutamate racemase [Comamonas testosteroni KF-1]
gi|220713321|gb|EED68689.1| glutamate racemase [Comamonas testosteroni KF-1]
Length = 298
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 17/280 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFL 67
+ I IFDSG+GGL VLQ +R +P F+Y+AD PYG+ D +++R + +
Sbjct: 1 MPTPHSPIGIFDSGVGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+L ++ + VIACNTA + +R P + +G PAIK A+ +Q+ + +++
Sbjct: 61 AQYLLQQHDIKILVIACNTATAAAVELMRERMPQLPVIGVEPAIKPASFSSQTHHVGVMA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCF 184
T T+ + L+ + + HL + LA +E E A EI+
Sbjct: 121 TRGTVSSQRVARLVAEHGQRAEFHLQACDGLARAIEQSTEQALPEDASATEIRALCTKYT 180
Query: 185 IEK-----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + D +VL CTHY + R L + +LD +AR+ R +L + +
Sbjct: 181 SALGSFGHKTGQMDTLVLGCTHYVFVKDDLRALLGPDIQFLDTGAPVARQTRRMLEQRHL 240
Query: 240 HQTRVFDDH--------ALFLSGKPDIAMRRLMQGFGLKS 271
L +G+ + L +
Sbjct: 241 LGPETDGSRQLAQAEQIRLMTTGRLTAMQAAAQRWLDLPA 280
>gi|227513134|ref|ZP_03943183.1| glutamate racemase [Lactobacillus buchneri ATCC 11577]
gi|227083709|gb|EEI19021.1| glutamate racemase [Lactobacillus buchneri ATCC 11577]
Length = 264
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 9/253 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+++ ++P +I+V D PYG ++K + +L K
Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRKLTKRIADYML-KQNVK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNT+ D L+ P + +G + P + A A T + I +++T T+
Sbjct: 60 MFVIACNTSTAASLDYLKKILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVSSGVY 118
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+I S + ++ + + VE G ++ +++ ++ K D +VL
Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQLAY----FHDKSIDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHALFLSGK 255
CTH+P++ + +D +D S A+ L + + ++ + F +G
Sbjct: 175 GCTHFPVLEAEIKGAVNSGIDLIDPGISTAKSVADYLRSHHQMRDSSQFPQIKSFFTTGN 234
Query: 256 PDIAMRRLMQGFG 268
+ + Q G
Sbjct: 235 QNDFTKIADQLLG 247
>gi|254231591|ref|ZP_04924918.1| glutamate racemase murI [Mycobacterium tuberculosis C]
gi|124600650|gb|EAY59660.1| glutamate racemase murI [Mycobacterium tuberculosis C]
Length = 236
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 6/234 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL V + + +P+ +YV D PYG ++ + + D++
Sbjct: 6 APVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVG 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACN+A + + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKAL-VIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATIT 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I V+ VE + ++ +G + D
Sbjct: 125 SHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAQGYLEPLQRAEVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+VL CTHYPL+ + + V + +++ A+ +L I+ +
Sbjct: 180 TLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPP 233
>gi|257438473|ref|ZP_05614228.1| glutamate racemase [Faecalibacterium prausnitzii A2-165]
gi|257199052|gb|EEU97336.1| glutamate racemase [Faecalibacterium prausnitzii A2-165]
Length = 274
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 98/261 (37%), Gaps = 11/261 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSG+GGL ++++R +P + +Y D PYG+ + +
Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRRRLPHENIVYFGDTGRVPYGSRSPETILQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ +L K + AC T + P A ++AA T++
Sbjct: 53 YARQDIAFLLSK-DVKCIMAACGTVSSTYPAAEAEKLPVPYLGVVDAAAREAAFSTRNRR 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY--ACGIKIKEDEIKKEI 180
I ++ T AT+R L+ V I + VE K++ K I
Sbjct: 112 IGVIGTAATIRSRSYEALLRRLVPGVEITARPCPLFVPLVEAGYVDHSAPDKQEITKLVI 171
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E D ++L CTHYPLI + + V +D + + A +L
Sbjct: 172 AQYLTEIRDAGVDTLILGCTHYPLIKTMIGEFMGRNVVLVDPAKTAAHHLERILSERGLK 231
Query: 241 QTRVFDDHALFLSGKPDIAMR 261
++S PD ++
Sbjct: 232 ADHPAGQAHFYVSDAPDGFVQ 252
>gi|289427817|ref|ZP_06429526.1| glutamate racemase [Propionibacterium acnes J165]
gi|295131197|ref|YP_003581860.1| glutamate racemase [Propionibacterium acnes SK137]
gi|289158999|gb|EFD07194.1| glutamate racemase [Propionibacterium acnes J165]
gi|291377076|gb|ADE00931.1| glutamate racemase [Propionibacterium acnes SK137]
gi|313773262|gb|EFS39228.1| glutamate racemase [Propionibacterium acnes HL074PA1]
gi|313793455|gb|EFS41506.1| glutamate racemase [Propionibacterium acnes HL110PA1]
gi|313801146|gb|EFS42409.1| glutamate racemase [Propionibacterium acnes HL110PA2]
gi|313808495|gb|EFS46960.1| glutamate racemase [Propionibacterium acnes HL087PA2]
gi|313812068|gb|EFS49782.1| glutamate racemase [Propionibacterium acnes HL083PA1]
gi|313819230|gb|EFS56944.1| glutamate racemase [Propionibacterium acnes HL046PA2]
gi|313821098|gb|EFS58812.1| glutamate racemase [Propionibacterium acnes HL036PA1]
gi|313823476|gb|EFS61190.1| glutamate racemase [Propionibacterium acnes HL036PA2]
gi|313827021|gb|EFS64735.1| glutamate racemase [Propionibacterium acnes HL063PA1]
gi|313829865|gb|EFS67579.1| glutamate racemase [Propionibacterium acnes HL007PA1]
gi|313834707|gb|EFS72421.1| glutamate racemase [Propionibacterium acnes HL056PA1]
gi|313837924|gb|EFS75638.1| glutamate racemase [Propionibacterium acnes HL086PA1]
gi|314925917|gb|EFS89748.1| glutamate racemase [Propionibacterium acnes HL036PA3]
gi|314960892|gb|EFT04993.1| glutamate racemase [Propionibacterium acnes HL002PA2]
gi|314963344|gb|EFT07444.1| glutamate racemase [Propionibacterium acnes HL082PA1]
gi|314974021|gb|EFT18117.1| glutamate racemase [Propionibacterium acnes HL053PA1]
gi|314975447|gb|EFT19542.1| glutamate racemase [Propionibacterium acnes HL045PA1]
gi|314979454|gb|EFT23548.1| glutamate racemase [Propionibacterium acnes HL072PA2]
gi|314988438|gb|EFT32529.1| glutamate racemase [Propionibacterium acnes HL005PA2]
gi|314988643|gb|EFT32734.1| glutamate racemase [Propionibacterium acnes HL005PA3]
gi|315083402|gb|EFT55378.1| glutamate racemase [Propionibacterium acnes HL027PA2]
gi|315086803|gb|EFT58779.1| glutamate racemase [Propionibacterium acnes HL002PA3]
gi|315089450|gb|EFT61426.1| glutamate racemase [Propionibacterium acnes HL072PA1]
gi|315097779|gb|EFT69755.1| glutamate racemase [Propionibacterium acnes HL038PA1]
gi|327325396|gb|EGE67201.1| glutamate racemase [Propionibacterium acnes HL096PA2]
gi|327328265|gb|EGE70029.1| glutamate racemase [Propionibacterium acnes HL096PA3]
gi|327443689|gb|EGE90343.1| glutamate racemase [Propionibacterium acnes HL043PA1]
gi|327449226|gb|EGE95880.1| glutamate racemase [Propionibacterium acnes HL043PA2]
gi|327450180|gb|EGE96834.1| glutamate racemase [Propionibacterium acnes HL013PA2]
gi|327451244|gb|EGE97898.1| glutamate racemase [Propionibacterium acnes HL092PA1]
gi|328756764|gb|EGF70380.1| glutamate racemase [Propionibacterium acnes HL020PA1]
gi|328761038|gb|EGF74590.1| glutamate racemase [Propionibacterium acnes HL099PA1]
Length = 284
Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VE+ E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ + D
Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESGLLHSHPRD 237
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|119356253|ref|YP_910897.1| glutamate racemase [Chlorobium phaeobacteroides DSM 266]
gi|166231032|sp|A1BDJ6|MURI_CHLPD RecName: Full=Glutamate racemase
gi|119353602|gb|ABL64473.1| glutamate racemase [Chlorobium phaeobacteroides DSM 266]
Length = 272
Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 7/254 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ ++ I IFDSG+GGL V++ ++ MP IY D PYG ++K
Sbjct: 5 KATPESPIGIFDSGVGGLTVVRAIQAEMPAERIIYFGDTARVPYGTKSPATIRKYAHE-D 63
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILS 127
+ IL + P + ++ACNT L D + T S+ +G + A A T++ + ++
Sbjct: 64 TAILMSHLPKIIIVACNTVSALALDVVEKTAGSIPVIGVLKAGADLAVQVTRNKHVGVIG 123
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ ++ I + + + + EE + +
Sbjct: 124 TQATVSSNAYADAITLLDANIEVVSKACPLFVPLAEEGFT----EHAATRLIASDYLAAF 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
+G D +VL CTHYP++ HV + + +D+++++A R R LL T
Sbjct: 180 DGHDIDTLVLGCTHYPILRHVITETLHRDIRIIDSAEAVAGRTRKLLADAKLLSTEKHAP 239
Query: 247 DHALFLSGKPDIAM 260
L +S P
Sbjct: 240 PPHLLVSDLPQKFS 253
>gi|47564795|ref|ZP_00235839.1| glutamate racemase [Bacillus cereus G9241]
gi|47558168|gb|EAL16492.1| glutamate racemase [Bacillus cereus G9241]
Length = 276
Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVAEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA + L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAVALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGL 269
+G + G
Sbjct: 241 TTGSALSFEHIAERWLGY 258
>gi|258622814|ref|ZP_05717831.1| glutamate racemase [Vibrio mimicus VM573]
gi|258584875|gb|EEW09607.1| glutamate racemase [Vibrio mimicus VM573]
Length = 265
Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 134/257 (52%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E++ + DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELENILHPL-----KHAIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGI--DKGEGENQKHHIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNIKLKELGFN 256
>gi|229095486|ref|ZP_04226477.1| Glutamate racemase [Bacillus cereus Rock3-29]
gi|228688032|gb|EEL41919.1| Glutamate racemase [Bacillus cereus Rock3-29]
Length = 275
Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IQSNMYEKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVLSFEHIAERWLGYE 259
>gi|210632427|ref|ZP_03297355.1| hypothetical protein COLSTE_01251 [Collinsella stercoris DSM 13279]
gi|210159522|gb|EEA90493.1| hypothetical protein COLSTE_01251 [Collinsella stercoris DSM 13279]
Length = 292
Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 100/259 (38%), Gaps = 18/259 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + +P YV D PYG + ++ ++ L
Sbjct: 5 ERPIGVFDSGLGGLTVARCIAESLPHESIYYVGDTKRCPYGVRSEEEVRAFVLQ-AGHWL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA + P + +G + P + A T++ + +L+TP T
Sbjct: 64 AEHDVKIMVIACNTATAAGLRIAQQILP-VPVIGVIAPGARAAINSTRTRKVGVLATPLT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC------------GIKIKEDEIKKE 179
+R + I + +++ + VE G E + E
Sbjct: 123 VRTGAYTRAIQDLDAGVNVYGCPAPSFVEIVERELATGAHLQERWLQDGDIFDTPENRAE 182
Query: 180 IEGCFIEKE--GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
+E G + D +VL CTH+PL+ R V + +++ R +L R
Sbjct: 183 VERTLAPIVEGGAQVDTVVLGCTHFPLLAGPIRHALGPDVRVVSSAEETTRELEDILRRR 242
Query: 238 NTHQT-RVFDDHALFLSGK 255
N H +
Sbjct: 243 NQLAGIGHRPTHRFATTSD 261
>gi|229137668|ref|ZP_04266273.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
gi|228645783|gb|EEL02012.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
Length = 283
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 106/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V +++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 15 HSVIGVLDSGVGGLTVAREIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 74 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE +++K+ + +
Sbjct: 133 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTKED 188
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++ CTHYPL+ ++ V + +++ A +L + +H F
Sbjct: 189 IDTLIPGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHQFF 248
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 249 TTGSVSSFEHIAERWLGYQ 267
>gi|332345964|gb|AEE59298.1| glutamate racemase MurI [Escherichia coli UMNK88]
Length = 262
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 81/254 (31%), Positives = 136/254 (53%), Gaps = 4/254 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTT 238
Query: 257 D-IAMRRLMQGFGL 269
+ + ++Q +G
Sbjct: 239 EAEQLLPVLQRYGF 252
>gi|26250744|ref|NP_756784.1| glutamate racemase [Escherichia coli CFT073]
gi|26111175|gb|AAN83358.1|AE016770_158 Glutamate racemase [Escherichia coli CFT073]
Length = 285
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 141/264 (53%), Gaps = 4/264 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ ++L+FDSG+G L V ++R L+P+ H+IY D+V FPYG + + +R++ +
Sbjct: 17 PSEPXPTVLVFDSGVGXLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIV 76
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + ++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T
Sbjct: 77 TAVQERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLAT 135
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 136 RGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKE 195
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+PL+ Q+ P +D+ +IARR LL +
Sbjct: 196 P--PDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANI 253
Query: 249 ALFLSGKPD-IAMRRLMQGFGLKS 271
A ++ P+ + ++Q +G ++
Sbjct: 254 AFCMAMTPEAEQLLPVLQRYGFET 277
>gi|329956144|ref|ZP_08296867.1| glutamate racemase [Bacteroides clarus YIT 12056]
gi|328524730|gb|EGF51788.1| glutamate racemase [Bacteroides clarus YIT 12056]
Length = 279
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R +PEY ++Y+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPEYDYVYLGDNARAPYGTRSFEVVYEFTLQAVTKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P+ LG + P ++ T+S + +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPHLDPARRVLGVIRPTVECIGNITRSRHVGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + + + S VE + I+K I
Sbjct: 129 TGGTIKSESYPLEIHKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFIRKYINELLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D +L CTHYP+++ RQ P + + +A + L R +
Sbjct: 187 KDREIDTAILGCTHYPILLPKIRQYMPDGITIVSQGKLVADSLKDYLRRHPEIDAKCTQG 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + + +
Sbjct: 247 GECTYYTTEAEEKFVE 262
>gi|262392932|ref|YP_003284786.1| glutamate racemase [Vibrio sp. Ex25]
gi|262336526|gb|ACY50321.1| glutamate racemase [Vibrio sp. Ex25]
Length = 267
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLISRVNQLVSSLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+ K + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGNSVSLDELTKILLPL-----RDKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI Q V +D+ +IARR + LL T +++
Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGEDVTLIDSGAAIARRVKALLLSDEIEDTEE-GSKSIYA 237
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ ++ G
Sbjct: 238 SATPWQEDALNICLKELGFN 257
>gi|317131748|ref|YP_004091062.1| glutamate racemase [Ethanoligenens harbinense YUAN-3]
gi|315469727|gb|ADU26331.1| glutamate racemase [Ethanoligenens harbinense YUAN-3]
Length = 271
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 12/260 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSG+GGL V++ + +P IY D PYG + + K
Sbjct: 1 MDNRP--------IGVFDSGLGGLTVIRALERTLPHEDLIYFGDTGRVPYGTKGNDTIVK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ L + +IACNT ++ +E+ + F PA++ A T+ G
Sbjct: 53 YSEQIV-RFLRGFDVKAILIACNTVSSVAFEEVCAQAGVPVFGVVEPAVEAAVRTTRGGE 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L T AT+R IH Y+ + + + VE + E+
Sbjct: 112 ILVLGTSATVRSGAYEQAIHRYLPDAGVRSRACPLFVPLVENGHFAAGDQLAELAAH--E 169
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
G+ D ++L CTHYP++ + ++ V+ +D+ +A RA +
Sbjct: 170 YLDSFIGQGVDTVILGCTHYPILRSLIAKIMGGQVELVDSGCEMAVRAAVAMDERGLLTD 229
Query: 243 RVFDDHA-LFLSGKPDIAMR 261
R ++S + R
Sbjct: 230 REEPGRQNFYVSDYSEDFTR 249
>gi|227524349|ref|ZP_03954398.1| glutamate racemase [Lactobacillus hilgardii ATCC 8290]
gi|227088580|gb|EEI23892.1| glutamate racemase [Lactobacillus hilgardii ATCC 8290]
Length = 264
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 9/253 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+++ ++P +I+V D PYG ++K + +L K
Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRKLTKRIADYML-KQNVK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNT+ D L+ P + +G + P + A A T + I +++T T+
Sbjct: 60 MFVIACNTSTAASLDYLKRILP-IPVIGVIAPGAESAVAATNNNKIGVIATNGTVSSGVY 118
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+I S + ++ + + VE G ++ +++ ++ K D +VL
Sbjct: 119 QRIIKSLDPKSDVYSLGCPDFVTMVEHGDAGSELAREKVSHQLAY----FHDKSIDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHALFLSGK 255
CTH+P++ + +D +D S A+ L + + ++ + F +G
Sbjct: 175 GCTHFPVLEAEIKGAVNSGIDLIDPGISTAKSVADYLRSHHQMRDSSQFPQIKSFFTTGN 234
Query: 256 PDIAMRRLMQGFG 268
+ + Q G
Sbjct: 235 QNDFTKIADQLLG 247
>gi|329947436|ref|ZP_08294640.1| glutamate racemase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328525186|gb|EGF52237.1| glutamate racemase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 280
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 12/257 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++D+
Sbjct: 1 MFDSGVGGLTVARSVLDQLPHERVLYIGDTANGPYGPRDIAEVRSLALSIMDELVDRG-V 59
Query: 78 VLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + + R + + + + PA + AA T++G + +++T T+
Sbjct: 60 KLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGRVGLIATRGTVD 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V + + E E+ E + D
Sbjct: 120 SRAYDDALQA-VPGVELFSQACPRFVELAERGVT----TGPEVLDVAEEYLAPIKAAGVD 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDHALF 251
++L CTHYPL+V + V + +SD A+ L R N + H
Sbjct: 175 TLILGCTHYPLLVGPISYVMGEEVALVTSSDETAKDVYRALARRNLLRGPEACEPRHEFR 234
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 235 STGDPEAFSVLARRFLG 251
>gi|262280557|ref|ZP_06058341.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262258335|gb|EEY77069.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 266
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 6/249 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ N I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNQKNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + + VIACNT + + +R+ ++ + PA+K A A T S I++L+T
Sbjct: 61 SNLVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAMTMSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ NLI +Y + LV + LA ++E E+K ++
Sbjct: 120 ATTVKGKNLQNLIETYAQNIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + ++ + L + ++ S+++ A+ R L + ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSNIIQDLVGSNIQIIEPSEAVTAQLIRQLNQYKLSSESPNEGN 235
Query: 248 HALFLSGKP 256
H ++ S P
Sbjct: 236 HIIWTSSDP 244
>gi|188994603|ref|YP_001928855.1| glutamate racemase [Porphyromonas gingivalis ATCC 33277]
gi|188594283|dbj|BAG33258.1| glutamate racemase [Porphyromonas gingivalis ATCC 33277]
Length = 274
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 12/257 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SI IFDSG GGL +L ++R LMPEY+F+Y+ D+ PYGN + K + +
Sbjct: 1 MNSSIGIFDSGYGGLTILSEIRRLMPEYNFVYLGDNARSPYGNRSYEVVYKFTLQAVRKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRST------FPSMAFLGAV-PAIKQAAAYTQSGLIS 124
+ P L ++ACNTA ++ P+ LG + P ++ T++ +
Sbjct: 61 FELGCP-LVILACNTASAKALRTIQQRDLPNMEDPTRRVLGIIRPTVEAVDEITRTKHVG 119
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T T+ I + + + + VE + I+K ++
Sbjct: 120 VLATQGTVSSHSYQLEIAKLFPEISVTEEACPMWVPLVETGESDSPGADYFIRKHLDSII 179
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D I+LACTHYPL+ ++L + + + +A + L R R+
Sbjct: 180 A--KDDTIDTIILACTHYPLLRPKMKRLLTPTIKLIAQGELVAHSLKDYLSRHPEMDRRI 237
Query: 245 F--DDHALFLSGKPDIA 259
+ + + PD
Sbjct: 238 EKGGKTSYYTTESPDKF 254
>gi|90581103|ref|ZP_01236903.1| glutamate racemase [Vibrio angustum S14]
gi|90437799|gb|EAS62990.1| glutamate racemase [Vibrio angustum S14]
Length = 270
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 126/221 (57%), Gaps = 6/221 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D+ L +R + S +++
Sbjct: 5 KKIVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELADNILIERTNHIVSALVE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+Y+ L VIACNTA T++ LR ++ +G VPAIK AA + + +I +L+TPAT++
Sbjct: 65 QYKADLVVIACNTASTIVLPTLRQNL-NIPIVGVVPAIKPAAKLSNTKVIGLLATPATVK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI+ + S C + ++ S L E+ G I +E+ + + ++ D
Sbjct: 124 REYTQQLINQFASDCEVKMIGSTRLVEMAEQKLRGESISLNELSEILAPW-----QQQVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
I+L CTH+PLI + + V +D+ +IA R LL
Sbjct: 179 SIILGCTHFPLIKEEIKAVLRNEVSVVDSGKAIALRVSSLL 219
>gi|323343637|ref|ZP_08083864.1| glutamate racemase [Prevotella oralis ATCC 33269]
gi|323095456|gb|EFZ38030.1| glutamate racemase [Prevotella oralis ATCC 33269]
Length = 280
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 104/269 (38%), Gaps = 17/269 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MK+ P I +FDSG GGL +L +R L+P Y ++Y+ D+ PYG+ +
Sbjct: 1 MKLSQVP------GPIGVFDSGYGGLTILHGIRQLLPRYDYMYLGDNARAPYGSRSFDVV 54
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL-RSTFPS----MAFLGAV-PAIKQA 114
+ + + + L ++ CNTA + R P LG + P +
Sbjct: 55 YEFTRQAVAKLFE-MGCHLVILGCNTASAKALRTIQRQDLPVWDAERRVLGVIRPTAEVI 113
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
T+S + +L+T T+R I + V + +E +
Sbjct: 114 GTLTKSRHVGLLATEGTVRSESYKLEIRKLYPDIKVTGVPCPLWVPIIENNEADSPGADY 173
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++K I + + D I+L CTHYPL++ + V + + +A+ + L
Sbjct: 174 FVQKSIHQ--LMTLDPQIDTIILGCTHYPLLMPKISKYVGKGVRVVPQGEYVAKSLKDYL 231
Query: 235 PRINTHQTR--VFDDHALFLSGKPDIAMR 261
R T + + F + P+
Sbjct: 232 HRHETIEKKCTKEGTCRYFTTENPEKFKE 260
>gi|227544196|ref|ZP_03974245.1| glutamate racemase [Lactobacillus reuteri CF48-3A]
gi|300908191|ref|ZP_07125657.1| glutamate racemase [Lactobacillus reuteri SD2112]
gi|227185832|gb|EEI65903.1| glutamate racemase [Lactobacillus reuteri CF48-3A]
gi|300894618|gb|EFK87974.1| glutamate racemase [Lactobacillus reuteri SD2112]
Length = 267
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V++ +R +P+ I+V D FPYG +++ + + +L
Sbjct: 3 KRPIGVMDSGLGGLSVIRVLREQLPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + +IACNTA L++ P + +G + AA I ++ T +T+
Sbjct: 63 EQ-DVKMMIIACNTATAAALRLLQNELP-IPVIGVIEPGAMAATQHHYKKIGVIGTESTI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + L S VE G E +K ++ + +
Sbjct: 121 KNGAYAKTLAKLNPDLSVISSPAQPLVSIVEHGQTGT----SEAQKAVDTELEVFDNQSI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ ++L CTH+P + V +D + R+A+ LL N + L+
Sbjct: 177 EALILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTGKNQLSDNLASSINLYS 236
Query: 253 SGKPDIAMRRLMQGF 267
+G + Q
Sbjct: 237 TGDAKDLVAGAQQWL 251
>gi|294674929|ref|YP_003575545.1| glutamate racemase [Prevotella ruminicola 23]
gi|294473325|gb|ADE82714.1| glutamate racemase [Prevotella ruminicola 23]
Length = 277
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 11/258 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + + + +
Sbjct: 7 GPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGPRSFDVVYEFTRQAVVKLFE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ CNTA ++ P LG + P + T S + +L+
Sbjct: 67 -MGCHLVILGCNTASAKALRTIQQNDLPKIDPERRVLGIIRPTAEVIGDLTTSKHVGVLA 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + V+ VE + +KK I+ I +
Sbjct: 126 TEGTIKSESYDLEIHKLFPDIKVSGVACPFWVPLVEYNEADSPGADYFVKKRIDE--IMR 183
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ D I+L CTHYPL++ + P V + + +A + L R + +
Sbjct: 184 KDPDIDTIILGCTHYPLLMPKILKYLPAGVRVVPQGEYVAESLKQYLERHPNIEAKCSKG 243
Query: 246 DDHALFLSGKPDIAMRRL 263
+ P+ +
Sbjct: 244 AGVHYLTTENPNKFKEQA 261
>gi|254725743|ref|ZP_05187525.1| glutamate racemase [Bacillus anthracis str. A1055]
Length = 276
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 104/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IQSNMYEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTFLQHKGILADNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259
>gi|121610154|ref|YP_997961.1| glutamate racemase [Verminephrobacter eiseniae EF01-2]
gi|121554794|gb|ABM58943.1| glutamate racemase [Verminephrobacter eiseniae EF01-2]
Length = 301
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 15/275 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
Q I +FDSG+GGL VL +R +P F+Y+AD PYG + R + + +
Sbjct: 18 PQQPIGVFDSGVGGLSVLHALRAALPRERFVYLADSANAPYGERAAAQVSARTLAITGYL 77
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ V+ACNTA DELR P + +G PA+K A A TQ+G + ++ T T
Sbjct: 78 RAQHRIKALVVACNTATAAAIDELRQRHPGLPLVGLEPALKPALALTQTGHVGVIGTRGT 137
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC------GIKIKEDEIKKEIEGC-F 184
L L+ S + H L LA +E G ++ +
Sbjct: 138 LGSAKFGKLLASLADRAHFVLQPCDGLAHAIERSVLSTAPVSGSTETGALCQRYLHAMGT 197
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
K + D +VL CTHY + R L V +++ +AR+ R LL + +
Sbjct: 198 FGKAPGQIDTLVLGCTHYLFVTDELRALLGPGVQFVETGAPVARQTRRLLETAGLLRNGL 257
Query: 245 FD--------DHALFLSGKPDIAMRRLMQGFGLKS 271
+ L +G + + GL +
Sbjct: 258 REPQAAAETAGTRLLTTGPAAMLQAAAQRWLGLPA 292
>gi|260556259|ref|ZP_05828478.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
gi|260410314|gb|EEX03613.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
Length = 288
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 7 PCEKKL-QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K L I IFDSGIGG+ V ++ +P +Y AD PYG D +++
Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124
D L + ++V+ACNTA D LR + +G VPA+K A T+S +++
Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+TPAT R +++ + + + ++S+ L VE + + +++ ++
Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ- 190
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYP + L +D+ ++AR+ +L +
Sbjct: 191 ---PAVEQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCD 247
Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265
+ + A ++SG A++ ++Q
Sbjct: 248 QTRQNVARIECYVSGNNADALQPVLQ 273
>gi|238021903|ref|ZP_04602329.1| hypothetical protein GCWU000324_01807 [Kingella oralis ATCC 51147]
gi|237866517|gb|EEP67559.1| hypothetical protein GCWU000324_01807 [Kingella oralis ATCC 51147]
Length = 266
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N I +FDSG+GGL V++ + +P + +Y D PYG ++ + +L
Sbjct: 4 NPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRSTIETFTAQIVDFLL- 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATL 132
+ Q VIACNT + ++ +M L + A QAA A T++G I +++T T+
Sbjct: 63 QNQVKALVIACNTIAAVAHQRVQQMAGNMPVLSVIEAGAQAALATTRNGNIGVIATSTTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + I ++ +L VEE ++ +++ + +K
Sbjct: 123 NSNAYARAISARNADTRILSQAAPLLVPLVEEGWLEHEVTRLTVREYLRPLLADK----I 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALF 251
D ++L CTH+PL+ + +Q +P ++ +D+S + A A L + T+ D+ +
Sbjct: 179 DTLILGCTHFPLLKPLIKQEAP-HIELVDSSTTTAEAAAQALATADLLNTQTAAPDYRFY 237
Query: 252 LSGKPDIAMRRLMQGFG 268
+S P + G
Sbjct: 238 VSDIPLRFQTIGERFLG 254
>gi|313828237|gb|EFS65951.1| glutamate racemase [Propionibacterium acnes HL063PA2]
gi|315110459|gb|EFT82435.1| glutamate racemase [Propionibacterium acnes HL030PA2]
Length = 284
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VEE E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ + +
Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDDVTLISSSHQCARASYSLMVESGLLHSHPRE 237
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|310778213|ref|YP_003966546.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
gi|309747536|gb|ADO82198.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
Length = 270
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 104/268 (38%), Gaps = 17/268 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN I +FDSG GGL V+++++ ++P Y D PYG+ +
Sbjct: 1 MDNR--------GIGVFDSGFGGLTVVKEIKKVLPGEKIYYFGDTARLPYGSKSKENIIH 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-KQAAAYTQSG 121
+ + + L V+ACNTA DEL+ S +G + A ++A T++G
Sbjct: 53 YSLEIA-EFLKTKDIKALVVACNTASAFALDELKKHC-SFPVIGVIEAGSRRALGITKNG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ I+ T T+ + ++ + VEE ++ E I + +
Sbjct: 111 KVGIIGTKGTVSSGVYDRSLSKGRKGIEVYSKPCPLFVPLVEEGMVQDEVTEIMIDRYLR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTH 240
+ D +++ CTHYPL+ ++ ++ ++ + A LL
Sbjct: 171 EF-----KNKVDSLIMGCTHYPLLEDEIKRYFEKYELEVVNPAVETALELEKLLAEKAIL 225
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ + ++S P+ G
Sbjct: 226 SKKSNGEIEFYVSDSPNHFKELGEMFLG 253
>gi|269968664|ref|ZP_06182661.1| glutamate racemase [Vibrio alginolyticus 40B]
gi|269826751|gb|EEZ81088.1| glutamate racemase [Vibrio alginolyticus 40B]
Length = 267
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLISRVNQLVSSLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + LV S L EE G + DE+ + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELVGSTRLVDMAEEKLRGNSVSLDELTNILLPL-----RDKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI Q V +D+ +IARR + LL T +++
Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGGDVTLIDSGAAIARRVKALLLSDEIEDTEE-GSKSIYA 237
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ ++ G
Sbjct: 238 SATPWQEDALNICLKKLGFN 257
>gi|217958454|ref|YP_002337002.1| glutamate racemase [Bacillus cereus AH187]
gi|217063367|gb|ACJ77617.1| glutamate racemase [Bacillus cereus AH187]
Length = 275
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 106/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V +++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVAREIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE +++K+ + +
Sbjct: 125 IKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++ CTHYPL+ ++ V + +++ A +L + +H F
Sbjct: 181 IDTLIPGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHQFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVSSFEHIAERWLGYQ 259
>gi|304385230|ref|ZP_07367575.1| glutamate racemase [Pediococcus acidilactici DSM 20284]
gi|304328437|gb|EFL95658.1| glutamate racemase [Pediococcus acidilactici DSM 20284]
Length = 265
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 17/267 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++ + LMP +++ D+ PYG + K
Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKAAKELMPNEAVVFIGDEARVPYGPRPTAEVIK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ ++ K VIACNTA L +T P + +G + P + A A T++
Sbjct: 53 FSQQMADFLVKK-DVKALVIACNTATNAAFQILSTTLP-IPVIGVIQPGAQAAVATTRNN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T T++ S + + Q + V+ E ++ E + I+
Sbjct: 111 RIGVIATEGTIKSQAYSTALAALAPQTEVFPVACQSFVELAEHN----QLTTPEALQVID 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + + D +VL CTH+PL+ + V +D + ++ + +L R +
Sbjct: 167 QQLVGLKNQGIDTLVLGCTHFPLLAKGIQTAVGDQVKLVDPGVAAVQQLKDVLERQGLLR 226
Query: 242 TRVF-DDHALFLSGKPDIAMRRLMQGF 267
D F + + R + Q F
Sbjct: 227 EATSTPDEQYFATANI-ASFRTIAQSF 252
>gi|295100376|emb|CBK97921.1| glutamate racemase [Faecalibacterium prausnitzii L2-6]
Length = 274
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 99/261 (37%), Gaps = 11/261 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSG+GGL ++++R +P + +Y D PYG+ + +
Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPNENIVYFGDTGRVPYGSRSPETILQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ +L K + AC T ++ + P A ++AA T++
Sbjct: 53 YARQDIAFLLSK-DVKCIMAACGTVSSIYPAAEAAKLPVPYLGVVDAAAREAAFVTRNRR 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI-KIKEDEIKK-EI 180
I ++ T AT+R ++ V I + VE + + ++ + I
Sbjct: 112 IGVIGTAATIRSRSYETVLRKLVPGVEITAQPCPLFVPLVEAGYVDHSALDKQQVTRLVI 171
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E D ++L CTHYPLI + V +D + + A L
Sbjct: 172 AQYLAEVREAGVDTLILGCTHYPLIKEMIGWYMGRNVTLVDPAQTAAHHLERTLSERGLK 231
Query: 241 QTRVFDDHALFLSGKPDIAMR 261
+ ++S PD +
Sbjct: 232 GNHEKGEAHFYVSDVPDSFAQ 252
>gi|34540498|ref|NP_904977.1| glutamate racemase [Porphyromonas gingivalis W83]
gi|34396811|gb|AAQ65876.1| glutamate racemase [Porphyromonas gingivalis W83]
Length = 274
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 12/257 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ SI IFDSG GGL +L ++R LMPEY+F+Y+ D+ PYGN + K + +
Sbjct: 1 MNPSIGIFDSGYGGLTILSEIRKLMPEYNFVYLGDNARSPYGNRSYEVVYKFTLQAVRKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRST------FPSMAFLGAV-PAIKQAAAYTQSGLIS 124
+ P L ++ACNTA ++ P+ LG + P ++ T++ +
Sbjct: 61 FELGCP-LVILACNTASAKALRTIQQRDLPNMEDPTRRVLGIIRPTVEAVDEITRTKHVG 119
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T T+ I + + + + VE + I+K ++
Sbjct: 120 VLATQGTVSSHSYQLEIAKLFPEISVTEEACPMWVPLVETGESDSPGADYFIRKHLDSII 179
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D I+LACTHYPL+ ++L + + + +A + L R R+
Sbjct: 180 A--KDDTIDTIILACTHYPLLRPKMKRLLTPTIKLIAQGELVAHSLKDYLSRHPEMDRRI 237
Query: 245 F--DDHALFLSGKPDIA 259
+ + + PD
Sbjct: 238 EKGGKTSYYTTESPDKF 254
>gi|332676074|gb|AEE72890.1| glutamate racemase [Propionibacterium acnes 266]
Length = 297
Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 17 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQ 76
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 77 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 135
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VE+ E++
Sbjct: 136 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 190
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ + D
Sbjct: 191 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESGLLHSHPRD 250
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 251 SSRYFLTTGNAERFEKLGRRLMEGF 275
>gi|229028645|ref|ZP_04184759.1| Glutamate racemase [Bacillus cereus AH1271]
gi|228732664|gb|EEL83532.1| Glutamate racemase [Bacillus cereus AH1271]
Length = 281
Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 10 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 69 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE +++K+ + +
Sbjct: 128 IQSNMYEKALHELDTYLEVHSHACPTLATVVENQLEDTAYVTEQVKQA----LLPLTKED 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 184 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDDLNPKHRFF 243
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 244 TTGYALSFGHIAERWLGYQ 262
>gi|115523653|ref|YP_780564.1| glutamate racemase [Rhodopseudomonas palustris BisA53]
gi|115517600|gb|ABJ05584.1| glutamate racemase [Rhodopseudomonas palustris BisA53]
Length = 278
Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats.
Identities = 107/257 (41%), Positives = 154/257 (59%), Gaps = 4/257 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL VL+++ L P+ H++YVADD FPYG + A+ R++ L +++
Sbjct: 5 PTILVFDSGLGGLTVLREITKLRPDAHYVYVADDAFFPYGQHGEEAIIARVVPLIGEMIA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L VIACNTA TL+ LR+ + + F+G VPAIK A A +QS +S+L T T++
Sbjct: 65 AHAPDLVVIACNTASTLVLSHLRAAY-GVPFVGTVPAIKPACAGSQSKRVSVLGTRGTVQ 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI--EKEGKR 191
R YT LI + C + LV S LA+ E G ++ + EI EI CF+ G R
Sbjct: 124 REYTKALIRDFAQNCAVTLVGSAHLAALAEAALGGAEVTDAEILAEIAPCFVAEPDHGPR 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD +VLACTHYPL++ +L+PWPV+W+D + +IARR LL + H R +
Sbjct: 184 TDTVVLACTHYPLLLDRLERLAPWPVNWIDPAPAIARRVSTLLAGVQGHADRAGAQM-IM 242
Query: 252 LSGKPDIAMRRLMQGFG 268
SG+P L+ FG
Sbjct: 243 TSGRPHPLASVLLPFFG 259
>gi|315093634|gb|EFT65610.1| glutamate racemase [Propionibacterium acnes HL060PA1]
Length = 284
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VEE E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ + +
Sbjct: 178 IQEADCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 237
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|262163706|ref|ZP_06031447.1| glutamate racemase [Vibrio mimicus VM223]
gi|262027922|gb|EEY46586.1| glutamate racemase [Vibrio mimicus VM223]
Length = 265
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V Q++ +P+ +IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYQEIEARLPQLSYIYLFDNAAYPYGELAQETLIARVNTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + ++ L+ S L + EE G + +E++ + DV
Sbjct: 127 YTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELESILHPL-----KHTIDVA 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 182 VLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGI--DKGEGENQKHHIYASAP 239
Query: 256 P--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 240 PWEESALNIKLKELGFN 256
>gi|289424939|ref|ZP_06426718.1| glutamate racemase [Propionibacterium acnes SK187]
gi|289154638|gb|EFD03324.1| glutamate racemase [Propionibacterium acnes SK187]
gi|313763385|gb|EFS34749.1| glutamate racemase [Propionibacterium acnes HL013PA1]
gi|313814691|gb|EFS52405.1| glutamate racemase [Propionibacterium acnes HL059PA1]
gi|314914537|gb|EFS78368.1| glutamate racemase [Propionibacterium acnes HL005PA4]
gi|314917605|gb|EFS81436.1| glutamate racemase [Propionibacterium acnes HL050PA1]
gi|314919639|gb|EFS83470.1| glutamate racemase [Propionibacterium acnes HL050PA3]
gi|314924269|gb|EFS88100.1| glutamate racemase [Propionibacterium acnes HL001PA1]
gi|314956853|gb|EFT01007.1| glutamate racemase [Propionibacterium acnes HL027PA1]
gi|314957644|gb|EFT01747.1| glutamate racemase [Propionibacterium acnes HL002PA1]
gi|314967393|gb|EFT11492.1| glutamate racemase [Propionibacterium acnes HL082PA2]
gi|314968973|gb|EFT13071.1| glutamate racemase [Propionibacterium acnes HL037PA1]
gi|315098010|gb|EFT69986.1| glutamate racemase [Propionibacterium acnes HL059PA2]
gi|315102644|gb|EFT74620.1| glutamate racemase [Propionibacterium acnes HL046PA1]
gi|315104465|gb|EFT76441.1| glutamate racemase [Propionibacterium acnes HL050PA2]
gi|315106208|gb|EFT78184.1| glutamate racemase [Propionibacterium acnes HL030PA1]
gi|327325474|gb|EGE67278.1| glutamate racemase [Propionibacterium acnes HL103PA1]
gi|327451223|gb|EGE97877.1| glutamate racemase [Propionibacterium acnes HL087PA3]
gi|327452580|gb|EGE99234.1| glutamate racemase [Propionibacterium acnes HL083PA2]
gi|328751976|gb|EGF65592.1| glutamate racemase [Propionibacterium acnes HL025PA2]
gi|328754780|gb|EGF68396.1| glutamate racemase [Propionibacterium acnes HL087PA1]
Length = 284
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VEE E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ + +
Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 237
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|237725975|ref|ZP_04556456.1| glutamate racemase [Bacteroides sp. D4]
gi|229435783|gb|EEO45860.1| glutamate racemase [Bacteroides dorei 5_1_36/D4]
Length = 281
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 11/270 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + +
Sbjct: 3 PSLPPSTGPIGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQ 62
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRS-TFPSM----AFLGAV-PAIKQAAAYTQS 120
S + + P L ++ACNTA ++ P + LG + P + T+S
Sbjct: 63 AVSKLFELGCP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRS 121
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ IL+T T++ IH + + + S VE + + +K+ I
Sbjct: 122 RHVGILATAGTIKSESYLLEIHKLSPDIVVTGEACPMWVSLVENNEYQSEGADYFVKQHI 181
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D I+L CTHYPL++ RQ +P + + + +AR + L R
Sbjct: 182 NRLL--DKDPMIDTIILGCTHYPLLLDKIRQFTPGHIRIIAQGEYVARSLQDYLNRHPEM 239
Query: 241 QTR--VFDDHALFLSGKPDIAMRRLMQGFG 268
R + + G
Sbjct: 240 DARCEKGGKCRFLTTESENKFEESASIFLG 269
>gi|329964674|ref|ZP_08301728.1| glutamate racemase [Bacteroides fluxus YIT 12057]
gi|328525074|gb|EGF52126.1| glutamate racemase [Bacteroides fluxus YIT 12057]
Length = 281
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 10/251 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILSKIRETLPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVTKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P LG + P ++ TQS I +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPRLDPMRRVLGVIRPTVECIGNITQSRHIGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ +H + + + VE + I+K I+
Sbjct: 129 TAGTIKSQSYPLEVHKLFPDIKVSGEACPLWVPLVENNEARGDGTDYFIRKYIDELLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246
+ + D ++L CTHYP+++ RQ P + + + +A+ + L R +
Sbjct: 187 KDNQIDTVILGCTHYPILLPKIRQYMPSGITTVAQGEFVAKSLKDYLQRHPEMDKKCTKG 246
Query: 247 DHALFLSGKPD 257
++ + + +
Sbjct: 247 GRCVYRTTEAE 257
>gi|315079376|gb|EFT51374.1| glutamate racemase [Propionibacterium acnes HL053PA2]
Length = 284
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VE+ E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ D
Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESGLLHPHPRD 237
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|282880529|ref|ZP_06289236.1| glutamate racemase [Prevotella timonensis CRIS 5C-B1]
gi|281305632|gb|EFA97685.1| glutamate racemase [Prevotella timonensis CRIS 5C-B1]
Length = 292
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 102/263 (38%), Gaps = 11/263 (4%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N + I +FDSG GGL +L +R L+P+Y F+Y+ D+ PYG + +
Sbjct: 8 NMAQLSRQPGPIGVFDSGYGGLTILHSIRRLLPQYDFLYLGDNARAPYGTRSFEVVYEFT 67
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYT 118
+ + + + L ++ CNTA ++ LG + P + T
Sbjct: 68 LQAVTKLFE-MGCHLVILGCNTASAKALRSIQQNDLPHLDAKRRVLGVIRPTAEIIGKLT 126
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
QS + +L+T T++ I + + V+ VE + +KK
Sbjct: 127 QSRHVGLLATEGTVKSESYPLEIQKFYPDIQVSGVACPFWVPLVEYNEANSPGADYFVKK 186
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
++ + D I+L CTHYPL++ + + V + + +AR + L R
Sbjct: 187 RMDALMA--KDGAIDTIILGCTHYPLLMAKIEKYNKPGVRIVAQGEYVARSLQDYLYRHP 244
Query: 239 THQTR--VFDDHALFLSGKPDIA 259
+ + F + P
Sbjct: 245 EMEEKCTKNGTCRYFTTENPARF 267
>gi|86148655|ref|ZP_01066936.1| glutamate racemase [Vibrio sp. MED222]
gi|85833574|gb|EAQ51751.1| glutamate racemase [Vibrio sp. MED222]
Length = 268
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 138/266 (51%), Gaps = 11/266 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ +Q +ILIFDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ +
Sbjct: 3 VSESIQKNILIFDSGVGGLSVYKEISHLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSI 62
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + + + VIACNTA T++ LR+ P + +G VPAIK A+ + + +++
Sbjct: 63 VASFVASHAIDIVVIACNTASTIVLPTLRANNP-IPIVGVVPAIKPASLL-ANKAVGLIA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT+ R YT LI ++ S + L+ S L E+ G I +E+++ ++
Sbjct: 121 TPATITREYTHELIKNFSSNKRVELLGSTQLVDMAEDKLRGEAINLEELQQILQPMI--- 177
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
DV VL CTH+PLI +Q+ V +D+ +IA+R + LL T
Sbjct: 178 --NTIDVAVLGCTHFPLIKSEIQQVLGKNVMLIDSGKAIAKRVQDLLDL--ESSTEEGGV 233
Query: 248 HALFLSGKP--DIAMRRLMQGFGLKS 271
F S P + A+ +++ G S
Sbjct: 234 REAFCSALPKKESALNSMLKRLGFSS 259
>gi|167838899|ref|ZP_02465676.1| glutamate racemase [Burkholderia thailandensis MSMB43]
Length = 290
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 71/258 (27%), Positives = 113/258 (43%), Gaps = 9/258 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P +YVAD + PYG +D + +R + + ++ +
Sbjct: 17 PIGIFDSGLGGLSVLRAVREQLPGEAIVYVADSLHAPYGPRDDAFIIERTLAIGEWLVAQ 76
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA +R P + +G P IK AA ++++ + +L+T ATLR
Sbjct: 77 GAKAL-VVACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATLRS 134
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
LI Y + C + L +E G E++ + G D
Sbjct: 135 ARFEALIARYAADCRFIRQAGHGLVEAIERGDTG----SPELRALLAGYLEPMLEAGADT 190
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHALF 251
+VL CTHYP + R ++ + +D D+IAR+ +L +R L
Sbjct: 191 LVLGCTHYPFLDAAIRDVTSNCLHLIDTGDAIARQLARILDERGLRAPASSRPAPLPRLC 250
Query: 252 LSGKPDIAMRRLMQGFGL 269
+ GL
Sbjct: 251 STSDGRHLQTLAATLLGL 268
>gi|325299201|ref|YP_004259118.1| Glutamate racemase [Bacteroides salanitronis DSM 18170]
gi|324318754|gb|ADY36645.1| Glutamate racemase [Bacteroides salanitronis DSM 18170]
Length = 275
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL +L K+R L+P+Y+++Y+ D+ PYG + + + +
Sbjct: 5 GPIGIFDSGYGGLTILAKIRELLPQYNYLYLGDNARTPYGTRSFEVVYEFTLQAVRKLFG 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
P L ++ACNTA ++ PS LG + P ++ A T + + +L+
Sbjct: 65 LGCP-LVILACNTASAKALRSIQQHDLPHLDPSRRVLGVIRPTVECIGALTHTRHVGLLA 123
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+R IH + + V + +E + ++K +
Sbjct: 124 TEGTVRSQSYPLEIHKLYADIRLTGVPCPMWVPLIENNEFNSPGADYFVQKYLGQLLS-- 181
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ D I+L CTHYPL++ R+ +P + ++ +A + L R +TR
Sbjct: 182 QDPEIDTIILGCTHYPLLLEKIRRYTPSHIRLVEQGKYVASSLKDYLARHPELRTRCETG 241
Query: 246 DDHALFLSGKPDIAMR 261
+ +
Sbjct: 242 GTCQFLTTESIEKFQE 257
>gi|262374074|ref|ZP_06067351.1| glutamate racemase [Acinetobacter junii SH205]
gi|262311085|gb|EEY92172.1| glutamate racemase [Acinetobacter junii SH205]
Length = 290
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL + Q++ +P +Y AD PYG D +++ + L
Sbjct: 20 DAPIGVFDSGIGGLSIAQEIASHLPNERILYYADTAHVPYGARSDQEIRELTAKAI-EWL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++V+ACNTA D LR + +G VPA+K A TQS ++++L+TPAT
Sbjct: 79 YRQGCKIAVVACNTASAFSLDYLREHYGEHFPIVGLVPALKPAVLQTQSKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R ++ + + + V+S+ L VE + E+
Sbjct: 139 FRGKLIKEVMLKFAEPAGVKVLTVTSLKLVPFVEAGEQ----MSEACLVELHNILQPVVD 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
+ D +VL CTHYP + RQ+ + +D+ ++AR+ +L + ++ +
Sbjct: 195 QGADFLVLGCTHYPFLKDAIRQIFNEKLKLIDSGQAVARQTAYILIKNRLLCDKISHNIT 254
Query: 248 -HALFLSGKPDIAMRRLMQGF 267
F+SG+ + ++ ++Q
Sbjct: 255 RIECFVSGQNAVELQPVVQHL 275
>gi|20807090|ref|NP_622261.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4]
gi|24418565|sp|Q8RC52|MURI2_THETN RecName: Full=Glutamate racemase 2
gi|20515581|gb|AAM23865.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4]
Length = 264
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 16/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D+ P I +FDSG+GGL VL+++ ++PE +IY D PYG+ ++
Sbjct: 1 MDSRP--------IGVFDSGVGGLTVLKRLIQVLPEEDYIYFGDTKRVPYGDRSKEEIEL 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + + +K VIACNT I + + F + T++
Sbjct: 53 FAGQIINFMKEK-NVKAVVIACNTTCATID---KGKYDIELFDVLKAGAESGVYCTKNKK 108
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +++T T+ I S Q ++ + +E+ + K +
Sbjct: 109 VGVIATKRTVESRSYEINIKSINPQIEVYQKACPEFVPLIEKGLYNSHLA----YKAAKD 164
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
C E +GK D ++L CTHYPL+ + + + V +D + ++ + L R
Sbjct: 165 CLEEFKGKEIDTLILGCTHYPLMEPIIKAIMGDGVKVVDPAVRLSHEVKEYLERSRILNF 224
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFG 268
F+SG + R G
Sbjct: 225 GKKGKIEFFVSGDAENFKRAAEMVLG 250
>gi|169831664|ref|YP_001717646.1| glutamate racemase [Candidatus Desulforudis audaxviator MP104C]
gi|229486275|sp|B1I4X2|MURI_DESAP RecName: Full=Glutamate racemase
gi|169638508|gb|ACA60014.1| glutamate racemase [Candidatus Desulforudis audaxviator MP104C]
Length = 273
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 105/264 (39%), Gaps = 12/264 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ++ +FDSG+GGL V++++ ++P IY D PYG+ L + +
Sbjct: 2 AKGTVGLFDSGVGGLTVVREVSVILPGKRVIYFGDTAHVPYGDKSVDELLSYAERIIGFL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ACNT+ + +R F P +A + +G I +++T AT
Sbjct: 62 CSQGA-DYIIFACNTSSAVSLRLMRDRFQVPMIGLIEPGAAEAVRLSATGRIGLIATEAT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + C + ++ L VE E +++ +E +
Sbjct: 121 VKAGAYARAVSALNRNCQVFSQAAPRLVPLVESGESDTPKAEQAVREYLE----PLREQG 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR-CLLPR------INTHQTRV 244
D ++L CTHYP + V ++ V +D + + R AR +L R +
Sbjct: 177 IDTLILGCTHYPFLRDVIERVLGPEVVLVDPAAATVRAARLDMLRRGFSADNPGAQGEQD 236
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
F+SG D Q G
Sbjct: 237 TVSLRYFVSGSADAFRAVAGQFLG 260
>gi|320451387|ref|YP_004203483.1| glutamate racemase [Thermus scotoductus SA-01]
gi|320151556|gb|ADW22934.1| glutamate racemase [Thermus scotoductus SA-01]
Length = 257
Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 17/262 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I +FDSG+GGL VL +R +P+ F+Y D PYG+ +++ +
Sbjct: 1 MKDPRRPIGVFDSGVGGLTVLSALRRALPQEDFLYFGDTARVPYGSKPLSMVRRFAWEIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+L + V+ACNTA + +L S+ G + + +AA G + ++ T
Sbjct: 61 GFLL-RQGVKAIVVACNTASSAALPDLAEDL-SVPVFGVLEPVAKAARGY--GKVGLIGT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ YV + + VEE + +D + + ++E
Sbjct: 117 QATVESRAY----ERYVGVS--WARACPLFVPLVEEG-----LWDDPVALLVARHYLEDA 165
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ + ++L CTHYP + ++ P V +D++++ A L
Sbjct: 166 PQDLEALILGCTHYPFLKGTLAKVLP-GVRLIDSAEATAEAVAKALKEEGLLNPEGQGRV 224
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
F++G P+ + + L + G++
Sbjct: 225 VHFVTGDPE-SYQNLAERLGVR 245
>gi|15605845|ref|NP_213222.1| glutamate racemase [Aquifex aeolicus VF5]
gi|6225737|sp|O66662|MURI_AQUAE RecName: Full=Glutamate racemase
gi|2983010|gb|AAC06621.1| glutamate racemase [Aquifex aeolicus VF5]
Length = 254
Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 15/253 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GG+ VL+ +R P +Y+ D PYG + + + + DK
Sbjct: 3 IGIFDSGAGGMTVLKAIREAYPNVDVVYLGDTARVPYGIRSKETIVRYSKECANFLKDKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +EL+ FP F P +K+A +++ I ++ T AT++
Sbjct: 63 -VDLLVVACNTASAYALEELKREFPFPVFGVIEPGVKEALRKSKTKRIGVIGTQATIKSG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + ++ + + VEE +I KK +E + +GK D +
Sbjct: 122 AYQEALKR--AGAEVYSKACPLFVPLVEEGMIEGEIP----KKVVEHYLKDFKGK-VDTL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ + V+ +D+S + A+ + + + L+ + +
Sbjct: 175 ILGCTHYPLLKREIQNFL-EGVNVIDSSRATAKSLKDFVKNEGS------GSLELYFTDR 227
Query: 256 PDIAMRRLMQGFG 268
R + G
Sbjct: 228 SQNLERLIKLILG 240
>gi|313812338|gb|EFS50052.1| glutamate racemase [Propionibacterium acnes HL025PA1]
Length = 284
Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VE+ E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ + D
Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMAESGLLHSHPRD 237
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|260774782|ref|ZP_05883684.1| glutamate racemase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609207|gb|EEX35362.1| glutamate racemase [Vibrio coralliilyticus ATCC BAA-450]
Length = 263
Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
LQ+ +LIFDSG+GGL V Q++ +P+ ++Y+ D+ +PYG + L R+ L S
Sbjct: 3 LQSKVLIFDSGVGGLSVFQEIEKKLPQLDYVYLFDNAAYPYGELDHETLVSRVEALVSQY 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ +Q L VIACNTA T++ LR T S+ +G VPAIK A+ + + +++TPAT
Sbjct: 63 VADHQVDLVVIACNTASTIVLPSLR-TLLSIPVVGVVPAIKPASNL-ANKAVGLIATPAT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + + L+ S L EE G + E+K + +
Sbjct: 121 VTRQYTQELIRDFSQSKPVELLGSTRLVDMAEEKLRGTPVSNQELKAVLSPMI-----GK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV VL CTH+PLI + + V +D+ ++IARR + LL + + + +F
Sbjct: 176 VDVAVLGCTHFPLIKEEIQSVLSEQVVLVDSGEAIARRVQELLNLEDKKEGKGL--REIF 233
Query: 252 LSGKP--DIAMRRLMQGFGLK 270
+ P + A+ R +Q G
Sbjct: 234 STAPPYAEGALNRALQNLGFS 254
>gi|228471912|ref|ZP_04056682.1| glutamate racemase [Capnocytophaga gingivalis ATCC 33624]
gi|228276764|gb|EEK15470.1| glutamate racemase [Capnocytophaga gingivalis ATCC 33624]
Length = 260
Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 9/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I +FDSG+GG + +++ +P +Y+AD + PYG + +
Sbjct: 1 MISPIGLFDSGVGGTTIWREVVRQLPWESTLYLADSLNAPYGEKSSEEIIALCEKNTEYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
LD + L ++ACNTA T LR+ + + F+G PAIK A Y+Q+ I +L+T +T
Sbjct: 61 LDHHS-KLIIVACNTATTNAITHLRAKYK-VPFIGIEPAIKPAGLYSQTKTIGVLATQST 118
Query: 132 LRRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L+ + +N ++ + L +EE KI E+ +E +
Sbjct: 119 LKSAFFANTCQQLLDKGINVLKQEGIGLVPLIEEG----KIDTPEMMALLEQYLRPMVAE 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDH 248
D +VL CTHYP + + ++ P V +D++ ++A++ +L + N + H
Sbjct: 175 GMDYLVLGCTHYPYLTSLISEILPENVRIMDSAQAVAKQTERILSQNNLLAKKEEHVPSH 234
Query: 249 ALFLSGKPDIAMRRLMQG 266
+ +I +G
Sbjct: 235 LWLTNKNAEILQSFAPEG 252
>gi|270290961|ref|ZP_06197184.1| glutamate racemase [Pediococcus acidilactici 7_4]
gi|270280357|gb|EFA26192.1| glutamate racemase [Pediococcus acidilactici 7_4]
Length = 265
Score = 274 bits (703), Expect = 6e-72, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 17/267 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++ + LMP +++ D+ PYG + K
Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKAAKELMPNEAVVFIGDEARVPYGPRPTAEVIK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ ++ K VIACNTA L +T P + +G + P + A A T++
Sbjct: 53 FSQQMADFLVKK-DVKALVIACNTATNAAFQILSTTLP-IPVIGVIQPGAQAAVATTRNN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T T++ S + + Q + V+ E ++ E + I+
Sbjct: 111 RIGVIATEGTIKSQAYSTALAALAPQTEVFPVACQSFVELAEHN----QLTTPEALQVID 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + + D +VL CTH+PL+ + V +D + ++ + +L R +
Sbjct: 167 QQLVGLKNQGIDTLVLGCTHFPLLAKGIQTAVGDRVKLVDPGVAAVQQLKDVLERQGLLR 226
Query: 242 TRVF-DDHALFLSGKPDIAMRRLMQGF 267
D F + + R + Q F
Sbjct: 227 EATSTPDEQYFATANI-ASFRTIAQSF 252
>gi|269128064|ref|YP_003301434.1| glutamate racemase [Thermomonospora curvata DSM 43183]
gi|268313022|gb|ACY99396.1| glutamate racemase [Thermomonospora curvata DSM 43183]
Length = 270
Score = 274 bits (703), Expect = 6e-72, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 99/258 (38%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V + + +P+ +Y+ D PYG ++ + + ++
Sbjct: 3 DAPIGIFDSGYGGLTVARAILDQLPDEPILYLGDSARQPYGPRPIAEVRAFALQMLDQLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACN+A + + R + PA ++AA T +G + +++T AT+
Sbjct: 63 AEG-VKMLVIACNSASAAMLRDARERYDVPIVEVIKPATRRAARATTNGRVGLIATHATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V+ VE E+
Sbjct: 122 TSRAYEDAFAA-APHIELTSVACPRFVEFVEAGITKGP----ELLSVARSYLQPIVDAGC 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHAL 250
D ++L CTHYPL++ + V + +++ A+ +L +T H
Sbjct: 177 DTLILGCTHYPLLIGAISYVVGDGVTLVSSAEETAKDVYRVLQDQGLARAETASPPVHRF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
++G P R + G
Sbjct: 237 LVTGDPAEFARLGRRFLG 254
>gi|284029805|ref|YP_003379736.1| glutamate racemase [Kribbella flavida DSM 17836]
gi|283809098|gb|ADB30937.1| glutamate racemase [Kribbella flavida DSM 17836]
Length = 290
Score = 274 bits (703), Expect = 6e-72, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 95/259 (36%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG GGL V + + +P +Y+ D PYG +++ + +
Sbjct: 25 ADAPIGIFDSGFGGLTVARAVLDQLPHEPILYLGDTARQPYGPKSIAEVREYALECLDHL 84
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ L VIACN+A + + R + +PA ++A A T++ + ++ T +T
Sbjct: 85 VEAGVKAL-VIACNSASAAMLRDARERYDVPVVEVILPAARRAVAATRNQRVGVICTRST 143
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + Q + + VE E+
Sbjct: 144 AASLAYDDAFAA-APQVELTTQACPKFVDFVESGVTSGP----ELLAAAHEYLDPLVEAG 198
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFDDHA 249
D ++L CTHYPL+ V + V + +++ A+ +L + T H
Sbjct: 199 VDTLILGCTHYPLLTGVISYVMGDEVTLVSSAEEGAKDVYGVLTKAGLLRDNTLPEPRHR 258
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P + G
Sbjct: 259 FVTTGDPADFAAIGSRFLG 277
>gi|282855013|ref|ZP_06264345.1| glutamate racemase [Propionibacterium acnes J139]
gi|282581601|gb|EFB86986.1| glutamate racemase [Propionibacterium acnes J139]
gi|314982112|gb|EFT26205.1| glutamate racemase [Propionibacterium acnes HL110PA3]
gi|315090351|gb|EFT62327.1| glutamate racemase [Propionibacterium acnes HL110PA4]
Length = 284
Score = 274 bits (703), Expect = 6e-72, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTMADVRRYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VEE E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ + +
Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 237
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|169634511|ref|YP_001708247.1| glutamate racemase [Acinetobacter baumannii SDF]
gi|239500887|ref|ZP_04660197.1| glutamate racemase [Acinetobacter baumannii AB900]
gi|169153303|emb|CAP02411.1| glutamate racemase [Acinetobacter baumannii]
gi|193076216|gb|ABO10839.2| glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 288
Score = 274 bits (703), Expect = 6e-72, Method: Composition-based stats.
Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 12/266 (4%)
Query: 7 PCEKKL-QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K L I IFDSGIGG+ V ++ +P +Y AD PYG D +++
Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124
D L + ++V+ACNTA D LR + +G VPA+K A T+S +++
Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+TPAT R +++ + + + ++S+ L VE + + +++ ++
Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ- 190
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYP + L +D+ ++AR+ +L +
Sbjct: 191 ---PAVEQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCD 247
Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265
++ + A ++SG A++ ++Q
Sbjct: 248 QIRQNVARIECYVSGNNADALQPVLQ 273
>gi|258647676|ref|ZP_05735145.1| glutamate racemase [Prevotella tannerae ATCC 51259]
gi|260852505|gb|EEX72374.1| glutamate racemase [Prevotella tannerae ATCC 51259]
Length = 285
Score = 274 bits (703), Expect = 7e-72, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 110/265 (41%), Gaps = 13/265 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ P I +FDSG GG+ +L++ + L+P+Y ++Y+ D+ PYG+ + +
Sbjct: 1 MSAQPIPAT--APIGVFDSGYGGMTILRQFKRLLPQYDYLYLGDNARAPYGSHSFEVIYQ 58
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS-----TFPSMAFLGAV-PAIKQAAA 116
+ + + P L ++ACNTA L+ +P LG + P ++ A
Sbjct: 59 YTLEAVEALFKRGCP-LVILACNTASAKALRTLQQNDLPARYPDRRVLGVIRPTVETVAG 117
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
TQS I +L T T+ + + ++ + VE Y + +
Sbjct: 118 LTQSHHIGLLGTVGTISSGSYTMEFAKIDPSAKLTGMACPMWVPLVENYEFDSPGADYFV 177
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+K ++ F + D ++L CTHYPL++ Q +P V ++ +A + + L R
Sbjct: 178 RKRLDALFES--DPQIDTLILGCTHYPLLLEKISQFTPPNVKIVEQGAYVAEKLQDYLQR 235
Query: 237 INTHQTRVF--DDHALFLSGKPDIA 259
+ R+ + D
Sbjct: 236 HPEMEVRLSRQGRSKYLTTESVDKF 260
>gi|148543776|ref|YP_001271146.1| glutamate racemase [Lactobacillus reuteri DSM 20016]
gi|184153182|ref|YP_001841523.1| glutamate racemase [Lactobacillus reuteri JCM 1112]
gi|227363244|ref|ZP_03847376.1| glutamate racemase [Lactobacillus reuteri MM2-3]
gi|325682148|ref|ZP_08161666.1| glutamate racemase [Lactobacillus reuteri MM4-1A]
gi|167017317|sp|A5VIY5|MURI_LACRD RecName: Full=Glutamate racemase
gi|229486242|sp|B2G6G1|MURI_LACRJ RecName: Full=Glutamate racemase
gi|148530810|gb|ABQ82809.1| glutamate racemase [Lactobacillus reuteri DSM 20016]
gi|183224526|dbj|BAG25043.1| glutamate racemase [Lactobacillus reuteri JCM 1112]
gi|227071700|gb|EEI09991.1| glutamate racemase [Lactobacillus reuteri MM2-3]
gi|324978792|gb|EGC15741.1| glutamate racemase [Lactobacillus reuteri MM4-1A]
Length = 267
Score = 274 bits (703), Expect = 7e-72, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V++ +R +P+ I+V D FPYG +++ + + +L
Sbjct: 3 KRPIGVMDSGLGGLSVIRVLREQLPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + +IACNTA L++ P + +G + AA I ++ T +T+
Sbjct: 63 EQ-DVKMMIIACNTATAAALRLLQNELP-IPVIGVIKPGAMAATQHHYKKIGVIGTESTI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + L S VE G E +K ++ + +
Sbjct: 121 KNGAYAKTLAKLNPDLSVISSPAQPLVSIVEHGQTGT----SEAQKAVDTELEVFDNQSI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ ++L CTH+P + V +D + R+A+ LL N + L+
Sbjct: 177 EALILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTGKNQLSDNLASSINLYS 236
Query: 253 SGKPDIAMRRLMQGF 267
+G + Q
Sbjct: 237 TGDAKDLVAGAQQWL 251
>gi|189462010|ref|ZP_03010795.1| hypothetical protein BACCOP_02682 [Bacteroides coprocola DSM 17136]
gi|189431224|gb|EDV00209.1| hypothetical protein BACCOP_02682 [Bacteroides coprocola DSM 17136]
Length = 276
Score = 274 bits (703), Expect = 7e-72, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R L+P+Y +IY+ D+ PYG + + + + D
Sbjct: 6 GPIGVFDSGYGGLTILDKIRELLPQYDYIYLGDNARTPYGTRSFEVVYEFTLQAVRKLFD 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-FPSM----AFLGAV-PAIKQAAAYTQSGLISILS 127
P L ++ACNTA ++ P + LG + P + T S + +L+
Sbjct: 66 LGCP-LVILACNTASAKALRSIQENDLPHIDATRRVLGVIRPTAECIGDITVSRHVGLLA 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ +H + V+ + VE + +++ I +
Sbjct: 125 TAGTVKSQSYPIELHKLFPDIQLTGVACPLWVPLVENNEFNSPGADYFVQEYINQLL--E 182
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D I+L CTHYPL++ RQ +P + + + +A + L R + +TR
Sbjct: 183 QDPKIDTIILGCTHYPLLIEKIRQFTPPHIRLVAQGEYVAASLKDYLRRHSEIRTRCTAG 242
Query: 246 DDHALFLSGKPDIAMRRLM 264
+ +
Sbjct: 243 GTCEFLTTESVEKFQEAAS 261
>gi|88801356|ref|ZP_01116884.1| glutamate racemase [Polaribacter irgensii 23-P]
gi|88782014|gb|EAR13191.1| glutamate racemase [Polaribacter irgensii 23-P]
Length = 266
Score = 274 bits (703), Expect = 7e-72, Method: Composition-based stats.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 8/253 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I FDSGIGG V +++ L+P + IY++D PYG + +L
Sbjct: 5 NSPIGFFDSGIGGTSVWKEVIKLLPNENTIYLSDSENAPYGEKSADEIILLSRKNTDFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K L ++ACNTA T LR + ++ F+G PAIK A+ T++ I +L+T TL
Sbjct: 65 -KENCKLIIVACNTATTNAITFLRDAY-AIPFIGIEPAIKPASLITKTNKIGVLATQGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + L + +E ++ +E + +
Sbjct: 123 NSALFEKTSLPIRNTIQIQETNGKGLVTLIENG----QLNSEETRALLTVYLAPMLANNI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHAL 250
D +VL CTHYP ++ R++ V +D+ +++A++ + +L + + + +H L
Sbjct: 179 DSLVLGCTHYPYLIPQIREIIGPDVQIIDSGEAVAKQTKAILLKHKILNSDQKHTANHKL 238
Query: 251 FLSGKPDIAMRRL 263
+++ + +
Sbjct: 239 YINKDKKALEKLI 251
>gi|323174290|gb|EFZ59916.1| glutamate racemase [Escherichia coli LT-68]
Length = 262
Score = 274 bits (703), Expect = 7e-72, Method: Composition-based stats.
Identities = 81/256 (31%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GG+ V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGVSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|301156626|emb|CBW16097.1| glutamate racemase [Haemophilus parainfluenzae T3T1]
Length = 263
Score = 274 bits (703), Expect = 8e-72, Method: Composition-based stats.
Identities = 79/259 (30%), Positives = 134/259 (51%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L FDSG+GGL V ++ + LMP+ H++Y D+ GFPY + + +R + + I
Sbjct: 3 KPTVLFFDSGMGGLSVYREAKKLMPDNHYLYCFDNAGFPYSEKSEETIIQRTLDICKKIN 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y VIACNTA T++ LR F S+ +G VPAIK AA +Q+ I +L+T T+
Sbjct: 63 QNYPLDAIVIACNTASTVVLPPLREQF-SIPIVGTVPAIKPAAEISQTKHIGLLATKGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R Y ++LIH + S C + + S L E G + +K E+ +
Sbjct: 122 KRPYVNDLIHQFASHCIVERLGSTKLVEIAEHKIQGKSVDLIALKNELSPW---ASIENL 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I L CTH+PLI + P +++D +IA+R + LL ++ Q++ + +F
Sbjct: 179 DTICLGCTHFPLIKDEIQICLPQVKNFMDPGFAIAKRLQFLLDKLEV-QSKSEVKNQVFC 237
Query: 253 SGKPDI--AMRRLMQGFGL 269
+ + + + + +G
Sbjct: 238 TQDVENKHQLEQALALWGF 256
>gi|319900213|ref|YP_004159941.1| glutamate racemase [Bacteroides helcogenes P 36-108]
gi|319415244|gb|ADV42355.1| glutamate racemase [Bacteroides helcogenes P 36-108]
Length = 281
Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 107/261 (40%), Gaps = 10/261 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P LG + P +++ T++ + +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPHLDPMRRVLGVIRPTVERIGDITKNRHVGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ IH + + + VE + I+K I
Sbjct: 129 TAGTIKSGSYPLEIHKLFPDIRVSGEACPMWVYLVENNEAQGDGTDYFIRKYINSLLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246
+ ++ D ++L CTHYPL++ R+ P + + + +A + L R +
Sbjct: 187 KDRQVDTVILGCTHYPLLLPKIRRYMPEGITTVTQGELVAESLKDYLRRHPEMDKKCTKG 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
++ + + + F
Sbjct: 247 GRCVYRTTEAEEKFTESASTF 267
>gi|260549201|ref|ZP_05823422.1| glutamate racemase [Acinetobacter sp. RUH2624]
gi|260407929|gb|EEX01401.1| glutamate racemase [Acinetobacter sp. RUH2624]
Length = 288
Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 123/263 (46%), Gaps = 11/263 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSGIGG+ V ++ +P H +Y AD PYG D +++
Sbjct: 16 KASADAPIGIFDSGIGGMSVAAEIARYLPNEHIVYYADTAYVPYGPRSDEEIRELTARAV 75
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILS 127
D L + ++V+ACNTA D LR + +G VPA+K A T+S ++++L+
Sbjct: 76 -DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLA 134
Query: 128 TPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
TPAT R +++ + + + ++++ L VE + + +K+ ++
Sbjct: 135 TPATFRGQLIKDVVEKFAVPAGVKVMTLTNLELVPCVEAGQQMSPVCLNALKEVLQ---- 190
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +VL CTHYP + L +D+ ++AR+ +L + ++
Sbjct: 191 PAADQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIR 250
Query: 246 DDHA---LFLSGKPDIAMRRLMQ 265
+ A ++SG A++ ++Q
Sbjct: 251 QNVARIECYVSGNNAEALQPVLQ 273
>gi|212695391|ref|ZP_03303519.1| hypothetical protein BACDOR_04940 [Bacteroides dorei DSM 17855]
gi|237711572|ref|ZP_04542053.1| glutamate racemase [Bacteroides sp. 9_1_42FAA]
gi|265753000|ref|ZP_06088569.1| glutamate racemase [Bacteroides sp. 3_1_33FAA]
gi|212662026|gb|EEB22600.1| hypothetical protein BACDOR_04940 [Bacteroides dorei DSM 17855]
gi|229454267|gb|EEO59988.1| glutamate racemase [Bacteroides sp. 9_1_42FAA]
gi|263236186|gb|EEZ21681.1| glutamate racemase [Bacteroides sp. 3_1_33FAA]
Length = 281
Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 11/270 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + +
Sbjct: 3 PSLPPSTGPIGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQ 62
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRS-TFPSM----AFLGAV-PAIKQAAAYTQS 120
S + + P L ++ACNTA ++ P + LG + P + T+S
Sbjct: 63 AVSKLFELGCP-LVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRS 121
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ IL+T T++ IH + + + S VE + + +K+ I
Sbjct: 122 RHVGILATAGTIKSESYLLEIHKLSPDIVVTGEACPMWVSLVENNEYQSEGADYFVKQHI 181
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D I+L CTHYPL++ RQ +P + + + +AR + L R
Sbjct: 182 NRLL--DKDPVIDTIILGCTHYPLLLDKIRQFTPGHIRIIAQGEYVARSLQDYLNRHPEM 239
Query: 241 QTR--VFDDHALFLSGKPDIAMRRLMQGFG 268
R + + G
Sbjct: 240 DARCEKGGKCRFLTTESENKFEESASIFLG 269
>gi|50843138|ref|YP_056365.1| glutamate racemase [Propionibacterium acnes KPA171202]
gi|50840740|gb|AAT83407.1| glutamate racemase [Propionibacterium acnes KPA171202]
Length = 297
Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 17 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 76
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 77 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 135
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VEE E++
Sbjct: 136 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEEGITSGP----ELEAIAREYLAP 190
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ + +
Sbjct: 191 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 250
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 251 SSRYFLTTGNAERFEKLGRRLMEGF 275
>gi|228938111|ref|ZP_04100731.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228970986|ref|ZP_04131623.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228977589|ref|ZP_04137981.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228782233|gb|EEM30419.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228788795|gb|EEM36737.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228821596|gb|EEM67601.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326938613|gb|AEA14509.1| glutamate racemase [Bacillus thuringiensis serovar chinensis CT-43]
Length = 276
Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKEKIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE I + ++++ + +
Sbjct: 125 IKSNMYEKALHELDTYLEVHSHACPTLATVVENRLEDI----AYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVLSFEHIAERWLGYQ 259
>gi|167588983|ref|ZP_02381371.1| glutamate racemase [Burkholderia ubonensis Bu]
Length = 285
Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 69/251 (27%), Positives = 107/251 (42%), Gaps = 6/251 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + + L
Sbjct: 15 APVGVFDSGLGGLSVLRAVRAQLPGESFVYVADSRNAPYGPRDEAFITERTLAI-GEWLA 73
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA +R ++ +G P IK AAA + SG+ +L+T +TL
Sbjct: 74 REGAKALVVACNTATAQSIAAIRERL-AIPLVGVEPGIKPAAALSASGIAGVLATQSTLA 132
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ Y + C L VE ++ ++G D
Sbjct: 133 SARFQALLDRYGAGCRFICQPGHGLVEAVERGDTN----SPALRALLDGYLQPMLDAGAD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP R L + +D SD+IAR+ +L F S
Sbjct: 189 TLVLGCTHYPFFTETIRDLFGDRLTIVDTSDAIARQLARVLDERGLRAPAGTRAPPRFCS 248
Query: 254 GKPDIAMRRLM 264
+R L
Sbjct: 249 TSDGRQLRALA 259
>gi|149278811|ref|ZP_01884946.1| glutamate racemase [Pedobacter sp. BAL39]
gi|149230430|gb|EDM35814.1| glutamate racemase [Pedobacter sp. BAL39]
Length = 276
Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 11/266 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ SI IFDSG GGL V + + +P+Y++IY+ D+ PYG+ + + +
Sbjct: 2 NISQSIGIFDSGFGGLTVFKSIAQKLPQYNYIYLGDNSRAPYGDRSFETVYRYTLECVEW 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRS-----TFPSMAFLGAV-PAIKQAAAYTQSGLIS 124
+ + P L ++ACNTA ++ +P LG + P + Y+ S I
Sbjct: 62 LFGQGCP-LVILACNTASAKALRSIQQKVLPFKYPDRRVLGVIRPTAEVVGNYSNSRTIG 120
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
++ T T++ + + + + S + +E + + +KK +
Sbjct: 121 VMGTRGTVKSESYLIEVAKFFPEIKVLQQSCPLWVPLIENNEHIHEGADYFLKKYLGQLL 180
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + D I+LACTHYPL++ R L P V L + +A L R + R+
Sbjct: 181 AKDDA--IDCILLACTHYPLLIPKLRALLPEKVALLGQGEIVADSLVDYLERHPEMKDRL 238
Query: 245 FDDH--ALFLSGKPDIAMRRLMQGFG 268
D F SG + ++ FG
Sbjct: 239 ARDREMRFFTSGDTSVFDQQASIFFG 264
>gi|325577829|ref|ZP_08148104.1| glutamate racemase [Haemophilus parainfluenzae ATCC 33392]
gi|325160574|gb|EGC72700.1| glutamate racemase [Haemophilus parainfluenzae ATCC 33392]
Length = 263
Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats.
Identities = 78/259 (30%), Positives = 135/259 (52%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++++L FDSG+GGL V ++ + LMP+ H++Y D+ GFPY + + +R + + I
Sbjct: 3 KSTVLFFDSGMGGLSVYREAKKLMPDNHYLYCFDNAGFPYSEKSEETIIQRTLDICKKIN 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y VIACNTA T++ LR F S+ +G VPAIK AA +Q+ I +L+T T+
Sbjct: 63 QDYPLDAIVIACNTASTVVLPPLREQF-SIPIVGTVPAIKPAAEISQTKHIGLLATKGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R Y ++LIH + S C + + S L E G + +K E+ +
Sbjct: 122 KRPYVNDLIHQFASHCVVERLGSTKLVEIAEHKIQGKSVDLIALKNELTPW---ASIENL 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I L CTH+PLI + P +++D +IA+R + LL ++ +++ + +F
Sbjct: 179 DTICLGCTHFPLIKDEIQICLPQVKNFMDPGFAIAKRLQFLLDKLEV-RSKSEMKNQVFC 237
Query: 253 SGKPD--IAMRRLMQGFGL 269
+ + + + + +G
Sbjct: 238 TQDVENKYQLEQALALWGF 256
>gi|254497879|ref|ZP_05110644.1| glutamate racemase [Legionella drancourtii LLAP12]
gi|254352877|gb|EET11647.1| glutamate racemase [Legionella drancourtii LLAP12]
Length = 270
Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 10/251 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q ++ +FDSG+GGL VL+ ++ +P FIY+ D PYG +K+ M + ++
Sbjct: 5 QLAVGVFDSGMGGLTVLRALKESLPHESFIYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPAT 131
+++ VIACNTA T L+S P M LG +P A A T++ +++L+T T
Sbjct: 65 ERH-IKALVIACNTATTAALPYLQSMLPDMPILGVVIPGASAAVAATKNQRVAVLATETT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ LI + Q I + +L + EE +I + +K ++G E
Sbjct: 124 IASKAYQELIARQLPQAVISTRACSVLVALAEEGMINNQIAREALKHYLDGFNDE----- 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HA 249
D +L CTH+P+ + L P + +D++ + A LL + N ++ +
Sbjct: 179 -DTFLLGCTHFPVFKSLLVDLLPEGIAVVDSAHATANSLYSLLQKQNLLNDKMLGNGSVN 237
Query: 250 LFLSGKPDIAM 260
++
Sbjct: 238 YLVTDSIKRFQ 248
>gi|227875772|ref|ZP_03993900.1| glutamate racemase [Mobiluncus mulieris ATCC 35243]
gi|269977417|ref|ZP_06184389.1| glutamate racemase [Mobiluncus mulieris 28-1]
gi|306819045|ref|ZP_07452762.1| glutamate racemase [Mobiluncus mulieris ATCC 35239]
gi|307700282|ref|ZP_07637322.1| glutamate racemase [Mobiluncus mulieris FB024-16]
gi|227843714|gb|EEJ53895.1| glutamate racemase [Mobiluncus mulieris ATCC 35243]
gi|269934333|gb|EEZ90895.1| glutamate racemase [Mobiluncus mulieris 28-1]
gi|304648238|gb|EFM45546.1| glutamate racemase [Mobiluncus mulieris ATCC 35239]
gi|307614493|gb|EFN93722.1| glutamate racemase [Mobiluncus mulieris FB024-16]
Length = 293
Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats.
Identities = 60/288 (20%), Positives = 111/288 (38%), Gaps = 38/288 (13%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +Y+ D PYG +K + + ++
Sbjct: 3 NAPIGIFDSGLGGLTVARAIIDQLPGESVVYIGDTANSPYGTKPVETVKHLALNVMDKLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+ + + VIACNTA + + R+ + + L + PA+ +A + T +G I +++T
Sbjct: 63 E-HGVKILVIACNTASAAVLFDARARYDRLGIPVLEVISPAVHRAVSATHNGKIGVIATS 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + +Y Q + + VE E+ + +
Sbjct: 122 TTIATGTYQRALGAY-QQVEVTAQACPAFVEFVERGITSG----SELLAKAREYLEPVKA 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPR------------ 236
D +VL CTHYPL+ V + V + +S+ AR R LL
Sbjct: 177 GGVDTLVLGCTHYPLLTGVINYVMGSEVTLVSSSEETARDVYRTLLENDWLNEDDATGEI 236
Query: 237 ----INTHQT------------RVFDDHALFLSGKPDIAMRRLMQGFG 268
+N ++ + + + +G ++ R + G
Sbjct: 237 NFSALNGGESGAVVESDSPVALKQSNRYQFLATGNTEVFTRLARRFLG 284
>gi|121605775|ref|YP_983104.1| glutamate racemase [Polaromonas naphthalenivorans CJ2]
gi|120594744|gb|ABM38183.1| glutamate racemase [Polaromonas naphthalenivorans CJ2]
Length = 272
Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats.
Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 13/269 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I +FDSGIGGL VL+ +R MP HFIY+AD PYG + + R + +
Sbjct: 1 MDRAIGVFDSGIGGLSVLKALRAAMPHEHFIYIADSGHAPYGERDVAHVLARSRAIVQYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ L V+ACNTA LR+ P +A +G PA+K AA TQ+G I +++T +T
Sbjct: 61 VNQNVKAL-VMACNTATAAAIHLLRTEHPGLALIGVEPALKPAAGRTQTGRIGVMATRST 119
Query: 132 LRRTYTSNLIHSYVSQ---CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
L L+ + + LA +E A + +I
Sbjct: 120 LASAKFQALLAAQSGGPQKVEFIVQPCDGLAHAIEASADTGDATRTI---ALCAHYISAM 176
Query: 189 GK------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
G+ + D +VL CTHYP R L V ++DN +++AR+ LLP
Sbjct: 177 GRFGTETGQIDTLVLGCTHYPFASEHLRALVGAQVQFIDNGEAVARQTLRLLPASVMAAN 236
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
+LF +G+PD + GL +
Sbjct: 237 APPGRVSLFTTGQPDTLQAAAQRWLGLSA 265
>gi|209696283|ref|YP_002264214.1| glutamate racemase [Aliivibrio salmonicida LFI1238]
gi|226707584|sp|B6ENT1|MURI_ALISL RecName: Full=Glutamate racemase
gi|208010237|emb|CAQ80568.1| glutamate racemase [Aliivibrio salmonicida LFI1238]
Length = 265
Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats.
Identities = 85/260 (32%), Positives = 140/260 (53%), Gaps = 9/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +ILIFDSGIGGL V + +R+ +P +IY D+ GFPYG + L +R ++ +
Sbjct: 1 MPKNILIFDSGIGGLSVFKDIRYQIPLAKYIYAFDNAGFPYGELTEDILIERTSYIIQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + VIACNTA T++ LR T S+ +G VPAIK AA +Q I +L+TPAT
Sbjct: 61 CHRHKIDIVVIACNTASTVVLPTLR-TLLSIPVVGVVPAIKPAALVSQ--KIGLLATPAT 117
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT +LI S+ S + L+ S L EE GI + E+ + ++ +
Sbjct: 118 IKRSYTFDLIKSFASISDVKLLGSTRLVEMAEEKMVGIPVNLIELDEILKSW-----KGQ 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D IVL CTH+P + +++ V +D+ ++IARR + LL ++ ++
Sbjct: 173 VDCIVLGCTHFPFLRKEIKEILGRNVLLIDSGEAIARRVKQLLGSVDANKGDHLFGEVYC 232
Query: 252 -LSGKPDIAMRRLMQGFGLK 270
S K + A+ + +
Sbjct: 233 SASTKNEEALNKTFKELDFN 252
>gi|282877118|ref|ZP_06285960.1| glutamate racemase [Prevotella buccalis ATCC 35310]
gi|281300800|gb|EFA93127.1| glutamate racemase [Prevotella buccalis ATCC 35310]
Length = 279
Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 11/251 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG + + + +
Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGTRSFDVVYEFTRQAVVKLFE 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-FPSM----AFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ CNTA ++ PS+ LG + P + + T+S + +L+
Sbjct: 69 -MGCHLVILGCNTASAKALRTIQQHDLPSLDSNRRVLGVIRPTAEVIGSLTKSRHVGLLA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ I + + ++ VE + +KK ++ + +
Sbjct: 128 TEGTVKSESYQLEIQKFFPDIQVSGIACPFWVPLVEYNEADSPGADYFVKKRLDA--LAQ 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ D I+L CTHYPL++ + V + + +A + L R +
Sbjct: 186 KDPLIDTIILGCTHYPLLMPKIEKYKRPGVRIVAQGEYVANSLKDYLKRHPEMNEKCTKT 245
Query: 246 DDHALFLSGKP 256
F + P
Sbjct: 246 GSCQYFTTENP 256
>gi|254470122|ref|ZP_05083526.1| glutamate racemase [Pseudovibrio sp. JE062]
gi|211960433|gb|EEA95629.1| glutamate racemase [Pseudovibrio sp. JE062]
Length = 257
Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 97/247 (39%), Positives = 149/247 (60%), Gaps = 4/247 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E + +L+ DSG+GGL V ++++ +P+ +Y+AD FPYG+WE AL+ + L
Sbjct: 15 MEPDVSGRVLVLDSGVGGLSVQREIKRALPDAGLLYLADRAAFPYGDWEADALRDHIASL 74
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + D +QP V+ACNTA TL+ LR F + +G VPAIK AA T+SG+ ++L+
Sbjct: 75 VNSVSDVWQPSAVVVACNTASTLVLQRLRE-FLDVPVVGTVPAIKPAAQKTKSGVFAVLA 133
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP T++R YT +LI + + HI LV + LA+ E+ + D ++ EI CF+EK
Sbjct: 134 TPGTVKRDYTQDLIIDFAPEHHIALVGATGLAALAEDKLASRAVDLDRLRHEIAPCFVEK 193
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
G+RTD +VL CTHYP + Q++PWPV W+D + +IARR +L R + V +
Sbjct: 194 SGERTDCVVLGCTHYPFLQEEMEQVAPWPVTWIDPAPAIARRLTDVLERDHV---AVGCE 250
Query: 248 HALFLSG 254
F++G
Sbjct: 251 DLFFVTG 257
>gi|51244544|ref|YP_064428.1| glutamate racemase [Desulfotalea psychrophila LSv54]
gi|50875581|emb|CAG35421.1| probable glutamate racemase [Desulfotalea psychrophila LSv54]
Length = 295
Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 7/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I IFDSG+GGL V K++ L+P IY AD PYG ++ R + +
Sbjct: 20 KAKKPIGIFDSGVGGLSVALKIKELLPREDLIYFADTGFSPYGTKPAELIRSRAKHITAF 79
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ K V+ACNTA LR+T ++ +G P I+ A ++SG+I +L+T
Sbjct: 80 LIKKG-CKAIVVACNTATANAIAYLRAT-SNIPIIGVEPGIRPAVQQSKSGIIGVLATRQ 137
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ + L + + I + + L VE + +E + IEG
Sbjct: 138 TLKSSSFQTLKKRFAGKSQIEIQACPRLVELVEAG----NLTGNETTEAIEGYVEPLLRA 193
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA 249
D IVL CTHY + +++ +D S + + + L + T+
Sbjct: 194 GADYIVLGCTHYLFLAPSIKKIISGRAQLIDTSVPVTQELKKQLAISSLLSPTKRDGRTE 253
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ SG ++ Q +G
Sbjct: 254 FWTSGNQTEVTAQISQLWG 272
>gi|229074552|ref|ZP_04207581.1| Glutamate racemase [Bacillus cereus Rock4-18]
gi|228708672|gb|EEL60816.1| Glutamate racemase [Bacillus cereus Rock4-18]
Length = 275
Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVKEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ VE + ++++ + +
Sbjct: 125 IQSNMYEKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 241 TTGSVLSFEHIAERWLGYE 259
>gi|157377467|ref|YP_001476067.1| glutamate racemase [Shewanella sediminis HAW-EB3]
gi|157319841|gb|ABV38939.1| Glutamate racemase [Shewanella sediminis HAW-EB3]
Length = 282
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 84/273 (30%), Positives = 131/273 (47%), Gaps = 17/273 (6%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ L IL+FDSGIGGL + ++R ++P+ + Y+ D+ PYG ++ L L +
Sbjct: 7 RDLSGPILVFDSGIGGLSIFDEIRQVLPDKQYCYLFDNARLPYGELDEQVLISGCKALIT 66
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I+ L VIACNTA TL+ LR ++ +G VPAIK AAA +++ I +L+TP
Sbjct: 67 SIVKMIDASLIVIACNTASTLVLPALREVL-NIPVVGVVPAIKPAAALSRNKHIGVLATP 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+RR YT LI + C + L S L E A GI I I+ +I +
Sbjct: 126 GTIRRPYTHELIEQFGGDCKVELYGSSELVILSERKAAGIDI----IQADIAKILNPIKC 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRINTHQTRVFD 246
D +VL CTH+P++ + V LD++ ++A R L L N ++ D
Sbjct: 182 SGLDTLVLGCTHFPMLKVEIQDYLGENVLLLDSAKAVAARVISLCLQLDEKNRNRNNSKD 241
Query: 247 DH---------ALFLSGKPDIAMRRLMQGFGLK 270
+ AL+ S + ++ + G
Sbjct: 242 EVSGSESKEMIALYTSEEISDGLKNTLAKIGFS 274
>gi|20807679|ref|NP_622850.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4]
gi|24418564|sp|Q8RAJ0|MURI3_THETN RecName: Full=Glutamate racemase 3
gi|20516226|gb|AAM24454.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4]
Length = 271
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 10/251 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+++ ++P+ +++Y D PYG+ +K + + L K
Sbjct: 10 PIGVFDSGVGGLTVLKRLMEVLPQENYVYFGDTRRVPYGDRSKEEIKAFTKQIMN-FLKK 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNT + + E + + F +K A T + I ++ T T
Sbjct: 69 KNVKIFVIACNTISAVFEKEGKE----IVFNVVEAGVKSAVETTCNKRIGVIGTRRTTEE 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
SN I ++ V+ L +E+ K + +K+ + C + ++ D
Sbjct: 125 RIYSNKIKEINKSIEVYEVACPELVPLIEKGF----YKTESVKRVVIECVKNLKEEKIDT 180
Query: 195 IVLACTHYPLIVHVFRQLS-PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP+++ + V +D ++ +A + + R+N +LS
Sbjct: 181 LVLGCTHYPIVIDYIEEALIGENVRIVDPAERLAYDVKEYITRVNMINPNGSGQVQFYLS 240
Query: 254 GKPDIAMRRLM 264
+
Sbjct: 241 KMTQSFIEIAK 251
>gi|28899710|ref|NP_799315.1| glutamate racemase [Vibrio parahaemolyticus RIMD 2210633]
gi|260361662|ref|ZP_05774689.1| glutamate racemase [Vibrio parahaemolyticus K5030]
gi|260879377|ref|ZP_05891732.1| glutamate racemase [Vibrio parahaemolyticus AN-5034]
gi|260897204|ref|ZP_05905700.1| glutamate racemase [Vibrio parahaemolyticus Peru-466]
gi|260901359|ref|ZP_05909754.1| glutamate racemase [Vibrio parahaemolyticus AQ4037]
gi|33301374|sp|Q87KP1|MURI_VIBPA RecName: Full=Glutamate racemase
gi|28807962|dbj|BAC61199.1| glutamate racemase [Vibrio parahaemolyticus RIMD 2210633]
gi|308089317|gb|EFO39012.1| glutamate racemase [Vibrio parahaemolyticus Peru-466]
gi|308092828|gb|EFO42523.1| glutamate racemase [Vibrio parahaemolyticus AN-5034]
gi|308108436|gb|EFO45976.1| glutamate racemase [Vibrio parahaemolyticus AQ4037]
gi|308111294|gb|EFO48834.1| glutamate racemase [Vibrio parahaemolyticus K5030]
Length = 270
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 133/260 (51%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+K + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKSILSPL-----CNKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI + +Q+ V +D+ ++IARR + LL + + +F
Sbjct: 179 DVAVLGCTHFPLIKNEIQQVLGSNVVLIDSGEAIARRVKALLS-CGELEEKEEGIKRIFA 237
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ + G
Sbjct: 238 SAPPWQEDALNICLAKLGFN 257
>gi|254428102|ref|ZP_05041809.1| glutamate racemase [Alcanivorax sp. DG881]
gi|196194271|gb|EDX89230.1| glutamate racemase [Alcanivorax sp. DG881]
Length = 263
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSGIGGL + +++R L+P + +YVAD + PYG +H +++R + +++
Sbjct: 5 GPIGIFDSGIGGLSIARRIRELLPNENLLYVADSIHAPYGEKSEHYIQQRSDAITRFLME 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA +LR+ + ++ +G P IK AA ++SG+I +L+T TL+
Sbjct: 65 -NEAKAIVVACNTATVSAIRQLRADY-TLPIIGVEPGIKPAALQSKSGVIGVLATSQTLK 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+NL + + + L ++E +++ + + + K D
Sbjct: 123 SESFNNLSRLFSENVRVEIQPCPGLVEQIEA----LELDSEATQTLVARYVQPLIQKGAD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
IVL CTHY + + R+ + V+ ++ ++AR L N + +
Sbjct: 179 HIVLGCTHYAFLAPLIRRAAGAHVEVVNTDMAVARETVRRLQMHNLLSDSPQAGSATFWS 238
Query: 253 SGKPDIAMRRLMQGFG 268
S +P +A R+L + +G
Sbjct: 239 SAEPSLAHRQLSELWG 254
>gi|260887883|ref|ZP_05899146.1| glutamate racemase [Selenomonas sputigena ATCC 35185]
gi|260862389|gb|EEX76889.1| glutamate racemase [Selenomonas sputigena ATCC 35185]
Length = 281
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 5/248 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GG+ VL+++ L+P+ FIY D PYG + ++
Sbjct: 27 KKEQPIGVFDSGLGGISVLRELVSLLPKEDFIYFGDAAHAPYGERTEREIRALTTAQIDR 86
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ V+ACNTA + LR + + +G PA+K A + + +++T A
Sbjct: 87 M-AAEGVKAVVLACNTATSAACAPLRRRYRQIPIIGMEPALKPAILSGEKPRVVVMATHA 145
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR+ + L+ + I + + VE +I+ + + +E F+ K
Sbjct: 146 TLRQKKFARLMERFKDAGEIVKLPCPEIVEFVERG----EIRSAALHEYLEERFLSVSQK 201
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+P + + + V D + AR + L + +
Sbjct: 202 PIDCVVLGCTHFPFVRDAIQDVVGQAVQIFDGAAGTARELKRRLLEADALRESGQKGAIE 261
Query: 251 FLSGKPDI 258
+LS D
Sbjct: 262 WLSSSSDP 269
>gi|328472462|gb|EGF43328.1| glutamate racemase [Vibrio parahaemolyticus 10329]
Length = 270
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 133/260 (51%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+K + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKSILSPL-----CNKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI + +Q+ V +D+ ++IARR + LL + + +F
Sbjct: 179 DVAVLGCTHFPLIKNEIQQVLGSNVVLIDSGEAIARRVKALLS-CGELEEKEEGIKRIFA 237
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ + G
Sbjct: 238 SAPPWQEDALNICLAKLGFN 257
>gi|327332416|gb|EGE74152.1| glutamate racemase [Propionibacterium acnes HL097PA1]
Length = 284
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYDVSVIDVIMPAARRASAATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VE+ E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ + D
Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMAESGLLHSHPRD 237
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|330838748|ref|YP_004413328.1| Glutamate racemase [Selenomonas sputigena ATCC 35185]
gi|329746512|gb|AEB99868.1| Glutamate racemase [Selenomonas sputigena ATCC 35185]
Length = 283
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 5/248 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GG+ VL+++ L+P+ FIY D PYG + ++
Sbjct: 29 KKEQPIGVFDSGLGGISVLRELVSLLPKEDFIYFGDAAHAPYGERTEREIRALTTAQIDR 88
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ V+ACNTA + LR + + +G PA+K A + + +++T A
Sbjct: 89 M-AAEGVKAVVLACNTATSAACAPLRRRYRQIPIIGMEPALKPAILSGEKPRVVVMATHA 147
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR+ + L+ + I + + VE +I+ + + +E F+ K
Sbjct: 148 TLRQKKFARLMERFKDAGEIVKLPCPEIVEFVERG----EIRSAALHEYLEERFLSVSQK 203
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+P + + + V D + AR + L + +
Sbjct: 204 PIDCVVLGCTHFPFVRDAIQDVVGQAVQIFDGAAGTARELKRRLLEADALRESGQKGAIE 263
Query: 251 FLSGKPDI 258
+LS D
Sbjct: 264 WLSSSSDP 271
>gi|237737770|ref|ZP_04568251.1| glutamate racemase [Fusobacterium mortiferum ATCC 9817]
gi|229419650|gb|EEO34697.1| glutamate racemase [Fusobacterium mortiferum ATCC 9817]
Length = 262
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 11/260 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ SI +FDSG+GG VL+++ ++P + Y D PYG +++ + +
Sbjct: 5 KQSIGVFDSGVGGTTVLKEILSILPNENIFYYGDSKNSPYGQKSAEEIRELCYKILDFFI 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ V+ACNTA D L++ + S+ +G + A +K+A + + I+IL+TP T
Sbjct: 65 A-NECKAVVVACNTATAAALDSLKNRY-SIPIIGVIDAGVKRALKVSSNNKINILATPFT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + +E K + + +K I+ K+
Sbjct: 123 VSSKAYITKFNKISKNISVTQEGCPEFCTMIETGWETHKDRYELLKNHIDNL-----SKK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-L 250
D ++L CTHYP+I + +D + A LL ++ T
Sbjct: 178 ADTLILGCTHYPIIREDIEKYFSG--KIVDPARETALELYSLLKLSDSLNTSDKKGRVDF 235
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F+SG + + + G +
Sbjct: 236 FVSGNKERFKKIAEKFLGFE 255
>gi|260553350|ref|ZP_05825964.1| glutamate racemase [Acinetobacter sp. RUH2624]
gi|260405187|gb|EEW98685.1| glutamate racemase [Acinetobacter sp. RUH2624]
Length = 266
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 6/249 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNKNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSRYVPYGDRESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + + V+ACNT + + +R+ ++ + PA+K A A T S I++L+T
Sbjct: 61 SNLVAQGKCKAIVVACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAMTVSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E E+K ++
Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235
Query: 248 HALFLSGKP 256
H ++ S P
Sbjct: 236 HIIWTSSDP 244
>gi|229497077|ref|ZP_04390781.1| glutamate racemase [Porphyromonas endodontalis ATCC 35406]
gi|229316002|gb|EEN81931.1| glutamate racemase [Porphyromonas endodontalis ATCC 35406]
Length = 277
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 12/260 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL +L+++R LMP+Y ++Y+ D+ PYG+ + K + + +
Sbjct: 6 APIGIFDSGYGGLTILREIRKLMPQYDYLYLGDNARSPYGSRSFEIVYKFTLQAVERLFE 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRST------FPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
P L ++ACNTA ++ PS LG + P ++ T S + IL
Sbjct: 66 MGCP-LVILACNTASAKALRTIQQQDLPQMSDPSRRVLGIIRPTVEAVDTITASKHVGIL 124
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ I + + + VE + ++K ++
Sbjct: 125 ATEGTVSSHSYQMEIAKLFPHIIVSEEACPMWVPLVENGEADSPGADYYVRKHLDALLC- 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-- 244
+ K D IVLACTHYPL+ ++L + + + +A + L R R+
Sbjct: 184 -KDKAIDTIVLACTHYPLLRQKIKRLITPSITVVSQGEYVASSLQDYLGRQTEMDARLSK 242
Query: 245 FDDHALFLSGKPDIAMRRLM 264
+ + D +
Sbjct: 243 SGSIRYLTTEQADKFAEKAS 262
>gi|83716465|ref|YP_440215.1| glutamate racemase [Burkholderia thailandensis E264]
gi|167616909|ref|ZP_02385540.1| glutamate racemase [Burkholderia thailandensis Bt4]
gi|257140841|ref|ZP_05589103.1| glutamate racemase [Burkholderia thailandensis E264]
gi|83650290|gb|ABC34354.1| glutamate racemase [Burkholderia thailandensis E264]
Length = 288
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 8/262 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + +
Sbjct: 11 SPARSPIGIFDSGLGGLSVLRAVRERLPDEAIVYVADSRHAPYGPRDDAFIIERTLAIGE 70
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ + L V+ACNTA +R P + +G P IK AA ++++ + +L+T
Sbjct: 71 WLVAQGAKAL-VVACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQ 128
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
ATLR LI + + C + L +E G E++ ++ G
Sbjct: 129 ATLRSARFEALIARHAADCRFICQAGHGLVEAIERGDTG----SPELRAQLAGFLEPMLE 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDD 247
D +VL CTHYP + R ++ + +D SD+IAR+ +L +
Sbjct: 185 AGADTLVLGCTHYPFLDAAIRDVTSSRLHLIDTSDAIARQLARILDERGLRAPASSRPAP 244
Query: 248 HALFLSGKPDIAMRRLMQGFGL 269
L +G GL
Sbjct: 245 PRLCSTGDGRHLQTLAATLLGL 266
>gi|260592030|ref|ZP_05857488.1| glutamate racemase [Prevotella veroralis F0319]
gi|260536314|gb|EEX18931.1| glutamate racemase [Prevotella veroralis F0319]
Length = 279
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + + +
Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVMKLFE 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ CNTA ++ P LG + P + T+S + +L+
Sbjct: 69 SG-CQLVILGCNTASAKALRSIQQNDLPKLDPQRRVLGVIRPTAEVIGKLTRSHHVGLLA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + I + V+ + +E + +KK I+ I +
Sbjct: 128 TEGTVKSQSYNIEIQKLWPDVKVTGVACPLWVPIIENNEADSPGADYFVKKRIDH--IMR 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
D ++L CTHYP+++ + P V + + +A + L R + R
Sbjct: 186 IDPEIDTLILGCTHYPILMPKIIKYVPRGVRIVPQGEYVAESLQDYLRRHPDMEQRCTKH 245
Query: 246 DDHALFLSGKPDIAMR 261
+ P+
Sbjct: 246 ATVRYLTTENPEKFKE 261
>gi|68535566|ref|YP_250271.1| glutamate racemase [Corynebacterium jeikeium K411]
gi|68263165|emb|CAI36653.1| murI [Corynebacterium jeikeium K411]
Length = 288
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 112/267 (41%), Gaps = 9/267 (3%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N + I +FDSG+GGL V + + +P + +Y+ D PYG+ +++
Sbjct: 14 NVQAVQANNAPIGVFDSGVGGLTVARAIVDQLPHENLVYIGDTANSPYGDKPLAQVRELS 73
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + + ++ + V+ACN+A + + R + +PA+++AAA T++G I
Sbjct: 74 IRIADTLAERG-CKMIVVACNSASSAFIRDARERYSIPVVEVILPAVRRAAAATRNGRIG 132
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
++ T AT+ +L + + + VE + ++ E
Sbjct: 133 VIGTQATVNSMSYQDLFAAI-PGVEAYAQACPQFVPFVERGMTSGR----QLMGLAENYL 187
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + D +VL CTHYPL+ V + + V +++++ A+ L +
Sbjct: 188 APLKAQGVDTVVLGCTHYPLLTGVVQLVMGEDVTLINSAEETAKTVYRTLAEQDLLADED 247
Query: 245 FD---DHALFLSGKPDIAMRRLMQGFG 268
+ + + +G P + + G
Sbjct: 248 SERTVNLSFESTGDPQRFAKLAGRFLG 274
>gi|56964421|ref|YP_176152.1| glutamate racemase [Bacillus clausii KSM-K16]
gi|81600804|sp|Q5WEL9|MURI_BACSK RecName: Full=Glutamate racemase
gi|56910664|dbj|BAD65191.1| glutamate racemase [Bacillus clausii KSM-K16]
Length = 276
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 101/248 (40%), Gaps = 9/248 (3%)
Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85
L V ++ +P+ +Y+ D PYG ++ + +L + + VIACN
Sbjct: 15 LTVASEIMRQLPKEPIVYIGDSARCPYGPRPVEEVRAFTWQMIGRLLHE-DVKMIVIACN 73
Query: 86 TAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144
TA ++ +E R+ + +G + P A +++ ++++ T T+ + +HS
Sbjct: 74 TATAVVLEEARAQL-DIPVVGVIRPGAISAIQVSENRHVAVIGTIGTIASNAYTMALHSI 132
Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204
+ ++ + VE+ IK E + + +G D ++L CTHYPL
Sbjct: 133 DENVTVESLACPLFVPLVEQG----TIKGPEAEAVVRESLAPLQGAGFDTLILGCTHYPL 188
Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRL 263
+ V P V + + + AR LL + ++ H + +G+ + +
Sbjct: 189 LKPVIEACLPS-VTVISSGEETAREVSSLLFYHSMNEQHQAKATHRFYTTGEANQFKQLA 247
Query: 264 MQGFGLKS 271
+ +
Sbjct: 248 ASWLNIHT 255
>gi|302876669|ref|YP_003845302.1| glutamate racemase [Clostridium cellulovorans 743B]
gi|307687344|ref|ZP_07629790.1| glutamate racemase [Clostridium cellulovorans 743B]
gi|302579526|gb|ADL53538.1| glutamate racemase [Clostridium cellulovorans 743B]
Length = 259
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 6/235 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V+++ +P+ + I+ D PYG D +KK L F + L
Sbjct: 6 KPIGFMDSGVGGLSVMKEAIKALPQENLIHFGDSKNAPYGIKTDEEIKK-LTFSAVEFLI 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K Q VIACNTA ++ ++LR + + +G PA+K A + G I +++TP TL+
Sbjct: 65 KKQCKAIVIACNTATSVAINDLREIYKEVPIIGIEPAVKPAVELNEDGKIIVMATPVTLK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ ++L+ Y S I + L +E ++ +E+ + F +
Sbjct: 125 KEKFNHLLEMYGSDREIIFLPCPELVELIERGV----LEGEELDNYLLSKFKPYLNDKIS 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+VL CTHYP +++ +D S ++ + +L R +
Sbjct: 181 AVVLGCTHYPFAKKAIKKIVG-DAKIIDGSYGTVKQLKNILMRRDELNDSNSKGT 234
>gi|326336585|ref|ZP_08202754.1| glutamate racemase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691250|gb|EGD33220.1| glutamate racemase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 259
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 8/251 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FDSG+GG + + + L+P +++AD + PYG + +
Sbjct: 1 MNTPIGLFDSGVGGTTIWRTLVRLLPYEDTLFLADSIHAPYGEKTSEEIIALCEKNTEYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + L ++ACNTA T LR+ + + F+G PAIK A Y+Q+ I +L+T +T
Sbjct: 61 LE-HNSKLIIVACNTATTNAISHLRAKYK-VPFIGIEPAIKPAGLYSQTKTIGVLATQST 118
Query: 132 LRRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
LR + + + H+ + L +EE +I E+ + +E +
Sbjct: 119 LRSAFFARTCQQLFDKGIHVIKQEGVGLVPLIEEG----RINTPEMIELLEKYLQPMIEQ 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
D +VL CTHYP + + ++ P V +D+++++A++ + +L + + + H
Sbjct: 175 NMDYLVLGCTHYPYLTSLISEILPEKVRIMDSAEAVAKQTQRILSQNQLLTENKATPSHL 234
Query: 250 LFLSGKPDIAM 260
+ +I
Sbjct: 235 WLTNKNVEILQ 245
>gi|304384311|ref|ZP_07366722.1| glutamate racemase [Prevotella marshii DSM 16973]
gi|304334627|gb|EFM00909.1| glutamate racemase [Prevotella marshii DSM 16973]
Length = 278
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSG GGL +L ++R +P Y +IY+ D+ PYG+ + + +
Sbjct: 8 GAIGVFDSGYGGLTILHEIRQQLPMYDYIYIGDNARAPYGSRSFDVVYEFTRQAVMKLFA 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ L ++ACNTA ++ +PS LG + P + T + + I++
Sbjct: 68 QG-CRLVILACNTASAKALRTIQQHDLPTTYPSRRVLGVIRPTAEVIGDITTTRHVGIVA 126
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP T++ I + + + A+ VE K + +KK ++ +
Sbjct: 127 TPGTIKSRSYEMEIGKLYPDIIVTGQACPLWAAIVEANEADSKGADYFVKKRLDE--LMS 184
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ D ++L CTHYPL++ R+ P V + +AR L R +R
Sbjct: 185 KDPHIDSLILGCTHYPLLLSKIRKHLPASVHIIPQGCYVARSLDDYLHRHPEIASRCTQG 244
Query: 246 DDHALFLSGKPDIAMR 261
+ P+
Sbjct: 245 GTCRYLTTESPERFQE 260
>gi|183602360|ref|ZP_02963726.1| glutamate racemase [Bifidobacterium animalis subsp. lactis HN019]
gi|219683325|ref|YP_002469708.1| glutamate racemase [Bifidobacterium animalis subsp. lactis AD011]
gi|241191286|ref|YP_002968680.1| glutamate racemase [Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196692|ref|YP_002970247.1| glutamate racemase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|254766107|sp|B8DT03|MURI_BIFA0 RecName: Full=Glutamate racemase
gi|183218279|gb|EDT88924.1| glutamate racemase [Bifidobacterium animalis subsp. lactis HN019]
gi|219620975|gb|ACL29132.1| glutamate racemase [Bifidobacterium animalis subsp. lactis AD011]
gi|240249678|gb|ACS46618.1| glutamate racemase [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240251246|gb|ACS48185.1| glutamate racemase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|289177402|gb|ADC84648.1| Glutamate racemase [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794279|gb|ADG33814.1| glutamate racemase [Bifidobacterium animalis subsp. lactis V9]
Length = 258
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG+GG+ V++++R +P +Y D PYG ++ + D +
Sbjct: 4 SAPVGVFDSGLGGISVVRQIRTDLPHERILYFGDSANAPYGTKTPEQVRDLSFRIVEDFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL--ISILSTPA 130
++ VIACNTA + ELR + + +G PA+K A + + +TP
Sbjct: 64 EQGA-KAVVIACNTATSSAVQELREHY-DIPIIGMEPALKVACDRGHGERQSVIVAATPL 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+H + IH L VE D + + + F + +
Sbjct: 122 TLRERKFAALMHRFEDAHTIHKQPCPRLVEIVERGELD---DHDLVMRTLHDYFDQYDLA 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
TD +VL CTH+ FR+L P V +D ++ AR +L + D +
Sbjct: 179 HTDSVVLGCTHFVFYRDYFRELLPNNVAIVDGNEGTARHLEVVLESLGKLAPEEQDGGVI 238
Query: 251 FLSGKPDIAMRRLMQGF 267
+ P + L Q
Sbjct: 239 LRNSDPGERIAELAQQL 255
>gi|225017223|ref|ZP_03706415.1| hypothetical protein CLOSTMETH_01149 [Clostridium methylpentosum
DSM 5476]
gi|224949998|gb|EEG31207.1| hypothetical protein CLOSTMETH_01149 [Clostridium methylpentosum
DSM 5476]
Length = 268
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 4/257 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++I IFDSG+GGL V+++++ ++P + +Y D PYG + S L
Sbjct: 3 NSAIGIFDSGVGGLTVVKELKRILPHENLVYFGDTGRVPYGTRSRQTIIDYAKQDLS-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ +++ AC T ++ +E+ P +PA++ A + T SG I +L T AT+
Sbjct: 62 KSKEIKMAIAACGTVSAVLPNEIIDELPFPYTGVLLPAVQTACSKTISGHIGVLGTSATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R I + + I + + VE ++ + + + G
Sbjct: 122 RSGAYGKAIRTILPNARITGIPCPLFVPLVENGY--VQRDNQVTRLVAQDYLKQVLGSDI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D ++L CTH+PL+ + + V +D AR A +L T+ ++ F
Sbjct: 180 DTLILGCTHFPLLKAIIGDIVGPDVRLIDPGRETARFAASVLTSEGLLNTQEERGSYSFF 239
Query: 252 LSGKPDIAMRRLMQGFG 268
+S P+ G
Sbjct: 240 VSDSPESFTESANLFLG 256
>gi|302346059|ref|YP_003814412.1| glutamate racemase [Prevotella melaninogenica ATCC 25845]
gi|302149137|gb|ADK95399.1| glutamate racemase [Prevotella melaninogenica ATCC 25845]
Length = 279
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 11/260 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + +
Sbjct: 5 SKQPGPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVM 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123
+ D L ++ CNTA ++ P LG + P + T+S +
Sbjct: 65 KLFD-LGCQLVILGCNTASAKALRTIQQNDLPNLDPDRRVLGVIRPTAEVIGKLTRSRHV 123
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T++ + I + V + +E + +KK I+
Sbjct: 124 GVLATEGTIKSDSYNLEIQKLWEDVKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH- 182
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
I + D ++L CTHYP+++ + P V + + +A + R R
Sbjct: 183 -IMRLDPEIDTLILGCTHYPILMPKILKHVPRGVRIVPQGEYVAESLQDYFRRHPDMDAR 241
Query: 244 VFDD--HALFLSGKPDIAMR 261
+ + + P+
Sbjct: 242 CTKNATVKYYTTENPEKFKE 261
>gi|332519960|ref|ZP_08396424.1| glutamate racemase [Lacinutrix algicola 5H-3-7-4]
gi|332044519|gb|EGI80713.1| glutamate racemase [Lacinutrix algicola 5H-3-7-4]
Length = 260
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 7/253 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+NSI IFDSG+GG + +++ L+P IY+AD PYG+ + + + ++
Sbjct: 3 KNSIGIFDSGVGGTSIFKEIHALLPNESTIYLADSKYAPYGSKTKNEIIDLSIKNTEFLI 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D + VIACNTA T D LR+T+ + F+G PAIK AA TQ+ I IL+T TL
Sbjct: 63 D-NNCKIIVIACNTATTNAIDILRNTYK-IPFIGIEPAIKPAALQTQTKAIGILATKGTL 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y + + + +E E +KK ++ E
Sbjct: 121 SSALFHKTTDLYTNGIKVIEQVGEGIVQLIENGDLHTPKMEFLLKKYLQPMLAE----NI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTHYP ++ + L P V +D+ ++A++ + +L + N + ++ +
Sbjct: 177 DYLVLGCTHYPYLMPILLNLLPKHVKIIDSGLAVAKQTKSVLEQYNLLNSIGKKPNNDFY 236
Query: 252 LSGKPDIAMRRLM 264
++ K M+ L+
Sbjct: 237 INIKNTAVMQSLL 249
>gi|291562561|emb|CBL41377.1| glutamate racemase [butyrate-producing bacterium SS3/4]
Length = 275
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 20/270 (7%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M DN P I + DSG+GG+ VL+++ LMP F+Y D PYG +
Sbjct: 18 MNTDNRP--------IGVLDSGLGGISVLRELVKLMPGEAFLYYGDSANAPYGTRTPEEV 69
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYT 118
+L++ V+ACNTA ++ ELR + + +G PA+K A
Sbjct: 70 IDLTKKDVDFLLERGA-KAIVVACNTATSVAIRELREEYEKKDIPVIGIEPALKPAVLAK 128
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+ + +++TP TL +T ++++H Y + +I + L +E G ++ + +
Sbjct: 129 EHSKVVVMATPMTLSQTKFNSMLHVYEDEANIIKMPCPGLVEYIE----GGMLEGPVLDE 184
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+E F E D +VL CTHYPL+ ++ P V D A++ R L
Sbjct: 185 YLEKQFEPYEKSEIDAVVLGCTHYPLVKDEIQKHLP-GVAIYDGGFGTAKQTRKRLTECG 243
Query: 239 THQTRVF-DDHALFLSGKPD---IAMRRLM 264
+ + +F S + RRL+
Sbjct: 244 LLSGKESGGEVKIFNSKNTEDVLELSRRLL 273
>gi|184156710|ref|YP_001845049.1| glutamate racemase [Acinetobacter baumannii ACICU]
gi|332873119|ref|ZP_08441076.1| glutamate racemase [Acinetobacter baumannii 6014059]
gi|183208304|gb|ACC55702.1| Glutamate racemase [Acinetobacter baumannii ACICU]
gi|322506599|gb|ADX02053.1| murI [Acinetobacter baumannii 1656-2]
gi|323516476|gb|ADX90857.1| glutamate racemase [Acinetobacter baumannii TCDC-AB0715]
gi|332738631|gb|EGJ69501.1| glutamate racemase [Acinetobacter baumannii 6014059]
Length = 288
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 7 PCEKKL-QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K L I IFDSGIGG+ V ++ +P +Y AD PYG D +++
Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124
D L + ++V+ACNTA D LR + +G VPA+K A T+S +++
Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+TPAT R +++ + + + ++S+ L VE + +++ ++
Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPACLNALREVLQ- 190
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYP + L +D+ ++AR+ +L +
Sbjct: 191 ---PAVEQGADYLVLGCTHYPFLNEAIHYLFDNQFTLVDSGLAVARQTARILIKNELLCD 247
Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265
++ + A ++SG A++ ++Q
Sbjct: 248 QMRQNVARIECYVSGNNADALQPVLQ 273
>gi|218782867|ref|YP_002434185.1| glutamate racemase [Desulfatibacillum alkenivorans AK-01]
gi|218764251|gb|ACL06717.1| glutamate racemase [Desulfatibacillum alkenivorans AK-01]
Length = 264
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 5/220 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL V + + L P + Y D PYG + + + +LD+
Sbjct: 2 IGIFDSGIGGLTVARAVMELFPHLNICYFGDTARTPYGTKSKDTVTRYAVENTRFLLDQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA + LR F F PA+ A + ++ I ++ T T+
Sbjct: 62 A-KIIVVACNTASAVAVPTLRERFDVPIFEVISPAVDMALSLAKAKRIGVIGTRGTINSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI + + +L S VEE +K+ E + ++ + ++ +
Sbjct: 121 IYERLIKERDPERKVFSEPCPLLVSLVEEGW----LKKPETRMIVKKYLHPLKAQQIQSL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
+L CTHYP+I + + V +D+S++++ + L
Sbjct: 177 ILGCTHYPIIKQLIARKIGKRVKIVDSSEAVSVSLKRYLD 216
>gi|226941421|ref|YP_002796495.1| glutamate racemase [Laribacter hongkongensis HLHK9]
gi|226716348|gb|ACO75486.1| MurI [Laribacter hongkongensis HLHK9]
Length = 272
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSGIGGL V++ + +P +Y D PYG ++ + +L
Sbjct: 6 RRPIGVFDSGIGGLTVVRALMDRLPFEDILYFGDSARVPYGTKSVATIQHYTREIAEFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAA-AYTQSGLISILSTP 129
+ +IACNT + D +RS + L + A QAA A ++SG I +++TP
Sbjct: 66 AR-DVKALIIACNTMAAVAADVVRSVAEPLGVPVLDVIDAGSQAAVAASRSGEIGVIATP 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + IH Q ++ + + VEE + ++ ++ +E
Sbjct: 125 TTINANAYARAIHVMNPQARLYSQACPLFVPLVEEGWLDHPVTRLTAEEYLKTVLVE--- 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-H 248
D +VL CTHYPL+ + ++ V +D++ + A+ L R+ + +
Sbjct: 182 -EVDTLVLGCTHYPLLKPLLADVAGPGVQLVDSAVTTAQATAATLERLGLLNPPAAETYY 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
F++ P + G
Sbjct: 241 RYFVTDIPLKFQTIGERFLG 260
>gi|169797366|ref|YP_001715159.1| glutamate racemase [Acinetobacter baumannii AYE]
gi|213155819|ref|YP_002317864.1| glutamate racemase [Acinetobacter baumannii AB0057]
gi|215484806|ref|YP_002327041.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|301345461|ref|ZP_07226202.1| glutamate racemase [Acinetobacter baumannii AB056]
gi|301511091|ref|ZP_07236328.1| glutamate racemase [Acinetobacter baumannii AB058]
gi|332851876|ref|ZP_08433779.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332867934|ref|ZP_08437922.1| glutamate racemase [Acinetobacter baumannii 6013113]
gi|169150293|emb|CAM88190.1| glutamate racemase [Acinetobacter baumannii AYE]
gi|213054979|gb|ACJ39881.1| glutamate racemase [Acinetobacter baumannii AB0057]
gi|213987180|gb|ACJ57479.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|332729661|gb|EGJ60997.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332733635|gb|EGJ64794.1| glutamate racemase [Acinetobacter baumannii 6013113]
Length = 288
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 7 PCEKKL-QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K L I IFDSGIGG+ V ++ +P +Y AD PYG D +++
Sbjct: 13 PMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124
D L + ++V+ACNTA D LR + +G VPA+K A T+S +++
Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+TPAT R +++ + + + ++S+ L VE + + +++ ++
Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ- 190
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYP + L +D+ ++AR+ +L +
Sbjct: 191 ---PAVEQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCD 247
Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265
++ + A ++SG ++ ++Q
Sbjct: 248 QIRQNVARIECYVSGNNADVLQPVLQ 273
>gi|288801916|ref|ZP_06407358.1| glutamate racemase [Prevotella melaninogenica D18]
gi|288335958|gb|EFC74391.1| glutamate racemase [Prevotella melaninogenica D18]
Length = 279
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 11/260 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + +
Sbjct: 5 SKQPGPIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVM 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123
+ + L ++ CNTA ++ P LG + P + T S +
Sbjct: 65 KLFE-LGCQLVILGCNTASAKALRTIQQNDLPNLDPDRRVLGVIRPTAEVIGKLTHSRHV 123
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T++ + I + V + +E + +KK I+
Sbjct: 124 GVLATEGTIKSDSYNLEIQKLWGDVKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH- 182
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
I + D ++L CTHYP+++ + P V + + +A + R R
Sbjct: 183 -IMRLDPEIDTLILGCTHYPILMPKILKHVPRGVRIVPQGEYVAESLQDYFRRHPDMDAR 241
Query: 244 VFDD--HALFLSGKPDIAMR 261
+ + + P+
Sbjct: 242 CTKNATVKYYTTENPEKFKE 261
>gi|294634282|ref|ZP_06712824.1| glutamate racemase [Edwardsiella tarda ATCC 23685]
gi|291092322|gb|EFE24883.1| glutamate racemase [Edwardsiella tarda ATCC 23685]
Length = 260
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 125/236 (52%), Gaps = 3/236 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V Q+++ L+P+ H+IY D+ GFPYG E + +R++ + I ++
Sbjct: 2 LVFDSGVGGLSVYQEIQALLPDLHYIYAFDNQGFPYGEKEAAFITERVLLIVEAIQRRHT 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA T++ LR F S +G VPAIK AA T++G++ +L+T AT++R Y
Sbjct: 62 LSAMVVACNTASTIVLPALRERF-SFPVVGVVPAIKPAAKLTRNGIVGLLATRATVQRAY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T L+ + + C I ++ S L E G ++ ++ + E D +V
Sbjct: 121 THELVARFAADCQIKMLGSAELVEIAEAKLHGEAVELQRLRAILRPWLTMAEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
L CTH+PL+ Q+ P +D+ +IARR L+ T + A
Sbjct: 179 LGCTHFPLLRAELAQVLPVGTRMVDSGAAIARRVAWLIANQPTLTGTDRRNVAYAT 234
>gi|193078720|gb|ABO13787.2| Glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 266
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKYIRQALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + VIACNT + + +R+ ++ + PA+K A A T S I++L+T
Sbjct: 61 SNLVTHGKCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAMTLSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E E+K ++
Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + +++ + ++ S+++ A+ R L + ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235
Query: 248 HALFLSGKP 256
H ++ S P
Sbjct: 236 HIIWTSSDP 244
>gi|189464295|ref|ZP_03013080.1| hypothetical protein BACINT_00636 [Bacteroides intestinalis DSM
17393]
gi|189438085|gb|EDV07070.1| hypothetical protein BACINT_00636 [Bacteroides intestinalis DSM
17393]
Length = 279
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 107/260 (41%), Gaps = 11/260 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + +
Sbjct: 6 PTIPGPIGVFDSGYGGLTILSKIREALPQYDYIYLGDNARTPYGTRSFEIVYEFTLQAVT 65
Query: 70 DILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123
+ + L ++ACNTA +L P+ LG + P ++ + TQS +
Sbjct: 66 KLFE-MGCHLVILACNTASAKALRSIQINDLPGMDPARRVLGVIRPTVECIGSITQSRHV 124
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T++ IH + + + S VE + ++K I
Sbjct: 125 GVLATAGTIKSESYPLEIHKLFPDIQVAGEACPLWVSLVENNEAEGDGTDYFVRKYINEL 184
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ + D ++L CTHYPL++ ++ P + + + +A + R +
Sbjct: 185 LA--KDAQIDTVILGCTHYPLLLPKIKKHMPDGITTVAQGELVADSLKDYFHRHPEMDAK 242
Query: 244 --VFDDHALFLSGKPDIAMR 261
+ + + + +
Sbjct: 243 CTKGGNCTYYTTEAEEKFIE 262
>gi|269216891|ref|ZP_06160745.1| glutamate racemase [Slackia exigua ATCC 700122]
gi|269129698|gb|EEZ60782.1| glutamate racemase [Slackia exigua ATCC 700122]
Length = 430
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 17/258 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL V +++ LMP +Y D PYG + H + + + + +
Sbjct: 146 NAPIGVFDSGYGGLTVAREIAALMPHESIVYFGDTARCPYGPRDPHEVAEFVQQIGRWLT 205
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPAT 131
+ + VIACNTA + + TF S+ G P + AA T +G + ++ T T
Sbjct: 206 AR-NVKMLVIACNTATAAGLERAQQTF-SVPVRGAVEPGARAAARATHNGRVGVIGTKGT 263
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI-----KKEIEG---- 182
+ I + + + +++ VE K +++ K I
Sbjct: 264 IESDCYPRAIRAIDAGLTVFSIATPRFVEIVENGIRLSKGPIEDLTSMASKAYIRPSFQA 323
Query: 183 ----CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRI 237
D +VLACTHYPL+ + + V + +S+++A R L R
Sbjct: 324 IAREYLEPLRRCHVDALVLACTHYPLLKALIGGVMGHKVLLVSSSEALAHDVRATLTARR 383
Query: 238 NTHQTRVFDDHALFLSGK 255
T + + + +
Sbjct: 384 QTASPDAVPVYEFYTTSE 401
>gi|293607195|ref|ZP_06689536.1| glutamate racemase [Achromobacter piechaudii ATCC 43553]
gi|292814287|gb|EFF73427.1| glutamate racemase [Achromobacter piechaudii ATCC 43553]
Length = 279
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I ++DSG+GGL VL+ +R + + +YVAD PYG +++R + + +
Sbjct: 8 SPIGVYDSGVGGLSVLRAIRDALSDESLLYVADSAHVPYGEKSQDFVEQRALTVADYFVS 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ + V+ACNTA ++R P + +G PAIK AA T SG++ + +T TL
Sbjct: 68 RHAKAM-VVACNTATAAAIAQVRRRHPGLIVIGVEPAIKPAAHLTHSGVVGVFATTGTLA 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ + I L VE+ ++ + + G + D
Sbjct: 127 SPKFAALVQREAPEVRILLHPCPQWVRLVEQG----ELSGPAVDAAVAGPVAQLRAAGAD 182
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFDDHA 249
V+VL CTH+P + + + V L+ +AR R L R D HA
Sbjct: 183 VLVLGCTHFPFLRDAIQAAAGPGVPLLETGAPVARWLRHQLQERALLCTDSARTADTHA 241
>gi|124266488|ref|YP_001020492.1| glutamate racemase [Methylibium petroleiphilum PM1]
gi|124259263|gb|ABM94257.1| glutamate racemase [Methylibium petroleiphilum PM1]
Length = 276
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 7/272 (2%)
Query: 1 MKIDNYPCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
M P + + + I +FDSG+GGL VL+ + +P +YVAD PYG ++
Sbjct: 1 MTNTAAPLDDRPSAACIGVFDSGVGGLSVLRALHRHLPHSRLLYVADSGFAPYGERDEGY 60
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
+ +R L + +L + L V+ACNTA LR + F+G P IK A A ++
Sbjct: 61 VVERSRVLTTHLL-REGAQLIVVACNTATAAAVRALREEHADVQFVGVEPGIKPAIALSR 119
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SG I +++T TL L+ S+ +HL + LA +E E+
Sbjct: 120 SGRIGVMATRGTLASDKFRRLVSSHAQGAQLHLQACAGLAHAIEAGDAN----SAEVLAL 175
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
++ D +VL CTHYP + ++ V +D +D++ARR + L+ + +
Sbjct: 176 VDRYTAPLREAAVDTVVLGCTHYPFVAQHIQRALGAGVQLVDTADAVARRVQQLIVGLRS 235
Query: 240 HQTR-VFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ L+ +G + +
Sbjct: 236 ADVQAAARPARLWTTGDLATLTLVAGRWLDFE 267
>gi|326800551|ref|YP_004318370.1| glutamate racemase [Sphingobacterium sp. 21]
gi|326551315|gb|ADZ79700.1| Glutamate racemase [Sphingobacterium sp. 21]
Length = 276
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 59/265 (22%), Positives = 103/265 (38%), Gaps = 11/265 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL V +++ +P+Y +IY D+ PYG + M + + D
Sbjct: 2 GPIGIFDSGYGGLTVFKEISHTLPQYDYIYFGDNARVPYGTRSYDTVYHYTMECVNHLFD 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA ++ LG + P + +T S + IL+
Sbjct: 62 -LGCHLVILACNTASAKALRTIQQKDLPKRTDLRNVLGVIRPTTEIIDRFTISNHVGILA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ IH + Q ++ + + VE +K+ I+ +
Sbjct: 121 TSGTVNSASYVLEIHKFFPQIKVYQEACPMWVPLVENNEMDSPGARYFVKQHIDRLL--Q 178
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245
+ D ++LACTHYPL++ ++ P V + +A+ L R +
Sbjct: 179 QSTEIDAVILACTHYPLLLPTIKEFMPKGVQVISQGSIVAKSLADYLYRHKEIEALCTKN 238
Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270
F + + + +GL
Sbjct: 239 GARQFFTTESVENFKEKASIFYGLP 263
>gi|160934063|ref|ZP_02081450.1| hypothetical protein CLOLEP_02926 [Clostridium leptum DSM 753]
gi|156866736|gb|EDO60108.1| hypothetical protein CLOLEP_02926 [Clostridium leptum DSM 753]
Length = 271
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 98/253 (38%), Gaps = 7/253 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL ++++R L+P +Y D PYGN + + + +L
Sbjct: 4 NHPIGVFDSGVGGLTAVKELRALLPHEDIVYFGDTSRAPYGNRSRDTILRYARQDVNFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + + AC T ++ + + P P + A T++ I +++T AT+
Sbjct: 64 SQK-VKMIIAACGTVSSVAAS-MGQSLPVPFTGVVTPTCRAAVKATKNKRIGVIATAATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE-GCFIEKEGKR 191
+++ + + + VE D++ + G
Sbjct: 122 DSGSYRKELNALHPEIQVFEQPCPLFVPLVENAFID---PGDQVTNLVAQRYLSGLRGAG 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYP+I + + V +D+ A A LL + +A
Sbjct: 179 VDTLILGCTHYPIISAIISKAMGDQVTLIDSGRETAVYAARLLKDQQLLASGGQEGRNAF 238
Query: 251 FLSGKPDIAMRRL 263
++S D +
Sbjct: 239 YVSDSVDGFNQIA 251
>gi|304317524|ref|YP_003852669.1| glutamate racemase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302779026|gb|ADL69585.1| glutamate racemase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 264
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 8/246 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL++++ L+P +IY D PYG ++K + + +
Sbjct: 4 RPIGVFDSGVGGLTVLKRLKELLPNEDYIYFGDTKRVPYGEKSKKEIEKYARQIVHFMNE 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K + VIACNT I ++ + + F + AA T++ + +++T T+
Sbjct: 64 K-NTKIIVIACNTTCASID---KNEYSEILFNVLEAGAESAAYLTKNKKVGVIATTRTIE 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VEE DE K + + D
Sbjct: 120 SRSYEKNIKLIDSGIDVFGKACPRFVPLVEEGLAN----SDEAFKCAKEYLSVLNNEEID 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP++++ + V +D + ++ + + L +R+ F+S
Sbjct: 176 TLVLGCTHYPILINAIKNAVHKDVIIVDPAIKLSEKVKSYLEENAMLNSRLTGKTEYFVS 235
Query: 254 GKPDIA 259
G +
Sbjct: 236 GNKENF 241
>gi|15806594|ref|NP_295309.1| glutamate racemase [Deinococcus radiodurans R1]
gi|6459350|gb|AAF11147.1|AE002002_5 glutamate racemase [Deinococcus radiodurans R1]
Length = 369
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 8/252 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL VL +++ +P+ +Y+AD PYG D ++ ++++ +
Sbjct: 98 PIGVFDSGAGGLSVLAELQRALPQEDVLYLADTAHVPYGARSDEDIRDLTARAVAELVRR 157
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA LR F + +G VPA+K A A T+SG++ +L+TP TLR
Sbjct: 158 G-VKAVVVACNTASAFSLTHLRERF-ELPIIGLVPAVKPAVAATKSGVVGVLATPGTLRG 215
Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
T +++I + + + S L VE E + +
Sbjct: 216 TLLADVIRQWAEPAGVRVMQAVSTELVPLVEAGKA----DSPEARVVLRDVLEPLAEAGA 271
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP + R +D+ ++AR R +L R + +L
Sbjct: 272 DQLVLGCTHYPFLAGSIRAEFGDTFALVDSGAAVARHTRNVLSRGGLLRGGDRTGEVSYL 331
Query: 253 SGKPDIAMRRLM 264
+ +R L+
Sbjct: 332 TTSDPAHLRALL 343
>gi|150389186|ref|YP_001319235.1| glutamate racemase [Alkaliphilus metalliredigens QYMF]
gi|149949048|gb|ABR47576.1| glutamate racemase [Alkaliphilus metalliredigens QYMF]
Length = 279
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 8/239 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E+ + I +FDSG+GG+ VL + +PE ++Y D PYG +KK +
Sbjct: 3 EEIRKLPIGVFDSGVGGISVLADLISQLPEESYVYYGDSGNAPYGIKSKDEVKKLSFDVV 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+L + V+ACNTA + DELR++ + +G PA+K A SG + +++T
Sbjct: 63 EFLLAQG-IKALVVACNTATSAAIDELRASL-DIPVIGMEPALKPALELHPSGRVIVMAT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKEIEGCFIEK 187
P TLR + LI + + + L +E E A G ++ +E F
Sbjct: 121 PVTLREKKFNTLIDRFNDCGEVIKLPCPGLVEIIEREGARG-----PALETYLEKLFSPF 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D IVL CTHY + ++ +D + A+ R LL N ++ D
Sbjct: 176 NMEEIDAIVLGCTHYVFVRESIAEMIGNHAALIDGNGGTAKHVRRLLQEENLLVSQFKD 234
>gi|229815852|ref|ZP_04446176.1| hypothetical protein COLINT_02906 [Collinsella intestinalis DSM
13280]
gi|229808547|gb|EEP44325.1| hypothetical protein COLINT_02906 [Collinsella intestinalis DSM
13280]
Length = 297
Score = 272 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 103/263 (39%), Gaps = 18/263 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + I +FDSG+GGL V + + +P YV D PYG + ++ ++
Sbjct: 6 MRDCERPIGVFDSGLGGLTVARCIATSLPHESIYYVGDTKRCPYGVRPEEEVRSFVLQ-A 64
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L +++ + VIACNTA + P + +G + P + A T++ + +L+
Sbjct: 65 GRWLAEHEVKIMVIACNTATAAGLRIAQQVLP-VPVIGVIAPGARAAINSTRTRKVGVLA 123
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC------------GIKIKEDE 175
TP T+R + I + ++ + VE G E
Sbjct: 124 TPLTVRTGAYTRAIQDLDAGVDVYGCPAPSFVEIVEHELATGAHLQERWLQNGDIFDTLE 183
Query: 176 IKKEIEGCFIEKE--GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ E+E G + D +VL CTH+PL+ R V + +++ R +
Sbjct: 184 NRVEVERTLAPIISGGAQVDTVVLGCTHFPLLAGPIRHALGPDVRVVSSAEETTRELEDI 243
Query: 234 LPRINTHQTRVF-DDHALFLSGK 255
L R + + +H +
Sbjct: 244 LSRRDLLAPQTAQPEHRFATTSD 266
>gi|225023363|ref|ZP_03712555.1| hypothetical protein EIKCOROL_00221 [Eikenella corrodens ATCC
23834]
gi|224943841|gb|EEG25050.1| hypothetical protein EIKCOROL_00221 [Eikenella corrodens ATCC
23834]
Length = 271
Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL V++ + +P + +Y D PYG ++ + + L
Sbjct: 8 QRPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRSTIETYTAQIV-EFL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPAT 131
++ VIACNT + ++R T M L + A QAA T ++G I I++T T
Sbjct: 67 MQHDVKALVIACNTIAAVAGAKVRQTAGGMPVLDVIAAGAQAALATSRNGRIGIIATSTT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH+ Q + + +L VEE ++ +++ ++ E
Sbjct: 127 VNSNAYARAIHAQNPQARVPSQACPLLVPLVEEGWLEHEVTRLTVREYLKPLLAE----D 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D +VL CTHYPL+ + + +P + +D++ + A L ++ D+
Sbjct: 183 IDTLVLGCTHYPLLKPLLQSEAP-HLALVDSALTTAEATAAALAEAGLLNPSQTPADYHF 241
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 242 YVSDIPLRFQTIGERFLG 259
>gi|84394314|ref|ZP_00993037.1| glutamate racemase [Vibrio splendidus 12B01]
gi|84375044|gb|EAP91968.1| glutamate racemase [Vibrio splendidus 12B01]
Length = 276
Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 137/262 (52%), Gaps = 11/262 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
LQ +IL+FDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ + +
Sbjct: 15 LQKNILVFDSGVGGLSVYKEISQLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSIVTSF 74
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + + VIACNTA T++ LR+ S+ +G VPAIK A+ + + +++TPAT
Sbjct: 75 VASHAIDIVVIACNTASTIVLPTLRAN-NSIPIVGVVPAIKPASLL-ANKAVGLIATPAT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI ++ S + L+ S L E+ G I +E+++ ++
Sbjct: 133 ITREYTHELIKNFSSNKRVELLGSTRLVDMAEDKLRGEAINLEELQQILQPMI-----NT 187
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV VL CTH+PLI +Q+ V +D+ +IA+R + LL R +F
Sbjct: 188 IDVAVLGCTHFPLIKSEIQQVLGKSVLLVDSGKAIAKRVQDLLDL--ESGNREGGVREVF 245
Query: 252 LSGKP--DIAMRRLMQGFGLKS 271
S P + A+ ++ G S
Sbjct: 246 CSALPKKESALNSTLKQLGFSS 267
>gi|149912317|ref|ZP_01900882.1| glutamate racemase [Moritella sp. PE36]
gi|149804604|gb|EDM64670.1| glutamate racemase [Moritella sp. PE36]
Length = 262
Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 3/257 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ ILIFDSG+GG+ + + ++ +P ++Y+ D+ FPYG + L R+ L + +
Sbjct: 2 SKILIFDSGVGGISIYKAIKEQLPNADYLYLFDNKYFPYGELDPEFLIDRVCQLIGYMCE 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L VIACN+A TL+ LR F S+ F+G VPAIK AA ++ I +L+TP T+
Sbjct: 62 NHSPDLVVIACNSASTLVLPALRKRF-SIPFVGVVPAIKPAALQSKKKKIGLLATPGTVS 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT L++ + C I ++ + L + E G + D I + + D
Sbjct: 121 REYTQLLVNEHAQDCEIDMIGTTSLVLQAENKLYGHPVDLDAINNVVSKWSDPQNS--PD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V+VL CTH+PL+V + ++D+ +IA R + +L NT +
Sbjct: 179 VVVLGCTHFPLLVTELEASLGEHIQFIDSGMAIALRVKDILGEKNTVLNTCNIGQSFCTK 238
Query: 254 GKPDIAMRRLMQGFGLK 270
+ + L GL
Sbjct: 239 IQAQKKLTLLFNRIGLS 255
>gi|323465948|gb|ADX69635.1| Glutamate racemase [Lactobacillus helveticus H10]
Length = 267
Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 15/267 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GG V++K+ +P +++ D PYG+ + +
Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVKKVIEKLPHESTVFIGDSANMPYGDKSREQIIE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L K L + ACNTA + L++ AA T++
Sbjct: 53 LTRRSVKFLLQKK-VKLIIFACNTATAVAMPTLQNEVEQQIIGVIQSGSLAAARTTKNKK 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+++ +TP T+ I + V++ LA +E D ++
Sbjct: 112 VAVAATPVTINSHAYQKEIKFRDPDIKVMEVAAPELAPLIESQK-----DYDTNLAAVKR 166
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ + D VL CTHYPLI + F + + +D +D +A+ ++ R +
Sbjct: 167 SIAPLKDQDFDTFVLGCTHYPLIQNEFAEALGDKIQIVDPADQVAQYTFNVMRRDGLFSS 226
Query: 243 -RVFDDHALFLSGKPDIAMRRLMQGFG 268
H + +G PD + G
Sbjct: 227 FDQAGKHEYYTTGDPDKFSEMERRFLG 253
>gi|320335009|ref|YP_004171720.1| glutamate racemase [Deinococcus maricopensis DSM 21211]
gi|319756298|gb|ADV68055.1| Glutamate racemase [Deinococcus maricopensis DSM 21211]
Length = 279
Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 10/254 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ I +FDSG+GGL VL +R +P ++Y+AD PYG D ++
Sbjct: 4 ADPHPHAPIGVFDSGVGGLSVLAALRRELPNEDYLYLADTAHVPYGPRADDDIRDLTGRA 63
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISIL 126
+ D + V+ACNTA LR+ +G VPA+K A A T+SG+I +L
Sbjct: 64 ARWLFD-HGAKSVVVACNTASAFSLAPLRAWAGDARPVVGLVPAVKPAVAATRSGVIGVL 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSS--MILASRVEEYACGIKIKEDEIKKEIEGCF 184
+TPATLR +++ + + + +V + L VE +++ ++
Sbjct: 123 ATPATLRGALLQDVVAQHATPRGVRVVPCADLRLVPLVESGLADAPETLAALRETLD--- 179
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--T 242
G D +VL CTHYP + R L + D+ +ARR R +L + T
Sbjct: 180 -PVVGAGADALVLGCTHYPFLTSALRHLYGPDLALFDSGAGVARRTRAVLAERGLLRAPT 238
Query: 243 RVFDDHALFLSGKP 256
F +G P
Sbjct: 239 GTPGTVRAFTTGDP 252
>gi|167626058|ref|YP_001676352.1| glutamate racemase [Shewanella halifaxensis HAW-EB4]
gi|189030370|sp|B0TMV5|MURI_SHEHH RecName: Full=Glutamate racemase
gi|167356080|gb|ABZ78693.1| glutamate racemase [Shewanella halifaxensis HAW-EB4]
Length = 266
Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 84/259 (32%), Positives = 135/259 (52%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I+IFDSGIGGL + +++ ++P+ + Y+ D+ PYG E+ L K + L +
Sbjct: 1 MSGPIVIFDSGIGGLSIFDEIKKVLPDQGYCYLFDNARLPYGELEESVLIKGCVDLICEQ 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + VL V+ACN+A TL+ LR+ S+ +G VPAIK AA +++ I +L+T T
Sbjct: 61 VKRIDAVLVVVACNSASTLVLPGLRARL-SIPIVGVVPAIKPAAQISKTRHIGLLATHGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT LI + C + L S L E G K+ D IK +E +
Sbjct: 120 IKRSYTRELIKEFAGDCKVDLFGSSELVMLAEAKLAGEKL--DLIK--LESQLKPIQHSD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HAL 250
D +VL CTH+P+I +Q+ V LD+ +IA+R LL I + A+
Sbjct: 176 LDTLVLGCTHFPIIADEIQQVLGAGVKLLDSGKAIAQRVSYLLENIEDKLDNSAGELMAI 235
Query: 251 FLSGK--PDIAMRRLMQGF 267
+ + + P +A R +GF
Sbjct: 236 YTTEEITPGLATRLAEKGF 254
>gi|332288965|ref|YP_004419817.1| glutamate racemase [Gallibacterium anatis UMN179]
gi|330431861|gb|AEC16920.1| glutamate racemase [Gallibacterium anatis UMN179]
Length = 262
Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 86/261 (32%), Positives = 135/261 (51%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+IL FDSG+GGL V ++++ L+P YH++Y D+ FPY L++R + + I
Sbjct: 4 NPTILFFDSGVGGLSVYREVKALLPNYHYLYCLDNACFPYSEKPGKLLEQRCVEICQKIA 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q L VIACNTA T++ +R+ F + +G VPAIK AA TQ+ +I +L+T T+
Sbjct: 64 TNQQIDLIVIACNTASTIVLPAMRAAF-NCPIVGTVPAIKPAAEKTQTKVIGLLATKGTI 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R Y +LI Y C + + S L E+ G KI I + + E E
Sbjct: 123 TRPYVDDLIQQYAKNCEVKRLGSTELVEIAEQKLHGKKIDHLAIMRAVAEWRYEYEM--- 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL-F 251
D +VL CTH+PL+ + P ++D+ +IARR + LL QT +D + +
Sbjct: 180 DTVVLGCTHFPLLKSELKACLPQVSFFIDSGKAIARRVQSLL----LSQTTTSNDKQIAY 235
Query: 252 LSGKPDIA--MRRLMQGFGLK 270
+ D A ++++ +G K
Sbjct: 236 CTAPFDDANDVKKMFCDWGFK 256
>gi|293610177|ref|ZP_06692478.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827409|gb|EFF85773.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 288
Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 12/266 (4%)
Query: 7 PCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K I IFDSGIGG+ V ++ +P +Y AD PYG D +++
Sbjct: 13 PMPKASADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124
D L + ++V+ACNTA D LR + +G VPA+K A T+S +++
Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+TPAT R +++ + + + ++S+ L VE + K ++
Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMG----EACLKALKE 187
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYP + L +D+ ++AR+ +L +
Sbjct: 188 VLQPAAEQGADYLVLGCTHYPFLNQAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCD 247
Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265
++ + A ++SG A++ ++Q
Sbjct: 248 QIGQNVARIECYVSGNNAEALQPVLQ 273
>gi|119899045|ref|YP_934258.1| glutamate racemase [Azoarcus sp. BH72]
gi|119671458|emb|CAL95371.1| glutamate racemase [Azoarcus sp. BH72]
Length = 271
Score = 272 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 107/263 (40%), Gaps = 7/263 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + SI +FDSGIGGL V++ + +P + IY D PYG +++ +
Sbjct: 3 ADARASRSIGVFDSGIGGLTVVRALMERLPFENIIYFGDTARVPYGVKSVATIEQFTAQI 62
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126
+L + + ++ACNT + + + + L + + A A + G I ++
Sbjct: 63 TDFLL-QQDVKMLIVACNTMAAVAAHIVAARAGGIPVLDVIEAGARAAVAASPGGRIGVI 121
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
TP T+ + IH + ++ + + VEE + ++ + E
Sbjct: 122 GTPTTVNSNAYARRIHELDAGARVYSQACPLFVPLVEEGWLDHPVTRMTAQEYLRPVLAE 181
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D +VL CTHYPL+ + R ++ V +D++ + A A L Q
Sbjct: 182 ----EVDSLVLGCTHYPLLKPLLRDVAGPGVKLIDSALTTAELAAERLNDCGLAQGGSAP 237
Query: 247 -DHALFLSGKPDIAMRRLMQGFG 268
++ +++ P + G
Sbjct: 238 ANYRYYVTDVPLRFQTIGERFLG 260
>gi|301062755|ref|ZP_07203367.1| glutamate racemase [delta proteobacterium NaphS2]
gi|300443162|gb|EFK07315.1| glutamate racemase [delta proteobacterium NaphS2]
Length = 272
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 13/249 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L +PEY ++Y+ D PYGN + + K
Sbjct: 2 IGVFDSGFGGLTILGAFLKSLPEYDYLYLGDSARTPYGNKSQEVIYNYTRQAVRFLFSKG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-----PSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
VL ++ACNTA T +++ + P+ LG +P + A A T+ G I ++ T
Sbjct: 62 -CVLIILACNTASTKALRKIQQEWLPENHPNRRVLGVVIPLAESAVASTRYGRIGVIGTQ 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ I I + +L VEE G +KK + +
Sbjct: 121 ATIDSRVYEEEIRKLNPGVKIFTQACPLLVPLVEEGWVGKPESNMILKKYLSR----LKR 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
K+ D ++L CTHY + ++ L+ + IA + + L R +TR+ D+
Sbjct: 177 KQIDTLILGCTHYSFLEKDIARIMGKNCRVLNGPEIIAAKLKDYLNRHPEIETRIPDNRN 236
Query: 249 -ALFLSGKP 256
A + P
Sbjct: 237 LACCTTDDP 245
>gi|297571671|ref|YP_003697445.1| glutamate racemase [Arcanobacterium haemolyticum DSM 20595]
gi|296932018|gb|ADH92826.1| glutamate racemase [Arcanobacterium haemolyticum DSM 20595]
Length = 282
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 105/264 (39%), Gaps = 12/264 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I +FDSGIGGL V + + +P YV D PYG +++ + +
Sbjct: 5 RNDAPIGVFDSGIGGLTVARAIIDQLPYESITYVGDTANCPYGPRPIAHVRELALNVMDH 64
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISIL 126
++ + VIACN+A + + + R + + + + PA + A T++ I ++
Sbjct: 65 LVSTG-VKMLVIACNSASSAVLHDARERYTKQLGIPVVEVIRPAARAALHATRNNKIGVI 123
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT++ + + + V ++ S+ E D + K
Sbjct: 124 ATQATIQSGAYDDAL-AVVPDVNVFSASAPRFVEFAEAGIT----TGDLVLKTAREYLEP 178
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D +VL CTHYP + V + V + +++ A+ L N ++
Sbjct: 179 IKESGVDTLVLGCTHYPFLSGVIGYVMGEGVLLVSSAEETAKDVYRALTEENLLRSSESG 238
Query: 247 D--HALFLSGKPDIAMRRLMQGFG 268
++ ++G+ + G
Sbjct: 239 APLYSFNVTGESGSFETLARRFIG 262
>gi|257468044|ref|ZP_05632140.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|317062330|ref|ZP_07926815.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688006|gb|EFS24841.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 263
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 104/263 (39%), Gaps = 13/263 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K +I +FDSG+GG VL+++ L+P + IY D+ PYG ++ + +
Sbjct: 2 KKNYNIGVFDSGVGGTTVLKRIIELLPNENIIYYGDNGNAPYGEKTIKEIQGFCLDIMDF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+ VIACNTA + ++ + ++ +G + P K A + + I +LSTP
Sbjct: 62 FMM-NNCKAVVIACNTATAASLELIKEKY-TVPVIGVISPGAKSAVEASTNKCIGVLSTP 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T ++ I Y ++ L +E + +E IK I K
Sbjct: 120 FTAASNAYADEIAKYSKTAKVYQEGCPELCPMIEAGWETFEDRETIIKNHI-----SKFP 174
Query: 190 KRTDVIVLACTHYPLIVHVF-RQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDD 247
+ D +VL CTHYP+ R +D + + L N +
Sbjct: 175 RNVDTVVLGCTHYPIAREDIARNFCGN---IVDPARETSVALYNTLKNSNLLSDSDTKGK 231
Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270
F+SG D + Q G +
Sbjct: 232 IDFFVSGDKDKFRKVAEQFLGFE 254
>gi|225351503|ref|ZP_03742526.1| hypothetical protein BIFPSEUDO_03099 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157847|gb|EEG71130.1| hypothetical protein BIFPSEUDO_03099 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 271
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ V +++R MP +Y D PYG ++K + ++
Sbjct: 18 APIGVFDSGLGGISVAREIRRDMPNERVLYFGDSANAPYGTKSPEQVRKLSDAIVKRFVE 77
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPAT 131
+ VIACNTA + +ELR + + +G PA+K A + + +TP T
Sbjct: 78 QG-VKAVVIACNTATSAAANELRDKY-DIPIIGMEPALKVACDRGHGNRQRVIVAATPLT 135
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
LR + L+ + + I L VE D + + F + +
Sbjct: 136 LRERKFAVLMDRFKTDHTIFPEPCPGLVEIVEHGQLD---DHDVVMHTLHQYFDQYDLST 192
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+ FR+L P +D ++ R +L + D
Sbjct: 193 IDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLSPEDADGGIEL 252
Query: 252 LSGKPDIAMRRLMQGF 267
+ + +L Q
Sbjct: 253 ANSDTSTQIAQLAQSL 268
>gi|229114438|ref|ZP_04243856.1| Glutamate racemase [Bacillus cereus Rock1-3]
gi|228669117|gb|EEL24541.1| Glutamate racemase [Bacillus cereus Rock1-3]
Length = 275
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 103/259 (39%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L
Sbjct: 7 HSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ V+ACNTA L+ S+ +G + P + A T+ G I ++ T T
Sbjct: 66 KQFPLKALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +H + +H + LA+ E + ++++ + +
Sbjct: 125 IQSNMYEKALHELDTYLEVHSHACPTLATVAENQLE----DTAYVTQQVKQALLPLTKED 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ ++ V + +++ A +L + H F
Sbjct: 181 IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFF 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G G +
Sbjct: 241 TTGSVLSFEHIAELWLGYE 259
>gi|164687228|ref|ZP_02211256.1| hypothetical protein CLOBAR_00869 [Clostridium bartlettii DSM
16795]
gi|164603652|gb|EDQ97117.1| hypothetical protein CLOBAR_00869 [Clostridium bartlettii DSM
16795]
Length = 258
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 10/243 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN + +I +FDSG+GG+ VL+ ++ LMP FIY D PYG + K
Sbjct: 1 MDN------SKKAIGVFDSGLGGISVLRDLKKLMPNEDFIYFGDSAYAPYGIKTKDEITK 54
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + ++K VIACNTA + + LR + + +G PA+K A ++
Sbjct: 55 RCVEIIDFFIEKG-VKAVVIACNTATSASANYLRKKYKDLPIIGMEPALKVATQGVKNNN 113
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++TP TL+ L+H + + + L VE E + +++
Sbjct: 114 IVVMATPLTLKEKKFETLMHKFRGNNKVVKMPCPKLVEIVENDLLD---DETTVVNQLKD 170
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTH+ + P +D + + + +L + +
Sbjct: 171 YYKNVNVDNLDSVVLGCTHFIFYKDYLNEFLPETAHLVDGNMGTCKHVKEILEQKHELNE 230
Query: 243 RVF 245
Sbjct: 231 ENH 233
>gi|255530901|ref|YP_003091273.1| glutamate racemase [Pedobacter heparinus DSM 2366]
gi|255343885|gb|ACU03211.1| glutamate racemase [Pedobacter heparinus DSM 2366]
Length = 279
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 11/264 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
SI +FDSG GGL V + + +P+Y++IY D+ PYG+ + + + +
Sbjct: 4 NQSIGVFDSGYGGLTVFKSIASKLPQYNYIYFGDNARTPYGDHSFETIYQYTLECVEWLF 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRS-----TFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ P L ++ACNTA ++ +P LG + P + +T S + ++
Sbjct: 64 AQGCP-LVILACNTASAKALRNIQQNVLPFKYPDRRVLGVIRPTAEIVGDFTLSKHVGVM 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ I+ + + + S + +E + +KK I+
Sbjct: 123 GTRGTVNSESYLMEINKFFPEISVSQQSCPMWVPLIENNEHIAAGADYFVKKYIDELLA- 181
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ + D IVLACTHYPL+V + + P ++ L D +A L R+
Sbjct: 182 -KDNQIDCIVLACTHYPLLVPKIKTILPDHINLLGQDDIVADSLALYLENHPEMTDRIAR 240
Query: 247 DHA--LFLSGKPDIAMRRLMQGFG 268
++ F SG + + FG
Sbjct: 241 ENKTIFFTSGDAQVFDTQASVFFG 264
>gi|324997298|ref|ZP_08118410.1| glutamate racemase [Pseudonocardia sp. P1]
Length = 283
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 9/262 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E+ + I IFDSG+GGL V + + L+P +YV D PYG +++ + +
Sbjct: 3 SERGIDAPIGIFDSGVGGLTVARSVIDLLPAEQIVYVGDTAHSPYGPRTIADIRRLALQI 62
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++++ L VIACN+A + R +P PA+++A A T++G I ++
Sbjct: 63 GDELVESGVKAL-VIACNSASAACLADFRERYPVPVVEVVRPAVRRAVAATRNGRIGVIG 121
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ ++ + I V+ VE ++ EG
Sbjct: 122 TQATIASGAYADAFDA-ARDTEITSVACPRFVDFVERG----TTSGRQVLGVAEGYLEPL 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD- 246
+ D +VL CTHYPL+ V + V + ++D AR L + +
Sbjct: 177 QRAGVDTVVLGCTHYPLLTGVLEIVLGPDVTLVSSADETARTLVRTLHTRDLLRDDTAPA 236
Query: 247 -DHALFLSGKPDIAMRRLMQGF 267
H +G P+ RRL + F
Sbjct: 237 AAHRFLATGDPEPF-RRLGRRF 257
>gi|323495305|ref|ZP_08100385.1| glutamate racemase [Vibrio brasiliensis LMG 20546]
gi|323310440|gb|EGA63624.1| glutamate racemase [Vibrio brasiliensis LMG 20546]
Length = 264
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 137/264 (51%), Gaps = 11/264 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K ILIFDSG+GGL V ++++ +P+ ++Y+ D+ +PYG + L R+ +
Sbjct: 1 MTKKTAKILIFDSGVGGLSVYKEIQAQLPQLDYLYIFDNEAYPYGELDHDTLIARVDTIV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S ++ ++Q L VIACNTA T++ LR+ S+ +G VPAIK A+ + + +++T
Sbjct: 61 SSLVAQHQIDLVVIACNTASTIVLPTLRAKL-SVPVVGVVPAIKPASNL-ANKAVGLIAT 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PAT+ R YT +LI + + L+ S L EE G + +E+K +
Sbjct: 119 PATITRPYTHDLIRDFSQSKPVELLGSTRLVDIAEEKLRGKAVDLEELKNILAP-----M 173
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ DV VL CTH+PLI + + V +D+ ++IARR + LL +T+
Sbjct: 174 ESKIDVAVLGCTHFPLIREEIQAVLTNHVQLVDSGEAIARRVKDLLVIEADAETQ--GKR 231
Query: 249 ALFLSGKP--DIAMRRLMQGFGLK 270
++ S P + A+ + + G
Sbjct: 232 EIYSSAPPWEEGALNQALYLLGFS 255
>gi|255524010|ref|ZP_05390972.1| glutamate racemase [Clostridium carboxidivorans P7]
gi|255512297|gb|EET88575.1| glutamate racemase [Clostridium carboxidivorans P7]
Length = 257
Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 7/250 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I FDSG+GG+ VL++ L+P F+Y D PYG RL F + L
Sbjct: 4 RPIGFFDSGVGGISVLKEAVKLLPGEDFVYFGDSNNAPYGIKTVEE-ASRLTFEAVEFLI 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSM-AFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA + +LR + S+ +G PA+K A + G I +++TP TL
Sbjct: 63 SKNIKAVVIACNTATSAAIIDLRKKYSSVMPVIGIEPALKPAVELKRKGQIVVMATPMTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL++ Y +Q ++ + L +E+ ++ +E++K + + +
Sbjct: 123 AERKFNNLMNRYKNQAQMYPMPCPGLVELIEQGM----VEGEEVEKYLRDKIEPLKEEGI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
IVL CTHYP I +L V +D S ++ + L + N + R ++
Sbjct: 179 AAIVLGCTHYPFIKKTLSKLLNNEVPIIDGSLGTVKQLKRELIKSNLASKKREGGKVTVY 238
Query: 252 LSGKPDIAMR 261
S D ++
Sbjct: 239 NSLDSDEIIK 248
>gi|239815499|ref|YP_002944409.1| glutamate racemase [Variovorax paradoxus S110]
gi|239802076|gb|ACS19143.1| glutamate racemase [Variovorax paradoxus S110]
Length = 269
Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 1/256 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + + +FDSG+GGL VL +R +P F+Y AD PYG D + +R + +
Sbjct: 1 MNHPVGVFDSGVGGLSVLAALRAELPHERFVYFADTAFAPYGERGDAYVIERSRKVAEQL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++ V+ACNTA T LR+ P++ +G PA+K A A +++G I++++T T
Sbjct: 61 MAEHGIKALVVACNTATTAAIHLLRAEHPALPIVGLEPALKPAVATSRTGHIAVMATRGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + L S+ ++ V L +E + I E + E + +
Sbjct: 121 LASAKYAALRDSFAGTANVRAVPCDGLVKAIEGFDTAA-ITELCARYMAEAGPLGDGPGQ 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ + ++ +P + ++D +A++AR +L + L
Sbjct: 180 VDTVVLGCTHYPLVKNELQRHAPPALRFIDTGAPVAQQARRVLASLGRLAPSGEGGLVLQ 239
Query: 252 LSGKPDIAMRRLMQGF 267
SG +
Sbjct: 240 GSGDAAVLEAAAAHWL 255
>gi|160888040|ref|ZP_02069043.1| hypothetical protein BACUNI_00448 [Bacteroides uniformis ATCC 8492]
gi|156862539|gb|EDO55970.1| hypothetical protein BACUNI_00448 [Bacteroides uniformis ATCC 8492]
Length = 279
Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 10/261 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGIFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P LG + P ++ TQS + +L+
Sbjct: 70 -MGCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ +H + + + S VE + + I+K I
Sbjct: 129 TAGTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNIGNLLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246
+ + D ++L CTH+PL++ +Q P + + + +A + L R +
Sbjct: 187 KDTQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVADSLKDYLHRHPEMDKKCTKG 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
++ + + + F
Sbjct: 247 GRCVYRTTESEEKFTESASTF 267
>gi|261249246|emb|CBG27108.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
Length = 250
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 75/246 (30%), Positives = 128/246 (52%), Gaps = 4/246 (1%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86
V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y L+VIACNT
Sbjct: 2 SVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYPLSLAVIACNT 61
Query: 87 AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
A T+ LR F + +G VPAIK AA T +G++ +L+T AT++R YT LI + +
Sbjct: 62 ASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPYTHELIARFAN 120
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+C I ++ S L E G + +E+++ + E D +VL CTH+PL+
Sbjct: 121 ECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVVLGCTHFPLLR 178
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD-IAMRRLMQ 265
Q+ P +D+ +IARR LL + A ++ P + ++Q
Sbjct: 179 DELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQ 238
Query: 266 GFGLKS 271
+G ++
Sbjct: 239 RYGFET 244
>gi|317050732|ref|YP_004111848.1| glutamate racemase [Desulfurispirillum indicum S5]
gi|316945816|gb|ADU65292.1| glutamate racemase [Desulfurispirillum indicum S5]
Length = 260
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 9/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GG+ VL+ +R +P + +Y+ D PYG + + + D L
Sbjct: 2 KTIGIFDSGVGGITVLKAIRRALPTFDILYLGDTARVPYGTKSRETVLRYSLQ-VGDFLY 60
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA E+R+ + + +G + P + A ++SG I+++ T AT+
Sbjct: 61 RKGIDLLVIACNTATAYGLHEIRARY-DIPVIGVIEPGAQATVALSRSGRIAVIGTSATV 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + I Y+ + ++ +L VEE CG + +++ + + +
Sbjct: 120 QSGQYRSTIQHYLPDADVREIACPMLVPLVEENWCGTDVAHLILQRYL-----GQLRGQV 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP++ ++ P V +D+++ AR L ++
Sbjct: 175 DTLVLGCTHYPMLKEDIARVLP-GVTQVDSAEETARTIVGLTGVPAPGTLGTLGTTTYYM 233
Query: 253 SGKPDIAMRRLMQGFG 268
+ G
Sbjct: 234 TDTSQRFAEIASSFLG 249
>gi|167578823|ref|ZP_02371697.1| glutamate racemase [Burkholderia thailandensis TXDOH]
Length = 290
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 8/241 (3%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + P + ++ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPHAPDSRVSPARSPIGIFDSGLGGLSVLRAVRERLPDEAIVYVADSRHAPYGPRDDA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + ++ + L VIACNTA +R P + +G P IK AA ++
Sbjct: 61 FIIERTLAIGEWLVAQGAKAL-VIACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR LI + + C + L +E G E++
Sbjct: 119 KTRVAGVLATQATLRSARFEALIARHAADCRFICQAGHGLVEAIERGDTG----SPELRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
++ G D +VL CTHYP + R ++ + +D SD+IAR+ +L
Sbjct: 175 QLAGFLEPMLEAGADTLVLGCTHYPFLDAAIRDVTSSRLHLIDTSDAIARQLARILDERG 234
Query: 239 T 239
Sbjct: 235 L 235
>gi|262280802|ref|ZP_06058585.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262257702|gb|EEY76437.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 288
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 11/260 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ D
Sbjct: 19 ADAPIGIFDSGIGGMSVAAEIARYLPNERIVYYADTAYVPYGPRSDEEIRELTARAV-DW 77
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPA
Sbjct: 78 LYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPA 137
Query: 131 TLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T R +++ + + + ++++ L VE ++ + +K+ ++
Sbjct: 138 TFRGQLIKDVVEKFAIPAGVKVMTLTNLELVPCVEAGQQMGEVCLNALKEVLQ----PAA 193
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D +VL CTHYP + L +D+ ++AR+ +L + ++ +
Sbjct: 194 EQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNALLCDQIGQNV 253
Query: 249 A---LFLSGKPDIAMRRLMQ 265
A ++SG A++ ++Q
Sbjct: 254 ARIECYVSGNNAEALQPVLQ 273
>gi|332300836|ref|YP_004442757.1| Glutamate racemase [Porphyromonas asaccharolytica DSM 20707]
gi|332177899|gb|AEE13589.1| Glutamate racemase [Porphyromonas asaccharolytica DSM 20707]
Length = 281
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 112/264 (42%), Gaps = 14/264 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++++ I +FDSG GGL +L+K++ +P+Y F+Y+ D+ PYG+ + +
Sbjct: 1 MQQIEGPIGVFDSGYGGLTILRKLQEQLPQYDFVYLGDNARSPYGSRSMRVVYQFTREAV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRST-FPSM-------AFLGAV-PAIKQAAAYTQ 119
+ D P L ++ACNTA +++ P + LG + P ++ T
Sbjct: 61 ERLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTG 119
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + IL+T T+ IH + + + VE + ++K
Sbjct: 120 TKHVGILATEGTVSSESYVTEIHKLYPDVTVVQEACPLWVPIVETGESDSPGADFFVRKH 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+E + ++ D I+L CTHYP+++ R+L + + + +A+ L R
Sbjct: 180 LERLLA--QDEKIDTIILGCTHYPILMPKIRRLLTPTIKVVSQGELVAKSLEEYLVRHPE 237
Query: 240 HQTRVF--DDHALFLSGKPDIAMR 261
++ + + + + R
Sbjct: 238 MAAQLTRGGTTRYYTTEQTERFSR 261
>gi|296186868|ref|ZP_06855269.1| glutamate racemase [Clostridium carboxidivorans P7]
gi|296048582|gb|EFG88015.1| glutamate racemase [Clostridium carboxidivorans P7]
Length = 259
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 7/250 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I FDSG+GG+ VL++ L+P F+Y D PYG RL F + L
Sbjct: 6 RPIGFFDSGVGGISVLKEAVKLLPGEDFVYFGDSNNAPYGIKTVEE-ASRLTFEAVEFLI 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSM-AFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA + +LR + S+ +G PA+K A + G I +++TP TL
Sbjct: 65 SKNIKAVVIACNTATSAAIIDLRKKYSSVMPVIGIEPALKPAVELKRKGQIVVMATPMTL 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL++ Y +Q ++ + L +E+ ++ +E++K + + +
Sbjct: 125 AERKFNNLMNRYKNQAQMYPMPCPGLVELIEQGM----VEGEEVEKYLRDKIEPLKEEGI 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
IVL CTHYP I +L V +D S ++ + L + N + R ++
Sbjct: 181 AAIVLGCTHYPFIKKTLSKLLNNEVPIIDGSLGTVKQLKRELIKSNLASKKREGGKVTVY 240
Query: 252 LSGKPDIAMR 261
S D ++
Sbjct: 241 NSLDSDEIIK 250
>gi|228471185|ref|ZP_04055998.1| glutamate racemase [Porphyromonas uenonis 60-3]
gi|228307000|gb|EEK16082.1| glutamate racemase [Porphyromonas uenonis 60-3]
Length = 281
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 114/264 (43%), Gaps = 14/264 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++++ I +FDSG GGL +L+K+R +P+Y F+Y+ D+ PYG+ H + +
Sbjct: 1 MQQIEGPIGVFDSGYGGLTILRKLREQLPQYDFVYLGDNARSPYGSRSMHVVYQFTREAV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRST-FPSM-------AFLGAV-PAIKQAAAYTQ 119
+ D P L ++ACNTA +++ P + LG + P ++ T
Sbjct: 61 EKLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTG 119
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + IL+T T+ IH + + + VE + ++K
Sbjct: 120 TKHVGILATEGTVSSESYVAEIHKLYPDMTVVQEACPLWVPIVETGESDSPGTDFFVRKH 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+E + ++ D I+L CTHYP+++ ++L + + + +A+ L R
Sbjct: 180 LERLLA--QDEKIDTIILGCTHYPILMPKIQRLLTPSIKVVAQGELVAKSLEEYLVRHPE 237
Query: 240 HQTRVF--DDHALFLSGKPDIAMR 261
+ ++ + + + + R
Sbjct: 238 MEAQLTRGGTTRYYTTEQTERFSR 261
>gi|239502810|ref|ZP_04662120.1| putative glutamate racemase [Acinetobacter baumannii AB900]
Length = 266
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNNNSPIGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + VIACNT + + +R+ ++ + PA+K A A T S I +L+T
Sbjct: 61 SNLVAHGKCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAMTVSKHIEVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E E+K ++
Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDD 247
++ D I+L CTHYP + + +++ + ++ S+++ A+ R L + ++ +
Sbjct: 176 EQKVDTIILGCTHYPFVSDMIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGN 235
Query: 248 HALFLSGKP 256
H ++ S P
Sbjct: 236 HIIWTSSDP 244
>gi|91782687|ref|YP_557893.1| glutamate racemase [Burkholderia xenovorans LB400]
gi|91686641|gb|ABE29841.1| glutamate racemase [Burkholderia xenovorans LB400]
Length = 295
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 9/246 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++
Sbjct: 20 RAPVGIFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLV 79
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +R P + +G P IK AA +++ + +L+T TL
Sbjct: 80 -RQGAKALVVACNTATAQSIAMVREKLP-IPLVGVEPGIKPAALQSKTRVAGVLATQVTL 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE + E++ + G
Sbjct: 138 RSARFQALLERYAADCRFLCQPGHGLVQAVER----CDVGSAELRALLRGYLQPMLDAGA 193
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--- 249
D +VL CTHYP + R++ + +D S +IAR+ +L + A
Sbjct: 194 DTLVLGCTHYPFLDTAIREIVGDRLALIDTSVAIARQLERVLDQHGLRAAPESAGTALPR 253
Query: 250 LFLSGK 255
+ +G
Sbjct: 254 FYSTGD 259
>gi|134283052|ref|ZP_01769754.1| glutamate racemase [Burkholderia pseudomallei 305]
gi|237509359|ref|ZP_04522074.1| glutamate racemase [Burkholderia pseudomallei MSHR346]
gi|134245700|gb|EBA45792.1| glutamate racemase [Burkholderia pseudomallei 305]
gi|235001564|gb|EEP50988.1| glutamate racemase [Burkholderia pseudomallei MSHR346]
Length = 290
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + ++ + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|317478578|ref|ZP_07937735.1| Asp/Glu/Hydantoin racemase [Bacteroides sp. 4_1_36]
gi|316905219|gb|EFV27016.1| Asp/Glu/Hydantoin racemase [Bacteroides sp. 4_1_36]
Length = 279
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 10/261 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGIFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P LG + P ++ TQS + +L+
Sbjct: 70 -MGCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ +H + + + S VE + + I+K I
Sbjct: 129 TAGTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNIGNLLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246
+ + D ++L CTH+PL++ +Q P + + + +A + L R +
Sbjct: 187 KDTQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVADSLKDYLHRHPEMDRKCTKG 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
++ + + + F
Sbjct: 247 GRCVYRTTESEEKFTESASTF 267
>gi|297242787|ref|ZP_06926725.1| glutamate racemase [Gardnerella vaginalis AMD]
gi|296888998|gb|EFH27732.1| glutamate racemase [Gardnerella vaginalis AMD]
Length = 257
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L +I +FDSG+GG+ V +++ +P +Y D PYG +KK +
Sbjct: 3 LSAAIGVFDSGLGGISVARQLHAALPHERIVYFGDSANAPYGIKTPEEVKKLSFAIVEHF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTP 129
+ + VIACNTA + ++LR+ + ++ +G PA+K A + S + + +TP
Sbjct: 63 V-RLNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGESQRVIVAATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TLR ++L+ + I L VE D + + F E +
Sbjct: 121 LTLRERKFADLLQRFSQNNTIFSQPCPDLVRIVERGELN---DRDVVFAALHKYFDEYDL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+ FR+ P + +D ++ R +L N + +
Sbjct: 178 DSIDSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKILELNNELASDSQEGSI 237
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ + M++L +
Sbjct: 238 TLTNSDTSLRMQQLAKSL 255
>gi|261415102|ref|YP_003248785.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261371558|gb|ACX74303.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302327044|gb|ADL26245.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 269
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 10/262 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +LQK+R +P+Y ++Y+ D+ PYG+ + + + ++ +
Sbjct: 2 IGVFDSGFGGLTILQKLRHTLPQYDYLYLGDNARAPYGSRSFETIYRYTLQSVRELFHRG 61
Query: 76 QPVLSVIACNTAFTLIKDELRS-----TFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
P L ++ACNTA ++ FP LG V P ++ ++++G I I +T
Sbjct: 62 CP-LVILACNTASAKALRSIQQQVLPVEFPDRRVLGIVRPTAEEIGNFSKTGHIGIFATA 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ I + + + + VE G + +KK+++
Sbjct: 121 GTVSSNSYVLEISHFFPNLKVTQHACPMWVPLVEYGERGTEGARFFVKKDVDQLLAA--D 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++LACTHYPL+ R P V + D +A + L R + R+ +
Sbjct: 179 PEIDTVLLACTHYPLLEDEIRAALPPHVRLVVQGDIVADKTLDYLKRHVDMENRLSKGGS 238
Query: 250 L-FLSGKPDIAMRRLMQGFGLK 270
+ +L+ ++ FG++
Sbjct: 239 VHYLTTDTAEFFKKGAFRFGME 260
>gi|325068394|ref|ZP_08127067.1| glutamate racemase [Actinomyces oris K20]
Length = 287
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 105/257 (40%), Gaps = 12/257 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P+ +Y+ D PYG + ++ + + +++D+
Sbjct: 1 MFDSGVGGLTVARSVLDQLPQEQVLYIGDTANSPYGPRDIAEVRSLALGIMDELVDRG-V 59
Query: 78 VLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + + R + + + + PA + AA T++G + +++T T+
Sbjct: 60 KLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGTVD 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V + + E E+ E + D
Sbjct: 120 SRAYDDALQA-VPGVELVSQACPRFVELAERGVT----TGPEVLDVAEEYLAPIKAAGVD 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251
++L CTHYPL+V + V + +SD A+ L N + + H
Sbjct: 175 TLILGCTHYPLLVGPISYVMGRDVTLVTSSDETAKDVYRALAGKNLLRGPDAPEPHHDFA 234
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 235 STGDPEAFSVLARRFLG 251
>gi|134296381|ref|YP_001120116.1| glutamate racemase [Burkholderia vietnamiensis G4]
gi|134139538|gb|ABO55281.1| glutamate racemase [Burkholderia vietnamiensis G4]
Length = 286
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 7/255 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I IFDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + +
Sbjct: 12 RPTAPIGIFDSGLGGLSVLRAVRAQLPGESFVYVADSRHAPYGPRDEAFITERTLAIC-E 70
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + V+ACNTA +R S+ +G P IK AAA + +G+ +L+T +
Sbjct: 71 WLARDGAKALVVACNTATARAIAAVRERL-SIPLVGVEPGIKPAAAVSATGVAGVLATQS 129
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL L+ Y + L +E ++ +E
Sbjct: 130 TLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALLERYLQPMIDA 185
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP R L + +D SD+IAR+ +L
Sbjct: 186 GADTLVLGCTHYPFFTAAIRDLVGDRLTIVDTSDAIARQLARVLDERGLRAPAGAPAAPP 245
Query: 251 -FLSGKPDIAMRRLM 264
F S + +R L
Sbjct: 246 RFCSTSDGVQLRALA 260
>gi|52425789|ref|YP_088926.1| glutamate racemase [Mannheimia succiniciproducens MBEL55E]
gi|52307841|gb|AAU38341.1| MurI protein [Mannheimia succiniciproducens MBEL55E]
Length = 271
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ++ +++ +IL FDSG+GG V ++++ L+P H++Y D+ FPY + +
Sbjct: 1 MIMNT-----EIKPTILFFDSGVGGFSVYKEVKQLLPNAHYLYCFDNAFFPYSEKSEEVI 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + I ++Y VIACNTA T++ LR F ++ +G VPAIK AA +Q+
Sbjct: 56 IERTLTVCKKINEQYPLDAIVIACNTASTVVLPTLRQHF-AIPIIGTVPAIKPAAEKSQT 114
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L+T T++RTY ++LI Y C + + S LA E G + ++ E+
Sbjct: 115 KHIGLLATKGTVKRTYVTSLIERYAQDCIVEKIGSTKLAEIAERKLHGESVDLIALRNEL 174
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D ++L CTH+PLI + P + + +IA+R LL I T
Sbjct: 175 TPWI---QLSDLDSVILGCTHFPLIKEEIQLCLPQVKFYFEPGTAIAKRVFDLLAGI-TP 230
Query: 241 QTRVFDDHALFLSGKPDIAMRRL--MQGFGLK 270
+ + D+ +F + ++ + + ++ +G K
Sbjct: 231 KDKTETDNCIFYTKHFELEDKFIQALRFWGFK 262
>gi|218516359|ref|ZP_03513199.1| glutamate racemase [Rhizobium etli 8C-3]
Length = 236
Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats.
Identities = 125/236 (52%), Positives = 171/236 (72%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MPE FIYVADD GFPYG WE+ ALK+R++ LF +L Y P + +IACNTAFTL+ +L
Sbjct: 1 MPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLTDYDPEVCIIACNTAFTLVGADL 60
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R YT +LI S+ QC++ LV S
Sbjct: 61 RAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRAYTRDLIQSFAQQCNVRLVGS 120
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
LA E Y G + +D + EI+ CF+EK+ ++TD++VLACTHYP + ++FR+++PW
Sbjct: 121 ENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTDIVVLACTHYPFMANLFRRIAPW 180
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
PVDWLD +++IARRAR L+P + D A+F SG+ D A RRLMQGFGL++
Sbjct: 181 PVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTSGQQDFATRRLMQGFGLRA 236
>gi|212715492|ref|ZP_03323620.1| hypothetical protein BIFCAT_00389 [Bifidobacterium catenulatum DSM
16992]
gi|212661574|gb|EEB22149.1| hypothetical protein BIFCAT_00389 [Bifidobacterium catenulatum DSM
16992]
Length = 271
Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ V +++R MP +Y D PYG ++K + ++
Sbjct: 18 APIGVFDSGLGGISVAREIRRDMPNERVLYFGDSANAPYGTKSPEQVRKLSDAIVKRFVE 77
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPAT 131
+ VIACNTA + +ELR + + +G PA+K A + + +TP T
Sbjct: 78 QG-VKAVVIACNTATSAAANELRDKY-DIPIIGMEPALKVACDRGHGNRQRVIVAATPLT 135
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
LR + L+ + + I L VE D + + F + +
Sbjct: 136 LRERKFAVLMDRFKTDHTIFPEPCPGLVEIVEHGQLD---DHDVVMHTLHQYFDQYDLST 192
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+ FR+L P +D ++ R +L + +
Sbjct: 193 IDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLSPEDAEGGIEL 252
Query: 252 LSGKPDIAMRRLMQGF 267
+ + +L Q
Sbjct: 253 ANSDTSAQIAQLAQSL 268
>gi|171059222|ref|YP_001791571.1| glutamate racemase [Leptothrix cholodnii SP-6]
gi|170776667|gb|ACB34806.1| glutamate racemase [Leptothrix cholodnii SP-6]
Length = 272
Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 11/272 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ P + +++ I +FDSG+GGL VL+ + L+P +YVAD PYG +++
Sbjct: 1 MPTSPLQHRVR--IGVFDSGLGGLSVLRAIHELLPSATLMYVADSGHAPYGERSVAYVEE 58
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + + + D+ VL V+ACNTA LR A +G P IK AAA T++G
Sbjct: 59 RSLRIAAFLRDQGAQVL-VVACNTATAAAVQALRMHHRDWAIVGVEPGIKPAAAMTRNGR 117
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T TLR L ++ + + L + LA+ +E A + + + ++
Sbjct: 118 IGVLATEGTLRSDRFKLLAQAHAAHVELFLQACPGLAAAIESGA----LTSPAVTERVQT 173
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-LPRI---N 238
C + D +VL CTHYP + + V +D +D++ARR L L + +
Sbjct: 174 CCAPLREHQVDTVVLGCTHYPFVANQIAAALGPDVVLIDTADAVARRTLALSLAQAAPDD 233
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
++ +G + +
Sbjct: 234 DLNQDDRPVTRMWTTGDRLLLANVAERWLTFP 265
>gi|331270559|ref|YP_004397051.1| glutamate racemase [Clostridium botulinum BKT015925]
gi|329127109|gb|AEB77054.1| glutamate racemase [Clostridium botulinum BKT015925]
Length = 257
Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 6/256 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GGL VL++ ++P FIY D PYG + +KK +LD
Sbjct: 7 PIGFFDSGVGGLSVLKEAIKILPNEDFIYFGDSKNAPYGTKKVDEVKKLTFDAVKMLLD- 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y V+ACNTA + ++LR+T+ + +G PA+K A +Q G I I++T TL
Sbjct: 66 YNVKAIVVACNTATSAAIEDLRNTYKDIPIIGIEPALKPAVELSQDGKIVIMATNMTLAE 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L+ Y + I + L +E+ ++ E+ + + G + +
Sbjct: 126 KKFNKLMSKYKDEYDIVSLPCPGLVEYIEKGI----VQGKELNEFLSGRLSILDKDKIAS 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALFLS 253
+VL CTHYP + + V +D S A + + L + N+ ++ + S
Sbjct: 182 VVLGCTHYPFVKKELSNILGDEVVIIDGSFGTASQLKRKLIKNNSINKDNKKGKITVLNS 241
Query: 254 GKPDIAMRRLMQGFGL 269
+ + ++ + G+
Sbjct: 242 LQDEEIIKISKKLLGI 257
>gi|222837977|gb|EEE76342.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
+ I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ D +++R + +
Sbjct: 312 SPIGVFDSGIGGLSVLQALRHELPHERFVYLADSGNAPYGDARGDAFVQQRTRTIARHLR 371
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA D LR+ P + +G PAIK A+ +Q+G + +++T T+
Sbjct: 372 EQHQIKVLVIACNTATAAAVDMLRAEMPELPLIGVEPAIKPASLSSQTGHVGVMATRGTV 431
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-- 190
+ L+ + + H+ LA +EE + + D + E+
Sbjct: 432 SSARFARLVAEHGQRVQFHVQPCDGLAKAIEE-STEQPVPADPMATEVAQLCARYVNALG 490
Query: 191 -------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
D +VL CTHY R L + ++D +AR+ R +L R+ T +
Sbjct: 491 SFGQKTGEMDSLVLGCTHYIFAREQLRTLLGPDIQFIDTGAPVARQTRRVLDRLGTLASE 550
Query: 244 VFD------DHALFLSGKPDIAMRRLMQGFGLKS 271
L +G + L +
Sbjct: 551 SGPLPAAEGQVQLMTTGSLQALQSAASRWLDLPA 584
>gi|150010273|ref|YP_001305016.1| glutamate racemase [Parabacteroides distasonis ATCC 8503]
gi|301308360|ref|ZP_07214314.1| glutamate racemase [Bacteroides sp. 20_3]
gi|149938697|gb|ABR45394.1| glutamate racemase [Parabacteroides distasonis ATCC 8503]
gi|300833830|gb|EFK64446.1| glutamate racemase [Bacteroides sp. 20_3]
Length = 276
Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 96/259 (37%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S + +
Sbjct: 7 GPIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSRLFE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA ++ P+ LG + P ++ +++ I I+
Sbjct: 67 SG-CQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVG 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + I + + + VE + +KK I+
Sbjct: 126 TSGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHLLS-- 183
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245
+ D ++L CTHYPL++ R P + + +A R L R ++
Sbjct: 184 VDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRKLTKG 243
Query: 246 DDHALFLSGKPDIAMRRLM 264
+ +
Sbjct: 244 GSCRFLTTESAEKFSEAAS 262
>gi|126458024|ref|YP_001074561.1| glutamate racemase [Burkholderia pseudomallei 1106a]
gi|167722449|ref|ZP_02405685.1| glutamate racemase [Burkholderia pseudomallei DM98]
gi|167826991|ref|ZP_02458462.1| glutamate racemase [Burkholderia pseudomallei 9]
gi|167848505|ref|ZP_02474013.1| glutamate racemase [Burkholderia pseudomallei B7210]
gi|167897057|ref|ZP_02484459.1| glutamate racemase [Burkholderia pseudomallei 7894]
gi|167905441|ref|ZP_02492646.1| glutamate racemase [Burkholderia pseudomallei NCTC 13177]
gi|167913734|ref|ZP_02500825.1| glutamate racemase [Burkholderia pseudomallei 112]
gi|167921675|ref|ZP_02508766.1| glutamate racemase [Burkholderia pseudomallei BCC215]
gi|217424462|ref|ZP_03455960.1| glutamate racemase [Burkholderia pseudomallei 576]
gi|226199169|ref|ZP_03794730.1| glutamate racemase [Burkholderia pseudomallei Pakistan 9]
gi|242313204|ref|ZP_04812221.1| glutamate racemase [Burkholderia pseudomallei 1106b]
gi|254198957|ref|ZP_04905375.1| glutamate racemase [Burkholderia pseudomallei S13]
gi|254296816|ref|ZP_04964270.1| glutamate racemase [Burkholderia pseudomallei 406e]
gi|126231792|gb|ABN95205.1| glutamate racemase [Burkholderia pseudomallei 1106a]
gi|157806660|gb|EDO83830.1| glutamate racemase [Burkholderia pseudomallei 406e]
gi|169657129|gb|EDS88523.1| glutamate racemase [Burkholderia pseudomallei S13]
gi|217392386|gb|EEC32410.1| glutamate racemase [Burkholderia pseudomallei 576]
gi|225928768|gb|EEH24794.1| glutamate racemase [Burkholderia pseudomallei Pakistan 9]
gi|242136443|gb|EES22846.1| glutamate racemase [Burkholderia pseudomallei 1106b]
Length = 290
Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + ++ + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|320534621|ref|ZP_08035066.1| glutamate racemase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320133141|gb|EFW25644.1| glutamate racemase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 287
Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 12/257 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P +Y+ D PYG + ++ + + +++D+
Sbjct: 1 MFDSGVGGLTVARSVLDQLPHEQVLYIGDTANGPYGPRDIAEVRSLALSIMDELVDRG-V 59
Query: 78 VLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + + R + + + + PA + AA T++G + +++T T+
Sbjct: 60 KLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGTVD 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V + + E E+ E + D
Sbjct: 120 SRAYDDALQA-VPGVELVSQACPRFVELAERGVT----TGPEVLDVAEEYLAPIKAAGVD 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALF 251
++L CTHYPL+V + V + +SD A+ L N + + H
Sbjct: 175 TLILGCTHYPLLVGPISYVMGEDVALVTSSDETAKDVYRALAGKNLLRGPDAPEPRHDFA 234
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 235 STGDPEAFSVLARRFLG 251
>gi|312885977|ref|ZP_07745605.1| glutamate racemase [Mucilaginibacter paludis DSM 18603]
gi|311301514|gb|EFQ78555.1| glutamate racemase [Mucilaginibacter paludis DSM 18603]
Length = 276
Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 9/239 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL V + + L+P+Y +IY+ D+ PYG+ + + +
Sbjct: 6 PIGVFDSGYGGLTVFRSIAKLLPQYDYIYLGDNSRAPYGSRSFKTIHQYTWECVQHLFKM 65
Query: 75 YQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
P L ++ACNTA +L+ S LG + P + Y+++ I +L T
Sbjct: 66 GCP-LVILACNTASAKALRTIQQHDLKKHDSSKRVLGVIRPTAEVIGNYSKTKEIGVLGT 124
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I ++ +++ + + +E + +K+ ++ +
Sbjct: 125 KGTVQSGSYQIEIGNFFPDVNVYQQACPLWVPLIENGEYDKPGADYFVKQYLDQILA--Q 182
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
R D ++LACTHYPL+ R P V + D +A+ L R ++++ +
Sbjct: 183 SPRIDTLLLACTHYPLLEQKIRAYLPADVQAVSQGDIVAQSLVNYLQRHPEMESKLTKN 241
>gi|53721405|ref|YP_110390.1| glutamate racemase [Burkholderia pseudomallei K96243]
gi|167818613|ref|ZP_02450293.1| glutamate racemase [Burkholderia pseudomallei 91]
gi|52211819|emb|CAH37818.1| putative glutamate racemase [Burkholderia pseudomallei K96243]
Length = 290
Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSPAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + ++ + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|325518393|gb|EGC98114.1| glutamate racemase [Burkholderia sp. TJI49]
Length = 285
Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 69/273 (25%), Positives = 110/273 (40%), Gaps = 8/273 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M I + + IFDSG+GGL VL+ R +P +YVAD PYG +D +
Sbjct: 1 MTIQPAASGARPAAPVGIFDSGLGGLSVLRAARAHLPHESLVYVADTRYNPYGERDDAFI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + + L V+ACNTA +R ++ +G P IK A + S
Sbjct: 61 TERTLAIGEWFVQQGAKAL-VVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVQQSAS 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G+ +L+T ATLR L+ + + C L +E G ++ +
Sbjct: 119 GVAGVLATQATLRSARFQALLERHGAGCRFICQPGHGLVQAIESGDTG----SPALRALL 174
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D IVL CTHYP + R + V +D SD+IA + +L + +
Sbjct: 175 DSYLRPMLDAGADAIVLGCTHYPFLTATIRDIVGERVTIVDTSDAIALQLARVLDQHDLR 234
Query: 241 QTRVFD--DHALFLSGKPDIAMRRLMQGFGLKS 271
+ +G GL +
Sbjct: 235 APGGAPVAPPRFYSTGDGRQLQALASTLLGLDA 267
>gi|284009189|emb|CBA76250.1| glutamate racemase [Arsenophonus nasoniae]
Length = 279
Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 79/243 (32%), Positives = 127/243 (52%), Gaps = 3/243 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + +ILIFDSG+GGL V +++R L+P+ H+IY D+ FPYG + +R++
Sbjct: 14 KTARPTILIFDSGVGGLSVYREVRQLLPDLHYIYAFDNDAFPYGEKSAEFIIERIIRFID 73
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I K+ +++IACNTA T+ LR+ F +G VPAIK A T++G+I +L+T
Sbjct: 74 QIQQKHALAIAIIACNTASTVSLPILRAHF-QFPIIGVVPAIKPATKLTRNGIIGLLATK 132
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ YT LI + C + +++S L E+ G I + + + ++ KE
Sbjct: 133 ATVSGNYTRELIDRFAVDCKVEMIASSELVELAEKKLHGQIISTETLVRIVKPWLKMKEP 192
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D IVL CTH+PL+ +++ +D+ +IARRA L+ + A
Sbjct: 193 --PDTIVLGCTHFPLLSAELKEVLFDGTRLIDSGAAIARRAVWLINNHPDLILTKNKNIA 250
Query: 250 LFL 252
Sbjct: 251 YCT 253
>gi|227495766|ref|ZP_03926077.1| glutamate racemase [Actinomyces urogenitalis DSM 15434]
gi|226834695|gb|EEH67078.1| glutamate racemase [Actinomyces urogenitalis DSM 15434]
Length = 288
Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 103/262 (39%), Gaps = 12/262 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V + + +P +Y+ D PYG +++ + + +++
Sbjct: 11 DAPIGMFDSGVGGLTVARAVLDQLPGEQVLYIGDTEHSPYGPRPIDEVRELALAVMDELV 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYTQSGLISILST 128
D + VIACNTA + + R + + + + PA + AA T++G I +++T
Sbjct: 71 DSG-VKMLVIACNTASAAVLHDARRRYTLGKGVPVVEVIHPAARAAARVTRNGRIGLIAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ ++ + + V + + E ++ E +
Sbjct: 130 QGTVDSRAYADALEA-VPGVELLSTACPDFVELAERGVT----TGPQVMSRAEEYLLPLR 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD- 247
D ++L CTHYPL++ + V + +S+ A+ L +
Sbjct: 185 EAGVDTLILGCTHYPLLIGPISYVMGEDVTLVTSSEETAKDVYRGLASQGLLRDPDAPAP 244
Query: 248 -HALFLSGKPDIAMRRLMQGFG 268
H +G P+ + G
Sbjct: 245 VHEFRATGDPESFAVLARRFLG 266
>gi|167572233|ref|ZP_02365107.1| glutamate racemase [Burkholderia oklahomensis C6786]
Length = 290
Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 6/230 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + +
Sbjct: 12 SPARAPIGIFDSGLGGLSVLRAVRARLPDEALVYVADSRHAPYGPRDDAFIVERTLAI-G 70
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T
Sbjct: 71 EWLAAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQ 129
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
ATLR LI + C + L VE G E++ + G
Sbjct: 130 ATLRSARFEALIARHADDCRFICQAGHGLVEAVERGDTG----SPELRALLTGYLEPMLA 185
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
D +VL CTHYP + R ++ + +D SD+IAR+ +L
Sbjct: 186 AGADTLVLGCTHYPFLDAAIRDVASDRLHLIDTSDAIARQLSRILDERGL 235
>gi|121534586|ref|ZP_01666408.1| glutamate racemase [Thermosinus carboxydivorans Nor1]
gi|121306838|gb|EAX47758.1| glutamate racemase [Thermosinus carboxydivorans Nor1]
Length = 269
Score = 271 bits (695), Expect = 7e-71, Method: Composition-based stats.
Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 7/251 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIGGL V++++ LMP+ HFIY D PYG+ + + + ++
Sbjct: 6 PIGVCDSGIGGLTVVKELLELMPDEHFIYFGDTARIPYGDRPPAEILTFMRQILRFFTEQ 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNT + D FP +G I+ A A ++SG I +++T AT+
Sbjct: 66 K-VKMVVVACNTMTAVGLDMAWREFP-FPVVGVNTGIRSALAASRSGRIGVIATQATVAS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ ++ + L + L +E +++ ++ + D
Sbjct: 124 GLHERTAKAIDAKAVVALQACPKLVPLIER----EQLEGPAVEAAVAEYLRPLRDAGVDA 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYP I V + V ++ + A A LL + + S
Sbjct: 180 LILGCTHYPFISPVISRYLGPAVTIVNPARETALDAVSLLAEYDL-RGNGPGSVRFCFSA 238
Query: 255 KPDIAMRRLMQ 265
+ A R +
Sbjct: 239 DLERARRLAAR 249
>gi|219850108|ref|YP_002464541.1| glutamate racemase [Chloroflexus aggregans DSM 9485]
gi|219544367|gb|ACL26105.1| glutamate racemase [Chloroflexus aggregans DSM 9485]
Length = 266
Score = 271 bits (695), Expect = 7e-71, Method: Composition-based stats.
Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 10/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+AD PYG ++ R + ++++
Sbjct: 2 IGIFDSGLGGLTVTRAIHERLPTADLLYLADSAYCPYGPRPVEEIRARALACGQWLVEQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA + LRST P + +G P +K A A T+ G +++++T TL
Sbjct: 62 A-QIVVVACNTATAAAIEVLRSTLP-VPVVGMEPGVKPAVAATRRGKVAVMATSGTLASD 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI++Y ++ ++ ++ L +VE A I ++ K I I
Sbjct: 120 RFRALINAYAAEVEVYALACPDLVEQVEAGA----IADEYTKTLIANHLAAAADADV--I 173
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+P + + R + V +D ++A + + RI R F +G
Sbjct: 174 VLGCTHFPPLTPLIRACAGPEVTIIDTGPAVAAQTARIAERIGL--PRGEGTLRCFTTGD 231
Query: 256 PDIAMRRLMQGFG 268
P+ + L+ +G
Sbjct: 232 PEAIAQALVHVWG 244
>gi|261249981|ref|ZP_05942558.1| glutamate racemase [Vibrio orientalis CIP 102891]
gi|260939485|gb|EEX95470.1| glutamate racemase [Vibrio orientalis CIP 102891]
Length = 267
Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K Q ILIFDSG+GGL V Q+++ +P+ ++Y+ D+ +PYG + L R+ L +
Sbjct: 5 SKQQAKILIFDSGVGGLSVYQEIQSKLPQLEYLYIFDNEAYPYGELDHDTLIDRVDRLVT 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ K+ L VIACNTA T++ LR+ ++ +G VPAIK A+ + + +++TP
Sbjct: 65 SLVAKHHIDLVVIACNTASTIVLPTLRAKL-TIPVVGVVPAIKPASNL-ANKAVGLIATP 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R YT +LI + + L+ S L EE G + E+K+ +
Sbjct: 123 ATVTRPYTHDLIRDFSQSKPVELLGSTRLVDIAEEKLRGKAVDLAELKQILAA-----IE 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ DV VL CTH+PLI + + V +D+ ++IARR LL +TR
Sbjct: 178 NKVDVAVLGCTHFPLIKQEIQAVLTDRVLLVDSGEAIARRVEDLLETTGKKETR--GKRE 235
Query: 250 LFLSGKP--DIAMRRLMQGFGLK 270
+F + P + A+ + + G
Sbjct: 236 IFSTAPPWEEGALNKALHQLGFS 258
>gi|270295594|ref|ZP_06201795.1| glutamate racemase [Bacteroides sp. D20]
gi|270274841|gb|EFA20702.1| glutamate racemase [Bacteroides sp. D20]
Length = 279
Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 10/261 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL +L K+R ++P+Y +IY+ D+ PYG + + + + + +
Sbjct: 10 GPIGIFDSGYGGLTILSKIREVLPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTKLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L P LG + P ++ TQS + +L+
Sbjct: 70 -MGCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ +H + + + S VE + + I+K I
Sbjct: 129 TAGTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNIGNLLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246
+ + D ++L CTH+PL++ +Q P + + + +A + L R +
Sbjct: 187 KDTQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVADSLKDYLHRHPEMDKKCTKG 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
++ + + + F
Sbjct: 247 GRCVYRTTESEEKFTESASTF 267
>gi|167565061|ref|ZP_02357977.1| glutamate racemase [Burkholderia oklahomensis EO147]
Length = 290
Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats.
Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 6/230 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + +
Sbjct: 12 SPARAPIGIFDSGLGGLSVLRAVRARLPDEALVYVADSRHAPYGPRDDAFIVERTLAI-G 70
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T
Sbjct: 71 EWLAAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQ 129
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
ATLR T LI + C + L VE G E++ + G
Sbjct: 130 ATLRSTRFEALIARHADDCRFICQAGHGLVEAVERGDTG----SPELRALLTGYLEPMLA 185
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
D +VL CTHYP + R ++ + +D SD+IAR+ +L
Sbjct: 186 AGADTLVLGCTHYPFLDAAIRDVASDRLHLIDTSDAIARQLSRILDERGL 235
>gi|50086249|ref|YP_047759.1| glutamate racemase [Acinetobacter sp. ADP1]
gi|49532225|emb|CAG69937.1| glutamate racemase [Acinetobacter sp. ADP1]
Length = 292
Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 12/268 (4%)
Query: 7 PCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K I IFDSGIGGL + Q++ +P +Y AD PYG DH +++
Sbjct: 13 PMPKATADAPIGIFDSGIGGLSIAQEIANYLPNEQIVYYADTAFVPYGPRPDHEIRQLTA 72
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLIS 124
+ L + ++V+ACNTA D LR + S +G VPA+K A +QS +++
Sbjct: 73 RGI-EWLYRQGCKMAVVACNTASAFSLDGLREHYGESFPIVGLVPALKPAVLQSQSKVVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+TPAT R ++I+ + S + V+ + L +E + D +++
Sbjct: 132 VLATPATFRGQLIKDVIYHFALPSGVQVLPVTCLELVPLIEAGQQMSQPCLDLLRQI--- 188
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYP + L + +D+ +AR+ +L +
Sbjct: 189 -LTPVIDQGADYLVLGCTHYPFLKDAIHYLFGNRLTLIDSGAPVARQTARILIKHQLLCE 247
Query: 243 RVFDDH---ALFLSGKPDIAMRRLMQGF 267
+ H A ++SG+ A +++Q
Sbjct: 248 KKRTGHLRIACYVSGQEVEASGKVIQHL 275
>gi|300725872|ref|ZP_07059336.1| glutamate racemase [Prevotella bryantii B14]
gi|299776860|gb|EFI73406.1| glutamate racemase [Prevotella bryantii B14]
Length = 280
Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 99/258 (38%), Gaps = 11/258 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + +
Sbjct: 5 PQRPGPIGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYGIRSFDVVYQFTRQAVL 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123
+ + L ++ CNTA ++ PS LG + P + T S +
Sbjct: 65 KMF-QMGCQLVILGCNTASAKALRSIQQRDLPELDPSRRVLGVIRPTAEIIGNLTSSRHV 123
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T++ I + V+ VE + +KK ++
Sbjct: 124 GLLATEGTIKSQSYDIEIKKLFPDIQVSGVACPFWVPLVEYNEMDSPGADYFVKKRVDE- 182
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQ 241
+ + K D I+L CTH+PL++ + + + + +A + L R H+
Sbjct: 183 -LMLKDKDIDAIILGCTHFPLLMPKIIKYVSPSIRIISQGEYVADSLKAYLERHPEMEHK 241
Query: 242 TRVFDDHALFLSGKPDIA 259
+ + D
Sbjct: 242 CTKGGSCHYYTTENADKF 259
>gi|76818560|ref|YP_337086.1| glutamate racemase [Burkholderia pseudomallei 1710b]
gi|254187190|ref|ZP_04893704.1| glutamate racemase [Burkholderia pseudomallei Pasteur 52237]
gi|76583033|gb|ABA52507.1| glutamate racemase [Burkholderia pseudomallei 1710b]
gi|157934872|gb|EDO90542.1| glutamate racemase [Burkholderia pseudomallei Pasteur 52237]
Length = 290
Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSPAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + ++ + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|299771738|ref|YP_003733764.1| glutamate racemase [Acinetobacter sp. DR1]
gi|298701826|gb|ADI92391.1| glutamate racemase [Acinetobacter sp. DR1]
Length = 288
Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 12/269 (4%)
Query: 4 DNYPCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
D P K I IFDSGIGG+ V ++ +P +Y AD PYG D +++
Sbjct: 10 DLEPMPKASADAPIGIFDSGIGGMSVAAEIARYLPNERIVYYADTAYVPYGPRSDEEIRE 69
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSG 121
D L + ++V+ACNTA D LR + +G VPA+K A T+S
Sbjct: 70 LTARAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSK 128
Query: 122 LISILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
++++L+TPAT R +++ + + + ++S+ L VE + +K+
Sbjct: 129 VVAVLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMGEACLTALKEV 188
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
++ + D +VL CTHYP + L +D+ ++AR+ +L +
Sbjct: 189 LQ----PAAEQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGFAVARQTARILIKNAL 244
Query: 240 HQTRVFDDHA---LFLSGKPDIAMRRLMQ 265
++ + A ++SG A++ ++Q
Sbjct: 245 LCDQIGQNVARIECYVSGNNADALQPVLQ 273
>gi|161506994|ref|YP_001576948.1| glutamate racemase [Lactobacillus helveticus DPC 4571]
gi|260102884|ref|ZP_05753121.1| glutamate racemase [Lactobacillus helveticus DSM 20075]
gi|172048195|sp|A8YTR6|MURI_LACH4 RecName: Full=Glutamate racemase
gi|160347983|gb|ABX26657.1| Glutamate racemase [Lactobacillus helveticus DPC 4571]
gi|260083308|gb|EEW67428.1| glutamate racemase [Lactobacillus helveticus DSM 20075]
Length = 267
Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 15/267 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GG V++K+ +P +++ D PYG+ + +
Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVKKVIEKLPHESTVFIGDSANMPYGDKSREQIIE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L K L + ACNTA + L++ AA T++
Sbjct: 53 LTRRSVKFLLQKK-VKLIIFACNTATAVAMPTLQNEVEQQIIGVIQSGSLAAARTTKNKK 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+++ +TP T+ I + V++ LA +E D ++
Sbjct: 112 VAVAATPVTINSHAYQKEIKFRDPDIKVMEVAAPELAPLIESQK-----DYDTNLAAVKR 166
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ + D VL CTHYPLI + F + + +D +D +A+ ++ R +
Sbjct: 167 SIAPLKDQDFDTFVLGCTHYPLIQNEFVEALGDKIQIVDPADQVAQYTFNVMRRDGLFSS 226
Query: 243 -RVFDDHALFLSGKPDIAMRRLMQGFG 268
H + +G PD + G
Sbjct: 227 FDQAGKHEYYTTGDPDKFSEMGRRFLG 253
>gi|317504610|ref|ZP_07962579.1| glutamate racemase [Prevotella salivae DSM 15606]
gi|315664281|gb|EFV03979.1| glutamate racemase [Prevotella salivae DSM 15606]
Length = 278
Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 11/258 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + + + +
Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQAVMKLFE 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ CNTA ++ PS LG + P + TQ+ + +L+
Sbjct: 69 -LGCHLVILGCNTASAKALRSIQQNDLPNITPSRRVLGVIRPTAEVIGTLTQNNHVGLLA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ I + + V+ VE + +KK I+ + +
Sbjct: 128 TEGTVKSHSYELEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRIDD--LMR 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVF 245
D I+L CTHYP+++ + V + + +A + L R Q
Sbjct: 186 RDPAIDTIILGCTHYPILMPKIVKYVAPGVRIIPQGEYVAGSLQSYLSRHLDIEQQITQG 245
Query: 246 DDHALFLSGKPDIAMRRL 263
+ P+ +
Sbjct: 246 GSCRYLTTENPERFKESV 263
>gi|149369705|ref|ZP_01889557.1| glutamate racemase [unidentified eubacterium SCB49]
gi|149357132|gb|EDM45687.1| glutamate racemase [unidentified eubacterium SCB49]
Length = 263
Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 6/251 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
NSI +FDSG+GG + +++ L+P + +Y+AD + PYGN + + +L+
Sbjct: 5 NSIGLFDSGVGGTSIWKEINALLPFENTLYLADSLNAPYGNKTRDEIIHLSIKNTEFLLN 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K + V+ACNTA T + LR + + +G PA+K AA T++ I IL+T TL
Sbjct: 65 K-NCKMIVVACNTATTNAINILREKY-DIPIIGIEPAMKPAALQTKTKSIGILATKGTLS 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + L +E+ KI E+ + + D
Sbjct: 123 SNLFHKTAAKFTKDISVIEIIGEGLVPLIEQG----KIHTPELTELLFKYTEPMVAASID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL C+HYP ++ + P + +D+ ++AR+ R +L T FL+
Sbjct: 179 HLVLGCSHYPYLIPKLLTILPDNITIIDSGAAVARQTRSVLENNGILNTLEEKPTLQFLT 238
Query: 254 GKPDIAMRRLM 264
++ L+
Sbjct: 239 NSDSATLKMLL 249
>gi|126663124|ref|ZP_01734122.1| glutamate racemase [Flavobacteria bacterium BAL38]
gi|126624782|gb|EAZ95472.1| glutamate racemase [Flavobacteria bacterium BAL38]
Length = 259
Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats.
Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 8/252 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+N I +FDSGIGG + +++ L+P + IY+AD PYG + +++L
Sbjct: 4 ENPIGLFDSGIGGTSIWKEVHSLLPNENTIYLADSKNAPYGLKSKEEIIALSSKN-TELL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ ++ACNTA T ELR+ + + F+G PAIK AA +++ I IL+T TL
Sbjct: 63 LNLNCKIIIVACNTATTNAIKELRAKY-DVPFIGIEPAIKPAAIQSKTQKIGILATKGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + I L +E I E++ ++ K
Sbjct: 122 NSELFHISAANH-PEVKIIEQIGHGLVQLIENG----DIDSAEMEDLLKSYLNPMIEKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL C+HYP ++ +++ P + +D+ +++A++ + +L + T + +
Sbjct: 177 DFLVLGCSHYPYLIPQIKKIIPAKIRIIDSGEAVAKQTQNILEQNFLINTSKNKSSQIFY 236
Query: 252 LSGKPDIAMRRL 263
+ +P++ L
Sbjct: 237 TNSEPEVLKSIL 248
>gi|255012458|ref|ZP_05284584.1| glutamate racemase [Bacteroides sp. 2_1_7]
Length = 276
Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 97/263 (36%), Gaps = 11/263 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S
Sbjct: 3 PQAPGPIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVS 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123
+ + L ++ACNTA ++ P+ LG + P ++ +++ I
Sbjct: 63 RLFESG-CQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHI 121
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
I+ T T+ + I + + + VE + +KK I+
Sbjct: 122 GIVGTSGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHI 181
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ D ++L CTHYPL++ R P + + +A R L R +
Sbjct: 182 LS--VDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRK 239
Query: 244 VF--DDHALFLSGKPDIAMRRLM 264
+ + +
Sbjct: 240 LTKGGSCRFLTTESAEKFSEAAS 262
>gi|126442693|ref|YP_001061621.1| glutamate racemase [Burkholderia pseudomallei 668]
gi|126222184|gb|ABN85689.1| glutamate racemase [Burkholderia pseudomallei 668]
Length = 290
Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + ++ + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|325124352|gb|ADY83875.1| glutamate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 288
Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 12/266 (4%)
Query: 7 PCEKK-LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P K I IFDSGIGG+ V ++ +P +Y AD PYG D +++
Sbjct: 13 PMPKASADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTA 72
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLIS 124
D L + ++V+ACNTA D LR + +G VPA+K A T+S +++
Sbjct: 73 RAV-DWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVA 131
Query: 125 ILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+TPAT R +++ + + + ++S+ L VE + K ++
Sbjct: 132 VLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMG----EACLKALKE 187
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYP + L +D+ ++AR+ +L +
Sbjct: 188 VLQPAAEQGADYLVLGCTHYPFLNQAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCD 247
Query: 243 RVFDDHA---LFLSGKPDIAMRRLMQ 265
++ + A ++SG ++ ++Q
Sbjct: 248 QIGQNVARIECYVSGNNAEVLQPVLQ 273
>gi|331695366|ref|YP_004331605.1| glutamate racemase [Pseudonocardia dioxanivorans CB1190]
gi|326950055|gb|AEA23752.1| Glutamate racemase [Pseudonocardia dioxanivorans CB1190]
Length = 275
Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 11/263 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + +P +YV D PYG +++ + +
Sbjct: 3 DPDRDAPIGIFDSGVGGLTVARAVIDQLPAERIVYVGDTEHGPYGPLRIPEIRRHALAIG 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+++++ L VIACNTA + R +P +PA+++A A T++G I ++ T
Sbjct: 63 DELIERG-VKLLVIACNTASAACLADARERYPVPVVEVVLPAVRRAVAATRNGRIGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ ++ + + V+ VE + +I + +
Sbjct: 122 SATITSGAYADAFSA-ARDVSVTSVACPRFVDFVERGVTSGR----QILGIAQSYLEPLQ 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-- 246
R D +VL CTHYPL+ + + + V + ++D A+ L + + D
Sbjct: 177 RARVDTVVLGCTHYPLLSGLLQIVLGPEVTLVSSADETAKDVVRTLMAADLLRDPETDPP 236
Query: 247 --DHALFLSGKPDIAMRRLMQGF 267
H +G P+ RRL + F
Sbjct: 237 PGPHEFLATGDPEPF-RRLGRRF 258
>gi|260579687|ref|ZP_05847548.1| glutamate racemase [Corynebacterium jeikeium ATCC 43734]
gi|258602179|gb|EEW15495.1| glutamate racemase [Corynebacterium jeikeium ATCC 43734]
Length = 288
Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 9/264 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E+ I +FDSG+GGL V + + +P + +Y+ D PYG+ +++ + +
Sbjct: 17 VEQANNAPIGVFDSGVGGLTVARAIVDQLPHENLVYIGDTANSPYGDKPLARVRELSIGI 76
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++ + V+ACN+A + + R + +PA+++AAA T++G I ++
Sbjct: 77 ADTLAERG-CKMIVVACNSASSAFIRDARERYSIPVVEVILPAVRRAAAATRNGKIGVIG 135
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +L + + + VE + ++ E
Sbjct: 136 TQATVSSRSYQDLFAAI-PGVEAYAQACPQFVPFVERGMTSGR----QLMGLAENYLAPL 190
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD- 246
+ + D +VL CTHYPL+ V + + V +++++ A+ L +
Sbjct: 191 KAEGVDTVVLGCTHYPLLAGVVQLVMGEDVTLINSAEETAKTVYRTLAEQDLLADEDPGR 250
Query: 247 --DHALFLSGKPDIAMRRLMQGFG 268
D + +G P + + G
Sbjct: 251 AVDLSFESTGDPQRFAKLAGRFLG 274
>gi|323144068|ref|ZP_08078711.1| glutamate racemase [Succinatimonas hippei YIT 12066]
gi|322416144|gb|EFY06835.1| glutamate racemase [Succinatimonas hippei YIT 12066]
Length = 267
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 78/259 (30%), Positives = 132/259 (50%), Gaps = 7/259 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L FDSG+GG V ++ L P + Y+ D+ FPYGN ++ + KR + + + ++
Sbjct: 4 VLFFDSGLGGTSVFSAVKELNPNCSYYYLFDNECFPYGNKDEAFIIKRTDEILEESVRRF 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L ++ACNTA T+ +LR + +G VPAIK AA ++S +I +++TP T+RR
Sbjct: 64 SVSLIIVACNTASTVALPKLRDRIK-IPIVGVVPAIKPAAIKSKSKIIGLVATPGTIRRA 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT++LI + C + + + L E G + E+ + + K +R D I
Sbjct: 123 YTNDLIEKFAKDCKVLKIGTTDLVRLCERKMAGKPVTLTEVAEVFGPWLMLKPEERPDSI 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDDHALFLS 253
VL CTH+PL+ L P V +D+ ++I RR R L L + +++ +HA + +
Sbjct: 183 VLGCTHFPLVKDEIGTLFPDAV-LVDSGEAIGRRVRSLISLNQAPSYEEISDGNHAFY-T 240
Query: 254 GKPD--IAMRRLMQGFGLK 270
G + + G K
Sbjct: 241 GNLENLSGYENAFKSLGFK 259
>gi|254185304|ref|ZP_04891892.1| glutamate racemase [Burkholderia pseudomallei 1655]
gi|184209539|gb|EDU06582.1| glutamate racemase [Burkholderia pseudomallei 1655]
Length = 290
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + ++ + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGRGLVEAIERGDTG----SPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|194334596|ref|YP_002016456.1| glutamate racemase [Prosthecochloris aestuarii DSM 271]
gi|229486246|sp|B4S417|MURI_PROA2 RecName: Full=Glutamate racemase
gi|194312414|gb|ACF46809.1| glutamate racemase [Prosthecochloris aestuarii DSM 271]
Length = 269
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 7/250 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ + IFDSGIGGL V++ M+ ++P IY D PYG+ ++K ++
Sbjct: 5 ESPVGIFDSGIGGLTVVRAMQAMLPAEQIIYFGDTARVPYGSKSQVTIRKYAHEDTLTLM 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
KYQP + +IACNT L D + ST + LG + A + A T +G I ++ T AT
Sbjct: 65 -KYQPKMIIIACNTVSALGLDVVESTGKGVTVLGVLKAGAELAVRETLNGRIGVIGTQAT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I + + + + + EE K E E
Sbjct: 124 ICSNAYACEITALAPEIQVFSKACPLFVPLAEEGFINHPAS----KLIAEEYLDELLCCN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTHYP++ + ++++ + +D+++++A AR LL T L
Sbjct: 180 IDTLVLGCTHYPILKTMIQEITGPDIRIIDSAEAVAAGARTLLADNALLNTATTTRTPHL 239
Query: 251 FLSGKPDIAM 260
+S P
Sbjct: 240 LVSDLPQKFQ 249
>gi|298370218|ref|ZP_06981534.1| glutamate racemase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281678|gb|EFI23167.1| glutamate racemase [Neisseria sp. oral taxon 014 str. F0314]
Length = 269
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 8/263 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
Q I +FDSG+GGL ++ + +P + +Y D PYG ++ + +
Sbjct: 1 MSTSKQRPIGVFDSGVGGLTNVRALMERLPMENIVYFGDTARVPYGTKSRATIETFALQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126
+L++ +IACNT + ++R +M L + A + A + T++ I I+
Sbjct: 61 VDFLLEQ-DVKALIIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALSTTRNNRIGII 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ + IHS + ++ +L VEE ++ ++ ++ ++
Sbjct: 120 ATNTTVNSNAYARAIHSRNPDTLVRTQAAALLVPLVEEGWLDHEVTRLTAREYLKPLLVD 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVF 245
D +VL CTH+PL+ + RQ +P V +D++ + A A L + T
Sbjct: 180 ----NIDTLVLGCTHFPLLKPLIRQEAP-DVTLVDSAITTAEAAAKALAQAGLLNTDNPE 234
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
D+ ++S P + G
Sbjct: 235 PDYRFYVSDIPLRFRTIGERFLG 257
>gi|288928934|ref|ZP_06422780.1| glutamate racemase [Prevotella sp. oral taxon 317 str. F0108]
gi|288329918|gb|EFC68503.1| glutamate racemase [Prevotella sp. oral taxon 317 str. F0108]
Length = 279
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 14/267 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++N+P + I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + +
Sbjct: 1 MNNFPQQA---GPIGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYGPRSFDVVYQ 57
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRST-FPSM----AFLGAV-PAIKQAAA 116
+ ++ L +I CNTA ++ PS+ LG + P + +
Sbjct: 58 FTRQAVVKLFEQG-CHLIIIGCNTASAKALRSIQQRDLPSLDAKRRVLGIIRPTAESIGS 116
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T + + IL+T T++ I + ++ + A+ VE + +
Sbjct: 117 LTSTRHVGILATEGTIKSDSYRLEIQKLFPDIVVQGMACPLWAAIVEANEADSPGADYFV 176
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
KK I+ + + D IVL CTHYPL+++ + P V + + +A + L R
Sbjct: 177 KKRIDSLL--RTDPQIDAIVLGCTHYPLLMNSIVKHVPPGVRIVPQGEYVANSLQQYLQR 234
Query: 237 INTHQT--RVFDDHALFLSGKPDIAMR 261
+ D
Sbjct: 235 HPEIDALCTKHGTARYLTTENKDKFKE 261
>gi|254264436|ref|ZP_04955301.1| glutamate racemase [Burkholderia pseudomallei 1710a]
gi|254215438|gb|EET04823.1| glutamate racemase [Burkholderia pseudomallei 1710a]
Length = 302
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 13 MTTPYAPDSPAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 72
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + ++ + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 73 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 130
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 131 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 186
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 187 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 246
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 247 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 282
>gi|256839107|ref|ZP_05544617.1| glutamate racemase [Parabacteroides sp. D13]
gi|262382441|ref|ZP_06075578.1| glutamate racemase [Bacteroides sp. 2_1_33B]
gi|256740026|gb|EEU53350.1| glutamate racemase [Parabacteroides sp. D13]
gi|262295319|gb|EEY83250.1| glutamate racemase [Bacteroides sp. 2_1_33B]
Length = 276
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 96/259 (37%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S + +
Sbjct: 7 GPIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSRLFE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA ++ P+ LG + P ++ +++ I I+
Sbjct: 67 SG-CQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVG 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + I + + + VE + +KK I+
Sbjct: 126 TSGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHILS-- 183
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245
+ D ++L CTHYPL++ R P + + +A R L R ++
Sbjct: 184 VDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRKLTKG 243
Query: 246 DDHALFLSGKPDIAMRRLM 264
+ +
Sbjct: 244 GSCRFLTTESAEKFSEAAS 262
>gi|313205149|ref|YP_004043806.1| glutamate racemase [Paludibacter propionicigenes WB4]
gi|312444465|gb|ADQ80821.1| glutamate racemase [Paludibacter propionicigenes WB4]
Length = 282
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 11/259 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I IFDSG GGL +L+K+R +PEY +IY+ D+ PYG + K + +
Sbjct: 8 PEAPGPIGIFDSGYGGLTILEKIRTELPEYDYIYLGDNARTPYGTRSFDVVYKFTLECVT 67
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123
+ + L V+ACNTA ++ + LG + P ++ A T+S I
Sbjct: 68 KLFE-MGCQLVVLACNTASAKALRSIQQRDLPLLDANRRVLGVIRPTVEAVGAMTRSKHI 126
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T++ IH + + + +E + + ++K +E
Sbjct: 127 GLLATSGTVQSNSYPLEIHKLHDDIVVTSEACPMWVPLIENNEHKSEGADYFVRKNVEHL 186
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ D I+L CTHYPL+ + L P + + + +A+ L R ++R
Sbjct: 187 LAA--DPKIDTIMLGCTHYPLLEDKIKSLLPKEISVVSQGEIVAKSLADYLQRHTEMESR 244
Query: 244 VFDD--HALFLSGKPDIAM 260
+ F + +
Sbjct: 245 CTKNASIRYFSTESVEKFS 263
>gi|332881250|ref|ZP_08448900.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332680626|gb|EGJ53573.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 281
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 102/257 (39%), Gaps = 12/257 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L ++R LMP+Y ++Y+ D+ PYG + + + D
Sbjct: 10 GPIGVFDSGYGGLTILHEIRQLMPQYDYLYLGDNARTPYGTRSFEVVYEFTREAVQKLFD 69
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-FPSM-----AFLGAV-PAIKQAAAYTQSGLISIL 126
L ++ACNTA ++ P M LG + P + T S + IL
Sbjct: 70 -LGCHLVILACNTASAKALKTIQQNDLPQMEGETRRVLGVIRPTAECIGQITHSRHVGIL 128
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ I + + + VE Y + ++K I
Sbjct: 129 ATSGTISSGSYPLEIRKLYPDIVVSGEACPMWVPLVENYEYDSPGADYFVEKRIGNLL-- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RV 244
++ D I+L CTHYPL+++ + +P V + + +A + L R +T
Sbjct: 187 RKDPAIDTIILGCTHYPLLLNKILKYTPRNVRIVPQGEYVAYSLKDYLQRHTEIETLCTQ 246
Query: 245 FDDHALFLSGKPDIAMR 261
+ PD M
Sbjct: 247 SGTCRFLTTESPDKFME 263
>gi|256832123|ref|YP_003160850.1| glutamate racemase [Jonesia denitrificans DSM 20603]
gi|256685654|gb|ACV08547.1| glutamate racemase [Jonesia denitrificans DSM 20603]
Length = 268
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 102/262 (38%), Gaps = 12/262 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL V + + +P Y+ D PYG +++ + + ++
Sbjct: 3 DSPIGIFDSGVGGLTVARSILDQLPGESITYIGDTANTPYGPKPLALVRELALTIMDRLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAV-PAIKQAAAYTQSGLISILST 128
D + VIACNTA + + R + + + + PA ++A A T++G I ++ T
Sbjct: 63 D-DGVKMLVIACNTASAAVLRDARERYTVGRGIPVVEVILPAARRAVAATRTGKIGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + S + + V+ VE + + +
Sbjct: 122 QATVASRAYDDAL-SVAADLTVSSVACPDFVELVEAGIT----TGPRVIEAATRYLDSLK 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FD 246
D ++L CTHYPL+ + V + +++ A+ L ++
Sbjct: 177 HHDVDTLILGCTHYPLLTGAISYVMGEDVTLVSSAEETAKDVYRTLVAHGLERSPEAGPP 236
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
H F +G + G
Sbjct: 237 RHQFFATGDTHAFHVLARRFLG 258
>gi|330996365|ref|ZP_08320248.1| glutamate racemase [Paraprevotella xylaniphila YIT 11841]
gi|329573223|gb|EGG54837.1| glutamate racemase [Paraprevotella xylaniphila YIT 11841]
Length = 281
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 101/257 (39%), Gaps = 12/257 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L ++R LMP+Y ++Y+ D+ PYG + + + D
Sbjct: 10 GPIGVFDSGYGGLTILHEIRQLMPQYDYLYLGDNARTPYGTRSFEVVYEFTREAVQKLFD 69
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-FPSM-----AFLGAV-PAIKQAAAYTQSGLISIL 126
L ++ACNTA ++ P M LG + P + T S + IL
Sbjct: 70 -LGCHLVILACNTASAKALKTIQQNDLPKMEGETRRVLGVIRPTAECIGQITHSRHVGIL 128
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ I + + + VE Y + ++K I
Sbjct: 129 ATSGTISSGSYPLEIRKLYPDIAVSGEACPMWVPLVENYEYDSPGADYFVEKRIGNLL-- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RV 244
++ D I+L CTHYPL+++ + +P V + + +A + L R +T
Sbjct: 187 RKDPAIDTIILGCTHYPLLLNKILKYTPRNVRIVPQGEYVAYSLKDYLQRHTEIETLCTQ 246
Query: 245 FDDHALFLSGKPDIAMR 261
+ PD
Sbjct: 247 SGTCRFLTTESPDKFTE 263
>gi|126667191|ref|ZP_01738165.1| glutamate racemase [Marinobacter sp. ELB17]
gi|126628347|gb|EAZ98970.1| glutamate racemase [Marinobacter sp. ELB17]
Length = 280
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 84/254 (33%), Positives = 128/254 (50%), Gaps = 10/254 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
S+L+FDSG+GGL V +R P +Y+AD+ GFPYG+ + + +R L + L
Sbjct: 7 PSVLVFDSGVGGLSVAASIRRRCPHLPLVYLADNAGFPYGDKPEEEVTRRTCNLVTSALS 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ + V+ACNTA T+ LR A +G VPAIK AAA + + I IL+TPAT+
Sbjct: 67 QFDCQIVVLACNTASTVALPALRQCVSE-AVVGVVPAIKPAAAISVNRRIGILATPATVA 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R+Y LI Y + C + + L E A G + + + + E D
Sbjct: 126 RSYLDQLIADYAADCQVSRIGHPSLVHWAEGLARGEPVP----QSRLAEILVPFELAGVD 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYPL++ +Q +P W+D+ D+IARR LL + + Q +
Sbjct: 182 TVVLGCTHYPLLLPALKQAAPGVRFWVDSGDAIARRVEQLLAFLKSAQPQALTSRL---- 237
Query: 254 GKPDIAMRRLMQGF 267
+P + + L Q
Sbjct: 238 -QPGMPPKPLQQAL 250
>gi|90407369|ref|ZP_01215554.1| glutamate racemase [Psychromonas sp. CNPT3]
gi|90311520|gb|EAS39620.1| glutamate racemase [Psychromonas sp. CNPT3]
Length = 271
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 81/239 (33%), Positives = 126/239 (52%), Gaps = 5/239 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
ILIFDSG+GGL + +++R + Y++D+ FPYG L +RL+ L +D K+
Sbjct: 6 ILIFDSGVGGLSIFEEIRKKNSKLSCYYLSDNAYFPYGELTKEVLTQRLLCLLTDFTKKH 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA T+ LR F S+ +G VPAIK A T++ +I +++TPAT+ R
Sbjct: 66 PVDLIVIACNTASTIALKTLREHF-SIPIVGVVPAIKPACQLTKNNIIGLIATPATITRE 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEGKRTD 193
YTS LI + ++ + ++S L E + I ++K++ F E +R D
Sbjct: 125 YTSLLIDEFATKKQVLTLASTALVKLAERKLSALPIDNMMLQKQLSDIFKEWLMLARRPD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
IVL CTH+PL+ + +D+ +IA+R + LLP + HA +
Sbjct: 185 TIVLGCTHFPLLKADIELCFGGNIQLVDSGGAIAKRVQKLLPVQ--CSIGMPQHHAFYT 241
>gi|313887367|ref|ZP_07821057.1| glutamate racemase [Porphyromonas asaccharolytica PR426713P-I]
gi|312923135|gb|EFR33954.1| glutamate racemase [Porphyromonas asaccharolytica PR426713P-I]
Length = 281
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 112/264 (42%), Gaps = 14/264 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++++ I +FDSG GGL +L+K++ +P+Y F+Y+ D+ PYG+ + +
Sbjct: 1 MQQIEGPIGVFDSGYGGLTILRKLQEQLPQYDFVYLGDNARSPYGSRSMRVVYQFTREAV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRST-FPSM-------AFLGAV-PAIKQAAAYTQ 119
+ D P L ++ACNTA +++ P + LG + P ++ T
Sbjct: 61 ERLFDLGCP-LVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTS 119
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + IL+T T+ IH + + + VE + ++K
Sbjct: 120 TKHVGILATEGTVSSESYVTEIHKLYPDVTVVQEACPLWVPIVETGESDSPGADFFVRKH 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+E + ++ D I+L CTHYP+++ ++L + + + +A+ L R
Sbjct: 180 LERLLA--QDEKIDTIILGCTHYPILMPKIQRLLTPSIKVVAQGELVAKSLEEYLVRHPE 237
Query: 240 HQTRVF--DDHALFLSGKPDIAMR 261
++ + + + + R
Sbjct: 238 MAAQLTRGGTTRYYTTEQTERFSR 261
>gi|296132631|ref|YP_003639878.1| glutamate racemase [Thermincola sp. JR]
gi|296031209|gb|ADG81977.1| glutamate racemase [Thermincola potens JR]
Length = 270
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GG+ VL+ M L+P FIY AD + PYG ++ + + + ++
Sbjct: 7 DRPIGIFDSGVGGISVLKDMVQLLPNEKFIYYADSLNAPYGTKDNETIARLSRNVARFLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK V+ACNTA + ++LR+ + +G PA+K A + G + +++TP TL
Sbjct: 67 DKG-IKTLVVACNTATAVAINQLRAEL-DIPVIGMEPAVKPAVELGKEGKVLVMATPVTL 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + L+H Y + + L VE+ K EIK+ + + +
Sbjct: 125 KQEKFNKLLHRYDEHSRVIPLPCPGLVELVEKGITQGK----EIKEYLSKLLANIQRDQI 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--- 249
V+VL CTHY + +Q P + +D + A+R +L +
Sbjct: 181 AVVVLGCTHYVFVRDTIKQFFPSQIPVIDGNCGTAKRLLKVLEDAGLRAPEKKGEKEIGM 240
Query: 250 --------LFLSGKP 256
+ SG P
Sbjct: 241 QVRKMAVKFYTSGDP 255
>gi|228932265|ref|ZP_04095149.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228827390|gb|EEM73140.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 265
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 50/254 (19%), Positives = 100/254 (39%), Gaps = 7/254 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT S+ +G + P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNT-AAAAALAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+H + +H + LA+ VE + ++++ + + D ++
Sbjct: 119 YEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKEDIDTLI 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSV 234
Query: 257 DIAMRRLMQGFGLK 270
+ G +
Sbjct: 235 SSFEHIAERWLGYQ 248
>gi|332669874|ref|YP_004452882.1| glutamate racemase [Cellulomonas fimi ATCC 484]
gi|332338912|gb|AEE45495.1| glutamate racemase [Cellulomonas fimi ATCC 484]
Length = 271
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 13/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +Y+ D + PYG A++ + + D++
Sbjct: 3 DAPIGIFDSGVGGLTVARSVLDQLPHESTLYIGDTLNTPYGPKPLAAVRAHALEVMDDLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILST 128
D L VIACNTA + + R + + + + PA ++A A T++G I ++ T
Sbjct: 63 DAG-VKLLVIACNTASAAVLRDARERYTLRRGIPVVEVILPAARRAVAATRTGRIGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + + VE E+
Sbjct: 122 RATVDSRAYDDAF-AVAPGVTLTSQACPRFVELVEAGVTSGP----EVLAVAHEYLDPVR 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--D 246
D +VL CTHYPL+ V + V + +S+ A+ L +
Sbjct: 177 DAGVDTLVLGCTHYPLLTGVISYVMGDDVTLVSSSEETAKDVYRTLVGHGIERDPAADLP 236
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
H +G P +A + L + F
Sbjct: 237 THRFLATGDP-VAFQTLARRF 256
>gi|283782931|ref|YP_003373685.1| glutamate racemase [Gardnerella vaginalis 409-05]
gi|283441996|gb|ADB14462.1| glutamate racemase [Gardnerella vaginalis 409-05]
Length = 256
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I +FDSG+GG+ V +++ +P IY D PYG +KK + +
Sbjct: 4 SAAIGVFDSGLGGISVARQLHAALPHERIIYFGDSANAPYGIKTPEEVKKLSFAIVEHFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPA 130
+ VIACNTA + ++LR+ + ++ +G PA+K A + + + +TP
Sbjct: 64 -RLNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGEPQRVIVAATPL 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR ++L+ + I L VE D + + F E +
Sbjct: 122 TLRERKFADLLQRFSQNNTIFSQPCPDLVRIVERGELN---NRDVVFAALHKYFDEYDLD 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+ FR+ P + +D ++ R +L N + +
Sbjct: 179 SIDSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKILELNNELASDSQEGSIT 238
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + M++L +
Sbjct: 239 LTNSDTSLRMQQLAKSL 255
>gi|113461596|ref|YP_719665.1| glutamate racemase [Haemophilus somnus 129PT]
gi|123132293|sp|Q0I5M2|MURI_HAES1 RecName: Full=Glutamate racemase
gi|112823639|gb|ABI25728.1| glutamate racemase [Haemophilus somnus 129PT]
Length = 267
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 127/241 (52%), Gaps = 4/241 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +IL FDSG+GGL V ++ + L+P+ H++Y D+ FPY ++ + R + + I
Sbjct: 5 IQPTILFFDSGVGGLSVYKETKQLLPDCHYLYCFDNGFFPYSEKDEKDIIDRTLRICQKI 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L VIACNTA T++ ELR F S+ +G VPAIK AA +++ I +++T T
Sbjct: 65 NQAYPLDLIVIACNTASTVVLPELRRNF-SIPIVGTVPAIKPAAEMSETKHIGLIATKGT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++RTY ++LI +Y C + + S L E+ G ++ + +K+E+ + K
Sbjct: 124 IKRTYVNDLIKNYAHHCMVEKIGSTKLVEIAEQKLRGGEVDLNVLKQELSPW---QTMKS 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PLI P ++ + +IA+R + LL I +
Sbjct: 181 LDSVVLGCTHFPLIKEEIECCLPQVKFFVSSGKAIAKRVKFLLKGIEVRSKIQKKNLIFC 240
Query: 252 L 252
Sbjct: 241 T 241
>gi|313115114|ref|ZP_07800601.1| glutamate racemase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310622554|gb|EFQ06022.1| glutamate racemase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 275
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 102/262 (38%), Gaps = 12/262 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I +FDSG+GGL ++++R +P IY D PYG+ + +
Sbjct: 1 MDNRP--------IGVFDSGLGGLTGVRELRKRLPHEEIIYFGDTGRVPYGSRSPETILQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ +L K + AC T + + P A ++AA T++
Sbjct: 53 YARQDVAFLLSK-NVKCIMAACGTVSSTYPAAEAAKLPVPYLGVVDAAAREAAFATRNRR 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY--ACGIKIKEDEIKKEI 180
I ++ T AT+R L+ V I + + VE + ++ K I
Sbjct: 112 IGVIGTAATIRSRSYEKLLRQLVPGVEITAQACPLFVPLVEAGYVDHSEESRQQVTKLVI 171
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E D ++L CTHYPL+ + + V +D + + A +L
Sbjct: 172 AQYLTEVREAGVDTLILGCTHYPLLKTMIGEFMGQSVTLVDPAKTAAHHLEQMLSERGLK 231
Query: 241 QTRVFDDHA-LFLSGKPDIAMR 261
+ + A ++S PD ++
Sbjct: 232 AAQEHEGQAHFYVSDVPDSFVQ 253
>gi|253583512|ref|ZP_04860710.1| glutamate racemase [Fusobacterium varium ATCC 27725]
gi|251834084|gb|EES62647.1| glutamate racemase [Fusobacterium varium ATCC 27725]
Length = 263
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 60/262 (22%), Positives = 104/262 (39%), Gaps = 11/262 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K +I +FDSG+GG VL+++ L+P + IY D+ PYG ++ + +
Sbjct: 2 KKNYNIGVFDSGVGGTTVLKRIIELLPNENIIYYGDNGNAPYGEKTTKEIQGFCLDIMDF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+ VIACNTA D ++ + ++ +G + P K A + + I +LSTP
Sbjct: 62 FMM-NNCKAVVIACNTATAASLDLIKGRY-TVPVIGVISPGAKSAVETSTNKCIGVLSTP 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T ++ I Y ++ L +E + +E IK I K
Sbjct: 120 FTAASNAYADEIAKYSKTAKVYQEGCPELCPMIEAGWETFEDRETIIKNHI-----SKFP 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDH 248
+ D +VL CTHYP+ + +D + + L + +
Sbjct: 175 RNVDTVVLGCTHYPIAREDIAKNFCGN--IVDPAKETSIALYNTLKNSDLLSDSDAKGKI 232
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
F+SG + + Q G +
Sbjct: 233 DFFVSGDKEKFKKVAEQFLGFE 254
>gi|296162473|ref|ZP_06845264.1| glutamate racemase [Burkholderia sp. Ch1-1]
gi|295887286|gb|EFG67113.1| glutamate racemase [Burkholderia sp. Ch1-1]
Length = 284
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 9/246 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++
Sbjct: 9 RAPVGIFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLV 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +R P + +G P IK AA +++ + +L+T TL
Sbjct: 69 KQGAKAL-VVACNTATAQSIAMVREKLP-IPLVGVEPGIKPAALQSKTRVAGVLATQVTL 126
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE I E+ + G
Sbjct: 127 RSARFQALLERYAADCRFLCQPGHGLVQAVER----CDISSAELHALLRGYLQPMLDAGA 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--- 249
D +VL CTHYP + R + + +D S +IAR+ +L + A
Sbjct: 183 DTLVLGCTHYPFLDTAIRDIVGDRLVLIDTSVAIARQLERVLDQHGLRAAPESGGTALPR 242
Query: 250 LFLSGK 255
+ +G
Sbjct: 243 FYSTGD 248
>gi|194468341|ref|ZP_03074327.1| glutamate racemase [Lactobacillus reuteri 100-23]
gi|194453194|gb|EDX42092.1| glutamate racemase [Lactobacillus reuteri 100-23]
Length = 267
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V++ +R MP+ I+V D FPYG +++ + + +L
Sbjct: 3 KRPIGVMDSGLGGLSVIRVLREQMPQESVIFVGDQGHFPYGTKTKEQIQQLALRIGKFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + +IACNTA L++ P + +G + AA I ++ T +T+
Sbjct: 63 EQ-DVKMMIIACNTATAAALQLLQNELP-IPVIGVIEPGAMAATQHHYKKIGVIGTESTI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + ++ + + L S VE G E +K ++ + K
Sbjct: 121 KNGAYAKILAKLNPTLSVISSPAQPLVSIVEHGQTGT----SEAQKAVDTELEVFDNKSI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ ++L CTH+P + V +D + R+A+ LL N + L+
Sbjct: 177 EALILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTSENQLSDDLTSSIDLYS 236
Query: 253 SGKPDIAMRRLMQGF 267
+G + +
Sbjct: 237 TGDVKDLVAGAQKWL 251
>gi|154488995|ref|ZP_02029844.1| hypothetical protein BIFADO_02305 [Bifidobacterium adolescentis
L2-32]
gi|154083132|gb|EDN82177.1| hypothetical protein BIFADO_02305 [Bifidobacterium adolescentis
L2-32]
Length = 258
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ V +++R MP H +Y D PYG +++ + ++
Sbjct: 5 APIGVFDSGLGGISVAREIRRDMPNEHVLYFGDSANAPYGTKSPEQVRELSDVIVKRFVE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
+ VIACNTA + +ELR T+ + +G PA+K A + + + + +TP T
Sbjct: 65 QG-VKAVVIACNTATSAAANELRDTY-DIPIIGMEPALKVACDRGHGKRQHVIVAATPLT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
LR + L+ + + I L VE D + + + F + +
Sbjct: 123 LRERKFAVLMDRFKADHTIFPEPCPGLVEIVEHGQLD---DHDVVMRTLHQYFDQYDLST 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+ FR+L P +D ++ R +L + +
Sbjct: 180 IDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLAPEDAEGSIDL 239
Query: 252 LSGKPDIAMRRLMQGF 267
+ + +L Q
Sbjct: 240 ANSDTSARIAQLAQSL 255
>gi|1346607|sp|P48797|MURI_LACBR RecName: Full=Glutamate racemase
gi|468450|dbj|BAA06106.1| glutamate racemase [Lactobacillus brevis]
Length = 276
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 103/257 (40%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL VL++++ L+P + +++ D PYG + + +
Sbjct: 3 NDPIGLMDSGVGGLTVLKEVQRLLPTENTVFLGDQARLPYGPRSVAEVTMFTKQIAQFLR 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + VIACNTA ++ T P + +G + P + A T++ I +++T T
Sbjct: 63 QQARIKALVIACNTATAAALTTMQQTLP-IPVIGVIAPGAQAAVQTTRNHRIGVIATAGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I + I V+ + + E+ + + + K+
Sbjct: 122 VKSDQYRRDILAAAPNSQIFSVACPEMVTLAEQN----DLTTTHAQSVVAANLASLMDKK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-L 250
D +V+ CTH+PL+ + V +D + A + +L + A
Sbjct: 178 IDTLVMGCTHFPLLRSAIQHAVGSQVTLVDPGLATAEQTVAILKTRGLLNSATTRGTAQF 237
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G+ D Q
Sbjct: 238 FTTGETDQFDTLASQWL 254
>gi|325268397|ref|ZP_08135029.1| glutamate racemase [Prevotella multiformis DSM 16608]
gi|324989251|gb|EGC21202.1| glutamate racemase [Prevotella multiformis DSM 16608]
Length = 279
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L +R L+PEY +IY+ D+ PYG+ + + +
Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYIYLGDNARAPYGSRSFDIVYQFTRQAVMKLF- 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ CNTA ++ P LG + P + T+S + +L+
Sbjct: 68 GLGCQLVILGCNTASAKALRTIQQNDLPALDPDRRVLGVIRPTAEIIGRLTRSRHVGLLA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+R + I + V + +E + +KK I+ I +
Sbjct: 128 TEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH--IMR 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ D ++L CTHYP+++ + +P V + + +A R L R R
Sbjct: 186 IDPQIDSLILGCTHYPILMPKILKHAPHGVRIIPQGEYVAESLRDYLRRHPDMDARCTKH 245
Query: 246 DDHALFLSGKPDIAMR 261
+ P+
Sbjct: 246 STAKYLTTENPEKFKE 261
>gi|153003580|ref|YP_001377905.1| glutamate racemase [Anaeromyxobacter sp. Fw109-5]
gi|152027153|gb|ABS24921.1| glutamate racemase [Anaeromyxobacter sp. Fw109-5]
Length = 259
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 8/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+ D PYG + + + +L ++
Sbjct: 4 IGIFDSGVGGLTVQRAILEALPSVDTVYLGDTARVPYGTKSADTVTQYSLRNA-RLLARH 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L V+ACNTA + LR+ P + AA ++ G I ++ T T+
Sbjct: 63 EIDLLVVACNTASAVALPALRAELAVPVLGVVEPGARAAARASRGGRIGVIGTQGTVSSG 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + + + + EE + ++ + R D +
Sbjct: 123 AYQSALRAARPDAEVVARACPLFVPLAEEGWTDP--GDPVVRGAVARYLAPLREARIDTL 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYPL+ + P V +D++++IA R R+ + R HA ++
Sbjct: 181 VLGCTHYPLLREAIARELPEVV-LVDSAEAIAAEVRA---RMGEERGRE-GSHAFLVTDA 235
Query: 256 PDIAMRRLMQGFG 268
P+ + + G
Sbjct: 236 PEKFLAVAGRFLG 248
>gi|116333824|ref|YP_795351.1| glutamate racemase [Lactobacillus brevis ATCC 367]
gi|122269489|sp|Q03R52|MURI_LACBA RecName: Full=Glutamate racemase
gi|116099171|gb|ABJ64320.1| Glutamate racemase [Lactobacillus brevis ATCC 367]
Length = 276
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 100/257 (38%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL VL++++ L+P + +++ D PYG + + +
Sbjct: 3 NDPIGLMDSGVGGLTVLKEVQRLLPTENTVFLGDQARLPYGPRSVAEVTMFTKQIAQFLR 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ VIACNTA ++ T P + +G + P + A T++ I +++T T
Sbjct: 63 QQAGIKALVIACNTATAAALTTMQQTLP-IPVIGVIAPGAQAAVQTTRNHRIGVIATAGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I + I V+ + + E+ + + + K+
Sbjct: 122 VKSDQYRRDILAAAPNSQIFSVACPEMVTLAEQN----DLTTTHARSVVAANLASLMDKK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-L 250
D +V+ CTH+PL+ + V +D + A + +L A
Sbjct: 178 IDTLVMGCTHFPLLRSAIQHAVGSQVTLVDPGLATAEQTAAILKTHGLLNPATTRGTAQF 237
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G+ Q
Sbjct: 238 FTTGETAHFDTLASQWL 254
>gi|91787921|ref|YP_548873.1| glutamate racemase [Polaromonas sp. JS666]
gi|91697146|gb|ABE43975.1| glutamate racemase [Polaromonas sp. JS666]
Length = 281
Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 75/273 (27%), Positives = 108/273 (39%), Gaps = 15/273 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I +FDSGIGGL +L+ +R +P +F+YVAD PYG ED + R + +L
Sbjct: 3 SQAIGVFDSGIGGLSILKALRAELPHENFVYVADSGHAPYGEREDCFVVARSRAITRHLL 62
Query: 73 DKYQPV--LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ VIACNTA LR P++ +G PA+K A +++ I +++T
Sbjct: 63 TQQHVKVKALVIACNTATAAAIHLLREEHPNLPIIGVEPALKPATLLSRTRRIGVMATRG 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE---- 186
TL L S Q L LA +E K + + C
Sbjct: 123 TLASARFKRLRDSLAGQAEFVLQPCDGLADAIERGI-DDKADPGSATEILAACAHHTRAM 181
Query: 187 ----KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-- 240
D +VL CTHYP R L V +LD +AR+ R LP
Sbjct: 182 GPFGLNEGEIDTLVLGCTHYPFASEHLRALLGPHVQFLDTGAPVARQTRLRLPAAEPQTV 241
Query: 241 --QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
LF +G+ + + L S
Sbjct: 242 APAAPGMGQVKLFTTGQTNTLQAAVQHWLQLDS 274
>gi|33152892|ref|NP_874245.1| glutamate racemase [Haemophilus ducreyi 35000HP]
gi|71151975|sp|Q7VKJ3|MURI_HAEDU RecName: Full=Glutamate racemase
gi|33149117|gb|AAP96634.1| glutamate racemase [Haemophilus ducreyi 35000HP]
Length = 265
Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 125/262 (47%), Gaps = 7/262 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL V ++R +P H++Y D+ FPY L +R + +
Sbjct: 1 MKPTILLYDSGMGGLTVYDEIRKKLPNAHYLYYFDNACFPYSEKPTEVLVERATKMVQKM 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L V+ACNTA T++ LR FP +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AKNYPLDLVVVACNTASTVVLPTLRKIFP-FPIVGTVPAIKPAAALSQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y +LI Y C I + S L VE+ I + I +
Sbjct: 120 ITRPYVLSLIEQYAPNCQIEKIGSTALVELVEQKLQTGVIDLTRLTPIIADW---QNHPT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249
D ++L CTH+P+ +QL P +LD+ ++IA R L+ N + ++ A
Sbjct: 177 LDTVILGCTHFPMAKTELQQLLPNVKYFLDSGNAIANRVTHLIMHSPHNQQLEKQRENLA 236
Query: 250 LFLSGKPDIAMR-RLMQGFGLK 270
+ ++MQ +G
Sbjct: 237 FCTQQNNQFKQQAKIMQRWGFP 258
>gi|160898092|ref|YP_001563674.1| glutamate racemase [Delftia acidovorans SPH-1]
gi|160363676|gb|ABX35289.1| glutamate racemase [Delftia acidovorans SPH-1]
Length = 296
Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
+ I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ D +++R + +
Sbjct: 6 SPIGVFDSGIGGLSVLQALRHELPHERFVYLADSGNAPYGDARGDAFVQQRTRTIARHLR 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA D LR+ P + +G PAIK A+ +Q+G + +++T T+
Sbjct: 66 EQHQIKVLVIACNTATAAAVDMLRAEMPELPLIGVEPAIKPASLSSQTGHVGVMATRGTV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-- 190
+ L+ + + H+ LA +EE + + D + E+
Sbjct: 126 SSARFARLVAEHGQRVQFHVQPCDGLAKAIEE-STEQPVPADPMATEVAQLCARYVNALG 184
Query: 191 -------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
D +VL CTHY R L + ++D +AR+ R +L R+ T +
Sbjct: 185 SFGQKTGEMDSLVLGCTHYIFAREQLRTLLGPDIQFIDTGAPVARQTRRVLDRLGTLTSE 244
Query: 244 VFD------DHALFLSGKPDIAMRRLMQGFGLKS 271
L +G + L +
Sbjct: 245 SGPLPAAEGQVQLMTTGSLQALQSAASRWLELPA 278
>gi|119026186|ref|YP_910031.1| glutamate racemase [Bifidobacterium adolescentis ATCC 15703]
gi|166231027|sp|A1A2L6|MURI_BIFAA RecName: Full=Glutamate racemase
gi|118765770|dbj|BAF39949.1| glutamate racemase [Bifidobacterium adolescentis ATCC 15703]
Length = 258
Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ V +++R MP H +Y D PYG +++ + ++
Sbjct: 5 APIGVFDSGLGGISVAREIRRDMPNEHVLYFGDSANAPYGTKSPEQVRELSDVIVKRFVE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
+ VIACNTA + +ELR T+ + +G PA+K A + + + + +TP T
Sbjct: 65 QG-VKAVVIACNTATSAAANELRDTY-DIPIIGMEPALKVACDRGHGKRQRVIVAATPLT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
LR + L+ + + I L VE D + + + F + +
Sbjct: 123 LRERKFAVLMDRFKADHTIFPEPCPGLVEIVEHGQLD---DHDVVMRTLHQYFDQYDLST 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+ FR+L P +D ++ R +L + +
Sbjct: 180 IDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLAPEDAEGSIDL 239
Query: 252 LSGKPDIAMRRLMQGF 267
+ + +L Q
Sbjct: 240 ANSDTSARIAQLAQSL 255
>gi|160892852|ref|ZP_02073641.1| hypothetical protein CLOL250_00382 [Clostridium sp. L2-50]
gi|156865411|gb|EDO58842.1| hypothetical protein CLOL250_00382 [Clostridium sp. L2-50]
Length = 259
Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 5/240 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
I IFDSGIGG+ VL+++ LMPE ++IY D PYG + ++
Sbjct: 1 MNDNSRPIGIFDSGIGGISVLKEIVALMPEENYIYYGDSAHAPYGTRQVADIQNLSRSCV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+L+ + VIACNTA + LR+ +P + +G PA+K A + + I++++T
Sbjct: 61 EFLLE-HDAKAIVIACNTATSAAAAMLRADYPDIPVIGIEPALKPAVLWKEHDRIAVMAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P TL++ +L+H+Y + I+ V L VE + ++ ++
Sbjct: 120 PMTLKQDKFLSLMHTYEDRSVIYRVPCPKLVGFVENG----DLDSPKLHDYLQEVLSPYL 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
K D IVL CTHYP + + R + + S A R L D
Sbjct: 176 EKGIDAIVLGCTHYPFVEKMIRTVVGPDIKIFVGSHGTAVELRRRLIAAGLKSDSTGDGT 235
>gi|228926020|ref|ZP_04089101.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228833732|gb|EEM79288.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 265
Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 52/254 (20%), Positives = 103/254 (40%), Gaps = 7/254 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+H + +H + LA+ VE + ++++ + + D ++
Sbjct: 119 YEKALHELDTYLKVHSHACPNLATVVENRLE----DTAYVTQQVKQALLPLTKEDIDTLI 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSV 234
Query: 257 DIAMRRLMQGFGLK 270
+ G +
Sbjct: 235 SSFEHIAERWLGYQ 248
>gi|317474408|ref|ZP_07933682.1| Asp/Glu/Hydantoin racemase [Bacteroides eggerthii 1_2_48FAA]
gi|316909089|gb|EFV30769.1| Asp/Glu/Hydantoin racemase [Bacteroides eggerthii 1_2_48FAA]
Length = 279
Score = 269 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILSKIREILPEYDYIYLGDNARAPYGTRSFEVVYAFTLQAVTRLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L + LG + P ++ T+S + +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPHLDSARRVLGVIRPTVECIGNITRSRHVGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ I + + + S VE + I+K I
Sbjct: 129 TSGTIKSESYPLEIRKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFIRKYINELLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D +L CTHYP+++ +Q P + + +A + L R +
Sbjct: 187 KDREIDTAILGCTHYPILLPKIQQYMPAGITIVSQGQLVADSLKDYLHRHPEIDIKCTRG 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + +
Sbjct: 247 GKCTYYTTEAEEKFIE 262
>gi|182420059|ref|ZP_02951293.1| glutamate racemase [Clostridium butyricum 5521]
gi|237669542|ref|ZP_04529522.1| glutamate racemase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376096|gb|EDT73683.1| glutamate racemase [Clostridium butyricum 5521]
gi|237654986|gb|EEP52546.1| glutamate racemase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 256
Score = 269 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 67/244 (27%), Positives = 110/244 (45%), Gaps = 7/244 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I FDSG+GGL VL++ +MP ++IY D PYG E + K L F D L
Sbjct: 5 NSPIGFFDSGVGGLSVLKEAISIMPNENYIYFGDSKNAPYGTKELDEV-KHLTFNAVDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA + +E+R+ + +G PA+K A ++G I I++TP TL
Sbjct: 64 REKNVKAIVVACNTATSAAIEEIRNKHNDIPIIGIEPALKPAVKLKRNGKIIIMATPMTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y +I + L +E ++ DE++K ++ F +
Sbjct: 124 REKKFKQLMVKYQEGSNIVPMPCAGLVEFIENGI----LEGDELEKYLKNKF-DIYFDDI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
IVL CTHYP I ++ + +D + + L T ++ + ++
Sbjct: 179 AAIVLGCTHYPFIKETLAKVVGSEIPLIDGGAGTSHELQRKLEEKGTISVSKNIGNVEIY 238
Query: 252 LSGK 255
S
Sbjct: 239 NSTN 242
>gi|298253437|ref|ZP_06977229.1| glutamate racemase [Gardnerella vaginalis 5-1]
gi|297532832|gb|EFH71718.1| glutamate racemase [Gardnerella vaginalis 5-1]
Length = 256
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I +FDSG+GG+ V +++ +P IY D PYG +KK + +
Sbjct: 4 SAAIGVFDSGLGGISVARQLHAALPHERIIYFGDSANAPYGIKTPEEVKKLSFAIVEHFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPA 130
+ VIACNTA + ++LR+ + ++ +G PA+K A + + + +TP
Sbjct: 64 -RLNVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGEPQRVIVAATPL 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR ++L+ + I L VE D + + F E +
Sbjct: 122 TLRERKFADLLQRFSQNNTIFSQPCPDLVRIVERGELS---NRDVVFAALHKYFDEYDLD 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+ FR+ P + +D ++ R +L N + +
Sbjct: 179 SIDSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKILELNNELASDSQEGSIT 238
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + M++L +
Sbjct: 239 LTNSDTSLRMQQLAKSL 255
>gi|297620368|ref|YP_003708505.1| Glutamate racemase [Waddlia chondrophila WSU 86-1044]
gi|297375669|gb|ADI37499.1| Glutamate racemase [Waddlia chondrophila WSU 86-1044]
Length = 276
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 7/258 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N+I +FDSG+GGL V++ + +P+ IY D PYG + + + + +L
Sbjct: 2 NAIAVFDSGLGGLTVVKALCEHLPQEEIIYFGDTARVPYGGKSRETVIRYAREISAFLLS 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VI CNTA D L + + + + + + Q+ I++L T AT+R
Sbjct: 62 Q-EIKALVIGCNTASAYAADLLAAEL-ELPVFNVIDPLIEEISACQAEHIAVLGTAATVR 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + +S + VEE+ + +E + +R D
Sbjct: 120 SGIYQARLAQKIPNVKVTGISCPLFVPIVEEHFQNHP----AARLIVEEYLFRVKDERMD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
+VL CTHYPL+ + R+ V +D++ + A++ + L + + V F+
Sbjct: 176 TVVLGCTHYPLLYCLIREYLGDEVRIVDSASACAKQIQAALFSHPFNNSLSVKGKLKYFV 235
Query: 253 SGKPDIAMRRLMQGFGLK 270
S P+ Q G++
Sbjct: 236 SDDPERFKHLGEQFLGVE 253
>gi|229830192|ref|ZP_04456261.1| hypothetical protein GCWU000342_02301 [Shuttleworthia satelles DSM
14600]
gi|229791490|gb|EEP27604.1| hypothetical protein GCWU000342_02301 [Shuttleworthia satelles DSM
14600]
Length = 258
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 7/249 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ I +FDSG+GG+ VL+++ LMP F+Y D PYG E +++ +
Sbjct: 1 MVREKNAPIAVFDSGMGGISVLRELVKLMPREDFLYFGDSKNAPYGTRELPEIQELTIRN 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++++ ++V ACNTA + +LR +P+ +G PA+K A G + +++
Sbjct: 61 IQHLMNRGCKAVAV-ACNTATSAAVRKLREMYPNFPIVGIEPAVKPACMENPGGKVLVMA 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP T+R L + I +S L VEE + + E+ +E
Sbjct: 120 TPMTVRLGKLHLLCERFRHVAQIETLSCPGLMEFVEEG----RDQTPELMHFLEELLAPY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +VL CTHYP + ++L V D + AR + +
Sbjct: 176 --RDVDAVVLGCTHYPFVRKQVQELMGASVKIYDGAAGTARELLRRIRLEDLETESKELG 233
Query: 248 HALFLSGKP 256
+F + P
Sbjct: 234 SVIFENSDP 242
>gi|218264477|ref|ZP_03478310.1| hypothetical protein PRABACTJOHN_04010 [Parabacteroides johnsonii
DSM 18315]
gi|218221970|gb|EEC94620.1| hypothetical protein PRABACTJOHN_04010 [Parabacteroides johnsonii
DSM 18315]
Length = 278
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 56/248 (22%), Positives = 96/248 (38%), Gaps = 11/248 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL + K+R MP Y +IY+ D+ PYG + + + +
Sbjct: 7 GPIGIFDSGYGGLTIFDKIREAMPGYDYIYLGDNARSPYGTRSFEVVYRFTRQAVETLFN 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ L ++ACNTA ++ P+ LG + P ++ ++S + IL
Sbjct: 67 EG-CQLVILACNTASAKALRTIQQRDLPQWDPARRVLGVIRPTVELMDKISKSKHVGILG 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ S I + + + VE G + ++K +E
Sbjct: 126 TTGTITSGSYSLEIKKMFPHMTVTGEACPMWVPLVENNEFGSPGADYFVRKHLEHILA-- 183
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245
+ D +VL CTHYPL++ + P + + +A L R R+
Sbjct: 184 TDPKIDTLVLGCTHYPLLIEKIKAFLPAGITLFSQGEYVAASLTDYLHRHPEMDIRLTKQ 243
Query: 246 DDHALFLS 253
+ +
Sbjct: 244 GNCRFLTT 251
>gi|298374652|ref|ZP_06984610.1| glutamate racemase [Bacteroides sp. 3_1_19]
gi|298269020|gb|EFI10675.1| glutamate racemase [Bacteroides sp. 3_1_19]
Length = 276
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 95/259 (36%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + + +
Sbjct: 7 GPIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVLRLFE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA ++ P+ LG + P ++ +++ I I+
Sbjct: 67 SG-CQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVG 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + I + + + VE + +KK I+
Sbjct: 126 TSGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHILS-- 183
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245
+ D ++L CTHYPL++ R P + + +A R L R ++
Sbjct: 184 VDPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRKLTKG 243
Query: 246 DDHALFLSGKPDIAMRRLM 264
+ +
Sbjct: 244 GSCRFLTTESAEKFSEAAS 262
>gi|228944589|ref|ZP_04106959.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229120481|ref|ZP_04249728.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|228663066|gb|EEL18659.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|228815049|gb|EEM61300.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 265
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 52/254 (20%), Positives = 103/254 (40%), Gaps = 7/254 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVEFLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNTAAAATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+H + +H + LA+ VE + ++++ + + D ++
Sbjct: 119 YEKALHELDTYLKVHSHACPTLATVVENRLE----DTAYVTQQVKQALLPLTKEDIDTLI 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSV 234
Query: 257 DIAMRRLMQGFGLK 270
+ G +
Sbjct: 235 SSFEHIAERWLGYQ 248
>gi|46199582|ref|YP_005249.1| glutamate racemase [Thermus thermophilus HB27]
gi|81567628|sp|Q72I52|MURI_THET2 RecName: Full=Glutamate racemase
gi|46197208|gb|AAS81622.1| glutamate racemase [Thermus thermophilus HB27]
Length = 257
Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 17/260 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I +FDSG+GGL VL+ +R L+P F+Y D PYG +++ +
Sbjct: 1 MKDPKAPIGVFDSGVGGLTVLKALRRLLPREEFLYFGDTARVPYGGKPLAMVRRFAWEIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+L + V+ACNTA + +L F PA + A + + + ++ T
Sbjct: 61 GFLL-RQGVKAIVVACNTASSAALPDLAEDLSVPVFGVVEPAARAARGFRK---VGLIGT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + VEE + +D + + ++E
Sbjct: 117 QATVESGAYPRYVDLA------WAKACPLFVPLVEEG-----LWDDPVALLVARHYLEDA 165
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
K + ++L CTHYP + + P V LD+++ AR L
Sbjct: 166 PKDLEALILGCTHYPFLKGAIGAVLP-GVALLDSAELTAREVARALEAEGLLNPEGRGRT 224
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
++G P+ A R L + G
Sbjct: 225 LHLVTGDPE-AYRALAERLG 243
>gi|170747215|ref|YP_001753475.1| glutamate racemase [Methylobacterium radiotolerans JCM 2831]
gi|170653737|gb|ACB22792.1| glutamate racemase [Methylobacterium radiotolerans JCM 2831]
Length = 291
Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats.
Identities = 98/244 (40%), Positives = 143/244 (58%), Gaps = 2/244 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +IL+FDSG+GGL VL +R P+ ++YV DD FPYG + L R++ + +
Sbjct: 20 AEPTILVFDSGLGGLTVLDAVRRARPDARYVYVGDDAAFPYGRLSEATLVARVLTVMERL 79
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++P L VIACNTA TL+ LR F + F+G VP IK AA T+S L+++L+TP T
Sbjct: 80 VATHRPDLVVIACNTASTLVLPALRQRFTT-PFVGVVPPIKPAAEATRSRLVTLLATPGT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF-IEKEGK 190
+ R+YT +LI +Y C + LV S LA E G + + + EI CF E +G+
Sbjct: 139 VARSYTHDLIATYAGTCAVTLVGSQNLAGFAEAELAGAPVDDAALAAEIAPCFVAEADGR 198
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
RTDV+ LACTHYPL++ + ++PWPV W+D + +IARR L+ R
Sbjct: 199 RTDVVCLACTHYPLLLPRLQAVAPWPVTWIDPAPAIARRVVQLIGPRPREADRHGSALGA 258
Query: 251 FLSG 254
F +G
Sbjct: 259 FTAG 262
>gi|187934900|ref|YP_001884328.1| glutamate racemase [Clostridium botulinum B str. Eklund 17B]
gi|229486235|sp|B2THT3|MURI_CLOBB RecName: Full=Glutamate racemase
gi|187723053|gb|ACD24274.1| glutamate racemase [Clostridium botulinum B str. Eklund 17B]
Length = 258
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 5/234 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I FDSG+GGL V+++ LMP ++IY D PYG ++
Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAIRLMPNENYIYFGDSKNAPYGVKTVEEVRTLTFNAVES 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L+K V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP
Sbjct: 63 LLEK-NVKAIVVACNTATSAAIDLVRSKYENIPIIGIEPALKLATKYNRKGNIIIMATPM 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ +L+ Y I + L +E + E+ +K++ F +
Sbjct: 122 TLKENKFKSLMEKYGENYDIVSLPCAKLVEFIEHGILSGEELEEYLKEK----FKPYKNN 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
V+VL CTHYP I ++ + +D ++ R L N T
Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTEE 231
>gi|187923408|ref|YP_001895050.1| glutamate racemase [Burkholderia phytofirmans PsJN]
gi|187714602|gb|ACD15826.1| glutamate racemase [Burkholderia phytofirmans PsJN]
Length = 284
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 9/244 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + ++ +
Sbjct: 11 PVGIFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAIGEWLVKQ 70
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA +R P + +G P +K AA +++ + +L+T TLR
Sbjct: 71 GAKAL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKTRVAGVLATQVTLRS 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + C L VE + E++ + G D
Sbjct: 129 ARFQALLERYAADCRFLCQPGHGLVQAVER----CDVGSAELRALLRGYLQPMLDAGADT 184
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHALF 251
+VL CTHYP + R + + +D S +IAR+ +L + + F
Sbjct: 185 LVLGCTHYPFLDAAIRDIVGDRLMLIDTSIAIARQLERVLDQHGLRAVPPSAATVSPRFF 244
Query: 252 LSGK 255
+G
Sbjct: 245 STGD 248
>gi|56552093|ref|YP_162932.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543667|gb|AAV89821.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 276
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 128/226 (56%), Gaps = 1/226 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSRPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K + E++ + EG R
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDR 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L ++
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYLADQL 225
>gi|218131992|ref|ZP_03460796.1| hypothetical protein BACEGG_03615 [Bacteroides eggerthii DSM 20697]
gi|217985868|gb|EEC52208.1| hypothetical protein BACEGG_03615 [Bacteroides eggerthii DSM 20697]
Length = 279
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + +
Sbjct: 10 GPIGVFDSGYGGLTILSKIREILPEYDYIYLGDNARAPYGTRSFEVVYAFTLQAVTRLFE 69
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA +L + LG + P ++ T+S + +L+
Sbjct: 70 -MGCHLVILACNTASAKALRSIQINDLPHLDSARRVLGVIRPTVECIGNITRSRHVGVLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ I + + + S VE + I+K I
Sbjct: 129 TSGTIKSESYPLEIRKLFPDIKVSGEACPLWVSLVENNEALGDGTDYFIRKYINELLA-- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D +L CTHYP+++ +Q P + + +A + L R +
Sbjct: 187 KDREIDTAILGCTHYPILLPKIQQYMPAGITIVSQGQLVADSLKDYLHRHPEIDIKCTRG 246
Query: 246 DDHALFLSGKPDIAMR 261
+ + + +
Sbjct: 247 GKCTYYTTEAEEKFIE 262
>gi|319763448|ref|YP_004127385.1| glutamate racemase [Alicycliphilus denitrificans BC]
gi|330824305|ref|YP_004387608.1| glutamate racemase [Alicycliphilus denitrificans K601]
gi|317118009|gb|ADV00498.1| glutamate racemase [Alicycliphilus denitrificans BC]
gi|329309677|gb|AEB84092.1| glutamate racemase [Alicycliphilus denitrificans K601]
Length = 287
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ + +++R + + +
Sbjct: 8 RPIGVFDSGIGGLSVLQALRHELPHEDFVYLADSGNAPYGDAKGEAFVQQRTLAIARWLR 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ V+ACNTA + LR+T P + +G PA+K AAA +Q+ + +L+T T+
Sbjct: 68 AQHGIKALVVACNTATAAAVERLRATLPDLPAIGVEPALKPAAARSQTHHVGVLATRGTV 127
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCF----- 184
+ L + ++ + + LA +E E +I+
Sbjct: 128 SSARFARLHDEHGARTRFAVQACDGLARAIEQSTEEPLPATESATKIRALCARYTGALGR 187
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR- 243
+ D +VL CTHY R L V LD ++AR+ R +L +
Sbjct: 188 FGLKTGDIDTLVLGCTHYVFAKDALRDLVGPDVQILDTGAAVARQTRRILAQAGALAHER 247
Query: 244 ---VFDDHALFLSGKPDIAMRRLMQGFGLKS 271
L+ +G+ + L +
Sbjct: 248 PGAPPGGIRLYTTGQLGALQAAAGRWLQLPA 278
>gi|308047962|ref|YP_003911528.1| glutamate racemase [Ferrimonas balearica DSM 9799]
gi|307630152|gb|ADN74454.1| glutamate racemase [Ferrimonas balearica DSM 9799]
Length = 258
Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats.
Identities = 80/258 (31%), Positives = 127/258 (49%), Gaps = 8/258 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL + Q +R +P + Y+AD+ FPYG L + + L +
Sbjct: 2 GAILLFDSGLGGLTIYQHIRQALPNRRYRYLADNARFPYGELAPDELVQGCVDLIRAQMA 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACN+A TL+ + LR+ +G VPAIK AAA + +I +L+TP T+R
Sbjct: 62 EEPIDLVVIACNSASTLVLEPLRAAIDC-PVVGVVPAIKPAAAMSHRKVIGLLATPGTVR 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT L + + C + + S L E+ G + + +E E ++ D
Sbjct: 121 RPYTDELAAQFAADCELVRLGSSELVWLAEQKLAGQPVSCSQ----LEPILGEFLQRQPD 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V+VL CTH+PL+ Q+ V +D+ +IARR LL + + F +
Sbjct: 177 VVVLGCTHFPLLREEIGQVLGPQVRLIDSGAAIARRVSQLLG--GEEKEGAVFAASFFHT 234
Query: 254 GK-PDIAMRRLMQGFGLK 270
G+ P + ++ G
Sbjct: 235 GEAPAPSATVYLREQGFS 252
>gi|150014924|ref|YP_001307178.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
gi|149901389|gb|ABR32222.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
Length = 284
Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats.
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 5/243 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GGL V+++ +MP +FIY D PYG + ++ + +L K
Sbjct: 32 PIGFFDSGVGGLSVMREAISIMPNENFIYFGDSKNAPYGIKKVIEVRDLTIDAVEFLLSK 91
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + +E+RS + ++ +G PA+K A + G I I++TP TLR
Sbjct: 92 -NVKAVVIACNTATSAAIEEIRSKYKQISIIGIEPALKPAVKLNRKGQIIIMATPMTLRE 150
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y ++ I + L +E+ ++ ++++ ++ F
Sbjct: 151 KKFKLLMDKYKNEADIISLPCAGLVEFIEQGI----VEGEDLEYYLKEKFKGYLDNDISS 206
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
IVL CTHYP I + + +D A+ + L + +
Sbjct: 207 IVLGCTHYPFIKKALSNVIGKEIPLIDGGFGTAQELKRKLIESGLLNDSKEKGNIEICNS 266
Query: 255 KPD 257
D
Sbjct: 267 IND 269
>gi|294649135|ref|ZP_06726577.1| glutamate racemase [Acinetobacter haemolyticus ATCC 19194]
gi|292825018|gb|EFF83779.1| glutamate racemase [Acinetobacter haemolyticus ATCC 19194]
Length = 295
Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 11/265 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSGIGGL + Q++ +P +Y AD PYG D ++
Sbjct: 16 QASADAPIGIFDSGIGGLSIAQEIALHLPNERILYYADTAHVPYGARSDQEIRNLTAQAI 75
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILS 127
+ L + ++V+ACNTA D LR + +G VPA+K A TQ+ ++++L+
Sbjct: 76 -EWLYRQGCKVAVVACNTASAFSLDYLRDHYGERFPIIGLVPALKPAVIQTQTKVVAVLA 134
Query: 128 TPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
TPAT R +++ ++ + + V+++ L VE + K ++
Sbjct: 135 TPATFRGRLIKDVMLNFAEPAGVKVLTVTNLALVPFVEAGEQ----MSEACKAVLKQILQ 190
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +VL CTHYP + RQ+ + +D+ ++AR+ +L + ++
Sbjct: 191 PVIEQGADFLVLGCTHYPFLKPAIRQVFDEKLKLIDSGQAVARQTAYILIKNGLLFDKIR 250
Query: 246 DDH---ALFLSGKPDIAMRRLMQGF 267
+ F+SG + ++Q
Sbjct: 251 HNVSRIECFVSGNNAAVLEPVLQHL 275
>gi|303326014|ref|ZP_07356457.1| glutamate racemase [Desulfovibrio sp. 3_1_syn3]
gi|302863930|gb|EFL86861.1| glutamate racemase [Desulfovibrio sp. 3_1_syn3]
Length = 276
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 4/257 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL VL+ + +P +Y+ D PYG + + + ++D+
Sbjct: 8 PVALFDSGVGGLTVLKALADRLPGEDLLYLGDTARLPYGTKGRETITRYTLLAARKLVDR 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA LR F + +G V P + AA +++G I +++T AT+
Sbjct: 68 GA-KMLVVACNTATAAALPALREHFAPLPVVGVVEPGARAAARTSRNGEIVVIATEATIT 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRT 192
I + H+ + + EE + E ++ +E F R
Sbjct: 127 GGAYQQAITRIRPEAHVRGRACTLFVPMAEEGWMDGPLVEGIARRYLEDMFTPAVTAPRP 186
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251
D ++L CTH+PL+ + + V +D++ + A L R++ +T
Sbjct: 187 DTLLLGCTHFPLLQAALQNVVGPQVRIVDSAATTAESVEEELTRLDLLRTDEHTGVRRFM 246
Query: 252 LSGKPDIAMRRLMQGFG 268
+ + R G
Sbjct: 247 TTDNRERFARTGGHFLG 263
>gi|241762044|ref|ZP_04760128.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241373510|gb|EER63097.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 276
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 84/226 (37%), Positives = 128/226 (56%), Gaps = 1/226 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSRPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K + E++ + EG +
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDQ 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L ++
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYLADQL 225
>gi|11386951|sp|Q9RU10|MURI_DEIRA RecName: Full=Glutamate racemase
Length = 290
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 8/252 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL VL +++ +P+ +Y+AD PYG D ++ ++++ +
Sbjct: 19 PIGVFDSGAGGLSVLAELQRALPQEDVLYLADTAHVPYGARSDEDIRDLTARAVAELVRR 78
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA LR F + +G VPA+K A A T+SG++ +L+TP TLR
Sbjct: 79 G-VKAVVVACNTASAFSLTHLRERF-ELPIIGLVPAVKPAVAATKSGVVGVLATPGTLRG 136
Query: 135 TYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
T +++I + + + S L VE E + +
Sbjct: 137 TLLADVIRQWAEPAGVRVMQAVSTELVPLVEAGKA----DSPEARVVLRDVLEPLAEAGA 192
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP + R +D+ ++AR R +L R + +L
Sbjct: 193 DQLVLGCTHYPFLAGSIRAEFGDTFALVDSGAAVARHTRNVLSRGGLLRGGDRTGEVSYL 252
Query: 253 SGKPDIAMRRLM 264
+ +R L+
Sbjct: 253 TTSDPAHLRALL 264
>gi|238754700|ref|ZP_04616052.1| Glutamate racemase [Yersinia ruckeri ATCC 29473]
gi|238707008|gb|EEP99373.1| Glutamate racemase [Yersinia ruckeri ATCC 29473]
Length = 248
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 130/244 (53%), Gaps = 4/244 (1%)
Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88
Q++R L+P+ H+IY D+V FPYG + + +R++ + + + ++ + VIACNTA
Sbjct: 2 YQEIRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQQHPLAIVVIACNTAS 61
Query: 89 TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148
T+ LR F S +G VPAIK AA T++G++ +L+T AT+ R+YT +LI + + C
Sbjct: 62 TVSLPALRERF-SFPVVGVVPAIKPAARLTRNGVVGLLATRATVHRSYTLDLIARFATDC 120
Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
I L+ S L E G ++ +KK + +E D +VL CTH+PL+
Sbjct: 121 KIELLGSSELVELAETKLHGGEVSLSVLKKILNPWLSMREP--PDTVVLGCTHFPLLAEE 178
Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGF 267
Q+ P +D+ +IARR L+ + D+ A L+ A+ ++QG+
Sbjct: 179 LAQVLPEGTRMVDSGAAIARRTAWLISSQENVISTQEDNVAYCLTLDAGTDALLPVLQGY 238
Query: 268 GLKS 271
G +
Sbjct: 239 GFPT 242
>gi|329919573|ref|ZP_08276562.1| glutamate racemase [Lactobacillus iners SPIN 1401G]
gi|328937378|gb|EGG33800.1| glutamate racemase [Lactobacillus iners SPIN 1401G]
Length = 261
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 64/266 (24%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ +
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L K + + CNTA ++ P M +G + A+ TQ+
Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEI 180
+++++T AT+ I +Q + + LA VE DEIK +
Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN------PSDEIKMAVV 164
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
C + + D ++L CTHYPL++ + +D +D +A+ +L R N
Sbjct: 165 AQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLL 224
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQG 266
+ H + +G P M+ +
Sbjct: 225 AEK-GGKHEYYTTGDPIKFMKIAQKW 249
>gi|325859706|ref|ZP_08172836.1| glutamate racemase [Prevotella denticola CRIS 18C-A]
gi|325482632|gb|EGC85635.1| glutamate racemase [Prevotella denticola CRIS 18C-A]
Length = 279
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + +
Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGSRSFDIVYQFTRQAVMKLF- 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ CNTA ++ P+ LG + P + T+S + +L+
Sbjct: 68 GLGCQLVILGCNTASAKALRTIQQNDLPALDPNRRVLGVIRPTAEIIGRLTRSRHVGLLA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+R + I + V + +E + +KK I+ I +
Sbjct: 128 TEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH--IMR 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ D ++L CTHYP+++ + P V + + +A R L R R
Sbjct: 186 IDPQIDSLILGCTHYPILMPKILKHVPRGVRIIPQGEYVAESLRDYLRRHPDMDARCTKQ 245
Query: 246 DDHALFLSGKPDIAMR 261
+ P+
Sbjct: 246 STVKYLTTENPEKFKE 261
>gi|307564832|ref|ZP_07627360.1| glutamate racemase [Prevotella amnii CRIS 21A-A]
gi|307346554|gb|EFN91863.1| glutamate racemase [Prevotella amnii CRIS 21A-A]
Length = 278
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L ++ L+PEY +IY+ D+ PYG+ + + + D
Sbjct: 8 GPIGVFDSGYGGLTILHAIQKLLPEYDYIYLGDNARAPYGSRSFDVVYEFTRQAVLKLFD 67
Query: 74 KYQPVLSVIACNTAFTLIKDEL-RSTFPSM----AFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ CNTA + R+ P + LG + P + T S I IL+
Sbjct: 68 -MGCSLVILGCNTASAKALRTIQRNDLPVIAPDNRVLGVIRPTAEVVGLLTHSNHIGILA 126
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+R + I + + ++ + +E + +KK IE I +
Sbjct: 127 TEGTVRSKSYNIEIQKLWPKISVTGIACPLWVPIIENNEADSPGADYFVKKRIEH--IMR 184
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ D I+L CTHYP+++ + + + +A+ + L R +
Sbjct: 185 LDPQIDTIILGCTHYPILMPKILKHINKGIKIVAQGKYVAQSLKDYLYRHPEMDKKCTKQ 244
Query: 246 DDHALFLSGKPDIAMR 261
+ + P
Sbjct: 245 GTTKYYTTENPSKFTE 260
>gi|260752377|ref|YP_003225270.1| glutamate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258551740|gb|ACV74686.1| glutamate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 276
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 130/226 (57%), Gaps = 1/226 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSHPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K ++E++ + EG R
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYREELDRLLQQPEGDR 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L ++
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYLADQL 225
>gi|209521399|ref|ZP_03270111.1| glutamate racemase [Burkholderia sp. H160]
gi|209498175|gb|EDZ98318.1| glutamate racemase [Burkholderia sp. H160]
Length = 295
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 67/246 (27%), Positives = 106/246 (43%), Gaps = 9/246 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I IFDSG+GGL VL+ +R +P +YVAD + PYG +D + R + + +
Sbjct: 20 QAPIGIFDSGLGGLSVLRAVRAQLPAEALLYVADSLYAPYGERDDDFITDRTLAIGEWLA 79
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VL V+ACNTA +R P + +G P +K AA ++S + +L+T ATL
Sbjct: 80 AQGAKVL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKSRVAGVLATQATL 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE + E++ +
Sbjct: 138 RSARFQGLLERYAADCRFLCQPGHGLVQAVER----CDVGSAELRALLRSYLEPMLDAGA 193
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---A 249
D +VL CTHYP + R + + +D S +IAR+ +L +
Sbjct: 194 DTLVLGCTHYPFLDAAIRDIVGERLTLIDTSVAIARQLERVLQQHGLRAATPATSTPLPR 253
Query: 250 LFLSGK 255
+ +
Sbjct: 254 FYSTDD 259
>gi|226951878|ref|ZP_03822342.1| glutamate racemase [Acinetobacter sp. ATCC 27244]
gi|226837418|gb|EEH69801.1| glutamate racemase [Acinetobacter sp. ATCC 27244]
Length = 295
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 11/265 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSGIGGL + Q++ +P +Y AD PYG D ++
Sbjct: 16 QASADAPIGIFDSGIGGLSIAQEIALHLPNERILYYADTAHVPYGARSDQEIRNLTAQAI 75
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILS 127
+ L + ++V+ACNTA D LR + +G VPA+K A TQ+ ++++L+
Sbjct: 76 -EWLYRQGCKVAVVACNTASAFSLDYLRDHYGERFPIIGLVPALKPAVIQTQTKVVAVLA 134
Query: 128 TPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
TPAT R +++ ++ + + V+++ L VE + K ++
Sbjct: 135 TPATFRGRLIKDVMLNFAEPAGVKVLTVTNLALVPFVEAGEQ----MSEACKAVLKQILQ 190
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +VL CTHYP + RQ+ + +D+ ++AR+ +L + ++
Sbjct: 191 PVIEQGADFLVLGCTHYPFLKPAIRQVFDEKLKLIDSGQAVARQTAYILIKNGLLFDKIR 250
Query: 246 DDH---ALFLSGKPDIAMRRLMQGF 267
+ F+SG + ++Q
Sbjct: 251 HNVSRIECFVSGNNAAVLEPVLQHL 275
>gi|261337748|ref|ZP_05965632.1| glutamate racemase [Bifidobacterium gallicum DSM 20093]
gi|270277201|gb|EFA23055.1| glutamate racemase [Bifidobacterium gallicum DSM 20093]
Length = 258
Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 100/257 (38%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V++++R +P H +Y D PYG +++ + + +
Sbjct: 4 SAPIGVFDSGLGGLSVVRQIREDLPNEHVLYFGDSAHAPYGVKTPDEVRELSFGIVDNFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL--ISILSTPA 130
+ VIACNTA + +ELR T+ + +G PA+K A Q I + +T
Sbjct: 64 -RQGAKAIVIACNTATSAAVNELRDTY-DVPIIGMEPALKVAVDRGQGQRQNIIVAATEL 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR L+ + + IH + L VE + + + +
Sbjct: 122 TLRERKFEQLMQRFEADHTIHRLPCPDLVEIVEHGQLD---DTALVDATLRRYLHDYDLD 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D IVL CTH+ F+++ P +D + A R +L +
Sbjct: 179 TIDAIVLGCTHFVFYRDAFQRIVPEHTAIIDGNAGTAHHLRVVLESLGALAPEDQQGGVS 238
Query: 251 FLSGKPDIAMRRLMQGF 267
+ M L
Sbjct: 239 VTNSDTSAQMANLAHKL 255
>gi|309805303|ref|ZP_07699354.1| glutamate racemase [Lactobacillus iners LactinV 09V1-c]
gi|312875202|ref|ZP_07735215.1| glutamate racemase [Lactobacillus iners LEAF 2053A-b]
gi|308165379|gb|EFO67611.1| glutamate racemase [Lactobacillus iners LactinV 09V1-c]
gi|311089309|gb|EFQ47740.1| glutamate racemase [Lactobacillus iners LEAF 2053A-b]
Length = 261
Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats.
Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 19/266 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ +
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L K + + CNTA ++ P M +G + A+ TQ+
Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE-I 180
+++++T AT+ I +Q + + LA VE DEIKK +
Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN------PSDEIKKAVV 164
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
C + + D ++L CTHYPL++ + +D +D +A+ +L R N
Sbjct: 165 AQCLAPLKHVQYDTLILGCTHYPLLIREIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLL 224
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQG 266
+ H + +G P M+ +
Sbjct: 225 AAK-GGKHEYYTTGDPIKFMKIAQKW 249
>gi|333029733|ref|ZP_08457794.1| Glutamate racemase [Bacteroides coprosuis DSM 18011]
gi|332740330|gb|EGJ70812.1| Glutamate racemase [Bacteroides coprosuis DSM 18011]
Length = 279
Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 99/260 (38%), Gaps = 11/260 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K I +FDSG GGL +L+K+R +PEY +IY+ D+ PYG + K +
Sbjct: 5 SKRPGPIGVFDSGYGGLTILEKIRKKLPEYDYIYLGDNARAPYGTRSFELVYKFTLQAVK 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLI 123
+ ++ L ++ACNTA ++ P LG + P ++ T S I
Sbjct: 65 HLFEEG-CHLVILACNTASAKALRSIQQNDLPLLDPQRRVLGVIRPTVESINELTISNHI 123
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T T++ + + + + VE + +K+ I+
Sbjct: 124 GVVATLGTIKSESYPLELAKLFPHIKVSGEACPMWVPLVENNEFDTPGADYFVKQSIDNL 183
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQ 241
++ D I+L CTHYPL+ Q P + + +A+ + L R
Sbjct: 184 L--QQDSDIDTILLGCTHYPLLQSKIEQFVPNNIKVIAQGQYVAKSLQNYLERHPEIDRN 241
Query: 242 TRVFDDHALFLSGKPDIAMR 261
+ D
Sbjct: 242 CTKEGRCRFLTTEAVDKFKE 261
>gi|298373442|ref|ZP_06983431.1| glutamate racemase [Bacteroidetes oral taxon 274 str. F0058]
gi|298274494|gb|EFI16046.1| glutamate racemase [Bacteroidetes oral taxon 274 str. F0058]
Length = 282
Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 92/246 (37%), Gaps = 11/246 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+ + +P+Y ++Y+ D+ PYG + + + D
Sbjct: 14 IGVFDSGYGGLTVLKDIIEQLPQYDYVYLGDNARTPYGTRSYEVVYGYTLQCVRRLFD-M 72
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
+ ++ACNTA ++ P LG + P + + T++ + IL T
Sbjct: 73 DCRIVILACNTASAKALRSIQQNDLPLIAPDRRVLGVIRPTAESIGSLTKTNTVGILGTT 132
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+R I + + + +E + IKK I+ +
Sbjct: 133 GTIRSQSYEIEIKKLFPRIEVVSQECPMWVPLIENNEHLTAGADYFIKKYIDSILA--KN 190
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDD 247
D +VL CTHYPLI + P + + +A L R +
Sbjct: 191 NNIDTLVLGCTHYPLIADSIARFVPEGIRIVHQGAIVAASLDDYLHRHPEQEQYCSKGST 250
Query: 248 HALFLS 253
+ +
Sbjct: 251 VEFYTT 256
>gi|330817737|ref|YP_004361442.1| Glutamate racemase [Burkholderia gladioli BSR3]
gi|327370130|gb|AEA61486.1| Glutamate racemase [Burkholderia gladioli BSR3]
Length = 288
Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 8/254 (3%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D + + IFDSG+GGL VL+ +R +P+ F+YVAD PYG +D + +R
Sbjct: 6 DFASEDSTTAAPVGIFDSGLGGLSVLRAVRAQLPDESFVYVADSRHAPYGERDDAFIIER 65
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + + + L V+ACNTA +R T ++ +G P IK A ++S +
Sbjct: 66 TLAIGEWLAARGAKAL-VVACNTATAQSIAVVRETL-AIPLVGVEPGIKPATLASRSRVA 123
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T ATLR +LI Y + C L +E G ++ ++G
Sbjct: 124 GVLATAATLRSARFESLIERYAADCRFLRQPGHGLVEAIERGDTG----SPALRALLDGY 179
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT- 242
D +VL CTHYP + R+L+ + +D S++IAR+ +L
Sbjct: 180 LEPMLAAGADTLVLGCTHYPFLDATIRELTQDRLTLIDTSEAIARQLARVLEDHGLRAPA 239
Query: 243 -RVFDDHALFLSGK 255
L+ +
Sbjct: 240 GTAARPPRLYSTDD 253
>gi|281421511|ref|ZP_06252510.1| glutamate racemase [Prevotella copri DSM 18205]
gi|281404583|gb|EFB35263.1| glutamate racemase [Prevotella copri DSM 18205]
Length = 278
Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 107/261 (40%), Gaps = 10/261 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L +R MP+Y ++Y+ D+ PYG+ + K +
Sbjct: 8 GPIGVFDSGYGGLTILHGLRQTMPQYDYMYLGDNARAPYGSRSFEVVYKFTRQAVLKLFS 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ CNTA L+ PS LG + P + T+S + +L+
Sbjct: 68 -MGCHLVILGCNTASAKALRSLQQRDIPELDPSRRVLGIIRPTAEVIGTITKSNHVGLLA 126
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + I + + V+ + A+ VE + +KK I+ +
Sbjct: 127 TEGTIKSQSYNMEISKLWPEIQVSGVACPLWAAIVEANEADSPGADYFVKKRIDQ--LML 184
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD- 246
+ D I+L CTHYPL++ + P V + +A + L R + +
Sbjct: 185 KDADIDTIILGCTHYPLLMSSIVKNLPDGVRVVPQGQYVANSLKDYLNRHPQMEQMITKT 244
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+L+ + + + Q F
Sbjct: 245 GSCRYLTTESEDKFKESAQIF 265
>gi|315635708|ref|ZP_07890971.1| glutamate racemase [Arcobacter butzleri JV22]
gi|315480005|gb|EFU70675.1| glutamate racemase [Arcobacter butzleri JV22]
Length = 261
Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 6/228 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL+ + ++ Y+AD PYG + + KR + + +L +Y
Sbjct: 3 VGVFDSGLGGLTVLKSILKVLKNAEIFYIADTAYAPYGEKDSALILKRCEDITNYLLKEY 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ ++ACNTA + LR F S+ +G P IK A T+S I IL+TP+TL+
Sbjct: 63 KIDALIVACNTATSAAIKHLRENFSSLIVIGTEPGIKPAILNTKSSNIGILATPSTLKSD 122
Query: 136 YTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L++ S + + LA ++E+ +I K +E I + + D
Sbjct: 123 KYQLLVNELSSIKKVNLFEQACPGLAMQIEKG----EINTLTTYKMLEEWLIPMKEENVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
IVL CTHYPLI +++ + + D+IA+R L
Sbjct: 179 TIVLGCTHYPLISQTIKKIMGEDITLIQTGDAIAKRLLSLSEEKGHKN 226
>gi|158321093|ref|YP_001513600.1| glutamate racemase [Alkaliphilus oremlandii OhILAs]
gi|158141292|gb|ABW19604.1| glutamate racemase [Alkaliphilus oremlandii OhILAs]
Length = 274
Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 6/228 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG+ VL + +P +IY D PYG +KK + +L
Sbjct: 9 PIGVFDSGVGGISVLADLIHQLPNEQYIYFGDSGNAPYGVRSKEEVKKLSFNVVDKLL-N 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA +++ +ELR + +G PA+K A G I +++TP TLR
Sbjct: 68 FNIKAVVVACNTATSIVIEELRKRL-DIPVIGMEPALKPAIELNNFGKIVVMATPVTLRE 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
++LI + + L +E+ + EI+ I + +
Sbjct: 127 KKFNDLIMKLTDTDRVVKMPCPGLVEIIEQQ----GDHDAEIEAYIRRIYASYQLDTVGT 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+VL CTHY I + ++ +D + AR + LL + T
Sbjct: 183 VVLGCTHYVFIKDMIAKVVGPEATVIDGNFGTARHVKELLKQSEALNT 230
>gi|327312842|ref|YP_004328279.1| glutamate racemase [Prevotella denticola F0289]
gi|326944421|gb|AEA20306.1| glutamate racemase [Prevotella denticola F0289]
Length = 279
Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 11/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + +
Sbjct: 9 GPIGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGSRSFDIVYQFTRQAVMKLF- 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ CNTA ++ P LG + P + T+S + +L+
Sbjct: 68 GLGCQLVILGCNTASAKALRTIQQNDLPALDPDRRVLGVIRPTAEIIGRLTRSRHVGLLA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+R + I + V + +E + +KK I+ I +
Sbjct: 128 TEGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH--IMR 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ D ++L CTHYP+++ + P V + + +A R L R R
Sbjct: 186 IDPQIDCLILGCTHYPILMPKILKHVPCGVRIIPQGEYVAESLRDYLRRHPDMDARCTKQ 245
Query: 246 DDHALFLSGKPDIAMR 261
+ P+
Sbjct: 246 STVKYLTTENPEKFKE 261
>gi|149192517|ref|ZP_01870697.1| glutamate racemase [Vibrio shilonii AK1]
gi|148833649|gb|EDL50706.1| glutamate racemase [Vibrio shilonii AK1]
Length = 266
Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 11/257 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +ILIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R L ++
Sbjct: 3 RKNILIFDSGVGGLSVFKEIVQRLPQENYIYLFDNEAYPYGELAPETLVNRTCTLIQQMM 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA T++ LR + +G VPAIK A+ +++ + +++TPAT+
Sbjct: 63 RRKAVDIVVIACNTASTIVLPHLRKRI-DIPVVGVVPAIKPASLLSKT-AVGLIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT +LI ++ + + L+ L E+ ++ E+ + +
Sbjct: 121 TRQYTHDLIRNFATDKEVKLIGDSRLVEMAEQKLRNEQVDLQEL-----ELILSPIKGKI 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI + V+ +D+ +IARR LL + F
Sbjct: 176 DVAVLGCTHFPLIKEEIALVLGDCVELVDSGAAIARRVESLLEIKE--ASLGQGTMEAFS 233
Query: 253 SGKP--DIAMRRLMQGF 267
S P + A+ + ++
Sbjct: 234 SAPPFEEEALNKTLRQL 250
>gi|170782455|ref|YP_001710788.1| glutamate racemase [Clavibacter michiganensis subsp. sepedonicus]
gi|169157024|emb|CAQ02197.1| glutamate racemase 1 [Clavibacter michiganensis subsp. sepedonicus]
Length = 294
Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 92/239 (38%), Gaps = 6/239 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + L+P IY+ D PYG+ +++ + + D++
Sbjct: 3 DAPIGIFDSGVGGLTVARAVAALLPRESIIYIGDTAHTPYGDKPIADVRRYALAVLDDLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA + + R + PA++ A + T++ + +++T AT+
Sbjct: 63 ERG-VKMLVIACNTASAAMLRDARERYDIPVVEVIQPAVRTAVSVTRNHRVGVIATHATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + VE E+ EG
Sbjct: 122 TSRAYDDAFAA-APHLALTSAEAPDFVGFVERGETSGP----ELMSAAEGYLAPLRAAGV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYP + + V + + A+ L + +
Sbjct: 177 DTLVLGCTHYPFLEGAISLIMGPDVTLVSSDTETAKDVYRELVSAGLERRSDAPPVIRY 235
>gi|114331729|ref|YP_747951.1| glutamate racemase [Nitrosomonas eutropha C91]
gi|114308743|gb|ABI59986.1| glutamate racemase [Nitrosomonas eutropha C91]
Length = 268
Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 8/254 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN + IFDSGIGGL V +K+R L+P +YVAD + PYG D+ + +
Sbjct: 1 MDNKYIASF--GPVGIFDSGIGGLSVARKIRELLPSEDMVYVADSLHAPYGEKSDNYIFQ 58
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R+ + +L + V+ACNTA T LR+ +P + +G P IK AA T +G+
Sbjct: 59 RMGAVTEFLLARKA-KAVVVACNTATTAAISRLRACYP-IPIVGVEPGIKPAALSTHTGV 116
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+TP TL+ + L + I + L +++E + D+ ++
Sbjct: 117 IGVLATPRTLQTNSFTALAERFARNVRIEIQPCPDLVTKIEA----LNFNSDQTIALLKQ 172
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
K D IVL CTHY + + +++ + + ++A+ L
Sbjct: 173 YISPLLDKGADTIVLGCTHYNHLSELISKVAGENISIIKTDAAVAKEVARRLSSGGLLAG 232
Query: 243 RVFDDHALFLSGKP 256
F + P
Sbjct: 233 GDHAGSEEFWTSGP 246
>gi|170718701|ref|YP_001783892.1| glutamate racemase [Haemophilus somnus 2336]
gi|189030361|sp|B0URZ3|MURI_HAES2 RecName: Full=Glutamate racemase
gi|168826830|gb|ACA32201.1| glutamate racemase [Haemophilus somnus 2336]
Length = 267
Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 4/241 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +IL FDSG+GGL V ++ + L+P+ H++Y D+ FPY ++ + R + + I
Sbjct: 5 IQPTILFFDSGVGGLSVYKETKQLLPDCHYLYGFDNGFFPYSEKDEKDIIDRTLRICQKI 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L VIACNTA T++ ELR F S+ +G VPAIK AA +++ I +++T T
Sbjct: 65 NQTYPLDLIVIACNTASTVVLPELRRNF-SIPIVGTVPAIKPAAEMSETKHIGLIATKGT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++RTY ++LI +Y C + + S L E+ G ++ + +K+E+ K K
Sbjct: 124 IKRTYVNDLIKNYAYHCMVEKIGSTKLVEIAEQKLRGGEVDLNVLKQELSPW---KTMKS 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PLI P ++ + +IA+R + LL I +
Sbjct: 181 LDSVVLGCTHFPLIKEEIECCLPQVKFFVSSGKAIAKRVKFLLKGIEVRSKIQKKNLIFC 240
Query: 252 L 252
Sbjct: 241 T 241
>gi|309803584|ref|ZP_07697676.1| glutamate racemase [Lactobacillus iners LactinV 11V1-d]
gi|309806029|ref|ZP_07700055.1| glutamate racemase [Lactobacillus iners LactinV 03V1-b]
gi|312872868|ref|ZP_07732930.1| glutamate racemase [Lactobacillus iners LEAF 2062A-h1]
gi|312873716|ref|ZP_07733761.1| glutamate racemase [Lactobacillus iners LEAF 2052A-d]
gi|325913753|ref|ZP_08176114.1| glutamate racemase [Lactobacillus iners UPII 60-B]
gi|308164332|gb|EFO66587.1| glutamate racemase [Lactobacillus iners LactinV 11V1-d]
gi|308167632|gb|EFO69785.1| glutamate racemase [Lactobacillus iners LactinV 03V1-b]
gi|311090714|gb|EFQ49113.1| glutamate racemase [Lactobacillus iners LEAF 2052A-d]
gi|311091602|gb|EFQ49984.1| glutamate racemase [Lactobacillus iners LEAF 2062A-h1]
gi|325476953|gb|EGC80104.1| glutamate racemase [Lactobacillus iners UPII 60-B]
Length = 261
Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 17/265 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ +
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L K + + CNTA ++ P M +G + A+ TQ+
Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++++T AT+ I +Q + + LA VE K +
Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEANPSDKIK-----KAVVA 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
C + + D ++L CTHYPL++ + +D +D +A+ +L R N
Sbjct: 166 QCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLA 225
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQG 266
+ H + +G P M+ +
Sbjct: 226 EK-GGKHEYYTTGDPIKFMKIAQKW 249
>gi|15896495|ref|NP_349844.1| glutamate racemase [Clostridium acetobutylicum ATCC 824]
gi|20177983|sp|Q97E66|MURI_CLOAB RecName: Full=Glutamate racemase
gi|15026324|gb|AAK81184.1|AE007821_1 Possible glutamate racemase [Clostridium acetobutylicum ATCC 824]
gi|325510654|gb|ADZ22290.1| glutamate racemase [Clostridium acetobutylicum EA 2018]
Length = 256
Score = 267 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 6/229 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GG+ VL++ +P +FIY D PYG ++ + +L
Sbjct: 5 NNPIGVIDSGVGGISVLKEAVKQLPYENFIYYGDSKNAPYGIKSVDEVRNLTFNVVEKLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K V+ACNTA + DELR + ++ +G PA+K A + G I I++TP TL
Sbjct: 65 -KLNIKALVVACNTATSAAIDELREKYKNIPVIGIEPALKPAVELKRRGKIIIMATPMTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
NL+ Y I + L +E+ ++ +++++ + F + E
Sbjct: 124 SEVKFKNLMEKYEKDSEIVKLPCPGLVELIEDGI----VEGEKMQEYLRNKFKDYEKDDI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
VL CTHYP + ++ V +D S + + L + +
Sbjct: 180 AAFVLGCTHYPFVKKEIASIA-RDVPIIDGSQGTVMQLKRKLDKYDILN 227
>gi|217969659|ref|YP_002354893.1| glutamate racemase [Thauera sp. MZ1T]
gi|217506986|gb|ACK53997.1| glutamate racemase [Thauera sp. MZ1T]
Length = 268
Score = 267 bits (685), Expect = 9e-70, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 7/257 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL V++ + +P +Y D PYG ++ + +L
Sbjct: 6 RPIGVFDSGVGGLTVVRALMERLPLEDIVYFGDTARVPYGVKSVATIEHFTAQITEFLLQ 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPATL 132
+ + +IACNT + D + + L + + A A + I ++ TP T+
Sbjct: 66 R-DVKMLIIACNTMAAVAADVVHRLAAGIPVLDVIEAGARAAVAASPGRRIGVIGTPTTI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +H ++ + + VEE ++ ++ + E
Sbjct: 125 NSNAYARRMHELDPAVRVYSQACPLFVPLVEEGWLDHEVTRLTAQEYLRPVLAE----EV 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D +VL CTHYPL+ + R ++ V +D++ + A A L + D+
Sbjct: 181 DSLVLGCTHYPLLKPLLRDVAGARVRLIDSALTTAELAAERLQLSGLARGGGGVADYRFV 240
Query: 252 LSGKPDIAMRRLMQGFG 268
+S P + G
Sbjct: 241 VSDVPLRFQTIGERFLG 257
>gi|7387915|sp|P56868|MURI_AQUPY RecName: Full=Glutamate racemase
gi|6707573|gb|AAF25672.1|AF212972_1 glutamate racemase [Aquifex pyrophilus]
Length = 254
Score = 267 bits (685), Expect = 9e-70, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 15/239 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R + +Y+ D PYG + + + + DK
Sbjct: 3 IGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA + L+ F P +K+A +++ I ++ TPAT++
Sbjct: 63 -VDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + + EE +I +K +E E +GK D +
Sbjct: 122 AYQRKLEE--GGADVFAKACPLFVPLAEEGLLEGEIT----RKVVEHYLKEFKGK-IDTL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+L CTHYPL+ ++ V+ +D+S++++ L N + LF +
Sbjct: 175 ILGCTHYPLLKKEIKKFLG-DVEVVDSSEALS------LSLHNFIKDDGSSSLELFFTD 226
>gi|315653048|ref|ZP_07905976.1| glutamate racemase [Lactobacillus iners ATCC 55195]
gi|315489583|gb|EFU79217.1| glutamate racemase [Lactobacillus iners ATCC 55195]
Length = 261
Score = 267 bits (685), Expect = 9e-70, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 17/265 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ +
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L K + + CNTA ++ P M +G + A+ TQ+
Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++++T AT+ I +Q + + LA VE K +
Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEANPSDKIK-----KAVVA 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
C + + D ++L CTHYPL++ + +D +D +A+ +L R N
Sbjct: 166 QCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLL- 224
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQG 266
H + +G P M+ +
Sbjct: 225 GEKGGKHEYYTTGDPIKFMKIAQKW 249
>gi|259501297|ref|ZP_05744199.1| glutamate racemase [Lactobacillus iners DSM 13335]
gi|302190979|ref|ZP_07267233.1| glutamate racemase [Lactobacillus iners AB-1]
gi|312870760|ref|ZP_07730867.1| glutamate racemase [Lactobacillus iners LEAF 3008A-a]
gi|259167267|gb|EEW51762.1| glutamate racemase [Lactobacillus iners DSM 13335]
gi|311093772|gb|EFQ52109.1| glutamate racemase [Lactobacillus iners LEAF 3008A-a]
Length = 261
Score = 267 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 17/265 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ +
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L K + + CNTA ++ P M +G + A+ TQ+
Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++++T AT+ I +Q + + LA VE K +
Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEANPSDKIK-----KAVVA 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
C + + D ++L CTHYPL++ + +D +D +A+ +L R N
Sbjct: 166 QCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLA 225
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQG 266
+ H + +G P M+ +
Sbjct: 226 AK-GGKHEYYTTGDPIKFMKIAQKW 249
>gi|284037266|ref|YP_003387196.1| glutamate racemase [Spirosoma linguale DSM 74]
gi|283816559|gb|ADB38397.1| glutamate racemase [Spirosoma linguale DSM 74]
Length = 280
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 102/273 (37%), Gaps = 16/273 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
I +FDSG GGL VL+++ +P+Y +IY+ D+ PYG + +
Sbjct: 1 MPTPSQPIGVFDSGYGGLTVLREIVKKLPQYDYIYLGDNARTPYGTRSFDTVYHYTLECV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTF----------PSMAFLGAV-PAIKQAAAY 117
+ D+ L ++ACNTA ++ P LG + P + Y
Sbjct: 61 QHLFDRG-CRLVILACNTASAKALRNIQQLDLPAQYPGLDGPDRRVLGVIRPTTEVIGTY 119
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+++G + +L+T T+ I + + + + VE + +K
Sbjct: 120 SKTGKVGVLATRGTVTSESYRVEIEKFFPGLGVFQEACPMWVPLVENGEYDSPGADYFVK 179
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
+ I+ + D ++LACTHYPL++ + +P L ++ L R
Sbjct: 180 QHIDRLLA--QSPDIDTLLLACTHYPLLLEKIKHFAPSGATILSQGGIVSDSLADYLVRH 237
Query: 238 N--THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
Q + + R+ +G
Sbjct: 238 PEIEAQCSKHGQRTFLTTDATEDFDRQATIFYG 270
>gi|188587547|ref|YP_001919512.1| glutamate racemase [Clostridium botulinum E3 str. Alaska E43]
gi|229486234|sp|B2UX89|MURI_CLOBA RecName: Full=Glutamate racemase
gi|188497828|gb|ACD50964.1| glutamate racemase [Clostridium botulinum E3 str. Alaska E43]
Length = 258
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 5/233 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I FDSG+GGL V+++ LMP ++IY D PYG ++
Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAIRLMPNENYIYFGDSKNAPYGIKTVEEVRTLTFNAVES 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L+K V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP
Sbjct: 63 LLEK-NVKAIVVACNTATSAAIDLVRSKYKNIPIIGIEPALKLATKYNRKGNIIIMATPM 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ +L+ Y I + L +E + E+ +K++ + +
Sbjct: 122 TLKEKKFKSLMEKYGENYDIVSLPCAKLVEFIEHGILSGEELEEYLKEKFKSY----KNN 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
V+VL CTHYP I ++ + +D ++ R L N T
Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTE 230
>gi|145636801|ref|ZP_01792467.1| glutamate racemase [Haemophilus influenzae PittHH]
gi|145270099|gb|EDK10036.1| glutamate racemase [Haemophilus influenzae PittHH]
Length = 257
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 5/252 (1%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GG + ++ + L+P +H++Y D+ GFPY E+ ++ R + I +Y
Sbjct: 3 SGVGGFSIYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAACQLINQRYPLDAI 62
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T T++R Y L
Sbjct: 63 VIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATKGTVKRHYIDEL 121
Query: 141 IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
I + C + + + L E+ G + +K E+ D +VL CT
Sbjct: 122 IDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AGMADLDTLVLGCT 178
Query: 201 HYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA- 259
H+PLI + P ++D S +IA+R + LL N + + P+ +
Sbjct: 179 HFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQNEKYNQMFCTAHFPEESQ 238
Query: 260 MRRLMQGFGLKS 271
++ + +G +S
Sbjct: 239 FKKALHLWGFES 250
>gi|88799058|ref|ZP_01114639.1| glutamate racemase [Reinekea sp. MED297]
gi|88778285|gb|EAR09479.1| glutamate racemase [Reinekea sp. MED297]
Length = 257
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 76/256 (29%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL +R L+P+ IYVAD PYG+ + + +R + ++++
Sbjct: 2 IGVFDSGLGGLTVLNSIRSLLPDQALIYVADQAYTPYGDQSEATVTQRSREISQWLIEQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA + D+LR F S+ +G P +K AA +++ I IL+T T+
Sbjct: 62 -CQLIVIACNTATAIAIDQLRREF-SVPIVGVEPGVKPAALLSRTRKIGILATENTVASQ 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +++ + LA +E + I ++ + D +
Sbjct: 120 RYQRLIQAFLPNVQVISQGCSGLADAIES-------DPEAIPALLQKYLCPLLDEGVDQV 172
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYPLI QL+ +D SD+IA R LP + D + +
Sbjct: 173 VLGCTHYPLIRSQIEQLAGARARVIDTSDAIAMEVRRRLP---AKTSNDVVDVRWYTTKF 229
Query: 256 PDIAMRRLMQGFGLKS 271
RL LK+
Sbjct: 230 DASQAGRLQHYDQLKA 245
>gi|309809660|ref|ZP_07703516.1| glutamate racemase [Lactobacillus iners SPIN 2503V10-D]
gi|308170020|gb|EFO72057.1| glutamate racemase [Lactobacillus iners SPIN 2503V10-D]
Length = 261
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 19/266 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ +
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L K + + CNTA ++ P M +G + A+ TQ+
Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EI 180
+++++T AT+ I +Q + + LA VE D+IKK +
Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN------PSDKIKKVVV 164
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
C + + D ++L CTHYPL++ + +D +D +A+ +L R N
Sbjct: 165 AQCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLL 224
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQG 266
+ H + +G P M+ +
Sbjct: 225 AEK-GGKHEYYTTGDPIKFMKIAQKW 249
>gi|170740490|ref|YP_001769145.1| glutamate racemase [Methylobacterium sp. 4-46]
gi|168194764|gb|ACA16711.1| glutamate racemase [Methylobacterium sp. 4-46]
Length = 290
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 102/252 (40%), Positives = 151/252 (59%), Gaps = 3/252 (1%)
Query: 6 YPCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
P + +L+FDSG+GGL VL ++R P+ +Y ADD FPYG+ + L R+
Sbjct: 12 APLAPGPRAPAVLVFDSGLGGLTVLSELRRARPDARIVYAADDAAFPYGDLSEEMLVARV 71
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + ++ + P L V+ACNTA TL+ LR+ F ++ F+G VPAIK AAA T++G IS
Sbjct: 72 VAVMERLVAAHAPDLVVVACNTATTLVLPALRARF-AVPFVGTVPAIKPAAAATRTGRIS 130
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+TP T+RR YT LI +Y C + LV + LA+ E G + +D +++EI CF
Sbjct: 131 VLATPGTVRRDYTRELIDAYAGTCAVTLVGATRLAALAEADLAGCPVDDDVLREEIAPCF 190
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTR 243
+ + RTDV+VL CTHYPL++ F +L+PWPV W+D + ++ARR LL P
Sbjct: 191 VGEGSARTDVVVLGCTHYPLLLARFERLAPWPVTWIDPAPAVARRMAALLGPAPRGTDPE 250
Query: 244 VFDDHALFLSGK 255
A+F G+
Sbjct: 251 ATPGLAVFTGGE 262
>gi|295676105|ref|YP_003604629.1| glutamate racemase [Burkholderia sp. CCGE1002]
gi|295435948|gb|ADG15118.1| glutamate racemase [Burkholderia sp. CCGE1002]
Length = 295
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 9/245 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + +
Sbjct: 21 APIGIFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFITDRTLAIGEWLAA 80
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA +R P + +G P +K AA ++S + +L+T ATLR
Sbjct: 81 RGAKAL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKSRVAGVLATQATLR 138
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ Y + C L VE + E++ + D
Sbjct: 139 SARFQGLLERYAADCRFLCQPGHGLVQAVER----CDVGSAELRALLRSYLQPMLDAGAD 194
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---AL 250
+VL CTHYP + R + + +D S +IAR+ +L +
Sbjct: 195 TLVLGCTHYPFLDAAIRDIVGERLALIDTSVAIARQLERVLEQHGLRAATPAASTPLPRF 254
Query: 251 FLSGK 255
+ +
Sbjct: 255 YSTDD 259
>gi|55981612|ref|YP_144909.1| glutamate racemase [Thermus thermophilus HB8]
gi|81600355|sp|Q5SHT7|MURI_THET8 RecName: Full=Glutamate racemase
gi|55773025|dbj|BAD71466.1| glutamate racemase [Thermus thermophilus HB8]
Length = 257
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 17/260 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I +FDSG+GGL VL+ +R L+P F+Y D PYG +++ +
Sbjct: 1 MKDPKAPIGVFDSGVGGLTVLKALRRLLPREEFLYFGDTARVPYGGKPLAMVRRFAWEIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+L + V+ACNTA + +L F PA + A + + + ++ T
Sbjct: 61 GFLL-RQGVKAIVVACNTASSAALPDLAEDLSVPVFGVVEPAARAARGFRK---VGLIGT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + VEE + +D + + ++E
Sbjct: 117 QATVESGAYPRYVDLA------WAKACPLFVPLVEEG-----LWDDPVALLVARHYLEDA 165
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
K + ++L CTHYP + + P V LD+++ A+ L
Sbjct: 166 PKDLEALILGCTHYPFLKGAIGAVLP-GVALLDSAELTAQEVARALEAEGLLNPEGRGRT 224
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
++G P+ A R L + G
Sbjct: 225 FHLVTGDPE-AYRALAERLG 243
>gi|308270889|emb|CBX27499.1| Glutamate racemase [uncultured Desulfobacterium sp.]
Length = 266
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 5/232 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL V++ + +P Y IY D PYG+ + + + +L
Sbjct: 7 IGIFDSGIGGLTVVKAVMGKIPGYDIIYFGDTARTPYGSKSSETVIQYAIEDTEFLL-NN 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++ D + F F PA++ A ++ I ++ T AT++
Sbjct: 66 GANIIVVACNTASSVATDSIVKKFDVPVFEVITPAVELAVESSRKMSIGVIGTRATVKSC 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
N I + + I+ V+ +L VEE +KK + + K+ D +
Sbjct: 126 VYENKIKAINAGAKIYSVACPLLVPLVEEGWINRPETSMIVKKYLHS----LKVKQIDTL 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+L CTHYPL+ H+ + V+ +D+S +A + L +R+ +
Sbjct: 182 ILGCTHYPLLKHIICRKIGKRVNIIDSSLGVADKLEKFLQEHPDIGSRLGKN 233
>gi|227529708|ref|ZP_03959757.1| glutamate racemase [Lactobacillus vaginalis ATCC 49540]
gi|227350374|gb|EEJ40665.1| glutamate racemase [Lactobacillus vaginalis ATCC 49540]
Length = 266
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 52/253 (20%), Positives = 109/253 (43%), Gaps = 15/253 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V++ ++ +P ++V D+ FPYG +++
Sbjct: 1 MDNRP--------IGVMDSGLGGLSVIRVIQQELPNESVVFVGDEGHFPYGTKSQELIRQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
++ + ++ + L VIACNTA ++ P + +G + AA +++
Sbjct: 53 LVLRIGRFLVAQ-PVKLMVIACNTATAAALSTVQKELP-IPVIGVINPGATAAIESKASR 110
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++T +T + + + ++ L + VE G E +K ++
Sbjct: 111 IGVIATESTTKDGAYVRELKKLDPHVKVISKATQPLVAIVEHGKTGT----AEAQKTVDQ 166
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ + D ++L CTH+P + + Q V +D + + + LL +
Sbjct: 167 QLASFDQEPVDALILGCTHFPFLANEISQKMGKKVKLIDPALETVNQVKKLLTAEHLLAQ 226
Query: 243 RVFDDHALFLSGK 255
+ + L+ +G
Sbjct: 227 QAV-SYKLYSTGD 238
>gi|192359030|ref|YP_001982653.1| glutamate racemase [Cellvibrio japonicus Ueda107]
gi|190685195|gb|ACE82873.1| glutamate racemase [Cellvibrio japonicus Ueda107]
Length = 279
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 86/247 (34%), Positives = 132/247 (53%), Gaps = 2/247 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL V Q+++ +P IY +D+ FPYG E+ L R+ + + +L Y
Sbjct: 16 ILVFDSGVGGLSVAQEIQASLPGVALIYASDNAAFPYGTKEEGELIARVERVMAALLASY 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA TL LR F ++ F+G VPAIK AA +QSG+I +L+TPAT+ R
Sbjct: 76 PVDLVVVACNTASTLTLPHLRQRF-NLPFVGVVPAIKPAAESSQSGVIGLLATPATVARP 134
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI ++ S C + + S L E+ G I + I + ++ D +
Sbjct: 135 YTHDLITTHASDCTVISLGSSELVLLAEQKLRGETITDKAIAPITQALLDADGSRQMDRL 194
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALFLSG 254
VLACTH+PL+ + P + +D+ +IARR + LL + + +H +
Sbjct: 195 VLACTHFPLLREELGRNLPQRIQLIDSGAAIARRVKHLLEAQQRLARLPDTPEHIAVFTQ 254
Query: 255 KPDIAMR 261
+ R
Sbjct: 255 ETQEVHR 261
>gi|314984207|gb|EFT28299.1| glutamate racemase [Propionibacterium acnes HL005PA1]
Length = 284
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 10/265 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VE+ E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + + +S AR + L+ + D
Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGAAPALISSSQQCARASYSLMAESGLLHSHPRD 237
Query: 247 DHALF-LSGKPDIAM---RRLMQGF 267
F +G + RRLM+GF
Sbjct: 238 SSRYFLTTGNAERFEKLGRRLMEGF 262
>gi|94311212|ref|YP_584422.1| glutamate racemase [Cupriavidus metallidurans CH34]
gi|93355064|gb|ABF09153.1| glutamate racemase [Cupriavidus metallidurans CH34]
Length = 270
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 6/254 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ + IFDSG+GGL VL+++R L+P +Y AD PYG + ++ R + + ++
Sbjct: 4 SPVGIFDSGLGGLSVLREVRALLPHESLLYFADSRYAPYGEKPERFVEARTLQVCEWLVA 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA LR ++ +G P +K AAA ++S ++ +L+T TL+
Sbjct: 64 QGCKAL-VIACNTATMHAVQTLRERL-AVPIIGVEPGLKPAAAASRSKVVGVLATANTLK 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ S ++ + + L +E+ + D +++ + D
Sbjct: 122 SAKFNRLLTSLGNESRFLCEAGVGLVPLIEQG----DVSSDTVRQTLGTLLSPMLEAGAD 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + L + +D +IAR+ L + + +LS
Sbjct: 178 TLVLGCTHYPFLSETIDDLVDGRLALIDTGVAIARQLARKLAEFDLAASPDTAPSVRYLS 237
Query: 254 GKPDIAMRRLMQGF 267
K +R +
Sbjct: 238 TKDAAHLREMAAAL 251
>gi|89889534|ref|ZP_01201045.1| glutamate racemase [Flavobacteria bacterium BBFL7]
gi|89517807|gb|EAS20463.1| glutamate racemase [Flavobacteria bacterium BBFL7]
Length = 262
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 6/240 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I FDSG+GG V +++ L+P + IY+AD PYG + + + +L
Sbjct: 5 QPIGFFDSGVGGTSVWKEVVQLLPHENTIYLADSKHAPYGRKSKEEITQLCIKNTEYLLS 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L + CNTA T LR + + F+G PAIK AA + +G + IL+T TL
Sbjct: 65 RG-CKLIAVPCNTATTNSISYLRGHY-DIPFIGIEPAIKPAALNSATGKVGILATKGTLT 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ ++ + + + +E K +E++ + D
Sbjct: 123 SELFNRTQRAFTKDVNTIEIVGTGIVELIESG----KKDSEEMRNLLVSITEPFMISGID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL C+HYP I + ++L P V +D+ ++AR+ +L N ++ H S
Sbjct: 179 YLVLGCSHYPYIKDMLQELLPSRVKIIDSGAAVARQTYHILKEFNLLNDQISSGHHELFS 238
>gi|170769670|ref|ZP_02904123.1| glutamate racemase [Escherichia albertii TW07627]
gi|170121478|gb|EDS90409.1| glutamate racemase [Escherichia albertii TW07627]
Length = 262
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 84/256 (32%), Positives = 140/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V +++R L+P+ H+IY D+V FPYG + + +R++ + + + + Y
Sbjct: 2 LVFDSGVGGLSVYEEIRRLLPDLHYIYAFDNVAFPYGEKSEEFVVERVVEIVTAVQEHYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G I D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDISLDALKRILRPWLRMKEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPEAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G K+
Sbjct: 239 EAEQLLPVLQRYGFKT 254
>gi|317057059|ref|YP_004105526.1| glutamate racemase [Ruminococcus albus 7]
gi|315449328|gb|ADU22892.1| glutamate racemase [Ruminococcus albus 7]
Length = 273
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 6/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL ++++ L+P +Y+ D PYG + + + L
Sbjct: 3 NSPIGVFDSGVGGLTCVKELTKLLPHEDIVYLGDTARVPYGTRSKETIARYTAQDM-EFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ + ++AC TA ++I + + + G V PA A A T++G I +++T A
Sbjct: 62 RGHDVKMILVACGTASSVIMSSPEFSGNTEPSYSGVVKPAANAACAATKNGRIGVIATGA 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R +I S + + + VE G + E + +
Sbjct: 122 TIRSGSYGKVIRSIDPDAKVIGKACPMFVPLVENGYVGK--DCIPTRYFAEEYLECMKRE 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR-RARCLLPRINTHQTRVFDDHA 249
+ D ++L CTHYPL+ + + V + +AR + L +
Sbjct: 180 QVDTLILGCTHYPLLADLISDIMGDGVKLISAGAELARFAVKTLTFSDSLADREEQGTQK 239
Query: 250 LFLSGKPDIAMRRLMQGFG 268
LF + P++ + + G
Sbjct: 240 LFCTDTPELFSENVERFLG 258
>gi|53716293|ref|YP_106352.1| glutamate racemase [Burkholderia mallei ATCC 23344]
gi|121598002|ref|YP_990396.1| glutamate racemase [Burkholderia mallei SAVP1]
gi|124381855|ref|YP_001024891.1| glutamate racemase [Burkholderia mallei NCTC 10229]
gi|126446746|ref|YP_001079232.1| glutamate racemase [Burkholderia mallei NCTC 10247]
gi|167002077|ref|ZP_02267867.1| glutamate racemase [Burkholderia mallei PRL-20]
gi|254176068|ref|ZP_04882726.1| glutamate racemase [Burkholderia mallei ATCC 10399]
gi|254356026|ref|ZP_04972303.1| glutamate racemase [Burkholderia mallei 2002721280]
gi|52422263|gb|AAU45833.1| glutamate racemase [Burkholderia mallei ATCC 23344]
gi|121225800|gb|ABM49331.1| glutamate racemase [Burkholderia mallei SAVP1]
gi|126239600|gb|ABO02712.1| glutamate racemase [Burkholderia mallei NCTC 10247]
gi|148025009|gb|EDK83178.1| glutamate racemase [Burkholderia mallei 2002721280]
gi|160697110|gb|EDP87080.1| glutamate racemase [Burkholderia mallei ATCC 10399]
gi|243062233|gb|EES44419.1| glutamate racemase [Burkholderia mallei PRL-20]
gi|261826533|gb|ABM98669.2| glutamate racemase [Burkholderia mallei NCTC 10229]
Length = 290
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 66/276 (23%), Positives = 112/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R + + +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLLDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + ++ + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|229821218|ref|YP_002882744.1| glutamate racemase [Beutenbergia cavernae DSM 12333]
gi|259509810|sp|C5BY82|MURI_BEUC1 RecName: Full=Glutamate racemase
gi|229567131|gb|ACQ80982.1| glutamate racemase [Beutenbergia cavernae DSM 12333]
Length = 292
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 103/269 (38%), Gaps = 19/269 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +YV D PYG +++ + + ++
Sbjct: 3 DAPIGIFDSGVGGLTVARAVLDQLPHESVLYVGDTARTPYGPRPIAQVREYSLEILDSLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L VIACN+A + + R + + + + PA+++AAA T++G I ++ T
Sbjct: 63 ASGVKAL-VIACNSASAAMLADARERYEGDGVPVVEVIRPAVRRAAAATRNGRIGVIGTR 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + + Q +H + VE+ +
Sbjct: 122 ATISSRAYEDAFAA-APQLQLHTRACPDFVELVEDGETSGP----AVLASAHAYLDPLRD 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT------- 242
D +VL CTHYPL+ + V + +++ A L + ++
Sbjct: 177 AGVDTLVLGCTHYPLLAGAISYVMGEGVTLVSSAEETALDVYRTLVAHDLLRSADGARGD 236
Query: 243 ---RVFDDHALFLSGKPDIAMRRLMQGFG 268
R H +G P R + G
Sbjct: 237 DGARSAPRHRFLATGDPAAFTRLARRFLG 265
>gi|154491820|ref|ZP_02031446.1| hypothetical protein PARMER_01441 [Parabacteroides merdae ATCC
43184]
gi|154088061|gb|EDN87106.1| hypothetical protein PARMER_01441 [Parabacteroides merdae ATCC
43184]
Length = 278
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 11/248 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG GGL + K+R MP Y +IY+ D+ PYG + + + +
Sbjct: 7 GPIGIFDSGYGGLTIFDKIRAAMPGYDYIYLGDNARSPYGTRSFEVVYRFTKQAVETLFN 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ L ++ACNTA ++ P+ LG + P ++ ++S + IL
Sbjct: 67 EG-CQLVILACNTASAKALRTIQQRDLPQWDPARRVLGVIRPTVELMDKISKSKHVGILG 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ S I + + + VE + ++K +E
Sbjct: 126 TTGTITSDSYSLEIKKMFPHMTVTGEACPMWVPLVENNEFDSPGADYFVRKHLEHILAA- 184
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245
D +VL CTHYPL++ + P + + +A L R R+
Sbjct: 185 -DPEIDTLVLGCTHYPLLIEKIKAFLPEGITLFSQGEYVAASLTDYLRRHPEMDIRLTKQ 243
Query: 246 DDHALFLS 253
+ +
Sbjct: 244 GNCRFLTT 251
>gi|303256754|ref|ZP_07342768.1| glutamate racemase [Burkholderiales bacterium 1_1_47]
gi|330999103|ref|ZP_08322824.1| glutamate racemase [Parasutterella excrementihominis YIT 11859]
gi|302860245|gb|EFL83322.1| glutamate racemase [Burkholderiales bacterium 1_1_47]
gi|329575492|gb|EGG57031.1| glutamate racemase [Parasutterella excrementihominis YIT 11859]
Length = 265
Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 7/242 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V+ +R +P IY D + PYG+ +K+R + + ++ K
Sbjct: 1 MFDSGLGGLSVMHAVRDALPGEDIIYYGDCLYAPYGDRNSEYIKERCLAIGRFLISKGA- 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V++CNTA + +R TF + +G PAIK AAA T++G++ +++T T+
Sbjct: 60 KAIVVSCNTATAEGVNTMRDTF-DIPIIGIEPAIKPAAAATKTGVVGVIATTRTITSERY 118
Query: 138 SNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
L+ + + + V L VE +K IE + D +V
Sbjct: 119 LRLVREFAGTKVKVVSVPCPGLMECVESGDWDSFKT----QKLIEKYLHPIKRAGADKLV 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYP + +V ++ + +D S ++AR + L + ++SG
Sbjct: 175 LGCTHYPFLSNVLKRELGSGTELIDPSAAVARELKHQLSKRGLLSDGAKGKEVFYISGDA 234
Query: 257 DI 258
+
Sbjct: 235 EK 236
>gi|241895985|ref|ZP_04783281.1| glutamate racemase [Weissella paramesenteroides ATCC 33313]
gi|241870716|gb|EER74467.1| glutamate racemase [Weissella paramesenteroides ATCC 33313]
Length = 277
Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 107/270 (39%), Gaps = 19/270 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN +I DSGIGGL V+++ +P+ Y+ D PYG +KK
Sbjct: 1 MDNR--------AIGYLDSGIGGLSVVKQALKQLPDEQVYYIGDTARMPYGPRTSDEVKK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
L +++K L V+ACNTA D+L P + +G + P + A+ T+S
Sbjct: 53 FTWQLVDFLMEK-DIKLLVVACNTATAATLDDLIKYLP-IPVVGVIQPGVDAASQVTESN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I I++T T+ + + + H+ +++ L E+ E + + +
Sbjct: 111 NIGIIATQGTVNSMAYYDGLKKINADFHVLQLATPTLVKIAEQPEKN----ELTVNQVVT 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RI 237
+ + D +VL CTH+PL+ ++ V +D S +L R
Sbjct: 167 KVLLPIKASGIDTLVLGCTHFPLLAKFIQESVGEQVKLVDPGTSTIAAVAQILDDFKIRH 226
Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + + F +G I
Sbjct: 227 ESTNGQKRNLDKYFTTGDQKIFDLLAENWL 256
>gi|218296251|ref|ZP_03497007.1| glutamate racemase [Thermus aquaticus Y51MC23]
gi|218243323|gb|EED09853.1| glutamate racemase [Thermus aquaticus Y51MC23]
Length = 257
Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 56/262 (21%), Positives = 110/262 (41%), Gaps = 17/262 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + I +FDSG+GGL VL ++ +P+ F+Y D PYG+ +++ +
Sbjct: 1 MRNPKAPIGVFDSGVGGLTVLTALKKALPQEDFLYFGDTARVPYGSKPLSVVRRFAWEIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+L + V+ACNTA + +L S+ G + Q A + + ++ T
Sbjct: 61 GFLL-REGVKAIVVACNTASSAALPDLAEDL-SVPVFGVLEPAAQVAQGYR--KVGLIGT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + VEE + +D + I ++E+
Sbjct: 117 QATVGSRAYERYVDLS------WAKACPLFVPLVEEG-----LWDDPVALLIARHYLEEA 165
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ + ++L CTHYP + Q+ P V +D++++ A R L
Sbjct: 166 PEDLEALILGCTHYPYLKRTIAQVLP-GVKLIDSAEATAGRVAEALAAEGLLNPEGRGQV 224
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
+++G P+ + R L + G++
Sbjct: 225 VHYVTGDPE-SYRALAERLGVR 245
>gi|238561735|ref|ZP_00441552.2| glutamate racemase [Burkholderia mallei GB8 horse 4]
gi|254203335|ref|ZP_04909696.1| glutamate racemase [Burkholderia mallei FMH]
gi|254205214|ref|ZP_04911567.1| glutamate racemase [Burkholderia mallei JHU]
gi|147745574|gb|EDK52653.1| glutamate racemase [Burkholderia mallei FMH]
gi|147754800|gb|EDK61864.1| glutamate racemase [Burkholderia mallei JHU]
gi|238523998|gb|EEP87433.1| glutamate racemase [Burkholderia mallei GB8 horse 4]
Length = 302
Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 66/276 (23%), Positives = 112/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R + + +YVAD PYG +D
Sbjct: 13 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLLDEALVYVADSRHAPYGPRDDV 72
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + ++ + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 73 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 130
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 131 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 186
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 187 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 246
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 247 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 282
>gi|320354870|ref|YP_004196209.1| glutamate racemase [Desulfobulbus propionicus DSM 2032]
gi|320123372|gb|ADW18918.1| glutamate racemase [Desulfobulbus propionicus DSM 2032]
Length = 262
Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 8/256 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ V + + P + +Y+ D PYG+ + + +L +
Sbjct: 2 IGIFDSGVGGMTVARAIEQFCPGFPLVYLGDLARTPYGSKSPAMITEYSHRNTDFLL-RQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACN+A + LRS + + PA+ +AA + +G I ++ T AT+
Sbjct: 61 GAKLIVIACNSAASTASSFLRSHYHQLIIDVIFPAVDRAAGESVNGRIGVIGTRATINSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + C ++ + +L VEE ++ E K ++ K+ D +
Sbjct: 121 LYEQRLQAARPDCKVYSQACPLLVPLVEEGW----LERRETKMIVKKYLHPLRDKQIDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-INTHQTRVFDDH--ALFL 252
+L CTHYPL+ V +D+S +A + LL + Q+ D F+
Sbjct: 177 ILGCTHYPLLKKTIAPRIGRRVHIIDSSVEVALHLKTLLDSDHDLRQSLYAPDTPSRFFV 236
Query: 253 SGKPDIAMRRLMQGFG 268
S P + FG
Sbjct: 237 SDIPSPVHALASKIFG 252
>gi|325911946|ref|ZP_08174349.1| glutamate racemase [Lactobacillus iners UPII 143-D]
gi|325476248|gb|EGC79411.1| glutamate racemase [Lactobacillus iners UPII 143-D]
Length = 261
Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 17/265 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ +
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L K + + CNTA ++ P M +G + A+ TQ+
Sbjct: 53 LTRASVKFLLTK-NVKVIIFGCNTATAAAMSVIQQEIP-MQIIGVIQSGALAASKITQTN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++++T AT+ I +Q + + LA VE K +
Sbjct: 111 QVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLVEANPSDKIK-----KAVVV 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
C + + D ++L CTHYPL++ + +D +D +A+ +L R N
Sbjct: 166 QCLAPLKHVQYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLA 225
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQG 266
+ H + +G P M+ +
Sbjct: 226 AK-GGKHEYYTTGDPIKFMKIAQKW 249
>gi|110637498|ref|YP_677705.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
gi|110280179|gb|ABG58365.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
Length = 266
Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 6/254 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL +L K+ +P F Y D PYG +++ + + +
Sbjct: 1 MHQPIGIFDSGVGGLTLLDKLVHALPAESFEYYGDSGNCPYGTKTIEEIRQHTIRIMDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ K+ + ++ACNT T I D+LRS +P M +G P K A A + + I IL+T T
Sbjct: 61 MQKH-CKMIIVACNTITTNIIDQLRSIYP-MPIVGMEPGTKPAYASSANKRIGILATAGT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + S+ + L +E+ I++ + +++E
Sbjct: 119 INGQLYNRTLESFNDKAFFISQIGAGLVELIEQNI----IEQARMMQQLEPLLKPMIDAH 174
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHY + +V + P+P++ +D D++ R+ + +L T +
Sbjct: 175 IDTLVLGCTHYNYLTNVLAGMFPYPIEIIDTRDAVTRQVQRILQEKALKATGTERSVTIT 234
Query: 252 LSGKPDIAMRRLMQ 265
+G ++ + L +
Sbjct: 235 TTGDMEMLKQILKR 248
>gi|253681134|ref|ZP_04861937.1| glutamate racemase [Clostridium botulinum D str. 1873]
gi|253562983|gb|EES92429.1| glutamate racemase [Clostridium botulinum D str. 1873]
Length = 257
Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 5/253 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GGL VL++ ++P FIY D PYG + +KK L F +L
Sbjct: 7 PIGFFDSGVGGLSVLKEAIKILPNEDFIYYGDSKNAPYGTKKVDEVKK-LTFDAVKVLLG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y V+ACNTA + ++LR+T+ M +G PA+K A + G I I++T TL
Sbjct: 66 YNVKAIVVACNTATSAAIEDLRNTYKDMPIIGIEPALKPAVELSGDGKIVIMATNMTLAE 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L+ Y +C I + L +E+ ++ ++K+ + + +
Sbjct: 126 KKFNKLMSKYKDKCDIVSLPCPGLVEYIEKGI----VEGKKLKEFLVEKLSILDKDKIAS 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYP I + V +D S A + + L + N+ L+
Sbjct: 182 VVLGCTHYPFIKKELYSILGDEVVIIDGSFGTANQLKRKLIKSNSINKENKKGKITILNS 241
Query: 255 KPDIAMRRLMQGF 267
D + ++ +
Sbjct: 242 LKDDEIIKISKKL 254
>gi|157736547|ref|YP_001489230.1| glutamate racemase [Arcobacter butzleri RM4018]
gi|189082951|sp|A8ERI7|MURI_ARCB4 RecName: Full=Glutamate racemase
gi|157698401|gb|ABV66561.1| glutamate racemase [Arcobacter butzleri RM4018]
Length = 261
Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 6/228 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL+ + ++ Y+AD PYG + + KR + + +L +Y
Sbjct: 3 VGVFDSGLGGLTVLKSILKVLKNAEIFYIADTAYAPYGEKDSALILKRCEDITNYLLKEY 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ ++ACNTA + LR F S+ +G P IK A T+S I IL+TP+TL+
Sbjct: 63 KIDALIVACNTATSAAIKHLRDNFSSLIVIGTEPGIKPAILNTKSSNIGILATPSTLKSD 122
Query: 136 YTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L++ S + + LA ++E+ +I K +E I + D
Sbjct: 123 KYQLLVNELSSIKKVNLFEQACPGLAMQIEKG----EINTLTTYKMLEEWLIPMKEANVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
IVL CTHYPLI +++ + + D+IA+R L
Sbjct: 179 TIVLGCTHYPLISQTIKKIMGEDITLIQTGDAIAKRLLSLSEEKGHKN 226
>gi|257454377|ref|ZP_05619640.1| glutamate racemase [Enhydrobacter aerosaccus SK60]
gi|257448280|gb|EEV23260.1| glutamate racemase [Enhydrobacter aerosaccus SK60]
Length = 289
Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 19/270 (7%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSG+GGL VL ++ +P +IY+AD + PYG+ + +++ + +
Sbjct: 5 ASAPIGVFDSGLGGLSVLTHLQRRLPFERYIYLADTLHVPYGSRSEAQIRELTLQAVA-W 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L L VIACN+A R +P + +G VPA+K A + + +++L+TPAT
Sbjct: 64 LHSQGCKLIVIACNSASAHGLQAARRQYPQVPIVGLVPALKPAVMQSATKQVAVLATPAT 123
Query: 132 LRRTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
L + +I Q +H S L VE G+ + ++ E +
Sbjct: 124 LHGYLLNEVIEQVAKPQQVTVHKYSFNSLVPWVE---LGMPSHHPAVTD-LDHLLSELQD 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPW--------PVDWLDNSDSIARRARCLLPRINTHQ 241
K+ D +VL CTH+P Q V +D+ D+IA+R LL + N
Sbjct: 180 KKVDQLVLGCTHFPFFKAYLAQRIDELMTHQAMGQVALIDSGDAIAKRVHDLLEQANQLA 239
Query: 242 T-RVFDDHALFLSGK---PDIAMRRLMQGF 267
+ + + + + A RL+Q F
Sbjct: 240 SHKERPRLQFYATANLPTTEQAATRLLQRF 269
>gi|256820188|ref|YP_003141467.1| glutamate racemase [Capnocytophaga ochracea DSM 7271]
gi|256581771|gb|ACU92906.1| glutamate racemase [Capnocytophaga ochracea DSM 7271]
Length = 269
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 9/252 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG + +++ LMP + +++AD+ PYG + +L+
Sbjct: 9 APIGLFDSGVGGTTIWKEVNALMPNENTLFIADNKNAPYGEKTKEEIIALCDANTRFLLE 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL
Sbjct: 69 -NNAKIIVVACNTGTTNAISYLRNKYKEVPFIGIEPAIKPASLQSVTKKIGVLATRSTLA 127
Query: 134 RTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Q I L +E +IK E+ + + +
Sbjct: 128 SDLFAKTSEHLKQEEQVEIIEQVGEGLVDLIEAG----RIKSPEMTLLLRKYLLPMIAEG 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHA 249
D +VL CTHYP ++ ++L P + +D+ ++A++ R +L + + H
Sbjct: 184 IDYLVLGCTHYPYLLPQIQELIPPHIKVIDSGYAVAKQTRNILSQHHLLNDDATAEPQHL 243
Query: 250 LFLSGKPDIAMR 261
+GK ++ +
Sbjct: 244 WLANGKVEVLQQ 255
>gi|328949910|ref|YP_004367245.1| Glutamate racemase [Marinithermus hydrothermalis DSM 14884]
gi|328450234|gb|AEB11135.1| Glutamate racemase [Marinithermus hydrothermalis DSM 14884]
Length = 264
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 12/254 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ +R +P F+Y D PYG+ +++ + +L K
Sbjct: 9 PIGVFDSGVGGLTVLRALRAALPGEDFLYFGDTARVPYGSKPPALVRQFAWEISGFLLRK 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA ++ +L ++ + PA+ AAA G + ++ T T++
Sbjct: 69 G-VKAIVVACNTASSVALPDLAASLSVPVYGVLEPAV--AAALRVEGRVGLIGTETTVQS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + VEE + ED + + + +++ K
Sbjct: 126 GAYQARLARAGRA--VWARPCPLFVPLVEEG-----LWEDGVARLVVAHYLKDAPKDLSA 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYP + V ++ P V +D+++ AR L F++G
Sbjct: 179 LILGCTHYPYLKPVIAEVLP-GVQLIDSAEVTARVVAEGLEARGLRNPEGAGRVVHFVTG 237
Query: 255 KPDIAMRRLMQGFG 268
P R L G
Sbjct: 238 DPGT-YRVLANRLG 250
>gi|152993509|ref|YP_001359230.1| glutamate racemase [Sulfurovum sp. NBC37-1]
gi|189030376|sp|A6QBL4|MURI_SULNB RecName: Full=Glutamate racemase
gi|151425370|dbj|BAF72873.1| glutamate racemase [Sulfurovum sp. NBC37-1]
Length = 265
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 6/233 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL V+Q + ++ YVAD PYG + + + + + LD++
Sbjct: 3 VGVFDSGLGGLTVVQALSRVIKGADIFYVADTKHAPYGEKTPEQILQYSLNITAYFLDEH 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q + +IACNTA + LR +P + +G P IK A T++ I +L+TPATL
Sbjct: 63 QIDVLIIACNTATSAAVKTLRERYPELIIIGTEPGIKPALEQTRTKNIGVLATPATLVGE 122
Query: 136 YTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+L++ ++ + + + L ++E +I+ + +EG D
Sbjct: 123 KYQDLVNVLSAKEEVTLYEQACPGLVEQIENG----EIESGKTHDMLEGWLHPMRENDVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
IVL CTHYPL+ H ++ ++ + D+IA+R L F
Sbjct: 179 TIVLGCTHYPLVAHKIEEIMKREMNLIHTGDAIAKRLLALAEEKGYENRGKFS 231
>gi|86140719|ref|ZP_01059278.1| glutamate racemase [Leeuwenhoekiella blandensis MED217]
gi|85832661|gb|EAQ51110.1| glutamate racemase [Leeuwenhoekiella blandensis MED217]
Length = 263
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 7/247 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GG + +++ +P IY+AD PYG + + ++
Sbjct: 4 KRPIGVFDSGVGGTSIWKEIVAKLPYEDSIYLADIKNAPYGERSKEEIIALSVKNTEYLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D+ + V+ACNTA T D LR+ + + F+G PAIK AA +++ I IL+T TL
Sbjct: 64 DQG-CKIIVVACNTATTNAIDVLRANY-DIPFIGIEPAIKPAALASKTKAIGILATKGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ Y S+ ++ V L +E K+ +++ ++ +
Sbjct: 122 SSALFARTSSLYTSELNVVEVIGKGLVELIEAG----KLHTEKLFNLLKSYIEPMLAQNI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
D +VL C+HYP ++ V +++ P + +D+ ++A++ +L Q F H L+
Sbjct: 178 DYLVLGCSHYPYLIPVLKKILPEHIQIIDSGQAVAKQTERVLGANQLLSQVDQFGKHKLY 237
Query: 252 LSGKPDI 258
+ +I
Sbjct: 238 SNASIEI 244
>gi|260910465|ref|ZP_05917134.1| glutamate racemase [Prevotella sp. oral taxon 472 str. F0295]
gi|260635411|gb|EEX53432.1| glutamate racemase [Prevotella sp. oral taxon 472 str. F0295]
Length = 279
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 14/267 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++ +P + I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + +
Sbjct: 1 MNKFPQQA---GPIGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYGPRSFDVVYQ 57
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRST-FPSM----AFLGAV-PAIKQAAA 116
+ ++ L +I CNTA ++ PS+ LG + P + +
Sbjct: 58 FTRQAVIKLFEQG-CHLIIIGCNTASAKALRSIQQRDLPSLDAKRRVLGIIRPTAETIGS 116
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T + + IL+T T++ I + ++ + A+ VE + +
Sbjct: 117 LTATRHVGILATEGTIKSDSYRLEIQKLFPDIQVQGMACPLWAAIVEANEADSPGADYFV 176
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
KK I+ + + + D IVL CTHYPL+++ + P V + + +A + L R
Sbjct: 177 KKRIDA--LMRTDPQIDAIVLGCTHYPLLMNSIVKHVPSGVRIVPQGEYVANSLQQYLQR 234
Query: 237 INTHQT--RVFDDHALFLSGKPDIAMR 261
+ D
Sbjct: 235 HPEIDALCTKQGTVRYLTTENKDKFKE 261
>gi|239787442|emb|CAX83914.1| Glutamate racemase [uncultured bacterium]
Length = 277
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 13/262 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+K I IFDSG+GGL VL+ + P FIY+ D PYG +++ + +
Sbjct: 2 AKKYDSRPIGIFDSGVGGLTVLKALVSRFPHERFIYLGDTARVPYGTKSARTVERYSIQV 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK----QAAAYTQSGLI 123
+L + L V+ACNTA L + L+S P+ P + AA + G +
Sbjct: 62 ADCLLARGVKGL-VVACNTASALGMEALKSHSPTPILGVIEPGCRAAGALAAGLGRPGKV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++ T +T+ + + ++ + VEE +++ ++ +E
Sbjct: 121 GVIGTRSTVASGAYPAQLSRLDPGIEVFSLACPLFVPLVEEGW----LEQPAVRLIVEES 176
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+R D ++L CTHYPL+ V ++ V +D++ ++A L R+
Sbjct: 177 LSPFLDQRLDALILGCTHYPLLAPVIAEVMGSAVPLVDSATAVADELERYLVRVIAPAPA 236
Query: 244 VFDDH----ALFLSGKPDIAMR 261
V + ++ D
Sbjct: 237 VPEATGARLHFLVTDVADRFKE 258
>gi|328462612|gb|EGF34566.1| glutamate racemase [Lactobacillus helveticus MTCC 5463]
Length = 266
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 102/267 (38%), Gaps = 16/267 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GG V++ + +P +++ D PYG+ + +
Sbjct: 1 MDNRP--------IGLLDSGVGGFTVVK-VIEKLPHESTVFIGDSANMPYGDKSREQIIE 51
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L K L + ACNTA + L++ AA T++
Sbjct: 52 LTRRSVKFLLQKK-VKLIIFACNTATAVAMPTLQNEVEQQIIGVIQSGSLAAARTTKNKK 110
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+++ +TP T+ I + V++ LA +E D ++
Sbjct: 111 VAVAATPVTINSHAYQKEIKFRDPDIKVMEVAAPELAPLIESQK-----DYDTNLAAVKR 165
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ + D VL CTHYPLI + F + + +D +D +A+ ++ R +
Sbjct: 166 SIAPLKDQDFDTFVLGCTHYPLIQNEFVEALGDKIQIVDPADQVAQYTFNVMRRDGLFSS 225
Query: 243 -RVFDDHALFLSGKPDIAMRRLMQGFG 268
H + +G PD + G
Sbjct: 226 FDQAGKHEYYTTGDPDKFSEMGRRFLG 252
>gi|296105345|ref|YP_003615491.1| glutamate racemase [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295059804|gb|ADF64542.1| glutamate racemase [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 260
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 79/256 (30%), Positives = 137/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEDFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR+ F +G VPAIK AA T +G++ +L+T T++R Y
Sbjct: 62 LALAVIACNTASTVSLPALRAKF-QFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 TRELIDRFANECQIAMLGSAELVEMAEAKLHGKTVPLEELRRILRPWLRMPEP--PDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ ++ P +D+ +IARR LL + A ++
Sbjct: 179 LGCTHFPLLQEELLEVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMALTN 238
Query: 257 DI-AMRRLMQGFGLKS 271
+ + +++ +G ++
Sbjct: 239 ETEQLLPVLRRYGFET 254
>gi|145220321|ref|YP_001131030.1| glutamate racemase [Prosthecochloris vibrioformis DSM 265]
gi|145206485|gb|ABP37528.1| glutamate racemase [Chlorobium phaeovibrioides DSM 265]
Length = 271
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 6/211 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q+ I IFDSG+GGL VL+ M+ L+P +Y D PYG +++ + IL
Sbjct: 8 QSPIGIFDSGVGGLTVLKAMQKLLPSEQLLYFGDTARVPYGTKSQVTIRRYA-EEDTRIL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPAT 131
++QP + ++ACNT L D + T + LG + A A T++G I ++ T AT
Sbjct: 67 LRHQPKMIIVACNTVSALALDVVEKTADPLPVLGVLEAGADTAVEVTRTGRIGVIGTQAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I+ + + + + EE + ++ + E
Sbjct: 127 ISSNAYAYAINQASADSEVFSTACPLFVPLAEEGMLNNEATRLIAREYLAPLLAE----E 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
D +VL CTHYP++ + + + V +D+
Sbjct: 183 IDTLVLGCTHYPILRTIIEETAGTGVTIIDS 213
>gi|325280786|ref|YP_004253328.1| Glutamate racemase [Odoribacter splanchnicus DSM 20712]
gi|324312595|gb|ADY33148.1| Glutamate racemase [Odoribacter splanchnicus DSM 20712]
Length = 278
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++ + SI +FDSG GGL +L+++ +PEY+++Y+ D+ PYG + +
Sbjct: 1 MEQHKESIGVFDSGYGGLTILKEIVRKLPEYNYVYLGDNARAPYGARSFEVVYEYTREAV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122
+ + + L ++ACNTA +L P LG + P+++ Y+Q+G
Sbjct: 61 HKLFE-MECRLVILACNTASAKALRTIQQVDLPQWDPEKRVLGVIRPSVEALNTYSQNGH 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ IL+T T+ + + I ++ + VE + ++K I
Sbjct: 120 VGILATRGTVASGSYPIEVGKLYGEERFRITQLACPMWVPLVENNELDGEGAIYFVRKYI 179
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D I+L CTHYPL+ + + P V + +A L R
Sbjct: 180 QELLG--TDPEIDTIILGCTHYPLLRPLIARFVPSRVKIIGQGQIVAGSLADYLKRHPEI 237
Query: 241 QTRVFDDHA--LFLSGKPDIAMR 261
R+ D + K ++ R
Sbjct: 238 DRRLGKDSRRSYLTTEKTELFDR 260
>gi|260771658|ref|ZP_05880578.1| glutamate racemase [Vibrio metschnikovii CIP 69.14]
gi|260613435|gb|EEX38634.1| glutamate racemase [Vibrio metschnikovii CIP 69.14]
Length = 269
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 83/249 (33%), Positives = 134/249 (53%), Gaps = 9/249 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+++L + +LIFDSG+GGL V Q++ L+P+ + Y+ D+ +PYG L R+ L
Sbjct: 1 MQQQLSHKVLIFDSGVGGLSVYQEIVSLLPQLDYTYLFDNAAYPYGELAQEVLLNRVERL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++ + L VIACNTA T++ LR+ S+ +G VPAIK A+ I +++
Sbjct: 61 IISLVKQQSFDLVVIACNTASTIVLPMLRAKL-SIPVVGVVPAIKPASLVAH-KAIGLIA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT+ R YT +LI ++ S+ + L+ S L EE G ++ ++E+ +
Sbjct: 119 TPATITRQYTHDLIRNFSSKKSVELLGSTRLVDMAEEKLRGQEVDKEELATILSPLI--- 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+R DV VL CTH+PLI +Q+ V +D+ +IARR + LL + +
Sbjct: 176 --QRIDVAVLGCTHFPLIKAEIQQVLGDDVMLIDSGQAIARRVQQLLDVEPGLKHQ--HP 231
Query: 248 HALFLSGKP 256
H +F S P
Sbjct: 232 HTIFASAPP 240
>gi|296129171|ref|YP_003636421.1| glutamate racemase [Cellulomonas flavigena DSM 20109]
gi|296020986|gb|ADG74222.1| glutamate racemase [Cellulomonas flavigena DSM 20109]
Length = 285
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 13/262 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +Y+ D + PYG A++ + + D++
Sbjct: 18 DAPIGIFDSGVGGLTVARAVLDQLPHESTLYIGDTLNGPYGPKPLAAVRAHALEIMDDLV 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAV-PAIKQAAAYTQSGLISILST 128
D + VIACN+A + + R + + + V PA ++A A T++G I ++ T
Sbjct: 78 DAG-VKMLVIACNSASAAVLRDARERYTVRRGLPVVEVVLPAARRAVAATRNGRIGVIGT 136
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + V+ + + VE +
Sbjct: 137 RATVESRAYDDAFA--VAGVDLTSRACPRFVELVEAGVTSGP----DALATAHEYLDPVR 190
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FD 246
D +VL CTHYPL+ V + V + +++ A+ L + +
Sbjct: 191 QAGVDTLVLGCTHYPLLTGVISYVMGDQVTLVSSAEETAKDVYRTLVAHDLERDPAAGPP 250
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
H +G P + G
Sbjct: 251 THRFLATGDPGSFAALARRFLG 272
>gi|94986184|ref|YP_605548.1| glutamate racemase [Deinococcus geothermalis DSM 11300]
gi|94556465|gb|ABF46379.1| Glutamate racemase [Deinococcus geothermalis DSM 11300]
Length = 271
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 10/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + +FDSG+GGL VL ++R +P F+Y+AD P G D ++ + +
Sbjct: 4 EAPLGVFDSGVGGLSVLAQLRRHLPHEDFLYLADTAHVPIGARPDDEIRDLTERAVAALH 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ V+ACNTA LR + PS +G VPA+K A A T+SG++ +L+TP T
Sbjct: 64 ARGAKG-VVVACNTASAFSLTPLRERYGPSFPIIGLVPAVKPAVAATRSGVVGVLATPGT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
LR T ++I + + +++ S L VE + + +
Sbjct: 123 LRGTLLRDVIRKWADPAGVRVLTAVSAELVPLVEAGQA----SSERARAVLRETLTPLAQ 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTHYP + R+ +D+ ++AR +L + HA
Sbjct: 179 AGADQLVLGCTHYPFLAESIRREFGDTFALVDSGAAVARHTGNVLAGAGLLREAGRPGHA 238
Query: 250 LF-LSGKPDIAMRRLMQGF 267
+ ++G P+ A R +M
Sbjct: 239 TYLVTGNPE-ASRPVMATL 256
>gi|229101609|ref|ZP_04232332.1| Glutamate racemase [Bacillus cereus Rock3-28]
gi|228681851|gb|EEL36005.1| Glutamate racemase [Bacillus cereus Rock3-28]
Length = 264
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 52/254 (20%), Positives = 103/254 (40%), Gaps = 7/254 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + F + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFV-FEMVECLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA L+ S+ +G + P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNTAAAAALTALQEAL-SIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQSNM 118
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+H + +H + LA+ VE + ++++ + + D ++
Sbjct: 119 YEKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTLI 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 175 LGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSV 234
Query: 257 DIAMRRLMQGFGLK 270
+ G +
Sbjct: 235 LSFEHIAERWLGYE 248
>gi|158520555|ref|YP_001528425.1| glutamate racemase [Desulfococcus oleovorans Hxd3]
gi|158509381|gb|ABW66348.1| glutamate racemase [Desulfococcus oleovorans Hxd3]
Length = 261
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 104/241 (43%), Gaps = 7/241 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + + Y +Y D PYG + K + +++L +
Sbjct: 2 IGIFDSGLGGLTVARAVMDELAGYDILYFGDTARTPYGAKSPETVIKYALEN-TELLLSH 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ ++ACNTA ++ + + + F F PA+ AA +++G I ++ T AT+
Sbjct: 61 GAKMVIMACNTASSVATEAVTARFDIPVFEVITPAVALAARLSKTGAIGVIGTRATINSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I +H + +L VEE +K+ E ++ + ++ D +
Sbjct: 121 IYEKKILEQRPGARVHSQACPLLVPLVEEGW----LKKPETAMIVKKYLHPLKTRQVDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDHALFLS 253
+L CTHYP++ V +D+S ++AR + + + + +S
Sbjct: 177 ILGCTHYPILKKTIGHKIGRRVAIIDSSTAVARSVKAFIDGHPPMEASLSKTGTARFLVS 236
Query: 254 G 254
Sbjct: 237 D 237
>gi|163846057|ref|YP_001634101.1| glutamate racemase [Chloroflexus aurantiacus J-10-fl]
gi|222523790|ref|YP_002568260.1| glutamate racemase [Chloroflexus sp. Y-400-fl]
gi|163667346|gb|ABY33712.1| glutamate racemase [Chloroflexus aurantiacus J-10-fl]
gi|222447669|gb|ACM51935.1| glutamate racemase [Chloroflexus sp. Y-400-fl]
Length = 262
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 10/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V++ + +P+ +Y+AD PYG ++ R + ++D+
Sbjct: 2 IGIFDSGLGGLSVMRAIHERLPDTDLLYLADSAYCPYGPRPLSEIRDRALACGRWLVDQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA + LR P + +G P +K A A T++G +++L+T TL
Sbjct: 62 A-RIVVVACNTATAAAIELLRRELP-VPVVGMEPGVKPAVAATRNGKVAVLATSGTLASD 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L+ +Y + ++ ++ L ++VE +++ D+ + IE DVI
Sbjct: 120 RFRSLVQAYAAGVEVYPLACPDLVAQVEAG----ELQSDQTRNLIEQHLA--TVPEVDVI 173
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+P + + + V +D ++A + + +IN +G
Sbjct: 174 VLGCTHFPPLKPLIATCAGSHVTVIDTGPAVAAQTERIARQINVPAG--SGTIRCATTGD 231
Query: 256 PDIAMRRLMQGFG 268
P + L +G
Sbjct: 232 PQLVAPALYNVWG 244
>gi|262201908|ref|YP_003273116.1| glutamate racemase [Gordonia bronchialis DSM 43247]
gi|262085255|gb|ACY21223.1| glutamate racemase [Gordonia bronchialis DSM 43247]
Length = 254
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 9/249 (3%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL V + + L+P+ +Y+ D PYG +++ + + D+ + VI
Sbjct: 1 MGGLTVARAIIDLLPDEDIVYIGDTANGPYGPLTIPEIRRHALAIGDDLAARG-VKAIVI 59
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + R + + + V PA+++A T++G I ++ T AT+ +
Sbjct: 60 ACNTASAACLRDARERYAPIPVVEVVLPAVRRAVVATKTGRIGVIGTEATIASRAYQDSF 119
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ I V+ VE + +I +G + D +VL CTH
Sbjct: 120 AA-ARDAVITAVACPRFVDFVERGITSGR----QILGLAQGYLEPLQEAGVDTVVLGCTH 174
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFLSGKPDIA 259
YPL+ V + V + +++ A+ +L + + D +G P+
Sbjct: 175 YPLLSGVIQLAMGDEVTLVSSAEETAKDLFRVLTEADLLHSHSDRVADRVFQATGDPEFF 234
Query: 260 MRRLMQGFG 268
R + G
Sbjct: 235 ARLSSRFLG 243
>gi|309812185|ref|ZP_07705943.1| glutamate racemase [Dermacoccus sp. Ellin185]
gi|308433872|gb|EFP57746.1| glutamate racemase [Dermacoccus sp. Ellin185]
Length = 266
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V + + +P IY+ D PYG +++ + ++
Sbjct: 3 DAPIGIFDSGYGGLTVARAVLDQLPHEKIIYLGDTARAPYGPRPIAEVRQYAIECLDSLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L VIACN+A + + R + PA ++AAA T++ + ++ST AT
Sbjct: 63 EQGVKAL-VIACNSASAAVLHDARERYDVPVVEVIRPATRRAAAATRNNRVGVISTEATH 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ ++ + Q I V VE E+ +
Sbjct: 122 QSGAYTDSFAA-APQVKISSVPCPRFVEFVEAGITSGP----ELLTVAHKYLDGLVDEGV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D ++L CTHYPL+ V + V + +++ A+ +L I + H
Sbjct: 177 DTLILGCTHYPLLTGVISYVVGSTVTLVSSAEETAKDVYRVLADIGQLRDPELGPTQHQW 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G P + G
Sbjct: 237 MTTGDPAAFETLARRFLG 254
>gi|238897697|ref|YP_002923376.1| glutamate racemase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465454|gb|ACQ67228.1| glutamate racemase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 271
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 87/257 (33%), Positives = 141/257 (54%), Gaps = 5/257 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
S+LI DSGIGGL V Q+M+ L+P H+IY D+ GFPYG + + ++++ + + I K
Sbjct: 12 SVLILDSGIGGLSVYQEMKKLLPHIHYIYCFDNEGFPYGEKSEIFILEQIVRIMTAIQKK 71
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ +IACNTA T++ LR F S +GAVPAIK AA T++G++ +L+TPAT++R
Sbjct: 72 HFLNCVIIACNTASTIVLPILRQRF-SFPIIGAVPAIKPAAHITRNGVLGLLATPATIKR 130
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT +LI + C + L+ S L E+ G +I + KK ++ K D
Sbjct: 131 PYTLDLIKRFAKNCQVELLGSSELVYLAEKKVLGTEISINMFKKILQPWL--NLQKVPDT 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
IVL CTH+P I++ +Q+ + + +IA+RA L+ F + A +
Sbjct: 189 IVLGCTHFPFIINELQQIF-LNARMIHSGAAIAKRAFSLIGSQQNTSVHSFKNKAYCVKK 247
Query: 255 KPDI-AMRRLMQGFGLK 270
D ++ +++ +G
Sbjct: 248 NGDTESLSPILEKYGFS 264
>gi|332883073|gb|EGK03357.1| glutamate racemase [Dysgonomonas mossii DSM 22836]
Length = 275
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 11/255 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L +++ LMPEY + Y+ D+ PYG + + + + D
Sbjct: 5 GPIGVFDSGYGGLTILSEIQALMPEYDYCYLGDNSRAPYGARSFEVVYEFTKQAVTALFD 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA ++ P LG + P + T+S + +L
Sbjct: 65 -MGCNLVILACNTASAKALRTIQQKDLPNMNPDKRVLGIIRPTAEIIGQITRSRHVGVLG 123
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ I+ + + + VE + + +KK ++
Sbjct: 124 TVGTIQSQSYPIEINKLFPDIKVTGEACPMWVPLVENNEYESEGADYFVKKNLDNILA-- 181
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVF 245
+ D+++L CTHYPL++H +++ P V L + IA + L R
Sbjct: 182 KDPDIDILILGCTHYPLLLHKIKKILPKEVTALPQGEYIAHSLKDYLRRHPEMDGACTKN 241
Query: 246 DDHALFLSGKPDIAM 260
+ F + +
Sbjct: 242 GETHYFTTESSEKFS 256
>gi|154247770|ref|YP_001418728.1| glutamate racemase [Xanthobacter autotrophicus Py2]
gi|154161855|gb|ABS69071.1| glutamate racemase [Xanthobacter autotrophicus Py2]
Length = 305
Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 100/252 (39%), Positives = 146/252 (57%), Gaps = 1/252 (0%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL V +++ + P+ HFIY ADD FPYG D L R+ + + ++
Sbjct: 32 PTILVFDSGLGGLSVFREVARVRPDAHFIYAADDAAFPYGALADDTLVDRINRVVNRLIG 91
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ +P L VIACNTA TL LR+ P++ F+G VPAIK A +++ +S+L+TP T+R
Sbjct: 92 EVRPDLVVIACNTASTLALPSLRAAHPTLPFIGTVPAIKPACIASRTKRVSVLATPGTVR 151
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT+ L+ + S C + LV S LA E G + + +I EI CF+ G+RTD
Sbjct: 152 RDYTAALVREFASGCDVALVPSDRLAGLAEAAMAGDPVDDCDIVAEIAPCFVNSGGRRTD 211
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALFL 252
+VLACTHYPLI+ +L+PWPV ++D + +IARR L+ L
Sbjct: 212 TVVLACTHYPLILDRLTRLAPWPVTFIDPAPAIARRVTQLIGTAAPGTANEDPPPVRLVS 271
Query: 253 SGKPDIAMRRLM 264
+ +P A R
Sbjct: 272 TLRPMEATRISA 283
>gi|86606820|ref|YP_475583.1| glutamate racemase [Synechococcus sp. JA-3-3Ab]
gi|86555362|gb|ABD00320.1| glutamate racemase [Synechococcus sp. JA-3-3Ab]
Length = 292
Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 109/274 (39%), Gaps = 18/274 (6%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ I +FDSG+GGL V + +R +P+ +Y AD PYG+ + + +
Sbjct: 7 SDPDPSWPIGVFDSGLGGLTVWRALRRRLPQERLVYFADTARLPYGDRSAEEILTFVRQI 66
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + V+ACNT+ L ++++ F ++ LG + QAA Q I +++
Sbjct: 67 LRWM-QAQPVKVVVMACNTSSALALEQVQQEF-ALPILGLILPGAQAALA-QGSRIGVIA 123
Query: 128 TPATLRRTYTSNLIHSYVS--------QCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
T AT++ S I Y + + +E ++ E+++
Sbjct: 124 TAATVKSRAYSKAIQEYSALDPRRFPQPVQCWEQACPEFVPLIEAG----QLDGPELRQA 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
E + D +V CTHYPL+ + + L P V +D ++ L
Sbjct: 180 AERYLQPLLQQGIDTLVYGCTHYPLLDPLLKSLLPSSVRRVDPGVALVGSLARELSLWGL 239
Query: 240 HQTRV---FDDHALFLSGKPDIAMRRLMQGFGLK 270
+ + H ++SG P+ + G +
Sbjct: 240 RRPSTASQAEPHRFYVSGDPERFAQLATPWLGFR 273
>gi|332530565|ref|ZP_08406502.1| glutamate racemase [Hylemonella gracilis ATCC 19624]
gi|332039971|gb|EGI76360.1| glutamate racemase [Hylemonella gracilis ATCC 19624]
Length = 276
Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I +FDSGIGGL VLQ + +P ++YVAD PYG E + R M + ++
Sbjct: 14 ESPIGVFDSGIGGLSVLQALHAELPHQRYVYVADSGHAPYGEREPQHVIDRTMAVAEYLV 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ V+ACNTA + LR+ P + +G PAIK AA ++++ + +L+T TL
Sbjct: 74 ARHGIQALVVACNTATAIAIHLLRAEHPHLPLVGLEPAIKPAAQHSRNHRVGVLATRGTL 133
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY-ACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ L S Q L LA +E I + + C
Sbjct: 134 QSEKFRVLHASLAQQAEFVLQPCDGLAGAIERQDEERIATLSAQYASALGPCGTAP--GC 191
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPLI R L V +++ +AR+ R +LP I T +
Sbjct: 192 IDTVVLGCTHYPLITSQLRALLGPDVVMIESGAPVARQTRRVLPHIGDAGT---PSTVYY 248
Query: 252 LSGKPDIAMRRLMQG 266
+G+ +
Sbjct: 249 TTGQIGALQAAARRW 263
>gi|213961790|ref|ZP_03390056.1| glutamate racemase [Capnocytophaga sputigena Capno]
gi|213955579|gb|EEB66895.1| glutamate racemase [Capnocytophaga sputigena Capno]
Length = 271
Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 9/252 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG + +++ LMP +++AD+ PYG + +L
Sbjct: 9 APIGLFDSGVGGTTIWKEINALMPNESTLFLADNKNAPYGEKTKEEIITLCDANTQFLLA 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL
Sbjct: 69 QKA-KIIVVACNTGTTNAISYLRNKYKDVPFIGIEPAIKPASLQSVTKKIGVLATRSTLA 127
Query: 134 RTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Q I L +E +I+ E+ + + +
Sbjct: 128 SDLFAKTSEHLKQEEQVEIIEQVGEGLVDLIEAG----RIESPEMTQLLRHHLLPMVALG 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHA 249
D +VL CTHYP ++ +QL P + +D+ ++A++ R +L + + T + H
Sbjct: 184 IDYLVLGCTHYPYLLPQIQQLIPARIKVIDSGYAVAKQTRNILLQHHLLNEDTSMTPSHI 243
Query: 250 LFLSGKPDIAMR 261
+G ++ +
Sbjct: 244 WLANGNTEVLKQ 255
>gi|255994482|ref|ZP_05427617.1| glutamate racemase [Eubacterium saphenum ATCC 49989]
gi|255993195|gb|EEU03284.1| glutamate racemase [Eubacterium saphenum ATCC 49989]
Length = 267
Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 16/265 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I FDSG+GGL + + +P IY D PYG+ +++
Sbjct: 1 MDNRP--------IGFFDSGLGGLTCIASVSRRLPHEDIIYFGDTARTPYGSKSVKTIQR 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQS 120
+ +L K + VIACN+ LR + + +G + + K +
Sbjct: 53 FSAEICDFLLQK-NVKMIVIACNSVSATSLGFLREKYKDIPIVGIIESAAEKAIDDAKEG 111
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I I+ T AT+ N+I V + + +EE I +K +
Sbjct: 112 NKIGIIGTKATISSMAYKNIIEQSVEGADVAQKACPAFVPLIEEGIIENDIMNLSVKYYL 171
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ E R + +VL CTHYP I + ++ P + +D SD ++R+ +L + +
Sbjct: 172 DHFIAE---NRINTLVLGCTHYPFIANNIKRNYP-NLKLIDPSDEVSRQIEKILKKKDIV 227
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQ 265
+ + + S D +R + +
Sbjct: 228 ACK-DGNKQFYASDVSDNFIRMVQE 251
>gi|148272474|ref|YP_001222035.1| glutamate racemase [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
gi|147830404|emb|CAN01339.1| murI [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 294
Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 92/239 (38%), Gaps = 6/239 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + L+P Y+ D PYG+ +++ + + D++
Sbjct: 3 DAPIGIFDSGVGGLTVARAVATLLPRESITYIGDTAHTPYGDKPIADVRRYALAVLDDLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA + + R + PA++ A + T++ + +++T AT+
Sbjct: 63 ERG-VKMLVIACNTASAAMLRDARERYDIPVVEVIQPAVRTAVSVTRNHRVGVIATHATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + VE E+ EG
Sbjct: 122 TSRAYDDAFAA-APHLELTSAEAPDFVAFVERGVTSGP----ELMAAAEGYLAPLRAAGI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYP + L V + + A+ L + +
Sbjct: 177 DTLVLGCTHYPFLEGAISLLMGPDVTLVSSDTETAKDVYRELVSAGLERRSDAPPVIRY 235
>gi|82702343|ref|YP_411909.1| glutamate racemase [Nitrosospira multiformis ATCC 25196]
gi|82410408|gb|ABB74517.1| glutamate racemase [Nitrosospira multiformis ATCC 25196]
Length = 268
Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 12/255 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSGIGGL VLQ ++ P+ ++Y+ D PYG + +R IL
Sbjct: 7 SPIAVFDSGIGGLTVLQALKKRYPQESYVYLGDTARLPYGTKSPE-IVQRYSQSLCRILL 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
Y P VIACNTA T + +R+ + +G + PA A T++ I +++T T+
Sbjct: 66 NYNPSAIVIACNTASTHALEAVRALAAPLPVIGMIEPAAAAAIQATKNQHIGVIATFGTI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + +L + EE I +++ ++ F +
Sbjct: 126 RSGVYEKELKKINPHIKASSQACQMLVALAEEGWSSGPIATAIVRQYLDPIF--DTAEAP 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTH+P+ +FR + V +++ ++ A + + T +
Sbjct: 184 DTLILGCTHFPVFEALFRDILGSSVTLINSGEAAATQLSGI--------TGTRGQIKMLA 235
Query: 253 SGKPDIAMRRLMQGF 267
+ P+ + F
Sbjct: 236 TDDPERFAANASKFF 250
>gi|149374689|ref|ZP_01892463.1| glutamate racemase [Marinobacter algicola DG893]
gi|149361392|gb|EDM49842.1| glutamate racemase [Marinobacter algicola DG893]
Length = 283
Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 5/224 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+FDSG+GGL V + +P +Y+AD+ GFPYG + + +R L L ++
Sbjct: 6 VLVFDSGVGGLSVADCIHRQLPGVKLVYLADNAGFPYGAQPESVVIERSQALIRLALSEF 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA T++ LR+ S+ +G VPA+K AAA +++ I +L+TPAT+RR
Sbjct: 66 PCDVIVVACNTASTVVLPYLRAM-TSIPVVGVVPAVKPAAAVSENRRIGLLATPATVRRP 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y ++LI + S C + + L +E G + E + ++ D +
Sbjct: 125 YLADLIDEFASDCTVERLGHPDLVQWIENLVSGSPVPEQALSVALQ----PFRDVGVDTV 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
VL CTHYPLI + ++ P W+D+ ++IARRA L +
Sbjct: 181 VLGCTHYPLIKDLLQRQLPAVKHWVDSGEAIARRAIWLFEQQGL 224
>gi|78184894|ref|YP_377329.1| glutamate racemase [Synechococcus sp. CC9902]
gi|78169188|gb|ABB26285.1| glutamate racemase [Synechococcus sp. CC9902]
Length = 262
Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 11/254 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
FDSGIGGL VL+++ IY+ D PYG+ ++ + + + D+ Q
Sbjct: 6 GFFDSGIGGLTVLRQVLERHGPVQCIYLGDTARVPYGSRSAPEIRLIAAEVVAWLRDQ-Q 64
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L +D +G + A AAA Q+ + +L+TPAT+
Sbjct: 65 VSTVVMACNTTNALARDVAEGQAGG-PVIGLIGA---AAAMVQTSRVGVLATPATVASEA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ I + + + +E + DE+++ + + IV
Sbjct: 121 YRSSIEALHPGTLVVEQACPEFVPLIESG----DLSSDELRRTAKEYLQPLLKASVESIV 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHALFLSG 254
L CTHYPL+ V RQL P V +D + +AR+ +L P+ + + DD ++
Sbjct: 177 LGCTHYPLLEPVLRQLLPDSVQLIDPAVGVARQLDSVLGAPKPSVGEGLHLDDCRFCVTA 236
Query: 255 KPDIAMRRLMQGFG 268
PD R G
Sbjct: 237 DPDGFATRATPWLG 250
>gi|46447487|ref|YP_008852.1| glutamate racemase [Candidatus Protochlamydia amoebophila UWE25]
gi|46401128|emb|CAF24577.1| probable glutamate racemase [Candidatus Protochlamydia amoebophila
UWE25]
Length = 249
Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 7/233 (3%)
Query: 30 QKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFT 89
++M L+P+ + +Y+ D PYGN + + + +L+K Q + V+ACNTA
Sbjct: 2 REMIRLLPQENLLYLGDTARVPYGNKSAATIIRYSIENAIFLLEK-QIKVLVVACNTASA 60
Query: 90 LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148
L +L+ F + +G + P K AAA T++ I++L T T+ + IH +
Sbjct: 61 LALPKLKQLF-HLPIIGVIEPGAKLAAATTRNKRIAVLGTKGTIESGAYQSAIHQLIPDA 119
Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
I ++ +L S VEE + K I+ E D I+L CTHYPL+ +
Sbjct: 120 IIFPIACPLLVSLVEEGF----LYHSASKLIIQEYLKNLEKADVDTILLGCTHYPLLKPL 175
Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMR 261
++ V +D++ + A+ + LL + H F++ P+ +
Sbjct: 176 IEEIMGSSVTIIDSALTCAQTVKKLLESHQLVNSNQHAIHQYFVTDDPEKFRQ 228
>gi|167855237|ref|ZP_02478006.1| glutamate racemase [Haemophilus parasuis 29755]
gi|167853601|gb|EDS24846.1| glutamate racemase [Haemophilus parasuis 29755]
Length = 256
Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL + +R +P+ H++Y D+ FPY + L +R + + I + Y + V+
Sbjct: 1 MGGLTIYDAIRENLPDAHYLYCFDNAYFPYSEKSEAVLIERAVGIVQKIAENYPLDMVVV 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA T++ LR F +M +G VPAIK AA +Q+ I +L+T T+ R Y LI
Sbjct: 61 ACNTASTVVLPALRERF-AMPIVGTVPAIKPAAQISQTKTIGLLATKGTVTRPYVDELIE 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
Y C + + S L VEE + ++K + + D ++L CTH+
Sbjct: 120 RYAKDCVVERIGSTDLVEIVEEKQQTGSVDMQRLQKVVAEW---QSHPTLDTVILGCTHF 176
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
PL+ +QL P ++D+ + IA R LL + + ++ F + + ++R
Sbjct: 177 PLVKEELQQLLPRVSFFVDSGNRIANRVVSLLQDVKRNVNNENKENQAFCTQNSEDFLKR 236
Query: 263 --LMQGFGLK 270
+MQ +G K
Sbjct: 237 EKVMQNWGFK 246
>gi|157959995|ref|YP_001500029.1| glutamate racemase [Shewanella pealeana ATCC 700345]
gi|189030371|sp|A8GYV7|MURI_SHEPA RecName: Full=Glutamate racemase
gi|157844995|gb|ABV85494.1| glutamate racemase [Shewanella pealeana ATCC 700345]
Length = 268
Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 81/261 (31%), Positives = 131/261 (50%), Gaps = 10/261 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSGIGGL + ++R ++P+ Y+ D+ PYG E+ L K + L +
Sbjct: 1 MFGPILIFDSGIGGLSIFDEIRKVLPDQDCCYLFDNARLPYGELEESVLIKGCVELICEQ 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
K L V+ACN+A TL+ LR S+ +G VPAIK AA + + I +L+TP T
Sbjct: 61 ALKIDASLVVVACNSASTLVLPGLRERL-SIPIVGVVPAIKPAAKLSIARHIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT LI + C + L S L E G + +++ ++E +
Sbjct: 120 IKRSYTRELIEQFADGCKVELFGSSELVMLAEAKLAGESVDLIKLRAQLE----PIRQSK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDH 248
D +VL CTH+P+I +Q+ V LD+ +IA+R LL + + R +
Sbjct: 176 LDTLVLGCTHFPIIASEMQQILGNGVKLLDSGVAIAQRVVFLLNEFSLDKVVDNRTKNLT 235
Query: 249 ALFLSGKPDIAM--RRLMQGF 267
A++ + + + R +GF
Sbjct: 236 AIYTTAEISAGLTTRLAEKGF 256
>gi|288819213|ref|YP_003433561.1| glutamate racemase [Hydrogenobacter thermophilus TK-6]
gi|288788613|dbj|BAI70360.1| glutamate racemase [Hydrogenobacter thermophilus TK-6]
gi|308752795|gb|ADO46278.1| glutamate racemase [Hydrogenobacter thermophilus TK-6]
Length = 255
Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 103/230 (44%), Gaps = 10/230 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL++++ P +Y+ D PYG + + + ++ ++
Sbjct: 4 GVFDSGVGGLTVLKEIKKAFPSLDLVYLGDTARVPYGGKSKDTIIRYSLECAEFLI-RFD 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA + D L+ + G + P +++A +++ +I ++ T +T++
Sbjct: 63 IDLLVVACNTASSYALDILKKEL-GIPVFGVIKPGVRKALEVSKNKVIGVIGTKSTIKSG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + ++ + + VEE D + K ++ + + + D +
Sbjct: 122 VYQRSLME--AGSVVYAKACPLFVPLVEEGLT----HGDIVDKVVDFYLRDFKNTQMDTL 175
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+L CTHYPL+ + V +D++ ++ + T R+F
Sbjct: 176 ILGCTHYPLLAEAIKNYMG-DVQIVDSASALVEDISSFVKNEGTSSLRLF 224
>gi|328955986|ref|YP_004373319.1| glutamate racemase [Coriobacterium glomerans PW2]
gi|328456310|gb|AEB07504.1| glutamate racemase [Coriobacterium glomerans PW2]
Length = 309
Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 102/262 (38%), Gaps = 16/262 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG V + + MP +Y+ D PYG ++ + + + ++
Sbjct: 13 DRPIGVFDSGVGGFTVARAISRAMPHESIVYIGDTARCPYGTRGVEEVRAFVAQVGTWLV 72
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + + VIACNTA + F + +G + P + A T++ I +L+T T
Sbjct: 73 -RQRVKVIVIACNTATASALGLAQRMF-DVPVIGVIGPGARAAVLATRTREIGVLATDLT 130
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK------------IKEDEIKKE 179
+ I + + +H ++ VE G E++
Sbjct: 131 IASGAYLRAIKNLDAGVGVHGCATQRFVELVESRLAGGIGADAQWLDGADLFDTPEVRAL 190
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RIN 238
+ G D +VL CTH+PL+V R + V + +++ R +L + +
Sbjct: 191 VRRETEPLRGLDIDAVVLGCTHFPLLVRPIRAVLGRGVHVVSSAEETMRELHEMLACQGH 250
Query: 239 THQTRVFDDHALFLSGKPDIAM 260
+ +H + + A
Sbjct: 251 LAPSTARPEHRFATTSENTSAF 272
>gi|116070411|ref|ZP_01467680.1| Glutamate racemase [Synechococcus sp. BL107]
gi|116065816|gb|EAU71573.1| Glutamate racemase [Synechococcus sp. BL107]
Length = 262
Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 11/254 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
FDSGIGGL VL+++ IY+ D PYG+ ++ + + + D+ Q
Sbjct: 6 GFFDSGIGGLTVLRQVLERHGPVQCIYLGDTARVPYGSRSAPEIRLIAAEVVAWLRDQ-Q 64
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L +D +G + A AAA Q+ + +L+TPAT+
Sbjct: 65 VSTVVMACNTTNALARDVAEGQAGG-PVIGLIGA---AAAMVQTSRVGVLATPATVASEA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I + + + +E + DE+++ + + IV
Sbjct: 121 YRFSIEALHPGTLVVEQACPEFVPLIESG----DLSSDELRRTAKEYLHPLLEASVESIV 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHALFLSG 254
L CTHYPL+ V RQL P V +D + +AR+ +L P+++ + DD ++
Sbjct: 177 LGCTHYPLLEPVLRQLLPDSVQLIDPAVGVARQLDSVLGAPKLSVGEGLHLDDCRFCVTA 236
Query: 255 KPDIAMRRLMQGFG 268
PD R G
Sbjct: 237 DPDGFATRATPWLG 250
>gi|315225613|ref|ZP_07867422.1| glutamate racemase [Capnocytophaga ochracea F0287]
gi|314944430|gb|EFS96470.1| glutamate racemase [Capnocytophaga ochracea F0287]
Length = 269
Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 9/252 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG + +++ LMP + +++AD+ PYG + +L+
Sbjct: 9 APIGLFDSGVGGTTIWKEVNALMPNENTLFIADNKNAPYGEKTKEEIIALCDANTRFLLE 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL
Sbjct: 69 -NNAKIIVVACNTGTTNAISYLRNKYKEVPFIGIEPAIKPASLQSVTKKIGVLATRSTLA 127
Query: 134 RTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Q I L +E +IK E+ + + +
Sbjct: 128 SDLFAKTSEHLKQEEQVEIIEQVGEGLVDLIEAG----RIKSPEMTLLLRKYLLPMVAEG 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HA 249
D +VL CTHYP ++ ++L P + +D+ ++A++ R +L + + + H
Sbjct: 184 IDYLVLGCTHYPYLLPQIQELIPPHIKVIDSGYAVAKQTRNILSQHHLLNDDATAEAQHL 243
Query: 250 LFLSGKPDIAMR 261
+GK ++ +
Sbjct: 244 WLANGKVEVLQQ 255
>gi|222111527|ref|YP_002553791.1| glutamate racemase [Acidovorax ebreus TPSY]
gi|221730971|gb|ACM33791.1| glutamate racemase [Acidovorax ebreus TPSY]
Length = 291
Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 19/276 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I +FDSGIGGL VLQ +R +P HF+Y+AD PYG+ D +++R + + +
Sbjct: 8 RPIGVFDSGIGGLSVLQALRHELPHEHFVYLADSGNAPYGDAKGDAFVQQRTLAIARWLR 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA ++LR+ P + +G PA+K AAA +Q+ + +L+T T+
Sbjct: 68 EHHGIKALVVACNTATAAAVEQLRAALPDLPAIGVEPALKPAAASSQTHHVGVLATRGTV 127
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-- 190
L + + + LA +E+ + + +IE ++ G
Sbjct: 128 GSARFQRLRDGHSAGTRFSVQPCDGLARAIEQ-STEEPLPAAASMAKIEALCVQYTGALG 186
Query: 191 -------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
D +VL CTHY + R L V +D +AR+ R +L + +
Sbjct: 187 TFGLKTGEIDTLVLGCTHYVFAKDMLRALVGPDVQIIDTGAPVARQTRRILDQTHALAPE 246
Query: 244 -------VFDDH-ALFLSGKPDIAMRRLMQGFGLKS 271
H L+ +G+ + L +
Sbjct: 247 HAVDGAPAAPGHIQLYTTGQLAALQSAAERWLQLPA 282
>gi|315080007|gb|EFT51983.1| glutamate racemase [Propionibacterium acnes HL078PA1]
Length = 248
Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 6/247 (2%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 4 PDFDVVDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQ 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ + +IACNTA + + + R + +PA ++A+A T++G I ++
Sbjct: 64 CLDRLVA-HGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVI 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT R + + + V + + VE+ E++
Sbjct: 123 CTEATARSLSYEDALAA-VPGITLTTQACPKFVPFVEDGITSGP----ELETIAREYLAP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D ++L CTHYPL+ + + V + +S AR + L+ + +
Sbjct: 178 IQEAGCDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRE 237
Query: 247 DHALFLS 253
FL+
Sbjct: 238 SSRYFLT 244
>gi|22298004|ref|NP_681251.1| glutamate racemase [Thermosynechococcus elongatus BP-1]
gi|22294182|dbj|BAC08013.1| glutamate racemase [Thermosynechococcus elongatus BP-1]
Length = 297
Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats.
Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 9/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSG+GGL VLQ ++ +P+ F+Y D PYG + + + + +
Sbjct: 15 GAIGVFDSGVGGLTVLQALQSRLPQESFLYFGDTARLPYGTRRRSEILQYVREILRWM-H 73
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
++V+ACNT+ L ++RS F LG VP K A T I +++TPAT+
Sbjct: 74 AQGVKMAVMACNTSSALALTQVRSEF-CFPILGLIVPTAKIAV--TLGKRIGVIATPATV 130
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + I V+ VE ++ D + + +
Sbjct: 131 KSGAYARALQEFSPTVAIAQVACPEFVPLVESNC----LEGDRVHRIVRQTLSPLVEFDP 186
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV++ CTHYP + HV Q P V LD + ++AR A L +N ++
Sbjct: 187 DVLIYGCTHYPHLRHVIEQYVPTTVHHLDPAHAVARAAVRKLEAMNLATPCPQGQVQFYV 246
Query: 253 SGKPDIAMRRLMQGFGL 269
SG P+ + Q G
Sbjct: 247 SGIPEQFAQLASQWLGY 263
>gi|116629100|ref|YP_814272.1| glutamate racemase [Lactobacillus gasseri ATCC 33323]
gi|116094682|gb|ABJ59834.1| glutamate racemase [Lactobacillus gasseri ATCC 33323]
Length = 283
Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 98/265 (36%), Gaps = 15/265 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ +
Sbjct: 18 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSKEEIIS 69
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ +L K + + CNTA + ++ P AA T++
Sbjct: 70 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMSTIKKEIPLQIIGVVQSGALAAARTTETKN 128
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++++ T AT+ I + + + LA EE E+ + +
Sbjct: 129 VAVIGTKATVNSHSYLKEIQYRDPKIQVSEFAQPKLAPLAEE-----DPAEEIKQAVVSE 183
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYPL+ + +D +D +A+ +L R
Sbjct: 184 SLAPLKKADYDTLVLGCTHYPLLRKEIVAVVGQDRKIVDPADQVAQYTYNVLRRDGLFAA 243
Query: 243 RVFD-DHALFLSGKPDIAMRRLMQG 266
D H + +G+ Q
Sbjct: 244 GNSDTKHEYYTTGEAKKFTEITRQW 268
>gi|116493005|ref|YP_804740.1| glutamate racemase [Pediococcus pentosaceus ATCC 25745]
gi|730082|sp|Q08783|MURI_PEDPE RecName: Full=Glutamate racemase
gi|122265531|sp|Q03ES4|MURI_PEDPA RecName: Full=Glutamate racemase
gi|349029|gb|AAA16761.1| glutamate racemase [Pediococcus pentosaceus]
gi|435999|gb|AAC36914.1| glutamate racemase [Pediococcus pentosaceus]
gi|116103155|gb|ABJ68298.1| glutamate racemase [Pediococcus pentosaceus ATCC 25745]
Length = 265
Score = 264 bits (677), Expect = 6e-69, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 16/263 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++ + L+P I++ D+ PYG + +
Sbjct: 1 MDNRP--------IGFMDSGVGGLTVVKTAQKLLPNEEIIFIGDEARMPYGPRPTAEVVE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ S ++ K VIACNTA L++ P + +G + P A T++
Sbjct: 53 FSRQMASFLMTK-NIKALVIACNTATNAALAVLQAELP-IPVIGVILPGAIAANRQTKNQ 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T T++ + ++ + V+ E+ ++ +K +
Sbjct: 111 KIGVIATLGTIKSEAYPKALAEINTKLRAYPVACQEFVEIAEKN----ELHTTAAQKVMN 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-H 240
E + D ++L CTH+PL+ + V +D + +L + H
Sbjct: 167 EKLAEFRQDQIDTLILGCTHFPLLEEGIQAAVGPDVTLVDPGVETVHQLIEILTKQALQH 226
Query: 241 QTRVFDDHALFLSGKPDIAMRRL 263
+ +G
Sbjct: 227 AEGPKAQDQYYSTGNIKNFEEIA 249
>gi|300857321|ref|YP_003782305.1| glutamate racemase [Clostridium ljungdahlii DSM 13528]
gi|300437436|gb|ADK17203.1| glutamate racemase [Clostridium ljungdahlii DSM 13528]
Length = 261
Score = 264 bits (677), Expect = 7e-69, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 7/251 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSGIGG+ VL++ ++ F+Y D PYG + KRL F ++L
Sbjct: 5 DRPIGFFDSGIGGISVLKEAVKILSNEDFVYFGDSKMAPYGVKTAEEV-KRLTFNAVELL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
V+ACNTA + +LR + SM +G PA+K A + + G I I++T T
Sbjct: 64 LTKNIKALVVACNTATSAAIIDLRKKYSKSMPIIGIEPALKPAVEFNRKGKIVIMATTMT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L SNL+ Y S+ I + L +E+ K + +E++ ++ + +
Sbjct: 124 LSERKFSNLMKKYESRSSIQPLPCPGLVELIEQG----KTEGEEVEGYLKEKLNSLKDEG 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250
+VL CTHYP + R++ + +D S + + L + + + +
Sbjct: 180 IAAVVLGCTHYPFVKKSIRKILNEDIPIIDGSKGTVEQLKRQLVKYHIKNNKNKAGKVTI 239
Query: 251 FLSGKPDIAMR 261
F S + ++
Sbjct: 240 FNSMDSEFIIQ 250
>gi|121595188|ref|YP_987084.1| glutamate racemase [Acidovorax sp. JS42]
gi|120607268|gb|ABM43008.1| glutamate racemase [Acidovorax sp. JS42]
Length = 291
Score = 264 bits (677), Expect = 8e-69, Method: Composition-based stats.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 19/276 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I +FDSGIGGL VLQ +R +P HF+Y+AD PYG+ D +++R + + +
Sbjct: 8 RPIGVFDSGIGGLSVLQALRHELPHEHFVYLADSGNAPYGDAKGDAFVQQRTLAIARWLR 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA ++LR+ P + +G PA+K AAA +Q+ + +L+T T+
Sbjct: 68 EHHGIKALVVACNTATAAAVEQLRAALPDLPAIGVEPALKPAAASSQTHHVGVLATRGTV 127
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-- 190
L + + + LA +E+ + + +IE ++ G
Sbjct: 128 GSARFQRLRDGHSAGTRFSVQPCDGLARAIEQ-STEEPLPAAASMAKIEALCVQYTGALG 186
Query: 191 -------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
D +VL CTHY + R L V +D +AR+ R +L +
Sbjct: 187 TFGLKTGEIDTLVLGCTHYVFAKDMLRALVGPDVQIIDTGAPVARQTRRILDQAGALAPE 246
Query: 244 --------VFDDHALFLSGKPDIAMRRLMQGFGLKS 271
L+ +G+ + L +
Sbjct: 247 HAADGAPAAPGHIQLYTTGQLAALQSAAERWLQLPA 282
>gi|291456377|ref|ZP_06595767.1| glutamate racemase [Bifidobacterium breve DSM 20213]
gi|291381654|gb|EFE89172.1| glutamate racemase [Bifidobacterium breve DSM 20213]
Length = 264
Score = 264 bits (677), Expect = 8e-69, Method: Composition-based stats.
Identities = 61/263 (23%), Positives = 101/263 (38%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG+ V +++ MP H +Y D PYG +K + +
Sbjct: 4 SAPIGVFDSGLGGISVAREIAKDMPAEHVLYFGDSANAPYGVKTPEQVKALSFDIVERFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--------YTQSGLIS 124
+ + VIACNTA + ++LR + + +G PA+K A +
Sbjct: 64 E-HGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDAPLGQQHIPQRVI 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TP TLR + L+ + S I L VE G D + + + F
Sbjct: 122 VAATPLTLRERKFAELMKRFDSDNTIFKEPCPDLVEIVESGQLG---NHDLVMRTLHHYF 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ R D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 179 DRYDLDRIDSVVLGCTHFVFYRDYFRELLPKHAAIIDGNEGTVRHLGVVLESLGKLAPED 238
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
+ P + +L
Sbjct: 239 ALGRVEISNSDPSERIAKLSHNL 261
>gi|298207461|ref|YP_003715640.1| Glutamate racemase [Croceibacter atlanticus HTCC2559]
gi|83850097|gb|EAP87965.1| Glutamate racemase [Croceibacter atlanticus HTCC2559]
Length = 263
Score = 264 bits (677), Expect = 8e-69, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 6/251 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GG + +++ L+P IY+AD PYG + + + ++
Sbjct: 4 NAPIGIFDSGVGGTSIWREIHQLLPLEQTIYLADSKYAPYGEKTKDEIVELSIKNTEKLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ V ACNTA T LR+ + ++ + PAIK AA T++ + IL+T TL
Sbjct: 64 SLGAKVIIV-ACNTATTNAIKHLRANY-TLPIIAIEPAIKPAALNTKTKAVGILATQGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ Y I V L +E K E+++ ++ K
Sbjct: 122 NSELFTQTSELYARDIDIIEVFGKGLVPEIEAGRQDGK----EVERLLKLYLKPMLDKNI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL C+HYP ++ ++L P V +D+ ++AR+ + +L N +
Sbjct: 178 DYLVLGCSHYPYLIPKLKELLPKTVTIIDSGLAVARQTKAVLEHYNLSAISPQPAPIFYT 237
Query: 253 SGKPDIAMRRL 263
+ +R++
Sbjct: 238 NSDNLEPLRQI 248
>gi|149927946|ref|ZP_01916196.1| glutamate racemase [Limnobacter sp. MED105]
gi|149823385|gb|EDM82618.1| glutamate racemase [Limnobacter sp. MED105]
Length = 278
Score = 264 bits (677), Expect = 8e-69, Method: Composition-based stats.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 10/267 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + ++ +FDSG+GGL VL+ M +P F +VAD+ PYG+ H + R++
Sbjct: 4 PVLLESARAVGVFDSGVGGLSVLKAMLNYLPAERFRFVADERYLPYGDKPQHEITDRVLT 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
L S+ L + V+ACNTA ++ R+ + +G PA+K A+ T++G++ IL
Sbjct: 64 L-SNWLRNQECKAMVMACNTATAAGANQARAAHANWPIVGIEPAVKPASMLTKTGVVGIL 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ L+ + + L +E+ + E I+ ++ E
Sbjct: 123 ATTNTVASERFKGLVERFDPLAKVIAHPCPGLVELIEQ----SPMPEPAIEALLKPVLAE 178
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF- 245
K DVIVL CTHYP + H+ +L+ V ++ +A++ + L
Sbjct: 179 LLQKNADVIVLGCTHYPFVAHLISKLAGPDVTVIETGLPVAKQLKTRLESEGLLNMGEAH 238
Query: 246 ----DDHALFLSGKPDIAMRRLMQGFG 268
+ + F +G+P+ +L+ G
Sbjct: 239 LPMIERVSFFTTGQPEAFKTKLVNLLG 265
>gi|303231315|ref|ZP_07318051.1| glutamate racemase [Veillonella atypica ACS-049-V-Sch6]
gi|302514045|gb|EFL56051.1| glutamate racemase [Veillonella atypica ACS-049-V-Sch6]
Length = 269
Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats.
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 7/254 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ ++ P +FIY+ D+ P GN + + + + L +
Sbjct: 10 PIGVFDSGVGGLSVLKVLQEQFPNENFIYIGDNANNPVGNRPTEEITEIACRIA-ETLHQ 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNT + DE+RS ++ +G +K A + S I I++T AT+
Sbjct: 69 VPVKLMVIACNTFTVVALDEVRSRV-NVPVIGVSQGVKTAIRESNSNTIGIMATVATVNS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + LA +E+ + +D ++K + + DV
Sbjct: 128 HIHKYVAMDIDHEVFVWEQPCPELAGLIEQG----HLHDDAVRKAAKEYLAPMLERDIDV 183
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLS 253
+VL CTH+P + V ++LS + ++D + + R + + H H L+ +
Sbjct: 184 VVLGCTHFPFVSPVLQELSGDRIRYIDPAYETSDLVRRTMDSNHLHNPSTEKGHSTLYFT 243
Query: 254 GKPDIAMRRLMQGF 267
+ Q
Sbjct: 244 KDIALGADLGAQFL 257
>gi|300362243|ref|ZP_07058419.1| glutamate racemase [Lactobacillus gasseri JV-V03]
gi|300353234|gb|EFJ69106.1| glutamate racemase [Lactobacillus gasseri JV-V03]
Length = 283
Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 97/265 (36%), Gaps = 15/265 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ +
Sbjct: 18 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSKEEIIS 69
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ +L K + + CNTA + ++ P AA T++
Sbjct: 70 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMSTIQKEVPLQIIGVVQSGALAAARTTETKN 128
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++++ T AT+ + + + + LA EE E+ + +
Sbjct: 129 VAVIGTKATVNSHSYLKEVQYRDPEIQVSEFAQPKLAPLAEE-----DPAEEIKQAVVSE 183
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTHYPL+ + +D +D +A+ +L R
Sbjct: 184 SLAPLRNINYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDGLFAA 243
Query: 243 RVFD-DHALFLSGKPDIAMRRLMQG 266
D H + +G+ Q
Sbjct: 244 DDSDTTHEYYTTGEAKKFTEITRQW 268
>gi|251778481|ref|ZP_04821401.1| glutamate racemase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243082796|gb|EES48686.1| glutamate racemase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 258
Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 5/233 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I FDSG+GGL V+++ LMP ++IY D PYG ++
Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAICLMPNENYIYFGDSKNAPYGIKTVEEVRTLTFNAVES 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L++ V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP
Sbjct: 63 LLEQ-NVKAIVVACNTATSAAIDLVRSKYKNIPIIGIEPALKLATKYNRKGNIIIMATPM 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ +L+ Y I + L +E + E+ +K++ + +
Sbjct: 122 TLKEKKFKSLMEKYGENYDIVSLPCAKLVEFIEHGILNGEELEEYLKEKFKSY----KNN 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
V+VL CTHYP I ++ + +D ++ R L N T
Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTE 230
>gi|170694655|ref|ZP_02885807.1| glutamate racemase [Burkholderia graminis C4D1M]
gi|170140537|gb|EDT08713.1| glutamate racemase [Burkholderia graminis C4D1M]
Length = 295
Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 9/246 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L
Sbjct: 20 RAPVGIFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFIADRTLAI-GEWL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ ++ACNTA +R S+ +G P IK AA +++ + +L+T TL
Sbjct: 79 ARQGAKALIVACNTATAQSIALVREKL-SIPLVGVEPGIKPAALQSKTRVAGVLATQVTL 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE + E++ +
Sbjct: 138 RSARFQALLERYAADCRFICQPGHGLVQAVER----CDVGSTELRALLASYLEPMLAAGA 193
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDHA 249
D +VL CTHYP + R + + +D S +IAR+ +L + T +T
Sbjct: 194 DTLVLGCTHYPFLDAAIRDIVGDRMALIDTSVAIARQLERVLEQHGVRATPETAGAPPPR 253
Query: 250 LFLSGK 255
+ +
Sbjct: 254 FYSTDN 259
>gi|313159357|gb|EFR58721.1| glutamate racemase [Alistipes sp. HGB5]
Length = 257
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 6/242 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I ++DSG+GGL V +++R ++P +Y+ D PYG+ +++ + ++
Sbjct: 3 DAPIGVYDSGLGGLTVWREVRRMLPSESLVYLGDGKNCPYGSRPREEVRRLADEAVASLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA D LR + M +G PA+K A T+SG++ +L+T +L
Sbjct: 63 AQG-CKMVVVACNTATAAAIDFLREKYAPMPIVGMEPAVKPACLNTRSGVVGVLATERSL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y S + VE E ++ +
Sbjct: 122 DGELFRRTAAKYGSGVELITAPGRGFVELVESDRESTPEAEQAVRDAVAVML----EHGA 177
Query: 193 DVIVLACTHYPLIVHVFRQLS-PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D IVL CTHYP ++ V ++ V+ +D S ++ARR LL + H F
Sbjct: 178 DQIVLGCTHYPFLLPVLERVVAGRGVEIVDPSPAVARRVVQLLDQYGLHAAPDHVPSYTF 237
Query: 252 LS 253
+
Sbjct: 238 RT 239
>gi|158423846|ref|YP_001525138.1| glutamate racemase [Azorhizobium caulinodans ORS 571]
gi|158330735|dbj|BAF88220.1| glutamate racemase [Azorhizobium caulinodans ORS 571]
Length = 288
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 138/221 (62%), Gaps = 1/221 (0%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL V +++ P+ FIY ADD FPYG D AL R+ + ++
Sbjct: 21 PTILVFDSGLGGLSVFREVARARPDASFIYAADDAAFPYGALSDAALVARVSSVMDTLIA 80
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+P L V+ACNTA TL LR+ + F+G VPA+K A A + + +S+L+TP T+R
Sbjct: 81 ATRPTLVVVACNTASTLALPTLRAAH-GLPFVGTVPAVKPACAASVTRKVSVLATPGTVR 139
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT++L+ + C + LV S LA E G I +++++ EI CF+ E RTD
Sbjct: 140 RDYTASLVRDFAGSCEVTLVPSPRLAELAEAVMRGAAIDDEDLRAEIAPCFVRSETGRTD 199
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VLACTHYPLIV R+++PWPV+++D + +IARR LL
Sbjct: 200 TVVLACTHYPLIVDQLRRVAPWPVNFVDPAPAIARRVASLL 240
>gi|258544909|ref|ZP_05705143.1| glutamate racemase [Cardiobacterium hominis ATCC 15826]
gi|258519829|gb|EEV88688.1| glutamate racemase [Cardiobacterium hominis ATCC 15826]
Length = 272
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V++ + +P H IY D PYG ++ + +L
Sbjct: 9 NRPIGVFDSGVGGLTVVRALMERLPLEHLIYYGDTARVPYGVKSRATIETYSAQIVEYLL 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPAT 131
+ L VIACNT + D +R+ + L + A QAA T Q+ I++++T T
Sbjct: 69 AQRVKAL-VIACNTIAAVAGDSIRAQARGLPVLDVITAGAQAALQTSQNHHIAVIATNTT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH++ Q + + +L VEE + +++ ++ +
Sbjct: 128 VNSNAYARAIHAHDPQARVQSQACPLLVPLVEEGWLEHDVTRLTVREYLKPILAD----D 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ + R+ +P + +D++ + A L + H +
Sbjct: 184 ADTLVLGCTHYPLLKPLLREEAP-RLALVDSATTTAAHTAQALTAAGLLRQSGDSAHYRY 242
Query: 252 LSGKPDIAMRRLMQGF 267
+ R + + F
Sbjct: 243 CVSDIPLRFRAIGERF 258
>gi|46204044|ref|ZP_00050583.2| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1]
Length = 277
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 107/264 (40%), Positives = 156/264 (59%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + IL+FDSG+GGL VL+++R P+ H++Y ADD FPYG + L R++ +
Sbjct: 4 QASEPVILVFDSGLGGLTVLEQVRRARPDAHYLYAADDAAFPYGRLSEPQLVARVIAVME 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L +Y P L VIACNTA T++ LR F F+G VP IK AAA T+S L+S+L+TP
Sbjct: 64 RLLTRYAPDLVVIACNTASTVVLPALRQRF-VTPFVGVVPPIKPAAALTRSRLVSLLATP 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188
T+ R YT +L+ ++ + C + LV S LA E G + + I EI CF+ +
Sbjct: 123 GTVARAYTHDLVENFAADCAVTLVGSQNLARYAEAEMAGAPVADAAILAEIAPCFVTGAD 182
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G+RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL +
Sbjct: 183 GRRTDVVCLSCTHYPLLLGRFERLAPWPVIWIDPAPAIARRVVQLLGAALAARPEPPAAR 242
Query: 249 ALFLSG---KPDIAMRRLMQGFGL 269
A+F G P A+ R ++ GL
Sbjct: 243 AIFTGGGGLNP--ALGRSLERRGL 264
>gi|42518578|ref|NP_964508.1| glutamate racemase [Lactobacillus johnsonii NCC 533]
gi|81668196|sp|Q74KU5|MURI_LACJO RecName: Full=Glutamate racemase
gi|41582863|gb|AAS08474.1| glutamate racemase [Lactobacillus johnsonii NCC 533]
Length = 266
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 97/265 (36%), Gaps = 15/265 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ +
Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ +L K + + CNTA + ++ P AA T++
Sbjct: 53 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMATIQKEIPLQIIGVVQSGALAAARTTETKN 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++++ T AT+ I + + + LA EE ED +
Sbjct: 112 VAVIGTKATVASHSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----DPDEDTKNAVVSE 166
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYPL+ + +D +D +A+ +L R +
Sbjct: 167 SLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFAE 226
Query: 243 RVFD-DHALFLSGKPDIAMRRLMQG 266
H + +G+ Q
Sbjct: 227 STAPVKHDYYTTGEAKKFTEITRQW 251
>gi|6980778|pdb|1B73|A Chain A, Glutamate Racemase From Aquifex Pyrophilus
gi|6980779|pdb|1B74|A Chain A, Glutamate Racemase From Aquifex Pyrophilus
Length = 254
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 15/239 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ +R + +Y+ D PYG + + + + DK
Sbjct: 3 IGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA + L+ F P +K+A +++ I ++ TPAT++
Sbjct: 63 -VDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + + A EE +I +K +E E +GK D +
Sbjct: 122 AYQRKLEE--GGADVFAKACPLFAPLAEEGLLEGEIT----RKVVEHYLKEFKGK-IDTL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+L CTHYPL+ ++ + +D+S++++ L N + LF +
Sbjct: 175 ILGCTHYPLLKKEIKKFLG-DAEVVDSSEALS------LSLHNFIKDDGSSSLELFFTD 226
>gi|257451947|ref|ZP_05617246.1| glutamate racemase [Fusobacterium sp. 3_1_5R]
gi|317058497|ref|ZP_07922982.1| glutamate racemase [Fusobacterium sp. 3_1_5R]
gi|313684173|gb|EFS21008.1| glutamate racemase [Fusobacterium sp. 3_1_5R]
Length = 261
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 6/240 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL + ++P+ +FIY AD PYG + K ++ K
Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADVDHVPYGTKTKEEIIKYTSEAVDFLV-KE 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA + ELR + S+ +G PA+K+A + + +++TP T++
Sbjct: 62 GVKAIVIACNTATSAAIQELRERY-SLPIIGMEPAVKKAIDFHPEKRVLVIATPMTVQGE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NLI ++ + ++ L + EE +++ + ++ F + + I
Sbjct: 121 KLHNLIEKVDTEHLVDAIALPKLVTFAEEEM----FEDEVVSAYLQEEFKQLNLEDYSSI 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ ++L P V +LD ++ ++ L IN + + SG+
Sbjct: 177 VLGCTHFNYFKESLKKLLPKGVKFLDGNEGTIKKLISELENINALEKNEKRKIEYYYSGR 236
>gi|291533966|emb|CBL07079.1| glutamate racemase [Megamonas hypermegale ART12/1]
Length = 270
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 6/235 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++R L+P +FI+V D PYG+ + L
Sbjct: 4 NSPIGVFDSGLGGLTVLKELRRLLPHENFIFVGDSARAPYGSRTPEEIISFLQQFMDYFQ 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ ++V ACNT + ++ S A + PAI A + + I +++T AT+
Sbjct: 64 SRG-VKMAVCACNTMTSYGYPVIKDK-TSFALVPMNPAIIPAVKASANKHIGVIATEATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + Q + V +E I +D I + ++ + +
Sbjct: 122 KKGMHKQAASNLDPQIKVFGVGCPKFVPLIETG----HIHDDAIDEAVQEYADKFKTSDI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
++L CTHYP+I V + V ++ + A+ A +L + N T+
Sbjct: 178 HSLILGCTHYPIISEVLTKHFGKDVALINPALETAKDAATILTKNNLLNTQEQSG 232
>gi|307730275|ref|YP_003907499.1| glutamate racemase [Burkholderia sp. CCGE1003]
gi|307584810|gb|ADN58208.1| glutamate racemase [Burkholderia sp. CCGE1003]
Length = 290
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 9/250 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + +
Sbjct: 14 AHPASRAPVGIFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFIADRTLAI 73
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L + VIACNTA +R S+ +G P IK AA ++S + +L+
Sbjct: 74 -GEWLARQGAKALVIACNTATAQSIALVRERL-SIPLVGVEPGIKPAALQSRSRVAGVLA 131
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TLR T L+ Y + C L VE + +++ + G
Sbjct: 132 TQVTLRSTRFQALLERYAADCRFICQPGHGLVQAVER----CDVGSAQLRALLAGYLQPM 187
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTHYP + R + + +D S +IAR+ +L +
Sbjct: 188 LEAGADTLVLGCTHYPFLDAAIRDIVGERMALIDTSVAIARQLERVLEQHGLRAAPHATG 247
Query: 248 H---ALFLSG 254
F +
Sbjct: 248 APLPRFFSTD 257
>gi|241763139|ref|ZP_04761199.1| glutamate racemase [Acidovorax delafieldii 2AN]
gi|241367764|gb|EER62018.1| glutamate racemase [Acidovorax delafieldii 2AN]
Length = 284
Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 68/246 (27%), Positives = 104/246 (42%), Gaps = 8/246 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ +SI +FDSG+GGL VL+ + +P F+Y+AD PYG D + +R +
Sbjct: 1 MPQASSSIGVFDSGVGGLSVLRALIAALPHERFVYLADSGNAPYGERGDAFVARRTHAIT 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ +Y V+ACNTA E+RS P + +G PA+K A T +G I +L T
Sbjct: 61 DYLQSQYDIKALVVACNTATAAAIHEVRSAHPELPLVGVEPALKPAVGLTHTGRIGVLGT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIEGCFI 185
TL L S Q + LA +E + G E E
Sbjct: 121 RGTLTSAKFGRLQASLAGQAEFVVQPCDGLAHAIERSVGWPSGPNAPGTETFALCEKYLA 180
Query: 186 EKEGKR-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D +VL CTHY + R L V ++ + +AR+ R LL + +
Sbjct: 181 SMKPFGSAPGSIDTLVLGCTHYVFVEEALRSLVGPQVQMIETGEPVARQTRRLLEQESLL 240
Query: 241 QTRVFD 246
+ +
Sbjct: 241 ASDDPN 246
>gi|23336033|ref|ZP_00121262.1| COG0796: Glutamate racemase [Bifidobacterium longum DJO10A]
gi|23464712|ref|NP_695315.1| glutamate racemase [Bifidobacterium longum NCC2705]
gi|189438967|ref|YP_001954048.1| glutamate racemase [Bifidobacterium longum DJO10A]
gi|227546821|ref|ZP_03976870.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239620799|ref|ZP_04663830.1| glutamate racemase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|317481620|ref|ZP_07940656.1| Asp/Glu/Hydantoin racemase [Bifidobacterium sp. 12_1_47BFAA]
gi|322689588|ref|YP_004209322.1| glutamate racemase [Bifidobacterium longum subsp. infantis 157F]
gi|322691549|ref|YP_004221119.1| glutamate racemase [Bifidobacterium longum subsp. longum JCM 1217]
gi|29839545|sp|Q8G7Z8|MURI_BIFLO RecName: Full=Glutamate racemase
gi|229486231|sp|B3DQ51|MURI_BIFLD RecName: Full=Glutamate racemase
gi|23325278|gb|AAN23951.1| glutamate racemase [Bifidobacterium longum NCC2705]
gi|189427402|gb|ACD97550.1| Glutamate racemase [Bifidobacterium longum DJO10A]
gi|227212783|gb|EEI80664.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239516375|gb|EEQ56242.1| glutamate racemase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|316916980|gb|EFV38366.1| Asp/Glu/Hydantoin racemase [Bifidobacterium sp. 12_1_47BFAA]
gi|320456405|dbj|BAJ67027.1| glutamate racemase [Bifidobacterium longum subsp. longum JCM 1217]
gi|320460924|dbj|BAJ71544.1| glutamate racemase [Bifidobacterium longum subsp. infantis 157F]
Length = 264
Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 102/263 (38%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG+ V +++ MP H +Y D PYG ++ + +
Sbjct: 4 SAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVERFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--------GLIS 124
+ VIACNTA + ++LR + + +G PA+K A +
Sbjct: 64 -RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TP TLR + L+ + S I L VE G D + + + G F
Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + + D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPED 238
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
+ P + L +
Sbjct: 239 ATGGVELANSDPSERIAELSRKL 261
>gi|329666855|gb|AEB92803.1| glutamate racemase [Lactobacillus johnsonii DPC 6026]
Length = 266
Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 97/265 (36%), Gaps = 15/265 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ +
Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ +L K + + CNTA + ++ P AA T++
Sbjct: 53 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMATIQKEIPLQIIGVVQSGALAAARTTETKN 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++++ T AT+ I + + + LA EE ED +
Sbjct: 112 VAVIGTKATVASHSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----DPDEDTKSAVVSE 166
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYPL+ + +D +D +A+ +L R +
Sbjct: 167 SLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFAE 226
Query: 243 RVFD-DHALFLSGKPDIAMRRLMQG 266
H + +G+ Q
Sbjct: 227 STDPVKHDYYTTGEAKKFTEITRQW 251
>gi|238853843|ref|ZP_04644208.1| glutamate racemase [Lactobacillus gasseri 202-4]
gi|311111115|ref|ZP_07712512.1| glutamate racemase [Lactobacillus gasseri MV-22]
gi|238833538|gb|EEQ25810.1| glutamate racemase [Lactobacillus gasseri 202-4]
gi|311066269|gb|EFQ46609.1| glutamate racemase [Lactobacillus gasseri MV-22]
Length = 266
Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 98/265 (36%), Gaps = 15/265 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ +
Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSKEEIIS 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ +L K + + CNTA + ++ P AA T++
Sbjct: 53 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMSTIKKEIPLQIIGVVQSGALAAARTTETKN 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++++ T AT+ I + + + LA EE E+ + +
Sbjct: 112 VAVIGTKATVNSHSYLKEIQYRDPKIQVSEFAQPKLAPLAEE-----DPAEEIKQAVVSE 166
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYPL+ + +D +D +A+ +L R
Sbjct: 167 SLAPLKKADYDTLVLGCTHYPLLRKEIVAVVGQDRKIVDPADQVAQYTYNVLRRDGLFAA 226
Query: 243 RVFD-DHALFLSGKPDIAMRRLMQG 266
D H + +G+ Q
Sbjct: 227 GNSDTKHEYYTTGEAKKFTEITRQW 251
>gi|288800322|ref|ZP_06405780.1| glutamate racemase [Prevotella sp. oral taxon 299 str. F0039]
gi|288332535|gb|EFC71015.1| glutamate racemase [Prevotella sp. oral taxon 299 str. F0039]
Length = 281
Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 12/262 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + I +FDSG GGL +L+ R +P+Y++IY+ D+ PYG+ + +
Sbjct: 5 QNNIAGPIGVFDSGYGGLTILEAFRKELPQYNYIYLGDNARAPYGSRSFDVVYEFTRQAV 64
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDEL-RSTFPSM-----AFLGAV-PAIKQAAAYTQSG 121
+ + L ++ CNTA + R P M LG + P ++ T +
Sbjct: 65 MKLFE-LGCRLIILGCNTASAKALRTIQRHDLPQMDNSLRRVLGIIHPTVEVIGDLTHTN 123
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ IL+T T++ + I+ + VS + +E + + +KK I+
Sbjct: 124 HVGILATEGTIKSNSYALEINKLHPDITVTGVSCPLWVPIIENNEADGEGADYFVKKRID 183
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
I + D ++L CTHYPL++ ++ +P V + +A+ L R + +
Sbjct: 184 T--IMSLDSQIDTLILGCTHYPLLLPKIKKYTPKGVQVVAQGQYVAKSLANYLQRHSDIE 241
Query: 242 TRVFDD--HALFLSGKPDIAMR 261
+ + +
Sbjct: 242 QLCIKQGVTQYYTTENAERFKE 263
>gi|120434578|ref|YP_956873.1| glutamate racemase [Gramella forsetii KT0803]
gi|117576728|emb|CAL65197.1| glutamate racemase [Gramella forsetii KT0803]
Length = 264
Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 8/252 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GG + +++ L+P + IY++D PYG + + + +L
Sbjct: 5 RPIGIFDSGVGGTSIWKEIHRLLPLENTIYLSDSRNAPYGIKTQEKIIQLSIKNTEKLL- 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K L V+ACNTA T LRS + + A +G PAIK AA + + I IL+T TL
Sbjct: 64 KLDCKLIVVACNTATTNAIRILRSAYKT-AIIGIEPAIKPAALKSANKAIGILATRGTLT 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ Y ++ V L +E K DE KK + G + D
Sbjct: 123 SELFAQTSELYTRDINVIEVEGNGLVELIENG----KKDADETKKLLLGLLDPMLKAKID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--ALF 251
+VL C+HYP ++ + ++ P V +D+ +++AR+ + +L + +
Sbjct: 179 YLVLGCSHYPYLIPLLEEILPPEVKIIDSGEAVARQTKNILENNGLLNISKENTRTPEFY 238
Query: 252 LSGKPDIAMRRL 263
+ P + +
Sbjct: 239 TNSDPQVLSDII 250
>gi|108804439|ref|YP_644376.1| glutamate racemase [Rubrobacter xylanophilus DSM 9941]
gi|108765682|gb|ABG04564.1| glutamate racemase [Rubrobacter xylanophilus DSM 9941]
Length = 281
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 96/251 (38%), Gaps = 9/251 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL ++R +P H IY D PYG + ++ + ++
Sbjct: 5 RPIGVFDSGVGGLTVLAEIRDRLPYEHTIYFGDTARVPYGVRDLAEVRWFAYEIIRYLVS 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + +F P + A T++ + +L+TPAT+
Sbjct: 65 -LNVKLVVIACNTATAAALMTAQRSFDVPIIGVIEPGARAAVLETRNRRVGVLATPATVE 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I + ++ ++ +E E++ + + D
Sbjct: 124 SGAYAKAISYLDAGIEVYEQAAPEFVPLIERGITSGP----ELEAAARRYLAPLQERGAD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ----TRVFDDHA 249
V++L CTHYPLI ++ V + ++ A +L R +
Sbjct: 180 VVILGCTHYPLISETINRILGPRVRLISSAGQTALEVGRVLSRRGYLRRPRHAEDLGSSV 239
Query: 250 LFLSGKPDIAM 260
+ P+
Sbjct: 240 YVCTADPEEFA 250
>gi|326693298|ref|ZP_08230303.1| glutamate racemase [Leuconostoc argentinum KCTC 3773]
Length = 281
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 93/258 (36%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I DSG+GGL V++ + +P FI++ D PYG + + +L
Sbjct: 4 NNPIGFVDSGVGGLTVVKAAQDQLPHEQFIFIGDTARMPYGPRPVQEVIDYTFQMAQFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
L VIACNTA +L++ P + +G + P AAA T + I +++T T
Sbjct: 64 TVKHIKLLVIACNTATARALPQLQAQLP-IPVIGVIVPGATAAAATTGNQKIGVIATQGT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I + + I + E +D + + + +
Sbjct: 123 VTSGAYQDEIQAVNADVTIFQQAEPDFVQLAEANLAQAATTKDIVAQHLAS----LTAQG 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHA 249
D +VL CTH+PL+ V +D + L + H D
Sbjct: 179 IDTLVLGCTHFPLLAEAITAAVGPNVKLVDPGRKTVQVIIDTLDQQALHTAVPHRHADDI 238
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ + +P
Sbjct: 239 FYTTKEPATFKAIATDWL 256
>gi|153952784|ref|YP_001393549.1| glutamate racemase [Clostridium kluyveri DSM 555]
gi|219853449|ref|YP_002470571.1| hypothetical protein CKR_0106 [Clostridium kluyveri NBRC 12016]
gi|189030359|sp|A5N4H0|MURI_CLOK5 RecName: Full=Glutamate racemase
gi|254766113|sp|B9DY32|MURI_CLOK1 RecName: Full=Glutamate racemase
gi|146345665|gb|EDK32201.1| MurI [Clostridium kluyveri DSM 555]
gi|219567173|dbj|BAH05157.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 257
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GG+ VL++ ++ +F+Y D PYG +KK +L
Sbjct: 5 DRPIGFFDSGVGGISVLKEAVKILSNENFVYFGDSKMAPYGVRTVEEVKKLTFNAVEFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
K V+ACNTA + +LR + M +G PA+K A + G I I++TP T
Sbjct: 65 KK-NIKALVVACNTATSAAIIDLRKAYSKYMPIVGIEPALKPAVECNRKGNIIIMATPMT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + +NL+ Y S +I + L +EE K + +EI++ +E I +G
Sbjct: 124 LAESKFNNLMKRY-SNSNILPLPCSGLVELIEEG----KTEGEEIERYLEEKLIPLKGNG 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+VL CTHYP I ++ V LD S R+ + L + + +
Sbjct: 179 IAAVVLGCTHYPFIKKSISKVLNQDVLILDGSKGTVRQLKRQLIKYHIESNK 230
>gi|257467248|ref|ZP_05631559.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563]
gi|315918376|ref|ZP_07914616.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563]
gi|313692251|gb|EFS29086.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563]
Length = 261
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 6/240 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL + ++P+ +FIY AD PYG + K ++ K
Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADVDHVPYGTKTKEEIIKYTSEAVDFLV-KE 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA + ELR + S+ +G PA+K+A + + +++TP T++
Sbjct: 62 GVKAIVIACNTATSAAIQELRERY-SLPIIGMEPAVKKAIDFHPEKRVLVIATPMTVQGE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NLI ++ + ++ L + EE +++ I ++ F + + I
Sbjct: 121 KLHNLIEKVDTEHLVDAIALPKLVTFAEE----EIFEDEVISAYLQEEFKQLNLEDYSSI 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ ++L P V +LD ++ ++ L IN + + SG+
Sbjct: 177 VLGCTHFNYFKESLKKLLPKGVKFLDGNEGTIKKLISELENINALEKNEKRKIEYYYSGR 236
>gi|171742432|ref|ZP_02918239.1| hypothetical protein BIFDEN_01543 [Bifidobacterium dentium ATCC
27678]
gi|171278046|gb|EDT45707.1| hypothetical protein BIFDEN_01543 [Bifidobacterium dentium ATCC
27678]
Length = 262
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 97/256 (37%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ V +++R MP +Y D PYG ++ + +
Sbjct: 9 APIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTKTPKQVRDLSFAIVERFV- 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
+ VIACNTA + D LR + + +G PA+K A Q + + +TP T
Sbjct: 68 QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
LR + L+ + S I L VE+ D + + + F +
Sbjct: 127 LRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRYDLST 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+ FR+L P +D + R +L +
Sbjct: 184 IDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVGGIEL 243
Query: 252 LSGKPDIAMRRLMQGF 267
+ + L +
Sbjct: 244 ANSDTSERIAELAEAL 259
>gi|319794071|ref|YP_004155711.1| glutamate racemase [Variovorax paradoxus EPS]
gi|315596534|gb|ADU37600.1| glutamate racemase [Variovorax paradoxus EPS]
Length = 265
Score = 262 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 12/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL VL +R +P F+Y AD PYG D + +R + ++
Sbjct: 2 KPVGVFDSGVGGLSVLAALRAELPHERFVYFADTAFAPYGERGDDYVIERSRKVTEQLIA 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ V+ACNTA T LR+ P++ +G PA+K A A +++G IS+++T TL
Sbjct: 62 EHGIGALVVACNTATTAAIHLLRAEHPALPIVGLEPALKPAVATSRTGHISVMATRGTLA 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-----E 188
+ L S+ + V L +E + + I E
Sbjct: 122 SAKYAALRDSFAGSATVRAVPCDGLVKAIE------GLDTEAIATLCARYMAEAGPFGDA 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTHYPL+ ++ +P + ++D +A++ R +L
Sbjct: 176 AGEVDTVVLGCTHYPLVKDQLQRHAPATLRFIDTGAPVAQQTRRVLTAAGRLSGGE-GGL 234
Query: 249 ALFLSGKPDIAMRRLMQGF 267
L SG + +
Sbjct: 235 ILQSSGDQSVLEVAAARWL 253
>gi|269795791|ref|YP_003315246.1| glutamate racemase [Sanguibacter keddieii DSM 10542]
gi|269097976|gb|ACZ22412.1| glutamate racemase [Sanguibacter keddieii DSM 10542]
Length = 268
Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 12/262 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P Y+ D PYG ++ + + ++
Sbjct: 3 NAPIGIFDSGVGGLTVARSILDQLPHESIHYIGDTRHSPYGPKPLATVRALALDVMDSLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAV-PAIKQAAAYTQSGLISILST 128
D+ + VIACN+A + + R + + + + PA ++A A T++G + ++ T
Sbjct: 63 DQG-VKMLVIACNSASAAVLRDARERYTVRHGIPVVEVILPAARRAVAATRTGRVGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + + + + S VE + +
Sbjct: 122 RATIESRAYEDAL-AVAAGISVTGQACPDFVSLVESGVTSGP----AVLEVSRRYLEPVI 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD- 247
D ++L CTHYPL+ + V + +++ A+ L + +
Sbjct: 177 AADVDTLILGCTHYPLLTGAISYVMGESVTLVSSAEETAKDVYRTLVAHDLARDENAGPA 236
Query: 248 -HALFLSGKPDIAMRRLMQGFG 268
H +G + G
Sbjct: 237 THRFQSTGDTSSFSVLARRFLG 258
>gi|283456482|ref|YP_003361046.1| glutamate racemase [Bifidobacterium dentium Bd1]
gi|283103116|gb|ADB10222.1| MurI Glutamate racemase [Bifidobacterium dentium Bd1]
Length = 258
Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 97/256 (37%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ V +++R MP +Y D PYG ++ + +
Sbjct: 5 APIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTKTPKQVRDLSFAIVERFV- 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
+ VIACNTA + D LR + + +G PA+K A Q + + +TP T
Sbjct: 64 QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
LR + L+ + S I L VE+ D + + + F +
Sbjct: 123 LRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRYDLST 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+ FR+L P +D + R +L +
Sbjct: 180 IDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVGGIEL 239
Query: 252 LSGKPDIAMRRLMQGF 267
+ + L +
Sbjct: 240 ANSDTSERIAELAEAL 255
>gi|306822342|ref|ZP_07455721.1| glutamate racemase [Bifidobacterium dentium ATCC 27679]
gi|304554340|gb|EFM42248.1| glutamate racemase [Bifidobacterium dentium ATCC 27679]
Length = 262
Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 97/256 (37%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ V +++R MP +Y D PYG ++ + +
Sbjct: 9 APIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTRTPKQVRDLSFAIVERFV- 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
+ VIACNTA + D LR + + +G PA+K A Q + + +TP T
Sbjct: 68 QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
LR + L+ + S I L VE+ D + + + F +
Sbjct: 127 LRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRYDLST 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+ FR+L P +D + R +L +
Sbjct: 184 IDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVGGIEL 243
Query: 252 LSGKPDIAMRRLMQGF 267
+ + L +
Sbjct: 244 ANSDTSERIAELAEAL 259
>gi|291280169|ref|YP_003497004.1| glutamate racemase [Deferribacter desulfuricans SSM1]
gi|290754871|dbj|BAI81248.1| glutamate racemase [Deferribacter desulfuricans SSM1]
Length = 253
Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 8/220 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSGIGGL V + + P+ Y D PYG + K ++
Sbjct: 2 AIGVFDSGIGGLTVFRTIAKEFPKLDIYYFGDTARVPYGIRSKDTIIKYTTECIDYLVKH 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
Y VIACN+A + D L+ F ++ LG + P ++ A T++ I ++ T AT+
Sbjct: 62 YNLEAIVIACNSASSYAIDSLKIKF-NLPVLGVIDPGVRAALTTTKTNNILVIGTKATVN 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
N I+ I+ + + VEE K+ E +K+ + + D
Sbjct: 121 SNAYPNKINQISPLTKIYQQACPLFVPIVEEGLFNHKVAETMVKEYLSPYI-----DKID 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
++L CTHYPL+ +L P ++ +D+S +I R L
Sbjct: 176 TVILGCTHYPLLKETISKLYP-DLNLVDSSIAILDDLRNL 214
>gi|309802168|ref|ZP_07696277.1| glutamate racemase [Bifidobacterium dentium JCVIHMP022]
gi|308221248|gb|EFO77551.1| glutamate racemase [Bifidobacterium dentium JCVIHMP022]
Length = 258
Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 97/256 (37%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ V +++R MP +Y D PYG ++ + +
Sbjct: 5 APIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTRTPKQVRDLSFAIVERFV- 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
+ VIACNTA + D LR + + +G PA+K A Q + + +TP T
Sbjct: 64 QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAATPLT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
LR + L+ + S I L VE+ D + + + F +
Sbjct: 123 LRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRYDLST 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+ FR+L P +D + R +L +
Sbjct: 180 IDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVGGIEL 239
Query: 252 LSGKPDIAMRRLMQGF 267
+ + L +
Sbjct: 240 ANSDTSERIAELAEAL 255
>gi|323706012|ref|ZP_08117582.1| glutamate racemase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534626|gb|EGB24407.1| glutamate racemase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 263
Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 9/247 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+K++ L+P +IY D PYG+ ++ + + +
Sbjct: 3 RRPIGVFDSGVGGLTVLKKLKELLPNEDYIYFGDTKRVPYGDKSKGEIEMYARQIINFMN 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K + VIACNT I + + + F + AA T++ + +++T T+
Sbjct: 63 EK-NTKIIVIACNTTCASID---KDEYKEILFSVLEAGAESAADITKNNKVGVIATTRTV 118
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + VE+ + DE K + +
Sbjct: 119 ESGSYEKSIRLKNGDVDVFQKACPGFVPLVEKGLS----ESDESFKLAKEYLKALNDEGI 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP++++ + + V +D + ++ L + H F+
Sbjct: 175 DTLVLGCTHYPILLNAIKNAAREDVLIVDPAVRLSHDVMNYLKENDMLNLTGGVTH-YFV 233
Query: 253 SGKPDIA 259
SG
Sbjct: 234 SGDAKKF 240
>gi|332830408|gb|EGK03036.1| glutamate racemase [Dysgonomonas gadei ATCC BAA-286]
Length = 275
Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 101/259 (38%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL +L +++ LMPEY + Y+ D+ PYG+ + + + D
Sbjct: 5 GPIGVFDSGYGGLTILSEIQSLMPEYDYCYLGDNSRAPYGSRSFDVVYEFTKQAVLSLFD 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRST-----FPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L ++ACNTA ++ P LG + P + TQS + IL
Sbjct: 65 -MGCNLVILACNTASAKALRTIQQKDLPHIDPDKRVLGVIRPTAEIIGPITQSRHVGILG 123
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ S I+ + + + VE + + IKK +
Sbjct: 124 TTGTIQSESYSIEINKLFPDIKVSGEACPMWVPLVENREYENEGADYFIKKNLSNILS-- 181
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245
+ + D ++L CTHYP++++ + P V + + IAR + L R
Sbjct: 182 KDPQIDTLILGCTHYPILLNKIKSFLPDGVTAIAQGEYIARSLQDYLHRHPEMDKVCTKG 241
Query: 246 DDHALFLSGKPDIAMRRLM 264
+ + P
Sbjct: 242 SVTKYYTTESPQKFSEAAT 260
>gi|212633112|ref|YP_002309637.1| glutamate racemase [Shewanella piezotolerans WP3]
gi|226722989|sp|B8CH57|MURI_SHEPW RecName: Full=Glutamate racemase
gi|212554596|gb|ACJ27050.1| Glutamate racemase [Shewanella piezotolerans WP3]
Length = 268
Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 8/263 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSGIGGL +L ++R +MP+ Y+ D+ PYG E+ L + L +
Sbjct: 1 MSGPILIFDSGIGGLSILDEIRKVMPQQSCCYLFDNARLPYGELEESELISGCVSLIIEQ 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACN+A TL+ LR S+ +G VPAIK AA ++ I +L+TP T
Sbjct: 61 AMRINAGIVVVACNSASTLVLTTLREQL-SIPVVGVVPAIKPAAKISKRRHIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI ++ C + L S L E G + +++E
Sbjct: 120 IKRPYTKQLIDAFAEDCRVELFGSSELVMLAEAKLAGTAVD----MQKLELLLAPIRTSE 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFDDH 248
D +VL CTH+P++ +Q + LD+ ++A R LL +T +V D
Sbjct: 176 LDTLVLGCTHFPVLATEIKQSLGQSIILLDSGKAVADRVLSLLKGNGLPKTASNKVVDYS 235
Query: 249 ALFLSGKPDIAMRRLMQGFGLKS 271
A+F + +++ + G S
Sbjct: 236 AVFTTDDIAQGLKKRLVEEGFTS 258
>gi|213691663|ref|YP_002322249.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|254766108|sp|B7GPZ1|MURI_BIFLI RecName: Full=Glutamate racemase
gi|213523124|gb|ACJ51871.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|320457754|dbj|BAJ68375.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 264
Score = 262 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 61/263 (23%), Positives = 103/263 (39%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG+ V +++ MP H +Y D PYG ++ + +
Sbjct: 4 SAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVERFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--------GLIS 124
+ VIACNTA + ++LR + + +G PA+K A +
Sbjct: 64 -RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TP TLR + L+ + SQ I L VE G D + + + G F
Sbjct: 122 VAATPLTLRERKFATLMDRFDSQNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + + D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPEG 238
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
+ P + L +
Sbjct: 239 ATGGVELANSDPSERIAELSRKL 261
>gi|90423117|ref|YP_531487.1| glutamate racemase [Rhodopseudomonas palustris BisB18]
gi|90105131|gb|ABD87168.1| glutamate racemase [Rhodopseudomonas palustris BisB18]
Length = 265
Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 103/258 (39%), Positives = 151/258 (58%), Gaps = 2/258 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+IL+FDSG+GGL VL+++ P+ ++YVADD FPYG + AL R++ L ++
Sbjct: 3 ASPTILVFDSGLGGLTVLREIVKARPDAGYVYVADDAFFPYGQHGEDALIARVVPLIGEL 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++P L VIACNTA TL+ LR+ + + F+G VPAIK A A +++ +S+L T T
Sbjct: 63 IAAHRPDLVVIACNTASTLVLSHLRAAYK-VPFVGTVPAIKPACAASRTKRVSVLGTSGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + C + LV S LA+ E G + + +I EI CF++ G R
Sbjct: 122 VKREYTRALIRDFAQACKVTLVGSAHLAALAEAALAGASVGDAQILAEIAPCFVDDGGAR 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL- 250
TD +VLACTH+PL++ L+PWPVDW+D + +IARR LL + L
Sbjct: 182 TDAVVLACTHFPLLLDRLVALAPWPVDWIDPAPAIARRVANLLGGGVGGAAGAPREARLI 241
Query: 251 FLSGKPDIAMRRLMQGFG 268
F SG+ A L+ FG
Sbjct: 242 FTSGRRHPASGALLPFFG 259
>gi|227888697|ref|ZP_04006502.1| glutamate racemase [Lactobacillus johnsonii ATCC 33200]
gi|227850724|gb|EEJ60810.1| glutamate racemase [Lactobacillus johnsonii ATCC 33200]
Length = 266
Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 99/265 (37%), Gaps = 15/265 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ +
Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ +L K + + CNTA + ++ P AA T++
Sbjct: 53 LTRDSVNFLLSK-DVKIIIFGCNTATAVAMSTIQKEIPLQIIGVVQSGALAAARTTETKN 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++++ T AT+ I + + + LA EE ED +
Sbjct: 112 VAVIGTKATVDSHSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----DPDEDTKNAVVSE 166
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQ 241
+ D +VL CTHYPL+ + +D +D +A+ +L R + +
Sbjct: 167 SLTPLKNADYDTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFAE 226
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQG 266
+ H + +G+ Q
Sbjct: 227 STALVKHDYYTTGEAKKFTEITRQW 251
>gi|326316343|ref|YP_004234015.1| glutamate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373179|gb|ADX45448.1| Glutamate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 288
Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 108/275 (39%), Gaps = 11/275 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
Q I +FDSG+GGL VL+ +R +P F+Y+AD PYG D + R +
Sbjct: 1 MPSATQRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGHAPYGERGDAYVAARTHAI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + + V+ACNTA E+R+ + +G PA+K A A T++G + ++
Sbjct: 61 TTYLQQTHGIKALVVACNTATAAAIHEVRARHAGLPLVGVEPALKPALALTRTGRVGVIG 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCF 184
T TL L S + LA +E + EI+
Sbjct: 121 TRGTLASAKFQRLQASLQGAVEFVVQPCDGLAHAIERSTADTQPDAPATAEIRALCARYT 180
Query: 185 IEK-----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
D +VL CTHY + R + V ++ + +AR+ R LL T
Sbjct: 181 AALGPFGTAPGEIDTLVLGCTHYIFAENALRAHTGPHVRLVETGEPVARQTRRLLEAAGT 240
Query: 240 HQT---RVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
T +LF +G + + L +
Sbjct: 241 LATAHGPAAGTASLFTTGALPLLQAAAHRWLQLPA 275
>gi|295425843|ref|ZP_06818523.1| glutamate racemase [Lactobacillus amylolyticus DSM 11664]
gi|295064446|gb|EFG55374.1| glutamate racemase [Lactobacillus amylolyticus DSM 11664]
Length = 267
Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 17/261 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG GG V++K+ +PE I++ D+ PYG+ + +
Sbjct: 1 MDNRP--------IGLLDSGDGGFSVVKKVIKKLPEESTIFIGDNAHMPYGDKSKEEVIE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ +L + L + ACNTA ++ +G + A T++
Sbjct: 53 LTRHSVNFLLSR-DVKLIIFACNTATAAAMSTIQKEIK-PQIIGVIQSGSLAAVRTTENK 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TP T+ N I + + +++ LA VE + + + ++
Sbjct: 111 KVAVSATPVTIASHAYKNEIQVRDPEIEVTELATPKLAPLVEA-----EEDYNTNLRVVK 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-H 240
+GK D VL CTHYPLI F + P V +D +D +A+ ++ R
Sbjct: 166 ESLKPLQGKDFDTFVLGCTHYPLIQKEFEEALPDNVSIVDPADQVAQYTFNVMRRDGLFA 225
Query: 241 QTRVFDDHALFLSGKPDIAMR 261
H + +G + R
Sbjct: 226 APGSVARHEYYTTGDVEKFER 246
>gi|110835225|ref|YP_694084.1| glutamate racemase [Alcanivorax borkumensis SK2]
gi|110648336|emb|CAL17812.1| glutamate racemase [Alcanivorax borkumensis SK2]
Length = 263
Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 7/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSGIGGL + +++R L+P + +YVAD V PYG +H +++R + ++D
Sbjct: 5 GPIGVFDSGIGGLSIARRIRELLPHENLLYVADSVHAPYGEKAEHYIQQRADTITRFLID 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
V+ACNTA +LR+ + ++ +G P IK AA ++SG+I +L+T TL+
Sbjct: 65 -NNAKAIVVACNTATVSAIRQLRADY-TLPIIGVEPGIKPAALKSKSGVIGVLATSQTLK 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+NL + + + L ++E + + ++ + + K D
Sbjct: 123 SESFNNLSRLFSESVCVEIQPCPGLVEQIE----VLDLDSEKTQALVARYVAPLIEKGAD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFL 252
IVL CTHY + V R+++ + ++ ++AR L N T V A +
Sbjct: 179 HIVLGCTHYAFLAPVIRRIAGAGIQVVNTDIAVARETLRRLQNANRLSTSVAPGQMAFWS 238
Query: 253 SGKPDIAMRRLMQGF 267
S ++A +++ + +
Sbjct: 239 SAANELADQQIKRLW 253
>gi|186476698|ref|YP_001858168.1| glutamate racemase [Burkholderia phymatum STM815]
gi|184193157|gb|ACC71122.1| glutamate racemase [Burkholderia phymatum STM815]
Length = 303
Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 8/247 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + IFDSG+GGL VL+ +R +P +YVAD + PYG +D + R + +
Sbjct: 27 DPRAPVGIFDSGLGGLSVLRAVRSQLPSEAIVYVADSLYAPYGERDDDFIADRTLAIGEW 86
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + L V+ACNTA +R P + +G P +K AA ++S + +L+T
Sbjct: 87 LIAQGAKAL-VVACNTATAQSIALVREKLP-IQLIGVEPGVKPAAQQSKSRVAGVLATRV 144
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR L+ Y S C L VE I+ E++ +
Sbjct: 145 TLRSARFQGLLERYASDCRFLCQPGHGLVEAVER----CDIESAELRALLVSYVQPMLDA 200
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDH 248
D +VL CTHYP + R ++ + +D S +IAR+ +L +
Sbjct: 201 GADTLVLGCTHYPFLDAAIRDIAGDRLTLIDTSVAIARQLERVLDQQGLRSPERDTVPPP 260
Query: 249 ALFLSGK 255
+
Sbjct: 261 RFCSTSD 267
>gi|119944401|ref|YP_942081.1| glutamate racemase [Psychromonas ingrahamii 37]
gi|119863005|gb|ABM02482.1| glutamate racemase [Psychromonas ingrahamii 37]
Length = 268
Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V ++R P Y+ D+ FPYG + L +RLM L S L ++
Sbjct: 6 VLIFDSGVGGLSVFDQVRKQSPGIKCFYLFDNAYFPYGELQADFLIQRLMSLLSSFLGRH 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACN+A T+ LR +F S+ +G VPAIK A T++G+I +L+TPAT+
Sbjct: 66 KIDLIVIACNSASTVALQYLRESF-SIPIVGVVPAIKPATFLTKNGVIGLLATPATINGA 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT+ LI + + + + S L E G I++ +I+ + D I
Sbjct: 125 YTARLIDEFAADKQVLKIGSTQLVKLAELKLQGKLIQQADIEGVLAAWL--MLDTMPDTI 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS-- 253
VL CTH+PL+ + ++ +D+ ++IA+R LL T + H + +
Sbjct: 183 VLGCTHFPLLKAEIFRCFKDKINLVDSGNAIAQRVTQLLGESEM--TAKENTHQAYFTKV 240
Query: 254 -----GKPDIAMRRLMQGFGLKS 271
A++R +G S
Sbjct: 241 YQLDESTNFSALQRSFLAYGFNS 263
>gi|86750804|ref|YP_487300.1| glutamate racemase [Rhodopseudomonas palustris HaA2]
gi|86573832|gb|ABD08389.1| glutamate racemase [Rhodopseudomonas palustris HaA2]
Length = 264
Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 97/245 (39%), Positives = 148/245 (60%), Gaps = 4/245 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+IL+FDSG+GGL VL+++ L P+ ++YV DD FPYG + A+ R++ L +++
Sbjct: 4 HPNILVFDSGLGGLTVLREVVKLRPDARYVYVGDDAFFPYGQKSEEAVIGRVVPLIGELI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ P L VIACNTA T+ LR+ + ++ F+G VPAIK A A +++ +S+L T T+
Sbjct: 64 AEHAPDLVVIACNTASTMTLAPLRARY-AVPFVGTVPAIKPACAASRTKRVSVLGTSGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR- 191
R YT LI + C ++LV S+ LA+ E G + ++ I+ EI CF+ +G
Sbjct: 123 RLEYTRALIRDFAGGCDVNLVGSVHLAALAEAALGGADVPDEAIRAEIAPCFVAGDGADD 182
Query: 192 -TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
TD IVLACTHYPL++ +L+PWPVDW+D + +IARR LL + +
Sbjct: 183 RTDSIVLACTHYPLLLDRLVRLAPWPVDWIDPAPAIARRVATLLG-AGSGHGDAPGVRMV 241
Query: 251 FLSGK 255
F SG+
Sbjct: 242 FTSGR 246
>gi|254251913|ref|ZP_04945231.1| Glutamate racemase [Burkholderia dolosa AUO158]
gi|124894522|gb|EAY68402.1| Glutamate racemase [Burkholderia dolosa AUO158]
Length = 285
Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 10/244 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P FIYVAD PYG +D + +R + + ++ +
Sbjct: 15 PIGIFDSGLGGLSVLRAVRAHLPGESFIYVADARYVPYGERDDAFITERTIAIGEWLVGQ 74
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNTA R ++ +G P IK A + SG+ +L+T +TLR
Sbjct: 75 RAKAL-VIACNTATAQSIAAARERL-AIPVVGVEPGIKPAVQQSASGVAGVLATQSTLRS 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + + C L +E G ++ + + D
Sbjct: 133 ARFQALLERHGAGCRFICQPGHGLVQAIERGDTG----SPALRALLADYLHRMLDEGADT 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHALF 251
+VL CTHYP ++ R + + +D SD+IAR+ +L + + TR
Sbjct: 189 VVLGCTHYPFLIATIRDIVGDRLSIVDTSDAIARQLVRVLDQHDLRAPDDTRAAPP-RFC 247
Query: 252 LSGK 255
+G+
Sbjct: 248 STGE 251
>gi|81428019|ref|YP_395018.1| glutamate racemase [Lactobacillus sakei subsp. sakei 23K]
gi|123564670|sp|Q38YM1|MURI_LACSS RecName: Full=Glutamate racemase
gi|78609660|emb|CAI54706.1| Glutamate racemase [Lactobacillus sakei subsp. sakei 23K]
Length = 274
Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 97/256 (37%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL ++++ R +P +++ D PYG +++ + + L
Sbjct: 3 KQPIGFMDSGVGGLTLVKEARKRLPNEDMVFIGDQARLPYGEKPAATVREFAWQMAN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ VIACNTA +L++ ++ +G + P A T + + +++T T
Sbjct: 62 RHQEIKALVIACNTATAAALPDLQAQL-AIPVIGVIKPGSIAALQTTHNRRVGVIATTGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ S + + + +++ + +E ++ + +
Sbjct: 121 IQSAAYSQQMAALNPDVQVTGLAAPQFVTMIEANQR----HGQAVQTIVNQILQPLQKSE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PL+ + V ++ + +L + T ++
Sbjct: 177 IDTLVLGCTHFPLLTTAIQTAVGPDVTLVNPAVQAITMLEEVLTQQQQLATTTPGTLRMY 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G Q
Sbjct: 237 TTGSVAAFEEIAQQWL 252
>gi|268318989|ref|YP_003292645.1| hypothetical protein FI9785_498 [Lactobacillus johnsonii FI9785]
gi|262397364|emb|CAX66378.1| murI [Lactobacillus johnsonii FI9785]
Length = 266
Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 100/266 (37%), Gaps = 17/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL VL+K+ MP I++ D PYG+ +
Sbjct: 1 MDNRP--------IGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIIS 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ +L K + + CNTA ++ P + +G + AA T++
Sbjct: 53 LTRDSVNFLLSK-DVKIIIFGCNTATAAAMSTIQKEIP-LQIIGVIQSGALAAARTTETK 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++++ T AT+ I + + + LA EE ED +
Sbjct: 111 NVAVIGTKATVDSHSYLKEIQYRDPEIKVSEFAQPKLAPLAEE-----DPDEDIKNAVVS 165
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ + +D +D +A+ +L R +
Sbjct: 166 ESLTPLKNADYDTLVLGCTHYPLLREEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFA 225
Query: 242 TRVFD-DHALFLSGKPDIAMRRLMQG 266
H + +G+ Q
Sbjct: 226 ESTAPVKHDYYTTGEAKKFTEITRQW 251
>gi|169350167|ref|ZP_02867105.1| hypothetical protein CLOSPI_00911 [Clostridium spiroforme DSM 1552]
gi|169292950|gb|EDS75083.1| hypothetical protein CLOSPI_00911 [Clostridium spiroforme DSM 1552]
Length = 261
Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats.
Identities = 58/249 (23%), Positives = 113/249 (45%), Gaps = 8/249 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I +FDSG+GGL VL ++ L+P + IY+ D+ PYG+ L K +
Sbjct: 1 MERAIGVFDSGVGGLTVLNSIKSLLPNENIIYIGDNYHCPYGDKTPAQLFKYASGIVEYF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ K L V+ACNT + + + L+ T+P + +G + A + I++T AT
Sbjct: 61 I-KQNVKLIVLACNTTSSTVLERLQMTYPEVMIIGVIDATVNDFINRKVANTLIIATVAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I S+ +++ L VE ++ I + E + R
Sbjct: 120 IKSNKYPETIKQIDSKIETFSLATPKLVPLVESGKY-----KEGIYDILHEYLDEYKE-R 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
I+L CTHYP++ + P ++++ +S++I++ + +L R ++
Sbjct: 174 IQSIILGCTHYPILKEQIENVLP-NIEYVSSSEAISKSVKDILLRKKLLNFNKCSYTKIY 232
Query: 252 LSGKPDIAM 260
+G D +
Sbjct: 233 TTGDVDEFI 241
>gi|71280369|ref|YP_268000.1| glutamate racemase [Colwellia psychrerythraea 34H]
gi|71146109|gb|AAZ26582.1| glutamate racemase [Colwellia psychrerythraea 34H]
Length = 256
Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 7/251 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL + + + +P + IY+AD + PYG + KR+ ++ ++DK
Sbjct: 1 MFDSGVGGLSIAKCITEQLPHENIIYIADSLHAPYGEKSVEFIIKRVNYIAKQLIDKG-V 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
VIACNTA ++LRS S+ +G PAIK AA + S ++IL+T AT
Sbjct: 60 KAIVIACNTATVNAIEQLRSQV-SIPIIGVEPAIKPAAKQSISKKVAILATQATSENQRF 118
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+LI + + +H+ L +E+ +K+ I E D +VL
Sbjct: 119 KDLIDLHHNGAEVHIQPCPGLVEFIEQGNQNSDDCNALLKQYINPLIKE----GIDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALFLSGKP 256
CTHYP + ++ V ++ + + + L + + F S +
Sbjct: 175 GCTHYPFVQKQISLIAGQQVTIIETAAPVTVQLSKKLVEREISACKTQQGQYQFFSSLET 234
Query: 257 DIAMRRLMQGF 267
+ Q +
Sbjct: 235 KQQEQIFSQLW 245
>gi|323498757|ref|ZP_08103744.1| glutamate racemase [Vibrio sinaloensis DSM 21326]
gi|323316185|gb|EGA69209.1| glutamate racemase [Vibrio sinaloensis DSM 21326]
Length = 262
Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats.
Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 12/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q ++LIFDSG+GGL V +++ ++P+ ++ Y+ D+ +PYG E L R+ L ++
Sbjct: 4 QANVLIFDSGVGGLSVYEEIARILPQLNYTYIFDNEAYPYGELEHDTLIHRVDALIGSLV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + L VIACNTA T++ LR P + +G VPAIK A+ + + +++TPAT+
Sbjct: 64 KEQEIDLVVIACNTASTIVLPTLRQRLP-IPIVGVVPAIKPASNM-ANIAVGLIATPATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT +LI S+ + L+ S L EE G + E+ + +
Sbjct: 122 TRQYTHDLIRSFSQSKPVELLGSTRLVDMAEEKLRGKALDLQELSQILAP-----ISGHI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI +Q+ V +D+ +IARR + LL + +F
Sbjct: 177 DVAVLGCTHFPLIKQEIQQVLGSSVLLVDSGKAIARRVQALL---GIEKQEWLGRREIFS 233
Query: 253 SGKP--DIAMRRLMQGFGLKS 271
+ P + A+ R + S
Sbjct: 234 TAPPWEEGALNRALTHLEFSS 254
>gi|226357251|ref|YP_002786991.1| glutamate racemase [Deinococcus deserti VCD115]
gi|226319241|gb|ACO47237.1| putative glutamate racemase [Deinococcus deserti VCD115]
Length = 283
Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats.
Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 9/249 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL VL ++R MP ++Y+AD P G D ++ S +
Sbjct: 5 APVGVFDSGVGGLSVLAELRRAMPHEEYLYLADTAHVPIGARSDEEIRDLTDRAVSALHA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA LR+ F ++ +G VPA+K A T+SG++ +L+TP TLR
Sbjct: 65 RGVKG-VVVACNTASAFSLSHLRARF-AIPIIGLVPAVKPAVEATRSGVVGVLATPGTLR 122
Query: 134 RTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
T +++I + + + S L VE E + +
Sbjct: 123 GTLLADVIRQFADPAGVKVLQAVSRELVPLVEAGQA----DSSETQAVLREVLSPLVQAG 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D +VL CTHYP + +D+ ++AR R +L N R
Sbjct: 179 ADQLVLGCTHYPFLAGSIHAEFGNCFTLVDSGAAVARHTRRVLAAENLLTARTETGKVTY 238
Query: 251 FLSGKPDIA 259
++G D A
Sbjct: 239 LVTGDVDAA 247
>gi|153937979|ref|YP_001392916.1| glutamate racemase [Clostridium botulinum F str. Langeland]
gi|166231035|sp|A7GJF6|MURI_CLOBL RecName: Full=Glutamate racemase
gi|152933875|gb|ABS39373.1| glutamate racemase [Clostridium botulinum F str. Langeland]
gi|295320892|gb|ADG01270.1| glutamate racemase [Clostridium botulinum F str. 230613]
Length = 257
Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L
Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 64 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELNKGGKIIIMATPMTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
IVL CTHYP I ++++ +D S +R + L N +
Sbjct: 179 SSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREE 229
>gi|163781564|ref|ZP_02176564.1| glutamate racemase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882784|gb|EDP76288.1| glutamate racemase [Hydrogenivirga sp. 128-5-R1-1]
Length = 255
Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 11/231 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL+ +R P Y+ D PYG + + + ++ L +
Sbjct: 3 VGVFDSGVGGLTVLKAIREKFPRIDLFYLGDTARVPYGTKSPDTVIRYSVE-CAEFLSEK 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA + + L S ++ LG V P +++A + T+ G + ++ T AT+R
Sbjct: 62 SVDVLVVACNTASSYALETLTSML-TIPVLGVVEPGVRKALSLTK-GRVGVIGTSATIRS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + + + VEE I E + +E E K D
Sbjct: 120 EAYQHRLRE--AGVEVFSKACPLFVPLVEEGLVEGDITE----RVVEFYLKEFREKGIDT 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
++L CTHYPL+ + + + +D+SD++A L+ +F
Sbjct: 174 LILGCTHYPLLKNTIKNFL-KGTEVVDSSDAVAEELSSLVEDEGQGAIELF 223
>gi|303229117|ref|ZP_07315918.1| glutamate racemase [Veillonella atypica ACS-134-V-Col7a]
gi|302516130|gb|EFL58071.1| glutamate racemase [Veillonella atypica ACS-134-V-Col7a]
Length = 269
Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 7/254 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ ++ P +FIY+ D+ P GN + + + + L +
Sbjct: 10 PIGVFDSGVGGLSVLKVLQEQFPNENFIYIGDNANNPVGNRPTEEITEIACRIA-ETLHQ 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNT + DE+RS ++ +G +K A + S I I++T AT+
Sbjct: 69 VPVKLMVIACNTFTVVALDEVRSRV-NVPVIGVSQGVKTAIRESNSNTIGIMATVATVNS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + LA +E+ + +D ++K + + DV
Sbjct: 128 HIHKYVAMDIDHEVFVWEQPCPELAGLIEQG----HLHDDAVRKAAKEYLAPMLERDIDV 183
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLS 253
+VL CTH+P + V ++LS + ++D + + R + + H L+ +
Sbjct: 184 VVLGCTHFPFVSPVLQELSGDRIRYIDPAYETSDLVRRTMDSNHLHNPSTEKGRSTLYFT 243
Query: 254 GKPDIAMRRLMQGF 267
+ Q
Sbjct: 244 KDIALGADLGAQFL 257
>gi|296454516|ref|YP_003661659.1| glutamate racemase [Bifidobacterium longum subsp. longum JDM301]
gi|296183947|gb|ADH00829.1| glutamate racemase [Bifidobacterium longum subsp. longum JDM301]
Length = 264
Score = 261 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 102/263 (38%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG+ V +++ MP H +Y D PYG ++ + +
Sbjct: 4 SAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGVKTPEQVRALSFDIVERFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--------GLIS 124
+ VIACNTA + ++LR + + +G PA+K A +
Sbjct: 64 -RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TP TLR + L+ + S I L VE G D + + + G F
Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + + D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPED 238
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
+ + RL +
Sbjct: 239 ATGGVELANSDLSERVTRLSRDL 261
>gi|327399664|ref|YP_004340533.1| glutamate racemase [Hippea maritima DSM 10411]
gi|327182293|gb|AEA34474.1| Glutamate racemase [Hippea maritima DSM 10411]
Length = 254
Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 102/256 (39%), Gaps = 23/256 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V++++ IY+ D PYG + K + + L ++
Sbjct: 7 IGVFDSGVGGLSVVKQLLKAF-NSDIIYLGDTARLPYGTKSKETVLKYSIQNA-EFLMRF 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ D L+ F F PA K AA + + + ++ T +T++
Sbjct: 65 NVDAIVVACNTASSVAIDVLKKKFNLPVFGVIEPAAKLAAKFEK---VCVIGTTSTIQSN 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I Y C + + + VEE I + K+ + D +
Sbjct: 122 AYPKKIAKYNKGCRVTQRACPLFVPLVEEGWIYDDITYEVAKRYLYDL-------ECDAL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA---RCLLPRINTHQTRVFDDHALFL 252
+L CTHYPL+ + +++ V +D+ +++ + + L +
Sbjct: 175 ILGCTHYPLLREIIQRVMGVGVSLIDSGEALVKGLKDFKDLFEGSGRLN--------CYT 226
Query: 253 SGKPDIAMRRLMQGFG 268
+ + + G
Sbjct: 227 TDSEEKFAKLGSMFLG 242
>gi|312884421|ref|ZP_07744126.1| glutamate racemase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367943|gb|EFP95490.1| glutamate racemase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 274
Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats.
Identities = 84/259 (32%), Positives = 126/259 (48%), Gaps = 11/259 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q ILIFDSG+GGL V +++ +P ++ Y+ D+ +PYG E L R+ L +
Sbjct: 15 QTKILIFDSGVGGLSVFKEIEAKLPALNYFYIFDNAAYPYGELEHETLTARVETLVCQYV 74
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K L VIACNTA T++ LR+ S+ +G VPAIK A+ + I +++TPAT+
Sbjct: 75 KKLDIDLVVIACNTASTIVLPMLRARL-SIPVVGVVPAIKPASNL-ANKAIGLIATPATI 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI+ + I ++ S L EE G I KE+E +
Sbjct: 133 TRQYTRELINDFSQSKPIKMIGSTRLVDMAEEKLRGAAID----LKELEHILGPMKN-NI 187
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI + + + V +D+ +IARR LL T ++
Sbjct: 188 DVAVLGCTHFPLIKNEIQSVLGSEVLLIDSGVAIARRVESLLT--PTAGAGEQGQREIYS 245
Query: 253 SGKP--DIAMRRLMQGFGL 269
+ P + A+ + F
Sbjct: 246 TAPPWKEKALNVALTSFKF 264
>gi|315925652|ref|ZP_07921862.1| glutamate racemase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315621193|gb|EFV01164.1| glutamate racemase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 258
Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 105/260 (40%), Gaps = 7/260 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K + I +FDSG+GG+ VL+ + +P +F++ D PYG ++ +
Sbjct: 1 MRKAFNDYIGVFDSGVGGISVLKHLTEQLPNENFLFYGDSANAPYGEKSVEQVRALAFDI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+++ VIACNTA + ELR F + +G PA+K AA + + +++
Sbjct: 61 VRRMVE-DGVKAIVIACNTATSAAAKELRCAF-ELPIIGVEPALKPAATASGRHRVLVMA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TL +L Y S LA R+E I+K I GC+
Sbjct: 119 TPVTLSLQKYRDLWDRYAGYAECVSCSCPGLAKRIERGRLDAPDLTALIEKLI-GCY--- 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
R D +VL CTHYP + R + V D A + +L +
Sbjct: 175 -RGRVDSVVLGCTHYPFVSDQIRGVLGSHVTLYDGGAGTAGELKNVLTQKQLLTRAATPG 233
Query: 248 HALFLSGKPDIAMRRLMQGF 267
LF S + L + F
Sbjct: 234 GVLFQSSLKQPSEITLYRHF 253
>gi|167752024|ref|ZP_02424151.1| hypothetical protein ALIPUT_00266 [Alistipes putredinis DSM 17216]
gi|167660265|gb|EDS04395.1| hypothetical protein ALIPUT_00266 [Alistipes putredinis DSM 17216]
Length = 255
Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 15/268 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P + ++DSG+GGL V +++R +PE +Y+ D PYG + +
Sbjct: 1 MDNRP--------VGVYDSGLGGLTVWREIRRQLPEESLVYLGDGKNCPYGARPADEICR 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
++ + V+ACNTA D LR + M +G PA+K A T+SG+
Sbjct: 53 LADEAVGRLVGAG-CKMVVVACNTATAAAIDFLRRKYRQMPIVGMEPAVKPACLNTRSGV 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T +L Y + VEE + +++ +E
Sbjct: 112 VGVLATARSLDGDLFRRTAARYGENIRVLTAVGEGFVELVEEDREQSPEAVETVRRVLE- 170
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQ 241
+ D IVL CTHYP ++ VFRQ+ V +D S ++ RR LL + +
Sbjct: 171 ---PMIREGADQIVLGCTHYPFLLPVFRQVIGERGVAVVDPSPAVGRRVGQLLDQYDLRA 227
Query: 242 TRVFDDHALFLSGKPDIAMRRLM-QGFG 268
+ + FL+ + RL + FG
Sbjct: 228 EKGATANYGFLTFADEAYRSRLECKAFG 255
>gi|168181031|ref|ZP_02615695.1| glutamate racemase [Clostridium botulinum NCTC 2916]
gi|182668118|gb|EDT80097.1| glutamate racemase [Clostridium botulinum NCTC 2916]
Length = 257
Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L
Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 64 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDIIYNYLKDKFSKYDNEKI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
IVL CTHYP I ++++ +D S +R + L N +
Sbjct: 179 SSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREE 229
>gi|322807887|emb|CBZ05462.1| glutamate racemase [Clostridium botulinum H04402 065]
Length = 257
Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L
Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 64 MSKGVKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
IVL CTHYP I ++++ +D S +R + L N +
Sbjct: 179 SSIVLGCTHYPFIEETLKEITHNKACIIDGSFGTSRELKRQLKNSNMLREE 229
>gi|323525504|ref|YP_004227657.1| glutamate racemase [Burkholderia sp. CCGE1001]
gi|323382506|gb|ADX54597.1| glutamate racemase [Burkholderia sp. CCGE1001]
Length = 295
Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 9/246 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+ +R P+ +YVAD + PYG +D + R + + ++
Sbjct: 20 RAPVGIFDSGLGGLSVLRAVRAQSPDEALLYVADSLYAPYGERDDDFIADRTLAIGEWLV 79
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA +R P + +G P +K AA ++++ + +L+T TL
Sbjct: 80 KQGAKAL-VVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALHSRTRVAGVLATQVTL 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE + E++ +
Sbjct: 138 RSARFQALLARYAADCRFICQPGHGLVQAVER----CDVGSAELRALLASYLQPMLEAGA 193
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDHA 249
D +VL CTHYP + R + + +D S +IAR+ +L + Q
Sbjct: 194 DTLVLGCTHYPFLDAAIRDIVGDRMALVDTSVAIARQLERVLEQHGMRAALQAASAPLPR 253
Query: 250 LFLSGK 255
+ +
Sbjct: 254 FYSTDD 259
>gi|220920402|ref|YP_002495703.1| glutamate racemase [Methylobacterium nodulans ORS 2060]
gi|219945008|gb|ACL55400.1| glutamate racemase [Methylobacterium nodulans ORS 2060]
Length = 312
Score = 261 bits (668), Expect = 9e-68, Method: Composition-based stats.
Identities = 106/260 (40%), Positives = 153/260 (58%), Gaps = 6/260 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
++L+FDSG+GGL VL ++R P+ +Y ADD FPYG+ + AL R++ + ++
Sbjct: 42 PAVLVFDSGLGGLTVLAEVRRARPDARVVYAADDAAFPYGDLSEPALVARVVAVMERLIA 101
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L V+ACNTA TL+ LR+ F ++ F+G VPAIK AAA T+SGLIS+L+TP T+R
Sbjct: 102 LHAPDLVVVACNTATTLVLPALRARF-AIPFVGTVPAIKPAAAATRSGLISVLATPGTVR 160
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI +Y + LV + LA+ E G + +D +++EI CF+ RTD
Sbjct: 161 RDYTRELIDAYAGAYAVTLVGATRLAAFAEAELAGTPVGDDLLREEIAPCFVGAGESRTD 220
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHALF 251
V+VL CTHYPL++ F +L PWPV W+D + +IARR LL A+F
Sbjct: 221 VVVLGCTHYPLLLRRFERLVPWPVTWIDPAPAIARRMAQLLGPAPHPAPPEDAAPVAAVF 280
Query: 252 LSGK---PDIAMRRLMQGFG 268
G+ P + +G G
Sbjct: 281 TGGERITPSLRDALAARGMG 300
>gi|116490738|ref|YP_810282.1| glutamate racemase [Oenococcus oeni PSU-1]
gi|290890158|ref|ZP_06553240.1| hypothetical protein AWRIB429_0630 [Oenococcus oeni AWRIB429]
gi|122277078|sp|Q04G05|MURI_OENOB RecName: Full=Glutamate racemase
gi|116091463|gb|ABJ56617.1| glutamate racemase [Oenococcus oeni PSU-1]
gi|290480202|gb|EFD88844.1| hypothetical protein AWRIB429_0630 [Oenococcus oeni AWRIB429]
Length = 281
Score = 261 bits (668), Expect = 9e-68, Method: Composition-based stats.
Identities = 55/271 (20%), Positives = 113/271 (41%), Gaps = 15/271 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN I DSG+GGL V+++ +P +V D+ PYG ++K
Sbjct: 1 MDNR--------GIGYIDSGLGGLTVVREALKQLPNESVYFVGDEARMPYGPRPTVEIQK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA-AAYTQSG 121
+ + ++ K+ V+ACNTA +LR+ + + +G + A A T++
Sbjct: 53 FTLQMADFLVKKHNIKALVVACNTATAQALPQLRA-YLEIPVIGVISAGALAGINATRNL 111
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++++ T +T+ + + + S I + VE G + + + I
Sbjct: 112 HVNVIGTQSTVESKAYYDQLIALNSDLVIEQKALPEFVQLVESDMAGTPKGKQIVYQAIH 171
Query: 182 GCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT- 239
EK +GK++D +VL CTH+P++ + V +D + + ++ + N
Sbjct: 172 NWMEEKNDGKKSDTLVLGCTHFPILKKEIQAAVDKNVAVVDPASEEILQTAEIMRKNNAF 231
Query: 240 HQTRVFDDHA---LFLSGKPDIAMRRLMQGF 267
H ++ + H + +G + +
Sbjct: 232 HDSKNINHHEKDVFYTTGNIGRFSKFTREWL 262
>gi|90021260|ref|YP_527087.1| glutamate racemase [Saccharophagus degradans 2-40]
gi|89950860|gb|ABD80875.1| glutamate racemase [Saccharophagus degradans 2-40]
Length = 272
Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 134/240 (55%), Gaps = 2/240 (0%)
Query: 3 IDNYPCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ P + +L+FDSG GGL + K+ L + +Y AD+ FPYG AL+
Sbjct: 1 MTESPRQPDPNTPTVLVFDSGAGGLSICTKIMALRNDCAIVYAADNAYFPYGELSTSALR 60
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+R++ +++D+Y P ++VIACNTA T + +LR TF + F+G VPAIK AA TQ+G
Sbjct: 61 QRVITFMGELIDQYSPSIAVIACNTASTALLADLRETF-DIPFVGVVPAIKPAATATQTG 119
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I+IL+T AT+ R YT +LI+ + + L S+ L S E+ + I+ +
Sbjct: 120 TIAILATSATVTRDYTRDLINEFAPNKTVILHSAQPLVSAAEQLIQNNQCPNSAIQGALS 179
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
F + + D IVLACTH+PL+ + L P + LD+ D+IARR LL NT +
Sbjct: 180 ELFAKPGAEHIDTIVLACTHFPLLREAIQALLPASITLLDSGDAIARRVDSLLCATNTLK 239
>gi|325955658|ref|YP_004239318.1| glutamate racemase [Weeksella virosa DSM 16922]
gi|323438276|gb|ADX68740.1| Glutamate racemase [Weeksella virosa DSM 16922]
Length = 269
Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 14/269 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M DN P I +FDSG+GGL ++++ L+P+ +Y D PYG A+
Sbjct: 1 MIYDNRP--------IGVFDSGVGGLNFAKEIKRLLPKESIVYFGDTKHLPYGEKSAEAI 52
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQ 119
KK + ++ + + V ACNTA + ++ + + + + + AY
Sbjct: 53 KKYSKEITQFLISQNCKAILV-ACNTATANAIEIIKEVAGEEILVVDVINPVAEKVAYEL 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
I +++T AT+ I + + V++ +L +EE + +
Sbjct: 112 RTKIGVIATKATVNSCAYKKTIRKFNKHIKVVEVATPLLVPIIEEGLYNTNVS----RAV 167
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+E K+ + D I+L CTHYPLI Q+ V +++ + L +
Sbjct: 168 LEVYLSNKKLEGIDSIILGCTHYPLIQKEIEQIFEGKVQVINSPLIVVNCLIYQLHQRQQ 227
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ +LS D + + FG
Sbjct: 228 LANNNNPYYLFYLSDYTDNFHKISKRFFG 256
>gi|291516158|emb|CBK69774.1| glutamate racemase [Bifidobacterium longum subsp. longum F8]
Length = 264
Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 102/263 (38%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG+ V +++ MP H +Y D PYG ++ + +
Sbjct: 4 SAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSASAPYGIKTPEQVRALSFDIVERFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--------GLIS 124
+ VIACNTA + ++LR + + +G PA+K A +
Sbjct: 64 -RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TP TLR + L+ + S I L VE G D + + + G F
Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + + D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPED 238
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
+ P + L +
Sbjct: 239 ATGGVELANSDPSERIAELSRKL 261
>gi|170758321|ref|YP_001788902.1| glutamate racemase [Clostridium botulinum A3 str. Loch Maree]
gi|229486237|sp|B1KTG4|MURI_CLOBM RecName: Full=Glutamate racemase
gi|169405310|gb|ACA53721.1| glutamate racemase [Clostridium botulinum A3 str. Loch Maree]
Length = 257
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L
Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKT-LTFNATDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 64 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
IVL CTHYP I ++++ +D S +R + L N +
Sbjct: 179 SSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREE 229
>gi|284049086|ref|YP_003399425.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
gi|283953307|gb|ADB48110.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
Length = 279
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 97/255 (38%), Gaps = 6/255 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + I + DSG+GGL VL+ ++ +P FI++ D PYGN + + + +D
Sbjct: 3 QAKQPIGVIDSGVGGLTVLKWLQAKLPHEDFIFIGDTARTPYGNRSREEITRFVAE-MTD 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
LDK V+ACNT L D ++ P +G + T++ + +T
Sbjct: 62 WLDKRHIKQLVVACNTITVLGLDVIKGNHP-FDVIGMAKGSRMVPGVTKNNRVGFFATDF 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ I + + +E G K E+K I +
Sbjct: 121 TVSTGAHKREIQRICPEIQVFGQGCPKFVPLIE----GEKFGSPELKAAIHEYADKLREH 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L+CTHYP + + V LD ++ + A L + +T +
Sbjct: 177 NVDTVLLSCTHYPFVRKEIEEEFGPEVTILDPAERTTQDALENLEKRGLARTTGLGRAEI 236
Query: 251 FLSGKPDIAMRRLMQ 265
+ + R +
Sbjct: 237 CFTADLERGRRLAAR 251
>gi|332159762|ref|YP_004296339.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|318603894|emb|CBY25392.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica Y11]
gi|325663992|gb|ADZ40636.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 240
Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 123/237 (51%), Gaps = 4/237 (1%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MP+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L
Sbjct: 1 MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 60
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S
Sbjct: 61 RERF-TFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTQDLIERFATDCKIELLGS 119
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + ++ +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 120 SELVELAETKLHGGVVPKEALKKILHPWLAMREP--PDTIVLGCTHFPLLTEELAQVLPE 177
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+D+ +IARR L+ + ++ A ++ D A+ ++QG+G S
Sbjct: 178 GTRMVDSGAAIARRTAWLISSQENMISSDEENIAYCMALNADTDALLPVLQGYGFPS 234
>gi|94268729|ref|ZP_01291267.1| Glutamate racemase [delta proteobacterium MLMS-1]
gi|93451485|gb|EAT02316.1| Glutamate racemase [delta proteobacterium MLMS-1]
Length = 264
Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 9/257 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ V + + +P++ IY D PYG+ + D L +
Sbjct: 2 IGIFDSGVGGMTVARAIEQALPDHRLIYFGDLARTPYGSKSAETITAYSRQNV-DFLRQQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACN+A ++ LR+++ F PA+++A Y+ G + ++ T AT+R
Sbjct: 61 GAKLLVVACNSAASVATAALRASYELPLFEVISPAVREAVHYSSGGRVGVIGTRATIRSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ C + + +L VEE + + E K + + + D +
Sbjct: 121 VYEELLQRQRPACRVFAAACPLLVPLVEEGW----LDKRETKMILRRYLAPLKRHQVDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFDDHALF 251
VL CTHYPL+ + ++ V +D+S ++A + L + Q R ++ +
Sbjct: 177 VLGCTHYPLLKEMIQRRIGRRVRVIDSSAALAGELQRFLAAHPEIEQSLQRRREGENLYY 236
Query: 252 LSGKPDIAMRRLMQGFG 268
+S + A + FG
Sbjct: 237 VSDVTEAATATAHRIFG 253
>gi|332877978|ref|ZP_08445709.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684082|gb|EGJ56948.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 272
Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 109/257 (42%), Gaps = 9/257 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L I +FDSG+GG + +++ LMP + +++AD+ PYG + +
Sbjct: 7 LTAPIGLFDSGVGGTTIWKEINALMPNENTLFLADNKNAPYGEKTKEEIIALCDANTQFL 66
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + V+ACNT T LR + + F+G PAIK A + + I +L+T T
Sbjct: 67 L-NHNAKIIVVACNTGTTNAIAYLRDKYKQVPFIGIEPAIKPAGLQSITKKIGVLATRRT 125
Query: 132 LRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
L + + I L +E +++ ++ ++
Sbjct: 126 LTSDLFAKTSEHLKQEEKIEIIEQVGEGLVDLIEAG----QMESAKMTALLQKYLQPMVA 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DD 247
+ D +VL CTHYP ++ ++ P + +D+ ++AR+ R +L + + +
Sbjct: 182 EGIDYLVLGCTHYPYLLPQIQRFIPVSIKVIDSGYAVARQTRNILAQYHLLNEKQDYVAT 241
Query: 248 HALFLSGKPDIAMRRLM 264
H +G +I +
Sbjct: 242 HKWVTNGNLEILKQFAA 258
>gi|83647752|ref|YP_436187.1| glutamate racemase [Hahella chejuensis KCTC 2396]
gi|83635795|gb|ABC31762.1| glutamate racemase [Hahella chejuensis KCTC 2396]
Length = 271
Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 84/270 (31%), Positives = 128/270 (47%), Gaps = 7/270 (2%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ N K LI DSG GGL + +R P +Y+AD +PYG+ + ++
Sbjct: 2 MANAHETKGPVAPALIIDSGSGGLSIWGHIRRHTPWLPTLYLADFGFYPYGDKSEQEIET 61
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R+ + + + Y L V+ACNTA T++ D LR+ F +G VPAIK AA +T+ +
Sbjct: 62 RVRHIVEQVCECYPAQLIVVACNTASTVVLDHLRARFQQ-PVVGVVPAIKTAATHTKKQV 120
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T T+RR YT LI + C + V + L E++ G ++ I+
Sbjct: 121 IGLLATQGTVRRAYTDELIRDFARHCQVIKVGAPDLVQWGEDWVRGRSPDMARLRGVIQP 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTH+PL+ QL+P ++W+D+ ++IARR LL +
Sbjct: 181 FL----EAEADQVVLGCTHFPLLKPFLYQLAP-DINWVDSGEAIARRVAYLLQAQQSEGG 235
Query: 243 RVFDDHALFLSGKP-DIAMRRLMQGFGLKS 271
H F SG D R G S
Sbjct: 236 EESTSHRAFYSGDKQDSEWERGAMALGFSS 265
>gi|94265271|ref|ZP_01289030.1| Glutamate racemase [delta proteobacterium MLMS-1]
gi|93454252|gb|EAT04568.1| Glutamate racemase [delta proteobacterium MLMS-1]
Length = 264
Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 9/257 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ V + + +P++ IY D PYG+ + +L +
Sbjct: 2 IGIFDSGVGGMTVARAIEQALPDHRLIYFGDLARTPYGSKSAETITAYSRQNVDFLL-QQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACN+A ++ LR+++ F PA+++A + G + ++ T AT+R
Sbjct: 61 GAKLLVVACNSAASVATAALRASYELPLFEVISPAVREAVHCSSGGRVGVIGTRATIRSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ C + + +L VEE + + E K + + + D +
Sbjct: 121 VYEELLQRQRPACRVFAAACPLLVPLVEEGW----LDKRETKMILRRYLAPLKRHQVDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI----NTHQTRVFDDHALF 251
VL CTHYPL+ + ++ V +D+S ++A + L + Q R ++ +
Sbjct: 177 VLGCTHYPLLKEMIQRRIGRRVRVIDSSAALAGELQRFLAAHPEIEQSLQRRREGENLYY 236
Query: 252 LSGKPDIAMRRLMQGFG 268
+S + A + FG
Sbjct: 237 VSDVTEAATATAHRIFG 253
>gi|148381502|ref|YP_001256043.1| glutamate racemase [Clostridium botulinum A str. ATCC 3502]
gi|153933747|ref|YP_001385877.1| glutamate racemase [Clostridium botulinum A str. ATCC 19397]
gi|153937684|ref|YP_001389284.1| glutamate racemase [Clostridium botulinum A str. Hall]
gi|166231033|sp|A7FZC4|MURI_CLOB1 RecName: Full=Glutamate racemase
gi|166231034|sp|A5I7T7|MURI_CLOBH RecName: Full=Glutamate racemase
gi|148290986|emb|CAL85122.1| glutamate racemase [Clostridium botulinum A str. ATCC 3502]
gi|152929791|gb|ABS35291.1| glutamate racemase [Clostridium botulinum A str. ATCC 19397]
gi|152933598|gb|ABS39097.1| glutamate racemase [Clostridium botulinum A str. Hall]
Length = 257
Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L
Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 64 MSKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDDHAL 250
IVL CTHYP I ++++ +D S +R + L N T + RV
Sbjct: 179 SSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLTEENRVGKVTIF 238
>gi|110639009|ref|YP_679218.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
gi|110281690|gb|ABG59876.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
Length = 269
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 65/248 (26%), Positives = 105/248 (42%), Gaps = 7/248 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
Q I IFDSGIGGL V + L+P IY D FPYG+ A++ + +
Sbjct: 1 MTDAQRPIGIFDSGIGGLTVAYAVNQLLPNESIIYFGDTAHFPYGDKSTAAIQSYAVKIT 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAV-PAIKQAAAYTQSGLISIL 126
+L ++ V+ IACN+A + ++ S A + + P ++ A G + ++
Sbjct: 61 DMLLQQHCKVIL-IACNSASSAAYQLVKEYAGSRAKVINVIDPIVRYVGAKYPKGKVGLI 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ I + + +++ +LA +EE I E I +
Sbjct: 120 GTKKTVSSNVYQRKIDKLNKEITLKALATPLLAPMIEEGYFNNAISE----SIILNYLQD 175
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
K + ++L CTHYPLI L VD +D+SD +A + L N T
Sbjct: 176 KSLDGIESLILGCTHYPLIKEQINNLYKGSVDVIDSSDIVAAAVKDYLADTNLLNTDADV 235
Query: 247 DHALFLSG 254
H ++S
Sbjct: 236 QHKFYVSD 243
>gi|134094154|ref|YP_001099229.1| glutamate racemase [Herminiimonas arsenicoxydans]
gi|133738057|emb|CAL61102.1| Glutamate racemase [Herminiimonas arsenicoxydans]
Length = 284
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 12/274 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M P + I IFDSG+G L VL+ ++ +P H + AD PYG D +
Sbjct: 1 MSFSATPDPVAAEAPIGIFDSGVGALSVLRHIQARLPSEHLLCFADSGYAPYGGKPDAEI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + +L K V+ACNTA D LR +P + +G P +K AA +++S
Sbjct: 61 VERTLAIAAFLLTKK-VKAIVVACNTATAAAIDALRQQYPDLIVVGVEPGLKPAAVFSKS 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIH--LVSSMILASRVEEYACGIKIKEDEIKK 178
G +L+T +TL L + + + L ++E+ ++ E
Sbjct: 120 GKAGVLATASTLASHRFIALRDQIAETTGVTFLTQACVGLVEQIEKG----ELSSPETAA 175
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW----PVDWLDNSDSIARRARCLL 234
+E D + L CTHYP + + ++ PV +D ++++R+ LL
Sbjct: 176 MLERYVTPLLRGGADTLALGCTHYPFVQPLIEAIAERESAVPVTIIDTGEAVSRQLERLL 235
Query: 235 PRINTHQ-TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + + F +G +
Sbjct: 236 QQRGLQRFENMPGSLQAFTTGSQSALEHAFAKLL 269
>gi|167772360|ref|ZP_02444413.1| hypothetical protein ANACOL_03737 [Anaerotruncus colihominis DSM
17241]
gi|167665463|gb|EDS09593.1| hypothetical protein ANACOL_03737 [Anaerotruncus colihominis DSM
17241]
Length = 269
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 4/249 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I +FDSG+GGL ++++R L+PE H IY D PYG+ ++K + L
Sbjct: 3 QRAIGVFDSGLGGLTTVRELRRLLPEEHIIYFGDTGRVPYGSRGREIIRKYAVQDI-RFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + + AC T ++I E+ + +PA + A A + +G I ++ T ATL
Sbjct: 62 RRFDVKIIIAACGTVSSVITPEIVESAGVPFSGVVLPAAQAACAASTNGRIGVIGTAATL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R I H + + VE I+ + K +
Sbjct: 122 RSGAYGRAIRGIRPDAHTFGNACPLFVPLVENGF--IQPDNEITIKVAQTYLQPMIENEV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPLI V +L V +D+ +AR A+ LL R + ++
Sbjct: 180 DTLILGCTHYPLIRPVIDRLLRSRVTLIDSGAQVARWAQTLLTREDML-GAGNGGAEYYV 238
Query: 253 SGKPDIAMR 261
S P++ +
Sbjct: 239 SDSPEMFIE 247
>gi|254478075|ref|ZP_05091458.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
gi|214035937|gb|EEB76628.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
Length = 278
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 8/254 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E I + DSG+GG+ VL+++ ++PE +IY D + PYGN ++K +
Sbjct: 11 VEMDKNGPIGVIDSGVGGITVLKRLLEILPEEDYIYFGDTLRVPYGNRPKEEIEKFTREI 70
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L K + VIACNT + I ++ + + F IK A T +G I +++
Sbjct: 71 VNY-LKKQKVKAVVIACNTICSSIN---KNDYEILMFGILEAGIKSAVEATSNGRIGVIA 126
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ I + + L VE + I ++ C E
Sbjct: 127 TKRTVESEAYLKGIKRLNRNAMVFQKACPELVLIVENGF----YEASSIYTAVKKCTEEF 182
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
K D +VL CTH+P+++ ++ V +D + +A + L N + +
Sbjct: 183 LEKDIDTLVLGCTHFPILLPFIERVVDNKVTVVDPAIKLAHEVKKYLVENNLVKDKKGGQ 242
Query: 248 HALFLSGKPDIAMR 261
++G+ + ++
Sbjct: 243 IRFLVTGEKENFIK 256
>gi|83312625|ref|YP_422889.1| glutamate racemase [Magnetospirillum magneticum AMB-1]
gi|82947466|dbj|BAE52330.1| Glutamate racemase [Magnetospirillum magneticum AMB-1]
Length = 284
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 61/254 (24%), Positives = 102/254 (40%), Gaps = 5/254 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL V +R MP+ +Y+ D PYG + + + +++K
Sbjct: 21 PVGIFDSGVGGLTVAAAIRRAMPDERLLYLGDVARQPYGTKSPRTVTRYAVQAAEFLVEK 80
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPATLR 133
V+ACNTA + + + FP + LG V A AA + G I + +T T R
Sbjct: 81 G-IKALVVACNTASAVALEAIAERFPGLPVLGVVEAGADGAARASARGRIVVAATEGTCR 139
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + V + + EE I + + + G + D
Sbjct: 140 SEAYERAIARRRDGALVRCVPCPLFVALAEEGLTDGPIVDSVARHYL-GSLFDGTEPG-D 197
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+PL+ +L+ V +D +++ + LL + H L +
Sbjct: 198 CLVLGCTHFPLLAPALSRLAGPEVTLVDCAEATSSMLVRLLEGREAPKGSGGGLH-LIST 256
Query: 254 GKPDIAMRRLMQGF 267
P+ R + F
Sbjct: 257 DAPERFARMAGKLF 270
>gi|118586558|ref|ZP_01544000.1| glutamate racemase [Oenococcus oeni ATCC BAA-1163]
gi|118432999|gb|EAV39723.1| glutamate racemase [Oenococcus oeni ATCC BAA-1163]
Length = 281
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 15/271 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN I DSG+GGL V+++ +P +V D+ PYG ++K
Sbjct: 1 MDNR--------GIGYIDSGLGGLTVVREALKQLPNESVYFVGDEARMPYGPRPTVEIQK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA-AAYTQSG 121
+ + ++ K+ V+ACNTA +L++ + + +G + A A + T++
Sbjct: 53 FTLQMADFLVKKHNIKALVVACNTATAQALPQLKA-YLEIPVIGVISAGALAGISATRNL 111
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++++ T +T+ + + + S I + VE G + + + I
Sbjct: 112 HVNVIGTQSTVESKAYYDQLIALNSDLVIEQKALPEFVQLVESDIAGTSQGKQIVYQAIH 171
Query: 182 GCFIEK-EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT- 239
EK +GK++D +VL CTH+P++ + V +D + + +L + N
Sbjct: 172 NWMEEKNDGKKSDTLVLGCTHFPILKKEIQAAVDKNVAVVDPASEEILQTAEILRKNNAF 231
Query: 240 HQTRVFDDHA---LFLSGKPDIAMRRLMQGF 267
H ++ + H + +G + +
Sbjct: 232 HDSKNINHHEKDVFYTTGNIGRFSKFTREWL 262
>gi|226951018|ref|YP_002806109.1| glutamate racemase [Clostridium botulinum A2 str. Kyoto]
gi|254766112|sp|C1FNG8|MURI_CLOBJ RecName: Full=Glutamate racemase
gi|226841163|gb|ACO83829.1| glutamate racemase [Clostridium botulinum A2 str. Kyoto]
Length = 257
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 6/231 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K +D L
Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALTSN-ATDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 64 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDIIYNYLKDKFSKYDNEKI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
IVL CTHYP I ++++ +D S +R + L N +
Sbjct: 179 SSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREE 229
>gi|313893755|ref|ZP_07827321.1| glutamate racemase [Veillonella sp. oral taxon 158 str. F0412]
gi|313441319|gb|EFR59745.1| glutamate racemase [Veillonella sp. oral taxon 158 str. F0412]
Length = 267
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 7/247 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-FLACRIAEAL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K L VIACNT + DE+R S+ +G +K A + ++S I I++T AT+
Sbjct: 65 EKQPVKLMVIACNTFTVVALDEVRERV-SVPVIGVSQGVKTAISESKSNTIGIMATVATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ ++ E +
Sbjct: 124 NSHIHKHVALEVDPEVLVWEQPCPELAGLIEQGHLDDFF----VRDVCEEYVEPLLSREI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
DV+VL CTH+P + + +L+ + ++D + + +L N + + L+
Sbjct: 180 DVVVLGCTHFPFVKPLLEELTAGRIQFVDPAYETSNLVCRILEHKNLYNPQENLGTVKLY 239
Query: 252 LSGKPDI 258
+ ++
Sbjct: 240 FTKDIEL 246
>gi|217976585|ref|YP_002360732.1| glutamate racemase [Methylocella silvestris BL2]
gi|217501961|gb|ACK49370.1| glutamate racemase [Methylocella silvestris BL2]
Length = 279
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 109/266 (40%), Positives = 157/266 (59%), Gaps = 8/266 (3%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ IL+FDSG+GGL V ++ L P+ F+Y AD+ GFPYG AL R++ +
Sbjct: 1 MSRPPKILVFDSGLGGLTVFAEIAALRPDAQFVYAADEAGFPYGALPATALAPRVLAVMG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++D + P ++VIACNTA TL+ LR+ FP + F+G VPAIK AA +QS +IS+L+TP
Sbjct: 61 RLIDLFSPDVAVIACNTASTLVLPHLRAAFPDLPFVGTVPAIKPAAQTSQSKMISVLATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ R YT LI +Y + C + LV S LAS E++ G + I EI F+E EG
Sbjct: 121 GTVARDYTRGLIEAYAADCKVMLVGSSRLASLAEDFMQGDAPSDAAILDEIAPAFVEAEG 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-----NTHQTRV 244
+RTD I LACTHYPL++ F +L+PWPV W+D + +IARR +L +T
Sbjct: 181 RRTDAIALACTHYPLLIAQFERLAPWPVAWIDPAPAIARRTDHVLTAELGFAAGGGETAR 240
Query: 245 FDDHALFL-SGKPDIAMRRLMQGFGL 269
A+F S + +R ++ G+
Sbjct: 241 KPALAVFTGSKEAGPKLREALRLRGI 266
>gi|313680798|ref|YP_004058537.1| glutamate racemase [Oceanithermus profundus DSM 14977]
gi|313153513|gb|ADR37364.1| glutamate racemase [Oceanithermus profundus DSM 14977]
Length = 260
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 113/264 (42%), Gaps = 19/264 (7%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
L+ I +FDSG+GGL VL+ +R +P F+Y D PYG+ +++ +
Sbjct: 5 AHAPLEQPIGVFDSGVGGLTVLEALRRALPGRDFLYFGDTARVPYGSKPPELVRRFAWEI 64
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+L + L V+ACNTA ++ +L + G + A + G + ++
Sbjct: 65 SGFLLRQGAVAL-VVACNTASSVALADLARL--GVPVTGVIDPA--VAEAERYGHVGVIG 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ + + + +++ + VEE + D + + + ++E
Sbjct: 120 TRATVASGAYQSRLE--ARGKRVWSLATPLFVPIVEEG-----LWSDGVAELVARHYLEG 172
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ ++L CTHYP + + +L P + +D+++ AR LP
Sbjct: 173 APDDLEALILGCTHYPYLKPLLERLRP-GLTLIDSAEPTARAVARSLP-----AGPGSGR 226
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
+++G P+ A R L G+ +
Sbjct: 227 VVHYVTGDPE-AYRALAARLGVPA 249
>gi|327403118|ref|YP_004343956.1| glutamate racemase [Fluviicola taffensis DSM 16823]
gi|327318626|gb|AEA43118.1| glutamate racemase [Fluviicola taffensis DSM 16823]
Length = 275
Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL VL+++R +PEY F+Y+ D+ PYG+ + + D
Sbjct: 5 GPIGVFDSGYGGLTVLKEIREKLPEYDFLYLGDNARAPYGSRSFPVIYDYTWQAVQALFD 64
Query: 74 KYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ L ++ACNTA +L P LG + P+ ++ ++++ + +L+
Sbjct: 65 R-DCSLVILACNTASAKALRNIQRIKLPELHPDKRVLGVIRPSTEELDKHSKTKHVGVLA 123
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+R + + ++ + + +E I++++ +
Sbjct: 124 TDGTIRSNSYQIELAKFAPDLVVNQHACPMWVPLIENNKFDSPGGIYFIQEDLVQLL--E 181
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ + D I+LACTHYP+++ + L P ++ L +A L R +
Sbjct: 182 KDPKIDTILLACTHYPILLDQIKGLLPEQIEVLPQGQIVANSLADYLDRHPEMAAKCSKG 241
Query: 246 DDHALFLSGKPDIAMRRLM 264
+ +
Sbjct: 242 GKVNYLTTESAADFSEKAS 260
>gi|291288784|ref|YP_003505600.1| glutamate racemase [Denitrovibrio acetiphilus DSM 12809]
gi|290885944|gb|ADD69644.1| glutamate racemase [Denitrovibrio acetiphilus DSM 12809]
Length = 256
Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 10/246 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I IFDSG+GGL V + + PE Y+ D PYG+ + + ++D
Sbjct: 2 AIGIFDSGVGGLTVYKTISEHFPELDMHYLGDTARVPYGSRSQETVINYSLQCAGFLVDN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ ++ACNTA + D +R F P A T++ I ++ T AT+R
Sbjct: 62 FDIDTIIVACNTASSYAIDHIRKKFKVNVIGVVEPGSYSALQVTENNKIGVIGTRATVRS 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + S I + + VEE I + ++ ++ D
Sbjct: 122 GSYVKALKAIRSDVEITQTACPLFVPIVEEMLVDTDIADMVVRHYLDN----MMTTGADT 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ +V + P + +D+S++I L +N H R ++L+
Sbjct: 178 LILGCTHYPLLKNVIAKFYP-DIKIVDSSEAIIDCINELKLNVNQHSKR-----EIYLTD 231
Query: 255 KPDIAM 260
+
Sbjct: 232 ESPAFE 237
>gi|238028090|ref|YP_002912321.1| glutamate racemase [Burkholderia glumae BGR1]
gi|237877284|gb|ACR29617.1| Glutamate racemase [Burkholderia glumae BGR1]
Length = 286
Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL+ R +P+ F+YVAD PYG +D + +R + + + +
Sbjct: 16 VGIFDSGLGGLSVLRAARAHLPDEAFVYVADSRYAPYGERDDAFIIERTLAIGEWLAARG 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA +R T ++ +G P IK AA + S + +L+T ATLR
Sbjct: 76 AKAL-VVACNTATAQSIAVVRETL-AIPLIGVEPGIKPAALASTSRVAGVLATAATLRSA 133
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI + C L L +E G ++ + G D +
Sbjct: 134 RFEALIARHAGDCRFLLQPGHGLVQAIERGDTG----SAGLRTLLAGYLEPMLAAGADTL 189
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALFLS 253
VL CTHYP + R+L+ + +D ++IAR+ +L L+ +
Sbjct: 190 VLGCTHYPFLDATIRELTQNRLTLVDTGEAIARQLARVLDEHGLRSPAGAEPPPTRLYST 249
Query: 254 GKPDIAMRRLMQGFGLKS 271
GL +
Sbjct: 250 DDGTRLQALAATLLGLDA 267
>gi|312132407|ref|YP_003999746.1| muri [Bifidobacterium longum subsp. longum BBMN68]
gi|311772761|gb|ADQ02249.1| MurI [Bifidobacterium longum subsp. longum BBMN68]
Length = 264
Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG+ V +++ MP H +Y D PYG ++ + +
Sbjct: 4 SAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVERFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--------GLIS 124
+ IACNTA + ++LR + + +G PA+K A +
Sbjct: 64 -RQGVKAVAIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQRVI 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TP TLR + L+ + S I L VE G D + + + G F
Sbjct: 122 VAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLHGYF 178
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + + D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 179 DQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPED 238
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
+ P + L +
Sbjct: 239 ATGGVELANSDPSERIAELSRKL 261
>gi|332638684|ref|ZP_08417547.1| glutamate racemase [Weissella cibaria KACC 11862]
Length = 281
Score = 259 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 101/270 (37%), Gaps = 19/270 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN +I DSGIGGL V+++ +P+ YV D PYG +
Sbjct: 1 MDNR--------AIGYIDSGIGGLTVVKQALKQIPDEQVYYVGDTARMPYGPRPQEEVLG 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ +L K + V+ACNTA +L++ + +G + P + A + G
Sbjct: 53 FTWQMVRYLLKK-DIKMLVVACNTATAAALPDLQAKL-DIPVVGVIQPGVDAALRKSADG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T T++ N + ++ +++ E + ++ ++
Sbjct: 111 EIGVIATAGTVKSLAYYNGLLQGNRAANVVQLAAPEFVDVAE----NHDYTSEFARQVVK 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH- 240
+ + D ++L CTH+PL+ + ++ V +++ L + +
Sbjct: 167 EKLSYFKNHQVDTLILGCTHFPLMENFIQEAMGPQVTLVNSGAETISTVVEFLDKFDLRR 226
Query: 241 ---QTRVFDDHALFLSGKPDIAMRRLMQGF 267
+D F +G +
Sbjct: 227 ASANPADHNDDEYFTTGSVKRFATIGGRWL 256
>gi|187777456|ref|ZP_02993929.1| hypothetical protein CLOSPO_01023 [Clostridium sporogenes ATCC
15579]
gi|187774384|gb|EDU38186.1| hypothetical protein CLOSPO_01023 [Clostridium sporogenes ATCC
15579]
Length = 260
Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 6/246 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L
Sbjct: 8 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 67 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 126 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
IVL CTHYP + ++++ +D S ++ + L N +
Sbjct: 182 SSIVLGCTHYPFVEETLKEVTHNKACIIDGSLGTSKELKRQLEDRNMLRKESRIGKVTIF 241
Query: 253 SGKPDI 258
+ K D
Sbjct: 242 NSKEDK 247
>gi|222151562|ref|YP_002560718.1| hypothetical protein MCCL_1315 [Macrococcus caseolyticus JCSC5402]
gi|222120687|dbj|BAH18022.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 247
Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 7/237 (2%)
Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92
+P Y+ D+ PYG +++ + L +++K+ + VIACNTA
Sbjct: 1 MRQLPNETIYYLGDEARCPYGPRTQEEVRRFTIQLAEFLINKH-IKMLVIACNTATAAAL 59
Query: 93 DELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151
+ LR TF ++ +G + P + A T++ + +L T T+R IH +
Sbjct: 60 ESLRETF-NIPIIGVIEPGARTAIMTTENNHVLVLGTEGTIRSHAYKEKIHMINPHIEVA 118
Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
S VE E E + I E + ++D ++L CTHYPL+ +
Sbjct: 119 GKSCPEFVPLVESRRY---KDEAESMRIISRVLQEFKTHKSDTVILGCTHYPLLQEYINR 175
Query: 212 LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLMQGF 267
+ + AR LL N H T+ H F++G + +
Sbjct: 176 FFDNQKKVISSGLETAREVSALLTFRNIHVTQPATVAHRFFVNGDAEHFTEIAKEWL 232
>gi|307545641|ref|YP_003898120.1| glutamate racemase [Halomonas elongata DSM 2581]
gi|307217665|emb|CBV42935.1| glutamate racemase [Halomonas elongata DSM 2581]
Length = 258
Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 83/258 (32%), Positives = 131/258 (50%), Gaps = 9/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSG+GGL V+ +R +PE Y D+ PYG ED L R++ +
Sbjct: 1 MAGPILVFDSGVGGLSVVASLRRRLPEAALAYACDNAMLPYGMREDDWLVGRILEVCESA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ V+ACNTA TL + LR ++ +G VPAIK AA +++ I +L+T AT
Sbjct: 61 VAASGCAGLVVACNTASTLALEALRERL-TVPVVGTVPAIKPAAGMSETRHIGLLATSAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + C + +++ L + E + G + D +++ + +
Sbjct: 120 VGRAYTLRLIREFAGDCRVTRIAADPLVTEAERWVAGERPDLDVLRRTLSP---MAQMPD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PL+ + +P PV W+D+ D+IARRA ++ HQ R +
Sbjct: 177 LDTMVLGCTHFPLLRDWLIEFAPRPVRWVDSGDAIARRAGQVMA---DHQRRRGSETGWV 233
Query: 252 LSGKPDIAMRRLMQGFGL 269
P A+ R + GFG
Sbjct: 234 T--APSEALSRGLSGFGF 249
>gi|168183642|ref|ZP_02618306.1| glutamate racemase [Clostridium botulinum Bf]
gi|237797023|ref|YP_002864575.1| glutamate racemase [Clostridium botulinum Ba4 str. 657]
gi|259509811|sp|C3KWB8|MURI_CLOB6 RecName: Full=Glutamate racemase
gi|182673216|gb|EDT85177.1| glutamate racemase [Clostridium botulinum Bf]
gi|229262938|gb|ACQ53971.1| glutamate racemase [Clostridium botulinum Ba4 str. 657]
Length = 257
Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 6/231 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L
Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNTPYGTKKVEEVKA-LTFNATDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 64 MSKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDDEKI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
IVL CTHYP + ++++ +D S +R + L N +
Sbjct: 179 SSIVLGCTHYPFVEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREE 229
>gi|170755805|ref|YP_001783201.1| glutamate racemase [Clostridium botulinum B1 str. Okra]
gi|229486236|sp|B1IH18|MURI_CLOBK RecName: Full=Glutamate racemase
gi|169121017|gb|ACA44853.1| glutamate racemase [Clostridium botulinum B1 str. Okra]
Length = 257
Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K L F +D L
Sbjct: 5 DKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKA-LTFNATDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP TL
Sbjct: 64 MNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 123 AEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEKI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
IVL CTHYP I ++++ +D S +R + L N +
Sbjct: 179 SSIVLGCTHYPFIEKTLKEVTYNKACIIDGSFGTSRELKRQLKNSNMLREE 229
>gi|304312822|ref|YP_003812420.1| Glutamate racemase [gamma proteobacterium HdN1]
gi|301798555|emb|CBL46785.1| Glutamate racemase [gamma proteobacterium HdN1]
Length = 276
Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats.
Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 8/259 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
S+++FDSGIGGL V +++R MP YVAD+ FPYG ++ L +R+ L
Sbjct: 3 ALTAPPASVILFDSGIGGLSVAREIRAAMPGLDINYVADNRIFPYGLQKESVLIERVCAL 62
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ +Y P VIACN+A T++ D LR+ + +G VPAIK AAA +Q +I +L+
Sbjct: 63 MPILEARYSPGAIVIACNSASTVVLDALRTQ-TQVPVIGVVPAIKPAAAQSQRRVIGLLA 121
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP T++R+YT LI + + C + LV S L S E GI I E+ + +
Sbjct: 122 TPGTIQRSYTRRLIDQFANDCTVLLVGSSALVSLAENKLRGIPIDLQEVSNIVAPFCHAE 181
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245
D++VL CTH+P + Q+ P +D+ ++IARR R +L
Sbjct: 182 TP--PDIVVLGCTHFPFLREELMQVLPENTRLIDSGEAIARRTRHILEAQGLEAQGAAFL 239
Query: 246 ---DDHALFLSGKPDIAMR 261
F + + D A
Sbjct: 240 ERVPTLHFFFTEETDSAHE 258
>gi|20806735|ref|NP_621906.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4]
gi|24418566|sp|Q8RD38|MURI1_THETN RecName: Full=Glutamate racemase 1
gi|20515192|gb|AAM23510.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4]
Length = 266
Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 8/251 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
I I DSG+GG+ VL+++ ++PE +IY D + PYGN ++K + +
Sbjct: 2 DKNGPIGIIDSGVGGITVLKRLLEILPEEDYIYFGDTLRVPYGNRPKEEIEKFTREIVNY 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K + VIACNT + I ++ + + F IK A T +G I +++T
Sbjct: 62 -LKKQKVKAVVIACNTICSSIN---KNDYEILMFGILEAGIKSAVEATSNGRIGVIATKR 117
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ I + + L VE + I ++ C E K
Sbjct: 118 TVESEAYLKGIKRLNRNAMVFQKACPELVLIVENGF----YEASSIYSAVKKCTEEFLEK 173
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+P+++ ++ V +D + +A + L N + +
Sbjct: 174 DIDTLVLGCTHFPILLPFIERVVDNKVTVVDPAIKLAHEVKKYLVENNLVKDKKGGQIRF 233
Query: 251 FLSGKPDIAMR 261
++G+ + ++
Sbjct: 234 LVTGEKENFIK 244
>gi|172061157|ref|YP_001808809.1| glutamate racemase [Burkholderia ambifaria MC40-6]
gi|171993674|gb|ACB64593.1| glutamate racemase [Burkholderia ambifaria MC40-6]
Length = 287
Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats.
Identities = 71/276 (25%), Positives = 112/276 (40%), Gaps = 12/276 (4%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + + P + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++
Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSQHAPYGPRDEA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L + VIACNTA +R S+ +G P IK AAA +
Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+G+ +L+T +TL L+ Y + L +E ++
Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+E D +VL CTHYP R + + +D SD+IAR+ +L
Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLTIVDTSDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
TR +G GL +
Sbjct: 235 LRAPAGTRAAPP-RFCSTGDGRQLHALASTLLGLDA 269
>gi|229817186|ref|ZP_04447468.1| hypothetical protein BIFANG_02445 [Bifidobacterium angulatum DSM
20098]
gi|229784975|gb|EEP21089.1| hypothetical protein BIFANG_02445 [Bifidobacterium angulatum DSM
20098]
Length = 259
Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 98/253 (38%), Gaps = 7/253 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ V +++ MP+ +Y D PYG ++ + +
Sbjct: 5 APIGVFDSGLGGISVARQIAHDMPDEKVLYFGDSANAPYGTKTPQQVRDLSFAIVEQFV- 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
K VIACNTA + D LR T+ + +G PA+K A + + + +TP T
Sbjct: 64 KQGVKAVVIACNTATSAAADALRDTY-DIPIIGMEPALKVACDRGHGHRQRVIVAATPLT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
LR + L+ + + I L + VE D + + + F +
Sbjct: 123 LRERKFAKLMDRFKADHTIFPEPCPGLVNIVEHGQLD---DHDTVMRTLHHYFGNYDLPT 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+ FR+L P +D ++ R +L + +
Sbjct: 180 IDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLHVVLESLGKLAPEGAEGGVTI 239
Query: 252 LSGKPDIAMRRLM 264
+ L
Sbjct: 240 ANSDTSPRTAELA 252
>gi|251794653|ref|YP_003009384.1| glutamate racemase [Paenibacillus sp. JDR-2]
gi|247542279|gb|ACS99297.1| glutamate racemase [Paenibacillus sp. JDR-2]
Length = 258
Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 8/242 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I IFDSG+GGL VL + +P ++IY+AD PYG + ++ ++ ++ +
Sbjct: 2 TIGIFDSGLGGLTVLAEALKRLPAENYIYMADTKHVPYGTKSEEEVRDFVLQTVEQMVAE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATL 132
V+ACNTA ++ +ELR + S +G PA+K A + + + +TP TL
Sbjct: 62 G-IDALVVACNTATSIAINELRERY-SFPIIGMEPAVKPAVEMNRATGKKVLVWATPLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ + + + L E ++ +D +K +
Sbjct: 120 RMPKYYALVSRVDEEGIVDSLPMPELVQYCEA----LQFDKDVLKDYFLAKLAPYDLNEY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
++VL CTH+P + R + P + ++ + RR +L R R
Sbjct: 176 GILVLGCTHFPFYTSILRNVLPPHIQIVNGNLGTIRRLTAMLSRYGIGTGRGSGQVRFMC 235
Query: 253 SG 254
+G
Sbjct: 236 TG 237
>gi|238760127|ref|ZP_04621275.1| Glutamate racemase [Yersinia aldovae ATCC 35236]
gi|238701625|gb|EEP94194.1| Glutamate racemase [Yersinia aldovae ATCC 35236]
Length = 241
Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats.
Identities = 71/237 (29%), Positives = 123/237 (51%), Gaps = 4/237 (1%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L
Sbjct: 2 LPDLHYIYAFDNVAFPYGEKSGEFIIERVVEIVTAVQQRHPLAIVVIACNTASTVSLPAL 61
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S
Sbjct: 62 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTRDLIERFATDCKIELLGS 120
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + ++ +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 121 SELVELAETKLHGGVVPQEALKKILHPWLAMREP--PDTIVLGCTHFPLLTEELAQVLPE 178
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+D+ +IARR L+ + ++ A ++ D A+ ++QG+G +
Sbjct: 179 GTRMVDSGAAIARRTAWLISSQENVVSSQDENIAYCMALNADTDALLPVLQGYGFPT 235
>gi|238785771|ref|ZP_04629743.1| Glutamate racemase [Yersinia bercovieri ATCC 43970]
gi|238713305|gb|EEQ05345.1| Glutamate racemase [Yersinia bercovieri ATCC 43970]
Length = 241
Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats.
Identities = 71/237 (29%), Positives = 123/237 (51%), Gaps = 4/237 (1%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L
Sbjct: 2 LPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 61
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S
Sbjct: 62 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTLDLIARFATDCKIELLGS 120
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + + +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 121 SELVELAESKLHGGVVSVEALKKILHPWLAMREP--PDTIVLGCTHFPLLAEELAQVLPE 178
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+D+ +IARR L+ + ++ A ++ D A+ ++QG+G ++
Sbjct: 179 GTRMVDSGAAIARRTAWLISSQENVVSSQDENMAYCMALNTDTDALLPVLQGYGFQT 235
>gi|284043326|ref|YP_003393666.1| glutamate racemase [Conexibacter woesei DSM 14684]
gi|283947547|gb|ADB50291.1| glutamate racemase [Conexibacter woesei DSM 14684]
Length = 283
Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 9/261 (3%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ I +FDSG+GGL VL ++ +P F+Y+ D FPYG+ L+
Sbjct: 1 MPATTERAASDRPIAVFDSGVGGLTVLHELLVSLPSEDFLYLGDTARFPYGDKSQEELRV 60
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAV-PAIKQAAAYTQ 119
+ +L L V+AC +A L + LG + PA + A T
Sbjct: 61 CSAEIADHLLVAGA-KLLVVACGSATAAALPLLEERLAGSGVDVLGVIAPAAQLAVEATA 119
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SG I +L+TPAT+ +N I + + V LA + G E + +
Sbjct: 120 SGRIGVLATPATVASGAYANAIAASDPHVRLESVPCPDLAPII---QSGFPFDERVV-ET 175
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ D ++L THYPL+ + +++ V + + + + R L +
Sbjct: 176 VRRYTAPLRAAEVDTVILGSTHYPLVAPMLQRMLGRGVHLVTSGEGVVRSVERALGARDL 235
Query: 240 HQTRVFD-DHALFLSGKPDIA 259
R + D+ +G +
Sbjct: 236 LNGRDGEGDYRFHCTGDVEAF 256
>gi|212550932|ref|YP_002309249.1| glutamate racemase [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212549170|dbj|BAG83838.1| glutamate racemase [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 276
Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats.
Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 11/251 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K++ SI IFDSG GG +L+K+R+ +P Y F+Y+ D+ PYG + + +
Sbjct: 2 KVKGSIGIFDSGYGGFTILEKIRYRLPRYDFLYLGDNARAPYGTRSFEIVYEFTLQSVRK 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYTQSGLIS 124
+ +K L ++ACNT+ ++ P LG + P ++ TQ+ I
Sbjct: 62 LFEKG-CHLVILACNTSSAKALRTIQQNDLPSIAPQKRLLGVIRPTVEAVGRLTQTRHIG 120
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L T T+ S + + + + S VE + +K+ I
Sbjct: 121 VLGTQGTILSGSYSIEMKRLFPDIVVTGEACPMWVSLVENGEYDRPGADYFVKQHINSIL 180
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--T 242
+ D +VL CTHYPL+ +Q P V L +A L R
Sbjct: 181 --NKDPLIDTLVLGCTHYPLLETKIKQYLPKSVSILSQGKYVAEGLADYLRRHPEIDMCC 238
Query: 243 RVFDDHALFLS 253
+ +
Sbjct: 239 SKNSVECFYTT 249
>gi|167756830|ref|ZP_02428957.1| hypothetical protein CLORAM_02379 [Clostridium ramosum DSM 1402]
gi|237734546|ref|ZP_04565027.1| glutamate racemase [Mollicutes bacterium D7]
gi|167703005|gb|EDS17584.1| hypothetical protein CLORAM_02379 [Clostridium ramosum DSM 1402]
gi|229382366|gb|EEO32457.1| glutamate racemase [Coprobacillus sp. D7]
Length = 264
Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats.
Identities = 64/248 (25%), Positives = 103/248 (41%), Gaps = 11/248 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKI+ ++ I DSG+GGL VL++ +MP FIY D + PYG +
Sbjct: 1 MKIN-----EERNLPIGFIDSGLGGLSVLKEAIKIMPHEDFIYYGDSLNAPYGTKSVDEI 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ + +L L+V ACNTA + +LR +P + +G PAIK A
Sbjct: 56 RDLTFAIVDKLLKLGIKGLAV-ACNTATSAAVRQLRIMYPDLTIVGIEPAIKPAVESNHG 114
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G I +++TP T+++ + L+ Y + I VS L VE ++
Sbjct: 115 GEILVMATPMTIKQEKFNRLLDIYKDRAKIIPVSCKGLMEFVEHGNLNGSF----LEAYF 170
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINT 239
+ T+ IVL CTHYP + ++ + +D S + + L
Sbjct: 171 NETLVPYLNDTTETIVLGCTHYPFLRPYLKEFLGERRIQIIDGSHGTSCELKRQLAGKKL 230
Query: 240 HQTRVFDD 247
Q +
Sbjct: 231 LQKENHEG 238
>gi|237744604|ref|ZP_04575085.1| glutamate racemase [Fusobacterium sp. 7_1]
gi|256027373|ref|ZP_05441207.1| glutamate racemase [Fusobacterium sp. D11]
gi|260494464|ref|ZP_05814594.1| glutamate racemase [Fusobacterium sp. 3_1_33]
gi|289765339|ref|ZP_06524717.1| glutamate racemase [Fusobacterium sp. D11]
gi|229431833|gb|EEO42045.1| glutamate racemase [Fusobacterium sp. 7_1]
gi|260197626|gb|EEW95143.1| glutamate racemase [Fusobacterium sp. 3_1_33]
gi|289716894|gb|EFD80906.1| glutamate racemase [Fusobacterium sp. D11]
Length = 264
Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I IFDSG+GG VL++M +P +IY D+ FPYG+ + L+K + +
Sbjct: 6 QRIGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
K L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T
Sbjct: 66 -KNNCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKNTKNKNIAVISTKFT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
N S+ ++ ++ + A +E +KE+ ++ + K
Sbjct: 124 AESHGYKNKAKMLDSELNVKEIACIEFAQMIESGWDTFDN-----RKELLNKYLSEIPKN 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
TD +VL CTHYPLI + + +D + I RA L +N +
Sbjct: 179 TDTLVLGCTHYPLIRKDIEK--NTKIKVVDPAVEIVERATQTLTSLNLLNDKKEKGRIIF 236
Query: 251 FLSGK 255
F++G+
Sbjct: 237 FVTGE 241
>gi|319937290|ref|ZP_08011697.1| glutamate racemase [Coprobacillus sp. 29_1]
gi|319807656|gb|EFW04249.1| glutamate racemase [Coprobacillus sp. 29_1]
Length = 260
Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL VL ++ +P + IY+ D+ PYG+ H L +
Sbjct: 1 MDKPIGIFDSGVGGLTVLTALQKELPHENMIYIGDNAHCPYGDKTKHQLLSYTKEICDYF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + + V+ACNT + EL+ + + +G + + + I++T AT
Sbjct: 61 ISQ-NVKMIVLACNTTSANVLAELQELY-QVPVVGVIHSTVHDFLTRKKKCPLIIATHAT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +I Y I + + L +E I++ +E F K
Sbjct: 119 IESHKYREIIMHYEPDIQIFELETPALVPLIESGQYKKGIQD-----VLEHYFYPYVNK- 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D ++L CTHYP+++ +++ P +++ +S+SI + L + +++ +
Sbjct: 173 VDSLILGCTHYPIVLEQIKEVFPNK-EYISSSESICQEVASYLRVHHILNESNDSGATVI 231
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G P R +GF
Sbjct: 232 YTTGDPHEF-RYSSEGF 247
>gi|296393941|ref|YP_003658825.1| glutamate racemase [Segniliparus rotundus DSM 44985]
gi|296181088|gb|ADG97994.1| glutamate racemase [Segniliparus rotundus DSM 44985]
Length = 274
Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 7/259 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I +FDSG+GGL V + + L+P YVAD PYG +++ + +
Sbjct: 4 PNPEAPIGVFDSGVGGLTVARAVADLLPHEAMRYVADSAHQPYGPQSVAQVRRHALAVLD 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++D+ + VIACN+A + R +P +PA++ A A T+SG I ++ T
Sbjct: 64 SLVDEG-VKMLVIACNSASVACLADARERYPVPVVEVVLPAVRSALAATRSGRIGVIGTR 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + + + +E+ + E++
Sbjct: 123 ITIASRAYEDSFAAVAPHTSVVSAPCPRFVDFIEQGV----VSGPELEALALEYLAPLTA 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
DV+VL CTHYPL+ + + V + S+ A+ +L T + +
Sbjct: 179 ADVDVLVLGCTHYPLLADLIGAVMGPDVRLVSPSEETAKDIARILAAEGTARPAAQGPAS 238
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ ++ A +L+Q G
Sbjct: 239 VLVTQT--GASEQLLQWAG 255
>gi|319427429|gb|ADV55503.1| glutamate racemase [Shewanella putrefaciens 200]
Length = 270
Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats.
Identities = 82/252 (32%), Positives = 132/252 (52%), Gaps = 2/252 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILEVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T
Sbjct: 61 NSLTQPDIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI ++ ++C + + S +L E+ G + + +E++ F + +
Sbjct: 120 VNSAYVKMLITNFATECKVLIEDSEVLVLASEQKLLGNGFDPNIVTQEVQRIFSKPDAFN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TDV+VLACTH+PLI + P V +D+ +IA R LL T + +
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQTCSPILDPEITF 239
Query: 251 FLSGKPDIAMRR 262
+ +G D +
Sbjct: 240 YTTGNVDSEQAK 251
>gi|329119913|ref|ZP_08248587.1| glutamate racemase [Neisseria bacilliformis ATCC BAA-1200]
gi|327464069|gb|EGF10380.1| glutamate racemase [Neisseria bacilliformis ATCC BAA-1200]
Length = 270
Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 9/264 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
Q + +FDSG+GGL ++ + +P +Y D PYG ++ +
Sbjct: 1 MNTAAQCPVGVFDSGVGGLTNVRALMERLPMESIVYFGDTARVPYGVKSRATIEAFTAQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126
+L+ + VIACNT + ++R +M L + + A A T++ I ++
Sbjct: 61 VGFMLE-HDVKALVIACNTIAAVAGHKVRQMAGNMPVLDVISAGAEAALAATRNNHIGVI 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ + IH + V+ + VEE ++ ++ ++ +
Sbjct: 120 ATNTTVNSNAYAREIHRKNPAARVQSVACPLFVPLVEEGWLDHEVTRLTAREYLKPILAD 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRV 244
D +VL CTHYPL+ + + +P + +D++ + A A L +
Sbjct: 180 ----TADTLVLGCTHYPLLKPLLHREAP-GLTLVDSAATTAEAAARALCAHGLLNDGSGG 234
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
D+ ++S P + G
Sbjct: 235 APDYRFYVSDIPLRFQTIGERFLG 258
>gi|116235003|dbj|BAF34941.1| putative glutamate racemase [Hydrogenobacter thermophilus]
Length = 206
Score = 257 bits (659), Expect = 8e-67, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL++++ P +Y+ D PYG + + + ++ ++
Sbjct: 4 GVFDSGVGGLTVLKEIKKAFPSLDLVYLGDTARVPYGGKSKDTIIRYSLECAEFLI-RFD 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA + D L+ + G + P +++A +++ +I ++ T +T++
Sbjct: 63 IDLLVVACNTASSYALDILKKEL-GIPVFGVIKPGVRKALEVSKNKVIGVIGTKSTIKSG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + ++ + + VEE D + K ++ + + + D +
Sbjct: 122 VYQRSLME--AGSVVYAKACPLFVPLVEEGLT----HGDIVDKVVDFYLRDFKNTQMDTL 175
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+L CTHYPL+ + V +D++ ++
Sbjct: 176 ILGCTHYPLLAEAIKNYMG-DVQIVDSASALV 206
>gi|34762406|ref|ZP_00143407.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|237742084|ref|ZP_04572565.1| glutamate racemase [Fusobacterium sp. 4_1_13]
gi|256845420|ref|ZP_05550878.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
gi|294785284|ref|ZP_06750572.1| glutamate racemase [Fusobacterium sp. 3_1_27]
gi|27887931|gb|EAA24998.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|229429732|gb|EEO39944.1| glutamate racemase [Fusobacterium sp. 4_1_13]
gi|256718979|gb|EEU32534.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
gi|294486998|gb|EFG34360.1| glutamate racemase [Fusobacterium sp. 3_1_27]
Length = 264
Score = 257 bits (659), Expect = 8e-67, Method: Composition-based stats.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I IFDSG+GG VL++M +P +IY D+ FPYG+ + L+K + +
Sbjct: 6 QKIGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
K L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T
Sbjct: 66 -KNNCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKNTKNKNIAVISTKFT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
N S+ ++ ++ + A +E +KE+ ++ + K
Sbjct: 124 ADSHGYKNKAKMLDSELNVKEIACIEFAQMIESGWDTFDN-----RKELLNKYLSEIPKN 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
TD +VL CTHYPLI + + +D + I RA L +N +
Sbjct: 179 TDTLVLGCTHYPLIRKDIEKNI--KIKVVDPAVEIVERATQTLSSLNLLNDKKEKGRIIF 236
Query: 251 FLSGK 255
F++G+
Sbjct: 237 FVTGE 241
>gi|115352286|ref|YP_774125.1| glutamate racemase [Burkholderia ambifaria AMMD]
gi|115282274|gb|ABI87791.1| glutamate racemase [Burkholderia ambifaria AMMD]
Length = 287
Score = 257 bits (659), Expect = 8e-67, Method: Composition-based stats.
Identities = 70/276 (25%), Positives = 112/276 (40%), Gaps = 12/276 (4%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + + P + + +FDSG+GGL VL+ +R +P F+YVAD PYG ++
Sbjct: 1 MTMTHQPAASGARPAGPVGLFDSGLGGLSVLRAVRAHLPGESFVYVADSQHAPYGPRDEA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L + VIACNTA +R S+ +G P IK AAA +
Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+G+ +L+T +TL L+ Y + L +E ++
Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+E D +VL CTHYP R + + +D SD+IAR+ +L
Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLTIVDTSDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
TR +G GL +
Sbjct: 235 LRAPAGTRAAPP-RFCSTGDGRQLHALASTLLGLDA 269
>gi|120597779|ref|YP_962353.1| glutamate racemase [Shewanella sp. W3-18-1]
gi|120557872|gb|ABM23799.1| glutamate racemase [Shewanella sp. W3-18-1]
Length = 270
Score = 257 bits (659), Expect = 9e-67, Method: Composition-based stats.
Identities = 84/252 (33%), Positives = 131/252 (51%), Gaps = 2/252 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T
Sbjct: 61 SSLTQPDIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI ++ ++C + + S L E+ G D + +EI+ F + +
Sbjct: 120 VNSAYVKMLITNFATECKVLVEDSEALVLASEQKLLGNGFDPDIVTQEIQRIFSKPDAFN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TDV+VLACTH+PLI + P V +D+ +IA R LL T + +
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQTCSPILDPEITF 239
Query: 251 FLSGKPDIAMRR 262
+ +G D +
Sbjct: 240 YTTGNVDSEQAK 251
>gi|312113587|ref|YP_004011183.1| glutamate racemase [Rhodomicrobium vannielii ATCC 17100]
gi|311218716|gb|ADP70084.1| glutamate racemase [Rhodomicrobium vannielii ATCC 17100]
Length = 282
Score = 257 bits (659), Expect = 9e-67, Method: Composition-based stats.
Identities = 104/242 (42%), Positives = 141/242 (58%), Gaps = 4/242 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L DSG+GGL VL+ R +PE +++ADD FPYG+ + L +RL+ L L ++
Sbjct: 11 LFLDSGLGGLTVLRAARAAIPEAEVLFIADDAAFPYGSKPEGELVERLLDLVGGALAAFE 70
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P V+ACNTA T+ LR+ F S+ F+G VPAIK AAA T+SGL+S+L+TP T+ R Y
Sbjct: 71 PDCVVLACNTASTVALSALRAAF-SVPFVGTVPAIKPAAAITRSGLVSVLATPGTVAREY 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI Y + LV + LA E+YA G + + I +EI CF+E RTDV+V
Sbjct: 130 THTLIEKYALGARVALVGAANLAELAEDYASGETVSDAAIAREIAPCFVEDADARTDVVV 189
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFDDHALFLS 253
L CTHYPL++ LSPWPV WLD + +IARR +L + F S
Sbjct: 190 LGCTHYPLLLERLDALSPWPVTWLDPAPAIARRIANVLSERGHIVGVGAKRGHGTIAFTS 249
Query: 254 GK 255
G+
Sbjct: 250 GR 251
>gi|313673160|ref|YP_004051271.1| glutamate racemase [Calditerrivibrio nitroreducens DSM 19672]
gi|312939916|gb|ADR19108.1| glutamate racemase [Calditerrivibrio nitroreducens DSM 19672]
Length = 261
Score = 257 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 13/243 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GGL V + + YV D PYGN + K + L ++
Sbjct: 2 SIGVFDSGVGGLTVFKSIADRFKTVDIYYVGDTARVPYGNKSRDTIVKYSLELTEFLVKS 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA + D L++ + ++ +G V P A T++G I ++ T AT+
Sbjct: 62 FAVDLVVVACNTASSYALDFLKNRY-NIPIIGVVEPGCIAAINATKNGKIGVIGTQATIN 120
Query: 134 RTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+N + + ++ +L VEE + + +K+ ++G E
Sbjct: 121 SNSYANTLSALTGGGVRVYQKGCPLLVPLVEEGKIEHPVTKIILKEYLDGIVSE----GI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP++ V + P ++ +D+S +I L +N R LF+
Sbjct: 177 DTLILGCTHYPVLKDVINSIYPE-LNLVDSSVAIIDYIHKLNLDLNEKGLRN-----LFV 230
Query: 253 SGK 255
+ +
Sbjct: 231 TDE 233
>gi|104773633|ref|YP_618613.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|103422714|emb|CAI97341.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
Length = 261
Score = 257 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 6/249 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ + I +FDSG GGL VL ++ LMP +++ D PYG + + +
Sbjct: 2 SKEYVDRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRV 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++
Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TL + + L+ + V + L +E+ + I + +E
Sbjct: 121 TPLTLEQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
GK +VL CTH+P +++ D + A + L +
Sbjct: 177 VGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASQDELNASSQPG 235
Query: 248 HALFLSGKP 256
LF + P
Sbjct: 236 QILFENSAP 244
>gi|52842520|ref|YP_096319.1| glutamate racemase [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|52629631|gb|AAU28372.1| glutamate racemase [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 288
Score = 257 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 10/256 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M +
Sbjct: 18 NSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMA 77
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILS 127
++++ VIACNTA T L+S + L P A + T++ I++L+
Sbjct: 78 KILVERR-IKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLA 136
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ +LI + + + + +L + EE + + +K ++ E
Sbjct: 137 TETTIASRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE- 195
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245
D ++L CTH+P+ + L P V +D++ + A LL N H
Sbjct: 196 -----DAVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNLHNDNLEAP 250
Query: 246 DDHALFLSGKPDIAMR 261
++ + +
Sbjct: 251 PRINYLVTDSINRFQK 266
>gi|317508768|ref|ZP_07966418.1| Asp/Glu/Hydantoin racemase [Segniliparus rugosus ATCC BAA-974]
gi|316252931|gb|EFV12351.1| Asp/Glu/Hydantoin racemase [Segniliparus rugosus ATCC BAA-974]
Length = 287
Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 7/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GGL V + + L+P YVAD PYG ++K + +
Sbjct: 5 KSEAPIGVFDSGVGGLTVARAIAELLPNEEMRYVADSAHQPYGPQSVAQVRKHALAVLDS 64
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++++ + VIACN+A + R +P +PA++ A A T++G I ++ T
Sbjct: 65 LVEEG-VKMLVIACNSASVACLADARERYPVPVVEVVLPAVRSALAATRTGRIGVIGTRI 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + I +E + ++ E
Sbjct: 124 TIASRAYEDSFAAVAPHTRIVSAPCPQFVDFIERGV----VSGPRLEALAREYLAPLEAA 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
DV+VL CTHYPL+ + ++ V + S+ A+ +L + +
Sbjct: 180 DVDVLVLGCTHYPLLAELIGEVMGPGVRLVSPSEETAKDVARILAAEGVSRPGAGAPAPV 239
Query: 251 FLSGKPDIAMRRLMQGFG 268
++ RL Q G
Sbjct: 240 LVTQT--GQSDRLFQWAG 255
>gi|114799484|ref|YP_761669.1| glutamate racemase [Hyphomonas neptunium ATCC 15444]
gi|114739658|gb|ABI77783.1| glutamate racemase [Hyphomonas neptunium ATCC 15444]
Length = 290
Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/263 (33%), Positives = 138/263 (52%), Gaps = 4/263 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ +L+FDSG+GGL V ++R L P Y AD FPYG+ D AL+ RL +
Sbjct: 11 PSPARGRVLVFDSGVGGLTVAAEIRALGPRLSVHYAADTGFFPYGDKSDEALRARLPVVA 70
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+++ +P + VIACNTA TL E+R+ + +G VPAIK AA T++G I +L+T
Sbjct: 71 KALVEAVRPDVFVIACNTASTLALPEVRAVL-DIPVVGTVPAIKPAAKLTETGTIGLLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P T+RR YT+ LI + S + L S+ L E +A G + + F
Sbjct: 130 PGTIRRAYTARLIEEFASGKRVILHGSLDLVKLAEAHARGEDVPPEAFAAAQAPLFTAPG 189
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G + D IVLACTH+PL+ +P V ++D+ +IAR+ +LP N ++
Sbjct: 190 GDQIDTIVLACTHFPLVRGQLIATAPHAVSYIDSGAAIARQTIRVLPARN--ESGGQGGT 247
Query: 249 ALFLS-GKPDIAMRRLMQGFGLK 270
A S + + + R+++ +G
Sbjct: 248 ACLTSPPEREEGITRVLRRYGFP 270
>gi|325684586|gb|EGD26745.1| glutamate racemase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 261
Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 6/249 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ I +FDSG GGL VL ++ LMP +++ D PYG + + +
Sbjct: 2 SKEYADRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRV 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++
Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TL + + L+ + V + L +E+ + I + +E
Sbjct: 121 TPLTLEQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
GK +VL CTH+P +++ D + A + L +
Sbjct: 177 VGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPG 235
Query: 248 HALFLSGKP 256
LF + P
Sbjct: 236 QILFENSAP 244
>gi|294500374|ref|YP_003564074.1| glutamate racemase [Bacillus megaterium QM B1551]
gi|294350311|gb|ADE70640.1| glutamate racemase [Bacillus megaterium QM B1551]
Length = 266
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 8/242 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL + P+ F+Y AD PYG + K + DIL +
Sbjct: 3 IGFFDSGIGGISVLNEAIKHFPKEDFLYYADTRNVPYGTRTKEEVNKHVQTAVEDILKQE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133
L VIACNTA ++ +ELRST+ + +G PA K A + S + + +T TL+
Sbjct: 63 VKAL-VIACNTATSISINELRSTY-DIPIIGMEPAAKPAIELSSSMDKRVLVFATDLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
LI + + L E + D++ + +
Sbjct: 121 ELKYKKLITRIDKDSIVDPLPLPELVEFCE----DLNFNWDKLSTYFRTKLEGFDLNQYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+P V + L P + +D S R LL + T +D + S
Sbjct: 177 TVVLGCTHFPYYKPVLKDLLPSHIQLIDGSKGTVERLSSLLEEKSLLSTNGTNDISFQCS 236
Query: 254 GK 255
Sbjct: 237 SN 238
>gi|116513625|ref|YP_812531.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116092940|gb|ABJ58093.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
Length = 261
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 6/249 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ I +FDSG GGL VL ++ LMP +++ D PYG + + +
Sbjct: 2 SKEYADRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRV 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++
Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TL + + L+ + V + L +E+ + I + +E
Sbjct: 121 TPLTLEQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
GK +VL CTH+P +++ D + A + L +
Sbjct: 177 VGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNAGSQPG 235
Query: 248 HALFLSGKP 256
LF + P
Sbjct: 236 QILFENSAP 244
>gi|89256134|ref|YP_513496.1| glutamate racemase [Francisella tularensis subsp. holarctica LVS]
gi|115314607|ref|YP_763330.1| glutamate racemase [Francisella tularensis subsp. holarctica OSU18]
gi|156502156|ref|YP_001428221.1| glutamate racemase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|167009837|ref|ZP_02274768.1| glutamate racemase [Francisella tularensis subsp. holarctica
FSC200]
gi|290953270|ref|ZP_06557891.1| glutamate racemase [Francisella tularensis subsp. holarctica URFT1]
gi|295313512|ref|ZP_06804107.1| glutamate racemase [Francisella tularensis subsp. holarctica URFT1]
gi|89143965|emb|CAJ79186.1| glutamate racemase [Francisella tularensis subsp. holarctica LVS]
gi|115129506|gb|ABI82693.1| glutamate racemase [Francisella tularensis subsp. holarctica OSU18]
gi|156252759|gb|ABU61265.1| glutamate racemase [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 265
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K + ++
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAVQTAKFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D+ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 64 DQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE I E K+ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSY----FHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QTLILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKP 256
++ P
Sbjct: 235 VTDIP 239
>gi|94969536|ref|YP_591584.1| glutamate racemase [Candidatus Koribacter versatilis Ellin345]
gi|166231022|sp|Q1INP0|MURI_ACIBL RecName: Full=Glutamate racemase
gi|94551586|gb|ABF41510.1| glutamate racemase [Candidatus Koribacter versatilis Ellin345]
Length = 291
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 27/281 (9%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + I +FDSG GGL VL+++ L+P ++Y D PYG + + +
Sbjct: 1 MSRQRPVIGVFDSGFGGLTVLREIVRLVPNAEYLYFGDTARLPYGTKSADTVARYALGAC 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L+ VIACNTA L D + + A P AAA +++ ++++ T
Sbjct: 61 H-FLEGQGAEHLVIACNTATALAMDAIEAKANVPAIGVVEPGASAAAAISKTRSVAVIGT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + + ++ +L VEE + + + ++ F+ +
Sbjct: 120 EATISSHAYHHALERL--GINAYEKATPLLVPLVEEGWTDHPVTKQVAEIYLQDAFV-RR 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-------------- 234
+R+DV+VL CTHYPLI + R++ P V +D+++S A+ L
Sbjct: 177 EQRSDVLVLGCTHYPLIRPLLRKVVPSDVAIVDSAESTAKALAKKLGIAPPSASAAGATQ 236
Query: 235 --------PRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
D F++ RRL GF
Sbjct: 237 AAGARAQMAPSAPEPKEGTPDFRFFVTDSVQKF-RRLGSGF 276
>gi|150018421|ref|YP_001310675.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
gi|149904886|gb|ABR35719.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
Length = 267
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 9/241 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL ++P +IY AD PYG +KK ++ I+++
Sbjct: 3 IGFFDSGIGGITVLYDTLKVLPNEDYIYYADTSNVPYGPKPKDEVKKYILNAIDFIVEQG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
VIACNTA ++ + LRS + S+ +G PA+K A + + + + +T TL+
Sbjct: 63 -VKAVVIACNTATSVAIEALRSKY-SIPIIGMEPAVKPAIEKNKDMNKRVLVTATALTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NLI+ ++ + L+ L E ++ E + ++ + + +
Sbjct: 121 EEKLHNLIYKLDNEHVVDLLPLPGLVQFSER----LEFDEQIVLPYLKEELFKFDLNNYE 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+ + R+L P V +D + A+ + +L +N + + S
Sbjct: 177 AIVLGCTHFSYYKDMVRKLVPSNVSIIDGNIGTAKNLKRILKEMNLLN-EGHGNITFYNS 235
Query: 254 G 254
G
Sbjct: 236 G 236
>gi|294791442|ref|ZP_06756599.1| glutamate racemase [Scardovia inopinata F0304]
gi|294457913|gb|EFG26267.1| glutamate racemase [Scardovia inopinata F0304]
Length = 263
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 7/236 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG+ V++++R +P ++ D PYG +K+ + +L
Sbjct: 3 NAPIGVFDSGMGGISVVRQIRQDLPHEDILFYGDSAHAPYGTKPTEQVKELSFAVTRHLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPA 130
+ VIACNTA + +LRS+ S+ +G PA+K A + + +L+T
Sbjct: 63 SRG-VKAIVIACNTATSAAAPDLRSSL-SLPVIGMEPALKVACDRGEGKPQNVLVLATSL 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ IH + L S VE G D K I +
Sbjct: 121 TLREKKFARLVEQVRGNNTIHTQACPDLVSLVES---GKVEDRDLAIKTITSYLKPYDLN 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D +VL CTH+ + FRQ+ P V +D + + R +L R +
Sbjct: 178 SLDSVVLGCTHFIFYRNYFRQILPDSVAIIDGNAGTSHHVRTILEESGNLADRPDN 233
>gi|256847951|ref|ZP_05553395.1| glutamate racemase [Lactobacillus coleohominis 101-4-CHN]
gi|256715011|gb|EEU29988.1| glutamate racemase [Lactobacillus coleohominis 101-4-CHN]
Length = 267
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 108/267 (40%), Gaps = 17/267 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V++ +R +P ++V D FPYG + +
Sbjct: 1 MDNRP--------IGVMDSGLGGLSVIRIIREQLPNESIVFVGDQGHFPYGVRTQENVCQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + ++ Y + +IACNTA L+ P + +G + P + A A +
Sbjct: 53 LALNIGRYLMT-YDIKMMIIACNTATAASLPTLQKELP-IPVIGVIKPGAEAALAQPKHA 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I + +T T++ IH + ++ + S VE G ++ + ++
Sbjct: 111 RIGVTATEGTIKAGAYPKTIHELNPDVTVIPKAAQPMVSVVEHNEVGTPKAQEVVNEQ-- 168
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH- 240
+ + DV+VL CTH+P + L P V +D + + A+ +L +
Sbjct: 169 --LAIFKKQPVDVLVLGCTHFPFLAKEISNLLP-DVKLVDPALETVKTAKQMLTEADQLT 225
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ L+ +G +
Sbjct: 226 SSDQPGTMKLYSTGDFQELQTGAEKWL 252
>gi|83312678|ref|YP_422942.1| glutamate racemase [Magnetospirillum magneticum AMB-1]
gi|82947519|dbj|BAE52383.1| Glutamate racemase [Magnetospirillum magneticum AMB-1]
Length = 273
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 4/248 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P IY+ D PYG + + ++
Sbjct: 8 PIGIFDSGVGGLTVLKAVRERLPGESLIYLGDTARLPYGTKSAQTVAAYALEATRRLVS- 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
Y ++A NT+ + LR+ FP + +G V P AAA + G I++++T + ++
Sbjct: 67 YGIKALLVADNTSSAHALEGLRAAFPGLPVIGVVEPGATAAAAASARGRIAVIATESAVQ 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + S VEE I E + ++ F + D
Sbjct: 127 AGTYPRAILHSRPNAQVTQLPCPLFVSMVEEGLVDGPIAEQIARHYLDPLFSGPDAA--D 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTH+P + +FR+L V +D++ + A LL +
Sbjct: 185 CLLLGCTHFPALAPLFRRLLGRDVAVVDSASTTAMVLEDLLSLRGLRAPGGTARVRYLAT 244
Query: 254 GKPDIAMR 261
P+ R
Sbjct: 245 DAPERFAR 252
>gi|54298200|ref|YP_124569.1| hypothetical protein lpp2258 [Legionella pneumophila str. Paris]
gi|53751985|emb|CAH13411.1| hypothetical protein lpp2258 [Legionella pneumophila str. Paris]
gi|307611149|emb|CBX00793.1| hypothetical protein LPW_24971 [Legionella pneumophila 130b]
Length = 279
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 10/256 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M +
Sbjct: 9 NSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMA 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILS 127
++++ VIACNTA T L+S + L P A + T++ I++L+
Sbjct: 69 KILVERR-IKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ +LI + + + + +L + EE + + +K ++ E
Sbjct: 128 TETTIASRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245
D ++L CTH+P+ + L P V +D++ + A LL N H V
Sbjct: 187 -----DAVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNLHNDNLEVP 241
Query: 246 DDHALFLSGKPDIAMR 261
++ + +
Sbjct: 242 PRINYLVTDSINRFQK 257
>gi|239905425|ref|YP_002952164.1| glutamate racemase [Desulfovibrio magneticus RS-1]
gi|239795289|dbj|BAH74278.1| glutamate racemase [Desulfovibrio magneticus RS-1]
Length = 270
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 95/257 (36%), Gaps = 6/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL V + + L+P +Y D PYG + + + +L
Sbjct: 5 NSPIGIFDSGVGGLTVARAVMELLPNEPVVYFGDTARVPYGVKSPDTVARYAAQITRFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K L ++ACNT + + + P A A T++ I I++TP+T+
Sbjct: 65 EK-NVKLLIVACNTMAAVALPAITNIAPVPVLEVIDAGAASALAATRTRRIGIIATPSTV 123
Query: 133 RRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ H + + EE + +
Sbjct: 124 ASQAYEQALARLGGPDVHTVAKACPLFVPLAEEGLT----DHPATRLIAAEYLTPLAAEN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V D++ ++ARRA +L H+
Sbjct: 180 LDTLILGCTHYPLLAPLLADVVGPSVRLQDSATAVARRAAAILDEKGLRHAGPSPRHSFH 239
Query: 252 LSGKPDIAMRRLMQGFG 268
++ P + G
Sbjct: 240 VTDMPHRFQAIGQRFLG 256
>gi|283853806|ref|ZP_06371029.1| glutamate racemase [Desulfovibrio sp. FW1012B]
gi|283570810|gb|EFC18847.1| glutamate racemase [Desulfovibrio sp. FW1012B]
Length = 268
Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 98/255 (38%), Gaps = 6/255 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P +Y D PYG + + + +L K
Sbjct: 8 PIGIFDSGVGGLTVARAVMDRLPHESIVYFGDTARVPYGVKSPDTVARYAAQITRFLLAK 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L ++ACNT + + + P + A A T++ I I++TP+T+
Sbjct: 68 -DVKLLIVACNTMAAVALPAITALSPVPVIEVIDAGARSALAATRTKRIGIIATPSTIAS 126
Query: 135 TYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + H + + VEE + + E D
Sbjct: 127 RAYERALTTLGGPGVHTASRACPLFVPLVEEGW----LDHPATRLVAEEYLAPLLAYDLD 182
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYPL+ + ++ + D++ ++A RA LL + Q HA ++
Sbjct: 183 TLILGCTHYPLLAPLLARVVGPGIRLQDSASAVAERAAALLAELGLGQADGRPGHAFHVT 242
Query: 254 GKPDIAMRRLMQGFG 268
P + G
Sbjct: 243 DMPLKFREIGERFLG 257
>gi|328953591|ref|YP_004370925.1| Glutamate racemase [Desulfobacca acetoxidans DSM 11109]
gi|328453915|gb|AEB09744.1| Glutamate racemase [Desulfobacca acetoxidans DSM 11109]
Length = 267
Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 12/259 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL++ +P+Y ++Y+ D+ PYG D + K + +
Sbjct: 2 IGVFDSGFGGLAVLREFLQALPDYDYLYLGDNARIPYGTRSDQVVLKFTRQAVDYLF-RQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRS-----TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTP 129
+L ++AC+TA + ++ +P+ LG +P +++A + T SG I I+ T
Sbjct: 61 GCILIILACHTASSKALRTIQQYYLPVHYPNNRVLGVVIPTVEEALSRTVSGRIGIIGTE 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ +H + + +L +E ++ + + K E
Sbjct: 121 GTVASNSFPIELHKLNPGVQVFQQACPLLVPIIEAGEQDGEVADLMLNK----YLGPFEA 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
R D ++L CTHY ++ + L + + + + A + L R R+
Sbjct: 177 HRIDTLILGCTHYSILKTKIKNLLGQKIQIICSGEVTAVKLADYLRRHPEINQRLSRTGQ 236
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+L+ + L F
Sbjct: 237 RHYLTTDLTPRFQDLASLF 255
>gi|218280883|ref|ZP_03487507.1| hypothetical protein EUBIFOR_00065 [Eubacterium biforme DSM 3989]
gi|218217817|gb|EEC91355.1| hypothetical protein EUBIFOR_00065 [Eubacterium biforme DSM 3989]
Length = 258
Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 6/231 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+N I +FDSG+GG+ VL M L+P + IY+ D PYG + KR + + +
Sbjct: 2 NSKNPIGVFDSGLGGISVLHTMHSLLPNENLIYLGDSKYNPYGTKTKEEITKRCIAICDE 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ K VIACNTA + LR + + +G PA+K A + I++ +T
Sbjct: 62 FI-KQDVKAIVIACNTATSACVKLLREKY-DVDIIGMEPALKVACDRGNNQRIAVWATEL 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL +NL+ + + HI V L VE+ + ++ ++ + K
Sbjct: 120 TLSEKKFANLMDRFKDEHHIVKVPCPKLVRMVED---DKLDDTNLVESVLKEYLAACDYK 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
D IVL CTH+P +L P + ++ S + LL +
Sbjct: 177 NLDSIVLGCTHFPFYTKYLERLCP-NIHIIEGSVGTTLHTKDLLEQKGLLN 226
>gi|149186762|ref|ZP_01865073.1| Glutamate racemase [Erythrobacter sp. SD-21]
gi|148829670|gb|EDL48110.1| Glutamate racemase [Erythrobacter sp. SD-21]
Length = 264
Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 119/225 (52%), Gaps = 1/225 (0%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ IL+FDSG+GGL VL ++R LMP+ IY AD G PYG + + R+ L
Sbjct: 2 NSSSPILLFDSGVGGLTVLAELRQLMPKAPVIYAADMAGLPYGTKTEAEVAARVAGLLGR 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ ++Y P L IACNTA T+ +R + +G VPAIK AAA T++G I +L T A
Sbjct: 62 MAERYNPRLICIACNTASTIALGMVREVLET-PIVGTVPAIKPAAALTKTGTIGLLGTQA 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R+ Y +L + S + + L + E G + DE+ K G ++ G+
Sbjct: 121 TVRQGYVDDLEREFASDKTLLRYGANDLVALGEHKLRGESVSVDEVAKAARGLVLQVGGE 180
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
D +VLACTH+PL+ R+ V ++ + IARR LL
Sbjct: 181 DLDTVVLACTHFPLLEPELREAFGKHVTFVHGAQGIARRIAHLLE 225
>gi|310659702|ref|YP_003937423.1| glutamate racemase [Clostridium sticklandii DSM 519]
gi|308826480|emb|CBH22518.1| glutamate racemase [Clostridium sticklandii]
Length = 274
Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 13/256 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MK+ N K+ + I FDSGIGGL VL K +MP +IY AD PYG +
Sbjct: 1 MKMSN----KEERYKIGFFDSGIGGLTVLHKALEMMPLEDYIYYADTENQPYGIKTKAEV 56
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-- 118
++ + I+ K V+ACNTA ++ ++LR + + +G PA+K A YT
Sbjct: 57 RELVFKAMDFIVSK-NVKAIVVACNTATSVAIEDLRKKY-DIPIIGMEPAVKPAVRYTDI 114
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + + +T TL+ NLI + S+ + L+ L E + E I K
Sbjct: 115 ENKKVLVTATKLTLKEEKLHNLISALDSESIVDLLELQELVQFAER----LDFDETRITK 170
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+E F E + K +VL CTH+ + ++L + +D ++ R + +L
Sbjct: 171 YLENQFKEIDLKDYQTLVLGCTHFIFFKDMIQKLVTKEISIIDGNEGTIRHLQNILRTKK 230
Query: 239 THQTRVFDDHALFLSG 254
+ + + SG
Sbjct: 231 SLN-QGSGKVEFYNSG 245
>gi|308068806|ref|YP_003870411.1| glutamate racemase [Paenibacillus polymyxa E681]
gi|305858085|gb|ADM69873.1| Glutamate racemase [Paenibacillus polymyxa E681]
Length = 267
Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 13/251 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL + +P +F+Y+AD + PYG + + IL K
Sbjct: 3 IGFFDSGLGGITVLSEALRRLPNENFVYMADTLHVPYGTKTPQEVLGYVKASVETIL-KE 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
VIACNTA ++ ELR +P + +G PA+K A + + +L+TP TL+
Sbjct: 62 DVKALVIACNTATSIAVAELRKEYP-IPIIGMEPAVKPAVEMNRANGKRVLVLATPLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
++ + L+ + + L E+ + E+ +
Sbjct: 121 QSCYAALVSRVDDHGSVDSLPLPELVQYCEQ----LNFDRAEMSEYFNRELSSFNLDIYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-----RVFDDH 248
+VL CTHYP + R+L P + +D S RR + +L N ++ + H
Sbjct: 177 TVVLGCTHYPFYKEILRELLPSHIQLIDGSQGTVRRLKQVLSERNLLESLPKYGPSQEGH 236
Query: 249 ALFLSGKPDIA 259
FL D A
Sbjct: 237 ITFLCSSQDEA 247
>gi|332678480|gb|AEE87609.1| Glutamate racemase [Francisella cf. novicida Fx1]
Length = 265
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K ++
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 64 EQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE +I E K+ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGEIVELVAKEYLSY----FHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
+VL CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALVLGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKP 256
++ P
Sbjct: 235 VTDIP 239
>gi|171322906|ref|ZP_02911602.1| glutamate racemase [Burkholderia ambifaria MEX-5]
gi|171091727|gb|EDT37266.1| glutamate racemase [Burkholderia ambifaria MEX-5]
Length = 287
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 73/269 (27%), Positives = 113/269 (42%), Gaps = 13/269 (4%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + + P + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++
Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSHHAPYGPRDEA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L + VIACNTA +R S+ +G P IK AAA +
Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+G+ +L+T +TL L+ Y + L +E ++
Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+E D +VL CTHYP R L + +D SD+IAR+ +L
Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDLVGDRLTIVDTSDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLM 264
TR F S + +R L
Sbjct: 235 QRAPAGTRAAPPR--FCSTSDGLQLRALA 261
>gi|170703387|ref|ZP_02894167.1| glutamate racemase [Burkholderia ambifaria IOP40-10]
gi|170131707|gb|EDT00255.1| glutamate racemase [Burkholderia ambifaria IOP40-10]
Length = 287
Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 71/276 (25%), Positives = 112/276 (40%), Gaps = 12/276 (4%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + + P + + IFDSG+GGL VL+ +R +P F+YVAD PYG ++
Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSHHAPYGPRDEA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L + VIACNTA +R S+ +G P IK AAA +
Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+G+ +L+T +TL L+ Y + L +E ++
Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+E D +VL CTHYP R + + +D SD+IAR+ +L
Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLMIVDTSDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
TR +G GL +
Sbjct: 235 LRAPAGTRAAPP-RFCSTGDGRQLHALASTLLGLDA 269
>gi|254374574|ref|ZP_04990055.1| glutamate racemase [Francisella novicida GA99-3548]
gi|151572293|gb|EDN37947.1| glutamate racemase [Francisella novicida GA99-3548]
Length = 265
Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K ++
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 64 EQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE +I E K+ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVELVAKEYLSY----FHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
+VL CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALVLGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKP 256
++ P
Sbjct: 235 VTDIP 239
>gi|300814837|ref|ZP_07095071.1| glutamate racemase [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511033|gb|EFK38299.1| glutamate racemase [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 270
Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN SI FDSG+GGL VL+ +P +IY D + PYG +++
Sbjct: 1 MDNR--------SIGFFDSGVGGLSVLKVSLGEIPRESYIYYGDTLRMPYGVRSKEDIER 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
K ++VIACNTA + R F F PA+K++ ++S
Sbjct: 53 YTCQAMEFFRSK-NVKMAVIACNTATCYGIKKARELFDFPIFGVVEPAVKESLHKSKSKK 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+++L+T T+ SY S +I + L +E ++++ I I
Sbjct: 112 VALLATEGTVNSGVYDKFFESYSSNIYIKEIGCPDLVLAIENG----DLRDEVIVPVINK 167
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLLPRINT 239
+ E D ++L CTH+P++ + F+++ V +D ++ + L +
Sbjct: 168 YLDKFEDFEYDTLILGCTHFPIVENTFKRILAKFDRKVQLVDPAEITINELKEYLENHDM 227
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQ 265
+ ++S + L +
Sbjct: 228 LGDHDEESIDFYVSSHKEKFKSTLEK 253
>gi|310642114|ref|YP_003946872.1| glutamate racemase 2 [Paenibacillus polymyxa SC2]
gi|309247064|gb|ADO56631.1| Glutamate racemase 2 [Paenibacillus polymyxa SC2]
Length = 262
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 9/241 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL ++P ++Y AD + PYG+ +KK ++ + + +
Sbjct: 3 IGFFDSGIGGITVLHDTLKVLPNEDYMYYADTLNVPYGHKTKDEVKKYVLNAI-EFISQQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133
+ VIACNTA + +E+R + S+ +G PA+K A ++ + + +T TLR
Sbjct: 62 KVKAIVIACNTATSAAIEEIRGKY-SIPIIGMEPAVKPAVKSKKNIDKRVLVTATALTLR 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NLI ++ + L+ L E + + E + ++ + + +
Sbjct: 121 EERLQNLITKLDNEHVVDLLPLPKLVQFAESF----EFNEQIVLPYLQEQLSIYDLSKYE 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+ +FR+L V+ +D ++ A+ + +L +N+ + + + S
Sbjct: 177 TIVLGCTHFSYYKDIFRKLFSSDVNIIDGNNGTAKNLKKVLEEMNSL-DEGNGNISFYCS 235
Query: 254 G 254
G
Sbjct: 236 G 236
>gi|124515180|gb|EAY56691.1| Glutamate racemase [Leptospirillum rubarum]
Length = 314
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 7/262 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E++ + I +FDSG+GGL VL+ P+ F Y+ D FPYG + +
Sbjct: 5 ERRPEGGIALFDSGVGGLTVLRHFWETFPDRDFAYLGDMARFPYGTKSRETILRFARENV 64
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILS 127
L P L V AC T + + EL FP + +G + A + A T++G + +L+
Sbjct: 65 L-FLRTLHPSLIVAACFTVSSQVLPELSREFPDVPIVGMLEAGARAACRLTRTGSVGVLA 123
Query: 128 TPATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ +I ++ + + A VEE I E +K +E
Sbjct: 124 TEGTISSQAYPAVIGEMTAHSVRVYGQACPLFAPMVEEGVTEGPIAELVARKYLEPFL-- 181
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D I+L CTHYP + + P + ++D +A + + N
Sbjct: 182 NVYREVDTIILGCTHYPPLRRTLEAILP-DIVFVDPGQELAEELKK-AGKTNGSSGNPLP 239
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+ +++ P+ +R G
Sbjct: 240 ERHFYVTDSPERFVRIGENLLG 261
>gi|206603690|gb|EDZ40170.1| Glutamate racemase [Leptospirillum sp. Group II '5-way CG']
Length = 314
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 7/263 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E + + I +FDSG+GGL VL+ P+ F Y+ D FPYG + +
Sbjct: 4 AEPRSKGGIALFDSGVGGLTVLRHFWETFPDRDFAYLGDMARFPYGTKSRETILRFAREN 63
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISIL 126
+ + P L V AC T + + EL FP + +G + A + A T++G + +L
Sbjct: 64 VLFLQTLH-PSLIVAACFTVSSQVLPELSREFPDVPIVGVLEAGARAACRLTRTGSVGVL 122
Query: 127 STPATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+T T+ +I ++ + + A VEE I E +K +E
Sbjct: 123 ATEGTISSQAYPAVIGEMTAHAVRVYGQACPLFAPMVEEGVTEGPIAELVARKYLEPFLS 182
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D I+L CTHYP + + P V ++D +A + + N +
Sbjct: 183 VY--REVDTIILGCTHYPPLRRTMEAILP-DVVFVDPGQELAEELKK-AGKTNGYSGNAL 238
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
+ +++ P +R G
Sbjct: 239 PERRFYVTDSPKRFVRIGENLLG 261
>gi|19704496|ref|NP_604058.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|296328142|ref|ZP_06870673.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|22001821|sp|Q8REE6|MURI_FUSNN RecName: Full=Glutamate racemase
gi|19714772|gb|AAL95357.1| Glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|296154654|gb|EFG95440.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 264
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 12/245 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I IFDSG+GG VL+++ +P +IY D+ FPYG+ + L+K + +
Sbjct: 6 QRIGIFDSGLGGTTVLKELINSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
K L ++ACNTA T D LR F S+ +G + A +K A+ T++ I+++ST T
Sbjct: 66 -KNNCKLVIVACNTASTAAIDYLREKF-SLPIIGIIEAGVKIASKNTKNKNIAVISTKFT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
N S+ ++ ++ + A +E +KE+ ++ + K
Sbjct: 124 AESHGYKNKAKMLDSELNVKEIACIEFAQMIETGWDTFDN-----RKELLNKYLSEIPKN 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTHYPLI + + +D + I R L +N +
Sbjct: 179 ADTLVLGCTHYPLIREDIEKNI--KIKVVDPAVEIVERTIQTLTSLNLLNDKKERGRIIF 236
Query: 251 FLSGK 255
F++G+
Sbjct: 237 FVTGE 241
>gi|85715176|ref|ZP_01046160.1| glutamate racemase [Nitrobacter sp. Nb-311A]
gi|85698091|gb|EAQ35964.1| glutamate racemase [Nitrobacter sp. Nb-311A]
Length = 280
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 99/269 (36%), Positives = 147/269 (54%), Gaps = 12/269 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ N P +IL+ DSG+GGL VL+K+ +P ++YVADD FPYG + +
Sbjct: 1 MSNTP-------TILVVDSGLGGLTVLRKIVDALPAARYVYVADDAFFPYGRLSEEEIIA 53
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R++ L +++ + P + VIACNT + LR+ + S+ F+G VPAIK A A +++
Sbjct: 54 RVVPLVGELIGAHAPDIVVIACNTMSVSVLGPLRAAY-SIPFVGTVPAIKPACAASKTKR 112
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+S+L T AT++R YT LI + C + LV + LAS E+ G + + +I EI
Sbjct: 113 VSVLGTRATVQREYTQALIRDHAQACTVTLVGAASLASLAEDALRGKTVSDADILSEIAP 172
Query: 183 CFIEKEGKR---TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
CF+ TD +VLACTHYPL++ +L+PWPV W+D + +IARR LL
Sbjct: 173 CFVSAVDGGDLRTDAVVLACTHYPLLLDRLLKLAPWPVSWIDPAPAIARRVVDLLGSG-G 231
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
R +F SG+P L FG
Sbjct: 232 GGDREAPPEMIFTSGRPHGLTDALAPFFG 260
>gi|208779829|ref|ZP_03247173.1| glutamate racemase [Francisella novicida FTG]
gi|254373122|ref|ZP_04988611.1| glutamate racemase [Francisella tularensis subsp. novicida
GA99-3549]
gi|151570849|gb|EDN36503.1| glutamate racemase [Francisella novicida GA99-3549]
gi|208744284|gb|EDZ90584.1| glutamate racemase [Francisella novicida FTG]
Length = 265
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K ++
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 64 EQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE +I E K+ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVELVAKEYLSY----FHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKP 256
++ P
Sbjct: 235 VTDIP 239
>gi|92117194|ref|YP_576923.1| glutamate racemase [Nitrobacter hamburgensis X14]
gi|91800088|gb|ABE62463.1| glutamate racemase [Nitrobacter hamburgensis X14]
Length = 265
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 98/258 (37%), Positives = 146/258 (56%), Gaps = 5/258 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+ DSG+GGL VL+++ +P ++YVADD FPYG+ + + R++ L +++D
Sbjct: 5 PTILVLDSGLGGLTVLREIVKALPGARYVYVADDAFFPYGHHSEDEIIARVVPLVGELID 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P L+VIACNT + LR+ + S+ F+G VPAIK A A +++ +S+L T AT++
Sbjct: 65 TYTPDLAVIACNTMSVSVLGPLRAAY-SVPFVGTVPAIKPACAASKTKRVSVLGTRATVQ 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR-- 191
R YT LI + C + LV + LA E+ G + + +I EI CF+
Sbjct: 124 REYTQALIRDHARACTVTLVGAAHLARLAEDALRGKPVSDADIVSEIAPCFVPAADGGAL 183
Query: 192 -TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
TD +VLACTHYPL++ +L+PWPV W+D + +IARR LL R F +
Sbjct: 184 RTDAVVLACTHYPLLLDRLLRLAPWPVAWIDPAPAIARRVVDLLG-PGDSGGREFPPEMI 242
Query: 251 FLSGKPDIAMRRLMQGFG 268
F SG+ L FG
Sbjct: 243 FTSGRSRTLTDALAPFFG 260
>gi|284047416|ref|YP_003397755.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
gi|283951637|gb|ADB46440.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
Length = 264
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 98/251 (39%), Gaps = 6/251 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSG+GGL VL+ ++ MP FI++ D PYGN ++ + + L++
Sbjct: 6 PIGVIDSGVGGLTVLKWLQEKMPHERFIFIGDTARTPYGNRSREEIQGFVGE-MTAWLNR 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNT L D +++ + + +G T++ + L+T T+
Sbjct: 65 RNIKQLVVACNTITVLGTDVIKNGY-DFSVIGMKKGAHMVEGVTRNKKVGFLATDFTVAS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I + + +E G + E+ I+ + + D
Sbjct: 124 GAHKKEIQEMDPEIQVFGQGCPKFVPLIE----GEQFGSPELAAAIKEYTDKLKEYDVDT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L+CTHYP + R+ V LD ++ + A L + ++ + +
Sbjct: 180 VMLSCTHYPFVEKEIREAFGPGVTILDPAERTVQAAMEDLKQRRLNRETGLGRAEVCFTA 239
Query: 255 KPDIAMRRLMQ 265
+ R +
Sbjct: 240 DLERGKRLAAR 250
>gi|256372517|ref|YP_003110341.1| glutamate racemase [Acidimicrobium ferrooxidans DSM 10331]
gi|256009101|gb|ACU54668.1| glutamate racemase [Acidimicrobium ferrooxidans DSM 10331]
Length = 276
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 54/253 (21%), Positives = 98/253 (38%), Gaps = 10/253 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ I +FDSG GGL +L +R L+P +Y D PYG+ + + + +
Sbjct: 2 AAERAHGPIGVFDSGFGGLNILAALRDLLPSEDLVYFGDSARSPYGSRPADEVVRFSLEI 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISIL 126
++D+ L V+ CNTA + D LR+ ++ +G V A +AA SG + ++
Sbjct: 62 GRWLVDEAGSKLVVVGCNTASAVALDALRAEL-AVPVIGVVGAGARAARRCVGSGRVGVI 120
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + V+ L VE + ++ I
Sbjct: 121 GTERTIASGAYQRALADDAGVA----VACPGLVEFVEAG----QTTGPAVRAVIADRLAP 172
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTHYP + + + V + ++ A L ++
Sbjct: 173 VVDAGVEVLLLGCTHYPYLAREIQAVVGEQVTLVSPAEEAAFEVAQRLGADGLARSGAVG 232
Query: 247 DHALFLSGKPDIA 259
+ SG P +
Sbjct: 233 SLRVACSGDPVVF 245
>gi|146294088|ref|YP_001184512.1| glutamate racemase [Shewanella putrefaciens CN-32]
gi|145565778|gb|ABP76713.1| glutamate racemase [Shewanella putrefaciens CN-32]
Length = 270
Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats.
Identities = 83/252 (32%), Positives = 131/252 (51%), Gaps = 2/252 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T
Sbjct: 61 SSLTQPDIIVIACNTASTIALDLLRTEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI ++ ++C + + S +L E+ G D + +EI+ F + +
Sbjct: 120 VNSAYVKMLITNFATECKVLVEDSEVLVLASEQKLLGNGFDPDIVTQEIQRIFSKPDAFN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TDV+VLACTH+PLI + P V +D+ +IA R LL + +
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQACSPILDPEITF 239
Query: 251 FLSGKPDIAMRR 262
+ +G D +
Sbjct: 240 YTTGNVDSEQAK 251
>gi|120610174|ref|YP_969852.1| glutamate racemase [Acidovorax citrulli AAC00-1]
gi|120588638|gb|ABM32078.1| glutamate racemase [Acidovorax citrulli AAC00-1]
Length = 296
Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 104/270 (38%), Gaps = 11/270 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ +R +P F+Y+AD PYG D + R + +
Sbjct: 6 QRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGNAPYGERGDAYVAARTHAIAGYLQ 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA E+R+ + +G PA+K A + T++G + ++ T TL
Sbjct: 66 RTHGIKALVVACNTATAAAIHEVRARHADLPLVGVEPALKPALSLTRTGRVGVIGTRGTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEK-- 187
L S + LA +E + EI+
Sbjct: 126 SSAKFQRLRASLQGPVEFVVQPCDGLAHAIERSTADTLPDDPATAEIRALCARYMAALGP 185
Query: 188 ---EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
D +VL CTHY R + V ++ + +AR+ R LL
Sbjct: 186 FGAAPGEIDTLVLGCTHYLFAEDALRAHTGPQVRLVETGEPVARQTRRLLEAAGALAAAT 245
Query: 245 FD---DHALFLSGKPDIAMRRLMQGFGLKS 271
+LF +G + + L +
Sbjct: 246 VPATGTTSLFTTGALPLLQAAAHRWLQLPA 275
>gi|313904511|ref|ZP_07837887.1| glutamate racemase [Eubacterium cellulosolvens 6]
gi|313470653|gb|EFR65979.1| glutamate racemase [Eubacterium cellulosolvens 6]
Length = 269
Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 8/238 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K ++ I +FDSG+GGL VL+++ +PE F+Y D PYG E +++ M +
Sbjct: 9 KYKDYIGVFDSGVGGLSVLKELVKELPEEDFLYFGDSANAPYGEKEIGTIRELSMKIADR 68
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ VIACNTA + E+R+ + M +G PA+K AA + + G I +++TP
Sbjct: 69 MVA-DGVKTIVIACNTATSAAVKEIRAKYQERMPIIGIEPALKPAARWKRHGRILVMATP 127
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
ATL+ +L H + V LASRVE+ + + +++ +
Sbjct: 128 ATLKLEKYEDLSHRLEGEAEFIPVMCTGLASRVEKGKLEEEDLHELLEELLGPY-----R 182
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D IVL CTHYP + R + + D + A L + + + D
Sbjct: 183 GKVDGIVLGCTHYPFVKKQIRSVMG-DIPMFDGGEGTAHELHRQLEKHGLLKKKESGD 239
>gi|118497764|ref|YP_898814.1| glutamate racemase [Francisella tularensis subsp. novicida U112]
gi|194323736|ref|ZP_03057512.1| glutamate racemase [Francisella tularensis subsp. novicida FTE]
gi|118423670|gb|ABK90060.1| glutamate racemase [Francisella novicida U112]
gi|194322100|gb|EDX19582.1| glutamate racemase [Francisella tularensis subsp. novicida FTE]
Length = 265
Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K ++
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 64 EQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE +I E K+ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVELVAKEYLSY----FHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYKFY 234
Query: 252 LSGKP 256
++ P
Sbjct: 235 VTDIP 239
>gi|313123221|ref|YP_004033480.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312279784|gb|ADQ60503.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 261
Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 6/249 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ I +FDSG GGL VL ++ LMP +++ D PYG + + +
Sbjct: 2 SKEYADRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKKEVYQLAKRV 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++
Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TL + + L+ + V + L +E+ + I + +E
Sbjct: 121 TPLTLEQDKFNQLVAECAEPGQVLKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
GK +VL CTH+P +++ D + A + L +
Sbjct: 177 VGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPG 235
Query: 248 HALFLSGKP 256
LF + P
Sbjct: 236 QILFENSAP 244
>gi|260435366|ref|ZP_05789336.1| glutamate racemase [Synechococcus sp. WH 8109]
gi|260413240|gb|EEX06536.1| glutamate racemase [Synechococcus sp. WH 8109]
Length = 265
Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 17/258 (6%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
FDSG+GGL VL+++ +Y+ D PYGN + +++ + L Q
Sbjct: 7 GFFDSGLGGLTVLRRVLERHGPVPCVYLGDTARVPYGNRQPDDIRRIAAEVVG-WLRNQQ 65
Query: 77 PVLSVIACNTAFTLIKDEL--RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNT L +D ++ P + +G AAA ++ + +L+TPAT+
Sbjct: 66 VSTVVMACNTTNALARDVAEGQAGVPLIGLIG------AAAAMVETRRVGVLATPATVAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ I + + + +E ++ D++++ + D
Sbjct: 120 SAYRASIEALHPGSVVIEQACPAFVPLIEAG----EMNSDDLRRAAQAYLEPLLAASVDS 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD----DHAL 250
IVL CTHYPL+V + RQL P V +D + +AR+ +L +
Sbjct: 176 IVLGCTHYPLLVPLLRQLVPESVQIIDPAIGVARQLDAILGPPAGISSAPRPFSLQSCRF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
++ PD R G
Sbjct: 236 CVTADPDGFAVRATPWLG 253
>gi|167590293|ref|ZP_02382681.1| glutamate racemase [Burkholderia ubonensis Bu]
Length = 277
Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 11/261 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +F+SG+GGL V++ +R +P +Y+AD PYG D ++ R +D L
Sbjct: 10 APIGVFNSGLGGLSVVEAIRQRLPGEALLYIADSRYAPYGEKSDAFIRARS-QALTDWLV 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNTA T LR+ F ++ +G P IK A + S ++ +L+T ATLR
Sbjct: 69 QNSAKMLVIACNTATTHAIAHLRTQF-AIPIIGVEPGIKPAMQASASKVVGVLATAATLR 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ C + L R+E+ + I+ +E + D
Sbjct: 128 SQRLRALLAENDHACRFVCQAGHGLVERIEQGEAAGSV----IESLLEAYLTPMIDEGAD 183
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL--- 250
+VL THY L++ R++ ++ + +IARR L H + L
Sbjct: 184 TLVLGSTHYALLMPSIRRIFGSRFRLIETATAIARRVDHQLAEYRLHNDANPANAPLQLC 243
Query: 251 --FLSGKPDIAMRRLMQGFGL 269
S + + RL QG L
Sbjct: 244 STATSAEQRAPLARLAQGLAL 264
>gi|325125275|gb|ADY84605.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 261
Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 6/249 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ I +FDSG GGL VL ++ L+P +++ D PYG + + +
Sbjct: 2 SKEYADRPIGVFDSGQGGLTVLSRLVDLIPNEDYVFYGDSANAPYGVKSKEEVYQLAKRV 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++
Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TL + + L+ + V + L +E+ + I + +E
Sbjct: 121 TPLTLEQDKFNQLVAECAEPGQVVKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
GK +VL CTH+P +++ D + A + L +
Sbjct: 177 VGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPG 235
Query: 248 HALFLSGKP 256
LF + P
Sbjct: 236 QILFENSAP 244
>gi|294782801|ref|ZP_06748127.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
gi|294481442|gb|EFG29217.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
Length = 264
Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 12/248 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFS 69
+ I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++K +
Sbjct: 3 DKRQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILD 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILST 128
+ K L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST
Sbjct: 63 FFV-KNNCKLVIVACNTASTAAIDYLRERFP-LPILGIVEAGIKIARKNTKTKNIAVIST 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T N ++ + ++ + +E +E+ + K +
Sbjct: 121 KFTAESHGYKNKAKMIDTELIVKEIACIEFPMMIETGWETFDNREELLNKYLAE-----I 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
K D +VL CTHYPLI + + +D + I + + L ++ +
Sbjct: 176 PKNVDTLVLGCTHYPLIRKDIENHT--NLKVVDPAVQIVDKVKQTLGSLDLLNDKKAKGK 233
Query: 249 A-LFLSGK 255
F++G+
Sbjct: 234 KIFFVTGE 241
>gi|56708260|ref|YP_170156.1| glutamate racemase [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110670731|ref|YP_667288.1| glutamate racemase [Francisella tularensis subsp. tularensis
FSC198]
gi|134302177|ref|YP_001122146.1| glutamate racemase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|224457380|ref|ZP_03665853.1| glutamate racemase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370745|ref|ZP_04986750.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254875080|ref|ZP_05247790.1| glutamate racemase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|56604752|emb|CAG45830.1| glutamate racemase [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110321064|emb|CAL09213.1| glutamate racemase [Francisella tularensis subsp. tularensis
FSC198]
gi|134049954|gb|ABO47025.1| glutamate racemase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151568988|gb|EDN34642.1| hypothetical protein FTBG_00552 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841079|gb|EET19515.1| glutamate racemase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159487|gb|ADA78878.1| glutamate racemase [Francisella tularensis subsp. tularensis
NE061598]
Length = 265
Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K ++
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D+ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 64 DQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE I E K+ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSY----FHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKP 256
++ P
Sbjct: 235 VTDIP 239
>gi|254369138|ref|ZP_04985150.1| hypothetical protein FTAG_00072 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122088|gb|EDO66228.1| hypothetical protein FTAG_00072 [Francisella tularensis subsp.
holarctica FSC022]
Length = 265
Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K + ++
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAVQTAKFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D+ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 64 DQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE I E K+ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSY----FHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKP 256
++ P
Sbjct: 235 VTDIP 239
>gi|160872350|ref|ZP_02062482.1| glutamate racemase [Rickettsiella grylli]
gi|159121149|gb|EDP46487.1| glutamate racemase [Rickettsiella grylli]
Length = 271
Score = 254 bits (651), Expect = 7e-66, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 9/246 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + L+P IY D P+G+ A++ + + D+L
Sbjct: 5 SQPIGIFDSGMGGLTVAHAVTKLLPNESIIYFGDTAHAPWGDKSAAAIQAYSIKIC-DML 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAV-PAIKQAAAYTQSGLISILSTPA 130
K L +IACN+A + + ++ + + P I A Y I ++ T
Sbjct: 64 IKQNCKLILIACNSASAVAYELVKEYLGHKRMVVDVIDPMIDHLARYYVDKTIGLIGTKQ 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + ++ +++ +L +EE I D IK E +
Sbjct: 124 TINSNIYKKKLDELGINIQLNTLATPLLVPLIEEGFMDQTIMSDAIK----TYLKESSLR 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDH 248
D +VL CTHYPLI ++ +D++D +A + L T
Sbjct: 180 NLDALVLGCTHYPLIKQQIKRFYGDSTTIVDSTDIVAEAVKSRLKERKLLAVSTNGGPKK 239
Query: 249 ALFLSG 254
++S
Sbjct: 240 RFYVSD 245
>gi|118594500|ref|ZP_01551847.1| glutamate racemase [Methylophilales bacterium HTCC2181]
gi|118440278|gb|EAV46905.1| glutamate racemase [Methylophilales bacterium HTCC2181]
Length = 267
Score = 254 bits (651), Expect = 7e-66, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 5/223 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
SI +FDSG+GG+ VL+K++ +MP FIYVAD PYG ++KR + ++
Sbjct: 5 PSIGVFDSGVGGISVLEKLQQVMPSERFIYVADSKFAPYGQMTSQEIQKRAFIIIDFLIQ 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA ELR + ++ +G PA+K A + I IL+T TL+
Sbjct: 65 HHSIKLIVVACNTATAACIHELRRNY-NLPIIGMEPAVKPAIFASTKKKIGILATEGTLK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
T L+ +Y + ++ + L +E +I D K+ I + + D
Sbjct: 124 STKFIALLENYEGEALFYVQPCIGLVELIERG----EISIDSTKRLIHSYLLPLKKNGVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
VIVL CTHY I + V +D ++A A L
Sbjct: 180 VIVLGCTHYVFIKEIIEDYFSGTVTVIDTGLAVALHAERTLKE 222
>gi|304410374|ref|ZP_07391993.1| glutamate racemase [Shewanella baltica OS183]
gi|307301915|ref|ZP_07581673.1| glutamate racemase [Shewanella baltica BA175]
gi|304351783|gb|EFM16182.1| glutamate racemase [Shewanella baltica OS183]
gi|306913953|gb|EFN44374.1| glutamate racemase [Shewanella baltica BA175]
Length = 270
Score = 254 bits (651), Expect = 7e-66, Method: Composition-based stats.
Identities = 83/252 (32%), Positives = 129/252 (51%), Gaps = 2/252 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR+ ++ +G VPAIK A + ++S ++ +L T T
Sbjct: 61 SSLTQPNIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPATSLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI + ++C + + S L E+ G D + +EI+ F + +
Sbjct: 120 VNSAYVKMLITDFATECKVLVEDSEALVLASEQKLLGKAFDPDIVTQEIQRIFNKPDAFD 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TDV+VLACTH+PLI + P V +D+ +IA R LL T + +
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQTCSPILDPEVTF 239
Query: 251 FLSGKPDIAMRR 262
+ +G D +
Sbjct: 240 YTTGNVDSEQAK 251
>gi|261856843|ref|YP_003264126.1| glutamate racemase [Halothiobacillus neapolitanus c2]
gi|261837312|gb|ACX97079.1| glutamate racemase [Halothiobacillus neapolitanus c2]
Length = 288
Score = 254 bits (651), Expect = 7e-66, Method: Composition-based stats.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 7/254 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V Q +R +P IY+AD PYG+ + +R + + +
Sbjct: 13 PSAPIGIFDSGVGGLSVYQAVRHALPAEDIIYIADSGHAPYGDRSSDFITERAVAMTGFL 72
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + +ACNTA + +LR F S+ + PAIK A +++SG I +L+T T
Sbjct: 73 VAAGAKAVV-VACNTATVIAVAQLRRQF-SIPIIALEPAIKPAIEHSRSGTIGVLATRKT 130
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ L + + + L +VE + I++ +E
Sbjct: 131 IESPAVERLCRIHGANTRVLLQPCPGFVEQVERGEMEHPKTYELIRRYVEPLLA----SG 186
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDHAL 250
D +VL CTHY + R + V LD+S ++AR+ R + +
Sbjct: 187 ADTLVLGCTHYVYLAQQIRAIVGPDVTILDSSAAVARQVGRRIGSSSVAASDGRITEDQF 246
Query: 251 FLSGKPDIAMRRLM 264
F + R +M
Sbjct: 247 FTTAASTDHARTVM 260
>gi|300811367|ref|ZP_07091863.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497602|gb|EFK32628.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 261
Score = 254 bits (651), Expect = 7e-66, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 6/249 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ I +FDSG GGL VL ++ LMP +++ D PYG + + +
Sbjct: 2 SKEYADRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRV 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+++DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++
Sbjct: 62 VDELIDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TL + + L+ + V + L +E+ + I + +E
Sbjct: 121 TSLTLEQDKFNQLVAECAEPGQVAKVPAPKLVELIEKG----QTDSPAIYQYLEELLAPY 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
GK +VL CTH+P +++ D + A + L +
Sbjct: 177 AGKAA-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPG 235
Query: 248 HALFLSGKP 256
LF + P
Sbjct: 236 QILFENSAP 244
>gi|238794886|ref|ZP_04638485.1| Glutamate racemase [Yersinia intermedia ATCC 29909]
gi|238725761|gb|EEQ17316.1| Glutamate racemase [Yersinia intermedia ATCC 29909]
Length = 241
Score = 254 bits (651), Expect = 8e-66, Method: Composition-based stats.
Identities = 71/236 (30%), Positives = 121/236 (51%), Gaps = 4/236 (1%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T++ L
Sbjct: 2 LPDLHYIYAFDNVAFPYGEKSGEFIIERVLEIVTAVQQRHPLAIVVIACNTASTVVLPAL 61
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S
Sbjct: 62 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTRDLIERFATDCKIELLGS 120
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + + +KK + +E D IVL CTH+PL+V Q+ P
Sbjct: 121 SELVELAESKLHGGAVPIETLKKILHPWLAMREP--PDTIVLGCTHFPLLVEELAQVLPE 178
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLK 270
+D+ +IARR L+ + D+ A ++ D + ++Q +G
Sbjct: 179 GTRMVDSGAAIARRTAWLISSQENVVSSQEDNIAYCMALNADTDVLLPVLQSYGFP 234
>gi|261854703|ref|YP_003261986.1| glutamate racemase [Halothiobacillus neapolitanus c2]
gi|261835172|gb|ACX94939.1| glutamate racemase [Halothiobacillus neapolitanus c2]
Length = 286
Score = 254 bits (651), Expect = 8e-66, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 108/257 (42%), Gaps = 7/257 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ K I IFDSG+GGL V Q +R +P IY+AD PYG+ + +R + +
Sbjct: 5 DTKPTAPIGIFDSGVGGLSVYQAVRHALPAEDIIYIADSGFAPYGDRSSDFITERAVAMT 64
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
++ + V CNTA + +LR F S+ + PAIK A ++QSG I +L+T
Sbjct: 65 DFLIAAGAKAVVVA-CNTATVIAVTQLRRQF-SIPIIALEPAIKPAIEHSQSGTIGVLAT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ L ++ + L +VE D I++ +E
Sbjct: 123 RKTIESPAVERLCRTHGVNTRVLLQPCPGFVEQVERGEMDHPDTTDLIRRYVEPLLA--- 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDD 247
D +VL CTHY + R + V LD+S ++AR+ R + T
Sbjct: 180 -AGADTLVLGCTHYVYLAQQIRTIVGPDVSILDSSAAVARQVGRRIGSSEVAASTGRCGQ 238
Query: 248 HALFLSGKPDIAMRRLM 264
F + R +M
Sbjct: 239 DQFFTTAASTDHARAVM 255
>gi|326387672|ref|ZP_08209278.1| glutamate racemase [Novosphingobium nitrogenifigens DSM 19370]
gi|326207718|gb|EGD58529.1| glutamate racemase [Novosphingobium nitrogenifigens DSM 19370]
Length = 285
Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats.
Identities = 88/247 (35%), Positives = 123/247 (49%), Gaps = 3/247 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSG+GGL VL KMR L+P+ IYVAD+ G PYG + + R+ L + +
Sbjct: 26 QPILMFDSGVGGLSVLAKMRLLLPQAPVIYVADNAGLPYGQKTEAQIAARVSGLLGRMTE 85
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R
Sbjct: 86 RLHPRLVCIACNTASTIALASVREVL-EVPIVGTVPAIKPAAAMTKTGVIGLLGTEATIR 144
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ Y L + + + + L + E G + + + +G R D
Sbjct: 145 QGYVDRLESEFAADKRLLRHGAPELVTAAEARLRGRDVDPAVFARAAQALRSMPDGDRID 204
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VLACTH+PLI Q V ++D SD IARR L R D ALF
Sbjct: 205 TVVLACTHFPLIERDLAQAFGPDVRFIDGSDGIARRIAHLTQGQEFL--RKEPDLALFTR 262
Query: 254 GKPDIAM 260
PD+
Sbjct: 263 ADPDLPE 269
>gi|23016272|ref|ZP_00056030.1| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1]
Length = 273
Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 4/252 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
I IFDSG+GGL VL+ +R +P+ IY+ D PYG + +
Sbjct: 4 NPNLPIGIFDSGVGGLTVLKAVRERLPDESLIYLGDTARLPYGTKSAQTVAAYALEATRA 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
++ Y ++A NT+ + +R+ FP + +G V P AA + G I +++T
Sbjct: 64 LVA-YGIKALLVADNTSSAHALEAVRAAFPGLPVIGVVEPGAAAAATASARGRIVVIATE 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ ++ I + + + VEE I E + + F E
Sbjct: 123 SAVQAGSYPRAILHSRPNALVTQLPCPLFVPMVEEGLVDGPIAEQIARHYLGPLFTGPEA 182
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTH+P + +FR+L V +D++ + A LL
Sbjct: 183 A--DCLLLGCTHFPALAPLFRRLLGRDVAVVDSASTTAMVLEDLLSLRRLCNEGGPSRVR 240
Query: 250 LFLSGKPDIAMR 261
+ P+ R
Sbjct: 241 YLATDAPERFAR 252
>gi|262067163|ref|ZP_06026775.1| glutamate racemase [Fusobacterium periodonticum ATCC 33693]
gi|291379121|gb|EFE86639.1| glutamate racemase [Fusobacterium periodonticum ATCC 33693]
Length = 264
Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 12/248 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFS 69
+ I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++K +
Sbjct: 3 DKRQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILD 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILST 128
+ K L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST
Sbjct: 63 FFV-KNNCKLVIVACNTASTAAIDYLREKFP-LPILGIVEAGIKIARKNTKTKNIAVIST 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T N ++ ++ ++ + +E +E+ + K +
Sbjct: 121 KFTAESHGYKNKAKMIDTELNVKEIACVEFPMMIETGWETFDNREELLNKYLSE-----I 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
K D +VL CTHYPLI + + +D + I + + L + +
Sbjct: 176 PKNVDTLVLGCTHYPLIRKDIEDRT--KLKVVDPAVQIVDKVKQTLGSLELLNDKKTKGK 233
Query: 249 A-LFLSGK 255
F++G+
Sbjct: 234 KIFFVTGE 241
>gi|237740114|ref|ZP_04570595.1| glutamate racemase [Fusobacterium sp. 2_1_31]
gi|229422131|gb|EEO37178.1| glutamate racemase [Fusobacterium sp. 2_1_31]
Length = 264
Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFS 69
+ I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++K +
Sbjct: 3 DKRQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILD 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILST 128
+ K L ++ACNTA T D LR FP + LG V A IK A T++ I+++ST
Sbjct: 63 FFV-KNNCKLVIVACNTASTAAIDYLREKFP-LPILGIVEAGIKIARKNTKTKNIAVIST 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T N ++ ++ ++ + +E +E+ + K +
Sbjct: 121 KFTAESHGYKNKAKMIDTELNVKEIACVEFPMMIETGWDTFDNREELLNKYLAE-----I 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
K D +VL CTHYPLI + + +D + I + + L ++ +
Sbjct: 176 PKNVDTLVLGCTHYPLIRKDIEDRT--KLKVVDPAVQIVDKVKQTLGSLDLLNDKKAKGK 233
Query: 249 A-LFLSGK 255
F++G+
Sbjct: 234 KIFFVTGE 241
>gi|308233557|ref|ZP_07664294.1| glutamate racemase [Atopobium vaginae DSM 15829]
gi|328943355|ref|ZP_08240820.1| glutamate racemase [Atopobium vaginae DSM 15829]
gi|327491324|gb|EGF23098.1| glutamate racemase [Atopobium vaginae DSM 15829]
Length = 261
Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 17/269 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ N Q I +FDSG+GG+ VL+K+ +P F Y D PYG +
Sbjct: 1 MSNR------QGFIGVFDSGLGGISVLKKLVSQLPHEDFFYFGDTGHNPYGARSADDIFD 54
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ +++ K VIACNTA + +LR+ +P + +G PA+KQA
Sbjct: 55 LSKAIVDNMVCKGA-KAVVIACNTATAVAAHKLRTMYPQLPLIGIEPALKQACDAHIYKH 113
Query: 123 ISILSTPATLRRTYTSNLIHSY----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
I +L+TP TLR L + I ++ LA R+E+ +++++
Sbjct: 114 ILVLATPVTLRMEKFHQLRDRMCACNSANVKISALACDGLAHRIEQGNLDAPDLDNDLRT 173
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + + PV + D + +A R +L +
Sbjct: 174 ILAPYI-----GSVDAVVLGCTHYPFVKDRIVSILGNPVCF-DGAAGVAHHVRDVLQDRD 227
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGF 267
++ F + D L + F
Sbjct: 228 LLNDQIERGCVTFATSAHDAHQLDLYEQF 256
>gi|282882426|ref|ZP_06291053.1| glutamate racemase [Peptoniphilus lacrimalis 315-B]
gi|281297746|gb|EFA90215.1| glutamate racemase [Peptoniphilus lacrimalis 315-B]
Length = 270
Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN SI FDSG+GGL VL+ +P +IY D + PYG +++
Sbjct: 1 MDNR--------SIGFFDSGVGGLSVLKVSLGEIPRESYIYYGDTLRMPYGVKSKEDIER 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
K ++VIACNTA + R F F PA+K++ ++S
Sbjct: 53 YTCQAMEFFRSK-NVKMAVIACNTATCYGIKKARELFDFPIFGVVEPAVKESLHKSKSKK 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+++L+T T+ SY S +I + L +E ++++ I I
Sbjct: 112 VALLATEGTVNSGVYDKFFESYSSNIYIKEIGCPDLVLAIENG----DLRDEVIVPVINK 167
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLLPRINT 239
+ E D ++L CTH+P++ + F+++ V +D ++ + L +
Sbjct: 168 YLDKFEDFEYDALILGCTHFPIVENTFKRILAKFDRKVQLVDPAEITINELKEYLENHDM 227
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQ 265
+ ++S + L +
Sbjct: 228 LGDHDEESIDFYVSSHKEKFKSTLEK 253
>gi|300310872|ref|YP_003774964.1| glutamate racemase [Herbaspirillum seropedicae SmR1]
gi|300073657|gb|ADJ63056.1| glutamate racemase protein [Herbaspirillum seropedicae SmR1]
Length = 297
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 14/268 (5%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P +I IFDSGIGGL VL+ + +P +Y AD PYG+ + + +R +
Sbjct: 21 PMPTAADAAIGIFDSGIGGLSVLRHIHAALPREQLLYFADSGYAPYGDKTEAQIVERSLA 80
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ S +L++ L V+ACNTA +R+ +P + +G P +K AA T+S + +L
Sbjct: 81 IASFLLEQRVKAL-VVACNTATAAAIQAIRTRWPQLLVVGIEPGLKPAAQLTRSRTVGVL 139
Query: 127 STPATLRRTYTSNLIHSYVSQCHIH--LVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+T +TL + L +Q + + + L +E+ ++ + +E
Sbjct: 140 ATRSTLASQRFALLQAQMQAQYQVRYLPQACVGLVDLIEKG----ELHSPATVQLLERYL 195
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D +VL CTHYP + + L D +D ++ R+ + LL
Sbjct: 196 APLLEQGADTLVLGCTHYPFVRPAIESVCKSLVGETPDIIDTGQAVTRQLQRLLEAGQLQ 255
Query: 241 QTRVFDDHALFLSGKP---DIAMRRLMQ 265
A F + + A R L++
Sbjct: 256 TGAASGSLAGFTTASRSTLENAFRGLLK 283
>gi|139438502|ref|ZP_01772018.1| Hypothetical protein COLAER_01010 [Collinsella aerofaciens ATCC
25986]
gi|133776041|gb|EBA39861.1| Hypothetical protein COLAER_01010 [Collinsella aerofaciens ATCC
25986]
Length = 294
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 96/267 (35%), Gaps = 15/267 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL V + + +P Y D PYG + ++ + L
Sbjct: 12 RPIGVFDSGLGGLTVARAIATALPHESVYYFGDTKRCPYGTRTEDEVRSFALQ-AGRWLS 70
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
K+ + VIACNTA + + +G + P + A T++ + +L+T T+
Sbjct: 71 KHDVKIMVIACNTATAAALRLAQQVL-DVPVIGVIAPGARAAINSTRTRRVGVLATNLTI 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI------------KIKEDEIKKEI 180
R + I + ++ + VE ++ +
Sbjct: 130 RSGAYTRAIQDLDAGVDVYGCPASSFVEVVEHELASGAHLQEQWLENEDIFDTPAVRALV 189
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D +VL CTH+PL+V R V + +++ R +L R
Sbjct: 190 GATVEPLRDRGIDTVVLGCTHFPLLVGPIRHALGPGVRVVSSAEETTRELTDILTRREQL 249
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ F + +IA + F
Sbjct: 250 AGDAAEPQHRFATTSDNIAEFAVAGSF 276
>gi|148359847|ref|YP_001251054.1| glutamate racemase [Legionella pneumophila str. Corby]
gi|296107897|ref|YP_003619598.1| glutamate racemase [Legionella pneumophila 2300/99 Alcoy]
gi|148281620|gb|ABQ55708.1| glutamate racemase [Legionella pneumophila str. Corby]
gi|295649799|gb|ADG25646.1| glutamate racemase [Legionella pneumophila 2300/99 Alcoy]
Length = 272
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 10/257 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M +
Sbjct: 1 MNSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQM 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISIL 126
++++ VIACNTA T L+S + L P A + T++ I++L
Sbjct: 61 AKILVERR-IKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVL 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ +LI + + + + +L + EE + + +K ++ E
Sbjct: 120 ATETTIASRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RV 244
D ++L CTH+P+ + L P V +D++ + A LL N + V
Sbjct: 180 ------DAVLLGCTHFPVFKPLLSSLLPKGVAIVDSAQATAISLYELLQNQNLYNDNLEV 233
Query: 245 FDDHALFLSGKPDIAMR 261
++ + +
Sbjct: 234 LPRINYLVTDSINRFQK 250
>gi|238020101|ref|ZP_04600527.1| hypothetical protein VEIDISOL_01982 [Veillonella dispar ATCC 17748]
gi|237863625|gb|EEP64915.1| hypothetical protein VEIDISOL_01982 [Veillonella dispar ATCC 17748]
Length = 267
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-YLACHIAEAL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K L VIACNT + D +R S+ +G +K A + ++S I I++T AT+
Sbjct: 65 EKQPVKLMVIACNTFTVVALDAVRERV-SVPVIGVSQGVKTAISQSKSKTIGIMATVATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ + + ++ +
Sbjct: 124 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQG----HLDDHFVRDVCTEYLEPLLSREI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
+V+VL CTH+P + + +L+ + ++D + + R L + + +L+
Sbjct: 180 EVVVLGCTHFPFVQPLLEELTSGRIQFIDPAFETSELVRRRLEGKDLFNPQKTAGTVSLY 239
Query: 252 LSGKPDIAMR 261
+ ++ +
Sbjct: 240 FTKDIELGDK 249
>gi|225175994|ref|ZP_03729986.1| glutamate racemase [Dethiobacter alkaliphilus AHT 1]
gi|225168582|gb|EEG77384.1| glutamate racemase [Dethiobacter alkaliphilus AHT 1]
Length = 267
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 10/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I FDSG GGL VL +P F+Y D PYG+ ++ + +++
Sbjct: 7 ADKPIGFFDSGAGGLTVLASAVKCLPNESFLYFGDTAHAPYGSRPVEDVRNLSVQ-AAEM 65
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+ACNTA + LR P + +G PA+K A A G + +++TP T
Sbjct: 66 LCRQGCKALVVACNTATSAAVHVLREMLP-IPVIGMEPAVKPALAG--GGKVLVMATPLT 122
Query: 132 LRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L+ L + ++ ++ L VE +++ + F +
Sbjct: 123 LKEEKFKALCDRCGADESNVIVLPCPGLVEMVERGETEGP----AVERALAQLFAGADLT 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
+VL CTHY + + P V ++D + ++ +L + + + +
Sbjct: 179 GVSAVVLGCTHYLFLRRALAGILPADVKFVDGNLGTVKQLARILKKEGLLREEKTSQTNV 238
Query: 250 LFLSGKPDIAMRRLMQGF 267
LS + ++R + F
Sbjct: 239 EILSSGGEASVRLFKELF 256
>gi|309388889|gb|ADO76769.1| glutamate racemase [Halanaerobium praevalens DSM 2228]
Length = 277
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 114/265 (43%), Gaps = 8/265 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + +I + DSG+GGL V ++ +P + +Y D + PYG ++ + +
Sbjct: 1 MVENSKKAIGLLDSGVGGLTVAFEIFKFLPRENIVYFGDTLHLPYGPKSLSVVRTYVEKI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126
+ ++++ + +IACNTA + D ++ F + G + A +A T+ I+++
Sbjct: 61 INYLIEEKKVKAIIIACNTATSAALDYVKDKF-EVPIFGMIKRAAFKAVTLTKKKKIAVI 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T++ I S ++ ++ + VE K E++K +
Sbjct: 120 GTEGTIKSQVYQQAILSRNTEIEVYTRICPEFVTLVEAGI----FKGPEVRKIADFYLKP 175
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-- 244
+ D ++LACTH+P + + L V ++ + + + L +N ++
Sbjct: 176 LKNYGVDTLILACTHFPYLTPIIADLMGAKVKLVNPASELVAELQNTLSNLNLLNSQNDN 235
Query: 245 FDDHALFLSGKPDIAMRRLMQGFGL 269
F H L +S K I+ + L G
Sbjct: 236 FTQHQLLVSKKQKISTKFLQNGSSF 260
>gi|91216701|ref|ZP_01253666.1| glutamate racemase [Psychroflexus torquis ATCC 700755]
gi|91185170|gb|EAS71548.1| glutamate racemase [Psychroflexus torquis ATCC 700755]
Length = 262
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 126/256 (49%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +++FDSG+GG +L+++ L+P + +Y+AD PYG + + +++
Sbjct: 3 KHPVVLFDSGVGGTSLLKEIIHLLPHENIVYLADSKNAPYGLRTSQDIIALSIKN-TELA 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + + V+ACNTA T LRS + S+ F+G PAIK AA +++ I +L+T TL
Sbjct: 62 IQLKAKMIVVACNTATTNAISFLRSNY-SLPFIGIEPAIKPAALNSKAKRIGVLATKGTL 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
S+ ++ V + VE + + + ++I+ +
Sbjct: 121 SSELFKQTSESFTEGVNVIEVIGKGIVEAVEGGWTNDERFINNLNQQIQ----PFIKEDI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTH+P I+ R+L P V +D+ ++A++ + +L + T F D ++
Sbjct: 177 DYLVLGCTHFPYIIPKLRELLPKHVTLIDSGRAVAKQTKAILREKHLKNTDDSFGDINIY 236
Query: 252 LSGKPDIAMRRLMQGF 267
+ ++ LM+ +
Sbjct: 237 TNTVNSSHLQELMKDY 252
>gi|254785730|ref|YP_003073159.1| glutamate racemase [Teredinibacter turnerae T7901]
gi|237683438|gb|ACR10702.1| glutamate racemase [Teredinibacter turnerae T7901]
Length = 283
Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 85/238 (35%), Positives = 126/238 (52%), Gaps = 3/238 (1%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ P IL+ DSG GGL V +++ P+ Y AD GFPYG D L +
Sbjct: 1 MPVKPTLASKNARILVLDSGAGGLTVAREILHRNPDVSMDYFADIAGFPYGTMPDDVLIR 60
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
RL+ L + L + QP + V+ACNTA TL LR+ +P++ F+G VPAIK AA+ T++G+
Sbjct: 61 RLVSLVGNCLSQRQPDIVVLACNTASTLALRALRARYPTVEFVGVVPAIKPAASITRTGV 120
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+TPAT+ R YT LI + + S L E+ G K + +E+
Sbjct: 121 IGLLATPATVNRDYTRQLIEDFAGNHEVVTHGSNPLVVCAEQLLQGTKPDTGILIEELGK 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP--WPVDWLDNSDSIARRARCLLPRIN 238
+ D IVLACTH+PL++ F + P + W+D+ +IA R LL ++
Sbjct: 181 LRTKSTAGSVDTIVLACTHFPLLLPYF-KALPSCESISWVDSGSAIANRVHHLLQKLG 237
>gi|54295149|ref|YP_127564.1| hypothetical protein lpl2229 [Legionella pneumophila str. Lens]
gi|53754981|emb|CAH16469.1| hypothetical protein lpl2229 [Legionella pneumophila str. Lens]
Length = 279
Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 10/256 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M +
Sbjct: 9 NSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQMA 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILS 127
++++ VIACNTA T L+S + L P A + T++ I++L+
Sbjct: 69 KILVERR-IKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ +LI + + + + +L + EE + + +K ++ E
Sbjct: 128 TETTIASRAYHDLIIKNLPEAVVSTRACSVLVALAEEGMVTNAVAREALKHYLDDFSDE- 186
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245
D ++L CTH+P+ + L P V +D++ + A LL N V
Sbjct: 187 -----DAVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNLRNDNLEVP 241
Query: 246 DDHALFLSGKPDIAMR 261
++ + +
Sbjct: 242 PRINYLVTDSINRFQK 257
>gi|146329274|ref|YP_001208944.1| glutamate racemase [Dichelobacter nodosus VCS1703A]
gi|146232744|gb|ABQ13722.1| glutamate racemase [Dichelobacter nodosus VCS1703A]
Length = 264
Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 11/255 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG + + +P+ I+ AD+ PYG+ + + +L
Sbjct: 3 NAPIGLFDSGVGGTSIWCAVCAELPQESTIFWADNAHAPYGDKSPAEIIELAARNTEQLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + +IACNTA LR+ + ++ F+ PAIK AA T++G + +L+T +TL
Sbjct: 63 SRG-CKMIIIACNTASAHAAAILRTRY-NVPFVAVEPAIKPAALATKTGAVGVLATTSTL 120
Query: 133 RRTYTSNLIHSY-VSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
N + + +Q ++ L++ + +E +++ ++ +
Sbjct: 121 MSAAFQNTVTRWVDTQKNVRLIARSGRGIVELIESG----QMESANMRALLAAHAQAFRA 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DH 248
+ D +VL CTHYP + + ++L P V +D+ ++AR++R +L + + V H
Sbjct: 177 EHIDQLVLGCTHYPYLRPLLQELLPA-VSIIDSGAAVARQSRRILAQWDLLNDGVMPARH 235
Query: 249 ALFLSGKPDIAMRRL 263
F + + + + +
Sbjct: 236 QCFCTAESAVLSQFV 250
>gi|315226136|ref|ZP_07867924.1| glutamate racemase [Parascardovia denticolens DSM 10105]
gi|315120268|gb|EFT83400.1| glutamate racemase [Parascardovia denticolens DSM 10105]
Length = 282
Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG+ V++++R MP+ I+ D PYG + + L F +D L K
Sbjct: 25 PIGVFDSGMGGISVVRQLRRDMPDQDIIFFGDSANAPYGTRPINEVTD-LSFAVADRLVK 83
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132
VIACNTA + LR + + +G PA+K A +S + + +T TL
Sbjct: 84 QGVKAIVIACNTATSACAPLLRRHY-DIPIIGMEPALKVAIDRGQGKSQHVLVTATKLTL 142
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ I L + VE G + + IE +
Sbjct: 143 EGRKFAALMDRERGNNIIETQPCPDLVTLVEADDLG---DRELVLSTIERYLRPFDLDSL 199
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D IVL CTH+ FR++ P +D + +R + +L R + L
Sbjct: 200 DSIVLGCTHFVFYRRYFREILPDYAAIIDGNQGTSRHVQEVLGYQGKSAERAAGKGTVIL 259
Query: 253 -SGKPDIAMRRLMQGF 267
+ K D LMQ
Sbjct: 260 QNSKTDPQTAALMQAL 275
>gi|303239730|ref|ZP_07326254.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
gi|302592667|gb|EFL62391.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
Length = 260
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 9/241 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL ++P +IY AD + PYG +KK + I+ K
Sbjct: 3 IGFFDSGIGGITVLYDTLKVLPNEDYIYYADTLNVPYGPKPKDEVKKYIFSAIDFII-KQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
+ VIACNTA ++ +ELR+ + S+ +G PAIK A + + + + +T TL+
Sbjct: 62 EVKAVVIACNTATSVAIEELRNKY-SIPIVGMEPAIKPAVEKDRDANKRVLVTATALTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NLI ++ + L+ L E+ ++ E+ + ++ + + +
Sbjct: 121 EEKLHNLIAKLDNEHVVDLLPLPGLVQFSEK----LEFNEEIVLPYLKEQLSKYDFNNYE 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+ +FR+L+ + +D + A + +L +N+ + S
Sbjct: 177 TIVLGCTHFSYFKDMFRKLALSHIKVIDGNIGTANNLKRILKEMNSLN-EGNGSITFYNS 235
Query: 254 G 254
G
Sbjct: 236 G 236
>gi|152980748|ref|YP_001352569.1| glutamate racemase [Janthinobacterium sp. Marseille]
gi|151280825|gb|ABR89235.1| glutamate racemase [Janthinobacterium sp. Marseille]
Length = 284
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 66/274 (24%), Positives = 115/274 (41%), Gaps = 12/274 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M YP I IFDSG+G L VL+ ++ +P H + AD PYG D A+
Sbjct: 1 MSFSAYPDPVAADAPIGIFDSGVGALSVLRHIQARLPSEHLLCFADSGYAPYGGKSDAAI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + + K V+ACNTA + LR +P + +G P +K AA +++S
Sbjct: 61 IERTLDIAAFLTTK-NIKAIVVACNTATAAAIEALRQHYPQLIIVGVEPGLKPAAVFSKS 119
Query: 121 GLISILSTPATLRRTYTSNLIHSY--VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
G +L+T +TL + L + + + L ++E+ ++ E
Sbjct: 120 GKAGVLATASTLASSRFIALRDQISTSTGITFLTQACVGLVEQIEKG----ELDSTETIA 175
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRARCLL 234
+E D + L CTHYP + ++ S PV +D ++++R+ LL
Sbjct: 176 MLERYVTPLLRGGADTLALGCTHYPFVQPAIEVIAQRESAVPVTIIDTGEAVSRQLERLL 235
Query: 235 PRINTHQ-TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + F +G D + +
Sbjct: 236 QQRGLQRFETTAGSLQAFTTGNRDALVAAFAKLL 269
>gi|282849105|ref|ZP_06258490.1| glutamate racemase [Veillonella parvula ATCC 17745]
gi|282580809|gb|EFB86207.1| glutamate racemase [Veillonella parvula ATCC 17745]
Length = 267
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 109/247 (44%), Gaps = 7/247 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-YLACRIAETL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K L VIACNT + D +R S+ +G +K A ++S I I++T AT+
Sbjct: 65 EKQPVKLMVIACNTFTVVALDAVRE-LVSVPVIGVSQGVKTAINKSKSKTIGIMATVATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ + + +++ + +
Sbjct: 124 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQG----HLDDYFVREICKEYLEPLLSREI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251
+V+VL CTH+P + + +L+ + ++D + + R L N + L+
Sbjct: 180 EVVVLGCTHFPFVQPLLEELTSGRIRFIDPAFETSELVRHRLESKNLFNPQDTVGTVTLY 239
Query: 252 LSGKPDI 258
+ ++
Sbjct: 240 FTKDVEL 246
>gi|269797494|ref|YP_003311394.1| glutamate racemase [Veillonella parvula DSM 2008]
gi|269094123|gb|ACZ24114.1| glutamate racemase [Veillonella parvula DSM 2008]
Length = 267
Score = 252 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 109/247 (44%), Gaps = 7/247 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-YLACRIAETL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K L VIACNT + D +R S+ +G +K A ++S I I++T AT+
Sbjct: 65 EKQPVKLMVIACNTFTVVALDAVRE-LVSVPVIGVSQGVKTAINKSKSKTIGIMATVATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ + + +++ + +
Sbjct: 124 NSHIHKHVALEVDHEVFVWEQPCPELAGLIEQG----HLDDYFVREVCKDYLEPLLSREI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251
+V+VL CTH+P + + +L+ + ++D + + R L N + L+
Sbjct: 180 EVVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNHQDTVGTVTLY 239
Query: 252 LSGKPDI 258
+ ++
Sbjct: 240 FTKDVEL 246
>gi|257463297|ref|ZP_05627695.1| glutamate racemase [Fusobacterium sp. D12]
Length = 274
Score = 252 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 6/240 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL + ++P+ +FIY AD PYG + K ++ K
Sbjct: 16 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADIDHVPYGTKTKEEIIKYSSEAVEFLVQKG 75
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA + ELR + ++ +G PA+K+A + + +++TP T++
Sbjct: 76 -VKAIVIACNTATSAAIQELREKY-TLPIIGMEPAVKKAIDFHPKKRVLVIATPMTIQGE 133
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NLI ++ + V+ L + +A +E+E+ + + + +
Sbjct: 134 KLHNLIEKVDTEHLVDAVALPKLVT----FAEEENFEEEEVTEYLREALKHFNLENYSSV 189
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ +++ P V +LD ++ ++ L + + + SG+
Sbjct: 190 VLGCTHFNYFKDSLKKMLPKGVHFLDGNEGTIKKLISELEKRKALEKNSSRKIEYYYSGR 249
>gi|187931550|ref|YP_001891534.1| glutamate racemase [Francisella tularensis subsp. mediasiatica
FSC147]
gi|187712459|gb|ACD30756.1| glutamate racemase [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 265
Score = 252 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 100/243 (41%), Gaps = 10/243 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K ++
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D+ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 64 DQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +H ++ + S +EE I E K+ + K
Sbjct: 121 NSNAYALQMHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSY----FHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSG 254
++
Sbjct: 235 VTD 237
>gi|317060877|ref|ZP_07925362.1| glutamate racemase [Fusobacterium sp. D12]
gi|313686553|gb|EFS23388.1| glutamate racemase [Fusobacterium sp. D12]
Length = 261
Score = 252 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 6/240 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL + ++P+ +FIY AD PYG + K ++ K
Sbjct: 3 IGVFDSGIGGLSVLHQAMQMLPQENFIYYADIDHVPYGTKTKEEIIKYSSEAVEFLVQKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA + ELR + ++ +G PA+K+A + + +++TP T++
Sbjct: 63 -VKAIVIACNTATSAAIQELREKY-TLPIIGMEPAVKKAIDFHPKKRVLVIATPMTIQGE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NLI ++ + V+ L + +A +E+E+ + + + +
Sbjct: 121 KLHNLIEKVDTEHLVDAVALPKLVT----FAEEENFEEEEVTEYLREALKHFNLENYSSV 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ +++ P V +LD ++ ++ L + + + SG+
Sbjct: 177 VLGCTHFNYFKDSLKKMLPKGVHFLDGNEGTIKKLISELEKRKALEKNSSRKIEYYYSGR 236
>gi|162453120|ref|YP_001615487.1| glutamate racemase [Sorangium cellulosum 'So ce 56']
gi|161163702|emb|CAN95007.1| glutamate racemase [Sorangium cellulosum 'So ce 56']
Length = 309
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 56/262 (21%), Positives = 104/262 (39%), Gaps = 12/262 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG+GGL V++ +R P +Y+ D PYG + + + ++
Sbjct: 6 DAPLGVFDSGLGGLTVVRALRRRCPAEDIVYLGDTARVPYGTRSPETVVRYALGCARVLI 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ V+ACNT + D LR + LG + P + A A ++ I +L T T
Sbjct: 66 GRG-VKAIVVACNTVSAVAIDMLRVEL-DLPVLGVILPGARAAVAASRGATIGVLGTAGT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + S ++ + ++ +L S EE ++ ++ +E G
Sbjct: 124 IASGAYPRAVASLSTRTEVAGQAAPLLVSLAEEGWLEGEVPRLVARRYLE----PLIGAG 179
Query: 192 TDVIVLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFD 246
IVL CTH+PL+ L+ P+ +D++ + A L +R
Sbjct: 180 ARSIVLGCTHFPLLRAAIEAETASLAGGPLPIVDSASATAEEVASFLAERGLATSRSTPG 239
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+L ++ P + G
Sbjct: 240 GLSLLVTDLPKSFATVAARFLG 261
>gi|196229452|ref|ZP_03128317.1| glutamate racemase [Chthoniobacter flavus Ellin428]
gi|196226684|gb|EDY21189.1| glutamate racemase [Chthoniobacter flavus Ellin428]
Length = 295
Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 12/272 (4%)
Query: 1 MKIDNYP-CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
M D +P + + ++DSG GGL VL+++R +PE +IY+ D PYG +
Sbjct: 1 MPADFFPNASSPISCPVGVYDSGYGGLTVLRQLRRTLPELDYIYLGDSGRAPYGGRDVDT 60
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS--MAFLGA-VPAIKQAAA 116
+ + + + V+AC+T + L+ + S LG +PA + A
Sbjct: 61 ILDFAEQCVERLFAEG-CRVVVVACHTVSCVALRHLQHRYGSAERRILGVTIPAAEAAVN 119
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T+ G I + T T+ + ++ + V + +LA VEE +I +
Sbjct: 120 RTR-GHIGFVGTARTVASHTFRTEVRKLNAEVKVTEVPAPLLAPIVEEGWEDTEIARLAV 178
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ + D +VL CTHYPL+ F++L+P PV L+ + +A R R R
Sbjct: 179 QRYLA------MFDGVDTLVLGCTHYPLLEREFQELTPAPVQVLNPAPEVAERFRAWRER 232
Query: 237 INTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
SG + + G
Sbjct: 233 HPGFAPAGSGRLRFLSSGDAARFAKHGARFLG 264
>gi|299529106|ref|ZP_07042554.1| glutamate racemase [Comamonas testosteroni S44]
gi|298722862|gb|EFI63771.1| glutamate racemase [Comamonas testosteroni S44]
Length = 284
Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats.
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 18/262 (6%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDILDKYQPVLSV 81
+GGL VLQ +R +P F+Y+AD PYG+ D +++R + + +L+++ + V
Sbjct: 1 MGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAIAKYLLEQHDIKILV 60
Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
IACNTA + LR P + +G PAIK A+ +Q+ + +++T T+ + L+
Sbjct: 61 IACNTATAAAVELLRERLPQLPVIGVEPAIKPASFSSQTHHVGVMATRGTISSQRVARLV 120
Query: 142 HSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGCFIE-----KEGKRTD 193
+ + HL + LA +E E A EI+ + + D
Sbjct: 121 SEHGQRAEFHLQACDGLARAIEQSTEQALPEDASATEIRALCAKYTSALGSFGLKTGQMD 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--------F 245
+VL CTHY + R L + LD +AR+ R +L + N
Sbjct: 181 TLVLGCTHYVFVKDDLRALLGPDIQLLDTGAPVARQTRRMLEQRNLLGAETDGSLQLAQA 240
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
D L +G+ AM+ Q +
Sbjct: 241 DQIQLMTTGRL-TAMQAAAQRW 261
>gi|326202256|ref|ZP_08192125.1| glutamate racemase [Clostridium papyrosolvens DSM 2782]
gi|325987374|gb|EGD48201.1| glutamate racemase [Clostridium papyrosolvens DSM 2782]
Length = 258
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 6/237 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I DSG GG+ VL + +P+ ++IY AD PYG +++ + ++ K
Sbjct: 6 IGFLDSGFGGITVLSEALRQLPQENYIYYADIEHVPYGTKTKEEVREYVFRAVEFLV-KQ 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ ELR + LG PA+K A + +L+T TLR
Sbjct: 65 GIKALVVACNTATSIAVRELRGMY-DFPILGMEPAVKPAVRNGNGKRVLVLATALTLREE 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL+ + + + L E + D I I+ +
Sbjct: 124 KFHNLVQRVDQEHVVDYLPFPELVEMAE----NMIFDYDSIVPVIKSKLEGFNLENYKTF 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
VL CTH+P+ F+++ P VD +D S+ R + LL T +F
Sbjct: 180 VLGCTHFPIYRDAFKKVLPSFVDIIDGSEGTIRYLKRLLEERQLISTNADGGKVVFF 236
>gi|291458619|ref|ZP_06598009.1| glutamate racemase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291419152|gb|EFE92871.1| glutamate racemase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 279
Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 6/261 (2%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
E+ + I IFDSG+GG+ V++ ++ +P I+ D PYG ++ L
Sbjct: 12 RKAEEIRRAPIGIFDSGVGGISVVKALKRELPGEDLIFFGDSKNAPYGEKSVEEIRA-LS 70
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLI 123
L + VIACNTA + + LR P +G PA+K A + I
Sbjct: 71 ERSYQFLRGQRVKAVVIACNTATSAAAELLREENPGEIIVGMEPALKPAIENAGRERPEI 130
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T +TL L +H + + + VE +++ +
Sbjct: 131 LVLATSSTLGGERFHKLAARLGMGARVHSLPAPEIVRMVEAGREDSDEMRSYLRELLRPY 190
Query: 184 FIEKEGK---RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+G D +VL CTH+P R++ +PV D ++ AR + L +
Sbjct: 191 RRMADGTIRCPLDGLVLGCTHFPFAKRAIREVLSYPVPIYDGAEGTARETKHRLLQKALL 250
Query: 241 QTRVFDDHALFLSGKPDIAMR 261
R S PD +
Sbjct: 251 SDRKSGGCVRLYSSLPDTELE 271
>gi|294786553|ref|ZP_06751807.1| glutamate racemase [Parascardovia denticolens F0305]
gi|294485386|gb|EFG33020.1| glutamate racemase [Parascardovia denticolens F0305]
Length = 273
Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG+ V++++R MP+ I+ D PYG + + L F +D L K
Sbjct: 16 PIGVFDSGMGGISVVRQLRRDMPDQDIIFFGDSANAPYGTRPINEVTD-LSFAVADRLVK 74
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132
VIACNTA + LR + + +G PA+K A +S + + +T TL
Sbjct: 75 QGVKAIVIACNTATSACAPLLRRHY-DIPIIGMEPALKVAIDRGQGKSQHVLVTATKLTL 133
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ I L + VE G + + IE +
Sbjct: 134 EGRKFAALMDRERGNNIIETQPCPDLVTLVEADDLG---DRELVLSTIERYLRPFDLDSL 190
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D IVL CTH+ FR++ P +D + +R + +L R + L
Sbjct: 191 DSIVLGCTHFVFYRRYFREILPDYAAIIDGNQGTSRHVQEVLGYQGKSAERAAGKGTVIL 250
Query: 253 -SGKPDIAMRRLMQGF 267
+ K D LMQ
Sbjct: 251 QNSKTDPQTAALMQAL 266
>gi|269123416|ref|YP_003305993.1| glutamate racemase [Streptobacillus moniliformis DSM 12112]
gi|268314742|gb|ACZ01116.1| glutamate racemase [Streptobacillus moniliformis DSM 12112]
Length = 256
Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 13/258 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI IFDSG+GG+ VL ++R P+ + D PYG + K + +L K
Sbjct: 2 SIGIFDSGMGGITVLNEIRKQYPKLDIHFFGDTARLPYGEKSKEEIIKYSTEIVEFLLTK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ L V+ACNTA +L DE++ + ++ +G + A +S + +++T AT+
Sbjct: 62 -EVELIVVACNTATSLALDEIKEKY-NINIIGVIEAGVNGVINNKSKNVGLIATTATVNS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ ++ SQ I + +L +E + I + + K D
Sbjct: 120 KKYTQSLNFVNSQIKIIERACPLLVPTIENGNINGAYINELINEYVNH-----MSKEIDT 174
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF-LS 253
++L CTHY ++ + L ++ +D S I + ++ N + + + F +S
Sbjct: 175 LILGCTHYSILKETIKSLY-SNINIIDPSVEIVK----IINNNNLIKCKDENSKTFFYVS 229
Query: 254 GKPDIAMRRLMQGFGLKS 271
G L F ++S
Sbjct: 230 GSKLQFENNLKNIFSIES 247
>gi|255037214|ref|YP_003087835.1| glutamate racemase [Dyadobacter fermentans DSM 18053]
gi|254949970|gb|ACT94670.1| glutamate racemase [Dyadobacter fermentans DSM 18053]
Length = 269
Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 7/244 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGG+ V + L+P+ + IY D PYG+ A++ + + + +L
Sbjct: 5 SAPIGIFDSGIGGMTVASAVTKLLPQENTIYFGDTAHLPYGDKSTAAIQAYSIKICNMLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAV-PAIKQAAAYTQSGLISILSTPA 130
+ L +IACN+A + +R S A L + P + + + I ++ T
Sbjct: 65 -QQNCKLILIACNSASAAAYELVREYVGSKAKVLNVIDPVVDYVKEHYEGKTIGLIGTKQ 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + H+ +++ +LA +EE I E I +
Sbjct: 124 TVLSNVYKKKVDALDRNIHLKSLATPLLAPMIEEGFFDNNISE----SVIANYLSDASLD 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ ++L CTHYPLI R+ ++ LD S+ +AR + L + +
Sbjct: 180 GIEALILGCTHYPLIKTQIRKFYGEAIETLDTSEIVARSLKAWLEQHYLINEKGEGKRQF 239
Query: 251 FLSG 254
++S
Sbjct: 240 YVSD 243
>gi|303233055|ref|ZP_07319730.1| glutamate racemase [Atopobium vaginae PB189-T1-4]
gi|302480830|gb|EFL43915.1| glutamate racemase [Atopobium vaginae PB189-T1-4]
Length = 261
Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats.
Identities = 72/258 (27%), Positives = 116/258 (44%), Gaps = 10/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GG+ VL+++ LMP +F+Y+ D PYG+ + R + +++L
Sbjct: 5 RAPIGVFDSGVGGISVLKRLVELMPHENFVYMGDSAYNPYGSKTKQQIIDRSCTIVNELL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + D LR FP + +G PA+K A + ++ + +L+TPATL
Sbjct: 65 A-HSIKALVIACNTATSAASDYLRVQFPELPIIGIEPALKAALDHPKTMPVLVLATPATL 123
Query: 133 RRTYTSNLIHSYVSQ---CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
L H Q ++ + LA R+E+ + D++ +++ E G
Sbjct: 124 TLEKYQELEHKLGVQRNTSQVYRLGCKGLAHRIEQG----NLNADDLMQDLHTLLDEYRG 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ +VL CTHYP + + V D + AR +L
Sbjct: 180 V-VNSVVLGCTHYPFVKQHICDILG-DVPCYDGAIGTARHCLSVLSARGLLNPSEDAGTI 237
Query: 250 LFLSGKPDIAMRRLMQGF 267
FLS P A Q F
Sbjct: 238 EFLSSTPGAAQIAFYQSF 255
>gi|224282549|ref|ZP_03645871.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171]
gi|310287011|ref|YP_003938269.1| glutamate racemase [Bifidobacterium bifidum S17]
gi|311063884|ref|YP_003970609.1| glutamate racemase MurI [Bifidobacterium bifidum PRL2010]
gi|313139703|ref|ZP_07801896.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171]
gi|309250947|gb|ADO52695.1| glutamate racemase [Bifidobacterium bifidum S17]
gi|310866203|gb|ADP35572.1| MurI Glutamate racemase [Bifidobacterium bifidum PRL2010]
gi|313132213|gb|EFR49830.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171]
Length = 269
Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 99/267 (37%), Gaps = 18/267 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ V++++ MP +Y D PYG +++ + +
Sbjct: 5 APIGVFDSGLGGISVVRQIVQDMPHERVLYFGDSANAPYGTKTPQEVRRLSFDIMERFMS 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS------------- 120
+ VIACNTA + + LR + + +G PA+K A +
Sbjct: 65 QG-VKAVVIACNTATSAAVNALRDHY-DIPIIGMEPALKVACDRGDTAAGDGPAPARHMP 122
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ + +TP TLR + L+ + + I L VE G D + + +
Sbjct: 123 QHVIVAATPLTLREHKFAALMDRFKANNMISPQPCPDLVEIVES---GRLCDHDLVMRTL 179
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
F + D +VL CTH+ FR+L P +D + R +L +
Sbjct: 180 HRYFDGYDLPSIDSVVLGCTHFVFYRDYFRELLPSTTAIIDGNRGTVRHLGMVLESLGKL 239
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267
D + + L +
Sbjct: 240 APEEMDGGVEIANSDSGERIAALSREL 266
>gi|154501141|ref|ZP_02039179.1| hypothetical protein BACCAP_04830 [Bacteroides capillosus ATCC
29799]
gi|150269833|gb|EDM97368.1| hypothetical protein BACCAP_04830 [Bacteroides capillosus ATCC
29799]
Length = 259
Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 5/230 (2%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL ++++ LMPE +Y D PYG+ + K + L+ + VI
Sbjct: 1 MGGLTAVRELIHLMPEEDIVYFGDTGRVPYGSRSRDTIIKYARQDVA-FLNTFDLKAVVI 59
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
AC T T + L P + LG V PA+ +A A T+SG I ++ T AT+R I
Sbjct: 60 ACGTVSTTALEVLEQENP-IPVLGVVRPAVAEAVAATRSGKIGLIGTQATIRTGAYEKYI 118
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ + + + VE K E+ E + D +VL CTH
Sbjct: 119 AKLLPDAQVTARACPLFVPLVENGRFRPGDKVAEM--VAEEYLTPLKEAGVDTLVLGCTH 176
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
YPL+ V V ++ + AR+ +L + + + +
Sbjct: 177 YPLLSQVIGNFMGPDVKLINTGAACARQVAAMLKKRDGLNSPDHVGTRRY 226
>gi|299143433|ref|ZP_07036513.1| glutamate racemase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517918|gb|EFI41657.1| glutamate racemase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 278
Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 102/262 (38%), Gaps = 15/262 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I +FDSGIGGL VL++ ++ + FIY D PYG ++K F
Sbjct: 1 MRDSDRPIGVFDSGIGGLSVLKEAINILTDEKFIYFGDTARIPYGIRTPEEIEKFTEESF 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ L K +IACNTA + + F +G V P+ + T++ +++L+
Sbjct: 61 -EFLKKQGVKAGIIACNTATCYGLETVSKRF-DFPIIGVVTPSCEAVHKITENKNVALLA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + V L +E I ++ ++K IE E
Sbjct: 119 TQGTVNSKVYDEHFFDIDPFVDLRSVGCPDLVVAIENG----HIDDEYVEKIIEKYLNEI 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSDSIARRARCLLPRI-----NT 239
D ++L CTH+P ++ V+ +D + + A + +L + N
Sbjct: 175 NEFDYDTLILGCTHFPHARKAIERVLNKSNRKVNLVDPARTTALDLKAILEKEGLLKGNC 234
Query: 240 HQTRVFDDHALFLSGKPDIAMR 261
++ + + + +
Sbjct: 235 LESENDSKIVFYTTANIEKFKK 256
>gi|332978147|gb|EGK14883.1| glutamate racemase [Desmospora sp. 8437]
Length = 206
Score = 251 bits (643), Expect = 7e-65, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++I I DSG+GGL V++++ +P +Y D + PYG +++ + +
Sbjct: 7 ADSAIGILDSGVGGLTVVREVFRQLPNEKILYFGDTLRCPYGPRSSDEVRRFTLEIVRH- 65
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L Y VIACNTA L +E+R + LG + P + A ++ G + ++ T
Sbjct: 66 LSGYPLKALVIACNTATALALEEVRHQV-DVPVLGVIEPGARAAIKVSRRGRVGVIGTEG 124
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + + + ++ + L VE ++ +E +K + +
Sbjct: 125 TIRSSAYERALKRIDPRLYVVSLPCPALVPLVESG----GVENEESRKILRESLAPLKSH 180
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWP 216
R + ++L CTHYPLI + +
Sbjct: 181 RLESLILGCTHYPLIASMISREMGPG 206
>gi|294792937|ref|ZP_06758083.1| glutamate racemase [Veillonella sp. 6_1_27]
gi|294455882|gb|EFG24246.1| glutamate racemase [Veillonella sp. 6_1_27]
Length = 272
Score = 251 bits (643), Expect = 7e-65, Method: Composition-based stats.
Identities = 57/247 (23%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 11 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-YLACRIAETL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L VIACNT + D +R S+ +G +K A ++S I I++T AT+
Sbjct: 70 ERQPVKLMVIACNTFTVVALDAVRE-LVSVPVIGVSQGVKTAINKSKSKTIGIMATVATV 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ + + +++ + +
Sbjct: 129 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQG----HLDDYFVREVCKEYLEPLLSREI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251
+V+VL CTH+P + + +L+ + ++D + + R L N + L
Sbjct: 185 EVVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNPQDTVGTVTLC 244
Query: 252 LSGKPDI 258
+ ++
Sbjct: 245 FTKDVEL 251
>gi|307776633|pdb|3OUT|A Chain A, Crystal Structure Of Glutamate Racemase From Francisella
Tularensis Subsp. Tularensis Schu S4 In Complex With
D-Glutamate.
gi|307776634|pdb|3OUT|B Chain B, Crystal Structure Of Glutamate Racemase From Francisella
Tularensis Subsp. Tularensis Schu S4 In Complex With
D-Glutamate.
gi|307776635|pdb|3OUT|C Chain C, Crystal Structure Of Glutamate Racemase From Francisella
Tularensis Subsp. Tularensis Schu S4 In Complex With
D-Glutamate
Length = 268
Score = 251 bits (643), Expect = 7e-65, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K ++
Sbjct: 7 NRPIGVFDSGIGGLTIVKNLXSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D+ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 67 DQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDNLNTVGVIATPATI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE I E K+ + K
Sbjct: 124 NSNAYALQIHKKNPNIEVYSNPCGLFVSXIEEGFVSGHIVELVAKEYLSY----FHDKNI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 180 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKXLYSLLFENKLLNTTKSNPEYRFY 237
Query: 252 LSGKP 256
++ P
Sbjct: 238 VTDIP 242
>gi|289163917|ref|YP_003454055.1| glutamate racemase [Legionella longbeachae NSW150]
gi|288857090|emb|CBJ10905.1| putative glutamate racemase [Legionella longbeachae NSW150]
Length = 273
Score = 251 bits (643), Expect = 7e-65, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 10/251 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I +FDSG+GGL VL+ +R +P+ F+Y+ D PYG +K+ M + ++
Sbjct: 7 QLAIGVFDSGMGGLTVLRALREGLPQESFVYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPAT 131
++ VIACNTA T L+S P M L P A A T++ + +L+T T
Sbjct: 67 ERR-IKALVIACNTATTAALPYLQSMLPDMPVLGVVAPGAAAAVAATKNNHVIVLATETT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ LI + + I+ + +L + EE ++ + +K ++ E
Sbjct: 126 IASNAYQQLIAQQLPRAVINTRACSVLVALAEEGMINNQVAREALKYYLDDFTHE----- 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHA 249
D ++L CTH+P+ + + P V +D++ + A LL + + ++
Sbjct: 181 -DTVLLGCTHFPVFKSLLISILPEGVSIVDSAHATAIALYRLLEKQDLLNDVPSLYRRVT 239
Query: 250 LFLSGKPDIAM 260
++
Sbjct: 240 YLVTDSIKRFQ 250
>gi|313675673|ref|YP_004053669.1| glutamate racemase [Marivirga tractuosa DSM 4126]
gi|312942371|gb|ADR21561.1| glutamate racemase [Marivirga tractuosa DSM 4126]
Length = 270
Score = 251 bits (643), Expect = 7e-65, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 7/249 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K I IFDSGIGGL V K++ LMP +Y D PYG+ A++ +
Sbjct: 1 MTKDNSAPIGIFDSGIGGLTVAHKVKELMPNESMVYFGDIAHLPYGDKSAAAIQAYSIK- 59
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS--MAFLGAVPAIKQAAAYTQSGLISI 125
+D+L + L +IACN+A + + +R S F P ++ + + + +
Sbjct: 60 VTDVLLQQGCKLILIACNSASSAAFELVREYVGSKAKVFNVIDPVVEHVSQHYNKQKVGL 119
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+ T T+ + + + +++ +L +EE +I D IE
Sbjct: 120 IGTKQTVNSNAYESRLKQLNPDIELKSLATPLLVPMIEEGFFENRISHD----IIEAYLH 175
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
++ + + ++L CTHYPLI + + VD LD++ +A+R + L
Sbjct: 176 DEALEEIEALILGCTHYPLIKNEIDKFYGGKVDILDSATIVAKRLQQFLKEHTLLSENKI 235
Query: 246 DDHALFLSG 254
+S
Sbjct: 236 RKDRFLVSD 244
>gi|154174379|ref|YP_001408311.1| glutamate racemase [Campylobacter curvus 525.92]
gi|166231030|sp|A7GYL9|MURI_CAMC5 RecName: Full=Glutamate racemase
gi|112803185|gb|EAU00529.1| glutamate racemase [Campylobacter curvus 525.92]
Length = 266
Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 12/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL + +P F+Y AD PYG + K ++D+
Sbjct: 3 IGIFDSGLGGLSVLNEALKKLPNEEFLYYADRKNVPYGLKSKDEILKFSSHAVKFLIDQG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG------LISILSTP 129
VIACNTA + +ELR+ F + +G PA+K+AA + G +++TP
Sbjct: 63 A-NAIVIACNTATSAAINELRAKF-DLPIIGMEPAVKKAADLNREGENSASLRTLVIATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ LI S+ + +++ L E DE+K+ + F + +
Sbjct: 121 LTVQGAKLKELIERVDSEHLVDVLALPRLVEFAE----NENFACDEVKEYLREEFAKFKL 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ +VL CTH+ R++ P V +D ++ + L R+N +
Sbjct: 177 QNYCALVLGCTHFNYFKDSLREILPAGVSLIDGNEGTINKLISELSRLNLAHGKGQSVEY 236
Query: 250 LF 251
+
Sbjct: 237 FY 238
>gi|294795084|ref|ZP_06760219.1| glutamate racemase [Veillonella sp. 3_1_44]
gi|294454446|gb|EFG22820.1| glutamate racemase [Veillonella sp. 3_1_44]
Length = 272
Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + L ++ L
Sbjct: 11 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEIT-YLACRIAETL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K L VIACNT + D +R S+ +G +K A ++S I I++T AT+
Sbjct: 70 EKQPVKLMVIACNTFTVVALDAVRE-LVSVPVIGVSQGVKTAINKSKSKTIGIMATVATV 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ + + +++ + +
Sbjct: 129 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQG----HLDDYFVREVCKDYLEPLLSREI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251
+V+VL CTH+P + + +L+ + ++D + + R L N + L
Sbjct: 185 EVVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNPQDTVGTVTLC 244
Query: 252 LSGKPDI 258
+ ++
Sbjct: 245 FTKDVEL 251
>gi|148652096|ref|YP_001279189.1| glutamate racemase [Psychrobacter sp. PRwf-1]
gi|148571180|gb|ABQ93239.1| glutamate racemase [Psychrobacter sp. PRwf-1]
Length = 340
Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 14/269 (5%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I IFDSG+GGL V ++ +P+ HFIY AD + PYG +++ +
Sbjct: 28 PPSVSGPAPIGIFDSGVGGLSVYMHLKQALPQEHFIYYADTLNVPYGPRPSSEIQQLSLT 87
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
++ L VIACN+A R +P + +G VPA+K A + S +++L
Sbjct: 88 AVDWLVAAG-CKLVVIACNSASAHALHLARQKYPHIPIVGLVPALKPAVLNSTSKNVAVL 146
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+T ATL + +I Y + ++ L VE G+ + D + ++
Sbjct: 147 ATKATLDGPLLNTVIDEYARPSQVTVIKWFDPELVPWVE---AGMPMDSDTPMR-LKQQL 202
Query: 185 IEKEGKRTDVIVLACTHYPLIVH-VFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ ++ D +VL CTHYP V +++ + +D+ +IA R + LL + +
Sbjct: 203 YQFAQQQVDHLVLGCTHYPFFREFVLAEVAKQGLDIKVVDSGAAIAARVKALLQQQAAAE 262
Query: 242 TRVFD-DHALFLSGKPDIAMRRLMQGFGL 269
+ H L P ++ MQG +
Sbjct: 263 SSTARLGHKFLL---PTQSVLHSMQGLSV 288
>gi|227498833|ref|ZP_03928973.1| glutamate racemase [Acidaminococcus sp. D21]
gi|226904285|gb|EEH90203.1| glutamate racemase [Acidaminococcus sp. D21]
Length = 274
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 6/243 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL+ ++ MP FI++ D PYG+ + +R + +D L
Sbjct: 12 DRPIGVIDSGVGGLTVLKWLQKKMPHEQFIFIGDTARTPYGDRAREEI-QRFVKEMTDCL 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNT L D +R+ + +G T + + +T T+
Sbjct: 71 ARRKIKELVVACNTITVLGLDTIRNGY-DFDVIGMAKGASNIREVTHNNKVGFFATDFTV 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + L +E G ++ IK+ ++ +
Sbjct: 130 STGAHKREIERLDPGVEVFGLGCPKLVPLIESEKFGRPEMQEAIKEYVDA----MKVHGI 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L+CTHYP + V LD ++ A L +T +
Sbjct: 186 DTLLLSCTHYPFLHDEIAAAFGPQVTVLDPAEMTTDEAIKHLQNKGLLKTEGEGSLEVCF 245
Query: 253 SGK 255
+
Sbjct: 246 TAD 248
>gi|85708359|ref|ZP_01039425.1| glutamate racemase [Erythrobacter sp. NAP1]
gi|85689893|gb|EAQ29896.1| glutamate racemase [Erythrobacter sp. NAP1]
Length = 264
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 122/262 (46%), Gaps = 8/262 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ IL+FDSG+GGL V +R L+P+ IY AD G PYG + + R+ L
Sbjct: 2 NPSSPILLFDSGVGGLTVHAAVRKLLPDAPIIYAADLAGLPYGTKSEAEIAARVAGLLGR 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ ++YQP L IACNTA T+ +R + +G VPAIK A+A T++G I +L T A
Sbjct: 62 MSERYQPRLVCIACNTASTIALGMVRDVL-EVPIVGTVPAIKPASAITKTGTIGLLGTQA 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R+ Y NL + + + + L E G ++ I+ + G
Sbjct: 121 TVRQAYVDNLEAEFAADKRLLRHGASGLVRAAEAKLRGEEVDRSVIQSAVATLRAMDGGD 180
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ D +VLACTH+PL+ V ++D +D IARR L Q +
Sbjct: 181 QIDTVVLACTHFPLLTEELGAEFGDGVSFVDGADGIARRIAHL----TKGQAFDPAAPSF 236
Query: 251 FLSGKPDIAMRRLMQ---GFGL 269
+S RL Q +G
Sbjct: 237 AVSTGDLAQFERLSQTLHNYGF 258
>gi|270157815|ref|ZP_06186472.1| glutamate racemase [Legionella longbeachae D-4968]
gi|269989840|gb|EEZ96094.1| glutamate racemase [Legionella longbeachae D-4968]
Length = 271
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 10/251 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I +FDSG+GGL VL+ +R +P+ F+Y+ D PYG +K+ M + ++
Sbjct: 5 QLAIGVFDSGMGGLTVLRALREGLPQESFVYLGDTARLPYGTKSPDTVKQYAMQMAKLLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPAT 131
++ VIACNTA T L+S P M L P A A T++ + +L+T T
Sbjct: 65 ERR-IKALVIACNTATTAALPYLQSMLPDMPVLGVVAPGAAAAVAATKNNQVIVLATETT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ LI + + I+ + +L + EE ++ + +K ++G E
Sbjct: 124 IASNAYQQLIAQQLPRAVINTRACSVLVALAEEGMVNNQVAREALKYYLDGFTHE----- 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHA 249
D ++L CTH+P+ + + P V +D++ + A LL + + ++
Sbjct: 179 -DTVLLGCTHFPVFKSLLISILPEGVSIVDSAHATAIALYRLLEKQDLLNDVPSLYRRVT 237
Query: 250 LFLSGKPDIAM 260
++
Sbjct: 238 YLVTDSIKRFQ 248
>gi|303246204|ref|ZP_07332485.1| glutamate racemase [Desulfovibrio fructosovorans JJ]
gi|302492600|gb|EFL52471.1| glutamate racemase [Desulfovibrio fructosovorans JJ]
Length = 297
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 8/248 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P +Y D PYG + + + + +L K
Sbjct: 35 PIGIFDSGVGGLTVARAVMDRLPSESIVYFGDTARVPYGVKSPDTVARYAGQITNFLLAK 94
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L ++ACNT + + + P+ A A T++ I I++TP+T+
Sbjct: 95 -NVKLLIVACNTMAAVALPAITALSPAPVLEVISAGAASALAATRTKRIGIIATPSTIAS 153
Query: 135 TYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + + + VEE + + E + D
Sbjct: 154 RAYESALAALGGPEVFTASKACPLFVPLVEEGW----LAHPATRLVAEEYLTPLLAENLD 209
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALF 251
++L CTHYPL+ + +++ V D++ ++A RA +L + + H
Sbjct: 210 TLILGCTHYPLLAPLLAEVAGPDVRLQDSATAVAERAAAVLGYLGLAAPKGPDTPRHVFH 269
Query: 252 LSGKPDIA 259
++ P
Sbjct: 270 VTDMPRKF 277
>gi|296283687|ref|ZP_06861685.1| glutamate racemase [Citromicrobium bathyomarinum JL354]
Length = 264
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 1/223 (0%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
ILIFDSG+GGL +L ++R +P+ IY AD G PYG + + R+ L
Sbjct: 2 NPAAPILIFDSGVGGLTILAELRKTLPQAPVIYAADFAGLPYGTKSEAEVAARVCGLLGR 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ ++YQP L IACNTA T+ +R + +G VPAIK AA TQ+G+I +L T A
Sbjct: 62 MAERYQPRLICIACNTASTIALSMVRDVL-EVPIVGTVPAIKPAALATQTGVIGLLGTGA 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R+ Y L + + + +S L E G + E + + + G + + +
Sbjct: 121 TVRQPYVDRLEAEFAADKRLIRHASDALVPLAEAKMRGETLAEGAVAEAVAGLRDDPQAQ 180
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D +VLACTH+PL+ R + + +D + IARR L
Sbjct: 181 DLDTLVLACTHFPLLADELRAVFGQDIQLVDGAQGIARRIASL 223
>gi|253581900|ref|ZP_04859124.1| glutamate racemase [Fusobacterium varium ATCC 27725]
gi|251836249|gb|EES64786.1| glutamate racemase [Fusobacterium varium ATCC 27725]
Length = 263
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 11/260 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ SI +FDSG+GG VL+ M ++P + IY AD PYG L+ + L
Sbjct: 4 EYSIGVFDSGVGGTTVLKIMAEILPHENIIYYADSGNAPYGKKTVEELQSLCFNIMDFFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
K + VIACNTA ++ + + +G + P K AA +++G I++L+TP T
Sbjct: 64 -KNRCKAVVIACNTATAAALTAIKERY-DIPVIGVINPGAKAAANMSKNGHIAVLATPFT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I + ++ L + +EE + + D + I
Sbjct: 122 ANSNAYGEEIKKISKKVSVYQEGCSELCTMIEEGWENFENRGDILDGHISQF-----PGS 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D +VL CTHYP+I + +D + L + ++
Sbjct: 177 ADTLVLGCTHYPIIKEDIEKYFSG--KIVDPAKETVIELVEALRDDDLLNDSKDRGKIEF 234
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F+SG + + + G +
Sbjct: 235 FVSGNKEQFRKIAEKFLGFE 254
>gi|87199816|ref|YP_497073.1| glutamate racemase [Novosphingobium aromaticivorans DSM 12444]
gi|87135497|gb|ABD26239.1| glutamate racemase [Novosphingobium aromaticivorans DSM 12444]
Length = 277
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 87/254 (34%), Positives = 126/254 (49%), Gaps = 3/254 (1%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N +L+FDSG+GGL VL+K+R ++PE IYVAD+ G PYG + + R+
Sbjct: 9 NQAATVDPGAPLLLFDSGVGGLSVLRKVRAVLPEAPVIYVADNAGLPYGAKTEAQIAARV 68
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
L + ++ P L IACNTA T+ +R + +G VPAIK AAA T++G+I
Sbjct: 69 SGLLGRLTERLAPRLVCIACNTASTIALASVREVL-EVPIVGTVPAIKPAAALTRTGVIG 127
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L T AT+R+ Y L + + H+ + L + E G ++ +
Sbjct: 128 LLGTEATIRQAYVDRLEAEFAADKHLLRHGAPELVAAAEAKLRGERVDPAVYARAAAALR 187
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
G R D +VLACTH+PL+ R+ V ++D SD IARR L R
Sbjct: 188 AMPGGDRIDTVVLACTHFPLVEDELREAFGPEVRFVDGSDGIARRIAHL--TQGQAWRRT 245
Query: 245 FDDHALFLSGKPDI 258
D ALF G D+
Sbjct: 246 EPDLALFTRGGEDV 259
>gi|332665127|ref|YP_004447915.1| glutamate racemase [Haliscomenobacter hydrossis DSM 1100]
gi|332333941|gb|AEE51042.1| Glutamate racemase [Haliscomenobacter hydrossis DSM 1100]
Length = 267
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 6/251 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSGIGGL V + +P IY D PYG+ A++ + + +
Sbjct: 4 ASQPIGVFDSGIGGLTVANAIVKKLPNEEIIYFGDTAHLPYGDKSADAIRYYCLRISKFL 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAVPAIKQAAAYTQSGLISILSTPA 130
LD+ + V+ACN+A + D L F A F+ V + A A + +++T A
Sbjct: 64 LDQG-CKMIVVACNSASSAGYDVLLEFFRDQALFVNVVDPLVSAVAKRGFDKVGVIATKA 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +H ++ +++ +LA +EE + K ++
Sbjct: 123 TVQSGIYHKQLHRVSPTLNVESLATPLLAPMIEEGF----VHNQASKAILDMYLAHPGFV 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ ++LACTHYPLI V+ D++ +A L + H
Sbjct: 179 DIEALLLACTHYPLIRPEIDDYFQHQVEVFDSTRVVAEEVAFKLAQNGLLNPEKQHPHRF 238
Query: 251 FLSGKPDIAMR 261
++S
Sbjct: 239 YVSDYTKSFEE 249
>gi|124005254|ref|ZP_01690095.1| glutamate racemase [Microscilla marina ATCC 23134]
gi|123989076|gb|EAY28654.1| glutamate racemase [Microscilla marina ATCC 23134]
Length = 268
Score = 250 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N+I IFDSGIGGL V + +R L+P+ IY D PYG+ AL+ + + + +L
Sbjct: 4 SNAIGIFDSGIGGLTVARAVRQLLPQESIIYFGDTAHLPYGDKSTAALQAYAIKICNVLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPA 130
+ + ++ACN+A D ++ S A + P I + ++ T
Sbjct: 64 -QQNCKVILMACNSASVAAYDLVKEYVGSRAKVMNVIEPMINYINDVYAGKNVGLIGTKQ 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + +++ +L +EE I+ + IE +E +
Sbjct: 123 TILSNVYKKKVDQLGAGIDLRSLATPLLVPMIEENFFKNSIR----AEIIETYLSREELQ 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTHYPLI ++ V+ LD+S+ +A + +L N
Sbjct: 179 DIDALILGCTHYPLIKASIQKFYNTKVEVLDSSEIVASSLKGMLEMHNLTNKTGKVLQKF 238
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S FG
Sbjct: 239 YVSDFTQSFETSTQLFFG 256
>gi|206560649|ref|YP_002231414.1| glutamate racemase [Burkholderia cenocepacia J2315]
gi|198036691|emb|CAR52590.1| putative glutamate racemase [Burkholderia cenocepacia J2315]
Length = 285
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 11/257 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + +R + + +
Sbjct: 11 RAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFITERTLAI-GE 69
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA +R S+ +G P IK AAA + +G+ +L+T +
Sbjct: 70 WLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSATGVAGVLATQS 128
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL L+ Y + L +E ++ +E
Sbjct: 129 TLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALLERYIQPMLDD 184
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA- 249
D +VL CTHYP R L + +D SD+IAR+ +L HA
Sbjct: 185 GADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLRAP--AGTHAA 242
Query: 250 --LFLSGKPDIAMRRLM 264
F S + +R L
Sbjct: 243 PPRFCSTSDGLQLRALA 259
>gi|78043344|ref|YP_359176.1| glutamate racemase [Carboxydothermus hydrogenoformans Z-2901]
gi|123577026|sp|Q3AFA8|MURI_CARHZ RecName: Full=Glutamate racemase
gi|77995459|gb|ABB14358.1| glutamate racemase [Carboxydothermus hydrogenoformans Z-2901]
Length = 265
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 54/253 (21%), Positives = 105/253 (41%), Gaps = 15/253 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ VL+++ L+P +F Y+ D PYG+ L + L K
Sbjct: 8 IGIFDSGVGGVTVLKELINLLPGENFYYLGDTAHVPYGSKSKEELLILGDAIIRFFL-KL 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V ACNT+ + L+ +P + G + +++ + +L+T AT++
Sbjct: 67 GVKMVVFACNTSSAITLPILKERYPVL-MEGMLEPLRK--NMPAKAKVGVLATEATVKSG 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ +++++ +E+ K E+ ++ E E+ +
Sbjct: 124 LYQKKLMETNKFQEVYMIACPQYVPLIEKGIVSGKEVEEATREYFEPLLKEEVRD----V 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + ++L P + +D + +AR L N +++G
Sbjct: 180 VLGCTHYPFLTETIQKLYP-KIQVIDPAAYVAREVYRKLKE-NKLLGENGGKVQFYVTGD 237
Query: 256 PDIAMRRLMQGFG 268
+ ++ G
Sbjct: 238 -----EKSLKNLG 245
>gi|239944153|ref|ZP_04696090.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|239990608|ref|ZP_04711272.1| glutamate racemase [Streptomyces roseosporus NRRL 11379]
gi|291447623|ref|ZP_06587013.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|291350570|gb|EFE77474.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
Length = 277
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 96/259 (37%), Gaps = 8/259 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GGL V+ ++ L+P H IY+ D PYG ++K + ++
Sbjct: 6 APIGVFDSGFGGLTVVSALQRLLPSEHIIYLGDSARQPYGARRLAEVRKMSLECLDQLV- 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
VIACNTA + + R + PA + AA+ T++ + ++ T AT
Sbjct: 65 GLGVKAIVIACNTASAAVLRDARERYQVPVIEVVGPASRMAASATKNHSVGVVCTEATRV 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + VE E+ E D
Sbjct: 125 AKAYEDAFAA-APHIDLVTKACPAFVGFVEAGVT----TGPELVSVAEQYLTPLVEADID 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHALF 251
++L CTHYPLI + V + ++++ A+ L R N +
Sbjct: 180 TLILGCTHYPLISDAISGVMGERVALISSAEAAAQELAECLLRWNLCRPASGGRPSRLFL 239
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+G + R + GL
Sbjct: 240 TTGDIEHFERIGSRFLGLP 258
>gi|254292511|ref|YP_003058534.1| glutamate racemase [Hirschia baltica ATCC 49814]
gi|254041042|gb|ACT57837.1| glutamate racemase [Hirschia baltica ATCC 49814]
Length = 265
Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 6/259 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N +L+FDSG+GGL ++ +R +P+ Y AD FPYG D L+ RL L +++
Sbjct: 2 NRVLVFDSGVGGLSIVNSIREQIPDTIVDYAADAGFFPYGLKSDEELQARLPKLCKALIE 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K +P + V+ACNTA TL +R + +G VPAIK AA TQ+G I +L+TP T+R
Sbjct: 62 KAKPDIFVMACNTASTLSLASVREIV-DIPVVGTVPAIKPAAEITQTGTIGVLATPGTIR 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R Y +L + + + + L E + G + +D I F EG+ D
Sbjct: 121 RQYLDDLERQFAAHIKVVRHGTAGLVELAERHVRGEILSQDMFDNAISPLFSGAEGQNID 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVD-WLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
V+VLACTH+PLI ++ P V +D+ D+I R+ LL R ++ D + L
Sbjct: 181 VVVLACTHFPLIRDQIQKACPAYVTKLIDSGDAIGRQVGRLLVR--EKSSKKSPDACVLL 238
Query: 253 SG--KPDIAMRRLMQGFGL 269
+G A +++ FG
Sbjct: 239 TGGRANRDAYFPVLEKFGY 257
>gi|170733557|ref|YP_001765504.1| glutamate racemase [Burkholderia cenocepacia MC0-3]
gi|169816799|gb|ACA91382.1| glutamate racemase [Burkholderia cenocepacia MC0-3]
Length = 285
Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 105/257 (40%), Gaps = 8/257 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ +
Sbjct: 1 MTNPSHATAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + L + VIACNTA +R S+ +G P IK AAA + +
Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSAT 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G+ +L+T +TL L+ Y + L +E ++ +
Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALL 174
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E D +VL CTHYP R L + +D SD+IAR+ +L
Sbjct: 175 ERYIQPMLDDGADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLR 234
Query: 241 QT--RVFDDHALFLSGK 255
+
Sbjct: 235 APAGTHAAPPRFCSTSD 251
>gi|116626345|ref|YP_828501.1| glutamate racemase [Candidatus Solibacter usitatus Ellin6076]
gi|116229507|gb|ABJ88216.1| glutamate racemase [Candidatus Solibacter usitatus Ellin6076]
Length = 252
Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 17/246 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VLQ +R +P+ F+YV D PYG + + + +
Sbjct: 2 IGVFDSGVGGLTVLQALRKRLPQREFLYVGDTARAPYGRKPAAMVAGFACEIADYLCGRG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + EL + G V A ++ A T++G I +++T AT+
Sbjct: 62 -VEAIVVACNTASAVALPELERRCK-VPVWGVVDAGVEAATRMTRTGHIGVIATRATIAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + +L VEE + + + + G D
Sbjct: 120 AAYQRRLE--ARGLRVWARECPMLVHLVEEGLAESEEADVLSRHYLSG------RPEIDT 171
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ ++ + V +D++ A R + +G
Sbjct: 172 LILGCTHYPLLRASLQRAAGGHVRLVDSASVTAERVAA------AMTDEGNGRVTYYATG 225
Query: 255 KPDIAM 260
Sbjct: 226 DTKAFA 231
>gi|220903374|ref|YP_002478686.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867673|gb|ACL48008.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 311
Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 99/260 (38%), Gaps = 27/260 (10%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL VL+ + +P +Y+ D PYG + + + ++D
Sbjct: 8 PVGLFDSGMGGLTVLKALNHRLPGEDLLYLGDTARLPYGTKGPDTIVRYTLKAAQKLVD- 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA LR F + LG V P + AA +++G I +L T AT+
Sbjct: 67 MGVKMLVVACNTATAAALPALRQHFAPLPVLGVVEPGAQAAAQASRNGHIVVLGTEATIN 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR-- 191
I + + + + EE + E ++ +EG F +
Sbjct: 127 GGAYQQAIARIRPEAVVLGRACNLFVPLAEEGWMDGPLVEGVARRYLEGFFCAPDTNGAN 186
Query: 192 -----------------------TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
D ++L CTHYPL+ R + V +D++ A+
Sbjct: 187 GSNDAASTAQPRAAAGAANAPVQPDTLLLGCTHYPLLQGALRHVVGPDVRIVDSAAITAQ 246
Query: 229 RARCLLPRINTHQTRVFDDH 248
L R+ +
Sbjct: 247 VVAGELARLEMLHPDTREGT 266
>gi|162420811|ref|YP_001604760.1| glutamate racemase [Yersinia pestis Angola]
gi|165928375|ref|ZP_02224207.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936981|ref|ZP_02225547.1| glutamate racemase [Yersinia pestis biovar Orientalis str. IP275]
gi|166009624|ref|ZP_02230522.1| glutamate racemase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213755|ref|ZP_02239790.1| glutamate racemase [Yersinia pestis biovar Antiqua str. B42003004]
gi|167401233|ref|ZP_02306733.1| glutamate racemase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420886|ref|ZP_02312639.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425952|ref|ZP_02317705.1| glutamate racemase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270488739|ref|ZP_06205813.1| glutamate racemase [Yersinia pestis KIM D27]
gi|294505559|ref|YP_003569621.1| glutamate racemase [Yersinia pestis Z176003]
gi|162353626|gb|ABX87574.1| glutamate racemase [Yersinia pestis Angola]
gi|165915223|gb|EDR33834.1| glutamate racemase [Yersinia pestis biovar Orientalis str. IP275]
gi|165919605|gb|EDR36938.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991546|gb|EDR43847.1| glutamate racemase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205157|gb|EDR49637.1| glutamate racemase [Yersinia pestis biovar Antiqua str. B42003004]
gi|166961015|gb|EDR57036.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049258|gb|EDR60666.1| glutamate racemase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167055100|gb|EDR64899.1| glutamate racemase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|262363626|gb|ACY60347.1| glutamate racemase [Yersinia pestis D106004]
gi|262367556|gb|ACY64113.1| glutamate racemase [Yersinia pestis D182038]
gi|270337243|gb|EFA48020.1| glutamate racemase [Yersinia pestis KIM D27]
gi|294356018|gb|ADE66359.1| glutamate racemase [Yersinia pestis Z176003]
Length = 240
Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 72/236 (30%), Positives = 121/236 (51%), Gaps = 4/236 (1%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MP+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L
Sbjct: 1 MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 60
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T AT+ +YT +LI + + C I L+ S
Sbjct: 61 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGS 119
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + + +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 120 SELVEVAETKLHGGVVPLEVLKKILHPWLSMREP--PDTIVLGCTHFPLLTEELAQVLPE 177
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLK 270
+D+ +IARR L+ + ++ A ++ D A+ ++Q +G
Sbjct: 178 GTRMVDSGAAIARRTAWLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFP 233
>gi|332535187|ref|ZP_08410994.1| glutamate racemase [Pseudoalteromonas haloplanktis ANT/505]
gi|332035406|gb|EGI71906.1| glutamate racemase [Pseudoalteromonas haloplanktis ANT/505]
Length = 266
Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 123/257 (47%), Gaps = 10/257 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I++FDSGIGG VL+ ++ +P + Y D+ PYG + RL L I
Sbjct: 1 MSAHIMVFDSGIGGTTVLEHIKQSIPNAQYSYFMDNALLPYGAQSQQTIINRLCSLIHFI 60
Query: 72 LDK-YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA T +R + +G VPAIK AA T+S I +L+TPA
Sbjct: 61 KANTLNVDLIVIACNTASTSALSAVRQ-ITDIPIVGVVPAIKPAAELTRSNHIGLLATPA 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ +YT LI + ++L SS+ L + EE + +++ + ++ I K
Sbjct: 120 TVASSYTKTLIAEHARNVIVNLYSSVELVTLAEECFFTGSLDTNKLYQVLDELHI---DK 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDD 247
DV+VL CTH+P++ Q V LD+ +IA R LL ++N QT +
Sbjct: 177 TIDVLVLGCTHFPILAGPISQYFEGNVKLLDSGVAIANRVNFLLNQLNLCADKQTDIKKP 236
Query: 248 HALFLSGKPDIAMRRLM 264
+ + D+ +L
Sbjct: 237 LQYYATA--DVFSNKLA 251
>gi|307719381|ref|YP_003874913.1| glutamate racemase [Spirochaeta thermophila DSM 6192]
gi|306533106|gb|ADN02640.1| glutamate racemase [Spirochaeta thermophila DSM 6192]
Length = 286
Score = 249 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L DSGIGG+ L + F+YVAD FPYG L+ L+ L +D+L
Sbjct: 26 RPVLFLDSGIGGIPYLLWALEHIEGEEFVYVADRAHFPYGPRSHEELEAILVDLVADLLR 85
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+++P L V+ACNTA + LR+ + + F+G VPAIK AA+ T++G++ +L+T TLR
Sbjct: 86 RFRPKLVVLACNTASVVGLPALRARY-EIPFVGVVPAIKPAASLTRTGVVGLLATERTLR 144
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEGKR 191
YT LI +Y + + V S + VE +E +++ +E C +
Sbjct: 145 DFYTDELIAAYANGARVVKVPSPHIVEFVEHRFIDAAEEERRTAVREAVERCVA----QG 200
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D IVL CTH+ + R L+ V +D+ + + RR LL + + R + +
Sbjct: 201 ADTIVLGCTHFVFLEAQIRSLAGEHVQVIDSREGVGRRLVHLLSYLPCGR-RGPSTASFY 259
Query: 252 LSGK--PDIAMRRLMQGFGLK 270
L+G+ P+ R + +G+
Sbjct: 260 LTGRTPPEGRYVRFTRHYGVS 280
>gi|258405574|ref|YP_003198316.1| glutamate racemase [Desulfohalobium retbaense DSM 5692]
gi|257797801|gb|ACV68738.1| glutamate racemase [Desulfohalobium retbaense DSM 5692]
Length = 279
Score = 249 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 7/262 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ I +FDSG+GGL VL+++ ++P YVAD PYG + +++R + L
Sbjct: 7 ATSPMEGGIGVFDSGVGGLSVLKEIDRVLPHEDLWYVADSAEAPYGEKSEEEIRQRSLEL 66
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++ + L VIACNTA +ELR+ P + PA+K A A + SG I +L+
Sbjct: 67 ARFLVQRGAKAL-VIACNTATAAAAEELRAQCPVPV-VAVEPAVKPAVALSCSGCIGVLA 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TL+ L+ Y + + + L RVE + + ++
Sbjct: 125 TTGTLQSKRFQALLKRYAGSAEVAVQACPGLVERVEMGDLDGPVTRVLLGSYVQA----L 180
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
+ D +VL CTHYP + + R + LD ++AR L R+ +
Sbjct: 181 AERGADTLVLGCTHYPFLRPLVRDCIGETMPVLDTGLAVARHLHSELRRLELERPAARQG 240
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+ +G+P L + +G
Sbjct: 241 QRRFWTTGEPARCESVLGRLWG 262
>gi|319948539|ref|ZP_08022670.1| glutamate racemase [Dietzia cinnamea P4]
gi|319437786|gb|EFV92775.1| glutamate racemase [Dietzia cinnamea P4]
Length = 293
Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 97/245 (39%), Gaps = 9/245 (3%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86
V + + +P+ +YV D PYG ++ + + ++D+ L VIACNT
Sbjct: 43 TVARAIVDQLPDESVVYVGDTAHGPYGPLPLAQVRAHALAVADQLVDRGVKAL-VIACNT 101
Query: 87 AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
A + + R +P PA ++A A T+SG I +++T AT+ + + +
Sbjct: 102 ASAAMLRDARERYPVPVVEVIQPAARRAVATTRSGRIGVIATRATVAS-RAYDDAVAAAA 160
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ V+ VE + ++ E D +VL CTHYPL+
Sbjct: 161 GIELTSVACPKFVEFVERGITSGR----QVLGLAEAYLAPIRDADVDTLVLGCTHYPLLS 216
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDHALFLSGKPDIAMRRL 263
V + + V + +++ A+ +L + H ++G PD R
Sbjct: 217 GVVQLAAGDHVTLVSSAEETAKDVLRVLTAEDLLRPHDPADPPTREYLVTGDPDAFRRVA 276
Query: 264 MQGFG 268
+ G
Sbjct: 277 SRFLG 281
>gi|315125844|ref|YP_004067847.1| glutamate racemase [Pseudoalteromonas sp. SM9913]
gi|315014358|gb|ADT67696.1| glutamate racemase [Pseudoalteromonas sp. SM9913]
Length = 262
Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats.
Identities = 78/245 (31%), Positives = 117/245 (47%), Gaps = 6/245 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I++FDSGIGG VL+ ++ +P + Y D+ PYG + RL L I
Sbjct: 1 MSAHIMVFDSGIGGTTVLEHIQQSIPHAQYSYFMDNALLPYGAQSQQTIIHRLCGLIQFI 60
Query: 72 LDK-YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
D+ L VIACNTA T +R + +G VPAIK AA TQS I +L+TPA
Sbjct: 61 EDESLNVDLIVIACNTASTSALSSVRQ-ITDIPIVGVVPAIKPAAQLTQSKHIGLLATPA 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ YT LI + S L SS+ L + E + D++ E++ K
Sbjct: 120 TVSSPYTDALIKEHASSITTSLYSSVELVTLAETLFFTQHLDIDKLHTELDRL---NINK 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
DV+VL CTH+P++ V LD+ +IA+R LL +++ +Q +
Sbjct: 177 DIDVLVLGCTHFPILAKPISDYFNTQVQLLDSGAAIAKRVSSLL-KLSDNQAGIKKPLHY 235
Query: 251 FLSGK 255
+ +
Sbjct: 236 YATAD 240
>gi|311693694|gb|ADP96567.1| glutamate racemase [marine bacterium HP15]
Length = 277
Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 13/262 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + +P +Y+AD+ GFPYG + + R L + L+ Y
Sbjct: 1 MFDSGVGGLSVAACIHRQLPGLEIVYLADNAGFPYGEKSEAVVIDRCCSLITRALELYPS 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA T++ LR+ ++ +G VPAIK AAA + + + +L+TPAT+RR Y
Sbjct: 61 DAIVVACNTASTVVLPHLRAM-TAVPVVGVVPAIKPAAAKSVNRRMGLLATPATVRRPYL 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ + C I + L E+ GI++ E+ + D +VL
Sbjct: 120 DRLVEEFAGDCRIERIGHPGLVRWAEDLVSGIEVP----LAELSEAMRPFKEAGVDTVVL 175
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--------QTRVFDDHA 249
CTHYPL++ R P W+D+ ++IARR LL + A
Sbjct: 176 GCTHYPLLLESLRASLPTVRFWVDSGEAIARRVAWLLEQTGRLDVAQGPVASAGKQPVSA 235
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
SG + M G GL++
Sbjct: 236 ALFSGPAPKGIAPFMAGLGLEA 257
>gi|120555141|ref|YP_959492.1| glutamate racemase [Marinobacter aquaeolei VT8]
gi|120324990|gb|ABM19305.1| glutamate racemase [Marinobacter aquaeolei VT8]
Length = 281
Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats.
Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 6/237 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V + +P +Y+AD+ GFPYG+ + + +R L L
Sbjct: 5 RPRVLVFDSGVGGLSVAACIHQTLPGAELVYLADNAGFPYGDKPEQVVIERCCTLIRQCL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + V+ACNTA T++ ELR+ +G VPA+K AAA + + I +L+TPAT+
Sbjct: 65 AQFPCDVVVVACNTASTVVLPELRANIAVPV-VGVVPAVKPAAACSVNRRIGLLATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R Y +LI + C + + L EE G D++ E++G +
Sbjct: 124 KRAYLDDLIQKFARDCEVVRLGHPALVRWAEELVGGS--APDQV--EVDGAMVPLREAGV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDH 248
D +VL CTHYPL++ R+ P + W+++ ++IARR + + +H
Sbjct: 180 DTVVLGCTHYPLLLPWLRKALPEVMHWVESGEAIARRVAWWFEQAGDLACAQTPPNH 236
>gi|224543164|ref|ZP_03683703.1| hypothetical protein CATMIT_02364 [Catenibacterium mitsuokai DSM
15897]
gi|224523951|gb|EEF93056.1| hypothetical protein CATMIT_02364 [Catenibacterium mitsuokai DSM
15897]
Length = 264
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 6/250 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GG+ VLQ + +MP + + D + PYG +++ + +
Sbjct: 11 KKEEYIGVFDSGVGGVSVLQAIHEMMPGENLYFFGDSLNAPYGEKTLEDVQQLTLNAIEN 70
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ K VIACNTA + LR + + +G PA+K AA ++ I +++T
Sbjct: 71 MNKKKHLKAIVIACNTATSAAVTLLREKYTDIPVIGIEPALKPAALSKKNSCILVMATAN 130
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR L Y I V LA R+E+ + E ++ + + +GK
Sbjct: 131 TLRLDKFHQLAERYDKSATIIPVPCYGLAKRIEQG----NLDEPDLIELLTDLIGPYKGK 186
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + + + D + ++ L + + D
Sbjct: 187 -VDSVVLGCTHYPFVKDQIATVLG-DIPMFDGAYGTSKHLYNCLKECDCLNDQKEGDILY 244
Query: 251 FLSGKPDIAM 260
S + +I +
Sbjct: 245 GSSKEDEIPI 254
>gi|107028624|ref|YP_625719.1| glutamate racemase [Burkholderia cenocepacia AU 1054]
gi|116690217|ref|YP_835840.1| glutamate racemase [Burkholderia cenocepacia HI2424]
gi|105897788|gb|ABF80746.1| glutamate racemase [Burkholderia cenocepacia AU 1054]
gi|116648306|gb|ABK08947.1| glutamate racemase [Burkholderia cenocepacia HI2424]
Length = 285
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 105/257 (40%), Gaps = 8/257 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ +
Sbjct: 1 MTNPSHAIAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + L + VIACNTA +R S+ +G P IK AAA + +
Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSAT 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G+ +L+T +TL L+ Y + L +E ++ +
Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRTLL 174
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E D +VL CTHYP R L + +D SD+IAR+ +L
Sbjct: 175 ERYIQPMLDDGADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLR 234
Query: 241 QT--RVFDDHALFLSGK 255
+
Sbjct: 235 APAGTHAAPPRFCSTSD 251
>gi|332184267|gb|AEE26521.1| Glutamate racemase [Francisella cf. novicida 3523]
Length = 265
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K ++
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLINILPNEDIIYFGDIARIPYGTKSRAMIQKFAAQTAKFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 64 EQ-EVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAG--VSLVDSLSKVGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE +I E K+ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGQIVELVAKEYLSY----FHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL ++ ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFDNKLLNRANSNPEYRFY 234
Query: 252 LSGKP 256
++ P
Sbjct: 235 VTDIP 239
>gi|257464953|ref|ZP_05629324.1| glutamate racemase [Actinobacillus minor 202]
gi|257450613|gb|EEV24656.1| glutamate racemase [Actinobacillus minor 202]
Length = 253
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 6/251 (2%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL + ++R ++P H++Y D+ FPY + AL +R + + I +K L V+
Sbjct: 1 MGGLTIYDEVRKVLPNAHYLYCFDNAFFPYSERSEQALIERAVKIVQKIAEKQPLDLVVV 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA T++ LR F +G VPAIK AAA +++ I +L+T T++R Y +LIH
Sbjct: 61 ACNTASTVVLPALREHF-DFPIVGTVPAIKPAAAISKTKTIGLLATVGTIKRPYVLDLIH 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
Y C + + + + E + +K+ +E D ++L CTH+
Sbjct: 120 RYAKDCQVEKIGNTQIVELAETKLLTGTVDLPSLKECVEPWL---NHPSLDTVILGCTHF 176
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
PL+ +QL P ++D+ ++IA+R + LL + H ++ F + + R
Sbjct: 177 PLLKEELKQLLPQVTYFVDSGEAIAKRVQSLLLENHHHSQEKERENTAFCTELTENFKNR 236
Query: 263 --LMQGFGLKS 271
+M G KS
Sbjct: 237 EVMMHKLGFKS 247
>gi|254302994|ref|ZP_04970352.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148323186|gb|EDK88436.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 264
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I IFDSG+GG VL++M +P +IY D+ FPYG+ + L+K + +
Sbjct: 6 QKIGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
K L ++ACNTA T D LR F S+ +G V A +K A+ T++ I+++ST T
Sbjct: 66 -KNNCKLVIVACNTASTAAIDYLREKF-SLPIIGIVEAGVKIASKTTKNKNIAVISTKFT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
N S+ ++ ++ + A +E +KE+ ++ + K
Sbjct: 124 AESHGYKNKAKMLDSELNVKEIACIEFAQMIESGWDTFDN-----RKELLNKYLSEIPKN 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
TD +VL CTHYPLI + + +D + I RA L +N +
Sbjct: 179 TDTLVLGCTHYPLIRKDIEKNI--KIKVVDPAVEIVERATQTLTTLNLLNDKKEKGKVIF 236
Query: 251 FLSGK 255
F++G+
Sbjct: 237 FVTGE 241
>gi|220930761|ref|YP_002507670.1| glutamate racemase [Clostridium cellulolyticum H10]
gi|220001089|gb|ACL77690.1| glutamate racemase [Clostridium cellulolyticum H10]
Length = 258
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 6/237 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I DSG GG+ VL + +P+ ++IY AD PYG +++ + ++ +
Sbjct: 6 IGFLDSGFGGITVLSEALRQLPKENYIYYADIEHVPYGTKTKEEVRQYVFQAVEFMVSQG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ ELR+ + LG PA+K A + +L+T TLR
Sbjct: 66 -IKALVVACNTATSIAVRELRNMY-EFPILGMEPAVKPAVQNGNGKRVLVLATALTLREE 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL+ + + + L E + IKK+++G +
Sbjct: 124 KFHNLVQRVDQEHVVDYLPFPELVELAENMVFDYEKVIPVIKKKLDGYNL----NNYKTF 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
VL CTH+P+ ++ F+++ P +D +D S+ R + LL + T + + +F
Sbjct: 180 VLGCTHFPIYINAFKEVLPPFIDIIDGSEGTIRYLKLLLEERHLISTNINGGNIVFF 236
>gi|254247709|ref|ZP_04941030.1| Glutamate racemase [Burkholderia cenocepacia PC184]
gi|124872485|gb|EAY64201.1| Glutamate racemase [Burkholderia cenocepacia PC184]
Length = 285
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 106/257 (41%), Gaps = 8/257 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ++ + + IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ +
Sbjct: 1 MTNPSHATAPRAAAPVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + L + VIACNTA +R S+ +G P IK AAA +++
Sbjct: 61 TERTLAI-GEWLAREGAKALVIACNTATARAIAAIRECL-SIPLVGVEPGIKPAAALSET 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G+ +L+T +TL L+ Y + L +E ++ +
Sbjct: 119 GVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALL 174
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E D +VL CTHYP R L + +D SD+IAR+ +L
Sbjct: 175 ERYIQPMLDDGADTLVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLR 234
Query: 241 QT--RVFDDHALFLSGK 255
+
Sbjct: 235 APAGTHAAPPRFCSTSD 251
>gi|88810229|ref|ZP_01125486.1| glutamate racemase [Nitrococcus mobilis Nb-231]
gi|88791859|gb|EAR22969.1| glutamate racemase [Nitrococcus mobilis Nb-231]
Length = 284
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL V+ +R L+P +YVAD PYG ++ R + L +
Sbjct: 6 DDPIGIFDSGLGGLSVVHAIRRLLPTEQLLYVADCAHAPYGGCSAAFIRTRALALAGFLQ 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA + LR F + + PA+K+AAA T+ ++ +L+T TL
Sbjct: 66 TQRAKAL-VVACNTATAAAAEALRRQF-ELPIIAMEPAVKRAAAATRCNVVGVLATEGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ + + + L VE +I E + +E + +
Sbjct: 124 ASARFAGLLARFAGAVQVVTRPAPDLVLLVERG----EIDGIEAMRRVEAHVSYLLHQGS 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D IVL CTHYP + + + + + +D ++AR R L + ++
Sbjct: 180 DTIVLGCTHYPHLRPLIERAAGPEIAIIDTGPAVARELRRRLEEKDLVRSSAGGGLIRIW 239
Query: 253 SGKPDIAMRRLMQGF 267
+ + R + Q
Sbjct: 240 TSATTSSARAIAQRL 254
>gi|144900285|emb|CAM77149.1| Asp/Glu racemase [Magnetospirillum gryphiswaldense MSR-1]
Length = 284
Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats.
Identities = 63/257 (24%), Positives = 103/257 (40%), Gaps = 4/257 (1%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N I +FDSG+GGL V + +P +Y+ D PYG + + +
Sbjct: 10 NTLEHMNCTRPIGVFDSGVGGLTVAAALHRRLPAETLLYLGDVARLPYGTKAPQTIIQYV 69
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLI 123
+ + + + V+ACNTA L FP + LG + A +QAAA + G I
Sbjct: 70 LRAAAFF-RSHDIKMLVLACNTASAHAAAALAQHFPDLLVLGVIDAGAEQAAAQSPGGRI 128
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+ +T T R I + I V + + VEE I E I++ +
Sbjct: 129 VVAATEGTCRSGAFDRAIAVHRPTAAITPVPCPLFVALVEEGLTEGPIAEAMIRQYLAEH 188
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
F + D +VL CTH+PL+ R++ +D + ++A RA +L +
Sbjct: 189 F--QGDGAADCLVLGCTHFPLLAPSLRKVLGPIPVLVDCAQAVAERAALMLAQKGLAAGS 246
Query: 244 VFDDHALFLSGKPDIAM 260
L+ + P
Sbjct: 247 GKGGIHLYTTDAPTRFS 263
>gi|319942509|ref|ZP_08016819.1| hypothetical protein HMPREF9464_02038 [Sutterella wadsworthensis
3_1_45B]
gi|319803912|gb|EFW00830.1| hypothetical protein HMPREF9464_02038 [Sutterella wadsworthensis
3_1_45B]
Length = 271
Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 15/263 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG GGL V + +R +P ++ AD PYG+ ++ RL + S +L
Sbjct: 4 NRPIGILDSGFGGLSVARAIRAAIPNEDLVFAADCAYAPYGDNSSEYIQARLEHVVSFLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V ACNTA + R+ SM +G PA+ A +T++G I +L+T T+
Sbjct: 64 AQQVKAL-VFACNTATAVGIRAFRARL-SMPIIGIEPAVFPALRHTRTGHIGVLATCRTI 121
Query: 133 RRTYTSNLIHSYVS--------QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+++ H + + V L VE + + +
Sbjct: 122 ESQKYADVRHRAIEWAEVSRPMPVTVWDVPCPGLMECVERG----DFDSANVHELLVRYV 177
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
D IVL CTHYP + + + +P +D + ++A++ L ++ +
Sbjct: 178 DPLTAHNVDEIVLGCTHYPFLANAIAKHAP-KATLIDPAPAVAQQLERRLAALDLATPQT 236
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
F + D A +++
Sbjct: 237 APGTERFFASGADAAREAVLRTL 259
>gi|227824990|ref|ZP_03989822.1| glutamate racemase [Acidaminococcus sp. D21]
gi|226905489|gb|EEH91407.1| glutamate racemase [Acidaminococcus sp. D21]
Length = 274
Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 6/251 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
Q I + DSG+GGL VL++++ LMP HFI++ D + PYGN + RL+ +D
Sbjct: 2 NKQQPIGVIDSGVGGLTVLRRLQELMPHEHFIFLGDTLNTPYGNRSREDII-RLVNQMTD 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L V ACNT L ++ +R+ +G K T++G I I++T
Sbjct: 61 YLSYRNIKALVAACNTITVLGEETIRNGH-DFEVIGMAKGSKMIPRVTKTGRIGIMATDF 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ I + + + V L +E + E+K I+ +
Sbjct: 120 TISTGAHKKEIQAAHPEYQVFGVGCPRLVPLIEH----EQFGTAELKDAIKEYTDILKSH 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L+CTHYP + V LD ++ A++ R L + +
Sbjct: 176 DVDTVMLSCTHYPFLKKEIEAAMGPAVTVLDPAEVTAKKCRYDLCERDLLCKTGTGTTEI 235
Query: 251 FLSGKPDIAMR 261
+ + +R
Sbjct: 236 CFTTDLERGLR 246
>gi|258542160|ref|YP_003187593.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01]
gi|256633238|dbj|BAH99213.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01]
gi|256636297|dbj|BAI02266.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-03]
gi|256639350|dbj|BAI05312.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-07]
gi|256642406|dbj|BAI08361.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-22]
gi|256645461|dbj|BAI11409.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-26]
gi|256648514|dbj|BAI14455.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-32]
gi|256651567|dbj|BAI17501.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654558|dbj|BAI20485.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-12]
Length = 289
Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats.
Identities = 101/278 (36%), Positives = 148/278 (53%), Gaps = 11/278 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M+ID P L++ IL FDSGIGGL +++ ++ L P+ Y+AD FPYG +D L
Sbjct: 1 MQIDG-PALSGLRH-ILAFDSGIGGLGIVRAIQALAPDICIDYLADTAIFPYGEQDDDFL 58
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ L S + + QP V+ACNTA TL + LR+ +P M F+G VP I+ AA TQ+
Sbjct: 59 IERIVSLLSQAIRRLQPQAVVVACNTASTLALEALRAAWPDMPFVGCVPPIRWAARITQT 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+I +L+T AT+RR Y S L Y +C + ++ LA E G + + I +EI
Sbjct: 119 KVIGLLATRATVRRPYLSRLHALYAPECTLIAHAAPGLAGCAELAFRGQDVPDSTILQEI 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
EG F+ + R D + L CTHY ++ R LSP + WLD + ++AR LL +
Sbjct: 179 EGLFVHPDSNRLDAVGLGCTHYTFVLDRLRALSPPGLTWLDPAPAVARHTCNLLAHLPQK 238
Query: 241 Q--------TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
T + DD ALF KP + G+
Sbjct: 239 AHAHPCAWFTALPDDQALFTHLKPYRFSAAAL-WEGVN 275
>gi|326790779|ref|YP_004308600.1| glutamate racemase [Clostridium lentocellum DSM 5427]
gi|326541543|gb|ADZ83402.1| glutamate racemase [Clostridium lentocellum DSM 5427]
Length = 253
Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 6/240 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GG+ VL+ L+P+ +IY +D+ PYG + + + + ++ +
Sbjct: 3 VGIFDSGVGGITVLKTALKLLPQVDYIYYSDNNHVPYGTKTKEEVLGYVNDVVAFLISQ- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q VIACNTA ++ LRS +P + +G PA+K A + G + + +T TL+
Sbjct: 62 QVDAIVIACNTATSIAVKTLRSRYP-VPIIGMEPAVKLAFNHHSDGKVLVTATSLTLKEE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL++ + + ++ L + E + E +IK + + + I
Sbjct: 121 KFKNLVNRLGEEERVCTLALPELVTFAEAFM----FDEAQIKAYFKEKLKDYPLEEIVAI 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ + ++ P + D ++ R + L+ R + + SGK
Sbjct: 177 VLGCTHFVYFKKILKECLPPHITVYDGNEGTIRHLKELIDSEKVMHIRKEPEVTFYYSGK 236
>gi|302335208|ref|YP_003800415.1| glutamate racemase [Olsenella uli DSM 7084]
gi|301319048|gb|ADK67535.1| glutamate racemase [Olsenella uli DSM 7084]
Length = 257
Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 64/252 (25%), Positives = 95/252 (37%), Gaps = 7/252 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GG+ VL+ + +P F Y D PYG + + D+ +
Sbjct: 8 VGVFDSGVGGISVLRHLVDELPHEDFCYFGDSANNPYGGKTPDEILSLSRGIVDDMAARG 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA ++ LR +P + +G PAI+ A + I +++T TL
Sbjct: 68 A-KAVVIACNTATSVAAARLRLEYPDLPIVGVEPAIRPATRAPRHERILVMATQVTLALD 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L S I + LA R+E+ I+ + D +
Sbjct: 127 KYHRLAEECGSSSQILGEPCVGLAHRIEQGNLDAPDLHGLIETLVGRY-----RGTVDSV 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + R + V D ARR R LL + F S
Sbjct: 182 VLGCTHYPFVRAQIRDVVG-DVPLFDGGTGAARRLRSLLAERDLLAEGDAPGSVAFASSL 240
Query: 256 PDIAMRRLMQGF 267
L + F
Sbjct: 241 RGPGQLDLYERF 252
>gi|295132492|ref|YP_003583168.1| glutamate racemase [Zunongwangia profunda SM-A87]
gi|294980507|gb|ADF50972.1| glutamate racemase [Zunongwangia profunda SM-A87]
Length = 263
Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 66/246 (26%), Positives = 116/246 (47%), Gaps = 8/246 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+NSI IFDSGIGG + +++ L+P +Y+AD PYG + + +L
Sbjct: 3 KNSIGIFDSGIGGTSIWREIHELLPFEDTVYLADSFNAPYGIKTREEIIELSRKNTIKLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA T +ELR+ F ++F+G PAIK AA +++ I IL+T TL
Sbjct: 63 E-LGAKIIVVACNTATTNAINELRNEF-DVSFIGIEPAIKPAALQSRTKNIGILATKGTL 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + Y + V L +E KI E+ ++ +
Sbjct: 121 SSSLFTKTSDLYTQGLKVIEVEGNGLVELIEAG----KIYSTEMDLLLDQLLAPLISQPI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHAL 250
D +VL C+HYP ++ ++ + +D+ +++AR+ + +L + N T +
Sbjct: 177 DYLVLGCSHYPYLIPRLKEKFHPALSIIDSGEAVARQTKAILEKENLLNTDFQQKGTCTF 236
Query: 251 FLSGKP 256
+ + P
Sbjct: 237 YTNYDP 242
>gi|182416025|ref|YP_001821091.1| glutamate racemase [Opitutus terrae PB90-1]
gi|177843239|gb|ACB77491.1| glutamate racemase [Opitutus terrae PB90-1]
Length = 285
Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 23/273 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL + +P Y ++++AD PYG + + + + D+
Sbjct: 2 IGVFDSGFGGLTVLASLLKTLPRYDYLFLADSARAPYGARSADVINEFTLEAVEWLFDQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAV-PAIKQAAAYT----------- 118
P L V+ACNTA L+ P LG V P+++ A
Sbjct: 62 CP-LVVLACNTASARALRNLQQLHLPAHRPDRRVLGVVRPSVEALAGLPPGAIPGETAPS 120
Query: 119 -QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+G +++L T +T+ + + + + VE E ++
Sbjct: 121 LATGTVAVLGTASTIASDSYAIELQKLAPGLTLIQQPCPMWVPLVEAGELDGPGAEYFLR 180
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
+ +E ++L CTHYPL++ R+L P V+ LD + +A R L R
Sbjct: 181 RSLEPVL--NRAPLPQRLLLGCTHYPLLLPAIRRLVPASVEILDQGEIVATRLADWLQRH 238
Query: 238 NTHQTRVFDD--HALFLSGKPDIAMRRLMQGFG 268
H+ R+ + + P +R + G
Sbjct: 239 RDHEARLTRNGTRRFVTTDDPAWFAQRGEKLLG 271
>gi|225619324|ref|YP_002720550.1| glutamate racemase [Brachyspira hyodysenteriae WA1]
gi|225214143|gb|ACN82877.1| glutamate racemase [Brachyspira hyodysenteriae WA1]
Length = 279
Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 19/266 (7%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ID+ I +FDSG+GGL VL+K+ +MP +++Y+ D+ PYG+ +
Sbjct: 1 MNIDSL----SSNMPIAVFDSGLGGLTVLKKLIEMMPNENYVYIGDNANIPYGDKSKEEI 56
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQ 119
+ + ++++ + +IACNT D L+ + + + + A+ A T+
Sbjct: 57 INLTLKMTDFLVEQK-CKMIIIACNTITACSYDILKQKY-HIPVIEVISNAVIDALDKTK 114
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ ISI++T T+ N I + Q + + L +E + + + +K
Sbjct: 115 NNNISIMATEFTVNSNIYKNKIIEFNKQAKVTQTACKDLCPMIENDWYSYENRLEILKNY 174
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS-----PWPVDWLDNSDSIARRARCLL 234
+E K +D ++L CTHYP I++ ++L + +D S A A+ L
Sbjct: 175 LEN-----IDKNSDTLILGCTHYPHIINDIKKLLENGIINSINNIIDPSYHTAISAKEYL 229
Query: 235 PRINTHQTRVFDDHA--LFLSGKPDI 258
N ++ +F + K +
Sbjct: 230 KNNNLLSDNKIENSKTIIFSTEKSEK 255
>gi|77359223|ref|YP_338798.1| glutamate racemase [Pseudoalteromonas haloplanktis TAC125]
gi|76874134|emb|CAI85355.1| glutamate racemase [Pseudoalteromonas haloplanktis TAC125]
Length = 265
Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats.
Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 8/248 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I++FDSGIGG VL+ ++ +P+ + Y D+ PYG + RL L I
Sbjct: 1 MSAHIMVFDSGIGGTTVLEHIQQSIPDAQYSYFMDNALLPYGAQSQQTIINRLCALIHFI 60
Query: 72 LDK-YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L VIACNTA T +R ++ +G VPAIK AA TQS I +L+TPA
Sbjct: 61 NQQALNVDLIVIACNTASTSALGAVRQ-ITTIPIVGVVPAIKPAAQLTQSKHIGLLATPA 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ YT LI + + + L SS+ L + E + ++ +E++ +
Sbjct: 120 TISSPYTRTLIQEHTNNIAVSLYSSVELVTLAERLFFEQSLDTTKLHQELDRL---NIDQ 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA- 249
DV+VL CTH+P++ Q V LD+ +IA+R L+ ++N + D
Sbjct: 177 SIDVLVLGCTHFPILAEPISQYFNRKVQLLDSGAAIAKRVHYLISQLNLTNNNIADTKKP 236
Query: 250 --LFLSGK 255
+ +
Sbjct: 237 LQYYATAS 244
>gi|167755834|ref|ZP_02427961.1| hypothetical protein CLORAM_01350 [Clostridium ramosum DSM 1402]
gi|237734803|ref|ZP_04565284.1| glutamate racemase [Mollicutes bacterium D7]
gi|167704773|gb|EDS19352.1| hypothetical protein CLORAM_01350 [Clostridium ramosum DSM 1402]
gi|229382131|gb|EEO32222.1| glutamate racemase [Coprobacillus sp. D7]
Length = 261
Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 114/250 (45%), Gaps = 8/250 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I +FDSG+GGL VL +R L+P + IY+ D+ PYG L +
Sbjct: 1 MERAIGVFDSGVGGLTVLNSIRTLLPNENIIYIGDNYHCPYGEKTREQLFSYASEIVEYF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ K L V+ACNT + +EL++ + + +G + A + +++T AT
Sbjct: 61 I-KENVKLIVLACNTTSATVLNELQAVYKEVLIIGVIDATVEDFISRGVDNTLVIATAAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I Y + + + + L VE I D + + ++ +
Sbjct: 120 INSHKYPDTIDCYQTGIEVFTLPTPKLVPLVEAGMDKKDIY-DVLHEYLDSY-----AGK 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
I+L CTHYP++ + + + P ++++ +SD++ + R +L + N ++
Sbjct: 174 IKSIILGCTHYPILENQIKDILP-DIEYISSSDAVCKNVRDVLIKNNLLNLNKNKFIKIY 232
Query: 252 LSGKPDIAMR 261
+G+ D ++
Sbjct: 233 TTGRVDEFLK 242
>gi|329113332|ref|ZP_08242113.1| Glutamate racemase [Acetobacter pomorum DM001]
gi|326697157|gb|EGE48817.1| Glutamate racemase [Acetobacter pomorum DM001]
Length = 304
Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats.
Identities = 93/259 (35%), Positives = 141/259 (54%), Gaps = 5/259 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL FDSGIGGL +++ ++ L P Y+AD FPYG +D L +R++ L S + +
Sbjct: 34 ILAFDSGIGGLGIVRAIQALAPNVCIDYLADTAIFPYGEQDDDFLIERIVSLLSQAIRRL 93
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
QP V+ACNTA TL + LR+ +P M F+G VP I+ AA TQ+ +I +L+T AT+RR
Sbjct: 94 QPQAVVVACNTASTLALEALRAAWPDMPFVGCVPPIRWAARITQTKVIGLLATRATVRRP 153
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y S L Y +C + ++ LA E G + + I +EIEG F+ + R D +
Sbjct: 154 YLSRLHALYAPECTLIAHAAPGLAGCAELAFRGQDVPDSTILREIEGLFVHPDSNRLDAV 213
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS-- 253
L CTHY +++ R LSP + WLD + ++AR LL + Q A F +
Sbjct: 214 GLGCTHYTFVLNRLRALSPPGLTWLDPAPAVARHTCNLLA--HLPQKTHAHPCAWFTALP 271
Query: 254 -GKPDIAMRRLMQGFGLKS 271
+ D A+ ++ +G +
Sbjct: 272 DTQNDQALLTHLKPYGFSA 290
>gi|257468922|ref|ZP_05633016.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|317063170|ref|ZP_07927655.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688846|gb|EFS25681.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 263
Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats.
Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 11/262 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K SI +FDSG+GG VL+ M ++P + IY AD PYG L+ +
Sbjct: 2 KKDYSIGVFDSGVGGTTVLKIMAEILPHENMIYYADSGNAPYGKKTVEELQSLCFNIMDF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L K + VIACNTA ++ + + +G + P K AA +++G I++L+TP
Sbjct: 62 FL-KNRCKAVVIACNTATAAALTAIKERY-DIPVIGVITPGSKAAANISKNGHIAVLATP 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T I + + ++ L + +EE + + + + I
Sbjct: 120 FTANSNAYGEEIKKFAKKASVYQEGCSELCTMIEEGWETFEDRGEILDGHISQF-----P 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDH 248
D +VL CTHYP+I + +D + L + ++
Sbjct: 175 GSADTLVLGCTHYPIIREDIEKYFSG--KIVDPARETVIELIESLRDEDMLNNSKEKGKI 232
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
F+SG + R + G +
Sbjct: 233 EFFVSGDKEQFRRTAEKFLGFE 254
>gi|325104671|ref|YP_004274325.1| glutamate racemase [Pedobacter saltans DSM 12145]
gi|324973519|gb|ADY52503.1| glutamate racemase [Pedobacter saltans DSM 12145]
Length = 270
Score = 247 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 8/245 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSGIGGL V +R ++P+ IY D PYG+ A++ + +
Sbjct: 3 AEQPIGIFDSGIGGLTVANAIRKVLPKEKIIYFGDTGHMPYGDKSPDAIRYYSLKI-GKF 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L++ + VIACNTA +L D+L + L + P + Q I ++ T
Sbjct: 62 LEEKGCKVIVIACNTASSLAYDDLVQFMGDRIPILNVIDPVVHYVTDDMQYQKIGVIGTK 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + + ++ +++ +LA +EE I IE +
Sbjct: 122 ATISSDVYARKLKERNLGLQVNSLATPLLAPMIEEGFFENNISH----TVIESYLSSPQL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DH 248
+ D ++LACTHYPLI VD L+ + +A + L ++ + D
Sbjct: 178 QNIDALILACTHYPLIKREIESFFNNQVDILNTASIVADDVKLQLEKLQLLNNQSLDYKD 237
Query: 249 ALFLS 253
++S
Sbjct: 238 EFYVS 242
>gi|103486695|ref|YP_616256.1| glutamate racemase [Sphingopyxis alaskensis RB2256]
gi|123253315|sp|Q1GTU9|MURI_SPHAL RecName: Full=Glutamate racemase
gi|98976772|gb|ABF52923.1| glutamate racemase [Sphingopyxis alaskensis RB2256]
Length = 268
Score = 247 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 80/225 (35%), Positives = 116/225 (51%), Gaps = 1/225 (0%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
IL FDSG+GGL VL R L+P +Y AD G PYG + L R+ L
Sbjct: 3 PPAPDAPILFFDSGLGGLSVLGPTRALLPTAPIVYAADYAGLPYGRKSNEELAARVPALL 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
++++YQP L+VIACNTA T+ +R+ + +G VPAIK AA T+SG+I +L T
Sbjct: 63 GRLVERYQPRLAVIACNTASTIALGHVRAAL-DLPIVGTVPAIKPAAEMTKSGVIGVLGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+R+ Y +L + + S L + E G + + I + + G +
Sbjct: 122 EATVRQPYVDDLSARFAGGKTVLRHGSPGLVTGAEARLRGETVDPEVIARAVAGLRDQPR 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
G DV+VLACTH+PL+ + V +D ++ IARR L
Sbjct: 182 GDAIDVVVLACTHFPLLKDELQAGFGRGVALIDGAEGIARRIAHL 226
>gi|71066509|ref|YP_265236.1| glutamate racemase [Psychrobacter arcticus 273-4]
gi|71039494|gb|AAZ19802.1| glutamate racemase [Psychrobacter arcticus 273-4]
Length = 330
Score = 247 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 10/238 (4%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ID + I +FDSGIGGL V + +P +IY AD + PYGN + +K
Sbjct: 37 EIDTKGIKADRSAPIGLFDSGIGGLSVYLHLAHQLPNERYIYYADTLHVPYGNRDSEDIK 96
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+ L + L VIACN+A + R +P + +G VPA+K A ++SG
Sbjct: 97 ALTLTAV-KWLHQQGCKLIVIACNSASAYALETARHHYPQLPIVGLVPALKPAVLASKSG 155
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+++L+T ATL T +++I S + L VE ++++
Sbjct: 156 HVAVLATKATLNGTLLNDVITKIASPSATRVTKYFDPQLVPWVESGMPENSKTAQNLRQQ 215
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLL 234
++ D +VL CTHYP Q + +D+ +IA R + LL
Sbjct: 216 LQ----VFAKDGIDQLVLGCTHYPFFKDFLMQEIEEQKLSMQVVDSGQAIAERVKQLL 269
>gi|145629155|ref|ZP_01784954.1| glutamate racemase [Haemophilus influenzae 22.1-21]
gi|144978658|gb|EDJ88381.1| glutamate racemase [Haemophilus influenzae 22.1-21]
Length = 217
Score = 247 bits (633), Expect = 9e-64, Method: Composition-based stats.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 4/207 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 3 KKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAAC 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 63 QLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 122 KGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPW---AD 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPW 215
D +VL CTH+PLI + P
Sbjct: 179 MADLDTLVLGCTHFPLIKDEIQLCLPQ 205
>gi|315186198|gb|EFU19960.1| glutamate racemase [Spirochaeta thermophila DSM 6578]
Length = 286
Score = 247 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L DSGIGG+ L + F+YVAD FPYG L+ L+ L + +L
Sbjct: 26 RPVLFLDSGIGGIPYLLWALNHIEGEEFVYVADRAHFPYGPRSHEELEAILVDLVAGLLR 85
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+++P L V+ACNTA + LR+ + ++ F+G VPAIK AA+ T++G++ +L+T TLR
Sbjct: 86 RFRPKLVVLACNTASVVGLPALRARY-AIPFVGVVPAIKPAASLTRTGVVGLLATERTLR 144
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEE--YACGIKIKEDEIKKEIEGCFIEKEGKR 191
YT LI +Y + + V S + VE + + +++ ++ C +
Sbjct: 145 DFYTDELIATYANGARVVKVPSPHIVEFVEHRFIDASGEERRTAVREAVDRCVA----QG 200
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D IVL CTH+ + R L+ V +D+ + + RR LL + + R + +
Sbjct: 201 ADTIVLGCTHFVFLEAQIRSLAGEHVQVIDSREGVGRRLGHLLSYLPCGR-RGPSTASFY 259
Query: 252 LSGK--PDIAMRRLMQGFGLK 270
L+G+ P+ R + +GL
Sbjct: 260 LTGRTPPEGRYLRFTRHYGLS 280
>gi|325290677|ref|YP_004266858.1| glutamate racemase [Syntrophobotulus glycolicus DSM 8271]
gi|324966078|gb|ADY56857.1| glutamate racemase [Syntrophobotulus glycolicus DSM 8271]
Length = 304
Score = 247 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 50/278 (17%), Positives = 90/278 (32%), Gaps = 39/278 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V++++ +P+ +Y D PYG+ + + ++ +
Sbjct: 7 IGVFDSGVGGLTVVKQILASIPDARIVYFGDTARAPYGSRSKEEIIAFSSQIIPFLISQG 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V ACNT+ ++ F A T++G I +L+T T+
Sbjct: 67 A-DIIVAACNTSSANALPVIKKDFDLPIIGPIESGACLAVKMTRNGKIGLLATERTVASE 125
Query: 136 YTSNLIHS--------------------YVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ + + + +E D+
Sbjct: 126 AFHLAVTKVLTKGVRPLAEKSGASGQSGEKPISLVKSQACPLFVPLIEAGLA----DSDQ 181
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
+ + D I+L CTHYP + L V +D + I R
Sbjct: 182 ARNIVGMYLAPLTEAGVDTIILGCTHYPFLNSAITDLVGEKVVLVDPAVEIVSELRKAFK 241
Query: 236 RIN--------THQTRVFDDH------ALFLSGKPDIA 259
I +R +D F+SG P +
Sbjct: 242 EIEKAEKEGSRRQNSREKEDQWKQGQVKYFVSGDPGLF 279
>gi|304407349|ref|ZP_07389002.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
gi|304343790|gb|EFM09631.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
Length = 264
Score = 247 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 9/243 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I FDSGIGGL VL + +P ++Y+AD + PYG +K + ++ +
Sbjct: 2 TIGFFDSGIGGLSVLAESLRRLPAQDYLYMADTLHVPYGTKTKEEVKDYVFEAVERMMSR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATL 132
VIACNTA ++ ++LR+T+ S+ +G PA+K A + + +++T TL
Sbjct: 62 G-IDALVIACNTATSIAVEDLRATY-SLPIVGMEPAVKPAVEMNRATGKRVLVMATQLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ + + L E ++ E+ + E+ +++ G
Sbjct: 120 QLPKYYALVSRVDEGGIVDSLPLPGLVRYCESLQFDPQVMEEYFRAELAPYNLDEYG--- 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ VL CTHYP ++ R + P + +D + +R LL R + R
Sbjct: 177 -IFVLGCTHYPFYRNILRAMLPPHIQIVDGNAGTVKRLSALLNRFGI-EGRGHGHVDFMC 234
Query: 253 SGK 255
+G
Sbjct: 235 TGN 237
>gi|16079734|ref|NP_390558.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221310614|ref|ZP_03592461.1| hypothetical protein Bsubs1_14656 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314937|ref|ZP_03596742.1| hypothetical protein BsubsN3_14572 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319859|ref|ZP_03601153.1| hypothetical protein BsubsJ_14488 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324139|ref|ZP_03605433.1| hypothetical protein BsubsS_14627 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|11387238|sp|O05412|MURI2_BACSU RecName: Full=Glutamate racemase 2
gi|1934638|gb|AAB80890.1| YrpC [Bacillus subtilis subsp. subtilis str. 168]
gi|2635126|emb|CAB14622.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
Length = 265
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 9/241 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L
Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKEYI-FNAAEFLASQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133
VIACNTA ++ ++LR F +G PA+K A + + +++T TL+
Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NL+ + ++ L E + ED+I K ++ + K+
Sbjct: 121 EEKFHNLVKEIDHHDLVDCLALPGLVEFAENF----DFSEDKIIKYLKNELSSFDLKQYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+P + F +L VD + S A++ + +L N + F S
Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFNS 235
Query: 254 G 254
G
Sbjct: 236 G 236
>gi|310641730|ref|YP_003946488.1| glutamate racemase 2 [Paenibacillus polymyxa SC2]
gi|309246680|gb|ADO56247.1| Glutamate racemase 2 [Paenibacillus polymyxa SC2]
Length = 284
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 14/260 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL + +P +F+Y+AD + PYG + + IL K
Sbjct: 20 IGFFDSGLGGITVLSEALRRLPNENFVYMADTLHVPYGTKTPQEVLGYVKASVQTIL-KE 78
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
VIACNTA ++ ELR + +G PA+K A + + +L+TP TL+
Sbjct: 79 DIKALVIACNTATSIAVAELRKEYK-FPIIGMEPAVKPAVEMNRANGKRVLVLATPLTLK 137
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
++ + L+ + + L E+ + E+
Sbjct: 138 QSGYAALVSRVDDHGSVDSLPLPELVQYCEQ----LNFDRTELFNYFNHKLSSFNLDIYG 193
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV------FDD 247
+VL CTHYP + R+L P + +D S +R + +L N + V
Sbjct: 194 TVVLGCTHYPFYKEILRELLPSHIQLIDGSHGTVKRLKQVLSERNLLASPVKVGQPQEGH 253
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + + + ++ +
Sbjct: 254 VTFLCTSQDETYVHKMERAL 273
>gi|119472793|ref|ZP_01614730.1| glutamate racemase [Alteromonadales bacterium TW-7]
gi|119444752|gb|EAW26057.1| glutamate racemase [Alteromonadales bacterium TW-7]
Length = 261
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 8/242 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI-LDKYQ 76
+FDSGIGG VL ++ +P + Y D+ PYG + RL L I L+K
Sbjct: 2 VFDSGIGGTTVLDHIKQRIPNAQYSYFMDNAFLPYGAQTQQTIINRLCSLIHFIKLNKLN 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L VIACNTA T +R + +G VPAIK AA T+S I++L+TPAT+ +Y
Sbjct: 62 VDLIVIACNTASTSALSAVR-KITDIPIVGVVPAIKPAAELTRSNHIALLATPATIASSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T+ LI + S ++L SS+ L + E + +++ +EG IE K+TDV+V
Sbjct: 121 TNKLIAQHASNVTVNLYSSVELVNLAELLFFNGYLDTNKLHAVLEGLNIE---KQTDVLV 177
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD---DHALFLS 253
L CTH+P++ + + +D+ +IA R LL + + +
Sbjct: 178 LGCTHFPILTKQISEHFKNSIQLVDSGAAIANRVIYLLTESGLLAQNIPGIKKPLQYYAT 237
Query: 254 GK 255
Sbjct: 238 AN 239
>gi|254562390|ref|YP_003069485.1| glutamate racemase [Methylobacterium extorquens DM4]
gi|254269668|emb|CAX25640.1| glutamate racemase [Methylobacterium extorquens DM4]
Length = 291
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 108/263 (41%), Positives = 155/263 (58%), Gaps = 3/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ +
Sbjct: 18 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVME 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP
Sbjct: 78 RLLLRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATP 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188
T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E +
Sbjct: 137 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVTDAAILAEIAPCFVEGPD 196
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H
Sbjct: 197 GARTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 256
Query: 249 ALFLSGKP-DIAMRRLMQGFGLK 270
A+F G + A+ R ++ GL
Sbjct: 257 AVFTGGAGLNPALGRSLERRGLS 279
>gi|167626313|ref|YP_001676813.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|241668746|ref|ZP_04756324.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254877277|ref|ZP_05249987.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|167596314|gb|ABZ86312.1| Glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|254843298|gb|EET21712.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 265
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 18/249 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL V++ + ++P IY D PYG ++K ++
Sbjct: 4 NRPIGVFDSGIGGLTVVKNLMNILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D+ + +IACNT + KD ++ ++ + + A ++ + +++TPAT+
Sbjct: 64 DQ-EVKAIIIACNTISAIAKDIVQEIAKTVPVIDVISAGVSLVDSLKT--VGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ S + S +EE ++ E K+ +E K
Sbjct: 121 NSNAYALQIHKNNPSTEVYSSSCGLFVSMIEEGFIEGEVVELVAKQYLEY----FNDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-----INTHQTRVFDD 247
++L CTHYP+I + V +D S +A +L + ++ +
Sbjct: 177 QALILGCTHYPIIKDSIAKAL--DVKLIDPSL----QASKMLQQLLVENNLLNKNNSNPE 230
Query: 248 HALFLSGKP 256
+ +++ P
Sbjct: 231 YKFYVTDIP 239
>gi|288959026|ref|YP_003449367.1| glutamate racemase [Azospirillum sp. B510]
gi|288911334|dbj|BAI72823.1| glutamate racemase [Azospirillum sp. B510]
Length = 299
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 63/281 (22%), Positives = 107/281 (38%), Gaps = 21/281 (7%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++L+ I +FDSG GGL VL+ + P F+Y+ D PYG + + + +
Sbjct: 15 RRLKQLIGVFDSGHGGLTVLRALVDAAPGRPFVYLGDHAAAPYGPRSEDDIYRLTIAGMD 74
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAVPAIKQAAA-------- 116
+ + L VIACNTA + L+ + P LG + + +A
Sbjct: 75 RLFAQG-CRLVVIACNTAAAVALRRLQQEWLPSAHPGRNVLGVLVPMVEAITRVPWMIDT 133
Query: 117 -----YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + I +T AT+ I + + L +E A +I
Sbjct: 134 VPPDHLAEPRTVGIFATLATVNSGSFPREIGKRAPSVRVVQQACPDLVPLIERGAADGEI 193
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
E + + + + D +VL CTHYPL+ H+F + P V+ L AR
Sbjct: 194 -EPAVAGYVRVLLDKLGRQPLDAVVLGCTHYPLVRHLFARALPPGVEILSQPTLTARSLE 252
Query: 232 CLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLMQGFGLKS 271
R ++ + D F +G + + FG +
Sbjct: 253 QYFGRHPEYRPDPAEHDLKFFTTGDAALVSELAGRFFGHPT 293
>gi|321312180|ref|YP_004204467.1| glutamate racemase [Bacillus subtilis BSn5]
gi|320018454|gb|ADV93440.1| glutamate racemase [Bacillus subtilis BSn5]
Length = 265
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 9/241 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L
Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKEYI-FNAAEFLASQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133
VIACNTA ++ ++LR F +G PA+K A + + +++T TL+
Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NL+ + ++ L E + ED+I K ++ + K+
Sbjct: 121 EEKFHNLVKEIDHHDLVDCLALPGLVEFAENF----DFSEDKIIKYLKNELSSFDLKQYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+P + F +L VD + S A++ + +L N + F S
Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFNS 235
Query: 254 G 254
G
Sbjct: 236 G 236
>gi|312898722|ref|ZP_07758111.1| glutamate racemase [Megasphaera micronuciformis F0359]
gi|310620153|gb|EFQ03724.1| glutamate racemase [Megasphaera micronuciformis F0359]
Length = 270
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 7/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GGL V+ K+R L+P IYV D PYG + + + +
Sbjct: 6 KAEQPIGVFDSGVGGLTVVNKLRHLLPHEDIIYVGDTKRNPYGTRTQNEILTFTEQIIA- 64
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L++ Q L V ACNTA + ++R ++ LG I+ A + I++ +TP
Sbjct: 65 FLERRQVKLIVFACNTATAVAYMKMREKTKTL-LLGMSRGIETARHISTENRIAVFATPL 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + I LA+ +E ++ +E+++ +
Sbjct: 124 TIANHVHRDEAAQLDPSLTIVEQPCASLAALIERG----QLNTEEMRQAVTADTKPVLEA 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
D + CTHYP + +F ++ + ++D + A +A +L + +
Sbjct: 180 HVDTAIFGCTHYPFVQPLFEEICGDSIVFVDPAHETALQASAILKKEGLLNGQKERGRLR 239
Query: 250 LFLSGKPDIAMRRLMQGF 267
L + + +
Sbjct: 240 LCFTAEVQRGQKLAAHLL 257
>gi|240950246|ref|ZP_04754526.1| glutamate racemase [Actinobacillus minor NM305]
gi|240295247|gb|EER46046.1| glutamate racemase [Actinobacillus minor NM305]
Length = 253
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 6/251 (2%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL + ++R ++P H++Y D+ FPY + AL +R + + I +K L V+
Sbjct: 1 MGGLTIYDEVRKVLPNAHYLYCFDNAFFPYSEKSEQALIERAVKIVQKIAEKQPLDLVVV 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA T++ LR F +G VPAIK AAA +++ I +L+T T++R Y +LIH
Sbjct: 61 ACNTASTVVLPALRERF-DFPIVGTVPAIKPAAAISKTKTIGLLATVGTIKRPYVLDLIH 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
Y C + + + + E + +K+ +E D ++L CTH+
Sbjct: 120 RYAKDCQVEKIGNTQIVELAETKLLTGSVDLFSLKECVEPWL---NHPTLDTVILGCTHF 176
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
PL+ +QL P ++D+ ++IA+R + LL + H ++ F + + R
Sbjct: 177 PLLKEELKQLLPQVTYFVDSGEAIAKRVQSLLLENHHHSQEKERENTAFCTELTENFKNR 236
Query: 263 --LMQGFGLKS 271
+M G KS
Sbjct: 237 EVMMHKLGFKS 247
>gi|75675509|ref|YP_317930.1| glutamate racemase [Nitrobacter winogradskyi Nb-255]
gi|74420379|gb|ABA04578.1| glutamate racemase [Nitrobacter winogradskyi Nb-255]
Length = 271
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 97/264 (36%), Positives = 146/264 (55%), Gaps = 9/264 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+IL+ DSG+GGL VL+++ +P +IYVADD FPYG + + R++ L +++
Sbjct: 4 SPTILVLDSGLGGLTVLREIVNALPAARYIYVADDAFFPYGRLSEEDIIARVVPLVGELI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ P + VIACNT + LR+ +P+ F+G VPAIK A A +++ +S+L T AT+
Sbjct: 64 GAHAPDIVVIACNTMSVSVLGPLRAAYPA-PFVGTVPAIKPACAASKTKRVSVLGTRATV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR- 191
+R YT LI ++ C + LV + LAS E+ G + + +I EI CF+
Sbjct: 123 QREYTQALIRNHAQACTVTLVGAARLASLAEDALSGKLVSDADILSEITPCFVPAGEGGG 182
Query: 192 --TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
TD +VLACTHYPL++ +L+PWPV W+D + +IARR LL + DH
Sbjct: 183 LRTDAVVLACTHYPLLLDRLLRLAPWPVSWIDPAPAIARRVVDLLGLLGPLAPNTAGDHD 242
Query: 249 ----ALFLSGKPDIAMRRLMQGFG 268
+F SG+ L FG
Sbjct: 243 RPPEMIFTSGRSRTLADALAPFFG 266
>gi|293115464|ref|ZP_05791593.2| glutamate racemase [Butyrivibrio crossotus DSM 2876]
gi|292809801|gb|EFF69006.1| glutamate racemase [Butyrivibrio crossotus DSM 2876]
Length = 280
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 5/242 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GG+ VL ++ LMP +FIY D PYG + + + ++
Sbjct: 25 RPVGVFDSGVGGISVLSELVKLMPYENFIYFGDSANAPYGTKPLDKVAELTIHTADMLIA 84
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K VIACNTA +R+ +P++ +G PA+K AA I +L+T TL
Sbjct: 85 KG-CKCLVIACNTATVAAVSRIRNMYPAIPVIGIEPALKPAALDNPGKRILVLATHITLN 143
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
++ NL+ Y I + + + VE+ E ++ E D
Sbjct: 144 QSKFLNLMTRYKDLADIFTLEAPGIVEAVEKGLT----DSQEFMDYLKNLLHEYIDNPVD 199
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + + + D + AR L + V FL+
Sbjct: 200 AVVLGCTHYPFVKRQILEALQYTPAVYDGGNGTARETLHQLTMHSIVSHSVSKGTIEFLN 259
Query: 254 GK 255
Sbjct: 260 SD 261
>gi|47776279|dbj|BAD20743.1| glutamate racemase [Bacillus subtilis]
Length = 265
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 9/241 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L
Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGRVKEYI-FNAAEFLASQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133
VIACNTA ++ ++LR F +G PA+K A + + +++T TL+
Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NL+ + ++ L E + ED+I K ++ + K+
Sbjct: 121 EEKFHNLVKEIDHHDLVDCLALPGLVEFAENF----DFSEDKIIKYLKNELSSFDLKQYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+P + F +L VD + S A++ + +L N + F S
Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFDS 235
Query: 254 G 254
G
Sbjct: 236 G 236
>gi|291485080|dbj|BAI86155.1| putative glutamate racemase [Bacillus subtilis subsp. natto
BEST195]
Length = 265
Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 9/241 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L
Sbjct: 3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGRVKEYI-FNAAEFLASQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133
VIACNTA ++ ++LR F +G PA+K A + + +++T TL+
Sbjct: 62 NIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NL+ + ++ L E + ED+I K ++ + K+
Sbjct: 121 EEKFHNLVKEIDHHDLVDCLALPGLVEFAENF----DFSEDKIIKYLKNELSSFDLKQYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+P + F +L VD + S A++ + +L N + F S
Sbjct: 177 TIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFDS 235
Query: 254 G 254
G
Sbjct: 236 G 236
>gi|302391765|ref|YP_003827585.1| glutamate racemase [Acetohalobium arabaticum DSM 5501]
gi|302203842|gb|ADL12520.1| glutamate racemase [Acetohalobium arabaticum DSM 5501]
Length = 250
Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 9/252 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GG+ VL++ ++P +IY AD PYG +K + I D+
Sbjct: 3 IGFFDSGVGGITVLKEALKVLPNKDYIYYADTANVPYGTKPKEEVKHYVFDAVDFITDQG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA ++ ++LR F +G PA+K A ++ + + +TP TL+
Sbjct: 63 -INALVIACNTATSVAVNDLRDEF-QFPIIGMEPAVKPAVEKNKTKKVLVTATPLTLQEE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ S+ I + L E + E+ I +E F + R I
Sbjct: 121 KLWELVAKIGSKDIIDSLPLPKLVEFAENFI----FDEETILSYLEERFSSYDLNRYSSI 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ +FR++ P V+ +D + ++ + L + + +F S K
Sbjct: 177 VLGCTHFIFYRRLFRKIIPDDVEIIDGNRGAVKQLKRQLK---APEHKSGTGEIIFYSSK 233
Query: 256 PDIAMRRLMQGF 267
++ +
Sbjct: 234 KGNEDNIALREY 245
>gi|240139965|ref|YP_002964442.1| glutamate racemase [Methylobacterium extorquens AM1]
gi|240009939|gb|ACS41165.1| glutamate racemase [Methylobacterium extorquens AM1]
Length = 291
Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 108/263 (41%), Positives = 155/263 (58%), Gaps = 3/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ +
Sbjct: 18 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVME 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP
Sbjct: 78 RLLLRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATP 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188
T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E +
Sbjct: 137 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGAD 196
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H
Sbjct: 197 GARTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 256
Query: 249 ALFLSGKP-DIAMRRLMQGFGLK 270
A+F G + A+ R ++ GL
Sbjct: 257 AVFTGGAGLNPALGRSLERRGLS 279
>gi|119476761|ref|ZP_01617071.1| glutamate racemase [marine gamma proteobacterium HTCC2143]
gi|119450017|gb|EAW31253.1| glutamate racemase [marine gamma proteobacterium HTCC2143]
Length = 280
Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 94/267 (35%), Positives = 137/267 (51%), Gaps = 6/267 (2%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P + IL+FDSG+GGL ++Q +R +P Y+AD++ FPYG +D L R
Sbjct: 10 RPAMINAPH-ILVFDSGVGGLSIVQHIRLHVPHATITYLADNLFFPYGVLDDQTLLSRTC 68
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ S + YQP L V+ACN+A TL+ LR+ VPAIK AAA + + +I +
Sbjct: 69 EIVSWAHNHYQPSLIVLACNSASTLVLPHLRAILGVPVVG-VVPAIKPAAAMSTTNVIGL 127
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+TPAT++R YT LI + C + V S L VE G+K E+EIK +
Sbjct: 128 LATPATIQRDYTDELIAEFAPHCEVIKVGSAALVDFVERKMAGLKPTENEIKHILSLFNQ 187
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTHQTRV 244
D +VLACTH+PL+ +P W+D+ D++ARR LL + +
Sbjct: 188 HPRWSSVDTVVLACTHFPLVKRELSDAAPSIKHWVDSGDAVARRVTSLLTSLPGELSSGA 247
Query: 245 FDDHALFL--SGKPDIAMRRLMQGFGL 269
+ LF SG D ++ +Q FG
Sbjct: 248 AVNRILFTSSSGITDTF-KKGLQPFGF 273
>gi|253573395|ref|ZP_04850738.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846923|gb|EES74928.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 260
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 10/255 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGGL VL + +P F+Y AD + PYG +K+ + S ++ +
Sbjct: 3 IAFFDSGIGGLTVLTEAMRKLPNEDFLYFADTLHVPYGTKTLPEVKRYVEESVS-LIMQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
V+ACNTA + +ELR T+ + +G PA+K A +Q + + +T TL
Sbjct: 62 DIKALVVACNTATSAAIEELRRTY-DIPIVGMEPAVKPAVKRSQAAGKRVLVFATSLTLS 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ ++L+ + + L E+ ++ DEI++ + +
Sbjct: 121 LSKYTDLVARVDDHKVVDSMPLPELVQYCEQ----LQFDRDEIERYFSRKLAGIDLSQYS 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF-L 252
IVL CTH+P + +Q+ P ++ +D S R L+ + + + F H F
Sbjct: 177 TIVLGCTHFPYYKSILQQILPPHIELIDGSHGTVERLCSLIG-SSANPGQAFKGHIEFKC 235
Query: 253 SGKPDIAMRRLMQGF 267
S + + ++ +
Sbjct: 236 SDENPAYLDKMARAL 250
>gi|58040425|ref|YP_192389.1| glutamate racemase [Gluconobacter oxydans 621H]
gi|58002839|gb|AAW61733.1| Glutamate racemase [Gluconobacter oxydans 621H]
Length = 281
Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 125/255 (49%), Gaps = 2/255 (0%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSGIGG+ V+Q +R L+P H Y+AD FPYG D L R++ L ++ Q
Sbjct: 13 LVFDSGIGGMGVVQALRDLLPALHIDYLADTALFPYGEQPDDLLTSRIVSLLVAACERLQ 72
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + VIACNTA T+ LR ++ +G VP I+ A ++S +I +LST AT RR Y
Sbjct: 73 PDVLVIACNTASTIALPALRQRL-NIPVVGCVPPIRWAGRVSESRVIGLLSTSATARRPY 131
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
L + C + + LA E G I + +++ E+ F + G D +
Sbjct: 132 ILQLHRDFAPDCRLITHGARRLADLAERAFLGEPIADSDVQYELTCLFSQPHGGEIDTVG 191
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHY ++ F +LSP + WLD + ++AR+ R +L L
Sbjct: 192 LGCTHYTFLMDAFERLSPPGITWLDPAPAVARQVRTVLQDAPCSSAPSRPGRLLMTCAPQ 251
Query: 257 DIA-MRRLMQGFGLK 270
DIA + Q G
Sbjct: 252 DIARLETAAQRLGFS 266
>gi|294011705|ref|YP_003545165.1| glutamate racemase [Sphingobium japonicum UT26S]
gi|292675035|dbj|BAI96553.1| glutamate racemase [Sphingobium japonicum UT26S]
Length = 267
Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 3/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
Q +L FDSG+GGL +L + +P +Y AD GFPYG + + R+ L +
Sbjct: 5 PQAPLLFFDSGVGGLSILAPAQAALPHAPVVYAADSAGFPYGTRSEAEIAARVPALLGRL 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y+P L+VIACNTA T+ +R+ + +G VPAIK AA +QS + +L T AT
Sbjct: 65 VERYRPRLAVIACNTASTIALSAVRAAL-DIPVVGTVPAIKPAALLSQSRVFGVLGTDAT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y L + S C + S L E G + + + G F + G R
Sbjct: 124 VRQPYVDRLAAEHGSDCTVLRHGSAALVQLAEAKLRGEPLDPAVARDALAGLFDQPGGDR 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D++VLACTH+PL+ SP P+ ++ + IARR L + + A+F
Sbjct: 184 MDIVVLACTHFPLVEAELAAASPRPLRFVHGGEGIARRI-AYLTQGQPWPSEPQPGTAVF 242
Query: 252 LSGKPDIA-MRRLMQGFGLK 270
+ +R ++ +GL
Sbjct: 243 TRLDESVERLRPALESYGLP 262
>gi|312870481|ref|ZP_07730601.1| glutamate racemase [Lactobacillus oris PB013-T2-3]
gi|311094038|gb|EFQ52362.1| glutamate racemase [Lactobacillus oris PB013-T2-3]
Length = 266
Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 6/243 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL VL+ +R +P+ ++V D FPYG +++ + + ++
Sbjct: 3 RRPIGVMDSGLGGLSVLRVLRRELPDESLLFVGDQGHFPYGTKTQAEVRRLALAIGRFLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA L++ + +G + AA T I ++ T +T+
Sbjct: 63 -RHDAKLMVVACNTATGAALPALQAA-LPIPVIGVIRPGASAALATNPRTIGVIGTDSTI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +H + + L S VE G + + K ++ CF +
Sbjct: 121 KNGAYERTLHELQPAVQVVSQPAQPLVSIVEHGQTGTPAAQQAVDKVLQ-CFAT---QPV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ ++L CTH+P + ++ V +D + + + +L + AL+
Sbjct: 177 ETLILGCTHFPFLSREIQRRLGPSVHLIDPAYETGQTVKQVLTDKHLLAAGGQQRTALYT 236
Query: 253 SGK 255
+G+
Sbjct: 237 TGR 239
>gi|304439446|ref|ZP_07399355.1| glutamate racemase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372042|gb|EFM25639.1| glutamate racemase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 267
Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 12/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ VL+++ ++P+ +IY D PYG ++ F+ +D+
Sbjct: 4 IGIFDSGVGGVSVLKELLKVLPDEEYIYYCDQKNLPYGEKTPGEIRNLTKTSFN-FIDRQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + L++ F G + I + T++ I I++T +T+
Sbjct: 63 NVDMVVIACNTATANAERYLKAIF-GFPIFGIIRSGISEIVKATKNNKILIIATESTVEN 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I S V + L VE+ ++ +K+ +E D
Sbjct: 122 GIYQEKIKSLVPNADVRAKGCSNLVRAVEDGHIDDELAVQVVKEYLEEY----RDFEFDT 177
Query: 195 IVLACTHYPLIVHVFRQL---SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
+VL CTH+PL ++ V +D + S+A L + R L+
Sbjct: 178 LVLGCTHFPLARPAIEKVLEEMDKEVTIVDPAKSLAETVSEFLQDRDFENKR--SGIKLY 235
Query: 252 LS 253
S
Sbjct: 236 TS 237
>gi|218531473|ref|YP_002422289.1| glutamate racemase [Methylobacterium chloromethanicum CM4]
gi|218523776|gb|ACK84361.1| glutamate racemase [Methylobacterium chloromethanicum CM4]
Length = 286
Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats.
Identities = 107/263 (40%), Positives = 154/263 (58%), Gaps = 3/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ +
Sbjct: 13 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEERLVARVIAVME 72
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP
Sbjct: 73 RLLLRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATP 131
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188
T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E +
Sbjct: 132 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGAD 191
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H
Sbjct: 192 GACTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 251
Query: 249 ALFLSGKP-DIAMRRLMQGFGLK 270
A+F G + A+ R ++ GL
Sbjct: 252 AVFTGGAGLNPALGRSLERRGLS 274
>gi|4511996|gb|AAD21556.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 224
Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 114/209 (54%), Gaps = 1/209 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL F+SG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSRPILFFNSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K + E++ + EG R
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDR 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWL 220
DV+VLACTH+PL+ +SP P L
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPAPCYLL 208
>gi|163852632|ref|YP_001640675.1| glutamate racemase [Methylobacterium extorquens PA1]
gi|163664237|gb|ABY31604.1| glutamate racemase [Methylobacterium extorquens PA1]
Length = 291
Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats.
Identities = 107/263 (40%), Positives = 154/263 (58%), Gaps = 3/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ +
Sbjct: 18 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVME 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T++ LIS+L+TP
Sbjct: 78 RLLLRHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRTRLISLLATP 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188
T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E +
Sbjct: 137 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGAD 196
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H
Sbjct: 197 GAYTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 256
Query: 249 ALFLSGKP-DIAMRRLMQGFGLK 270
A+F G + A+ R ++ GL
Sbjct: 257 AVFTGGAGLNPALGRSLERRGLS 279
>gi|300869685|ref|YP_003784556.1| glutamate racemase [Brachyspira pilosicoli 95/1000]
gi|300687384|gb|ADK30055.1| glutamate racemase [Brachyspira pilosicoli 95/1000]
Length = 267
Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 109/258 (42%), Gaps = 13/258 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GG+ VL+K+ ++P ++IY+ D+ PYG+ + + + + ++
Sbjct: 5 SKPIAVFDSGFGGISVLKKLLNILPNENYIYLGDNHNIPYGDKSKEEITQLSIKILDFLI 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPAT 131
K ++VIACNT D L+ + ++ + + ++ T++ ISI++T T
Sbjct: 65 -KQNCKMAVIACNTITASSYDVLKEKY-NIPIIEIISNGVEDIIDNTKNNNISIMATEFT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I Y + + V+ L +E + + +++K
Sbjct: 123 VHSNMYHDKILDYNDKIKVTQVACQKLCPMIENNWYSYDD-----RILVLEEYVKKIDDN 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD----WLDNSDSIARRARCLLPRINTHQTRVFDD 247
+D ++LACTHYP I+ + + +D S IA + L N T
Sbjct: 178 SDTLLLACTHYPFIIDDIKSVVNRKKTNIKNIIDPSTKIALSIKKYLIDNNLLNT-SGGK 236
Query: 248 HALFLSGKPDIAMRRLMQ 265
F +G + +
Sbjct: 237 LKFFTTGDKKDFNDFVSR 254
>gi|296125119|ref|YP_003632371.1| glutamate racemase [Brachyspira murdochii DSM 12563]
gi|296016935|gb|ADG70172.1| glutamate racemase [Brachyspira murdochii DSM 12563]
Length = 275
Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 114/255 (44%), Gaps = 13/255 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL VL+++ L+P ++IY+ D++ PYG+ + + + ++ K
Sbjct: 11 PIAVFDSGFGGLTVLKQLLQLLPNENYIYLGDNINIPYGDKSEEEIINLTSKMVEFLISK 70
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPATLR 133
++ IACNT + L+ + + + + + A T++ IS+++T T+
Sbjct: 71 KCKIII-IACNTISACAYNILKQKY-DIPIIEVISNGVADALNKTKNNNISVMATEFTVH 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
N I+ + + I +S L +E + D +K ++ ++D
Sbjct: 129 SNVYKNKINKHNKESKITQISCKELCPMIENDWYSYDNRLDVLKNYLKN-----IDDKSD 183
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVD-----WLDNSDSIARRARCLLPRINTHQTRVFDDH 248
++LACTHYP I+ ++ + V +D + + + L + N T +D
Sbjct: 184 TLILACTHYPHIIDDIKKTLEYNVKNSIKNIIDPAYHTSMSVKEYLEKNNLINTDKTNDI 243
Query: 249 ALFLSGKPDIAMRRL 263
++ + + + +
Sbjct: 244 TIYTTASVEKEEKII 258
>gi|85373785|ref|YP_457847.1| glutamate racemase [Erythrobacter litoralis HTCC2594]
gi|84786868|gb|ABC63050.1| glutamate racemase [Erythrobacter litoralis HTCC2594]
Length = 256
Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 6/256 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FD+G+GGL VL ++R ++P IY AD G PYG + + R+ L + ++YQP
Sbjct: 1 MFDTGVGGLTVLAELRKVLPNAPVIYAADYAGLPYGTKTEAEVAARVCGLLGRMSERYQP 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R+ Y
Sbjct: 61 RAICIACNTASTIALGMVREVL-EVPIIGTVPAIKPAAAMTETGVIGLLGTAATVRQPYV 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L + S + ++ L E G + + ++ E+ + R D +VL
Sbjct: 120 DRLEAEFASDTVLIRFAASGLVDLAEAKLRGETVGTNSLRAEVRALLEAENADRIDTLVL 179
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
ACTH+PL+ Q+ V + ++ IARR + R D +G
Sbjct: 180 ACTHFPLLEEELLQVFGPQVRMVHGAEGIARRIAAV--THGQQFARTTPD-RFITTGSAK 236
Query: 258 IAMRRL--MQGFGLKS 271
A + +GL S
Sbjct: 237 DAADLAHCLSQYGLDS 252
>gi|332977227|gb|EGK14022.1| glutamate racemase [Psychrobacter sp. 1501(2011)]
Length = 352
Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats.
Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 10/234 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V +R +P H++Y AD + PYG +K + ++
Sbjct: 18 SAPIGIFDSGVGGLSVYLHLRQQLPNEHYLYYADTLNVPYGPRSSAEIKVLSLIAVDWLV 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACN+A R P + +G VPA+K A + S +++L+T ATL
Sbjct: 78 AAG-CKLIVIACNSASAHALPHARQKHPHIPIVGLVPALKPAVLNSNSKNVAVLATKATL 136
Query: 133 RRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ +I Y + ++ L VE + +K +++ +
Sbjct: 137 DGELLNTVISDYALPANVNVMKWFDPNLVPWVEAGMPLDSETPERLKCQLKR----FAEQ 192
Query: 191 RTDVIVLACTHYPLIVH-VFRQLSPW--PVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYP V ++ + +D+ +IA R + LL + +
Sbjct: 193 RVDHLVLGCTHYPFFREFVLAEVESENLGIKVVDSGAAIAARVKALLQQFQSLA 246
>gi|302672271|ref|YP_003832231.1| glutamate racemase MurI [Butyrivibrio proteoclasticus B316]
gi|302396744|gb|ADL35649.1| glutamate racemase MurI [Butyrivibrio proteoclasticus B316]
Length = 272
Score = 244 bits (625), Expect = 7e-63, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 6/219 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL VL + +P +I+ AD PYG + + + ++DK
Sbjct: 3 IGIFDSGIGGLSVLHEAYHRLPGQEYIFYADTDHVPYGTKTPEQIVEFAIDNAQFLIDKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA ++ ELRS F + LG PA+K A T I +++TP T+R
Sbjct: 63 AEAL-VVACNTATSVAIKELRSRF-DIPILGMEPAVKPAVEGTDDKRIMVIATPVTIRED 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L+H + + L++ L E+ + +E+ I G F + +
Sbjct: 121 KLKDLLHRVDEEHRVDLLAMPRLVEFAEK----EQFDTEEVVGYIRGRFANFDPTDYCAL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+ V +D + +L
Sbjct: 177 VLGCTHFNYFKPVLEDFFGKDTLLVDGNYGTVHHLADVL 215
>gi|261408244|ref|YP_003244485.1| glutamate racemase [Paenibacillus sp. Y412MC10]
gi|261284707|gb|ACX66678.1| glutamate racemase [Paenibacillus sp. Y412MC10]
Length = 258
Score = 244 bits (625), Expect = 7e-63, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 8/256 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GGL VL +P F+++AD + PYG +K + I+ +
Sbjct: 3 IAFFDSGLGGLTVLTAAMKKLPHEDFLFLADTLHVPYGTKAKEDVKAYIHQAMETIM-QE 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
+ V+ACNTA ++ +LR +P + +G PA+K A + I +L+TP TL+
Sbjct: 62 EVKAIVVACNTATSMAISDLRKAYP-IPVIGMEPAVKPAVEINRASGKRILVLATPLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +L+ S + L E + + + F +
Sbjct: 121 ESKYKDLVRRVDSMHIVDSQPLPELVEHCEA----LNFDPEIMNAYFTKKFEAFDLNEYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTHYP + L P + +D S+ R +L + + D L S
Sbjct: 177 TIVLGCTHYPFYKRILSDLLPDHIRIIDGSEGTVNRLIQVLSDQDLLSSSGSQDVKLLNS 236
Query: 254 GKPDIAMRRLMQGFGL 269
+ +++ + +
Sbjct: 237 SQSAEYTQKMEKALSI 252
>gi|323142469|ref|ZP_08077289.1| glutamate racemase [Phascolarctobacterium sp. YIT 12067]
gi|322413046|gb|EFY03945.1| glutamate racemase [Phascolarctobacterium sp. YIT 12067]
Length = 267
Score = 244 bits (625), Expect = 8e-63, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 6/242 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I + DSG+GGL VL+ + ++P FIYV D PYG + ++ + + +
Sbjct: 5 QPIGVLDSGVGGLSVLKCLHQMLPYEDFIYVGDTARTPYGTRSEQEIRGFVGEIIDWLAA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K VIACNT L D LR T P +G +Q A + + I +L+T T+
Sbjct: 65 KNVKQ-VVIACNTLTMLGVDSLRGTHP-FGVVGMSKGAQQLLAASPNKKIGVLATQFTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + +Q ++ V+ +E G + E+++ I + +
Sbjct: 123 SGLHKKAILAADAQAQVYPVACPKFVPLIE----GERFDSPELQQAIAEYTEPFKKAGVE 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L+CTHYP I V LD + + + A L +T + +
Sbjct: 179 AVILSCTHYPFIKEQIEADLGPNVKVLDPAAATSADAIAALKEEGLLRTEGKGRLQVCCT 238
Query: 254 GK 255
Sbjct: 239 AD 240
>gi|225872661|ref|YP_002754118.1| glutamate racemase [Acidobacterium capsulatum ATCC 51196]
gi|225792605|gb|ACO32695.1| glutamate racemase [Acidobacterium capsulatum ATCC 51196]
Length = 276
Score = 244 bits (625), Expect = 8e-63, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 10/256 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+ + +P+ F+Y D PYG + + + ++ +
Sbjct: 11 IGVFDSGFGGLTVLRALLRELPQAEFLYFGDTARLPYGAKSRETIARYAVSAAEFLV-RQ 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRR 134
VIACNTA L D+LR+ + LG V AA A++ SG + +++T AT+
Sbjct: 70 GAEYLVIACNTASALALDDLRAAL-DIPVLGVVETGANAAQAHSHSGDVLVIATAATVES 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RT 192
+ + + +L VEE + + + + +
Sbjct: 129 HAYATACAERNLRA--VEKACPLLVPLVEEGWIDHPVTREVLSIYFTELMHQSKAAALAP 186
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ Q P + +D+++ A + ++ Q F
Sbjct: 187 DTLLLGCTHYPLLREPIEQAIPAQIRVIDSAEV---TAAQVAAAVHAPQAGTPAAPRFFA 243
Query: 253 SGKPDIAMRRLMQGFG 268
+ P R + G
Sbjct: 244 TDSPAKFQRLGSRFLG 259
>gi|220931107|ref|YP_002508015.1| glutamate racemase [Halothermothrix orenii H 168]
gi|254766117|sp|B8D151|MURI_HALOH RecName: Full=Glutamate racemase
gi|219992417|gb|ACL69020.1| glutamate racemase [Halothermothrix orenii H 168]
Length = 253
Score = 244 bits (625), Expect = 8e-63, Method: Composition-based stats.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 9/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ VL++ L+P +IY AD PYG + + +++ + ++++
Sbjct: 3 IGIFDSGVGGITVLKEALNLLPGEDYIYYADTANVPYGTKDKNEVRQYIFKAVEFLINRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ +LR T+ +G PA+K A +++ + +L+TP T+R
Sbjct: 63 -IEALVVACNTATSIAIKDLRETY-QFPIVGMEPAVKPAVERSRNKKVLVLATPLTIREE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL+ ++ + + L EYA G E+ I ++ + +
Sbjct: 121 KFRNLVSRVKAEDIVDSLGLPGLV----EYAEGFVFDENIIIPYLKDRLSPFNLQEYGTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALFLSG 254
VL CTH+ +F ++ P +D +D + R + LL + + + + SG
Sbjct: 177 VLGCTHFLYFRDIFNKIIPDHIDIIDGNKGTVRHLKNLLLQSGFKTGSEGSGEIIFYSSG 236
Query: 255 KPDIAMRRLMQGF 267
K D RRL +
Sbjct: 237 KKD--ERRLKKYL 247
>gi|149914761|ref|ZP_01903291.1| indolepyruvate ferredoxin oxidoreductase [Roseobacter sp. AzwK-3b]
gi|149811554|gb|EDM71389.1| indolepyruvate ferredoxin oxidoreductase [Roseobacter sp. AzwK-3b]
Length = 270
Score = 244 bits (625), Expect = 8e-63, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 103/266 (38%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + S + D
Sbjct: 2 AVGIFDSGLGGLTVLDAVEKRLPDVPFVYFGDNAHAPYGVRDADDVYDLTTRAVSRLWDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ + LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQENWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ + +L CTHYPL+ + F++ V ++ +A L R
Sbjct: 179 A--LKRKMPNPEAAILGCTHYPLMQNAFQEALGPDVQVYSQANLVAESLADYLTRHPAML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ A +G P R Q
Sbjct: 237 G-SGREAAFLTTGDPKRVSSRATQFL 261
>gi|293376564|ref|ZP_06622792.1| glutamate racemase [Turicibacter sanguinis PC909]
gi|325839373|ref|ZP_08166812.1| glutamate racemase [Turicibacter sp. HGF1]
gi|292644790|gb|EFF62872.1| glutamate racemase [Turicibacter sanguinis PC909]
gi|325490493|gb|EGC92809.1| glutamate racemase [Turicibacter sp. HGF1]
Length = 257
Score = 244 bits (625), Expect = 9e-63, Method: Composition-based stats.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 9/242 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGGL VL + +P + ++Y AD + PYG ++ + ++ K
Sbjct: 3 IGFFDSGIGGLTVLSEALKRLPHHDYLYYADTLHAPYGPKPKEEVRGYIFEAIEFLVRKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
+ VIACNTA ++ ++LR + + +G PA+K A + Q + + +TP TL+
Sbjct: 63 A-DIIVIACNTATSIAVNDLREKY-QIPIIGMEPAVKPAIEWVQESGKRVLVTATPLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+LI L+ L E + + + ++ ++ +
Sbjct: 121 EEKLHHLIERLDQSHVTDLLPLPDLVRFAESF----DFSPETVVPYLKKQLVDYQISDYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+PL F+++ ++ +D S ++ + +T + S
Sbjct: 177 AIVLGCTHFPLFASSFKEVFEPGIELIDGSVGTVTHLANIIDTMK-GETSKTPTVTFYQS 235
Query: 254 GK 255
G+
Sbjct: 236 GR 237
>gi|8102060|gb|AAF72725.1|AF264024_1 glutamate racemase [Psychrobacter sp. St1]
Length = 296
Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 18/272 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + KK I +FDSG+GGL V + +P ++Y AD + PYGN + +
Sbjct: 1 MNLGTVINNKKRNAPIGLFDSGVGGLSVYLHLAQQLPAERYVYYADTLNVPYGNRDSADI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ + + ++ L VIACN+A + R +P + +G VPA+K A + +++
Sbjct: 61 EALTLTAVDWLYEQG-CKLIVIACNSASAYALETARRRYPQLPIVGLVPALKPAISASKT 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCH--IHLVSSMILASRVEEYACGIKIKEDEIKK 178
G + +L+T ATL T + +I + + + L VE G+ ++D +
Sbjct: 120 GRVVVLATKATLNGTLLNEVIDHFAKPNNTVVTKYFDPQLVPWVE---AGMPEQDDTALR 176
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYP----LIVHVF--RQLSPWPVDWLDNSDSIARRARC 232
+ D +VL CTHYP +++ +QL+ + +D+ +IA R +
Sbjct: 177 -LRQQLTLFAHDGVDQLVLGCTHYPFFKTFLLNEIAQQQLA---MQVVDSGQAIAERVKQ 232
Query: 233 LLPRINTHQ--TRVFDDHALFLSGKPDIAMRR 262
LL DDH L + K + +
Sbjct: 233 LLAANQLSALIDNTPDDHCLETTDKTKVVTQP 264
>gi|195953669|ref|YP_002121959.1| glutamate racemase [Hydrogenobaculum sp. Y04AAS1]
gi|229486240|sp|B4UA20|MURI_HYDS0 RecName: Full=Glutamate racemase
gi|195933281|gb|ACG57981.1| glutamate racemase [Hydrogenobaculum sp. Y04AAS1]
Length = 259
Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 11/232 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R + + +Y+ D PYG + + ++++
Sbjct: 3 IGMFDSGVGGLTVLKSVRKVYDKVDIVYLGDTARVPYGIKSKETIITYAKESANFLINQ- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
+ +IACN+ + L+ F + +G + A ++ A +++ + I+ T AT+
Sbjct: 62 NVDVILIACNSVSANAMEALQEMF-DIPIVGVIEAGVEAALKSSKTKHVGIIGTSATINS 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KRTD 193
+ ++ + + + VEE I KK +E E + K D
Sbjct: 121 NKYQERLEAFN--IKTYAKACPLFVPIVEEKLINTDIS----KKAVEFYLKEFKDLKDID 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
++L CTHYPL+ + P ++ + +SD+I ++ T ++
Sbjct: 175 TLILGCTHYPLLEEDIKAFLP-HINLVSSSDAIISYINNIVKNEGNATTELY 225
>gi|126735639|ref|ZP_01751384.1| glutamate racemase, putative [Roseobacter sp. CCS2]
gi|126714826|gb|EBA11692.1| glutamate racemase, putative [Roseobacter sp. CCS2]
Length = 270
Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ +Y+ D PYG + + D
Sbjct: 2 AVGIFDSGLGGLTVLDAVAKRLPDVPLVYMGDSAHAPYGVRTPDDIYDLTTKSTQRLFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQ-----------SG 121
L ++ACNTA ++ + LG + +A Q +
Sbjct: 62 G-CDLVILACNTASAAALRRMQEAWVPDGKRVLGVFVPLIEALTERQWGDNSPPREVDTK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E + ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVSSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ D +L CTHYPL+ F++ V ++ +A L R
Sbjct: 179 A--LKRKMPEPDAAILGCTHYPLMAKEFQKALGAHVKVFSQAELVAESLADYLERRPEMV 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
D A +G P R Q
Sbjct: 237 G-PGTDSAFLTTGDPAQVSSRATQFL 261
>gi|329922868|ref|ZP_08278384.1| glutamate racemase [Paenibacillus sp. HGF5]
gi|328941641|gb|EGG37926.1| glutamate racemase [Paenibacillus sp. HGF5]
Length = 258
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 8/256 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GGL VL +P F+++AD + PYG +K + I+ +
Sbjct: 3 IAFFDSGLGGLTVLTAAMKKLPHEDFLFLADTLHVPYGTKAKEDVKAYIHQAMG-IIMQE 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
+ V+ACNTA ++ +LR +P + +G PA+K A + I +L+TP TL+
Sbjct: 62 EVKAIVVACNTATSMAISDLRKAYP-IPVIGMEPAVKPAVEINRASGKRILVLATPLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +L+ S + + L E + + + F +
Sbjct: 121 ESKYKDLVRRVDSMHIVDSLPLPELVEHCEA----LNFDPEIMNAYFTKKFEAFDLNEYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTHYP + L P + +D S+ R +L + + D L S
Sbjct: 177 TIVLGCTHYPFYKRILSDLLPDHIRIIDGSEGTVNRLIQVLSDQDLLSSSGSQDVKLLNS 236
Query: 254 GKPDIAMRRLMQGFGL 269
+ +++ + +
Sbjct: 237 SQSAEYTQKMEKALSI 252
>gi|254440325|ref|ZP_05053819.1| glutamate racemase [Octadecabacter antarcticus 307]
gi|198255771|gb|EDY80085.1| glutamate racemase [Octadecabacter antarcticus 307]
Length = 269
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 56/266 (21%), Positives = 99/266 (37%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL ++ +P+ F+Y AD PYG + + D
Sbjct: 2 AVGIFDSGLGGLTVLDAVQQRLPDVPFVYYADSANAPYGVRTADDIYNLTTAATQALFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGA-VPAIKQAAAYTQ----------SG 121
L ++ACNTA ++ ++ LG VP I+ +
Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPKDKRVLGVFVPLIEAMTERSWGDNSPPREVGVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEGQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ D VL CTHYP++ F+ V +D +A L R
Sbjct: 179 A--LKRKMPEPDAAVLGCTHYPMMQDAFQTALGADVKVFSQADLVADSLADYLQRRPEMA 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
SG P R Q
Sbjct: 237 G--GGTSKFLTSGDPKRVSDRATQFL 260
>gi|126640457|ref|YP_001083441.1| glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 256
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 56/245 (22%), Positives = 111/245 (45%), Gaps = 11/245 (4%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86
V ++ +P +Y AD PYG D +++ D L + ++V+ACNT
Sbjct: 2 SVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAV-DWLYRQGCKIAVVACNT 60
Query: 87 AFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145
A D LR + +G VPA+K A T+S ++++L+TPAT R +++ +
Sbjct: 61 ASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKFA 120
Query: 146 --SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP 203
+ + ++S+ L VE + + +++ ++ + D +VL CTHYP
Sbjct: 121 VPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ----PAVEQGADYLVLGCTHYP 176
Query: 204 LIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---LFLSGKPDIAM 260
+ L +D+ ++AR+ +L + ++ + A ++SG A+
Sbjct: 177 FLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIRQNVARIECYVSGNNADAL 236
Query: 261 RRLMQ 265
+ ++Q
Sbjct: 237 QPVLQ 241
>gi|260428076|ref|ZP_05782055.1| glutamate racemase [Citreicella sp. SE45]
gi|260422568|gb|EEX15819.1| glutamate racemase [Citreicella sp. SE45]
Length = 270
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 106/274 (38%), Gaps = 23/274 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +PE F+Y AD PYG + + +
Sbjct: 2 AVGVFDSGLGGLTVLDAVSKRLPEVPFVYFADSAHAPYGVRDADDIYNLTTAAVDRLWHA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ T+ LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQETWIPRDKRVLGVFVPLIEAMTERQWGDNSPPREVGVQ 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+R + + + L +EE + + E ++ ++
Sbjct: 121 HVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGLVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ + +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 179 A--LKRKMPEPEAAILGCTHYPLMEDIFQEALGPDVTVYSQANLVAESLADYLRRHPGML 236
Query: 242 TRVFDDHALFLSGKPDI----AMRRLMQGFGLKS 271
+ +G P A R L + +S
Sbjct: 237 GSGTES-RFLTTGDPRKVSGHATRFLRREISFES 269
>gi|93007073|ref|YP_581510.1| glutamate racemase [Psychrobacter cryohalolentis K5]
gi|92394751|gb|ABE76026.1| glutamate racemase [Psychrobacter cryohalolentis K5]
Length = 333
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 65/239 (27%), Positives = 101/239 (42%), Gaps = 10/239 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ I +FDSGIGGL V + +P +IY AD + PYGN + +K +
Sbjct: 42 ADPDRSAPIGLFDSGIGGLSVYLHLAQQLPNERYIYYADTLNVPYGNRDSDDIKTFTLTA 101
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L + L VIACN+A R +P + +G VPA+K A ++SG +++L+
Sbjct: 102 V-EWLYQQGCKLIVIACNSASAYALQTARCHYPQLPIVGLVPALKPAVLASKSGHVAVLA 160
Query: 128 TPATLRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
T ATL +++I + S + L VE + E + +
Sbjct: 161 TKATLNGKLLNDVIATIASPSATRVTKYFDPQLVPWVESGMP----ENSETAQNLRQQLQ 216
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQ 241
D +VL CTHYP Q + +D+ +IA R + LL N
Sbjct: 217 VFAKDGVDQLVLGCTHYPFFKDFVMQAIESQRLSMQVVDSGQAIAERVKQLLIANNLSA 275
>gi|88861400|ref|ZP_01136029.1| glutamate racemase [Pseudoalteromonas tunicata D2]
gi|88816575|gb|EAR26401.1| glutamate racemase [Pseudoalteromonas tunicata D2]
Length = 269
Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 10/249 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
LQ I++FDSGIGG VL+ ++ P + Y+ D++ PYGN L++RL+ +
Sbjct: 4 LQPHIVVFDSGIGGTTVLEHIQAAYPFAQYSYLMDNLFMPYGNLTIEVLQQRLLAKLKTV 63
Query: 72 LDKYQP-VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+++ + VIACNTA T D LRS + + +G VPAIK A + +G + +L+TP
Sbjct: 64 QEQFVKIDIIVIACNTASTQTLDFLRS-YTDIPIVGVVPAIKPACLQSSTGSVGLLATPG 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ YT +LI+++ + +HL S L S E+ + D++ +E+E K +
Sbjct: 123 TIKNVYTQSLINAHSNNVKVHLYGSTRLVSLAEDKFWFGVVSIDDVAEELERL---KIEQ 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-----THQTRVF 245
D ++L CTH+P + QL + +D+ +IA R LL +
Sbjct: 180 SIDHLILGCTHFPFLKSELAQLLSPSMKIIDSGAAIANRVSFLLSENGWVKDDAQNEVIK 239
Query: 246 DDHALFLSG 254
+ +
Sbjct: 240 KPLRYYATA 248
>gi|72381894|ref|YP_291249.1| glutamate racemase [Prochlorococcus marinus str. NATL2A]
gi|123621455|sp|Q46LT2|MURI_PROMT RecName: Full=Glutamate racemase
gi|72001744|gb|AAZ57546.1| glutamate racemase [Prochlorococcus marinus str. NATL2A]
Length = 265
Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 11/256 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG VL+K+ L P FIY+AD PYG + +KK + S
Sbjct: 3 IGLFDSGIGGFTVLKKVIKLCPNNSFIYLADTARLPYGIKTTNEIKKIAEEISSWF-RYQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ ++ACNT + D L+ + I AA+ Q + +L+TP+T++
Sbjct: 62 KIDAFLVACNTTNAIALDILKKNLD----IPVFDLIGSAASTIQESRVGVLATPSTVKTK 117
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+N I + + + +E I D+I G ++ +
Sbjct: 118 AYTNAILEFKPKTFVIEQPCPAFVPMIE----MDNINSDDITDVATGYLQPLLKQKIHSL 173
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INTHQTRVFDDHALFLS 253
+L C+HYPLI R++ P V +D +++++ + + + N + + F D +++
Sbjct: 174 ILGCSHYPLIAPSLRKVLPSSVKLIDPAEALSFKLKLFIDSKTSNYSKNKNFVDLKFYVT 233
Query: 254 GKPDIAMRRLMQGFGL 269
+ +
Sbjct: 234 SNLKHFPNKAKHWLNV 249
>gi|92113464|ref|YP_573392.1| glutamate racemase [Chromohalobacter salexigens DSM 3043]
gi|91796554|gb|ABE58693.1| glutamate racemase [Chromohalobacter salexigens DSM 3043]
Length = 267
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSG+GGL V+ +R +P YV D+ PYG D L R++
Sbjct: 1 MTAPILIFDSGVGGLSVVGALRARLPGAALAYVCDNAALPYGTKPDAWLVARIVAACRAA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ V+ACNTA TL LR + ++ +G VPAIK AA +SG+ +L+T AT
Sbjct: 61 VAASGACALVVACNTASTLALQALRESL-TVPVIGTVPAIKPAAQLLRSGVFGLLATSAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + + C + +++ L ++ E G E I + E
Sbjct: 120 VSRPYTQRLIGEFATHCTVIRLAADPLVAQAERVLAGRAPDEAVIAASLAPL---WEAPD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PL+ +P V W+D+ D+IARR ++ + + +
Sbjct: 177 LDTVVLGCTHFPLLRETLAAQAPRDVRWIDSGDAIARRVAQVVTPAPCNMPGAGES---W 233
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
S + R + +G +
Sbjct: 234 ASAPHRPGLARALAEYGFSA 253
>gi|254453816|ref|ZP_05067253.1| glutamate racemase [Octadecabacter antarcticus 238]
gi|198268222|gb|EDY92492.1| glutamate racemase [Octadecabacter antarcticus 238]
Length = 269
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 56/266 (21%), Positives = 99/266 (37%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL ++ +P+ F+Y AD PYG + + D
Sbjct: 2 AVGIFDSGLGGLTVLDAVQQRLPDVPFVYYADSANAPYGVRTADDIYNLTTAATQALFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGA-VPAIKQAAAYTQ----------SG 121
L ++ACNTA ++ ++ LG VP I+ +
Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPKDKRVLGVFVPLIEAMTERSWGDNSPPREVGVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEGQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ D VL CTHYP++ F+ V +D +A L R
Sbjct: 179 A--LKRKMPEPDAAVLGCTHYPMMQDAFQAALGADVKVFSQADLVADSLADYLQRRPEMV 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
SG P R Q
Sbjct: 237 G--GGTSKFLTSGDPKRVSDRATQFL 260
>gi|124025384|ref|YP_001014500.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. NATL1A]
gi|167017318|sp|A2C175|MURI_PROM1 RecName: Full=Glutamate racemase
gi|123960452|gb|ABM75235.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. NATL1A]
Length = 265
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 11/254 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG VL+K+ L P FIY+AD PYG ++ +KK + S
Sbjct: 3 IGLFDSGIGGFTVLKKVIELCPNNSFIYLADTARLPYGVKTNNEIKKIAEEISSWF-RYQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ACNT + D +++ + I AA+ Q + +L+TP+T+R
Sbjct: 62 NIDAFLVACNTTNAIALDVIKNNLD----IPVFDLIGSAASNIQESRVGVLATPSTVRTK 117
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+N I + + + +E I D+I G ++ +
Sbjct: 118 AYTNAILEFKPKTFVIEQPCPAFVPMIE----MDNINSDDITDVATGYLQPLLKQKIHSL 173
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INTHQTRVFDDHALFLS 253
+L C+HYPLI R++ P V +D +++++ + + + N + + F D +++
Sbjct: 174 ILGCSHYPLITSSLRKVLPSSVKLIDPAEALSFKLKFFIDSKTRNYSKNKNFVDLKFYVT 233
Query: 254 GKPDIAMRRLMQGF 267
+
Sbjct: 234 SNLKNFSNKAKHWL 247
>gi|261368271|ref|ZP_05981154.1| glutamate racemase [Subdoligranulum variabile DSM 15176]
gi|282569788|gb|EFB75323.1| glutamate racemase [Subdoligranulum variabile DSM 15176]
Length = 271
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 99/257 (38%), Gaps = 4/257 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL ++++R ++P +Y D PYG+ + + +L
Sbjct: 3 KRPIGVFDSGLGGLTAVRQLRRVLPGEDIVYFGDTGRVPYGSRARDTIVQYARQDIRFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + AC T + E + P A + A A T++ I I+ T AT+
Sbjct: 63 SQ-DVKFIIAACGTVSSTFPPEEAARLPVPYTGVVGAASRAAVAATRNRKIGIIGTAATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + +I + I + + VE ++ + I
Sbjct: 122 RSGSYAAVIRDMMPDVQITAKACPLFVPLVENGY--VQDGNPVTQLVISDYLESVRAAGI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-LF 251
D ++L CTHYPL+ + V +D+ A+ A L ++ R A +
Sbjct: 180 DTLILGCTHYPLLKKMIGDYVGESVTLIDSGKVTAQAAAAALADLDLLNGRSEGGTARYY 239
Query: 252 LSGKPDIAMRRLMQGFG 268
+S PD + M G
Sbjct: 240 VSDTPDNFAEQEMLFLG 256
>gi|163746582|ref|ZP_02153940.1| glutamate racemase, putative [Oceanibulbus indolifex HEL-45]
gi|161380467|gb|EDQ04878.1| glutamate racemase, putative [Oceanibulbus indolifex HEL-45]
Length = 269
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 56/266 (21%), Positives = 101/266 (37%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V K++ +PE F+Y+AD PYG + + D
Sbjct: 2 AVGIFDSGLGGLTVWNKVQERLPEVDFVYLADSAHAPYGVRNADDIYNLTCAAVQRLFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ + LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQEGWIPREKRVLGVFVPLIEAMTERQWGDNSPPREVAVN 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELSFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ D +L CTHYPL+ F+ V ++ +A L R
Sbjct: 179 A--LKRKMPNPDAAILGCTHYPLMQEAFQAALGAEVKVFSQAELVAASLADYLERH--PN 234
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ A +G P R Q
Sbjct: 235 MMGSGEAAFLTTGDPARVSDRATQFL 260
>gi|301597891|ref|ZP_07242899.1| glutamate racemase [Acinetobacter baumannii AB059]
Length = 197
Score = 242 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 5/202 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L
Sbjct: 1 MNNNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S+++ + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T
Sbjct: 61 SNLVTQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +LI +Y + LV + LA ++E E+K +E
Sbjct: 120 ATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----YTAEVKDYLENILAPLV 175
Query: 189 GKRTDVIVLACTHYPLIVHVFR 210
++ D I+L CTHYP + +
Sbjct: 176 EQKVDTIILGCTHYPFVSDTIQ 197
>gi|293401254|ref|ZP_06645398.1| glutamate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305380|gb|EFE46625.1| glutamate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 239
Score = 242 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 4/239 (1%)
Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88
L+++R MP+ ++Y D PYG E + +R + + ++ VIACNTA
Sbjct: 2 LKELRRWMPKERYLYFGDSAFAPYGEKERDIITQRCLHICDKLV-HIGVKAIVIACNTAT 60
Query: 89 TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148
+ +ELR +P + +G PA+K A + + +++T TL+ +L+ Y Q
Sbjct: 61 SACVEELRKRYPQLPIVGMEPALKPAVEGKEHQQVIVMATHFTLKEKKFEHLMSRYRKQH 120
Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
I+ + + L VE ++K ++ + D IVL CTH+
Sbjct: 121 CIYKLPTPKLVEIVEH---DQLENTTLVEKTLQDYLAPYDLSHIDSIVLGCTHFVFFKEQ 177
Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
R + V +D + +R + LL NT Q L+ D A L +
Sbjct: 178 IRHIVKDKVTLVDGNAGTSRHVKELLSEKNTLQKESGHAKVTILNSSDDPAYITLSEKL 236
>gi|301596669|ref|ZP_07241677.1| glutamate racemase [Acinetobacter baumannii AB059]
Length = 256
Score = 242 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 110/245 (44%), Gaps = 11/245 (4%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86
V ++ +P +Y AD PYG D +++ D L + ++V+ACNT
Sbjct: 2 SVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAV-DWLYRQGCKIAVVACNT 60
Query: 87 AFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145
A D LR + +G VPA+K A T+S ++++L+TPAT R +++ +
Sbjct: 61 ASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKFA 120
Query: 146 --SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP 203
+ + ++S+ L VE + + +++ ++ + D +VL CTHYP
Sbjct: 121 VPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ----PAVEQGADYLVLGCTHYP 176
Query: 204 LIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---LFLSGKPDIAM 260
+ L +D+ ++AR+ +L + ++ + A ++SG +
Sbjct: 177 FLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIRQNVARIECYVSGNNADVL 236
Query: 261 RRLMQ 265
+ ++Q
Sbjct: 237 QPVLQ 241
>gi|84684746|ref|ZP_01012646.1| Glutamate racemase [Maritimibacter alkaliphilus HTCC2654]
gi|84667081|gb|EAQ13551.1| Glutamate racemase [Rhodobacterales bacterium HTCC2654]
Length = 270
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 109/273 (39%), Gaps = 23/273 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +PE F+Y D+ PYG + + S + D+
Sbjct: 2 AVGIFDSGLGGLTVLDAVTKRLPEVPFVYFGDNAHTPYGVRDADDIYNLTTKAVSRLWDE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ P LG + +A + G
Sbjct: 62 G-CDLVILACNTASAAALRRMQESWIPPDKRVLGVFVPLIEALTERKWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + + ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILADALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ + +L CTHYP++ VF++ V + +A L R
Sbjct: 179 A--LKRKMPNPEAAILGCTHYPIMEDVFQEALGPEVTVYSQASLVAASLADYLERHPKM- 235
Query: 242 TRVFDDHALFLSGKPDI----AMRRLMQGFGLK 270
+ +GKP+ A R L + +
Sbjct: 236 IGSGTESKFLTTGKPEKVSAGATRFLRRKIAFE 268
>gi|326570331|gb|EGE20375.1| glutamate racemase [Moraxella catarrhalis BC1]
Length = 285
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 128 QATLQGQLLAQVIHKVATSKGITVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
+ D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243
Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265
+ + + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|58336762|ref|YP_193347.1| gluracemase [Lactobacillus acidophilus NCFM]
gi|227903323|ref|ZP_04021128.1| glutamate racemase [Lactobacillus acidophilus ATCC 4796]
gi|75433023|sp|Q5FLV8|MURI_LACAC RecName: Full=Glutamate racemase
gi|58254079|gb|AAV42316.1| gluracemase [Lactobacillus acidophilus NCFM]
gi|227868952|gb|EEJ76373.1| glutamate racemase [Lactobacillus acidophilus ATCC 4796]
Length = 267
Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 104/266 (39%), Gaps = 16/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG GGL V +K+ +P I++ D+ PYG+ +
Sbjct: 1 MDNRP--------IGLLDSGFGGLSVAKKVIEKLPNESTIFIGDNAHIPYGDRTREDIIN 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+K L VIACNTA + ++ AA T++
Sbjct: 53 LTRRSVKFLLEK-NVKLIVIACNTATAVAMPTMQKEVEQQIIGVIQSGALAAARTTKNKN 111
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+++++T T+ I + + +++ LA VE K ++
Sbjct: 112 VAVVATNVTVASHAYQKEIKFRDPEIKVTELAAPKLAPLVEAQK-----DYATNLKVVKE 166
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP-VDWLDNSDSIARRARCLLPRINTHQ 241
GK D +VL CTHYPLI F + V LD +D +A+ ++ R
Sbjct: 167 SLAPLMGKEFDTLVLGCTHYPLIQKEFEEAINNKEVTILDPADQVAQYTFNVMRRDGLFS 226
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
H + +G + +L + F
Sbjct: 227 DSEKAVHEYYTTGNSETF-DKLARTF 251
>gi|226324711|ref|ZP_03800229.1| hypothetical protein COPCOM_02497 [Coprococcus comes ATCC 27758]
gi|225207159|gb|EEG89513.1| hypothetical protein COPCOM_02497 [Coprococcus comes ATCC 27758]
Length = 260
Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats.
Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 10/243 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I I+DSGIGGL VL + MPE FIY AD PYG +K + + + ++ K
Sbjct: 3 IGIYDSGIGGLSVLHRALKKMPEAEFIYYADTKHVPYGEKTREQIKGYVEEVLNFLIAK- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133
+ VIACNTA ++ E R F ++ +G PA+K+A Q I + +TP T+
Sbjct: 62 EVDAIVIACNTATSVATKEFRGEF-AVPIVGMEPAVKRALKLYQDMQKRILVTATPVTIA 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+L+ ++ + L L E + ++ E+ K ++ +
Sbjct: 121 GEKLHSLLEKVDTEHEVDLAPLPKLVRFAEAG----RFQDPEVDKYLKNSLQSYTLNQYA 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+ FR++ P + ++D ++ R+ R +LP T + S
Sbjct: 177 AVVLGCTHFNYFKQSFRKIFPGEIHFVDGNEGTLRQLRRVLPEQTT--PGEPSKVTYYFS 234
Query: 254 GKP 256
G+P
Sbjct: 235 GEP 237
>gi|326573641|gb|EGE23600.1| glutamate racemase [Moraxella catarrhalis CO72]
Length = 285
Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats.
Identities = 75/267 (28%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 128 QATLQGQLLAQVIHKVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
+ D++VL CTHYP + + LD+ +IA+R R LL
Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVRSLLDCFGISADG 243
Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265
+ + + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|89067791|ref|ZP_01155245.1| Glutamate racemase [Oceanicola granulosus HTCC2516]
gi|89046761|gb|EAR52816.1| Glutamate racemase [Oceanicola granulosus HTCC2516]
Length = 270
Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 19/264 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL+ ++ +PE F+Y+AD PYG + + + + +
Sbjct: 2 AVGIFDSGLGGLTVLEAVQKRLPEVPFVYMADSAHAPYGVRDADDIYDLTTASVARLFEA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L+++ACNTA ++ ++ P+ LG + +A Q G
Sbjct: 62 G-CDLAILACNTASAAALRRMQESWVPPNKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+R + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVRARAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ D VL CTHYPL+ VF+ V+ ++ +A L R
Sbjct: 179 ALL--RKMPEPDAAVLGCTHYPLMAEVFQDALGAGVNVFSQANLVAESLADYLERRPEMI 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQ 265
A +G P R Q
Sbjct: 237 GEGTQG-AFLTTGDPKRVSSRATQ 259
>gi|326560827|gb|EGE11193.1| glutamate racemase [Moraxella catarrhalis 46P47B1]
gi|326561925|gb|EGE12260.1| glutamate racemase [Moraxella catarrhalis 7169]
gi|326567030|gb|EGE17153.1| glutamate racemase [Moraxella catarrhalis 12P80B1]
Length = 285
Score = 241 bits (617), Expect = 7e-62, Method: Composition-based stats.
Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
+ D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243
Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265
+ + + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|209966583|ref|YP_002299498.1| glutamate racemase [Rhodospirillum centenum SW]
gi|209960049|gb|ACJ00686.1| glutamate racemase [Rhodospirillum centenum SW]
Length = 280
Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats.
Identities = 66/277 (23%), Positives = 102/277 (36%), Gaps = 26/277 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+ + +P F+Y+ D PYGN + + + +
Sbjct: 2 IGVFDSGHGGLTVLRALVDALPGRSFVYLGDHAHAPYGNRTPEEIYGLTVAAVERLFAQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGA----------------VPAIKQA 114
L V+ACNTA L L+ T+ P LG +PA + A
Sbjct: 62 -CRLVVLACNTASALALRRLQQTWLPCHHPDRRVLGVLVPMVEAITGVPWMADIPAGRHA 120
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
++I +T T++ I + + + LA +EE A +I+
Sbjct: 121 GEP---RSVAIFATRRTVQSQAYPREIGKRAPEVEVVQQACPDLARLIEEDAPEAEIRR- 176
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+++ + E ++L CTHYPL+ F P VD LD AR L
Sbjct: 177 AVRRYTASLMDKLEHGTPSAVMLGCTHYPLVAGEFAAALPAGVDVLDQPALCARSLVHYL 236
Query: 235 PRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R +G R + FG +
Sbjct: 237 ARHPEFDDDGGAPVTFLTTGDAAKVTRLATRFFGRPA 273
>gi|326569565|gb|EGE19619.1| glutamate racemase [Moraxella catarrhalis BC8]
Length = 285
Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats.
Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
+ D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243
Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265
+ + + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|255263591|ref|ZP_05342933.1| glutamate racemase [Thalassiobium sp. R2A62]
gi|255105926|gb|EET48600.1| glutamate racemase [Thalassiobium sp. R2A62]
Length = 269
Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats.
Identities = 56/266 (21%), Positives = 101/266 (37%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +P+ F+Y AD PYG + + + + D
Sbjct: 2 AVGVFDSGLGGLTVLSAVAARLPDVPFVYYADSAHAPYGVRDAEDIFQLTEKAVRHLWD- 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FPS-MAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ P LG + +A G
Sbjct: 61 NGCDLVILACNTASAAALRRMQEAGVPDGKRVLGVFVPLIEALTERDWGDNSPPREVDVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAVGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ D +L CTHYPL+ +F+ V L +D +A L R
Sbjct: 179 A--LKRKMPTPDAAILGCTHYPLMQDIFQAALGPDVRVLSQADLVADSLADYLERRPAMA 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G PD R Q
Sbjct: 237 GGGEP--RFLTTGDPDQVSVRATQFL 260
>gi|326563047|gb|EGE13321.1| glutamate racemase [Moraxella catarrhalis 103P14B1]
gi|326577286|gb|EGE27174.1| glutamate racemase [Moraxella catarrhalis 101P30B1]
Length = 285
Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats.
Identities = 75/267 (28%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
+ D++VL CTHYP + + LD+ +IA+R R LL
Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVRSLLDCFGISADG 243
Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265
+ + + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|326578047|gb|EGE27911.1| glutamate racemase [Moraxella catarrhalis O35E]
Length = 285
Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats.
Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 128 QATLQGQLLAQVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
+ D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243
Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265
+ + + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|326572368|gb|EGE22361.1| glutamate racemase [Moraxella catarrhalis BC7]
Length = 285
Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats.
Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLAELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 69 VDWLCRQGCKLIVIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
+ D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243
Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265
+ + + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|83942612|ref|ZP_00955073.1| glutamate racemase [Sulfitobacter sp. EE-36]
gi|83953853|ref|ZP_00962574.1| glutamate racemase [Sulfitobacter sp. NAS-14.1]
gi|83841798|gb|EAP80967.1| glutamate racemase [Sulfitobacter sp. NAS-14.1]
gi|83846705|gb|EAP84581.1| glutamate racemase [Sulfitobacter sp. EE-36]
Length = 269
Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 99/266 (37%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V ++ +P+ F+Y+AD PYG + + D
Sbjct: 2 AVGIFDSGLGGLTVWDAVQAQLPDVDFVYLADSAHAPYGVRNADDIYNLTTAATQRLFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ + LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQEGWIPSDKRVLGVFVPLIEAMTERQWGDNSPPREVDLK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + E ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DFILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ + +L CTHYPL+ F+ V ++ +A L R
Sbjct: 179 A--LKRKMPAPEAAILGCTHYPLMQETFQDALGPDVKVFSQANLVAHSLSDYLKRH--PN 234
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ A +G P R Q
Sbjct: 235 MLGTGEAAFLTTGDPKKVSSRATQFL 260
>gi|169824250|ref|YP_001691861.1| glutamate racemase [Finegoldia magna ATCC 29328]
gi|167831055|dbj|BAG07971.1| glutamate racemase [Finegoldia magna ATCC 29328]
Length = 261
Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 14/253 (5%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++K N I DSG+GGL V +K++ LMP +IY AD PYG+ + K +
Sbjct: 3 SKQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGSKTREQMIKISENI 62
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126
++ Q L V+ACNT ++ +RS + +G V +K A T + + ++
Sbjct: 63 VRFF-NEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQTTSNKKVGVI 120
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT+ L+ + + + + VEE +++I K++E
Sbjct: 121 ATKATVDNGLYKKLLEQ--NDIEVCQSACLDFVGFVEEDCK----DKEKILKKVEEYLKP 174
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D I+L CTHYP+++ ++ + + ++D +DS++ + +
Sbjct: 175 IVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSEDIYEI-----CGNYQNKC 229
Query: 247 DHALFLSGKPDIA 259
D +++ P
Sbjct: 230 DIKYYVTKNPSDF 242
>gi|71892359|ref|YP_278093.1| glutamate racemase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796465|gb|AAZ41216.1| glutamate racemase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 277
Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 6/252 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +ILI DSG+GGL + +R L+P ++Y D+ FPYG + + R+ + +
Sbjct: 10 QPTILILDSGVGGLSIYIAIRKLLPHVRYLYFFDNQAFPYGEHSEFFIINRVTSIIEAVQ 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q L +I CNTA + L++ F +G +PAIK A+ T++G+I +L+T T+
Sbjct: 70 EQHQLDLVIIGCNTASVVSLKILQNHFLC-PIVGVIPAIKLASKLTKNGVIGVLATHRTV 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
YT +LI + ++ + L+ + L + E G KI ++ + K+
Sbjct: 129 NHDYTLSLIKRFANKYKVMLLGTSELVNLAESKIHGKKIPISILRDILTPWLNMKQP--P 186
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF---DDHA 249
D IVL CTH+ L+ +D+ S+A+ + LL + T F +
Sbjct: 187 DTIVLGCTHFSLLKTELIAALSSNSYLIDSRHSVAKYSFRLLRKNTNSPTNDFCSYRPNK 246
Query: 250 LFLSGKPDIAMR 261
++ S + A++
Sbjct: 247 IYCSMNTEKAIK 258
>gi|315648405|ref|ZP_07901504.1| glutamate racemase [Paenibacillus vortex V453]
gi|315276099|gb|EFU39445.1| glutamate racemase [Paenibacillus vortex V453]
Length = 267
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 65/242 (26%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GGL VL +P+ F++ AD + PYG +K + + +
Sbjct: 3 IAFFDSGLGGLTVLSAAMRELPQEDFLFFADTLHVPYGTKAKEDVKSYIHDAI-KTIMQE 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133
+ VIACNTA ++ ELR T+P + +G PA+K A +S I + +TP TLR
Sbjct: 62 EVKAIVIACNTATSMAISELRRTYP-IPIIGMEPAVKPAVEINRSSGKRILVFATPLTLR 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +L+ S + + L E KI ++++G +
Sbjct: 121 ESKYRDLVRRVDSMHIVDSLPLPELVEYCEALNFDQKIMNAYFTEKLDG----FDLNEYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + L P + +D S R +L + + D L S
Sbjct: 177 TVVLGCTHYPFYKKILSDLLPEHIQIIDGSTGTVNRLIQVLRANDLLSSSGTQDVRLLNS 236
Query: 254 GK 255
+
Sbjct: 237 SQ 238
>gi|254463861|ref|ZP_05077272.1| glutamate racemase [Rhodobacterales bacterium Y4I]
gi|206684769|gb|EDZ45251.1| glutamate racemase [Rhodobacterales bacterium Y4I]
Length = 269
Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 100/266 (37%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ DK
Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVEFLYYGDNAHAPYGVRDAENIYQLTKAAMEDMWDK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRS-TFP-SMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ P LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQEGGLPQGKRVLGVFVPLIEALTERQWGDNSPPREVEVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ + +L CTHYPL+ F+ V +A L R
Sbjct: 179 A--LKRKMPHPEAAILGCTHYPLMEQTFQAALGPEVKVFSQGSLVADSLADYLKRHPGML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P R Q
Sbjct: 237 GNGAGG--FYTTGNPGRVSDRATQFL 260
>gi|310780269|ref|YP_003968601.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
gi|309749592|gb|ADO84253.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
Length = 261
Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 10/255 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V++++ ++PE IY D+ F Y N +++ M + ++
Sbjct: 4 IGVFDSGVGGITVVKEINKILPEDTIIYYGDNKNFHYENLSVDQIREHCMKIVEFLVL-N 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPATLRR 134
V+AC+ A D L+S F + +G + K T + I I +TPAT+
Sbjct: 63 GVDAVVVACSVATAAALDTLKSRFAHIPIVGVIDTGAKVGVEMTSNNSIGIFATPATVAM 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + L +E+ ++ +K+ + ++TD
Sbjct: 123 DAYPKALRNINRKISVFQKGCPKLCYMIEDGWEDTLENDEVVKEYL-----SYIPEQTDT 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALFLS 253
++L CTHYPLI HV + +D++ A + L + + D ++S
Sbjct: 178 LLLGCTHYPLIRHVIARYFKG--TIVDSAKETADTVKKELFLKAGKSKKNKNGDPEYYIS 235
Query: 254 GKPDIAMRRLMQGFG 268
G G
Sbjct: 236 GDIKKFKEVAADFLG 250
>gi|303234940|ref|ZP_07321565.1| glutamate racemase [Finegoldia magna BVS033A4]
gi|302494058|gb|EFL53839.1| glutamate racemase [Finegoldia magna BVS033A4]
Length = 261
Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 14/253 (5%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++K N I DSG+GGL V +K++ LMP +IY AD PYG+ + K +
Sbjct: 3 SKQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGSKTREQMIKISENI 62
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126
++ Q L V+ACNT ++ +RS + +G V +K A T + + ++
Sbjct: 63 VRFF-NEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQATYNKKVGVI 120
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT+ L+ + + + + VEE +++I K++E
Sbjct: 121 ATKATVDNGLYKKLLEQ--NDIEVCQSACLDFVGFVEEDCK----DKEKILKKVEEYLKP 174
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D I+L CTHYP+++ ++ + + ++D +DS++ + +
Sbjct: 175 IVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSEDIYEI-----CGNYQNKC 229
Query: 247 DHALFLSGKPDIA 259
D +++ P
Sbjct: 230 DIKYYVTKNPSDF 242
>gi|188582653|ref|YP_001926098.1| glutamate racemase [Methylobacterium populi BJ001]
gi|179346151|gb|ACB81563.1| glutamate racemase [Methylobacterium populi BJ001]
Length = 286
Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 103/246 (41%), Positives = 150/246 (60%), Gaps = 2/246 (0%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + + L R++ +
Sbjct: 13 QNAQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGAFTEERLVSRVIAVME 72
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++ P L VIACNTA TL+ LR F F+G VP IK AAA T+S LIS+L+TP
Sbjct: 73 RLLARHAPDLVVIACNTASTLVLPALRQRF-VTPFVGVVPPIKPAAALTRSRLISLLATP 131
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T+ R YT +L+ ++ + C + LV S LA E G + + + EI CF+E+ +
Sbjct: 132 GTVARAYTHDLVRNFAAHCAVTLVGSKNLAGYAEAEMAGEPVSDAALLAEIAPCFVEQAD 191
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G+RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL +
Sbjct: 192 GRRTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAQAPEAPPAR 251
Query: 249 ALFLSG 254
A+F G
Sbjct: 252 AVFTGG 257
>gi|78066994|ref|YP_369763.1| glutamate racemase [Burkholderia sp. 383]
gi|77967739|gb|ABB09119.1| glutamate racemase [Burkholderia sp. 383]
Length = 286
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 72/261 (27%), Positives = 107/261 (40%), Gaps = 10/261 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+ +R +P+ FIYVAD PYG ++ + +R + + + L
Sbjct: 15 APIGIFDSGLGGLSVLRAVRAQLPDESFIYVADSHHAPYGPRDEAFITERTLAI-GEWLA 73
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ VIACNTA R SM +G P IK AAA + SG+ +L+T +TL
Sbjct: 74 REGAKALVIACNTATARAIAATREHL-SMPLVGVEPGIKPAAAVSASGVAGVLATQSTLN 132
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ Y + L +E ++ ++ D
Sbjct: 133 SPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALLDSYLQPMLDDGAD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHAL 250
+VL CTHYP R L + +D SD+IAR+ +L + TR
Sbjct: 189 TLVLGCTHYPFFTETIRDLVGDRLTLVDTSDAIARQLVRVLDERHLRAPAGTRAAPP-RF 247
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
+ GL +
Sbjct: 248 CSTSDGRQLQALASTLLGLAA 268
>gi|296112421|ref|YP_003626359.1| glutamate racemase MurI [Moraxella catarrhalis RH4]
gi|295920115|gb|ADG60466.1| glutamate racemase MurI [Moraxella catarrhalis RH4]
Length = 285
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + L
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEIL-FLTLQA 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D L + L +IACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 69 VDWLCRQGCKLIIIACNSASAYSLTTLRIRCR-IPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
+ D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 187 ---QGVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243
Query: 244 --VFDDHALFLSGKPD---IAMRRLMQ 265
+ + + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|30248466|ref|NP_840536.1| aspartate and glutamate racemase:glutamate racemase [Nitrosomonas
europaea ATCC 19718]
gi|30138352|emb|CAD84360.1| Aspartate and glutamate racemases:Glutamate racemase [Nitrosomonas
europaea ATCC 19718]
Length = 271
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 8/255 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL V + R L+P F+YVAD PYG+ E + +R+ + +++
Sbjct: 6 VGIFDSGVGGLAVYRAARKLLPHQAFVYVADSGFAPYGSRESAYIIRRVTEIADALVNNG 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA LR+ + S+ +G PAIK AAA +++G I +L+T T
Sbjct: 66 AKAL-VVACNTATVTTVTALRAKY-SLPIIGIEPAIKPAAAISRNGRIVVLTTRRTAESE 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L Y + I L LA +VE I +E+K+ + DV+
Sbjct: 124 AVAQLCVRYGTHVQIMLQPCPGLADQVEAG----NIDGEEVKEMLRQYLAPAVSLANDVV 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFLS- 253
VL CTH+ + + L+ V ++ S+++AR+ L + A + +
Sbjct: 180 VLGCTHFTFLADQIQNLAGPQVTIIEPSEAVARQLAHRLSSSKMISVNQAQAAEAFYTTA 239
Query: 254 GKPDIAMRRLMQGFG 268
P + + G
Sbjct: 240 ASPSAVGDIMSKLLG 254
>gi|310816545|ref|YP_003964509.1| Glutamate racemase [Ketogulonicigenium vulgare Y25]
gi|308755280|gb|ADO43209.1| Glutamate racemase [Ketogulonicigenium vulgare Y25]
Length = 270
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 99/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +P+ +Y D+ PYG + + + D
Sbjct: 2 AVGVFDSGLGGLTVLDAVAKRLPDLPLVYFGDNAHAPYGVRTSDDIYNLTVSATQKLFD- 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ + LG + +A Q G
Sbjct: 61 NGCDLVILACNTASAAALKRMQENWVPEGKRVLGVFVPLIEALTERQWGDNTAPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DLILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ R D +L CTHYPL+ VF V ++ +A L R
Sbjct: 179 A--LKRKMPRPDAAILGCTHYPLMEKVFADALGDGVQVFSQANLVAESLADYLQRHPEMV 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P +Q
Sbjct: 237 GPGMES-KFLTTGDPARVSSHAIQFL 261
>gi|84515579|ref|ZP_01002941.1| Glutamate racemase [Loktanella vestfoldensis SKA53]
gi|84510862|gb|EAQ07317.1| Glutamate racemase [Loktanella vestfoldensis SKA53]
Length = 270
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 98/266 (36%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ +Y+ D PYG + + D
Sbjct: 2 AVGIFDSGLGGLTVLDAVAKRLPDVPLVYLGDSAHAPYGVRTPDDIYNLTTAATQRLFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPQGKRVLGVFVPLIEALTERQWGDNSPPREVAIK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ ++ D VL CTHYPL+ VF+ ++ +A L R
Sbjct: 179 A--LRRKMPNPDAAVLGCTHYPLMEKVFQDALGPQAKVFSQANLVAESLADYLSRRPEMV 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
D A +G P R Q
Sbjct: 237 G-TGRDSAFLTTGDPARVSARATQFL 261
>gi|302338969|ref|YP_003804175.1| glutamate racemase [Spirochaeta smaragdinae DSM 11293]
gi|301636154|gb|ADK81581.1| glutamate racemase [Spirochaeta smaragdinae DSM 11293]
Length = 261
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 7/244 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I FDSGIGGL LQ +R +P + + Y+AD FPYG L ++
Sbjct: 2 KNTGPIAFFDSGIGGLPYLQWVRKKLPNFSYRYLADRANFPYGEKSIEELGGLIIGSMER 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+++ P + V+ACNTA +LR TF S+ F+G VPAIK AAA + + I +L+T
Sbjct: 62 YIERVDPSIVVVACNTASVTALQKLRDTF-SVPFVGVVPAIKPAAALSCTHTIGLLATKR 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ YT NL+ + + + + + VE + + EI++ + K
Sbjct: 121 TVEDPYTDNLVRLFADGFQVERFAGVDIVDFVENHLLDAEPH--EIREVLAPAVAFFSEK 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+ + + V +D+ + + R ++ +
Sbjct: 179 EVDTLVLGCTHFLHVRDEIAEAFGGRVKIVDSIEGVGRHVIQMVSEYHG----GGGGGEF 234
Query: 251 FLSG 254
F+SG
Sbjct: 235 FVSG 238
>gi|320530742|ref|ZP_08031786.1| glutamate racemase [Selenomonas artemidis F0399]
gi|320137029|gb|EFW28967.1| glutamate racemase [Selenomonas artemidis F0399]
Length = 262
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 5/250 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL R +P+ F++ AD PYG ++ + F ++++
Sbjct: 3 IALFDSGLGGLTVLGHARRALPDEEFLFFADRDHVPYGTKTVDEVRGFVRDAFRFLVEEE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA ++ DE+R + + +G PA+K+A ++ + + TP T+R
Sbjct: 63 RAEAVVIACNTATSVSADEMRRRY-DIPIIGMEPAVKKALDADRTRRVLVTGTPITVRGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +Y + + L+ L E + +++ + + + I
Sbjct: 122 KLHRLIDTYDANHLVDLLPLPRLVEFAENQ----EFVSPHVEEYLRTALAPFDFAQYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ R L P + + D +D + F SG+
Sbjct: 178 VLGCTHFNFFKDTMRSLMPETMTFADGNDGTVEELARRAGLTTQPEGERTAHCTFFRSGR 237
Query: 256 PDIAMRRLMQ 265
+ + L +
Sbjct: 238 RVVGAQELAR 247
>gi|163736577|ref|ZP_02143996.1| Glutamate racemase [Phaeobacter gallaeciensis BS107]
gi|161390447|gb|EDQ14797.1| Glutamate racemase [Phaeobacter gallaeciensis BS107]
Length = 269
Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 101/266 (37%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL ++ +P+ F+Y D+ PYG + + + D+ K
Sbjct: 2 AVGIFDSGLGGLTVLNAVQERLPDVDFLYYGDNAHAPYGVRDAEDIYQLTKAAVEDMWSK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121
L V+ACNTA ++ P LG + +A Q G
Sbjct: 62 G-CNLVVLACNTASAAALRRMQENGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ +L CTHYPL+ +F+ V +A L R Q
Sbjct: 179 A--LKRKMPEPQAAILGCTHYPLMEEIFQAALGADVQVFSQGRLVADSLADYLERH--PQ 234
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P R Q
Sbjct: 235 MMGQGQGGFYTTGVPARVSDRATQFL 260
>gi|163732003|ref|ZP_02139449.1| glutamate racemase, putative [Roseobacter litoralis Och 149]
gi|161394301|gb|EDQ18624.1| glutamate racemase, putative [Roseobacter litoralis Och 149]
Length = 269
Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 102/266 (38%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
S+ IFDSG+GGL VL ++ +P+ F Y+AD PYG + + + D
Sbjct: 2 SVGIFDSGLGGLTVLDAVQTRLPDVSFAYLADSAHAPYGVRTADDIYDLTCRSVARLFDT 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 G-CNLVILACNTASAAALRRMQESWVPDDKRVLGVFVPLIEAMTERQWGDNSPPREVGVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMMLAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ D +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 179 A--LQRKMPTPDAAILGCTHYPLMQDIFQKALGENVRVFSQANLVADSLADYLERHPKMH 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G P R Q
Sbjct: 237 GTGSP--VFLTTGDPGRVSDRATQFL 260
>gi|302380932|ref|ZP_07269394.1| glutamate racemase [Finegoldia magna ACS-171-V-Col3]
gi|302311310|gb|EFK93329.1| glutamate racemase [Finegoldia magna ACS-171-V-Col3]
Length = 261
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 14/253 (5%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++K N I DSG+GGL V +K++ LMP +IY AD PYG+ + K +
Sbjct: 3 SKQKPYNKIGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGSKTREQMIKISENI 62
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126
++ Q L V+ACNT ++ +RS + +G V +K A T + + ++
Sbjct: 63 VRFF-NEQQIDLLVVACNTLTSIALSHMRS-IANFDIIGVVEYGVKSALQTTSNKKVGVI 120
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ST AT+ L+ + + + + VEE +++I K++E
Sbjct: 121 STKATVDNGLYKKLLEQ--NDIGVCQSACLDFVGFVEEDCK----DKEKILKKVEEYLKP 174
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D I+L CTHYP+++ ++ + + ++D +DS++ + +
Sbjct: 175 IVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSEDVYEI-----CGNYQNKC 229
Query: 247 DHALFLSGKPDIA 259
D +++ P
Sbjct: 230 DIKYYVTKNPSDF 242
>gi|238927873|ref|ZP_04659633.1| glutamate racemase [Selenomonas flueggei ATCC 43531]
gi|238884206|gb|EEQ47844.1| glutamate racemase [Selenomonas flueggei ATCC 43531]
Length = 262
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 62/250 (24%), Positives = 100/250 (40%), Gaps = 5/250 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL R ++P FI+ AD PYG A++ + F ++++
Sbjct: 3 IALFDSGYGGLTVLSHARRVLPSEEFIFYADRDHVPYGTKSVPAVRGFVRTAFRFLIEQQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++ DE+R + + +G PA+K+A + + +TP T+
Sbjct: 63 RADAVVVACNTATSVAVDEMRRLY-DVPIIGMEPAVKKALTRDADHRVLVTATPITVHGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI S + L++ L E + ++ + F I
Sbjct: 122 KLKRLISSCDPNGLVDLLALPQLVEFAERQ----EFVSSAVEAYLRDAFAPYRFADYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ RQL P V +D ++ F SG+
Sbjct: 178 VLGCTHFNYFKDTMRQLLPQNVRLVDGNEGTVEELARRTGLRTQPIGAQTAHCTFFESGR 237
Query: 256 PDIAMRRLMQ 265
P + L
Sbjct: 238 PVVRAEELAH 247
>gi|163742776|ref|ZP_02150161.1| glutamate racemase [Phaeobacter gallaeciensis 2.10]
gi|161384031|gb|EDQ08415.1| glutamate racemase [Phaeobacter gallaeciensis 2.10]
Length = 269
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 101/266 (37%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL ++ +P+ F+Y D+ PYG + + + D+ K
Sbjct: 2 AVGIFDSGLGGLTVLNAVQERLPDVDFLYYGDNAHAPYGVRDAEDIYQLTKAAVEDMWSK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121
L V+ACNTA ++ P LG + +A Q G
Sbjct: 62 G-CNLVVLACNTASAAALRRMQEDGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ +L CTHYPL+ +F+ V +A L R Q
Sbjct: 179 A--LKRKMPEPQAAILGCTHYPLMEEIFQAALGADVQVFSQGRLVADSLADYLERH--PQ 234
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P R Q
Sbjct: 235 MMGQGQGGFYTTGVPARVSDRATQFL 260
>gi|149194034|ref|ZP_01871132.1| glutamate racemase [Caminibacter mediatlanticus TB-2]
gi|149135987|gb|EDM24465.1| glutamate racemase [Caminibacter mediatlanticus TB-2]
Length = 245
Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 13/252 (5%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
IFDSG+GGL V +++ IY D PYGN + + + + + L +
Sbjct: 5 GIFDSGVGGLSVAREILKSKLFDEIIYFGDTARVPYGNKNESTIIRYSLECL-EFLKNFN 63
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRT 135
V+ACN+A ++ +ELR S +G + A IK ++ I ++ T T+ +
Sbjct: 64 IDFLVVACNSASSVAIEELRKEV-SFPVVGVIEAGIKAIENENKNSNILLIGTKRTISSS 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
N + S +I +++ +L VEE KI +D E F + ++ D+I
Sbjct: 123 KYQNALISL-GFKNIISIATPLLVPLVEEGIVEGKIVDD----IFEMYFRNLDKEKIDII 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYP + F++ P + + +I + LL + + + ++ S
Sbjct: 178 ILGCTHYPFLEKSFKKHFP-NAKLIHSGQAIVK----LLKKEYNLKPKQISKIEIYASDN 232
Query: 256 PDIAMRRLMQGF 267
+ + +
Sbjct: 233 VEEVRKIAKKWL 244
>gi|114766197|ref|ZP_01445197.1| Glutamate racemase [Pelagibaca bermudensis HTCC2601]
gi|114541568|gb|EAU44611.1| Glutamate racemase [Roseovarius sp. HTCC2601]
Length = 270
Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 98/255 (38%), Gaps = 19/255 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +PE F+Y AD PYG + + + +
Sbjct: 2 AVGVFDSGLGGLTVLDAVSKRLPEVPFVYFADSAHAPYGVRDADDIYNLTTAAVERLWEA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQESWIPRDKRVLGVFVPLIEAMTERQWGDNSPPREVAVQ 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+R + + + L +EE + + E ++ ++
Sbjct: 121 HVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGLVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ +L CTHYPL+ F++ V ++ +A L R
Sbjct: 179 A--LKRKMPSPQAAILGCTHYPLMQETFQEALGEDVAVYSQANLVAESLADYLQRHPGM- 235
Query: 242 TRVFDDHALFLSGKP 256
+G P
Sbjct: 236 IGTGTTSRFLTTGDP 250
>gi|260433846|ref|ZP_05787817.1| glutamate racemase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417674|gb|EEX10933.1| glutamate racemase [Silicibacter lacuscaerulensis ITI-1157]
Length = 269
Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 98/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y AD PYG + + D+ +
Sbjct: 2 AVGIFDSGLGGLTVLNAAQTRLPDVDFLYYADSAHAPYGVRDAEDIYNLTRNAVQDLWSR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ P LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQEEGVPQGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ +L CTHYPL+ F+ V D +A L R
Sbjct: 179 A--LKRKMPHPQAAILGCTHYPLMAEAFQAALGPDVQVFSQGDLVAESLADYLQRHPGML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P R Q
Sbjct: 237 G--TGEAGFLTTGDPKKVSDRATQFL 260
>gi|297587459|ref|ZP_06946103.1| possible glutamate racemase [Finegoldia magna ATCC 53516]
gi|297574148|gb|EFH92868.1| possible glutamate racemase [Finegoldia magna ATCC 53516]
Length = 261
Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 14/252 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++K N I DSG+GGL V +K++ LMP+ +IY AD PYG+ + +
Sbjct: 4 KQKPYNKIGFVDSGLGGLTVFKKVKKLMPDKEYIYFADSANVPYGSKTRDQML-MISENI 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILS 127
++ Q L V+ACNT ++ D ++S + +G V +K A T + + +++
Sbjct: 63 VRFFNEQQIDLLVVACNTLTSIALDYMKS-IANFDIIGVVEYGVKSAIKTTSNKKVGVIA 121
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ L+ + + S VEE +D+I +++E
Sbjct: 122 TKATVDNGLYKKLLEQ--QGVEVCQSACFDFVSFVEEDCK----DKDKILEKVEEYLKPI 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D I+L CTHYP+++ +Q + + ++D +DS++ + + D
Sbjct: 176 VDFGADTIILGCTHYPILIEYLKQYTGENITFVDPADSLSEDVFEI-----CGNYQNKCD 230
Query: 248 HALFLSGKPDIA 259
F++ P
Sbjct: 231 TKYFVTKNPSDF 242
>gi|254510376|ref|ZP_05122443.1| glutamate racemase [Rhodobacteraceae bacterium KLH11]
gi|221534087|gb|EEE37075.1| glutamate racemase [Rhodobacteraceae bacterium KLH11]
Length = 269
Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 99/266 (37%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y AD PYG + + + D+
Sbjct: 2 AVGIFDSGLGGLTVLNAAQKRLPDVDFLYYADSAHAPYGVRDAEDIYNLTRAAVQGLWDR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ LG + +A Q G
Sbjct: 62 G-CNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVEVQ 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRGHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ +L CTHYPL+ F+Q V D +A L R
Sbjct: 179 A--LKRKMPEPQAAILGCTHYPLMAETFQQALGPHVKVYSQGDLVAESLADYLQRHPNML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+GKP + R Q
Sbjct: 237 GEGAGG--YLTTGKPGVVTDRATQFL 260
>gi|37521065|ref|NP_924442.1| glutamate racemase [Gloeobacter violaceus PCC 7421]
gi|81710349|sp|Q7NKI2|MURI_GLOVI RecName: Full=Glutamate racemase
gi|35212061|dbj|BAC89437.1| glutamate racemase [Gloeobacter violaceus PCC 7421]
Length = 265
Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats.
Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 9/251 (3%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+++ +P IY AD PYG+ + + + + ++
Sbjct: 4 GLFDSGLGGLTVLREIARRLPAQPVIYFADTARLPYGSRTPAEICRYVREILHWF-EQQG 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
++ACNT+ L + S + +G + A AA + I +++T AT++
Sbjct: 63 VQRVLMACNTSSALALPVVASEYALK--VGGLIAPAARAAARRGRRIGVIATAATVQSHA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ I + + + V+ VE G ++ +E++ +R D +V
Sbjct: 121 YTRAIQALTPRAQVWEVACPEFVPLVE----GGRLLGEEVRSVARRYLAPLVEQRIDTLV 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
CTHYP + V L P V +D + + LP +TR F+SG P
Sbjct: 177 YGCTHYPYLAPVIGDLLPASVRCVDPAVAAVAELAAALPPSRRLETRAA--CHFFVSGDP 234
Query: 257 DIAMRRLMQGF 267
+
Sbjct: 235 VRFAQAAYPWL 245
>gi|313896052|ref|ZP_07829606.1| glutamate racemase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975477|gb|EFR40938.1| glutamate racemase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 262
Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 5/250 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL R +P+ F++ AD PYG ++ + F ++++
Sbjct: 3 IALFDSGLGGLTVLGHARRALPDEEFLFFADRDHVPYGTKTVDEVRGFVRDAFRFLVEEE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA ++ DE+R + + +G PA+K+A ++ + + TP T+R
Sbjct: 63 RVEAIVIACNTATSVSADEMRRCY-DIPIIGMEPAVKKALDADRTRRVLVTGTPITVRGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +Y + + L+ L E + +++ + + + I
Sbjct: 122 KLHRLIDTYDANHLVDLLPLPRLVEFAENQ----EFVSPHVEEYLRTALAPFDLAQYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ R L P + + D +D + F SG+
Sbjct: 178 VLGCTHFNFFKDTMRSLMPETMTFADGNDGTVEELARRAGLTTQPEGERTAHCTFFRSGR 237
Query: 256 PDIAMRRLMQ 265
+ L +
Sbjct: 238 RVAGAQELAR 247
>gi|224372568|ref|YP_002606940.1| glutamate racemase [Nautilia profundicola AmH]
gi|223588690|gb|ACM92426.1| glutamate racemase [Nautilia profundicola AmH]
Length = 245
Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 12/253 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSGIGGL V ++ IY D PYGN + + + + + L +
Sbjct: 5 GVFDSGIGGLSVASELLKSKLFDEIIYFGDTARVPYGNKNESTIIRYSLEAL-EFLKNFD 63
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACN+A ++ DELR +G + A +A ++ I + T T++
Sbjct: 64 IDFLVVACNSASSVAIDELRREA-GFPVVGVIEAGVKALDAAKTSNILLTGTKRTIQSNK 122
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
N++ Q +I V++ + VEE KI + + E F + + D ++
Sbjct: 123 YQNMLLDLGYQ-NIISVATPLFVPLVEEGITEGKI----VDEVFELYFGDIDKSSIDYVI 177
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYP + F++ P + + +I LL + + LF S P
Sbjct: 178 LGCTHYPFLAKSFKKHFP-NAKLIHSGQAIV----ELLKNEYGLKEKSDTSIKLFASDNP 232
Query: 257 DIAMRRLMQGFGL 269
+ + + L
Sbjct: 233 EELRSKAKEWLNL 245
>gi|110680409|ref|YP_683416.1| glutamate racemase, putative [Roseobacter denitrificans OCh 114]
gi|123172245|sp|Q163W3|MURI_ROSDO RecName: Full=Glutamate racemase
gi|109456525|gb|ABG32730.1| glutamate racemase, putative [Roseobacter denitrificans OCh 114]
Length = 269
Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
S+ IFDSG+GGL VL ++ +P+ F Y+AD PYG + + + D
Sbjct: 2 SVGIFDSGLGGLTVLDAVQTRLPDMPFAYLADSAHAPYGVRTADDIYDLTCQSVARLFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 G-CNLVILACNTASAAALRRMQESWVPEDKRVLGVFVPLIEAMTERQWGDNSPPREVGVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMMLAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ D +L CTHYPL+ +F++ V ++ +A L R +
Sbjct: 179 A--LQRKMPTPDAAILGCTHYPLMQDIFQKALGENVRVFSQANLVADSLADYLERHPGMR 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G P R Q
Sbjct: 237 GTGSP--VFLTTGDPARVSDRATQFL 260
>gi|329907999|ref|ZP_08274775.1| Glutamate racemase [Oxalobacteraceae bacterium IMCC9480]
gi|327546835|gb|EGF31763.1| Glutamate racemase [Oxalobacteraceae bacterium IMCC9480]
Length = 275
Score = 237 bits (607), Expect = 8e-61, Method: Composition-based stats.
Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 13/273 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ P I +FDSGIGGL VL+ +R +P+ +Y +D PYG + +++
Sbjct: 1 MTTTPM--AANAPIGVFDSGIGGLSVLRHIRANLPQEALLYFSDAQFAPYGGRPEQQIEE 58
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + + +L +Q V+ACN+A LR +P++ +G P +K AAA + S +
Sbjct: 59 RALAIGA-LLVAHQVKALVVACNSATAAAIAALRHAYPALIVVGVEPGLKPAAAVSASRI 117
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEI 180
+ +L+T ATL + L + + + ++ LA R+E+ + + +
Sbjct: 118 VGVLATEATLASERFARLRMTLSAATGVTFLAQPCPGLALRIEQ----DSMHLPDAMALL 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRARCLLPR 236
+ + D +VL CTHYP + ++ V +D ++AR+ L
Sbjct: 174 RSFVLPLLDQGADTLVLGCTHYPFVQEQIAAIASAHSTNSVTLIDTGAAVARQLASQLHI 233
Query: 237 INTHQTRVFDDHALFLSGKPDIAMRRLMQGFGL 269
+ A S R ++ GL
Sbjct: 234 QGLLRQDGAPSVAGLSSANAVDLERAFLRLLGL 266
>gi|325273239|ref|ZP_08139520.1| glutamate racemase [Pseudomonas sp. TJI-51]
gi|324101626|gb|EGB99191.1| glutamate racemase [Pseudomonas sp. TJI-51]
Length = 187
Score = 237 bits (607), Expect = 9e-61, Method: Composition-based stats.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + DSG+GGL VL +++ L+P +YVAD PYG +++R +
Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPNETLLYVADCGHVPYGEKSPDYIRERCRRIAGFFR 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL
Sbjct: 65 EQGAKAL-VLACNTATVAAAADLRELYPNWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E + +++ + G
Sbjct: 124 QSAKFAALLDRFASDVLVITQPCPGLVELIETG----DLCSPTLRQMLWGYVEPLLAAGC 179
Query: 193 DVIVLACT 200
D ++L CT
Sbjct: 180 DTLILGCT 187
>gi|159044309|ref|YP_001533103.1| glutamate racemase [Dinoroseobacter shibae DFL 12]
gi|189030360|sp|A8LMF7|MURI_DINSH RecName: Full=Glutamate racemase
gi|157912069|gb|ABV93502.1| glutamate racemase [Dinoroseobacter shibae DFL 12]
Length = 273
Score = 237 bits (607), Expect = 9e-61, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 102/266 (38%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +PE F+Y D++ PYG + + + S + D+
Sbjct: 2 AVGVFDSGLGGLTVLDAVSRRLPEVPFVYYGDNLHAPYGVRDAEDVYELTTGAVSRLWDE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPSDKRVLGVFVPLIEALTERQWGDNSPPREVAIK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + + E ++ +E
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQPCGGVVDAIEDG--DMILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ + +L CTHYPL+ VF+ V + +A L R
Sbjct: 179 A--LKRRMPHPEAAILGCTHYPLMQDVFQDALGADVKVYSQAQLVAESLADYLTRHPDML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P + Q
Sbjct: 237 GLGAEP-GFLTTGDPKSVSNKATQFL 261
>gi|332558385|ref|ZP_08412707.1| glutamate racemase [Rhodobacter sphaeroides WS8N]
gi|332276097|gb|EGJ21412.1| glutamate racemase [Rhodobacter sphaeroides WS8N]
Length = 270
Score = 237 bits (607), Expect = 9e-61, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 99/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + + +
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ T+ LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 179 A--LKRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFA 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P + Q
Sbjct: 237 G-AGTESKFLTTGDPRSVSNKATQFL 261
>gi|77463505|ref|YP_353009.1| glutamate racemase [Rhodobacter sphaeroides 2.4.1]
gi|123591864|sp|Q3J276|MURI_RHOS4 RecName: Full=Glutamate racemase
gi|77387923|gb|ABA79108.1| glutamate racemase [Rhodobacter sphaeroides 2.4.1]
Length = 270
Score = 237 bits (607), Expect = 9e-61, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 99/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + + +
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ T+ LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 179 A--LKRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFA 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P + Q
Sbjct: 237 GDGTES-KFLTTGDPRSVSNKATQFL 261
>gi|91228520|ref|ZP_01262441.1| glutamate racemase [Vibrio alginolyticus 12G01]
gi|91187896|gb|EAS74207.1| glutamate racemase [Vibrio alginolyticus 12G01]
Length = 204
Score = 237 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 7/206 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLVSRVNQLVSSLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLLASKG-VGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+ K + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGNSVSLDELTKILLPL-----RDKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218
DV VL CTH+PLI Q V
Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGGDVT 204
>gi|306820477|ref|ZP_07454113.1| glutamate racemase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551552|gb|EFM39507.1| glutamate racemase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 271
Score = 237 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 67/258 (25%), Positives = 107/258 (41%), Gaps = 22/258 (8%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I IFDSG+G VL K+ +MP ++IY D PYG L+K
Sbjct: 1 MDNRP--------IGIFDSGVGAFSVLNKLVEVMPNENYIYFGDSGHNPYGQKTAEELQK 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ D L + + VIACNTA D L+ + + +G + P K+A T++
Sbjct: 53 LCSCIV-DFLTRKEVKAIVIACNTATVAALDYLQERY-YLPIIGVINPGAKEALRLTKNN 110
Query: 122 LISILSTPATLRRTYTSNLIHS---YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
I + ST T + N I+ ++ S+ LA+ +E E IK+
Sbjct: 111 KIGVCSTVFTAKTHGYLNDINKVSNNDKSLKVYEEGSVNLANIIENGFEYNDENEAIIKE 170
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ + D ++L CTHYPL+ +F + +D A AR +L N
Sbjct: 171 -----LVGRFTDNIDTLILGCTHYPLVEDLFAKYFKGN--IVDPGMQTAIEARNILKAKN 223
Query: 239 THQTRVFD-DHALFLSGK 255
+ +++
Sbjct: 224 MLTDSSDNYKVQYYVTKD 241
>gi|56696751|ref|YP_167112.1| glutamate racemase [Ruegeria pomeroyi DSS-3]
gi|81558534|sp|Q5LS93|MURI_SILPO RecName: Full=Glutamate racemase
gi|56678488|gb|AAV95154.1| glutamate racemase [Ruegeria pomeroyi DSS-3]
Length = 269
Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 102/266 (38%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL+ + +PE F+Y AD PYG + + D+ ++
Sbjct: 2 AVGIFDSGLGGLTVLEAAQKRLPEVEFLYYADSAHAPYGVRTPDDIFQLTRAAVHDLWNR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ P LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQEEGVPPGKRVLGVFVPLIEALTERQWGDNSPPREVEVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 NVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DLILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ +L CTHYPL+ +F+ V + +A L R
Sbjct: 179 A--LKRKMPYPQAAILGCTHYPLMEPIFQDALGPDVRVFSQGNLVADSLADYLERH--PN 234
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
R +GKP R Q
Sbjct: 235 MRGSGAAGYLTTGKPATVSNRATQFL 260
>gi|116074593|ref|ZP_01471854.1| Glutamate racemase [Synechococcus sp. RS9916]
gi|116067815|gb|EAU73568.1| Glutamate racemase [Synechococcus sp. RS9916]
Length = 265
Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 101/257 (39%), Gaps = 12/257 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+ + +Y+ D PYG+ ++ + + L
Sbjct: 6 GLFDSGVGGLTVLRSILQRHGPVPTVYLGDTARVPYGSRSPAEIRSIAAEVVA-WLKHQH 64
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L ++ + +G + A T + +L+TPAT+
Sbjct: 65 VSTVVMACNTTNALA-RDVAEGQAGVPVVGLIGAAAAMVRET---RVGVLATPATVASGA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I + + + +E + E+++E G + ++
Sbjct: 121 YRQSIEALNPGTLVVQQACPNFVPLIESG----DLSSQELREEAMGYLTPLLEASVEAVI 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALFLS 253
L CTHYPL+ + R L P V +D ++ +AR+ LL + ++ L ++
Sbjct: 177 LGCTHYPLLEPLLRSLLPPDVRLIDPAEGVARQLDALLGYPIPGRPERPLSLENTRLCVT 236
Query: 254 GKPDIAMRRLMQGFGLK 270
P+ RR G +
Sbjct: 237 ADPESFARRATPWLGAR 253
>gi|85703353|ref|ZP_01034457.1| Glutamate racemase [Roseovarius sp. 217]
gi|85672281|gb|EAQ27138.1| Glutamate racemase [Roseovarius sp. 217]
Length = 270
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 103/266 (38%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V + +P+ F+Y+ D+ PYG + + +
Sbjct: 2 AVGIFDSGLGGLTVWDAVSKRLPDVPFVYLGDNAHTPYGVRDADDIYDLTTTSVDRLFAA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+R + + + + +EE + + E ++ ++
Sbjct: 121 NVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ + VL CTHYPL+ VF+ V + +A L R ++
Sbjct: 179 A--LKRKMPHPEAAVLGCTHYPLVQEVFQDALGPDVAVYSQPNLVASSLADYLGRH-PNK 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ A +G P R Q
Sbjct: 236 IGAGTESAFLTTGDPKRVSSRATQFL 261
>gi|161870616|ref|YP_001599789.1| glutamate racemase [Neisseria meningitidis 053442]
gi|161596169|gb|ABX73829.1| glutamate racemase [Neisseria meningitidis 053442]
gi|325198860|gb|ADY94316.1| glutamate racemase [Neisseria meningitidis G2136]
Length = 239
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 94/232 (40%), Gaps = 8/232 (3%)
Query: 39 YHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRST 98
+ IY D PYG ++ M + +L+ + VIACNT + ++R
Sbjct: 2 ENIIYFGDTARVPYGTKSKATIENFSMQIVDFLLE-HDVKAMVIACNTIAAVAGQKIRQK 60
Query: 99 FPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI 157
+M L + A K A A T++ I I++T T+ + IH + ++ +
Sbjct: 61 TGNMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPL 120
Query: 158 LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
L VEE ++ + + ++ + D +VL CTH+PL+ + + + V
Sbjct: 121 LVPLVEEGWLEHEVTRLTVCEYLKPLLAD----GIDTLVLGCTHFPLLKPLIGREA-HNV 175
Query: 218 DWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
+D++ + A +L + T D+ ++S P + G
Sbjct: 176 ALVDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 227
>gi|126462361|ref|YP_001043475.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17029]
gi|189030365|sp|A3PK37|MURI_RHOS1 RecName: Full=Glutamate racemase
gi|126104025|gb|ABN76703.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17029]
Length = 270
Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + + +
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ T+ LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 179 A--LKRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFA 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G+P + Q
Sbjct: 237 G-AGTESKFLTTGEPRSVSNKATQFL 261
>gi|146276946|ref|YP_001167105.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17025]
gi|189030366|sp|A4WQY6|MURI_RHOS5 RecName: Full=Glutamate racemase
gi|145555187|gb|ABP69800.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17025]
Length = 270
Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 99/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + + +
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFALTCAATERLWAE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALKRMQESWIPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ F++ V ++ +A L R
Sbjct: 179 A--LKRRMPHPQAAILGCTHYPLMEATFQEALGPEVTVYSQANLVAESLADYLARRPEFV 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +G P + Q
Sbjct: 237 GQGTES-KFLTTGDPRSVSNKATQFL 261
>gi|292669543|ref|ZP_06602969.1| glutamate racemase [Selenomonas noxia ATCC 43541]
gi|292648752|gb|EFF66724.1| glutamate racemase [Selenomonas noxia ATCC 43541]
Length = 262
Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 5/240 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL R ++P F++ AD PYG A++ + F ++++
Sbjct: 3 IALFDSGIGGLTVLSHARRVLPSEDFLFFADRDHVPYGTKSVPAVRGFVREAFHFLVEQQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++ DE+R + ++ +G PA+K+A + + +TP T+
Sbjct: 63 KADTVVVACNTATSVAVDEMRRLY-AVPIIGMEPAVKKALERDTERRVLVTATPITVNGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +Y + I L++ L EE + ++ + + I
Sbjct: 122 KLRRLISAYDTGGCIDLLALPRLVEFAEE----REFVSPRVENYLRSALAPYDLINYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ RQ+ P V ++D ++ F SG+
Sbjct: 178 VLGCTHFNYFKDTLRQIMPQTVGFVDGNEGTVEELARRTNLRTVPAGERKAHCTFFESGR 237
>gi|126737902|ref|ZP_01753632.1| glutamate racemase [Roseobacter sp. SK209-2-6]
gi|126721295|gb|EBA17999.1| glutamate racemase [Roseobacter sp. SK209-2-6]
Length = 269
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 100/266 (37%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y AD PYG + + + +++ K
Sbjct: 2 AVGIFDSGLGGLTVLNAAQSRLPDVDFLYYADSARAPYGVRDAEDIYQLTKKAVAEMWSK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ P LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQEEGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVEVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DLILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ +L CTHYPL+ F+ V +A L R Q
Sbjct: 179 A--LKRKMPEPQAAILGCTHYPLMEQDFQAALGEGVKVFSQGALVADSLADYLERH--PQ 234
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
F +G P R Q
Sbjct: 235 MLGSGTGGYFTTGDPAKVSNRATQFL 260
>gi|320095955|ref|ZP_08027573.1| glutamate racemase [Actinomyces sp. oral taxon 178 str. F0338]
gi|319977112|gb|EFW08837.1| glutamate racemase [Actinomyces sp. oral taxon 178 str. F0338]
Length = 275
Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 21/273 (7%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I IFDSG+GGL V + + +P+ +Y+ D PYG ++
Sbjct: 1 MDNAP--------IGIFDSGLGGLTVARAVIDKLPDEEVVYLGDTRHTPYGPRPVAQVRT 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYT 118
+ L +IACNTA + R + + + + PA +QA T
Sbjct: 53 YTLACLDQ-LASMGVKALIIACNTATAAALADARERYWVDAGIPVIEVITPAARQAVTAT 111
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++G I ++ T AT++ S+++ + V + VE E++
Sbjct: 112 RNGRIGVIGTRATIQSEAYSHVLAA-VPGLSLTQRECPRFVEFVEAGIT----TGAELEA 166
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRI 237
+ D +VL CTHYPL+ V ++ V + +S++ A L R
Sbjct: 167 VATQYLAPLKEAGVDTLVLGCTHYPLLTGVIGRVMGEEVALVTSSEATANLTYNELVDRD 226
Query: 238 NTHQTR--VFDDHALFLSGKPDIAMRRLMQGFG 268
H+ R H + +G R + G
Sbjct: 227 LLHEPRGGASPRHHFYSTGGSGDFGRLARRFLG 259
>gi|297205618|ref|ZP_06923014.1| glutamate racemase [Lactobacillus jensenii JV-V16]
gi|297150196|gb|EFH30493.1| glutamate racemase [Lactobacillus jensenii JV-V16]
Length = 265
Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 98/266 (36%), Gaps = 17/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P + VL+K+ +P +++ D PYG+ + +
Sbjct: 1 MDNRPIGLLDSGLGGL--------TVLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L K + + ACNTA + ++ + +G + AA T++
Sbjct: 53 LTRKSVDFLLSK-NVKVIIFACNTATAAAMEVIQKEI-APKIIGVIQSGSLAAAKITKNN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++++ T T+ S I + +++ LA VE D ++ ++
Sbjct: 111 KVAVIGTHVTIESHAYSKEIKFRNPDIKVTELATPKLAPLVEAQ-RDFAYNVDVVRDSLD 169
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+GK D +VL CTHYP+I ++ + +D +D +A+ +L R
Sbjct: 170 S----LKGKDFDTMVLGCTHYPIIEKEISEIVGSTIKLVDPADQVAQYTENILKRDGMLA 225
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
H + +G +
Sbjct: 226 GEK-GKHEYYTTGDCKKFTEIARKWL 250
>gi|86138828|ref|ZP_01057400.1| glutamate racemase [Roseobacter sp. MED193]
gi|85824475|gb|EAQ44678.1| glutamate racemase [Roseobacter sp. MED193]
Length = 269
Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL+ + +P+ F+Y AD PYG + + +D+ K
Sbjct: 2 AVGIFDSGLGGLTVLKAAQSRLPDVDFLYYADSARAPYGVRDAEDIFNLTKAAVNDMWSK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ P LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQEEGLPAGKRVLGVFVPLIEAMTERQWGDNSPPREVEVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGIVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ + +L CTHYPL+ F+ V + +A L R
Sbjct: 179 A--LKRKMPEPEAAILGCTHYPLMEKEFQAALGAGVKVFSQGNLVADSLADYLDRHPDMI 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ F +G P R Q
Sbjct: 237 G--TGNGGYFTTGDPARVSDRATQFL 260
>gi|123965917|ref|YP_001010998.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9515]
gi|123200283|gb|ABM71891.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9515]
Length = 264
Score = 235 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 11/258 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I IFDSGIGG +L + + Y+AD PYG+ + ++ + +
Sbjct: 1 MKVKIGIFDSGIGGFTILDYLLKTRKDLEIFYLADTKRVPYGDKDFEQIRIIAKEICNWF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
DK L V ACNT D L + + I + I +L+TPAT
Sbjct: 61 EDKNLDALLV-ACNTTNACALDILENHLG----IPVFDLINSVSEIVSKKCIGVLATPAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +Y +I S + + S +E+ K+ +++ + K
Sbjct: 116 IKTSYYKKIIESKGENIKVFQQACPEFVSEIEK----TKLNLNKLNYLSDSYLNPLFKKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ I+L CTHYPLI +V P + +D S ++ + L+P+ + + + ++
Sbjct: 172 IEEIILGCTHYPLIFNVLENKIPSNIKIIDPSVALVNKFNNSFLIPKNDCNNSISQENVK 231
Query: 250 LFLSGKPDIAMRRLMQGF 267
F++ K + +++
Sbjct: 232 FFVTSKSEEFSKKVKYWL 249
>gi|315606165|ref|ZP_07881193.1| glutamate racemase [Actinomyces sp. oral taxon 180 str. F0310]
gi|315312123|gb|EFU60212.1| glutamate racemase [Actinomyces sp. oral taxon 180 str. F0310]
Length = 276
Score = 235 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 99/264 (37%), Gaps = 14/264 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P+ IY+ D PYG+ ++ + ++
Sbjct: 3 NAPIGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGSRAIAQVRSLTLSALDELA 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYTQSGLISILST 128
+ L + NTA + R + + + + PA +Q+ + T++ + ++ T
Sbjct: 63 SRGVKALVIAC-NTATAAALADARERYWIDAGIPVIEVITPAARQSVSATRNRHVGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + + V + + VE DEI+ +
Sbjct: 122 KATIQSEAYLRALAA-VPGLRVTQQACPAFVDFVEAGVT----TGDEIEAVATEYLTPLK 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH----QTRV 244
D ++L CTHYPL+ V ++ V + +S++ A L
Sbjct: 177 AAGVDTLILGCTHYPLLTGVISRVMGDGVTLVTSSEATANMTYNELVDRALLHDPWSEGA 236
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
+H +G D + G
Sbjct: 237 RPEHQFLATGASDAFPLLARRFLG 260
>gi|256852216|ref|ZP_05557602.1| glutamate racemase [Lactobacillus jensenii 27-2-CHN]
gi|260661752|ref|ZP_05862663.1| glutamate racemase [Lactobacillus jensenii 115-3-CHN]
gi|282932656|ref|ZP_06338070.1| glutamate racemase [Lactobacillus jensenii 208-1]
gi|256615262|gb|EEU20453.1| glutamate racemase [Lactobacillus jensenii 27-2-CHN]
gi|260547499|gb|EEX23478.1| glutamate racemase [Lactobacillus jensenii 115-3-CHN]
gi|281303230|gb|EFA95418.1| glutamate racemase [Lactobacillus jensenii 208-1]
Length = 265
Score = 235 bits (602), Expect = 4e-60, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 98/266 (36%), Gaps = 17/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P + VL+K+ +P +++ D PYG+ + +
Sbjct: 1 MDNRPIGLLDSGLGGL--------TVLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+L K + + ACNTA + ++ + +G + AA T++
Sbjct: 53 LTRKSVDFLLSK-NVKVIIFACNTATAAAMEVIQKEI-APQIIGVIQSGSLAAAKITKNN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++++ T T+ S I + +++ LA VE D ++ ++
Sbjct: 111 KVAVIGTHVTIESHAYSKEIKFRNPDIKVTELATPKLAPLVEAQ-RDFAYNVDVVRDSLD 169
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+GK D +VL CTHYP+I ++ + +D +D +A+ +L R
Sbjct: 170 S----LKGKDFDTMVLGCTHYPIIEKEISEIVGSTIKLVDPADQVAQYTENILKRDGMLA 225
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
H + +G +
Sbjct: 226 GEK-GKHEYYTTGDCKKFTEIARKWL 250
>gi|148242257|ref|YP_001227414.1| glutamate racemase [Synechococcus sp. RCC307]
gi|147850567|emb|CAK28061.1| Glutamate racemase [Synechococcus sp. RCC307]
Length = 292
Score = 235 bits (602), Expect = 4e-60, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 98/253 (38%), Gaps = 10/253 (3%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+++ P +YV D PYG+ + ++ + L +
Sbjct: 32 GLFDSGLGGLTVLRRLLSQRPGQRCVYVGDTARVPYGSRDRAEIRCIAAEVVG-WLREQG 90
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L D +S + LG + A+ A Q I +L+T AT
Sbjct: 91 AEAVVMACNTTNALALDVAQSEA-GVPVLGLIDAV---ARQVQQQRIGVLATEATASSGA 146
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ + I + VE + ++ +++ + R + IV
Sbjct: 147 YGRALQAQRQGLTIVEMGCPAFVPAVEAH----QLDTPALRRAAQRYLEPLLDARVEAIV 202
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFLSGK 255
L C+HYPL+ + R L P V+ +D + ++ L P + +G
Sbjct: 203 LGCSHYPLLEPMLRDLLPAGVELIDPAHALVDLTLSLFPDQRRPAIEPDLSGCRVVATGD 262
Query: 256 PDIAMRRLMQGFG 268
P + G
Sbjct: 263 PAEFAAGSARWLG 275
>gi|260575249|ref|ZP_05843249.1| glutamate racemase [Rhodobacter sp. SW2]
gi|259022509|gb|EEW25805.1| glutamate racemase [Rhodobacter sp. SW2]
Length = 270
Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 99/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL ++ +PE F+Y+ D+ PYG + + +
Sbjct: 2 AVGVFDSGLGGLTVLDALQKRLPEVPFVYLGDNAHAPYGVRTAEDIFNLTCAAVERLWAE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ P LG + +A Q G
Sbjct: 62 G-CDLVILACNTASASALKRMQESWVPPGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ VL CTHYPL+ H+F + V ++ +A L R
Sbjct: 179 A--LKRRMPLPQAAVLGCTHYPLMQHIFAEALGPGVKVYSQANLVAESLADYLTRRPEFL 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G P R Q
Sbjct: 237 GSGTAS-KFLTTGDPAAVSNRATQFL 261
>gi|296116308|ref|ZP_06834924.1| glutamate racemase [Gluconacetobacter hansenii ATCC 23769]
gi|295977127|gb|EFG83889.1| glutamate racemase [Gluconacetobacter hansenii ATCC 23769]
Length = 278
Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats.
Identities = 92/259 (35%), Positives = 137/259 (52%), Gaps = 4/259 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL FDSGIGGL +++ +R +P Y+AD FPYG D L R++ L + +
Sbjct: 3 ILAFDSGIGGLGIVRCLRTDLPGARIDYLADTAVFPYGEQADDFLVTRILTLVGQAIARL 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L VIACNTA TL D LR+ + F+G VP IK AA TQSG I +L+T ATL R
Sbjct: 63 RPDLVVIACNTASTLALDALRARHR-LPFVGCVPPIKWAADLTQSGTIGLLATRATLTRP 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y SNL + + C + + LA E G + E I+ E++G F + G DV+
Sbjct: 122 YLSNLRNRFAPGCTLITYGARNLADLSELAFRGRPVPERAIRMEMDGLFSQPGGDAIDVV 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDHALFLS 253
L CTHY ++ F++L + W+D + +++R+A L + T + HA F +
Sbjct: 182 GLGCTHYTFLLDRFQRLGRPGLRWIDPAQAVSRQATRLAHNLGTVAAKGPYQPGHAFFTA 241
Query: 254 GKPDI-AMRRLMQGFGLKS 271
D+ A+ ++ G +
Sbjct: 242 LPQDMGALLPGLRHMGYDA 260
>gi|257784875|ref|YP_003180092.1| glutamate racemase [Atopobium parvulum DSM 20469]
gi|257473382|gb|ACV51501.1| glutamate racemase [Atopobium parvulum DSM 20469]
Length = 277
Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 7/230 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+ + MP F Y D PYG + +R + +D+
Sbjct: 11 IGVFDSGVGGMSVLKHLVAQMPHETFHYFGDSAFAPYGTKPKEQIAQRSSVIAKKFIDEG 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA DELR+ +P ++ +G PA+K A G + +L+T ATL
Sbjct: 71 AKAL-VIACNTATAAAADELRAAYPYLSIVGVEPALKPAVTAYPHGTVIVLATKATLSLQ 129
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL + + L +E + +++ K + G+ D +
Sbjct: 130 KYHNLESRLHPSAKVISIPGEGLVELIESG----QTDSEQLHKRLTELLGGYTGQ-VDAV 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
VL CTHYP I + V++ D A + + LL + N ++
Sbjct: 185 VLGCTHYPFIKKQISSVLG-NVEFFDGGAGAAHQLKRLLKQANLLTSKEN 233
>gi|304438688|ref|ZP_07398626.1| glutamate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304368337|gb|EFM22024.1| glutamate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 262
Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 5/250 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL R ++P FI+ AD PYG A++ + F ++++
Sbjct: 3 IALFDSGYGGLTVLSHARRVLPSEEFIFYADRDHVPYGTKSVPAVRGFVRTAFRFLIEQQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++ DE+R + + +G PA+K+A + + +TP T+
Sbjct: 63 RADAVVVACNTATSVAVDEMRRLY-DVPIIGMEPAVKKALTRDAEHRVLVTATPITVHGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI S + L++ L E + ++ + F I
Sbjct: 122 KLKRLISSCDPNGLVDLLALPQLVEFAERQ----EFVSSAVEAYLRDAFAPYRFADYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ RQL P V +D ++ F SG+
Sbjct: 178 VLGCTHFNYFKDTMRQLLPQNVRLVDGNEGTVEELARRTGLRTQPIGAQTAHCTFFESGR 237
Query: 256 PDIAMRRLMQ 265
+ L
Sbjct: 238 SIVRAEELAH 247
>gi|154507589|ref|ZP_02043231.1| hypothetical protein ACTODO_00069 [Actinomyces odontolyticus ATCC
17982]
gi|153797223|gb|EDN79643.1| hypothetical protein ACTODO_00069 [Actinomyces odontolyticus ATCC
17982]
Length = 276
Score = 234 bits (599), Expect = 7e-60, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 98/264 (37%), Gaps = 14/264 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P+ IY+ D PYG ++ + ++
Sbjct: 3 NAPIGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGPRAIAQVRSLTLSALDELA 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYTQSGLISILST 128
+ L + NTA + R + + + + PA +Q+ T++ + ++ T
Sbjct: 63 SRGVKALVIAC-NTATAAALADARERYWIDAGIPVVEVITPAARQSVIATRNHHVGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + + V + + VE +EI+ +
Sbjct: 122 KATIQSEAYLRALAA-VPGLTVSQQACPAFVDFVEAGVT----TGEEIEAVAREYLTPLK 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----V 244
D ++L CTHYPL+ V ++ V + +S++ A L
Sbjct: 177 EAGVDTLILGCTHYPLLTGVIGRIMGERVTLVTSSEATANVTYNELVDRGLLHDPWPAGE 236
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
H +G D+ R + G
Sbjct: 237 GPQHQFLATGASDLFPRLARRFLG 260
>gi|332185464|ref|ZP_08387212.1| glutamate racemase [Sphingomonas sp. S17]
gi|332014442|gb|EGI56499.1| glutamate racemase [Sphingomonas sp. S17]
Length = 286
Score = 234 bits (599), Expect = 8e-60, Method: Composition-based stats.
Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 3/257 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL FDSG+GGL + R +P F+YVAD GFPYG + + R+ L + +
Sbjct: 26 RPILFFDSGVGGLSIAGPARMALPTAPFVYVADSAGFPYGEKSEAEIAGRVPALLGRLAE 85
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+Y+P L VIACNTA T+ +R+ + +G VPAIK AA +++ I +L T AT+R
Sbjct: 86 RYRPRLIVIACNTASTIALPAVRAAL-DLPVVGTVPAIKPAALMSETRTIGVLGTRATVR 144
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ Y +L + S C + S L E G + + ++G F ++ G+ D
Sbjct: 145 QAYVDDLAARFASDCRVIRHGSAALVELAEAKLRGETLSSESFTAVLDGLFGQEGGEAID 204
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
VIV ACTH+PL+ +P PV ++D IARR L + R + A+F
Sbjct: 205 VIVNACTHFPLVEAELAAAAPHPVRFVDGGPGIARRIAFLTQGQDWPADR-GEGVAVFTH 263
Query: 254 -GKPDIAMRRLMQGFGL 269
G+ + A+R + G
Sbjct: 264 LGEREAALRPGLALRGF 280
>gi|293189259|ref|ZP_06607982.1| glutamate racemase [Actinomyces odontolyticus F0309]
gi|292821722|gb|EFF80658.1| glutamate racemase [Actinomyces odontolyticus F0309]
Length = 276
Score = 234 bits (599), Expect = 9e-60, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 98/264 (37%), Gaps = 14/264 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P+ IY+ D PYG ++ + ++
Sbjct: 3 NAPIGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGPRAIAQVRSLTLSALDELA 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF---PSMAFLGAV-PAIKQAAAYTQSGLISILST 128
+ L + NTA + R + + + + PA +Q+ T++ + ++ T
Sbjct: 63 SRGVKALVIAC-NTATAAALADARERYWIDAGIPVVEVITPAARQSVIATRNHHVGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + + V + + VE +EI+ +
Sbjct: 122 KATIQSEAYLRALAA-VPGLTVSQQACPAFVDFVEAGVT----TGEEIEAVAREYLTPLK 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----V 244
D ++L CTHYPL+ V ++ V + +S++ A L
Sbjct: 177 EAGVDTLILGCTHYPLLTGVIGRIMGERVTLVTSSEATANVTYNELVDRGLLHDPWPAGD 236
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
H +G D+ R + G
Sbjct: 237 GPQHQFLATGASDLFPRLARRFLG 260
>gi|254475982|ref|ZP_05089368.1| glutamate racemase [Ruegeria sp. R11]
gi|214030225|gb|EEB71060.1| glutamate racemase [Ruegeria sp. R11]
Length = 269
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 97/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + + + ++
Sbjct: 2 AVGIFDSGLGGLTVLDAAQRRLPDVDFLYYGDNARAPYGVRDAEDVFQLTNNAVNAMWER 61
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYT-----------QSG 121
L ++ACNTA ++ LG + +A ++
Sbjct: 62 G-CDLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTEREWGDNSPPREVETK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + S L +E+ + + + +K ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQSCGGLVDAIEDG--DMILADALVKSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ +L CTHYPL+ F+ V +A L R Q
Sbjct: 179 ALL--RKMPNPQAAILGCTHYPLMEDAFQAALGPKVKVFSQGALVAESLADYLTRH--PQ 234
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
A +G + R Q
Sbjct: 235 MLGTGGSAYLTTGDANRVSTRATQFL 260
>gi|157164289|ref|YP_001466834.1| glutamate racemase [Campylobacter concisus 13826]
gi|166231029|sp|A7ZDH6|MURI_CAMC1 RecName: Full=Glutamate racemase
gi|112801263|gb|EAT98607.1| glutamate racemase [Campylobacter concisus 13826]
Length = 262
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 9/242 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL + + E+ F+Y AD PYG + K ++ K
Sbjct: 3 IGIFDSGLGGLSVLNEALSKLSEHEFLYYADVKNVPYGQKSRDEILKFSFDAVKFLV-KN 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133
V+ACNTA ++ ELR+ S+ +G PA+K+A + +++TP T+
Sbjct: 62 GAKAVVVACNTATSVAIKELRANL-SVPIIGMEPAVKKAHDLSHDDALKTLVIATPVTVN 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
LI + ++ L++ L + E+ + + + +K ++ ++ + + D
Sbjct: 121 GAKLKELIINLNAKDKTELLALPRLVNFAEK----AEFESENVKSYLKEELVKFDLSKFD 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+ R++ P V +D ++ +R L + + + F S
Sbjct: 177 FLVLGCTHFNYFKDSLREILPPNVSIIDGNEGTIKRLISELG-LKISSVNLTPNVKFFYS 235
Query: 254 GK 255
G+
Sbjct: 236 GE 237
>gi|33865544|ref|NP_897103.1| putative aspartate and glutamate racemase:glutamate racemase
[Synechococcus sp. WH 8102]
gi|33632713|emb|CAE07525.1| Putative Aspartate and glutamate racemases:Glutamate racemase
[Synechococcus sp. WH 8102]
Length = 262
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + FDSG+GGL VL+++ +Y+ D PYGN +++ + +
Sbjct: 1 MSPRLGFFDSGVGGLTVLRRVLERHGSVACVYLGDTARVPYGNRPPAEIRRIAAEVVGWL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
D+ Q V+ACNT L +D +G + A AAA ++ + +L+TPAT
Sbjct: 61 RDQ-QVSTVVMACNTTNALARDVAEGQAGG-PVIGLIGA---AAAMVETRRVGVLATPAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ S I + + + +E DE+++ +
Sbjct: 116 VASAAYSASIEALHPGALVVEQACPAFVPLIEAG----DFSSDELRQVAKVYLEPLLAAS 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249
+ IVL CTHYPL++ + +QL P + +D + +AR+ +L PR T
Sbjct: 172 VETIVLGCTHYPLLIPLLKQLLPDAIQLVDPALGVARQLDAVLGVPRSTPGDTLELGQCR 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
++ PD R G +
Sbjct: 232 FCVTADPDGFANRATPWLGAR 252
>gi|148556725|ref|YP_001264307.1| glutamate racemase [Sphingomonas wittichii RW1]
gi|148501915|gb|ABQ70169.1| glutamate racemase [Sphingomonas wittichii RW1]
Length = 264
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 120/221 (54%), Gaps = 1/221 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
IL+FDSG+GGL VL R L+P+ ++YVAD+ GFPYG + + R+ L ++
Sbjct: 4 DRPILMFDSGVGGLSVLAPTRALLPQASYVYVADNGGFPYGIRSEAEIAARVPALLGRLV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y+P L VIACNTA T+ +R+ + +G VPAIK AA + + I +L T AT+
Sbjct: 64 ERYRPRLVVIACNTASTIALAAVRAAL-DLPIVGTVPAIKPAAERSAARAIGVLGTDATV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R+ Y +L + + C + S L E G + + ++G + G R
Sbjct: 123 RQPYVDDLSARFAADCLVLRHGSARLVELAEAKLRGEPTDPADYRAVLDGLLGQPGGDRI 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D++VLACTH+PL+ +P P+ ++D IARR L
Sbjct: 183 DMVVLACTHFPLVEAELAAAAPRPLRFVDGGPGIARRVAHL 223
>gi|227894671|ref|ZP_04012476.1| glutamate racemase [Lactobacillus ultunensis DSM 16047]
gi|227863510|gb|EEJ70931.1| glutamate racemase [Lactobacillus ultunensis DSM 16047]
Length = 268
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 11/243 (4%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
V++K+ +P I++ D+ PYGN + +L L +IACNTA
Sbjct: 18 VVKKVIKKLPNESTIFIGDNAHMPYGNRTKEDIINLTRKSVKFLL-NNDVKLVIIACNTA 76
Query: 88 FTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
D + +G + AA T++ +++++T T+ IH
Sbjct: 77 TAAAMDTIEKEI-DPQVIGVIQSGALAAARTTKNKKVAVVATSVTIASHAYEKEIHFRDP 135
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ + +++ LA VE + ++ +GK D +VL CTHYPLI
Sbjct: 136 EIKVTELAAPKLAPLVEAQE-----DHATNLRVVKESLAPLQGKDFDTLVLGCTHYPLIK 190
Query: 207 HVFRQLS-PWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALFLSGKPDIAMRRLM 264
F + V LD +D +A+ ++ R + R H + +G PD +L
Sbjct: 191 REFTEAVDDPKVTILDPADQVAQYTFNVMRRDGLFSEERHKAVHKYYTTGNPDNF-DKLA 249
Query: 265 QGF 267
+ F
Sbjct: 250 RTF 252
>gi|159903573|ref|YP_001550917.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9211]
gi|159888749|gb|ABX08963.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9211]
Length = 267
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 110/260 (42%), Gaps = 11/260 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ + IFDSG+GGL VL+ + + + +Y+AD PYG ++ + L +
Sbjct: 1 MKPLLGIFDSGVGGLTVLKNVLYRHGDLSAVYLADTARIPYGVKSPLEIQTIALGLVEWL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ VL+V ACNT +L ++ + S+ +G + ++ + I +L+TP+T
Sbjct: 61 NMQNISVLAV-ACNTTDSLAIKIVKQ-YSSVPVVGLIDSVGDLVFES---RIGVLATPST 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +I + + + +E +I +E + +
Sbjct: 116 TESRAYTKVIMASNPNAFVIEQACPAFVPLIETG----QINSNEFQIVAKNYLKPLIDSN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDDHA 249
+ I+L C+HYPL+ ++L P V +D S ++++ L+ + F +
Sbjct: 172 VEAIILGCSHYPLLKSRLQELLPKHVRLIDPSIGLSQKLDDLIGYQSFVEKSIPTFCNVR 231
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ + R+ + G+
Sbjct: 232 FCATSDSEGFASRISRWLGI 251
>gi|332297563|ref|YP_004439485.1| Glutamate racemase [Treponema brennaborense DSM 12168]
gi|332180666|gb|AEE16354.1| Glutamate racemase [Treponema brennaborense DSM 12168]
Length = 282
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 72/243 (29%), Positives = 112/243 (46%), Gaps = 7/243 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
DSG GGL ++ ++ PE +Y+AD FPYG + + + I+ K+Q
Sbjct: 6 AFLDSGTGGLPYMRYLKQQCPEARCVYLADTFHFPYGEKSVSQIIRYATDVSDLIIRKWQ 65
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P VIACNT D LR FP F+G VPA+KQAAA T++G+I +L+T T+R Y
Sbjct: 66 PKAVVIACNTMSVTALDSLRKRFPQTPFIGTVPAVKQAAACTRNGIIGLLATTRTVRDPY 125
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + C + L +E E K+ ++ + D ++
Sbjct: 126 TDALIRKFAPGCTVVRRGDGALIDFIEHRLVSAPDAER--KRAVQPAADFFKSHGADTVI 183
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRINTHQTR--VFDDHALF 251
L CTH+ I ++ V +D+ + R+A + +PR R + D F
Sbjct: 184 LGCTHFVHIADDIQEAVGRGVSVIDSRSGVVRQALKVAFTVPRAGKAAEREPLPADGTFF 243
Query: 252 LSG 254
++G
Sbjct: 244 VTG 246
>gi|33240493|ref|NP_875435.1| glutamate racemase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238021|gb|AAQ00088.1| Glutamate racemase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 267
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ + IFDSGIGG VL+ ++ + IY+AD P+G + +++ + + S
Sbjct: 1 MKLRLGIFDSGIGGFTVLKSIQERHSSFRSIYLADTQRVPFGTKQPSEIRQIALEI-SKW 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+ACNT ++ D +++ I + I IL+TP+T
Sbjct: 60 LCRQNINAVVVACNTTNSVALDVVKNNVEVP----VFDLIGSTSELIHESRIGILATPST 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ S I S + +E +I E++ I +
Sbjct: 116 VASKAYSKEILSSKPFSFVLEEGCPEFVPMIERG----QINSSEVRGAIVNHLEPLIKEN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQ-TRVFDDHA 249
+ IVL C+H+PL+ +F++L P + +D S ++A++ L+ P +N R D
Sbjct: 172 VEAIVLGCSHFPLLKPIFKELMPSNIRLIDPSLNLAKKLDTLITPSVNEVDLARKPIDIH 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
++ P + G++
Sbjct: 232 FCVTSDPSQFSDKASHWLGIR 252
>gi|149204811|ref|ZP_01881774.1| Glutamate racemase [Roseovarius sp. TM1035]
gi|149141780|gb|EDM29833.1| Glutamate racemase [Roseovarius sp. TM1035]
Length = 270
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 101/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V + +PE +Y+ D+ PYG + + +
Sbjct: 2 AVGIFDSGLGGLTVWDAVSKRLPEVPLVYLGDNAHAPYGVRDADDIYDLTTSSVERLFAA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+R + + + + +E+ + + E ++ ++
Sbjct: 121 NVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ + VL CTHYPL+ VF+ V + +A L R +
Sbjct: 179 A--LKRKMPHPEAAVLGCTHYPLVQEVFQDALGPDVAVYSQPNLVASSLADYLGRH-PDK 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ A +G P R Q
Sbjct: 236 IGAGAEAAFLTTGDPKRVSSRATQFL 261
>gi|330994654|ref|ZP_08318577.1| Glutamate racemase [Gluconacetobacter sp. SXCC-1]
gi|329758295|gb|EGG74816.1| Glutamate racemase [Gluconacetobacter sp. SXCC-1]
Length = 279
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 88/254 (34%), Positives = 136/254 (53%), Gaps = 4/254 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL FDSGIGGL V+ ++R L+P Y+AD +PYG D L+ R++ L + +
Sbjct: 4 ILAFDSGIGGLGVVAQLRALLPGVPIDYLADTAVYPYGEQPDALLRHRIVTLLGQAIARL 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P + VIACNTA TL D LR+T+ + F+G VP IK AA +T++G I +L+T AT+RR
Sbjct: 64 RPSVVVIACNTASTLALDSLRATY-GIPFVGCVPPIKWAADHTRTGTIGLLATRATVRRP 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y +L + +C + + LA E G+ ++ E++G F + G DV+
Sbjct: 123 YLQDLHARFAPRCTLLAHGARGLADMAERAFRGLPPDRTQLAIELDGLFGQPGGAAIDVV 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALFLSG 254
+ CTHY ++ R+ P V WLD + ++AR+A +L + + F +
Sbjct: 183 GIGCTHYTFLLDALRESGPAGVTWLDPAPAVARQAARVLTEQAPAIPCATGGERVCFTAL 242
Query: 255 KPDIAMRRLMQGFG 268
PD L+ G G
Sbjct: 243 PPDFPA--LLPGLG 254
>gi|124023594|ref|YP_001017901.1| aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9303]
gi|123963880|gb|ABM78636.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9303]
Length = 268
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 10/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ + +FDSG+GGL VL+++ + +Y+ D PYGN H ++ + +
Sbjct: 1 MKPRLGLFDSGLGGLTVLRRVLERHGQVSCLYLGDTARVPYGNRMPHEIRVIAKEVVQWL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
D+ Q V+ACNT L D + + V I+ AA + +L+TPA
Sbjct: 61 RDQ-QVTAVVMACNTTNALASDVAEAVAGGIPV---VRLIEAAANMLSEARVGVLATPAA 116
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I + +E ++ +E+ + +
Sbjct: 117 AASGAYGKQIEISRPGTMVIEQGCPAFVPLIETG----QLSSEELYQAAREYLNPLLAAQ 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249
+ +VL CTHYPL+ + RQ+ P V +D + +AR LL P I +
Sbjct: 173 VEAVVLGCTHYPLLEPILRQILPQDVRLIDPAIGVARELDVLLGSPTIPLGTSLSLTSTR 232
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ P+ R G
Sbjct: 233 FCVTANPEGFATRATPWLG 251
>gi|99080963|ref|YP_613117.1| glutamate racemase [Ruegeria sp. TM1040]
gi|123077676|sp|Q1GHL1|MURI_SILST RecName: Full=Glutamate racemase
gi|99037243|gb|ABF63855.1| glutamate racemase [Ruegeria sp. TM1040]
Length = 269
Score = 232 bits (594), Expect = 3e-59, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 100/266 (37%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ D+
Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVDFLYYGDNSHAPYGVRDAEDIYELTHKAVHDMWDR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ LG + +A Q G
Sbjct: 62 G-CNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E +K ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVKSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ R + +L CTHYPL+ VF++ V +A L R
Sbjct: 179 ALL--RKMPRPEAAILGCTHYPLMEDVFQKALGPDVQVFSQGRLVADSLAHYLERRPEMI 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G + R Q
Sbjct: 237 G--GGNAGYVTTGNANRVSSRATQFL 260
>gi|221639366|ref|YP_002525628.1| glutamate racemase [Rhodobacter sphaeroides KD131]
gi|221160147|gb|ACM01127.1| Glutamate racemase [Rhodobacter sphaeroides KD131]
Length = 266
Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 19/263 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL ++ +PE F+Y D+ PYG + + + +
Sbjct: 1 MFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCAATERLWAEG-C 59
Query: 78 VLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG-----------LIS 124
L ++ACNTA ++ T+ LG + +A Q G ++
Sbjct: 60 DLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVKHVA 119
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 120 LFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVEA-- 175
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+++ +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 176 LKRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFAG-A 234
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
+ +G P + Q
Sbjct: 235 GTESKFLTTGDPRSVSNKATQFL 257
>gi|261749317|ref|YP_003257002.1| glutamate racemase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
gi|261497409|gb|ACX83859.1| glutamate racemase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
Length = 271
Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 103/251 (41%), Gaps = 12/251 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSGIGGL++ ++++ MP IY D PYGN ++ M + S + +
Sbjct: 7 SPIGIFDSGIGGLLIAKEIKNYMPNECIIYFGDTKNMPYGNKSKEFIRNHSMKIASFLYE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131
K VIACN+ + D ++ F + P +K + S I I++TPAT
Sbjct: 67 KK-CKAIVIACNSIVSNALDVIQKNFLKKILIFNVIEPIVKNKVLIS-SKRIGIMATPAT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + I Y I +S+ +LA+ +E KI ++ + +
Sbjct: 125 IRSNFYQKNIKRYCPHLDIVQISTPLLATIIENGFEKKKI------NYLKNYLNHFKSIK 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHA 249
D ++LACTHY + V +D + + + L N + ++
Sbjct: 179 IDTLLLACTHYLFLKKEIDNFFHGKVRLIDIQKIVVQEIQKKLYENNLLCLHSTWNNNPI 238
Query: 250 LFLSGKPDIAM 260
+ S
Sbjct: 239 FYTSSSISPFF 249
>gi|33862666|ref|NP_894226.1| putative aspartate and glutamate racemase:glutamate racemase
[Prochlorococcus marinus str. MIT 9313]
gi|33634582|emb|CAE20568.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9313]
Length = 268
Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 10/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ + +FDSG+GGL VL+++ + +Y+ D PYGN H ++ + +
Sbjct: 1 MKPRLGLFDSGVGGLTVLRRVLERHGQVPCLYLGDTARVPYGNRMPHEIRVIAKEVVQWL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
D+ Q V+ACNT L D + + V I+ AA + +L+TPA
Sbjct: 61 RDQ-QVTAVVMACNTTNALASDVAEAVAGRIPV---VRLIEAAANMLSEERVGVLATPAA 116
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I + +E ++ +E+ + +
Sbjct: 117 AASGAYGKQIEISRPGTMVIEQGCPAFVPLIETG----QLSSEELYQAAREYLNPLLAAQ 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249
+ +VL CTHYPL+ + RQ+ P V +D + +AR LL P I +
Sbjct: 173 VEAVVLGCTHYPLLEPILRQILPQDVRLIDPAIGVARELDVLLGSPTIPLGTSLSLTSTR 232
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ P+ R G
Sbjct: 233 FCVTANPEGFATRATPWLG 251
>gi|305432470|ref|ZP_07401632.1| glutamate racemase [Campylobacter coli JV20]
gi|304444509|gb|EFM37160.1| glutamate racemase [Campylobacter coli JV20]
Length = 253
Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats.
Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 15/251 (5%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ ++ I +FDSG+GGL VL+ + IY D PYG + + K +
Sbjct: 1 MLEDIKMKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIVKFCLEA 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLIS 124
D K+ + +IACNTA D LR G + A +A A ++ I
Sbjct: 61 L-DFFSKFNIDMLIIACNTASAYALDALRLKA-DFPIYGVIDAGVEATKKALLDKNKKIL 118
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+++T AT++ N + ++ +++ + VEE ++ + ++ +G
Sbjct: 119 VIATKATIQSKEYQNRLQKQGFN-NVDALATGLFVPMVEEGIFEGELLQSAMRYYFKGI- 176
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D ++LACTH+PL+ + + + D+I + R
Sbjct: 177 -----ETPDALILACTHFPLLANSLSVYFGSKTKLIHSGDAIVEFLK---QRQKLLLKEE 228
Query: 245 FDDHALFLSGK 255
+ S
Sbjct: 229 KAKLHFYASSD 239
>gi|254462580|ref|ZP_05075996.1| glutamate racemase [Rhodobacterales bacterium HTCC2083]
gi|206679169|gb|EDZ43656.1| glutamate racemase [Rhodobacteraceae bacterium HTCC2083]
Length = 270
Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 97/264 (36%), Gaps = 19/264 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL R +P+ F+Y AD PYG + + +R +
Sbjct: 2 AVGVFDSGLGGLTVLDAARARLPDVPFVYYADSAHAPYGVRDSEDIYQRTKKAVGYLWA- 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ LG + +A + G
Sbjct: 61 NGCDLVILACNTASAAALRRMQEAGVPKGKRVLGVFVPLIEALTEREWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++I +TPAT+ + + + + +E+ + + E ++ +E
Sbjct: 121 EVAIFATPATIASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ +L CTHYPL+ F+ V + +A L R
Sbjct: 179 A--LKRKMPEPQAAILGCTHYPLMETHFQAALGEDVKVYSQAGLVAESLADYLERRPDF- 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQ 265
H F SG P Q
Sbjct: 236 IGSGKMHRYFTSGDPARVSDHATQ 259
>gi|315638310|ref|ZP_07893491.1| glutamate racemase [Campylobacter upsaliensis JV21]
gi|315481657|gb|EFU72280.1| glutamate racemase [Campylobacter upsaliensis JV21]
Length = 248
Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 93/258 (36%), Gaps = 15/258 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +
Sbjct: 3 IGVFDSGVGGLSVLKSLYEANLFEEIIYYGDTARVPYGVKDKETIIKFCLEAL-EFFKSF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132
+ + +IACNTA + LR+ G + A +A + I +++T AT+
Sbjct: 62 KIDMLIIACNTASAYALEALRARA-DFPIYGVIEAGVRATCKNLEDKDKEILVIATKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + +++ + VEE + +K F K+ K
Sbjct: 121 NSRQYQINLEKE-GFTRVKALATGLFVPMVEEGIFEGEF----LKSAFLHYF--KDVKSP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++LACTH+PL+ + + + ++I R + F
Sbjct: 174 DALILACTHFPLLSKALSEFFGSKTRLIHSGEAIVEFLR---ENSHFKLLDKRAKLRFFA 230
Query: 253 SGKPDIAMRRLMQGFGLK 270
S + L
Sbjct: 231 SSDIKSLEKTAKIWLNLS 248
>gi|57241965|ref|ZP_00369905.1| glutamate racemase [Campylobacter upsaliensis RM3195]
gi|57017157|gb|EAL53938.1| glutamate racemase [Campylobacter upsaliensis RM3195]
Length = 248
Score = 231 bits (591), Expect = 6e-59, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 15/258 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL+ + IY D PYG + + K + + +
Sbjct: 3 VGVFDSGVGGLSVLKSLYEANLFEEIIYYGDTARVPYGVKDKETIIKFCLEAL-EFFKSF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA---AYTQSGLISILSTPATL 132
+ + +IACNTA + LR+ G + A +A + I +++T AT+
Sbjct: 62 KIDMLIIACNTASAYALEALRARA-DFPIYGVIEAGVRATCKNLQDKDKEILVIATKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + +++ + VEE + +K F K+ K
Sbjct: 121 NSKQYQISLKKE-GFTRVKALATGLFVPMVEEGIFEGEF----LKSAFLHYF--KDVKSP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++LACTH+PL+ + + + ++I R + F
Sbjct: 174 DALILACTHFPLLSKALSEFFGSKTRLIHSGEAIVEFLR---ENSHFKLLDKRAKLRFFA 230
Query: 253 SGKPDIAMRRLMQGFGLK 270
S + L
Sbjct: 231 SSDIKTLEKTAKIWLNLS 248
>gi|57168788|ref|ZP_00367919.1| glutamate racemase [Campylobacter coli RM2228]
gi|57019835|gb|EAL56518.1| glutamate racemase [Campylobacter coli RM2228]
Length = 247
Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 15/243 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + D K+
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIVKFCLEAL-DFFSKF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132
+ +IACNTA D LR G + A +A A ++ I +++T AT+
Sbjct: 62 NIDMLIIACNTASAYALDALRLKA-DFPIYGVIDAGVEATKKALLDKNKKILVIATKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + VEE ++ + ++ +G +
Sbjct: 121 QSKEYQNRLQKQGFN-NVDALATGLFVPMVEEGIFEGELLQSAMRYYFKGI------ETP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++LACTH+PL+ + + + D+I + R +
Sbjct: 174 DALILACTHFPLLANSLSVYFGSKTKLIHSGDAIVEFLK---QRQKLLLKEEKAKLHFYA 230
Query: 253 SGK 255
S
Sbjct: 231 SSD 233
>gi|222823123|ref|YP_002574696.1| glutamate racemase [Campylobacter lari RM2100]
gi|222538344|gb|ACM63445.1| glutamate racemase [Campylobacter lari RM2100]
Length = 246
Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats.
Identities = 49/254 (19%), Positives = 95/254 (37%), Gaps = 14/254 (5%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+ + +IY D PYG + + K + + + +
Sbjct: 4 GVFDSGVGGLSVLKSLLQAKLFKEYIYYGDTARVPYGVKDKETIIKFSLEAL-EFFKEKK 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATLR 133
+ +IACNT + L++ S LG + A A + ++ I +++T AT+
Sbjct: 63 VDMLIIACNTVSAHALEILKANA-SFPVLGVIEAGVLAVKNSLEDKNSNILVIATQATVD 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + ++ + VEE K + K +
Sbjct: 122 SHAYKRALIKE-GFLKVEEKATGLFVPMVEEGIFQGDF-----LKAAFEYYFNKLKFHPN 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++LACTH+PLI H + + + ++IA + + N + + + S
Sbjct: 176 ALILACTHFPLIAHSLSEYFGKNTKLIHSGEAIALQLQ---QEFNLTSIQEEANVEFYAS 232
Query: 254 GKPDIAMRRLMQGF 267
+ +
Sbjct: 233 SDVEKLKKIANLWL 246
>gi|86149468|ref|ZP_01067699.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596590|ref|ZP_01099827.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 84-25]
gi|218563241|ref|YP_002345021.1| glutamate racemase [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|11386947|sp|Q9PM24|MURI_CAMJE RecName: Full=Glutamate racemase
gi|85840250|gb|EAQ57508.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88191431|gb|EAQ95403.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360948|emb|CAL35749.1| glutamate racemase [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|284926846|gb|ADC29198.1| glutamate racemase [Campylobacter jejuni subsp. jejuni IA3902]
gi|315927597|gb|EFV06928.1| glutamate racemase [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315929474|gb|EFV08670.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 305]
Length = 250
Score = 230 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 104/257 (40%), Gaps = 15/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + D +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-DFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132
Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT+
Sbjct: 62 QIDMLIIACNTASAYALDALRAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + S +I+ +++ + VEE + D ++ +E F K
Sbjct: 121 KSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFYA 230
Query: 253 SGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 231 SSDVESLKNTAKIWLNL 247
>gi|148925791|ref|ZP_01809479.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8486]
gi|145845801|gb|EDK22892.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8486]
Length = 247
Score = 230 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 104/257 (40%), Gaps = 15/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + D +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-DFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132
Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT+
Sbjct: 62 QIDMLIIACNTASAYALDALRAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + S +I+ +++ + VEE + D ++ +E F K
Sbjct: 121 KSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFYA 230
Query: 253 SGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 231 SSDVESLKNTAKIWLNL 247
>gi|299137116|ref|ZP_07030299.1| glutamate racemase [Acidobacterium sp. MP5ACTX8]
gi|298601631|gb|EFI57786.1| glutamate racemase [Acidobacterium sp. MP5ACTX8]
Length = 267
Score = 230 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 11/254 (4%)
Query: 12 LQNSI-LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + I +FDSG GGL VL+ + L+P H+IY+ D PYG+ + + +
Sbjct: 1 MSSPIIGVFDSGFGGLTVLRALLPLVPGAHYIYLGDTARLPYGSKSQTTIARYAVESA-R 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L++ L VIACNTA L E+R+ P ++ A S + +L+T A
Sbjct: 60 FLEERGSDLLVIACNTATALALPEIRAAVSVPVVGVIEPVVRAANLQHPSAEVLVLATTA 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ L H + +L VEE + D ++ +E K
Sbjct: 120 TVQSHAY--LQHCEALGLRATEKACPLLVPLVEEGWIDHPVTRDVLRIYLEEALATCSPK 177
Query: 191 RTDVIVLACTHYPLIVHVFR---QLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
++L CTHYPL+ + + +D++ + A P +T +
Sbjct: 178 ---AVLLGCTHYPLLAPLVETTLRELGSQAVVIDSAQATAAEVETHFP-TSTPSSSDAAT 233
Query: 248 HALFLSGKPDIAMR 261
F + + R
Sbjct: 234 FECFATDSVEKFQR 247
>gi|295692284|ref|YP_003600894.1| glutamate racemase [Lactobacillus crispatus ST1]
gi|295030390|emb|CBL49869.1| Glutamate racemase [Lactobacillus crispatus ST1]
Length = 268
Score = 230 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 11/243 (4%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
V +K+ +P +++ D+ PYG+ + + + +LDK L + ACNTA
Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRTKEEIIELVRKSVQFLLDK-NVKLIIFACNTA 76
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
+ +++ +G + + AA T++ ++++ST AT + I
Sbjct: 77 TAMAMSTIQAEI-DPQIIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIRFRDP 135
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ + +++ LA VE + K ++ +GK D +++ CTHYPLI
Sbjct: 136 EIQVTELAAPKLAPLVEAQK-----DHETNLKVVKESLTPLQGKDFDTLIMGCTHYPLIQ 190
Query: 207 HVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLM 264
F++ V LD +D +A+ ++ R H + +G P + RL
Sbjct: 191 KEFKEAINDKNVTILDPADQVAQYTFNVMRRDGLFSDGNEKVSHEYYTTGDP-TSFDRLA 249
Query: 265 QGF 267
+ F
Sbjct: 250 RTF 252
>gi|157415872|ref|YP_001483128.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81116]
gi|157386836|gb|ABV53151.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81116]
gi|307748509|gb|ADN91779.1| Glutamate racemase [Campylobacter jejuni subsp. jejuni M1]
gi|315931379|gb|EFV10348.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 327]
Length = 247
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 15/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132
Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT+
Sbjct: 62 QIDMLIIACNTASAYALDALRAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + S +I+ +++ + VEE + D ++ +E F K
Sbjct: 121 KSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFYA 230
Query: 253 SGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 231 SSDVESLKNTAKIWLNL 247
>gi|259419026|ref|ZP_05742943.1| glutamate racemase [Silicibacter sp. TrichCH4B]
gi|259345248|gb|EEW57102.1| glutamate racemase [Silicibacter sp. TrichCH4B]
Length = 269
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+ D+
Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVDFLYYGDNSHAPYGVRDAEDIYQLTHKAVHDMWDR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ LG + +A Q G
Sbjct: 62 G-CNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E +K ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVKSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ R + +L CTHYPL+ +F++ V +A L R
Sbjct: 179 ALL--RKMPRPEAAILGCTHYPLMEDIFQKALGPDVQVFSQGRLVADSLAHYLERRPDMI 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G R Q
Sbjct: 237 GGGAAG--YLTTGNAGRVSSRATQFL 260
>gi|57238663|ref|YP_179794.1| glutamate racemase [Campylobacter jejuni RM1221]
gi|86152895|ref|ZP_01071100.1| glutamate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|57167467|gb|AAW36246.1| glutamate racemase [Campylobacter jejuni RM1221]
gi|85843780|gb|EAQ60990.1| glutamate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|315059102|gb|ADT73431.1| Glutamate racemase [Campylobacter jejuni subsp. jejuni S3]
Length = 247
Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 17/258 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131
Q + +IACNTA D LR + FP + G IK A + ++ I +++T AT
Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIK--ALHDKNKEILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S +I+ +++ + VEE + D ++ +E F K
Sbjct: 120 IKSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITT 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 173 PDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 230 ASSDVESLKNTAKIWLNL 247
>gi|282856714|ref|ZP_06265980.1| glutamate racemase [Pyramidobacter piscolens W5455]
gi|282585479|gb|EFB90781.1| glutamate racemase [Pyramidobacter piscolens W5455]
Length = 267
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ + +FDSG+GG V+++++ ++P +Y D PYGN + + + +
Sbjct: 5 SPVGVFDSGVGGFSVVKEIQKVLPGEDVLYYGDSANMPYGNRSGEEILHLTRQILAFLER 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ +V ACNT +L D R +P + A + A + + ++ T T R
Sbjct: 65 RGVKAAAV-ACNTISSL-IDRYRDDYP-FKIFSVIEAGAASVATLDADCVGVIGTVFTAR 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
LI++ + ++ LA ++ + + E++ +E + +
Sbjct: 122 SGAYHRLINAVRPEMKVYAQGCPNLARLIDGGDLRPESIDPELRAAVEPLLAQAPIRH-- 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYPL+ +L P + +D + A + L L S
Sbjct: 180 -LILGCTHYPLVSGYLNRLYP-QLTLIDPAHEQALAVKRFLESQGLLNDAGSGSLELNTS 237
Query: 254 GKPDIAMRRLMQGFGLK 270
G + FGLK
Sbjct: 238 GDA-AQYAEAARRFGLK 253
>gi|283957038|ref|ZP_06374510.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 1336]
gi|283791539|gb|EFC30336.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 1336]
Length = 247
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 15/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132
Q + +IACNTA D L++ G + A +A A + ++ I +++T AT+
Sbjct: 62 QIDMLIIACNTASAYALDALKAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + +I+ +++ + VEE + D ++ +E F K
Sbjct: 121 KSEEYQKRLL-FQGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFYA 230
Query: 253 SGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 231 SSDVESLKNTAKIWLNL 247
>gi|238855622|ref|ZP_04645923.1| glutamate racemase [Lactobacillus jensenii 269-3]
gi|260665318|ref|ZP_05866166.1| glutamate racemase [Lactobacillus jensenii SJ-7A-US]
gi|282933004|ref|ZP_06338398.1| glutamate racemase [Lactobacillus jensenii 208-1]
gi|238831766|gb|EEQ24102.1| glutamate racemase [Lactobacillus jensenii 269-3]
gi|260560822|gb|EEX26798.1| glutamate racemase [Lactobacillus jensenii SJ-7A-US]
gi|281302858|gb|EFA95066.1| glutamate racemase [Lactobacillus jensenii 208-1]
Length = 266
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 98/266 (36%), Gaps = 17/266 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P + VL+K+ +P +++ D PYG+ + +
Sbjct: 1 MDNRPIGLLDSGLGGL--------TVLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ +L K + + ACNTA + ++ + +G + AA T++
Sbjct: 53 LTRRSVNFLLSK-NVKVIIFACNTATAAAMEVIQKEI-TPQIIGVIQSGSLAAARTTKNN 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++++ T T+ S I + +++ LA VE D ++ ++
Sbjct: 111 KVAVIGTHVTIESHAYSREIKFRNPDIEVTELATPQLAPLVEAQ-RDYAYNIDVVRDSLD 169
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ K D +VL CTHYP+I ++ + +D +D +A+ +L R
Sbjct: 170 S----LKEKEFDTMVLGCTHYPIIEKEISKVVGSTIKLVDPADQVAQYTENVLKRDGMLA 225
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +G +
Sbjct: 226 GKK-GKREYYTTGDCQKFTEIARKWL 250
>gi|152996178|ref|YP_001341013.1| glutamate racemase [Marinomonas sp. MWYL1]
gi|189030362|sp|A6VX99|MURI_MARMS RecName: Full=Glutamate racemase
gi|150837102|gb|ABR71078.1| glutamate racemase [Marinomonas sp. MWYL1]
Length = 275
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 6/221 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG GGL +L + P +Y+ADD PYG+ L+ RL+ +
Sbjct: 3 VGVMDSGAGGLTILNAIHQKHPYLDLVYLADDAFAPYGSKSITQLQDRLVK-VGRFFENE 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA D LR++ S+ +G PA+K A ++ +++L+TP T
Sbjct: 62 KVCAIVVACNTATVAAIDALRAS-TSLPIIGVEPAVKPAFRLSKKRRVAVLATPVTAESP 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ LI + H+ ++SS+ LA ++ + E+++K+ IE E + D +
Sbjct: 121 RLNQLIDLWKEDSHVSIMSSLTLAFDIDAW----PETEEKVKQTIEQLSQEMLAQNIDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
VLACTHYPL+ H+F Q+ + ++ S+ + + L
Sbjct: 177 VLACTHYPLVKHLFEQILGDECEIIEPSEGVTAQLIRRLTE 217
>gi|86152334|ref|ZP_01070545.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 260.94]
gi|85840823|gb|EAQ58074.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 260.94]
Length = 247
Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 17/258 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131
Q + +IACNTA D LR + FP + G IK A + ++ I +++T AT
Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIK--ALHDKNKEILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S +I+ +++ + VEE + D ++ +E F K
Sbjct: 120 IKSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITT 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 173 PDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 230 ASSDVESLKNTAKIWLNL 247
>gi|209542243|ref|YP_002274472.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5]
gi|209529920|gb|ACI49857.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5]
Length = 272
Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 1/228 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL FDSGIGG +++ +R +P Y+AD+ +PYG D L +R++ L
Sbjct: 1 MARRILAFDSGIGGFGIVRALRTRLPGVSLDYLADNAVYPYGEQPDTDLIRRIVALIGQA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+D P L VIACNTA TL LR + ++ F+G VP IK AA +++ I +L+T AT
Sbjct: 61 IDALDPDLVVIACNTASTLALPALRERY-ALPFVGCVPPIKWAAELSRTRTIGLLATRAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR Y +L Y C + + LA E G I D I +E++ F + G
Sbjct: 120 VRRPYLGDLQRRYAPDCTLLAHGARGLADLAECAFRGHAIATDAIDRELDALFGQPGGAA 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
DV+ + CTHY ++ R SP WLD ++++AR+A +L + T
Sbjct: 180 IDVVGIGCTHYTFLMDRLRAASPPGTIWLDPAEAVARQAATVLGPLGT 227
>gi|94497599|ref|ZP_01304168.1| Glutamate racemase [Sphingomonas sp. SKA58]
gi|94423016|gb|EAT08048.1| Glutamate racemase [Sphingomonas sp. SKA58]
Length = 279
Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 79/259 (30%), Positives = 126/259 (48%), Gaps = 3/259 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
IL FDSG+GGL +L +R ++P +Y AD GFPYG + + R+ L +
Sbjct: 17 ADAPILFFDSGVGGLSILAPVRDMLPTASIVYAADSAGFPYGTKSEAEIAARVPALLGRL 76
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y+P L+VIACNTA T+ +R+ + +G VPAIK AA +++ + +L T AT
Sbjct: 77 VERYRPRLAVIACNTASTIALQHVRAAL-DIPVVGTVPAIKPAALLSKNRIFGVLGTDAT 135
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y L + + C + S L E G + + + G + G+R
Sbjct: 136 VRQPYVDRLAAEHGADCIVLRHGSAALVQLAEAKLRGEPLDPRVARAALAGLTTQPGGQR 195
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D++VLACTH+PL+ +P + ++ D IARR L T A+F
Sbjct: 196 MDMVVLACTHFPLVEAELAAAAPHSLGFVHGGDGIARRI-AFLTEGQTWPAEPTPGTAVF 254
Query: 252 LSGK-PDIAMRRLMQGFGL 269
+R + +GL
Sbjct: 255 TRLDAQQERLRPALARYGL 273
>gi|153952642|ref|YP_001398928.1| glutamate racemase [Campylobacter jejuni subsp. doylei 269.97]
gi|152940088|gb|ABS44829.1| glutamate racemase [Campylobacter jejuni subsp. doylei 269.97]
Length = 247
Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 15/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132
Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT+
Sbjct: 62 QINMLIIACNTASAYALDVLRAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + Y +I+ +++ + VEE + D ++ +E F K
Sbjct: 121 KSEEYQKRLL-YQGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFYA 230
Query: 253 SGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 231 SSDVESLKNTAKIWLNL 247
>gi|255659131|ref|ZP_05404540.1| glutamate racemase [Mitsuokella multacida DSM 20544]
gi|260848578|gb|EEX68585.1| glutamate racemase [Mitsuokella multacida DSM 20544]
Length = 260
Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 7/240 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGGL VL ++P+ F++ AD+ PYG +K + F ++
Sbjct: 3 IAFFDSGIGGLSVLHHAMRVLPKEQFVFYADEDNVPYGVKTTDEVKGFVQQAFDFLV-GC 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ E+R + + +G PA K+A + + +TP T+
Sbjct: 62 DVKAIVVACNTATSVAVREMRHRY-DIPIIGMEPAAKKALDLDGEHRVLVAATPITVHGK 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI + + L+ L E + + + + + +
Sbjct: 121 KMQILIDRFDKDHLVDLLPLPRLVEFAER----EEFRSEAVHAYLAQELGRFHLADYSAL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ R++ P + ++D ++ R L + + + + SG+
Sbjct: 177 VLGCTHFNYFKDTMREIMPENMHFVDGNEGTVRELIRQLDARHELED-LPQTVDYYYSGR 235
>gi|94676801|ref|YP_588621.1| glutamate racemase [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|94219951|gb|ABF14110.1| glutamate racemase [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 274
Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats.
Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 8/267 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K +ILI DSG+GGL + +++ ++P +++YV D+ FPYG + RL+ +
Sbjct: 4 KKNKLPTILIVDSGVGGLSIFYQIKKIIPNANYLYVFDNEAFPYGEKTKRFIINRLIIII 63
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + + L +IACNTA L LR F +G +PAIK A T S +I +L+T
Sbjct: 64 NAVRKLHYVDLIIIACNTASILALKALRQYF-FYPIIGVLPAIKLATTITNSKVIGLLAT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ Y +N I++Y I + + L + VE G KI +++ + +
Sbjct: 123 TATINSKYITNSINNYKKSYKIISLKAPELVNLVEAKLHGEKISLLSLREILFPWLKTSQ 182
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INTHQTRVFD 246
+ D I+L CTH+PLI + + P + +D ++A R LL + IN++Q+ +F
Sbjct: 183 TYKLDTIILGCTHFPLIYEELKLILPTSIKIIDAHQTVANRV-FLLSKKFINSNQSSIFT 241
Query: 247 DHALFL---SGKPDIAMRRLMQGFGLK 270
+ + + K + L+Q +G
Sbjct: 242 INKTYCPIINNKIKLLKPYLLQ-YGFN 267
>gi|253582420|ref|ZP_04859643.1| glutamate racemase [Fusobacterium varium ATCC 27725]
gi|251835959|gb|EES64497.1| glutamate racemase [Fusobacterium varium ATCC 27725]
Length = 263
Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 108/259 (41%), Gaps = 11/259 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++SI IFDSGIGGL +L+K+R L+P + IY D PY ++ +
Sbjct: 2 NKESSIGIFDSGIGGLTILKKIRELLPRENIIYYGDWKNNPYSEKSKEDIQNLSAKIMDF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTP 129
++ + VI C+ D L+S + ++ +G + +K A ++ I+++ +
Sbjct: 62 LI-RNNCKAVVIGCSIFSAASLDFLKSQY-NIPIIGMIEGGVKSAILESKQKKIAVMGSA 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I ++ +S L + +E+ + EI ++ +
Sbjct: 120 FTIKSNVYEESIKEIDPNITVYQISCKALCAMLEKGWENYPD-----RMEILESYLCQIP 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDH 248
D ++L THYP I++ R+ +D+S A +L + + +
Sbjct: 175 DTADTLILGGTHYPFILNDIRKFF--SKKIVDSSVESAIELFRVLGQEDLLREGYKKGRI 232
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+++G ++ Q F
Sbjct: 233 EFYINGDKEVFKNVAEQLF 251
>gi|307298986|ref|ZP_07578788.1| glutamate racemase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306915411|gb|EFN45796.1| glutamate racemase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 273
Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats.
Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 11/255 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPE-YHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL VL+++ +PE F Y AD PYG+ L++ + +F D+
Sbjct: 7 IGVFDSGIGGLTVLKRLVETLPEGVSFHYFADTARVPYGSKPVETLRRYVREIF-DLFAH 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLR 133
V ACNT+ +++ ++ F P +++ + ++I++T T++
Sbjct: 66 LNVDAIVTACNTSDSILTQSDKAELGVPYFSIIDPTVRRIGESAPGNSTVAIIATENTVK 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
++ + Y S I + + +EE +I + ++ + D
Sbjct: 126 KSLYLRKLFRYESFSKIVQKACPLFVPLIEEGIWEGEI----VDSIVKYYLNDFAEIEPD 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYP I + + P +D S+ I R ++ + V ++S
Sbjct: 182 FMILGCTHYPFIKNSIERFLPSKTKVVDPSEYIVRDVADWATILSPEPSTVD----YYVS 237
Query: 254 GKPDIAMRRLMQGFG 268
G I L + G
Sbjct: 238 GNTRIFQDILKRYLG 252
>gi|295696096|ref|YP_003589334.1| glutamate racemase [Bacillus tusciae DSM 2912]
gi|295411698|gb|ADG06190.1| glutamate racemase [Bacillus tusciae DSM 2912]
Length = 285
Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 8/240 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I ++DSG+GGL VL MPE+ ++Y D + PYG+ ++ + ++ +
Sbjct: 3 IGMYDSGVGGLTVLAAFVRHMPEHDYVYFGDTLHAPYGDRTAEEVRALSLAAVKQLVAR- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNT+ ++ D L + +P + L + A+ A + I++L+T T+
Sbjct: 62 NIDLLVVACNTSASVAVDALVNHYPDLPVLTLLDAVGPAVRHLPGRKIALLATRRTVEAG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+HS + V++ L +E + ++ DV+
Sbjct: 122 VFEARLHSARPDAAVRSVAAPALVPLIERGVKDPAVYGPF----LDSYLKPLATWGADVL 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYPLI + P +D + +AR R + L SG
Sbjct: 178 VLGCTHYPLIADQIQSRVP-HTLLIDPATHLARHVAE--KRDAFPASSSAGSVTLLASGD 234
>gi|237751612|ref|ZP_04582092.1| glutamate racemase [Helicobacter bilis ATCC 43879]
gi|229372978|gb|EEO23369.1| glutamate racemase [Helicobacter bilis ATCC 43879]
Length = 258
Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 100/221 (45%), Gaps = 12/221 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N+I IFDSG GGL VL+ + + H +Y D PYGN + +++ + +
Sbjct: 5 NNIGIFDSGAGGLTVLKSLIEEVGFNHIVYYGDTARVPYGNKDTETIRRFSLEAL-EFFS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPA 130
+ L V+ACNTA ++ + +G + + A + I +++T A
Sbjct: 64 NFGLDLLVVACNTASAHALHAMQE-CSKIPIIGVIESGIAALTQQHIAKDKHILVIATEA 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + + +I +++ + S VEE+ ++ + ++
Sbjct: 123 TIKSDNYAKSLRNLGY-TNITSLATNLFVSLVEEHVFSGEVVDSVLRHYFPPTLKP---- 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
DV++L CTH+PL++ ++ V ++ + ++IA R
Sbjct: 178 --DVVILGCTHFPLLLLPMQKYFGSDVKFIHSGEAIACYVR 216
>gi|227877591|ref|ZP_03995646.1| glutamate racemase [Lactobacillus crispatus JV-V01]
gi|256844565|ref|ZP_05550051.1| glutamate racemase [Lactobacillus crispatus 125-2-CHN]
gi|256849046|ref|ZP_05554479.1| glutamate racemase [Lactobacillus crispatus MV-1A-US]
gi|262047528|ref|ZP_06020483.1| glutamate racemase [Lactobacillus crispatus MV-3A-US]
gi|293381594|ref|ZP_06627581.1| glutamate racemase [Lactobacillus crispatus 214-1]
gi|227862815|gb|EEJ70279.1| glutamate racemase [Lactobacillus crispatus JV-V01]
gi|256613643|gb|EEU18846.1| glutamate racemase [Lactobacillus crispatus 125-2-CHN]
gi|256713822|gb|EEU28810.1| glutamate racemase [Lactobacillus crispatus MV-1A-US]
gi|260572104|gb|EEX28669.1| glutamate racemase [Lactobacillus crispatus MV-3A-US]
gi|290921864|gb|EFD98879.1| glutamate racemase [Lactobacillus crispatus 214-1]
Length = 268
Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 11/243 (4%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
V +K+ +P +++ D+ PYG+ + + + +L+K L + ACNTA
Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRTKEEIIELVRKSVQFLLEK-NVKLIIFACNTA 76
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
+ +++ +G + + AA T++ ++++ST AT + I
Sbjct: 77 TAMAMSTIQAEI-DPQIIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIRFRDP 135
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ + +++ LA VE + K ++ +GK D +++ CTHYPLI
Sbjct: 136 EIQVTELAAPKLAPLVEAQK-----DHETNLKVVKESLTPLQGKDFDTLIMGCTHYPLIQ 190
Query: 207 HVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLM 264
F++ V LD +D +A+ ++ R H + +G P + L
Sbjct: 191 KEFKEAINDKNVTILDPADQVAQYTFNVMRRDGLFSDGNEKVSHEYYTTGDP-TSFDHLA 249
Query: 265 QGF 267
+ F
Sbjct: 250 RTF 252
>gi|121612969|ref|YP_001001295.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176]
gi|167006189|ref|ZP_02271947.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176]
gi|87249921|gb|EAQ72880.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176]
Length = 247
Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 17/258 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + + +++
Sbjct: 3 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFEQF 61
Query: 76 QPVLSVIACNTAFTLIKDELR--STFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPAT 131
Q + +IACNTA D LR + FP + G IK A + ++ I +++T AT
Sbjct: 62 QIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIK--ALHDKNKEILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S +I+ +++ + VEE + D ++ +E F K
Sbjct: 120 IKSEEYQKRLLS-QGYTNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITT 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 173 PDALILACTHFPLLGCSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 230 ASSDVESLKNTAKIWLNL 247
>gi|251773011|gb|EES53567.1| glutamate racemase [Leptospirillum ferrodiazotrophum]
Length = 315
Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 8/254 (3%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+ L PE F+Y+ D FPYG+ A+ + + +L +Y+
Sbjct: 49 ALFDSGMGGLSVLRHFLELFPEEDFLYLGDMARFPYGSKSREAICRFAVEDAG-LLSRYR 107
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRT 135
PV V AC T + D L S FP + +G V A + A A T++G + +L T T+R
Sbjct: 108 PVTLVAACFTVSSQALDILVSRFPEIRVVGMVEAGARAALAMTRTGHVGVLGTEGTIRSG 167
Query: 136 YTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ Q ++ +S + A VEE +I E ++ + +E D
Sbjct: 168 AYPAIFQRLGGQETNVFGISCPLFAPMVEEGWIDGEIPERVAREYLAPI-VEGRTPDVDT 226
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
I+L CTHY + + + ++D +A + L R + + F++
Sbjct: 227 IILGCTHY-PPLLPLLRRILPHITFIDPGRELA---QAELLRSKPRTGQGKGHVSFFVTD 282
Query: 255 KPDIAMRRLMQGFG 268
+ MR G
Sbjct: 283 GRERFMRVGQHLLG 296
>gi|163749944|ref|ZP_02157189.1| glutamate racemase [Shewanella benthica KT99]
gi|161330458|gb|EDQ01437.1| glutamate racemase [Shewanella benthica KT99]
Length = 254
Score = 227 bits (581), Expect = 9e-58, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 28/249 (11%)
Query: 45 ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF 104
D+ PYG + L + L +D + K + VIACNTA TLI LR+ ++
Sbjct: 2 FDNARLPYGELAEQELISGCVALITDFVQKQSVSMVVIACNTASTLILPSLRAVL-NIPV 60
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164
+G VPAIK AA +++ I +L+TP T++R YT LI + S C + L ++ L E+
Sbjct: 61 VGVVPAIKPAALLSRNKHIGLLATPGTIKRAYTHELIAQFASGCSVELYATSELVMLAEQ 120
Query: 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
A G + + E+ + + D +VL CTH+P++ ++ V LD+
Sbjct: 121 KAAGDPVTQQELAQILSPIL----ESELDTLVLGCTHFPILKQEMQEYLGDRVSLLDSGK 176
Query: 225 SIARRA--------------------RCLLPRINTHQTRV---FDDHALFLSGKPDIAMR 261
++A R R ++ +++ A + S + ++
Sbjct: 177 AVAARVLTLKLQTQQEWVLAKQDNECRDVIRERVEQESKNMLYGTGLAYYTSEEIGQGLK 236
Query: 262 RLMQGFGLK 270
+ + FGL
Sbjct: 237 KTLAKFGLS 245
>gi|294676108|ref|YP_003576723.1| glutamate racemase [Rhodobacter capsulatus SB 1003]
gi|294474928|gb|ADE84316.1| glutamate racemase [Rhodobacter capsulatus SB 1003]
Length = 270
Score = 227 bits (581), Expect = 9e-58, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 97/274 (35%), Gaps = 23/274 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL V + + +PE F+Y D+ PYG + + D+
Sbjct: 2 AVGVFDSGLGGLTVYEAVSKRLPEVAFVYYGDNAHAPYGVRTPDDIYNLTCRGVQRLWDE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ + LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALKRMQEHWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAYRAIGVDVEAQPCGGVVDAIEAG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ + +L CTHYPL+ F++ V ++ +A L R
Sbjct: 179 A--LKRRMPHPEAAILGCTHYPLMQKTFQEALGPQVKVYSQANLVAESLADYLTRKPEFL 236
Query: 242 TRVFDDHALFLSGKPDI----AMRRLMQGFGLKS 271
+G A + L ++
Sbjct: 237 G-PGTVSKFITTGDAASVSMHATQFLRHRISFEA 269
>gi|295691544|ref|YP_003595237.1| glutamate racemase [Caulobacter segnis ATCC 21756]
gi|295433447|gb|ADG12619.1| glutamate racemase [Caulobacter segnis ATCC 21756]
Length = 282
Score = 227 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 59/276 (21%), Positives = 104/276 (37%), Gaps = 26/276 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P+ F Y+AD PYG + + D+
Sbjct: 2 IGVFDSGVGGLTVHRALVQRLPQADFTYLADQANAPYGVRTGEDIVALTKAGCEHLFDRG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF---------PSMAFLGAV-PAIKQAA---------- 115
+ V+ACNTA + L+ T+ + LG + P I++A
Sbjct: 62 A-SVVVLACNTASAIALRRLQQTWLPSYRKELGRPVNILGIIVPTIEKATGLPWEHEAER 120
Query: 116 ---AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
Q ++ + +T AT+R I + + L +E A + +
Sbjct: 121 RGEKVEQLDILGVFATQATVRSRVYEIEIDKRKQDLAVFSEACPELVPLIEGDASAVDLA 180
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+ ++ +E + G+ D +VL CTHY +I +FR P + ++ A
Sbjct: 181 K-AVQGHVEA-LKTRIGRYPDRVVLGCTHYEIIADIFRAALPAGTPLIQQPEATADALEL 238
Query: 233 LLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
L R + +G P + +G
Sbjct: 239 YLERHPEYDPGQGGSRVFLTTGTPGPQNGLVQSFWG 274
>gi|78212667|ref|YP_381446.1| glutamate racemase [Synechococcus sp. CC9605]
gi|123578331|sp|Q3AKJ1|MURI_SYNSC RecName: Full=Glutamate racemase
gi|78197126|gb|ABB34891.1| Glutamate racemase [Synechococcus sp. CC9605]
Length = 265
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 17/258 (6%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
FDSG+GGL VL+++ +Y+ D PYGN + +++ + + D+
Sbjct: 7 GFFDSGLGGLTVLRRVLERHGSVPCVYLGDTARVPYGNRQPDDIRRIAAEVVGWLRDQK- 65
Query: 77 PVLSVIACNTAFTLIKDEL--RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNT L +D ++ P + +G AAA ++ + +L+TPAT+
Sbjct: 66 VSTVVMACNTTNALARDVADGQAGAPVIGLIG------AAAAMVETRRVGVLATPATVAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ I + + + +E + D++++ + +
Sbjct: 120 SAYRASIEALHPGSMVIEQACPAFVPLIESG----DMNSDDLRRAAQAYLEPLLAASVES 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT----HQTRVFDDHAL 250
IVL CTHYPL+V + RQL P V +D + +AR+ +L + +
Sbjct: 176 IVLGCTHYPLLVPLLRQLLPESVQIIDPAIGVARQLDAVLRSPGPISAVPRPFSLESCRF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
++ PD R G
Sbjct: 236 CVTADPDGFAMRATPWLG 253
>gi|163803387|ref|ZP_02197262.1| glutamate racemase [Vibrio sp. AND4]
gi|159172791|gb|EDP57636.1| glutamate racemase [Vibrio sp. AND4]
Length = 237
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 9/233 (3%)
Query: 40 HFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF 99
++Y+ D+ +PYG E L R+ L + +++++Q + VIACNTA T++ LR+
Sbjct: 2 DYLYLFDNEAYPYGELEHDVLINRVNTLVAALVEEHQADIVVIACNTASTIVLPSLRANL 61
Query: 100 PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA 159
++ +G VPAIK A+ G + +++TPAT+ R YT LI + + L+ S L
Sbjct: 62 -AIPVVGVVPAIKPASLLASQG-VGLIATPATVTRQYTRELIRDFAQGKPVELLGSTRLV 119
Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
EE G I E++ + + DV VL CTH+PLI Q V
Sbjct: 120 DMAEEKLRGQIIHIPELESILLPL-----RHKVDVAVLGCTHFPLIKDEIHQALGGDVML 174
Query: 220 LDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP--DIAMRRLMQGFGLK 270
+D+ +IARR R LL +T ++ S P + A+ + G
Sbjct: 175 IDSGKAIARRVRALLASDKEQETAEEGSKKIYASASPWQEDALNACLANLGFN 227
>gi|291166140|gb|EFE28186.1| glutamate racemase [Filifactor alocis ATCC 35896]
Length = 257
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I IFDSGIGGL VL ++P +FIY AD PYG ++ + + + + K
Sbjct: 2 NIGIFDSGIGGLSVLHHALKIIPHANFIYYADRKNVPYGEKSVFEIQTFIDEIMNFFISK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
VIACNTA ++ E R FP +G PA+K+A + I + +TP T+
Sbjct: 62 K-VDALVIACNTASSVATKEYRDKFP-FPIIGMEPAVKKAVETYTEKQQRILVAATPITI 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L++ L++ L E + E+++ I+ +
Sbjct: 120 QGNKLRQLLNRVDKYHQADLIALPKLVHFAELK----QFDSLEVEEYIKTALNQYCAVDY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
IVL CTH+ F+++ ++D ++ ++ LL + ++ +
Sbjct: 176 SAIVLGCTHFNYFKPSFQRIFSKKTQFIDGNEGTIKQ---LLRKAPLIESY-SQSVQFYF 231
Query: 253 SGKP 256
SG P
Sbjct: 232 SGIP 235
>gi|296136513|ref|YP_003643755.1| glutamate racemase [Thiomonas intermedia K12]
gi|295796635|gb|ADG31425.1| glutamate racemase [Thiomonas intermedia K12]
Length = 263
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 19/245 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P+ IYVAD PYG+ D L++R + ++ +
Sbjct: 7 IGVFDSGVGGLTVLRALRAQLPQASLIYVADSAHAPYGDRPDDFLQQRARQITRFLIGQG 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFP-----SMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ V + + F+G P IK A A + + + +L+TP+
Sbjct: 67 ARLIVV-------ACNTATAAAIAALRAEFDLPFVGIEPGIKPALARSDARRVGVLATPS 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR L+H++ + L LA VE ++ ++++ I
Sbjct: 120 TLRSAKFRALLHTHAAAAEPVLQPCPGLADAVERG----DLQAPQVQQLIRQFCAPLRTA 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYPL+ + V LD ++ +AR+A L + + + + L
Sbjct: 176 GCDTVVLGCTHYPLLAEQIQAELGPQVHLLDTAEPVARQAARLWQQTSAQRPELP---QL 232
Query: 251 FLSGK 255
+ +G
Sbjct: 233 YTNGD 237
>gi|239618385|ref|YP_002941707.1| glutamate racemase [Kosmotoga olearia TBF 19.5.1]
gi|239507216|gb|ACR80703.1| glutamate racemase [Kosmotoga olearia TBF 19.5.1]
Length = 277
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 15/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMP-EYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSGIGG+ VL+++ +P F Y D PYG+ +KK + +F D
Sbjct: 7 IGIFDSGIGGITVLRELMKSVPTGVRFHYFGDTARVPYGSKPPSEIKKYVHQVF-DFFRS 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132
V ACNT+ +++ E + + + F + + +A + ++I+ T T+
Sbjct: 66 LSVEAIVTACNTSDSILSKEEKKSL-EVPFFSIIDPVTEALKNDLPINSSVAIIGTRNTI 124
Query: 133 RRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y LI S + C I + + VEE + E ++ + G +
Sbjct: 125 KRSLYLKKLIGS-DNICRISQKACPLFVPLVEEGVWEGTLAETIVRYYLRGI----KRFA 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYP ++ + V +D ++ +AR + + Q V +
Sbjct: 180 PDYLILGCTHYPFLLKPIKTYLGEDVKVVDPAEYVAREFKAWIE---NQQNDVDSTVVFY 236
Query: 252 LSGKPDIAMRRL-MQGF 267
++G+ L M GF
Sbjct: 237 VTGEVVSFTESLKMMGF 253
>gi|290967732|ref|ZP_06559287.1| glutamate racemase [Megasphaera genomosp. type_1 str. 28L]
gi|290782248|gb|EFD94821.1| glutamate racemase [Megasphaera genomosp. type_1 str. 28L]
Length = 267
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 94/256 (36%), Gaps = 7/256 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I IFDSG+GGL V+ K+R L+P + IYV D PYG+ + +
Sbjct: 3 KSKLPIGIFDSGVGGLTVVNKLRMLLPHENIIYVGDTKRNPYGSRTAAEILSYTRDIL-R 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L I CNT + +L P +G IK A + G I++ +T
Sbjct: 62 FMSAQSVKLVAIGCNTVTATVYPQLMQEVP-YPLIGMSKGIKTAQKISAGGTIAVFATEL 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ ++ I LA +E +I ++
Sbjct: 121 TIANHSHKKAAAAWDPGLKIIEQPCPELAGLIERGYLQGT----KIMAPLQKYLAPVLQT 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-A 249
+ D + CTH+P I +F LS + ++D + +A +L + +
Sbjct: 177 QADTAIFGCTHFPFIQPLFEMLSQDRLAFVDPAHEMALEVLEVLKKADLLNRNSHSGTLQ 236
Query: 250 LFLSGKPDIAMRRLMQ 265
L + + Q
Sbjct: 237 LCFTDATERGGMLAAQ 252
>gi|126726358|ref|ZP_01742199.1| glutamate racemase [Rhodobacterales bacterium HTCC2150]
gi|126704221|gb|EBA03313.1| glutamate racemase [Rhodobacterales bacterium HTCC2150]
Length = 270
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 97/266 (36%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL M+ +P+ F+Y D + PYG + + + ++
Sbjct: 2 AVGVFDSGLGGLTVLAAMQERLPDQAFVYYGDQINSPYGVRTPDDIYQLTAAATHSLWEQ 61
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQEEGVPKGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TP+T+ + + + +E+ + + + ++ +E
Sbjct: 121 NVALFATPSTVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEDG--DMMLADALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ F+ V + +A L R
Sbjct: 179 A--LKRRMPNPHAAILGCTHYPLMQSEFQDALGADVKVFSQAQVVADSLADYLERHPNM- 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
T + +G P R Q
Sbjct: 236 TGQAKETKYLTTGDPTKVTMRATQFL 261
>gi|152991198|ref|YP_001356920.1| glutamate racemase [Nitratiruptor sp. SB155-2]
gi|166231046|sp|A6Q504|MURI_NITSB RecName: Full=Glutamate racemase
gi|151423059|dbj|BAF70563.1| glutamate racemase [Nitratiruptor sp. SB155-2]
Length = 253
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 48/254 (18%), Positives = 90/254 (35%), Gaps = 16/254 (6%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL V++ + IY D PYG + + + + + + +
Sbjct: 4 GVFDSGVGGLTVVKSLLEHGLFDEIIYFGDTARVPYGPKDKNTIIRYSLE-AQEFFKNFD 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATLR 133
+ + ACN+ +ELRS S +G + A I ++ T AT+
Sbjct: 63 VDILITACNSVSAHAIEELRSNA-SFPVIGVIEPGVLALQNRGLDPKSQILVIGTQATIG 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ + +I ++ + VEE + E ++ + D
Sbjct: 122 SGKYQKLLREHGYN-NILAKATPLFVPIVEEEIFEGPVLEATLQHYFDSL-------HPD 173
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
I+L CTH+PLI + + ++I + + + LF S
Sbjct: 174 AIILGCTHFPLIQDAIADYFNNEAVLIHSGEAIVEHLQ---KELGIKARKKTPSLKLFAS 230
Query: 254 GKPDIAMRRLMQGF 267
P+ +
Sbjct: 231 ENPEKLKKIAAHWL 244
>gi|119386680|ref|YP_917735.1| glutamate racemase [Paracoccus denitrificans PD1222]
gi|189030363|sp|A1B945|MURI_PARDP RecName: Full=Glutamate racemase
gi|119377275|gb|ABL72039.1| glutamate racemase [Paracoccus denitrificans PD1222]
Length = 270
Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 94/266 (35%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + MP+ +Y+ D+ PYG + + + +
Sbjct: 2 AVGVFDSGLGGLTVLSAIAARMPDLPLVYLGDNAHTPYGVRDADDIFDLTCAGVERLWAE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ T+ LG + +A + G
Sbjct: 62 G-CDLVILACNTASAAALKRMQETWLPKDKRVLGVFVPMIEALTERRWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E + E + +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEMG--DEILAEALVTSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + +L CTHYPL+ F++ V + +A L R
Sbjct: 179 ALL--RRMPHPEAAILGCTHYPLVQAAFQKALGPQVTVYSQPNLVAESLEDYLGRHPEML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P+ + Q
Sbjct: 237 G-AGNVSRFLTTGDPERVSGKATQFL 261
>gi|223038331|ref|ZP_03608625.1| glutamate racemase [Campylobacter rectus RM3267]
gi|222880188|gb|EEF15275.1| glutamate racemase [Campylobacter rectus RM3267]
Length = 519
Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 10/236 (4%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N +K L+ I FDSGIGGL VL + F+Y AD+ PYG + +
Sbjct: 8 NLTLDKDLK--IAFFDSGIGGLSVLAEALGRFSGAEFLYFADEDHVPYGTKSRAEIVRLS 65
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ ++ + VIACNTA + ELRS F S+ +G PA+K AA S
Sbjct: 66 LDAVGFLVS-HGAEAVVIACNTATSAAISELRSAF-SVPIIGMEPAVKLAADRFGSRPTL 123
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+++TP T+ + L+ +C I + L E+A ++ ++ ++G
Sbjct: 124 LIATPLTIAGEKLARLVGRL--ECEIWSLPLPRLV----EFAQDLEFDSPAVRTYLQGEL 177
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ E R +VL CTH+ V R++ P V +D D R L +
Sbjct: 178 GKFELARLGSLVLGCTHFNYFKDVLREILPPHVRIIDGIDGTLNRLVSELAARGKN 233
>gi|138896233|ref|YP_001126686.1| glutamate racemase [Geobacillus thermodenitrificans NG80-2]
gi|134267746|gb|ABO67941.1| Glutamate racemase [Geobacillus thermodenitrificans NG80-2]
Length = 209
Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 7/203 (3%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
L +Y + VIACNTA ++ DE+R+ + LG V P + A T++G I ++
Sbjct: 1 MIHYLQQYPLKMLVIACNTATAVVLDEVRAKL-DIPVLGVVHPGARAALKATKNGHIGVI 59
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+R + S + H+ ++ VE + ++ +
Sbjct: 60 GTVGTVRSKAYEKALQSINPRVHVESLACPKFVPLVESG----DFEGEKALAIVAESLAP 115
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-F 245
+ DV++L CTHYPL+ + R+ V + + D AR +L + T
Sbjct: 116 LRPRPIDVLILGCTHYPLLAPLIREYMGKKVKLICSGDETAREVSAILHHSHLLYTGGCE 175
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
+H F +G ++ + + FG
Sbjct: 176 PEHLFFTTGSKELFEKISRKWFG 198
>gi|259502881|ref|ZP_05745783.1| glutamate racemase [Lactobacillus antri DSM 16041]
gi|259169132|gb|EEW53627.1| glutamate racemase [Lactobacillus antri DSM 16041]
Length = 257
Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 98/251 (39%), Gaps = 10/251 (3%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+ +R +P+ ++V D FPYG +++ + + ++ ++
Sbjct: 1 MDSGLGGLSVLRVLRQELPDESLLFVGDQGHFPYGTKTQAEVRQLALAIGRFLV-RHDAK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
L V+ACNTA L + +G + AA T I ++ T +T++
Sbjct: 60 LMVVACNTATGAALPAL-QAALPIPVVGVIRPGATAALATNPRTIGVIGTDSTIKNGAYE 118
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+H + + L + VE G ++ ++ + + ++L
Sbjct: 119 RTLHELQPAVKVVSQPAQPLVAIVEHGQTGTP----AAQRAVDKVLQPFASQPVENLILG 174
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG---K 255
CTH+P + + V +D + + + +L T L+ +G
Sbjct: 175 CTHFPFLSKEIQHKLGPAVRLIDPAYETVQTVKQVLAARQLAATG-GQQTVLYTTGRVAD 233
Query: 256 PDIAMRRLMQG 266
RL+ G
Sbjct: 234 LQTGADRLLAG 244
>gi|83951823|ref|ZP_00960555.1| Glutamate racemase [Roseovarius nubinhibens ISM]
gi|83836829|gb|EAP76126.1| Glutamate racemase [Roseovarius nubinhibens ISM]
Length = 270
Score = 225 bits (576), Expect = 4e-57, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 93/266 (34%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ +Y D+ PYG + + +
Sbjct: 2 AVGIFDSGLGGLTVLSAIEKRLPDLPLVYFGDNAHAPYGVRDADDIHNLTRQHVEYLWA- 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FP-SMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ P LG + +A G
Sbjct: 61 NGCDLVILACNTASAAALRRMQEAGVPQGKRVLGVFVPLIEALTERNWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + S + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQSCGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ +L CTHYPL+ F+ V +A L R +
Sbjct: 179 A--LKRKMPNPQAAILGCTHYPLMEAQFQAALGEDVAVYSQPSLVADSLADYLGRRPDMR 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G P R Q
Sbjct: 237 G-AGKATRFVTTGDPGRVSDRATQFL 261
>gi|257468491|ref|ZP_05632585.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|317062751|ref|ZP_07927236.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688427|gb|EFS25262.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 263
Score = 225 bits (576), Expect = 4e-57, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 108/259 (41%), Gaps = 11/259 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++SI IFDSGIGGL +L+K+R L+P + IY D PY ++ +
Sbjct: 2 NKESSIGIFDSGIGGLTILKKIRELLPRENIIYYGDWKNNPYSEKSKEDIQNLSAKIMDF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTP 129
++ + VI C+ D L++ + + +G + +K A ++ I+++ +
Sbjct: 62 LI-RNNCKAVVIGCSIFSAASLDFLKAQYK-IPIIGMIEGGVKSAILESKQKKIAVMGSA 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I + ++ +S L + +E+ + E+ ++ +
Sbjct: 120 FTIKSNVYEKSIKEINPEITVYQISCKALCTMLEKGWENYSD-----RIEVLESYLCQIP 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDH 248
D ++L THYP I++ ++ +D+S A +L + + +
Sbjct: 175 DTADTLILGGTHYPFILNDIKKFF--NKKIVDSSVESAIELFRILGQEDLLREGYKKGRI 232
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+++G +I + F
Sbjct: 233 EFYINGDKEIFKDVAEKLF 251
>gi|262199960|ref|YP_003271169.1| glutamate racemase [Haliangium ochraceum DSM 14365]
gi|262083307|gb|ACY19276.1| glutamate racemase [Haliangium ochraceum DSM 14365]
Length = 268
Score = 225 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 7/221 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V++ +R +P+ Y+ D PYG+ +++ + +L++
Sbjct: 8 IGVFDSGVGGLTVVRAVRAALPDRDIAYLGDTARVPYGSKSARTVERYALACQRFLLER- 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L ++ACNTA L + P A A + I ++ T AT+
Sbjct: 67 EVDLVLVACNTASATALPALAAASQVPVVGVVEPGAASAVAASTCMHIGVIGTLATVGSG 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
IH+ + V+ +L EE I ++ + F ++ D +
Sbjct: 127 AYPRAIHALAPGAAVSAVACPLLVPLAEEGWVDDDIARAVARRYLARLF--EQDAEIDTL 184
Query: 196 VLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARC 232
VL CTHYPL+ V + L PV +D++ ++A AR
Sbjct: 185 VLGCTHYPLLAEVLAETAAALVGHPVAIVDSASAMAEVARA 225
>gi|16127933|ref|NP_422497.1| glutamate racemase [Caulobacter crescentus CB15]
gi|221236753|ref|YP_002519190.1| glutamate racemase [Caulobacter crescentus NA1000]
gi|13425469|gb|AAK25665.1| glutamate racemase, putative [Caulobacter crescentus CB15]
gi|220965926|gb|ACL97282.1| glutamate racemase [Caulobacter crescentus NA1000]
Length = 289
Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 104/276 (37%), Gaps = 26/276 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P+ F Y+AD PYG + + + ++
Sbjct: 9 IGVFDSGVGGLSVHRALVQRLPQADFTYLADQANAPYGVRSGEDIVELTKAGCIRLFERG 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTF---------PSMAFLGAV-PAIKQAAAYTQSG---- 121
L V+ACNTA + L+ T+ + LG + P I++A
Sbjct: 69 A-SLVVLACNTASAIALRRLQQTWLPDYRKDIGRPVNILGIIVPTIEKATGLPWEHEAER 127
Query: 122 ---------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
++ + +T AT+R I + + L +E A ++I
Sbjct: 128 RGEMVQALDILGVFATQATVRSRVYEIEIDKRKQDLAVFSEACPELVPLIEGDASVVEIA 187
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+ ++ ++ + G+ D +VL CTHY +I +FR P + + A
Sbjct: 188 K-AVEGHVQA-LKTRIGRYPDRVVLGCTHYEIIADIFRAALPAGTPLIQQPAATAEGLAL 245
Query: 233 LLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
L R + +G P + +G
Sbjct: 246 YLERHPEYDVGAGGGRVFLTTGTPGPQNGLVQSFWG 281
>gi|317404652|gb|EFV85049.1| glutamate racemase [Achromobacter xylosoxidans C54]
Length = 236
Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 17/234 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I ++DSG+GGL VL+ +R +P H +YVAD PYG +++R + + ++ +
Sbjct: 6 PIGVYDSGVGGLSVLRAIREALPHEHLLYVADSAHVPYGEKTQQYVQQRALAIADYLVSR 65
Query: 75 YQPVLSV------IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ V LR+ P +A +G PAIK AA T+SG++ + +T
Sbjct: 66 RANAMVVACNTAT-------AAAIAALRARHPDLAIIGVEPAIKPAAHLTRSGVVGVFAT 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + L+ + I +VE + + +
Sbjct: 119 TGTLASPKFAALVQREAPEIRILFRPCPEWVLQVERGEIQGEAAARVVAAPVHELLA--- 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTH+P + + + V L+ +ARR R L
Sbjct: 176 -QGADALVLGCTHFPFLHDAIQAAAGPAVPLLETGGPVARRLRHQLQERGLLAG 228
>gi|197103587|ref|YP_002128964.1| glutamate racemase [Phenylobacterium zucineum HLK1]
gi|229486245|sp|B4RCD6|MURI_PHEZH RecName: Full=Glutamate racemase
gi|196477007|gb|ACG76535.1| glutamate racemase [Phenylobacterium zucineum HLK1]
Length = 283
Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats.
Identities = 64/280 (22%), Positives = 106/280 (37%), Gaps = 32/280 (11%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL V ++ P+ F+Y+AD PYG + + + +
Sbjct: 2 AIGVFDSGVGGLTVHHRLVERFPDADFVYLADQANAPYGGRPGEEIVELTKAGCIRLFEA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF---------PSMAFLG-AVPAIKQAA--------- 115
L V+ACNTA ++ L+ T+ ++ LG VP I+ A
Sbjct: 62 G-CDLVVLACNTAASVALRRLQQTWLPGYRRETGRALNVLGIVVPTIEAATGLPWEHEAE 120
Query: 116 ----AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ ++ + STPAT R I + LA +E A
Sbjct: 121 RRGEKVEKLDILGVFSTPATARSRVYEIEIDKRRQDVAVFSEPCPELARMIEAGA----- 175
Query: 172 KEDEIKKEIEGC---FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+E+K IEG + G+ D +L CTHY ++ +FR+ P + ++ A
Sbjct: 176 PREELKAVIEGHVQALRTRIGRAPDRAILGCTHYEIVADLFREALPPGTPLIRQPEATAD 235
Query: 229 RARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
L R +G+P + +G
Sbjct: 236 ALARYLDRHPEFDPGRSGLRRFLTTGEPGAQNSLVETFWG 275
>gi|257459967|ref|ZP_05625071.1| glutamate racemase [Campylobacter gracilis RM3268]
gi|257442408|gb|EEV17547.1| glutamate racemase [Campylobacter gracilis RM3268]
Length = 400
Score = 224 bits (573), Expect = 8e-57, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 8/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGGL VL + F+Y AD+ PYG + + + ++ +
Sbjct: 3 IAFFDSGIGGLSVLAEALQRFSGAEFLYFADEDHVPYGTKSRAEIVRLSLDAVGFLVSRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + ELR F S+ +G PA+K AA + +++TP T+
Sbjct: 63 A-DGVVVACNTATSAAISELRGAF-SVPVIGMEPAVKLAADSFGARPTLLIATPLTISGE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ +C ++ L E+A ++ ++ + + E R +
Sbjct: 121 KLARLVGRL--ECETWSLALPRLV----EFAQDLEFDSPAVRAYLSEELAKFELARLGSL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+ V R++ P V +D D R L
Sbjct: 175 VLGCTHFNYFKDVLREILPPHVRIIDGIDGTLNRLASEL 213
>gi|315037664|ref|YP_004031232.1| glutamate racemase [Lactobacillus amylovorus GRL 1112]
gi|312275797|gb|ADQ58437.1| glutamate racemase [Lactobacillus amylovorus GRL 1112]
Length = 268
Score = 224 bits (573), Expect = 9e-57, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 11/243 (4%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
V +K+ +P +++ D+ PYG+ + + + +L+K L + ACNTA
Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRIKEEIIELVRKSVQFLLEK-NVKLIIFACNTA 76
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
+ +++ +G + + AA T++ ++++ST AT + I
Sbjct: 77 TAMAMSTIQAEI-DPQIIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIRFRDP 135
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ + +++ LA VE + K ++ +GK D +++ CTHYPLI
Sbjct: 136 EIQVTELAAPKLAPLVEAQK-----DHETNLKVVKESLTPLQGKDFDTLIMGCTHYPLIQ 190
Query: 207 HVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLM 264
F++ V LD +D +A+ ++ R H + +G P + L
Sbjct: 191 KEFKEAINDKNVTILDPADQVAQYTFNVMRRDGLFSDGNEKVSHEYYTTGDP-TSFDHLA 249
Query: 265 QGF 267
+ F
Sbjct: 250 RTF 252
>gi|332528172|ref|ZP_08404203.1| aspartate and glutamate racemase:glutamate racemase [Rubrivivax
benzoatilyticus JA2]
gi|332112743|gb|EGJ12536.1| aspartate and glutamate racemase:glutamate racemase [Rubrivivax
benzoatilyticus JA2]
Length = 247
Score = 224 bits (573), Expect = 9e-57, Method: Composition-based stats.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 7/240 (2%)
Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88
L+ +R +P F+YVAD PYG+ L R + + + L V+ACNT
Sbjct: 2 LRALRARLPAERFVYVADSGHAPYGDRPRPYLLGRAGAVAGFFVAQRAKAL-VLACNTIS 60
Query: 89 TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148
+ + LR+ ++ + PAIK A A T+SG++ +L+T AT+ L + +
Sbjct: 61 VVAAETLRAHH-ALPIVAMEPAIKPAVAATRSGIVLVLATTATVHSPAVERLCRIWGREV 119
Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
I L L +E+ + + + +E D++VL CTHY +
Sbjct: 120 EILLQPCPGLVELIEQG----RFADPATRTLLERYLRPALDAGADMVVLGCTHYAFVQDE 175
Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
R+L+ V ++ SD++AR+ L + SG P+ A+RR ++ G
Sbjct: 176 IRRLAGAAVQVIEPSDAVARQLVHRLGPALAPAGAAGASTCYYSSGDPE-ALRRFLELMG 234
>gi|307292858|ref|ZP_07572704.1| glutamate racemase [Sphingobium chlorophenolicum L-1]
gi|306880924|gb|EFN12140.1| glutamate racemase [Sphingobium chlorophenolicum L-1]
Length = 267
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 80/251 (31%), Positives = 123/251 (49%), Gaps = 2/251 (0%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L FDSG+GGL +L + +P+ +Y AD GFPYG + + R+ L +++
Sbjct: 7 APLLFFDSGVGGLSILAPAQAALPQAPVVYAADSAGFPYGTRSEADIAARVPALLGRLVE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+Y+P L+VIACNTA T+ +R+ + +G VPAIK AA +QS + +L T AT+R
Sbjct: 67 RYRPRLAVIACNTASTIALSAVRAAL-DIPVVGTVPAIKPAALLSQSRVFGVLGTDATVR 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ Y L Y S C + S L E G + + + G + G R D
Sbjct: 126 QPYVDRLAAEYGSDCTVLRHGSAALVQLAEAKLRGEPLDPAIARDALAGLLDQPGGDRMD 185
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTH+PL+ SP P+ ++ + IARR L + + A+F
Sbjct: 186 IVVLACTHFPLVEAELAAASPRPLRFVHGGEGIARRI-AYLTQGQPWPSEPLPGTAVFTR 244
Query: 254 GKPDIAMRRLM 264
+ RL
Sbjct: 245 LDESVEQLRLA 255
>gi|154249839|ref|YP_001410664.1| glutamate racemase [Fervidobacterium nodosum Rt17-B1]
gi|154153775|gb|ABS61007.1| glutamate racemase [Fervidobacterium nodosum Rt17-B1]
Length = 276
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 22/256 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSGIGGL VL+K+ +P H+IYVAD + PYG ++ + +++K
Sbjct: 2 NIGLFDSGIGGLSVLKKLIETLP-AHYIYVADTMRAPYGTKSSETIETFSREIIGFLMEK 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ ACNT+ + + R+ F + + + A A+ Y ++++ T T++
Sbjct: 61 KVERIF-AACNTSDST-LSKYRNNFR-IPYHSIIQAGVSASKYE---RVAVIGTHTTVQS 114
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
N + + + + S VEE + E +K +E + D
Sbjct: 115 GIYKNALE--AKGKKVMQRPAQLFVSLVEEGIFYGNMVEAVVKFYLE----PFRKFKPDE 168
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTH+P + + ++ V +D +D + R L R F +++
Sbjct: 169 LILGCTHFPFLKDIIMRVMG-NVRVIDPADELVREVSHL-----VLNGRPF--VEFYVTS 220
Query: 255 KPDIAMRRLMQGFGLK 270
PD R++ + G +
Sbjct: 221 NPDEFERKIKK-IGFR 235
>gi|84503079|ref|ZP_01001175.1| Glutamate racemase [Oceanicola batsensis HTCC2597]
gi|84388623|gb|EAQ01495.1| Glutamate racemase [Oceanicola batsensis HTCC2597]
Length = 270
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + + D
Sbjct: 2 AVGIFDSGLGGLTVLDAVTKRLPDVPFVYFGDNAHAPYGVRDADDIYDLTTRAVARMFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L V+ACNTA ++ ++ LG + +A Q G
Sbjct: 62 G-CDLVVLACNTAAAAALRRMQESWVPADKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++++ R + +L CTHYPL+ VF+ V ++ +A L R
Sbjct: 179 A--LKRKMPRPEAAILGCTHYPLMDEVFQAALGPEVAVYSQANLVAASLADYLGRRPEFI 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P R Q
Sbjct: 237 GPGTESL-FLTTGDPARVSSRATQFL 261
>gi|283953730|ref|ZP_06371261.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 414]
gi|283794771|gb|EFC33509.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 414]
Length = 247
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 15/245 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+ + IY D PYG + + K + + ++
Sbjct: 3 IGVFDSGVGGISVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEAL-EFFKQF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132
Q + +IACNTA D LRS G + A ++ T ++ I +++T AT+
Sbjct: 62 QIDMLIIACNTASAYALDALRSKA-HFPIYGVIDAGVKSTIKTLPDKNKEILVIATKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + S +I+ +++ + VEE + ++ + +
Sbjct: 121 KSEEYQKRLLS-QGYTNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITVP------ 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 DALILACTHFPLLGCSLSKYFGDKTKLIHSGDAIVEFLK---ERENISSKNYKAKLHFYA 230
Query: 253 SGKPD 257
S +
Sbjct: 231 SSDVE 235
>gi|114771082|ref|ZP_01448522.1| Glutamate racemase [alpha proteobacterium HTCC2255]
gi|114548364|gb|EAU51250.1| Glutamate racemase [alpha proteobacterium HTCC2255]
Length = 269
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 55/274 (20%), Positives = 99/274 (36%), Gaps = 24/274 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V Q++ +P+ +Y+ D+ PYG + + + +
Sbjct: 2 PIGIFDSGLGGLTVQQEIASRIPDQSLVYLGDNKYAPYGVRDHEQIYSLTQNAIERLWNA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA + ++ + + LG + +A Q G
Sbjct: 62 G-CDLVIVACNTASAVAVKRMQEEWLPENKRVLGVFVPLIEAVTERQWGDNSAPKEVGVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + L +EE ++ E ++ +
Sbjct: 121 QVALFATPATVATRAFQRELAFRAIGVDVEAQPCGGLVDAIEEN--DFELAEALVQSHVS 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ VL CTHYP++ F + V +A L R +
Sbjct: 179 ALL--RRMPNPQAAVLGCTHYPILKKCFEKALGPNVQVYSQGRIVAESLMHYLNRH--PR 234
Query: 242 TRVFDDHALFLSGKPD----IAMRRLMQGFGLKS 271
+ + +G D A R L + KS
Sbjct: 235 FKEKGEALFLTTGDVDKVSLAATRFLSKKMLFKS 268
>gi|71908727|ref|YP_286314.1| glutamate racemase [Dechloromonas aromatica RCB]
gi|71848348|gb|AAZ47844.1| glutamate racemase [Dechloromonas aromatica RCB]
Length = 269
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+ +R +P+ F Y AD PYG+ + L++R + + +
Sbjct: 11 NQPIAVFDSGLGGLTVLRALRDRLPQEDFFYFADTRFLPYGDRPEVFLRERGVLIAKALA 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L + T E + + P +K A A T+SG+I +L+T TL
Sbjct: 71 KQGAKALVIAC--NTATAAAAEAIRAAIDLPVVALEPGVKPAVALTRSGVIGVLATTRTL 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L+ ++ + + + LA +E ++ ++
Sbjct: 129 ASERFQRLVGNHANHLRVIAQACPGLAEAIEAQGP----DSPQVAALLDAFVTPLAAADA 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV+VL CTHYP + + P LD + +AR+ LL + +
Sbjct: 185 DVVVLGCTHYPWVAGAIARRMPVGTSLLDTGEPVARQLERLLAASHLLGGG-HGRLTVAT 243
Query: 253 SGKPDIAMRRLMQGFG 268
SG P + + +G
Sbjct: 244 SGAPAAVSATVERLWG 259
>gi|167648830|ref|YP_001686493.1| glutamate racemase [Caulobacter sp. K31]
gi|189030358|sp|B0T549|MURI_CAUSK RecName: Full=Glutamate racemase
gi|167351260|gb|ABZ73995.1| Glutamate racemase [Caulobacter sp. K31]
Length = 283
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 62/277 (22%), Positives = 100/277 (36%), Gaps = 26/277 (9%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI +FDSG+GGL V + + +P+ FIY+AD PYG + + D
Sbjct: 2 SIGVFDSGVGGLTVHRALVNRLPQADFIYLADQANAPYGGRPGEEIVALTRAGCERLFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF---------PSMAFLGAV-PAIKQAA--------- 115
L V+ACNTA + L+ T+ + LG + P I+ A
Sbjct: 62 GA-SLVVLACNTASAIALRRLQQTWLPGYRKALGRPINVLGIIVPTIEAATGLPWEHEAE 120
Query: 116 ----AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
Q ++ + STP T I + LA +E A +++
Sbjct: 121 RRGEKVEQLDILGVFSTPGTAASRVYEIEIDKRRQDVAVFSEPCPNLARMIEAGAGAVEL 180
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
E+++ ++ + G+ D +L CTHY +I +FR P + S A
Sbjct: 181 AT-EVERHVQQ-LKTRIGRYPDRAILGCTHYEIIADLFRAALPAGTPLIHQPASTADALE 238
Query: 232 CLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
R +G P + +G
Sbjct: 239 LYFQRHPELDPGTGGGRVFLTTGTPGPQNALVETFWG 275
>gi|294340641|emb|CAZ89033.1| putative Glutamate racemase [Thiomonas sp. 3As]
Length = 263
Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 19/244 (7%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+ +R +P+ IYVAD PYG+ D L++R + ++ +
Sbjct: 8 GVFDSGVGGLTVLRALRAQLPQVSLIYVADSAHAPYGDRPDDFLQQRARQITRFLIGQGA 67
Query: 77 PVLSVIACNTAFTLIKDELRSTFP-----SMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ V + + F+G P IK A A + + + +L+TP+T
Sbjct: 68 RLIVV-------ACNTATAAAITALRAEFDLPFVGIEPGIKPALARSDARRVGVLATPST 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
LR L+H++ + L LA VE ++ ++++ I
Sbjct: 121 LRSAKFRALLHTHAAAAEPVLQPCPGLADAVERG----DLQAPQVQQLIRQFCAPLRTAG 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ + V LD ++ +AR+A L + + + + ++
Sbjct: 177 CDTVVLGCTHYPLLAEQIQAELGPQVHLLDTAEPVARQAARLWQQTSAQRPELP---QIY 233
Query: 252 LSGK 255
+G
Sbjct: 234 TNGD 237
>gi|313888088|ref|ZP_07821762.1| glutamate racemase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845778|gb|EFR33165.1| glutamate racemase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 276
Score = 222 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 8/250 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I +DSG+GGL VL+ + +F++ D + PYG + +K M +
Sbjct: 3 NNVIGFYDSGVGGLSVLKVALNKIKNKNFVFFGDTLRMPYGARTNEEIKNYTMEVMGFF- 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ LS+IACNTA + E + P + A T++ +++++T + +
Sbjct: 62 EDLDVDLSIIACNTATSHGLKESNERYKYPIIGVVEPGSENALERTKTKRVALVATKSCV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ S + V L +E + + +KK ++ E
Sbjct: 122 ESGVYDKVLKSMDPSIELRSVYCPDLTLAIERGEFEEEYMDGIVKKYLDY----FEDYDF 177
Query: 193 DVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTHYPL+ F+++ V +D + A +L +Q
Sbjct: 178 DTMILGCTHYPLVEDSFKRILKKQGKKVLMVDPAYKTVLDAMNILKIEKDNQEIPNRTID 237
Query: 250 LFLSGKPDIA 259
+++G ++
Sbjct: 238 FYITGDINLF 247
>gi|254431905|ref|ZP_05045608.1| glutamate racemase [Cyanobium sp. PCC 7001]
gi|197626358|gb|EDY38917.1| glutamate racemase [Cyanobium sp. PCC 7001]
Length = 274
Score = 222 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 62/261 (23%), Positives = 100/261 (38%), Gaps = 18/261 (6%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+K+ L P +Y+ D PYG ++ + + +
Sbjct: 6 GLFDSGLGGLTVLRKVNQLYPHSPCLYLGDTARVPYGTRSPDEIRAIAAEVVRWLRWQGV 65
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
VL +ACNT+ L D + + LG + ++ + S + +L+TPAT R
Sbjct: 66 GVLL-MACNTSNALALDVAVAEA-GVPVLGLIDSVASVIS---SDRVGVLATPATARSGA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
IH+ + V +E E+++ D +V
Sbjct: 121 YRRAIHASRPDALVIEVGCPEFVPLIEAGHR----FSPELRRAALAYIAPLLAAAVDTVV 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---------PRINTHQTRVFDD 247
L CTHYPL+ + +L P V +D +++ A R LL R
Sbjct: 177 LGCTHYPLLRPLLTELLPAGVVLVDPAEAAAERLGPLLGSLGEAPEVERQGESVVPAVQR 236
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
L ++G PD G
Sbjct: 237 SRLCVTGCPDSFATGAEDWLG 257
>gi|322434927|ref|YP_004217139.1| glutamate racemase [Acidobacterium sp. MP5ACTX9]
gi|321162654|gb|ADW68359.1| glutamate racemase [Acidobacterium sp. MP5ACTX9]
Length = 271
Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 13/259 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSG GGL VL+ + L+P ++Y+ D PYG + + + + +L+
Sbjct: 9 PTIGVFDSGFGGLTVLRALLPLIPGARYLYLGDTARLPYGAKSQQTIARYALSSAAFLLE 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA L D+L+ P + +G + P AA+ + +L+T AT+
Sbjct: 69 QG-IEMLVVACNTATALALDDLKQALP-IPVVGVIAPGTAAAASANADTNVLVLATTATV 126
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + +L VEE + + ++ + E
Sbjct: 127 QSGAYTRACTAL--GLTAYEKACPLLVPLVEEGWIDHPVTAEVLRIYLTEALEE--APNA 182
Query: 193 DVIVLACTHYPLIVHVFRQ---LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
++L CTHYPL+ + + P+ +D++ + A I
Sbjct: 183 TTLLLGCTHYPLLRPMIERTLTALNHPLKIIDSATA---TAHAAAALIPASAQSAHATCT 239
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ + + R G
Sbjct: 240 FYATDSIEKFQRLGTSFLG 258
>gi|114327536|ref|YP_744693.1| glutamate racemase [Granulibacter bethesdensis CGDNIH1]
gi|122327492|sp|Q0BTT2|MURI_GRABC RecName: Full=Glutamate racemase
gi|114315710|gb|ABI61770.1| glutamate racemase [Granulibacter bethesdensis CGDNIH1]
Length = 276
Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats.
Identities = 89/270 (32%), Positives = 132/270 (48%), Gaps = 12/270 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K IL+FDSGIGGL V +R ++P YVAD GFPYG D AL R++ +
Sbjct: 1 MRKTDAHILVFDSGIGGLGVADCIRRMLPAATLGYVADTAGFPYGAMSDEALVTRVLTVL 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + +P + VIACNTA TL LRS + F+G VP +K AA+ + + I +L+T
Sbjct: 61 EQAIARLRPDMVVIACNTASTLALSALRSRH-DLPFIGCVPPLKWAASVSATRQIGLLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PAT+ R Y + L+ + C +H + LA E G + + ++ E+ G
Sbjct: 120 PATVDRPYLTALMQEHGQGCTLHAHGARHLAGYAEAVFRGETVLVEAVRAEL-GILGMI- 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D + L CTHY ++ RQ P PV WLD ++++AR+A +
Sbjct: 178 -PDIDAVALGCTHYGRLLPWLRQAMPRPVAWLDPAEAVARQAARIAITAAATAAPDSLPR 236
Query: 249 A-------LFLSGK-PDIAMRRLMQGFGLK 270
A +F +G PD A R+ G
Sbjct: 237 AAPCWAQTVFTTGAVPDEATRQAWAAEGFP 266
>gi|221195778|ref|ZP_03568831.1| glutamate racemase [Atopobium rimae ATCC 49626]
gi|221184252|gb|EEE16646.1| glutamate racemase [Atopobium rimae ATCC 49626]
Length = 284
Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 7/230 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSGIGG+ VL+++ +P FI+ D PYG+ ++ + +D+
Sbjct: 26 VGVFDSGIGGISVLKRLVTELPYERFIFYGDSAHAPYGSKTPQQVQALSGAITDTFVDEG 85
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA LR +P + +G PA+K AA G I +++T TL +
Sbjct: 86 A-KAIVIACNTATAAAAQMLRERYPQLPIVGVEPALKPAALAHSQGRIIVMATARTLSLS 144
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L + + I ++ + +E D ++K I D +
Sbjct: 145 KFLRLEAQWGATSQIIPIAGTGIVELIEAGKANSPQMHDLLEKLIGQY-----RGTVDAV 199
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
VL CTHYP I R + VD+ D A++ LL +
Sbjct: 200 VLGCTHYPFITSQIRAVLG-NVDFYDGGTGAAQQLHRLLKTEDLLAQEPA 248
>gi|242310721|ref|ZP_04809876.1| glutamate racemase [Helicobacter pullorum MIT 98-5489]
gi|239523119|gb|EEQ62985.1| glutamate racemase [Helicobacter pullorum MIT 98-5489]
Length = 253
Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 96/248 (38%), Gaps = 14/248 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ VL+ + IY D PYG + + + +
Sbjct: 4 KKIGVFDSGVGGISVLKSLIDSDSFEEIIYYGDTARVPYGVRSKETIIQYSLEAL-EFFK 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPA 130
++ L V+ACNT D ++ F + +G + A ++ I IL T A
Sbjct: 63 QFNLDLLVVACNTISAYALDSMQ-KFANYPIVGVIEPGVLALTNNLDNKNANILILGTKA 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ NL+H+ +I+ +++ + VEE +I E +K + + +
Sbjct: 122 TINSNLYQNLLHT-QGYTNINGLATSLFVPIVEEGIFEGEILESTMK-----YYFKDYKE 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D I+L CTH+PLI + + ++I + + +
Sbjct: 176 SPDAIILGCTHFPLIAKAIANYYQNKPILIHSGNAIMEYLK---QQYTFQSIKHKTKITF 232
Query: 251 FLSGKPDI 258
+ S D
Sbjct: 233 YASDSLDK 240
>gi|27904976|ref|NP_778102.1| glutamate racemase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|29839498|sp|P59574|MURI_BUCBP RecName: Full=Glutamate racemase
gi|27904374|gb|AAO27207.1| glutamate racemase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 263
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 67/262 (25%), Positives = 126/262 (48%), Gaps = 9/262 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L+N I+IFDS +GGL + ++++ P ++IYV D+ FPYG ++ + KR + + S
Sbjct: 2 NLKNYIIIFDSSLGGLSIYKQIKKKFPYMNYIYVCDNKNFPYGEKDEIFILKRSIKIIST 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
I K +L ++ACNT L++ F + +G +P + +A T++ +I +L T
Sbjct: 62 ITKKITTILVILACNTITVTSLTTLKNFF-NFPIIGVIPNLNKARKITKNNIIGLLGTKI 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ Y N I +V + I L+++ L E+ I IK +E K+
Sbjct: 121 TIHHYYIQNHISLFVPKYKIKLLANNTLVKIAEQKIKNQLISTKNIKFILEPLL--KKHN 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTH+ + +++ P + +D+ I + +L R + +++
Sbjct: 179 MPDTLILGCTHFSFLKEEIKKIFPKKIQIIDSKVHIPKNISTILAR----NLKTTNNNIA 234
Query: 251 FLSGK--PDIAMRRLMQGFGLK 270
F S K + L++ + K
Sbjct: 235 FFSKKIITTKTIHYLLKKYNFK 256
>gi|34496658|ref|NP_900873.1| glutamate racemase [Chromobacterium violaceum ATCC 12472]
gi|34102513|gb|AAQ58878.1| glutamate racemase [Chromobacterium violaceum ATCC 12472]
Length = 256
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 16/256 (6%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
++DSG+GGL V + +R +P++ Y+AD PYG + R + + ++ +
Sbjct: 1 MYDSGLGGLSVWRAVRAALPDWPITYLADQAYCPYGPRSREEIIARALKVGHYLVSQGAT 60
Query: 78 VLSVIACNTAFTLIKDELRSTFP-----SMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+L V + S+ +G PAIK AAA +++G I++L+T TL
Sbjct: 61 LLVV-------ACNTATTAAIAALRAELSLPIVGIEPAIKPAAAMSRTGRIAVLATEYTL 113
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L+ + + + +VE + ++K +E +
Sbjct: 114 ASERVKTLLDDHAGDVDVLRRAGHGWVEQVEAGELSSERTRALVRKVVE----PLIDENI 169
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I L CTHYP + + R+++ + D +++IARR LL R +
Sbjct: 170 DHIALGCTHYPFLAPLIREVTGDGIQLYDPAEAIARRVCDLLRRHGCDSQGDRYYRFITT 229
Query: 253 SGKPDIAMRRLMQGFG 268
S RL Q G
Sbjct: 230 SDDAGEMALRLPQLIG 245
>gi|238917207|ref|YP_002930724.1| glutamate racemase [Eubacterium eligens ATCC 27750]
gi|259509814|sp|C4Z114|MURI_EUBE2 RecName: Full=Glutamate racemase
gi|238872567|gb|ACR72277.1| glutamate racemase [Eubacterium eligens ATCC 27750]
Length = 265
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 8/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL VL + MPE +I+ AD PYG ++K + ++DK
Sbjct: 3 IGIFDSGIGGLSVLHQAMITMPEADYIFYADVDNVPYGEKTREEVRKLVDHAVGFLVDKG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133
V+ACNTA + LR + + +G PA+K A +T + ++STP T +
Sbjct: 63 -CQAIVLACNTATSAAISYLREKYK-LPIIGIEPAVKPAVEHTSETGRRVMVVSTPVTAK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
LI Y + + +V+ L +A ++ ++ F
Sbjct: 121 GEKLKRLIDKYDDKHVVDVVALPKLV----RFAQDDDFDSSDVTDYLKCEFAPYNLNDYS 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+VL CTH+ F +L P ++ +D + ++ +
Sbjct: 177 ELVLGCTHFNYFKDSFAKLFPDDLEMVDGNTGVSNNLKN 215
>gi|329891275|ref|ZP_08269618.1| glutamate racemase [Brevundimonas diminuta ATCC 11568]
gi|328846576|gb|EGF96140.1| glutamate racemase [Brevundimonas diminuta ATCC 11568]
Length = 287
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 57/281 (20%), Positives = 99/281 (35%), Gaps = 30/281 (10%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL V +++ P FIY+ D PYG + + + +
Sbjct: 2 AIGVFDSGVGGLTVHRELTTRFPTRDFIYLGDQAHAPYGGRSGEDIVELTRAGCERLFEA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP---------SMAFLGAV-PAIKQAAAYT------ 118
+ V+ACNTA + L+ T+ + LG + P I+ A
Sbjct: 62 GA-SVVVLACNTASAIALRRLQQTWIPGMREKLGRPVNVLGIIVPTIEAATGLPWSFEAE 120
Query: 119 --------QSGLI---SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167
+ I + T AT I + + LA +E A
Sbjct: 121 RESRMEGEKKQAIDITGVFCTAATAMSRVYEIEIDKRRDDLAVFTEACPGLAGLIELGAP 180
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
++K + ++ + G+ D +L CTHY ++ +F Q P V + ++A
Sbjct: 181 PEELKV-VVDDHVDA-LRRRIGRHPDKAILGCTHYEIVADLFAQALPPGVQVISQPAAVA 238
Query: 228 RRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
R + +G P + Q +G
Sbjct: 239 DSLERYFDRHPEYDLGSSARRDFLTTGTPGPQSDLVAQFWG 279
>gi|89054829|ref|YP_510280.1| glutamate racemase [Jannaschia sp. CCS1]
gi|122498526|sp|Q28PV7|MURI_JANSC RecName: Full=Glutamate racemase
gi|88864378|gb|ABD55255.1| glutamate racemase [Jannaschia sp. CCS1]
Length = 270
Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 94/263 (35%), Gaps = 20/263 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ IY+ D+ PYG E + + D+
Sbjct: 2 AVGIFDSGLGGLTVLDAVTKALPDVPLIYMGDNAHTPYGVREADDIYDLTTAGVQHLFDR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ + LG + +A Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQEGWVPEGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TP T+ + + + +E+ + + E ++ ++
Sbjct: 121 EVALFATPTTVSSRAFQRELAFRAIGVDVEAQPCGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ VFR V +A L R
Sbjct: 179 A--LKRRMPNPQAAILGCTHYPLVEDVFRAALGDGVAVFSQPSLVADSLGDYLKRRPEML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLM 264
A +G P +
Sbjct: 237 GSGEP--AFLTTGDPKSVEAKAT 257
>gi|297622727|ref|YP_003704161.1| glutamate racemase [Truepera radiovictrix DSM 17093]
gi|297163907|gb|ADI13618.1| glutamate racemase [Truepera radiovictrix DSM 17093]
Length = 270
Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 13/250 (5%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + +FDSG+GGL VL +R L+P HF+YV D PYG+ ++ +
Sbjct: 1 MKTPPHAPLGVFDSGVGGLTVLAALRALLPAEHFLYVGDTARVPYGSKPLEMVRAFAAEI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ +L + V+ACNTA L + P + G + P ++ A G I +L
Sbjct: 61 CALLLSRGVKG-IVVACNTASAAALPGLAAELP-VPVWGVIAPGVQAALRRAPGGRIGVL 118
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+R + + C + + VEE + + I + + ++
Sbjct: 119 GTAGTIRTGAYQRPLE--AAGCRVWARPCPLFVPIVEEG-----VSDTVIARLVAEHYL- 170
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
K+ D +L CTHYP + + ++ P LD+++ AR L +
Sbjct: 171 KDAPALDAAILGCTHYPALKGILSEVLP-GTALLDSAEETARVVAHDLALLGLANPNAAP 229
Query: 247 DH-ALFLSGK 255
++G
Sbjct: 230 GTVRHLVTGD 239
>gi|255321691|ref|ZP_05362846.1| glutamate racemase [Campylobacter showae RM3277]
gi|255301171|gb|EET80433.1| glutamate racemase [Campylobacter showae RM3277]
Length = 327
Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats.
Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 10/232 (4%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N +K L+ I FDSGIGGL VL + F+Y AD+ PYG + +
Sbjct: 8 NLTLDKDLK--IAFFDSGIGGLSVLAEALRRFSGAEFLYFADEDHVPYGTKSRAEIVRLS 65
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ ++ + V+ACNTA + ELR F S+ +G PA+K AA +
Sbjct: 66 LDAVGFLVSRGA-DGVVVACNTATSAAISELRGAF-SVPVIGMEPAVKLAADSFGARPTL 123
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+++TP T+ + L+ +C + L E+A ++ ++ +
Sbjct: 124 LIATPLTIAGEKLARLVGRL--ECETWSLPLPRLV----EFAQDLEFDSPAVRAYLREEL 177
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ E +R +VL CTH+ V R++ P V +D D R L
Sbjct: 178 AKFELERLGSLVLGCTHFNYFKDVLREILPSHVRIIDGIDGTLNRLASELGE 229
>gi|227514545|ref|ZP_03944594.1| glutamate racemase [Lactobacillus fermentum ATCC 14931]
gi|227087102|gb|EEI22414.1| glutamate racemase [Lactobacillus fermentum ATCC 14931]
Length = 268
Score = 220 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 16/258 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V++ ++ +P I+V D FPYG + +++
Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGTKDQAEVRQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + + +L K+ + V+ACNTA L++ P + +G + P + A A + G
Sbjct: 53 LALSIGAFLL-KHDVKMMVVACNTATAAALPALQAVLP-IPVIGVIEPGARAALAQDKKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT I + ++ + VE G ++ + +++
Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIVEHGQTGTAKAQEVVSEQLM 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ +++ CTH+P + + V +D + A+ L +
Sbjct: 171 T----FKEHPVKTLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226
Query: 242 TRVFDDHALFLSGK-PDI 258
++ L+ +G PD+
Sbjct: 227 NHAHPNYHLYSTGNLPDL 244
>gi|311087439|gb|ADP67519.1| glutamate racemase [Buchnera aphidicola str. JF99 (Acyrthosiphon
pisum)]
gi|311087930|gb|ADP68009.1| glutamate racemase [Buchnera aphidicola str. JF98 (Acyrthosiphon
pisum)]
Length = 262
Score = 220 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 5/227 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y
Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T +I+ Y I ++ + LA E+ G+ + + ++K D I+
Sbjct: 121 TQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWI--NLPTCPDTII 178
Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241
L CTH+ L+ + + V ++D+ + + + L N +Q
Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSYLKTSNVNQ 225
>gi|148239373|ref|YP_001224760.1| glutamate racemase [Synechococcus sp. WH 7803]
gi|147847912|emb|CAK23463.1| Glutamate racemase [Synechococcus sp. WH 7803]
Length = 268
Score = 220 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 16/257 (6%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
FDSG+GGL VL+++ IY+ D PYG+ ++ + + + D+ Q
Sbjct: 6 GFFDSGLGGLTVLRRVLESHGGVPTIYLGDTARVPYGSRSPSEIRAIASEVVAWLRDQ-Q 64
Query: 77 PVLSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNT L +D E ++ P + +G AAA + + +L+TPAT+
Sbjct: 65 VTTVVMACNTTNALARDVTEGQAGVPVVGLIG------AAAAMVRDSRVGVLATPATVAS 118
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I + + + +E G D ++
Sbjct: 119 GAYRESIEALHPGTLVVQQACPDFVPLIEAGDLGC----DALRSAAIHYLQPLLEASVQS 174
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALF 251
IVL CTHYPL++ + L P + +D + +A + LL + Q + +
Sbjct: 175 IVLGCTHYPLLLPLLSNLLPESIRLIDPALGVASQLDALLGKPVPGGLDQPLALEATRIC 234
Query: 252 LSGKPDIAMRRLMQGFG 268
++ P R G
Sbjct: 235 VTSDPQGFADRSTPWLG 251
>gi|297568262|ref|YP_003689606.1| glutamate racemase [Desulfurivibrio alkaliphilus AHT2]
gi|296924177|gb|ADH84987.1| glutamate racemase [Desulfurivibrio alkaliphilus AHT2]
Length = 267
Score = 220 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V + + +P+Y +Y D PYG+ + + +L +
Sbjct: 2 IGVFDSGVGGMTVARAIEQALPDYRLVYFGDLARTPYGSKSSDTISRYSCQNVDFLLSRG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACN+A ++ LR+ + F PA+ QAA ++ G + ++ T AT+R
Sbjct: 62 A-KIIVVACNSAASVAAANLRAAYDLPIFEVIGPAVAQAARFSSRGRVGVIGTRATIRSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ + C + + +L VEE + + E K + + ++ D +
Sbjct: 121 VYEQLLQQQNAGCRVFSAACPLLVPLVEEGW----LDKRETKMILRRYLAPLKQQQVDTL 176
Query: 196 VLACTHYPLIVHVFR 210
VL CTHYPL+ + +
Sbjct: 177 VLGCTHYPLLKELIQ 191
>gi|262341174|ref|YP_003284029.1| glutamate racemase [Blattabacterium sp. (Blattella germanica) str.
Bge]
gi|262272511|gb|ACY40419.1| glutamate racemase [Blattabacterium sp. (Blattella germanica) str.
Bge]
Length = 269
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 15/260 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSGIGGL++ ++++ MP IY D PYG + + M + S +
Sbjct: 7 SPIGIFDSGIGGLLIAKEIKIQMPNEDLIYFGDTRNMPYGEKSKEFIIENSMKIASFLYK 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K L VIACN+ + D L TF + + I + S I I++TPAT+
Sbjct: 67 KKCKAL-VIACNSITSNALDILCKTFHRKILIFNVIDPIVKHKILLSSKRIGIIATPATI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + I Y I +S+ +LA +E+ G KIK++ I + K
Sbjct: 126 RSNFYTKEIKKYYHHLDIVQISTSLLAPMIEK---GFKIKKNIINNYLNRL------KSI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL-- 250
D ++LACTHY + V +D + + + L +
Sbjct: 177 DTLLLACTHYLFLKQEIDNFYHGKVRLIDIQKIVVQEIKKTLNDDKLLCNHPTWNRKFPI 236
Query: 251 FLSGK--PDIAMRRLMQGFG 268
F + P +++ FG
Sbjct: 237 FYTSSLIPTFFEKQVRILFG 256
>gi|219681899|ref|YP_002468285.1| glutamate racemase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|257471604|ref|ZP_05635603.1| glutamate racemase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
pisum)]
gi|254766110|sp|B8D9X6|MURI_BUCA5 RecName: Full=Glutamate racemase
gi|219624742|gb|ACL30897.1| glutamate racemase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
Length = 262
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 5/227 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y
Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T I+ Y I ++ + LA E+ G+ + + ++K D I+
Sbjct: 121 TQKTIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWI--NLPTCPDTII 178
Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241
L CTH+ L+ + + V ++D+ + + + L N +Q
Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSYLKTSNVNQ 225
>gi|87124213|ref|ZP_01080062.1| Glutamate racemase [Synechococcus sp. RS9917]
gi|86167785|gb|EAQ69043.1| Glutamate racemase [Synechococcus sp. RS9917]
Length = 262
Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 99/255 (38%), Gaps = 12/255 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+ + +Y+ D PYG+ ++ + + L Q
Sbjct: 6 GLFDSGVGGLTVLRSVLHRHGPVPCVYLGDTARVPYGSRAPSEIRSIAAEVVA-WLRSQQ 64
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L ++ + +G + A AAA + + +L+TPAT+
Sbjct: 65 VSTVVMACNTTNALA-RDVAEGQAGVPVVGLIGA---AAALVRESRVGVLATPATVASGA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I + + + R+E + +++ + ++
Sbjct: 121 YRESIEALHPGSLVVQQACPEFVPRIEAG----DLSSPALRQIAQLYLTPLLEASVQSVI 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFLS 253
L CTHYPL+ + + L P V +D ++ +AR+ LL Q L ++
Sbjct: 177 LGCTHYPLLQPLLQSLLPPDVRLIDPAEGVARQLDALLGTPREGRPDQPLSLATTRLCVT 236
Query: 254 GKPDIAMRRLMQGFG 268
P+ R G
Sbjct: 237 ADPEGFACRATPWLG 251
>gi|325474017|gb|EGC77205.1| glutamate racemase [Treponema denticola F0402]
Length = 271
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 8/250 (3%)
Query: 18 IF-DSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+F DSGIGGL L+ ++ L P+ YVAD FPYG + + L I++K +
Sbjct: 10 VFIDSGIGGLPYLRHLKELEPQSSCAYVADTKHFPYGEKTLEEVIEYTEDLVKKIIEKLK 69
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + +IACNT LR F + F+G VPAIK AA +++ I++L+T T+ Y
Sbjct: 70 PSVIIIACNTMTVSALSHLRKKF-EIPFVGTVPAIKPAALTSKNKKIAVLATERTVNDIY 128
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
NLI + + C + + +L S++E E++ K I + TD V
Sbjct: 129 VQNLIEEFGADCKFFMRADSVLVSKIENTLLSG--SEEDKKAGIRPAVEFFKSAGTDTAV 186
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA----LFL 252
L CTH+ + F+ + +D+ D + +A + P + ++
Sbjct: 187 LGCTHFLHLRDEFKSECEPDIKIVDSLDGVVNQALKISPPQKSKTDEKLNNIQKDIFYIT 246
Query: 253 SGKPDIAMRR 262
S K + + ++
Sbjct: 247 SEKTEESEKK 256
>gi|212697494|ref|ZP_03305622.1| hypothetical protein ANHYDRO_02064 [Anaerococcus hydrogenalis DSM
7454]
gi|212675493|gb|EEB35100.1| hypothetical protein ANHYDRO_02064 [Anaerococcus hydrogenalis DSM
7454]
Length = 249
Score = 219 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 9/216 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL VL+++ + ++ Y+ D+ PYGN + + K + ++ K
Sbjct: 3 NIGVFDSGLGGLTVLRELSKKH-KANYFYLGDNKNVPYGNRSNEEIIKLSKDIVRFLIKK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNT + ELR F IK+A ++G + +++T AT +
Sbjct: 62 -DIDFFVIACNTISVVAIKELRKEFDKKFISITDEGIKEA--LNRNGDVFVMATKATCKN 118
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+I S+ ++ S L +EE + ++I +++ K+ +
Sbjct: 119 HAYKKIIEGRSSK-KVYEKSCPKLVDYIEEGI----LSGEKIDSQLKDYLTLANEKKIEN 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
I+L CTHYP+I + + + +D + +AR
Sbjct: 174 IILGCTHYPIIKKTIEKNLTYKANIIDPAKVLARDI 209
>gi|325847040|ref|ZP_08169866.1| glutamate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481012|gb|EGC84057.1| glutamate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 248
Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 9/216 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL VL+++ + ++ Y+ D+ PYGN + + K + ++ K
Sbjct: 3 NIGVFDSGLGGLTVLRELSKKH-KANYFYLGDNKNVPYGNKSNEEIIKLSKDIVKFLIKK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNT + ELR F IK+A ++G + +++T AT +
Sbjct: 62 -DIDFFVIACNTISVVAIKELREEFDKKFISITDEGIKEA--LNKNGDVFVMATKATCKN 118
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+I S+ ++ S L +EE + ++I +++ K+ +
Sbjct: 119 HAYKKIIEGRSSK-KVYEESCPKLVDYIEEGI----LSGEKIDSQLKDYLTIANEKKIEN 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
I+L CTHYP+I + + + +D + +AR
Sbjct: 174 IILGCTHYPIIKKTIEKNLTYKANIIDPAKVLARDI 209
>gi|307637232|gb|ADN79682.1| glutamate racemase [Helicobacter pylori 908]
gi|325995823|gb|ADZ51228.1| Glutamate racemase [Helicobacter pylori 2018]
gi|325997417|gb|ADZ49625.1| Glutamate racemase [Helicobacter pylori 2017]
Length = 255
Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|282852140|ref|ZP_06261497.1| glutamate racemase [Lactobacillus gasseri 224-1]
gi|282556704|gb|EFB62309.1| glutamate racemase [Lactobacillus gasseri 224-1]
Length = 241
Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 80/232 (34%), Gaps = 7/232 (3%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MP I++ D PYG+ + + +L K + + CNTA + +
Sbjct: 1 MPNESTIFIGDQANMPYGDRSKEEIISLTRDSVNFLLSK-DVKIIIFGCNTATAVAMSTI 59
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
+ P AA T++ ++++ T AT+ I + + +
Sbjct: 60 KKEIPLQIIGVVQSGALAAARTTETKNVAVIGTKATVNSHSYLKEIQYRDPKIQVSEFAQ 119
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
LA EE E+ + + + D +VL CTHYPL+ +
Sbjct: 120 PKLAPLAEE-----DPAEEIKQAVVSESLAPLKKADYDTLVLGCTHYPLLRKEIVAVVGQ 174
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLMQG 266
+D +D +A+ +L R D H + +G+ Q
Sbjct: 175 DRKIVDPADQVAQYTYNVLRRDGLFAAGNSDTKHEYYTTGEAKKFTEITRQW 226
>gi|28210023|ref|NP_780967.1| glutamate racemase [Clostridium tetani E88]
gi|28202458|gb|AAO34904.1| glutamate racemase [Clostridium tetani E88]
Length = 266
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 55/247 (22%), Positives = 107/247 (43%), Gaps = 11/247 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL +++++ L+P + Y D+ PYGN + + + ++
Sbjct: 11 DSVIGVLDSGVGGLTTVKELQELLPNENIYYFGDNKNVPYGNKTQEEIIQFTRNMIEFLV 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V++V ACNT T+ D++ + P + + + +++T T+
Sbjct: 71 SQNVKVIAV-ACNTISTI-IDKISGDYDVKIIKVIDPIVNNIKNIQKKHKVGLIATSFTI 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y ++ + S LA+ V+ K +D IK IE K +
Sbjct: 129 STKYYDEML----GDVKVIGKGSPELAAIVDSGEINEKEVKDIIKVHIEDI---KSRENV 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251
D I+L CTHYP+I H F + P +++L+ + + L +N + + +F
Sbjct: 182 DTIILGCTHYPIIKHFFDECYP-DINFLNPAHQHVIAVKEYLEEMNLLREDNNNKFFKIF 240
Query: 252 LSGKPDI 258
+G +
Sbjct: 241 TTGDKEK 247
>gi|315499265|ref|YP_004088069.1| glutamate racemase [Asticcacaulis excentricus CB 48]
gi|315417277|gb|ADU13918.1| Glutamate racemase [Asticcacaulis excentricus CB 48]
Length = 284
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 104/277 (37%), Gaps = 26/277 (9%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL + + + MP FIY+ D PYG + + + +
Sbjct: 3 AIGVFDSGVGGLSIHRALVDRMPGADFIYLGDQKHAPYGERSGEEIVELTRQGCETLFNA 62
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF---------PSMAFLGAV-PAIKQA---------- 114
+ V+ CNTA + L+ST+ + LG + P I+ A
Sbjct: 63 GA-SIVVLGCNTASAVALRRLQSTWLADYRKSIGRPVNVLGIIVPTIEAATGLPWEHEAE 121
Query: 115 ---AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
A ++ I T AT R I + + LA+ +E K+
Sbjct: 122 RRGAKIENVDVLGIFCTTATARSRVYEIEIDKRRQDLAVFTEPCIGLAAMIEAGESEEKL 181
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
++ ++ + G+ D +L CTHY +I +F+ P + S+A
Sbjct: 182 T-AVVESRVQA-LKTRIGRYPDRAILGCTHYEIIGELFKAALPEGTPLIHQPSSVANALE 239
Query: 232 CLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ R + +HA +G P + + +G
Sbjct: 240 SYIARHPEYAIGTSANHAFLTTGVPGLQSEIVAAFWG 276
>gi|320537123|ref|ZP_08037095.1| glutamate racemase [Treponema phagedenis F0421]
gi|320145996|gb|EFW37640.1| glutamate racemase [Treponema phagedenis F0421]
Length = 267
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 6/242 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
DSG GGL LQ + L P+ +YVAD+ FPYG + + ++ ++
Sbjct: 11 AFIDSGTGGLPYLQYLHELEPDASMVYVADNAHFPYGKKTKEEVIAFASEMVEKLIARFN 70
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + ++ACNT + D LR F ++ F+G VP IK A +++ I IL+T T+ Y
Sbjct: 71 PEIIIVACNTMSVMALDSLRKKF-TLPFVGTVPGIKLAVKQSRNKRIGILATERTVCDPY 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + S C+ + L +++E+ I +E K I+ + + TD I+
Sbjct: 130 TERLIEEFGSGCYFEKRADQELIAQIEDGL--ITASYEEKLKAIQPALEQFKKANTDSII 187
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
LACTH+ I VF + + +D + +A + P + ++ + +
Sbjct: 188 LACTHFLHIEDVFESAAGSDMQIIDTRSGVIHQALRIAP---CKKNPDAPPNSCYATAAL 244
Query: 257 DI 258
D
Sbjct: 245 DT 246
>gi|42526956|ref|NP_972054.1| glutamate racemase, putative [Treponema denticola ATCC 35405]
gi|41817271|gb|AAS11965.1| glutamate racemase, putative [Treponema denticola ATCC 35405]
Length = 271
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 8/250 (3%)
Query: 18 IF-DSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+F DSGIGGL L+ ++ L P+ YVAD FPYG + + L I++K +
Sbjct: 10 VFIDSGIGGLPYLRHLKELEPQSSCAYVADTKHFPYGEKTLEDVIEYTEDLVKKIIEKLK 69
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + +IACNT LR F + F+G VPAIK AA +++ I++L+T T+ Y
Sbjct: 70 PSVIIIACNTMTVSALSHLRKKF-EIPFVGTVPAIKPAALTSKNKKIAVLATERTVNDIY 128
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
NLI + + C + + +L S++E E++ K I + TD V
Sbjct: 129 VQNLIEEFGADCKFFMRADSVLVSKIENTLLSG--SEEDKKAGIRPAVEFFKSAGTDTAV 186
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA----LFL 252
L CTH+ + F+ + +D+ D + +A + P + +
Sbjct: 187 LGCTHFLHLRDEFKSECEPDIKIVDSLDGVVNQALKISPPQKSKTDEKLKNIQKDIFYIT 246
Query: 253 SGKPDIAMRR 262
S K + + ++
Sbjct: 247 SEKTEESTKK 256
>gi|219682454|ref|YP_002468838.1| glutamate racemase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|254766111|sp|B8D878|MURI_BUCAT RecName: Full=Glutamate racemase
gi|219622187|gb|ACL30343.1| glutamate racemase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|311086275|gb|ADP66357.1| glutamate racemase [Buchnera aphidicola str. LL01 (Acyrthosiphon
pisum)]
Length = 262
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 5/227 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y
Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T +I+ Y I ++ + LA E+ G+ + + ++K D I+
Sbjct: 121 TQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWI--NLPTCPDTII 178
Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241
L CTH+ L+ + + V ++D+ + + + L N +Q
Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSCLKTSNVNQ 225
>gi|184155007|ref|YP_001843347.1| glutamate racemase [Lactobacillus fermentum IFO 3956]
gi|417584|sp|Q03469|MURI_LACFE RecName: Full=Glutamate racemase
gi|229486241|sp|B2GB35|MURI_LACF3 RecName: Full=Glutamate racemase
gi|149549|gb|AAA25241.1| glutamate racemase [Lactobacillus fermentum]
gi|183226351|dbj|BAG26867.1| glutamate racemase [Lactobacillus fermentum IFO 3956]
Length = 268
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 107/258 (41%), Gaps = 16/258 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V++ ++ +P I+V D FPYG + +++
Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGTKDQAEVRQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + + +L K+ + V+ACNTA T + +G + P + A A + G
Sbjct: 53 LALSIGAFLL-KHDVKMMVVACNTA-TAAALPALQAALPIPVIGVIEPGARAALAQDKKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT I + ++ + VE G ++ + +++
Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIVEHGQTGTAKAQEVVSEQLM 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ +++ CTH+P + + V +D + A+ L +
Sbjct: 171 T----FKEHPVKTLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226
Query: 242 TRVFDDHALFLSGK-PDI 258
++ L+ +G PD+
Sbjct: 227 NHAHPNYHLYSTGNLPDL 244
>gi|78777751|ref|YP_394066.1| glutamate racemase [Sulfurimonas denitrificans DSM 1251]
gi|78498291|gb|ABB44831.1| glutamate racemase [Sulfurimonas denitrificans DSM 1251]
Length = 247
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 15/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSGIGGL V++ + IY D PYG + + + + + +
Sbjct: 3 VGVFDSGIGGLTVVKSLLENKLFEEIIYFGDTARVPYGIKDKSTIIRYAIEAV-EFFKNF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132
+ L ++ACNT E+R S +G V A A A ++ I IL T AT+
Sbjct: 62 ELDLIIVACNTVSAHALSEMREA-SSCPVIGVVEAGILATANALKDKNSNILILGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+++ ++ ++ + VEE +I + +K + ++
Sbjct: 121 NSKAYEIGLNAE-GFKNLQAKATGLFVPIVEEEIYSGEILDATMKHYFKEI------QKP 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTH+PLI + + + D+I R + F
Sbjct: 174 DAIILGCTHFPLISDALQSYFSKESILIHSGDAIVEYLE---KRFEFSKKYKETKLEFFA 230
Query: 253 SGKPDIAMRRLMQGFGL 269
S P+ + +
Sbjct: 231 SESPEALKNISKKWLNI 247
>gi|33861174|ref|NP_892735.1| putative aspartate and glutamate racemase:glutamate racemase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33639906|emb|CAE19076.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 264
Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 11/258 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I IFDSGIGG +L + + Y+AD PYGN ++ + +
Sbjct: 1 MKLKIGIFDSGIGGFTILSALMKTREDIEVFYLADTKRVPYGNKNIEQIRFIAKDICNWF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
DK VL IACNT D L + + I + I +L+TPAT
Sbjct: 61 KDKNLDVLL-IACNTTNACALDILENNLQ----IPCFDLINSVSEIVTKKYIGVLATPAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +Y +I S + + +E+ + +++ + +
Sbjct: 116 IKTSYYKKIIESKRENVQVFQQACPEFVPEIEK----TNLDLNKLNYLSDLYINPLLKEN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ I+L C+HYPLI +V + + +D S ++ L+P+ ++++ D+
Sbjct: 172 IEEIILGCSHYPLIYNVLKSKVHSNIRIIDPSAALVNNFNNSFLIPKNYSYESTSSDNIK 231
Query: 250 LFLSGKPDIAMRRLMQGF 267
F++ + +++
Sbjct: 232 FFVTQNSEDFSKKVKYWL 249
>gi|113954148|ref|YP_730755.1| glutamate racemase [Synechococcus sp. CC9311]
gi|113881499|gb|ABI46457.1| glutamate racemase [Synechococcus sp. CC9311]
Length = 263
Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 103/257 (40%), Gaps = 16/257 (6%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSGIGGL VL+++ Y+ D PYG+ ++ + + L Q
Sbjct: 6 GLFDSGIGGLTVLRRILERHGAVPVTYLGDTARVPYGSRSPSEIRSIAAEVVA-WLRAQQ 64
Query: 77 PVLSVIACNTAFTLIKD--ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNT L +D E ++ P + +G AAA + + +L+TPAT+
Sbjct: 65 VSTVVMACNTTNALARDVTEGQAGVPVVGLIG------AAAALVKESRVGVLATPATVAS 118
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I + + + +E ++ DE+++ D
Sbjct: 119 GAYRESIEALHPGTLVVQQACPDFVPLIEAG----DLRSDELREAAIRYLQPLLEASVDS 174
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALF 251
+VL CTHYPL+V + L P + +D + ++A + L + + +Q + L
Sbjct: 175 VVLGCTHYPLLVPLLANLLPSHMRLIDPAVAVATQLDAFLGQPLPGSQNQPVSLEAAHLC 234
Query: 252 LSGKPDIAMRRLMQGFG 268
++ R G
Sbjct: 235 VTKDAQGFAERATAWLG 251
>gi|226326749|ref|ZP_03802267.1| hypothetical protein PROPEN_00609 [Proteus penneri ATCC 35198]
gi|225204586|gb|EEG86940.1| hypothetical protein PROPEN_00609 [Proteus penneri ATCC 35198]
Length = 206
Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 3/200 (1%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K+ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+T AT+
Sbjct: 3 EKHFLAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLATRATV 62
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI + + C +H + S L E G ++ D ++K + KE
Sbjct: 63 KRPYTHELIERFATDCKVHSLGSAELVELAERKLHGEEVSLDALRKILTPWLKMKEP--P 120
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ + P +D+ +IARR L+ + A L
Sbjct: 121 DTVVLGCTHFPLLADELLSVLPDGTRIIDSGAAIARRTAWLVVNQAKIKGSNEISFAYCL 180
Query: 253 S-GKPDIAMRRLMQGFGLKS 271
+ ++ ++ GFG +S
Sbjct: 181 KEDENSELLKPVLAGFGFES 200
>gi|127663966|gb|ABO28671.1| glutamate recemase [Helicobacter pylori]
Length = 255
Score = 217 bits (555), Expect = 9e-55, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYSLRENACTFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWVEKQAKEWL 253
>gi|329847625|ref|ZP_08262653.1| asp/Glu/Hydantoin racemase family protein [Asticcacaulis
biprosthecum C19]
gi|328842688|gb|EGF92257.1| asp/Glu/Hydantoin racemase family protein [Asticcacaulis
biprosthecum C19]
Length = 284
Score = 217 bits (555), Expect = 9e-55, Method: Composition-based stats.
Identities = 61/277 (22%), Positives = 106/277 (38%), Gaps = 26/277 (9%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL + + +P+ FIY+AD PYG+ + + + +
Sbjct: 2 AMGVFDSGVGGLSIHHALVNRLPQADFIYLADQKHTPYGDRSGEEIVELTRQGCETLFEA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPS---------MAFLGAV-PAIKQAA--------- 115
L V+ACNTA + L+ T+ S + LG + P I+ A
Sbjct: 62 GA-SLVVLACNTASAVALRRLQQTWLSGFRKTYKRPVNVLGIIVPTIEAATGLPWEHEAE 120
Query: 116 ----AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ ++ + +T AT R I + + LA +E+ A
Sbjct: 121 RRGEKIEKLDIVGVFATVATARSRVYEIEIDKRRQDIAVFTEACSGLADMIEKGA-DRDS 179
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+IK +E + G+ D +L CTHY L+ +FRQ P + S+A+
Sbjct: 180 LSAKIKGHVES-LRIRVGRYPDRAILGCTHYELVADLFRQHLPAGTPIIHQPPSVAKAMG 238
Query: 232 CLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ R + +G P + +G
Sbjct: 239 DYVERHTKYDIGSSGARTFLTTGTPGSQSALIEAFWG 275
>gi|311086850|gb|ADP66931.1| glutamate racemase [Buchnera aphidicola str. TLW03 (Acyrthosiphon
pisum)]
Length = 262
Score = 217 bits (555), Expect = 9e-55, Method: Composition-based stats.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 5/227 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y
Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T +I+ Y I ++ + LA E+ G+ + + ++K D I+
Sbjct: 121 TQKIIYEYSYSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWI--NLPTCPDTII 178
Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241
L CTH+ L+ + + V ++D+ + + + L N +Q
Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSCLKTSNVNQ 225
>gi|330718035|ref|ZP_08312635.1| glutamate racemase [Leuconostoc fallax KCTC 3537]
Length = 238
Score = 217 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 8/226 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GG+ L+ + ++P FI+ D + PYG+ + + +L
Sbjct: 4 KQPIGVFDSGVGGISTLRVLTQMLPNEDFIFFGDSLHAPYGSKTAGQVVDLSQKVVDTLL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + K L +P++ +G PA+K+A I +L T TL
Sbjct: 64 AQ-NVKAIVIACNTATSSAKPWLVDHYPNVPIIGIEPALKEAVDDGHQD-ILVLGTALTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ Y HI ++ LA +E+ + +IK + F + + +
Sbjct: 122 SLPKFQTQLDQYQENHHITVLPCPGLADLIEQGDKRLT----DIKALLIDLFKDIQNRSF 177
Query: 193 DVIVLACTHYPLIVHVFRQLSP--WPVDWLDNSDSIARRARCLLPR 236
+VL CTHYP I + + + + I R+ L +
Sbjct: 178 SAVVLGCTHYPFIQPLIETYLAQKNNIKFYTGYEGIGRQLIRTLEQ 223
>gi|127663934|gb|ABO28649.1| glutamate recemase [Helicobacter pylori]
Length = 255
Score = 217 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALRKNACTFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|260663402|ref|ZP_05864293.1| glutamate racemase [Lactobacillus fermentum 28-3-CHN]
gi|260552254|gb|EEX25306.1| glutamate racemase [Lactobacillus fermentum 28-3-CHN]
Length = 268
Score = 217 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 107/258 (41%), Gaps = 16/258 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I + DSG+GGL V++ ++ +P I+V D FPYG + +++
Sbjct: 1 MDNRP--------IGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGTKDQAEVRQ 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + + +L K+ + V+ACNTA T + +G + P + A A + G
Sbjct: 53 LALSIGAFLL-KHDVKMMVVACNTA-TAAALPALQAALPIPVIGVIEPGARAALAQDKKG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT I + ++ + VE + + + ++ +
Sbjct: 111 PIGVIATTATTTAGAYPATIERLAPGTPVIAKATQPMVEIVEHG----QTETAKAQEVVS 166
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + +++ CTH+P + + V +D + A+ L +
Sbjct: 167 EQLMTFKEHPVKTLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMG 226
Query: 242 TRVFDDHALFLSGK-PDI 258
++ L+ +G PD+
Sbjct: 227 NHAHPNYHLYSTGNLPDL 244
>gi|217032399|ref|ZP_03437894.1| hypothetical protein HPB128_25g47 [Helicobacter pylori B128]
gi|298736238|ref|YP_003728764.1| glutamate racemase [Helicobacter pylori B8]
gi|216945966|gb|EEC24582.1| hypothetical protein HPB128_25g47 [Helicobacter pylori B128]
gi|298355428|emb|CBI66300.1| glutamate racemase [Helicobacter pylori B8]
Length = 255
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMDHFALSTPPLLIHSGDAIVEYLQQ--KYTLKKNAHAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|210134751|ref|YP_002301190.1| glutamate racemase [Helicobacter pylori P12]
gi|226707586|sp|B6JLD2|MURI_HELP2 RecName: Full=Glutamate racemase
gi|210132719|gb|ACJ07710.1| glutamate racemase [Helicobacter pylori P12]
Length = 255
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVGYLQQ--KYALKKNAHAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|88808406|ref|ZP_01123916.1| Glutamate racemase [Synechococcus sp. WH 7805]
gi|88787394|gb|EAR18551.1| Glutamate racemase [Synechococcus sp. WH 7805]
Length = 268
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 99/255 (38%), Gaps = 12/255 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+++ IY+ D PYG+ ++ + + L +
Sbjct: 6 GLFDSGLGGLTVLRRVLERHGAVPTIYLGDTARVPYGSRSPSEIRVIASEVVA-WLRHQK 64
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L +D + +G + A AAA + + +L+TPAT+
Sbjct: 65 VTTVVMACNTTNALARDVAEGKA-GVPVVGLIGA---AAAMVRESRVGVLATPATVASGA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ I + + + +E + DE+ + IV
Sbjct: 121 YRDSIEALHPGTLVVQQACPDFVPLIEAG----DLNCDELYRAAIRYLQPLLEASVQSIV 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALFLS 253
L CTHYPL++ + L P + +D + +A + LL + Q ++++
Sbjct: 177 LGCTHYPLLLPLLSNLLPESIRLIDPALGVASQLDVLLGQPLPGGLDQPLALGATHIYVT 236
Query: 254 GKPDIAMRRLMQGFG 268
P R G
Sbjct: 237 SDPQGFADRATPWLG 251
>gi|166030602|ref|ZP_02233431.1| hypothetical protein DORFOR_00268 [Dorea formicigenerans ATCC
27755]
gi|166029604|gb|EDR48361.1| hypothetical protein DORFOR_00268 [Dorea formicigenerans ATCC
27755]
Length = 272
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 115/253 (45%), Gaps = 19/253 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL + ++PE F+Y AD+ PYG ++ + + + ++ K
Sbjct: 3 IGIFDSGMGGLSVLHRALRMIPEADFLYYADEEHVPYGEKTREQVRGYIDEIIAFMIKK- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATLR 133
Q VIACNTA ++ E RS FP + +G PA+K+A + G I + +TP T++
Sbjct: 62 QVDAIVIACNTATSVATKEYRSQFP-LPIVGMEPAVKKAVEEYADRPGRILVAATPITIQ 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+L+ + + LV+ L E+ +D++ ++ + +
Sbjct: 121 GDKLHHLVDRVDKRDMVDLVALPKLVRFAEQ----EIFDQDQVVPYLKEALKDYPLEEYK 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-----------INTHQT 242
VL CTH+ ++++ P ++++D ++ R + + + +
Sbjct: 177 AFVLGCTHFNYFKESYQEIFPNKIEFVDGNEGALRELIRRMEKECDTISVKNGANDAEEF 236
Query: 243 RVFDDHALFLSGK 255
D + SGK
Sbjct: 237 SKTDRVTYYFSGK 249
>gi|127663884|gb|ABO28624.1| glutamate recemase [Helicobacter pylori 908]
Length = 255
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--NYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|308184333|ref|YP_003928466.1| glutamate racemase [Helicobacter pylori SJM180]
gi|308060253|gb|ADO02149.1| glutamate racemase [Helicobacter pylori SJM180]
Length = 255
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|15617147|ref|NP_240360.1| glutamate racemase [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|11386924|sp|P57619|MURI_BUCAI RecName: Full=Glutamate racemase
gi|25291667|pir||F84994 glutamate racemase (EC 5.1.1.3) [imported] - Buchnera sp. (strain
APS)
gi|10039212|dbj|BAB13246.1| glutamate racemase [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
Length = 262
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 5/227 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y
Sbjct: 62 INVVVIACNTISTVALSILRKKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T +I+ Y I ++ + LA E+ G+ + + ++K D I+
Sbjct: 121 TQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWI--NLPTCPDTII 178
Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQ 241
L CTH+ L+ + + V ++D+ + + L N +Q
Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIESYLKTSNVNQ 225
>gi|78779002|ref|YP_397114.1| glutamate racemase [Prochlorococcus marinus str. MIT 9312]
gi|78712501|gb|ABB49678.1| glutamate racemase [Prochlorococcus marinus str. MIT 9312]
Length = 264
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I IFDSGIGG +L + + Y+AD P+G+ ++ + +
Sbjct: 1 MKLKIGIFDSGIGGFTILNSLLKTRNDVEVFYLADTKRIPFGDKNFEEIRLIAKEICNFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
DK L IACNT D L + + I + +I IL+T T
Sbjct: 61 EDKNLDALL-IACNTTNACALDILENDLK----IPCFDLINSVSEIVNKQIIGILATKTT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y N I S I S +E K+ ++ + K
Sbjct: 116 VRSSYYKNAISSKKENSKIFQNECPEFVSEIER----EKLDFIKLNNLSDLYLKPLLNKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ I+L C+HYPLI R+ + +D S+++ ++ +P+ + +++ F++
Sbjct: 172 IEEIILGCSHYPLIYEFLRKKISSNIKIIDPSEALIKKFNESFAIPKTDRYESLSFENVK 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F++ + D +++ G+
Sbjct: 232 FFVTSERDKFSKKVKFWLGIN 252
>gi|295698712|ref|YP_003603367.1| glutamate racemase [Candidatus Riesia pediculicola USDA]
gi|291157340|gb|ADD79785.1| glutamate racemase [Candidatus Riesia pediculicola USDA]
Length = 270
Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 8/248 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
ILI DSG+GGL V + + +P + YV D+ FPYGN ++ + KR++ L
Sbjct: 5 NFSQKILILDSGLGGLSVYKYLVRKLPNLSYTYVFDNEFFPYGNRKESFIIKRVIRLIDQ 64
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
I + + ++ACNT + + L+ F LG+VP I A +T++ +I +L+T
Sbjct: 65 IQRDREFEIIILACNTVSVVSINILKDIFSDYIILGSVPEIDVAIQFTKNKVIYVLATKR 124
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ Y N + Y + IHLVSS L +EE G I +++I ++ +
Sbjct: 125 TI--EYIRNKVSFYSKEFKIHLVSSSKLVRMIEEKIRGKIILKNKIYSILKNL---SNHQ 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDD 247
D IVL CTHY I ++ P ++ +D+ +I + + + + + ++
Sbjct: 180 IPDTIVLGCTHYSFISKEIKEAFPKCINLIDSKKNIYDDLTNYVDKRSKKKEYYDKYHEN 239
Query: 248 HALFLSGK 255
F
Sbjct: 240 MVFFTKSD 247
>gi|118475058|ref|YP_891779.1| glutamate racemase [Campylobacter fetus subsp. fetus 82-40]
gi|166231031|sp|A0RNJ6|MURI_CAMFF RecName: Full=Glutamate racemase
gi|118414284|gb|ABK82704.1| glutamate racemase [Campylobacter fetus subsp. fetus 82-40]
Length = 253
Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL +L + FIY AD+ PYG + + + L
Sbjct: 3 IAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSKDEIIRLCLNCV-QFLTNL 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA + ELRS+F S+ +G PA+K G I +++TPAT+
Sbjct: 62 SVDMIVIACNTATSAAITELRSSF-SVPIIGMEPAVK--LGVNAGGDILVVATPATISGN 118
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
S+LIH + HL++ L E+A ++ E+ K ++ + + ++
Sbjct: 119 KLSDLIHKVNLESKTHLLALPKLV----EFAQNMEFDSLEVLKYLKDEISKFDLSNISLL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+ FR + P +D + + L
Sbjct: 175 VLGCTHFNYFKDSFRAILPNKTGIIDGVNGTINQMIRRL 213
>gi|123968208|ref|YP_001009066.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. AS9601]
gi|123198318|gb|ABM69959.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. AS9601]
Length = 264
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 11/254 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG +L + + Y+AD PYGN ++ + + +DK
Sbjct: 5 IGIFDSGIGGFTILNSLLKTRKDVKVFYLADTKRIPYGNKNSKEIRLIAKEICTFFVDKN 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V ACNT D L F I + +I +L+T T+R +
Sbjct: 65 LDALLV-ACNTTNACALDILEDNLKVPCF----DLINSVSEIVDKQIIGVLATQRTVRSS 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y I++ I S +E+ K+ D++ + K + +
Sbjct: 120 YYKKAINAKKGNTIIFQQECPEFVSEIEK----EKLNLDKLNSLSDLYLRPLINKNIEEL 175
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHALFLS 253
+L C+HYPLI FR+ + +D S ++ ++ + + ++++ +++ F++
Sbjct: 176 ILGCSHYPLIYDFFRKKLDSNIKIIDPSVALIKKFNESFAISKTTSYESLFYENVDFFVT 235
Query: 254 GKPDIAMRRLMQGF 267
+ D ++++ F
Sbjct: 236 SEKDKFLKKVKFWF 249
>gi|261886270|ref|ZP_06010309.1| glutamate racemase [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 242
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL +L + FIY AD+ PYG + + + L
Sbjct: 3 IAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSKDEIIRLCLNCV-QFLTNL 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA + ELRS+F S+ +G PA+K G I +++TPAT+
Sbjct: 62 SVDMIVIACNTATSAAITELRSSF-SVPIIGMEPAVK--LGVNAGGDILVVATPATISGN 118
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
S+LIH + HL++ L E+A ++ E+ K ++ + + ++
Sbjct: 119 KLSDLIHKVNLESKTHLLALPKLV----EFAQNMEFDSLEVLKYLKDEISKFDLSNISLL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
VL CTH+ FR + P +D + + L
Sbjct: 175 VLGCTHFNYFKDSFRAILPNKTGIIDGVNGTINQMIRRL 213
>gi|213029822|ref|ZP_03344269.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 208
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 4/205 (1%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+
Sbjct: 1 MTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLA 59
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++R YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 60 TRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMP 119
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D +VL CTH+PL+ Q+ P +D+ +IARR LL +
Sbjct: 120 EP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDAN 177
Query: 248 HALFLSGKPD-IAMRRLMQGFGLKS 271
A ++ P + ++Q +G ++
Sbjct: 178 IAYCMAMTPGAEQLLPVLQRYGFET 202
>gi|317179086|dbj|BAJ56874.1| glutamate racemase [Helicobacter pylori F30]
Length = 255
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R N + ++ +++ + +EE I E E+ + +
Sbjct: 121 RSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|46091551|dbj|BAD13991.1| HP0549 [Helicobacter pylori]
Length = 255
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + +Y D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIVYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYTLKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|208434471|ref|YP_002266137.1| glutamate racemase [Helicobacter pylori G27]
gi|226707587|sp|B5Z6S2|MURI_HELPG RecName: Full=Glutamate racemase
gi|208432400|gb|ACI27271.1| glutamate racemase [Helicobacter pylori G27]
Length = 255
Score = 215 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKEKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|217033496|ref|ZP_03438925.1| hypothetical protein HP9810_905g15 [Helicobacter pylori 98-10]
gi|216944021|gb|EEC23452.1| hypothetical protein HP9810_905g15 [Helicobacter pylori 98-10]
Length = 255
Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R N + ++ +++ + +EE I E E+ + +
Sbjct: 121 RSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHQIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACTFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|257095297|ref|YP_003168938.1| glutamate racemase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257047821|gb|ACV37009.1| glutamate racemase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 261
Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 24/261 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL + +P +Y+AD PYG+ +D ++ R++ + ++D+
Sbjct: 2 IGVFDSGLGGLSVLAAIARALPRADLVYLADTAHVPYGDKDDAFIRSRVLRIGRHLVDQG 61
Query: 76 QPVLSVIACNTAFTLIKDEL-------RSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
V+ R +FP + +G P +K AAA ++SG I++L+T
Sbjct: 62 CGVIV--------VACNTATAAAVAAFRESFPMLPVVGVEPGVKPAAAASRSGRIAVLAT 113
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+T R + LI + + + A+RVE +++++ + +E
Sbjct: 114 ASTARSQRLAQLIRQHAGSVRVDVEPCPGWATRVES----LRLEDPDFVEEARQHLAPLL 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D IVL CTHY + + +D +D++AR+ L R
Sbjct: 170 AAGVDQIVLGCTHYAFLCPTLEPIVAQRASLVDVADAVARQCVRL----AGASARGRGQL 225
Query: 249 ALFLSGKPDIAMRRLMQGFGL 269
L + +P+ + + GL
Sbjct: 226 RLLATAQPER-LDAALPALGL 245
>gi|317181866|dbj|BAJ59650.1| glutamate racemase [Helicobacter pylori F57]
Length = 255
Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +++ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIRQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMKHFTLSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|91070144|gb|ABE11066.1| putative aspartate and glutamate racemases:glutamate racemase
[uncultured Prochlorococcus marinus clone HF10-11A3]
Length = 264
Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 15/260 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I IFDSGIGG +L + + Y+AD P+G+ ++ + +
Sbjct: 1 MKLKIGIFDSGIGGFTILNSLLKTRKDVEVFYLADTKRIPFGSKNFKEIRLIAKEICNFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
DK L V ACNT D L P + +V I +I +L+T
Sbjct: 61 ADKNLDALLV-ACNTTNACALDILEDNLKIPCFDLINSVSGIVD------KKIIGVLATQ 113
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R +Y I+S I S +E+ K+ ++ +
Sbjct: 114 ATVRSSYYKKAINSKKENTKIFQQECPEFVSEIEK----EKLNLHKLNYLSDLYLRPLIN 169
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDD 247
K + ++L C+HYPLI R+ + +D S ++ ++ + + +++ +++
Sbjct: 170 KNIEELILGCSHYPLIYDFLRKKLDSNIKIIDPSVALVKKFNESFAIQKTYCYESLSYEN 229
Query: 248 HALFLSGKPDIAMRRLMQGF 267
F++ + D+ +++ F
Sbjct: 230 VEFFVTSEKDVFFKKVKFWF 249
>gi|15645174|ref|NP_207344.1| glutamate racemase [Helicobacter pylori 26695]
gi|2492984|sp|P56068|MURI_HELPY RecName: Full=Glutamate racemase
gi|2313665|gb|AAD07615.1| glutamate racemase (glr) [Helicobacter pylori 26695]
Length = 255
Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--NYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|21672799|ref|NP_660866.1| glutamate racemase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25008820|sp|Q8K924|MURI_BUCAP RecName: Full=Glutamate racemase
gi|21623448|gb|AAM68077.1| glutamate racemase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 256
Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 114/217 (52%), Gaps = 3/217 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LI DSGIGGL +L ++ P ++IY+ D+ FPYG ++ L +R + + + I Y
Sbjct: 2 LIIDSGIGGLSILDNIKKKFPHINYIYMLDNEAFPYGKKKEKFLIERSIKIINAIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ +IACNTA T+ L+ TF S+ +G +P K A T++ +I +++T +T+ Y
Sbjct: 62 IKMVIIACNTASTISLPTLKKTF-SIPIIGVLPVFKPAIKITKNKIIGLIATRSTINSLY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I+ Y + I ++++ LA E+ + I ++KK + I + D I+
Sbjct: 121 IKKTIYKYSLENTIKIIATNELAVIAEKKVRKLSISNIKLKKIFQSWII--LSIKPDTII 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
L CTH+ + +Q+ P++++D D+I +
Sbjct: 179 LGCTHFSFLKKEIQQIFHKPINFIDPGDTIVNKIEKY 215
>gi|34557207|ref|NP_907022.1| glutamate racemase [Wolinella succinogenes DSM 1740]
gi|34482923|emb|CAE09922.1| GLUTAMATE RACEMASE [Wolinella succinogenes]
Length = 248
Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 97/255 (38%), Gaps = 15/255 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSGIGGL V++ + IY D PYG + + + + + L ++
Sbjct: 3 VGVFDSGIGGLSVVKSLLDSHAFEEIIYFGDTARVPYGVKDSETIIRYSLEALA-FLREF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132
+ ++ACNTA + LR + +G + A ++ I ++ T AT
Sbjct: 62 DIDMLIVACNTASAHALEALRQAA-DVDVIGVIEPGVLALENRLPDKNSPILVIGTKATT 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L+ + HI +++ +L VEE + E ++ ++ +
Sbjct: 121 ASGQYPALLKEHGY-THIQSLATGLLVPLVEEGIFHGSLLESALEHYFSSLAVKPK---- 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
I+L CTH+PLI + + ++I + + QT + F
Sbjct: 176 -AIILGCTHFPLIAKAISAYFNHEPLLIHSGEAIMQHLKERYELDYFPQTHI----QYFA 230
Query: 253 SGKPDIAMRRLMQGF 267
S P + +
Sbjct: 231 SENPLALEKVAKEWL 245
>gi|317010769|gb|ADU84516.1| glutamate racemase [Helicobacter pylori SouthAfrica7]
Length = 255
Score = 215 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 99/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPATIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQHVKNKNTPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFAPLKIVP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS-----PWPVD-WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI P + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAQKIESYFMEHFIPSKTPLLIHSGDAIVEYLQQ--KYALKKNAYAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|317009473|gb|ADU80053.1| glutamate racemase [Helicobacter pylori India7]
Length = 255
Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 97/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI + + D+I + T F
Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNTCAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|169335598|ref|ZP_02862791.1| hypothetical protein ANASTE_02013 [Anaerofustis stercorihominis DSM
17244]
gi|169258336|gb|EDS72302.1| hypothetical protein ANASTE_02013 [Anaerofustis stercorihominis DSM
17244]
Length = 269
Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
I I DSG+GGL V ++ L+P + IY+ D PYGN + + + S
Sbjct: 2 NKNQPIGILDSGVGGLTVFKQTERLLPNENIIYLGDTKRMPYGNKSEEEIIILANKMISY 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL--GAVPAIKQAAAYTQSGLISILST 128
L++ ++ACNT + ++L S P + + G+ A K+ ++ T LI +++T
Sbjct: 62 -LEEQDVKAVLLACNTISSH-IEKLTSKVPIFSIVKAGSELATKK-SSETNVDLIGLIAT 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + IH +I S L ++ + IK+ IE +
Sbjct: 119 KATVNSGSYNKEIHKLNKDINIISNDSTRLPKVIDSQIENKPLLNQLIKECIEPII--DK 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
K ++L C+H+P+I + + LD ++ + R L + +
Sbjct: 177 EKNVKNLILGCSHFPIIEKEINDIY-NDLTLLDPAEQMVENVRKYLKDKDLLKDNGTSHK 235
Query: 249 ALFLSGKPDIAMRRLMQ 265
L+ + + + +
Sbjct: 236 TLYTTADILEFVSYIKR 252
>gi|332673655|gb|AEE70472.1| glutamate racemase [Helicobacter pylori 83]
Length = 255
Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 100/261 (38%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KYSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVLHLATSLFVPLIEEN-----ILESELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHQIKGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|257456303|ref|ZP_05621500.1| glutamate racemase [Treponema vincentii ATCC 35580]
gi|257446389|gb|EEV21435.1| glutamate racemase [Treponema vincentii ATCC 35580]
Length = 255
Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIGGL + P+ YVAD FPYG + + + + I+++ P
Sbjct: 1 MDSGIGGLPYFRYFHQKAPQAPAAYVADLEHFPYGEKTRDEVIRFAVGVTEKIINRLNPE 60
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
+ ++ CNT T D LR TF S+ F+G VPA+K AA + + I I++T T+ Y
Sbjct: 61 MIIVVCNTMSTAALDALRKTF-SIPFVGTVPAVKVAAEVSVNKRIGIIATARTINDPYLD 119
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
LI S+ + C I + L +++E I ++E +K + + + TD +VLA
Sbjct: 120 KLIESFAADCTIERRADAELVAKIENGL--ITAPDEEKRKAVMPAIRQFKAAGTDTLVLA 177
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258
CTH+ + F + + + +D+ + A +LP T +++G+
Sbjct: 178 CTHFLHLADTFAECAAPEIKVVDSLPGVVSHALDVLPPPAGGNTSRSS---CYVTGEITE 234
Query: 259 AMRRLMQGF 267
+ RL +G+
Sbjct: 235 RIDRLYRGY 243
>gi|308182705|ref|YP_003926832.1| glutamate racemase [Helicobacter pylori PeCan4]
gi|308064890|gb|ADO06782.1| glutamate racemase [Helicobacter pylori PeCan4]
Length = 255
Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 97/263 (36%), Gaps = 19/263 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + +I +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVGYLQQ--KYTLKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
SG ++ + L
Sbjct: 233 KVEFHASGDVIWLEKQAKEWLAL 255
>gi|37811872|gb|AAR03940.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + +I +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALLTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|15611563|ref|NP_223214.1| glutamate racemase [Helicobacter pylori J99]
gi|11133705|sp|Q9ZLT0|MURI_HELPJ RecName: Full=Glutamate racemase
gi|151567728|pdb|2JFX|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|151567729|pdb|2JFX|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|151567730|pdb|2JFZ|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|151567731|pdb|2JFZ|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|168177008|pdb|2JFY|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|168177009|pdb|2JFY|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|217035286|pdb|2W4I|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|217035287|pdb|2W4I|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|217035288|pdb|2W4I|E Chain E, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|217035289|pdb|2W4I|F Chain F, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|4155036|gb|AAD06074.1| GLUTAMATE RACEMASE [Helicobacter pylori J99]
Length = 255
Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + + +G + A ++ I +L T AT+
Sbjct: 62 EIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + +I +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEE-----SILEGELLETCMHYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + + F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALKNNACTFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG R+ +
Sbjct: 233 KVEFHASGDVIWLERQAKEWL 253
>gi|261839621|gb|ACX99386.1| glutamate racemase [Helicobacter pylori 52]
Length = 255
Score = 214 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQQDY-LNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFTLSTPPLLIHSGDAIVEYLHQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|306480261|emb|CBV36488.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA +L +E++ + + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASSLALEEMQ-KYSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R N + ++ +++ + +EE I E E+ + +
Sbjct: 121 RSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLHQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVRLEKQAKEWL 253
>gi|328947305|ref|YP_004364642.1| glutamate racemase [Treponema succinifaciens DSM 2489]
gi|328447629|gb|AEB13345.1| Glutamate racemase [Treponema succinifaciens DSM 2489]
Length = 278
Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 10/246 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
DSG GG+ + ++ PE +Y+ D V FPYG + + ILD +
Sbjct: 8 AFLDSGTGGIPYMLSLKEKSPESRCVYLGDTVHFPYGEKSEEEVTLCASESIEKILDLWN 67
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + VIACNT ++LR FP + +G VPAIK AA T++ I +L+T AT++ Y
Sbjct: 68 PRIVVIACNTISVTALNQLRERFPDVPIVGTVPAIKLAAKVTKNKKIGLLATNATVKHPY 127
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
L+ + S + L + +E ++E ++ D I+
Sbjct: 128 CKKLVSDFASGYEVFNRGDPDLITFIEHDLFYA--SKEERTAAVKPAVDFFCSCGCDTII 185
Query: 197 LACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARCLLPRINTHQTR----VFDDH 248
L CTH+ + ++ ++ V +D+ D ++ A ++ + R + D
Sbjct: 186 LGCTHFTHMAEDIKEYFSTVAGKKVFVVDSRDGVSNHALEVVKITSLENQREPKFLPPDM 245
Query: 249 ALFLSG 254
+ F++
Sbjct: 246 SFFVTS 251
>gi|313681673|ref|YP_004059411.1| glutamate racemase [Sulfuricurvum kujiense DSM 16994]
gi|313154533|gb|ADR33211.1| glutamate racemase [Sulfuricurvum kujiense DSM 16994]
Length = 248
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 97/257 (37%), Gaps = 14/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL V++ + IY D PYG + + + + + + +
Sbjct: 3 VGVFDSGVGGLSVVKSLLEHKLFEEIIYFGDTARVPYGVKDQNTIIRYSLEAL-EFFKNF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L + ACNT DE+R +G V A + I IL T AT+
Sbjct: 62 EIDLLITACNTVSAYALDEMREH-SHCDVIGVVDPGVLALKNAIPSNDANILILGTKATV 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + S + ++ +++ +L VEE + E E+ + + K
Sbjct: 121 KSGAYEKGLRSLGYR-NLSAIATSLLVPIVEEG-----LYEGEVLQSALHHYFRDLEKTP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTH+PL+ + + ++I + + + F
Sbjct: 175 DAIILGCTHFPLVARAIDTYFEGKSTLIHSGEAIVEYLES---HYDFTKRFDTTNLKFFA 231
Query: 253 SGKPDIAMRRLMQGFGL 269
S P+ R + L
Sbjct: 232 SENPEGLRRVAKEWLAL 248
>gi|224418377|ref|ZP_03656383.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|253827696|ref|ZP_04870581.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|313141908|ref|ZP_07804101.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|253511102|gb|EES89761.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|313130939|gb|EFR48556.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
Length = 259
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 96/257 (37%), Gaps = 20/257 (7%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ VL + IY D PYG + + + D
Sbjct: 4 KKIGLFDSGVGGISVLGNLINSKTFEEIIYYGDTARVPYGTRSKETIIQYSLEAL-DFFK 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA---AYTQSGLISILSTPA 130
+++ L V+ACNT + ++ + +G + A + I +L T A
Sbjct: 63 QFKLDLLVVACNTISAYGLEAMQKA-TNYPIIGVIEPGVLALTNNLQNKDSKILVLGTKA 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ L+ + C I+ +++ + VEE G KI E + + + +
Sbjct: 122 TIQSQLYQTLLENQGYSC-INSLATSLFVPLVEEGIFGGKILES-----VMEYYFQDYTE 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D I+L CTH+PLI P + + +I + + + +
Sbjct: 176 KPDAIILGCTHFPLISKTIAHYFQNKFPTPNKPILIHSGIAIMEYLKA---KYTLQKPSI 232
Query: 245 FDDHALFLSGKPDIAMR 261
+ S + +
Sbjct: 233 ASKVTFYASDNLEKLKK 249
>gi|37811906|gb|AAR03971.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALPTPPLLIHSGDAIVGYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|46091437|dbj|BAD13881.1| HP0549 [Helicobacter pylori]
Length = 286
Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 93/249 (37%), Gaps = 19/249 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALGEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R N + ++ +++ + +EE I E E+ + +
Sbjct: 121 RSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYLMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGK 255
SG
Sbjct: 233 KVEFHASGD 241
>gi|109947429|ref|YP_664657.1| glutamate racemase [Helicobacter acinonychis str. Sheeba]
gi|123066226|sp|Q17XG8|MURI_HELAH RecName: Full=Glutamate racemase
gi|109714650|emb|CAJ99658.1| murI [Helicobacter acinonychis str. Sheeba]
Length = 255
Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDSATIKQFSLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132
+ L ++ACNTA L + ++ + +G + A ++ I +L T AT+
Sbjct: 62 EIELLIVACNTASALALETMQ-KHSKIPIVGVIEPSILAIKQHVKDKNTPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + N + ++ +++ + +EE + E E+ + +
Sbjct: 121 RSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----VLEGELLETCMRYYFAPLKIFP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIESYFVEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNVYAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KIEFHASGDVIWLEQQAKEWL 253
>gi|238789626|ref|ZP_04633410.1| Glutamate racemase [Yersinia frederiksenii ATCC 33641]
gi|238722379|gb|EEQ14035.1| Glutamate racemase [Yersinia frederiksenii ATCC 33641]
Length = 212
Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++
Sbjct: 2 LEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVG 60
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T T+ +YT +LI + + C I L+ S L E G + + +KK +
Sbjct: 61 LLATRGTVHASYTLDLIERFATDCKIELLGSSELVELAESKLHGGVVPVEALKKILHPWL 120
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ +
Sbjct: 121 MMREP--PDTIVLGCTHFPLLAEELAQVLPEGTRMVDSGAAIARRTAWLISSQENIISST 178
Query: 245 FDDHALFLSGKPDI-AMRRLMQGFGLKS 271
++ A ++ D A+ ++QG+G +
Sbjct: 179 DENIAYCMALNADTDALLPVLQGYGFPT 206
>gi|317180321|dbj|BAJ58107.1| glutamate racemase [Helicobacter pylori F32]
Length = 255
Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALGEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R N + ++ +++ + +EE I E E+ + +
Sbjct: 121 RSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYLMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|126695981|ref|YP_001090867.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9301]
gi|126543024|gb|ABO17266.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9301]
Length = 264
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ + IFDSGIGG +L + + + Y+AD P+GN + ++ + +
Sbjct: 1 MKIKVGIFDSGIGGFTILNSLLKIRKDVEVFYLADTKRIPFGNKDSKEIRLIAKEICTFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+DK L V ACNT D L + I + + +I +L+T T
Sbjct: 61 VDKNLDALLV-ACNTTNACALDILEDNLK----IPCFDLINSVSELVEKQIIGVLATSTT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y I++ I S +E+ K+ D++ + K
Sbjct: 116 VRSSYYEKAINTKKENTIILQQECPKFVSEIEK----EKLNLDKLNSLSDLYLRPLINKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ ++L C+HYPLI + R+ + +D S + ++ +P ++ F++
Sbjct: 172 IEELILGCSHYPLIYDILRKKLGPNIKIIDPSIGLIKKFNESFAIPETERCESISFENVK 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F++ + D ++ G+
Sbjct: 232 FFVTSERDNFSNKVKFWLGIN 252
>gi|37811838|gb|AAR03910.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 98/263 (37%), Gaps = 23/263 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS--------PWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+V++L CTH+PLI P + + D+I +
Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEYFALSTPP--LLIHSGDAIVEYLQQ--KYALKKNACA 230
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 231 FPKVEFHASGDVVWLEKQAKEWL 253
>gi|317012362|gb|ADU82970.1| glutamate racemase [Helicobacter pylori Lithuania75]
Length = 255
Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALKEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI + + D+I + T VF
Sbjct: 175 EVVILGCTHFPLIAQKIGGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNTHVFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|297379750|gb|ADI34637.1| glutamate racemase [Helicobacter pylori v225d]
Length = 255
Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHPIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|317013968|gb|ADU81404.1| glutamate racemase [Helicobacter pylori Gambia94/24]
Length = 255
Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 EIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 KVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|188527606|ref|YP_001910293.1| glutamate racemase [Helicobacter pylori Shi470]
gi|229486238|sp|B2UTT1|MURI_HELPS RecName: Full=Glutamate racemase
gi|188143846|gb|ACD48263.1| glutamate racemase [Helicobacter pylori Shi470]
Length = 255
Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|256544593|ref|ZP_05471965.1| glutamate racemase [Anaerococcus vaginalis ATCC 51170]
gi|256399482|gb|EEU13087.1| glutamate racemase [Anaerococcus vaginalis ATCC 51170]
Length = 249
Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 9/217 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL VL+++ + ++ Y+ D+ PYG+ + + + + +L K
Sbjct: 3 NIGVFDSGLGGLTVLKELSKKH-KANYFYLGDNKNVPYGDKSNEEIIELSKKIVKFLLKK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNT T+ + LR F AIK++ G I +++T AT +
Sbjct: 62 -DIDFFVIACNTISTVAIEYLRKEFDKKFISITDQAIKKSLEC--EGDIFVMATKATCLQ 118
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I S + + +L S +E+ +K D + K ++ K+ +
Sbjct: 119 HTYKIKIEE-NSNKKVFEKACPLLVSLIEKGI----VKGDVLDKALKDYLELANEKKIEN 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
IVL CTHYP++ + + + +D ++ +A+ +
Sbjct: 174 IVLGCTHYPIVEDEIFKNLNYKANIIDPANVLAQNIK 210
>gi|322379012|ref|ZP_08053415.1| glutamate racemase [Helicobacter suis HS1]
gi|322380777|ref|ZP_08054883.1| glutamate racemase [Helicobacter suis HS5]
gi|321146781|gb|EFX41575.1| glutamate racemase [Helicobacter suis HS5]
gi|321148504|gb|EFX43001.1| glutamate racemase [Helicobacter suis HS1]
Length = 260
Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 17/246 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL+ + H IY D PYG + ++K + D Y
Sbjct: 12 VGVFDSGVGGLSVLESLLKARLFEHIIYYGDTARVPYGPKDPATIQKFSLEAL-DFFKPY 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPATLR 133
Q + ++ACN+ ++R+ M +G + A + +Q I IL T AT+
Sbjct: 71 QIDMLIVACNSVSAWALPQMRNQ-SKMPIVGVIEAGVLSVLKKTSQEQPILILGTKATIA 129
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + ++ + ++ +++ + +EE + E + F + +
Sbjct: 130 SNRYAKELGAHGYK-NVQSLATGLFVPLIEEGVLEGPLLEACM----VHYFKDLKCA-PS 183
Query: 194 VIVLACTHYPL----IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
V+VL CTH+P + F + P +++ + ++I + + N +
Sbjct: 184 VVVLGCTHFPWIVSSLKGYFLERFKTPCEFVHSGEAIVEYLQ---EKYNLLSRNQESNLE 240
Query: 250 LFLSGK 255
LF SG
Sbjct: 241 LFASGD 246
>gi|315453056|ref|YP_004073326.1| glutamate racemase [Helicobacter felis ATCC 49179]
gi|315132108|emb|CBY82736.1| glutamate racemase [Helicobacter felis ATCC 49179]
Length = 252
Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 51/259 (19%), Positives = 98/259 (37%), Gaps = 18/259 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL+ + IY D PYG + ++ + + Y
Sbjct: 3 VGIFDSGVGGLSVLKSVLQARLFAEIIYYGDTARVPYGPKDKATIEHFALEAL-EFFKPY 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q + ++ACNT L +++R+ S+ +G + A A + I +L T AT+
Sbjct: 62 QIEMLIVACNTVSALALEKMRAH-SSIPIVGVIEAGILATIQQFPNKHTPILVLGTRATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + ++ ++ +++ + +EE + E + + + E
Sbjct: 121 ASGQYAQHLSAHGY-SNVQSLATGLFVPLIEEG-----VLEGALLRACMQHYFENIQNAP 174
Query: 193 DVIVLACTHYPLIVHVFRQL----SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
V++L CTH+PLI + P + + D+I + +
Sbjct: 175 TVLILGCTHFPLIASSLQNYFQTRFNHPCALVHSGDAIVHYLQD---THHLIPLNHPPQV 231
Query: 249 ALFLSGKPDIAMRRLMQGF 267
F SG +
Sbjct: 232 RFFASGDVKTLKVQAKAWL 250
>gi|198284544|ref|YP_002220865.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666518|ref|YP_002427212.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198249065|gb|ACH84658.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518731|gb|ACK79317.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 269
Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL L +P+ H+++ D PYG+ +++ ++ +
Sbjct: 3 IGIFDSGIGGLSTLLSCLRYLPDAHYLFYGDSAHAPYGDKSPAQVREWTEAAYAWFIAAG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + LR + +G PAI++A G + +L+T T+
Sbjct: 63 -VDAVVLACNTATSAAVAPLRERA-DVPIIGIEPAIRKALTEHPQGGVLLLATSITVGGE 120
Query: 136 Y-TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L Q + ++ LA +E +++ + ++ V
Sbjct: 121 KLRNLLNLLENGQERVRPLACSGLAEIIEAQDADWRLRAG---RYLQAQVRPARTADIGV 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFDDHA---L 250
+VL CTHY I + + +D ++ +AR+ R L I T HA L
Sbjct: 178 VVLGCTHYCWIDDLIHDTLGGDITVVDGNEGVARQLCRRLGVPIRTDTAPPLPRHARISL 237
Query: 251 FLSGKPDI---AMRRLMQGFGLK 270
+ + D+ R+L+ G++
Sbjct: 238 YFTANNDVKSHLARQLLAASGVR 260
>gi|108562952|ref|YP_627268.1| glutamate racemase [Helicobacter pylori HPAG1]
gi|123373795|sp|Q1CTX8|MURI_HELPH RecName: Full=Glutamate racemase
gi|107836725|gb|ABF84594.1| glutamate racemase [Helicobacter pylori HPAG1]
Length = 255
Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|1752702|gb|AAC44708.1| Glr [Helicobacter pylori]
Length = 255
Score = 212 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQ--KYALKKNAHAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|238750876|ref|ZP_04612374.1| Glutamate racemase [Yersinia rohdei ATCC 43380]
gi|238711020|gb|EEQ03240.1| Glutamate racemase [Yersinia rohdei ATCC 43380]
Length = 211
Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
M + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++
Sbjct: 1 MEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNGVVG 59
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T T+ +YT +LI + + C I L+ S L E G + + +KK +
Sbjct: 60 LLATRGTVHASYTLDLIERFATDCKIELLGSSDLVELAETKLHGGTVPTEALKKILHPWL 119
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ +E D IVL CTH+PL+ Q+ P +D+ +IARR L+ +
Sbjct: 120 MMREP--PDTIVLGCTHFPLLAAELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSST 177
Query: 245 FDDHALFLSGKPDI-AMRRLMQGFGLKS 271
++ A ++ D A+ ++QG+G +
Sbjct: 178 DENIAYCMALNADTDALLPVLQGYGFPT 205
>gi|308061881|gb|ADO03769.1| glutamate racemase [Helicobacter pylori Cuz20]
Length = 255
Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 100/262 (38%), Gaps = 21/262 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA----IKQAAAYTQSGLISILSTPAT 131
+ L ++ACNTA L +E++ + +G + IKQ ++ I +L T AT
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILSIKQQVKD-KNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE I E E+ + +
Sbjct: 120 IQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACTF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|254779458|ref|YP_003057563.1| glutamate racemase [Helicobacter pylori B38]
gi|254001369|emb|CAX29354.1| Glutamate racemase [Helicobacter pylori B38]
Length = 255
Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 97/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQIKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|45656923|ref|YP_001009.1| glutamate racemase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|59798336|sp|Q72TI2|MURI_LEPIC RecName: Full=Glutamate racemase
gi|45600160|gb|AAS69646.1| glutamate racemase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 256
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 14/264 (5%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ I + DSG+GGL VL+++ E +Y D PYG + + + + + +
Sbjct: 1 MKEPLKIGLMDSGMGGLSVLKELLKYDSELEIVYYGDLKNSPYGEKDASEVLELVRSVCN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L K ++ACNTA + LR F S+ G PAIK A +++L+TP
Sbjct: 61 -FLQKENVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKVALLATP 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T R L ++ + +S LA V++ D+ +K + +
Sbjct: 119 VTQREEKLQRLKSELKAEELVLSISCPGLAGLVDQGDF------DKAEKYLRPILANLQE 172
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ + +VL CTHY + + + P V D + + L ++ +
Sbjct: 173 QDVENLVLGCTHYVFLKQIILKNFP-NVKIYDGNSGTIKHLLNSLQVPRVILNGSQNNRS 231
Query: 250 LF---LSGKPDIAMRRLMQGFGLK 270
++ L+ + + R + LK
Sbjct: 232 IYKLILNSEKEFHFRLASKLLSLK 255
>gi|24215750|ref|NP_713231.1| glutamate racemase [Leptospira interrogans serovar Lai str. 56601]
gi|59798407|sp|Q8F1S7|MURI_LEPIN RecName: Full=Glutamate racemase
gi|24196929|gb|AAN50249.1| glutamate racemase [Leptospira interrogans serovar Lai str. 56601]
Length = 256
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 14/264 (5%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ I + DSG+GGL VL+++ E +Y D PYG + + + + + +
Sbjct: 1 MKEPLKIGLMDSGMGGLSVLKELLKYDSELEIVYYGDLKNSPYGEKDASEVLELVRSVCN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L K ++ACNTA + LR F S+ G PAIK A +++L+TP
Sbjct: 61 -FLQKENVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKVALLATP 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T R L ++ + +S LA V++ D+ +K + +
Sbjct: 119 VTQREEKLQRLKSELKAEELVLSISCPGLAGLVDQGDF------DKAEKYLRPILANLQE 172
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ + +VL CTHY + + + P V D + + L ++ +
Sbjct: 173 QDVENLVLGCTHYVFLKQIILKNFP-NVKIYDGNSGTIKHLLNSLQVPRVILNGSQNNRS 231
Query: 250 LF---LSGKPDIAMRRLMQGFGLK 270
++ L+ + + R + LK
Sbjct: 232 IYKLILNSEKEFHFRLASELLSLK 255
>gi|47093489|ref|ZP_00231251.1| glutamate racemase [Listeria monocytogenes str. 4b H7858]
gi|47018107|gb|EAL08878.1| glutamate racemase [Listeria monocytogenes str. 4b H7858]
Length = 211
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 74/202 (36%), Gaps = 7/202 (3%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
++ L + VIACNTA ++R + +G + P + A T++ I +L
Sbjct: 1 MTNFLVDRGIKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVL 59
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + + ++ S VE + K KK + +
Sbjct: 60 GTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESG----EYKSAIAKKVVAESLLP 115
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ + D ++L CTHYPL+ + V +++ + A LL N +
Sbjct: 116 LKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEE 175
Query: 247 -DHALFLSGKPDIAMRRLMQGF 267
+H F +G I
Sbjct: 176 IEHRFFTTGSTQIFKDIAKDWL 197
>gi|315586766|gb|ADU41147.1| glutamate racemase [Helicobacter pylori 35A]
Length = 255
Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSILAINQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R N + ++ +++ + +EE I E E+ + +
Sbjct: 121 RSHAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|317177617|dbj|BAJ55406.1| glutamate racemase [Helicobacter pylori F16]
Length = 255
Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 99/263 (37%), Gaps = 23/263 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS--------PWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+V++L CTH+PLI H P + + D+I +
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEYFALSTPP--LLIHSGDAIVEYLQQ--KYALKKNACA 230
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 231 FPKVEFHASGDVVWLEKQAKEWL 253
>gi|254525989|ref|ZP_05138041.1| glutamate racemase [Prochlorococcus marinus str. MIT 9202]
gi|221537413|gb|EEE39866.1| glutamate racemase [Prochlorococcus marinus str. MIT 9202]
Length = 264
Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 15/263 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + IFDSGIGG +L + + Y+AD P+G ++ + +
Sbjct: 1 MNLKVGIFDSGIGGFTILNSLLKTRKDVEVFYLADTKRIPFGGKNFKEIRLIAKEICNFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+DK L V ACNT D + + P + +V I +I +L+T
Sbjct: 61 VDKNLDALLV-ACNTTNACALDIMENNLKVPCFDLINSVSGIVD------KQIIGVLATQ 113
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+R +Y N I+S I S +E+ K+ D++ +
Sbjct: 114 TTVRSSYYKNAINSKKENTIIFQQECPEFVSEIEK----EKLNLDKLNYLSDLYLRPLIN 169
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDD 247
K + ++L C+HYPLI R+ + +D S ++ +R +P+ ++ +++
Sbjct: 170 KNIEELILGCSHYPLIYDFLRKKLDSNITIIDPSVALIKRFNKFFDIPKTACYERLSYEN 229
Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270
F++ + D ++ G+
Sbjct: 230 VEFFVTSERDEFSNKVKFWLGIN 252
>gi|319760706|ref|YP_004124644.1| glutamate racemase [Candidatus Blochmannia vafer str. BVAF]
gi|318039420|gb|ADV33970.1| glutamate racemase [Candidatus Blochmannia vafer str. BVAF]
Length = 281
Score = 211 bits (539), Expect = 8e-53, Method: Composition-based stats.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+++LI DSG+GGL + +R ++P +++Y+ D+ FPYGN + + +R++ + I
Sbjct: 12 STVLILDSGVGGLFFYETVRRIVPFVNYLYLIDNKCFPYGNCSEKFIIQRVILIIERICR 71
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNT + L+ F +G VP I+ A T++G++ IL T T+
Sbjct: 72 FLKFDLVVIACNTISVVALSILQINFR-FPIIGVVPEIQLACQCTKNGVVGILGTCRTVN 130
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y N I + + +I L+ + L E G + + E+ + K D
Sbjct: 131 NKYIFNSIKRFAYKKNIVLLGTSRLVELAESKVYGNLVSKLELIDILNPWL--NLKKIPD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
IVL CTH+ + + + P +D+S+ + + LL
Sbjct: 189 TIVLGCTHFSWLKSELQSVLPVDSCLIDSSNRLINHIKYLLN 230
>gi|308063661|gb|ADO05548.1| glutamate racemase [Helicobacter pylori Sat464]
Length = 255
Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L E++ P + +G ++ AIKQ ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALKEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|302381780|ref|YP_003817603.1| glutamate racemase [Brevundimonas subvibrioides ATCC 15264]
gi|302192408|gb|ADK99979.1| Glutamate racemase [Brevundimonas subvibrioides ATCC 15264]
Length = 312
Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 95/277 (34%), Gaps = 26/277 (9%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL V +++ +Y+AD P G+ + + + +
Sbjct: 31 AIGVFDSGVGGLTVHRELTRRFSTRDLVYLADQANAPIGSRSGEEIVEITRNGCERLF-Q 89
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF---------PSMAFLGAV-PAIKQAAAYTQS---- 120
+ V+ACNTA + L+ T+ + LG + P I+ A +
Sbjct: 90 AGASVVVLACNTASAVALRRLQQTWVAEAAVRHGRPLNVLGIIVPTIEAATGLPWTYEAE 149
Query: 121 ---------GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + T AT I + LA +E A ++
Sbjct: 150 RLGDKVEAIDITGVFCTAATAISRVYEIEIDKRREDLAVFSEPCPGLAGLIELGAPTEEL 209
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ ++ + G+ D +L CTHY ++ +F P + ++A
Sbjct: 210 -RVVVADHVDA-LRRRIGRHPDTAILGCTHYEIVADLFAAALPDGTTLIHQPSAVADALE 267
Query: 232 CLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
R + +GK R+ Q +G
Sbjct: 268 RYFARHPEYALGDSGRRTFLTTGKTGPQSDRVSQFWG 304
>gi|326385030|ref|ZP_08206702.1| glutamate racemase [Gordonia neofelifaecis NRRL B-59395]
gi|326196244|gb|EGD53446.1| glutamate racemase [Gordonia neofelifaecis NRRL B-59395]
Length = 220
Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 83/216 (38%), Gaps = 9/216 (4%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQA 114
++K + + +++ + VIACNTA + R + + + + PA+++A
Sbjct: 2 SIPEIRKHALAIGDELVQRG-VKAIVIACNTASAACLRDARERYAPIPVIEVILPAVRRA 60
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
T++G I ++ T AT+ + + I V VE +
Sbjct: 61 VVATKTGRIGVIGTEATIASRAYQDSFAA-ARDVEITAVPCPRFVDFVERGITSGR---- 115
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+I EG + D +VL CTHYPL+ V + + V + +++ A+ +L
Sbjct: 116 QILGLAEGYLEPLQEADVDTLVLGCTHYPLLSGVVQLVMGDEVTLVSSAEETAKDTFRVL 175
Query: 235 PRINTHQTRVFDD--HALFLSGKPDIAMRRLMQGFG 268
+T +G P+ + + G
Sbjct: 176 TESDTLHPHTNRQARRQFSATGDPESFRKLSTRFLG 211
>gi|37811807|gb|AAR03882.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 97/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI + + D+I + F
Sbjct: 175 EVVILGCTHFPLIARQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|255020717|ref|ZP_05292777.1| Glutamate racemase [Acidithiobacillus caldus ATCC 51756]
gi|254969833|gb|EET27335.1| Glutamate racemase [Acidithiobacillus caldus ATCC 51756]
Length = 274
Score = 210 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 65/257 (25%), Positives = 100/257 (38%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL L +P + + D PYG+ + +++ + L
Sbjct: 3 IGVFDSGLGGLSTLLACLRYLPSAEYRFFGDVAHAPYGDKDPQVVRRWTAEAYERFLAAG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + LR P + LG PAIK+A +SG I +L+T T+R
Sbjct: 63 -VDAVVLACNTATSAAAAPLREQSP-VPILGLEPAIKKALDV-ESGPILLLATTLTVRGD 119
Query: 136 YTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKI-KEDEIKKEIEGCFIEKEGKRTD 193
L+ +Q + V+ L VE + E ++ + F+E K
Sbjct: 120 KLRALLQRMDGAQQRVRAVACPGLMEIVEAQTTDWRAQAESYWRERLLPHFVELRPKG-- 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---L 250
+VL CTHY + FR D +D +AR L A L
Sbjct: 178 -LVLGCTHYCWLEDAFRDWVGPGCRVYDGNDGLARHLWRRLYGTEAPAPGALPQVARVQL 236
Query: 251 FLSGKPDIAMRRLMQGF 267
S K + ++
Sbjct: 237 EFSAKREEKTQQASAWL 253
>gi|30959110|gb|AAO73314.1| glutamate racemase [Helicobacter pylori]
Length = 231
Score = 210 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 17/226 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + +I +++ + +EE G E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEESILGG-----ELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARC 232
+VI+L CTH+PLI + + D+I +
Sbjct: 175 EVIILGCTHFPLIAQKIESYFMEHFALLTPPLLIHSGDAIVEYLQQ 220
>gi|238799428|ref|ZP_04642856.1| Glutamate racemase [Yersinia mollaretii ATCC 43969]
gi|238716722|gb|EEQ08610.1| Glutamate racemase [Yersinia mollaretii ATCC 43969]
Length = 211
Score = 210 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 4/206 (1%)
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L
Sbjct: 3 IVTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLL 61
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ +YT +LI + + C I L+ S L E G + + +KK +
Sbjct: 62 ATRGTVHASYTLDLIARFATDCKIELLGSSELVELAETKLHGGVVPVEALKKILHPWLAM 121
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + +
Sbjct: 122 REP--PDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSSQDE 179
Query: 247 DHALFLSGKPDI-AMRRLMQGFGLKS 271
+ A ++ D A+ ++QG+G +
Sbjct: 180 NMAYCMALNVDTDALLPVLQGYGFPT 205
>gi|15615633|ref|NP_243937.1| glutamate racemase [Bacillus halodurans C-125]
gi|10175693|dbj|BAB06790.1| glutamate racemase [Bacillus halodurans C-125]
Length = 200
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 7/185 (3%)
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA ++ DE++ P + +G V P A T++ ++++ T T++
Sbjct: 1 MLVIACNTAAAVVLDEVKEKLP-IPVVGVVQPGAISALKVTKNEHVAVIGTTGTIQSGAY 59
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + ++ + ++ VE E + +GK D ++L
Sbjct: 60 EHTLKKINNRVQVESLACPPFVPLVERGI----FSGPEALETCSETLKPLQGKGFDTLIL 115
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKP 256
CTHYPL+ V +++ + + + D AR LL +T +H + +G
Sbjct: 116 GCTHYPLLKPVIQEVMGPDIQIISSGDETAREVSGLLYHKQRLRTCNEAPEHHFYTTGDA 175
Query: 257 DIAMR 261
R
Sbjct: 176 KSFKR 180
>gi|261838209|gb|ACX97975.1| glutamate racemase [Helicobacter pylori 51]
Length = 255
Score = 209 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 94/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T A +
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAMI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI + + D+I F
Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFALSAPPLLIHSGDAIVEYLHQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|301166907|emb|CBW26486.1| putative glutamate racemase [Bacteriovorax marinus SJ]
Length = 256
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
SI IFDSGIGG +L+K+ L PE Y+AD PYGN + R +L +++ K
Sbjct: 8 SIGIFDSGIGGFSILKKIHELAPELEVYYIADQGFAPYGNKSRKEVIDRCHYLCHELM-K 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+ L V+ACNTA + DELR+TF ++ F+G P + + +T +S +++T
Sbjct: 67 FDLDLIVVACNTATGVAIDELRNTF-TIPFVGVEPFVNALSKHTWKESDRACVITTELMS 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L++ + + LA+ VE++ E+E+ +++
Sbjct: 126 KSERFQKLVNRLDPDKRLFYKVTPGLATIVEDFFINK--NEEELNLKLKEELSFVGESSY 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
++L CTHYPLI + V L +A R LL + + F F
Sbjct: 184 SHLILGCTHYPLIAKYIEATTGASV--LSPCLYVANRVLSLLDLSSGENSETFQ----FA 237
Query: 253 SGKPDIAMRRLMQGF 267
S + +R + + F
Sbjct: 238 STAKEDVLRFVSKDF 252
>gi|217967731|ref|YP_002353237.1| glutamate racemase [Dictyoglomus turgidum DSM 6724]
gi|217336830|gb|ACK42623.1| glutamate racemase [Dictyoglomus turgidum DSM 6724]
Length = 265
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 13/256 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I I DSG+GGL VL+++ ++ D FPYG +++R+ + S
Sbjct: 2 SKIGILDSGVGGLSVLKEVYLNNLADEVYFLGDTKYFPYGIKPVEFIQERVFEIVSFF-K 60
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+IACNTA ++ D L+ F + V + A ++ I +L+T T+
Sbjct: 61 SLGVEEVIIACNTASSVAYDFLKDRFRDLKIHSIVLGAIEGAKNYKAKKIGVLATRRTME 120
Query: 134 RTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
LIH +S +++ S +E GI ++ + I+KEI C K
Sbjct: 121 SNIYPRLIHEKISDKIEVYVQSCSE-GPLLETIEKGI-VEGELIEKEIMRCIDPLVEKNI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ ++L CTH P + V + L P + +D S + R + +F+
Sbjct: 179 EGLILGCTHLPFVKKVIKDLYP-NLFVVDPSLEVINFLRS--------DSNFNTKVEIFV 229
Query: 253 SGKPDIAMRRLMQGFG 268
+G+ + L + G
Sbjct: 230 TGEAEEFQGILNKLLG 245
>gi|291277066|ref|YP_003516838.1| putative glutamate racemase [Helicobacter mustelae 12198]
gi|290964260|emb|CBG40109.1| putative glutamate racemase [Helicobacter mustelae 12198]
Length = 309
Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 46/217 (21%), Positives = 81/217 (37%), Gaps = 10/217 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
IFDSG GGL VL+ + IY D PYG ++ + +L +
Sbjct: 4 GIFDSGAGGLSVLEHVLRAEIFDSIIYYGDTARLPYGTKHPDSIICFCLEALEFLLVQ-N 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG---LISILSTPATLR 133
+ ++ACNTA D ++ P + +G + A I +L T AT++
Sbjct: 63 VDIIIVACNTASAHALDAMQKAAPKIPIIGVIEPGILAIKNRLKNLDAKILVLGTKATIQ 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +I + + + S VEE + E+ ++ + D
Sbjct: 123 SAQYQRHLEKLGY-SNITAIPTSLFVSLVEEGIFEGPLVEECLR-----YYFGGIDFVPD 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
I+L CTH+PL+ + ++I +
Sbjct: 177 AIILGCTHFPLLQKPIAAYFQNKSLLIHAGEAIVQYI 213
>gi|91070263|gb|ABE11182.1| putative aspartate and glutamate racemases:glutamate racemase
[uncultured Prochlorococcus marinus clone HF10-11H7]
Length = 264
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I IFDSGIGG +L + + Y+AD P+GN ++ + +
Sbjct: 1 MKLKIGIFDSGIGGFTILNSLLKTRQDVEVFYLADTKRIPFGNKNSKEIRLIAKEICTFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+DK L V ACNT D L F I + +I +L+T T
Sbjct: 61 VDKNLDALLV-ACNTTNACALDILEDNLKVPCF----DLINSVSEIVDKRIIGVLATQTT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y I++ I S +E+ K+ D++ + K
Sbjct: 116 VRSSYYKKAINAKKESTIIFQQECPKFVSEIEK----EKLNLDKLNTLSDLYLRPLIIKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ ++L C+HYPLI R+ + +D S ++ ++ +P +++ ++
Sbjct: 172 IEELILGCSHYPLIYDFLRKKLDSNIKIIDPSVALIKKFNESFAIPENYRYESISLENVK 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F++ + D ++ G+
Sbjct: 232 FFVTSERDEFFNKVKFWLGIN 252
>gi|33435087|gb|AAP39987.2| glutamate racemase [Helicobacter acinonychis]
Length = 255
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FD+G+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDTGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDSATIKQFSLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132
+ L ++ACNTA L + ++ + +G + A ++ I +L T AT+
Sbjct: 62 EIELLIVACNTASALALETMQ-KHSKIPIVGVIEPSILAIKQHVKDKNTPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + N + ++ +++ + +EE + E E+ + +
Sbjct: 121 RSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----VLEGELLETCMRYYFAPLKIFP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIESYFVEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNVYAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KIEFHASGDVIWLEQQAKEWL 253
>gi|157413034|ref|YP_001483900.1| glutamate racemase [Prochlorococcus marinus str. MIT 9215]
gi|157387609|gb|ABV50314.1| Glutamate racemase [Prochlorococcus marinus str. MIT 9215]
Length = 264
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 15/263 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + IFDSGIGG +L + + Y+AD P+G ++ + +
Sbjct: 1 MNLKVGIFDSGIGGFTILNSLLKTRKDIEVFYLADTKRIPFGGKNFVEIRLIAKEICNFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+DK L V ACNT D + + P + +V I +I +L+T
Sbjct: 61 VDKNLDALLV-ACNTTNACALDIMENNLKVPCFDLINSVSGIVD------KQIIGVLATQ 113
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+R +Y N I+S I S +E+ K+ D++ +
Sbjct: 114 TTVRSSYYKNAINSKKENTIIFQQECPEFVSEIEK----EKLNLDKLNYLSDLYLRPLIN 169
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDD 247
K + ++L C+HYPLI R+ + +D S ++ ++ +P+ ++ +++
Sbjct: 170 KNIEELILGCSHYPLIYDFLRKKLDSNITIIDPSVALIKKFNQFFDIPKTACYEGLSYEN 229
Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270
F++ K D ++ G+
Sbjct: 230 VEFFVTSKRDEFSSKVKFWLGIN 252
>gi|167467898|ref|ZP_02332602.1| glutamate racemase [Yersinia pestis FV-1]
Length = 198
Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 61/180 (33%), Positives = 101/180 (56%), Gaps = 1/180 (0%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ +
Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 80 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 198
>gi|30959108|gb|AAO73313.1| glutamate racemase [Helicobacter pylori]
Length = 231
Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 17/226 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARC 232
+VI+L CTH+PLI H P P + + D+I +
Sbjct: 175 EVIILGCTHFPLIAHQIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ 220
>gi|197693662|gb|ACH71500.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+V++L CTH+PLI L
Sbjct: 175 EVVILGCTHFPLIAQKIESYFMEHFALL 202
>gi|254419828|ref|ZP_05033552.1| Asp/Glu/Hydantoin racemase superfamily [Brevundimonas sp. BAL3]
gi|196186005|gb|EDX80981.1| Asp/Glu/Hydantoin racemase superfamily [Brevundimonas sp. BAL3]
Length = 285
Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 55/282 (19%), Positives = 99/282 (35%), Gaps = 34/282 (12%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL V +++ P+ F+Y+AD PYG + + + +
Sbjct: 2 AIGVFDSGVGGLTVHRELTRRFPQRDFVYLADQAHAPYGGRGGEDIVELTRAGCERLFEA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP---------SMAFLGAVPA-------------IK 112
+ V+ACNTA + L+ T+ + LG + +
Sbjct: 62 GA-SVVVLACNTASAIALRRLQQTWIPGLRERLGRPVNVLGIIVPTIEAATGKPWSFEAE 120
Query: 113 QAAAYTQSGLI---SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
+AA + I + T AT I + LA +E A
Sbjct: 121 RAAEGDKVEAIAVTGVFCTAATAISRVFEIEIDKRREDIAVFSEPCPGLAGLIELGA--- 177
Query: 170 KIKEDEIKKEIEGC---FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
+E+K ++ + G+ D +L CTHY +I +F P ++ ++
Sbjct: 178 --PREELKVVVDDHVDALRRRIGRHPDKAILGCTHYEIIAELFASALPAGTVLINQPTAV 235
Query: 227 ARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
A R + +G+ + Q +G
Sbjct: 236 ADALERYFARHPEFELGDSGRRDFLTTGQAGPQSEMVSQFWG 277
>gi|32265523|ref|NP_859555.1| glutamate racemase [Helicobacter hepaticus ATCC 51449]
gi|32261571|gb|AAP76621.1| glutamate racemase [Helicobacter hepaticus ATCC 51449]
Length = 247
Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 84/254 (33%), Gaps = 14/254 (5%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+ + IY D PYG + + K + + +
Sbjct: 4 GVFDSGVGGLSVLKSLINAKLFEDIIYYGDTARVPYGVKDKQTIIKFSLQAL-EFFTPHN 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL---ISILSTPATLR 133
+ ++ACNT E++ + +G + A I I++T AT+
Sbjct: 63 IDILIVACNTVSAYALQEMQ-KHSKIPIVGVIEPGVLAVQNNLKDTDSEILIIATRATIN 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + ++ +++ + VEE + E +
Sbjct: 122 SGEYETRLRNI-GFWNLKSLATGLFVPIVEEGLLEGAVLESVFHHYFASITTPPQ----- 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTH+PLI + + ++I + ++ F S
Sbjct: 176 AVILGCTHFPLIAPALDSYFNHQSMLIHSGEAIVEYLKN---HLHLTSRYALKSLQFFAS 232
Query: 254 GKPDIAMRRLMQGF 267
+ +
Sbjct: 233 DNTAALTKIANKWL 246
>gi|197693576|gb|ACH71457.1| glutamate racemase [Helicobacter pylori]
gi|197693766|gb|ACH71552.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 206 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L V+ACNTA L +E++ F + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLVVACNTASALALEEMQKHFK-IPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195
>gi|197693664|gb|ACH71501.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 206 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + +I +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+V++L CTH+PLI L
Sbjct: 175 EVVILGCTHFPLIAQKIESYFMEHFALL 202
>gi|126728656|ref|ZP_01744471.1| Glutamate racemase [Sagittula stellata E-37]
gi|126710586|gb|EBA09637.1| Glutamate racemase [Sagittula stellata E-37]
Length = 251
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 89/246 (36%), Gaps = 19/246 (7%)
Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92
+P+ F+Y AD PYG + + + S + D+ L V+ACNTA
Sbjct: 1 MKRLPDVPFVYFADSAHAPYGVRDANDIYDLTTQAVSRLWDEG-CDLVVLACNTASAAAL 59
Query: 93 DELRSTF--PSMAFLGAVPAIKQAAAYTQSG-----------LISILSTPATLRRTYTSN 139
++ ++ LG + +A Q G +++ +TPAT+R
Sbjct: 60 RRMQESWVPRDKRVLGVFVPLIEALTARQWGDNSPPREVGIQHVALFATPATVRSRAFQR 119
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ + + L +EE + + E ++ ++ ++++ + +L C
Sbjct: 120 ELAFRAIGVDVEAQACGGLVDAIEEG--DMILAEALVRSHVDA--LKRKMPTPEAAILGC 175
Query: 200 THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA 259
THYPL+ +F+ V + + L R R +G P
Sbjct: 176 THYPLMQDIFQDALGPDVHVYSQATLVPDSLADYLDRHPDMLGRGTTS-RFLTTGDPARV 234
Query: 260 MRRLMQ 265
R Q
Sbjct: 235 SRHATQ 240
>gi|237752367|ref|ZP_04582847.1| glutamate racemase [Helicobacter winghamensis ATCC BAA-430]
gi|229375856|gb|EEO25947.1| glutamate racemase [Helicobacter winghamensis ATCC BAA-430]
Length = 258
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 16/258 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GG+ VL+ + +Y D PYG +++ + D
Sbjct: 11 QRIGVFDSGAGGISVLKNLIESHNFKEILYYGDTARVPYGVKSKDTIRQYSLEAL-DFFS 69
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPA 130
++ L ++ACNTA ++ P +G + A A ++ I IL T A
Sbjct: 70 PFKLDLLIVACNTASAYGLSAMQEVAP-YPVIGVIEPGILALQNAIQDKNAKILILGTKA 128
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ S L+ + +++ + VEE I + I ++
Sbjct: 129 TICSNLYSKLL-REKGYLNTFGLATSLFVPIVEEGIFEGAILDSTIAHYLKQY-----PS 182
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
+ I+L CTH+PLI + + + ++I L T Q+ +
Sbjct: 183 TPNAIILGCTHFPLIANSIANFYSNKPLLIHSGEAI----MEYLQNFYTLQSFKETPKVK 238
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ S + +
Sbjct: 239 FYASDYVENLEKIANLWL 256
>gi|197693566|gb|ACH71452.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFTLL 202
>gi|197693570|gb|ACH71454.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 205 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQHVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693568|gb|ACH71453.1| glutamate racemase [Helicobacter pylori]
gi|197693714|gb|ACH71526.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693858|gb|ACH71598.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693558|gb|ACH71448.1| glutamate racemase [Helicobacter pylori]
gi|197693586|gb|ACH71462.1| glutamate racemase [Helicobacter pylori]
gi|197693614|gb|ACH71476.1| glutamate racemase [Helicobacter pylori]
gi|197693616|gb|ACH71477.1| glutamate racemase [Helicobacter pylori]
gi|197693620|gb|ACH71479.1| glutamate racemase [Helicobacter pylori]
gi|197693768|gb|ACH71553.1| glutamate racemase [Helicobacter pylori]
gi|197693770|gb|ACH71554.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L V+ACNTA L +E++ F + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLVVACNTASALALEEMQKHFK-IPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195
>gi|197693644|gb|ACH71491.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|224437846|ref|ZP_03658793.1| glutamate racemase [Helicobacter cinaedi CCUG 18818]
gi|313144294|ref|ZP_07806487.1| glutamate racemase [Helicobacter cinaedi CCUG 18818]
gi|313129325|gb|EFR46942.1| glutamate racemase [Helicobacter cinaedi CCUG 18818]
Length = 246
Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 14/254 (5%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSGIGGL VL+ + IY D PYG + + + + D +
Sbjct: 4 GVFDSGIGGLSVLKSLINAKLFDEIIYYGDTARVPYGVKDKQTIIRFSLEAL-DFFKPHN 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL---ISILSTPATLR 133
+ ++ACNT +E++ + +G + A I IL+T AT+
Sbjct: 63 IDILIVACNTVSAYALEEMQ-KHSKIPIVGVIEPGVLAVQNKLKDTDSEILILATRATIN 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ ++ +++ + VEE + E +G
Sbjct: 122 SGEYETRLRKI-GFWNLKSLATGLFVPLVEEGLLEGAVLESVFDYYFSNFTNPPKG---- 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
I+L CTH+PLI + + ++I L + F S
Sbjct: 177 -IILGCTHFPLIADALSAYFNNQSVLIHSGEAIVEYLETHLQLRTQY---PLKSLQFFAS 232
Query: 254 GKPDIAMRRLMQGF 267
+ +
Sbjct: 233 DNTASLTKIAQKWL 246
>gi|24113787|ref|NP_708297.1| glutamate racemase [Shigella flexneri 2a str. 301]
gi|24052869|gb|AAN44004.1| similar to glutamate racemase [Shigella flexneri 2a str. 301]
gi|281601863|gb|ADA74847.1| glutamate racemase [Shigella flexneri 2002017]
gi|332766260|gb|EGJ96470.1| glutamate racemase [Shigella flexneri 2930-71]
Length = 273
Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 10/251 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL ++++ L+P IY D++ PYGN + + + +
Sbjct: 8 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFL 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L +ACNT + ++ E +FP L + + Q + I++
Sbjct: 68 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ LI S ++ S LA +EE ++IKK + I
Sbjct: 126 TEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 184
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
I+L CTHYP++ + F ++P + +++ + A + L ++N +
Sbjct: 185 HPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 241
Query: 248 HALFLSGKPDI 258
+ SG +I
Sbjct: 242 LQINTSGSMEI 252
>gi|197693862|gb|ACH71600.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPATIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693626|gb|ACH71482.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|217077581|ref|YP_002335299.1| glutamate racemase [Thermosipho africanus TCF52B]
gi|217037436|gb|ACJ75958.1| glutamate racemase [Thermosipho africanus TCF52B]
Length = 263
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 116/253 (45%), Gaps = 28/253 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG+ VL+K+ ++ H+IY+AD PYG + + +F F++ K
Sbjct: 3 IGLFDSGIGGISVLKKLTYIN-GAHYIYIADTERAPYGIKTPE-VLESFIFEFAEFFHKK 60
Query: 76 QPVLSVIACNTAFTLIKD---ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
ACNT ++I + +L + S+ IK A +S + ++ T T+
Sbjct: 61 GVNEIFAACNTTDSIILEKNLDLGIKYNSI--------IKAAIQAPKSEKVGVIGTNITV 112
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + ++ S+ + S VEE ++ ++ + + K
Sbjct: 113 SNGIYKKYLEMENKE--VYQKSTQLFVSLVEEGIFYGRM----VEAIANYYLLPLKKKNI 166
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ ++L CTH+P + V ++ P V +D ++ ++++ L + N+ + V ++
Sbjct: 167 EELILGCTHFPFLKGVISRVLP-KVRIIDPAEELSKK----LAKNNSKKAFV----EFYV 217
Query: 253 SGKPDIAMRRLMQ 265
+G P + ++L +
Sbjct: 218 TGDPKVFEKKLKR 230
>gi|333001587|gb|EGK21155.1| glutamate racemase [Shigella flexneri VA-6]
Length = 269
Score = 204 bits (521), Expect = 8e-51, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 10/251 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL ++++ L+P IY D++ PYGN + + + +
Sbjct: 4 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFL 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L +ACNT + ++ E +FP L + + Q + I++
Sbjct: 64 QSR-NVKLVAVACNTISSTLESEKYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 121
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ LI S ++ S LA +EE ++IKK + I
Sbjct: 122 TEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 180
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
I+L CTHYP++ + F ++P + +++ + A + L ++N +
Sbjct: 181 HPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 237
Query: 248 HALFLSGKPDI 258
+ SG +I
Sbjct: 238 LQINTSGSMEI 248
>gi|313650908|gb|EFS15308.1| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|332755494|gb|EGJ85858.1| glutamate racemase [Shigella flexneri K-671]
gi|333001965|gb|EGK21531.1| glutamate racemase [Shigella flexneri K-218]
Length = 269
Score = 204 bits (521), Expect = 8e-51, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 10/251 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL ++++ L+P IY D++ PYGN + + + +
Sbjct: 4 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLTFL 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L +ACNT + ++ E +FP L + + Q + I++
Sbjct: 64 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 121
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ LI S ++ S LA +EE ++IKK + I
Sbjct: 122 TEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 180
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
I+L CTHYP++ + F ++P + +++ + A + L ++N +
Sbjct: 181 HPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 237
Query: 248 HALFLSGKPDI 258
+ SG +I
Sbjct: 238 LQINTSGSMEI 248
>gi|197693548|gb|ACH71443.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 204 bits (521), Expect = 8e-51, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARQIESYF 195
>gi|300025005|ref|YP_003757616.1| glutamate racemase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526826|gb|ADJ25295.1| Glutamate racemase [Hyphomicrobium denitrificans ATCC 51888]
Length = 281
Score = 204 bits (521), Expect = 9e-51, Method: Composition-based stats.
Identities = 60/262 (22%), Positives = 98/262 (37%), Gaps = 23/262 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + F+Y+AD PYGN A+ D+ +
Sbjct: 2 IGVFDSGLGGLTVLRVLTQRFKAADFVYLADHAHVPYGNRPSDAIVGYTRDCVEDLFARG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-------PSMAFLGAVPAIKQAAAYT---------- 118
L ++ CNTA + L+ + + LG V +AA T
Sbjct: 62 A-KLVLLGCNTATAVALRRLQQEWLPRSPWAGTHNVLGIVAPTVEAATQTPWAVTSPQYP 120
Query: 119 ---QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ I + T T+ I + + LA +EE + E+
Sbjct: 121 QKYNTDTIGVFGTTRTVTAGVYPEEIGKRCPKVTVVQQICSELAGAIEEKQPEAHL-EEL 179
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
++ I G + +G +L CTH+PL+ H+FR+ P L + ++ L
Sbjct: 180 VRAGITGLLDQTDGVPPHRAILGCTHFPLVEHLFRKHLPPFTRILSQPEVVSDSFEDYLA 239
Query: 236 RI-NTHQTRVFDDHALFLSGKP 256
R + L +G P
Sbjct: 240 RRSHYLNGDESGSLTLLTTGDP 261
>gi|197693716|gb|ACH71527.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 204 bits (521), Expect = 9e-51, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693628|gb|ACH71483.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 204 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKNKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + +I +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+V++L CTH+PLI
Sbjct: 175 EVVILGCTHFPLIAQKIESYF 195
>gi|33433444|gb|AAP39989.2| glutamate racemase [Helicobacter acinonychis]
Length = 255
Score = 204 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 97/261 (37%), Gaps = 19/261 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FD+G+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDTGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDSATIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132
+ L ++ACNTA L + ++ + +G + A ++ I +L T AT+
Sbjct: 62 EIELLIVACNTASALALETMQ-KHSKIPIVGVIEPSILAIKQHVKDKNTPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFAPLKIFP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIESYFVEHFILSKTPLLIHSGDAIVEYLQQ--KYALKKNVYAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KIEFHASGDVIWLEKQAKEWL 253
>gi|10955413|ref|NP_053125.1| hypothetical protein pB171_063 [Escherichia coli]
gi|6009439|dbj|BAA84898.1| orf63 [Escherichia coli]
Length = 273
Score = 204 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 10/251 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL ++++ L+P IY D+ PYGN + + + +
Sbjct: 8 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFL 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L +ACNT + ++ E +FP L + + Q + I++
Sbjct: 68 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ LI +I S LA +EE ++IKK + I
Sbjct: 126 TEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 184
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
I+L CTHYP++ ++F ++P + +++ + A + L ++N +
Sbjct: 185 HPVN--EIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 241
Query: 248 HALFLSGKPDI 258
+ SG +I
Sbjct: 242 LQINTSGSMEI 252
>gi|197693560|gb|ACH71449.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|116327584|ref|YP_797304.1| glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116331805|ref|YP_801523.1| glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|122280458|sp|Q04QQ5|MURI_LEPBJ RecName: Full=Glutamate racemase
gi|122284619|sp|Q053X4|MURI_LEPBL RecName: Full=Glutamate racemase
gi|116120328|gb|ABJ78371.1| Glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116125494|gb|ABJ76765.1| Glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 258
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 14/264 (5%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ I + DSG+GGL VL+ + E +Y D PYG E + + + +
Sbjct: 1 MKGPLKIGLMDSGMGGLSVLKGILKYDAELEVVYYGDLKNSPYGEKETSEILELVRDVCK 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ ++ ++ACNTA + LR F S+ G PAIK A I++L+TP
Sbjct: 61 RLQEE-NVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKIALLATP 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T R L ++ I VS LA V++ DE +K + +
Sbjct: 119 VTQREKKLQRLKAELGAEELILPVSCPGLAGLVDKGEF------DEAEKYLRPILKKLRE 172
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFD 246
+ + +VL CTHY + H+ + P V D + + L R++ +
Sbjct: 173 ENVENLVLGCTHYIFLKHIILKNFP-NVRIYDGNSGTIKHLLNSLQVRQRVSNRSSVSGS 231
Query: 247 DHALFLSGKPDIAMRRLMQGFGLK 270
+ L L+ ++ R + +
Sbjct: 232 VYKLILNSDEELHFRLATELLQFE 255
>gi|190014952|ref|YP_001965464.1| Putative glutamate racemase [Escherichia coli]
gi|109389673|gb|ABG29592.1| Putative glutamate racemase [Escherichia coli]
Length = 273
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 10/251 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL ++++ L+P IY D+ PYGN + + + +
Sbjct: 8 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFL 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L +ACNT + ++ E +FP L + + Q + I++
Sbjct: 68 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ LI +I S LA +EE ++IKK + I
Sbjct: 126 TEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 184
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ I+L CTHYP++ ++F ++P + +++ + A + L ++N +
Sbjct: 185 HP--VNEIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 241
Query: 248 HALFLSGKPDI 258
+ SG +I
Sbjct: 242 LQINTSGSMEI 252
>gi|194430317|ref|ZP_03062810.1| glutamate racemase [Escherichia coli B171]
gi|194411647|gb|EDX27976.1| glutamate racemase [Escherichia coli B171]
Length = 269
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 10/251 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL ++++ L+P IY D+ PYGN + + + +
Sbjct: 4 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFL 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L +ACNT + ++ E +FP L + + Q + I++
Sbjct: 64 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 121
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ LI +I S LA +EE ++IKK + I
Sbjct: 122 TEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 180
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
I+L CTHYP++ ++F ++P + +++ + A + L ++N +
Sbjct: 181 HPVN--EIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 237
Query: 248 HALFLSGKPDI 258
+ SG +I
Sbjct: 238 LQINTSGSMEI 248
>gi|197693800|gb|ACH71569.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEG-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIESYF 195
>gi|215276268|ref|YP_002332231.1| putative glutamate racemase [Escherichia coli O127:H6 str.
E2348/69]
gi|312964743|ref|ZP_07778984.1| glutamate racemase [Escherichia coli 2362-75]
gi|215267864|emb|CAS07533.1| putative glutamate racemase [Escherichia coli O127:H6 str.
E2348/69]
gi|312290592|gb|EFR18471.1| glutamate racemase [Escherichia coli 2362-75]
Length = 269
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 10/251 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL ++++ L+P IY D+ PYGN + + + +
Sbjct: 4 AESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLTFL 63
Query: 72 LDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L +ACNT + ++ E +FP L + + Q + I++
Sbjct: 64 QSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPILSIIEPAVEDVIRQQYKNVGIIA 121
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ LI +I S LA +EE ++IKK + I
Sbjct: 122 TEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHV-NHLISL 180
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
I+L CTHYP++ ++F ++P + +++ + A + L ++N +
Sbjct: 181 HPVN--EIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGT 237
Query: 248 HALFLSGKPDI 258
+ SG +I
Sbjct: 238 LQINTSGSMEI 248
>gi|197693704|gb|ACH71521.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693650|gb|ACH71494.1| glutamate racemase [Helicobacter pylori]
gi|197693652|gb|ACH71495.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195
>gi|197693758|gb|ACH71548.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|197693720|gb|ACH71529.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693624|gb|ACH71481.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ F + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHFK-IPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVVHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI
Sbjct: 175 EVVILGCTHFPLIARQIEGYFMEHFAL 201
>gi|197693612|gb|ACH71475.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+V++L CTH+PLI
Sbjct: 175 EVVILGCTHFPLIAQKIEGYF 195
>gi|197693698|gb|ACH71518.1| glutamate racemase [Helicobacter pylori]
gi|197693700|gb|ACH71519.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693606|gb|ACH71472.1| glutamate racemase [Helicobacter pylori]
gi|197693760|gb|ACH71549.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|197693872|gb|ACH71605.1| glutamate racemase [Helicobacter pylori]
gi|197693874|gb|ACH71606.1| glutamate racemase [Helicobacter pylori]
gi|197693876|gb|ACH71607.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI H
Sbjct: 175 EVIILGCTHFPLIAHQIEGYF 195
>gi|197693666|gb|ACH71502.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVANKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI H
Sbjct: 175 EVIILGCTHFPLIAHQIEGYF 195
>gi|197693860|gb|ACH71599.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKRQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693816|gb|ACH71577.1| glutamate racemase [Helicobacter pylori]
gi|197693818|gb|ACH71578.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693722|gb|ACH71530.1| glutamate racemase [Helicobacter pylori]
gi|197693724|gb|ACH71531.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + + +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALNFF-KPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693772|gb|ACH71555.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ F + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQKHFK-IPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195
>gi|197693864|gb|ACH71601.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693646|gb|ACH71492.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPATIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|144898237|emb|CAM75101.1| Asp/Glu racemase [Magnetospirillum gryphiswaldense MSR-1]
Length = 198
Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ +R +P IY+ D PYG A+ + ++ +
Sbjct: 8 PIGVFDSGVGGLTVLKALRERLPAESLIYLGDTARLPYGTKSAAAVSHYALQAAHALV-R 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
V+A NT+ + LR+ FP + G V P AA + G I +++T +T++
Sbjct: 67 MGIKALVVADNTSSAHALEALRAEFPGLPVTGVVEPGAAAAALASAQGRIVVIATDSTVQ 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
IH+ + + + S VEE I E + ++ F + +
Sbjct: 127 AGTYPRAIHNSRPGARVISKACPLFVSMVEEGMTDGPIAEQLARHYLDPLFANADEDK 184
>gi|197693706|gb|ACH71522.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693670|gb|ACH71504.1| glutamate racemase [Helicobacter pylori]
gi|197693672|gb|ACH71505.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|30961743|gb|AAP39988.1| glutamate racemase [Helicobacter acinonychis]
Length = 232
Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 90/226 (39%), Gaps = 17/226 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FD+G+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDTGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDSATIKQFSLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132
+ L ++ACNTA L + ++ + +G + A ++ I +L T AT+
Sbjct: 62 EIELLIVACNTASALALETMQ-KHSKIPIVGVIEPSILAIKQHVKDKNTPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + N + ++ +++ + +EE + E E+ + +
Sbjct: 121 RSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----VLEGELLETCMRYYFAPLKIFP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARC 232
+VI+L CTH+PLI + + D+I +
Sbjct: 175 EVIILGCTHFPLIAQKIESYFVEHFALSTPPLLIHSGDAIVEYLQQ 220
>gi|197693868|gb|ACH71603.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKEKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693738|gb|ACH71538.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKR-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARKIEGYF 195
>gi|197693630|gb|ACH71484.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195
>gi|197693848|gb|ACH71593.1| glutamate racemase [Helicobacter pylori]
gi|197693850|gb|ACH71594.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693712|gb|ACH71525.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693832|gb|ACH71585.1| glutamate racemase [Helicobacter pylori]
gi|197693834|gb|ACH71586.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI H
Sbjct: 175 EVIILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693806|gb|ACH71572.1| glutamate racemase [Helicobacter pylori]
gi|197693808|gb|ACH71573.1| glutamate racemase [Helicobacter pylori]
gi|197693810|gb|ACH71574.1| glutamate racemase [Helicobacter pylori]
gi|197693812|gb|ACH71575.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693588|gb|ACH71463.1| glutamate racemase [Helicobacter pylori]
gi|197693852|gb|ACH71595.1| glutamate racemase [Helicobacter pylori]
gi|197693854|gb|ACH71596.1| glutamate racemase [Helicobacter pylori]
gi|197693856|gb|ACH71597.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693718|gb|ACH71528.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI
Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|258645749|ref|ZP_05733218.1| glutamate racemase [Dialister invisus DSM 15470]
gi|260403118|gb|EEW96665.1| glutamate racemase [Dialister invisus DSM 15470]
Length = 258
Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 61/272 (22%), Positives = 105/272 (38%), Gaps = 27/272 (9%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL V ++ P FI++ D PYGN +
Sbjct: 1 MDNRP--------IGIMDSGVGGLTVACVLKEKYPNEKFIFIGDTARNPYGNKSPEEVT- 51
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA---VPAIKQAAAYTQ 119
L Q + + ACNT + + +G P ++
Sbjct: 52 FFAEEMKAFLAGKQVKMIIAACNTITFSVPPSFFE--GKIPVIGMSLDFPELESV----- 104
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
++++ TP T+R + ++ + LA +E + +E I +
Sbjct: 105 -NHLAVIGTPMTIRSHRHRERLKKDFPLMNVTEIPIDGLAYAIE-----MGKEESFIYRM 158
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
I + + D VLACTHYPL+ VFR + P + +D ++ ++A +L N
Sbjct: 159 INKAVQKAGAESVDAAVLACTHYPLVAGVFRDILPNTL-LIDPAERTVKKAMSILADQN- 216
Query: 240 HQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
Q+ F + A + + FG ++
Sbjct: 217 GQSEEAGPCLFFFTESTLRAEILVKKMFGRRA 248
>gi|197693564|gb|ACH71451.1| glutamate racemase [Helicobacter pylori]
gi|197693744|gb|ACH71541.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVEDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|77412365|ref|ZP_00788676.1| glutamate racemase [Streptococcus agalactiae CJB111]
gi|77161585|gb|EAO72585.1| glutamate racemase [Streptococcus agalactiae CJB111]
Length = 159
Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D+ P I DSG+GGL V+++M +PE I++ D PYG +++
Sbjct: 1 MDSRP--------IGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG 121
+ + +L K + VIACNTA + E++ + LG + P A T SG
Sbjct: 53 FTWQMVNFLLTK-NVKMIVIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNSG 110
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167
+ I+ TP T++ I + + ++ VE C
Sbjct: 111 KVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESIRC 156
>gi|197693804|gb|ACH71571.1| glutamate racemase [Helicobacter pylori]
gi|197693836|gb|ACH71587.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVANKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
VI+L CTH+PLI
Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195
>gi|197693550|gb|ACH71444.1| glutamate racemase [Helicobacter pylori]
gi|197693776|gb|ACH71557.1| glutamate racemase [Helicobacter pylori]
gi|197693778|gb|ACH71558.1| glutamate racemase [Helicobacter pylori]
gi|197693780|gb|ACH71559.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFAPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195
>gi|197693728|gb|ACH71533.1| glutamate racemase [Helicobacter pylori]
gi|197693866|gb|ACH71602.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693574|gb|ACH71456.1| glutamate racemase [Helicobacter pylori]
gi|197693740|gb|ACH71539.1| glutamate racemase [Helicobacter pylori]
gi|197693742|gb|ACH71540.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFGEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+V++L CTH+PLI
Sbjct: 175 EVVILGCTHFPLIAQKIEGYF 195
>gi|197693634|gb|ACH71486.1| glutamate racemase [Helicobacter pylori]
gi|197693636|gb|ACH71487.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+V++L CTH+PLI
Sbjct: 175 EVVILGCTHFPLIAQKIEGYF 195
>gi|197693552|gb|ACH71445.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+V++L CTH+PLI
Sbjct: 175 EVVILGCTHFPLIAQKIEGYF 195
>gi|197693632|gb|ACH71485.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|197693684|gb|ACH71511.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693796|gb|ACH71567.1| glutamate racemase [Helicobacter pylori]
gi|197693798|gb|ACH71568.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|197693638|gb|ACH71488.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARRIEGYF 195
>gi|197693710|gb|ACH71524.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE G E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGG-----ELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693610|gb|ACH71474.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693608|gb|ACH71473.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI
Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693702|gb|ACH71520.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693676|gb|ACH71507.1| glutamate racemase [Helicobacter pylori]
gi|197693678|gb|ACH71508.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (513), Expect = 7e-50, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693682|gb|ACH71510.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (513), Expect = 7e-50, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQIKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693708|gb|ACH71523.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNTPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693546|gb|ACH71442.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|197693764|gb|ACH71551.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI H
Sbjct: 175 EVIILGCTHFPLIAHQIEGYF 195
>gi|197693594|gb|ACH71466.1| glutamate racemase [Helicobacter pylori]
gi|197693596|gb|ACH71467.1| glutamate racemase [Helicobacter pylori]
gi|197693822|gb|ACH71580.1| glutamate racemase [Helicobacter pylori]
gi|197693824|gb|ACH71581.1| glutamate racemase [Helicobacter pylori]
gi|197693826|gb|ACH71582.1| glutamate racemase [Helicobacter pylori]
gi|197693828|gb|ACH71583.1| glutamate racemase [Helicobacter pylori]
gi|197693830|gb|ACH71584.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI H
Sbjct: 175 EVIILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693820|gb|ACH71579.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693754|gb|ACH71546.1| glutamate racemase [Helicobacter pylori]
gi|197693756|gb|ACH71547.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|197693600|gb|ACH71469.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693870|gb|ACH71604.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDKALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|325956149|ref|YP_004286759.1| glutamate racemase [Lactobacillus acidophilus 30SC]
gi|325332714|gb|ADZ06622.1| glutamate racemase [Lactobacillus acidophilus 30SC]
gi|327182953|gb|AEA31400.1| glutamate racemase [Lactobacillus amylovorus GRL 1118]
Length = 268
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 93/243 (38%), Gaps = 11/243 (4%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
+ +K+ +P +++ D+ PYGN + +L L + ACNTA
Sbjct: 18 IAKKVIEKLPNESTVFIGDNAHMPYGNRTKEDIINLTRRSVKFLL-NNDVKLVIFACNTA 76
Query: 88 FTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
+ +G + A+ T++ +++++T T+ IH
Sbjct: 77 TAAAMGTIEKEI-EPQIIGVIQSGALAASRTTKNKKVAVVATSVTVGSHAYEKEIHFRDP 135
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ + +++ LA VE K ++ +GK D +VL CTHYPLI
Sbjct: 136 EIEVTELATPKLAPLVEAQEE-----HATNLKVVKESLAPLKGKDFDTLVLGCTHYPLIE 190
Query: 207 HVFRQLS-PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALFLSGKPDIAMRRLM 264
F++ V LD +D +A+ ++ R H + +G + +L
Sbjct: 191 QEFKEAIDDENVTILDPADQVAQYTFNVMRRDGLFSEEGHKPVHEYYTTGN-STSFDKLA 249
Query: 265 QGF 267
+ F
Sbjct: 250 RTF 252
>gi|197693690|gb|ACH71514.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPVVGVIGPSILAIKQQVK-NKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693648|gb|ACH71493.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
VI+L CTH+PLI
Sbjct: 175 KVIILGCTHFPLIAQKIEGYF 195
>gi|197693668|gb|ACH71503.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHXIEGYFMEHFAL 201
>gi|197693746|gb|ACH71542.1| glutamate racemase [Helicobacter pylori]
gi|197693748|gb|ACH71543.1| glutamate racemase [Helicobacter pylori]
gi|197693750|gb|ACH71544.1| glutamate racemase [Helicobacter pylori]
gi|197693752|gb|ACH71545.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A + I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKKAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + + +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLSVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|197693674|gb|ACH71506.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVED-KNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693686|gb|ACH71512.1| glutamate racemase [Helicobacter pylori]
gi|197693688|gb|ACH71513.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693762|gb|ACH71550.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI H
Sbjct: 175 EVIILGCTHFPLIAHRIEGYF 195
>gi|197693734|gb|ACH71536.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693622|gb|ACH71480.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693654|gb|ACH71496.1| glutamate racemase [Helicobacter pylori]
gi|197693656|gb|ACH71497.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 EIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLEACMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALL 202
>gi|288921254|ref|ZP_06415538.1| glutamate racemase [Frankia sp. EUN1f]
gi|288347344|gb|EFC81637.1| glutamate racemase [Frankia sp. EUN1f]
Length = 277
Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 95/255 (37%), Gaps = 9/255 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG V + + +P +++ + PYG ++ + +
Sbjct: 4 APIGVFDSGVGGRTVARAIGDRLPARPLLHLGETANAPYGPQPGAEVRPPAPAVLDQPVA 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIA N+A + R + VP +A A T+SG + ++ T AT
Sbjct: 64 AG-VKLLVIAGNSAGAACLRDARERYDVPVVEVIVPTTCRAVAATRSGRVGVVGTVATNA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + S + V+ + V E + E+ E + D
Sbjct: 123 SRAYEDAFSA-ASGTELVSVACPAFGAFVVEGITSGR----ELLGLTEAYRAPLQEADVD 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALF 251
++L CT YPL+ V + V + +++ + +L R + H L
Sbjct: 178 TVILGCTRYPLLTGVTGLVPGEGVTLVRSAEETSEATDRVLARDGRFRDPDLPPPAHRLP 237
Query: 252 LSGKPDIA-MRRLMQ 265
G P + RRL Q
Sbjct: 238 APGAPAASRTRRLRQ 252
>gi|197693658|gb|ACH71498.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE G E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGG-----ELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALL 202
>gi|197693694|gb|ACH71516.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYGNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693580|gb|ACH71459.1| glutamate racemase [Helicobacter pylori]
gi|197693696|gb|ACH71517.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693640|gb|ACH71489.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMHYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAXKIEGYF 195
>gi|197693794|gb|ACH71566.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|197693592|gb|ACH71465.1| glutamate racemase [Helicobacter pylori]
gi|197693838|gb|ACH71588.1| glutamate racemase [Helicobacter pylori]
gi|197693840|gb|ACH71589.1| glutamate racemase [Helicobacter pylori]
gi|197693842|gb|ACH71590.1| glutamate racemase [Helicobacter pylori]
gi|197693844|gb|ACH71591.1| glutamate racemase [Helicobacter pylori]
gi|197693846|gb|ACH71592.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|197693642|gb|ACH71490.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|291059797|gb|ADD72532.1| glutamate racemase [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 311
Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 15/274 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + + ++ Q + DSGIGGL +R +PE +YVAD V FPYGN +
Sbjct: 42 MSMSDR--REQFQYA--FLDSGIGGLPYAHALRVRVPEASLVYVADRVYFPYGNKSSAQI 97
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
R + + + P + V+ACN+ + LR+ VPAIKQA A +
Sbjct: 98 IARASAVLQKVQTNFSPHIVVLACNSMSVNALEFLRAQVSVPVVG-VVPAIKQAVACSHK 156
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L+T T+ YT+ L + + C + + L +E I ED ++ +
Sbjct: 157 KHIGVLATQCTITHPYTACLRAQFGAGCVFQMRADARLIECLERGL--IFEVEDMQREAV 214
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + DV+VLACTH+ + H+F+ +D+ + + RR L P
Sbjct: 215 ARSVMPFQEAGVDVLVLACTHFVHVRHLFQDCVGTSCTVVDSLEGVVRRTLRLCP----P 270
Query: 241 QTRVFDDHALFLSGKPDIA----MRRLMQGFGLK 270
Q+++ + A +++G D R Q FGL+
Sbjct: 271 QSQLRGNAACYVTGARDAVCAARYARYAQHFGLR 304
>gi|197693584|gb|ACH71461.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + S +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVSLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|197693726|gb|ACH71532.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T A +
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAMI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693598|gb|ACH71468.1| glutamate racemase [Helicobacter pylori]
gi|197693774|gb|ACH71556.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195
>gi|213420373|ref|ZP_03353439.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 156
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 60/156 (38%), Positives = 94/156 (60%), Gaps = 1/156 (0%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
T LI + ++C I ++ S L E G +
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVS 156
>gi|56459706|ref|YP_154987.1| glutamate racemase [Idiomarina loihiensis L2TR]
gi|56178716|gb|AAV81438.1| Glutamate racemase [Idiomarina loihiensis L2TR]
Length = 248
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 102/259 (39%), Gaps = 18/259 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL V + ++ +Y D PYG+ + + + + + + +
Sbjct: 3 VGVFDSGVGGLTVARSLQQSGCFSELLYYGDTARVPYGSKDSNTVTRYALEAV-EFFNGA 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ----SGLISILSTPAT 131
V+ACNT ++++ F + G + A Q S + +++T +T
Sbjct: 62 DVDCLVVACNTVSVTALEQMQ-KFSNKPVYGVLEPGVMALEQLQGIDTSAQVLVIATRST 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + ++ +++ + VEE I ++ K + ++
Sbjct: 121 INSGAYQQQIQALGYN-QVNAMATPLFVPIVEEELYDGPILQETFKHYF------GKLEK 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV++L CTH+PLI + + +++ L ++ +
Sbjct: 174 PDVVLLGCTHFPLIAESISAYF-NGAKTIHSGEAM---LAWLKQHLDLSAQFDRTPLHII 229
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+ D A++R +GLK
Sbjct: 230 ATENVD-AVKRTATRWGLK 247
>gi|197693692|gb|ACH71515.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+
Sbjct: 62 KIGLLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693590|gb|ACH71464.1| glutamate racemase [Helicobacter pylori]
gi|197693782|gb|ACH71560.1| glutamate racemase [Helicobacter pylori]
gi|197693784|gb|ACH71561.1| glutamate racemase [Helicobacter pylori]
gi|197693786|gb|ACH71562.1| glutamate racemase [Helicobacter pylori]
gi|197693788|gb|ACH71563.1| glutamate racemase [Helicobacter pylori]
gi|197693790|gb|ACH71564.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFAPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
VI+L CTH+PLI
Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195
>gi|197693660|gb|ACH71499.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE G E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGG-----ELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALL 202
>gi|197693578|gb|ACH71458.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFAPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
VI+L CTH+PLI
Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195
>gi|197693730|gb|ACH71534.1| glutamate racemase [Helicobacter pylori]
gi|197693732|gb|ACH71535.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 199 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQIKD-KNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693736|gb|ACH71537.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 199 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D Y
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPY 61
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQIKD-KNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|46200986|ref|ZP_00055981.2| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1]
Length = 243
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 8/237 (3%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MP+ +Y+ D PYG + + + +++K V+ACNTA + D +
Sbjct: 1 MPDEQLLYLGDVARQPYGTKSPRTVTRYAVQAAEFLVEKG-IKALVVACNTASAVALDAI 59
Query: 96 RSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
FP + LG V A AA + G I + +T T R I + V
Sbjct: 60 EQRFPGLPVLGVVEAGADGAARASPQGRIVVAATEGTCRSEAYERAIARRRGGAQVRCVP 119
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ + EE I E + + F +G D +VL CTH+PL+ +L+
Sbjct: 120 CPLFVALAEEGLTDGPIVESVARHYLGSLFDGSQGG--DCLVLGCTHFPLLAPALARLAG 177
Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMR---RLMQGFG 268
V +D +++ + LL + L + P+ R RL G
Sbjct: 178 PGVTLVDCAEATSAMLVRLLAGREAPRGN-GGGLRLISTDAPERFARMAGRLFPSLG 233
>gi|197693562|gb|ACH71450.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L V+ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLVVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFAPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
VI+L CTH+PLI
Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195
>gi|197693572|gb|ACH71455.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFNEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARQIEGYF 195
>gi|150021250|ref|YP_001306604.1| glutamate racemase [Thermosipho melanesiensis BI429]
gi|149793771|gb|ABR31219.1| glutamate racemase [Thermosipho melanesiensis BI429]
Length = 263
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 55/253 (21%), Positives = 110/253 (43%), Gaps = 28/253 (11%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG+ VL+K+ ++ H+IY+AD PYG AL+ + K
Sbjct: 3 IGLFDSGIGGISVLKKLTYIN-GAHYIYIADTERAPYGLRTSEALESFVWEFVDFFHKKK 61
Query: 76 QPVLSVIACNTAFTLIKD---ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ ACNT ++I + +L + S+ I+ + +S + ++ T T+
Sbjct: 62 VNEIF-AACNTTDSIILENNLDLVIKYNSI--------IRAGVSAAKSSKVGVIGTNVTI 112
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + V ++ ++ + S VEE ++ ++ + + +
Sbjct: 113 KNGSYRRYLE--VEGKEVYQKATQLFVSLVEEGVFYGRM----VEAIANYYLLPLKKENV 166
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
++L CTH+P + + ++ P V +D ++ LL + NT + V ++
Sbjct: 167 KELILGCTHFPFLKGIISRVLP-KVRIIDPAEE----LSKLLVKNNTRRPFV----EFYV 217
Query: 253 SGKPDIAMRRLMQ 265
+G P R+L +
Sbjct: 218 TGDPKEFERKLKR 230
>gi|197693802|gb|ACH71570.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE G ++ E ++ I +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGGELLETCMRYYFTPLKILPK---- 175
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
VI+L CTH+PLI
Sbjct: 176 -VIILGCTHFPLIARQIEGYF 195
>gi|30961747|gb|AAP39990.1| glutamate racemase [Helicobacter acinonychis]
Length = 232
Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 17/226 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FD+G+GG VL+ + + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDTGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDSATIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132
+ L ++ACNTA L + ++ + +G + A ++ I +L T AT+
Sbjct: 62 EIELLIVACNTASALALETMQ-KHSKIPIVGVIEPSILAIKQHVKDKNTPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFAPLKIFP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARC 232
+VI+L CTH+PLI + + D+I +
Sbjct: 175 EVIILGCTHFPLIAQKIESYFVEHFILSKTPLLIHSGDAIVEYLQQ 220
>gi|7415851|dbj|BAA93558.1| glutamate racemase [Escherichia coli O157:H7]
Length = 209
Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 4/200 (2%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 5 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 63
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 64 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEP--P 121
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 122 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 181
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 182 AMTPEAEQLLPVLQRYGFET 201
>gi|206901151|ref|YP_002251063.1| glutamate racemase [Dictyoglomus thermophilum H-6-12]
gi|206740254|gb|ACI19312.1| glutamate racemase [Dictyoglomus thermophilum H-6-12]
Length = 266
Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 12/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I I DSG+GGL VL+++ F ++ D FPYG +++R+ + S
Sbjct: 2 SKIGILDSGVGGLSVLKEVYFNNLADEVYFLGDTKYFPYGIKPVEFIQERVFEIVSFF-K 60
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ ++ACNTA ++ D L F + V + + +L+T T
Sbjct: 61 NFGVEEVIVACNTASSVAYDFLVDNFRDIKIHSIVLGAIEGIKSYTFKKVGVLATKRTKE 120
Query: 134 RTYTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
NLIH +++ S +E GI ++ + I+KEI C
Sbjct: 121 SNIYPNLIHERISKNVEVYVQSCSE-GPLLETIEKGI-VEGEIIEKEIIKCTDPLVENGI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ ++L CTH P I V + L P + +D S + R L + N+ + + +F+
Sbjct: 179 EGLILGCTHLPFIKGVIKNLYP-NLFIVDPSLEVVR----FLSKTNSIDEK---NVEIFV 230
Query: 253 SGKPDIAMRRLMQGFG 268
+G+ + L + G
Sbjct: 231 TGEAEEFQAILNKLLG 246
>gi|87118931|ref|ZP_01074829.1| Glutamate racemase [Marinomonas sp. MED121]
gi|86165322|gb|EAQ66589.1| Glutamate racemase [Marinomonas sp. MED121]
Length = 290
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 15/268 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ + ++ I I DSG GGL VL + Y + Y ADD PYG+ +++
Sbjct: 1 MSEIKVDSGVRPKIGILDSGAGGLTVLAALIKSNKAYDYYYFADDAFAPYGSLSIDKIQQ 60
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA----FLGAVPAIKQAAAYT 118
R++ + ++DK L VIACNTA + +RS + +G PAIK A+
Sbjct: 61 RVLSICDFLIDKGVTSL-VIACNTATLEVIHLVRSCPKVIEKNILIVGIEPAIKPASLLD 119
Query: 119 QSGLISILSTPATLRRTYTSNLI-----HSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
G++ +L+TP T + LI + H ++S +LA+ ++ +
Sbjct: 120 YQGVVCVLATPITCQSNRLQALINHASLNRVSQSSRYHCIASEVLANAIDALPGSGSRVD 179
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E+++ I E + + ++VLACTHYPLI +F L +PV L+ SD++ARR
Sbjct: 180 LELQR-IRAIMAELDSR---ILVLACTHYPLIKSMFEGLFDYPVQILEPSDAVARRVIDC 235
Query: 234 LPRINTHQTRVFDDHALFLSGKPDIAMR 261
LP ++ +L+ SG + R
Sbjct: 236 LPSMHLG-GHESLSVSLYSSGDNQMESR 262
>gi|254468115|ref|ZP_05081521.1| glutamate racemase [beta proteobacterium KB13]
gi|207086925|gb|EDZ64208.1| glutamate racemase [beta proteobacterium KB13]
Length = 263
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 10/251 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I+IFDSG+GG +L+++ L IYVAD+ PYG ++KR+ +FS + +Y
Sbjct: 8 IIIFDSGLGGTSILKEIISLNLSQQLIYVADNQYLPYGLQTKDFIEKRVCEIFSSLNQQY 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ SVIACNTA + LR F + P IK A T++ I IL+T T++ +
Sbjct: 68 RIEASVIACNTATAYAANSLRGKFK-FPIVAMEPGIKPAINLTKNNNIGILATEGTIKSS 126
Query: 136 YTSNLIHSYVSQCH-IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+L+ + S H I ++ + L +E + K + + I E D
Sbjct: 127 RFISLVDRFTSDQHKICIIPGVGLVEEIENQSTSNKKLDAILLPIINQLLQE----EADT 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPLI + ++L P + +D + ++ L I+ S
Sbjct: 183 LVLGCTHYPLIKNKLKKLLPE-IQIVDTTKAV---LNVLTGYIDQIHPSEQKTILFMTSK 238
Query: 255 KPDIAMRRLMQ 265
+ + ++ +
Sbjct: 239 DEETYLSKIKK 249
>gi|197693814|gb|ACH71576.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDS +GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSSVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE G E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGG-----ELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693680|gb|ACH71509.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
+ L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 EIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKQQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QFNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN-----ILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693556|gb|ACH71447.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
VI+L CTH+PLI
Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195
>gi|183220317|ref|YP_001838313.1| glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189910434|ref|YP_001961989.1| glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167775110|gb|ABZ93411.1| Glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778739|gb|ABZ97037.1| Glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 270
Score = 197 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 93/244 (38%), Gaps = 14/244 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ + +IY D V PYG + + F +++K
Sbjct: 9 IGIFDSGLGGLSVLRTLWKETSNIDYIYFGDLVHSPYGQKSKQKVIELSKNAFEYLIEK- 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ ACNTA + D LR S+ G PAIK A A I++ +T TL+
Sbjct: 68 DCEAVLFACNTATSAAADFLRKEH-SIPIFGMEPAIKPALAENPGVKIAVFATDLTLKEE 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NL+ I V LA + + + + +IK T+
Sbjct: 127 KFKNLVTGLAKGSEILPVPCEGLAKLIDSDRWEDAWDFLDSKIK---------LVKSETE 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+IVL CTHY + + P + D + + L + + L +
Sbjct: 178 IIVLGCTHYVFLRERIQYHYP-NIKVYDGNLGTTLHIKNKLHLPDGSKENKNQLDILLNT 236
Query: 254 GKPD 257
D
Sbjct: 237 SDSD 240
>gi|167036404|ref|YP_001671635.1| glutamate racemase [Pseudomonas putida GB-1]
gi|166862892|gb|ABZ01300.1| Glutamate racemase [Pseudomonas putida GB-1]
Length = 296
Score = 197 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 120/258 (46%), Gaps = 2/258 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I++ DSG+GGL + +++ L+PE +YV D+ FPYG+ + +R+ L +
Sbjct: 30 AKRPIVVLDSGVGGLTLSRQLELLLPEASILYVVDNEWFPYGSKSGAEISQRVQHLIDQL 89
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ +P+ V+ACNTA +KD + FL P +++A + I +L+TP T
Sbjct: 90 YTQIRPLAIVVACNTASVAMKDYGLDSCVQHCFL-ITPPLEEAVEISDQKNIVLLATPGT 148
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ Y + ++ +I +++ L + E G K ++ K+
Sbjct: 149 VKSRYIRRAMAITRNRANIWPIAAQPLVALSEARLAGQVASFASFTKLVDDHLTTKQRFS 208
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+P ++ + P +WLD + +A R + + + ++ +F
Sbjct: 209 IDTVILGCTHFPHVIKDLEGIFPSVQNWLDPAKKVALRVASTVKKKHASISQPLKA-VIF 267
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + I R++ G
Sbjct: 268 TSKQDIIGYRKVFSKNGF 285
>gi|197693554|gb|ACH71446.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
VI+L CTH+PLI
Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195
>gi|189501895|ref|YP_001957612.1| hypothetical protein Aasi_0473 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497336|gb|ACE05883.1| hypothetical protein Aasi_0473 [Candidatus Amoebophilus asiaticus
5a2]
Length = 260
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 105/260 (40%), Gaps = 12/260 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N I IFDSG+GGL V + ++ L+P Y+ D PYG ++ + + D+
Sbjct: 1 MHNPIGIFDSGVGGLTVARAIKDLLPNESLYYIGDTANLPYGEKSTEQIQAYVKEI-GDV 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L K + VIAC+TA + L+ + L + P I + + ++ T
Sbjct: 60 LLKQGCKVIVIACSTATAAAAEVLKDYIGDHIPVLNVIDPVIAYVRQHYMGKTLGLIGTQ 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ T + + + ++ +++ +L +E + K ++G E
Sbjct: 120 YTVNTTTYVQKLEASQANINLKCLATPLLVPMIE--------ADQYEKAILQGYLSEPIL 171
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
++L CTHY LI ++ ++ + +A + +L N + +
Sbjct: 172 TDIKGLILGCTHYWLIKEQIIDYYQAKIEIINGAQLLAIHLQKMLLDRNINNSMSNSSKD 231
Query: 250 LFLSGKPDIAMRRLMQG-FG 268
F + K + + + FG
Sbjct: 232 YFTATKHTVGFESVTKRVFG 251
>gi|85711145|ref|ZP_01042205.1| glutamate racemase [Idiomarina baltica OS145]
gi|85695058|gb|EAQ32996.1| glutamate racemase [Idiomarina baltica OS145]
Length = 248
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 47/258 (18%), Positives = 102/258 (39%), Gaps = 18/258 (6%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL V + ++ +Y D PYG+ + + + + + + +
Sbjct: 4 GVFDSGVGGLTVARSLQRSRYFSELLYFGDTARVPYGSKDSNTVTRYALEAV-EFFNGTD 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGA----VPAIKQAAAYTQSGLISILSTPATL 132
++ACNT + + ++ F + G V A++QA + +++T +T+
Sbjct: 63 VDALIVACNTVSVVALETMQ-KFSNKPVYGVLEPGVMALEQATEVNHDSQVLVIATRSTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + H +++ + VEE I +R
Sbjct: 122 QSGEYQRRIKQLGFE-HATAMATPLFVPIVEEELYEGAILHATFDHYFSAL------ERP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV++L CTH+PLI + + + +++ + L ++ + +
Sbjct: 175 DVVLLGCTHFPLISDAISEYF-SGAKTIHSGEAM---VQWLSQHLDLKRQFDETPITIHA 230
Query: 253 SGKPDIAMRRLMQGFGLK 270
S + A+RR+ + + L
Sbjct: 231 SENVE-AVRRVAKRWQLN 247
>gi|197693582|gb|ACH71460.1| glutamate racemase [Helicobacter pylori]
gi|197693602|gb|ACH71470.1| glutamate racemase [Helicobacter pylori]
gi|197693604|gb|ACH71471.1| glutamate racemase [Helicobacter pylori]
gi|197693618|gb|ACH71478.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDETIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNT L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTVSALALEEMQ-KHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILESELLETCMRYYFTPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYF 195
>gi|197693792|gb|ACH71565.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
+ L ++ACNTA L +E++ P + +G ++ AIKQ ++ I +L T AT+
Sbjct: 62 KIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKD-KNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE I E E+ + +
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----SILEGELLETCMRYYFAPLKILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLS 213
VI+L CTH+PLI
Sbjct: 175 KVIILGCTHFPLIARQIEGYF 195
>gi|15639397|ref|NP_218846.1| glutamate racemase (murI) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025639|ref|YP_001933411.1| glutamate racemase [Treponema pallidum subsp. pallidum SS14]
gi|11386905|sp|O83421|MURI_TREPA RecName: Full=Glutamate racemase
gi|229486284|sp|B2S303|MURI_TREPS RecName: Full=Glutamate racemase
gi|3322687|gb|AAC65392.1| glutamate racemase (murI) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189018214|gb|ACD70832.1| glutamate racemase [Treponema pallidum subsp. pallidum SS14]
Length = 268
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 11/258 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
DSGIGGL +R +PE +YVAD V FPYGN + R + + +
Sbjct: 11 AFLDSGIGGLPYAHALRVRVPEASLVYVADRVYFPYGNKSSAQIIARASAVLQKVQTNFS 70
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + V+ACN+ + LR+ VPAIKQA A + I +L+T T+ Y
Sbjct: 71 PHIVVLACNSMSVNALEFLRAQVSVPVVG-VVPAIKQAVACSHKKHIGVLATQCTITHPY 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T+ L + + C + + L +E I ED ++ + + + DV+V
Sbjct: 130 TACLRAQFGAGCVFQMRADARLIECLERGL--IFEVEDMQREAVARSVMPFQEAGVDVLV 187
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
LACTH+ + H+F+ +D+ + + RR L P Q+++ + A +++G
Sbjct: 188 LACTHFVHVRHLFQDCVGTSCTVVDSLEGVVRRTLRLCP----PQSQLRGNAACYVTGAR 243
Query: 257 DIA----MRRLMQGFGLK 270
D R Q FGL+
Sbjct: 244 DAVCAARYARYAQHFGLR 261
>gi|91202612|emb|CAJ72251.1| similar to glutamate racemase [Candidatus Kuenenia stuttgartiensis]
Length = 266
Score = 195 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 61/263 (23%), Positives = 121/263 (46%), Gaps = 11/263 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG+G L +++++R +P ++IY+AD FPYG L + +
Sbjct: 3 IDDPIAIFDSGVGSLSIIKEIRNSLPGENYIYLADKKHFPYGKKTHDELLLIIRNTIEYL 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ P L V+A NT + EL+ ++ +G P + +A + +++G I+IL+T T
Sbjct: 63 SKNFTPKLIVLASNTPSIQVLHELKK--GAVDVIGVFPPVNEAVSVSKTGHIAILATQNT 120
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEK 187
+ + IHS + I ++ + VE ++ + I +E+ +E+
Sbjct: 121 ILSSELDEYIHSQEMPASAKIIKWNASRMVDLVETGDFLSNKEKSLRIISEEL--SLLEE 178
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D I L+ TH P + F L + +D + +A + + LL R N T
Sbjct: 179 TDNMVDTITLSSTHLPFLNEYF-TLLRPCLHLIDPAKIVAGKVKSLLER-NLRTTSQKGT 236
Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270
+ + + ++ +++ G++
Sbjct: 237 LEILATQGKE-SLETIIKRLGIQ 258
>gi|325479835|gb|EGC82920.1| glutamate racemase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 249
Score = 195 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+++ + + Y D + PYG E + + D L+ Y
Sbjct: 4 IGIFDSGLGGLTVLRELIKTN-KASYFYFGDTLRVPYGGREKEEIISFAEDIV-DYLENY 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+IACNT L D L+ + + A G +L T T+
Sbjct: 62 NIDYYIIACNTISVLATDILKEKYNKDFIPITDMGLRASLACD----GDFLVLGTKTTVN 117
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ N I ++ V++ L +E + E+ +K ++ K+
Sbjct: 118 SHFYKNNIEKL-KDAKVYEVAATKLVDLIESG----TLDEENLKFYLDDYLQIANEKKIP 172
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
I+LACTHYP+I + + + +D + ++ +
Sbjct: 173 NIILACTHYPIIRDSIEKRLTYKANIIDPASYASKFLKS 211
>gi|260221040|emb|CBA29208.1| hypothetical protein Csp_A10990 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 147
Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 72/141 (51%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K I +FDSG+GGL VL+ +R +P F+YVAD PYG +D L +R +
Sbjct: 1 MSKLSNCPIGVFDSGVGGLSVLRALRAELPHEKFVYVADSGHAPYGERDDDYLIERSHTI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
D++Q V+ACNTA LR P + +G PA+K A +++ +I +++
Sbjct: 61 VRWFRDRHQIKALVVACNTATAAAIHVLREAHPELPIIGIEPALKPAVVQSKTKVIGVMA 120
Query: 128 TPATLRRTYTSNLIHSYVSQC 148
T +TL L+ S +Q
Sbjct: 121 TRSTLNSEKFKRLLTSLENQA 141
>gi|153847805|ref|ZP_01993956.1| glutamate racemase [Vibrio parahaemolyticus AQ3810]
gi|149744710|gb|EDM56178.1| glutamate racemase [Vibrio parahaemolyticus AQ3810]
Length = 214
Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++
Sbjct: 40 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 99
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA T++ LR S+ +G VPAIK A+ G + +++TPAT+
Sbjct: 100 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLLATQG-VGLIATPATV 157
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
R YT LI + + L+ S L EE G + DE+K +
Sbjct: 158 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKSILSPL 208
>gi|293596521|ref|ZP_06684239.1| glutamate racemase [Listeria monocytogenes J2818]
gi|293589867|gb|EFF98201.1| glutamate racemase [Listeria monocytogenes J2818]
Length = 176
Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
+D+ + VIACNTA ++R + +G + P + A T++ I +L T
Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSS 155
T+ + + + ++
Sbjct: 119 TVESMAYPTALKGLNRRVEVDSLAC 143
>gi|157363388|ref|YP_001470155.1| glutamate racemase [Thermotoga lettingae TMO]
gi|157313992|gb|ABV33091.1| glutamate racemase [Thermotoga lettingae TMO]
Length = 278
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 19/251 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG VLQK+ MP ++YVAD + PYG + +R+ + + L
Sbjct: 3 IGVFDSGIGGFTVLQKLVEYMPHNEYVYVADTLYAPYGTKTHQQIFERVTRIIN-FLALQ 61
Query: 76 QPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V ACNTA ++ L + P + G + ++ + I + +T T++
Sbjct: 62 GADCIVAACNTADAVLKLSSLSARIP--PYFGILD---FDINFSSAQCIGVAATELTIKS 116
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + I L +E + + EIK+ CF K D+
Sbjct: 117 GIYEKLLLNR-GISKIIQRPCQKLVELIENNEVHGRQADIEIKE----CFEPF--KNADL 169
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTH PL++ + + P + + D ++S+ + L R + ++ + F++
Sbjct: 170 VILGCTHLPLLIEKIQTIFP-KLRFYDPAESLVKNI-WLSCRQD---GKIIGKISFFVTQ 224
Query: 255 KPDIAMRRLMQ 265
P ++ +
Sbjct: 225 DPLSFHTKISK 235
>gi|326795261|ref|YP_004313081.1| glutamate racemase [Marinomonas mediterranea MMB-1]
gi|326546025|gb|ADZ91245.1| Glutamate racemase [Marinomonas mediterranea MMB-1]
Length = 276
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 73/226 (32%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ ++ I DSG GGL VL +R PE + Y AD PYG LK RL+ + +
Sbjct: 1 MKYNVAIIDSGSGGLSVLNTIRRQSPELNLHYYADSCFSPYGEKSSEFLKSRLVQIGRYL 60
Query: 72 LD-KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
V+ACNTA D LR S+ +G PA+K A +S+L+TP
Sbjct: 61 EALSEPVHAIVLACNTATVEGIDALRRAV-SIPVVGVEPAVKPALVNPNVSRVSVLATPV 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ LI + + + L+SS LA ++ E + KEIE E
Sbjct: 120 TIGSNRLQALISLWKNDKQVQLISSADLARLIDSADSR---SESALCKEIERICSEVTVF 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
R DV+VLACTHYPL+ F V+ L+ S S++ + L +
Sbjct: 177 RPDVLVLACTHYPLVRDRFEGSL-HGVEILEPSSSVSNQLIRRLEQ 221
>gi|257066004|ref|YP_003152260.1| glutamate racemase [Anaerococcus prevotii DSM 20548]
gi|256797884|gb|ACV28539.1| glutamate racemase [Anaerococcus prevotii DSM 20548]
Length = 250
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ + + Y D + PYG + L++ + D L+K+
Sbjct: 4 IGVFDSGLGGLTVLRELAKTN-KSQYFYFGDSLRVPYGGRSEEELRRFSADIV-DFLEKF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GLISILSTPATLR 133
VIACNT + D LR + +P + A ++ G +L T T+
Sbjct: 62 DIDYYVIACNTLSVTVTDFLREKYDKKF----IPITELALKASEKYQGKFLVLGTKTTIN 117
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ N + + ++ V++ L +E K + ++ + I+ K+ +
Sbjct: 118 SHFYKNNLEK-NPRNTVYEVAASKLVDLIEA----DKKDDKKLNEYIDSYIKIANDKKIE 172
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
I+LACTHYP+I + + + +D +
Sbjct: 173 NILLACTHYPIIRENIERRLDYKANIIDPA 202
>gi|167741431|ref|ZP_02414205.1| glutamate racemase [Burkholderia pseudomallei 14]
Length = 171
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 1 MKIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + ++ + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAIGEWLVAQGAKAL-VVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ + +L+T ATLR L+ + + C L +E G
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSP 170
>gi|32490882|ref|NP_871136.1| hypothetical protein WGLp133 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|81741819|sp|Q8D368|MURI_WIGBR RecName: Full=Glutamate racemase
gi|25166088|dbj|BAC24279.1| murI [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 268
Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 64/257 (24%), Positives = 123/257 (47%), Gaps = 6/257 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
ILIFDSGIGGL ++R +P ++IYV D+ GFPYGN + + R+ + + + Y
Sbjct: 7 ILIFDSGIGGLYFYSEIRKYIPHANYIYVLDNEGFPYGNKYKNFIFDRVTNIIIYMHNLY 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L+++ACNTA ++ L+ F S +G P I ++ T++ +I +L+T T+
Sbjct: 67 KFDLTIVACNTASSIALSYLKKFFIS-PVIGIKPDINESVNITKNNIIGLLATKITINYV 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
++ +++ + + + L EE G I ++IK ++ + K D I
Sbjct: 126 LSNFFNFKSLNKIKLITLDANELIKLSEEKMRGKIIHLNKIKNILKPILLNKNI--PDTI 183
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTH + F+++ P ++D+ + + +L N + ++ +
Sbjct: 184 ILGCTHLLFFYYEFKKIFPIGTKFIDSKKILLNK-SIMLISENYIKKNKIKHQTVYYTKN 242
Query: 256 PDIAMR--RLMQGFGLK 270
+ L+ +G K
Sbjct: 243 NRYFKKICPLLNKYGFK 259
>gi|194477143|ref|YP_002049322.1| Glutamate racemase [Paulinella chromatophora]
gi|171192150|gb|ACB43112.1| Glutamate racemase [Paulinella chromatophora]
Length = 272
Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 15/253 (5%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL ++ P + +IY+ D PYG ++ S L Q
Sbjct: 7 GLFDSGVGGLTVLHQVLKRHPNHSYIYLGDTARVPYGERNPREIRSIAGEAIS-WLRNQQ 65
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
++ACNT L D + + G + AA ++ + +LST AT
Sbjct: 66 VDALIMACNTTNALAYD-IALKISGVPVYGLID---SAARCIRAKRVGVLSTAATAASRA 121
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ IH Y SQ + + +E ++ ++ ++I+
Sbjct: 122 YTLQIHRYSSQTQVIEQACPAFVPLIEIG----NFQDPRLRIAANLYLAPLLAANVEIIM 177
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP------RINTHQTRVFDDHAL 250
L CTHYPL+ + RQL P + LD + ++++R LL + + ++
Sbjct: 178 LGCTHYPLLEPLLRQLLPSHIQLLDPARALSKRLDQLLGIPKRTVHNSINSSKDLAVCRF 237
Query: 251 FLSGKPDIAMRRL 263
++ + +
Sbjct: 238 CVTAASETFAKAA 250
>gi|313892611|ref|ZP_07826198.1| putative glutamate racemase [Dialister microaerophilus UPII 345-E]
gi|313119008|gb|EFR42213.1| putative glutamate racemase [Dialister microaerophilus UPII 345-E]
Length = 257
Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 68/270 (25%), Positives = 111/270 (41%), Gaps = 29/270 (10%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL V + +R PE I++ D PYG H +
Sbjct: 1 MDNRP--------IGIMDSGVGGLTVARVLRQKYPEESIIFIGDTANNPYGERTSHEI-N 51
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAF-TLIKDELRSTFPSMAFLGA---VPAIKQAAAYT 118
L L + +IACNT + K+ + G +P + A
Sbjct: 52 VLAGKMKKFLISKNVKMIIIACNTITFNVQKNFYDEK---IPIEGMSLDLPHFENA---- 104
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
G I++ +TPAT+ N I I + LA +EE KI E +KK
Sbjct: 105 --GSITVFATPATINLHIHKNKIKEKFPNSKIEEMPCEGLAHAIEENNSREKITE-ILKK 161
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
IE +++ TD+ + ACTHYPL+ VF+++ + D ++S +
Sbjct: 162 IIE----KRKISPTDIGIFACTHYPLVEDVFKKIW-NKTKFWDPAESTVEN-SMKKLKKE 215
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
++ + + + + + A + + FG
Sbjct: 216 NKKSESYTEDLFYFTENAERAEILVKKFFG 245
>gi|195937619|ref|ZP_03083001.1| glutamate racemase [Escherichia coli O157:H7 str. EC4024]
Length = 143
Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 55/143 (38%), Positives = 91/143 (63%), Gaps = 1/143 (0%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILA 159
T LI + ++C I ++ S +
Sbjct: 121 THELIARFANECQIEMLGSAEMV 143
>gi|138999530|dbj|BAF51348.1| glutamate recemase [Streptococcus mutans]
gi|138999536|dbj|BAF51349.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 188 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKK-VKMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118
Query: 140 LIHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 119 KIRDLSPQMKVRSLACPKFVPIV 141
>gi|329121243|ref|ZP_08249870.1| glutamate racemase [Dialister micraerophilus DSM 19965]
gi|327470177|gb|EGF15640.1| glutamate racemase [Dialister micraerophilus DSM 19965]
Length = 257
Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 29/270 (10%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL V + +R PE I++ D PYG H +
Sbjct: 1 MDNRP--------IGIMDSGVGGLTVARVLRQKYPEESIIFIGDTANNPYGERTSHEI-N 51
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAF-TLIKDELRSTFPSMAFLGA---VPAIKQAAAYT 118
L L + +IACNT + K+ + G +P + A
Sbjct: 52 VLAGKMKKFLISKNVKMIIIACNTITFNVQKNFYDEK---IPIEGMSLDLPHFENA---- 104
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
G I++ +TPAT+ N I I + LA +EE KI E +KK
Sbjct: 105 --GSITVFATPATINLHIHKNKIKEKFPNSKIEEMPCEGLAHAIEENNSREKITE-ILKK 161
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
IE +++ TD+ + ACTHYPL+ VF+++ ++ D ++S +
Sbjct: 162 IIE----KRKISPTDIGIFACTHYPLVEDVFKKIW-NKTEFWDPAESTVEN-SMKKLKKE 215
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
++ + + + + + A + + FG
Sbjct: 216 NKKSESYTEDLFYFTENAERAEILVKKFFG 245
>gi|167043360|gb|ABZ08063.1| putative Asp/Glu/hydantoin racemase [uncultured marine
crenarchaeote HF4000_ANIW141O9]
Length = 253
Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 20/259 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG G L +++ ++ + + +Y AD FPYG L K + + + +K+
Sbjct: 4 IAVFDSGFGSLSIIKPIQQAI-KSDIVYFADQKNFPYGKKSKSELTKIITKTVNMLEEKF 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L VI NT L+ + +P IK+AA + +G ++IL+T A +R
Sbjct: 63 EPDLIVIGSNTPSLLV------EINKKNIVKVLPPIKKAAKISMTGNVAILATLALIRSK 116
Query: 136 YTSNLIHSYVSQCHIHL--VSSMILASRVEEY--ACGIKIKEDEIKKEIEGCFIEKEGKR 191
S + H++L + + L VEE K+ E ++K + F++
Sbjct: 117 KLSEYVRKSRLPKHVNLKRIDATQLVRLVEEGKFLDNRKLCEKTVRKVLSKPFLK---SN 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV +L+ TH P ++ ++ P + ++D ++ IA++ R ++ + + + +F
Sbjct: 174 VDVAILSSTHLPFLLPFLKKQFP-NITFVDPANEIAQKVRKIVAK----KPSKTNTMKIF 228
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S P R L Q G+K
Sbjct: 229 TSSDPKKFQRYLWQ-IGIK 246
>gi|332653705|ref|ZP_08419449.1| glutamate racemase [Ruminococcaceae bacterium D16]
gi|332516791|gb|EGJ46396.1| glutamate racemase [Ruminococcaceae bacterium D16]
Length = 278
Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 10/246 (4%)
Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85
V +++R +P + +Y D PYGN + ++ + + L V ACN
Sbjct: 18 FSVARRVRRQLPNENILYFGDGGNNPYGNHTAEEILSLTRYMLDFMRQRQVKALLV-ACN 76
Query: 86 TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145
T LI + R L V A ++AA+ + ++ST T LI
Sbjct: 77 TISCLIDEYRREM--DCPVLSVVQAGAESAAHRPEKRVGVISTCFTASTGCYPALIAQLA 134
Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
+ + LA+ VE A +I E E+++ ++G + + + +LACTHYPL+
Sbjct: 135 PEKKVFSRGYKNLAAMVEHGASQQEIDE-ELRENLDGLVHQ---DQVECCLLACTHYPLV 190
Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLSGKPDIAMRRLM 264
R+L P + +D +D +AR L R ++ + P + R
Sbjct: 191 EENIRRLYP-QLQLVDPADRMARELERCLKETRQISRRSEPGTLEIYTTADPQEYI-RAA 248
Query: 265 QGFGLK 270
+ GL+
Sbjct: 249 RRAGLE 254
>gi|138998500|dbj|BAF51362.1| glutamate recemase [Streptococcus mutans]
gi|138998505|dbj|BAF51363.1| glutamate recemase [Streptococcus mutans]
gi|138998507|dbj|BAF51364.1| glutamate recemase [Streptococcus mutans]
gi|138998509|dbj|BAF51365.1| glutamate recemase [Streptococcus mutans]
gi|138998515|dbj|BAF51366.1| glutamate recemase [Streptococcus mutans]
gi|138998517|dbj|BAF51367.1| glutamate recemase [Streptococcus mutans]
gi|138998519|dbj|BAF51368.1| glutamate recemase [Streptococcus mutans]
gi|138998522|dbj|BAF51369.1| glutamate recemase [Streptococcus mutans]
gi|138998524|dbj|BAF51370.1| glutamate recemase [Streptococcus mutans]
gi|138998529|dbj|BAF51371.1| glutamate recemase [Streptococcus mutans]
gi|138998531|dbj|BAF51372.1| glutamate recemase [Streptococcus mutans]
gi|138998533|dbj|BAF51373.1| glutamate recemase [Streptococcus mutans]
gi|138998536|dbj|BAF51374.1| glutamate recemase [Streptococcus mutans]
gi|138998538|dbj|BAF51375.1| glutamate recemase [Streptococcus mutans]
gi|138998545|dbj|BAF51376.1| glutamate recemase [Streptococcus mutans]
gi|138998547|dbj|BAF51377.1| glutamate recemase [Streptococcus mutans]
gi|138998549|dbj|BAF51378.1| glutamate recemase [Streptococcus mutans]
gi|138998551|dbj|BAF51379.1| glutamate recemase [Streptococcus mutans]
gi|138998557|dbj|BAF51380.1| glutamate recemase [Streptococcus mutans]
gi|138998559|dbj|BAF51381.1| glutamate recemase [Streptococcus mutans]
gi|138998565|dbj|BAF51382.1| glutamate recemase [Streptococcus mutans]
gi|138998567|dbj|BAF51383.1| glutamate recemase [Streptococcus mutans]
gi|138998573|dbj|BAF51384.1| glutamate recemase [Streptococcus mutans]
gi|138998575|dbj|BAF51385.1| glutamate recemase [Streptococcus mutans]
gi|138998579|dbj|BAF51386.1| glutamate recemase [Streptococcus mutans]
gi|138998581|dbj|BAF51387.1| glutamate recemase [Streptococcus mutans]
gi|138998586|dbj|BAF51388.1| glutamate recemase [Streptococcus mutans]
gi|138998588|dbj|BAF51389.1| glutamate recemase [Streptococcus mutans]
gi|138998590|dbj|BAF51390.1| glutamate recemase [Streptococcus mutans]
gi|138998596|dbj|BAF51391.1| glutamate recemase [Streptococcus mutans]
gi|138998599|dbj|BAF51392.1| glutamate recemase [Streptococcus mutans]
gi|138998601|dbj|BAF51393.1| glutamate recemase [Streptococcus mutans]
gi|138998608|dbj|BAF51394.1| glutamate recemase [Streptococcus mutans]
gi|138998610|dbj|BAF51395.1| glutamate recemase [Streptococcus mutans]
gi|138998612|dbj|BAF51396.1| glutamate recemase [Streptococcus mutans]
gi|138998618|dbj|BAF51397.1| glutamate recemase [Streptococcus mutans]
gi|138998620|dbj|BAF51398.1| glutamate recemase [Streptococcus mutans]
gi|138998627|dbj|BAF51399.1| glutamate recemase [Streptococcus mutans]
gi|138998629|dbj|BAF51400.1| glutamate recemase [Streptococcus mutans]
gi|138998631|dbj|BAF51401.1| glutamate recemase [Streptococcus mutans]
gi|138998636|dbj|BAF51402.1| glutamate recemase [Streptococcus mutans]
gi|138998638|dbj|BAF51403.1| glutamate recemase [Streptococcus mutans]
gi|138998640|dbj|BAF51404.1| glutamate recemase [Streptococcus mutans]
gi|138998647|dbj|BAF51405.1| glutamate recemase [Streptococcus mutans]
gi|138998649|dbj|BAF51406.1| glutamate recemase [Streptococcus mutans]
gi|138998654|dbj|BAF51407.1| glutamate recemase [Streptococcus mutans]
gi|138998656|dbj|BAF51408.1| glutamate recemase [Streptococcus mutans]
gi|138998662|dbj|BAF51409.1| glutamate recemase [Streptococcus mutans]
gi|138998664|dbj|BAF51410.1| glutamate recemase [Streptococcus mutans]
gi|138998667|dbj|BAF51411.1| glutamate recemase [Streptococcus mutans]
gi|138998672|dbj|BAF51412.1| glutamate recemase [Streptococcus mutans]
gi|138998678|dbj|BAF51413.1| glutamate recemase [Streptococcus mutans]
gi|138998680|dbj|BAF51414.1| glutamate recemase [Streptococcus mutans]
gi|138998685|dbj|BAF51415.1| glutamate recemase [Streptococcus mutans]
gi|138998690|dbj|BAF51416.1| glutamate recemase [Streptococcus mutans]
gi|138998697|dbj|BAF51417.1| glutamate recemase [Streptococcus mutans NN2025]
gi|138998699|dbj|BAF51418.1| glutamate recemase [Streptococcus mutans]
gi|138998701|dbj|BAF51419.1| glutamate recemase [Streptococcus mutans]
gi|138998704|dbj|BAF51420.1| glutamate recemase [Streptococcus mutans]
gi|138998706|dbj|BAF51421.1| glutamate recemase [Streptococcus mutans]
gi|138998712|dbj|BAF51422.1| glutamate recemase [Streptococcus mutans]
gi|138998714|dbj|BAF51423.1| glutamate recemase [Streptococcus mutans]
gi|138998718|dbj|BAF51424.1| glutamate recemase [Streptococcus mutans]
gi|138998720|dbj|BAF51425.1| glutamate recemase [Streptococcus mutans]
gi|138998726|dbj|BAF51426.1| glutamate recemase [Streptococcus mutans]
gi|138998734|dbj|BAF51427.1| glutamate recemase [Streptococcus mutans]
gi|138998769|dbj|BAF51437.1| glutamate recemase [Streptococcus mutans]
gi|138998771|dbj|BAF51438.1| glutamate recemase [Streptococcus mutans]
gi|138998776|dbj|BAF51439.1| glutamate recemase [Streptococcus mutans]
gi|138998779|dbj|BAF51440.1| glutamate recemase [Streptococcus mutans]
gi|138998781|dbj|BAF51441.1| glutamate recemase [Streptococcus mutans]
gi|138998787|dbj|BAF51442.1| glutamate recemase [Streptococcus mutans]
gi|138998792|dbj|BAF51443.1| glutamate recemase [Streptococcus mutans]
gi|138998794|dbj|BAF51444.1| glutamate recemase [Streptococcus mutans]
gi|138998797|dbj|BAF51445.1| glutamate recemase [Streptococcus mutans]
gi|138998799|dbj|BAF51446.1| glutamate recemase [Streptococcus mutans]
gi|138998803|dbj|BAF51447.1| glutamate recemase [Streptococcus mutans]
gi|138998805|dbj|BAF51448.1| glutamate recemase [Streptococcus mutans]
gi|138999538|dbj|BAF51350.1| glutamate recemase [Streptococcus mutans]
gi|138999544|dbj|BAF51351.1| glutamate recemase [Streptococcus mutans]
gi|138999546|dbj|BAF51352.1| glutamate recemase [Streptococcus mutans]
gi|138999550|dbj|BAF51353.1| glutamate recemase [Streptococcus mutans]
gi|138999552|dbj|BAF51354.1| glutamate recemase [Streptococcus mutans]
gi|138999554|dbj|BAF51355.1| glutamate recemase [Streptococcus mutans]
gi|138999559|dbj|BAF51356.1| glutamate recemase [Streptococcus mutans]
gi|138999565|dbj|BAF51357.1| glutamate recemase [Streptococcus mutans]
gi|138999567|dbj|BAF51358.1| glutamate recemase [Streptococcus mutans]
gi|138999574|dbj|BAF51359.1| glutamate recemase [Streptococcus mutans]
gi|138999576|dbj|BAF51360.1| glutamate recemase [Streptococcus mutans]
gi|138999578|dbj|BAF51361.1| glutamate recemase [Streptococcus mutans]
gi|195536350|dbj|BAG67898.1| glutamate recemase [Streptococcus mutans]
gi|195536352|dbj|BAG67899.1| glutamate recemase [Streptococcus mutans]
gi|195536354|dbj|BAG67900.1| glutamate recemase [Streptococcus mutans]
gi|195536356|dbj|BAG67901.1| glutamate recemase [Streptococcus mutans]
gi|195536358|dbj|BAG67902.1| glutamate recemase [Streptococcus mutans]
gi|195536360|dbj|BAG67903.1| glutamate recemase [Streptococcus mutans]
gi|195536362|dbj|BAG67904.1| glutamate recemase [Streptococcus mutans]
gi|195536364|dbj|BAG67905.1| glutamate recemase [Streptococcus mutans]
gi|195536366|dbj|BAG67906.1| glutamate recemase [Streptococcus mutans]
gi|195536368|dbj|BAG67907.1| glutamate recemase [Streptococcus mutans]
gi|195536370|dbj|BAG67908.1| glutamate recemase [Streptococcus mutans]
gi|195536372|dbj|BAG67909.1| glutamate recemase [Streptococcus mutans]
gi|195536374|dbj|BAG67910.1| glutamate recemase [Streptococcus mutans]
gi|195536376|dbj|BAG67911.1| glutamate recemase [Streptococcus mutans]
gi|195536378|dbj|BAG67912.1| glutamate recemase [Streptococcus mutans]
gi|195536380|dbj|BAG67913.1| glutamate recemase [Streptococcus mutans]
gi|195536382|dbj|BAG67914.1| glutamate recemase [Streptococcus mutans]
gi|195536384|dbj|BAG67915.1| glutamate recemase [Streptococcus mutans]
gi|195536386|dbj|BAG67916.1| glutamate recemase [Streptococcus mutans]
gi|195536388|dbj|BAG67917.1| glutamate recemase [Streptococcus mutans]
gi|195536390|dbj|BAG67918.1| glutamate recemase [Streptococcus mutans]
gi|195536392|dbj|BAG67919.1| glutamate recemase [Streptococcus mutans]
gi|195536394|dbj|BAG67920.1| glutamate recemase [Streptococcus mutans]
gi|195536396|dbj|BAG67921.1| glutamate recemase [Streptococcus mutans]
gi|195536398|dbj|BAG67922.1| glutamate recemase [Streptococcus mutans]
gi|195536400|dbj|BAG67923.1| glutamate recemase [Streptococcus mutans]
gi|195536402|dbj|BAG67924.1| glutamate recemase [Streptococcus mutans]
gi|195536404|dbj|BAG67925.1| glutamate recemase [Streptococcus mutans]
gi|195536406|dbj|BAG67926.1| glutamate recemase [Streptococcus mutans]
gi|195536408|dbj|BAG67927.1| glutamate recemase [Streptococcus mutans]
gi|195536410|dbj|BAG67928.1| glutamate recemase [Streptococcus mutans]
gi|195536412|dbj|BAG67929.1| glutamate recemase [Streptococcus mutans]
gi|195536414|dbj|BAG67930.1| glutamate recemase [Streptococcus mutans]
gi|195536416|dbj|BAG67931.1| glutamate recemase [Streptococcus mutans]
gi|195536418|dbj|BAG67932.1| glutamate recemase [Streptococcus mutans]
gi|195536420|dbj|BAG67933.1| glutamate recemase [Streptococcus mutans]
gi|195536422|dbj|BAG67934.1| glutamate recemase [Streptococcus mutans]
gi|195536424|dbj|BAG67935.1| glutamate recemase [Streptococcus mutans]
gi|195536426|dbj|BAG67936.1| glutamate recemase [Streptococcus mutans]
gi|195536428|dbj|BAG67937.1| glutamate recemase [Streptococcus mutans]
gi|195536430|dbj|BAG67938.1| glutamate recemase [Streptococcus mutans]
gi|195536432|dbj|BAG67939.1| glutamate recemase [Streptococcus mutans]
gi|195536434|dbj|BAG67940.1| glutamate recemase [Streptococcus mutans]
gi|195536436|dbj|BAG67941.1| glutamate recemase [Streptococcus mutans]
gi|195536438|dbj|BAG67942.1| glutamate recemase [Streptococcus mutans]
gi|195536440|dbj|BAG67943.1| glutamate recemase [Streptococcus mutans]
gi|195536442|dbj|BAG67944.1| glutamate recemase [Streptococcus mutans]
gi|195536444|dbj|BAG67945.1| glutamate recemase [Streptococcus mutans]
gi|195536446|dbj|BAG67946.1| glutamate recemase [Streptococcus mutans]
gi|195536448|dbj|BAG67947.1| glutamate recemase [Streptococcus mutans]
gi|195536450|dbj|BAG67948.1| glutamate recemase [Streptococcus mutans]
gi|195536452|dbj|BAG67949.1| glutamate recemase [Streptococcus mutans]
gi|195536454|dbj|BAG67950.1| glutamate recemase [Streptococcus mutans]
gi|195536456|dbj|BAG67951.1| glutamate recemase [Streptococcus mutans]
gi|195536458|dbj|BAG67952.1| glutamate recemase [Streptococcus mutans]
gi|195536460|dbj|BAG67953.1| glutamate recemase [Streptococcus mutans]
gi|195536462|dbj|BAG67954.1| glutamate recemase [Streptococcus mutans]
gi|195536464|dbj|BAG67955.1| glutamate recemase [Streptococcus mutans]
gi|195536466|dbj|BAG67956.1| glutamate recemase [Streptococcus mutans]
gi|195536468|dbj|BAG67957.1| glutamate recemase [Streptococcus mutans]
gi|195536470|dbj|BAG67958.1| glutamate recemase [Streptococcus mutans]
gi|195536472|dbj|BAG67959.1| glutamate recemase [Streptococcus mutans]
gi|195536474|dbj|BAG67960.1| glutamate recemase [Streptococcus mutans]
gi|195536476|dbj|BAG67961.1| glutamate recemase [Streptococcus mutans]
gi|195536478|dbj|BAG67962.1| glutamate recemase [Streptococcus mutans]
gi|195536480|dbj|BAG67963.1| glutamate recemase [Streptococcus mutans]
gi|195536482|dbj|BAG67964.1| glutamate recemase [Streptococcus mutans]
gi|195536484|dbj|BAG67965.1| glutamate recemase [Streptococcus mutans]
gi|195536486|dbj|BAG67966.1| glutamate recemase [Streptococcus mutans]
gi|195536488|dbj|BAG67967.1| glutamate recemase [Streptococcus mutans]
gi|195536490|dbj|BAG67968.1| glutamate recemase [Streptococcus mutans]
gi|195536492|dbj|BAG67969.1| glutamate recemase [Streptococcus mutans]
gi|195536494|dbj|BAG67970.1| glutamate recemase [Streptococcus mutans]
gi|195536496|dbj|BAG67971.1| glutamate recemase [Streptococcus mutans]
gi|195536498|dbj|BAG67972.1| glutamate recemase [Streptococcus mutans]
gi|195536500|dbj|BAG67973.1| glutamate recemase [Streptococcus mutans]
gi|195536502|dbj|BAG67974.1| glutamate recemase [Streptococcus mutans]
gi|195536504|dbj|BAG67975.1| glutamate recemase [Streptococcus mutans]
gi|195536506|dbj|BAG67976.1| glutamate recemase [Streptococcus mutans]
gi|195536508|dbj|BAG67977.1| glutamate recemase [Streptococcus mutans]
gi|195536510|dbj|BAG67978.1| glutamate recemase [Streptococcus mutans]
gi|195536512|dbj|BAG67979.1| glutamate recemase [Streptococcus mutans]
gi|195536514|dbj|BAG67980.1| glutamate recemase [Streptococcus mutans]
gi|195536516|dbj|BAG67981.1| glutamate recemase [Streptococcus mutans]
gi|195536518|dbj|BAG67982.1| glutamate recemase [Streptococcus mutans]
gi|195536520|dbj|BAG67983.1| glutamate recemase [Streptococcus mutans]
gi|195536522|dbj|BAG67984.1| glutamate recemase [Streptococcus mutans]
gi|195536524|dbj|BAG67985.1| glutamate recemase [Streptococcus mutans]
gi|195536526|dbj|BAG67986.1| glutamate recemase [Streptococcus mutans]
gi|195536528|dbj|BAG67987.1| glutamate recemase [Streptococcus mutans]
gi|195536530|dbj|BAG67988.1| glutamate recemase [Streptococcus mutans]
gi|195536532|dbj|BAG67989.1| glutamate recemase [Streptococcus mutans]
gi|195536534|dbj|BAG67990.1| glutamate recemase [Streptococcus mutans]
gi|195536536|dbj|BAG67991.1| glutamate recemase [Streptococcus mutans]
gi|195536538|dbj|BAG67992.1| glutamate recemase [Streptococcus mutans]
gi|195536540|dbj|BAG67993.1| glutamate recemase [Streptococcus mutans]
gi|195536542|dbj|BAG67994.1| glutamate recemase [Streptococcus mutans]
gi|195536544|dbj|BAG67995.1| glutamate recemase [Streptococcus mutans]
gi|195536546|dbj|BAG67996.1| glutamate recemase [Streptococcus mutans]
gi|195536548|dbj|BAG67997.1| glutamate recemase [Streptococcus mutans]
gi|195536550|dbj|BAG67998.1| glutamate recemase [Streptococcus mutans]
gi|195536552|dbj|BAG67999.1| glutamate recemase [Streptococcus mutans]
gi|195536554|dbj|BAG68000.1| glutamate recemase [Streptococcus mutans]
gi|195536556|dbj|BAG68001.1| glutamate recemase [Streptococcus mutans]
gi|195536558|dbj|BAG68002.1| glutamate recemase [Streptococcus mutans]
gi|195536560|dbj|BAG68003.1| glutamate recemase [Streptococcus mutans]
gi|195536562|dbj|BAG68004.1| glutamate recemase [Streptococcus mutans]
gi|195536564|dbj|BAG68005.1| glutamate recemase [Streptococcus mutans]
gi|195536566|dbj|BAG68006.1| glutamate recemase [Streptococcus mutans]
gi|195536568|dbj|BAG68007.1| glutamate recemase [Streptococcus mutans]
gi|195536570|dbj|BAG68008.1| glutamate recemase [Streptococcus mutans]
gi|195536572|dbj|BAG68009.1| glutamate recemase [Streptococcus mutans]
gi|195536574|dbj|BAG68010.1| glutamate recemase [Streptococcus mutans]
gi|195536576|dbj|BAG68011.1| glutamate recemase [Streptococcus mutans]
gi|195536578|dbj|BAG68012.1| glutamate recemase [Streptococcus mutans]
gi|195536580|dbj|BAG68013.1| glutamate recemase [Streptococcus mutans]
gi|195536582|dbj|BAG68014.1| glutamate recemase [Streptococcus mutans]
gi|195536584|dbj|BAG68015.1| glutamate recemase [Streptococcus mutans]
gi|195536586|dbj|BAG68016.1| glutamate recemase [Streptococcus mutans]
gi|195536588|dbj|BAG68017.1| glutamate recemase [Streptococcus mutans]
gi|195536590|dbj|BAG68018.1| glutamate recemase [Streptococcus mutans]
gi|195536592|dbj|BAG68019.1| glutamate recemase [Streptococcus mutans]
gi|195536594|dbj|BAG68020.1| glutamate recemase [Streptococcus mutans]
gi|195536608|dbj|BAG68027.1| glutamate recemase [Streptococcus mutans]
gi|195536610|dbj|BAG68028.1| glutamate recemase [Streptococcus mutans]
gi|195536612|dbj|BAG68029.1| glutamate recemase [Streptococcus mutans]
gi|195536614|dbj|BAG68030.1| glutamate recemase [Streptococcus mutans]
gi|195536616|dbj|BAG68031.1| glutamate recemase [Streptococcus mutans]
gi|195536618|dbj|BAG68032.1| glutamate recemase [Streptococcus mutans]
gi|195536620|dbj|BAG68033.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKK-VKMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118
Query: 140 LIHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 119 KILDLSPQMKVRSLACPKFVPIV 141
>gi|195536596|dbj|BAG68021.1| glutamate recemase [Streptococcus mutans]
gi|195536598|dbj|BAG68022.1| glutamate recemase [Streptococcus mutans]
gi|195536600|dbj|BAG68023.1| glutamate recemase [Streptococcus mutans]
gi|195536602|dbj|BAG68024.1| glutamate recemase [Streptococcus mutans]
gi|195536604|dbj|BAG68025.1| glutamate recemase [Streptococcus mutans]
gi|195536606|dbj|BAG68026.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKK-VKMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAIVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118
Query: 140 LIHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 119 KILDLSPQMKVRSLACPKFVPIV 141
>gi|138998741|dbj|BAF51429.1| glutamate recemase [Streptococcus mutans]
gi|138998743|dbj|BAF51430.1| glutamate recemase [Streptococcus mutans]
gi|138998746|dbj|BAF51431.1| glutamate recemase [Streptococcus mutans]
gi|138998748|dbj|BAF51432.1| glutamate recemase [Streptococcus mutans]
gi|138998750|dbj|BAF51433.1| glutamate recemase [Streptococcus mutans]
gi|138998761|dbj|BAF51434.1| glutamate recemase [Streptococcus mutans]
gi|138998763|dbj|BAF51435.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKR-VKMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118
Query: 140 LIHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 119 KILDLSPQMKVRSLACPKFVPIV 141
>gi|207742838|ref|YP_002259230.1| glutamate racemase (n terminal fragment) protein [Ralstonia
solanacearum IPO1609]
gi|206594232|emb|CAQ61159.1| probable glutamate racemase (n terminal fragment) protein
[Ralstonia solanacearum IPO1609]
Length = 141
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 1 MTARAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRV 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++ + L VIACNTA LR ++ +G P +K A A +QS ++ +L+
Sbjct: 61 CEWLVGQGCKAL-VIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHI 150
T +TLR + L+ + C +
Sbjct: 119 TESTLRSDKFARLLGNVSGDCQV 141
>gi|138998767|dbj|BAF51436.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKKA-KMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118
Query: 140 LIHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 119 KILDLSPQMKVRSLACPKFVPIV 141
>gi|323342863|ref|ZP_08083095.1| glutamate racemase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463975|gb|EFY09169.1| glutamate racemase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 252
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 18/251 (7%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
IFDSG+GG V Q ++ + + AD PYGN D A+ + D +
Sbjct: 11 GIFDSGLGGYSVYQYLKQHLDPVSLVLYADQKNAPYGNQSDDAIIAYTLHAMKWFQD-HD 69
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
VIACNT + R+ FP M +G + + I+ST AT
Sbjct: 70 IRDVVIACNTVSAVALSTARNHFPDMNLIGIIELTVGQIEPNADTCVGIVSTLATFNAHA 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
N IH H+ ++ L + +E +K+ +E TD ++
Sbjct: 130 YRNFIHEKGP-IHVKELALPELVNIIEGLNQNLKLDT-----YLENELKPILES-TD-LI 181
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYPL+ FR++ V D+ R + + + + F +G
Sbjct: 182 LGCTHYPLVHDAFRKIYKGQVH--DSR-------RPICEYVAMNYEFLRSSCQTFTTGDA 232
Query: 257 DIAMRRLMQGF 267
R++ + F
Sbjct: 233 QKMERQIKRLF 243
>gi|227500398|ref|ZP_03930460.1| possible glutamate racemase [Anaerococcus tetradius ATCC 35098]
gi|227217461|gb|EEI82780.1| possible glutamate racemase [Anaerococcus tetradius ATCC 35098]
Length = 250
Score = 185 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 9/217 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ + + Y D + PYG L + D L+K+
Sbjct: 4 IGVFDSGLGGLTVLRELSKTN-KAQYFYFGDTLRVPYGGRSREELIGFACDIV-DFLEKF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNT KD L + + + A+ T G +L T T+
Sbjct: 62 DIDYYVIACNTLSVTAKDFLVDKYKKKFI--PITQMGLRASETYGGSFLVLGTKTTINSH 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ N + ++ ++ L +E + E++ I+ K I
Sbjct: 120 FYKNNLEKIPGNI-VYEKAATKLVDFIESG----NMASSELETYIDSYISLANEKEIANI 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+LACTHYP+I + + +D + A R
Sbjct: 175 ILACTHYPIIKSKIENRLTYKANIIDPAIFAADYLRS 211
>gi|138998736|dbj|BAF51428.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 185 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTKK-VKMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V ACNTA ++ +E++ + LG + P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKL-DIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQ 118
Query: 140 LIHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 119 KILVLSPQMKVRSLACPKFVPIV 141
>gi|87303353|ref|ZP_01086141.1| Glutamate racemase [Synechococcus sp. WH 5701]
gi|87282001|gb|EAQ73963.1| Glutamate racemase [Synechococcus sp. WH 5701]
Length = 276
Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats.
Identities = 49/252 (19%), Positives = 92/252 (36%), Gaps = 18/252 (7%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86
VL++M P+ F+Y+ D PYG+ + +++ + L + Q ++ACNT
Sbjct: 16 TVLRRMLEHHPDLPFVYLGDTARVPYGHRSPNEIRRIAAEVVG-WLREQQVDAVLMACNT 74
Query: 87 AFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145
L D + + G + A+ Q + +L+TPAT +
Sbjct: 75 TNALAFDIAEAEAGEGVPVFGLID---CVASQLQCQRVGVLATPATASSGAYGRALRQAD 131
Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
CH+ + +E+ + ++ +R + IVL CTHYPL+
Sbjct: 132 PSCHVIEIGCPAFVPLIEDG----NFADPRLRAAAIAYLEPLLAERVEAIVLGCTHYPLL 187
Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---------ALFLSGKP 256
+ R+L P V +D + + + L + +Q H ++G
Sbjct: 188 EELLRELLPPEVVLVDPAQAAVAQLGHRLGKSPVYQAPCCGLHPREVPVERGRFCVTGDA 247
Query: 257 DIAMRRLMQGFG 268
+ G
Sbjct: 248 EAFALAAAPWLG 259
>gi|72162561|ref|YP_290218.1| glutamate racemase [Thermobifida fusca YX]
gi|71916293|gb|AAZ56195.1| glutamate racemase [Thermobifida fusca YX]
Length = 256
Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 11/205 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R + P+ I D P+G + R + +LD+
Sbjct: 3 IALVDSGIGLLSTAAALRRIRPDADLILSMDPDYMPWGPRSVPEIVARALAGARAVLDE- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
QP V+ACNTA + LR+ P + +G VPA+K AA + +I +TPAT
Sbjct: 62 QPDAVVVACNTASVHALESLRAELEPRIPVIGTVPAVKPAAD--RGAPFAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +LI + + V+ LA VE + E
Sbjct: 120 PYQRDLIDRFARGIAVTPVACPGLADAVER-------ADPAAVAEAVDHAAAHTPADVSA 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDW 219
+VL CTHY L+ V V
Sbjct: 173 VVLGCTHYDLVSDVITAALGEHVTL 197
>gi|310826435|ref|YP_003958792.1| hypothetical protein ELI_0815 [Eubacterium limosum KIST612]
gi|308738169|gb|ADO35829.1| hypothetical protein ELI_0815 [Eubacterium limosum KIST612]
Length = 269
Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 9/243 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSGIGG VL++++ +P + +Y+ D PYG E+ + L
Sbjct: 4 SSPIGLIDSGIGGFTVLRELQRQLPRENIVYLGDAKRMPYGERENEEIIAFGNSDI-RFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ ++ACNT +L + L + P + + G + +++T AT+
Sbjct: 63 ENMGVKAILLACNTISSL-IESLNANVPLFSI--VEAGCLATIERQKEGAVGLIATTATV 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +++ S+ + LA+ + + + + IK+ I+ F E +R
Sbjct: 120 KNGTYEHILSSHTQALRYITQGTRTLANVINNHPGELALLRQNIKEAIDPIF---ERERV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251
++L CTH+P++ ++ P + +D +D + L + N +D +
Sbjct: 177 SALLLGCTHFPIVRKTIEEMYPC-LSIIDPADKQITLLKEYLEKNNAFNESKYDGVTRIC 235
Query: 252 LSG 254
+G
Sbjct: 236 ATG 238
>gi|238764511|ref|ZP_04625459.1| Glutamate racemase [Yersinia kristensenii ATCC 33638]
gi|238697323|gb|EEP90092.1| Glutamate racemase [Yersinia kristensenii ATCC 33638]
Length = 186
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151
LR F +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I
Sbjct: 3 LPALRERF-DFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTLDLIERFATDCKIE 61
Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
L+ S L E G + + +KK + +E D IVL CTH+PL+ Q
Sbjct: 62 LLGSSELVELAETKLHGGAVPPEALKKILHPWLAMREP--PDTIVLGCTHFPLLSDELAQ 119
Query: 212 LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLK 270
+ P +D+ +IARR L+ + ++ A ++ D A+ ++QG+G
Sbjct: 120 VLPEGTRMVDSGAAIARRTAWLISSQENVVSSQAENIAYCMALNTDTDALLPVLQGYGFP 179
Query: 271 S 271
+
Sbjct: 180 T 180
>gi|284052422|ref|ZP_06382632.1| glutamate racemase [Arthrospira platensis str. Paraca]
Length = 214
Score = 183 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 8/192 (4%)
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ ++ACNT+ L + +RS F + LG + P + A +Q I +++TPAT
Sbjct: 1 MVLMACNTSSALALEVVRSEF-DIPILGLILPGARAAI--SQGERIGVIATPATAASNAY 57
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
I + V +E+ +I + + +R D ++
Sbjct: 58 RQAIQEINPAVQVWQVGCPAFVPLIEQN----RIHDPCTLEAAREYLTPLIQQRIDTLIY 113
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYP + V R L P V +D + + L + + +SG +
Sbjct: 114 GCTHYPHLAPVLRSLLPAAVKLVDPAVHLVEAVAQELELLGLRHGDLPRPTRFCVSGCAE 173
Query: 258 IAMRRLMQGFGL 269
+Q G
Sbjct: 174 QFANLSVQWLGY 185
>gi|213583010|ref|ZP_03364836.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 135
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 56/134 (41%), Positives = 87/134 (64%), Gaps = 1/134 (0%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHI 150
T LI + ++C I
Sbjct: 121 THELIARFANECQI 134
>gi|111023014|ref|YP_705986.1| glutamate racemase [Rhodococcus jostii RHA1]
gi|110822544|gb|ABG97828.1| probable glutamate racemase [Rhodococcus jostii RHA1]
Length = 257
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 12/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ I D G P+G + + R++ LD+
Sbjct: 3 VALIDSGLGMLPTSAWLRKLRPDLDLILALDPDGAPWGPKPEQWVIDRVLATAQRCLDRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ CNTA D +R P++ +G VPAIK AAA +S +++ +T AT
Sbjct: 63 A-EVIVLPCNTASVTALDHVREFVGPAVPVVGTVPAIKPAAAACES--VAVWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI + + + V+ LA ++ +E+
Sbjct: 120 RYQADLIEKFGNGSSVVGVACHGLAEAIDRGERDAATAAIA-------SAVERTPDDVGG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ P V D+++++A + + +N + +FLSG
Sbjct: 173 VVLGCTHYPLMADEIAAQLPAGVRLFDSAEAVATQTLRRIDALN-RPSAGEGTVEVFLSG 231
Query: 255 KP 256
+P
Sbjct: 232 RP 233
>gi|187917978|ref|YP_001883541.1| glutamate racemase [Borrelia hermsii DAH]
gi|119860826|gb|AAX16621.1| glutamate racemase [Borrelia hermsii DAH]
Length = 254
Score = 182 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 16/262 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
L++ I+IFDSGIGGL + + +++Y+AD+ FPYG L K ++ L
Sbjct: 1 MSNLEDVIVIFDSGIGGLSYFEYISKRFVNRNYVYIADNKNFPYGEKSPEFLLKEILELV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y VIACNTA + D+L FP + L +V +++ A + +++T
Sbjct: 61 LKLEQMYNIASIVIACNTASISVYDKLNLRFPIIYTLPSVGLVEELAC----KRVILIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+T+ + ++ L S+ L + VE G + KED ++ + +E E
Sbjct: 117 SSTINSEFVQRE---KKCHWNLILKSASELVNFVE---YGDRFKEDALR-YLRALQLEVE 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
R D++ L CTHY I + PV +N + +A +L I +
Sbjct: 170 ANRRDMVFLGCTHYLHIKDMIESFLGIPV--YENRELVANELAKVLGPIKC--SDNCFIR 225
Query: 249 ALFLSGKPDI-AMRRLMQGFGL 269
+L+ ++ + + +GL
Sbjct: 226 YFYLTQDENLCFYKNFCKRYGL 247
>gi|167949668|ref|ZP_02536742.1| glutamate racemase [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 275
Score = 181 bits (461), Expect = 9e-44, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 6/199 (3%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
H + +R + ++ + VIACNTA LR ++ +G P +K
Sbjct: 2 PKAPHFVAQRAQQITRFLIAQGAKT-IVIACNTATAAAVASLRQQH-TLPIIGMEPGLKP 59
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
A +++G++ IL+T TL +L+ + + + +VE +
Sbjct: 60 GIAASRNGVVGILATEGTLGSAKFRDLLRRHGEGARVIIRPCHGWVRQVES----TDLSG 115
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
K + + D +VL CTH+P + RQ+ P +D ++A+ +
Sbjct: 116 PRALKVVAEEIQPLIDQGVDSLVLGCTHFPFLHQAIRQMVPAKTHIIDTGPAVAKELKRR 175
Query: 234 LPRINTHQTRVFDDHALFL 252
L + +
Sbjct: 176 LVEQGLLRRSTLRGXRCAV 194
>gi|317124440|ref|YP_004098552.1| glutamate racemase [Intrasporangium calvum DSM 43043]
gi|315588528|gb|ADU47825.1| glutamate racemase [Intrasporangium calvum DSM 43043]
Length = 286
Score = 180 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 111/268 (41%), Gaps = 21/268 (7%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D P + + DSGIG L +R L P+ + D PYG +++
Sbjct: 7 DLAPMTTRPPRRVAFVDSGIGLLGYADALRALRPDLELVLALDPDHMPYGPRSPGEVREL 66
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGL 122
++ + + +PV V+ACNTA + LR+ P + +G VPAI+ AA T G
Sbjct: 67 ILASAAAA-AELEPVALVVACNTASVHGLEALRAELEPGLPVIGTVPAIRPAA--TTGGP 123
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+SI ST AT Y L+ ++ S+ H ++++ LA VE + EI + I
Sbjct: 124 VSIWSTAATSSSDYLRGLVDAFASEVETHSIAALGLAEAVEA------VDPAEIDRAIGA 177
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLLPRINT 239
E T +VL CTHY L+ V D+ ++AR+ L RI
Sbjct: 178 ALAE-TPADTRALVLGCTHYGLVADRISAALNSRGSEVTIFDSPVAVARQT---LRRIGL 233
Query: 240 HQTRVFDDHA----LFLSGKPDIAMRRL 263
+ LSG+ RL
Sbjct: 234 EPEEAAVPTRTAPIVLLSGRRGELPERL 261
>gi|160901642|ref|YP_001567223.1| glutamate racemase [Petrotoga mobilis SJ95]
gi|160359286|gb|ABX30900.1| glutamate racemase [Petrotoga mobilis SJ95]
Length = 263
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 109/262 (41%), Gaps = 24/262 (9%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + +P K I +FDSGIGGL VL+K+ + + Y+AD++ PYG+ L
Sbjct: 1 MGVRYFPIMK-----IGLFDSGIGGLTVLKKVIENFGNHEYFYLADNLNVPYGSKPIPFL 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-- 118
++ L + S K + + ACNT +++K ++ F + + +I A T
Sbjct: 56 RENLKNILSFF-QKMKVDFLISACNTTDSIVK---KTNFDTKNYNFTYVSIIDNAIKTIE 111
Query: 119 QSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
++ + +L+T T+ LI ++ + + +EE ++ E ++
Sbjct: 112 RNDTVLLLATENTINLGAYKEALISKKITNLE--EKACPLFVPLIEEGYWDGQMAESVLR 169
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
++ + ++L CTHYP++ R+ + +D +D + + I
Sbjct: 170 FYLQDSKSKYHK-----VILGCTHYPILEKQIRKYTNSS--IVDPADGVVDFLKN---EI 219
Query: 238 NTHQTRVFDDHALFLSGKPDIA 259
+ ++G +
Sbjct: 220 KLERIDGKIKVNFLVTGNLEKF 241
>gi|203284025|ref|YP_002221765.1| glutamate racemase [Borrelia duttonii Ly]
gi|201083468|gb|ACH93059.1| glutamate racemase [Borrelia duttonii Ly]
Length = 254
Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 15/247 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
L++ I+IFDSGIGGL + + + ++IYVAD+ FPYG+ + + + L
Sbjct: 1 MNNLEDVIVIFDSGIGGLAYFEYISKKLFNRNYIYVADNKNFPYGDKSSNFILNEFLELI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S + + Y V V+ACNTA + ++L FP + L +V +K+ + +++T
Sbjct: 61 SKLREIYNIVSIVVACNTASISVYNKLNFNFPIIYTLPSVSLVKELLC----KRVILIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + L S+ L VE I E + + ++ E +
Sbjct: 117 NTTINSEFVKKE---QNNHIDLILKSAGELVKFVEYG----DIFEKDALEYLKSLKFEVQ 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D++ L CTHY I + + + DN +A L N +
Sbjct: 170 STKRDMVFLGCTHYLHIKDMIESVL--EIPVYDNRKIVADELNKSLK--NVENSDYCFKR 225
Query: 249 ALFLSGK 255
+L+
Sbjct: 226 YFYLTQD 232
>gi|203287567|ref|YP_002222582.1| glutamate racemase [Borrelia recurrentis A1]
gi|201084787|gb|ACH94361.1| glutamate racemase [Borrelia recurrentis A1]
Length = 254
Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 15/247 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
L++ I+IFDSGIGGL + + + ++IYVAD+ FPYG+ + + + L
Sbjct: 1 MNNLEDVIVIFDSGIGGLAYFEYISKKLFNRNYIYVADNKNFPYGDKSSNFILNEFLELI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S + + Y V V+ACNTA + ++L FP + L +V +K+ + +++T
Sbjct: 61 SKLREIYNIVSIVVACNTASISVYNKLNFNFPIIYTLPSVSLVKELVF----KRVILIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + L S+ L VE I E + + ++ E +
Sbjct: 117 NTTINSEFVKKE---QNNHIDLILKSAGELVKFVEYG----DIFEKDALEYLKSLKFEVQ 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D++ L CTHY I + + + DN +A L N +
Sbjct: 170 STKRDMVFLGCTHYLHIKDMIESVL--EIPVYDNRKIVADELNKSLK--NVENSDYCFKR 225
Query: 249 ALFLSGK 255
+L+
Sbjct: 226 YFYLTQD 232
>gi|229135328|ref|ZP_04264122.1| Glutamate racemase [Bacillus cereus BDRD-ST196]
gi|228648151|gb|EEL04192.1| Glutamate racemase [Bacillus cereus BDRD-ST196]
Length = 185
Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 71/176 (40%), Gaps = 7/176 (3%)
Query: 95 LRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV 153
++ P + +G + P + A T + + I+ T T++ + S ++ + +
Sbjct: 1 MQKQLP-IPVVGVIHPGSRTALKVTNTYHVGIIGTIGTVKSGAYEEALKSINNRVMVESL 59
Query: 154 SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
+ VE ++ + +++ ++ + D ++L CTHYP++ V +++
Sbjct: 60 ACPPFVELVESGNFESEMAYEVVRETLQ----PLKSTDIDTLILGCTHYPILGPVIKKVM 115
Query: 214 PWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
V + + D AR +L ++ DH +GK + + FG
Sbjct: 116 GDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDHLFLTTGKIGLFKEIASKWFG 171
>gi|227486394|ref|ZP_03916710.1| possible glutamate racemase [Anaerococcus lactolyticus ATCC 51172]
gi|227235575|gb|EEI85590.1| possible glutamate racemase [Anaerococcus lactolyticus ATCC 51172]
Length = 249
Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 9/218 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I IFDSG+GG+ VL ++ + ++ Y+ D++ PYGN + + + L+
Sbjct: 3 NIGIFDSGLGGIAVLNELAKKN-KANYFYLGDNLRVPYGNRSKAEITSFATDIVN-FLEG 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y +IACNT KD LR F A AI+ A Y G L T AT+
Sbjct: 61 YDIDYYIIACNTISVTCKDYLREKFKKKFITIADMAIEAAMEY--DGDYLALGTKATMES 118
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + C ++ ++ L + +E G ++ + ++ K+
Sbjct: 119 HFYKTTLEAKKP-CKVYESKAIDLVNLIE----GGVLEGATLNGALDEYLSIANEKKLAN 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
I+LACTHYP+I + + + +D + +A +
Sbjct: 174 IILACTHYPIIKGEISKRLDYKANIIDPAVFLADNIKT 211
>gi|297567944|ref|YP_003686914.1| Glutamate racemase [Meiothermus silvanus DSM 9946]
gi|296852393|gb|ADH65406.1| Glutamate racemase [Meiothermus silvanus DSM 9946]
Length = 234
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL L+++R L P+ ++Y+AD PYG +++R+ + +L+
Sbjct: 2 TVGVFDSGVGGLAALEELRRLRPDLDYLYLADTAWAPYGPLPPERIRERVEQVGGFLLEA 61
Query: 75 YQPVLSVIACNTAFTL---IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA + LR+ L A+ +QAA + ++ +T AT
Sbjct: 62 GAEAL-VVACNTASAWGAGALEGLRA-----PVLEAIGPTRQAAGREEG--TAVWTTAAT 113
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + ++ + +LA VEE +D + + + G ++E+
Sbjct: 114 WRSGVYRGVGE---------VIPTPLLAPLVEEGHL-----DDRVAEAVVGAYLERLPGG 159
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
T +VL CTHY + + +L+P + +D+
Sbjct: 160 TRRLVLGCTHYSFLRPLLSRLAP-GLALVDS 189
>gi|229490649|ref|ZP_04384487.1| glutamate racemase [Rhodococcus erythropolis SK121]
gi|229322469|gb|EEN88252.1| glutamate racemase [Rhodococcus erythropolis SK121]
Length = 254
Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 13/253 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G + + R++ LD+
Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLVLSLDPDGAPWGPKPEPWVVDRVLGAVRRSLDRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V V+ CNTA +R P + +G VPAIK AAA S ++I +T AT
Sbjct: 63 AQV-IVLPCNTASVTALPHVRELVGPGVPVIGTVPAIKPAAAACDS--VAIWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI + + + V LA ++ + I+ + +
Sbjct: 120 RYQADLIEQFGNGAKVVGVPCHGLADSIDLGDRAAALA--AIESAVAR-----TPDDVNG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ P V D+++++AR+ + + +F+SG
Sbjct: 173 VVLGCTHYPLLADEIAARLPAGVTLFDSAEAVARQTLRRIDGLGD-AGEGSGTVEVFVSG 231
Query: 255 KPDIAMRRLMQGF 267
+P A+ + F
Sbjct: 232 RPG-ALPPSAEAF 243
>gi|226305260|ref|YP_002765218.1| glutamate racemase [Rhodococcus erythropolis PR4]
gi|226184375|dbj|BAH32479.1| glutamate racemase [Rhodococcus erythropolis PR4]
Length = 254
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 13/253 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G + + R++ LD+
Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLVLSLDPDGAPWGPKPEPWVVDRVLGAVRRSLDRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V V+ CNTA +R P + +G VPAIK AAA S ++I +T AT
Sbjct: 63 AQV-IVLPCNTASVTALPHVRELVGPEVPVIGTVPAIKPAAAACDS--VAIWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI + + + V LA ++ + I +
Sbjct: 120 RYQADLIEQFGNGAKVVGVPCHGLADSIDLGDRAAALA--AIDSAVAR-----TPDDVSG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ P V D+++++AR+ + + +F+SG
Sbjct: 173 VVLGCTHYPLLADEIAARLPAGVTLFDSAEAVARQTLRRIDGLGA-AGEGSGTVEVFVSG 231
Query: 255 KPDIAMRRLMQGF 267
+P A+ + F
Sbjct: 232 RPG-ALPPSAEAF 243
>gi|295395118|ref|ZP_06805327.1| glutamate racemase [Brevibacterium mcbrellneri ATCC 49030]
gi|294972066|gb|EFG47932.1| glutamate racemase [Brevibacterium mcbrellneri ATCC 49030]
Length = 310
Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 11/223 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
++ + DSG+G + + +P + D PYG +++R + ++D
Sbjct: 25 PTVGLLDSGLGLVPFAVAVHHELPHANLALAMDPDFAPYGALTSAQIEQRALASARTLVD 84
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACNTA +R F P + +G VPA+K AAA ++ +T AT
Sbjct: 85 AGARAL-VIACNTASVHALSAVRERFEPLVPVIGTVPAVKPAAAT--GAPFAVWATTATT 141
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y +LI Y +++ V+ LA ++ + E + +
Sbjct: 142 GSAYQRSLISMYAGDINVYPVACAGLAQAIDS-------ADPETIDIALSAAVTATPREA 194
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
IVL CTHY L+ PV D+ ++AR+ L
Sbjct: 195 QSIVLGCTHYGLVADRIEAAFDRPVTLFDSPQAVARQLARRLA 237
>gi|328880727|emb|CCA53966.1| Glutamate racemase [Streptomyces venezuelae ATCC 10712]
Length = 264
Score = 175 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 100/249 (40%), Gaps = 18/249 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + D G P+G L R + + + +
Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLLLSNDPDGMPWGPRTPEDLTGRALAVALAAAE-H 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA +R+ P +A +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPQALIVACNTATVHALPAIRAALEPDIAVIGTVPAIKPAAAG--GGKVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE + E +
Sbjct: 120 AYQRGLIRDFADGAEVTEVPCPGLADAVEH-------ADPEAVDRAVAAAAALTPRDVRT 172
Query: 195 IVLACTHYPLIVHVFRQLSP-------WPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+VL CTHY L+ P+ + ++D++A +A +
Sbjct: 173 VVLGCTHYELVEERILAALDARGRAGLPPIVFHGSADAVAAQALRRVGAEPAPAAAPTGT 232
Query: 248 HALFLSGKP 256
++ LSG+P
Sbjct: 233 LSVLLSGRP 241
>gi|297195902|ref|ZP_06913300.1| glutamate racemase [Streptomyces pristinaespiralis ATCC 25486]
gi|297152990|gb|EFH32086.1| glutamate racemase [Streptomyces pristinaespiralis ATCC 25486]
Length = 270
Score = 173 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 98/245 (40%), Gaps = 17/245 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + R + + +
Sbjct: 12 IALMDSGIGLLAAAAVVRTLRPDADLVLSSDPGSMPWGPRTPDDVAGRAL-TVARAAAAH 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ PS+ +G VPAIK AAA G ++I +TPAT
Sbjct: 71 KPDALIVACNTASVHALPALRAELEPSIPVIGTVPAIKPAAAG--GGPVAIWATPATTGS 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE +D I + + +
Sbjct: 129 PYQRGLIKEFAGSVEVTEVPCPGLADAVERA------DKDAIDRAVAAA-AALTPRDVRA 181
Query: 195 IVLACTHYPLIVHVFRQL-----SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R P V ++ ++A +A +
Sbjct: 182 VVLGCTHYELVSERIRAAVQQPGLPPLV-LHGSAGAVAAQALRRIGAEPAPDASPSGRLT 240
Query: 250 LFLSG 254
+ LSG
Sbjct: 241 VLLSG 245
>gi|21219535|ref|NP_625314.1| glutamate racemase [Streptomyces coelicolor A3(2)]
gi|11071227|emb|CAC14386.1| putative glutamate racemase [Streptomyces coelicolor A3(2)]
Length = 280
Score = 172 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 95/245 (38%), Gaps = 15/245 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ I D G P+G L R + ++ +
Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPKDLTGRALG-VAEAAAAH 80
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT
Sbjct: 81 RPDALIVGCNTATVHALPALRARLEPDVPVIGTVPAIKPAAAG--GGPVAIWATPATTGS 138
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE ++ E
Sbjct: 139 PYQRGLIEDFAGDTEVTEVPCPGLADAVEH-------ADETAITEAVAAAAALTPDDVTT 191
Query: 195 IVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+VL CTHY L+ R P + ++ ++A +A + +
Sbjct: 192 VVLGCTHYELVAERIRAAVQRPGAPRLVLHGSAGAVAAQALRRIGARPDPGAPATGTLTV 251
Query: 251 FLSGK 255
LSG+
Sbjct: 252 LLSGR 256
>gi|46404909|gb|AAS93325.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + G GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYGSLAPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|126348285|emb|CAJ90006.1| putative glutamate racemase [Streptomyces ambofaciens ATCC 23877]
Length = 280
Score = 172 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 96/245 (39%), Gaps = 15/245 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ I D G P+G L R + + +
Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPEDLTGRALAVAEAA-AAH 80
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ CNTA LR+ F P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 81 RPDALIVGCNTATVHALPALRARFEPALPVIGTVPAIKPAAAG--GGPVAIWATPATTGS 138
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +LI + + + V LA VE +
Sbjct: 139 PYQRDLIERFGGEATVTEVPCPGLADAVEHADEAAITAAVAAAAALTP-------GDVTT 191
Query: 195 IVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+VL CTHY L+ R P + ++ ++A +A + +
Sbjct: 192 VVLGCTHYELVAERIRAAVQRPGAPRLVLHGSAGAVAAQALRRIGVRPDPGAPAEGTLTV 251
Query: 251 FLSGK 255
LSG+
Sbjct: 252 LLSGR 256
>gi|12055979|emb|CAC21113.1| glutamate racemase [Streptococcus pyogenes]
gi|14475677|gb|AAK62688.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 172 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055961|emb|CAC21098.1| glutamate racemase [Streptococcus pyogenes]
gi|33521549|gb|AAQ20062.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055941|emb|CAC21088.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++T + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKATL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055935|emb|CAC21085.1| glutamate racemase [Streptococcus pyogenes]
gi|12055939|emb|CAC21087.1| glutamate racemase [Streptococcus pyogenes]
gi|12055949|emb|CAC21092.1| glutamate racemase [Streptococcus pyogenes]
gi|12055967|emb|CAC21107.1| glutamate racemase [Streptococcus pyogenes]
gi|14475673|gb|AAK62686.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|14475679|gb|AAK62689.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|46404931|gb|AAS93336.1| glutamate racemase [Streptococcus pyogenes]
gi|46404933|gb|AAS93337.1| glutamate racemase [Streptococcus pyogenes]
gi|115394063|gb|ABI97001.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|33521545|gb|AAQ20060.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKLTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055943|emb|CAC21089.1| glutamate racemase [Streptococcus pyogenes]
gi|12055947|emb|CAC21091.1| glutamate racemase [Streptococcus pyogenes]
gi|12055953|emb|CAC21094.1| glutamate racemase [Streptococcus pyogenes]
gi|12055969|emb|CAC21108.1| glutamate racemase [Streptococcus pyogenes]
gi|14475675|gb|AAK62687.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|33521547|gb|AAQ20061.1| glutamate racemase [Streptococcus pyogenes]
gi|33521551|gb|AAQ20063.1| glutamate racemase [Streptococcus pyogenes]
gi|33521557|gb|AAQ20066.1| glutamate racemase [Streptococcus pyogenes]
gi|46404925|gb|AAS93333.1| glutamate racemase [Streptococcus pyogenes]
gi|115394071|gb|ABI97005.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055977|emb|CAC21112.1| glutamate racemase [Streptococcus pyogenes]
gi|46404923|gb|AAS93332.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|46404919|gb|AAS93330.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKLTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055933|emb|CAC21084.1| glutamate racemase [Streptococcus pyogenes]
gi|12055963|emb|CAC21101.1| glutamate racemase [Streptococcus pyogenes]
gi|12055975|emb|CAC21111.1| glutamate racemase [Streptococcus pyogenes]
gi|46404921|gb|AAS93331.1| glutamate racemase [Streptococcus pyogenes]
gi|46404927|gb|AAS93334.1| glutamate racemase [Streptococcus pyogenes]
gi|115394065|gb|ABI97002.1| glutamate racemase [Streptococcus pyogenes]
gi|115394067|gb|ABI97003.1| glutamate racemase [Streptococcus pyogenes]
gi|115394069|gb|ABI97004.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055937|emb|CAC21086.1| glutamate racemase [Streptococcus pyogenes]
gi|12055955|emb|CAC21095.1| glutamate racemase [Streptococcus pyogenes]
gi|12055973|emb|CAC21110.1| glutamate racemase [Streptococcus pyogenes]
gi|46404903|gb|AAS93322.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|46404915|gb|AAS93328.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVTSDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|33521553|gb|AAQ20064.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLVPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055957|emb|CAC21096.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055945|emb|CAC21090.1| glutamate racemase [Streptococcus pyogenes]
gi|12055959|emb|CAC21097.1| glutamate racemase [Streptococcus pyogenes]
gi|12055971|emb|CAC21109.1| glutamate racemase [Streptococcus pyogenes]
gi|46404913|gb|AAS93327.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|33521555|gb|AAQ20065.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|46404905|gb|AAS93323.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAATKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|46404917|gb|AAS93329.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPRFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|289809548|ref|ZP_06540177.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 169
Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168
PAIK AA T +G++ +L+T AT++R YT LI + ++C I ++ S L E G
Sbjct: 2 PAIKPAARLTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHG 61
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ +E+++ + E D +VL CTH+PL+ Q+ P +D+ +IAR
Sbjct: 62 DSVSLEELRRILRPWLRMPEP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIAR 119
Query: 229 RARCLLPRINTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
R LL + A ++ P + ++Q +G ++
Sbjct: 120 RTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 163
>gi|225010450|ref|ZP_03700921.1| Glutamate racemase [Flavobacteria bacterium MS024-3C]
gi|225005279|gb|EEG43230.1| Glutamate racemase [Flavobacteria bacterium MS024-3C]
Length = 138
Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I FDSG+GG V + L+P IYVAD PYG + + ++
Sbjct: 6 GPIGFFDSGVGGTSVWSAVNNLLPNESTIYVADSANAPYGERSAETILALSIKNTDFLIS 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K L V+ACNTA T LR + + F+G PAIK AA T +G + +L+T TL
Sbjct: 66 KG-CKLIVVACNTATTNAIAVLREKY-IIPFIGIEPAIKPAALQTLTGKVGLLATKGTLG 123
Query: 134 RTYTSNLIHSYVSQ 147
+
Sbjct: 124 SALFHKTVLENAGG 137
>gi|198385967|gb|ACH86246.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis]
gi|209486171|gb|ACI48541.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis]
Length = 146
Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVTSLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|226365519|ref|YP_002783302.1| glutamate racemase [Rhodococcus opacus B4]
gi|226244009|dbj|BAH54357.1| glutamate racemase [Rhodococcus opacus B4]
Length = 257
Score = 171 bits (435), Expect = 9e-41, Method: Composition-based stats.
Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 12/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L PE I D G P+G + + R++ +D+
Sbjct: 3 VALIDSGLGMLPTAAWLRKLRPELDLILALDPDGAPWGPKPEQWVIDRVLATAQRSVDRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ CNTA D +R P + +G VPAIK AAA S + AT
Sbjct: 63 A-EVIVLPCNTASVTALDHVREFVGPQVPVVGTVPAIKPAAAAFASVAVWAT--AATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI + + + V+ LA ++ E E E+
Sbjct: 120 RYQADLIEKFGNGSSVVGVACHGLAEAIDRG-------EREAAAAAIASAAERTPGDVGA 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ P V D+++++A + + +N T +FLSG
Sbjct: 173 VVLGCTHYPLMADEIAARLPAGVRLFDSAEAVAAQTLRRIDALNRPSTGE-GTVEVFLSG 231
Query: 255 KP 256
+P
Sbjct: 232 RP 233
>gi|161527572|ref|YP_001581398.1| glutamate racemase [Nitrosopumilus maritimus SCM1]
gi|160338873|gb|ABX11960.1| Glutamate racemase [Nitrosopumilus maritimus SCM1]
Length = 251
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 17/256 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+G L ++++M+ IY AD +PYG L +R+M ++L+K+
Sbjct: 4 IAVFDSGLGSLSIIKEMQKAFKSE-IIYFADQQSYPYGKKSQAQL-ERIMRKSINLLEKF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P V+A NT L+ D + P +K+A T+S I IL+T + +
Sbjct: 62 SPDFIVVASNTPS-LMLD-----LGTNRIFVVKPPLKEAKKITKSKQIGILATESATKSK 115
Query: 136 YTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
S I + + I ++ L VE + K E K I+ + D
Sbjct: 116 GLSKYIQENIPKSFKIFKINGTKLVDLVESGKFLTEKKYCE--KIIKKKLEILNENQIDA 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+ L+ TH P + + P + ++D + +A++ +I Q++ + +F SG
Sbjct: 174 VTLSSTHLPFLKKYLEKEFP-NIQFVDPGNIVAQKIYF---KIKNKQSKK-NSLKIFTSG 228
Query: 255 KPDIAMRRLMQGFGLK 270
+L + G+K
Sbjct: 229 NTKEFQLKLSK-IGIK 243
>gi|46404929|gb|AAS93335.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGSSVKLIDSGAECVRDISVL 146
>gi|12055951|emb|CAC21093.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSIQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRSIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|162147611|ref|YP_001602072.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786188|emb|CAP55770.1| putative glutamate racemase [Gluconacetobacter diazotrophicus PAl
5]
Length = 224
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 3/201 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+D P L VIACNTA TL LR + ++ F+G VP IK AA +++ I +L+T AT
Sbjct: 13 IDALDPDLVVIACNTASTLALPALRERY-TLPFVGCVPPIKWAAELSRTRTIGLLATRAT 71
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR Y +L Y C + + LA E G I D I +E++ F + G
Sbjct: 72 VRRPYLGDLQRRYAPDCTLLAHGARGLADLAECAFRGHAIATDAIDRELDALFGQPGGAA 131
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+ + CTHY ++ R SP WLD ++++AR+A +L + T A F
Sbjct: 132 IDVVGIGCTHYTFLMDRLRAASPPGTIWLDPAEAVARQAATVLGPLGT-AVPSRPARAFF 190
Query: 252 LSGKPDIA-MRRLMQGFGLKS 271
+ + + M G +
Sbjct: 191 TAAPAEPERLAAAMAPLGYGA 211
>gi|256789389|ref|ZP_05527820.1| glutamate racemase [Streptomyces lividans TK24]
gi|289773278|ref|ZP_06532656.1| glutamate racemase [Streptomyces lividans TK24]
gi|289703477|gb|EFD70906.1| glutamate racemase [Streptomyces lividans TK24]
Length = 280
Score = 170 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 94/245 (38%), Gaps = 15/245 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ I D G P+G L R + + +
Sbjct: 22 IALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPKDLTGRALAVAEAA-AAH 80
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT
Sbjct: 81 RPDALIVGCNTATVHALPALRARLEPDVPVIGTVPAIKPAAAG--GGPVAIWATPATTGS 138
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE ++ E
Sbjct: 139 PYQRGLIEDFAGDTEVTEVPCPGLADAVEH-------ADETAITEAVAAAAALTPDDVTT 191
Query: 195 IVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+VL CTHY L+ R P + ++ ++A +A + +
Sbjct: 192 VVLGCTHYELVAERIRAAVQRPGAPRLVLHGSAGAVAAQALRRIGARPDPGAPATGTLTV 251
Query: 251 FLSGK 255
LSG+
Sbjct: 252 LLSGR 256
>gi|119952902|ref|YP_945111.1| glutamate racemase [Borrelia turicatae 91E135]
gi|119861673|gb|AAX17441.1| glutamate racemase [Borrelia turicatae 91E135]
Length = 254
Score = 170 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 26/267 (9%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
L+N I+IFDSG+GGL + + + +++YVAD+ FPYG L K ++ L
Sbjct: 1 MSNLKNVIVIFDSGVGGLSYFEYISKRFVKRNYVYVADNKNFPYGEKSSDFLLKEILELI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y VIACNTA + D+L +FP + L +V +++ A + +++T
Sbjct: 61 LKLEQMYNVAAIVIACNTASISVYDKLNFSFPVIYTLPSVCLVEELAY----KRVILVAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + L + L + VE G + KED + K + +E +
Sbjct: 117 HATINSKFIQRE---KDCHWDLILKPASELVNFVE---YGDRFKEDAL-KYLNFLKLEVK 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV----DWLDNSDSIARRARCLLPRINTHQTRV 244
R D++ L CTHY I + PV + + L+ + + ++R
Sbjct: 170 ASRRDMVFLGCTHYLHIKDMIENFLGIPVYENRELV---------TNELIKELKSIESRD 220
Query: 245 FDDHA-LFLSGKPDI-AMRRLMQGFGL 269
+L+ ++ + + +GL
Sbjct: 221 DCFTRYFYLTQDENLYFYKNFCKKYGL 247
>gi|46404907|gb|AAS93324.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 170 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + I+ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGIIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|14475685|gb|AAK62692.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|198385961|gb|ACH86243.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis]
Length = 146
Score = 170 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVISLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055965|emb|CAC21103.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 170 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSSLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|14475687|gb|AAK62693.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVVSLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|46404911|gb|AAS93326.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLSPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGRSVKLIDSGAECVRDISVL 146
>gi|14475681|gb|AAK62690.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|14475683|gb|AAK62691.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|14475691|gb|AAK62695.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|307325961|ref|ZP_07605160.1| Glutamate racemase [Streptomyces violaceusniger Tu 4113]
gi|306888453|gb|EFN19440.1| Glutamate racemase [Streptomyces violaceusniger Tu 4113]
Length = 259
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 15/217 (6%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L MR L P+ + +D P+G + + + + ++P
Sbjct: 1 MDSGIGLLPTAAAMRRLRPDADLLLSSDPATMPWGPRTPEDVTELALG-CARAAAAHRPD 59
Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++ACNTA LR+ P + +G VPAIK AAA G I+I +TPAT Y
Sbjct: 60 ALIVACNTASVHALPALRAELEPVLPVVGTVPAIKPAAAG--GGPIAIWATPATTGSPYQ 117
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + + V LA V+ +DE + + +VL
Sbjct: 118 RGLIRDFADGVEVTEVPCPGLADAVQH-------ADDEGIDAAVAAAAARTPREVTTVVL 170
Query: 198 ACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRA 230
CTHY L+ R P+ ++ ++A +A
Sbjct: 171 GCTHYELVADRIRAAVQQPAAPPIALHGSAGAVAAQA 207
>gi|198250339|gb|ACH85186.1| glutamate racemase [Streptococcus canis]
Length = 146
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTITSDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ A VE +I KK + GK D +VL CTH
Sbjct: 60 QLLAPSVTVTSLACPKFAPIVESN----EIHSSVAKKVVYKSLAPLVGK-VDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|297162715|gb|ADI12427.1| putative glutamate racemase [Streptomyces bingchenggensis BCW-1]
Length = 274
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 79/199 (39%), Gaps = 11/199 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L + L P+ + +D P+G + +R + +
Sbjct: 3 IALMDSGIGLLPAAAAVHRLRPDADLVLSSDPGSMPWGPRTPEDVTQRALACVRAA-AAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ P + +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIVACNTASVHALSALRAELEPGLPVIGTVPAIKPAAAG--GGPVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V+ LA V+ + +
Sbjct: 120 PYQRRLISDFADGVTVTEVACPGLAEAVQRADSAAIDAAV-------ADAAARTPRDIRA 172
Query: 195 IVLACTHYPLIVHVFRQLS 213
+VL CTHY L+ R
Sbjct: 173 LVLGCTHYELVADRIRAAV 191
>gi|14475695|gb|AAK62697.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDMSVL 146
>gi|302562067|ref|ZP_07314409.1| glutamate racemase [Streptomyces griseoflavus Tu4000]
gi|302479685|gb|EFL42778.1| glutamate racemase [Streptomyces griseoflavus Tu4000]
Length = 264
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 98/245 (40%), Gaps = 15/245 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + D G P+G L +R + + +
Sbjct: 3 IALMDSGIGLLAATAAVRRLRPDADLVLSLDPDGMPWGPRTPQDLTERALAVAEAA-AAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIVGCNTATVHALTALRARLEPGLPVIGTVPAIKPAAAG--GGPLAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +LI + + V LA VE ++ E
Sbjct: 120 PYQRDLIEDFAGGVAVTQVPCWGLAEAVER-------ADETAIDAAVAAAAELTPDEVTT 172
Query: 195 IVLACTHYPLIVHVFRQLS--P--WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+VL CTHY L+ R P P+ ++ ++A +A L Q +
Sbjct: 173 VVLGCTHYELVGERIRAAVQRPGRPPLALHGSAGAVAAQALRRLGGRPAPQAPPSGTLTV 232
Query: 251 FLSGK 255
LSG+
Sbjct: 233 LLSGR 237
>gi|326439557|ref|ZP_08214291.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064]
Length = 281
Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 113/269 (42%), Gaps = 16/269 (5%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I + DSGIG L +R L P+ + D G P+G + +R +
Sbjct: 14 PVDYGDRVKIALMDSGIGLLAAAAAVRGLRPDADLVLSQDPDGMPWGPRTPEGVTERALA 73
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISI 125
+ ++ P ++ACNTA LR+ P++ +G VPAIK AA G I+I
Sbjct: 74 VARAA-AEHAPDALIVACNTATVHALPALRAALEPAIPVIGTVPAIKPAAVA--GGPIAI 130
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+TPAT Y +LI + + V LA V+ +DE
Sbjct: 131 WATPATTGSPYQRDLIGRFAGAVDVAEVPCPGLADAVDH-------ADDEAIDRAVAAAA 183
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ + T +VL CTHY L+ R PV ++ ++A +A +
Sbjct: 184 ARTPRDTRAVVLGCTHYELVAERIRDAIGTPVALHGSAGAVAAQALRRIGAAPAPGATAS 243
Query: 246 DDHALFLSGK----PDIAMRRLMQGFGLK 270
+ LSG+ PD A+R +G GL+
Sbjct: 244 GTLTVLLSGRASALPDRALRY-AEGRGLQ 271
>gi|198385963|gb|ACH86244.1| glutamate racemase [Streptococcus canis]
gi|198385965|gb|ACH86245.1| glutamate racemase [Streptococcus canis]
gi|209486169|gb|ACI48540.1| glutamate racemase [Streptococcus canis]
Length = 146
Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAVL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTITSDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ A VE +I KK + GK D +VL CTH
Sbjct: 60 QLLAPSVTVTSLACPKFAPIVESN----EIHSSVAKKVVYKSLAPLVGK-VDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D+ R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|329941791|ref|ZP_08291056.1| glutamate racemase [Streptomyces griseoaurantiacus M045]
gi|329299508|gb|EGG43408.1| glutamate racemase [Streptomyces griseoaurantiacus M045]
Length = 261
Score = 169 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 15/245 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D G P+G L R + + +
Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLVLSSDPEGMPWGPRTPEDLTVRALAVAEAA-AAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ P + +G VPAIK AAA G +I +TPAT
Sbjct: 62 RPDALIVACNTASVHTLPTLRARLEPGLPVIGTVPAIKPAAAG--GGPFAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + + V+ LA V+ +
Sbjct: 120 PYQRGLIEEFAAGLDVAEVACPGLAEAVQHADEAAIDAAI-------ADAAARTPGDVTT 172
Query: 195 IVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+VL CTHY L+ R P + ++ ++A +A + + + +
Sbjct: 173 VVLGCTHYELVAERIRAALRGPGRSPLVLHGSATAVAAQALRRIGALPDPEATTRGTLTV 232
Query: 251 FLSGK 255
LSG+
Sbjct: 233 LLSGR 237
>gi|46404935|gb|AAS93338.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E+++ + LG V P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE ++ KK + GK D +VL CTH
Sbjct: 60 QLLAPSVQVRSLACPKFVPIVESN----EMCSSIAKKIVYDSLAPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + ++ V +D+ R L
Sbjct: 115 YPLLRPIIQNVTGPSVKLIDSGAECVRDISVL 146
>gi|14475689|gb|AAK62694.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 168 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 7/150 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
YPL+ + + + V +D+ R
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDSGAECVRDIS 144
>gi|223984567|ref|ZP_03634697.1| hypothetical protein HOLDEFILI_01992 [Holdemania filiformis DSM
12042]
gi|223963472|gb|EEF67854.1| hypothetical protein HOLDEFILI_01992 [Holdemania filiformis DSM
12042]
Length = 244
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 24/249 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL +L K+R P+ F+Y+AD PYG+ D L+ L + L+K
Sbjct: 2 IGVFDSGIGGLRLLDKLRQRWPQEDFVYLADQAHVPYGSL-DRDTLLDLLQLNLNWLEKQ 60
Query: 76 QPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA I R + + +Q A T+ I +L+TP T +
Sbjct: 61 GADRIVVACNTASATGIARRYRGQAQIVEIIS--KTCEQIPASTE--KILVLATPFTAQS 116
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
++ + Q + V LA +E C + E +K E+ D+
Sbjct: 117 HRYQQVLARQLPQAEVKEVGLSCLAFMIEH-LCPKQEIETYLKGELNAY-----RNGFDL 170
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
VLACTH+P F ++ + +D+ +SIA + + +G
Sbjct: 171 AVLACTHFPFARDQFAKVLG--IPLIDS-ESIA---------LEAPAQPGQGTLRIATTG 218
Query: 255 KPDIAMRRL 263
++ R+L
Sbjct: 219 SVELLTRQL 227
>gi|239983757|ref|ZP_04706281.1| glutamate racemase [Streptomyces albus J1074]
gi|291455563|ref|ZP_06594953.1| glutamate racemase [Streptomyces albus J1074]
gi|291358512|gb|EFE85414.1| glutamate racemase [Streptomyces albus J1074]
Length = 261
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 61/248 (24%), Positives = 94/248 (37%), Gaps = 15/248 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G L + + +
Sbjct: 3 IALVDSGIGLLPAAAAVRRLRPDADLVLSSDPDSMPWGPRTPEDLSAHALAVAEAAAEHA 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA LR F P + +G VPAIK AAA G ++I +TPAT
Sbjct: 63 PDAL-VVACNTASVHALPALRERFEPGLPVIGTVPAIKPAAAA--GGHVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V+ LA V + + +
Sbjct: 120 PYQRRLIAEFSGSTPVTEVACPGLADAV-------QWDDPTAVAAAIADAAARTPSTVTS 172
Query: 195 IVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+VL CTHY L+ R P+ ++ ++A +A L +
Sbjct: 173 VVLGCTHYELVGDAIRTAVEHSGTGPLTLHGSAPAVAAQALRRLGVAPDPAAPATGTLTV 232
Query: 251 FLSGKPDI 258
L+G+ +
Sbjct: 233 LLNGRAEP 240
>gi|14475693|gb|AAK62696.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 7/152 (4%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + +E++ + LG + P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEAL-DIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKI 59
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ ++ VE +I+ KK + GK D +VL CTH
Sbjct: 60 QLLAPTVEVASLACPKFVPIVESN----EIRSSVAKKVVYESLTPLVGK-IDTLVLGCTH 114
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
YPL+ + + + V +D R L
Sbjct: 115 YPLLRPIIQNVMGPSVKLIDRGAECVRDLSVL 146
>gi|332296003|ref|YP_004437926.1| glutamate racemase [Thermodesulfobium narugense DSM 14796]
gi|332179106|gb|AEE14795.1| glutamate racemase [Thermodesulfobium narugense DSM 14796]
Length = 277
Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 15/233 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEY--HFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GG+ +L + YVAD + PYGN + L+ + + S L+
Sbjct: 3 IGIFDSGLGGVNILNSIINSNSPLIGDIFYVADTINVPYGNKDIEELELIVGNIIS-FLE 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
L + ACNT+ + + ++L+ + +G P I + IL+T T+
Sbjct: 62 NKGCELIISACNTSSSTVLNKLKQK-TKIPIIGTIEPTINFVKETFHHKNLIILATKVTI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
N + +++ V+ L +E ++I ED + + ++ I+
Sbjct: 121 ESKIFENALS--ACDYNVYPVACPKLVDAIEFMNPSLEI-EDLLNRYLQ---IDINASEP 174
Query: 193 DVIVLACTHYPLIVHVFRQL----SPWPVDWLDNSDSIARRARCLLPRINTHQ 241
I+L CTHYPLI +++ + LD + I+ A L+ + +
Sbjct: 175 IGILLGCTHYPLIKSQIKEVASKRFSNEIIILDPCERISSEALNLISKDSLIN 227
>gi|302549431|ref|ZP_07301773.1| glutamate racemase [Streptomyces viridochromogenes DSM 40736]
gi|302467049|gb|EFL30142.1| glutamate racemase [Streptomyces viridochromogenes DSM 40736]
Length = 283
Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 66/246 (26%), Positives = 92/246 (37%), Gaps = 17/246 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + D G P+G L +R + + +
Sbjct: 3 IALMDSGIGLLAATTAVRRLRPDADLVLSLDPDGMPWGPRTPENLTERALAVAEAAAARR 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V CNTA LR+ F P + +G VPAIK AAA G +I +TPAT
Sbjct: 63 PDALIV-GCNTATVHALTALRARFEPDLPVIGTVPAIKPAAAG--GGHFAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
TY LI + + V LA VE +
Sbjct: 120 TYQRTLIRDFADGVPVTEVPCWGLAEAVEHADEAAIAAAVAAAAALTP-------DEVTT 172
Query: 195 IVLACTHYPLIVHVFRQLS-----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R P V ++ ++A +A L
Sbjct: 173 VVLGCTHYELVAERIRAAVQRPGRPPLV-LHGSAGAVAAQALRRLGEQPAPSATPLGTLT 231
Query: 250 LFLSGK 255
+ LSG+
Sbjct: 232 VLLSGR 237
>gi|207093320|ref|ZP_03241107.1| glutamate racemase [Helicobacter pylori HPKX_438_AG0C1]
Length = 156
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY---TQSGLISILSTPATL 132
Q L ++ACNTA L +E++ + +G + A ++ I +L T AT+
Sbjct: 62 QIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164
+ N + ++ +++ + +EE
Sbjct: 121 QSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE 151
>gi|213855738|ref|ZP_03383978.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 118
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 50/118 (42%), Positives = 78/118 (66%), Gaps = 1/118 (0%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKR 118
>gi|297197689|ref|ZP_06915086.1| glutamate racemase [Streptomyces sviceus ATCC 29083]
gi|297146828|gb|EFH28366.1| glutamate racemase [Streptomyces sviceus ATCC 29083]
Length = 262
Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 91/246 (36%), Gaps = 17/246 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + D G P+G + R + L +
Sbjct: 3 IALLDSGIGLLAATAAVRRLRPDADLVLSLDPDGMPWGPRTPDDIIGRALTLAEAA-AAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
P +I CNTA LR+ P + +G VPAIK AA + G +I +TPAT
Sbjct: 62 GPEALIIGCNTATVHALTALRARLEPDLPVIGTVPAIKPAA--SAGGPFAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y L+ + V LA VE + +
Sbjct: 120 PYQRGLLAEFADGVPATEVPCHGLAEAVEHADEAAIDAAVAAAAALTP-------EDVTT 172
Query: 195 IVLACTHYPLIVHVFRQLS-----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R P V ++ ++A +A + +
Sbjct: 173 VVLGCTHYELVAERIRAAVQRPGRPPLV-LHGSAGAVAAQALRRIGEQPAPEAAATGTLT 231
Query: 250 LFLSGK 255
+ LSG+
Sbjct: 232 VLLSGR 237
>gi|294811101|ref|ZP_06769744.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064]
gi|294323700|gb|EFG05343.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064]
Length = 256
Score = 164 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 70/257 (27%), Positives = 108/257 (42%), Gaps = 16/257 (6%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L +R L P+ + D G P+G + +R + + ++ P
Sbjct: 1 MDSGIGLLAAAAAVRGLRPDADLVLSQDPDGMPWGPRTPEGVTERALAVARAA-AEHAPD 59
Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++ACNTA LR+ P++ +G VPAIK AA G I+I +TPAT Y
Sbjct: 60 ALIVACNTATVHALPALRAALEPAIPVIGTVPAIKPAAVA--GGPIAIWATPATTGSPYQ 117
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+LI + + V LA V+ +DE + + T +VL
Sbjct: 118 RDLIGRFAGAVDVAEVPCPGLADAVDH-------ADDEAIDRAVAAAAARTPRDTRAVVL 170
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK-- 255
CTHY L+ R PV ++ ++A +A + + LSG+
Sbjct: 171 GCTHYELVAERIRDAIGTPVALHGSAGAVAAQALRRIGAAPAPGATASGTLTVLLSGRAS 230
Query: 256 --PDIAMRRLMQGFGLK 270
PD A+R +G GL+
Sbjct: 231 ALPDRALRY-AEGRGLQ 246
>gi|254485925|ref|ZP_05099130.1| putative glutamate racemase [Roseobacter sp. GAI101]
gi|214042794|gb|EEB83432.1| putative glutamate racemase [Roseobacter sp. GAI101]
Length = 189
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 14/164 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V ++ +P+ F+Y+AD PYG + + + D
Sbjct: 2 AVGIFDSGLGGLTVWNAVQAQLPDVEFVYLADSAHAPYGVRTSDDIYNLTVAATQRLFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSG----------- 121
L ++ACNTA ++ ++ LG + ++ Q G
Sbjct: 62 G-CDLVILACNTASAAALRRMQESWVPSDKRVLGVFVPLIESMTERQWGDNSPPREVDLK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY 165
+++ +TPAT+ + + + + +E+
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG 164
>gi|212637364|ref|YP_002313889.1| glutamate racemase [Shewanella piezotolerans WP3]
gi|212558848|gb|ACJ31302.1| Glutamate racemase [Shewanella piezotolerans WP3]
Length = 273
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I IFD+GIG + +K+R P+ +Y+AD FPYG+ L + + +
Sbjct: 1 MQKAIAIFDAGIGSYSITEKLRKAFPKADLVYLADRASFPYGHKTQPELLSLIYSAMNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
D Y P L V+A N + +++R + +G P +K+A + S L+ +L +
Sbjct: 61 QDNYSPQLIVLASNVPSVTVLEQVRE-LIDVPIIGVYPPVKKALDISTSSLVGVLGVKSL 119
Query: 132 LRRTYTSNLIHSYV-SQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
+ + I + V + L VE E+ + ++ +K+ I+ ++
Sbjct: 120 VCSEQMTRYIENNVIKGQQAKSFDASELVHLVESGEFLFNQEKTKETVKRYIDTLLVQY- 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D L+ TH P + F L P +++LD +D + R +
Sbjct: 179 -PTMDTFTLSSTHLPWLWDYFTTLYP-TLNFLDPADDVVAGIRSV 221
>gi|260905616|ref|ZP_05913938.1| glutamate racemase [Brevibacterium linens BL2]
Length = 268
Score = 162 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 15/232 (6%)
Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88
+ L P I D PYG+ AL+ R + + +L ++P VIACNTA
Sbjct: 17 ADALFHLAPHADLILAMDPDFTPYGSLSPEALEARALNSAA-VLAAWEPDAIVIACNTAS 75
Query: 89 TLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
+ +R+ + P + +G VPA+K AA Q +I +TPAT Y NLI ++ ++
Sbjct: 76 VQALETVRARYEPDIPVIGTVPAVKMAAGTGQD--FAIWATPATTGSAYQQNLIDTFAAE 133
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ V+ LA + + I I+ + + + IVL CTHY L+
Sbjct: 134 VAVSPVACPGLAEAI------NEADIATIDSAIDAALDQMD-PGMETIVLGCTHYGLVAE 186
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLL----PRINTHQTRVFDDHALFLSGK 255
+ D+ +A++ + + Q + A + SG+
Sbjct: 187 RIMAARAGAITLFDSPIPVAKQTLRRIGIDAHGVGPGQPDTGEVIATYASGR 238
>gi|121730805|ref|ZP_01682883.1| ATPase of the AAA+ class [Vibrio cholerae V52]
gi|121627620|gb|EAX60302.1| ATPase of the AAA+ class [Vibrio cholerae V52]
Length = 129
Score = 162 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + ++++
Sbjct: 9 VLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVEQE 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++R
Sbjct: 69 RIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVKRQ 126
Query: 136 YTS 138
YT
Sbjct: 127 YTQ 129
>gi|290962603|ref|YP_003493785.1| glutamate racemase [Streptomyces scabiei 87.22]
gi|260652129|emb|CBG75261.1| putative glutamate racemase [Streptomyces scabiei 87.22]
Length = 268
Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 18/236 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D G P+G L +R + + +
Sbjct: 3 IALMDSGIGLLPAAAAVRRLRPDADLVISSDPDGMPWGPRTPQDLTERALAVATAAAAHA 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V CNTA LR+ P + +G VPAIK AA + G +I +TPAT
Sbjct: 63 PDALIV-GCNTASVHALPALRALLEPGLPVIGTVPAIKPAA--SGGGPFTIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE +
Sbjct: 120 PYQRGLIEEFAGGVAVTEVPCWGLAEAVEHADDAAIDAAIAAAAALTP-------ADVTT 172
Query: 195 IVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFD 246
+VL CTHY L+ R P + + ++ ++A +A L RI D
Sbjct: 173 VVLGCTHYELVAERIRAAVQQPGRLPLVLHGSAGAVAAQA---LRRIGELPKPEAD 225
>gi|225549352|ref|ZP_03770325.1| glutamate racemase [Borrelia burgdorferi 94a]
gi|225370210|gb|EEG99650.1| glutamate racemase [Borrelia burgdorferi 94a]
Length = 305
Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 32/262 (12%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE + KK C
Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEYG--------ENYKKYALRC 204
Query: 184 FIEKEGKRTDV----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + + + L CTHY + + + +N + + + L+ +N
Sbjct: 205 LEALKFEVVNTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELV---VKNLIRSMNF 259
Query: 240 HQTR--------VFDDHALFLS 253
+ + F D +L+
Sbjct: 260 SEHKGNYYKNDFDFVDDEFYLT 281
>gi|312140967|ref|YP_004008303.1| glutamate racemase [Rhodococcus equi 103S]
gi|325675397|ref|ZP_08155081.1| glutamate racemase [Rhodococcus equi ATCC 33707]
gi|311890306|emb|CBH49624.1| putative glutamate racemase [Rhodococcus equi 103S]
gi|325553368|gb|EGD23046.1| glutamate racemase [Rhodococcus equi ATCC 33707]
Length = 255
Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 12/240 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G ++ + R++ +D+
Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLMLSLDPEGAPWGPRDERWVIDRVVGTARRAVDRG 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ CNTA + +R+ + +G VPAIK AAA S ++I +T AT
Sbjct: 63 A-EVVVLPCNTASVTALEHVRADLGDSIPVIGTVPAIKPAAAVCDS--VAIWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +NL+ + + + V+ LA + + + E + +
Sbjct: 120 DYQANLVKEFANGSSVVGVACHGLADAI-------DLGDVEAARAAIAAAAARTPDDVTG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ P V D+++++A + + + T + LSG
Sbjct: 173 VVLGCTHYPLVADEIAAHLPDGVALFDSAEAVAAQTLRRIDALG-RDTTGQGTVEVLLSG 231
>gi|216264433|ref|ZP_03436425.1| glutamate racemase [Borrelia burgdorferi 156a]
gi|223889211|ref|ZP_03623800.1| glutamate racemase [Borrelia burgdorferi 64b]
gi|225549776|ref|ZP_03770741.1| glutamate racemase [Borrelia burgdorferi 118a]
gi|215980906|gb|EEC21713.1| glutamate racemase [Borrelia burgdorferi 156a]
gi|223885460|gb|EEF56561.1| glutamate racemase [Borrelia burgdorferi 64b]
gi|225369736|gb|EEG99184.1| glutamate racemase [Borrelia burgdorferi 118a]
Length = 305
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 32/262 (12%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y + + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMENFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE KK C
Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEYGEN--------YKKYALRC 204
Query: 184 FIEKEGKRTDV----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + + + L CTHY + + + +N + + + L+ +N
Sbjct: 205 LEALKFEVVNTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELV---VKNLIRSMNF 259
Query: 240 HQTR--------VFDDHALFLS 253
+ + F D +L+
Sbjct: 260 SEHKGNYYKNDFDFVDDEFYLT 281
>gi|219684903|ref|ZP_03539845.1| glutamate racemase [Borrelia garinii PBr]
gi|219671848|gb|EED28903.1| glutamate racemase [Borrelia garinii PBr]
Length = 304
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 109/256 (42%), Gaps = 17/256 (6%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIVFDSGIGGLSYFKYIKNKIDRYQYVYVADNKNFPYGEKSSEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+++L + Y ++ACNT + ++L FP + L V I A +
Sbjct: 100 ILYLIEKLNKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSLISDLAL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE G K ++D ++ +E
Sbjct: 156 LLIATNTTLESKFVKDQVNMHD---DLIVKAAGELVNFVE---YGEKYRKDALRC-LEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E +++ L CTHY + + + +N + + + + +
Sbjct: 209 KFEVVNTDREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELVVQSLIRSINFPQCKNSY 266
Query: 244 VFDDH----ALFLSGK 255
+D +L+
Sbjct: 267 YKNDVDLVDEFYLTKN 282
>gi|237740830|ref|ZP_04571311.1| glutamate racemase [Fusobacterium sp. 4_1_13]
gi|229431127|gb|EEO41339.1| glutamate racemase [Fusobacterium sp. 4_1_13]
Length = 257
Score = 160 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 16/228 (7%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ +R P+ IY AD FPYG LK + +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIKKSVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K V+A N + D++++ +G P +K + I+
Sbjct: 61 LEKGA-SFIVLASNAPSITVLDKIKNKNK---VIGIYPPLKNVLNDRRKNT-LIIGAKVM 115
Query: 132 LRR----TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFI 185
+ Y + Y Q H+ +S L +E ++ + E I+ I+ C
Sbjct: 116 IESSELQDYIKKEVGDYCKQFHVEN-ASP-LIQLIESGDFINNTEETEKTIRNFIDNC-- 171
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E + + D I L+ TH P I F+++ P V D +D++ + +
Sbjct: 172 ENKFGKLDSITLSSTHLPWISSYFKKIIPE-VKLYDPADNLVKAIKNY 218
>gi|333022620|ref|ZP_08450684.1| putative glutamate racemase [Streptomyces sp. Tu6071]
gi|332742472|gb|EGJ72913.1| putative glutamate racemase [Streptomyces sp. Tu6071]
Length = 260
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 88/220 (40%), Gaps = 15/220 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAAL 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P VIACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT
Sbjct: 62 EPDALVIACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + ++ V+ LA V+ + V
Sbjct: 120 EYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADA-------AARTPAGVRV 172
Query: 195 IVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRA 230
+VL CTHY L+ L ++ ++A +A
Sbjct: 173 VVLGCTHYELVGARIAAALTRPGGAAPTLLGSAPAVAAQA 212
>gi|256846771|ref|ZP_05552226.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
gi|256717737|gb|EEU31295.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
Length = 257
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 16/228 (7%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ +R P+ IY AD FPYG LK + +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIKKSVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K V+A N + D++++ +G P +K + I+
Sbjct: 61 LEKGA-SFIVLASNAPSITVLDKIKNKNK---VIGIYPPLKNVLNDRRKNT-LIIGAKVM 115
Query: 132 LRR----TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFI 185
+ Y + Y Q H+ +S L +E + + E I+ I+ C
Sbjct: 116 IESSELQDYIKREVGDYCKQFHVEN-ASP-LIQLIESGNFINNTEETEKTIRNFIDNC-- 171
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E + + D I L+ TH P I F+++ P V D +D++ + +
Sbjct: 172 ENKFGKLDSITLSSTHLPWISSYFKKIIPE-VKLYDPADNLVKAIKNY 218
>gi|221217513|ref|ZP_03588984.1| glutamate racemase [Borrelia burgdorferi 72a]
gi|221192791|gb|EEE19007.1| glutamate racemase [Borrelia burgdorferi 72a]
Length = 305
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 24/258 (9%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE G K+D ++ +E
Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E +++ L CTHY + + + +N + + + L+ +N + +
Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHK 263
Query: 244 --------VFDDHALFLS 253
F D +L+
Sbjct: 264 GNYYKNDFDFVDDEFYLT 281
>gi|226320707|ref|ZP_03796265.1| glutamate racemase [Borrelia burgdorferi 29805]
gi|226233923|gb|EEH32646.1| glutamate racemase [Borrelia burgdorferi 29805]
Length = 305
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 24/258 (9%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE G K+D ++ +E
Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E +++ L CTHY + + + +N + + + L+ +N + +
Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHK 263
Query: 244 --------VFDDHALFLS 253
F D +L+
Sbjct: 264 GNYYKNDFDFVDDEFYLT 281
>gi|51598363|ref|YP_072551.1| glutamate racemase [Borrelia garinii PBi]
gi|51572934|gb|AAU06959.1| glutamate racemase [Borrelia garinii PBi]
Length = 260
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I++FDSGIGGL + ++ M Y ++YVAD+ FPYG L + +++L
Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKNKMDGYQYVYVADNKNFPYGEKSSEYLLEAVLYLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y ++ACNT + ++L FP + L V +I + +++T
Sbjct: 61 EKLNKIYNISALILACNTISVSVYNKLNFIFPVVYTLPEVSSISDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE G K ++D I+ +E E
Sbjct: 117 NTTLESKFVKDQVNMHN---DLIIKAAGELVNFVE---YGEKYRKDAIRC-LEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+++ L CTHY + + PV
Sbjct: 170 NTGREIVFLGCTHYLHLKAMIEDFLKIPV 198
>gi|218249889|ref|YP_002374628.1| glutamate racemase [Borrelia burgdorferi ZS7]
gi|226321989|ref|ZP_03797514.1| glutamate racemase [Borrelia burgdorferi Bol26]
gi|218165077|gb|ACK75138.1| glutamate racemase [Borrelia burgdorferi ZS7]
gi|226232579|gb|EEH31333.1| glutamate racemase [Borrelia burgdorferi Bol26]
Length = 305
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 106/262 (40%), Gaps = 32/262 (12%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE KK C
Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEYGEN--------YKKYALRC 204
Query: 184 FIEKEGKRTDV----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + + + L CTHY + + + +N + + + L+ +N
Sbjct: 205 LEALKFEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNF 259
Query: 240 HQTR--------VFDDHALFLS 253
+ + F D +L+
Sbjct: 260 SEHKGNYYKNDFDFVDDEFYLT 281
>gi|318059525|ref|ZP_07978248.1| glutamate racemase [Streptomyces sp. SA3_actG]
Length = 260
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 15/220 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAAL 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P V+ACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT
Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + ++ V+ LA V+ + V
Sbjct: 120 EYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADA-------AARTPAGVRV 172
Query: 195 IVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRA 230
+VL CTHY L+ L ++ ++A +A
Sbjct: 173 VVLGCTHYELVGARIAAALTRPGGAAPTLLGSAPAVAAQA 212
>gi|225552350|ref|ZP_03773290.1| glutamate racemase [Borrelia sp. SV1]
gi|225371348|gb|EEH00778.1| glutamate racemase [Borrelia sp. SV1]
Length = 261
Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + E ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGECQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE G K+D ++ +E E
Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----- 243
+++ L CTHY + + + +N + + + L+ +N + +
Sbjct: 170 NTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHKGNYYK 224
Query: 244 ---VFDDHALFLS 253
F D +L+
Sbjct: 225 NDFDFVDDEFYLT 237
>gi|224532535|ref|ZP_03673159.1| glutamate racemase [Borrelia burgdorferi WI91-23]
gi|224512525|gb|EEF82902.1| glutamate racemase [Borrelia burgdorferi WI91-23]
Length = 305
Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 24/258 (9%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y + + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMENFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE G K+D ++ +E
Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E +++ L CTHY + + + +N + + + L+ +N + +
Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHK 263
Query: 244 --------VFDDHALFLS 253
F D +L+
Sbjct: 264 GNYYKNDFDFVDDEFYLT 281
>gi|224532254|ref|ZP_03672886.1| glutamate racemase [Borrelia valaisiana VS116]
gi|224511719|gb|EEF82125.1| glutamate racemase [Borrelia valaisiana VS116]
Length = 260
Score = 159 bits (404), Expect = 4e-37, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 17/251 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKSKIEGYQYVYVADNKNFPYGEKSSDYLLQSVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y + V+ACNT + ++L FP + L V ++ + A + +++T
Sbjct: 61 EKLKKIYNIIALVLACNTISVSVYNKLNFVFPVIYTLPEVSSVSELAL----KKVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE G K ++D ++ +E E
Sbjct: 117 NTTLESKFVKDQVNIHD---DLIVKAAGELVNFVE---YGEKFRKDALRC-LEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRV 244
+++ L CTHY + + + +N + + + + + N H+ V
Sbjct: 170 HTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELVVQSLIRSINFFECKGNYHKNDV 227
Query: 245 FDDHALFLSGK 255
+L+
Sbjct: 228 NFVDEFYLTKN 238
>gi|195941838|ref|ZP_03087220.1| glutamate racemase (murI) [Borrelia burgdorferi 80a]
Length = 261
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 24/253 (9%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE G K+D ++ +E E
Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----- 243
+++ L CTHY + + + +N + + + L+ +N + +
Sbjct: 170 NTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHKGNYYK 224
Query: 244 ---VFDDHALFLS 253
F D +L+
Sbjct: 225 NDFDFVDDEFYLT 237
>gi|312147962|gb|ADQ30621.1| glutamate racemase [Borrelia burgdorferi JD1]
Length = 261
Score = 158 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 32/257 (12%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE + KK C +
Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEYG--------ENYKKYALRCLEALK 165
Query: 189 GKRTDV----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR- 243
+ + + L CTHY + + + +N + + + L+ +N + +
Sbjct: 166 FEVVNTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHKG 220
Query: 244 -------VFDDHALFLS 253
F D +L+
Sbjct: 221 NYYKNDFDFVDDEFYLT 237
>gi|302523482|ref|ZP_07275824.1| glutamate racemase [Streptomyces sp. SPB78]
gi|302432377|gb|EFL04193.1| glutamate racemase [Streptomyces sp. SPB78]
Length = 260
Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 89/220 (40%), Gaps = 15/220 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAAL 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P V+ACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT
Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + ++ V+ LA V+ + V
Sbjct: 120 EYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADA-------AARTPAGVRV 172
Query: 195 IVLACTHYPLIVHVFRQLS--PWPV--DWLDNSDSIARRA 230
+VL CTHY L+ P L ++ ++A +A
Sbjct: 173 VVLGCTHYELVGARIAAALTRPGRAAPTLLGSAPAVAAQA 212
>gi|219685353|ref|ZP_03540172.1| glutamate racemase [Borrelia garinii Far04]
gi|219673126|gb|EED30146.1| glutamate racemase [Borrelia garinii Far04]
Length = 260
Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + +++L
Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKNKIDGYQYVYVADNKNFPYGEKSSEYLLEAILYLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y ++ACNT + ++L FP + L V I A + +++T
Sbjct: 61 EKLNKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSLISDLAL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE G K ++D ++ +E E
Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEH---GEKYRKDALRC-LEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+++ L CTHY + + PV
Sbjct: 170 NTDREIVFLGCTHYLHLKSMIEDFLKIPV 198
>gi|224534028|ref|ZP_03674612.1| glutamate racemase [Borrelia burgdorferi CA-11.2a]
gi|224512864|gb|EEF83231.1| glutamate racemase [Borrelia burgdorferi CA-11.2a]
Length = 305
Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 24/258 (9%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPKYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE G K+D ++ +E
Sbjct: 156 LLIATNTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDALRC-LEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E +++ L CTHY + + + +N + + + L+ +N + +
Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHK 263
Query: 244 --------VFDDHALFLS 253
F D +L+
Sbjct: 264 GNYYKNDFDFVDDEFYLT 281
>gi|224534952|ref|ZP_03675521.1| glutamate racemase [Borrelia spielmanii A14S]
gi|224513892|gb|EEF84217.1| glutamate racemase [Borrelia spielmanii A14S]
Length = 260
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFEYIKSKLGGCQYVYVADNKNFPYGKKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y ++ACNT + ++L FP + L V + A + +++T
Sbjct: 61 ERLKKIYNVSALILACNTISVSVYNKLNFVFPVVYTLPEVSLVSDLAL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE G K K+D ++ +E E
Sbjct: 117 NTTLESKFVKDQVNMHN---DLIVKAAGELVNFVE---YGKKYKKDALRC-LEALKSEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+++ L CTHY + + PV
Sbjct: 170 NTGREIVFLGCTHYLHLKSMIEDFLKIPV 198
>gi|29827966|ref|NP_822600.1| glutamate racemase [Streptomyces avermitilis MA-4680]
gi|29605067|dbj|BAC69135.1| putative glutamate racemase [Streptomyces avermitilis MA-4680]
Length = 261
Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats.
Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 17/255 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + +R + + +
Sbjct: 3 IALLDSGIGLLAAAAAVRRLRPDADLVLSSDPASVPWGPRTPQDVTERSLAVAEAA-AAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P + ACNT LR+ F P + +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIAACNTMSVHALPALRARFEPGLPVIGTVPAIKPAAAS--GGPVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE E+ V
Sbjct: 120 PYQRGLIREFADGVAVTEVPCPGLADAVEHANEAAIDAAIA-------AAAERTPDDVRV 172
Query: 195 IVLACTHYPLIVHVFRQL-----SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R P V ++ ++A +A + + + +
Sbjct: 173 VVLGCTHYELVAERIRAAVQKPGLPPLV-LHGSAGAVAAQALRRIGELPAPEAPMGASLT 231
Query: 250 LFLSGKPDIAMRRLM 264
+ L G+ + +
Sbjct: 232 VLLGGREETLPAPAL 246
>gi|325138574|gb|EGC61136.1| glutamate racemase 1 [Neisseria meningitidis ES14902]
Length = 191
Score = 157 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 7/170 (4%)
Query: 101 SMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA 159
+M L + A K A A T++ I I++T T+ + IH + ++ +L
Sbjct: 15 NMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLV 74
Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
VEE ++ + + ++ + D +VL CTH+PL+ + + + V
Sbjct: 75 PLVEEGWLEHEVTRLTVCEYLKPLLAD----GIDTLVLGCTHFPLLKPLIGREA-HNVAL 129
Query: 220 LDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
+D++ + A +L + T D+ ++S P + G
Sbjct: 130 VDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 179
>gi|262066069|ref|ZP_06025681.1| putative glutamate racemase [Fusobacterium periodonticum ATCC
33693]
gi|291380163|gb|EFE87681.1| putative glutamate racemase [Fusobacterium periodonticum ATCC
33693]
Length = 257
Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I +FD+G+G +++ ++ P+ +Y AD FPYG L+ + +
Sbjct: 1 MNKAIAVFDAGLGSYAIVEAIKKAYPQQDILYFADRKSFPYGTKTTEELRDIIENSIDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K V+A N + D++++ +G P +K + I+
Sbjct: 61 LEKGA-AFIVLASNAPSITVLDKIKNKD---NVIGIYPPLKDVIKDKKKNT-LIIGAKVM 115
Query: 132 LRR----TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFI 185
+ Y + + Q H+ +S L +E ++ ++ E IK I+ C
Sbjct: 116 IDSPELQEYIKKEVGDFYKQFHVEN-ASP-LIQLIESGDFINNVEETEKIIKNFIDNC-- 171
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
E + + D I L+ TH P + F+++ P D SD + + +
Sbjct: 172 ENKFGKLDSITLSSTHLPWLSSYFQKIIPE-AKLYDPSDDLVKAIKN 217
>gi|237739926|ref|ZP_04570407.1| asp/Glu racemase [Fusobacterium sp. 2_1_31]
gi|229423534|gb|EEO38581.1| asp/Glu racemase [Fusobacterium sp. 2_1_31]
Length = 263
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 16/229 (6%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+K+ +I +FD+G+G +++ ++ P+ IY AD FPYG LK +
Sbjct: 5 EKMNKAIAVFDAGLGSYAIVEAIKKAYPKQDIIYFADRKSFPYGTKTTDELKTIIEDSVD 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L K V+A N + D++++ +G P +K + I+
Sbjct: 65 FLLKKGA-SFIVLASNAPSITVLDKIKNKD---NVIGIYPPLKNVINDKKKNT-LIIGAK 119
Query: 130 ATLRR----TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGC 183
+ Y + + Q H+ +S L +E ++ I+ E+ IK I+ C
Sbjct: 120 VMIDSFELQEYIKKEVGDFQKQFHVEN-ASP-LIQLIESGDFINNIEKTENTIKNFIKTC 177
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
E++ + D I L+ TH P + F+++ P D +DS+ + +
Sbjct: 178 --EEKYGKLDSITLSSTHLPWLSSYFQKIIPE-AKLYDPADSLVKAIKN 223
>gi|294782987|ref|ZP_06748311.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
gi|294479865|gb|EFG27642.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
Length = 257
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 94/226 (41%), Gaps = 12/226 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I +FD+G+G +++ ++ P+ IY AD FPYG LK + +
Sbjct: 1 MNKAIAVFDAGLGSYAIVEAIKKTYPQQDIIYFADRKSFPYGTKTTDELKTIIEDSVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K V+A N + D++++ +G P +K + I+
Sbjct: 61 LKKGA-SFIVLASNAPSITVLDKIKNKD---NVIGIYPPLKNVIKDKKKNT-LIIGAKVM 115
Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEK 187
+ I V HL ++ L +E ++ I+ E+ IK I+ C E+
Sbjct: 116 IDSPELQEYIKKEVGDFYKQFHLENASPLIQLIESGDFINNIEKTENTIKNFIKTC--EE 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + D I L+ TH P + F+++ P D +DS+ + +
Sbjct: 174 KYGKLDSITLSSTHLPWLSSYFQKIIPE-AKLYDPADSLVKAIKNY 218
>gi|126643405|ref|YP_001086389.1| glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 188
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
+ + +R+ ++ + PA+K A A T S I++L+T T++ +LI +Y
Sbjct: 2 TAVAVETIRAQI-NVPLIAIEPAVKPAVAMTLSKHIAVLATATTVKGKNLKSLIETYAQD 60
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ LV + LA ++E E+K ++ ++ D I+L CTHYP +
Sbjct: 61 IKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQKVDTIILGCTHYPFVSD 116
Query: 208 VFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDDHALFLSGKP 256
+++ + ++ S+++ A+ R L + ++ +H ++ S P
Sbjct: 117 TIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHIIWTSSDP 166
>gi|312149583|gb|ADQ29654.1| glutamate racemase [Borrelia burgdorferi N40]
Length = 261
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE G K+D + +E E
Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVE---YGENYKKDAFRC-LEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----- 243
+++ L CTHY + + + +N + + + L+ +N + +
Sbjct: 170 NTGREIVFLGCTHYLHLKTLIEDFL--KIPVYENRELV---VKNLIRSMNFSEHKGNYYK 224
Query: 244 ---VFDDHALFLS 253
F D +L+
Sbjct: 225 NDFDFVDDEFYLT 237
>gi|15594446|ref|NP_212234.1| glutamate racemase (murI) [Borrelia burgdorferi B31]
gi|11386901|sp|O51127|MURI_BORBU RecName: Full=Glutamate racemase
gi|2687975|gb|AAC66479.1| glutamate racemase (murI) [Borrelia burgdorferi B31]
Length = 261
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 32/257 (12%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE + KK C +
Sbjct: 117 NTTLESKFVKDQVNIHN---DLIVKAAGELVNFVEYG--------ENYKKYALRCLEALK 165
Query: 189 GKRTDV----IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR- 243
+ + + L CTHY + + + +N + + + L+ +N + +
Sbjct: 166 FEVVNTGREIVFLGCTHYLHLKVMIEDFL--KIPVYENRELV---VKNLIRSMNFSEHKG 220
Query: 244 -------VFDDHALFLS 253
F D +L+
Sbjct: 221 NYYKNDFDFVDDEFYLT 237
>gi|325142727|gb|EGC65104.1| glutamate racemase 1 [Neisseria meningitidis 961-5945]
Length = 185
Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 7/170 (4%)
Query: 101 SMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA 159
+M L + A K A A T++ I I++T T+ + IH + ++ +L
Sbjct: 9 NMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLV 68
Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
VEE ++ + + ++ + D +VL CTH+PL+ + + + V
Sbjct: 69 PLVEEGWLEHEVTRLTVCEYLKPLLAD----GIDTLVLGCTHFPLLKPLIGREA-HNVAL 123
Query: 220 LDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
+D++ + A +L + T D+ ++S P + G
Sbjct: 124 VDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 173
>gi|294785961|ref|ZP_06751248.1| glutamate racemase [Fusobacterium sp. 3_1_27]
gi|294486298|gb|EFG33661.1| glutamate racemase [Fusobacterium sp. 3_1_27]
Length = 256
Score = 155 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 13/224 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ +R P+ IY AD FPYG LK + + +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIEKSVNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K V+A N + D++++ +G P ++ + I+
Sbjct: 61 LEKGA-SFIVLASNAPSITVLDKIKNN----KVIGIYPPLRDVINDKKKNT-LIIGAKVM 114
Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEY--ACGIKIKEDEIKKEIEGCFIEK 187
+ + N I V H+ ++ L +E I+ E IK I+ C E
Sbjct: 115 IESSELQNYIKREVGDSYKQFHVENASSLIQLIESGTFINNIEETEKTIKNFIDNC--EN 172
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ + D I L+ TH P + F ++ P D +DS+ + +
Sbjct: 173 KFGKLDSITLSSTHLPWLSSYFEKIIP-QTKLYDPADSLVKAIK 215
>gi|227873305|ref|ZP_03991570.1| possible glutamate racemase [Oribacterium sinus F0268]
gi|227840872|gb|EEJ51237.1| possible glutamate racemase [Oribacterium sinus F0268]
Length = 121
Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+I IFDSG+GGL VL+K++ +P FI+ D PYG + ++ + +
Sbjct: 2 DKDKAIGIFDSGLGGLSVLRKLKQELPGEDFIFYGDQKHAPYGEKSEEEVRSLSLSAYRF 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+ +K +VIACNTA + LR FP +G PA+K A
Sbjct: 62 LQEKG-VKATVIACNTATSAAAPYLRELFPEDIIIGMEPAVKPAVEA 107
>gi|216263947|ref|ZP_03435941.1| glutamate racemase [Borrelia afzelii ACA-1]
gi|215979991|gb|EEC20813.1| glutamate racemase [Borrelia afzelii ACA-1]
Length = 261
Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMR-FLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKSKVEGGYQYVYVADNKNFPYGEKSSEYLLEAVLFL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ Y ++ACNT + ++L FP + L V +I A + +++
Sbjct: 61 IEKLKKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSSISDLAL----KRVLLIA 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TL + + ++ + + + ++ L + VE G K K+D ++ +E E
Sbjct: 117 TNTTLESKFVKDQVNMHE---DLIVKAAGELVNFVE---YGKKYKKDALRC-LEALKSEV 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+++ L CTHY + + PV
Sbjct: 170 VNTGREIVFLGCTHYLHLKTMIEDFLKIPV 199
>gi|254385389|ref|ZP_05000717.1| glutamate racemase [Streptomyces sp. Mg1]
gi|194344262|gb|EDX25228.1| glutamate racemase [Streptomyces sp. Mg1]
Length = 263
Score = 152 bits (386), Expect = 4e-35, Method: Composition-based stats.
Identities = 66/249 (26%), Positives = 102/249 (40%), Gaps = 20/249 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L MR L P+ + +D G P+G L +R + + +
Sbjct: 3 IALMDSGIGLLAAAAAMRRLRPDADLVISSDPDGMPWGPRTPADLTERAVAVARAA-AAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIVACNTASVHSLPNLRAELEPAIPVIGTVPAIKPAAAA--GGRVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + + V LA VE ++ + DV
Sbjct: 120 PYQRGLIRDFAAGVRVTEVPCPGLADAVEHGNEEEVVRAVAAAAALTP---------PDV 170
Query: 195 --IVLACTHYPLIVHVFRQLS-----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+VL CTHY L+ V R + +++ +A +A +
Sbjct: 171 TDVVLGCTHYELVDEVIRAALAERTGGAEPVFHGSAEPVAVQALRRIGARPEPGLPRTGG 230
Query: 248 HALFLSGKP 256
+ LSG+P
Sbjct: 231 LTVLLSGRP 239
>gi|237744000|ref|ZP_04574481.1| glutamate racemase [Fusobacterium sp. 7_1]
gi|229433031|gb|EEO43243.1| glutamate racemase [Fusobacterium sp. 7_1]
Length = 257
Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 16/228 (7%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ ++ P+ IY AD FPYG LK + D
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTVEQLKTIIKNSI-DF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+A N + D++++ +G P +K I+
Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKNNDK---IIGIYPPLKDVIKDKMKNT-LIIGAKVM 115
Query: 132 LRRT----YTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFI 185
+ Y + ++ Q H+ +S L +E A I E I+ I C
Sbjct: 116 IESPELQDYIKREVGNFYKQFHVEN-ASP-LIQLIENGAFINNIMETEKTIRNFINDC-- 171
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E + + D I L+ TH P + F+++ P V D +D++ + +
Sbjct: 172 ENKFGKLDSITLSSTHLPWLFSYFKKIIPE-VKLYDPADNLVKAIKNY 218
>gi|239833140|ref|ZP_04681469.1| Glutamate racemase [Ochrobactrum intermedium LMG 3301]
gi|239825407|gb|EEQ96975.1| Glutamate racemase [Ochrobactrum intermedium LMG 3301]
Length = 278
Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 4/255 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+K + P + L + + +FD+GIG +++ +R P+ IY AD FPYG L
Sbjct: 2 LKHETAPAVENLHDPVAVFDAGIGSYALVELIRRSQPQRDIIYFADRASFPYGAKSRDQL 61
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ L V+A N ++ D L+S F ++ G P ++ A A ++S
Sbjct: 62 LSIMRHTIRY-LTGLGAQTIVLASNAPSVMVLDALKSEF-AVPVYGVAPPVRAAFAASRS 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCH-IHLVSSMILASRVEEYACGIKIKEDEIKKE 179
G ++++ + + + + + + + L+++ + VE A + E K
Sbjct: 120 GKVAVMGVRSMIESEELARFVRAEADRPEDVALINASAMVELVENGAFLRQPGETGQKVA 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
I R D + L+ TH P + F P +LD +D + L
Sbjct: 180 AFCDEIAASHPRIDTLTLSSTHLPWLRSFFETARPDW-RFLDPADDVIAALPQPLGGSGR 238
Query: 240 HQTRVFDDHALFLSG 254
V + A +SG
Sbjct: 239 TVALVTESDAYPVSG 253
>gi|256027385|ref|ZP_05441219.1| Asp/Glu racemase [Fusobacterium sp. D11]
gi|289765349|ref|ZP_06524727.1| glutamate racemase [Fusobacterium sp. D11]
gi|289716904|gb|EFD80916.1| glutamate racemase [Fusobacterium sp. D11]
Length = 257
Score = 151 bits (383), Expect = 9e-35, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 89/226 (39%), Gaps = 12/226 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ ++ P+ IY AD FPYG LK + D
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTIEQLKTIIKNSI-DF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+A N + D++++ +G P +K I+
Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKNNDK---VIGIYPPLKDVIKDKMKNT-LIIGAKVM 115
Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEK 187
+ + I V H+ ++ L +E A I E I+ I C E
Sbjct: 116 IESPELQDYIKREVGNSYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--EN 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + D I L+ TH P + F+++ P V D +D++ + +
Sbjct: 174 KFGKLDSITLSSTHLPWLFSYFKKIIPE-VKLYDPADNLVKAIKNY 218
>gi|260497932|ref|ZP_05816049.1| glutamate racemase [Fusobacterium sp. 3_1_33]
gi|260196493|gb|EEW94023.1| glutamate racemase [Fusobacterium sp. 3_1_33]
Length = 257
Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 89/226 (39%), Gaps = 12/226 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ ++ P+ IY AD FPYG LK + D
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTVEQLKTIIKNSI-DF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+A N + D++++ +G P +K I+
Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKNNDK---VIGIYPPLKDVIKDKMKNT-LIIGAKVM 115
Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEK 187
+ + I V H+ ++ L +E A I E I+ I C E
Sbjct: 116 IESPELQDYIKREVGNSYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--EN 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + D I L+ TH P + F+++ P V D +D++ + +
Sbjct: 174 KFGKLDSITLSSTHLPWLFSYFKKIIPE-VKLYDPADNLVKAIKNY 218
>gi|255030221|ref|ZP_05302172.1| glutamate racemase [Listeria monocytogenes LO28]
Length = 96
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K + + +
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108
+D+ + VIACNTA ++R + +G +
Sbjct: 61 VDRG-IKMLVIACNTATAAALYDIREKL-DIPVIGVI 95
>gi|111114922|ref|YP_709540.1| glutamate racemase [Borrelia afzelii PKo]
gi|110890196|gb|ABH01364.1| glutamate racemase [Borrelia afzelii PKo]
Length = 261
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMR-FLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++ L
Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKSKVGGGYQYVYVADNKNFPYGEKSSEYLLEAVLVL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ Y ++ACNT + ++L FP + L V +I A + +++
Sbjct: 61 IEKLKKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSSISDLAL----KRVLLIA 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TL + + ++ + + + ++ L + VE G K K+D ++ +E E
Sbjct: 117 TNTTLESKFVKDQVNMHE---DLIVKAAGELVNFVE---YGKKYKKDALRC-LEALKSEV 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+++ L CTHY + + PV
Sbjct: 170 VNTGREIVFLGCTHYLHLKTMIEDFLKIPV 199
>gi|320012326|gb|ADW07176.1| Glutamate racemase [Streptomyces flavogriseus ATCC 33331]
Length = 279
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 96/246 (39%), Gaps = 24/246 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + +R + + +
Sbjct: 19 IALMDSGIGLLAAAAAVRRLRPDADLVLSSDPGSMPWGPRTPEDVTRRALAVAQAA-AAH 77
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ P + +G VPAIK AAA G +I +TPAT
Sbjct: 78 RPDALIVACNTASVHALPTLRAELEPGLPVIGTVPAIKPAAAG--GGPFAIWATPATTGS 135
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI+ + + V LA VE + + DV
Sbjct: 136 PYQRGLINDFARAVDVTEVPCPGLADAVEHADEQGIDRAVAAAAALTP---------PDV 186
Query: 195 --IVLACTHYPLIVHVFRQLS----PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFD 246
+VL CTHY L+ R P + ++D++A +A L R+ +
Sbjct: 187 TDVVLGCTHYELVAERIRAAVERDRPGRAPLVLHGSADAVAAQA---LRRVGAAPAPSAE 243
Query: 247 DHALFL 252
Sbjct: 244 PTGALT 249
>gi|182440359|ref|YP_001828078.1| putative glutamate racemase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178468875|dbj|BAG23395.1| putative glutamate racemase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 261
Score = 150 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 15/246 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + + + +
Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDITALALDVARAA-AAH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P ++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 62 RPDALIVACNTASVHALPALRAELEPALPVIGTVPAIKPAAAG--GGSVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA +E + + +
Sbjct: 120 PYQRGLIGDFGGTAEVTEVPCPGLADALEHGDEAGIDRAVAAAAALTP-------RDVRA 172
Query: 195 IVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+VL CTHY L+ R P+ ++ ++A +A + +
Sbjct: 173 VVLGCTHYELVAARIRDAVQRPDGPPLALHGSAGAVAAQALRRIGADPAPGAEPSAGLTV 232
Query: 251 FLSGKP 256
+G+P
Sbjct: 233 LQAGRP 238
>gi|297562279|ref|YP_003681253.1| glutamate racemase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296846727|gb|ADH68747.1| Glutamate racemase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 261
Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 75/208 (36%), Gaps = 13/208 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R P+ D P+G + R + +
Sbjct: 3 IALVDSGIGMLSTAAALRVARPDADLFLSMDPDHMPWGPRTPDEIVARALAGARAAQEAA 62
Query: 76 QP---VLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
V+ CNTA ELR+ F P + +G VPAIK AAA + ST AT
Sbjct: 63 GDAALDAVVVPCNTASVHGLAELRAEFEPDVPVIGTVPAIKPAAAAGGPIA--VWSTAAT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R Y L+ ++ + V+ LA VE + + + E
Sbjct: 121 TRSGYQRQLVETFARGVEVTAVACAGLAEAVES-------ADPRLIDDAVAYAAELTPGD 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VL CTHY L+ +
Sbjct: 174 VHGVVLGCTHYDLVGAQISAALGGRAEL 201
>gi|54027044|ref|YP_121286.1| putative glutamate racemase [Nocardia farcinica IFM 10152]
gi|54018552|dbj|BAD59922.1| putative glutamate racemase [Nocardia farcinica IFM 10152]
Length = 253
Score = 149 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 12/244 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G + +R++ + I
Sbjct: 3 VALIDSGLGLLPTAAWLRKLRPDVDLLLQLDPDGAPWGPKPEQWTIERVV-AAARISIAA 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ CNTA +++R+ P + +G VPAIK AAA + + +T AT
Sbjct: 62 GAEVIVLPCNTASVTALEQVRAEVGPEVPVIGTVPAIKPAAAACRRVA--VWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y + LI + + V+ LA ++ + T+
Sbjct: 120 RYQAELIEKFGGDAEVVGVACHGLADAIDRGDLTAATDAIARA-------AAQTPAGTEG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+V P V D++ ++A + + + T + SG
Sbjct: 173 VVLGCTHYPLVVDAIVAALPAGVRLFDSAQAVAAQTIRKMEGLG-RPTTGEGVVRVLNSG 231
Query: 255 KPDI 258
+P
Sbjct: 232 RPGT 235
>gi|153820612|ref|ZP_01973279.1| glutamate racemase [Vibrio cholerae NCTC 8457]
gi|126508845|gb|EAZ71439.1| glutamate racemase [Vibrio cholerae NCTC 8457]
Length = 176
Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
A+ S I +++TPAT++R YT LI + + ++ L+ S L + EE G + +
Sbjct: 17 ASLIASKAIGLIATPATVKRQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLE 76
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
E+ ++ DV VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 77 ELASILQPL-----KNTIDVAVLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELL 131
Query: 235 PRINTHQTRVFDDHALFLSGKP--DIAMRRLMQGFGLK 270
H ++ S P + A+ ++ G
Sbjct: 132 GI--EQAVGAKQKHRIYASAPPWEESALNIKLEQLGFN 167
>gi|298254110|ref|ZP_06977696.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19A]
Length = 88
Score = 147 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I DSG+GGL V++++ +P +Y+ D PYG +++
Sbjct: 1 MDNRP--------IGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIRE 52
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF 99
L + +L K + VIACNTA ++ +E+++
Sbjct: 53 YTWQLVNFLLTK-DVKMIVIACNTATAVVWEEIKAQL 88
>gi|239939360|ref|ZP_04691297.1| putative glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|291442794|ref|ZP_06582184.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|291345741|gb|EFE72645.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
Length = 261
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 11/199 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G L + + +
Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDLTALALDVARAAAAQR 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
P +IACNTA +R+ P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 63 -PDALIIACNTASVHALPAIRAELEPALPVIGTVPAIKPAAAG--GGSVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE E I + +
Sbjct: 120 PYQRGLIAEFGGSAEVTEVPCPGLADAVEHG------DEAGIDRTVAAA-AALTPPDVRA 172
Query: 195 IVLACTHYPLIVHVFRQLS 213
+VL CTHY L+ R
Sbjct: 173 VVLGCTHYELVATRIRDAV 191
>gi|239985839|ref|ZP_04706503.1| putative glutamate racemase [Streptomyces roseosporus NRRL 11379]
Length = 261
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 11/199 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G L + + +
Sbjct: 3 IALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDLTALALDVARAAAAQR 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
P +IACNTA +R+ P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 63 -PDALIIACNTASVHALPAIRAELEPALPVIGTVPAIKPAAAG--GGSVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + V LA VE E I + +
Sbjct: 120 PYQRGLIAEFGGSAEVTEVPCPGLADAVEHG------DEAGIDRTVAAA-AALTPPDVRA 172
Query: 195 IVLACTHYPLIVHVFRQLS 213
+VL CTHY L+ R
Sbjct: 173 VVLGCTHYELVATRIRDAV 191
>gi|167044446|gb|ABZ09122.1| putative Asp/Glu/hydantoin racemase [uncultured marine
crenarchaeote HF4000_APKG6D9]
Length = 253
Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 16/250 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+G L ++++++ + IY AD +PYG L + + ++
Sbjct: 4 IAVFDSGLGSLSIIKEIQKITKSE-IIYFADQKNYPYGRKSQAQLSIIIQKTVKLLEKEF 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P + V+A NT L+ D + + P +K A T++ I IL+T + +
Sbjct: 63 APEIIVVASNTPS-LMLD-----LSTQKIVDVKPPLKIAKKITKTKQIGILATKSAINSK 116
Query: 136 YTSNLIHS--YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
S I + I ++ L VE + ++ I+ + D
Sbjct: 117 GLSEYIRKNNFSKSFKIFKINGSNLIDLVESGKF--LTDKKYCREIIKKDLEILSQQSID 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
I L+ TH + + ++ P + ++D+ +A+ + L N R + + S
Sbjct: 175 TITLSSTHLIFLKSLLKKEFP-KIKFIDSGKIVAQ--KIFLKIKNKESKR--NSLKILTS 229
Query: 254 GKPDIAMRRL 263
G + +L
Sbjct: 230 GNVNDFQIKL 239
>gi|326781027|ref|ZP_08240292.1| Glutamate racemase [Streptomyces cf. griseus XylebKG-1]
gi|326661360|gb|EGE46206.1| Glutamate racemase [Streptomyces cf. griseus XylebKG-1]
Length = 256
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 15/243 (6%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L +R L P+ + +D P+G + + + ++P
Sbjct: 1 MDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDITALALDVARAA-AAHRPD 59
Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++ACNTA LR+ P++ +G VPAIK AAA G ++I +TPAT Y
Sbjct: 60 ALIVACNTASVHALPALRAELEPALPVIGTVPAIKPAAAG--GGSVAIWATPATTGSPYQ 117
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + + V LA +E + + + +VL
Sbjct: 118 RGLIGDFGGTADVTEVPCPGLADALEHGDEAGIDRAVAAAAALTP-------RDVRAVVL 170
Query: 198 ACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
CTHY L+ R P+ ++ ++A +A + + + +
Sbjct: 171 GCTHYELVAARIRDAVQRPDGPPLALHGSAGAVAAQALRRIGAVPAPGAEPSAGLTVLQA 230
Query: 254 GKP 256
G+P
Sbjct: 231 GRP 233
>gi|282863002|ref|ZP_06272062.1| Glutamate racemase [Streptomyces sp. ACTE]
gi|282561984|gb|EFB67526.1| Glutamate racemase [Streptomyces sp. ACTE]
Length = 256
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 96/243 (39%), Gaps = 15/243 (6%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L +R L P+ + +D P+G + +R + + ++P
Sbjct: 1 MDSGIGLLAAAAAVRRLRPDADLVLSSDPASMPWGPLTPEGVTERALAVARAA-AAHRPD 59
Query: 79 LSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ ++ACNTA LR P++ +G VPAIK AAA G ++I +TPAT Y
Sbjct: 60 VLIVACNTASVHALPTLRDELEPALPVVGTVPAIKPAAAG--GGPVAIWATPATTGSPYQ 117
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + S + V LA VE + + T +VL
Sbjct: 118 RGLIEDFASHVDVTEVPCPGLADAVEHADEAAIDRAVAAAAALTP-------PGTAGVVL 170
Query: 198 ACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
CTHY L+ R + ++D++A +A + + + L
Sbjct: 171 GCTHYELVAERIRAAVRHPGHPDATFHGSADAVAAQALRRVGAVPAPSAEPSGTLTVLLG 230
Query: 254 GKP 256
G P
Sbjct: 231 GHP 233
>gi|329766264|ref|ZP_08257822.1| glutamate racemase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137323|gb|EGG41601.1| glutamate racemase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 253
Score = 145 bits (368), Expect = 5e-33, Method: Composition-based stats.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 19/253 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+G L V+++++ + + IY AD FPYG +KK + + I + +
Sbjct: 4 IAIFDSGLGSLSVIKQIQKQI-KCDIIYFADSKNFPYGKKSIKEIKKITLQTITTIQNLF 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L ++ NT L T S + +P + +A T+S I+IL+T + ++
Sbjct: 63 KPDLIIVGSNTLS------LTLTSHSKNIIIVLPPLSEAQKITKSKSIAILATESIVKSK 116
Query: 136 YTSNLIHSY-VSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I+ + ++ I +++ L VE K + IKK ++ I
Sbjct: 117 LLDSYINLFQINNTKIIKINASPLVELVESGKFYSDQKYCKVIIKKTLDYKLI---RNNV 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV+ L+ TH P ++ +++ P V +LD S + + +F
Sbjct: 174 DVVTLSSTHLPFLLKFLKEIFP-HVTFLDPSI-----LLAKKLKKKYSNDNKRNSLQIFT 227
Query: 253 SGKPDIAMRRLMQ 265
SG +L
Sbjct: 228 SGNIKSLKIKLKH 240
>gi|311895050|dbj|BAJ27458.1| putative glutamate racemase [Kitasatospora setae KM-6054]
Length = 252
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 81/223 (36%), Gaps = 18/223 (8%)
Query: 37 PEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELR 96
P+ + D G P+G + + ++P V+ACNTA LR
Sbjct: 24 PDADLVVSCDPDGMPWGPRTPEDITAHALACARAA-VAHRPDALVVACNTASVHALAHLR 82
Query: 97 STF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
+ F P++ +G VPAIK AAA I +T T Y LI + +H V+
Sbjct: 83 AEFEPALPVIGTVPAIKPAAAAGGVVAI--WATSRTTGSAYQRGLIEEFGGAARVHEVAC 140
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV--IVLACTHYPLIVHVFRQLS 213
LA VE D +VL CTHY LI +
Sbjct: 141 HGLAEAVERADRAAIAAAVASAAARTP---------ADTTDVVLGCTHYELIDDLIAAAL 191
Query: 214 PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
P P ++D+IA + L R+ + +G+P
Sbjct: 192 PGPARLHGSADAIAAQT---LRRLTPATPPGDATLTVLHTGRP 231
>gi|153008159|ref|YP_001369374.1| Asp/Glu racemase [Ochrobactrum anthropi ATCC 49188]
gi|151560047|gb|ABS13545.1| Asp/Glu racemase [Ochrobactrum anthropi ATCC 49188]
Length = 278
Score = 142 bits (360), Expect = 4e-32, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 4/217 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L + + +FD+GIG +++ +R P+ IY AD FPYG L +
Sbjct: 12 DLNDPVAVFDAGIGSYALVELIRRSQPQRDIIYFADRASFPYGAKSRDQLLSIMRSTIQY 71
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L V+A N ++ D L+S F ++ G P ++ A A + SG ++++ +
Sbjct: 72 -LTSLGAQTIVLASNAPSVMVLDTLKSEF-AVPVYGVAPPVRTALAASHSGKVAVMGVRS 129
Query: 131 TLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ ++ + + + L+++ + VE A + E K I
Sbjct: 130 MIESEELADFVRTQADNPGDVALINASAMVELVENGAFLRQPDETAQKVAAFCDDIAASY 189
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
D + L+ TH P + F P +LD +D +
Sbjct: 190 PLIDTLTLSSTHLPWLRPFFETARP-GWQFLDPADDV 225
>gi|332755092|gb|EGJ85457.1| asp/Glu/Hydantoin racemase family protein [Shigella flexneri
4343-70]
Length = 230
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 84/214 (39%), Gaps = 10/214 (4%)
Query: 49 GFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAF 104
PYGN + + + + + L +ACNT + ++ E +FP
Sbjct: 2 NAPYGNRSADDIISLTKKMLTFLQSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPI 59
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164
L + + Q + I++T T++ LI S ++ S LA +EE
Sbjct: 60 LSIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEE 119
Query: 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
++IKK + I I+L CTHYP++ + F ++P + +++ +
Sbjct: 120 GNLNAPAILNDIKKHV-NHLISLHPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAH 175
Query: 225 SIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258
A + L ++N + + SG +I
Sbjct: 176 DQAISIKNHLGQLNLLNSSNIGTLQINTSGSMEI 209
>gi|110806389|ref|YP_689909.1| hypothetical protein SFV_2500 [Shigella flexneri 5 str. 8401]
gi|110615937|gb|ABF04604.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 230
Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 83/214 (38%), Gaps = 10/214 (4%)
Query: 49 GFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE----LRSTFPSMAF 104
PYGN + + + + + L +ACNT + ++ E +FP
Sbjct: 2 NAPYGNRSADDIISLTKKMLTFLQSR-NVKLVAVACNTISSTLESEEYSGYAKSFP-FPI 59
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164
L + + Q + I++T T++ LI S ++ S LA +EE
Sbjct: 60 LSIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEE 119
Query: 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
+ IKK + I I+L CTHYP++ + F ++P + +++ +
Sbjct: 120 GNLNAPAILNNIKKHV-NHLISLHPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAH 175
Query: 225 SIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258
A + L ++N + + SG +I
Sbjct: 176 DQAISIKNHLGQLNLLNSSNIGTLQINTSGSMEI 209
>gi|312796622|ref|YP_004029544.1| glutamate racemase [Burkholderia rhizoxinica HKI 454]
gi|312168397|emb|CBW75400.1| Glutamate racemase (EC 5.1.1.3) [Burkholderia rhizoxinica HKI 454]
Length = 202
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 16/187 (8%)
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
LR P M +G P IK AA +++ + +L+T +TL+ + L+ Y C +
Sbjct: 2 LRERLP-MPIIGVEPGIKPAALQSRTRVAGVLATASTLKSARFNALLAQYGGDCRFVCQA 60
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
L +E G + + + + C D++VL CTHYP ++ R ++
Sbjct: 61 GHGLVDAIEAGDIGSPV----VMQRLAACLQPILDASADILVLGCTHYPFLLDAVRTITA 116
Query: 215 WPVDWLDNSDSIARRARCLLPRINT-----------HQTRVFDDHALFLSGKPDIAMRRL 263
+ +D ++IAR+ L T L +G R
Sbjct: 117 DRLHVIDTGEAIARQLVRRLTDQQLRVDTGPAAAHAEPTSAPAPLRLVTTGDAPQLARIA 176
Query: 264 MQGFGLK 270
Q +
Sbjct: 177 RQLLSVN 183
>gi|254304280|ref|ZP_04971638.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148324472|gb|EDK89722.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 257
Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 19/241 (7%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N I +FD+G+G +++ ++ P+ IY AD FPYG LK + +
Sbjct: 1 MNNPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRRSFPYGAKTTEELKNIIENSIDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K ++A N + D+ +G P +K + I+
Sbjct: 61 LKKGA-SFIILASNAPSITVLDK---IKKKDKVIGIYPPLKDVINDKKKNT-LIIGAKVM 115
Query: 132 LRR----TYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFI 185
+ Y + + Q H+ +S L +E ++ ++ E IK I+ C
Sbjct: 116 IDSPELQEYIKKEVGDFYKQFHVEN-ASP-LIQLIESGDFINNVEETEKTIKNFIDNC-- 171
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
E + + D I L+ TH P + F+++ P D +DS+ + R P I T + +V+
Sbjct: 172 ENKFGKLDSITLSSTHLPWLSSYFKKIIP-QAKLYDPADSLVKAIR---PYITTGEGKVY 227
Query: 246 D 246
Sbjct: 228 S 228
>gi|205355664|ref|ZP_03222434.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346441|gb|EDZ33074.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8421]
Length = 186
Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 14/194 (7%)
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATLRRT 135
+ +IACNTA D LR+ G + A +A A + ++ I +++T AT++
Sbjct: 1 MLIIACNTASAYALDALRAKA-HFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSE 59
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ S +I+ +++ + VEE + D ++ +E F K D +
Sbjct: 60 EYQKRLLSQGY-TNINALATGLFVPMVEEGI----FEGDFLQSAMEYYF--KNITTPDAL 112
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+LACTH+PL+ + + + D+I + R N + S
Sbjct: 113 ILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFYASSD 169
Query: 256 PDIAMRRLMQGFGL 269
+ L
Sbjct: 170 VESLKNTAKIWLNL 183
>gi|17902530|emb|CAC81005.1| glutamate racemase [Pseudanabaena sp. PCC 6903]
Length = 115
Score = 138 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+++ + I +FDSG+GGL VLQ++ +P +Y D PYG + + + +
Sbjct: 6 QQEARFPIGVFDSGVGGLTVLQEVHRQLPNESVVYFGDTARLPYGKRSPAEIIEYVYEIL 65
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF 104
+ + ++++ACNT+ L D +R F
Sbjct: 66 HWM-QSLEVKMAIMACNTSSALALDVVRPEFDIKLI 100
>gi|319779418|ref|YP_004130331.1| Glutamate racemase [Taylorella equigenitalis MCE9]
gi|317109442|gb|ADU92188.1| Glutamate racemase [Taylorella equigenitalis MCE9]
Length = 267
Score = 138 bits (350), Expect = 6e-31, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 106/260 (40%), Gaps = 17/260 (6%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++N KKL I +FD+GIG + +R P+ IY AD FPY LK
Sbjct: 1 MEN---LKKLVKPIAVFDAGIGSYAWARAIREKFPKQDIIYFADRANFPYAWKTKDELKA 57
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + D L V+ N + E++ S+ +G++P I A +++G
Sbjct: 58 CIKGAIECLADMGAC-LVVVTSNAPSITVVSEIKEEC-SVPVMGSIPPIASGVATSKTGE 115
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--EYACGIKIKEDEIKKEI 180
I L + S +HLV++ L + VE ++ + +++KK +
Sbjct: 116 IINLGVKILSSLPEFRFFVESISDDAKVHLVNAEDLVTTVESGQFITEHEKTVEQVKKFM 175
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + ++ DV L+ TH IV +F++ +P + +++ L +I +
Sbjct: 176 DD--VRQKYPNADVCTLSSTHLTWIVDIFQKAAP-DMQFINP-------VDRTLKKIEPY 225
Query: 241 QTRVFDDHALFLSGKPDIAM 260
+ + + + +
Sbjct: 226 TSEGSGTTLSYATSSEEYPL 245
>gi|261881951|gb|ACY04859.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 11/164 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L V+ACNTA L +E++ F + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLVVACNTASALALEEMQKHFK-IPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 156
>gi|261881907|gb|ACY04837.1| glutamate racemase [Helicobacter pylori]
gi|261881909|gb|ACY04838.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 11/173 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + +I +++ + +EE
Sbjct: 59 LAIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
I E E+ + + +V++L CTH+PLI L
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIESYFMEHFALLTP 165
>gi|296137849|ref|YP_003645092.1| glutamate racemase [Tsukamurella paurometabola DSM 20162]
gi|296025983|gb|ADG76753.1| Glutamate racemase [Tsukamurella paurometabola DSM 20162]
Length = 265
Score = 137 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 95/246 (38%), Gaps = 15/246 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG G + + L P+ + D PYG + + ++ + +Y
Sbjct: 3 VAVIDSGFGMVNYADALSRLRPDTELVLARDPDNMPYGLLPPERISECIVAMAGAA-ARY 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNT + R+ F P++ +G VPAI+ A A + ++ +T A
Sbjct: 62 RVDAIVVACNTGSMYALEAARARFEPAVPVIGVVPAIRPAGATGR--PFAVWATAAATVS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI ++ H + LA ++ + +
Sbjct: 120 DYQTSLIDAFADPSLAHRIPCYGLAEAIDSGDLDRVADAVA-------AAADATPPDIES 172
Query: 195 IVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+VL CTHY L+ R + + D+ + +AR+ L R+ A+
Sbjct: 173 VVLGCTHYGLVREQIVAALRARTGVDLTVFDSPEPVARQVLRRLGVDPGGPQRLGAVVAV 232
Query: 251 FLSGKP 256
SG+P
Sbjct: 233 LESGRP 238
>gi|261881911|gb|ACY04839.1| glutamate racemase [Helicobacter pylori]
gi|261881913|gb|ACY04840.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 114 -ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|261881953|gb|ACY04860.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 136 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKR-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI H
Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881937|gb|ACY04852.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 136 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 11/164 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVANKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 114 -ILESELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 156
>gi|30959112|gb|AAO73315.1| glutamate racemase [Helicobacter pylori]
Length = 184
Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 72/187 (38%), Gaps = 17/187 (9%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSD 224
I E E+ + + +VI+L CTH+PLI H + + D
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAHQIEGYFMGHFALSTLPLLIHSGD 172
Query: 225 SIARRAR 231
+I +
Sbjct: 173 AIVEYLQ 179
>gi|261881929|gb|ACY04848.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 11/164 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI H
Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAHQIEGYF 156
>gi|261881939|gb|ACY04853.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFTLLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|261881919|gb|ACY04843.1| glutamate racemase [Helicobacter pylori]
gi|261881933|gb|ACY04850.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 11/164 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 156
>gi|261881989|gb|ACY04878.1| glutamate racemase [Helicobacter pylori]
gi|261881991|gb|ACY04879.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 135 bits (342), Expect = 5e-30, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 67/170 (39%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +++ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIRQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261882001|gb|ACY04884.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 135 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKSHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881997|gb|ACY04882.1| glutamate racemase [Helicobacter pylori]
gi|261881999|gb|ACY04883.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKSHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNTPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881915|gb|ACY04841.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKEKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|25808759|gb|AAN74506.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L V+ACNTA L +E++ F + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLVVACNTASALALEEMQKHFK-IPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155
>gi|261881943|gb|ACY04855.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 114 -ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|261882017|gb|ACY04892.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGA-VP 109
G + +K+ + D ++ L ++ACNTA L +E++ P + +G+ +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGSSIL 59
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
AIKQ ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKD-KNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIESYFMEHFAL 162
>gi|261881945|gb|ACY04856.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 11/164 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +V++L CTH+PLI
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYF 156
>gi|261881957|gb|ACY04862.1| glutamate racemase [Helicobacter pylori]
gi|261881959|gb|ACY04863.1| glutamate racemase [Helicobacter pylori]
gi|261881963|gb|ACY04865.1| glutamate racemase [Helicobacter pylori]
gi|261881965|gb|ACY04866.1| glutamate racemase [Helicobacter pylori]
gi|261881967|gb|ACY04867.1| glutamate racemase [Helicobacter pylori]
gi|261881969|gb|ACY04868.1| glutamate racemase [Helicobacter pylori]
gi|261881971|gb|ACY04869.1| glutamate racemase [Helicobacter pylori]
gi|261881973|gb|ACY04870.1| glutamate racemase [Helicobacter pylori]
gi|261881977|gb|ACY04872.1| glutamate racemase [Helicobacter pylori]
gi|261881979|gb|ACY04873.1| glutamate racemase [Helicobacter pylori]
gi|261881983|gb|ACY04875.1| glutamate racemase [Helicobacter pylori]
gi|261882005|gb|ACY04886.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881935|gb|ACY04851.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNAMKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|25808621|gb|AAN74437.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808645|gb|AAN74449.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQDY-LNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808717|gb|AAN74485.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 67/172 (38%), Gaps = 11/172 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D + +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFNPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + +I +++ + +EE
Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
I E E+ + + +V++L CTH+PLI L
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIESYFMEHFALLTP 164
>gi|261881975|gb|ACY04871.1| glutamate racemase [Helicobacter pylori]
gi|261881981|gb|ACY04874.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLKAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261882003|gb|ACY04885.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 114 -ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|25808663|gb|AAN74458.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKR-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|261881985|gb|ACY04876.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 11/160 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +++ + D ++ L ++ACNTA L E++ + +G +
Sbjct: 1 GTKDPTTIRQFGLEAL-DFFKPHKIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209
I E E+ + + +VI+L CTH+PLI H
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAHQI 152
>gi|261881987|gb|ACY04877.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D ++ L ++ACNTA L +E++ + + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + V++L CTH+PLI H
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPKVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881941|gb|ACY04854.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|261881931|gb|ACY04849.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 11/164 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYF 156
>gi|25808649|gb|AAN74451.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + S ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QSYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|261881961|gb|ACY04864.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D ++ L ++ACNTA TL +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASTLALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|25808673|gb|AAN74463.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVANKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808737|gb|AAN74495.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVANKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILESELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808647|gb|AAN74450.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808749|gb|AAN74501.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +V++L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAQKIEGYF 155
>gi|261881947|gb|ACY04857.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|25808765|gb|AAN74509.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808677|gb|AAN74465.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 67/163 (41%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT+R N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIRSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYF 155
>gi|25808719|gb|AAN74486.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAQKIEGYFMEHFTL 161
>gi|261881993|gb|ACY04880.1| glutamate racemase [Helicobacter pylori]
gi|261881995|gb|ACY04881.1| glutamate racemase [Helicobacter pylori]
gi|261882007|gb|ACY04887.1| glutamate racemase [Helicobacter pylori]
gi|261882009|gb|ACY04888.1| glutamate racemase [Helicobacter pylori]
gi|261882011|gb|ACY04889.1| glutamate racemase [Helicobacter pylori]
gi|261882013|gb|ACY04890.1| glutamate racemase [Helicobacter pylori]
gi|261882015|gb|ACY04891.1| glutamate racemase [Helicobacter pylori]
gi|261882019|gb|ACY04893.1| glutamate racemase [Helicobacter pylori]
gi|261882021|gb|ACY04894.1| glutamate racemase [Helicobacter pylori]
gi|261882023|gb|ACY04895.1| glutamate racemase [Helicobacter pylori]
gi|261882025|gb|ACY04896.1| glutamate racemase [Helicobacter pylori]
gi|261882027|gb|ACY04897.1| glutamate racemase [Helicobacter pylori]
gi|261882029|gb|ACY04898.1| glutamate racemase [Helicobacter pylori]
gi|261882031|gb|ACY04899.1| glutamate racemase [Helicobacter pylori]
gi|261882033|gb|ACY04900.1| glutamate racemase [Helicobacter pylori]
gi|261882035|gb|ACY04901.1| glutamate racemase [Helicobacter pylori]
gi|261882037|gb|ACY04902.1| glutamate racemase [Helicobacter pylori]
gi|261882039|gb|ACY04903.1| glutamate racemase [Helicobacter pylori]
gi|261882041|gb|ACY04904.1| glutamate racemase [Helicobacter pylori]
gi|261882043|gb|ACY04905.1| glutamate racemase [Helicobacter pylori]
gi|261882045|gb|ACY04906.1| glutamate racemase [Helicobacter pylori]
gi|261882047|gb|ACY04907.1| glutamate racemase [Helicobacter pylori]
gi|261882049|gb|ACY04908.1| glutamate racemase [Helicobacter pylori]
gi|261882051|gb|ACY04909.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVP 109
G + +K+ + D ++ L ++ACNTA L +E++ P + +G ++
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSIL 59
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
AIKQ ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKD-KNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN---- 113
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 114 -ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|25808619|gb|AAN74436.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 11/172 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
I E E+ + + +VI+L CTH+PLI L
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFALLTP 164
>gi|25808643|gb|AAN74448.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKR-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808657|gb|AAN74455.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 11/172 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE G
Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEESILGG- 116
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
E+ + + +VI+L CTH+PLI L
Sbjct: 117 ----ELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFALLTP 164
>gi|25808685|gb|AAN74469.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808751|gb|AAN74502.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808755|gb|AAN74504.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTLLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|261881949|gb|ACY04858.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 66/170 (38%), Gaps = 11/170 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|25808659|gb|AAN74456.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|261881955|gb|ACY04861.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 69/171 (40%), Gaps = 13/171 (7%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-- 110
G + +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 111 --IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168
IKQ ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LSIKQQVKD-KNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN--- 113
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 114 --ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|25808695|gb|AAN74474.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +++ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIRQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQDY-LNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808763|gb|AAN74508.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKRQVANKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808693|gb|AAN74473.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KYSKIPIVGVIGPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAHQIEGYFMEHFTL 161
>gi|25808623|gb|AAN74438.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKR-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I + E+ + + +VI+L CTH+PLI
Sbjct: 113 ILDGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808711|gb|AAN74482.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +++ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIRQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808631|gb|AAN74442.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808669|gb|AAN74461.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ ++ +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSTIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808739|gb|AAN74496.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808703|gb|AAN74478.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQDY-LNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYF 155
>gi|25808735|gb|AAN74494.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808667|gb|AAN74460.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 66/163 (40%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ ++ +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSTIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808627|gb|AAN74440.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|261881917|gb|ACY04842.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 11/164 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHEIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKQQVKDKNTPILVLGTKATIQSNAYDNALKK-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 156
>gi|25808635|gb|AAN74444.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L V+ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLVVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQLKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|261881927|gb|ACY04847.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 131 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 11/164 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + VI+L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFAPLKILPKVIILGCTHFPLIAQKIEGYF 156
>gi|25808633|gb|AAN74443.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808639|gb|AAN74446.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A + I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVANKKAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808699|gb|AAN74476.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYF 155
>gi|261881923|gb|ACY04845.1| glutamate racemase [Helicobacter pylori]
gi|261881925|gb|ACY04846.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 131 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 11/164 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + VI+L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFAPLKILPKVIILGCTHFPLIARQIEGYF 156
>gi|25808761|gb|AAN74507.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFPHLKILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808727|gb|AAN74490.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAHQIEGYF 155
>gi|25808707|gb|AAN74480.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808729|gb|AAN74491.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808655|gb|AAN74454.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808715|gb|AAN74484.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT+R N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIRSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808671|gb|AAN74462.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTLLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808731|gb|AAN74492.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808713|gb|AAN74483.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPITIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808771|gb|AAN74512.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPVVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808709|gb|AAN74481.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KYSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPKVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808641|gb|AAN74447.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808725|gb|AAN74489.1| glutamate racemase [Helicobacter pylori]
gi|25808757|gb|AAN74505.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808675|gb|AAN74464.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808683|gb|AAN74468.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALGEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT+R N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIRSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYLMEHFAL 161
>gi|25808697|gb|AAN74475.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808629|gb|AAN74441.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808625|gb|AAN74439.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTPIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808679|gb|AAN74466.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 66/163 (40%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + +I +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNISHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFAPLEILPEVVILGCTHFPLIAHQIEGYF 155
>gi|25808651|gb|AAN74452.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKRQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808721|gb|AAN74487.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808769|gb|AAN74511.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155
>gi|25808733|gb|AAN74493.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKRQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808687|gb|AAN74470.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPA 110
+ +K+ + D ++ L ++ACNTA L +E++ P + +G ++ A
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILA 59
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
IKQ ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKD-KNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYF 155
>gi|25808665|gb|AAN74459.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808691|gb|AAN74472.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + S +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVSLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808705|gb|AAN74479.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 64/169 (37%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808701|gb|AAN74477.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKRQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155
>gi|25808681|gb|AAN74467.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L E++ + +G +
Sbjct: 1 TKDPITIKQFGLEAL-DFFKPHKIELLIVACNTASALALKEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808689|gb|AAN74471.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+K+ + D +Q L ++ACNTA L E++ + +G +
Sbjct: 1 TKGPTTIKQFGLEAL-DFFKPHQIGLLIVACNTASALALGEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMKHFTL 161
>gi|25808637|gb|AAN74445.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 66/163 (40%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + S ++ +++ + +EE
Sbjct: 59 AIKRQVKDKNAPILVLGTKATIQSNAYDNALKQ-QSYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808753|gb|AAN74503.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPA 110
+ +K+ + D ++ L ++ACNTA L +E++ P + +G ++ A
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIGLLIVACNTASALALEEMQKHSKIPIVGVIGPSILA 59
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
IKQ ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKD-KNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|261881921|gb|ACY04844.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 65/164 (39%), Gaps = 11/164 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + D ++ L ++ACNT L +E++ + +G +
Sbjct: 1 GTKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTVSALALEEMQ-KHSKIPIVGVIEPSI 58
Query: 113 QAAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 LAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE----- 112
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 156
>gi|25808743|gb|AAN74498.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHEIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155
>gi|25808745|gb|AAN74499.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLG-AVPA 110
+ +K+ + D ++ L ++ACNTA L +E++ P + +G ++ A
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILA 59
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
IKQ ++ I +L T AT++ + N + ++ +++ + +EE
Sbjct: 60 IKQQVKD-KNAPILVLGTKATIQSSAYDNALKQ-QGYLNVSHLATSLFVPLIEEN----- 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + +V++L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808767|gb|AAN74510.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHEIGLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNTPILVLGTKATIQSNAYDNALKK-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYF 155
>gi|25808723|gb|AAN74488.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 128 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFAPLKILPKVIILGCTHFPLIARQIEGYF 155
>gi|25808747|gb|AAN74500.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + VI+L CTH+PLI H
Sbjct: 113 ILEGELLETCMRYYFAPLKILPKVIILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808653|gb|AAN74453.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNT L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIELLIVACNTVSALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAAY---TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155
>gi|213579831|ref|ZP_03361657.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 134
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++C I ++ S L E G + +E+++ + E D +VL CTH+
Sbjct: 1 RFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVVLGCTHF 58
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD-IAMR 261
PL+ Q+ P +D+ +IARR LL + A ++ P +
Sbjct: 59 PLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLL 118
Query: 262 RLMQGFGLKS 271
++Q +G ++
Sbjct: 119 PVLQRYGFET 128
>gi|25808661|gb|AAN74457.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 126 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 15/171 (8%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D +Q L ++ACNTA L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHQIKLLIVACNTASALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHS--YVSQCHIHLVSSMILASRVEEYACG 168
A ++ I +L T AT++ N + Y++ H +++ + +EE
Sbjct: 59 AIKRQVANKNAPILVLGTKATIQSNAYDNALKQQGYLNGSH---LATSLFVPLIEE---- 111
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
I E E+ + + VI+L CTH+PLI
Sbjct: 112 -SILEGELVETCMRYYFTPFKILPGVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808741|gb|AAN74497.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 64/163 (39%), Gaps = 11/163 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + D ++ L ++ACNT L +E++ + +G +
Sbjct: 1 TKDPTTIKQFGLEAL-DFFKPHKIELLIVACNTVSALALEEMQ-KHSKIPIVGVIEPSIL 58
Query: 114 AAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A ++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 59 AIKRQVEDKNAPILVLGTKATIQSNAYDNALKQ-QGYLNVSHLATSLFVPLIEE-----S 112
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
I E E+ + + +VI+L CTH+PLI
Sbjct: 113 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIARQIEGYF 155
>gi|255532930|ref|YP_003093302.1| Asp/Glu/hydantoin racemase [Pedobacter heparinus DSM 2366]
gi|255345914|gb|ACU05240.1| Asp/Glu/hydantoin racemase [Pedobacter heparinus DSM 2366]
Length = 508
Score = 125 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 49/230 (21%), Positives = 81/230 (35%), Gaps = 57/230 (24%)
Query: 15 SILIFDSGIGGLIVLQKMRF--------------LMPE---YHFIYVADDVGFPYGN--- 54
I +FDSG GGL +L + +P+ FIY+AD PYGN
Sbjct: 59 PIGVFDSGTGGLTILNTLVQFDQHNNATKFAGKDNIPDFAKEKFIYLADQANMPYGNYYS 118
Query: 55 -WEDHALKKRLMFLFSDIL---------------DKYQPVLSVIACNTAFTLIKDELRST 98
++ L + ++ +L DK + VIACNTA K+ +
Sbjct: 119 EKKNDLLVEHIIKDAQFLLSDKYYLNNTTKNYSSDKQKVKAIVIACNTATAYGKEYIEDF 178
Query: 99 FP----SMAFLGAVPAIKQ----AAAYTQSGLISILSTPATLRRTYTSNLIHS------Y 144
++ +G + A Q ++G I + +T T+ N I + Y
Sbjct: 179 IKTTGINLKVIGVIDAGAQGTLDVFKKDENGSIGVFATVGTIASKGYENTILALKDKLGY 238
Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
++ LA V+E + D I ++ G + D
Sbjct: 239 KGNLQVYNQGGYGLAEAVDE-------EPDFINRKAIAPTANYRGPKLDS 281
Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 19/79 (24%)
Query: 194 VIVLACTHYPLIVHVFRQL------------------SPWPVDWLDNSDSIARRARCLLP 235
+VL CTHYP ++ R++ + +D + ++A L
Sbjct: 346 ALVLGCTHYPFLISDIRKILSDLYNFQKNGNFIYRTFMNKDIQIIDPAINVATELYTYLN 405
Query: 236 RINTHQTR-VFDDHALFLS 253
+ + + F+S
Sbjct: 406 KQHLFNPAGNMNASEFFIS 424
>gi|163838785|ref|YP_001623190.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
gi|162952261|gb|ABY21776.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
Length = 271
Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 89/219 (40%), Gaps = 10/219 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FD+G+G +++ +R P IY AD FPYG L + + L+
Sbjct: 9 GPIAVFDAGLGSYDIVRALRNHFPAVDLIYFADRASFPYGAKSASELFEVALRSCQY-LN 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS-TPATL 132
+I N + D + + + LG +P I+ A + + + +L+ +
Sbjct: 68 SLGASCVIIGSNAPSVTVLDAVAAQC-AFPVLGVLPPIQVALSSIEPTEVLLLAGAASMT 126
Query: 133 RRTYTSNLIHSYVSQ--CHIHLVSSMILASRVE--EYACGIKIKEDEIKKEIEGCFIEKE 188
+ + I+ Q + ++ L VE ++ + + ++ +E
Sbjct: 127 QSQQLQDFINREAGQQAWRVQTAAATKLIDLVESGQFVADPSGTVALVAEFLDQ--QRRE 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
G+ + L+ TH P + F++ +P + + +DS+A
Sbjct: 185 GQTIGGVTLSSTHLPWLSFAFKEAAP-NLQLFNPADSVA 222
>gi|91200741|emb|CAJ73793.1| hypothetical protein kuste3038 [Candidatus Kuenenia
stuttgartiensis]
Length = 916
Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/287 (19%), Positives = 106/287 (36%), Gaps = 50/287 (17%)
Query: 1 MKIDNYPCEK-KLQNS--ILIFDSGIGGLIVLQKMRFLMP--EYHFIYVADDVGFPYGNW 55
M+ N P +K K + I IFDSG GG+IV +K+ ++P + D FP+G
Sbjct: 542 MEAKNAPQKKMKDKKPLIIGIFDSGQGGIIVTEKLNRILPVGNIKLLLFTDKANFPFGQK 601
Query: 56 EDHALKKRLMFLFSDILDKYQPV--------------------------------LSVIA 83
+ +I ++ + + + A
Sbjct: 602 SKEEINDITFRAVHEINERCKTMHQSNGFFYRFIYNTPYFLKTVFIWLGIIPRDVIVCFA 661
Query: 84 CNTAFTLIKDE-LRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
CNT T++ + LR FP + F+G + + A + I I+ T T++ I
Sbjct: 662 CNTVDTMVNHKKLRIRFPHIQFIGPVKKTLLKINALPKDARIGIIGTVGTIKSGIYEKRI 721
Query: 142 HSYVSQCHIHLVSSMILASRVE---EYACGIKIKEDEIKKEIEGC----FIEKEGKR-TD 193
+ H+ + +LA E + + + K+ E K E K
Sbjct: 722 RE--AGYHVLAKPTPLLAVLSEMLYKKSFDTEEKQKEFYKTARDLIYVNLKEFIKKNTIS 779
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ LACTHY + + L V+++ +++ + ++ +I
Sbjct: 780 HLCLACTHYDYLKSTLKDLFGE-VEFISTVETVIEEVQDIINQIPLQ 825
>gi|318076535|ref|ZP_07983867.1| glutamate racemase [Streptomyces sp. SA3_actF]
Length = 136
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 3 IALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAAL 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+P V+ACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT
Sbjct: 62 EPDALVVACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIH 151
Y LI + ++
Sbjct: 120 EYQRRLIAEFAPGGNVT 136
>gi|207110490|ref|ZP_03244652.1| glutamate racemase [Helicobacter pylori HPKX_438_CA4C1]
Length = 87
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + +K+ + D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEAL-DFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRST 98
Q L ++ACNTA L +E++
Sbjct: 62 QIELLIVACNTASALALEEMQKH 84
>gi|227873306|ref|ZP_03991571.1| possible glutamate racemase [Oribacterium sinus F0268]
gi|227840873|gb|EEJ51238.1| possible glutamate racemase [Oribacterium sinus F0268]
Length = 144
Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 56/142 (39%), Gaps = 7/142 (4%)
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
++T T++ LI + L+ S + +E K E++ + +
Sbjct: 1 MATEHTIQGERLHQLISRFGDPSQFLLLPSPGIVRLLEAG----KGDSPEMEDYLHQLLL 56
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ + IVL CTH+P + ++ P+PV + D ++ A+ R L + V
Sbjct: 57 PYQKEAISSIVLGCTHFPFVKEQIQKALPYPVQFFDGAEGTAKETRHRLEERGLLKEGVQ 116
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
+ S D + LM+ F
Sbjct: 117 KGEVVLFSSNEDSS---LMEAF 135
>gi|213850149|ref|ZP_03381047.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 130
Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+C I ++ S L E G + +E+++ + E D +VL CTH+PL+
Sbjct: 1 ECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEP--PDTVVLGCTHFPLLR 58
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD-IAMRRLMQ 265
Q+ P +D+ +IARR LL + A ++ P + ++Q
Sbjct: 59 DELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQ 118
Query: 266 GFGLKS 271
+G ++
Sbjct: 119 RYGFET 124
>gi|46205905|ref|ZP_00210084.1| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1]
Length = 132
Score = 121 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 6/125 (4%)
Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
+ + VE+ E+ + + D +VL CTHYPL+
Sbjct: 3 PGLTLTTQACPEFVPLVEQGVTSGP----EVLEVAHRYLDPVKAAGVDTLVLGCTHYPLL 58
Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHALFLSGKPDIAMRRL 263
+ V + +++ A+ L + ++R H +G +
Sbjct: 59 TGAISYVMGDEVTLVSSAEETAKDVYRTLVAHDLERSRDAGPPRHRFLATGSAEPFEHLA 118
Query: 264 MQGFG 268
+ G
Sbjct: 119 RRFLG 123
>gi|284051284|ref|ZP_06381494.1| glutamate racemase [Arthrospira platensis str. Paraca]
Length = 76
Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ +P +Y AD PYG + + + + + +
Sbjct: 8 QKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITWAVA 67
Query: 74 KYQPVLSVIA 83
+ + ++A
Sbjct: 68 Q-DVKMVLMA 76
>gi|76800015|ref|ZP_00781954.1| Glutamate racemase [Streptococcus agalactiae 18RS21]
gi|77412358|ref|ZP_00788669.1| glutamate racemase [Streptococcus agalactiae CJB111]
gi|76584668|gb|EAO61451.1| Glutamate racemase [Streptococcus agalactiae 18RS21]
gi|77161578|gb|EAO72578.1| glutamate racemase [Streptococcus agalactiae CJB111]
Length = 109
Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 3/99 (3%)
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ KK + GK D ++L CTHYPL+ + + + V +D+ R
Sbjct: 1 MSSSLAKKVVYETLSPLVGK-LDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDI 59
Query: 231 RCLLPR--INTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
LL IN + H + + P Q
Sbjct: 60 SVLLNYFEINHNWQNKHGGHHFYTTASPKGFKEIAEQWL 98
>gi|169840381|ref|ZP_02873569.1| glutamate racemase [candidate division TM7 single-cell isolate
TM7a]
Length = 92
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ A T++G I ++ T AT++ I + + + + + VEE K
Sbjct: 4 ARTAIEATKNGKIGVIGTKATIQSGKYEEEIKLFNKKVEVLQKACPLFVPAVEEGILSGK 63
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ + + I+ + +GK D ++L CTHY
Sbjct: 64 L----VNQIIKTYLDDFKGK-VDTLILGCTHY 90
>gi|213861499|ref|ZP_03385969.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 84
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 2 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 60
Query: 133 RRTYTSNLIHSYVSQCHIHLVSS 155
+R+YT LI + ++C I ++ S
Sbjct: 61 KRSYTHELIARFANECQIEMLGS 83
>gi|309807427|ref|ZP_07701390.1| glutamate racemase domain protein [Lactobacillus iners LactinV
01V1-a]
gi|308169349|gb|EFO71404.1| glutamate racemase domain protein [Lactobacillus iners LactinV
01V1-a]
Length = 94
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+DN P I I DSG+GGL VL+K+ +P I++ D PYG+ +
Sbjct: 1 MDNRP--------IGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIIN 52
Query: 63 RLMFLFSDILDKYQPVLSVI 82
+L K V+ ++
Sbjct: 53 LTRASVKFLLTKNVKVIILV 72
>gi|213421905|ref|ZP_03354971.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 109
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
G + +E+++ + E D +VL CTH+PL+ Q+ P +D+ +IA
Sbjct: 1 GDSVSLEELRRILRPWLRMPEP--PDTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIA 58
Query: 228 RRARCLLPRINTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
RR LL + A ++ P + ++Q +G ++
Sbjct: 59 RRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 103
>gi|225010451|ref|ZP_03700922.1| glutamate racemase [Flavobacteria bacterium MS024-3C]
gi|225005280|gb|EEG43231.1| glutamate racemase [Flavobacteria bacterium MS024-3C]
Length = 143
Score = 99.2 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 51/131 (38%), Gaps = 17/131 (12%)
Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
I L + +E G +E+ + ++ + + K D +VL CTHYP +
Sbjct: 3 GGVEIIEQEGTGLVALIE----GGFADGEEVAEVLKSYLLPMQEKGIDRLVLGCTHYPYL 58
Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-------------HALFL 252
+ +++ ++ +D + ++A++ + +L + + + +
Sbjct: 59 IPAIKKILSSRIEIIDAAGAVAKQTKKVLEKEGLLVRETVTEELTANDLISKAASYEFYS 118
Query: 253 SGKPDIAMRRL 263
+G D+ L
Sbjct: 119 NGATDVLKSFL 129
>gi|298254740|ref|ZP_06978326.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19A]
Length = 92
Score = 96.6 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 106 GAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164
G + P A +Q G I ++ TP T++ IH + ++ A VE
Sbjct: 2 GVILPGASAAIKSSQGGKIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVES 61
Query: 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
A + + + + + + D ++L CT
Sbjct: 62 GALSTSVTKKVVYETLRPLV-----GKVDSLILGCT 92
>gi|332756498|gb|EGJ86849.1| hypothetical protein SF274771_2973 [Shigella flexneri 2747-71]
Length = 161
Score = 95.4 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ I++T T++ LI S ++ S LA +EE ++IKK +
Sbjct: 7 KNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHV 66
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
I I+L CTHYP++ + F ++P + +++ + A + L ++N
Sbjct: 67 -NHLISLHPVN--EIILGCTHYPIVQNFFEAVAP-DIKFINPAHDQAISIKNHLGQLNLL 122
Query: 241 QTRVFDDHALFLSGKPDI 258
+ + SG +I
Sbjct: 123 NSSNIGTLQINTSGSMEI 140
>gi|309807437|ref|ZP_07701400.1| glutamate racemase family protein [Lactobacillus iners LactinV
01V1-a]
gi|308169359|gb|EFO71414.1| glutamate racemase family protein [Lactobacillus iners LactinV
01V1-a]
Length = 88
Score = 95.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ D ++L CTHYPL++ + +D +D +A+ +L R N + H
Sbjct: 2 QYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLAEK-GGKHEY 60
Query: 251 FLSGKPDIAMRRLMQG 266
+ +G P M+ +
Sbjct: 61 YTTGDPIKFMKIAQKW 76
>gi|293596522|ref|ZP_06684240.1| glutamate racemase [Listeria monocytogenes J2818]
gi|293589868|gb|EFF98202.1| glutamate racemase [Listeria monocytogenes J2818]
Length = 88
Score = 94.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSG 254
+L CTHYPL+ + V +++ + A LL N + +H F +G
Sbjct: 2 ILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRFFTTG 61
Query: 255 KPDIAMRRLMQGF 267
I
Sbjct: 62 STQIFKDIAKDWL 74
>gi|298254739|ref|ZP_06978325.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19A]
Length = 86
Score = 92.7 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALFLS 253
+L CTHYPL+ + + + V +D+ R LL ++ R H + +
Sbjct: 2 ILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRFYTT 61
Query: 254 GKPDIAMRRLMQGF 267
+ +
Sbjct: 62 ASSQSFAQIGEEWL 75
>gi|241758577|ref|ZP_04756692.1| glutamate racemase [Neisseria flavescens SK114]
gi|241321229|gb|EER57401.1| glutamate racemase [Neisseria flavescens SK114]
Length = 185
Score = 91.9 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 164 EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
E G ++ + + ++ F + D +VL CTH+PL+ + + + V +D++
Sbjct: 73 EGWLGHEVTRLTVCEYLKPLFAD----GIDTLVLGCTHFPLLKPLIGREAG-NVALVDSA 127
Query: 224 DSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGF 267
++A +L + T D+ ++S P + R + + F
Sbjct: 128 ITMAEETARVLAQEGLLNTDNNNPDYRFYVSDIP-LKFRIIGERF 171
>gi|225075495|ref|ZP_03718694.1| hypothetical protein NEIFLAOT_00503 [Neisseria flavescens
NRL30031/H210]
gi|224953130|gb|EEG34339.1| hypothetical protein NEIFLAOT_00503 [Neisseria flavescens
NRL30031/H210]
Length = 115
Score = 91.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 42/107 (39%), Gaps = 6/107 (5%)
Query: 163 EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
EE ++ + + ++ + D +VL CTH+PL+ + + + V +D+
Sbjct: 2 EEGWLEHEVTRLTVCEYLKPLLAD----GIDTLVLGCTHFPLLKPLIGREA-HNVALVDS 56
Query: 223 SDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
+ + A +L + T D+ ++S P + G
Sbjct: 57 AITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 103
>gi|255022683|ref|ZP_05294669.1| glutamate racemase [Listeria monocytogenes FSL J1-208]
Length = 44
Score = 91.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW 55
++ +I DSG+GGL V++++ +P Y+ D PYG
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPR 44
>gi|7671531|emb|CAB89281.1| hypothetical protein [Clostridium cellulolyticum H10]
Length = 125
Score = 85.0 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Query: 150 IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209
+ + L E + IKK+++G + VL CTH+P+ ++ F
Sbjct: 5 VDYLPFPELVELAENMVFDYEKVIPVIKKKLDGYNL----NNYKTFVLGCTHFPIYINAF 60
Query: 210 RQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+++ P +D +D S+ R + LL + T + + +F
Sbjct: 61 KEVLPPFIDIIDGSEGTIRYLKLLLEERHLISTNINGGNIVFF 103
>gi|325128800|gb|EGC51661.1| glutamate racemase 1 [Neisseria meningitidis N1568]
Length = 94
Score = 83.5 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVF 245
D +VL CTH+PL+ + + + V +D++ + A +L + T
Sbjct: 1 MLADGIDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNN 59
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
D+ ++S P + G
Sbjct: 60 PDYRFYVSDIPLKFRTIGERFLG 82
>gi|167741430|ref|ZP_02414204.1| glutamate racemase [Burkholderia pseudomallei 14]
Length = 113
Score = 83.5 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 2 YLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERGLRAP 61
Query: 243 ---RVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 62 ASLRPAPLPRFCSTSDGRQLQALAATLLGLDA 93
>gi|326392486|ref|ZP_08213869.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200]
gi|325991473|gb|EGD50082.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200]
Length = 96
Score = 82.7 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 3/94 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + + VIACNT +I +S + + F + AA YT + I ++T T
Sbjct: 1 MREQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGAIATTRT 57
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY 165
+ I ++ + +E+
Sbjct: 58 VESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKG 91
>gi|238761263|ref|ZP_04622240.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638]
gi|238761516|ref|ZP_04622492.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638]
gi|238700490|gb|EEP93231.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638]
gi|238700743|gb|EEP93483.1| Asp/Glu racemase [Yersinia kristensenii ATCC 33638]
Length = 182
Score = 82.3 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 98 TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSM 156
S+ +G +P +K A +++ I+IL + + +I + + +C ++ V++
Sbjct: 6 KLASLPVIGILPPVKDACLNSKTKKIAILGVRSMVESPELKRYIIENTIEECDVYGVNAS 65
Query: 157 ILASRVEEYAC--GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
L + VE+++ + + + +E DVI L+ TH P + F P
Sbjct: 66 ELVNLVEDFSFRNDKEKTQQSVSLFLEKLLEIY--PNIDVITLSSTHLPWLKEFFLNAQP 123
Query: 215 WPVDWLDNSDSI 226
+ +LD SD +
Sbjct: 124 -HIIFLDPSDKV 134
>gi|325475083|gb|EGC78269.1| Asp/Glu/Hydantoin family Racemase [Treponema denticola F0402]
Length = 224
Score = 81.1 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 68/171 (39%), Gaps = 8/171 (4%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
AL+ + ++ + K + VI CN+ + I E ++ + K+ A
Sbjct: 36 SQEALENLFIKNSNEAIKKGA-DIIVIYCNSLSSAIDYEKIQRLLNIQIFSPLDTYKKLA 94
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
++ I+IL+ L +I Y + + + +M + +E +I +
Sbjct: 95 DDCKN--IAILAANG-LAAYTIDKIIQKYNREKNTIPIGNMSIVQLIENGLPPAEIIKLL 151
Query: 176 IKKEIEGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
K IE + D ++L CTH+P I + ++ + + +D ++
Sbjct: 152 NLKGFLSYLENIEISEYKIDSLMLGCTHFPYIKNELQKHT--SIRIVDPAE 200
>gi|304440381|ref|ZP_07400270.1| Asp/Glu/Hydantoin family racemase [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371133|gb|EFM24750.1| Asp/Glu/Hydantoin family racemase [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 215
Score = 80.4 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 67/174 (38%), Gaps = 9/174 (5%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114
L + D + + + CN+ I LR T M + + K
Sbjct: 46 SVEELTNIVKEKIEDAKENGAEKIFIY-CNSLSVAIDLKYLRET-TGMEIITPIDVYKNL 103
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
++ I+I++ A + + + I +I + ++ L +E+ +I +
Sbjct: 104 DKKYKN--IAIIA--ANSKSAFKIDQILCEEEFRNIVAIGNLTLVEAIEDKLNPEEIIKL 159
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++ F + ++ D+I+L CTH+P I +L+ + LD + + +
Sbjct: 160 LALDKLADYFNNIKREKLDLIILGCTHFPYIKEELERLT--DIKILDPAAEMIK 211
>gi|42527702|ref|NP_972800.1| racemase [Treponema denticola ATCC 35405]
gi|41818530|gb|AAS12719.1| racemase, Asp/Glu/Hydantoin family [Treponema denticola ATCC 35405]
Length = 224
Score = 80.4 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 67/171 (39%), Gaps = 8/171 (4%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
AL+ + ++ + K + VI CN+ + I E ++ + K+
Sbjct: 36 SQEALENLFIKNSNEAIKKGA-DIIVIYCNSLSSAIDYEKIQRLLNIQIFSPLDTYKKLT 94
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
++ I+IL+ L +I Y + + + +M + +E +I +
Sbjct: 95 DDCKN--IAILAANG-LAAYTIDKIIQKYNREKNTIPIGNMSIVQLIENGLPPAEIIKLL 151
Query: 176 IKKEIEGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
K IE + D ++L CTH+P I + ++ + + +D ++
Sbjct: 152 NLKGFLSYLENIEINDYKIDSLMLGCTHFPYIKNELQKHT--SIRIVDPAE 200
>gi|330819549|ref|YP_004348411.1| Aspartate racemase [Burkholderia gladioli BSR3]
gi|327371544|gb|AEA62899.1| Aspartate racemase [Burkholderia gladioli BSR3]
Length = 504
Score = 76.5 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 77/212 (36%), Gaps = 28/212 (13%)
Query: 29 LQKMRFLMPEYHFIYVAD-DVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
L+ + P+ D G D + ++ L++ L I CNTA
Sbjct: 282 LKLIVEQNPQIP-----DRTAHL-VGEGPDPTV---SLYAACKRLEQGGAKLVAIPCNTA 332
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLRRTYTSNLIHSYV 145
+ + ++ S+ + + + ++ I +L+T TL +
Sbjct: 333 HAFV-ERIQPRL-SIPIVNMLTVTARHLRERFPEAREIGVLATSGTLASGVYREAL---A 387
Query: 146 SQCHIHLVSSMILASRV------EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
++ + LV L +RV E ++ +++IE V++L C
Sbjct: 388 AEGFVQLVPPPALQARVMAAIYGEAGVKAGFVQGRC-REDIEAALDALVAAGARVVLLGC 446
Query: 200 THYPLIVHVFRQLSPWP---VDWLDNSDSIAR 228
T PL++ +++ V +D ++ +AR
Sbjct: 447 TELPLLLPA-GEIAGPGGARVSLVDPTEVLAR 477
>gi|306820339|ref|ZP_07453978.1| Asp/Glu/Hydantoin family racemase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551668|gb|EFM39620.1| Asp/Glu/Hydantoin family racemase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 216
Score = 75.4 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 66/177 (37%), Gaps = 8/177 (4%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
L + + + CN+ + + E + ++ + + K
Sbjct: 46 SKDELYDLFYSTCEKAIKLGAAKIFLY-CNSLSSSVDYEKVAKSLNIEIITPLETYKSLP 104
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+Y ++ ++ + + N+IH Y + + +M + +E+ +I E+
Sbjct: 105 SYCKN---IVILSANGVSAYNIDNIIHKYNKDVNTISIGNMSIVESIEDKKSPRQIMEEL 161
Query: 176 IKKEIEGCFIEKEGKR--TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + TD ++L CTH+P + + L+ ++ +D +D + RR
Sbjct: 162 NLEGFIKYLENINHPKYKTDTLILGCTHFPYLKKEIKLLT--TLNIIDTNDDMIRRL 216
>gi|167040409|ref|YP_001663394.1| Asp/Glu racemase [Thermoanaerobacter sp. X514]
gi|256752253|ref|ZP_05493116.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus CCSD1]
gi|300914493|ref|ZP_07131809.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X561]
gi|307724271|ref|YP_003904022.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X513]
gi|166854649|gb|ABY93058.1| Asp/Glu racemase [Thermoanaerobacter sp. X514]
gi|256748821|gb|EEU61862.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus CCSD1]
gi|300889428|gb|EFK84574.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X561]
gi|307581332|gb|ADN54731.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X513]
Length = 217
Score = 75.4 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 20/174 (11%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114
+ AL ++++ + D K +I CN+ I + ++ +P P
Sbjct: 51 KPDALTQKVISIIGDF-QKQNIRKVMIYCNSLSAAIDLELVKQKYPDTNI--VTPLQVYH 107
Query: 115 AAYTQSGLISILSTPA----TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ ++ + IL+ T+ + + N I V+++ + +E ++
Sbjct: 108 SLASRYKRLVILAANGQSLKTIEKIFYEN-----NPTIQIIGVTTLPVIRAIE----NLE 158
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
I E I K + K + +VL CTH P + Q V +D ++
Sbjct: 159 IPEIIIDKFNLADLVPKNF-NAEGLVLGCTHLPYLKEKLEQKL--NVPIIDPAE 209
>gi|167037747|ref|YP_001665325.1| Asp/Glu racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116162|ref|YP_004186321.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856581|gb|ABY94989.1| Asp/Glu racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929253|gb|ADV79938.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 217
Score = 75.4 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 20/174 (11%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114
+ AL ++++ + D K +I CN+ I + ++ +P P
Sbjct: 51 KPDALTQKVISIIGDF-QKQNIRKVMIYCNSLSAAIDLELVKQKYPDTNI--VTPLQVYH 107
Query: 115 AAYTQSGLISILSTPA----TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ ++ + IL+ T+ + + N I V+++ + +E ++
Sbjct: 108 SLASRYKRLVILAANGQSLKTIEKIFYEN-----NPTIQIIGVTTLPVIRAIE----NLE 158
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
I E I K + K + +VL CTH P + Q V +D ++
Sbjct: 159 IPEIIIDKFNLADLVPKNF-NAEGLVLGCTHLPYLKEKLEQKL--NVPIIDPAE 209
>gi|168185453|ref|ZP_02620088.1| aspartate racemase [Clostridium botulinum C str. Eklund]
gi|169296186|gb|EDS78319.1| aspartate racemase [Clostridium botulinum C str. Eklund]
Length = 252
Score = 74.6 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 10/186 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + ++ CNTA D+++ ++ F+ + K I +L+T
Sbjct: 72 LKLMGADIIIMPCNTA-HFFLDKIQKVV-NIPFINMIDEVAKYILNICSDKRIGLLATQG 129
Query: 131 TLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T + +Y I+ + + G+K ++ + ++ E +
Sbjct: 130 TYKGKVYETCFKNYNIDVITPREKYKDIILDLIYQVKKGVKSFDESL---VKRILKEFKD 186
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
K IVL CT P++ + R ++ ++D +AR + R + RV +
Sbjct: 187 KNIKTIVLGCTELPILFNDIRFNELKDFRFISSTDILARET---VKRALELERRVSYERN 243
Query: 250 LFLSGK 255
+
Sbjct: 244 KCTTDN 249
>gi|206895393|ref|YP_002246837.1| glutamate racemase, putative [Coprothermobacter proteolyticus DSM
5265]
gi|206738010|gb|ACI17088.1| glutamate racemase, putative [Coprothermobacter proteolyticus DSM
5265]
Length = 268
Score = 73.4 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 69/199 (34%), Gaps = 35/199 (17%)
Query: 17 LIFDSGIGG----LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
L++DSGIGG L ++ + ++ AD + FP G + L L F
Sbjct: 19 LVYDSGIGGAWFSL----ELLRRKKAHRVVFYADTLNFPLGLKSETELYNILDQFFGYAS 74
Query: 73 DKYQPVLSV-----IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS--- 124
V +ACNT ++ +P P + +GLI
Sbjct: 75 VAATKPAEVFDGIFLACNTISSVYLRY----WPVFKKKVPFPIVH--TYAYHNGLIGLPK 128
Query: 125 --ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
IL+T AT+R + + + + + ++ +E K ++
Sbjct: 129 PLILATEATVRARIYTY----FTAGRGVEMPAT----DLIEALQQD---DTQRAKGLVKQ 177
Query: 183 CFIEKEGKRTDVIVLACTH 201
+R +VL CTH
Sbjct: 178 TATFARKERFSHVVLGCTH 196
>gi|309388341|gb|ADO76221.1| Asp/Glu/hydantoin racemase [Halanaerobium praevalens DSM 2228]
Length = 219
Score = 73.4 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 59/180 (32%), Gaps = 13/180 (7%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ + + + L + +I CN+ ++ + ++ + P
Sbjct: 53 PKKLEEI---TLEKIEN-LKIKEAEYIIIYCNSLSAVLDKKKLEKLSAIRII--TPLDIY 106
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
I+IL+ + + + + + + +E+ I +
Sbjct: 107 KNLVIDKKRIAILA-ANSQSAAKIEKMFMQKNPKLEYVSAGILPIVNYIEQRVDPATIVK 165
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ EI F + E + VL CTH+P + ++ P ++ + I R+ +
Sbjct: 166 EYGLLEIISSFKKMEIAKI---VLGCTHFPYLEKEIMKIFPE---IINPAQEIVRQIKNY 219
>gi|187921369|ref|YP_001890401.1| aspartate racemase [Burkholderia phytofirmans PsJN]
gi|187719807|gb|ACD21030.1| aspartate racemase [Burkholderia phytofirmans PsJN]
Length = 497
Score = 73.1 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 19/191 (9%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+ D + ++ L+ L I CNTA ++ + S+ + +
Sbjct: 298 GDGPDPTI---SLYATCKKLESGDADLIAIPCNTAHAFVERI--QPYLSIPIVNMLTVTV 352
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ T + +L+T T+ + S + V L +RV E G K
Sbjct: 353 RHLRETYPALRSVGVLATSGTIASGVYEKALESEGLR---QTVPRAELQARVMEAIYGNK 409
Query: 171 -----IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDN 222
+ +I + +VI+L CT PL++ + V +D
Sbjct: 410 GVKAGFTTGQCLDDISAAIDGLVAEGVEVIILGCTELPLLLPK-QSFVGTTGARVSLVDP 468
Query: 223 SDSIARRARCL 233
+D +AR+ L
Sbjct: 469 TDVLARQCVIL 479
>gi|307264783|ref|ZP_07546345.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter wiegelii Rt8.B1]
gi|326389915|ref|ZP_08211478.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200]
gi|306920041|gb|EFN50253.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter wiegelii Rt8.B1]
gi|325993975|gb|EGD52404.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200]
Length = 216
Score = 72.7 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 62/172 (36%), Gaps = 14/172 (8%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114
+ L ++++ + D K +I CN+ I + ++ +P P
Sbjct: 51 KPDVLTQKVISIIGDF-KKENIKKIMIYCNSLSAAIDLELVKQKYPDTNI--VTPLQVYH 107
Query: 115 AAYTQSGLISILSTPATLRR-TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
+ ++ + I + A + + + I ++ + + +E + +I E
Sbjct: 108 SVASKYNRLVIWA--ANSQSLEAIEKIFYENNPLVQIIGITMLPIIRAIENF----EIPE 161
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
I+K + K D IVL CTH P + + + +D ++
Sbjct: 162 VIIEKFSLADLVPKNF-NADGIVLGCTHLPYLKEKLAEKL--NMHIIDPAEE 210
>gi|224826368|ref|ZP_03699470.1| aspartate racemase [Lutiella nitroferrum 2002]
gi|224601469|gb|EEG07650.1| aspartate racemase [Lutiella nitroferrum 2002]
Length = 476
Score = 71.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 18/181 (9%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-- 121
+ L+ I CNTA + + + + + SG
Sbjct: 299 ALLATCQRLEADGAKAIAIPCNTAHAFVAAI--QPYLTTPIVNMLTETIAHIRTRYSGDK 356
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS-MILASRVEE---YACGIK--IKEDE 175
+ +L+T T++ Q I L++ +V CG+K E E
Sbjct: 357 PVGLLATAGTVQSRVYHAA----AEQAGIRLIAPEPPFQDKVMNAIYGECGVKAGFTEGE 412
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLI---VHVFRQLSPWPVDWLDNSDSIARRARC 232
K ++ ++++L CT PL+ H +L V +D +D +ARR
Sbjct: 413 SKTDLLAAAEHLAQAGAEILILGCTELPLLFPQSHEI-ELDGRTVALIDPTDILARRCVQ 471
Query: 233 L 233
L
Sbjct: 472 L 472
>gi|323529527|ref|YP_004231679.1| aspartate racemase [Burkholderia sp. CCGE1001]
gi|323386529|gb|ADX58619.1| aspartate racemase [Burkholderia sp. CCGE1001]
Length = 487
Score = 71.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 16/176 (9%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAY-TQSG 121
++ L++ + I CNTA ++ + + + + ++ +
Sbjct: 306 SLYATCKRLEEGGADIIAIPCNTAHAFVERI--QPYLRVPIVNMLTETVRYVHEHYPAQR 363
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-----IKEDEI 176
I +L+T T+ + + Q + L SRV + G +
Sbjct: 364 KIGVLATSGTMASGVYEKALEAQGLQ---QIAPEPALQSRVMQAIYGKQGVKAGFTAGAC 420
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARR 229
+I + +VIVL CT PL++ + V +D + +ARR
Sbjct: 421 HDDIAAAVEGLIDEGVEVIVLGCTELPLLLPH-AEFVGSGGARVTLIDPTHVLARR 475
>gi|299143380|ref|ZP_07036460.1| racemase, Asp/Glu/Hydantoin family [Peptoniphilus sp. oral taxon
386 str. F0131]
gi|298517865|gb|EFI41604.1| racemase, Asp/Glu/Hydantoin family [Peptoniphilus sp. oral taxon
386 str. F0131]
Length = 218
Score = 70.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 10/172 (5%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
L+ + +DK L I CN+ I + + + + K
Sbjct: 48 SKEELENLFIEKAKSAIDKGADKLL-INCNSLSCAIDYKKIEELIKLEIITPLETYKSLP 106
Query: 116 AYTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
+ I+I+ YT +I + V +M + +E +I E
Sbjct: 107 KGCNN--IAIIGANGL--SAYTIDKIIKESDETKNTISVGNMSIVQMIEAGFTPKEIVEG 162
Query: 175 EIKKEIEGCFIEKE--GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
+ + D I+L CTH+P I ++ + + +D ++
Sbjct: 163 LNLDGFLNYLENIKIGKYKVDSIILGCTHFPYIRDELKKRT--SLIIIDPAE 212
>gi|28210162|ref|NP_781106.1| putative glutamate racemase [Clostridium tetani E88]
gi|28202598|gb|AAO35043.1| putative glutamate racemase [Clostridium tetani E88]
Length = 212
Score = 70.4 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 68/176 (38%), Gaps = 13/176 (7%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAF-TLIKDELRSTFPSMAFLGAVPAIKQAA 115
L++ ++ + + + + I CN+ + D+L+ + + + P
Sbjct: 47 PDRLREMVIEKIKE-IKREKIKNIYIHCNSLSGAVDMDKLKEEY-EINII--TPLQIYRE 102
Query: 116 AYTQSGLISILSTPATLRRTY-TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
Q I +L+ A + T+ I + ++ + + L + +E+ I ED
Sbjct: 103 MANQFDTIGVLA--ANNQSTFGIERTIQEVNPKAYVIGIGILPLVNAIEKSLPVKDIVED 160
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
++ FI+ + I+L CTH+P + + + +D + + ++
Sbjct: 161 FALEKTIEFFIK---NNCEAIILGCTHFPYLYKELQAK--SFIKIIDPAMEMIKKL 211
>gi|91782822|ref|YP_558028.1| aspartate racemase [Burkholderia xenovorans LB400]
gi|91686776|gb|ABE29976.1| Aspartate racemase [Burkholderia xenovorans LB400]
Length = 518
Score = 69.6 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 8/176 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122
++ L+ L I CNTA + + ++ + + + + T GL
Sbjct: 301 ALYAACRTLEDGGADLIAIPCNTAHAFV-ERIQPSL-GIPIVNMLTCTADYLRETFPGLR 358
Query: 123 -ISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRV-EEYACGIKIKEDEIKKE 179
I +L+T TL + + Q + L V E + +
Sbjct: 359 EIGVLATTGTLASRVYEQSLEARGFVQIVPGEQAQARLMHAVYGPKGAKAGFTSGECRDD 418
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIV--HVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + + VIVL CT PL++ + V +D ++ +A+R
Sbjct: 419 LAAAVDDLIAQGVQVIVLGCTELPLLLRDAALACAAGRVVRLVDPTEVLAKRCVAY 474
>gi|259046771|ref|ZP_05737172.1| glutamate racemase [Granulicatella adiacens ATCC 49175]
gi|259036539|gb|EEW37794.1| glutamate racemase [Granulicatella adiacens ATCC 49175]
Length = 223
Score = 69.6 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114
ED ++ + + + + K + CN+ +++ D L+ + +P I
Sbjct: 47 EDEEREQYIRNVINGL--KNDIDAVFVYCNSLSSVVNFDSLQEEYR-------LPMITPM 97
Query: 115 AAYTQSGL----ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
Y G+ +++++ + +NL + + V+ + L +E K
Sbjct: 98 QMYRTLGVEHDYLAVMAANSHGLTGVENNLYIA-NPNLKVFGVTMLELVKAIETG----K 152
Query: 171 IKEDEIKKE-IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+E+ IK+ + F E + +VL CTH+P + QL + +D + R
Sbjct: 153 PEEEIIKQFDFQSLFHYFESTEIEAVVLGCTHFPYVKSELEQL--SNIPIIDVGVYMIDR 210
Query: 230 ARCLLPRIN 238
+ + N
Sbjct: 211 LKSHIQEEN 219
>gi|330904118|gb|EGH34690.1| glutamate racemase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 44
Score = 69.6 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVAD 46
+ IFDSG+GGL VL ++R L+P +Y+AD
Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLAD 44
>gi|312796799|ref|YP_004029721.1| aspartate racemase [Burkholderia rhizoxinica HKI 454]
gi|312168574|emb|CBW75577.1| Aspartate racemase (EC 5.1.1.13) [Burkholderia rhizoxinica HKI 454]
Length = 253
Score = 69.2 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 42/176 (23%)
Query: 72 LDKYQPVLSVIACNTA------FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
L + IACNTA F + F+ + A + A + +G +
Sbjct: 78 LARAGCGAVAIACNTAHYWCDEFAAALR--------IPFIDMISATARQTALSGAGSAIV 129
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE--------EYACGIKIKEDEIK 177
L T +T+R + + + +HL+ VE A + ++
Sbjct: 130 LGTRSTIRYRLYDHAL----NDAGVHLIEPDD--EIVELTSAAISLSKAGDLPGASAQLA 183
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHV-FRQLSPWPVDWLDN----SDSIAR 228
+ + C D ++L CT P++V R + +D+ +++ +
Sbjct: 184 RSLAAC----GALHADAVILGCTELPMVVPAGIR-----GIHLIDSVSCLAEACVQ 230
>gi|238023769|ref|YP_002908001.1| Aspartate racemase [Burkholderia glumae BGR1]
gi|237878434|gb|ACR30766.1| Aspartate racemase [Burkholderia glumae BGR1]
Length = 509
Score = 68.8 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 75/207 (36%), Gaps = 18/207 (8%)
Query: 29 LQKMRFLMPEYHFIYVAD-DVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
L+ + P+ D G+ D + ++ L++ L I CNTA
Sbjct: 293 LKVLVEQNPQIP-----DRTAHL-IGDGPDPTV---SLYAACKRLEQGGADLVAIPCNTA 343
Query: 88 FTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS-- 143
++ + + V A + + + +L+T TL + + +
Sbjct: 344 HAFVERI--QPHLGIPIINMLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAEG 401
Query: 144 YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP 203
+ Q + + ++A+ ++ E +++I V++L CT P
Sbjct: 402 FAQQVPPPALQARVMAAIYGKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELP 461
Query: 204 LIVHVFRQLSPWPVD--WLDNSDSIAR 228
L++ + ++P +D ++ +A+
Sbjct: 462 LLLPMADYVAPDGAHAVLVDPTEVLAK 488
>gi|260583752|ref|ZP_05851500.1| glutamate racemase [Granulicatella elegans ATCC 700633]
gi|260158378|gb|EEW93446.1| glutamate racemase [Granulicatella elegans ATCC 700633]
Length = 215
Score = 68.8 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 12/180 (6%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114
+ ++ KY + CN+ +++ D+L + + A
Sbjct: 47 SSEYRMAFMREKVEELRAKY--DAIFVYCNSLSSVVDFDQLSQEYEMPMITPMQMYRQLA 104
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
Y Q +++++ + +NL + + ++ + L +E +I
Sbjct: 105 MDYQQ---VAVMAANSHGLMGVENNLYKA-NPSLQVIGITLLELVKSIEANLSPKEIA-- 158
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
IK + F G + ++L CTH+P I L+ + +D + + R + L
Sbjct: 159 -IKFDFSSLFTFFNGSNVEAVILGCTHFPYIKEELESLT--KLPIIDVGEYMVRTLKEKL 215
>gi|317404913|gb|EFV85281.1| aspartate racemase [Achromobacter xylosoxidans C54]
Length = 247
Score = 68.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 34/177 (19%)
Query: 70 DILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLI 123
L++ L I CNTA + LR L + A+ Q G I
Sbjct: 74 RFLERAGAQLIAIPCNTAHLWYDDIAAATLR------PVLHIIQAVIDDLRRLGLQQGRI 127
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKEIE 181
++ T ATL+ + + +C + VE Y +K ++++
Sbjct: 128 GLMGTAATLKLGLYQRHLEAQGYECIV------PDDDEVERYCMASIRAVKGNQLEAAFA 181
Query: 182 G---CFIEKEGKRTDVIVLACTHYPL-----IVHVFRQLSPWPVDWLDNSDSIARRA 230
C + + D +VL CT PL + + D+ D++AR A
Sbjct: 182 PAADCIARLKARGADAVVLGCTELPLAVPHALRPSL------GITLTDSIDALARAA 232
>gi|239932810|ref|ZP_04689763.1| glutamate racemase [Streptomyces ghanaensis ATCC 14672]
Length = 98
Score = 68.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L ++R L P+ + D G P+G L R + + +
Sbjct: 22 IALMDSGIGLLAATAEVRRLRPDADLVLSLDPDGMPWGPRTPEDLTGRALAVAEAA-AAH 80
Query: 76 QPVLSVIACNTAFTLIK 92
+P ++ CNTA
Sbjct: 81 RPDALIVGCNTATVHAL 97
>gi|312143810|ref|YP_003995256.1| Asp/Glu/hydantoin racemase [Halanaerobium sp. 'sapolanicus']
gi|311904461|gb|ADQ14902.1| Asp/Glu/hydantoin racemase [Halanaerobium sp. 'sapolanicus']
Length = 220
Score = 68.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 55/155 (35%), Gaps = 8/155 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K + +I CN+ +++ + S + L + A+ + + ++IL+ +
Sbjct: 63 LKKAGANIIIIYCNSLSAVLEVDKISALTDIPILTPL-AVYKNLDLSSLDKLAILA-ANS 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
N+I M + + +E +I + ++ +
Sbjct: 121 QSAAKIENIIAEKNPHLEFVSAGIMPIINAIEAQKDPTEI---LAEAGLQELLVAFRTMG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
D ++L CTH P + + +D +D I
Sbjct: 178 ADTLLLGCTHLPYLKEEIKGFYEN---IIDPADKI 209
>gi|295681452|ref|YP_003610026.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295441347|gb|ADG20515.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 488
Score = 68.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 17/186 (9%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+ D + ++ L+ L I CNTA ++ + + + +
Sbjct: 301 GDGPDPTI---SLYATCKKLETGGADLIAIPCNTAHAFVERI--QPYLGVPIVNMLTVTV 355
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI- 169
+ + + +L+T TL + S + +V + L +RV + G
Sbjct: 356 RYLRESFPALRSVGVLATSGTLASGVYQKALESQGLR---QVVPAPALQARVMDAIYGKA 412
Query: 170 ----KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNS 223
+ ++++ + +VIVL CT PL+ + V +D +
Sbjct: 413 GVKAGFTAGQCQQDLAAAIDGLIAEGVEVIVLGCTELPLLLREPYVIGANGARVSIVDPT 472
Query: 224 DSIARR 229
D +A++
Sbjct: 473 DVLAKQ 478
>gi|194291994|ref|YP_002007901.1| aspartate/glutamate/hydantoin racemase [Cupriavidus taiwanensis LMG
19424]
gi|193225898|emb|CAQ71845.1| putative aspartate/glutamate/hydantoin racemase [Cupriavidus
taiwanensis LMG 19424]
Length = 3569
Score = 67.7 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 83/266 (31%), Gaps = 31/266 (11%)
Query: 19 FDSGIGGLIVLQKMRFLM-----PEYHFIYVADDVGFPYGNWEDHALKKRL-MFLFSDIL 72
FDS GGL+ Q + + D YG E L + + +
Sbjct: 1735 FDSSNGGLLAAQNIARHTYAMTGKAVQVVAFTDHAAGTYGGRERGDLVNLVHAGVVAAQK 1794
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K L ACNTA T + L T + + + + + +++TP T+
Sbjct: 1795 AKGAVDL--FACNTACTAFPEALAGTHQAKVVNLIMQTAPRIVTEGGARPV-VVATPGTV 1851
Query: 133 RRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKE-DEIKKEIEGCF-IEKEG 189
+ + + + + A V + +++K + E+
Sbjct: 1852 KLHAYLEAVAEASGGSVTVKEIGATEWADAVNNLMHLADGAKLEQLKGLVAKYINAEQIP 1911
Query: 190 KRTDVIVLACTHYP----LIVHVFRQLSPWPVDWLDNSDSIARRA-----------RCLL 234
+ CTHYP L+ + V +D AR+ R L
Sbjct: 1912 ADATSLWFCCTHYPALETLVRQQLDAIGRSDVRLIDPMQYQARKGVEMLVDQGLIDRSAL 1971
Query: 235 PRINTHQTRVFDDHAL----FLSGKP 256
+ V DD L F +G+P
Sbjct: 1972 LEQPLDPSAVPDDKTLPTIVFTTGQP 1997
>gi|319942626|ref|ZP_08016934.1| hypothetical protein HMPREF9464_02153 [Sutterella wadsworthensis
3_1_45B]
gi|319803805|gb|EFW00737.1| hypothetical protein HMPREF9464_02153 [Sutterella wadsworthensis
3_1_45B]
Length = 479
Score = 66.9 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 19/179 (10%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQSG 121
+F + L+ ++ CNTA L F + F+ A +
Sbjct: 294 ALFHCAQRLEADGCSTLIVPCNTAHAF-LPYL-ERFIKIPFINMQQAALDEIQNKLGTRA 351
Query: 122 LISILSTPATLRRTYTSNLIHSYV------SQCHIHLVSSMILASR-VEEYACGIKIKED 174
I +L+T T++ + ++ H V + I + + +ED
Sbjct: 352 KIGLLATTGTVQTGIYGDKANAMGLPMFVPDDVHQERVMAAIYGPQGAKAGYTNGICRED 411
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV---FRQLSPWPVDWLDNSDSIARRA 230
I ++ G ++L CT PLI+ F +++ V +D + ++AR+
Sbjct: 412 LISA--AEYLVKTHGCN--CLILGCTELPLILDESDDF-EVAGSRVIVVDPTAALARKV 465
>gi|329767103|ref|ZP_08258631.1| hypothetical protein HMPREF0428_00328 [Gemella haemolysans M341]
gi|328837828|gb|EGF87453.1| hypothetical protein HMPREF0428_00328 [Gemella haemolysans M341]
Length = 217
Score = 66.9 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 10/166 (6%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAA 115
+ ++ ++ D L + + CN+ ++ D L M P
Sbjct: 47 EDEERENIIVKIIDELKEKDCGAIFVYCNSLSSVADFDRLAEK---MNISIITPMQMYRN 103
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +++++ + +NL S + + +S + L +EE +I ED
Sbjct: 104 LGLEYKYLAVMAANSHGLTGVENNLYVS-NPRLRVLGLSMLELVKAIEEGNKPEQIVEDF 162
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
K + F E + +VL CTH+P I +++ + +D
Sbjct: 163 NFKTLFNYF---ELTNVEAVVLGCTHFPYIKKELEKIT--KLPIID 203
>gi|256545541|ref|ZP_05472901.1| aspartate racemase [Anaerococcus vaginalis ATCC 51170]
gi|256398752|gb|EEU12369.1| aspartate racemase [Anaerococcus vaginalis ATCC 51170]
Length = 238
Score = 66.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-AYTQSGLISILSTPA 130
+DK P VI CNTA D+L+ + + ++ + I I +T
Sbjct: 72 VDKLNPDFYVITCNTA-HFFYDDLQ-KLTKKPIINMIELVENKLNKIKKPSTIGIFATEG 129
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGCFIEKEG 189
T++ +N+I + + SS + + E G ++ I + E
Sbjct: 130 TIKSKLFNNIIERCSHKAFV---SSRKIQDNINECLYGDVKEKGTINFERYHNTLKEMMD 186
Query: 190 KRTDVIVLACT 200
+ D I++ CT
Sbjct: 187 QGCDYIIIGCT 197
>gi|241889778|ref|ZP_04777076.1| putative glutamate racemase [Gemella haemolysans ATCC 10379]
gi|241863400|gb|EER67784.1| putative glutamate racemase [Gemella haemolysans ATCC 10379]
Length = 219
Score = 66.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 63/166 (37%), Gaps = 10/166 (6%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAA 115
+ ++ ++ D L + + CN+ +++ D L M P
Sbjct: 47 EDEERENIIVKIIDELKEKDCYAIFVYCNSLSSVVDFDRLAEK---MNISIITPMQMYRN 103
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +++++ + +NL S + + +S + L +EE +I ED
Sbjct: 104 LGFEYKYLAVMAANSHGLTGVENNLYVS-NPRLRVLGLSMLELVKAIEEGNKPEQILEDF 162
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
K + F E + +VL CTH+P I +++ + +D
Sbjct: 163 NFKTLFNYF---ELTNVEAVVLGCTHFPYIKQELEKIT--NLHIID 203
>gi|302390707|ref|YP_003826528.1| Asp/Glu/hydantoin racemase [Thermosediminibacter oceani DSM 16646]
gi|302201335|gb|ADL08905.1| Asp/Glu/hydantoin racemase [Thermosediminibacter oceani DSM 16646]
Length = 219
Score = 66.1 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 20/177 (11%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAA 116
AL ++++ + D K +I CN+ I + ++ ++ P
Sbjct: 53 DALTRKVIAIIGDF-QKLDIKNVMIYCNSLSAAIDLELVKHECSAVNI--VTPLQVYRNL 109
Query: 117 YTQSGLISILSTPA----TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
++ + + + T+ + N I VS + + +E I
Sbjct: 110 ASRYRRLVVWAANGRCLQTIEKILYEN-----NPAIQIIGVSLLPVIVAIENLERPETI- 163
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+KK + +G + +VL CTH P + ++ PV +D ++ + R
Sbjct: 164 ---VKKFDLADLV-FKGFNPEGLVLGCTHLPYLKEKLEEIFSAPV--IDPAEEMLRD 214
>gi|296159354|ref|ZP_06842179.1| aspartate racemase [Burkholderia sp. Ch1-1]
gi|295890338|gb|EFG70131.1| aspartate racemase [Burkholderia sp. Ch1-1]
Length = 503
Score = 66.1 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 60/176 (34%), Gaps = 8/176 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122
++ L+ L I CNTA + + ++ + + + + T GL
Sbjct: 301 ALYAACRTLEDGGADLIAIPCNTAHAFV-ERIQPSL-GIPIVNMLTCTADYLRETFPGLR 358
Query: 123 -ISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRV-EEYACGIKIKEDEIKKE 179
+ +L+T TL + + Q + L V E +
Sbjct: 359 EVGVLATTGTLASRVYEQSLEARGFVQIAPGEQAQARLMHAVYGPKGAKAGFTSGECCDD 418
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIV--HVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + + VIVL CT PL++ + + V +D ++ +A+R
Sbjct: 419 LAAAVDDLIAQGVQVIVLGCTELPLLLRDAMLACAAGRVVRLVDPTEVLAKRCVAY 474
>gi|293605594|ref|ZP_06687974.1| aspartate racemase [Achromobacter piechaudii ATCC 43553]
gi|292815974|gb|EFF75075.1| aspartate racemase [Achromobacter piechaudii ATCC 43553]
Length = 247
Score = 66.1 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 60/169 (35%), Gaps = 18/169 (10%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILS 127
L++ L I CNTA L ++ + + L + A+ G I ++
Sbjct: 74 RFLEQAGAQLIAIPCNTA-HLWYHDI-AAATGVPVLHIIQAVIDDLRRLGLPKGRIGLMG 131
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-----EDEIKKEIEG 182
T ATL+ + + +C + VE Y G +E
Sbjct: 132 TAATLKLGLYQKHLLAQGYECIV------PDDDEVERYCMGSIRAVKGNRLEEAFAPAAE 185
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVH-VFRQLSPWPVDWLDNSDSIARRA 230
C + + D +VL CT PL V R V D+ D++AR A
Sbjct: 186 CISRLKARGADAVVLGCTELPLAVPHALRASLG--VTLTDSIDALARAA 232
>gi|91787877|ref|YP_548829.1| aspartate racemase [Polaromonas sp. JS666]
gi|91697102|gb|ABE43931.1| Aspartate racemase [Polaromonas sp. JS666]
Length = 251
Score = 65.7 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 46/138 (33%), Gaps = 19/138 (13%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +ACNTA EL+ FP + L + QA A + +L+T T
Sbjct: 87 LAALGASTVAVACNTAHAW-HAELQERFPQLEVLHVAREVAQALASRGVREVGLLATEGT 145
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-------CGIKIKEDEIKKEIEGCF 184
R + QCHI EE G+K+ + ++
Sbjct: 146 YRAGLYDQALRQAGLQCHI---------PLAEERERLMDGIYHGVKVGNMALARDCFASV 196
Query: 185 IEKEGK--RTDVIVLACT 200
+ + +VL CT
Sbjct: 197 AQALARRHGLSTLVLGCT 214
>gi|313887691|ref|ZP_07821373.1| XkdX family protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846300|gb|EFR33679.1| XkdX family protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 212
Score = 65.7 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 72/176 (40%), Gaps = 10/176 (5%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQA 114
L + + D K + + CN+ I D+L ++ + + K+
Sbjct: 46 SREDLTRLVEEKIVDAKAKGAEKIFIY-CNSLSASIDIDDLSRR-QAIQIITPLDFYKE- 102
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
++ + IL+ A + Y + + + + + L +E+ +I +
Sbjct: 103 -LDSKYKKLIILA--ANSKSAYGVDALVCEKNFRDTISLGILSLVEEIEKKTQPEEIVKK 159
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+++ F + E D I+LACTH+P + F++L+ ++ LD ++ + +R
Sbjct: 160 LDLRDLFNFFNKMEDV-PDGIILACTHFPYMKEEFKKLT--DIEILDPAEDMIKRL 212
>gi|311106491|ref|YP_003979344.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans A8]
gi|310761180|gb|ADP16629.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans A8]
Length = 244
Score = 65.3 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 61/179 (34%), Gaps = 26/179 (14%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSG 121
M L L I CNTA L D++ ++ + L + A+ +G
Sbjct: 68 YMQEGVRFLQDAGARLIAIPCNTA-HLWYDQIAAS-TGVPVLHIIQAVIDDLRRLGLSAG 125
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-----EDEI 176
I ++ T ATL+ + + QC + VE Y G ++
Sbjct: 126 RIGLMGTAATLKLGLYQQHLEAQGYQCIV------PDDDEVERYCMGSIRAVKANRLEDA 179
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPL-----IVHVFRQLSPWPVDWLDNSDSIARRA 230
C + + D +VL CT PL + V D+ D++AR A
Sbjct: 180 YAPAAECIARLKARGADAVVLGCTELPLAVPHALRPSL------GVTLTDSIDALARAA 232
>gi|307299539|ref|ZP_07579338.1| aspartate racemase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306914774|gb|EFN45162.1| aspartate racemase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 229
Score = 65.3 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 51/148 (34%), Gaps = 2/148 (1%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + L + +I NT + ++ + + A+ +
Sbjct: 60 IERVLSEAAQDLKRAGADFLIICTNTMHLIAREI--EKASGLEVIEIGIAVGEEIERRGL 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L T T+ R Y + + + + + R+ I ++E K
Sbjct: 118 KTVGLLGTKFTMERAYYRDTLAGFGISVIVPSEEERAVVDRIIFEELCKGIFKEESKSAY 177
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHV 208
+ + + ++L CT PL++
Sbjct: 178 KKIISGLQMNGAEGVILGCTEIPLLIKE 205
>gi|317495332|ref|ZP_07953702.1| hypothetical protein HMPREF0432_00304 [Gemella moribillum M424]
gi|316914754|gb|EFV36230.1| hypothetical protein HMPREF0432_00304 [Gemella moribillum M424]
Length = 215
Score = 65.0 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 16/169 (9%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
D + ++ ++ + + + Q + CN+ +++ F +A + I
Sbjct: 47 DDSEREDIIVEIINKIKEQQCSAIFVYCNSLSSVV------DFDRLAIENEINIITPMQM 100
Query: 117 YTQSGL----ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
Y GL +++++ + +NL S + + +S + L +E+ KI
Sbjct: 101 YRNLGLEYKYLAVMAANSHGLTGVENNLYLS-NPELKVFGLSMLELVKAIEDKNSPHKIV 159
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
D K + F E + + +VL CTH+P I +++ + +D
Sbjct: 160 ADFDFKNLFNYF---EQTKVEAVVLGCTHFPYIKEELEKIT--KLSIID 203
>gi|330808542|ref|YP_004353004.1| bifunctional protein: aspartate racemase; glutamate racemase
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327376650|gb|AEA68000.1| Putative bifunctional protein: aspartate racemase; glutamate
racemase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 486
Score = 65.0 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 65/187 (34%), Gaps = 8/187 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122
M+ L+ I CNTA + + +++ ++ A SG
Sbjct: 299 AMYAACKRLESAGANAIAIPCNTAHAFV-ERIQAHLRVPIVNMLSETVEWIARTYGSGKA 357
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKEI 180
I +L+T T++ Q V + GIK + K+++
Sbjct: 358 IGLLATSGTVQSQVYHQAARQAGLQVLTPGVDYQAMVMDAIYGPRGIKAGFTQGLCKEQL 417
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIV---HVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
V++L CT PL++ F +++ V +D + +A+R L +
Sbjct: 418 LLAAEHLCELGAGVLILGCTELPLVLAHCEAF-EINGHRVALVDPTMILAQRCVALAQKA 476
Query: 238 NTHQTRV 244
+++
Sbjct: 477 PLSGSKL 483
>gi|288930673|ref|YP_003434733.1| aspartate racemase [Ferroglobus placidus DSM 10642]
gi|288892921|gb|ADC64458.1| aspartate racemase [Ferroglobus placidus DSM 10642]
Length = 222
Score = 64.6 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 83/242 (34%), Gaps = 53/242 (21%)
Query: 16 ILIFDSGIGGLI------VLQ----KMRFLMPE----YHFIYVADDVGFPYGNWEDHAL- 60
I I +GGL + + R P+ IY + F +
Sbjct: 2 IGI----VGGLSPEATAYYYRLFIEESRKRFPKYFYPEILIY---SLNF------KEFVE 48
Query: 61 -----KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
+KRL+ LD+ + IA NT + DEL+ S + V A+ + A
Sbjct: 49 GSSEERKRLLVKALKKLDEAGVKVGGIASNTP-HMFFDELKKAV-SFELVSIVEAVAEKA 106
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKE 173
G +L T T+ + Y + + + RV EE G K ++
Sbjct: 107 G---KGKFLLLGTKKTMESDFYQRAFEKYGGEIIVPEEEDREVVHRVIMEELVLG-KFEK 162
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D++ + I+ + D +VL CT PL Q V+ D++ +
Sbjct: 163 DKLLEVIKKY-----ERFVDGVVLGCTELPL---AISQK-DLNVELFDSAKI---HVEKM 210
Query: 234 LP 235
L
Sbjct: 211 LE 212
>gi|317121724|ref|YP_004101727.1| aspartate racemase [Thermaerobacter marianensis DSM 12885]
gi|315591704|gb|ADU51000.1| aspartate racemase [Thermaerobacter marianensis DSM 12885]
Length = 296
Score = 64.6 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 60/170 (35%), Gaps = 19/170 (11%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV--------PAIKQAAAYTQSGLI 123
L L +I CNTA + D L++ P + L + P AA G +
Sbjct: 121 LVSLGATLILIPCNTA-HVYFDRLQAESP-VPILHIMREVARALAPGGDPAAGLAAGGPV 178
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE-DEIKKEIEG 182
+L+T T+ + Q + + +R GIK ++ +
Sbjct: 179 GLLATELTVASGLYHRALAEVGLQVLVPEPAYQAQVTRAIFGPDGIKAGVYGPARQRLLE 238
Query: 183 CFIEKEGKRTDVIVLACTHYPL-IVHVFRQLSPW-PVDWLDNSDSIARRA 230
+ V++ CT PL + PV W+D ++ +AR A
Sbjct: 239 AGAHLVERGARVLIAGCTELPLVLRP------GDFPVPWVDPAEILARAA 282
>gi|116492431|ref|YP_804166.1| aspartate racemase [Pediococcus pentosaceus ATCC 25745]
gi|116102581|gb|ABJ67724.1| Aspartate racemase [Pediococcus pentosaceus ATCC 25745]
Length = 235
Score = 63.8 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 5/129 (3%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATL 132
K P VIACNTA D+L+ +K + I I+ TP T
Sbjct: 74 KLNPAFFVIACNTA-HFFYDDLQKATDVPIVHMPRETVKHIKEQYPNAKKIGIIGTPGTT 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILAS-RVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + L S + + + + E+ I +E++G
Sbjct: 133 SDGIYDRELLAEGFEVVKPTKAIQDLTSKLIFDDIKEQNLVDAELFYHILKMMVEEQGA- 191
Query: 192 TDVIVLACT 200
DV++L CT
Sbjct: 192 -DVVILGCT 199
>gi|14520631|ref|NP_126106.1| aspartate racemase [Pyrococcus abyssi GE5]
gi|5457847|emb|CAB49337.1| racD-2 aspartate racemase [Pyrococcus abyssi GE5]
Length = 232
Score = 63.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K+++ + L++ L + NT ++ D+++ ++ + + A+ +
Sbjct: 58 RKKILINAAKALERAGAELIAFSANTP-HIVFDDVQREV-NVPMVSIIDAVAEEVIRRGV 115
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178
+ +L T T+ + + + + +R+ EE A G +D I K
Sbjct: 116 KRVLLLGTKTTMSADFYIKALEKKGLEVVVPNDEEKEELNRIIFEELAFGDLKNKDWIVK 175
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSD 224
IE KE + + ++L CT PL +Q V+ D+++
Sbjct: 176 LIERY---KESENIEGVILGCTELPL---AIKQ--GDVSVEVFDSAE 214
>gi|241896564|ref|ZP_04783860.1| aspartate racemase [Weissella paramesenteroides ATCC 33313]
gi|241870286|gb|EER74037.1| aspartate racemase [Weissella paramesenteroides ATCC 33313]
Length = 241
Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 49/143 (34%), Gaps = 14/143 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPA 130
L+ VI CNTA EL+ F A+K T +S + I++T
Sbjct: 79 LNYLGVSFIVITCNTA-HYFLPELQKQSEVPIFSMPELAVKACKKETNKSIRVGIMATNG 137
Query: 131 TLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ LI V+ ++ S + E + E ++ F E
Sbjct: 138 TISAGIYQKALIGKNVTPVIPDEYQQNLVMSLIYEDIKNRNFVDQEKYYQLIEYFFE--E 195
Query: 190 KRTDVIVLAC---------THYP 203
D I+L C THYP
Sbjct: 196 CECDYIILGCTELSVAQEQTHYP 218
>gi|332157981|ref|YP_004423260.1| aspartate racemase [Pyrococcus sp. NA2]
gi|331033444|gb|AEC51256.1| aspartate racemase [Pyrococcus sp. NA2]
Length = 226
Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 66/171 (38%), Gaps = 21/171 (12%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K+++ + L++ + ++ NT ++ D+++ ++ + + A+ +
Sbjct: 58 RKKILINAAKALERAGADIIAMSANTP-HMVFDDVQKEV-NVPMVSIIDAVAENVKRRGV 115
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKED 174
+ +L T T+ + N + + + ++ +I +
Sbjct: 116 KKVLLLGTKTTMSSDFYINALKERGLEVVVPNDEEKEELNRIIFEELAFHNFKNRGWIIE 175
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSD 224
IKK IE ++ + ++L CT PL +Q V+ D+++
Sbjct: 176 LIKKYIEK-------EKIEGVILGCTELPL---AIKQ--GDVEVEVFDSAE 214
>gi|303257154|ref|ZP_07343168.1| putative aspartate racemase [Burkholderiales bacterium 1_1_47]
gi|302860645|gb|EFL83722.1| putative aspartate racemase [Burkholderiales bacterium 1_1_47]
Length = 484
Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 23/181 (12%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFT---LIKDELRSTFPSMAFLGA--VPAIKQAAAYT 118
++ L+K VIACNTA I L S+ + V + +
Sbjct: 299 SLYAACRKLEKDAVDAIVIACNTAHAYFETIVPHL-----SVPLINMQQVTLEEIRDKFG 353
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKED- 174
+I +++T T+ S + + E+
Sbjct: 354 PDVVIGLMATDGTIETGIYGRKAKSMKLAMVVPDKEHQAMVMEAIYGEKGVKAGFTDGHC 413
Query: 175 -EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV---FRQLSPW-PVDWLDNSDSIARR 229
E+ + + +G + ++L CT PLI+ + +D + S+ARR
Sbjct: 414 KEVLLKAAEHLVRDKGAQ--ALILGCTELPLILEETDNIK--LGDGHAAIVDPTASLARR 469
Query: 230 A 230
Sbjct: 470 V 470
>gi|14591491|ref|NP_143571.1| aspartate racemase [Pyrococcus horikoshii OT3]
gi|209870333|pdb|2ZSK|A Chain A, Crystal Structure Of Ph1733, An Aspartate Racemase
Homologue, From Pyrococcus Horikoshii Ot3
gi|209870334|pdb|2ZSK|B Chain B, Crystal Structure Of Ph1733, An Aspartate Racemase
Homologue, From Pyrococcus Horikoshii Ot3
gi|3258164|dbj|BAA30847.1| 226aa long hypothetical aspartate racemase [Pyrococcus horikoshii
OT3]
Length = 226
Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K+++ + L++ L A NT L+ D+++ ++ + + A+ +
Sbjct: 58 RKKILINAAKALERAGAELIAFAANTP-HLVFDDVQREV-NVPMVSIIDAVAEEILKRGV 115
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178
+ +L T T+ + + + + +R+ EE A G ++ I +
Sbjct: 116 RKVLLLGTKTTMTADFYIKTLEEKGLEVVVPNDEEKEELNRIIFEELAFGNLKNKEWIVR 175
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSD 224
IE +E + + ++L CT PL +Q V+ D+++
Sbjct: 176 LIEKY---RESEGIEGVILGCTELPL---AIKQ--GDVSVEVFDSAE 214
>gi|221633082|ref|YP_002522307.1| aspartate racemase [Thermomicrobium roseum DSM 5159]
gi|221156758|gb|ACM05885.1| aspartate racemase [Thermomicrobium roseum DSM 5159]
Length = 245
Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 9/141 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTP 129
L++ V+ CNTA +R++ S+ L + A + AA ++ +L+TP
Sbjct: 73 LERAGADFIVVPCNTAHAF-LPRVRASI-SIPILSMIAATAERAAAVAPTGSVVGLLATP 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI--KEDEIKKEIEGCFIEK 187
T+ + +C + RV E +K + E+ + +
Sbjct: 131 GTIASRLYQQALAERRLRCIV---PDPQWQERVTEAIALVKAGRTDREVAALVLETGRQL 187
Query: 188 EGKRTDVIVLACTHYPLIVHV 208
++L CT P++ +
Sbjct: 188 IAHGAAALILGCTELPIVFPI 208
>gi|329769721|ref|ZP_08261122.1| hypothetical protein HMPREF0433_00886 [Gemella sanguinis M325]
gi|328838083|gb|EGF87701.1| hypothetical protein HMPREF0433_00886 [Gemella sanguinis M325]
Length = 214
Score = 63.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 62/162 (38%), Gaps = 10/162 (6%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
+++++ + L + + + CN+ +++ D L Y
Sbjct: 51 REKIIVEIIEQLKEKNCEVIFVYCNSLSSVVDFDRLAIEHNIKIVTPMQMYRNLGLEY-- 108
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+++++ + +NL S + +S + L +EE +I +D +
Sbjct: 109 -KYLAVMAANSHGLTGVENNLYVS-NPSLRVLGLSMLELVKAIEEENSPEEIVKDFNFEV 166
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
+ F E + + +VL CTH+P I +++ + +D
Sbjct: 167 LFNYF---EQTKVEAVVLGCTHFPYIKKELEKIT--NLPIID 203
>gi|295676130|ref|YP_003604654.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295435973|gb|ADG15143.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 519
Score = 63.0 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 10/177 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122
++ L++ L I CNTA + + L+ + + + T GL
Sbjct: 316 ALYAACKTLEEGGADLIAIPCNTAHAFV-ERLQPALR-VPIVNMLTCTADYLRETFPGLR 373
Query: 123 -ISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKI--KEDEIKK 178
+ +L+T TL ++ + +Q + L + + G K E
Sbjct: 374 EVGVLATSGTLASRVYEQVLDARGLAQIAPSAAAQARLMNAI-YGPRGAKAGHTSGECCD 432
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNSDSIARRARCL 233
++ + + VIVLACT PL+ V V +D +D +ARR
Sbjct: 433 DLAAAVDDLVAQGVQVIVLACTELPLLLREPVLASPGGRVVRLVDPTDVLARRCVAY 489
>gi|331000797|ref|ZP_08324443.1| aspartate racemase [Parasutterella excrementihominis YIT 11859]
gi|329570325|gb|EGG52058.1| aspartate racemase [Parasutterella excrementihominis YIT 11859]
Length = 484
Score = 63.0 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 23/181 (12%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFT---LIKDELRSTFPSMAFLGA--VPAIKQAAAYT 118
++ L+K VIACNTA I L S+ + V + +
Sbjct: 299 SLYAACRKLEKDAVDAIVIACNTAHAYFETIVPHL-----SVPLINMQQVTLEEIRDRFG 353
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKED- 174
+I +++T T+ S + + E+
Sbjct: 354 PDVVIGLMATDGTIETGIYGRKAKSMKLAMVVPDKEHQAMVMEAIYGEKGVKAGFTDGHC 413
Query: 175 -EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV---FRQLSPW-PVDWLDNSDSIARR 229
E+ + + +G + ++L CT PLI+ + +D + S+ARR
Sbjct: 414 KEVLLKAAEHLVRDKGAQ--ALILGCTELPLILEETDNIK--LGDGHAAIVDPTASLARR 469
Query: 230 A 230
Sbjct: 470 V 470
>gi|56697504|ref|YP_167872.1| aspartate racemase, putative [Ruegeria pomeroyi DSS-3]
gi|56679241|gb|AAV95907.1| aspartate racemase, putative [Ruegeria pomeroyi DSS-3]
Length = 485
Score = 63.0 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 59/174 (33%), Gaps = 20/174 (11%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ--AAAYTQSG 121
++ L++ I CNTA + D ++ + + + + A + + G
Sbjct: 304 ALYATCKKLERAGAQAIAIPCNTAHAFV-DRIQKNL-DIPIISILTETARFIGALHPEIG 361
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKE 179
+++L+T T++ + + + + V G+K +
Sbjct: 362 KVAVLATSGTIQSGLYQSALRDQGLDPVLPDAGMQEMVMEVIYGPSGVKAGFTTGRCAAQ 421
Query: 180 IEGCFIEKEGKRTDVIVLACT-----HYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ G+ +L CT H P +P + +D ++ +AR
Sbjct: 422 LAQVIAAMTGQGAQAAILGCTELPLVHLP---------APAAIRLIDPTEVLAR 466
>gi|251790314|ref|YP_003005035.1| aspartate racemase [Dickeya zeae Ech1591]
gi|247538935|gb|ACT07556.1| aspartate racemase [Dickeya zeae Ech1591]
Length = 252
Score = 63.0 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 73/223 (32%), Gaps = 34/223 (15%)
Query: 6 YPCEKKLQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
+ + I I +GG+ V +QK+ P D P
Sbjct: 9 RSEAENVNPVIGI----LGGMGPGATVDAMQKLIRQTPARK-----DQEHIPVIAVSIPD 59
Query: 60 LKKRLMFLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG 106
+ R + + IL+ +I CNTA ++L+ + +
Sbjct: 60 IPDRTQCILNHSPSPLKKMIEYMRILENAGATCIIIPCNTA-HYWFEDLKQH-TQVDMIS 117
Query: 107 AVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166
+ A Q A + ++IL+T AT+R + + +C + + V
Sbjct: 118 IIEAACQQVAEQRVRHVAILATTATVRSDIYQHALADQQVRC---TLPTNEQQDAVMNSI 174
Query: 167 CGIKIKE-DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
K + + + + + + ++L CT PLI+
Sbjct: 175 YAYKAGDVAQSRALLLPVVASLRQQGVEKMILGCTELPLILET 217
>gi|212697323|ref|ZP_03305451.1| hypothetical protein ANHYDRO_01892 [Anaerococcus hydrogenalis DSM
7454]
gi|212675772|gb|EEB35379.1| hypothetical protein ANHYDRO_01892 [Anaerococcus hydrogenalis DSM
7454]
Length = 238
Score = 63.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 51/148 (34%), Gaps = 8/148 (5%)
Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
+ L +DK P VI CNTA D+L+ + + ++
Sbjct: 56 KSEENPYDFLKEDVES-VDKLNPDFYVITCNTA-HFFYDDLQ-KLTKKPIINMIELVENK 112
Query: 115 A-AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
+ I + +T T++ +++I + LVSS L + +
Sbjct: 113 LNELKKPSTIGLFATEGTIKSRLFTDIIERCGHKA---LVSSKELQENINACLYKDVKES 169
Query: 174 DEIK-KEIEGCFIEKEGKRTDVIVLACT 200
+I K + + D I++ CT
Sbjct: 170 GQINFKRYHKILDKMLEEGADYIIIGCT 197
>gi|306479758|emb|CBV36003.1| glutamate racemase [Helicobacter pylori]
Length = 109
Score = 63.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 13/114 (11%)
Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL------S 213
+EE I E E+ + + +VI+L CTH+PLI
Sbjct: 1 PLIEE-----SILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFAL 55
Query: 214 PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
P P + + D+I + + F SG ++ +
Sbjct: 56 PTPPLLIHSGDAIVEYLQQ--KYALKNNAHAFPKVEFHASGDVIWLEKQAKEWL 107
>gi|332158923|ref|YP_004424202.1| aspartate racemase [Pyrococcus sp. NA2]
gi|331034386|gb|AEC52198.1| aspartate racemase [Pyrococcus sp. NA2]
Length = 228
Score = 62.7 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 5/130 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ V+ CNTA +++R + + + + + + +++T T
Sbjct: 70 LEECGADFIVMPCNTAHAF-IEDIRKSVK-IPVISMIEETAKRVKDEGCKKVGLIATTGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI-KKEIEGCFIEKEGK 190
+ N ++ + S ++ G+K E+ +K + G + E +
Sbjct: 128 IVSKVYHNELNKL--GIEVLTPSEHEQDEVMKGIYQGVKAGNLELGRKILLGIAKKLEER 185
Query: 191 RTDVIVLACT 200
D I+ CT
Sbjct: 186 GADCIIAGCT 195
>gi|115360958|ref|YP_778095.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115286286|gb|ABI91761.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 484
Score = 62.7 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 14/175 (8%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120
++ L+ + I CNTA ++ + + + + T
Sbjct: 305 ISLYATCKKLEDGDADIIAIPCNTAHAFVERI--QPWLRIPIVNMLSVTVAHLRDTYPAL 362
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-----IKEDE 175
+ +L+T T+ + S + + + L +RV E G + +
Sbjct: 363 QEVGVLATSGTIESGVYRKALESQGLR---QVAPAPALQARVMEAIYGAQGVKAGFTTGQ 419
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIAR 228
+++I + VIVL CT P+++ + +D +D +AR
Sbjct: 420 CEEDIGAAIDALMDEGVSVIVLGCTELPILLPGDEYVGRNGRRATLVDPTDVLAR 474
>gi|296129577|ref|YP_003636827.1| aspartate racemase [Cellulomonas flavigena DSM 20109]
gi|296021392|gb|ADG74628.1| aspartate racemase [Cellulomonas flavigena DSM 20109]
Length = 244
Score = 62.7 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+M + L++ V+ CNTA DE+ + + + AA +
Sbjct: 74 VMAADARRLERLGVGFVVVPCNTA-HHFTDEVAAAVDVPVLSIVDETVDEVAARPGVARV 132
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEG 182
+L+T TL I + + + + + + + + + +
Sbjct: 133 GVLATSGTLAARVYQRAIEARGLEAVVPDDADQDVVMGIIYDQVKAGRPADVAALHAVAD 192
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
E+ DV+VL CT ++ +L ++D+ D +ARR
Sbjct: 193 RLRER---GADVVVLGCTELSVVAAE-HRLL-DDARYVDSLDVLARRT 235
>gi|164686387|ref|ZP_02210417.1| hypothetical protein CLOBAR_02825 [Clostridium bartlettii DSM
16795]
gi|164601989|gb|EDQ95454.1| hypothetical protein CLOBAR_02825 [Clostridium bartlettii DSM
16795]
Length = 233
Score = 62.7 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 60/161 (37%), Gaps = 11/161 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+++ VI CNTA D++ + ++ L V + A + + I++T
Sbjct: 73 LEQFGVDFIVITCNTA-HYFYDKINESV-NIPVLSIVEETVKYAKESGHKKLGIMATTGN 130
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
++ + + + + + ++ G ++ K + +
Sbjct: 131 IKTELYQTMCKKFDMEYFVLDDERQQQVMEIIYDDIKSGKPADMNKFNKLVN----HLKE 186
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
D IVL CT ++ + + ++D+ + +AR+
Sbjct: 187 NECDGIVLGCTELSILKND--NNLGNDL-YIDSLEVLARQT 224
>gi|172065222|ref|YP_001815934.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171997464|gb|ACB68381.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 489
Score = 62.7 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 14/175 (8%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120
++ L+ + I CNTA ++ + + + + T
Sbjct: 305 ISLYATCKKLEDGDADVIAIPCNTAHAFVERI--QPWLGIPIVNMLSVTVAHLRDTYPAL 362
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-----IKEDE 175
+ +L+T T+ + S + + + L +RV E G +
Sbjct: 363 REVGVLATSGTVESGVYRKALESQGLR---QVAPAPALQARVMEAIYGPQGVKAGFTTGR 419
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIAR 228
+++I + VIVL CT P+++ ++ +D +D +AR
Sbjct: 420 CEEDIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVARNGRRATLVDPTDVLAR 474
>gi|210621999|ref|ZP_03292942.1| hypothetical protein CLOHIR_00888 [Clostridium hiranonis DSM 13275]
gi|210154444|gb|EEA85450.1| hypothetical protein CLOHIR_00888 [Clostridium hiranonis DSM 13275]
Length = 215
Score = 62.3 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 59/168 (35%), Gaps = 8/168 (4%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
K+ M + + + + CN+ + + E S ++ + + A K+ A
Sbjct: 47 PQETKELEMKKIINKIKECGIKKIFVYCNSLSSAVDMEKLSKEENIVIVTPMDAYKKIAV 106
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
S + + + I C++ + + + VE I D
Sbjct: 107 DYNS--VGVFA-ANNQGLAGIERTIVEKNKNCNVIGIGILPVVLDVEAKKQAQDIIAD-- 161
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
++ E + + I+L CTH+P ++ + ++ ++ S+
Sbjct: 162 -NHLDLAVEFFEKNKVEAIILGCTHFPYFEKELKKCT--ELEIINPSE 206
>gi|71083965|ref|YP_266685.1| aspartate racemase [Candidatus Pelagibacter ubique HTCC1062]
gi|71063078|gb|AAZ22081.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1062]
Length = 248
Score = 62.3 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTP 129
L+K VI CNTA ++LR + + I+ + ++ I +L+T
Sbjct: 84 LEKSGCKFIVIPCNTA-HYWYEDLRKKIK-IPIINMPKEVFIQTKKSCKKNSKIGLLATE 141
Query: 130 ATLRRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACG-IKIKEDEIKKEIEGCFIEK 187
TL+ + YV + + + + ++ G IK+ E IK I+ I++
Sbjct: 142 GTLKTEIYDKIFKKDYVLIKPLSNLQTSSVNKTIKHVKMGNIKLAEKTIKPAIK-YLIKQ 200
Query: 188 EGKRTDVIVLACT 200
+ K+ +L CT
Sbjct: 201 KCKKI---ILGCT 210
>gi|228919689|ref|ZP_04083051.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228840043|gb|EEM85322.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 80
Score = 62.3 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 18/63 (28%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + V + +++ A +L + H F +G Q
Sbjct: 1 MIKSELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVLSFEHIAEQWL 60
Query: 268 GLK 270
G +
Sbjct: 61 GYQ 63
>gi|171315873|ref|ZP_02905103.1| aspartate racemase [Burkholderia ambifaria MEX-5]
gi|171098969|gb|EDT43757.1| aspartate racemase [Burkholderia ambifaria MEX-5]
Length = 500
Score = 61.9 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 14/175 (8%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120
++ L+ + I CNTA ++ + + + + T
Sbjct: 306 ISLYATCKKLEDGDADVIAIPCNTAHAFVEWI--QPWLGIPIINMLTVTVAHLRDTYPAL 363
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI-----KIKEDE 175
+ +L+T T++ + S + + + L +RV E G
Sbjct: 364 RQVGVLATSGTIQSGVYQKALESQGLR---QVAPAPALQARVMEAIYGTHGVKAGFTTGR 420
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIAR 228
+++I + VIVL CT P+++ ++ +D +D +AR
Sbjct: 421 CEEDIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVARNGRRATLVDPTDVLAR 475
>gi|118476501|ref|YP_893652.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam]
gi|196046990|ref|ZP_03114210.1| glutamate racemase [Bacillus cereus 03BB108]
gi|225862818|ref|YP_002748196.1| glutamate racemase [Bacillus cereus 03BB102]
gi|229183175|ref|ZP_04310405.1| Glutamate racemase [Bacillus cereus BGSC 6E1]
gi|118415726|gb|ABK84145.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam]
gi|196022219|gb|EDX60906.1| glutamate racemase [Bacillus cereus 03BB108]
gi|225789735|gb|ACO29952.1| glutamate racemase [Bacillus cereus 03BB102]
gi|228600314|gb|EEK57904.1| Glutamate racemase [Bacillus cereus BGSC 6E1]
Length = 80
Score = 61.9 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 19/63 (30%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ ++ V + +++ A +L + H F +G +
Sbjct: 1 MIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSALSFEHIAERWL 60
Query: 268 GLK 270
G +
Sbjct: 61 GYQ 63
>gi|309807430|ref|ZP_07701393.1| glutamate racemase family protein [Lactobacillus iners LactinV
01V1-a]
gi|308169352|gb|EFO71407.1| glutamate racemase family protein [Lactobacillus iners LactinV
01V1-a]
Length = 78
Score = 61.5 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 104 FLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV 162
+G + A+ TQ+ +++++T AT+ I +Q + + LA V
Sbjct: 3 IIGVIQSGALAASKITQTNQVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLV 62
Query: 163 EEYACG 168
E
Sbjct: 63 EANPSD 68
>gi|170699320|ref|ZP_02890368.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170135750|gb|EDT04030.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 490
Score = 61.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 58/175 (33%), Gaps = 14/175 (8%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120
++ L+ + I CNTA ++ + + + + T
Sbjct: 306 ISLYATCKKLEDGDADVIAIPCNTAHAFVERI--QPWLGIPIVNMLTVTVAHLRDTYPAL 363
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI-----KIKEDE 175
+ +L+T T+ + S + + + L +RV E G
Sbjct: 364 REVGVLATSGTIESGVYRKALESQGLR---QVAPAPALQARVMEAIYGSHGVKAGFTTGR 420
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIAR 228
+++I + VIVL CT P+++ + +D +D +AR
Sbjct: 421 CEEDIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVGRNGRRATLVDPTDVLAR 475
>gi|301052505|ref|YP_003790716.1| glutamate racemase [Bacillus anthracis CI]
gi|300374674|gb|ADK03578.1| glutamate racemase [Bacillus cereus biovar anthracis str. CI]
Length = 80
Score = 61.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 18/62 (29%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ ++ V + +++ A +L + H F +G +
Sbjct: 1 MIKRELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSALSFEHIAERWL 60
Query: 268 GL 269
G
Sbjct: 61 GY 62
>gi|240103413|ref|YP_002959722.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3]
gi|239910967|gb|ACS33858.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3]
Length = 226
Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 66/168 (39%), Gaps = 15/168 (8%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K+++ + L++ + + NT ++ +++ S+ + + A+ +
Sbjct: 58 RKKILINAAKALERAGAEIIALTANTP-HIVFPDVQKAV-SVPMVSIIDALIEEMKRRGV 115
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178
+ +L T T+ + + ++ + + + +R+ EE A + +
Sbjct: 116 RKVLLLGTKTTMTAGFYKDALNRAGFEAVVPGREEIEEVNRIIFEELAFENFKNKPYLLS 175
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSD 224
+E ++ + + ++L CT PL R P V+ D ++
Sbjct: 176 LVEKY---RKERGIEGVILGCTELPL---AIR---PDDVSVEVFDTAE 214
>gi|33597484|ref|NP_885127.1| putative aspartate racemase [Bordetella parapertussis 12822]
gi|33601880|ref|NP_889440.1| putative aspartate racemase [Bordetella bronchiseptica RB50]
gi|33573912|emb|CAE38228.1| putative aspartate racemase [Bordetella parapertussis]
gi|33576317|emb|CAE33396.1| putative aspartate racemase [Bordetella bronchiseptica RB50]
Length = 247
Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 53/176 (30%), Gaps = 26/176 (14%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSG 121
M L + L I CNTA + E + L + A+ Q G
Sbjct: 68 AMIAGMRFLREAGARLIAIPCNTA--HLWYEPLAAVAGCTVLHIIEAVAQDLRRQGLHGG 125
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-----EDEI 176
I ++ T ATL + C I VE Y G D
Sbjct: 126 RIGLMGTSATLALGLYQQTLQRQGYSCIIPE------PDEVERYCMGSIRAVKANRLDLA 179
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPL-----IVHVFRQLSPWPVDWLDNSDSIA 227
+ C + + D +VL CT PL + + D+ D++A
Sbjct: 180 YEPAAECIARLKARGADAVVLGCTELPLAVPHALRP------GLGIRLTDSIDALA 229
>gi|300813990|ref|ZP_07094283.1| Asp/Glu/Hydantoin racemase [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511884|gb|EFK39091.1| Asp/Glu/Hydantoin racemase [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 217
Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 56/151 (37%), Gaps = 8/151 (5%)
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS 143
CN+ + +++ + P + I IL+ A Y + I S
Sbjct: 73 CNSLSAAL--DVKRLSKELDIQIICPFDVYENLDEKYKNIFILAANALA--AYKEDEILS 128
Query: 144 YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF--IEKEGKRTDVIVLACTH 201
+I + ++ + +E +I E K + I+ E + I+L CTH
Sbjct: 129 KTFHRNIISMGNLSIVENIEVDTPAEEIIEKLNLKGLMNYINNIKDEKYKIQAIILGCTH 188
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+P + ++ + +D +D + + + +
Sbjct: 189 FPYLKDELKKYT--SIDIIDPATEMIKLLKN 217
>gi|317484334|ref|ZP_07943255.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
gi|316924412|gb|EFV45577.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
Length = 250
Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 13/159 (8%)
Query: 84 CNTAFT-----LIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLRRTY 136
CNTA + ++L +T + F+ + A+ + + + ILST ATL
Sbjct: 87 CNTAHSPRILDAALEKLNATGRPVRFVHMIDAVVRHVRQRCGEGARVGILSTLATLETRL 146
Query: 137 TSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEGKRTD 193
+ + + H + + GIK + ++ E + D
Sbjct: 147 YQDSLERAGLEALHPAPDGCARVQEAISNREYGIKARNPVTERARADLLDEARRLAGNAD 206
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
I+L CT PL + + V +D +D +AR
Sbjct: 207 AIILGCTEIPLALPE--KELG-GVPLIDATDVLARELVR 242
>gi|325848987|ref|ZP_08170497.1| aspartate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480631|gb|EGC83693.1| aspartate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 238
Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 8/148 (5%)
Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
L +DK P VI CNTA ++L+ + + ++
Sbjct: 56 KSKENPYDFLKEDVES-VDKLDPDFYVITCNTA-HFFYEDLK-KLTKKPIINMIELVENK 112
Query: 115 A-AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
+ I + +T T++ +++I + LVSS L + + +
Sbjct: 113 LNELKKPSTIGLFATEGTIKSRLFTDIIERCGHKA---LVSSKELQENINDCLYKDVKES 169
Query: 174 DEIK-KEIEGCFIEKEGKRTDVIVLACT 200
+I + + + D I++ CT
Sbjct: 170 GQINFERYHKTLDKMLEEGADYIIIGCT 197
>gi|307130300|ref|YP_003882316.1| putative aspartate racemase [Dickeya dadantii 3937]
gi|306527829|gb|ADM97759.1| Probable aspartate racemase [Dickeya dadantii 3937]
Length = 238
Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 53/139 (38%), Gaps = 6/139 (4%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
IL+ +I CNTA ++L+ + + + A Q A + ++IL+T
Sbjct: 69 KILENAGASCIIIPCNTA-HYWFEDLK-RHTQLEMISIIDATCQQVAEQRVRHVAILATT 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE-DEIKKEIEGCFIEKE 188
AT+R + + +C + + V K + + + +
Sbjct: 127 ATVRGEIYQHALAGQQVRC---TLPTDEQQDAVMNSIYAYKAGDVAQARALLLPVVASLR 183
Query: 189 GKRTDVIVLACTHYPLIVH 207
+ + I+L CT PLI+
Sbjct: 184 QRGVEKIILGCTELPLILE 202
>gi|282883367|ref|ZP_06291960.1| racemase [Peptoniphilus lacrimalis 315-B]
gi|281296778|gb|EFA89281.1| racemase [Peptoniphilus lacrimalis 315-B]
Length = 217
Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 63/179 (35%), Gaps = 9/179 (5%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
L+K+ L L + CN+ + +++ + P
Sbjct: 46 SKEILEKKFKNLSRQALSWGAEKFFIY-CNSLSAAL--DVKRLSKELDIQIICPFDVYEN 102
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ I IL+ A Y + I S +I + ++ + +E +I E
Sbjct: 103 LDEKYKNIFILAANALA--AYKEDEILSKTFHRNIISMGNLSIVENIEVDRPAEEIIEKL 160
Query: 176 IKKEIEGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
K + I+ E + I+L CTH+P + ++ + +D +D + + + +
Sbjct: 161 NLKGLMNYINNIKDEKYKIQAIILGCTHFPYLKDELKKYT--SIDIIDPATEMIKLLKN 217
>gi|188586853|ref|YP_001918398.1| Asp/Glu/hydantoin racemase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351540|gb|ACB85810.1| Asp/Glu/hydantoin racemase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 228
Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 62/150 (41%), Gaps = 13/150 (8%)
Query: 80 SVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT- 137
+I CN+ + D+L+ P + + + K+ A Q+ I+++S AT T
Sbjct: 75 VIIYCNSLSASLDLDKLKKLSP-LPIVTPLDIYKEIANDFQT--IALMS--ATNSSNITI 129
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
++ S + S + + ++E+ KI + I+ + + ++L
Sbjct: 130 EKVMRQNNSYITVLGFSLLPVVLQIEKGVAPEKIVHEV---GIKDLLAAISKLKVESLIL 186
Query: 198 ACTHYPLIVHVFRQLS---PWPVDWLDNSD 224
ACTH+P +L + + +D ++
Sbjct: 187 ACTHFPYFKDEVDELISEQGYTFELIDPAE 216
>gi|163856639|ref|YP_001630937.1| putative aspartate racemase [Bordetella petrii DSM 12804]
gi|163260367|emb|CAP42669.1| putative aspartate racemase [Bordetella petrii]
Length = 245
Score = 60.3 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 16/179 (8%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILS 127
L + I CNTA L D+L + P + L + A+ Q G I ++
Sbjct: 73 RFLHAAGARVIAIPCNTA-HLWYDQLCAATP-LPILHIIDAVAQDLRRLGLAHGRIGLMG 130
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY--ACGIKIKEDEIKKEIEGCFI 185
TPATL + + QC + A +E Y A +K ++ +E
Sbjct: 131 TPATLALGLYQTRLERHGYQCIV------PDADEIERYCVAPIRAVKAGDLPAAVEPAMQ 184
Query: 186 ---EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CT PL + ++ + V D+ D++AR A + H+
Sbjct: 185 GVRLLRARGADAVVLGCTELPLAIPHAQRAA-LGVLLTDSIDALARAAIDYWRQTPEHR 242
>gi|271501156|ref|YP_003334181.1| aspartate racemase [Dickeya dadantii Ech586]
gi|270344711|gb|ACZ77476.1| aspartate racemase [Dickeya dadantii Ech586]
Length = 238
Score = 60.3 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 44/222 (19%)
Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
+ I I +GG+ V +QK+ P D P + R
Sbjct: 1 MNPVIGI----LGGMGPGATVDAMQKLIRQTPARK-----DQEHIPMIAVSIPDIPDRTQ 51
Query: 66 FLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
+ + IL+ +I CNTA ++L+ + + + A
Sbjct: 52 CILNHSPSPLKKMIEYMRILENAGATCIIIPCNTA-HYWFEDLK-RHTQVDMISIIDAAC 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
Q A + + IL+T AT+R + + S + L ++ A I
Sbjct: 110 QQVAEQRVHHVGILATTATVRGNIYQHAL----SGQQVRS----TLPDDAQQQAVMNSIY 161
Query: 173 EDEI------KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
+ + + + + I+L CT PLI+
Sbjct: 162 AYKAGDFSQSRALLLPVVDSLRQQGVEKIILGCTELPLILEA 203
>gi|28210540|ref|NP_781484.1| aspartate racemase [Clostridium tetani E88]
gi|28202977|gb|AAO35421.1| aspartate racemase [Clostridium tetani E88]
Length = 231
Score = 60.3 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 49/165 (29%), Gaps = 10/165 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-KQAAAYTQSGLISILSTPA 130
L ++ CNTA DEL +M F+ + + K + +L+T
Sbjct: 71 LKNAGADFLIMPCNTA-HYFYDELYEKL-NMPFINMIEEVGKYIVTKHGKIKVGLLATLG 128
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T + I S + + K+ E K
Sbjct: 129 TYQGKIYERYCKELGLDIIIPSKEVRQKVSDAVYIVKSGQ--RNFTKEFAMDMLKEFNEK 186
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARRAR 231
+ ++L CT PLI +++ + + +R +
Sbjct: 187 DVNAVILGCTELPLIFQPLENDL-KDFEFISSTDILAKETIKRVK 230
>gi|209518824|ref|ZP_03267637.1| aspartate racemase [Burkholderia sp. H160]
gi|209500709|gb|EEA00752.1| aspartate racemase [Burkholderia sp. H160]
Length = 486
Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 64/177 (36%), Gaps = 18/177 (10%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122
++ L+ + I CNTA + + + + + + + GL
Sbjct: 306 SLYATCKKLEDGGADIIAIPCNTAHAFVDRI--QPYLGIPIVNMLTVTVRYLRDSFPGLR 363
Query: 123 -ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS-MILASRVEEYACGIK-----IKEDE 175
+L+T T+ + S +H ++ L +RV + G +
Sbjct: 364 DFGVLATSGTIGSGVYQKALESQG----LHQIAPGAALQARVMDAIYGNNGVKAGFTTGQ 419
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARR 229
+++I + +V++L CT P+++ + V +D ++ +AR+
Sbjct: 420 CQEDIIAAVEGLIAEGVEVVLLGCTELPILLPA-GEFVGRNGGRVQLVDPTEVLARQ 475
>gi|229089909|ref|ZP_04221164.1| Glutamate racemase [Bacillus cereus Rock3-42]
gi|228693534|gb|EEL47240.1| Glutamate racemase [Bacillus cereus Rock3-42]
Length = 80
Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 19/62 (30%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ ++ V + +++ A +L + +H F +G +
Sbjct: 1 MIKKELGEDVTIISSAEETAIELNTMLQHKGILSDNLNPEHRFFTTGSALSFEHIAERWL 60
Query: 268 GL 269
G
Sbjct: 61 GY 62
>gi|218232186|ref|YP_002365636.1| glutamate racemase [Bacillus cereus B4264]
gi|229068519|ref|ZP_04201820.1| Glutamate racemase [Bacillus cereus F65185]
gi|229078168|ref|ZP_04210744.1| Glutamate racemase [Bacillus cereus Rock4-2]
gi|218160143|gb|ACK60135.1| glutamate racemase [Bacillus cereus B4264]
gi|228705138|gb|EEL57548.1| Glutamate racemase [Bacillus cereus Rock4-2]
gi|228714661|gb|EEL66535.1| Glutamate racemase [Bacillus cereus F65185]
Length = 80
Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 18/63 (28%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + V + +++ A +L + H F +G +
Sbjct: 1 MIKSELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVLSFEHIAERWL 60
Query: 268 GLK 270
G +
Sbjct: 61 GYQ 63
>gi|326318025|ref|YP_004235697.1| aspartate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323374861|gb|ADX47130.1| aspartate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 263
Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 54/169 (31%), Gaps = 21/169 (12%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L IACNTA L+ FP ++ L + + +L+T T
Sbjct: 93 LAALGARAVAIACNTAHAW-HRLLQERFPQLSVLHMPREVAALLHAQGRRRVGLLATQGT 151
Query: 132 LRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKED-----EIKKEIEGCFI 185
R + C L + E + E+ + +
Sbjct: 152 YRSGLYRRALEQAGIDCLEPDEAGRERLMQGIYEGVKAGDMALARQCFSEVAQAL----- 206
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARRA 230
++ +VIV+ CT PL + + LD +D++AR A
Sbjct: 207 -RDAGGAEVIVMGCTEIPLALDE----AGAGAALLDPARVLADALAREA 250
>gi|157146318|ref|YP_001453637.1| hypothetical protein CKO_02076 [Citrobacter koseri ATCC BAA-895]
gi|157083523|gb|ABV13201.1| hypothetical protein CKO_02076 [Citrobacter koseri ATCC BAA-895]
Length = 239
Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 24/179 (13%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLI 123
+ L + L++ VIACNTA E + L V A + +
Sbjct: 66 LLLGVEQLNRAGASHIVIACNTA--HHWYEALAQHSDAPLLHIVDATLAVFEGKEKPRRV 123
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI-----LASRVEEYACGIKIKEDEIKK 178
+++T TL + H + S + + G E+
Sbjct: 124 GLIATQGTLDAGWFQ---HGFASMGIESVQPTPEELRQWFVPGCYAVKRGELRTGGELLS 180
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHV---FRQLSPWPVDW-LDNSDSIARRARCL 233
++ +R +VLACT V +++ + +D ++++A++ L
Sbjct: 181 LQAQALRDRGAER---LVLACT------EVPVALAEVTSPHLAVSIDPAEALAQQCARL 230
>gi|34762320|ref|ZP_00143324.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27888042|gb|EAA25105.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 143
Score = 60.0 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y + Q H+ SS L +E A I+ E IK I+ C E + +
Sbjct: 8 QNYIKREVGDSYKQFHVENASS--LIQLIESGAFINNIEETEKTIKNFIDNC--ENKFGK 63
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
D I L+ TH P + F ++ P D +DS+ + +
Sbjct: 64 LDSITLSSTHLPWLSSYFEKIIP-QTKLYDPADSLVKAIK 102
>gi|20808149|ref|NP_623320.1| aspartate racemase [Thermoanaerobacter tengcongensis MB4]
gi|254479423|ref|ZP_05092754.1| aspartate racemase subfamily protein [Carboxydibrachium pacificum
DSM 12653]
gi|20516738|gb|AAM24924.1| Aspartate racemase [Thermoanaerobacter tengcongensis MB4]
gi|214034647|gb|EEB75390.1| aspartate racemase subfamily protein [Carboxydibrachium pacificum
DSM 12653]
Length = 234
Score = 60.0 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 58/189 (30%), Gaps = 26/189 (13%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G L + L K VI CNTA D L+ + + + +
Sbjct: 60 GPDPTPELIA-----TAKNLVKAGADFIVIPCNTA-HYFLDYLKREV-DIPIINMI---E 109
Query: 113 QAAAYTQSG-----LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167
+ A Y ++ + +L+T T++ + + A EE
Sbjct: 110 ETARYVRNNYPYAECVGLLATSGTIKSNLYHKAFKKFGISVLAGDEKKTMEAIYGEEGIK 169
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSD 224
+ E ++ ++ E + VI+ CT + + +D
Sbjct: 170 AGNLGEKP-RRLLKEAAQELIRRGAQVIIAGCT-------EISLVLGEEDVSLPLVDPLT 221
Query: 225 SIARRARCL 233
+A+ A L
Sbjct: 222 ILAKVAVEL 230
>gi|81427712|ref|YP_394710.1| aspartate racemase [Lactobacillus sakei subsp. sakei 23K]
gi|78609352|emb|CAI54398.1| Aspartate racemase [Lactobacillus sakei subsp. sakei 23K]
Length = 238
Score = 60.0 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 5/125 (4%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA-AAYTQSGLISILSTPATLRRT 135
P VIACNTA D+L++ + +K Y + I IL T T+
Sbjct: 81 PAFFVIACNTA-HYFYDDLQAAASAPIVHMPRETVKSIQTTYPDAKRIGILGTKGTVTDG 139
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + + S+ L R + + ++K E + + + D I
Sbjct: 140 IYDEALLAEGYEV---VKPSLDLQERTMDLIFNDIKGQSQMKPEKYHAILAEMQTQCDAI 196
Query: 196 VLACT 200
+L CT
Sbjct: 197 ILGCT 201
>gi|332286031|ref|YP_004417942.1| putative aspartate/glutamate racemase [Pusillimonas sp. T7-7]
gi|330429984|gb|AEC21318.1| putative aspartate/glutamate racemase [Pusillimonas sp. T7-7]
Length = 240
Score = 59.6 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 51/166 (30%), Gaps = 38/166 (22%)
Query: 81 VIA--CNTA-----------FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
VIA CNTA + +RS + G + G I +L
Sbjct: 84 VIAIPCNTAHLWYDKLAASTSLTVLHIVRSVVVDLQRNGI-----------KRGRIGLLG 132
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TL + + +C + L + +L E + D + C
Sbjct: 133 TATTLSSGLYQRELEAQGYEC-VLLEHNDLLRYCAEAIRLVKVNQADAALEPAVQCVQLL 191
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPW------PVDWLDNSDSIA 227
+ D +VL CT P V +D+ D++A
Sbjct: 192 RQQGVDAVVLGCT-------ELALALPAPARPSLGVAVIDSIDALA 230
>gi|332756371|gb|EGJ86722.1| hypothetical protein SF274771_2972 [Shigella flexneri 2747-71]
gi|333016336|gb|EGK35667.1| hypothetical protein SFK304_3259 [Shigella flexneri K-304]
Length = 42
Score = 59.2 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++++ L+P IY D++ PYGN +
Sbjct: 2 TSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKC 42
>gi|226325276|ref|ZP_03800794.1| hypothetical protein COPCOM_03068 [Coprococcus comes ATCC 27758]
gi|225206624|gb|EEG88978.1| hypothetical protein COPCOM_03068 [Coprococcus comes ATCC 27758]
Length = 234
Score = 59.2 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 44/131 (33%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPA 130
L+ I CNT ++++ + +++ + I I+ T
Sbjct: 72 LEMLGVENIAIPCNT-SHYFLEDIQKSTSVPIINMVEESVRYVVEAHPKVKKIGIMGTDG 130
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + + + S + + K + K + + + + +
Sbjct: 131 TMQAKTYHRACEKFGITPVVPGEACQKDVMSLIYDDIKKGKPGD---KNKFDRAYNDLKA 187
Query: 190 KRTDVIVLACT 200
K D ++LACT
Sbjct: 188 KGCDAVILACT 198
>gi|154496370|ref|ZP_02035066.1| hypothetical protein BACCAP_00658 [Bacteroides capillosus ATCC
29799]
gi|150274453|gb|EDN01530.1| hypothetical protein BACCAP_00658 [Bacteroides capillosus ATCC
29799]
Length = 235
Score = 59.2 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 13/134 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ I CNT D L+ +K ++ + IL+T T
Sbjct: 73 LEQVGCTAIAIPCNT-SHFFADRLQGELSIPIIHMVRETVKVLSSDPGVHKVGILATDGT 131
Query: 132 LRRTYTSNLIH-----SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+R ++ + V I+ +++ G + K + + +
Sbjct: 132 VRTGVYQRECEAQGLTAFSPPPEVQKVVMSIIYDEIKKGEKGSREKFAVMDRCLRE---- 187
Query: 187 KEGKRTDVIVLACT 200
D +L CT
Sbjct: 188 ---AGCDAAILGCT 198
>gi|28378236|ref|NP_785128.1| aspartate racemase [Lactobacillus plantarum WCFS1]
gi|300767167|ref|ZP_07077079.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308180386|ref|YP_003924514.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|28271071|emb|CAD63976.1| aspartate racemase [Lactobacillus plantarum WCFS1]
gi|300494986|gb|EFK30142.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308045877|gb|ADN98420.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 248
Score = 59.2 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 10/142 (7%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122
+ +L++ + V+ CNTA L + ++ L AA +Q
Sbjct: 64 SLEADVQLLNQLGVMFIVMTCNTA-HYFIPALTA-LSNVPILNMPALAVTAACRSQQPRP 121
Query: 123 --ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I IL+T TL LI S HI ++ + ++V + D + +
Sbjct: 122 LRIGILATTGTLESQLYQQLIRS---NGHIPVIPNKQQQAQVMTLIYDDIKQRDFVDRVK 178
Query: 181 EGCFIE--KEGKRTDVIVLACT 200
I+ D ++L CT
Sbjct: 179 FHGLIDQLLNAADCDAVILGCT 200
>gi|260582417|ref|ZP_05850209.1| aspartate racemase [Haemophilus influenzae NT127]
gi|260094568|gb|EEW78464.1| aspartate racemase [Haemophilus influenzae NT127]
Length = 230
Score = 58.8 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 22/167 (13%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ +IACNTA DEL+ I + ++ I IL+T AT
Sbjct: 71 LENAGAKCILIACNTA-HYWYDELKEKCHVDMLNIIDSTINEVLQMGKTK-IGILATDAT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK----IKEDEIKKEIEGCFIEK 187
L + Y + ++ E ++ K EI+K E I++
Sbjct: 129 LATKLYQKTLEKY-------GLICLLPNE--EHQKSVMESIYLYKSGEIQKAEELMLIQR 179
Query: 188 EG---KRTDVIVLACTHYPLIVHVFRQLSPWPVDWL-DNSDSIARRA 230
+ +VI+L CT PLI + D++ ++ R A
Sbjct: 180 DELIRHGAEVIILGCTEIPLI---LKNAMREQPTLYEDSTAALVRAA 223
>gi|145631325|ref|ZP_01787097.1| predicted DNA-binding transcriptional regulator [Haemophilus
influenzae R3021]
gi|144983110|gb|EDJ90610.1| predicted DNA-binding transcriptional regulator [Haemophilus
influenzae R3021]
Length = 230
Score = 58.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 22/167 (13%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ +IACNTA DEL+ I + ++ I IL+T AT
Sbjct: 71 LENAGAKCILIACNTA-HYWYDELKEKCHVDMLNIIDSTINEVLQMGKTK-IGILATDAT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK----IKEDEIKKEIEGCFIEK 187
L + Y + ++ E ++ K EI+K E I++
Sbjct: 129 LATKLYQKTLEKY-------GLICLLPNE--EHQKSVMESIYLYKSGEIQKAEELMLIQR 179
Query: 188 EG---KRTDVIVLACTHYPLIVHVFRQLSPWPVDWL-DNSDSIARRA 230
+ +VI+L CT PLI + D++ ++ R A
Sbjct: 180 DELIRHGAEVIILGCTEIPLI---LKNAMREQPTLYEDSTAALVRAA 223
>gi|225572984|ref|ZP_03781739.1| hypothetical protein RUMHYD_01175 [Blautia hydrogenotrophica DSM
10507]
gi|225039635|gb|EEG49881.1| hypothetical protein RUMHYD_01175 [Blautia hydrogenotrophica DSM
10507]
Length = 214
Score = 58.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 14/144 (9%)
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY-TSNLIH 142
CN+ + + E+ S + P + A Q ++S+L+ + I
Sbjct: 73 CNSLSSTVDMEMLSRKLGIKI--VTPLMAYACYAKQYQVLSVLA--GNNQGLAGIERAIL 128
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
C + S + + +E +I E K + F E + +L CTH+
Sbjct: 129 QSNLSCTVVGASLLPMVVEIEAQTLPEQIVE---KFHLMSLFEFFESAGAEAFILGCTHF 185
Query: 203 PLIVHVFRQLSPWPVD--WLDNSD 224
P R++ V LD +D
Sbjct: 186 PY----IRRVLDEKVRIPILDPAD 205
>gi|209520237|ref|ZP_03269006.1| aspartate racemase [Burkholderia sp. H160]
gi|209499312|gb|EDZ99398.1| aspartate racemase [Burkholderia sp. H160]
Length = 512
Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 14/175 (8%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--- 120
++ L+ L I CNTA + + +R P++ A ++
Sbjct: 316 ALYAACKNLEDGGADLIAIPCNTAHAFV-ERIR---PALRVPVVNMPGCTADYLRETFPG 371
Query: 121 -GLISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKI--KEDEI 176
+ +L+T TL + + Q + L + + G K E
Sbjct: 372 LREVGVLATSGTLASRVYEQALDARGFVQVAPSAAAQARLMNAI-YGPHGAKAGHTSGEC 430
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNSDSIARR 229
++ + + VIVLACT PL+ V V +D +D +ARR
Sbjct: 431 CDDLAAAVDDLVAQGVQVIVLACTELPLLLREPVLACPGGRVVRLVDPTDVLARR 485
>gi|146300252|ref|YP_001194843.1| aspartate racemase [Flavobacterium johnsoniae UW101]
gi|146154670|gb|ABQ05524.1| aspartate racemase [Flavobacterium johnsoniae UW101]
Length = 230
Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 7/139 (5%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GL 122
+F + L V+ NT LI D+L+ + + A + A +
Sbjct: 64 LFKGCEFLKSGGAEAIVLCANTM-HLIADKLQEAI-GLPVIHI--AAETAIEIQKQNLKK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T+ + + + + I G I DE KK
Sbjct: 120 VGLLGTKFTMELDFFKDKLKQKGIEAVIPASQEDKDFVHYTIFEELGRGIVTDETKKRYL 179
Query: 182 GCFIEKEGKRTDVIVLACT 200
E + I+L CT
Sbjct: 180 EIADELIKNGAEGIILGCT 198
>gi|228951342|ref|ZP_04113452.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229189055|ref|ZP_04316083.1| Glutamate racemase [Bacillus cereus ATCC 10876]
gi|228594475|gb|EEK52266.1| Glutamate racemase [Bacillus cereus ATCC 10876]
gi|228808395|gb|EEM54904.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 80
Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 18/63 (28%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + V + +++ A +L + H F +G +
Sbjct: 1 MIKSELGEAVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVLSFEHIAERWL 60
Query: 268 GLK 270
G +
Sbjct: 61 GYQ 63
>gi|228941934|ref|ZP_04104478.1| amino-acid racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228974865|ref|ZP_04135427.1| amino-acid racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981458|ref|ZP_04141756.1| amino-acid racemase [Bacillus thuringiensis Bt407]
gi|228778283|gb|EEM26552.1| amino-acid racemase [Bacillus thuringiensis Bt407]
gi|228784869|gb|EEM32886.1| amino-acid racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228817767|gb|EEM63848.1| amino-acid racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326942539|gb|AEA18435.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
Length = 224
Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 52 YGNWEDH-ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA 110
Y + K+ + + L+ + CNTA L +EL+ + S+ L V
Sbjct: 49 YMDRPIDHETMKKAIIEGAQKLESTGVDFIAMPCNTA-HLYFEELQRSL-SIPILNIVDE 106
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
QA + +++L+T AT++ N I I + + + IK
Sbjct: 107 TLQAIPEN-TKKVALLATEATVQAGIYQNGIAKRN----IEYIHHEKWQEMINQIITYIK 161
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
E E +E+ + + D ++ACT
Sbjct: 162 SGEVEEARELWNALVLQLKDEVDTAIIACT 191
>gi|186474121|ref|YP_001861463.1| aspartate racemase [Burkholderia phymatum STM815]
gi|184196453|gb|ACC74417.1| aspartate racemase [Burkholderia phymatum STM815]
Length = 487
Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 63/175 (36%), Gaps = 16/175 (9%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
++ L+ L I CNTA + E R P + + A A +
Sbjct: 285 ALYATCRKLEDGGANLIAIPCNTAHAFIAPIEARLRIPIVNMMSV-TADFLRATFPSVLR 343
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-----IKEDEIK 177
I +L+T T+ + + ++ + +RV G + E
Sbjct: 344 IGLLATDGTIASGVYREALEARGLA---EVLPPPAMQARVTNAIYGARGVKAGFTSGECV 400
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIAR 228
+I ++ ++I+LACT PL+ + ++ ++D +D +A+
Sbjct: 401 DDIIAAVESLLLQQVEIILLACTELPLLFP--QAITVTRHGRTAQFVDPADVLAK 453
>gi|33598574|ref|NP_886217.1| putative aspartate/glutamate racemase [Bordetella parapertussis
12822]
gi|33574703|emb|CAE39360.1| putative aspartate/glutamate racemase [Bordetella parapertussis]
Length = 244
Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 18/164 (10%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTP 129
L++ I CNTA +S S+ L V A+ +G + +L+T
Sbjct: 80 LEQAGAAAIAIPCNTAHVWYPQLAQSA--SVPVLHIVEAVLDDLRRQGIHAGRVGLLATA 137
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRVEEYACGIKIKEDEIKKEIEGCF 184
TLR + + + + + V V++ + C
Sbjct: 138 TTLRLGLYQHEMLAQGYEPVVPPVDLIDGLCAQSIRLVKQNLLPQALPPAL------ACI 191
Query: 185 IEKEGKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIA 227
D IVL CT PL + H R V D+ D++A
Sbjct: 192 DSLRAMGVDAIVLGCTELPLALPHALRAELG--VAMTDSIDALA 233
>gi|306480141|emb|CBV36372.1| glutamate racemase [Helicobacter pylori]
Length = 105
Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 8/105 (7%)
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDN 222
I E E+ + + +V++L CTH+PLI H + +
Sbjct: 1 ENILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHS 60
Query: 223 SDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
D+I + F SG ++ +
Sbjct: 61 GDAIVEYLQQ--KYALKKNACAFPKVEFHASGDVIWLEKQAKEWL 103
>gi|89098523|ref|ZP_01171406.1| aspartate racemase [Bacillus sp. NRRL B-14911]
gi|89086768|gb|EAR65886.1| aspartate racemase [Bacillus sp. NRRL B-14911]
Length = 237
Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 7/149 (4%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
GNWE K M + L+ VI NT L+ ++L+ + + V +
Sbjct: 58 GNWEKATEK---MIEAARFLETGGADCIVICTNTM-HLMAEDLQKACR-IPVIHIVECVV 112
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKI 171
+ + +L T T+ +T+ ++ + + + + E C K
Sbjct: 113 EEIKKQGIEAVGLLGTKFTMEQTFYKKILEEHGIKVLVPEEGDRERVHEVIFEELCRGKF 172
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
KED ++ E K I+L CT
Sbjct: 173 KEDSKAAYLD-IIHRLEKKGAQGIILGCT 200
>gi|33603524|ref|NP_891084.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
RB50]
gi|33577648|emb|CAE34913.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
RB50]
Length = 244
Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 18/164 (10%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTP 129
L++ I CNTA +S S+ L V A+ +G + +L+T
Sbjct: 80 LEQAGAAAIAIPCNTAHVWYPQLAQSA--SVPVLHIVEAVLDDLRRQGIHAGRVGLLATA 137
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRVEEYACGIKIKEDEIKKEIEGCF 184
TLR + + + + + V V++ + C
Sbjct: 138 TTLRLGLYQHEMLAQGYEPVVPPVDLIDGLCAQSIRLVKQNLLPQALPPAL------ACI 191
Query: 185 IEKEGKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIA 227
D IVL CT PL + H R V D+ D++A
Sbjct: 192 DSLRAMGVDAIVLGCTELPLALPHALRAELG--VAMTDSIDALA 233
>gi|18977352|ref|NP_578709.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638]
gi|18893031|gb|AAL81104.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638]
Length = 228
Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 39/131 (29%), Gaps = 7/131 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K V+ CNTA D++R K+ A+ +L+T T
Sbjct: 70 LEKCGADFIVMPCNTAHAF-IDDIRREVGIPVISMIEETAKRIASLGIKKA-GLLATTGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + Y + L E G + +I E+
Sbjct: 128 IVSGVYHKELEKYGLEILTPTEEEQELVMKGIYEGVKAGNLDLGRNLLLQIARILEER-- 185
Query: 190 KRTDVIVLACT 200
+ I+ CT
Sbjct: 186 -GAEAIIAGCT 195
>gi|320528690|ref|ZP_08029842.1| aspartate racemase [Solobacterium moorei F0204]
gi|320130900|gb|EFW23478.1| aspartate racemase [Solobacterium moorei F0204]
Length = 236
Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 48/149 (32%), Gaps = 15/149 (10%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
++A+ +R++ +L+ I CNT D L+ +K+
Sbjct: 61 ENAVYERMLHDCH-LLESCGSCCIAIPCNT-SHYFADRLQKEISIPIIHMPRETVKRLVK 118
Query: 117 YTQSGLISILSTPATLRRTYTSNLIH-----SYVSQCHIHLVSSMILASRVEEYACGIKI 171
T ++IL+T T+ I ++ I ++ ++ G +
Sbjct: 119 -TNHKKVAILATDGTIMTGVYRREIEAAGMQAWQPDAEIQKKVMSLIYDEIKRGEKGNRH 177
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
I + + D +L CT
Sbjct: 178 TFAAIDRAVR-------DAGCDCAILGCT 199
>gi|259503804|ref|ZP_05746706.1| aspartate racemase [Lactobacillus antri DSM 16041]
gi|259168236|gb|EEW52731.1| aspartate racemase [Lactobacillus antri DSM 16041]
Length = 239
Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 25/148 (16%)
Query: 66 FLFSDILDK--YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SG 121
L DI + P V+ CNTA D+L++ + L + + +
Sbjct: 64 ALIEDIQQQSLLNPAFFVLICNTA-HYAFDQLQAA-TKVPILNMLEETVAEIKRIKPDAK 121
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIK 172
+ +L+T T+ I Q + + + E+ +
Sbjct: 122 KVGLLATRGTVEAGLYDGYITRAGYQ---EIKPTPEIVDMTEDLIYHDIKEAGHSDGQKY 178
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ +++ +E + DV++L CT
Sbjct: 179 HELVRRMVEE-------EGADVVILGCT 199
>gi|306479961|emb|CBV36198.1| glutamate racemase [Helicobacter pylori]
Length = 102
Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 8/101 (7%)
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSI 226
E E+ + + +V++L CTH+PLI H + + D+I
Sbjct: 2 EGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAI 61
Query: 227 ARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ F SG ++ +
Sbjct: 62 VEYLQQ--KYALKKNACAFPKVEFHASGDVIWLEKQAKEWL 100
>gi|313901900|ref|ZP_07835319.1| aspartate racemase [Thermaerobacter subterraneus DSM 13965]
gi|313467841|gb|EFR63336.1| aspartate racemase [Thermaerobacter subterraneus DSM 13965]
Length = 309
Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 59/177 (33%), Gaps = 26/177 (14%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMA-----------FLGAVPAIKQAAAYTQS 120
L L +I CNTA + D L++ P G P + A
Sbjct: 135 LVSLGASLILIPCNTA-HVYFDRLQAASPVPILHIMREVARALVAGGAPGLPPA-----G 188
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE-IKKE 179
G +L+T T+ + + + +R A GIK E ++
Sbjct: 189 GPAGLLATELTVESGLYHRALAEVGLEVVVPAPEYQAEVTRAIFGADGIKAGVYEPARQR 248
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPL-IVHVFRQLSPW-PVDWLDNSDSIARRARCLL 234
+ + V++ CT PL + PV W+D ++ +AR A L
Sbjct: 249 LLEAGTHLVERGARVLIAGCTELPLVLRP------GDFPVPWVDPAEILARAALQRL 299
>gi|18978047|ref|NP_579404.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638]
gi|18893834|gb|AAL81799.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638]
Length = 231
Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 68/178 (38%), Gaps = 16/178 (8%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+KR++ + L++ L + NT ++ D+++ S+ + + A+ +
Sbjct: 61 RKRILINAAKALERAGAELIALTANTP-HIVFDDIQKEI-SVPMVSIIDAVAEEILSHGL 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178
+ +L T T+ + N + + + + +R+ EE A + I
Sbjct: 119 KKVLLLETKTTMSSGFYVNALKNKGLEVVVPNEEEQEELNRIIFEELAFENLKSKRWIID 178
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLP 235
IE + + + ++L CT PL V ++ D+++ + L+
Sbjct: 179 LIERY---AKEEGVEGVILGCTELPLAVKR-----GDVSIEVFDSAEI---HIKKLIE 225
>gi|254253826|ref|ZP_04947143.1| Aspartate racemase [Burkholderia dolosa AUO158]
gi|124898471|gb|EAY70314.1| Aspartate racemase [Burkholderia dolosa AUO158]
Length = 233
Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 10/170 (5%)
Query: 70 DILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D+L++ L I CNTA RS P + + A A +++L+T
Sbjct: 68 DLLNRSGVDLIAIPCNTAHHWYAPLRARSAAPILHIVDTAVAALPAG----VRRVAVLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + + + A + D +++
Sbjct: 124 GGTLASGLYQSALR--ARGIEPVMPGATAQRDIAACIAAVKAGRVDAAGRQLSRALATLV 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ DV V+ CT P+ H P+ +D + +AR
Sbjct: 182 RRDVDVAVMGCTEIPIAAHALGDA---PLALVDTTHELARATVAYAAERG 228
>gi|225573795|ref|ZP_03782550.1| hypothetical protein RUMHYD_01997 [Blautia hydrogenotrophica DSM
10507]
gi|225038823|gb|EEG49069.1| hypothetical protein RUMHYD_01997 [Blautia hydrogenotrophica DSM
10507]
Length = 235
Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 44/134 (32%), Gaps = 13/134 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + ++ CNTA L F + FL + +A + I +L+T T
Sbjct: 71 LQSFGADVLIMPCNTAHYFYDRILP--FVDIPFLSMIDETAKAISDRGLRKIGLLATDGT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-----YACGIKIKEDEIKKEIEGCFIE 186
L+ I + ++ A +I KK IE F
Sbjct: 129 LQTAVYEKAFKKR--GISIVVPPPENQVHIMDLIYNGVKAGNKEIDTKPTKKTIEDLF-- 184
Query: 187 KEGKRTDVIVLACT 200
K +VL CT
Sbjct: 185 --RKGAQTLVLGCT 196
>gi|242238706|ref|YP_002986887.1| aspartate racemase [Dickeya dadantii Ech703]
gi|242130763|gb|ACS85065.1| aspartate racemase [Dickeya dadantii Ech703]
Length = 236
Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 10/163 (6%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
IL+ ++ CNTA D+L+ + + A Q + +L+T
Sbjct: 69 RILENAGASCIIMPCNTA-HYWFDDLK-RHTRTEMISIIDATCQWIDEQSLRHVGLLATT 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+R + + +C + + + Y G ++ + E +
Sbjct: 127 ATVRADIYQHALSRQQVRCTLPSQAEQDAVMDSIYAYKAGNF---ALARQLLLPVQTELQ 183
Query: 189 GKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + I+L CT PL + P +LD ++++ R+
Sbjct: 184 RQGVEKIILGCTELPLILAPEI---LAAPAAYLDATEALVRKT 223
>gi|229105387|ref|ZP_04236032.1| amino-acid racemase [Bacillus cereus Rock3-28]
gi|228678044|gb|EEL32276.1| amino-acid racemase [Bacillus cereus Rock3-28]
Length = 258
Score = 57.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 91 EAMKKAIIEGAQK-LESTGVDFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLRAIPE 147
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + + IK E E
Sbjct: 148 T-VKRVALLATEATVQAGIYQDGIAKRN----IEYLHNEKWQEMINQIITCIKSGEVEEA 202
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D ++ACT
Sbjct: 203 RKLWSALVLQLKDEIDTAIIACT 225
>gi|229076262|ref|ZP_04209229.1| amino-acid racemase [Bacillus cereus Rock4-18]
gi|228706911|gb|EEL59117.1| amino-acid racemase [Bacillus cereus Rock4-18]
Length = 235
Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 68 EAMKKAIIEGAQK-LESAGVDFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLRAIPE 124
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + + IK E E
Sbjct: 125 T-VKRVALLATEATVQAGIYQDGIAKRN----IEYLHNEKWQEMINQIITCIKSGEVEEA 179
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D ++ACT
Sbjct: 180 RKLWSALVLQLKDEIDTAIIACT 202
>gi|255658868|ref|ZP_05404277.1| putative aspartate racemase [Mitsuokella multacida DSM 20544]
gi|260849273|gb|EEX69280.1| putative aspartate racemase [Mitsuokella multacida DSM 20544]
Length = 243
Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 21/134 (15%)
Query: 76 QPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ CNTA L+ LR + + + A + +L++ T
Sbjct: 77 GADFLIMGCNTAHYFLPLMMPNLR-----IPVINMIEETAAFCAREGYKRVGLLASAGTC 131
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI------KKEIEGCFIE 186
+ + + + EE G+ + + +
Sbjct: 132 KSGIYQRALER--AGVEVVQ-----PQGEAEEAIHGMIYDGVKAGNMGYDTTAVREALAQ 184
Query: 187 KEGKRTDVIVLACT 200
+ + VL CT
Sbjct: 185 MAAEGCEAFVLGCT 198
>gi|270291607|ref|ZP_06197827.1| aspartate racemase [Pediococcus acidilactici 7_4]
gi|270279926|gb|EFA25764.1| aspartate racemase [Pediococcus acidilactici 7_4]
Length = 235
Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 11/132 (8%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATL 132
+ P VIACNTA D+L+ +KQ + I I+ TP T
Sbjct: 74 RLNPAFFVIACNTA-HYFYDDLQKATEIPIVHMPRETVKQIKKEFPAAKRIGIIGTPGTT 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILAS----RVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + + + + E + ++ +I E+
Sbjct: 133 TDGIYDRELIAEGYEV---VKPTPEIQDLTSKLIFEDIKAQNKVDAQLFYQILRLMTEER 189
Query: 189 GKRTDVIVLACT 200
G + ++L CT
Sbjct: 190 GAQV--VILGCT 199
>gi|229099232|ref|ZP_04230164.1| amino-acid racemase [Bacillus cereus Rock3-29]
gi|229118246|ref|ZP_04247603.1| amino-acid racemase [Bacillus cereus Rock1-3]
gi|228665218|gb|EEL20703.1| amino-acid racemase [Bacillus cereus Rock1-3]
gi|228684213|gb|EEL38159.1| amino-acid racemase [Bacillus cereus Rock3-29]
Length = 235
Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 68 EAMKKAIIEGAQK-LESAGVDFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLRAIPE 124
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + + IK E E
Sbjct: 125 T-VKRVALLATEATVQAGIYQDGIAKRN----IEYLHNEKWQEMINQIITCIKSGEVEEA 179
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D ++ACT
Sbjct: 180 RKLWSALVLQLKDEIDTAIIACT 202
>gi|33591318|ref|NP_878962.1| putative aspartate/glutamate racemase [Bordetella pertussis Tohama
I]
gi|33570960|emb|CAE40431.1| putative aspartate/glutamate racemase [Bordetella pertussis Tohama
I]
gi|332380720|gb|AEE65567.1| putative aspartate/glutamate racemase [Bordetella pertussis CS]
Length = 244
Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 18/164 (10%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTP 129
L++ I CNTA +S S+ L V A+ +G + +L+T
Sbjct: 80 LEQAGATAIAIPCNTAHVWYPQLAQSA--SVPVLHIVEAVLDDLRRQGIHAGRVGLLATA 137
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVS-----SMILASRVEEYACGIKIKEDEIKKEIEGCF 184
TLR + + + + + V V++ + C
Sbjct: 138 TTLRLGLYQHEMLAQGYEPVVPPVDLIDGLCAQSIRLVKQNLLPQALPPAL------ACI 191
Query: 185 IEKEGKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIA 227
D IVL CT PL + H R V D+ D++A
Sbjct: 192 DSLRAMGVDAIVLGCTELPLALPHALRAELG--VAMTDSIDALA 233
>gi|229152950|ref|ZP_04281132.1| amino-acid racemase [Bacillus cereus m1550]
gi|228630563|gb|EEK87210.1| amino-acid racemase [Bacillus cereus m1550]
Length = 235
Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 10/151 (6%)
Query: 52 YGNWEDH-ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-P 109
Y + K+ + + L+ + CNTA L +EL+ + S+ L V
Sbjct: 60 YMDRPIDHETMKKAIIEGAQKLESTGVDFIAMPCNTA-HLYFEELQRSL-SIPILNIVDE 117
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
+K T+ +++L+T AT++ + I I + + + I
Sbjct: 118 TLKTIPENTK--RVALLATEATIQAGIYQDGIIKRN----IEYIHHEKWQEMISQIITSI 171
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
K E E +E+ + + D ++ACT
Sbjct: 172 KSGEVEEARELWNTLVLQLKDEVDTAIIACT 202
>gi|306480020|emb|CBV36255.1| glutamate racemase [Helicobacter pylori]
Length = 95
Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 8/92 (8%)
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235
+ +V++L CTH+PLI + + D+I + +
Sbjct: 4 RYYFTPLEILPEVVILGCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVKYLQQ--K 61
Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 62 YALKKNACAFPKVEFHASGDVVWLEKQAKEWL 93
>gi|290890562|ref|ZP_06553637.1| hypothetical protein AWRIB429_1027 [Oenococcus oeni AWRIB429]
gi|290479958|gb|EFD88607.1| hypothetical protein AWRIB429_1027 [Oenococcus oeni AWRIB429]
Length = 233
Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 9/133 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTP 129
L+ VI CNTA EL + M L QA +G ISIL+T
Sbjct: 72 LNSLSADFVVITCNTA-HYFLPELTA-IAKMPILNMPSLAVQACKKRTAGTLKISILATD 129
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEK 187
T+ I + Q I I + ++ +I+ D+ +E I+
Sbjct: 130 GTIASGLYQEKISAQSDQAIIPDKELQIQVMKFIYQDIKQNNRIEADKYHHLVEKLLIK- 188
Query: 188 EGKRTDVIVLACT 200
++ D ++L CT
Sbjct: 189 --QKCDYVILGCT 199
>gi|207093195|ref|ZP_03240982.1| glutamate racemase [Helicobacter pylori HPKX_438_AG0C1]
Length = 105
Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 8/103 (7%)
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSD 224
I E E+ + + +VI+L CTH+PLI + + D
Sbjct: 3 ILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHSGD 62
Query: 225 SIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+I + F SG ++ +
Sbjct: 63 AIVEYLQQ--KYALKKNACAFPKVEFHASGDVVWLEKQAKEWL 103
>gi|116491073|ref|YP_810617.1| aspartate racemase [Oenococcus oeni PSU-1]
gi|118586271|ref|ZP_01543727.1| aspartate racemase [Oenococcus oeni ATCC BAA-1163]
gi|116091798|gb|ABJ56952.1| aspartate racemase [Oenococcus oeni PSU-1]
gi|118433287|gb|EAV39997.1| aspartate racemase [Oenococcus oeni ATCC BAA-1163]
Length = 233
Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 9/133 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTP 129
L+ VI CNTA EL + M L QA +G ISIL+T
Sbjct: 72 LNSLSADFVVITCNTA-HYFLPELTA-IAKMPILNMPSLAVQACKKRTAGTLKISILATD 129
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEK 187
T+ I + Q I I + ++ +I+ D+ +E I+
Sbjct: 130 GTIASGLYQEKISAQSDQAIIPDKELQIQVMKFIYQDIKQNNRIEADKYHHLVEKLLIK- 188
Query: 188 EGKRTDVIVLACT 200
++ D ++L CT
Sbjct: 189 --QKCDYVILGCT 199
>gi|56460878|ref|YP_156159.1| aspartate racemase [Idiomarina loihiensis L2TR]
gi|56179888|gb|AAV82610.1| Aspartate racemase [Idiomarina loihiensis L2TR]
Length = 229
Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VIA NT + T ++ L V A+ + +L T T
Sbjct: 71 LESAGAECIVIATNTMHKVAPQI--ETAVTIPLLHIVDAVAAHLKQNSVHNVGLLGTRFT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+++ + + Q + I + ++ ++ +
Sbjct: 129 MQQPFYKERLEQNNVQVLVPEEEDSITVDSIIFKELCHGQFTEKAREHYLRVIDSLAERG 188
Query: 192 TDVIVLACT 200
++L CT
Sbjct: 189 AQGVILGCT 197
>gi|302391310|ref|YP_003827130.1| aspartate racemase [Acetohalobium arabaticum DSM 5501]
gi|302203387|gb|ADL12065.1| aspartate racemase [Acetohalobium arabaticum DSM 5501]
Length = 248
Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 66/166 (39%), Gaps = 14/166 (8%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP--AIKQAAAYTQSGLISILSTP 129
L + + CNTA DE+ + + FL + A + Y + +L+T
Sbjct: 71 LQQLGADYLAMPCNTA-HYFYDEVV-RYMDIPFLNMIEEVAAEVDRKYGNDSKVGLLATT 128
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIK-KEIEGCFIEK 187
T + ++ + ++L++ V + +K D+IK + + E
Sbjct: 129 GTYQVGIYEKVLQ----ESGVNLITPDESGKEAVYDVIYKVKEGFDDIKFQSVNNLLAEM 184
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + V++L CT PLI +D++D ++ +A+R
Sbjct: 185 KKQGVSVVILGCTELPLIKDK----LDSEIDYMDCTEILAQRIVDY 226
>gi|184154717|ref|YP_001843057.1| aspartate racemase [Lactobacillus fermentum IFO 3956]
gi|260663254|ref|ZP_05864146.1| aspartate racemase [Lactobacillus fermentum 28-3-CHN]
gi|183226061|dbj|BAG26577.1| aspartate racemase [Lactobacillus fermentum IFO 3956]
gi|260552446|gb|EEX25497.1| aspartate racemase [Lactobacillus fermentum 28-3-CHN]
Length = 237
Score = 56.5 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 17/133 (12%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS-GLISILSTPATLR 133
QP V+ CNTA +L++ + L +K+ + +L+TP T+
Sbjct: 76 QPEFFVLICNTA-HYFFKDLQAA-TEIPILNMLEETVKEIKKIKPDAKKVGLLATPGTVE 133
Query: 134 RTYTSNLIH----SYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEIEGCFIEK 187
+ I + L ++ L E + ++K +E
Sbjct: 134 SGIYDHYIQAAGYEELKPTQEILDATEDLIYHDIKEAGHSDGAKYHELVRKMVEE----- 188
Query: 188 EGKRTDVIVLACT 200
+ DV++L CT
Sbjct: 189 --QGADVVILGCT 199
>gi|227513984|ref|ZP_03944033.1| aspartate racemase [Lactobacillus fermentum ATCC 14931]
gi|227087628|gb|EEI22940.1| aspartate racemase [Lactobacillus fermentum ATCC 14931]
Length = 241
Score = 56.5 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 17/133 (12%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS-GLISILSTPATLR 133
QP V+ CNTA +L++ + L +K+ + +L+TP T+
Sbjct: 80 QPEFFVLICNTA-HYFFKDLQAA-TEIPILNMLEETVKEIKKIKPDAKKVGLLATPGTVE 137
Query: 134 RTYTSNLIH----SYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEIEGCFIEK 187
+ I + L ++ L E + ++K +E
Sbjct: 138 SGIYDHYIQAAGYEELKPTQEILDATEDLIYHDIKEAGHSDGAKYHELVRKMVEE----- 192
Query: 188 EGKRTDVIVLACT 200
+ DV++L CT
Sbjct: 193 --QGADVVILGCT 203
>gi|254173547|ref|ZP_04880219.1| aspartate racemase [Thermococcus sp. AM4]
gi|214032239|gb|EEB73069.1| aspartate racemase [Thermococcus sp. AM4]
Length = 226
Score = 56.5 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 64/168 (38%), Gaps = 15/168 (8%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+KR++ + L++ + + NT ++ +++ S+ + + A+ +
Sbjct: 58 RKRILINAARALERAGAEVIALTANTP-HIVFPDVQRAV-SVPMVSIIDALIEEMKRRGV 115
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178
+ +L T T+ + + + + + +R+ EE A + +
Sbjct: 116 RKVLLLGTKTTMTADFYREALLKAGFEVVVPEGDEIEEVNRIIFEELAFEDLRSKPYLLS 175
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSD 224
+E +E + + ++L CT PL R P V+ D ++
Sbjct: 176 LVERY---REERGIEGVILGCTELPL---AIR---PGDVPVEVFDTAE 214
>gi|307324785|ref|ZP_07603991.1| aspartate racemase [Streptomyces violaceusniger Tu 4113]
gi|306889667|gb|EFN20647.1| aspartate racemase [Streptomyces violaceusniger Tu 4113]
Length = 238
Score = 56.5 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 18/158 (11%)
Query: 82 IAC--NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
IAC NT + S+ FL I AA T++ + +L T + + +
Sbjct: 79 IACGSNTMHRVAPAI--EAAVSIPFLHIADVIAHAAHQTRARTLGLLGTLPVMEANFYRD 136
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ + + L R+ I D+ + + + + D I+L C
Sbjct: 137 RLADHGLSAVVPEQDDRTLVDRIIFDELTRNIFTDDSRAQYLRVMEQLAARGADAIILGC 196
Query: 200 THYPLIVHVFRQLSPWP----VDWLDNSDSIARRARCL 233
T QL + LD+ A +
Sbjct: 197 T-------EITQLIGPQDFPSLPLLDS---TALHVESI 224
>gi|163756473|ref|ZP_02163586.1| aspartate racemase [Kordia algicida OT-1]
gi|161323581|gb|EDP94917.1| aspartate racemase [Kordia algicida OT-1]
Length = 229
Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 8/161 (4%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
L +M + L+K +I NT L D +R + S+ + A +
Sbjct: 58 DLLDDIMAETAKSLEKAGAECILICANTM-HLTIDAVRKSV-SIPVIHIAEATAEKILEK 115
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+ I++L T T+ + + ++ S+ + I + RV + ++ ++
Sbjct: 116 KLNTIALLGTKYTMEKDFYKAVLASFGIKTLIPNEAEREEVHRVIYEELSKGMLKESSRE 175
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ + + ++L CT PL+ +Q V
Sbjct: 176 AYVNIIERLQKEGAEGVILGCTEIPLL---IQQ---EDVAI 210
>gi|304384561|ref|ZP_07366907.1| aspartate racemase [Pediococcus acidilactici DSM 20284]
gi|304328755|gb|EFL95975.1| aspartate racemase [Pediococcus acidilactici DSM 20284]
Length = 235
Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 11/132 (8%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATL 132
+ P VIACNTA D+L+ +KQ + I I+ TP T
Sbjct: 74 RLNPAFFVIACNTA-HYFYDDLQKATEFPIVHMPRETVKQIKKEFPAAKRIGIIGTPGTT 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILAS----RVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + + + + E + ++ +I E+
Sbjct: 133 TDGIYDRELIAEGYEV---VKPTPEIQDLTSKLIFEDIKAQNKVDAQLFYQILRLMTEER 189
Query: 189 GKRTDVIVLACT 200
G + ++L CT
Sbjct: 190 GAQV--VILGCT 199
>gi|268317965|ref|YP_003291684.1| aspartate racemase [Rhodothermus marinus DSM 4252]
gi|262335499|gb|ACY49296.1| aspartate racemase [Rhodothermus marinus DSM 4252]
Length = 254
Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 62/182 (34%), Gaps = 22/182 (12%)
Query: 66 FLFSDILDKYQPVLSVIA--CNTAFT-----LIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ I V+ CNTA ++ +EL T + L + +
Sbjct: 66 AIAEQIRMAESVGAVVVGIPCNTAHAPSIFNVMLEELARTGSRVRVLHLIEETVRFLREH 125
Query: 119 --QSGLISILSTPATLRRTYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKED 174
+ +LST AT R + + + I V I+ + + + GIK +
Sbjct: 126 YPDVKRVGVLSTLATYRLGLYRKALEAAGYEAVIADESVQETIVNRAIFDPSYGIKAQSH 185
Query: 175 EIKKEIEGCFI----EKEGKRTDVIVLACTHYPLIVHVFRQLSPW--PVDWLDNSDSIAR 228
+ K + K + +VL CT PL V P + +D S ++AR
Sbjct: 186 PVSKIARQSVLTGIEHLRQKGVEAVVLGCTELPLAVPE-----PEVDGIPIIDPSLALAR 240
Query: 229 RA 230
Sbjct: 241 AL 242
>gi|194468062|ref|ZP_03074048.1| aspartate racemase [Lactobacillus reuteri 100-23]
gi|194452915|gb|EDX41813.1| aspartate racemase [Lactobacillus reuteri 100-23]
Length = 239
Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 23/136 (16%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
P V+ CNTA D+L++ + L + + + + +L+T TL
Sbjct: 76 NPAFFVLICNTA-HYSFDKLQAA-TEIPILNMLQETVNEIKKIKPDTKRVGLLATKGTLA 133
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIKEDEIKKEIEGCF 184
I + + + +A E+ + ++K IE
Sbjct: 134 ANLYDPYIEKAGYEL---IKPTPEIAEMTEDLIYHDIKEAGHSDGNKYHELVRKMIEE-- 188
Query: 185 IEKEGKRTDVIVLACT 200
+ DV+VL CT
Sbjct: 189 -----QGADVVVLGCT 199
>gi|229032411|ref|ZP_04188381.1| amino-acid racemase [Bacillus cereus AH1271]
gi|228728913|gb|EEL79919.1| amino-acid racemase [Bacillus cereus AH1271]
Length = 225
Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 71/185 (38%), Gaps = 17/185 (9%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 57 EAMKKAIIEGAQK-LESTGVEFIAMPCNTA-HLYFEELQHSL-SIPVLNIVDETLQAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +++L+T AT++ + I I + + + + IK E E
Sbjct: 114 N-TKRVALLATEATIQAGIYQDGITKRN----IEYIHHEKWQTMINQIITCIKGGEIEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
+E+ + + D ++ACT ++ ++D++ +A + +
Sbjct: 169 RELWSVLVVQLKAEVDTAIIACT-------DLNVVAGED--FVDSAQCLAEAVVRMYAKN 219
Query: 238 NTHQT 242
++
Sbjct: 220 GSNPN 224
>gi|115361170|ref|YP_778307.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115286498|gb|ABI91973.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 234
Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 28/192 (14%)
Query: 56 EDHALKKRLMF----LFSDILDKYQPVL-------SVIACNTAFTLIKDELRSTFPSMAF 104
+ +++R + D+L L ++ACNT T + + F
Sbjct: 46 DFEEIERRQREGRWDIVGDLLAAEGNKLKAAGADFFLLACNTVHTAAERI--EANVDLPF 103
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILA--SR 161
+ V ++ + +L + T+ TY S L Y I +
Sbjct: 104 IHIVDPTARSVLERGYKTVGLLGSRYTMTGTYFVSRLKDRYGLDVVIAEGEHQENVHNAL 163
Query: 162 VEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP-LIVHVFRQLSPWPVDWL 220
EE A GI + E +++ + + +VIVL CT + L+ PV +
Sbjct: 164 YEELAKGIFL--PETREKFRRAIADLVSRGAEVIVLGCTEFGMLVKPE-----DSPVPII 216
Query: 221 DN----SDSIAR 228
D +++ R
Sbjct: 217 DTTIAHAEAAVR 228
>gi|266623105|ref|ZP_06116040.1| aspartate racemase [Clostridium hathewayi DSM 13479]
gi|288865142|gb|EFC97440.1| aspartate racemase [Clostridium hathewayi DSM 13479]
Length = 235
Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 48/137 (35%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ ++ L K VI NT ++ +++S + L A + +
Sbjct: 63 ILGEAAESLQKAGADFIVICTNTMHKVV-PQIQSKI-HIPILHIAEAAALRLKAERMDRV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + Y + I S + +RV I + K+
Sbjct: 121 GLLGTKYTMTQDFYKGKLAEYGVEVLIPEASEIETVNRVIYGELCRGILSETSKEAYLTI 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 181 IAHLKERGAQGVILGCT 197
>gi|84497910|ref|ZP_00996707.1| hypothetical protein JNB_17523 [Janibacter sp. HTCC2649]
gi|84381410|gb|EAP97293.1| hypothetical protein JNB_17523 [Janibacter sp. HTCC2649]
Length = 229
Score = 55.7 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ ++ L + ++A NT + DEL+ + L + A +
Sbjct: 63 ILARAAEGLARGGAEALLVATNTMHKVA-DELQQA-SGLPLLHIADSTADAIVADGVSRV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T+ + + + + + + R+ + + DE +
Sbjct: 121 GLLATAFTMEQDFYVGRLRAKGLEVIVPDAPQRAEVHRIIYDELCLDVVLDESRAAYRDV 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 181 MASLVERGAQAVILGCT 197
>gi|148543519|ref|YP_001270889.1| aspartate racemase [Lactobacillus reuteri DSM 20016]
gi|184152925|ref|YP_001841266.1| aspartate racemase [Lactobacillus reuteri JCM 1112]
gi|227363526|ref|ZP_03847646.1| aspartate racemase [Lactobacillus reuteri MM2-3]
gi|325681867|ref|ZP_08161385.1| aspartate racemase [Lactobacillus reuteri MM4-1A]
gi|148530553|gb|ABQ82552.1| aspartate racemase [Lactobacillus reuteri DSM 20016]
gi|183224269|dbj|BAG24786.1| aspartate racemase [Lactobacillus reuteri JCM 1112]
gi|227071463|gb|EEI09766.1| aspartate racemase [Lactobacillus reuteri MM2-3]
gi|324978511|gb|EGC15460.1| aspartate racemase [Lactobacillus reuteri MM4-1A]
Length = 236
Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 47/136 (34%), Gaps = 23/136 (16%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS-GLISILSTPATLR 133
P V+ CNTA D+L++ + L + + + + +L+T TL
Sbjct: 76 NPAFFVLICNTA-HYSFDKLQAA-TEIPILNMLQETVNEIKKIKPDAKRVGLLATKGTLA 133
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIKEDEIKKEIEGCF 184
I + + + +A E+ K + ++K IE
Sbjct: 134 ANLYDPYIEKAGYEL---IKPTPEIADMTEDLIYHDIKEAGHSDGKKYHELVRKMIEE-- 188
Query: 185 IEKEGKRTDVIVLACT 200
+ DV+VL CT
Sbjct: 189 -----QGVDVVVLGCT 199
>gi|307944396|ref|ZP_07659737.1| hypothetical protein TRICHSKD4_3058 [Roseibium sp. TrichSKD4]
gi|307772742|gb|EFO31962.1| hypothetical protein TRICHSKD4_3058 [Roseibium sp. TrichSKD4]
Length = 973
Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/323 (12%), Positives = 68/323 (21%), Gaps = 127/323 (39%)
Query: 6 YPCEKKLQNSILIFDSGIGG-----LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
P + L ++ DSGIGG L V +R V P G+ + +
Sbjct: 30 RPGYQNL-GTVGFVDSGIGGAMAAGL-VEGHVRE---------FGSQVALPIGDKHPNQI 78
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAF-------------------------------- 88
+ + + L ++IACNTA
Sbjct: 79 ETFTAQMVAQSLIVDGHEYAIIACNTASCKKEKAVEHLENFIKREAGRSDDESQLSGPAR 138
Query: 89 ------TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--------LISILSTPATLRR 134
+ P ++AA + I I ST T+
Sbjct: 139 ARVLELAAKLEADPDYIKDRVLSIVEPTAERAAQKAVNAFNNGESSYSILIDSTDGTVNS 198
Query: 135 TYTSNLIHS---------------------------------------YVSQCHIHLVSS 155
IH+ I +
Sbjct: 199 KAYPEAIHAAMVKEGFTPVGEPVVVESKDENGQSAVRKTAYTYRNDKGEEKVVAITSRGN 258
Query: 156 MILASRVEEYACGIKI-------KEDEIKK---------------EIEGCFIEKEGKRTD 193
+E ++ ++ + F +
Sbjct: 259 PAWVPAIEAGQLSDPATDGQGTRADELVRNSRARSNELQFGEPNTHLNAAFADPPDLNM- 317
Query: 194 VIVLACTHYPLIVHVFRQLSPWP 216
L CTHYP + +
Sbjct: 318 ---LCCTHYPAMRSALQSDYGED 337
>gi|59712154|ref|YP_204930.1| aspartate racemase [Vibrio fischeri ES114]
gi|59480255|gb|AAW86042.1| aspartate racemase [Vibrio fischeri ES114]
Length = 236
Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 72/218 (33%), Gaps = 52/218 (23%)
Query: 12 LQNSILIFDSGIGGL----IV---LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ + I +GG+ V L+ + P ++ D P + R
Sbjct: 1 MNKKLGI----LGGMGPLATVEFMLK-IISQTPAHN-----DQEHIPMVVSSVPQIPDRT 50
Query: 65 MFLFS-------------DILDKYQPVLSVIACNTA-------FTLIKDELRSTFPSMAF 104
F+ + L++ VI CNTA +
Sbjct: 51 AFIMGHGQDPYPELKHSFEQLERSGAECIVIPCNTAHYWYPQLSATS---------HVHT 101
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR-VE 163
+ + ++ Q A + + +L+T AT++ ++ Y HI ++ + + R V
Sbjct: 102 ISIIDSVVQEAQNRRYKTVGLLATTATMKARMYQQKLNQY----HIEVIETDDIQQRDVM 157
Query: 164 EYACGIKIKEDEIKKEI-EGCFIEKEGKRTDVIVLACT 200
+ +K E K + F + + ++L CT
Sbjct: 158 QGIYEVKAGNVEKGKALMLPVFESMLAQGAEAVILGCT 195
>gi|290473194|ref|YP_003466059.1| putative aspartate/glutamate racemase [Xenorhabdus bovienii
SS-2004]
gi|289172492|emb|CBJ79259.1| putative aspartate/glutamate racemase [Xenorhabdus bovienii
SS-2004]
Length = 243
Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 66/191 (34%), Gaps = 10/191 (5%)
Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
+D+ + ++ L + + +I NT D L S ++ + + A
Sbjct: 54 RDDNETEFNILSKAVHQLAQAEVKKILICSNTTSNTC-DRL-SKLVNIPIINIIDATANK 111
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKI 171
+ + ++ T + R + + ++ + I+ + + C +
Sbjct: 112 LLSMKVSNVGLIGTQYVMERDFYKKRLE--AKGINVLIPRSRTRQIIHDSIYQDLCRYAL 169
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
D + + E + ++L CT PL+V ++ + +D+ D+ A
Sbjct: 170 T-DTSRGIMYRAIDELAELGAEAVILGCTEIPLVVSD--RVYQNSIKIIDSIDAHIEAAL 226
Query: 232 CLLPRINTHQT 242
L P N +
Sbjct: 227 SLTPENNNTSS 237
>gi|186470440|ref|YP_001861758.1| aspartate racemase [Burkholderia phymatum STM815]
gi|184196749|gb|ACC74712.1| aspartate racemase [Burkholderia phymatum STM815]
Length = 499
Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 12/144 (8%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122
++ L++ + I CNTA ++ + + + + + G
Sbjct: 306 SLYATCKRLEEGDADIIAIPCNTAHAFVERI--QPHLGIPIVNMLTETVRFVRESWPGYR 363
Query: 123 -ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK-----IKEDEI 176
I +L+T T+ + S + + L +RV E G
Sbjct: 364 DIGVLATSGTISSGVYEKALQSQGLR-QVT--PGEALQTRVMEAIYGNNGVKAGFTTGRC 420
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
+++I + ++I+L CT
Sbjct: 421 QEDIAAAVEGMIAEGVEIIILGCT 444
>gi|206896546|ref|YP_002247561.1| aspartate racemase [Coprothermobacter proteolyticus DSM 5265]
gi|206739163|gb|ACI18241.1| aspartate racemase [Coprothermobacter proteolyticus DSM 5265]
Length = 239
Score = 55.3 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 71/170 (41%), Gaps = 16/170 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQSGLISIL 126
+ +L+ +ACNTA + + ++++ + F+ V ++ + ++Q+ I +
Sbjct: 71 ARLLESAGVNAICMACNTA-HIFESDIKAHI-HVDFISIVDSVLNELKGTFSQAKSIGLA 128
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI---EGC 183
T + + ++ + L E IK+ IK+ I E
Sbjct: 129 GTMGVFSSHLYDEPLMQRGYKL---ILPTNELQE--ELMKVIYSIKQGCIKEVIDKAEEL 183
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ ++ DV+++ACT PL++ P+ +D+++++A+
Sbjct: 184 LQWYKDQKADVLIMACTELPLVLDYLV----PPIPVVDSTEALAKSVVRY 229
>gi|312870649|ref|ZP_07730759.1| aspartate racemase [Lactobacillus oris PB013-T2-3]
gi|311093815|gb|EFQ52149.1| aspartate racemase [Lactobacillus oris PB013-T2-3]
Length = 239
Score = 55.3 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 51/148 (34%), Gaps = 25/148 (16%)
Query: 66 FLFSDILDK--YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SG 121
L DI + P V+ CNTA D+L++ ++ L + + +
Sbjct: 64 ALIEDIQQQSLLNPAFFVLICNTA-HYAFDQLQAA-TTIPILNMLEETVAEIKRIKPDAK 121
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIK 172
+ +L+T T+ I + + + + E+ +
Sbjct: 122 KVGLLATRGTVEAGLYDGYITKAGYE---EIKPTPEILDMTEDLIYHDIKEAGHSDGQKY 178
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ ++K +E + DV++L CT
Sbjct: 179 HELVRKMVEE-------EGADVVILGCT 199
>gi|104774694|ref|YP_619674.1| aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|300812326|ref|ZP_07092762.1| aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313124623|ref|YP_004034882.1| aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|103423775|emb|CAI98781.1| Aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|300496746|gb|EFK31832.1| aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312281186|gb|ADQ61905.1| Aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|325126515|gb|ADY85845.1| Aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325684939|gb|EGD27083.1| aspartate racemase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 249
Score = 55.3 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127
K P V+ CNTA D+L + + FL ++ A + S I +++
Sbjct: 73 AKLGPDFMVMPCNTA-HYFYDDL-AALTDIPFLHM---MRIAVHQYVDQFPNSPKIGLIA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T ++ + IH + + V E ++ + KE+ + K
Sbjct: 128 TEGSIYDHLYEDEIHRVGREVE---FGGPEIQPMVTELIYRDIKEKGIVDKELYHEILRK 184
Query: 188 --EGKRTDVIVLACT 200
+ DVI+L CT
Sbjct: 185 MHDEYGCDVILLGCT 199
>gi|284161291|ref|YP_003399914.1| aspartate racemase [Archaeoglobus profundus DSM 5631]
gi|284011288|gb|ADB57241.1| aspartate racemase [Archaeoglobus profundus DSM 5631]
Length = 227
Score = 55.3 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 54/144 (37%), Gaps = 6/144 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + IL+ +I NT + D ++S ++ L + + + +
Sbjct: 63 ILAEKAKILENAGADFILICTNTMHKVA-DYVQSRI-NVPLLSIIDCVAREVVKRGIKRV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIE 181
+L T T+ + + + Y + I R+ EE GI K+++
Sbjct: 121 GLLGTKFTMEDGFYEDGLRKYGLEVVIPDEEDRNEVHRIIFEELCRGIFKDSS--KRKLI 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLI 205
+ K + ++L CT PL+
Sbjct: 179 EIIERLKMKGAEGVILGCTELPLL 202
>gi|52140751|ref|YP_086078.1| aspartate racemase [Bacillus cereus E33L]
gi|51974220|gb|AAU15770.1| aspartate racemase [Bacillus cereus E33L]
Length = 224
Score = 55.3 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK E E
Sbjct: 114 TA-KKVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+E+ + + D +++ACT
Sbjct: 169 RELWSALVLQLKDEVDTVIIACT 191
>gi|187919407|ref|YP_001888438.1| aspartate racemase [Burkholderia phytofirmans PsJN]
gi|187717845|gb|ACD19068.1| aspartate racemase [Burkholderia phytofirmans PsJN]
Length = 233
Score = 55.3 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 18/166 (10%)
Query: 70 DILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D+L++ L I CN+A + RS P + A A A+A +++L T
Sbjct: 68 DLLNRNGVGLIAIPCNSAHHWYAQIAARSAAPVLHIAEACVAAVPASA----RRVAVLGT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL+ + + + + + S ++ +
Sbjct: 124 GGTLKSGFYQAALS--ARDIEPLVPGADLQQSIATCIREVKAGALEQAAGHLSTVLGALA 181
Query: 189 GKRTDVIVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRA 230
+ V+ACT R LS P+ +D+S +AR
Sbjct: 182 AQDVRAAVMACT-------EIPVAARHLSNPPLTLIDSSLELARAT 220
>gi|307130332|ref|YP_003882348.1| putative aspartate racemase [Dickeya dadantii 3937]
gi|306527861|gb|ADM97791.1| Probable aspartate racemase [Dickeya dadantii 3937]
Length = 256
Score = 55.3 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 82/255 (32%), Gaps = 48/255 (18%)
Query: 22 GIGGL-IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL--KKRLMFLFS------- 69
G+G L V LQK+ P D P W + ++R +
Sbjct: 15 GMGPLATVDLLQKIIAATPAER-----DQQHVPVAVWNVPQIPDRQRALAGIGASPLPAL 69
Query: 70 ----DILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGA-VPAIKQAAAYTQSGL 122
+ L++ +I CNTA DEL++ P + + + A A T S
Sbjct: 70 LDGVERLNRLDISHLIIPCNTA-HHWFDELQAASRAPVLHIADVTLIQAQAALADTSSPR 128
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +++T TL + + + + + + G + ++
Sbjct: 129 VGLIATHGTLAAGWYQRRLAALDIETVLPDEQEMDNLFVPGCYAVKRGDVAAGGGLFGQL 188
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP--------WPVDWLDNSDSIARRARC 232
+ ++LACT +++P W +D+++++AR
Sbjct: 189 AERLAARGATH---LILACT----------EVAPGLAAMQSRWLARSIDSTEALARHCVA 235
Query: 233 LLPRINTHQTRVFDD 247
L + D
Sbjct: 236 LWREQAGGNEKPPDG 250
>gi|157960769|ref|YP_001500803.1| aspartate racemase [Shewanella pealeana ATCC 700345]
gi|157845769|gb|ABV86268.1| aspartate racemase [Shewanella pealeana ATCC 700345]
Length = 230
Score = 55.3 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 49/165 (29%), Gaps = 13/165 (7%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + + +I NT + DE+++ S+ L A
Sbjct: 61 AEILSDAAKNVAAGGADFLLICTNTMHKVA-DEIQAQL-SIPILHIADATAAKLVANGVT 118
Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L T T+ + + LI+ + + + + L +V + K++
Sbjct: 119 RVGLLGTRFTMEQDFYKSRLINQFGIEVIVPNEAERNLVHQVIYEELCQGVVNSTSKQQY 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222
+ ++L CT L V D
Sbjct: 179 LDIVNALHAQGAQAVILGCT-------EIALLVGQQDTQVPLYDT 216
>gi|14521575|ref|NP_127051.1| aspartate racemase [Pyrococcus abyssi GE5]
gi|5458794|emb|CAB50281.1| racD-1 aspartate racemase [Pyrococcus abyssi GE5]
Length = 228
Score = 55.3 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 12/150 (8%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G L K L++ ++ CNTA +++R + + +
Sbjct: 56 GEDPRPELIKTAKK-----LEECGADFIIMPCNTAHAF-IEDIRKAIR-IPIISMIEETA 108
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-GIKI 171
+ + +L+T T+ Y + L+ V + G+K
Sbjct: 109 KKVKELGFKKVGLLATTGTIASGVYEKEFSKY--GIEV-LIPREDEQEEVMKGIYDGVKA 165
Query: 172 KEDEI-KKEIEGCFIEKEGKRTDVIVLACT 200
E+ K+ + + E + + I+ CT
Sbjct: 166 GNLELGKELLIKIARKLEERGAECIIAGCT 195
>gi|172065416|ref|YP_001816128.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171997658|gb|ACB68575.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 205
Score = 55.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 20/184 (10%)
Query: 61 KKRLMFLFSDILDKYQPVL-------SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
++ + D+L L ++ACNT T + + F+ V +
Sbjct: 26 REGRWDIVGDLLAAEGNKLKAAGADFFLLACNTVHTAAERI--EANVDLPFIHIVDPTAR 83
Query: 114 AAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA--SRVEEYACGIK 170
+ + +L + T+ TY L Y I + EE A GI
Sbjct: 84 SVLERGYKTVGLLGSRYTMTGTYFVGRLKDRYGLDVVIAEGEHQENVHNALYEELAKGIF 143
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDNSDSIARR 229
+ E +++ + + +VIVL CT + L+ PV +D S + A
Sbjct: 144 L--PETREKFRRAIADLVSRGAEVIVLGCTEFGMLVKPE-----DSPVPIIDTSIAHAEA 196
Query: 230 ARCL 233
A L
Sbjct: 197 AVRL 200
>gi|218905985|ref|YP_002453819.1| probable amino-acid racemase [Bacillus cereus AH820]
gi|218539387|gb|ACK91785.1| probable amino-acid racemase [Bacillus cereus AH820]
Length = 224
Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 17/176 (9%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK E E
Sbjct: 114 TA-KRVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+E+ + + D ++ACT ++ D++D+S +A+ +
Sbjct: 169 RELWSALVLQLKDEVDTAIIACTDLNVLASE---------DFVDSSQCLAKAVVRM 215
>gi|306479692|emb|CBV35939.1| glutamate racemase [Helicobacter pylori]
Length = 94
Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 8/92 (8%)
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235
+ +VI+L CTH+PLI + + D+I +
Sbjct: 3 RYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHSGDAIVEYLQQ--K 60
Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
T F SG ++ +
Sbjct: 61 YALKKNTHAFPKVEFHASGDVIWLEKQAKEWL 92
>gi|50120438|ref|YP_049605.1| aspartate racemase [Pectobacterium atrosepticum SCRI1043]
gi|49610964|emb|CAG74409.1| probable aspartate racemase [Pectobacterium atrosepticum SCRI1043]
Length = 238
Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 8/162 (4%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
IL+ +I CNTA +EL+ S + + QA T + + +L+T
Sbjct: 69 KILENAGAECIIIPCNTA-HYWFNELKQQC-SAEMISIIDVTCQAIRNTNTTRVGLLATT 126
Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ R Y NLI + + + Y G + ++ ++
Sbjct: 127 ATVKARIYQDNLITDNIECYTPDDADQHQVMESIYAYKSGDIAGAYSMLSPVKDRLLQ-- 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ I+L CT PLI+ ++SP ++D ++ + ++
Sbjct: 185 -AGVEKIILGCTELPLILEQEVRISPQH--YVDATEELIKKT 223
>gi|229175471|ref|ZP_04302982.1| amino-acid racemase [Bacillus cereus MM3]
gi|228608003|gb|EEK65314.1| amino-acid racemase [Bacillus cereus MM3]
Length = 224
Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 57 EAMKKAIIEGAQK-LESTGVSFIAMPCNTA-HLYFEELQRSI-SIPILNIVDETLQAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK E E
Sbjct: 114 TA-KKVTLLATEATIQAGIYQDGITKRN----IEYIHHEKWQEMISQIITFIKSGEVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+E+ + + + D +++ACT
Sbjct: 169 RELWNALVLQLREEVDTVIIACT 191
>gi|73541409|ref|YP_295929.1| aspartate racemase [Ralstonia eutropha JMP134]
gi|72118822|gb|AAZ61085.1| aspartate racemase [Ralstonia eutropha JMP134]
Length = 233
Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 16/165 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D+L++ Q L VI CN+ +LR S L AA + +++L+T
Sbjct: 68 DLLNRNQVGLVVIPCNS-SHHWYRQLRER-SSAPILHIASTCV-AALPHGTRRVAVLATR 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
L + + Q + + + + + ++
Sbjct: 125 GALASRIYQDALAERDIQPVVPDEAEQVQVDTC--IRSVKAGAFEAAGEALQAVLASLAA 182
Query: 190 KRTDVIVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRA 230
+ V ++ CT RQL P+ +D++ +AR
Sbjct: 183 RNIGVAIMGCT-------EIPVALRQLRSAPLTMIDSTLELARAT 220
>gi|332654847|ref|ZP_08420589.1| aspartate racemase [Ruminococcaceae bacterium D16]
gi|332516190|gb|EGJ45798.1| aspartate racemase [Ruminococcaceae bacterium D16]
Length = 239
Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 7/145 (4%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ +RL+ +L+ + CNT D ++ S+ + + +
Sbjct: 61 KDEVYERLLSDA-RMLEGAGCTAIAVPCNT-SHYFLDRVQEQI-SIPIVHMIRETARLLV 117
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDE 175
IL+T T+R ++ ++ S + + K + E
Sbjct: 118 SQGKKRPGILATDGTIRTGLYQREFAAFGIYAAAPRPAAQKQVMSLIYDDIKAGKAGDPE 177
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
+ + + D VLACT
Sbjct: 178 ---KFAAFTKDLVEQGCDCAVLACT 199
>gi|197335438|ref|YP_002156361.1| aspartate racemase [Vibrio fischeri MJ11]
gi|197316928|gb|ACH66375.1| aspartate racemase [Vibrio fischeri MJ11]
Length = 236
Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 67/217 (30%), Gaps = 50/217 (23%)
Query: 12 LQNSILIFDSGIGGL----IV---LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ + I +GG+ V L+ + P ++ D P + R
Sbjct: 1 MNKKLGI----LGGMGPLATVEFMLK-IISQTPAHN-----DQEHIPMVVSSVPQIPDRT 50
Query: 65 MFLFS-------------DILDKYQPVLSVIACNTA-------FTLIKDELRSTFPSMAF 104
F+ + L++ VI CNTA ++
Sbjct: 51 AFIMGHGQDPYPELKHSFEQLEQSGAECIVIPCNTAHYWYPQLSATS---------NVHT 101
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164
+ + ++ Q A + + +L+T AT++ ++ Y + V +
Sbjct: 102 ISIIDSVVQEAQARRYKTVGLLATTATMKARMYQQKLNQYN--IDVIETDDTQQ-RDVMQ 158
Query: 165 YACGIKIKEDEIKKEI-EGCFIEKEGKRTDVIVLACT 200
+K E K + F + + ++L CT
Sbjct: 159 GIYEVKAGNVEKGKALMLPVFKSMLAQGAEAVILGCT 195
>gi|49478746|ref|YP_038797.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49330302|gb|AAT60948.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 224
Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 19/177 (10%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAA 116
A+KK ++ L+ + CNTA L +EL+ + S+ L V +K
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T+ +++L+T AT++ + I I + + + IK E E
Sbjct: 114 NTK--RVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEE 167
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+E+ + + D ++ACT ++ D++D+S +A+ +
Sbjct: 168 ARELWSALVLQLKDEVDTAIIACTDLNVLASE---------DFIDSSQCLAKAVVRM 215
>gi|332799598|ref|YP_004461097.1| Asp/Glu/hydantoin racemase [Tepidanaerobacter sp. Re1]
gi|332697333|gb|AEE91790.1| Asp/Glu/hydantoin racemase [Tepidanaerobacter sp. Re1]
Length = 223
Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 55/171 (32%), Gaps = 14/171 (8%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAA 115
L K+++ + D + + ++I CN+ I +R+T L P
Sbjct: 56 PDTLTKKVLRIIQDF-ENHDIFRTMIYCNSLSAAIDIGYIRNT--QTRSLVITPLDIYRN 112
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACGIKIKED 174
+ I++ + I +S + + +EE + I +
Sbjct: 113 LAARYKKIALWAANGQCLSAIEHIFYEQ-NPSIDIIGISMLPIVKAIEEDQSAASIIDQY 171
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
++ F ++L CTH P + + + +D ++
Sbjct: 172 DLVSLCVERFAPN------SLILGCTHLPYLQSELSKKI--SIPIIDPTEE 214
>gi|254173678|ref|ZP_04880350.1| aspartate racemase [Thermococcus sp. AM4]
gi|214032370|gb|EEB73200.1| aspartate racemase [Thermococcus sp. AM4]
Length = 234
Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 64/196 (32%), Gaps = 23/196 (11%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVP 109
G L L+ + ++ CNTA I+ +R + + V
Sbjct: 57 GPDPRPELIDSAKK-----LESWGADFIIMPCNTAHFFAETIQRAIR-----IPLVSMVE 106
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
+ + +L+T T++ + + + L R G+
Sbjct: 107 ETAERVKEMGLRKVGLLATDGTVKGLVYHRALLKRGISIAVPGKNDQRLVMR--GIYEGV 164
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIA 227
K E+ +E+ +K KR + I+ CT V L P V +D D IA
Sbjct: 165 KAGNLELGRELLLKVAKKLEKRVEGIIAGCT------EVSVALRPEDLSVPLIDPMDVIA 218
Query: 228 RRARCLLPRINTHQTR 243
+A L + + R
Sbjct: 219 EKAVKLALGLEELRAR 234
>gi|48243626|gb|AAT40775.1| putative aspartate racemase [Haemophilus influenzae]
Length = 230
Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 22/167 (13%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ +IACNTA DEL+ I + ++ I IL+T AT
Sbjct: 71 LENAGAKCILIACNTA-HYWYDELKEKCHVDMLNIIDSTINEVLQMGKTK-IGILATDAT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK----IKEDEIKKEIEGCFIEK 187
L + Y + ++ E ++ K EI+K E I++
Sbjct: 129 LATKLYQKTLEKY-------GLICLLPNE--EHQKSVMESIYLYKSGEIQKAEELMLIQR 179
Query: 188 EG---KRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++VI+L CT PL + + R+ P+ + D++ ++ R A
Sbjct: 180 DELIRHGSEVIILGCTEIPLILKNAMRE---QPILYEDSTAALVRAA 223
>gi|229169488|ref|ZP_04297193.1| amino-acid racemase [Bacillus cereus AH621]
gi|228613987|gb|EEK71107.1| amino-acid racemase [Bacillus cereus AH621]
Length = 224
Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 19/177 (10%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAA 116
A+KK ++ L+ + CNTA L +EL+ + ++ L V +K
Sbjct: 57 EAMKKAIIEGAQK-LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPE 113
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T+ ++I++T AT++ + I I V + + + IK E E
Sbjct: 114 NTK--RVAIIATEATVQAGIYQDGIAKRN----IEYVHNEQWQEMINQIISCIKGGEIEE 167
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+++ + + D ++ACT + ++D++ +A+ +
Sbjct: 168 ARKLWSVLVLQLKDEVDTAIIACT-------DLNVVVSED--FVDSAQCLAKAVVRM 215
>gi|227545204|ref|ZP_03975253.1| aspartate racemase [Lactobacillus reuteri CF48-3A]
gi|300909118|ref|ZP_07126579.1| aspartate racemase [Lactobacillus reuteri SD2112]
gi|227184813|gb|EEI64884.1| aspartate racemase [Lactobacillus reuteri CF48-3A]
gi|300892983|gb|EFK86342.1| aspartate racemase [Lactobacillus reuteri SD2112]
Length = 239
Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 47/136 (34%), Gaps = 23/136 (16%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS-GLISILSTPATLR 133
P V+ CNTA D+L++ + L + + + + +L+T TL
Sbjct: 76 NPAFFVLICNTA-HYSFDKLQAA-TEIPILNMLQETVNEIKKIKPDAKRVGLLATKGTLA 133
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIKEDEIKKEIEGCF 184
I + + + +A E+ K + ++K IE
Sbjct: 134 ANLYDPYIEKAGYEL---IKPTPEIADMTEDLIYHDIKEAGHSDGKKYHELVRKMIEE-- 188
Query: 185 IEKEGKRTDVIVLACT 200
+ DV+VL CT
Sbjct: 189 -----QGADVVVLGCT 199
>gi|306479723|emb|CBV35969.1| glutamate racemase [Helicobacter pylori]
Length = 84
Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 8/82 (9%)
Query: 192 TDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 3 PEVIILGCTHFPLIAQKIESYFMGHFSLPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAF 60
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 61 PKVEFHASGDVIWLEKQAKEWL 82
>gi|11499017|ref|NP_070251.1| aspartate racemase [Archaeoglobus fulgidus DSM 4304]
gi|2649148|gb|AAB89824.1| aspartate racemase [Archaeoglobus fulgidus DSM 4304]
Length = 225
Score = 54.6 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 8/149 (5%)
Query: 62 KRLMFLFSDI---LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
RL + DI L+ +I NT + + + + + +A
Sbjct: 56 DRLGEILGDIAVKLENAGAKAVLICTNTMHKVA--DAVEKRIGIPLINIIDVTAEALKGD 113
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEI 176
+L T T+ + + + + + A S + + C I+E+
Sbjct: 114 GVKKAGLLGTKFTMEDGFYQERMKKHGIEVIVPEKEEDRNAIHSIIFDELCLGIIREES- 172
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
++ + E + + + I+L CT PLI
Sbjct: 173 ERRLRKIVDELKERGAEGIILGCTELPLI 201
>gi|293557294|ref|ZP_06675840.1| aspartate racemase [Enterococcus faecium E1039]
gi|293568099|ref|ZP_06679436.1| aspartate racemase [Enterococcus faecium E1071]
gi|294616494|ref|ZP_06696275.1| aspartate racemase [Enterococcus faecium E1636]
gi|294617425|ref|ZP_06697059.1| aspartate racemase [Enterococcus faecium E1679]
gi|291589181|gb|EFF20992.1| aspartate racemase [Enterococcus faecium E1071]
gi|291590642|gb|EFF22370.1| aspartate racemase [Enterococcus faecium E1636]
gi|291596331|gb|EFF27590.1| aspartate racemase [Enterococcus faecium E1679]
gi|291600546|gb|EFF30852.1| aspartate racemase [Enterococcus faecium E1039]
Length = 243
Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 29/184 (15%)
Query: 66 FLFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122
FL DI + QP V+ CNTA +EL++ + L A + +G
Sbjct: 64 FLLDDIEKQNLLQPNFIVLTCNTA-HYFFEELQAA-TDIPILHMPREAANELVRQHTTGR 121
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++IL T +++ + + + ++ +L ++ + D + +E+
Sbjct: 122 VAILGTEGSMKAGIYEREVKNLGFE---TVIPDTVLQEKINYLIYHEIKESDYLNQELYY 178
Query: 183 CFIEK--EGKRTDVIVLACT------------HYP------LIVH-VFRQLSPWPVDWLD 221
+E+ E + ++L CT HYP ++ + LD
Sbjct: 179 EILEEAVERLNCEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAERSKALD 238
Query: 222 NSDS 225
+
Sbjct: 239 TASE 242
>gi|24378582|ref|NP_720537.1| putative amino acid recemase [Streptococcus mutans UA159]
gi|24376434|gb|AAN57843.1|AE014857_7 putative amino acid recemase [Streptococcus mutans UA159]
Length = 230
Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 50/139 (35%), Gaps = 2/139 (1%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + L++ VI NT + +++ ++ L A +A
Sbjct: 61 AEVLSQIAQKLEQAGADFIVICTNTMHKVA-PQIQKQI-AIPILHIAQATAEAILENGIQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T+ + + + + I + + +R+ + +D K+
Sbjct: 119 KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGITEVNRIIYDELCLGDIKDSSKQTYL 178
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ + +V++L CT
Sbjct: 179 TIIDDLKKAGAEVVILGCT 197
>gi|302336070|ref|YP_003801277.1| aspartate racemase [Olsenella uli DSM 7084]
gi|301319910|gb|ADK68397.1| aspartate racemase [Olsenella uli DSM 7084]
Length = 247
Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 56/178 (31%), Gaps = 24/178 (13%)
Query: 68 FSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQ--AAAYTQSGL 122
+ L IACNTA + I D + + + + + A G
Sbjct: 69 VARWLQDAGADYLAIACNTAHYFYAAIDDAV-----DIPVVNIMEETSRHIAEKVGHGGR 123
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +++T T+R + +C H ++S + + + +I
Sbjct: 124 VGLMATEGTVRSEVFQGYFKAMGLECVHPDEADQAQVSSLIYDGVKANADYDPGDLLDIA 183
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVF-RQLSPWPVD-----WLDNSDSIARRARCL 233
G G D +V CT L V + L D+ D +A R L
Sbjct: 184 GRL---RGAGCDAVVCGCT--EL--SVIYQDLLDDKTQTVPCWLFDSLDILAERCVQL 234
>gi|306480324|emb|CBV36548.1| glutamate racemase [Helicobacter pylori]
Length = 84
Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 8/82 (9%)
Query: 192 TDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI P P + + D+I + T F
Sbjct: 3 PEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNTHAF 60
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 61 PKVEFHASGDVIWLEKQAKEWL 82
>gi|239814554|ref|YP_002943464.1| aspartate racemase [Variovorax paradoxus S110]
gi|239801131|gb|ACS18198.1| aspartate racemase [Variovorax paradoxus S110]
Length = 245
Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 25/141 (17%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L IACNTA L+ FP + L + + A +G +++++T T
Sbjct: 83 LAALGSQAVAIACNTAHAW-HARLQERFPQVELLHMAREVARHLAAQGTGSVALMATEGT 141
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE------------YACGIKIKEDEIKKE 179
R + CH+ EE A +++ E +
Sbjct: 142 YRVRLYEQALAEAGLDCHV---------PLAEERRIITRGIFDGVKAGNMQLAEACFSQV 192
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
E+ G I++ CT
Sbjct: 193 ALR-LAERHGPV--TIIMGCT 210
>gi|306479990|emb|CBV36226.1| glutamate racemase [Helicobacter pylori]
Length = 94
Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 26/92 (28%), Gaps = 8/92 (8%)
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235
+ +V++L CTH+PLI H + + D+I +
Sbjct: 3 RYYFAPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--K 60
Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 61 YALKKNACAFPKVEFHASGDVIWLEKQAKEWL 92
>gi|206977308|ref|ZP_03238205.1| probable amino-acid racemase [Bacillus cereus H3081.97]
gi|206744459|gb|EDZ55869.1| probable amino-acid racemase [Bacillus cereus H3081.97]
Length = 224
Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLQAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK + E
Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQDMINQIITYIKSGKVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+E+ + + + D ++ACT
Sbjct: 169 RELWNALVLQLREEVDTAIIACT 191
>gi|187478383|ref|YP_786407.1| aspartate racemase [Bordetella avium 197N]
gi|115422969|emb|CAJ49499.1| aspartate racemase [Bordetella avium 197N]
Length = 243
Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 14/164 (8%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILS 127
+L+ + CNTA + E + L + A+ Q G I ++
Sbjct: 73 RMLNASGARAIAVPCNTA--HLWYEQMAAASDCEVLHIIEAVAQDLRRQGIHRGRIGLMG 130
Query: 128 TPATLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T ATL + + C + + ++ +AS A E+ +E C
Sbjct: 131 TAATLSMGLYQQTLEKHGYTCIVPTEEEIDTLCMASI---RAVKANQLEESFAPAVE-CI 186
Query: 185 IEKEGKRTDVIVLACTHYPLIVH-VFRQLSPWPVDWLDNSDSIA 227
+ D +VL CT PL V R+ P+ D+ D++A
Sbjct: 187 QRLRTRGADAVVLGCTELPLAVPHALRKGLGIPLT--DSIDALA 228
>gi|229093861|ref|ZP_04224955.1| amino-acid racemase [Bacillus cereus Rock3-42]
gi|228689540|gb|EEL43351.1| amino-acid racemase [Bacillus cereus Rock3-42]
Length = 230
Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 63 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 119
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK E E
Sbjct: 120 TA-KRVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINQIISYIKGGEIEKA 174
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
E+ + + D ++ACT
Sbjct: 175 HELWNTLVLQLRDEVDTAIIACT 197
>gi|292494120|ref|YP_003533263.1| aspartate racemase [Haloferax volcanii DS2]
gi|291369140|gb|ADE01370.1| aspartate racemase [Haloferax volcanii DS2]
Length = 245
Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 44/169 (26%), Gaps = 16/169 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ V+A NT + S+ FL V A A + +L T AT
Sbjct: 81 LEAGGADFVVMATNTMHRVAPRI--EAALSIPFLHIVDAAADAILADGLETVGVLGTRAT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + S R+ + + + +
Sbjct: 139 MDGAFYRERFEEHGIDVIVPEESRRDEIDRIVFEELTKGEIREASRDYYLKAVDQLVERG 198
Query: 192 TDVIVLACTHYPLIVHVFRQLSP----WPVDWLDNSDSIARRARCLLPR 236
D IVL CT L V D A + R
Sbjct: 199 ADGIVLGCT-------EIELLVEQADRPDVPLFDT---TALHVERAVER 237
>gi|229181072|ref|ZP_04308405.1| amino-acid racemase [Bacillus cereus 172560W]
gi|228602400|gb|EEK59888.1| amino-acid racemase [Bacillus cereus 172560W]
Length = 224
Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+++L+T AT++ + I I + + + IK E E
Sbjct: 114 NI-KRVALLATEATVQSRIYQDGITKRN----IEYIHHEKWQESINQIITCIKSGEIEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+E+ + + + D +++ACT
Sbjct: 169 RELWNALVLQLREEVDTVIIACT 191
>gi|229062440|ref|ZP_04199756.1| amino-acid racemase [Bacillus cereus AH603]
gi|228716911|gb|EEL68598.1| amino-acid racemase [Bacillus cereus AH603]
Length = 224
Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + CNTA L +EL+ + ++ L V +K T++ +++L+T A
Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPENTKT--VALLATEA 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I I V + + + IK E E +++ + +
Sbjct: 126 TVQAGIYQDGIAKRN----IEYVHNEQWQEMINQIISCIKGGEIEEARKLWSLLVLQLKD 181
Query: 191 RTDVIVLACT 200
D ++ACT
Sbjct: 182 EVDTAIIACT 191
>gi|227327191|ref|ZP_03831215.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 238
Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 8/162 (4%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
IL+ +I CNTA ++L+ + + + QA + + + +L+T
Sbjct: 69 KILENAGAECIIIPCNTA-HYWFNDLKQQCRA-EMISIIDVTCQAIKHANTTRVGLLATT 126
Query: 130 ATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ R Y NLI + + + Y G + ++ ++
Sbjct: 127 ATVKARIYQDNLITDNIDCYTPDDADQHQVMESIYAYKSGDIAGAYSLLSPVKDRLLQ-- 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ I+L CT PLI+ +++ P ++D ++ + ++
Sbjct: 185 -AGVEKIILGCTELPLILE--QEVRTSPQHYVDATEELIKKT 223
>gi|324328651|gb|ADY23911.1| aspartate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 224
Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + S+ L V QA +++L+T AT
Sbjct: 70 LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPKN-VKRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I I + + + IK E E +E+ + K +
Sbjct: 127 VQAGIYQDGITKRD----IEYIHHETWQEMINQIITWIKSGEIEEARELWNALVLKLREE 182
Query: 192 TDVIVLACT 200
D ++ACT
Sbjct: 183 VDTAIIACT 191
>gi|30022823|ref|NP_834454.1| aspartate racemase [Bacillus cereus ATCC 14579]
gi|229130032|ref|ZP_04258996.1| amino-acid racemase [Bacillus cereus BDRD-Cer4]
gi|29898382|gb|AAP11655.1| Aspartate racemase [Bacillus cereus ATCC 14579]
gi|228653476|gb|EEL09350.1| amino-acid racemase [Bacillus cereus BDRD-Cer4]
Length = 224
Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQDSL-SIPILHIVDETLQAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK E E
Sbjct: 114 TA-KRVALLATEATVQADIYQDGIAKRN----IEYIHHETWQEMINQIITCIKSGEIEKA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
E+ + + + D ++ACT
Sbjct: 169 HELWNALVLQLREEVDTAIIACT 191
>gi|293402558|ref|ZP_06646693.1| aspartate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304072|gb|EFE45326.1| aspartate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 231
Score = 53.8 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 57/155 (36%), Gaps = 12/155 (7%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L++ L +I CNT DE + + + + IL+T
Sbjct: 70 HLLNQIGVKLILIPCNT-SHFFYDEFQ-KVSHAPIYHLIDHTTERLKKEGIKRVGILATD 127
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRV-EEYACGIKIKEDEIKKEIEGCFIEK 187
T++ S + I + S + ++ G I +D++ I+ E
Sbjct: 128 GTIKSQLYQKSCESQQLEWVIPNQENQQHVMSLIYDDIKAGKPIHKDKLISIIK----EM 183
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
E ++ + ++LACT ++ R+ ++D
Sbjct: 184 EEQQVERMILACTELSILKE--REQLDE--RFVDP 214
>gi|47565179|ref|ZP_00236222.1| aspartate racemase, putative [Bacillus cereus G9241]
gi|47557965|gb|EAL16290.1| aspartate racemase, putative [Bacillus cereus G9241]
Length = 224
Score = 53.8 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 57 EAMKKAIIEGAQK-LESTGVEFIAMPCNTA-HLYFEELQRSL-SVPILNIVDETLQAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +++L+T AT++ + I I + + + IK E E
Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHHETWQEMINQIITCIKSGEIEKA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
E+ + + D ++ACT
Sbjct: 169 HELWNTLVLQLRDEVDTAIIACT 191
>gi|306479879|emb|CBV36120.1| glutamate racemase [Helicobacter pylori]
Length = 100
Score = 53.8 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 27/98 (27%), Gaps = 8/98 (8%)
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARR 229
I + + +V++L CTH+PLI + + D+I
Sbjct: 3 IVRTCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEY 62
Query: 230 ARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ F SG ++ +
Sbjct: 63 LQQ--KYALKKNACAFPKVEFHASGDVIWLEKQAKEWL 98
>gi|167622930|ref|YP_001673224.1| aspartate racemase [Shewanella halifaxensis HAW-EB4]
gi|167352952|gb|ABZ75565.1| aspartate racemase [Shewanella halifaxensis HAW-EB4]
Length = 230
Score = 53.8 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 48/163 (29%), Gaps = 13/163 (7%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + + +I NT + DE+++ S+ L A +
Sbjct: 63 ILSAAAKNVAAGGADFLLICTNTMHKVA-DEIQAQL-SIPILHIADATAAKLLANGVTKV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T+ + + LI+ + + + + V + K++
Sbjct: 121 GLLGTRFTMEQDFYKSRLINQFGIDVIVPNEAERNVVHHVIYDELCRGVINPASKQQYLD 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222
+ + ++L CT L V D
Sbjct: 181 IVNDLHAQGAQAVILGCT-------EIALLIGQQDTQVPLYDT 216
>gi|325283629|ref|YP_004256170.1| Asp/Glu/hydantoin racemase [Deinococcus proteolyticus MRP]
gi|324315438|gb|ADY26553.1| Asp/Glu/hydantoin racemase [Deinococcus proteolyticus MRP]
Length = 224
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 10/115 (8%)
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++ A+ L+H+ + + + + LA VE+ + E+
Sbjct: 114 GVMAANASGHAGIERTLLHA-NPELRLIQFAQLDLADAVEQGRSPQDTVQAFHLAELTSL 172
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW--PVDWLDNSDSIARRARCLLPR 236
+ I+L CTH+P F PV LD + + ++ L
Sbjct: 173 LSRL---GAEAIILGCTHFP----AFGAALAPLSPVPLLDPAGEMWQQLAAQLEH 220
>gi|50120232|ref|YP_049399.1| putative aspartate/glutamate racemase [Pectobacterium atrosepticum
SCRI1043]
gi|49610758|emb|CAG74203.1| putative aspartate/glutamate racemase [Pectobacterium atrosepticum
SCRI1043]
Length = 236
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 15/162 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VI NT + + R++ + L A + + +L T T
Sbjct: 73 LRQAGADAIVICTNTMHKVADEVERAS--QLPLLHIADATGASLKQHGLKKVGLLGTRYT 130
Query: 132 LRRTYTSNLI-HSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEK 187
+ + + I + + + L +R+ E I ++ +EI ++
Sbjct: 131 MEQDFYRQRIQERFSVDVIVPDQTGKELVNRIIYDELCLGNINDTSRQVYREIIQQLEQQ 190
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD--SIA 227
+ +L CT PL++ V D S +IA
Sbjct: 191 GAEGI---ILGCTEIPLLIG----AGDATVPLFDTSYLHAIA 225
>gi|229135597|ref|ZP_04264377.1| amino-acid racemase [Bacillus cereus BDRD-ST196]
gi|228647870|gb|EEL03925.1| amino-acid racemase [Bacillus cereus BDRD-ST196]
Length = 217
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + CNTA L +EL+ + ++ L V +K T+ +++L+T A
Sbjct: 63 LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPENTK--RVALLATEA 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + + I I + + + + IK E E +++ + +
Sbjct: 119 TVQASIYQDGITKRD----IEYIHNEQWQEMINQIITCIKGGEIEEARKLWSLLVLQLKD 174
Query: 191 RTDVIVLACT 200
D ++ACT
Sbjct: 175 EIDTAIIACT 184
>gi|171321276|ref|ZP_02910240.1| aspartate racemase [Burkholderia ambifaria MEX-5]
gi|171093448|gb|EDT38627.1| aspartate racemase [Burkholderia ambifaria MEX-5]
Length = 233
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 10/169 (5%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L++ + I CNTA LR ++ L V A A +++L+T
Sbjct: 69 LLNRCGVDVIAIPCNTA-HHWYAPLRER-SAVPILHIVDASVAALPA-GLRRVAVLATGG 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSS-MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + + + + V++ + + + G + +
Sbjct: 126 TLVSGLYQAALRARGFEPVMPGVAAQRDIVACIAAVKAGKIDAS---ARCLTRALATLAR 182
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ V V+ CT P+ R P +D++ +AR
Sbjct: 183 RDVGVAVMGCTEIPIAARALRDA---PFALIDSTQELARATVAYAAERG 228
>gi|116514821|ref|YP_813727.1| aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116094136|gb|ABJ59289.1| Aspartate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
Length = 249
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127
K P V+ CNTA D+L + + FL ++ A + S I +++
Sbjct: 73 AKLGPDFMVMPCNTA-HYFYDDL-AALTDIPFLHM---MRIAVHQYVDQFPNSPKIGLIA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T ++ + IH + + + V E ++ + KE+ + K
Sbjct: 128 TEGSIYDHLYEDEIHRVGREVE---FGGLEIQPMVTELIYRDIKEKGIVDKELYHEILRK 184
Query: 188 --EGKRTDVIVLACT 200
+ DVI+L CT
Sbjct: 185 MHDEYGCDVILLGCT 199
>gi|75763381|ref|ZP_00743116.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74489131|gb|EAO52612.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 235
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT
Sbjct: 81 LESTGVSFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPEN-TKRVALLATEAT 137
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I I + + + IK E E +E+ + +
Sbjct: 138 VQARIYQDGIAKRN----IEYIHHEKWQESINQIITCIKSGEIEEARELWNTLVLQLRDE 193
Query: 192 TDVIVLACT 200
D ++ACT
Sbjct: 194 IDTAIIACT 202
>gi|217962242|ref|YP_002340812.1| probable amino-acid racemase [Bacillus cereus AH187]
gi|229141490|ref|ZP_04270026.1| amino-acid racemase [Bacillus cereus BDRD-ST26]
gi|217067288|gb|ACJ81538.1| probable amino-acid racemase [Bacillus cereus AH187]
gi|228641975|gb|EEK98270.1| amino-acid racemase [Bacillus cereus BDRD-ST26]
Length = 224
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK + E
Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQDMINQIITYIKSGKVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+E+ + + + D ++ACT
Sbjct: 169 RELWNALVLQLREEVDTAIIACT 191
>gi|229124324|ref|ZP_04253514.1| amino-acid racemase [Bacillus cereus 95/8201]
gi|228659147|gb|EEL14797.1| amino-acid racemase [Bacillus cereus 95/8201]
Length = 224
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 69/176 (39%), Gaps = 17/176 (9%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L DEL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFDELQQSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I + + + + IK E E
Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRNIEYTHYEQ----WQESINQIITYIKSGEVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+E+ + + D ++ACT ++ D++D++ +A+ +
Sbjct: 169 RELWSALVLQLKDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVRM 215
>gi|229198914|ref|ZP_04325604.1| amino-acid racemase [Bacillus cereus m1293]
gi|228584551|gb|EEK42679.1| amino-acid racemase [Bacillus cereus m1293]
Length = 224
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK + E
Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQDMINQIITYIKSGKVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+E+ + + + D ++ACT
Sbjct: 169 RELWNALVLQLREEVDTAIIACT 191
>gi|126649551|ref|ZP_01721792.1| aspartate racemase [Bacillus sp. B14905]
gi|126593876|gb|EAZ87799.1| aspartate racemase [Bacillus sp. B14905]
Length = 233
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 46/137 (33%), Gaps = 20/137 (14%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + I CNTA T DE++ P + L + K+A+ + IL+T
Sbjct: 73 LASVGADMIAIPCNTAHTF-YDEIQEGSP-IPVLHMIRETAKRASELGAE-RVGILATTG 129
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-------EIEGC 183
TL + + Y + E A + I D +K + +
Sbjct: 130 TLTSRMYQDALEEY---------GITPVVPDNEMRAHVMTIIYDYVKAGKNVTQDDWQPI 180
Query: 184 FIEKEGKRTDVIVLACT 200
D +VL CT
Sbjct: 181 EDAMLALNCDRLVLGCT 197
>gi|253582499|ref|ZP_04859721.1| aspartate racemase [Fusobacterium varium ATCC 27725]
gi|251835644|gb|EES64183.1| aspartate racemase [Fusobacterium varium ATCC 27725]
Length = 230
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 11/149 (7%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ L + + L+K VI NT + +++ S+ L A
Sbjct: 58 DKSAEILTE-----AAQNLEKAGADFIVICTNTMHKIA-PDIQEKI-SIPILHIAEATAD 110
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKI 171
+++L T T+ + + N + + + +RV EE G +
Sbjct: 111 ELDKKNIKKVALLGTKYTMEQDFYKNKLVDRGIEVIVPDAEDRAEVNRVIYEELCLGNIV 170
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ KK + ++L CT
Sbjct: 171 ADS--KKRFLDIMKSLVKEGAQGVILGCT 197
>gi|170703014|ref|ZP_02893844.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170132072|gb|EDT00570.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 233
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 8/168 (4%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L++ + I CN+A LR + L V A A +++L+T
Sbjct: 69 LLNRCGVDVIAIPCNSA-HHWYAPLRER-SAAPVLHIVDASVAAVPA-GVRRVAVLATGG 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL + + + + + V++ + KI + + +
Sbjct: 126 TLVSGFYQAALRARGFEPVMPAVAAQRDIAACIAAVKAGKIDASV--RRLSRALATLARR 183
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
V V+ CT PL V R P +D++ +AR
Sbjct: 184 DVGVAVMGCTEIPLAARVLRDA---PFALIDSTQELARATVAYAAERG 228
>gi|269138277|ref|YP_003294977.1| putative aspartate racemase [Edwardsiella tarda EIB202]
gi|267983937|gb|ACY83766.1| putative aspartate racemase [Edwardsiella tarda EIB202]
gi|304558313|gb|ADM40977.1| Putative aspartate racemase [Edwardsiella tarda FL6-60]
Length = 239
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 4/129 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ VI CNTA DELR + + L V A + I +L+T AT
Sbjct: 71 LEQAGAECIVIPCNTA-HFWFDELRQSC-HVELLNIVEATLNEVCASGQHHIGLLATNAT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L I ++ +C +E + ++ +E +
Sbjct: 129 LYMGLYQQAIEAHGLRCIAPDREGQEQV--MESIYALKAGDAEHARRLMERQADALFARG 186
Query: 192 TDVIVLACT 200
+IVL CT
Sbjct: 187 AQIIVLGCT 195
>gi|253687770|ref|YP_003016960.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754348|gb|ACT12424.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 238
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 61/161 (37%), Gaps = 6/161 (3%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
IL+ +I CNTA +EL+ + + + QA + + + +L+T
Sbjct: 69 KILENAGAECIIIPCNTA-HYWFNELKQQCRA-EMISIIDVTCQAIKHANTTRVGLLATT 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ + + + +C + +E + +
Sbjct: 127 ATVKARIYQDNLITDNIECFTPNDADQHQV--MESIYAYKSGDIAGAYRMLSPVKDRLLH 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ I+L CT PLI+ +++ P ++D ++ + ++
Sbjct: 185 AGVEKIILGCTELPLILE--QEVKTSPQHYVDATEELIKKT 223
>gi|218899907|ref|YP_002448318.1| probable amino-acid racemase [Bacillus cereus G9842]
gi|218545086|gb|ACK97480.1| probable amino-acid racemase [Bacillus cereus G9842]
Length = 224
Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT
Sbjct: 70 LESTGVSFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPEN-TKRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I I + + + IK E E +E+ + +
Sbjct: 127 VQARIYQDGIAKRN----IEYIHHEKWQESINQIITCIKSGEIEEARELWNTLVLQLRDE 182
Query: 192 TDVIVLACT 200
D ++ACT
Sbjct: 183 IDTAIIACT 191
>gi|228903273|ref|ZP_04067405.1| amino-acid racemase [Bacillus thuringiensis IBL 4222]
gi|228856374|gb|EEN00902.1| amino-acid racemase [Bacillus thuringiensis IBL 4222]
Length = 224
Score = 53.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT
Sbjct: 70 LESTGVSFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPEN-TKRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I I + + + IK E E +E+ + +
Sbjct: 127 VQARIYQDGIAKRN----IEYIHHEKWQESINQIITCIKSGEIEEARELWNTLVLQLRDE 182
Query: 192 TDVIVLACT 200
D ++ACT
Sbjct: 183 IDTAIIACT 191
>gi|225574246|ref|ZP_03782856.1| hypothetical protein RUMHYD_02310 [Blautia hydrogenotrophica DSM
10507]
gi|225038536|gb|EEG48782.1| hypothetical protein RUMHYD_02310 [Blautia hydrogenotrophica DSM
10507]
Length = 236
Score = 53.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 5/130 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + ++ CNTA K L F + FL + AA +L+T T
Sbjct: 71 LEGMGADVLIMPCNTAHYFYKKLLP--FVDIPFLNMLEETADAAVKMGITKAGLLATDGT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
++ + + + D K+ E + +
Sbjct: 129 VKSGVYEKAFQERGISLELPAKEEQESVMELIYDGVKAGNYSLD--TKKFERAMDKLLQR 186
Query: 191 RTDVIVLACT 200
V+VL CT
Sbjct: 187 GAQVLVLGCT 196
>gi|229013961|ref|ZP_04171086.1| amino-acid racemase [Bacillus mycoides DSM 2048]
gi|228747334|gb|EEL97212.1| amino-acid racemase [Bacillus mycoides DSM 2048]
Length = 224
Score = 53.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 63/162 (38%), Gaps = 16/162 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + ++ L V +A + +++L+T AT
Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPEN-TKRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + I I + + + + IK E E +++ + +
Sbjct: 127 VQASIYQDGITKRD----IEYIHNEQWQEMINQIITCIKGGEIEEARKLWSLLVLQLKDE 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT + ++D++ +A+ +
Sbjct: 183 VDTAIIACT-------DLNVVVSED--FVDSAQCLAKAVVRI 215
>gi|269836715|ref|YP_003318943.1| aspartate racemase [Sphaerobacter thermophilus DSM 20745]
gi|269785978|gb|ACZ38121.1| aspartate racemase [Sphaerobacter thermophilus DSM 20745]
Length = 247
Score = 53.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 13/165 (7%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP--AIKQAAAYTQSGLISILSTP 129
L+ VI CNTA +R ++ + + A + AA + IL+T
Sbjct: 73 LEGAGASFIVIPCNTAHAF-LGAVRDAV-AIPIISMIDETAAEVAALLPRGAAAGILATS 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + + + + + + + +K + + E
Sbjct: 131 GTVSAGLYQDALAAAGLRALVPSPDAQAQVMAAIAAVKAGDLSRATTEKALVAAY-ELIE 189
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIARRARC 232
+ ++ ACT PLI+ P V +D + +AR A
Sbjct: 190 QGAGALLAACTELPLILQ------PNDIPVPLIDPTAVLARAAVR 228
>gi|196041448|ref|ZP_03108741.1| probable amino-acid racemase [Bacillus cereus NVH0597-99]
gi|196027696|gb|EDX66310.1| probable amino-acid racemase [Bacillus cereus NVH0597-99]
Length = 224
Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK E E
Sbjct: 114 TA-KRVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINQIISYIKGGEIEKA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D ++ACT
Sbjct: 169 RKLWNALVLQLRDEVDTAIIACT 191
>gi|317053843|ref|YP_004117868.1| aspartate racemase [Pantoea sp. At-9b]
gi|316951838|gb|ADU71312.1| aspartate racemase [Pantoea sp. At-9b]
Length = 230
Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ V+ NT L + ++ L A + +L+T T
Sbjct: 71 LERGGADFIVLCTNTMHKLAAQITAAV--NIPLLHIADATAARIRQAGVKRVGLLATGFT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + L Y + + + + + + I +E + + +
Sbjct: 129 MEQDFYKGRLQQEYGIEVLVPAATQRKVVHDIIYQELCLGIIREESRAHYREIIAQLVAE 188
Query: 191 RTDVIVLACT 200
+ I+L CT
Sbjct: 189 GAEAIILGCT 198
>gi|306480447|emb|CBV36666.1| glutamate racemase [Helicobacter pylori]
Length = 93
Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 28/93 (30%), Gaps = 10/93 (10%)
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRA-RCLL 234
+ +VI+L CTH+PLI + + D+I +
Sbjct: 2 RYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHSGDAIVEYLQKNYA 61
Query: 235 PRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ N H F SG ++ +
Sbjct: 62 LKKNAHA---FPKVEFHASGDVIWLEKQAKEWL 91
>gi|163942483|ref|YP_001647367.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
gi|163864680|gb|ABY45739.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
Length = 224
Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 63/162 (38%), Gaps = 16/162 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + ++ L V +A + +++L+T AT
Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPEN-TKRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + I I + + + + IK E E +++ + +
Sbjct: 127 VQASIYQDGITKRD----IEYIHNEQWQEMINQIITCIKGGEIEEARKLWSLLVLQLKDE 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT + ++D++ +A+ +
Sbjct: 183 VDTAIIACT-------DLNVVVSED--FVDSAQCLAKAVVRI 215
>gi|229072257|ref|ZP_04205463.1| amino-acid racemase [Bacillus cereus F65185]
gi|229082009|ref|ZP_04214498.1| amino-acid racemase [Bacillus cereus Rock4-2]
gi|228701308|gb|EEL53805.1| amino-acid racemase [Bacillus cereus Rock4-2]
gi|228710865|gb|EEL62834.1| amino-acid racemase [Bacillus cereus F65185]
Length = 224
Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T + +++L+T AT++ + I I + + + + IK E E
Sbjct: 114 T-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D ++ACT
Sbjct: 169 RKLWNALVVQLKDEVDTAIIACT 191
>gi|228967857|ref|ZP_04128869.1| amino-acid racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228791823|gb|EEM39413.1| amino-acid racemase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 224
Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT
Sbjct: 70 LESTGVSFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPEN-TKRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I I + + + K E E +E+ + +
Sbjct: 127 VQARIYQDGIAKRN----IEYIHHEKWQESINQIITCSKSGEIEEARELWNTLVLQLRDE 182
Query: 192 TDVIVLACT 200
D ++ACT
Sbjct: 183 IDTAIIACT 191
>gi|169825878|ref|YP_001696036.1| aspartate racemase [Lysinibacillus sphaericus C3-41]
gi|168990366|gb|ACA37906.1| Aspartate racemase [Lysinibacillus sphaericus C3-41]
Length = 233
Score = 52.6 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 45/135 (33%), Gaps = 16/135 (11%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + I CNTA T DE+++ P + L + K+A+ + IL+T
Sbjct: 73 LASVGADMIAIPCNTAHTF-YDEIQAGSP-IPVLHMIRETAKRASELGAE-RVGILATTG 129
Query: 131 TLRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
TL + Y V + I+ V+ + I+
Sbjct: 130 TLTSRMYQEALEEYGITPVVPDNEMRAHVMTIIYDFVKAGKDVTQDDWQPIEDA------ 183
Query: 186 EKEGKRTDVIVLACT 200
D IVL CT
Sbjct: 184 -MLALNCDRIVLGCT 197
>gi|227115199|ref|ZP_03828855.1| aspartate racemase [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 238
Score = 52.6 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 58/161 (36%), Gaps = 6/161 (3%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
IL+ +I CNTA ++L+ + + + QA + + +L+T
Sbjct: 69 KILENAGAECIIIPCNTA-HYWFNDLKKQCRA-EMISIIDVTCQAIKNANTTRVGLLATT 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ + + + + +E D +
Sbjct: 127 ATVKARIYQDNLTT--DNIECYTPDDADQHQVMESIYAYKSGDIDRAYSLLSPVKDRLLQ 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ I+L CT PLI+ +++ P ++D ++ + ++
Sbjct: 185 AGVEKIILGCTELPLILE--QEVKTSPQHYVDATEELIKKT 223
>gi|158319598|ref|YP_001512105.1| aspartate racemase [Alkaliphilus oremlandii OhILAs]
gi|158139797|gb|ABW18109.1| aspartate racemase [Alkaliphilus oremlandii OhILAs]
Length = 234
Score = 52.6 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 23/171 (13%)
Query: 35 LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA---FTLI 91
+P+ V D G+ L K L+ ++ CNTA + I
Sbjct: 45 AIPDRTAYLVGD------GDNPLEELVKSAKR-----LENMGADFLIMPCNTAHYFYQEI 93
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ-CHI 150
KD + F +M V IK+ Y S + +L+T T++ + + ++
Sbjct: 94 KDVINIAFLNM-IEETVMHIKE--KYPTSKKVGLLATDGTVQSKIYDLYFNKENIEMINL 150
Query: 151 HLVSSMILASRVEEYACG-IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
S + + + G +I ++I I+ E +GK DV++L CT
Sbjct: 151 DENSQKSIMNIIYSVKAGKNQIPLEDIYSAID----ELKGKGADVVILGCT 197
>gi|57640439|ref|YP_182917.1| aspartate racemase [Thermococcus kodakarensis KOD1]
gi|57158763|dbj|BAD84693.1| aspartate racemase [Thermococcus kodakarensis KOD1]
Length = 232
Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 19/184 (10%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G L L+ + ++ CNTA E ++ + +
Sbjct: 58 GPDPRPELIASAKK-----LESWGADFIIMPCNTA--HFFAETIQRAINIPLVSMIEETA 110
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+ + +L+T T++ + + L + G+K
Sbjct: 111 KKIESMGLRKVGLLATDGTIKGMVYHRALLKRGIHIAVPNKKDQGLVMKA--IYEGVKAG 168
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSDSIARR 229
E+ +E+ +K +R++ I+ CT + V +D D IA R
Sbjct: 169 NLELGRELLLKVAKKLERRSEGIIAGCT-------EVSVVLKSEDLNVPLIDPMDVIAER 221
Query: 230 ARCL 233
A L
Sbjct: 222 AVKL 225
>gi|307700261|ref|ZP_07637301.1| aspartate racemase [Mobiluncus mulieris FB024-16]
gi|307614472|gb|EFN93701.1| aspartate racemase [Mobiluncus mulieris FB024-16]
Length = 237
Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 13/135 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-----GLISIL 126
L VI CNTA + L++ ++ + A + ++I+
Sbjct: 71 LQDAGAEFLVIPCNTAT----NFLQAVVEAVDIEVVNIVAETVAEIGRKNAGGIKRVAIM 126
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFI 185
+T T+ + + LV S+ L + G + +E+ G
Sbjct: 127 ATEGTIASEIYQETLQLAGYEA---LVPSVQLQKEISGIIYGYVKAGQPVSRELFFGIIN 183
Query: 186 EKEGKRTDVIVLACT 200
+ D ++ CT
Sbjct: 184 KLRQNEADAVICGCT 198
>gi|228961020|ref|ZP_04122648.1| amino-acid racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228798653|gb|EEM45638.1| amino-acid racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 224
Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT
Sbjct: 70 LESTGVSFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPEN-TKRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I I + + + + IK E E +++ + +
Sbjct: 127 VQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEKARKLWSALVGQLKDE 182
Query: 192 TDVIVLACT 200
D ++ACT
Sbjct: 183 VDTAIIACT 191
>gi|226314088|ref|YP_002773984.1| hypothetical protein BBR47_45030 [Brevibacillus brevis NBRC 100599]
gi|226097038|dbj|BAH45480.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 230
Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 5/138 (3%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
M L + L+ L V+ NT S+ FL A QA ++
Sbjct: 64 MALAAKSLEAAGADLIVLCTNTM--HKLAYAIEEATSLPFLHIADATAQAITNHGHKRVA 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIEG 182
+L+T T+ + + + + V + L L + + I +E K+ +
Sbjct: 122 LLATRFTMEQDFYTGRLRD-VHGLEVLLPDEQERTLVHEIIYNELCVGIIREESKRNYQA 180
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 181 IIERLVKEGAEAVILGCT 198
>gi|197117610|ref|YP_002138037.1| aspartate/glutamate racemase superfamily protein [Geobacter
bemidjiensis Bem]
gi|197086970|gb|ACH38241.1| aspartate/glutamate racemase superfamily protein [Geobacter
bemidjiensis Bem]
Length = 233
Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 15/155 (9%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
L+ L K + I+ NT ++ DE+++ P + + V A + A
Sbjct: 61 YLLTAKVKALQKAGADFAFISANTP-HVVFDEVQAKSP-IPLISIVTATLEKAKELGVKR 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS------MILASRVEEYACGIKIKEDEI 176
+ +L T T+ + + S + + L + +E + ++ +
Sbjct: 119 VGLLGTKFTMEENFFA-APFSAAGISVVIPQPADQQYIQEKLMTEIELGVFKDETRDGLL 177
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYP--LIVHVF 209
KE + D ++L CT P L+ F
Sbjct: 178 AVIGR----MKEQEHIDAVILGCTELPLILLKDEF 208
>gi|188585267|ref|YP_001916812.1| aspartate racemase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349954|gb|ACB84224.1| aspartate racemase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 244
Score = 52.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 11/139 (7%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-----KQAAAYTQSGL 122
+ L+ V+ CNTA +++ ++ F+ + K ++ G
Sbjct: 68 MAKRLENMGADFLVMPCNTA-HYFYKDIQDVV-NIPFVNMLECTARYINKLIGNDSKQGK 125
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIE 181
+ +L+T TL+ N + + + I L + G ++ +E
Sbjct: 126 VGLLATSGTLQTEIYQNQLSQFGFEV-ITPEPYQQLVMEAIYAVKAGDIGTS--TRELLE 182
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ E I++ CT
Sbjct: 183 KPIKQLENNGAKAIIMGCT 201
>gi|261821065|ref|YP_003259171.1| aspartate racemase [Pectobacterium wasabiae WPP163]
gi|261605078|gb|ACX87564.1| aspartate racemase [Pectobacterium wasabiae WPP163]
Length = 238
Score = 52.3 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 7/143 (4%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
IL+ +I CNTA +EL+ + + + QA + + +L+T
Sbjct: 69 KILENAGAECIIIPCNTA-HYWFNELKQQCRA-EMISIIDVTCQAIRSANTTRVGLLATT 126
Query: 130 ATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ R Y NLI+ + + + Y G + ++ ++
Sbjct: 127 ATVTARIYQDNLINDNIECYTPDEADQHQVMESIYAYKSGNIAGAYSMLSPVKDRLLQ-- 184
Query: 189 GKRTDVIVLACTHYPL-IVHVFR 210
+ I+L CT PL + +
Sbjct: 185 -AGVEKIILGCTELPLILEQEIK 206
>gi|228929809|ref|ZP_04092825.1| amino-acid racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228829866|gb|EEM75487.1| amino-acid racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 224
Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 69/176 (39%), Gaps = 17/176 (9%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK E E
Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+E+ + + D ++ACT ++ D++D++ +A+ +
Sbjct: 169 RELWSALVLQLKDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVRM 215
>gi|42783941|ref|NP_981188.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
gi|42739871|gb|AAS43796.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
Length = 225
Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + S+ L V Q +++L+T AT
Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQIIPKN-VKRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I I + + + IK E E +E+ + + +
Sbjct: 127 VQAGIYQDGITKRD----IEYIHHETWQEMINQIITYIKYGEVEEARELWNALVLQLREE 182
Query: 192 TDVIVLACT 200
D ++ACT
Sbjct: 183 VDTAIIACT 191
>gi|296505218|ref|YP_003666918.1| aspartate racemase [Bacillus thuringiensis BMB171]
gi|296326270|gb|ADH09198.1| aspartate racemase [Bacillus thuringiensis BMB171]
Length = 224
Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQAIPK 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+++L+T AT++ + I I + + + + IK E E
Sbjct: 114 N-VKRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEKA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D +++ACT
Sbjct: 169 RKLWSALVVQLKDEVDTVIIACT 191
>gi|254386116|ref|ZP_05001429.1| aspartate racemase [Streptomyces sp. Mg1]
gi|194344974|gb|EDX25940.1| aspartate racemase [Streptomyces sp. Mg1]
Length = 238
Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 2/123 (1%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L +I NT + D++++ S+ L A A + + +L T T+ + +
Sbjct: 68 DLVLICTNTMHKVA-DQVQAGI-SVPLLHLADATADAVKAAGARRVGLLGTAFTMEQDFY 125
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + + L RV I +E + + + I+L
Sbjct: 126 RGRLAAAGLDVRVPDAAGRALVHRVIYEELCQGIVREESRAAYRHVIGQLVADGAEGIIL 185
Query: 198 ACT 200
CT
Sbjct: 186 GCT 188
>gi|306480112|emb|CBV36344.1| glutamate racemase [Helicobacter pylori]
Length = 93
Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 22/80 (27%), Gaps = 8/80 (10%)
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235
+ +V++L CTH+PLI + + D+I +
Sbjct: 2 RYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMDHFALSTPPLLIHSGDAIVEYLQQ--K 59
Query: 236 RINTHQTRVFDDHALFLSGK 255
F SG
Sbjct: 60 YALKKNACAFPKVEFHASGD 79
>gi|199597926|ref|ZP_03211351.1| Aspartate racemase [Lactobacillus rhamnosus HN001]
gi|258507253|ref|YP_003170004.1| aspartate racemase [Lactobacillus rhamnosus GG]
gi|199591183|gb|EDY99264.1| Aspartate racemase [Lactobacillus rhamnosus HN001]
gi|257147180|emb|CAR86153.1| Aspartate racemase [Lactobacillus rhamnosus GG]
gi|259648619|dbj|BAI40781.1| aspartate racemase [Lactobacillus rhamnosus GG]
Length = 250
Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPATLRR 134
QP VI CNTA D+L + AI+ + I +++T T++
Sbjct: 76 QPEFIVIVCNTA-HYFYDQLAAASSVPLLHMPRLAIRDMCERFPNEERIGLIATQGTIKD 134
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EGKRT 192
S+ I + + + L V E ++ E+ E+ +++ + +
Sbjct: 135 GIYSHEIE--NTGRKVI-LGDQALQDMVTELIYKYVKEKGEVNAELYHRILKRMHDDFQV 191
Query: 193 DVIVLACT 200
+VIVL CT
Sbjct: 192 NVIVLGCT 199
>gi|229550848|ref|ZP_04439573.1| aspartate racemase [Lactobacillus rhamnosus LMS2-1]
gi|258538440|ref|YP_003172939.1| aspartate racemase [Lactobacillus rhamnosus Lc 705]
gi|229315798|gb|EEN81771.1| aspartate racemase [Lactobacillus rhamnosus LMS2-1]
gi|257150116|emb|CAR89088.1| Aspartate racemase [Lactobacillus rhamnosus Lc 705]
Length = 250
Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPATLRR 134
QP VI CNTA D+L + AI+ + I +++T T++
Sbjct: 76 QPEFIVIVCNTA-HYFYDQLAAASSVPLLHMPRLAIRDMCERFPNEERIGLIATQGTIKD 134
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EGKRT 192
S+ I + + + L V E ++ E+ E+ +++ + +
Sbjct: 135 GIYSHEIE--NTGRKVI-LGDQALQDMVTELIYKYVKEKGEVNAELYHRILKRMHDDFQV 191
Query: 193 DVIVLACT 200
+VIVL CT
Sbjct: 192 NVIVLGCT 199
>gi|162404920|gb|ABX88891.1| glutamate racemase [Edwardsiella ictaluri 93-146]
Length = 74
Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL-SGKPDIAMRRL 263
+ Q+ P +D+ +IARR L+ T + + A A+ +
Sbjct: 1 LRDELAQVLPAGTRLVDSGAAIARRVAWLIANQATLPGKDMRNVAYATQCDAQTAALLPV 60
Query: 264 MQGFGLKS 271
++ G ++
Sbjct: 61 LRQLGFET 68
>gi|306480080|emb|CBV36313.1| glutamate racemase [Helicobacter pylori]
Length = 82
Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 8/82 (9%)
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI + + D+I + F
Sbjct: 1 IEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 58
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 PKVEFHASGDVVWLEKQAKEWL 80
>gi|301056262|ref|YP_003794473.1| aspartate racemase [Bacillus anthracis CI]
gi|300378431|gb|ADK07335.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
Length = 224
Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK E E
Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+E+ + + D ++ACT
Sbjct: 169 RELWSALVLQLKDEVDTAIIACT 191
>gi|297585520|ref|YP_003701300.1| aspartate racemase [Bacillus selenitireducens MLS10]
gi|297143977|gb|ADI00735.1| aspartate racemase [Bacillus selenitireducens MLS10]
Length = 232
Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 2/137 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K V+A NT + D++ S S+ FL + + + +L T T
Sbjct: 71 LEKAGAEAIVLATNTMHAVA-DDIASGL-SIPFLHIGDVAAKKISSQGLKTVGLLGTSFT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + +++ Q I I + + + E K
Sbjct: 129 MEQPFYHERLNANGIQTLIPSEEDRIFIHDAIFTELCMGVFKHETKARFLAIMDRLRQDG 188
Query: 192 TDVIVLACTHYPLIVHV 208
+ IVL CT PL++
Sbjct: 189 AEGIVLGCTEIPLLIKE 205
>gi|88802581|ref|ZP_01118108.1| aspartate racemase [Polaribacter irgensii 23-P]
gi|88781439|gb|EAR12617.1| aspartate racemase [Polaribacter irgensii 23-P]
Length = 243
Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 7/148 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + IL+K V+A NT L+ D+L + K A + + +
Sbjct: 75 FLKIKIQILEKSNVDYVVLASNTP-HLVFDKLAESVNVKMISIVEETCK-AISKSGIKKV 132
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE--DEIKKEIE 181
+L T +T+ + + + + I + + E+Y + E E KKE+
Sbjct: 133 GLLGTKSTMSKGFYQKV--GENNGIKIVIPNDENQNYIHEKYMDELVFNEIIPETKKELI 190
Query: 182 GCFIEKE-GKRTDVIVLACTHYPLIVHV 208
E E + + IVL T PLI+
Sbjct: 191 RIINELEVNENIEGIVLGGTELPLILKQ 218
>gi|212223950|ref|YP_002307186.1| hypothetical aspartate racemase [Thermococcus onnurineus NA1]
gi|212008907|gb|ACJ16289.1| hypothetical aspartate racemase [Thermococcus onnurineus NA1]
Length = 226
Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 63/171 (36%), Gaps = 21/171 (12%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K+++ + L + + ++ NT + +++ ++ + + A+ +
Sbjct: 58 RKKILINAAKALKRAGAEIIAMSANTP-HKVFPDVQKEV-NVPMVSIIEAVAEEIKRRGI 115
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKED 174
+ +L T T+ + N + + + ++S+I E
Sbjct: 116 KRVLLLGTKTTMSSDFYVNALREEGFEVVVPSEEEQERLNSIIFNELAFENFRNKAW--- 172
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSD 224
I + IE +++ K ++L CT PL + + ++ D ++
Sbjct: 173 -IVELIERYARKEKVKG---VILGCTELPL---AIK--AGDVSIEVFDTAE 214
>gi|1545809|dbj|BAA12209.1| aspartate racemase [Desulfurococcus sp. SY]
Length = 235
Score = 51.9 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 45/148 (30%), Gaps = 9/148 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G L L+ + ++ CNTA +D + + V
Sbjct: 58 GEDPRPELINSARK-----LESWGADFIIMPCNTAHFFAEDI--QKAIRIPLVSMVEETA 110
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+ + +L+T T++ + + L +E G+K
Sbjct: 111 ERVKEMGLRKVGLLATDGTIKGLVYHRALLKRGIAIVTPDRTGQELV--MEGIYRGVKAG 168
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+E+ +K KR D I+ CT
Sbjct: 169 NVAYGRELLLRVAKKLEKRVDGIIAGCT 196
>gi|242398533|ref|YP_002993957.1| Aspartate racemase [Thermococcus sibiricus MM 739]
gi|242264926|gb|ACS89608.1| Aspartate racemase [Thermococcus sibiricus MM 739]
Length = 231
Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 46/130 (35%), Gaps = 6/130 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K+ ++ CNTA +D ++ + + + +L+T T
Sbjct: 74 LEKWGADFIIMPCNTAHFFAEDI--QKAINIPLINMIEEAAEHIKNLGLKKAGLLATEGT 131
Query: 132 LRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
++ + + + + L + E ++ +K +E +K K
Sbjct: 132 VKGLVYHRALLKRGIEIAVPNEKDQKALMDAIYEGIKAGNLEWGR-QKMLE--VAKKLEK 188
Query: 191 RTDVIVLACT 200
R D ++ CT
Sbjct: 189 RCDGLIAGCT 198
>gi|254456471|ref|ZP_05069900.1| aspartate racemase [Candidatus Pelagibacter sp. HTCC7211]
gi|207083473|gb|EDZ60899.1| aspartate racemase [Candidatus Pelagibacter sp. HTCC7211]
Length = 248
Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 28/176 (15%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-----QSGLI 123
+L+K + VI CNTA D+L+ + + K+ +T ++ I
Sbjct: 81 CKLLEKNKCKFIVIPCNTA-HYWFDDLQKKVN----ISIINMPKEVFKFTKQNCKKNSKI 135
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-----CGIKIKEDEIKK 178
+L+T TL N + S L + A G + K
Sbjct: 136 GLLATEGTLNTGVYHNFFNKNYDLVQ----PSQTLQKKSVNKAIKLVKMGNVKAAAKAIK 191
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD----WLDNSDSIARRA 230
++ + K+ +L CT P+ + F+ V +LD + +A A
Sbjct: 192 PAINSLLKMKCKKI---ILGCTELPIAIFAFKSF--ENVKSSKIFLDPNLILANSA 242
>gi|300741989|ref|ZP_07072010.1| aspartate racemase [Rothia dentocariosa M567]
gi|300381174|gb|EFJ77736.1| aspartate racemase [Rothia dentocariosa M567]
Length = 234
Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ L ++A NT + R+T ++ L V A A + +L T T
Sbjct: 71 LEGAGAQLLLVATNTMHKVAPAIERAT--TVPLLHVVDATATAIQRQGLQRVGLLGTTFT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILAS---RVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + + + A + E C ++ E E + ++ +
Sbjct: 129 MSDGFYTKRMA--AQGIQTIVPTEPEQAETSRIIFEQLCLGRV-EPEAVQYLQQVITGLK 185
Query: 189 GKRTDVIVLACT 200
+ ++L CT
Sbjct: 186 EQGAQGVILGCT 197
>gi|296536291|ref|ZP_06898405.1| aspartate racemase [Roseomonas cervicalis ATCC 49957]
gi|296263380|gb|EFH09891.1| aspartate racemase [Roseomonas cervicalis ATCC 49957]
Length = 235
Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 13/135 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ--AAAYTQSGLISILSTP 129
L+ I CNTA E + L V A + A SG + +L+T
Sbjct: 73 LEAAGCGAIAIPCNTA--HGWYEAMQAATPLPILHIVDAAAEDLARQGVASGRVGLLATA 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--- 186
TL + + + V + A E + GI + + E E
Sbjct: 131 GTLAMRLYQPRLEARG-----YSVITPDEAEMRELVSPGIALVKANRVAEAYAPLAEAAT 185
Query: 187 -KEGKRTDVIVLACT 200
+ + +VL CT
Sbjct: 186 RLKARGAAAVVLGCT 200
>gi|330948253|gb|EGH48513.1| glutamate racemase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 36
Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLM 36
+ IFDSG+GGL VL ++R L+
Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQLL 34
>gi|227875832|ref|ZP_03993958.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35243]
gi|306819113|ref|ZP_07452827.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35239]
gi|227843580|gb|EEJ53763.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35243]
gi|304648089|gb|EFM45400.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35239]
Length = 259
Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 13/135 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-----GLISIL 126
L VI CNTA + L++ ++ + A + ++I+
Sbjct: 93 LQDAGAEFLVIPCNTAT----NFLQAVVEAVDIEVVNIVTETVAEIGRKNAGGIKRVAIM 148
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFI 185
+T T+ + + LV S L + G + +E+ G
Sbjct: 149 ATEGTIASEIYQETLQLAGYEA---LVPSAQLQKEISGIIYGYVKAGQPVSRELFFGIIN 205
Query: 186 EKEGKRTDVIVLACT 200
+ D ++ CT
Sbjct: 206 KLRQNEADAVICGCT 220
>gi|125716925|ref|YP_001034058.1| amino acid recemase [Streptococcus sanguinis SK36]
gi|125496842|gb|ABN43508.1| Amino acid recemase, putative [Streptococcus sanguinis SK36]
Length = 232
Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ + L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQDKI-TIPILHIAQATAQALLTDGIQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + + +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLA 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 180 VIDDLKKAGAEAVILGCT 197
>gi|296273109|ref|YP_003655740.1| aspartate racemase [Arcobacter nitrofigilis DSM 7299]
gi|296097283|gb|ADG93233.1| aspartate racemase [Arcobacter nitrofigilis DSM 7299]
Length = 230
Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 52/140 (37%), Gaps = 3/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + + ++K +I NT + +++ ++ + A +
Sbjct: 61 AEILSVAAQNIEKASADFLLICTNTMHKVA-PQIQKNI-NIPIVHIADATAKVLQKDIIK 118
Query: 122 LISILSTPATLRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L T T+R + N I ++ + + + + ++ + I +E KKE
Sbjct: 119 KVGLLGTAFTMREDFYKNKISENFGIEVLVPNEEDIKIVHKIIYEELCLGIVREESKKEY 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 179 LKIIDKLVSNGAEGIILGCT 198
>gi|228948505|ref|ZP_04110786.1| amino-acid racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228811185|gb|EEM57525.1| amino-acid racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 224
Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + S+ L V +A T +++L+T AT
Sbjct: 70 LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPETA-KRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I I + + + IK E E +E+ + +
Sbjct: 127 VQAGIYQDGIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEARELWSALVLQLKDE 182
Query: 192 TDVIVLACT 200
D ++ACT
Sbjct: 183 VDTAIIACT 191
>gi|227529463|ref|ZP_03959512.1| aspartate racemase [Lactobacillus vaginalis ATCC 49540]
gi|227350548|gb|EEJ40839.1| aspartate racemase [Lactobacillus vaginalis ATCC 49540]
Length = 237
Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 23/131 (17%)
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS-GLISILSTPATLRRTYTS 138
V+ CNTA DEL++ + L + + + + +L T T+
Sbjct: 81 VLICNTA-HYSFDELQAA-TDVPILNMLQETVNEIKRLKPDAKRVGLLGTDGTMVSGIYD 138
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEE---------YACGIKIKEDEIKKEIEGCFIEKEG 189
+ I + + + ++ + E+ K + ++K IE
Sbjct: 139 SYIQNAGYE---EVKATPEIQEMTEDLIYHDIKESGHSDGKKYHELVRKMIEE------- 188
Query: 190 KRTDVIVLACT 200
+ D+++L CT
Sbjct: 189 EHCDIVILGCT 199
>gi|116493795|ref|YP_805529.1| aspartate racemase [Lactobacillus casei ATCC 334]
gi|191637037|ref|YP_001986203.1| Aspartate racemase [Lactobacillus casei BL23]
gi|239631050|ref|ZP_04674081.1| aspartate racemase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301065371|ref|YP_003787394.1| aspartate racemase [Lactobacillus casei str. Zhang]
gi|116103945|gb|ABJ69087.1| Aspartate racemase [Lactobacillus casei ATCC 334]
gi|190711339|emb|CAQ65345.1| Aspartate racemase [Lactobacillus casei BL23]
gi|239527333|gb|EEQ66334.1| aspartate racemase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300437778|gb|ADK17544.1| Aspartate racemase [Lactobacillus casei str. Zhang]
gi|327381064|gb|AEA52540.1| Aspartate racemase [Lactobacillus casei LC2W]
gi|327384239|gb|AEA55713.1| Aspartate racemase [Lactobacillus casei BD-II]
Length = 250
Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134
P VI CNTA D+L + P AI + + +++T T++
Sbjct: 76 NPEFMVIVCNTA-HYFYDQLAAATPIPLLHMPHLAISDMCERFPDEKRVGLIATQGTIQD 134
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EGKRT 192
S+ I + + ++ L V E ++ E+ + +++ +
Sbjct: 135 GIYSHEIETSGREV---VLGDQALQDMVTELIYKYVKEKGEVNAALYHRILQRMHDDFNV 191
Query: 193 DVIVLACT 200
+VIVL CT
Sbjct: 192 NVIVLGCT 199
>gi|257878492|ref|ZP_05658145.1| aspartate racemase [Enterococcus faecium 1,230,933]
gi|257882913|ref|ZP_05662566.1| aspartate racemase [Enterococcus faecium 1,231,502]
gi|257884377|ref|ZP_05664030.1| aspartate racemase [Enterococcus faecium 1,231,501]
gi|257889308|ref|ZP_05668961.1| aspartate racemase [Enterococcus faecium 1,231,410]
gi|257894321|ref|ZP_05673974.1| aspartate racemase [Enterococcus faecium 1,231,408]
gi|258615982|ref|ZP_05713752.1| aspartate racemase [Enterococcus faecium DO]
gi|260560081|ref|ZP_05832259.1| aspartate racemase [Enterococcus faecium C68]
gi|261207431|ref|ZP_05922117.1| aspartate racemase [Enterococcus faecium TC 6]
gi|289566469|ref|ZP_06446894.1| aspartate racemase [Enterococcus faecium D344SRF]
gi|293560166|ref|ZP_06676668.1| aspartate racemase [Enterococcus faecium E1162]
gi|294621572|ref|ZP_06700738.1| aspartate racemase [Enterococcus faecium U0317]
gi|314939955|ref|ZP_07847155.1| aspartate racemase [Enterococcus faecium TX0133a04]
gi|314942564|ref|ZP_07849398.1| aspartate racemase [Enterococcus faecium TX0133C]
gi|314947462|ref|ZP_07850877.1| aspartate racemase [Enterococcus faecium TX0082]
gi|314952486|ref|ZP_07855487.1| aspartate racemase [Enterococcus faecium TX0133A]
gi|314992417|ref|ZP_07857843.1| aspartate racemase [Enterococcus faecium TX0133B]
gi|314996257|ref|ZP_07861316.1| aspartate racemase [Enterococcus faecium TX0133a01]
gi|257812720|gb|EEV41478.1| aspartate racemase [Enterococcus faecium 1,230,933]
gi|257818571|gb|EEV45899.1| aspartate racemase [Enterococcus faecium 1,231,502]
gi|257820215|gb|EEV47363.1| aspartate racemase [Enterococcus faecium 1,231,501]
gi|257825668|gb|EEV52294.1| aspartate racemase [Enterococcus faecium 1,231,410]
gi|257830700|gb|EEV57307.1| aspartate racemase [Enterococcus faecium 1,231,408]
gi|260073916|gb|EEW62240.1| aspartate racemase [Enterococcus faecium C68]
gi|260078322|gb|EEW66027.1| aspartate racemase [Enterococcus faecium TC 6]
gi|289161734|gb|EFD09609.1| aspartate racemase [Enterococcus faecium D344SRF]
gi|291598877|gb|EFF29928.1| aspartate racemase [Enterococcus faecium U0317]
gi|291605838|gb|EFF35270.1| aspartate racemase [Enterococcus faecium E1162]
gi|313589579|gb|EFR68424.1| aspartate racemase [Enterococcus faecium TX0133a01]
gi|313593052|gb|EFR71897.1| aspartate racemase [Enterococcus faecium TX0133B]
gi|313595392|gb|EFR74237.1| aspartate racemase [Enterococcus faecium TX0133A]
gi|313598668|gb|EFR77513.1| aspartate racemase [Enterococcus faecium TX0133C]
gi|313640789|gb|EFS05369.1| aspartate racemase [Enterococcus faecium TX0133a04]
gi|313646012|gb|EFS10592.1| aspartate racemase [Enterococcus faecium TX0082]
Length = 243
Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 66/184 (35%), Gaps = 29/184 (15%)
Query: 66 FLFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122
FL DI + +P V+ CNTA +EL++ + L A + +G
Sbjct: 64 FLLDDIEKQNLLRPNFIVLTCNTA-HYFFEELQAA-TDIPILHMPREAANELVRQHTTGR 121
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++IL T +++ + + + ++ L ++ + D + +E+
Sbjct: 122 VAILGTEGSMKAGIYEREVKNLGFE---TVIPDTALQEKINYLIYHEIKESDYLNQELYY 178
Query: 183 CFIEK--EGKRTDVIVLACT------------HYP------LIVH-VFRQLSPWPVDWLD 221
+E+ E + ++L CT HYP ++ + + LD
Sbjct: 179 EILEEAVERLNCEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAERSEALD 238
Query: 222 NSDS 225
+
Sbjct: 239 TASE 242
>gi|228917407|ref|ZP_04080958.1| amino-acid racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228842249|gb|EEM87346.1| amino-acid racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 230
Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 67/176 (38%), Gaps = 17/176 (9%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 63 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 119
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + IK E E
Sbjct: 120 TA-KRVALLATEATVQSGIYQDGIAKRN----IEYIHYEQWQESINKIITYIKSGEVEEA 174
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + + D ++ACT ++ D++D++ +A+ +
Sbjct: 175 HRLWEALVLQLKDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVRM 221
>gi|229019989|ref|ZP_04176779.1| amino-acid racemase [Bacillus cereus AH1273]
gi|229026224|ref|ZP_04182584.1| amino-acid racemase [Bacillus cereus AH1272]
gi|228735070|gb|EEL85705.1| amino-acid racemase [Bacillus cereus AH1272]
gi|228741310|gb|EEL91520.1| amino-acid racemase [Bacillus cereus AH1273]
Length = 224
Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 53/130 (40%), Gaps = 9/130 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+ + CNTA L +EL+ + ++ L V +K T+ +++L+T A
Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQRSI-TIPILNIVDETLKAIPENTK--KVALLATEA 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + I I + + + + IK E E +++ + +
Sbjct: 126 TVQAGIYQDGITKRN----IEYIHNEQWQEMINQIITCIKGGEIEKARKLWSVLVLQLKD 181
Query: 191 RTDVIVLACT 200
D ++ACT
Sbjct: 182 EVDTAIIACT 191
>gi|228955032|ref|ZP_04117048.1| amino-acid racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228804658|gb|EEM51261.1| amino-acid racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 235
Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 68 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPE 124
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + + IK E E
Sbjct: 125 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIIMYIKSGEVEEA 179
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ I + D ++ACT
Sbjct: 180 RKLWSALIVQLKDEVDTAIIACT 202
>gi|306479849|emb|CBV36091.1| glutamate racemase [Helicobacter pylori]
Length = 93
Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 8/92 (8%)
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235
+ +VI+L CTH+PLI + + D+I +
Sbjct: 2 RYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQ--K 59
Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 60 YALKKNACTFPKVEFHASGDVIWLEKQAKEWL 91
>gi|306480232|emb|CBV36460.1| glutamate racemase [Helicobacter pylori]
Length = 93
Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 8/92 (8%)
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLP 235
+ VI+L CTH+PLI P P + + D+I +
Sbjct: 2 RYYFTPLKILPKVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--K 59
Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ F SG ++ +
Sbjct: 60 YALKNNACAFPKVEFHASGDVIWLEKQAKEWL 91
>gi|222086352|ref|YP_002544886.1| aspartate racemase protein [Agrobacterium radiobacter K84]
gi|221723800|gb|ACM26956.1| aspartate racemase protein [Agrobacterium radiobacter K84]
Length = 239
Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 2/133 (1%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L +I NT LI E+ + S+ + + A +L+
Sbjct: 67 VAHRLQAAGAECVLICTNTM-HLIAPEVAARI-SVPLINIIDETAAALKAAGRVKPLLLA 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + ++ + + L + I +DE + +
Sbjct: 125 TRYTMEHGFYADRMARNGVSIMVPGADDRTLVHDIIFNELCAGIVKDESRNTLVEIIDRA 184
Query: 188 EGKRTDVIVLACT 200
+ D ++L CT
Sbjct: 185 KAAGADSVILGCT 197
>gi|218782587|ref|YP_002433905.1| aspartate racemase [Desulfatibacillum alkenivorans AK-01]
gi|218763971|gb|ACL06437.1| aspartate racemase [Desulfatibacillum alkenivorans AK-01]
Length = 231
Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 44/143 (30%), Gaps = 6/143 (4%)
Query: 60 LKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ L +I + + C NT + D + L A QA
Sbjct: 60 ISAELCGAAKNIQAAGADFMLI--CTNTMHKVAPDI--EAAVDIPLLHIADAAAQALVKD 115
Query: 119 QSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ + +L T T+ + + L + + I L + V + + +
Sbjct: 116 EYSKVGLLGTAFTMEQDFYRGRLSRDFGLEVVIPNKEDRELVNDVIFQELCLGQVLSQSR 175
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+E + + I+L CT
Sbjct: 176 EEYARIAADLAAQGAQAIILGCT 198
>gi|153835552|ref|ZP_01988219.1| aspartate racemase [Vibrio harveyi HY01]
gi|148867877|gb|EDL67100.1| aspartate racemase [Vibrio harveyi HY01]
Length = 232
Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/173 (11%), Positives = 53/173 (30%), Gaps = 13/173 (7%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + ++ +I NT + D+++ ++ + A +
Sbjct: 61 AIILAQAAKSVEAGGADFILICTNTMHKVA-DQIQQAV-NVPLVHIADATAEKLVADGIK 118
Query: 122 LISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L T T+ + + LI + + + V D+ ++
Sbjct: 119 KVGLLGTRFTMEQDFYKQRLIDKFGVDVVVPRSDDQTIIHNVIYNELCKGEVRDDSRQHY 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRA 230
+ + + ++L CT L V D ++ A+ A
Sbjct: 179 LAIIEKLVEQGAEAVILGCT-------EIAMLVEPHHTDVKLYDTTEIHAKAA 224
>gi|269977467|ref|ZP_06184439.1| aspartate racemase [Mobiluncus mulieris 28-1]
gi|269934383|gb|EEZ90945.1| aspartate racemase [Mobiluncus mulieris 28-1]
Length = 237
Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 13/135 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-----GLISIL 126
L VI CNTA + L++ ++ + A + ++I+
Sbjct: 71 LQDAGAEFLVIPCNTAT----NFLQAVVEAVDIEVVNIVTETVAEIGRKNAGGIKRVAIM 126
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFI 185
+T T+ + + LV S L + G + +E+ G
Sbjct: 127 ATEGTIASEIYQETLQLAGYEA---LVPSAQLQKEISGIIYGYVKAGQPVSRELFFGIIN 183
Query: 186 EKEGKRTDVIVLACT 200
+ D ++ CT
Sbjct: 184 KLRQNEADAVICGCT 198
>gi|89092907|ref|ZP_01165859.1| hypothetical protein MED92_10614 [Oceanospirillum sp. MED92]
gi|89082932|gb|EAR62152.1| hypothetical protein MED92_10614 [Oceanospirillum sp. MED92]
Length = 233
Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 3/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + +++ +I NT + D ++ S+ L A + +
Sbjct: 63 ILIEAAKGVERAGADFVLICTNTMHKVA-DAIQENI-SIPILHIADATAEKLKADGVSKV 120
Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T+ + + L + + + + V + ED +
Sbjct: 121 GLLGTRFTMEQDFYKQRLTDKHGIEVVVPEAEEREVVHSVIYNELCKGLIEDPSRDRYLK 180
Query: 183 CFIEKEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 181 IINDLYKSGAQAVILGCT 198
>gi|229163751|ref|ZP_04291696.1| amino-acid racemase [Bacillus cereus R309803]
gi|228619718|gb|EEK76599.1| amino-acid racemase [Bacillus cereus R309803]
Length = 224
Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 57 EAMKKAIIEGAQK-LESTGVEFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +++L+T AT++ + I I + + + + IK E E
Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQTMINQIIIYIKSGEVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D ++ACT
Sbjct: 169 RKLWSTLVLQLKDEVDTAIIACT 191
>gi|115358254|ref|YP_775392.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115283542|gb|ABI89058.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 233
Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 8/168 (4%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L++ + I CN+A LR + L V A A +++L+T
Sbjct: 69 LLNRCGVDVIAIPCNSA-HHWYAPLRER-SAAPVLHIVDASVAAVPA-GVRRVAVLATGG 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL + + + + + V++ + KI + + +
Sbjct: 126 TLVSGFYQAALRARGFEPVMPAVAAQRDIAACIAAVKAGKIDASV--RRLSRALATLARR 183
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
V V+ CT P+ R P +D++ +AR
Sbjct: 184 DVGVAVMGCTEIPIAARALRDA---PFALIDSTQELARATVAYAAERG 228
>gi|227534586|ref|ZP_03964635.1| aspartate racemase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227187835|gb|EEI67902.1| aspartate racemase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 250
Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134
P VI CNTA D+L + P AI + + +++T T++
Sbjct: 76 NPEFMVIVCNTA-HYFYDQLAAVTPIPLLHMPHLAISDMCERFPDEKRVGLIATQGTIQD 134
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--EGKRT 192
S+ I + + ++ L V E ++ E+ + +++ +
Sbjct: 135 GIYSHEIETSGREV---VLGDQALQDMVTELIYKYVKEKGEVNAALYHRILQRMHDDFNV 191
Query: 193 DVIVLACT 200
+VIVL CT
Sbjct: 192 NVIVLGCT 199
>gi|228936066|ref|ZP_04098875.1| amino-acid racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228823613|gb|EEM69436.1| amino-acid racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 224
Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T T++ I I + + + IK E E
Sbjct: 114 TA-KRVALLATETTVQAGIYQEGIIKRN----IEYIHHEKWQDMINQIITCIKSGEIEKA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
E+ + + D ++ACT
Sbjct: 169 HELWNTLVLQLRDEVDTAIIACT 191
>gi|308172351|ref|YP_003919056.1| amino acid racemase [Bacillus amyloliquefaciens DSM 7]
gi|307605215|emb|CBI41586.1| amino acid racemase [Bacillus amyloliquefaciens DSM 7]
gi|328910442|gb|AEB62038.1| amino acid racemase [Bacillus amyloliquefaciens LL3]
Length = 226
Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 11/131 (8%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K I CNTA + ++L+ + IK+ ++ I++L+T T
Sbjct: 70 LEKTGVDFIAIPCNTA-HIYFNQLKKSISVPLLNMVDETIKKIPKDSK--KIALLATSPT 126
Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
++ + + + +E+ G + + E+ EK
Sbjct: 127 VQSGIFQEALIRENYDFLHQDSWQTCVD--QIIEKIKQGQINESITLFDELHRELAEK-- 182
Query: 190 KRTDVIVLACT 200
D ++ACT
Sbjct: 183 --VDTAIIACT 191
>gi|304394921|ref|ZP_07376805.1| aspartate racemase [Pantoea sp. aB]
gi|304357174|gb|EFM21537.1| aspartate racemase [Pantoea sp. aB]
Length = 230
Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 41/138 (29%), Gaps = 3/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L++ V+ NT + S + L A + +
Sbjct: 63 ILADAARNLERAGAQFIVLCTNTMHKVAAQI--SAATDIPLLHIADATGRRIQQAGVHKV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+T T+ + + L + + + + V + ++
Sbjct: 121 GLLATRFTMEQDFYRGRLHEQFGLEVITPDEADRLFVHEVIYQELCLGEINPASRRRYRE 180
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 181 IMQRLVAQGAEAIILGCT 198
>gi|307244154|ref|ZP_07526272.1| aspartate racemase [Peptostreptococcus stomatis DSM 17678]
gi|306492525|gb|EFM64560.1| aspartate racemase [Peptostreptococcus stomatis DSM 17678]
Length = 239
Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 11/158 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ V+ CNTA ++ + + + A I IL+T
Sbjct: 74 LEAAGADFLVLTCNTA-HYFYKDIVEGL-GVPLINMIEETVVHAKKQGHRKIGILATTGN 131
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+R ++ + ++ + + + G K D+ K IE +
Sbjct: 132 IRTGLYQDMCVAQSMDYYVPTQQVQDMVMDIIYNQVKAGKKADMDQFNKIIE----VLKA 187
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ D +L CT +I + P ++D+S+ +A
Sbjct: 188 EGCDCAILGCTELSIIKKD--EKLPND-FFVDSSEVLA 222
>gi|229112217|ref|ZP_04241757.1| amino-acid racemase [Bacillus cereus Rock1-15]
gi|228671201|gb|EEL26505.1| amino-acid racemase [Bacillus cereus Rock1-15]
Length = 224
Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQAIPK 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+++L+T AT++ + I I + + + + IK E E
Sbjct: 114 NI-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEKA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D +++ACT
Sbjct: 169 RKLWSALVVQLKDEVDTVIIACT 191
>gi|222098225|ref|YP_002532282.1| aspartate racemase family protein [Bacillus cereus Q1]
gi|221242283|gb|ACM14993.1| aspartate racemase family protein [Bacillus cereus Q1]
Length = 224
Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + S+ L V Q +++L+T AT
Sbjct: 70 LESTGVDFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLQTIPKN-VKRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I I + + + IK E E E+ + +
Sbjct: 127 VQAGIYQDGITKRD----IQYIHHEKWQEMINQIITWIKSGELEEAHELWNALVLQLRDE 182
Query: 192 TDVIVLACT 200
D ++ACT
Sbjct: 183 VDTAIIACT 191
>gi|197106374|ref|YP_002131751.1| aspartate racemase [Phenylobacterium zucineum HLK1]
gi|196479794|gb|ACG79322.1| aspartate racemase [Phenylobacterium zucineum HLK1]
Length = 237
Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 62/167 (37%), Gaps = 11/167 (6%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + + CNTA +L + + + +AAA + +
Sbjct: 65 VLAEMAGALRGAGADVLAMPCNTA--HAHSDLIQRASGLPLIDMIDLAAEAAAESGAVRA 122
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE-YACGIKIKEDEIKKEIEG 182
+L T L+ + + + + +E Y E+ ++++
Sbjct: 123 GVLGTKGALK--LYREYLA--ARGLGMVSLPPERQEAFMETLYRIKGGDLSPEVSRQMKA 178
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
E +V+V CT PL++ + + V+ +D +D +ARR
Sbjct: 179 FADELVKGGAEVLVAGCTELPLVLDP-QDV---KVELVDPADLLARR 221
>gi|261822403|ref|YP_003260509.1| aspartate racemase [Pectobacterium wasabiae WPP163]
gi|261606416|gb|ACX88902.1| aspartate racemase [Pectobacterium wasabiae WPP163]
Length = 236
Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 9/159 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VI NT + D R++ + L A + + +L T T
Sbjct: 73 LRQAGADAIVICTNTMHKVADDVERAS--QLPLLHIADATGASLKQHGLKKVGLLGTRYT 130
Query: 132 LRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + I + + + +R+ + D + G + E +
Sbjct: 131 MEQDFYRQRIQERFGVDVIVPDQAGKEAVNRIIYDELCLGNINDTSRLVYRGIIQQLEQQ 190
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD--SIA 227
+ I+L CT PL++ + V D S +IA
Sbjct: 191 GAEGIILGCTEIPLLISA-QDA---KVPLFDTSKLHAIA 225
>gi|119776018|ref|YP_928758.1| hypothetical protein Sama_2886 [Shewanella amazonensis SB2B]
gi|119768518|gb|ABM01089.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 225
Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 40/139 (28%), Gaps = 16/139 (11%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159
+ L A + + +L T T+ + + LI Y + + + L
Sbjct: 93 GIPILHIADATAERLKSDGIDRVGLLGTRFTMEQDFYKSRLIERYGIEVLVPNAAERELV 152
Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---P 216
V + + + ++ + I+L CT L
Sbjct: 153 HDVIYNELCLGKIKPKSREVYLAIIDSLANAGAEAIILGCT-------EIALLVEQNHTH 205
Query: 217 VDWLDN----SD-SIARRA 230
+ D ++ ++A+
Sbjct: 206 IKLYDTTQIHAEQAVAKAL 224
>gi|94312931|ref|YP_586140.1| putative aspartate racemase [Cupriavidus metallidurans CH34]
gi|93356783|gb|ABF10871.1| putative aspartate racemase [Cupriavidus metallidurans CH34]
Length = 242
Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 37/137 (27%), Gaps = 3/137 (2%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
M + ++ V+ NT + FL V A +
Sbjct: 64 MQQAARQVEAGGADFVVLCTNTM--HKLAPAIEAVLDVPFLHIVDPTADALRRAGIERVG 121
Query: 125 ILSTPATLRRTYTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + + Q I L V + E + +
Sbjct: 122 LLGTRFTMEQDFYRARMEQRHGIQVVIPDQDDRTLVHDVIYDELCHGVVRSESRAVYQRI 181
Query: 184 FIEKEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 182 IESLKAGGAQGVILGCT 198
>gi|212637275|ref|YP_002313800.1| aspartate racemase [Shewanella piezotolerans WP3]
gi|212558759|gb|ACJ31213.1| Aspartate racemase [Shewanella piezotolerans WP3]
Length = 197
Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++K +I NT + E+ + ++ L A ++ + +L T T
Sbjct: 32 VEKAGADFILICTNTMHKVA-PEIEANI-TIPILHIADATAESLLDHGIKKVGLLGTRFT 89
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + L Y + + S I + + D+ + E +
Sbjct: 90 MEQDFYKGRLTEKYNIEVIVPEQSDRIEIHEIIYKELCRGVIRDDSRDRYIQIIDELRAQ 149
Query: 191 RTDVIVLACT 200
+ ++L CT
Sbjct: 150 GVEAVILGCT 159
>gi|209695461|ref|YP_002263390.1| aspartate racemase [Aliivibrio salmonicida LFI1238]
gi|208009413|emb|CAQ79689.1| aspartate racemase [Aliivibrio salmonicida LFI1238]
Length = 237
Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 35/167 (20%)
Query: 56 EDHALKKRLMFLFS-------------DILDKYQPVLSVIACNTA-------FTLIKDEL 95
+ R F+ D L++ VI CNTA
Sbjct: 42 SVPQIPDRTAFIMGHGTDPYPELKHSFDQLEQSGAECIVIPCNTAHYWYPQLSATS---- 97
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC--HIHLV 153
+ + + ++ Q + ++ +L+T AT++ ++ Y L
Sbjct: 98 -----HVHTISIIDSVVQETQLRKHKIVGLLATTATMKTKMYQQKLNQYNIDVIETDDLQ 152
Query: 154 SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
++A E A ++ K + F + + + ++ CT
Sbjct: 153 QQAVMAGIYEVKAGNVEKG----KAMMLPVFEDMLAQGAEAVIFGCT 195
>gi|315230092|ref|YP_004070528.1| aspartate racemase [Thermococcus barophilus MP]
gi|315183120|gb|ADT83305.1| aspartate racemase [Thermococcus barophilus MP]
Length = 230
Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 12/164 (7%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + ++ CNTA DE++ ++ + + + + +L+T T
Sbjct: 73 LESWGADFIIMPCNTA-HFFADEIQRAI-NIPLINMIEETAEYVKQLGIKRVGLLATTGT 130
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + + + GIK + E +E+ +K K
Sbjct: 131 VVSGIYQRALEK--KGIKVIIPNKEEQENVMRGIYEGIKANKFEFGRELLLEIAKKLEKE 188
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIARRARCL 233
++ I+ CT V L P V +D D IA +A L
Sbjct: 189 SEGIIAGCT------EVSVALKPEDLEVPLIDPMDVIAEKAVKL 226
>gi|114284|sp|P29079|RACD_ENTFC RecName: Full=Aspartate racemase
gi|47644|emb|CAA43598.1| aspartate racemase [Streptococcus thermophilus]
Length = 243
Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 30/159 (18%)
Query: 66 FLFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122
FL DI + +P V+ CNTA +EL++ + L A + +G
Sbjct: 64 FLLDDIEKQNLLRPNFIVLTCNTA-HYFFEELQAA-TDIPILHMPREAANELVRQHTTGR 121
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKEDEI 176
++IL T +++ + + + I ++ +I E ++ + +
Sbjct: 122 VAILGTEGSMKAGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEIL 181
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT------------HYP 203
++ +E EK ++L CT HYP
Sbjct: 182 EEAVERLNCEK-------VILGCTELSLMNEFAEDNHYP 213
>gi|306480416|emb|CBV36636.1| glutamate racemase [Helicobacter pylori]
Length = 81
Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 58
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 KVEFHASGDVVWLEKQAKEWL 79
>gi|240103398|ref|YP_002959707.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3]
gi|239910952|gb|ACS33843.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3]
Length = 234
Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 63/195 (32%), Gaps = 23/195 (11%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVP 109
G L L+ + ++ CNTA I+ +R + + +
Sbjct: 57 GPDPRPELIDSAKK-----LESWGADFIIMPCNTAHFFADTIQRAIR-----IPLVSMIE 106
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
+ +L+T T++ + + L + GI
Sbjct: 107 ETAERVKGMGLRKAGLLATDGTIKGLIYHRALLKRGVSIAVPGKKDQRLVMKA--IYEGI 164
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIA 227
K E+ +E+ K +R+DVI+ CT V L P V +D D IA
Sbjct: 165 KAGNLELGRELLLKVAGKLQRRSDVIIAGCT------EVSVALKPEDLSVPLIDPLDVIA 218
Query: 228 RRARCLLPRINTHQT 242
+A L + +T
Sbjct: 219 EKAVKLALGLEELRT 233
>gi|306480172|emb|CBV36402.1| glutamate racemase [Helicobacter pylori]
Length = 78
Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 8/78 (10%)
Query: 196 VLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+L CTH+PLI P P + + D+I + + F
Sbjct: 1 ILGCTHFPLIARQIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYTLKNNAHAFPKVE 58
Query: 250 LFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 FHASGDVIWLEKQAKEWL 76
>gi|257898273|ref|ZP_05677926.1| aspartate racemase [Enterococcus faecium Com15]
gi|257836185|gb|EEV61259.1| aspartate racemase [Enterococcus faecium Com15]
Length = 243
Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 30/159 (18%)
Query: 66 FLFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122
FL DI + +P V+ CNTA +EL++ + L A + +G
Sbjct: 64 FLLDDIEKQNLLRPNFIVLTCNTA-HYFFEELQAA-TDIPILHMPREAANELVRQHTTGR 121
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKEDEI 176
++IL T +++ + + + I ++ +I E ++ + +
Sbjct: 122 VAILGTEGSMKAGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEIL 181
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT------------HYP 203
++ +E EK ++L CT HYP
Sbjct: 182 EEAVERLNCEK-------VILGCTELSLMHEFAEDNHYP 213
>gi|154151570|ref|YP_001405188.1| aspartate racemase [Candidatus Methanoregula boonei 6A8]
gi|154000122|gb|ABS56545.1| aspartate racemase [Methanoregula boonei 6A8]
Length = 240
Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 18/146 (12%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIA NT + +L + L A + +++L T T
Sbjct: 74 LKRGGADFIVIASNTLNSRA--DLIEQSTGLPVLRIYDVTGAAVNKSGLKKVALLGTKYT 131
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC----FIEK 187
+ + + + + + ++ E+ I + ++ +I +I
Sbjct: 132 MEAPFYRDTLKNKYGIDVVVPNAT-------EQDYINNVIFDQLVRNDIRNDSREGYIRI 184
Query: 188 EGKRTDV-----IVLACTHYPLIVHV 208
+ D ++L CT PL+++
Sbjct: 185 INRLVDEEGAQGVILGCTEIPLLINQ 210
>gi|325168427|ref|YP_004280217.1| aspartate racemase [Agrobacterium sp. H13-3]
gi|325064150|gb|ADY67839.1| Aspartate racemase [Agrobacterium sp. H13-3]
Length = 235
Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 4/139 (2%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R++ + L + L ++A NT + D++ S+ F+ A A
Sbjct: 68 RILNEHAIALQRGGADLLILATNTMHKVA-DKIVGRV-SIPFVHIADATATAILDRGFRR 125
Query: 123 ISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++T T+ +T YT LI +S + E C ++E+ + E
Sbjct: 126 PGLMATAFTMEQTFYTDRLIAQGLSPTIPEADDRTETHRIIYEELCRDIVREES-RLTYE 184
Query: 182 GCFIEKEGKRTDVIVLACT 200
K D ++L CT
Sbjct: 185 RIAQRLVDKGCDCLILGCT 203
>gi|313680995|ref|YP_004058734.1| aspartate racemase [Oceanithermus profundus DSM 14977]
gi|313153710|gb|ADR37561.1| aspartate racemase [Oceanithermus profundus DSM 14977]
Length = 230
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 62/216 (28%), Gaps = 29/216 (13%)
Query: 31 KMRFLMPEYH---FIYVADDVGFPYGNW-----EDHALKKRLMFLFSDILDKYQPVLSVI 82
R L P+ +Y D + AL + L+ ++ VI
Sbjct: 26 AARRLGPDRSAEILLYSLDWARI---ERLQHAGDWDALAEELITGARRLVL-GGAGFLVI 81
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
A NT + E + L A +A +L T T+ + + +
Sbjct: 82 ATNTMHKVA--EAVGAVSGLEVLHIADATARALQAAGVRRAGLLGTRFTMEEPFLRDKLA 139
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ + + + R+ +E ++ + + IVL CT
Sbjct: 140 GWGLEVLVPGPADREAVHRIIYDELVQGEIREESRRVYRRVMARLAERGAEGIVLGCT-- 197
Query: 203 PLIVHVFRQLSPW---PVDWLDN----SD-SIARRA 230
L PV D ++ ++AR
Sbjct: 198 -----EIGLLVGPEDAPVPVFDTTRIHAEAAVARAL 228
>gi|227551698|ref|ZP_03981747.1| aspartate racemase [Enterococcus faecium TX1330]
gi|257887166|ref|ZP_05666819.1| aspartate racemase [Enterococcus faecium 1,141,733]
gi|257895703|ref|ZP_05675356.1| aspartate racemase [Enterococcus faecium Com12]
gi|293377687|ref|ZP_06623876.1| aspartate racemase [Enterococcus faecium PC4.1]
gi|293571882|ref|ZP_06682898.1| aspartate racemase [Enterococcus faecium E980]
gi|227179139|gb|EEI60111.1| aspartate racemase [Enterococcus faecium TX1330]
gi|257823220|gb|EEV50152.1| aspartate racemase [Enterococcus faecium 1,141,733]
gi|257832268|gb|EEV58689.1| aspartate racemase [Enterococcus faecium Com12]
gi|291608136|gb|EFF37442.1| aspartate racemase [Enterococcus faecium E980]
gi|292643687|gb|EFF61808.1| aspartate racemase [Enterococcus faecium PC4.1]
Length = 243
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 30/159 (18%)
Query: 66 FLFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGL 122
FL DI + +P V+ CNTA +EL++ + L A + +G
Sbjct: 64 FLLDDIEKQNLLRPNFIVLTCNTA-HYFFEELQAA-TDIPILHMPREAANELVRQHTTGR 121
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKEDEI 176
++IL T +++ + + + I ++ +I E ++ + +
Sbjct: 122 VAILGTEGSMKAGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEIL 181
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT------------HYP 203
++ +E EK ++L CT HYP
Sbjct: 182 EEAVERLNCEK-------VILGCTELSLMHEFAEDNHYP 213
>gi|306480495|emb|CBV36712.1| glutamate racemase [Helicobacter pylori v225d]
Length = 81
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I R F
Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLRQ--KYALKKNACAFP 58
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 KVEFHASGDVIWLEKQAKEWL 79
>gi|251797252|ref|YP_003011983.1| aspartate racemase [Paenibacillus sp. JDR-2]
gi|247544878|gb|ACT01897.1| aspartate racemase [Paenibacillus sp. JDR-2]
Length = 251
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ-SG 121
RL+ +L+ + V+ CNTA D++++ +++ A + +
Sbjct: 68 RLIQADIALLEHAEVSNIVMPCNTA-HRFFDDIQAMTAIPIVNMVRETVEELLAKHKANR 126
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKE 179
I IL+T AT++ S+++ Y + I S I++ E+ ++
Sbjct: 127 KIGILATDATIQTDIYSDVLRQYGLEPFIPSPSMQQSIMSIIYEDIKKTGHSDSRVLEGI 186
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
+ + ++ D +VLACT
Sbjct: 187 MTEML---QREKCDGVVLACT 204
>gi|261414956|ref|YP_003248639.1| aspartate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261371412|gb|ACX74157.1| aspartate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302325824|gb|ADL25025.1| aspartate racemase family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 229
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 47/139 (33%), Gaps = 2/139 (1%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + L+ VIA NT L+ R + L A +
Sbjct: 61 AAILADAAKRLECAGADFIVIATNTMHKLVPQIEREIH--IPILHIADAAATSVIRDGFT 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++L T T+ + + + + + + + + + V + D + E +
Sbjct: 119 KVALLGTKFTMTQDFIKDRLKGAGLEVIVPDAPDIEIVNNVIFNELCLGKVLDASRAEYQ 178
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 179 RIIESLKERGAECVILGCT 197
>gi|306480476|emb|CBV36694.1| glutamate racemase [Helicobacter pylori]
Length = 93
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 8/92 (8%)
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235
+ V++L CTH+PLI H + + D+I +
Sbjct: 2 RYYFTPLEILPKVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--K 59
Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 60 YALKKNACAFPRIEFHASGDVIWLEKQAKEWL 91
>gi|45358302|ref|NP_987859.1| Asp/Glu racemase:aspartate racemase [Methanococcus maripaludis S2]
gi|44921060|emb|CAF30295.1| Asp/Glu racemase:Aspartate racemase [Methanococcus maripaludis S2]
Length = 234
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 72/217 (33%), Gaps = 34/217 (15%)
Query: 14 NSILIFDSGIGGLI----------VLQKMRFLM--PEYH--FIYVADDVGFPYGNW-EDH 58
+I + IGGL + Q +R + P +Y D F +
Sbjct: 2 KTIGL----IGGLSWESTQEYYRIINQSIRDKLGAPHSAKCILYSVDFAEF---DKLSHD 54
Query: 59 A---LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
+ + + L+K +I NT T+ D + ++ + V A+ +
Sbjct: 55 EEWDVIAEKLTDIAKTLEKAGAEGILICTNTMHTVA-DSVSENI-NIPLVHIVDAVAEDI 112
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +L T T+ + + S + I ++ V ++
Sbjct: 113 KQKNIKKVGLLGTKFTMEQEFYS---GRLKEKHEIDVIIPSDEERDVVHNVIYKELVSGI 169
Query: 176 IKKEIEGCFIE----KEGKRTDVIVLACTHYPLIVHV 208
IK+E +++ + I+L CT PL++
Sbjct: 170 IKEESRQKYLKIIDNLVENGAEGIILGCTEIPLLIKQ 206
>gi|323484480|ref|ZP_08089846.1| aspartate racemase [Clostridium symbiosum WAL-14163]
gi|323692541|ref|ZP_08106774.1| aspartate racemase [Clostridium symbiosum WAL-14673]
gi|323402258|gb|EGA94590.1| aspartate racemase [Clostridium symbiosum WAL-14163]
gi|323503407|gb|EGB19236.1| aspartate racemase [Clostridium symbiosum WAL-14673]
Length = 225
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 42/129 (32%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K VI NT ++ T + + A ++ +++L T T
Sbjct: 66 LEKAGADYLVICTNTMHKVVPQI--QTHIQIPIIHIAEATADVLKESRIRKVALLGTKYT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + I + + V + + K++ + +
Sbjct: 124 MTQDFYKKKLTDAGIEVLIPEQPDIETVNNVIFKELCRGVVSENSKQQYLAIIDKLAAEG 183
Query: 192 TDVIVLACT 200
++L CT
Sbjct: 184 AQGVILGCT 192
>gi|225866744|ref|YP_002752122.1| aspartate racemase family protein [Bacillus cereus 03BB102]
gi|225790790|gb|ACO31007.1| aspartate racemase family protein [Bacillus cereus 03BB102]
Length = 224
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L EL+ + S+ L V Q
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFKELQQSI-SIPILNIVDETLQVIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +++L+T AT++ + I I + + + IK E E
Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQESINQIISCIKGGEIEKA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+E+ + + D ++ACT
Sbjct: 169 RELWNALVLQLKDEVDTAIIACT 191
>gi|299535194|ref|ZP_07048518.1| aspartate racemase [Lysinibacillus fusiformis ZC1]
gi|298729315|gb|EFI69866.1| aspartate racemase [Lysinibacillus fusiformis ZC1]
Length = 233
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 46/132 (34%), Gaps = 10/132 (7%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + I CNTA T E+ P + L + K+AA + IL+T
Sbjct: 73 LASVGAHIIAIPCNTAHTF-YQEIEEGSP-IPVLHMIRETAKRAADLGA-KRVGILATTG 129
Query: 131 TLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + + + S +++ + G + ++ + E
Sbjct: 130 TLTSRMYQEALEQFGITPVVPDNEMRSYVMSIIYDYVKAGKDVTLEDWQPIEEAMLAL-- 187
Query: 189 GKRTDVIVLACT 200
D IVL CT
Sbjct: 188 --NCDRIVLGCT 197
>gi|229048455|ref|ZP_04194020.1| amino-acid racemase [Bacillus cereus AH676]
gi|228722885|gb|EEL74265.1| amino-acid racemase [Bacillus cereus AH676]
Length = 235
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V Q+
Sbjct: 68 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQSIPE 124
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +++L+T AT++ + I I + + + + IK E E
Sbjct: 125 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEKA 179
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D +++ACT
Sbjct: 180 RKLWSALVVQLKDEVDTVIIACT 202
>gi|226312934|ref|YP_002772828.1| amino acid racemase [Brevibacillus brevis NBRC 100599]
gi|226095882|dbj|BAH44324.1| probable amino acid racemase [Brevibacillus brevis NBRC 100599]
Length = 228
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 67/172 (38%), Gaps = 21/172 (12%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L+K I CNTA + ++++++ S+ L + I++ ++ +++L+T
Sbjct: 70 LEKTDVDFIAIPCNTA-HIYFNQIKNSV-SVPILNMIDETIREIPKNSK--KVALLATNP 125
Query: 131 TLRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ + + + +++ +I E + + F +
Sbjct: 126 TVQSGIFQDALVREGYDFLHQDRWQTC---VNQIIAKIKQGQIDESLL---LWDEFYSEL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARRARCLLPR 236
+ D ++ACT ++ + ++D+ + ++ + L+ R
Sbjct: 180 AETIDTAIIACTDLNVVTDKISN----DISFVDSSTCLAQAVVHKYLSLMDR 227
>gi|154685011|ref|YP_001420172.1| hypothetical protein RBAM_005490 [Bacillus amyloliquefaciens FZB42]
gi|154350862|gb|ABS72941.1| RacX [Bacillus amyloliquefaciens FZB42]
Length = 226
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K I CNTA + ++++ + I + ++ ++L+T T
Sbjct: 70 LEKTGVDFIAIPCNTA-HIYFNQIKKSISVPLLNMVDETINKIPKGSKKA--ALLATVPT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILAS-RVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
++ ++ +H VS I +E+ G + + E+ EK
Sbjct: 127 VQSGIFQEALNREGYD-FLHQVSWQIYVDHIIEKIKQGQINEAGTLYDELHRELAEK--- 182
Query: 191 RTDVIVLACT 200
D +++ACT
Sbjct: 183 -VDTVIIACT 191
>gi|269956674|ref|YP_003326463.1| aspartate racemase [Xylanimonas cellulosilytica DSM 15894]
gi|269305355|gb|ACZ30905.1| aspartate racemase [Xylanimonas cellulosilytica DSM 15894]
Length = 242
Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 50/142 (35%), Gaps = 24/142 (16%)
Query: 72 LDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL--ISIL 126
L+ + L V+ CNTA + + + ++ F+ + +AA GL + +L
Sbjct: 73 LEGFGAELLVMPCNTAHYFTQQVLEAI-----TVPFVSIIDVTVEAALARVPGLTAVGLL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVS--------SMILASRVEEYACGIKIKEDEIKK 178
+T T+ + + ++I A ++ G+ D ++
Sbjct: 128 ATAGTVASRVYHDAFA--ARGVEVLTPDDDGTTGDQAIINAVIYDQVKAGLPADADALRA 185
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
+ V+VL CT
Sbjct: 186 VAAR----LVERGAGVVVLGCT 203
>gi|196044013|ref|ZP_03111250.1| probable amino-acid racemase [Bacillus cereus 03BB108]
gi|229187012|ref|ZP_04314163.1| amino-acid racemase [Bacillus cereus BGSC 6E1]
gi|196025349|gb|EDX64019.1| probable amino-acid racemase [Bacillus cereus 03BB108]
gi|228596464|gb|EEK54133.1| amino-acid racemase [Bacillus cereus BGSC 6E1]
Length = 224
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L EL+ + S+ L V Q
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFKELQQSI-SIPILNIVDETLQVIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +++L+T AT++ + I I + + + IK E E
Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQESINQIISCIKGGEIEKA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+E+ + + D ++ACT
Sbjct: 169 RELWNALVLQLKDEVDTAIIACT 191
>gi|91790218|ref|YP_551170.1| aspartate racemase [Polaromonas sp. JS666]
gi|91699443|gb|ABE46272.1| aspartate racemase [Polaromonas sp. JS666]
Length = 241
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 7/134 (5%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ--AAAYTQSGLISILS 127
L+ +VI CNTA +L+ + M + V ++ + A G I +L
Sbjct: 69 QFLESSGCSCAVIPCNTA-HYWYPDLQMSVK-MPLIHIVSSVVENLHARGIDGGRIGLLG 126
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE-DEIKKEIEGCFIE 186
TPAT+ + + + + + + +K E +
Sbjct: 127 TPATVNSGLYKDKLT--NAGYTVLPYTEDDVLQLCVRPIQAVKQNRLREAGTALADSVRV 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LYDRGATAVILGCT 198
>gi|229193040|ref|ZP_04319996.1| amino-acid racemase [Bacillus cereus ATCC 10876]
gi|228590487|gb|EEK48350.1| amino-acid racemase [Bacillus cereus ATCC 10876]
Length = 224
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFKELQRSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + + IK E E
Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D ++ACT
Sbjct: 169 RKLWSALVVQLKDEVDTAIIACT 191
>gi|238918933|ref|YP_002932447.1| aspartate racemase, [Edwardsiella ictaluri 93-146]
gi|238868501|gb|ACR68212.1| aspartate racemase, putative [Edwardsiella ictaluri 93-146]
Length = 239
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 44/129 (34%), Gaps = 4/129 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ VI CNTA DELR + + L V A + I +L+T AT
Sbjct: 71 LEQAGAECIVIPCNTA-HFWFDELRQSC-HVELLNIVGATLNEVCASGQRHIGLLATDAT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L I ++ +C +E ++ + +
Sbjct: 129 LYMGLYQQAIEAHGLRCIAPDRGGQEQV--MESIYALKAGDAGHARRLMARQADALFARG 186
Query: 192 TDVIVLACT 200
+IVL CT
Sbjct: 187 AQIIVLGCT 195
>gi|118479884|ref|YP_897035.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|118419109|gb|ABK87528.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
Length = 224
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L EL+ + S+ L V Q
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFKELQQSI-SIPILNIVDETLQVIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +++L+T AT++ + I I + + + IK E E
Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHHEKWQESINQIISCIKGGEIEKA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+E+ + + D ++ACT
Sbjct: 169 RELWNALVLQLKDEVDTAIIACT 191
>gi|206969422|ref|ZP_03230376.1| aspartate racemase family protein [Bacillus cereus AH1134]
gi|206735110|gb|EDZ52278.1| aspartate racemase family protein [Bacillus cereus AH1134]
Length = 224
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT++ + I I + + + + IK E E
Sbjct: 114 TA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
++ + + D ++ACT
Sbjct: 169 HKLWNALVVQLKDEVDTAIIACT 191
>gi|56965360|ref|YP_177092.1| aspartate racemase [Bacillus clausii KSM-K16]
gi|56911604|dbj|BAD66131.1| aspartate racemase [Bacillus clausii KSM-K16]
Length = 226
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 11/141 (7%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+ + + L+K I CNTA + D+++++ IK+ S
Sbjct: 60 EMAIINGAKRLEKTGVDFIAIPCNTA-HVYFDQVKNSLSIPLLNMVEETIKRVPE--HSK 116
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+++L+T T++ + + + + +E+ G + E+ E
Sbjct: 117 KVALLATIPTVQSGIFQEALAKEGYEFLHQDDWQTCIN--QIIEKIKQGQISESLELWDE 174
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
+ + D ++ACT
Sbjct: 175 L--YL--QLADTIDTAIIACT 191
>gi|84498424|ref|ZP_00997194.1| putative aspartate racemase [Janibacter sp. HTCC2649]
gi|84381167|gb|EAP97051.1| putative aspartate racemase [Janibacter sp. HTCC2649]
Length = 235
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 21/170 (12%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTP 129
L++ + CNTA + + ++ + V +AA G + IL+T
Sbjct: 73 LERAGAKFIALPCNTA--QAFQDEVAAAVTIPVIDIVAVTVEAAKAAVPGLTTLGILATD 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILA-----SRVEEYA-CGIKIKEDEIKKEIEGC 183
TLR H + ++ + S + + G+ + D +E
Sbjct: 131 GTLRAETY----HRAAEAAGLTPIAPDDVVQKDVMSMIYDGVKAGMPVSRDRFDAAVE-- 184
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
K IVL CT ++ ++ V +D+ D++A R L
Sbjct: 185 --HLRTKGAGAIVLGCTELSILQTDL-KVDEPDV--VDSLDALAARTVVL 229
>gi|121533969|ref|ZP_01665795.1| aspartate racemase [Thermosinus carboxydivorans Nor1]
gi|121307480|gb|EAX48396.1| aspartate racemase [Thermosinus carboxydivorans Nor1]
Length = 230
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 3/138 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +A NTA ++ DE+ S P + + V + A + I T T
Sbjct: 71 LAAGGAEFAAMAANTA-HIVFDEVNSQSP-LPLISIVDETCKYAQSKNCKSVVIFGTAFT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSM-ILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ SN Y + + + + + ++ + ++ K
Sbjct: 129 MSSGLYSNAFAKYGIDAFVPTADEQKAIHNIIFPNLQAGIVLPEDKRTILQIAKRMIAEK 188
Query: 191 RTDVIVLACTHYPLIVHV 208
D +VL CT PLI+
Sbjct: 189 NADALVLGCTELPLIIQE 206
>gi|300119117|ref|ZP_07056822.1| aspartate racemase [Bacillus cereus SJ1]
gi|298723511|gb|EFI64248.1| aspartate racemase [Bacillus cereus SJ1]
Length = 223
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ I CNTA L +EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAIPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT+R + I + + + IK E +
Sbjct: 114 TA-KRVALLATEATVRAEIYQDGIAKRNIDYIHYEQ----WQESINQIITYIKSGEVKEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+ + + D ++ACT
Sbjct: 169 HRLWDALVLQLKNEVDTAIIACT 191
>gi|227822529|ref|YP_002826501.1| aspartate racemase protein [Sinorhizobium fredii NGR234]
gi|227341530|gb|ACP25748.1| aspartate racemase protein [Sinorhizobium fredii NGR234]
Length = 239
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 39/140 (27%), Gaps = 10/140 (7%)
Query: 65 MFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ + L +I NT A + + + + S
Sbjct: 66 LSEVARALQSGGADCVLICTNTMHLIADAVAASV------DIPLINIIDETALRLKERGS 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+L+T T+ + + + ++ + L + D ++ +
Sbjct: 120 RRPLLLATRYTMEHGFYAERMKAHGIDLIVPDADGRKLTHEIIFDELCAGKVLDTSREAL 179
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + D ++L CT
Sbjct: 180 MTLIETAKAEGADAVILGCT 199
>gi|298717599|ref|YP_003730241.1| aspartate/glutamate racemase [Pantoea vagans C9-1]
gi|298361788|gb|ADI78569.1| putative aspartate/glutamate racemase [Pantoea vagans C9-1]
Length = 246
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 3/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L++ V+ NT + S + L A + +
Sbjct: 79 ILAEAARNLERAGAQFIVLCTNTMHKVAAQI--SAATGIPLLHIADATGRRIQQAGIRKV 136
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+T T+ + + L + + + + V + + ++
Sbjct: 137 GLLATRFTMEQDFYHGRLQQQFGLEVMTPDEADRLFVHEVIYHELCLGEINPASRRRYRE 196
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 197 IMQSLVAQGAEAIILGCT 214
>gi|115384100|ref|XP_001208597.1| predicted protein [Aspergillus terreus NIH2624]
gi|114196289|gb|EAU37989.1| predicted protein [Aspergillus terreus NIH2624]
Length = 237
Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 48/155 (30%), Gaps = 9/155 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ ++ACNT + + ++ L V A Q + +L + T
Sbjct: 73 LEAAGADFFLVACNTMHMVAAQI--AAHTTIPMLHIVDATAQKIVEAGHKTVGLLGSRYT 130
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ Y S L +Y + + DE + +G +
Sbjct: 131 MTGDYFSGRLSSNYGLDVLVPDEKQQEDVHSALFNELARGVFRDETRMLFKGVMESLVER 190
Query: 191 RTDVIVLACTHYPLI-VHVFRQLSPWPVDWLDNSD 224
VI+L CT + L+ PV LD
Sbjct: 191 GAQVIILGCTEFGLLVREE-----DSPVPILDTGA 220
>gi|229127621|ref|ZP_04256610.1| hypothetical protein bcere0015_20700 [Bacillus cereus BDRD-Cer4]
gi|228655698|gb|EEL11547.1| hypothetical protein bcere0015_20700 [Bacillus cereus BDRD-Cer4]
Length = 230
Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 51/140 (36%), Gaps = 8/140 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L K +I NT ++ ++++ + L A + +
Sbjct: 63 ILGNVAYSLQKGGADFIIICTNTMHKVV-EKIKEKI-DIPVLHIADATAKEIKRKDIQKV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180
+L T T+ + + + I + + + ++ + V E I ++ E K +
Sbjct: 121 GLLGTKYTMEQDFYKSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKIVVQSREYYKRV 180
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+++ + +L CT
Sbjct: 181 IEELVQEGAQGI---ILGCT 197
>gi|91224669|ref|ZP_01259930.1| aspartate racemase [Vibrio alginolyticus 12G01]
gi|91190557|gb|EAS76825.1| aspartate racemase [Vibrio alginolyticus 12G01]
Length = 232
Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 42/155 (27%), Gaps = 13/155 (8%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++K +I NT + ++ L A + + +L T T
Sbjct: 71 IEKGGADFILICTNTMHKVASQI--EASINIPILHIADATAELLREKGVQKVGLLGTQFT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + L Y I + ++E + + + +
Sbjct: 129 MEQDFYKGRLSDRYGLDVVIPDQDDRSKVHNIIYKELCQGEIKEESRTIYLQIIEKLKEQ 188
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222
+ ++L CT L V LD
Sbjct: 189 GAEAVILGCT-------EIALLVNQSHTDVTLLDT 216
>gi|306480201|emb|CBV36430.1| glutamate racemase [Helicobacter pylori]
Length = 81
Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 58
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 KVEFHASGDVIWLEKQAKEWL 79
>gi|255994450|ref|ZP_05427585.1| aspartate racemase [Eubacterium saphenum ATCC 49989]
gi|255993163|gb|EEU03252.1| aspartate racemase [Eubacterium saphenum ATCC 49989]
Length = 249
Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 22/196 (11%)
Query: 48 VGFPYGNWEDHALKKRLMFLF------SDILDKYQPVLSVIACNTAFT------LIKDEL 95
P + + + + L + VI CNT+ +
Sbjct: 54 ASMP--DRTEAIIADETDEIVYKLYRDFKFLVQSGADKIVIPCNTSHVFIKKVFAFLKGM 111
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
+ S FL + + +G + + +T T+ + H+
Sbjct: 112 DNITGSEYFLDMIDGV--LKNLNGAGDVYLWATDGTVMSGVYEERLADVGVSLHLPEKLE 169
Query: 156 MILASRVE-EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
L +V +Y K +E K +E + + ++L CT ++ L
Sbjct: 170 QELVMKVIYDYIKKGKTPPEEDIKILERKVFSGDAR---SVILGCTELSMLKK--SGLLS 224
Query: 215 WPVDWLDNSDSIARRA 230
+ ++D + IA+ A
Sbjct: 225 DEIRYIDPIEIIAKEA 240
>gi|306479661|emb|CBV35909.1| glutamate racemase [Helicobacter pylori]
Length = 80
Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 8/80 (10%)
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDD 247
V++L CTH+PLI + + D+I + F
Sbjct: 1 VVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPK 58
Query: 248 HALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 VEFHASGDVVWLEKQAKEWL 78
>gi|271965998|ref|YP_003340194.1| aspartate racemase [Streptosporangium roseum DSM 43021]
gi|270509173|gb|ACZ87451.1| aspartate racemase [Streptosporangium roseum DSM 43021]
Length = 301
Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 16/178 (8%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + L + CNTA + + + + A A +L+T
Sbjct: 80 EALKQAGCELLAVPCNTAHAFVPRLADEA--GLELVSIIEVTADALAADGVRAAGVLATS 137
Query: 130 ATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL ++ + V+ + + + G + ++ +
Sbjct: 138 GTLHAGLYADALRRRGVAVIEPDEPGQRQVTAAIGAVKSGG--VQPAHRRALAELSRSLA 195
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-------RCLLPRINT 239
+ + +V ACT L++ + R P V LD + +ARR + LLPR +
Sbjct: 196 DRGAERVVTACT--ELVLALDRSRVP--VPVLDPARLLARRVVGLALGAQRLLPRRHN 249
>gi|227891689|ref|ZP_04009494.1| aspartate racemase [Lactobacillus salivarius ATCC 11741]
gi|227866492|gb|EEJ73913.1| aspartate racemase [Lactobacillus salivarius ATCC 11741]
Length = 237
Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 21/127 (16%)
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATLRRTYTSNLIH 142
CNTA DEL++ A++Q + + I++T TL I
Sbjct: 84 CNTA-HYFYDELQAAVDVPVLHMPRLAVEQIKKDYPNAKRVGIVATNGTLHDGVYDKEIL 142
Query: 143 SYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKK--EIEGCFI------EKEGKRTD 193
+ L E A +++ D+IK+ ++G + ++ D
Sbjct: 143 D----------AGYELVKPTAEIQAKTMELIYDDIKEKDYVDGKLFYELVEDMVKDEKCD 192
Query: 194 VIVLACT 200
++L CT
Sbjct: 193 AVILGCT 199
>gi|218897190|ref|YP_002445601.1| aspartate racemase family protein [Bacillus cereus G9842]
gi|218545872|gb|ACK98266.1| aspartate racemase family protein [Bacillus cereus G9842]
Length = 231
Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A +A + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHVADATAKAIKRKDIQKVGLLGTTYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + I + + + ++V E G + + ++ + E
Sbjct: 129 MEQDFYKSRIEENNIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYKRVIEELVQ 186
Query: 190 KRTDVIVLACT 200
K I+L CT
Sbjct: 187 KGAQGIILGCT 197
>gi|14590552|ref|NP_142620.1| aspartate racemase [Pyrococcus horikoshii OT3]
gi|21465704|pdb|1JFL|A Chain A, Crystal Structure Determination Of Aspartate Racemase From
An Archaea
gi|21465705|pdb|1JFL|B Chain B, Crystal Structure Determination Of Aspartate Racemase From
An Archaea
gi|3257078|dbj|BAA29761.1| 228aa long hypothetical aspartate racemase [Pyrococcus horikoshii
OT3]
Length = 228
Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 41/130 (31%), Gaps = 5/130 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ ++ CNTA + +++R + + + + +L+T T
Sbjct: 70 LEECGADFIIMPCNTAHAFV-EDIRKAIK-IPIISMIEETAKKVKELGFKKAGLLATTGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASR-VEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ Y + R + E +K ++ + E +
Sbjct: 128 IVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKAGNLKLG--RELLLKTAKILEER 185
Query: 191 RTDVIVLACT 200
+ I+ CT
Sbjct: 186 GAECIIAGCT 195
>gi|224372895|ref|YP_002607267.1| amino acid racemase [Nautilia profundicola AmH]
gi|223588963|gb|ACM92699.1| amino acid racemase [Nautilia profundicola AmH]
Length = 225
Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 5/139 (3%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+K +I NT + D ++++ ++ + A +A
Sbjct: 61 AKILANAAKSLEKAGADFIMITTNTMHKVA-DYVKNSI-NLPLIDIRDATAEAVKKAGVD 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T+ + + + + +V + I +D KKE
Sbjct: 119 NVLLLGTKFTMEDDFYVEYLKRKDLNVTVPNLEHRNFIHKVIFDELCLGITKDNSKKE-- 176
Query: 182 GCFIEKEGKRTDVIVLACT 200
D ++L CT
Sbjct: 177 -FLKIINSYNVDGVILGCT 194
>gi|229043964|ref|ZP_04191657.1| hypothetical protein bcere0027_20050 [Bacillus cereus AH676]
gi|229109665|ref|ZP_04239251.1| hypothetical protein bcere0018_19260 [Bacillus cereus Rock1-15]
gi|228673706|gb|EEL28964.1| hypothetical protein bcere0018_19260 [Bacillus cereus Rock1-15]
gi|228725375|gb|EEL76639.1| hypothetical protein bcere0027_20050 [Bacillus cereus AH676]
Length = 230
Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKEKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + + ++ + V E I ++ E K + +++
Sbjct: 129 MEQDFYKSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKIVVQSREYYKRVIEELVQEG 188
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 189 AQGI---ILGCT 197
>gi|261344626|ref|ZP_05972270.1| putative aspartate racemase [Providencia rustigianii DSM 4541]
gi|282567542|gb|EFB73077.1| putative aspartate racemase [Providencia rustigianii DSM 4541]
Length = 235
Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 33/150 (22%)
Query: 67 LFSDILDKYQPV---LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
L D L + + VI CNTA DEL+ + + L + A TQ I
Sbjct: 63 LMEDYLQRLEVAGAECIVIPCNTA-HFWFDELKKSC-HVEILSIIEATMNEVISTQKNKI 120
Query: 124 SILSTPATLRRTYTSNLIHS-----YVSQCH--------IHLVSSMILASRVEEYACGIK 170
+L+T AT+ I I+L+ S
Sbjct: 121 GLLATDATMHMGLYQQSIEDQGLICIKPDNENQKMIMKSIYLLKSGEF-----------S 169
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ ED +KK+ + F ++IVL CT
Sbjct: 170 LAEDIMKKQADILF----SNGAEIIVLGCT 195
>gi|75761380|ref|ZP_00741353.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228900814|ref|ZP_04065029.1| hypothetical protein bthur0014_20160 [Bacillus thuringiensis IBL
4222]
gi|74491146|gb|EAO54389.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228858740|gb|EEN03185.1| hypothetical protein bthur0014_20160 [Bacillus thuringiensis IBL
4222]
Length = 231
Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A +A + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKAIKRKDIQKVGLLGTTYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMIL---ASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + + +E I + E K + ++K
Sbjct: 129 MEQDFYKSSIEENNIKVIVPSEKNRKEINKVIYIELCLGKIVSQSREYYKRVIEELVQKG 188
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 189 AQGI---ILGCT 197
>gi|269960038|ref|ZP_06174415.1| hypothetical protein VME_07990 [Vibrio harveyi 1DA3]
gi|269835337|gb|EEZ89419.1| hypothetical protein VME_07990 [Vibrio harveyi 1DA3]
Length = 232
Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/171 (11%), Positives = 55/171 (32%), Gaps = 13/171 (7%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + ++ +I NT + D+++ ++ + A + +
Sbjct: 63 ILSQAAKSVEAGGADFILICTNTMHKVA-DQIQQAV-NVPLVHIADATAEKLVADGIEKV 120
Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T+ + + LI + + + + V ++ +++
Sbjct: 121 GLLGTRFTMEQDFYKQRLIDKFGVDVVVPSSNDQTIVHEVIYNELCKGEVREDSRQQYLT 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRA 230
+ + + ++L CT L V D ++ A+ A
Sbjct: 181 IIDKLVEEGAEAVILGCT-------EIAMLVEPQHTEVKLYDTTEIHAKAA 224
>gi|218236145|ref|YP_002369551.1| aspartate racemase family protein [Bacillus cereus B4264]
gi|218164102|gb|ACK64094.1| aspartate racemase family protein [Bacillus cereus B4264]
Length = 224
Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQAIPK 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+++L+T AT++ + I I + + + + IK E E
Sbjct: 114 NA-KRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVEKA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D ++ACT
Sbjct: 169 RKLWSALVVQLKDEVDTAIIACT 191
>gi|297193998|ref|ZP_06911396.1| aspartate racemase [Streptomyces pristinaespiralis ATCC 25486]
gi|297152054|gb|EFH31504.1| aspartate racemase [Streptomyces pristinaespiralis ATCC 25486]
Length = 229
Score = 49.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 9/153 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+ L +I NT + + L A +A +
Sbjct: 63 ILASAARGLEAAGADLLLICTNTMHKVAGQV--EAAVRVPLLHLADATAEAVKARGLTRV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + + + L RV + + DE + +
Sbjct: 121 GLLGTAFTMEQDFYRARLAGHGLEVLTPDAEGRALVHRVIYDELCLGVVRDESRARYQDV 180
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP 216
E + +VL CT L
Sbjct: 181 IGELVAAGAEGVVLGCT-------EIELLIGPD 206
>gi|229828743|ref|ZP_04454812.1| hypothetical protein GCWU000342_00809 [Shuttleworthia satelles DSM
14600]
gi|229793337|gb|EEP29451.1| hypothetical protein GCWU000342_00809 [Shuttleworthia satelles DSM
14600]
Length = 237
Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
+++RL+ IL+ I CNT D L+ ++ + A
Sbjct: 65 VEERLLKDC-KILETCGCSAIAIPCNT-SHYFADRLQDQL-TVPIIHMPRRTVLRLADAG 121
Query: 120 SGLISILSTPATLRRTYTSNLIH-----SYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
++IL+T T+ + +Y ++ ++ G +
Sbjct: 122 KKKVAILATDGTIVTGVYRKALEAAGIVAYEPDSQTQKKVMSLIYDEIKAGEKGNRHTFA 181
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200
I + + D +L CT
Sbjct: 182 AIDRAVRE-------AGCDGAILGCT 200
>gi|306480355|emb|CBV36577.1| glutamate racemase [Helicobacter pylori]
Length = 81
Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 58
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 RVEFHASGDVIWLEKQAKEWL 79
>gi|300213953|gb|ADJ78369.1| Aspartate racemase [Lactobacillus salivarius CECT 5713]
Length = 224
Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 21/127 (16%)
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATLRRTYTSNLIH 142
CNTA DEL++ A++Q + + I++T TL I
Sbjct: 71 CNTA-HYFYDELQAAVDVPVLHMPRLAVEQIKKDYPNAKRVGIVATNGTLHDGVYDKEIL 129
Query: 143 SYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKK--EIEGCFI------EKEGKRTD 193
+ L E A +++ D+IK+ ++G + ++ D
Sbjct: 130 D----------AGYELVKPTAEIQAKTMELIYDDIKEKDYVDGKLFYELVEDMVKDEKCD 179
Query: 194 VIVLACT 200
++L CT
Sbjct: 180 AVILGCT 186
>gi|150397172|ref|YP_001327639.1| aspartate racemase [Sinorhizobium medicae WSM419]
gi|150028687|gb|ABR60804.1| aspartate racemase [Sinorhizobium medicae WSM419]
Length = 239
Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 50/150 (33%), Gaps = 9/150 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G W++ AL+ + + L +I NT + + + + +
Sbjct: 57 GRWDEAALR---LSDVARGLVAGGADCILICTNTM--HLIADAVQRSVDVPLINIIDETA 111
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIK 170
Q S +L+T T+ + + + ++ + + L V +E G
Sbjct: 112 QRLKSAGSRKPLLLATRYTMEHGFYAERMKTHGIDLMVPDAAGRTLTHNVIFDELCAGRV 171
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ + + + + D ++L CT
Sbjct: 172 LDSS--RDALIALIEKAKADGADAVILGCT 199
>gi|90961008|ref|YP_534924.1| aspartate racemase [Lactobacillus salivarius UCC118]
gi|301299506|ref|ZP_07205779.1| aspartate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|90820202|gb|ABD98841.1| Aspartate racemase [Lactobacillus salivarius UCC118]
gi|300852896|gb|EFK80507.1| aspartate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 237
Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 27/130 (20%)
Query: 84 CNTAFTLIKDELRSTFPSMAFLGA----VPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
CNTA DEL++ + L V IKQ Y + + I++T TL
Sbjct: 84 CNTA-HYFYDELQAAV-DVPVLHMPRLAVEQIKQ--DYPNAKRVGIVATNGTLHDGVYDK 139
Query: 140 LIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKK--EIEGCFI------EKEGK 190
I + L E A +++ D+IK+ ++G + +
Sbjct: 140 EILD----------AGYELVKPTAEIQAKTMELIYDDIKEKDYVDGKLFYELVEDMVKDE 189
Query: 191 RTDVIVLACT 200
+ D ++L CT
Sbjct: 190 KCDAVILGCT 199
>gi|229115704|ref|ZP_04245109.1| hypothetical protein bcere0017_19970 [Bacillus cereus Rock1-3]
gi|228667846|gb|EEL23283.1| hypothetical protein bcere0017_19970 [Bacillus cereus Rock1-3]
Length = 232
Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 4/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L K +I NT ++ ++++ ++ L + I
Sbjct: 63 VLGNAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADTTAKEIKRKGIQTI 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T+ + + + I + + + L + C KI ++ +
Sbjct: 121 GLLGTKYTMEQDFYKSRIEENNIKVIVPVEKNREKLNEIIYTELCLGKITSQS-REYYKR 179
Query: 183 CFIEKEGKRTDVIVLACT 200
E K I+L CT
Sbjct: 180 VIEELVQKGAQGIILGCT 197
>gi|228907954|ref|ZP_04071805.1| hypothetical protein bthur0013_21180 [Bacillus thuringiensis IBL
200]
gi|228851713|gb|EEM96516.1| hypothetical protein bthur0013_21180 [Bacillus thuringiensis IBL
200]
Length = 230
Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 49/139 (35%), Gaps = 6/139 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L K +I NT ++ +++ + L A + +
Sbjct: 63 VLANAAYSLQKGGADFIIICTNTMHKVV-GKIKEKI-DIPVLHIADATAKEIKRKDIQKV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIE 181
+L T T+ + + + I + + + ++ + V E G + + ++ +
Sbjct: 121 GLLGTKYTMEQDFYKSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKIVSQS--REYYK 178
Query: 182 GCFIEKEGKRTDVIVLACT 200
E K I+L CT
Sbjct: 179 RVIEELVQKGAQGIILGCT 197
>gi|229074908|ref|ZP_04207917.1| hypothetical protein bcere0024_19430 [Bacillus cereus Rock4-18]
gi|228708245|gb|EEL60409.1| hypothetical protein bcere0024_19430 [Bacillus cereus Rock4-18]
Length = 232
Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 4/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L K +I NT ++ ++++ ++ L + I
Sbjct: 63 VLGNAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADTTAKEIKRKGIQTI 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T+ + + + I + + + L + C KI ++ +
Sbjct: 121 GLLGTKYTMEQDFYKSRIEENNIKVIVPVEKNREKLNEIIYTELCLGKITSQS-REYYKR 179
Query: 183 CFIEKEGKRTDVIVLACT 200
E K I+L CT
Sbjct: 180 VIEELVQKGAQGIILGCT 197
>gi|229096725|ref|ZP_04227696.1| hypothetical protein bcere0020_19720 [Bacillus cereus Rock3-29]
gi|229102827|ref|ZP_04233523.1| hypothetical protein bcere0019_19810 [Bacillus cereus Rock3-28]
gi|228680612|gb|EEL34793.1| hypothetical protein bcere0019_19810 [Bacillus cereus Rock3-28]
gi|228686931|gb|EEL40838.1| hypothetical protein bcere0020_19720 [Bacillus cereus Rock3-29]
Length = 232
Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 4/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L K +I NT ++ ++++ ++ L + I
Sbjct: 63 VLGNAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADTTAKEIKRKGIQTI 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T+ + + + I + + + L + C KI ++ +
Sbjct: 121 GLLGTKYTMEQDFYKSRIEENNIKVIVPVEKNREKLNEIIYTELCLGKITSQS-REYYKR 179
Query: 183 CFIEKEGKRTDVIVLACT 200
E K I+L CT
Sbjct: 180 VIEELVQKGAQGIILGCT 197
>gi|306480292|emb|CBV36518.1| glutamate racemase [Helicobacter pylori]
Length = 78
Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 8/78 (10%)
Query: 196 VLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+L CTH+PLI H + + D+I + F
Sbjct: 1 ILGCTHFPLIAHQIEGYFMGHFALSTPPLLIHSGDAIVEYLQQ--KYTLKKNAHAFPKVE 58
Query: 250 LFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 FHASGDVIWLEKQAKEWL 76
>gi|126738048|ref|ZP_01753769.1| Asp/Glu/Hydantoin racemase family protein [Roseobacter sp.
SK209-2-6]
gi|126720545|gb|EBA17250.1| Asp/Glu/Hydantoin racemase family protein [Roseobacter sp.
SK209-2-6]
Length = 248
Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 9/136 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ +VIA NT + R +M L A A + ++ T T
Sbjct: 84 LEVAGCDFAVIASNTPHARLHSITRGV--AMPVLSIYEATASAVLLAGAKKALVIGTSVT 141
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L+ S ++ + I + + E A + + ++ +
Sbjct: 142 LQSPNYSQVMTEHS----IRTLGPLPEEEIAEAQAMIDEDFHGGASENARERLLQFCHRN 197
Query: 192 TD---VIVLACTHYPL 204
+ ++LACT PL
Sbjct: 198 AEPGTAVILACTELPL 213
>gi|296502791|ref|YP_003664491.1| aspartate racemase [Bacillus thuringiensis BMB171]
gi|296323843|gb|ADH06771.1| aspartate racemase [Bacillus thuringiensis BMB171]
Length = 230
Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 47/131 (35%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKEKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + I + + + ++ + V E G + + ++ + E
Sbjct: 129 MEQDFYKSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKTVVQS--REYYKRVIEELVQ 186
Query: 190 KRTDVIVLACT 200
+ I+L CT
Sbjct: 187 EGAQGIILGCT 197
>gi|209520721|ref|ZP_03269470.1| aspartate racemase [Burkholderia sp. H160]
gi|209498846|gb|EDZ98952.1| aspartate racemase [Burkholderia sp. H160]
Length = 232
Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 45/134 (33%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ L ++A NT + + ++ ++ FL A + +L
Sbjct: 67 AARQLERGGADLVILATNTMHRVCESIEQA--ITVPFLHIADPTGAALRAAGVERVGLLG 124
Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ +T YT L Y + R+ +D +K +
Sbjct: 125 TRYTMEQTFYTGRLRERYGLDTLVPDDDERADVHRIIYDELCHGNVDDASRKVYQRVIEH 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAARGAQAVILGCT 198
>gi|228958494|ref|ZP_04120214.1| hypothetical protein bthur0005_20000 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801121|gb|EEM48018.1| hypothetical protein bthur0005_20000 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 230
Score = 49.2 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 48/131 (36%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKEKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + ++ I + + + ++ + V E G + + ++ + E
Sbjct: 129 MEQDFYNSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKIVVQS--REYYKRAIEELVQ 186
Query: 190 KRTDVIVLACT 200
+ I+L CT
Sbjct: 187 EGAQGIILGCT 197
>gi|94971619|ref|YP_593667.1| aspartate racemase [Candidatus Koribacter versatilis Ellin345]
gi|94553669|gb|ABF43593.1| Aspartate racemase [Candidatus Koribacter versatilis Ellin345]
Length = 230
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 42/141 (29%), Gaps = 17/141 (12%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ +I NT T + + L +A T + +L
Sbjct: 67 AAKRLERGGADCVLICANTMHTAAPEV--EAAVKIPLLHLCDVTAEAILRTVKKEVGLLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVE-------EYACGIKIKEDEIKKE 179
T T+ + L + + + R E E G + E K++
Sbjct: 125 TAFTMEMPFYKDRLTQKFGLEVLV-----PNDVDRAETHRIIFDELVHGRVLPES--KQK 177
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
++ I+L CT
Sbjct: 178 YREIIGRLIADGSEAIILGCT 198
>gi|305666777|ref|YP_003863064.1| Asp/Glu racemase:Aspartate racemase [Maribacter sp. HTCC2170]
gi|88709001|gb|EAR01235.1| Asp/Glu racemase:Aspartate racemase [Maribacter sp. HTCC2170]
Length = 231
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 62/181 (34%), Gaps = 13/181 (7%)
Query: 54 NWED-HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
L + + + + VL + A NT L D ++ ++ L
Sbjct: 53 EKSQWDLLNQDFAEMANKLEQAGAEVLLICA-NTM-HLCADAIKEKV-TIPLLHIADVCG 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + +L T T+ + +++ Y + I + V I
Sbjct: 110 EEITSKGCKKVLLLGTKYTMELDFYKDILKNQYGIEVMIPSKEDREVVHDVIYTELAKGI 169
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIA 227
++ KK+ + + E + + ++L CT PL+ +Q + +D +++
Sbjct: 170 ISEDSKKQYKDIIKKSEEEGVEAVILGCTEIPLL---IQQE-DCSIPVIDTTKIHAEAAV 225
Query: 228 R 228
+
Sbjct: 226 K 226
>gi|319795600|ref|YP_004157240.1| peptidoglycan-binding lysin domain [Variovorax paradoxus EPS]
gi|315598063|gb|ADU39129.1| Peptidoglycan-binding lysin domain [Variovorax paradoxus EPS]
Length = 6514
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 81/240 (33%), Gaps = 27/240 (11%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPE-----YHFIYVADDVGFPYGNWED---- 57
P + ++ + +FDSG GG++ +++ + E + + D YG
Sbjct: 4618 PDLRGVRLRLGVFDSGNGGILAAAEIKRGVEERTGARVDLVIIGDHGAGTYGELGRVGGV 4677
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ--AA 115
A+ R + D L V+ CNTA T D+ + + + + + ++
Sbjct: 4678 TAIADRTNG-GLQVGDALGIHLMVMGCNTACTSGLDQY-ARGIGVPVVDLILSTREFHKG 4735
Query: 116 AYTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLV----SSMILASRVEEYACG-- 168
+ ST T +NLI Y + V + LA V +
Sbjct: 4736 LVDAGERVVAFSTEPTATLPLPGTNLIGVYR-DNEVLPVGGTDAGFDLAGIVNVFLADPM 4794
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLA--CTHYP----LIVHVFRQLSPWPVDWLDN 222
+ ++ + + + DV ++ CTHYP Q V ++
Sbjct: 4795 NPALQQRMQDAADHYADKILAAKPDVTTVSWCCTHYPELERFFAKSLAQRGRSDVKMVNP 4854
>gi|163791277|ref|ZP_02185692.1| Aspartate racemase [Carnobacterium sp. AT7]
gi|159873481|gb|EDP67570.1| Aspartate racemase [Carnobacterium sp. AT7]
Length = 234
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 8/127 (6%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
QP VI CNTA +EL P + + + +A + I + + TL
Sbjct: 76 QPAFIVIPCNTA-HYFIEELEKATP-IPIVNMIKETVKAIPSNFNKKIGLAVSQGTLESQ 133
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK--EIEGCFIEKEGKRTD 193
+ + + ++L ++ IKE I E E ++
Sbjct: 134 LYEREL--LAKGFEVI-LPDIVLQDKI-NQLIYTFIKEQAIMNLFLYEEILEEFHSMGSE 189
Query: 194 VIVLACT 200
+L CT
Sbjct: 190 TTLLGCT 196
>gi|196032953|ref|ZP_03100366.1| probable amino-acid racemase [Bacillus cereus W]
gi|195994382|gb|EDX58337.1| probable amino-acid racemase [Bacillus cereus W]
Length = 224
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 66/173 (38%), Gaps = 17/173 (9%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V +A
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +++L+T AT+R + I + + + IK E +
Sbjct: 114 TA-KRVALLATEATVRAEIYQDGIAKRNIDYIYYEQ----WQESINQIITYIKSGEVKEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + + D ++ACT ++ + D++D++ +A+
Sbjct: 169 HRLWDALVLQLKDEVDTAIIACTDLNVVANE---------DFVDSAQCLAKAV 212
>gi|160899935|ref|YP_001565517.1| aspartate racemase [Delftia acidovorans SPH-1]
gi|160365519|gb|ABX37132.1| aspartate racemase [Delftia acidovorans SPH-1]
Length = 238
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 4/101 (3%)
Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR 161
+ FL + AA + +L T T+ + + + + + + R
Sbjct: 107 IPFLHIADPVADAARTRGYRKLGLLGTRFTMEQPFMRERLQQQGLEVLVPQEADRAEVHR 166
Query: 162 V--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ EE G ++E ++ + + G+ +VL CT
Sbjct: 167 IIYEELCTGRILEES--RRTYQRIMAQLAGQGAQAMVLGCT 205
>gi|91762966|ref|ZP_01264931.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1002]
gi|91718768|gb|EAS85418.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1002]
Length = 248
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K VI CNTA +D + + + I+ + ++ I +L+T T
Sbjct: 84 LEKSGCKFIVIPCNTAHYWYEDLKKKIKIPIINMPKEVFIQTKKSCKKNSKIGLLATEGT 143
Query: 132 LRRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACG-IKIKEDEIKKEIEGCFIEKEG 189
L+ + YV + + + + ++ G IK+ E IK I+ I+++
Sbjct: 144 LKTEIYDKIFKKDYVLIKPLSNLQTSSVNKTIKHVKMGNIKLAEKTIKPAIK-YLIKQKC 202
Query: 190 KRTDVIVLACT 200
K+ +L CT
Sbjct: 203 KKI---ILGCT 210
>gi|307545726|ref|YP_003898205.1| aspartate racemase [Halomonas elongata DSM 2581]
gi|307217750|emb|CBV43020.1| aspartate racemase [Halomonas elongata DSM 2581]
Length = 231
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 41/132 (31%), Gaps = 7/132 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ + +IA NT + + + + L A + + +L T T
Sbjct: 71 IEAAGADMLLIATNTMHKVAPEVADA--IDIPLLHIADATGERLVADGMRRVGLLGTRFT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + L + + + RV EE G K E
Sbjct: 129 MEQDFYKARLTERFGIEVLVPEEEQRQRVHRVIYEELCQGRIEPRS--KTEYLEIIESLR 186
Query: 189 GKRTDVIVLACT 200
+ + ++L CT
Sbjct: 187 QRGVEAVILGCT 198
>gi|226357715|ref|YP_002787454.1| aspartate racemase [Deinococcus deserti VCD115]
gi|226319957|gb|ACO47950.1| putative aspartate racemase [Deinococcus deserti VCD115]
Length = 243
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 67/173 (38%), Gaps = 11/173 (6%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-- 121
++ + L V+ CNTA +D L +T ++ F+ + + AA Q G
Sbjct: 63 VLAQMARGLQASGADFLVMVCNTAHAFEEDILNAT--TLPFVSLIEETRDAALREQPGLQ 120
Query: 122 LISILSTPATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L+T L + Y VS + + + + G ++ E+
Sbjct: 121 RVGLLATSTCLGAGLYQSAFAPYGVSTLALEGSALARFMDLLYQIKAGD--TGPRVRAEM 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+E +V+V CT PL++ + + PV ++++D + R
Sbjct: 179 RTLALELVDSGAEVLVAGCTEVPLVLDA-QDV---PVPLVNSTDVLVERTLQY 227
>gi|114563068|ref|YP_750581.1| aspartate racemase [Shewanella frigidimarina NCIMB 400]
gi|114334361|gb|ABI71743.1| aspartate racemase [Shewanella frigidimarina NCIMB 400]
Length = 231
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 47/136 (34%), Gaps = 7/136 (5%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++ +I NT + D++++ S+ L A + + +L
Sbjct: 67 AAKAVEAGGADFLLICTNTMHKVA-DDIQAQI-SIPILHIADATAEVLLADGISKVGLLG 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIEGCF 184
T T+ + + I + LV S + + + + + ++ G
Sbjct: 125 TRFTMEQDFYKQRISDNYP-IEV-LVPSPHEQTLIHDVIYQELCLGTINPQSRQCYLGII 182
Query: 185 IEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 183 DKLYEQGAEAVILGCT 198
>gi|306479789|emb|CBV36033.1| glutamate racemase [Helicobacter pylori]
Length = 78
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 8/78 (10%)
Query: 196 VLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+L CTH+PLI P P + + D+I + + F
Sbjct: 1 ILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYTLKNNACAFPKVE 58
Query: 250 LFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 FHASGDVIWLEKQAKEWL 76
>gi|30020311|ref|NP_831942.1| aspartate racemase [Bacillus cereus ATCC 14579]
gi|29895862|gb|AAP09143.1| Aspartate racemase [Bacillus cereus ATCC 14579]
Length = 230
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 52/140 (37%), Gaps = 8/140 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L K +I NT ++ ++++ + FL A + +
Sbjct: 63 ILGNVAYSLQKGGADFIIICTNTMHKVV-EKIKEKI-DIPFLHIADATAKEIKRKDIQKV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180
+L T T+ + + + I + + + ++ + V E I ++ E K +
Sbjct: 121 GLLGTKYTMEQDFYKSRIEEHDIKVIVPSGTNREKVNEVIYTELCLGKIVVQSREYYKRV 180
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+++ + +L CT
Sbjct: 181 IEELVQEGAQGI---ILGCT 197
>gi|149193789|ref|ZP_01870887.1| aspartate racemase [Caminibacter mediatlanticus TB-2]
gi|149135742|gb|EDM24220.1| aspartate racemase [Caminibacter mediatlanticus TB-2]
Length = 226
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/207 (12%), Positives = 57/207 (27%), Gaps = 48/207 (23%)
Query: 23 IGG------LIVLQ----KMRFLMPEYH----FIYVADDVGFPYGNWEDHALKK------ 62
IGG L + ++ + H +Y D + K
Sbjct: 7 IGGMSWESSLTYYKIINEEINKKLGNLHSGKIILYSVD----------FEEIAKLQRENN 56
Query: 63 -----RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
++ + L+ +I NT + D R+ ++ + + +
Sbjct: 57 WEKSSEILANVAKNLENAGADFVLICTNTMHKVADDVKRA--INIPLIDIRDVVIEEIKK 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI----KE 173
+ +L T T+ + + + + +V + + +
Sbjct: 115 RNLKKVLLLGTKFTMEDKFYKKYLVKKGIDIIVPSLKERDFIHKVIFNELCLGVIKTTSK 174
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACT 200
+E K I D ++L CT
Sbjct: 175 EEFLKIINSY-------NVDGVILGCT 194
>gi|227111786|ref|ZP_03825442.1| aspartate racemase [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 232
Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 11/126 (8%)
Query: 85 NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144
NT ++ DEL+ ++ + + + + A +L T T+ +
Sbjct: 84 NTP-HIVFDELQKRA-TVPLVSIIESTRDDALRLGVTKAGLLGTRFTMEEDFFKKPFRE- 140
Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-----EKEGKRTDVIVLAC 199
S + + +A ++E ++++ IK E F+ K+ K D ++L C
Sbjct: 141 -SGITVITPDTATMA-LIDEKIT-TELEQGVIKPETRADFVNIVQRMKKEKGIDAVILGC 197
Query: 200 THYPLI 205
T PL+
Sbjct: 198 TELPLL 203
>gi|229144817|ref|ZP_04273214.1| hypothetical protein bcere0012_19770 [Bacillus cereus BDRD-ST24]
gi|228638539|gb|EEK94972.1| hypothetical protein bcere0012_19770 [Bacillus cereus BDRD-ST24]
Length = 230
Score = 49.2 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKEKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI---KKEIEGCFIEKE 188
+ + + + I + + V S I +V E + ++ + E
Sbjct: 129 MEQDFYKSRIEEH--DIKVI-VPSGINREKVNEVIYTELCLGKIVVQSREYYKRVIEELV 185
Query: 189 GKRTDVIVLACT 200
+ I+L CT
Sbjct: 186 QEGAQGIILGCT 197
>gi|253687565|ref|YP_003016755.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754143|gb|ACT12219.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 235
Score = 48.8 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 3/130 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VI NT + D R+ + L A + + +L T T
Sbjct: 73 LRQAGADAIVICTNTMHKVADDVERAC--QLPLLHIADATGASLKQHGLKKVGLLGTRYT 130
Query: 132 LRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + I + + + + +R+ + D ++ + E +
Sbjct: 131 MEQDFYRQRIQERFGVEVVVPDHEGKEIVNRIIYDELCLGNINDVSRQAYRDIIQQLEQQ 190
Query: 191 RTDVIVLACT 200
+ I+L CT
Sbjct: 191 GAEGIILGCT 200
>gi|288957076|ref|YP_003447417.1| aspartate racemase [Azospirillum sp. B510]
gi|288909384|dbj|BAI70873.1| aspartate racemase [Azospirillum sp. B510]
Length = 244
Score = 48.8 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 56/156 (35%), Gaps = 20/156 (12%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+W R + D L++ L V NT +++ + ++ F+
Sbjct: 66 GDWTGAE---RYLAGKVDALERAGADLVVCVSNTMHRVVEPIMAGR--AIPFIHIADPTG 120
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+A + +L T AT+R L+ + + + L+ + ++ I
Sbjct: 121 EAIVKAGLTRVGLLGTAATMRSEM---LVERFRDRFGVELL----VPDEADQAIVDRIIF 173
Query: 173 EDEIKKEIEG-----CFI---EKEGKRTDVIVLACT 200
++ +++++ + + ++L CT
Sbjct: 174 DELVRRDLRPDSKAEYLRIVGDLRRRGAGGVILGCT 209
>gi|255930405|ref|XP_002556762.1| Pc06g01570 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581375|emb|CAP79150.1| Pc06g01570 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 226
Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 52/151 (34%), Gaps = 9/151 (5%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K ++I+ NT D + + ++ L + + +L T T+
Sbjct: 69 AKAGAEFAIISANTPHVAFNDIVAQS--NIPVLSILDVAANHCKRQGYKNVGVLGTTWTV 126
Query: 133 RRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ I+ + + + E + + ++ R
Sbjct: 127 KNGLYNGPLQKRDMAAVYVSDTDQAIVMNAIVQELINGIFLETTTSELVR--VAKELATR 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
D I+L CT PL++ + V+ +D
Sbjct: 185 CDAIILGCTELPLVLTE-QNC---GVEVVDT 211
>gi|167647143|ref|YP_001684806.1| aspartate racemase [Caulobacter sp. K31]
gi|167349573|gb|ABZ72308.1| aspartate racemase [Caulobacter sp. K31]
Length = 220
Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 18/170 (10%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + IACNTA D++R++ + + + AA + +
Sbjct: 59 VLAQMAVGLRDAGAQVLAIACNTAHAYA-DQVRAS--GLPLVDLIETAGLAAKADGAQRV 115
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI----KKE 179
+L T L L S I V ++ +VE A +IK ++ ++
Sbjct: 116 GVLGTGGALA------LYRRTFSHLGIEAV-TLDDHEQVEFMALLYRIKHGDVGPASRET 168
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ GK V+V CT PL++ S V ++D ++++ARR
Sbjct: 169 MAALAHRLVGKGAQVVVAGCTEVPLVMS----ASDLTVPFIDATEALARR 214
>gi|295676959|ref|YP_003605483.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295436802|gb|ADG15972.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 231
Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ L ++A NT + + + ++ FL A + +L
Sbjct: 67 AARQLERGGADLVILATNTM-HRVYESIEQAI-TVPFLHIADPTGAALRAAGVERVGLLG 124
Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ +T YT L Y + R+ +D +K +
Sbjct: 125 TRYTMEQTFYTGRLRERYGLDTLVPDDDERTDVHRIIYDELCHGNVDDASRKVYQRVIEH 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAARGAQAVILGCT 198
>gi|282858060|ref|ZP_06267256.1| aspartate racemase [Pyramidobacter piscolens W5455]
gi|282584107|gb|EFB89479.1| aspartate racemase [Pyramidobacter piscolens W5455]
Length = 235
Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 44/157 (28%), Gaps = 19/157 (12%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G AL++ L L L + CNTA + D R+ + +
Sbjct: 62 GESPAAALRQGLDTLCGW-----GADLLAVPCNTA-HIFIDPFRAQLRAPLIHIVEATVA 115
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHS-----YVSQCHIHLVSSMILASRVEEYAC 167
A G I++T AT+ + + +++ +
Sbjct: 116 DAVKAAPDGC-WIIATGATMASGIYEKEAARRGYRFFAPSEEVRELAT----KAIVHVKA 170
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204
G + +EI ACT PL
Sbjct: 171 GELKAGGAVMEEIAARLWAVRRAPIVT---ACTELPL 204
>gi|162659852|gb|EDQ48142.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 194
Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 4/101 (3%)
Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR 161
+ FL + AA + +L T T+ + + + + + + R
Sbjct: 63 IPFLHIADPVADAARTRGYRKLGLLGTRFTMEQPFMRERLQQQGLEVLVPQEADRAEVHR 122
Query: 162 V--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ EE G ++E ++ + + G+ +VL CT
Sbjct: 123 IIYEELCTGRILEES--RRTYQRIMAQLAGQGAQAMVLGCT 161
>gi|15965834|ref|NP_386187.1| putative aspartate racemase protein [Sinorhizobium meliloti 1021]
gi|307309591|ref|ZP_07589244.1| aspartate racemase [Sinorhizobium meliloti BL225C]
gi|307321868|ref|ZP_07601253.1| aspartate racemase [Sinorhizobium meliloti AK83]
gi|15075103|emb|CAC46660.1| Putative aspartate racemase [Sinorhizobium meliloti 1021]
gi|306892479|gb|EFN23280.1| aspartate racemase [Sinorhizobium meliloti AK83]
gi|306899926|gb|EFN30548.1| aspartate racemase [Sinorhizobium meliloti BL225C]
Length = 234
Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 2/133 (1%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L +I NT + + + + + S +L+
Sbjct: 69 VARGLVAGGADCILICSNTM--HLIADAVHASVDVPLINIIDETALRLKAAGSRKPLLLA 126
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + + + + ++ + L V + + + G +
Sbjct: 127 TRYTMEQGFYAERMKTHDIDLMVPDADGRTLTHNVIFDELCAGQVLNASRSAVIGLIEKA 186
Query: 188 EGKRTDVIVLACT 200
+ + D ++L CT
Sbjct: 187 KAEGADAVILGCT 199
>gi|229147323|ref|ZP_04275673.1| amino-acid racemase [Bacillus cereus BDRD-ST24]
gi|228636155|gb|EEK92635.1| amino-acid racemase [Bacillus cereus BDRD-ST24]
Length = 225
Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 70/176 (39%), Gaps = 16/176 (9%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V Q+
Sbjct: 57 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQRSL-SIPILNIVDETLQSIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +++L+T AT++ + I I + + + + IK E E
Sbjct: 114 N-TKRVALLATEATVQAGIYQDGIAKRN----IEYIHYEKWQTMINQIITYIKSGEVENA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+++ + + D ++ACT + + +++D+S +A+ +
Sbjct: 169 RKLWSALVVQLKDEVDTAIIACT------DL--NVVAASENFVDSSQCLAKAVVRM 216
>gi|91792825|ref|YP_562476.1| aspartate racemase [Shewanella denitrificans OS217]
gi|91714827|gb|ABE54753.1| aspartate racemase [Shewanella denitrificans OS217]
Length = 230
Score = 48.8 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 19/167 (11%)
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYT 118
+ +R + +D+ P +I CN D ++ S+ Q
Sbjct: 62 ILQRELQYLNDL----CPSCILI-CNNTLHQAFDAIKDKLNLSVPVFHMADLTAQHVYQK 116
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+ + T T+ Y SN I ++ + + L R+ + I + +
Sbjct: 117 GHKKVLLTGTQYTMESGYYSNKIAAHGIEVIV-----PALEERIHIQSMQQSIAKGHATE 171
Query: 179 EIEGCFIEKEGK--RTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDN 222
+ F + D ++ ACT PL I QL + +D
Sbjct: 172 QFTAAFEKILANYLDCDAVITACTELPLVITPTITQL-----EIVDP 213
>gi|186470782|ref|YP_001862100.1| aspartate racemase [Burkholderia phymatum STM815]
gi|184197091|gb|ACC75054.1| aspartate racemase [Burkholderia phymatum STM815]
Length = 233
Score = 48.8 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 12/172 (6%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ D+L++ L I CN+A + S P + A A
Sbjct: 62 ALLAGIDMLNRNSVGLIAIPCNSAHHWYAQICAHSAAPVLNIAEICVAAVPPTA----KR 117
Query: 123 ISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++L+T L + + ++A ++ G D +E
Sbjct: 118 VAVLATGGALVSGFYQRALAERDIEPVTPDETVQPLVAVCIDAVKSG---DLDAAAMHLE 174
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + +LACT PL ++++ + +D+S +AR
Sbjct: 175 TALAMLVKQGVTMALLACTEIPLAA---QRIAAPALPLIDSSLELARATVKY 223
>gi|116696357|ref|YP_841933.1| aspartate racemase [Ralstonia eutropha H16]
gi|113530856|emb|CAJ97203.1| aspartate racemase [Ralstonia eutropha H16]
Length = 240
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 56/165 (33%), Gaps = 16/165 (9%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++L++ Q L VI CNT +L S + L + I AA +G ++IL+T
Sbjct: 75 ELLNRNQVGLVVIPCNT-SHHWYAQL-SAHSAAPILH-IARICVAALPADTGSVAILATR 131
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
L + + + + + D+ + +
Sbjct: 132 GALASGIYQAALDARGIAAVVPPEPVQLQVDACIRAVKAGAL--DQAGEALGSALARIAA 189
Query: 190 KRTDVIVLACTHYPLIVHVF----RQLSPWPVDWLDNSDSIARRA 230
++ CT R L+ P+ +D+++ +AR
Sbjct: 190 LGVGAAIMGCT-------EIPVAARGLAAPPLMLVDSTNELARAT 227
>gi|169827813|ref|YP_001697971.1| hypothetical protein Bsph_2278 [Lysinibacillus sphaericus C3-41]
gi|168992301|gb|ACA39841.1| Hypothetical ygeA protein [Lysinibacillus sphaericus C3-41]
Length = 233
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ VI NT ++ E+ ++ L A Q +++L T T
Sbjct: 72 LERAGADFIVICTNTMHKVV--EVMEEAITIPILHIADATAQQIKKAGLQKVALLGTMYT 129
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + + Y + S + +R+ EE G I K E
Sbjct: 130 MEQEFYRSRVEGYGIAVIVPERHSRMEVNRIIYEELCLGSIIPNS--KSYYIQVINELVE 187
Query: 190 KRTDVIVLACT 200
++L CT
Sbjct: 188 AGAQGVILGCT 198
>gi|194366566|ref|YP_002029176.1| aspartate racemase [Stenotrophomonas maltophilia R551-3]
gi|194349370|gb|ACF52493.1| aspartate racemase [Stenotrophomonas maltophilia R551-3]
Length = 230
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L L +I NT L D + + P + L QA + + +L
Sbjct: 67 AARRLQAGGADLLLICTNTMHKLA-DRIEAVCP-LPLLHIADPTAQAIVQSGMRRVGLLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + L + + + + + D ++
Sbjct: 125 TAFTMEQDFYRGRLQDRFGLEVLVPDADDRRSVHDIIYQELIAGVVSDRSRQVYVDVIAR 184
Query: 187 KEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 185 LVERGAEAIILGCT 198
>gi|321312993|ref|YP_004205280.1| aspartate racemase [Bacillus subtilis BSn5]
gi|320019267|gb|ADV94253.1| aspartate racemase [Bacillus subtilis BSn5]
Length = 208
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 63/189 (33%), Gaps = 14/189 (7%)
Query: 52 YGNWEDH--ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109
Y + +KK ++ L+K + CNTA + +E++
Sbjct: 30 YADRPIDHDEMKKAIIDGAVK-LEKTGVDFIALPCNTA-HIYYEEIQQALSVPMLHIVEE 87
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
IK+ + + +L T T++ ++ + + + +
Sbjct: 88 TIKEIPHPAKKAV--VLGTEPTIQSAIYQKVLKANGQEVIHKDHWQQAVNQLIAAIKQPN 145
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
++ + + E+ + D+I+ ACT ++ + P +D+S +A+
Sbjct: 146 HMQH---TQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEIP----IIDSSACLAKS 198
Query: 230 -ARCLLPRI 237
L
Sbjct: 199 TVSTYLAYQ 207
>gi|306480050|emb|CBV36284.1| glutamate racemase [Helicobacter pylori]
Length = 78
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 21/78 (26%), Gaps = 8/78 (10%)
Query: 196 VLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+L CTH+PLI + + D+I + F
Sbjct: 1 ILGCTHFPLIAQKIEGYFMDHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPKVE 58
Query: 250 LFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 FHASGDVVWLEKQAKEWL 76
>gi|212223817|ref|YP_002307053.1| aspartate racemase [Thermococcus onnurineus NA1]
gi|212008774|gb|ACJ16156.1| aspartate racemase [Thermococcus onnurineus NA1]
Length = 229
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 52/185 (28%), Gaps = 21/185 (11%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G L + L+ + ++ CNTA + ++ K
Sbjct: 58 GEDPRPELVESARK-----LESWGADFIIMPCNTA-HFFAESIQRKISIPLVSMVEETAK 111
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIK 170
+ + +L+T T++ + Q + + L E G
Sbjct: 112 R-IEEMGLKKVGLLATDGTIKGLVYHRALLDRGIQIAVPIKKDQELVMKGIYEGVKAGNL 170
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIAR 228
E+ + ++ I+ CT V L P V +D D IA
Sbjct: 171 ELGRELLLRVARRLEKRSEG----IIAGCT------EVSVALKPEDLSVPLIDPLDVIAE 220
Query: 229 RARCL 233
A L
Sbjct: 221 MAVRL 225
>gi|167637972|ref|ZP_02396250.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|177651115|ref|ZP_02933946.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
gi|254736866|ref|ZP_05194572.1| aspartate racemase family protein [Bacillus anthracis str. Western
North America USA6153]
gi|167513789|gb|EDR89157.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|172082941|gb|EDT68003.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
Length = 224
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 9/121 (7%)
Query: 82 IA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
IA CNTA L +EL+ + S+ L V +A T +++L T AT++ +
Sbjct: 78 IAMSCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPETA-KRVALLETEATVQAGIYQD 134
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
I I + + + IK E E +E+ + + D ++AC
Sbjct: 135 GIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEARELWSALVLQLKDEVDTAIIAC 190
Query: 200 T 200
T
Sbjct: 191 T 191
>gi|257077294|ref|ZP_05571655.1| aspartate racemase [Ferroplasma acidarmanus fer1]
Length = 230
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 24/154 (15%)
Query: 53 GNWED-HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI 111
G A+ K + D L++ I CNTA + E ++ + L V
Sbjct: 56 GTKSPVDAINKGI-----DFLERNGITTIAIPCNTA-HIWFSEFKA---GVNLLNMVDLT 106
Query: 112 KQAAAYTQSGLISILSTPATLRRT-YTSNL----IHSYVSQCHIHLVSSMILASRVEEYA 166
+A + L+T AT++ Y NL I + + + ++ ++ L E
Sbjct: 107 VKAILDSGYKHPGFLATTATIKSRLYIKNLEEAGISAIIPEQEDTVMQAVKLVKLGEI-- 164
Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
K ++ E E +D I++ACT
Sbjct: 165 -------SRAKATLKPVVKELEDNGSDSIIMACT 191
>gi|4001718|dbj|BAA35091.1| aspartate racemase [Thermococcus sp. KS-8]
Length = 232
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 57/192 (29%), Gaps = 35/192 (18%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA--------FTLIKDELRSTFPSMAF 104
G L L++ ++ CNTA ++I
Sbjct: 58 GPDPRPELITSARK-----LEECGADFIIMPCNTAHFFAGTIQSSVIY----------PL 102
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164
+ + + + +L+T T++ + + L +
Sbjct: 103 VSMIEETAKRIEEMGLRKVGLLATDGTIKGMVYHRALLKRGIHIAVPNKKDQGLVMKA-- 160
Query: 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLD 221
G+K E+ +E+ +K +R++ I+ CT + V +D
Sbjct: 161 IYEGVKAGNLELGRELLLKVAKKLERRSEGIIAGCT-------EVSVVLKPGDLTVPLID 213
Query: 222 NSDSIARRARCL 233
D IA RA L
Sbjct: 214 PMDVIAERAVKL 225
>gi|119468433|ref|ZP_01611524.1| hypothetical protein ATW7_10318 [Alteromonadales bacterium TW-7]
gi|119447941|gb|EAW29206.1| hypothetical protein ATW7_10318 [Alteromonadales bacterium TW-7]
Length = 231
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 3/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+L+ + ++ +I NT + D + S S+ L A + +
Sbjct: 61 AKLLTEAAKSVEAGGADFLLICTNTMHKVA-DHIASNI-SIPILHIADATADQLKHDKIT 118
Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L T T+ + + L + + I + + I DE + E
Sbjct: 119 RVGLLGTQFTMEQNFYKRRLTDRHNIEVLIPEPNERARVHDIIYNQLCQGIINDEARAEF 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
K IVL CT
Sbjct: 179 INIIERMFDKGAQAIVLGCT 198
>gi|154174088|ref|YP_001409162.1| aspartate racemase [Campylobacter curvus 525.92]
gi|112802179|gb|EAT99523.1| aspartate racemase [Campylobacter curvus 525.92]
Length = 230
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 12/157 (7%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ L K L+ + ++ A NT ++ DEL + P + + V A +
Sbjct: 54 ERKFDELVKYLLNGIDSLHAAGAQFGAISA-NTP-HIVFDELAARSP-IPLISIVEATLK 110
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
A + I +L T T++ ++ + I + + E +++
Sbjct: 111 QARREKLSKIGLLGTYTTMKESFFKT--PFLKNGIEIFT-PNGDEMKFIGEKIA-TELEL 166
Query: 174 DEIKKEIEGCFI-----EKEGKRTDVIVLACTHYPLI 205
+ + K+ + F+ ++ + +VL CT P I
Sbjct: 167 NIVNKQTQNKFLTIIENMRKIYGIESVVLGCTELPFI 203
>gi|30264822|ref|NP_847199.1| aspartate racemase family protein [Bacillus anthracis str. Ames]
gi|47530307|ref|YP_021656.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187641|ref|YP_030894.1| aspartate racemase family protein [Bacillus anthracis str. Sterne]
gi|65322123|ref|ZP_00395082.1| COG1794: Aspartate racemase [Bacillus anthracis str. A2012]
gi|165869772|ref|ZP_02214430.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167633792|ref|ZP_02392115.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|170685960|ref|ZP_02877183.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|170705467|ref|ZP_02895931.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|190568295|ref|ZP_03021203.1| aspartate racemase family protein [Bacillus anthracis
Tsiankovskii-I]
gi|227817547|ref|YP_002817556.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|229603579|ref|YP_002869030.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|254687563|ref|ZP_05151419.1| aspartate racemase family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254725128|ref|ZP_05186911.1| aspartate racemase family protein [Bacillus anthracis str. A1055]
gi|254741901|ref|ZP_05199588.1| aspartate racemase family protein [Bacillus anthracis str. Kruger
B]
gi|254754501|ref|ZP_05206536.1| aspartate racemase family protein [Bacillus anthracis str. Vollum]
gi|254757334|ref|ZP_05209361.1| aspartate racemase family protein [Bacillus anthracis str.
Australia 94]
gi|30259497|gb|AAP28685.1| aspartate racemase family protein [Bacillus anthracis str. Ames]
gi|47505455|gb|AAT34131.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181568|gb|AAT56944.1| aspartate racemase family protein [Bacillus anthracis str. Sterne]
gi|164714601|gb|EDR20120.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167530593|gb|EDR93295.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|170129592|gb|EDS98455.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|170670424|gb|EDT21164.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|190560551|gb|EDV14528.1| aspartate racemase family protein [Bacillus anthracis
Tsiankovskii-I]
gi|227002401|gb|ACP12144.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|229267987|gb|ACQ49624.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
Length = 224
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 61/154 (39%), Gaps = 18/154 (11%)
Query: 82 IA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
IA CNTA L +EL+ + S+ L V +A T +++L T AT++ +
Sbjct: 78 IAMSCNTA-HLYFEELQQSL-SIPILNIVDETLKAIPETA-KRVALLETEATVQAGIYQD 134
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
I I + + + IK E E +E+ + + D ++AC
Sbjct: 135 GIAKRN----IEYIHYEQWQESINQIITYIKSGEVEEARELWSALVLQLKDEVDTAIIAC 190
Query: 200 THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
T ++ D++D++ +A+ +
Sbjct: 191 TDLNVVASE---------DFVDSAQCLAKAVVRM 215
>gi|172063017|ref|YP_001810668.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171995534|gb|ACB66452.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 233
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 8/168 (4%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L++ + I CN+A LR + L V A A +++L+T
Sbjct: 69 LLNRCGVDVIAIPCNSA-HHWYAPLRE-CSAAPVLHIVDASVAAVPA-GVRRVAVLATGG 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL + + + + + V++ + K+ + + +
Sbjct: 126 TLVSGFYQAALRARGFEPVMPAVTAQRDIAACIAAVKAGKVDASV--RRLSRALATLARR 183
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
V V+ CT P+ R P +D++ +AR
Sbjct: 184 DVGVAVMGCTEIPIAARALRDA---PFALIDSTQELARATVAYAAERG 228
>gi|148974135|ref|ZP_01811668.1| aspartate racemase [Vibrionales bacterium SWAT-3]
gi|145965832|gb|EDK31080.1| aspartate racemase [Vibrionales bacterium SWAT-3]
Length = 231
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 45/131 (34%), Gaps = 5/131 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++K +I NT ++ E+ ++ L Q + +L T T
Sbjct: 71 VEKGGADFILICTNTMHKVV-PEIEEK-TTIPILHIADTTAQKLLDQGVKKVGLLGTAFT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + L + I S + + + C +IKE+ + +
Sbjct: 129 MEQDFYKGRLTEKFDIDVVIPDESDRKQVHNIIYQELCRGEIKEES-RTIYSQIIEKLSQ 187
Query: 190 KRTDVIVLACT 200
+ + IVL CT
Sbjct: 188 QGAEAIVLGCT 198
>gi|228939356|ref|ZP_04101947.1| hypothetical protein bthur0008_20160 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228972234|ref|ZP_04132848.1| hypothetical protein bthur0003_20100 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978849|ref|ZP_04139217.1| hypothetical protein bthur0002_20510 [Bacillus thuringiensis Bt407]
gi|228780871|gb|EEM29081.1| hypothetical protein bthur0002_20510 [Bacillus thuringiensis Bt407]
gi|228787484|gb|EEM35449.1| hypothetical protein bthur0003_20100 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228820316|gb|EEM66350.1| hypothetical protein bthur0008_20160 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326939928|gb|AEA15824.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
Length = 230
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 49/139 (35%), Gaps = 6/139 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L K +I NT ++ +++ + L A + +
Sbjct: 63 VLANAAYSLQKGGADFIIICTNTMHKVV-GKIKEKI-DIPVLHIADATAKEIKRKDIQKV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIE 181
+L T T+ + + + I + + + + ++V E G + + ++ +
Sbjct: 121 GLLGTKYTMEQDFYKSRIEEHDIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYK 178
Query: 182 GCFIEKEGKRTDVIVLACT 200
E K I+L CT
Sbjct: 179 RVIEELVQKGAQGIILGCT 197
>gi|50120467|ref|YP_049634.1| putative aspartate racemase [Pectobacterium atrosepticum SCRI1043]
gi|49610993|emb|CAG74438.1| putative aspartate racemase [Pectobacterium atrosepticum SCRI1043]
Length = 238
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 47/157 (29%), Gaps = 37/157 (23%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTA---------FTLIKDELRSTFPSMAFLGAVPAIKQA 114
+ L++ V+ CNTA + + A A
Sbjct: 64 TLLHAVQQLNRLSVSHIVVPCNTAHHWFDALSETSHA-----------PLVHIADATLHA 112
Query: 115 AAY---TQS--GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS------SMILASRVE 163
T+ I +++T TL + + +Q + V + +
Sbjct: 113 ITQPVETKKIPQKIGLIATHGTLNAGWYQ---QRFAAQLGVETVVPDEQEMTTLFVPGCY 169
Query: 164 EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
G + +++ +E+ +R +VLACT
Sbjct: 170 AVKRGELQHGGRLLEQLAARLVERGAER---LVLACT 203
>gi|257885954|ref|ZP_05665607.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|257821810|gb|EEV48940.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
Length = 213
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 12/165 (7%)
Query: 72 LDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + L ++ CN+ I D L + P A + I +L+
Sbjct: 59 LQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKII---TPFQVYADLAQKHERIGVLTANG 115
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
S L+ + + ++ V+++ VE I E +
Sbjct: 116 QGAAGIESVLVQHHST-IRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDSMSFFMKN 171
Query: 191 RTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + I++ CTH+P + + + ++ D++ + + +L
Sbjct: 172 QVEAILIGCTHFPYFLTEYQSR---TRIPCINPDDALIEKVKSIL 213
>gi|257897472|ref|ZP_05677125.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|257834037|gb|EEV60458.1| conserved hypothetical protein [Enterococcus faecium Com12]
Length = 213
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 12/165 (7%)
Query: 72 LDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + L ++ CN+ I D L + P A + I +L+
Sbjct: 59 LQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKII---TPFQVYADLAQKHERIGVLTANG 115
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
S L+ + + ++ V+++ VE I E +
Sbjct: 116 QGAAGIESVLVQHHST-IRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDSMSFFMKN 171
Query: 191 RTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + I++ CTH+P + + + ++ D++ + + +L
Sbjct: 172 QVEAILIGCTHFPYFLTEYQSR---TRIPCINPDDALIEKVKSIL 213
>gi|299770779|ref|YP_003732805.1| aspartate racemase [Acinetobacter sp. DR1]
gi|298700867|gb|ADI91432.1| aspartate racemase [Acinetobacter sp. DR1]
Length = 241
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 43/142 (30%), Gaps = 23/142 (16%)
Query: 70 DILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LIS 124
IL++ I CNTA +L+ P ++Q QSG +
Sbjct: 74 KILERSGVSKIAIPCNTAHFWHS-----DLQQHTPIEILNMVEITVQQILKNYQSGDKVG 128
Query: 125 ILSTPATLRRTYTSNLIHS------YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
IL+T L + + S I V K + +
Sbjct: 129 ILATKGALSTQLYQHELSKHDIPFVINSDEEIEQ----EFMPAVYAVKRNESAKAGIVFQ 184
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
E+ I + I+LACT
Sbjct: 185 ELSQRLI---DQGAGSIILACT 203
>gi|227550146|ref|ZP_03980195.1| glutamate racemase [Enterococcus faecium TX1330]
gi|227180713|gb|EEI61685.1| glutamate racemase [Enterococcus faecium TX1330]
Length = 219
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 12/165 (7%)
Query: 72 LDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + L ++ CN+ I D L + P A + I +L+
Sbjct: 65 LQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKII---TPFQVYADLAQKHERIGVLTANG 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
S L+ + + ++ V+++ VE I E +
Sbjct: 122 QGAAGIESVLVQHHST-IRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDSMSFFMKN 177
Query: 191 RTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + I++ CTH+P + + + ++ D++ + + +L
Sbjct: 178 QVEAILIGCTHFPYFLTEYQSR---TRIPCINPDDALIEKVKSIL 219
>gi|261492724|ref|ZP_05989272.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495661|ref|ZP_05992107.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308768|gb|EEY10025.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311577|gb|EEY12732.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 231
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 64/199 (32%), Gaps = 37/199 (18%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFS-------------DILDKYQPVLSVIACNTAFTLIK 92
D P + R ++ + + L+ +IACNTA
Sbjct: 33 DQAHIPLLISSIPDIPDRTRYILANGENPAPVMEKYIEGLESAGATCIIIACNTA-HYWF 91
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
+ L++ + L + + + +L+T ATL + +
Sbjct: 92 EHLKAK-SQVEMLSMIDCVVDEVLKCGKRRVGLLATDATLAVELYKKQL-----EAQGLT 145
Query: 153 VSSMILASRVEEYACGI-----KIKEDEIKKEIEGCFIEKEG---KRTDVIVLACTHYP- 203
E + +K E++K E +++ +VI+L CT P
Sbjct: 146 FICPT-----ENGQKAVMDSIYLLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPI 200
Query: 204 LIVHVFRQLSPWPVDWLDN 222
++ + P+ ++D+
Sbjct: 201 ILAQEIER---EPMRYVDS 216
>gi|322376070|ref|ZP_08050580.1| putative aspartate racemase [Streptococcus sp. C300]
gi|321279020|gb|EFX56063.1| putative aspartate racemase [Streptococcus sp. C300]
Length = 230
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 50/138 (36%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ + L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQEKI-TIPILHIAQATAQALLADGIQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + + +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGNIKESSKQTYLA 179
Query: 183 CFIEKEGKRTDVIVLACT 200
E + + ++L CT
Sbjct: 180 IIDELKKAGAEAVILGCT 197
>gi|293573127|ref|ZP_06684065.1| putative glutamate racemase [Enterococcus faecium E980]
gi|291606796|gb|EFF36180.1| putative glutamate racemase [Enterococcus faecium E980]
Length = 216
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 12/165 (7%)
Query: 72 LDKYQPVLSVIACNTAFTLI-KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + L ++ CN+ I D L + P A + I +L+
Sbjct: 62 LQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKII---TPFQVYADLAQKHERIGVLTANG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
S L+ + + ++ V+++ VE I E +
Sbjct: 119 QGAAGIESVLVQHHST-IRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDSMSFFMKN 174
Query: 191 RTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + I++ CTH+P + + + ++ D++ + + +L
Sbjct: 175 QVEAILIGCTHFPYFLTEYQSR---TRIPCINPDDALIEKVKSIL 216
>gi|311111893|ref|YP_003983115.1| aspartate racemase [Rothia dentocariosa ATCC 17931]
gi|310943387|gb|ADP39681.1| aspartate racemase [Rothia dentocariosa ATCC 17931]
Length = 234
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 4/130 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ L ++A NT + R+T ++ L V A A + +L T T
Sbjct: 71 LEGAGAQLLLVATNTMHKVAPAIERAT--TVPLLHVVDATATAIQRQGLQRVGLLGTTFT 128
Query: 132 LRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + + Q + + + E C ++ E E + ++ + +
Sbjct: 129 MSDGFYTERMAVQGIQTIVPTESEQTDINRIIFEQLCLGRV-EPEAVQYLQQVITGLKEQ 187
Query: 191 RTDVIVLACT 200
++L CT
Sbjct: 188 GAQGVILGCT 197
>gi|70730197|ref|YP_259936.1| aspartate racemase [Pseudomonas fluorescens Pf-5]
gi|68344496|gb|AAY92102.1| aspartate racemase [Pseudomonas fluorescens Pf-5]
Length = 230
Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 46/139 (33%), Gaps = 2/139 (1%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + L+ V+ NT + + F+ + QAA +
Sbjct: 61 AAILVEAARRLEAGGAECVVLCTNTMHKVAGQI--EAAIGVPFVHIADPVVQAAQAAGTL 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T+ + + + + + + R+ + + + ++ +
Sbjct: 119 SVGLLGTAFTMEQAFLKGRLEDQGLKVLVPDAAQRQAVHRIIYEELCVGVVSESSRRLYQ 178
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ + + I+L CT
Sbjct: 179 HVIDGLQARGAEAIILGCT 197
>gi|211639250|emb|CAR94649.1| hypothetical protein [Escherichia coli]
Length = 229
Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 27/180 (15%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VI CNTA EL+ + L V I +L+T AT
Sbjct: 61 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNAT 118
Query: 132 LRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
L I S + + G ++ E
Sbjct: 119 LYMGLYQKGIESLGFTCVSPDAD----GQKKVMESIYSLKAGNIAHAQKLMNEQAEILFS 174
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPV-----DWLDNSDSIARR-ARCLLPRINTH 240
+ +++VL CT + V ++D++ S+ R + R+ H
Sbjct: 175 R---GAEILVLGCT-------EIPDILAQAVKEQPSRYIDSAASLVRAGIKWYENRVGKH 224
>gi|254522508|ref|ZP_05134563.1| aspartate racemase [Stenotrophomonas sp. SKA14]
gi|219720099|gb|EED38624.1| aspartate racemase [Stenotrophomonas sp. SKA14]
Length = 230
Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 41/134 (30%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L L +I NT L D + + P + L A + + +L
Sbjct: 67 AARRLQAGGADLLLICTNTMHKL-TDRIEAACP-LPLLHIADPTANAIVQAGARRVGLLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + L + + + + + ++ ++
Sbjct: 125 TAFTMEQDFYRGRLQERFGLEVLVPDAEDRRSVHDIIYQELIAGVVSEQSRRVYAAVIAR 184
Query: 187 KEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 185 LIARGAEAIILGCT 198
>gi|262395398|ref|YP_003287251.1| aspartate racemase [Vibrio sp. Ex25]
gi|262338992|gb|ACY52786.1| aspartate racemase [Vibrio sp. Ex25]
Length = 231
Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 46/155 (29%), Gaps = 13/155 (8%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++K +I NT + ++ ++ ++ L A + + +L T T
Sbjct: 71 IEKGGADFILICTNTMHKVA-PQIEASI-NIPILHIADATAELLREKGVQKVGLLGTQFT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + L Y + + ++E + + + +
Sbjct: 129 MEQDFYKGRLSDLYGLDVITPAQDDRSIVHNIIYKELCQGEIKEESRTIYLQIIEKLKEQ 188
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222
+ ++L CT L V LD
Sbjct: 189 GAEAVILGCT-------EIALLVNQSHTDVTLLDT 216
>gi|313674468|ref|YP_004052464.1| aspartate racemase [Marivirga tractuosa DSM 4126]
gi|312941166|gb|ADR20356.1| aspartate racemase [Marivirga tractuosa DSM 4126]
Length = 229
Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 59/159 (37%), Gaps = 4/159 (2%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
++K+ + + + + + + A NT +I D ++ + L A +AA
Sbjct: 53 KEKIQKKYLEVCKKLQEAGADGIIICA-NTP-HMIYDYVQPKIDA-PILHIGIATGRAAQ 109
Query: 117 YTQSGLISILSTPATLRRTYTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +L T++ + S+++ + + I + + I ++
Sbjct: 110 DADLKTLGLLGNKPTMKGKFISSVLENDFGMKVIIPEGDDLDQSHHYVSKELTQGIFSEQ 169
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
K E + K D I+L CT P+++ + P
Sbjct: 170 AKAFYLDQIKELKRKGADGIILGCTELPILLKGIKADLP 208
>gi|118475485|ref|YP_892551.1| aspartate racemase [Campylobacter fetus subsp. fetus 82-40]
gi|118414711|gb|ABK83131.1| aspartate racemase [Campylobacter fetus subsp. fetus 82-40]
Length = 229
Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 65/203 (32%), Gaps = 37/203 (18%)
Query: 23 IGG------LIVLQ----KMRFLMPEYH----FIYVADDVGFPYGNWEDHALKKR----- 63
IGG L + ++R + H +Y + + H ++K
Sbjct: 7 IGGMSWESTLTYYKVLNEEIRDRLGGLHSAKCIVY----------SLDFHEIEKFQSQNE 56
Query: 64 ------LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
++ + L+K +I NT + D + ++ + F+ QA
Sbjct: 57 WQKSGKVLLDAALNLEKAGAECVMICTNTMHKVA-DMITASLK-IPFIHIADVTAQALKQ 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
S +L T T+ ++ + I + + S + V I + K
Sbjct: 115 NGSKKALLLGTKYTMTESFYKDKISKNSIEVVVPNKSDTDFINSVIFNELCIGNIKQSSK 174
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
E E + D ++L CT
Sbjct: 175 IEFIKIINESKKLGVDSVILGCT 197
>gi|170702582|ref|ZP_02893456.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170132516|gb|EDT00970.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 265
Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 49/167 (29%), Gaps = 14/167 (8%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ ++++ +I NT D L+ ++ + + A +
Sbjct: 62 ILAQAAEVIQHSGASKLLICSNTTSRTC-DRLQQRL-NLEVINIIDATAAHIHRCGYKRV 119
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR-----VEEYACGIKIKEDEIKK 178
+L T + R++ + + + + R + I +
Sbjct: 120 GLLGTRYVMERSFYRERLE--AAGIEVV---TPTPVDRRVIHNIIYQELCHGIFSPLSSE 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
+ + ++L CT PL + +D+ D+
Sbjct: 175 MFMSVVKQFARLGVEAVILGCTEIPLAFPALSSH--GGIAVVDSIDA 219
>gi|158421727|ref|YP_001523019.1| aspartate racemase [Azorhizobium caulinodans ORS 571]
gi|158328616|dbj|BAF86101.1| aspartate racemase [Azorhizobium caulinodans ORS 571]
Length = 232
Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 41/136 (30%), Gaps = 7/136 (5%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ + +I NT + + + + L + +L
Sbjct: 69 AARRLERGGADVLLICSNTMHRMAGEVAGAV--GVPLLHIADPTAARVKAAGLTRVGLLG 126
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCF 184
T T+ + + L + + + R+ EE G E ++
Sbjct: 127 TAFTMEQDFYKGRLAARHGLDVLVPEAEDRAVVHRIIYEELVQGRI--EAASREAYRAVI 184
Query: 185 IEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 185 ARLVARGAEAVILGCT 200
>gi|242280633|ref|YP_002992762.1| aspartate racemase [Desulfovibrio salexigens DSM 2638]
gi|242123527|gb|ACS81223.1| aspartate racemase [Desulfovibrio salexigens DSM 2638]
Length = 229
Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 15/159 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ +IA NT E+++ ++ L AI A + + +L T T
Sbjct: 71 VEAGGADALIIATNTM-HKAAPEVQAAV-NIPLLHMADAIAAGAEKCGASKLGLLGTAFT 128
Query: 132 LRRTYTSN-LIHSYVSQCHIHLVSSMILASR-VEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + S L Y + + + R + + C K+ ++ + ++ E
Sbjct: 129 MEQDFLSRPLKEKYGLEVIVPDCDGRSMVHRTIFDELCCGKLMDNTREGYVK-IIEEMAV 187
Query: 190 KRTDVIVLACTHYPLIVHVFRQLS-PWPVD--WLDNSDS 225
+ + IVL CT L P V +D ++
Sbjct: 188 QGAEAIVLGCT-------EIGLLVKPEDVSVPLIDTVEA 219
>gi|188991875|ref|YP_001903885.1| hypothetical protein xccb100_2480 [Xanthomonas campestris pv.
campestris str. B100]
gi|167733635|emb|CAP51840.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 233
Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 39/142 (27%), Gaps = 11/142 (7%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ M + L L V+ NT A + L L A A
Sbjct: 66 QAMATAARALQAGGADLIVLCTNTMHCVADAITAATL-------PLLHIADATADALVAA 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+ +L T T+ + + + + + + RV + + + +
Sbjct: 119 GILCVGLLGTRFTMEQPFYRERLEARGLDVLVPPAEARAQLHRVIYDELCQDVIKPKSRD 178
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 179 YFRQVMADLGQHGAQAIILGCT 200
>gi|149188687|ref|ZP_01866979.1| Aspartate racemase [Vibrio shilonii AK1]
gi|148837597|gb|EDL54542.1| Aspartate racemase [Vibrio shilonii AK1]
Length = 231
Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 42/140 (30%), Gaps = 3/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
R + + ++ +I NT + + + S+ L A + Y
Sbjct: 61 ARCLSESAKCIEAAGADCLLICTNTMHKVSSEI--ESVISIPLLHIADATAERLTYDGIT 118
Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L T T+ +++ L Y + + L V D ++
Sbjct: 119 KVGLLGTAFTMEQSFYKGRLEQKYDIEVVVPNQEQRALVHEVIYNELVKGEVRDISRQGY 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 179 LTIIEDLRSNGAQAIILGCT 198
>gi|333026103|ref|ZP_08454167.1| putative aspartate racemase [Streptomyces sp. Tu6071]
gi|332745955|gb|EGJ76396.1| putative aspartate racemase [Streptomyces sp. Tu6071]
Length = 232
Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 42/138 (30%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+++ + L L +I NT + + L A A
Sbjct: 62 QVLADAARSLRAAGADLLLICTNTMHKVAGQV--EAAVDVPLLHLADATASAVRTAGLRR 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + + + + L RV + I +E +
Sbjct: 120 VGLLGTAFTMEQDFYRDRVAGHGLEVLVPGADDRALVHRVIYEELCLGIIREESRAAYGE 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 180 VIGRLVAAGAEGVILGCT 197
>gi|306828496|ref|ZP_07461691.1| aspartate racemase [Streptococcus mitis ATCC 6249]
gi|304429295|gb|EFM32380.1| aspartate racemase [Streptococcus mitis ATCC 6249]
Length = 230
Score = 48.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 49/138 (35%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADVVQRLEQAGADFIVICTNTMHKVA-PQIQEKI-TIPILHIAQATAQALLADGIQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + + +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGNIKESSKQTYLA 179
Query: 183 CFIEKEGKRTDVIVLACT 200
E + + ++L CT
Sbjct: 180 IIDELKKAGAEAVILGCT 197
>gi|229491591|ref|ZP_04385412.1| aspartate racemase [Rhodococcus erythropolis SK121]
gi|229321272|gb|EEN87072.1| aspartate racemase [Rhodococcus erythropolis SK121]
Length = 265
Score = 48.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 44/171 (25%), Gaps = 14/171 (8%)
Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPATLRRTYTSNL 140
I CNTA + S + + + +L+T T+R
Sbjct: 101 IPCNTAHAF-LPAISSQLGHPVVHMIDEVARHIRTLSPAVTSVGLLATTGTVRTGLYQQW 159
Query: 141 IHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ Y + + L + ++ K + + V+V C
Sbjct: 160 LSEYSIDVLVPGPAIQDELVMPAIRAIKSGNVGDETTDKLVRAADL-LVESGAQVVVAGC 218
Query: 200 THYPLIVHVFRQLSPWPVD---WLDNSDSIARRARCLLPRINTHQTRVFDD 247
T P +D + +AR + H + V
Sbjct: 219 T-------EIPLGLPADATTCQIIDPATILARALLRRVADARRHPSMVVSG 262
>gi|296330339|ref|ZP_06872820.1| aspartate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305676056|ref|YP_003867728.1| aspartate racemase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296152607|gb|EFG93475.1| aspartate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305414300|gb|ADM39419.1| aspartate racemase [Bacillus subtilis subsp. spizizenii str. W23]
Length = 227
Score = 48.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 14/187 (7%)
Query: 52 YGNWEDH--ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109
Y + +K+ ++ L+K + CNTA + +E++
Sbjct: 49 YADRPIDHGEMKRAIIDGAVK-LEKTGVDFIALPCNTA-HVYYEEIQQVLSVPLLHIIEE 106
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
IK+ + G+ +L T +T++ + + + + + A
Sbjct: 107 TIKEIPHSAKKGV--VLGTDSTIQSAIYQKGLKANGQEVVHKDHWQHSVNQLI---AAIK 161
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+ + + + E+ + D+I+ ACT ++ + P +D+SD +A+
Sbjct: 162 QPNHTQHTQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEIP----IIDSSDCLAKS 217
Query: 230 -ARCLLP 235
L
Sbjct: 218 TVSTYLA 224
>gi|225574214|ref|ZP_03782824.1| hypothetical protein RUMHYD_02278 [Blautia hydrogenotrophica DSM
10507]
gi|225038582|gb|EEG48828.1| hypothetical protein RUMHYD_02278 [Blautia hydrogenotrophica DSM
10507]
Length = 237
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 42/134 (31%), Gaps = 13/134 (9%)
Query: 72 LDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + V++CNTA +++ + + L + + + +L+
Sbjct: 75 LQGMGADVLVMSCNTAHYFYDSIV------PYFDIPLLHMIRETAKHLKAQEIQKAGLLA 128
Query: 128 TPATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T TL + + + + + + D + E +
Sbjct: 129 TSGTLNCGVYREAMKREGIELLTPDGEDQEAVMGMIYQGVKAGRTDLD--TRRFERAMEK 186
Query: 187 KEGKRTDVIVLACT 200
+ +V++L CT
Sbjct: 187 LLERGAEVLILGCT 200
>gi|304436557|ref|ZP_07396527.1| aspartate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370427|gb|EFM24082.1| aspartate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 255
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/212 (13%), Positives = 66/212 (31%), Gaps = 41/212 (19%)
Query: 14 NSILIFDSGIGGLI---------VLQK-MRFLMPEYH----FIYVADDVGFPYGNWEDHA 59
+I + IGG+ V+ + ++ + H +Y D
Sbjct: 27 KTIGL----IGGMSWESTVTYYQVINETIKKQLGGLHSAKCILYSVD----------FDE 72
Query: 60 LKKR-----------LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108
++K ++ + L++ VI NT + + R + L
Sbjct: 73 IEKYQASGEWDKSADVLSEAAQALERAGADYIVICTNTMHKVAPEIGRRIH--IPILHIA 130
Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168
+ +L T T+++ + N++ + I + + + +R+ Y
Sbjct: 131 DMTAVQLKKHGIRKVGLLGTKYTMQQDFYKNILIEQGIEVVIPNDAGVDIVNRIIYYELC 190
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ ++ K E I+L CT
Sbjct: 191 LGKILEKSKAAYLDIIHELARNGAQGIILGCT 222
>gi|269122589|ref|YP_003310766.1| aspartate racemase [Sebaldella termitidis ATCC 33386]
gi|268616467|gb|ACZ10835.1| aspartate racemase [Sebaldella termitidis ATCC 33386]
Length = 231
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 14/178 (7%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
L + L+ + + L++ C NT + DE+ + L +A
Sbjct: 58 DELTEMLVDAGTRLKKAGADFLAI--CTNTMHKVA-DEVAEK-TGLKVLHIADVTAEAII 113
Query: 117 YTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
++ +L T T+ + L Y + I RV I + +
Sbjct: 114 QKNKNIVGLLGTDFTMSEDFYKKRLNDKYNIEVMIPEKMERERVHRVIYDELCCGIVKSQ 173
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARR 229
K E + K + ++L CT P+++ + L + D+ +D+I +
Sbjct: 174 SKAEFITIINNLKDKGAEGVILGCTEIPMLIEQ-KDL---DIRVFDSMKLHADAIVKE 227
>gi|228991217|ref|ZP_04151175.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
gi|228768441|gb|EEM17046.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
Length = 243
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+K VI NT + ++ S+ L A +
Sbjct: 66 VLGEAAYSLEKAGADFIVICTNTM-HKVISNIKDKV-SIPILHIADATAMEIKKQGIRSV 123
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + I + I + L +R+ + + +
Sbjct: 124 GLLGTKYTMEQDFYKSRIEEKGMRVMIPNETDRELVNRIIYNELCLGKVNQTSRDSYKEI 183
Query: 184 FIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 184 INRFVQNGVEGIILGCT 200
>gi|221315719|ref|ZP_03597524.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|143291|gb|AAA22641.1| amino acid racemase [Bacillus subtilis]
Length = 230
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 62/189 (32%), Gaps = 14/189 (7%)
Query: 52 YGNWEDH--ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109
Y + +KK ++ L+K + CNTA + +E++
Sbjct: 52 YADRPIDHDEMKKAIIDGAVK-LEKTGVDFIALPCNTA-HVYYEEIQQALSVPMLHIVEE 109
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
IK+ + + +L T T++ ++ + + +
Sbjct: 110 TIKEIPHPAKKAV--VLGTEPTIQSAIYQKVLKGNGQEVIHKDHWQQAVNQLIAAIKQPN 167
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
++ + + E+ + D+I+ ACT ++ + P +D+S +A+
Sbjct: 168 HMQH---TQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEIP----IIDSSACLAKS 220
Query: 230 -ARCLLPRI 237
L
Sbjct: 221 TVSTYLAYQ 229
>gi|299536870|ref|ZP_07050177.1| hypothetical protein BFZC1_12648 [Lysinibacillus fusiformis ZC1]
gi|298727694|gb|EFI68262.1| hypothetical protein BFZC1_12648 [Lysinibacillus fusiformis ZC1]
Length = 232
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 47/137 (34%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L++ L +I NT +I ++ ++ L A + I
Sbjct: 63 VLAQAAQALERAGAELIIICTNTMHKVI--DVIEPAITIPILHIADATAKQIKEAGLQKI 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++L T T+ + + + S+ + + + + +R+ + K
Sbjct: 121 ALLGTKYTMEQAFYKARVESFGIEVIVPDSNDRMEVNRIIYDELCLGTIVPASKTYYSQV 180
Query: 184 FIEKEGKRTDVIVLACT 200
E ++L CT
Sbjct: 181 IEELVHAGAQGVILGCT 197
>gi|117618212|ref|YP_858060.1| aspartate racemase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117559619|gb|ABK36567.1| aspartate racemase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 230
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 42/149 (28%), Gaps = 6/149 (4%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+W RL+ + + +I NT + + + L A
Sbjct: 55 GDWPA---TARLLAAEAQAIQAGGADFLLIGTNTMHKVAPEI--EAAIDIPLLHIADATA 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + +L T T+ + + L + + + + R+ +
Sbjct: 110 RQLQADGIQKVGLLGTRFTMEQDFYKGRLQDKFGLEVLVPGEAQRERVHRIIYDELCLGD 169
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
D + E ++L CT
Sbjct: 170 IRDASRAEYLAIISALADAGAQAVILGCT 198
>gi|16080496|ref|NP_391323.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221311392|ref|ZP_03593239.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221320634|ref|ZP_03601928.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. JH642]
gi|221324919|ref|ZP_03606213.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. SMY]
gi|226693554|sp|P32960|RACX_BACSU RecName: Full=Probable amino-acid racemase
gi|1945684|emb|CAB08017.1| amino acid racemase [Bacillus subtilis]
gi|2635956|emb|CAB15448.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168]
Length = 227
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 62/189 (32%), Gaps = 14/189 (7%)
Query: 52 YGNWEDH--ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109
Y + +KK ++ L+K + CNTA + +E++
Sbjct: 49 YADRPIDHDEMKKAIIDGAVK-LEKTGVDFIALPCNTA-HVYYEEIQQALSVPMLHIVEE 106
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
IK+ + + +L T T++ ++ + + +
Sbjct: 107 TIKEIPHPAKKAV--VLGTEPTIQSAIYQKVLKGNGQEVIHKDHWQQAVNQLIAAIKQPN 164
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
++ + + E+ + D+I+ ACT ++ + P +D+S +A+
Sbjct: 165 HMQH---TQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEIP----IIDSSACLAKS 217
Query: 230 -ARCLLPRI 237
L
Sbjct: 218 TVSTYLAYQ 226
>gi|327460111|gb|EGF06450.1| aspartate racemase [Streptococcus sanguinis SK1]
Length = 230
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ + L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADVAKRLEQAGADFIVICTNTMHKVA-PQIQEQI-AIPILHIAQATAQALLADGIQR 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + + +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLA 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 180 VIDDLKKAGAEAVILGCT 197
>gi|254166829|ref|ZP_04873683.1| aspartate racemase subfamily [Aciduliprofundum boonei T469]
gi|289596545|ref|YP_003483241.1| aspartate racemase [Aciduliprofundum boonei T469]
gi|197624439|gb|EDY37000.1| aspartate racemase subfamily [Aciduliprofundum boonei T469]
gi|289534332|gb|ADD08679.1| aspartate racemase [Aciduliprofundum boonei T469]
Length = 225
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 17/145 (11%), Positives = 52/145 (35%), Gaps = 13/145 (8%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
++ + L+ + ++ NT ++ D L + + + A+ + A
Sbjct: 57 REIYLLEIIKALEHAGAEIIALSANTP-HIVFDSLAKK-TNAKMISIIDALAEEAKNKGY 114
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDE 175
+ ++ T T+ + + + + + ++ E + G+ ++
Sbjct: 115 KKLLLMGTKTTMTSGFYKRKLEEHGFEVIVPE----EYVDEIDRIIFQELSHGVLKSKNR 170
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
+ +E +K+ + D +L CT
Sbjct: 171 LINIVESY--KKKYEDLDAAILGCT 193
>gi|329295701|ref|ZP_08253037.1| aspartate racemase [Plautia stali symbiont]
Length = 154
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 33/100 (33%), Gaps = 1/100 (1%)
Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILAS 160
+ L A Q + +L+T T+ + + L Y + + +
Sbjct: 20 IPLLHIADATAQRIRQAGVKRVGLLATAFTMEQEFYKGRLEQQYDIEVLVPDATGRKTVH 79
Query: 161 RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ + + +E + + + + + I+L CT
Sbjct: 80 DIIYQELCLGVIREESRAQYRDIIAQLVAQGAEAIILGCT 119
>gi|57168765|ref|ZP_00367896.1| aspartate racemase [Campylobacter coli RM2228]
gi|57019812|gb|EAL56495.1| aspartate racemase [Campylobacter coli RM2228]
Length = 221
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 55/149 (36%), Gaps = 7/149 (4%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G WE +++ + L+ +IA NT I D+++ + + +
Sbjct: 46 GEWEKA---AQILGECAKKLELGGADFILIATNTM-HKIFDQIQKNIK-IPLIHIAQSTA 100
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKI 171
+ I +L T T+ + N + + + L+ + C ++
Sbjct: 101 KILKQQNIHTIGLLGTQYTMMEDFYKNALKKENINTITPNQSDMQELSDIIFNELCKGQM 160
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
KE+ +K ++ + + + IVL CT
Sbjct: 161 KENSKEKYLK-IIQKLKDEGAQGIVLGCT 188
>gi|218234586|ref|YP_002366922.1| aspartate racemase family protein [Bacillus cereus B4264]
gi|229150447|ref|ZP_04278663.1| hypothetical protein bcere0011_19980 [Bacillus cereus m1550]
gi|218162543|gb|ACK62535.1| aspartate racemase family protein [Bacillus cereus B4264]
gi|228632940|gb|EEK89553.1| hypothetical protein bcere0011_19980 [Bacillus cereus m1550]
Length = 230
Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + + ++ + V E I ++ E K + +++
Sbjct: 129 MEQDFYKSRIEEHDIKIIVPSGTNREKVNEVIYTELCLGKIVVQSREYYKRVIEELVQEG 188
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 189 AQGI---ILGCT 197
>gi|260753107|ref|YP_003226000.1| aspartate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258552470|gb|ACV75416.1| aspartate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 229
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 5/130 (3%)
Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V+ C NT + + + ++ + V +A +L+T T+ + ++
Sbjct: 79 VLICTNTM--HLVADAVAEISAVPLINIVDETAKALKKDGRKRPLLLATRYTMEHGFYTD 136
Query: 140 LIHSYVSQCHIHLVSSMILASRV-EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+ + V + C ++KE + ++ + + D ++L
Sbjct: 137 RMKNQGLDVITPEDEDRGFVHDVIFDELCQGEVKESSRQGYLK-IIEKARAEGVDSVILG 195
Query: 199 CTHYPLIVHV 208
CT PL++
Sbjct: 196 CTEIPLLIKQ 205
>gi|170694718|ref|ZP_02885869.1| aspartate racemase [Burkholderia graminis C4D1M]
gi|170140349|gb|EDT08526.1| aspartate racemase [Burkholderia graminis C4D1M]
Length = 232
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ L ++A NT + + + + FL A + +L
Sbjct: 67 AARQLERGGAGLVMLATNTM-HRVYESI-ERAIHVPFLHIADPTGNALRAAGVERVGLLG 124
Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + YT L Y + + + R+ + E + +G
Sbjct: 125 TRYTMEQAFYTGRLRERYGLETLVPEEAQRADVHRIIYDELCHGNVKSESRAIYQGVIES 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAARGAQAVILGCT 198
>gi|51245772|ref|YP_065656.1| hypothetical protein DP1920 [Desulfotalea psychrophila LSv54]
gi|50876809|emb|CAG36649.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 240
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 64/182 (35%), Gaps = 10/182 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
GNW++ A+ + + +++ +I NT + E+ + S+ L A
Sbjct: 60 GNWQETAVI---LANAAQLVEAGGADFLLICTNTMHKVA-PEIEAEI-SIPLLHIADATA 114
Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ +L T T+ + L+ + + + + + I
Sbjct: 115 NKLLADGIKKVGLLGTRFTMEEDFYKSRLVDKFGIEVVVPDTDDRTIVHNIIYDELCRGI 174
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ +++ + + ++L CT I + +Q+ PV D ++ A +A
Sbjct: 175 INPQSREQYISIVSGLHEQGAEAVILGCT---EIALLIQQV-HTPVPLYDTTEIHAAQAV 230
Query: 232 CL 233
L
Sbjct: 231 QL 232
>gi|56551267|ref|YP_162106.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
gi|241760925|ref|ZP_04759014.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|5880350|gb|AAD54635.1|AF081588_2 aspartate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|11095428|gb|AAG29868.1|AF313764_11 aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
gi|56542841|gb|AAV88995.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
gi|241374544|gb|EER64005.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 229
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 5/130 (3%)
Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V+ C NT + + + ++ + V +A +L+T T+ + ++
Sbjct: 79 VLICTNTM--HLVADAVAEISAVPLINIVDETAKALKKDGRKRPLLLATRYTMEHGFYTD 136
Query: 140 LIHSYVSQCHIHLVSSMILASRV-EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+ + V + C ++KE + ++ + + D ++L
Sbjct: 137 RMKNQGLDVITPEDEDRGFVHDVIFDELCQGEVKESSRQGYLK-IIEKARAEGVDSVILG 195
Query: 199 CTHYPLIVHV 208
CT PL++
Sbjct: 196 CTEIPLLIKQ 205
>gi|323350873|ref|ZP_08086531.1| aspartate racemase [Streptococcus sanguinis VMC66]
gi|322122855|gb|EFX94561.1| aspartate racemase [Streptococcus sanguinis VMC66]
Length = 230
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 50/138 (36%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ + L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQEQI-TIPILHIAQATAQALLADGIQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + + +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGNIKESSKQAYLT 179
Query: 183 CFIEKEGKRTDVIVLACT 200
E + + ++L CT
Sbjct: 180 IIDELKKAGAEAVILGCT 197
>gi|322418614|ref|YP_004197837.1| aspartate racemase [Geobacter sp. M18]
gi|320125001|gb|ADW12561.1| aspartate racemase [Geobacter sp. M18]
Length = 235
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 17/153 (11%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
L+ L K ++I NT + +E+++ P + + V A A
Sbjct: 61 YLLVAKIKALQKAGADFAIITANTP-HAVFNEVQAKSP-IPLISIVLATCDKAKELGVKK 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSM--------ILASRVEEYACGIKIKED 174
+ +L T T+ + + + + +V L + +E IK+D
Sbjct: 119 VGLLGTMFTMEENFFA---PPFAAAGISVVVPCASEQQYIHDKLMTEIELGI----IKDD 171
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
K I+ + ++ D I+L CT PLI+
Sbjct: 172 TRKGLIDIIERLVQQEQVDAIILGCTELPLILK 204
>gi|209543142|ref|YP_002275371.1| aspartate racemase [Gluconacetobacter diazotrophicus PAl 5]
gi|209530819|gb|ACI50756.1| aspartate racemase [Gluconacetobacter diazotrophicus PAl 5]
Length = 230
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 44/132 (33%), Gaps = 7/132 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +I NT E + L A +A +L+T T
Sbjct: 71 LKRSGAEALLICSNTM--HCLHEAIEQAAEIPALHIADATGEALQRAGCKHPVLLATRFT 128
Query: 132 LRRT-YTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ R YT L + I + I R+ EE GI DE ++ +
Sbjct: 129 MEREFYTKRLRDLFGITARIPDGDARIGIHRIIYEELCRGII--RDESREHYRNAVRRMQ 186
Query: 189 GKRTDVIVLACT 200
+ D ++L CT
Sbjct: 187 TEGADSVILGCT 198
>gi|56552054|ref|YP_162893.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543628|gb|AAV89782.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 232
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 58/155 (37%), Gaps = 8/155 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIA--CNTAFTLIKDELRSTFPSMAFLGAVPAI 111
+ + L LM ++++ VIA NT ++ D+L+ + + V A
Sbjct: 54 DKDYTKLTTYLMHGVNNLIAAGAD---VIALTGNTP-HIVFDDLQKQ-SDVPLISIVEAT 108
Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ +L T T+ + LI + +S +A++++
Sbjct: 109 CDEVKRQNITKVGLLGTRFTMEADFFKKPLIANGMSVITPQPKEIDYIANKIDSELEKGI 168
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
++ + + I ++ + I+L CT PL+
Sbjct: 169 FSQNTLSEFISIISRMRDSDGIEAIILGCTELPLL 203
>gi|227329729|ref|ZP_03833753.1| putative aspartate/glutamate racemase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 236
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 9/159 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VI NT + D R+ + L A + + +L T T
Sbjct: 73 LRQAGAEAIVICTNTMHKVADDVERAC--QLPLLHIADATGTSLKQHGLKKVGLLGTRYT 130
Query: 132 LRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + I + + + +R+ + D ++ + E +
Sbjct: 131 MEQDFYRQRIQERFGVEVMVPDHEGKEAVNRIIYDELCLGNINDASRQIYRDIIQQLEQQ 190
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS--DSIA 227
+ I+L CT PL++ + V D S +IA
Sbjct: 191 GAEGIILGCTEIPLLISA-QDA---KVPLFDTSRLHAIA 225
>gi|282852139|ref|ZP_06261496.1| conserved domain protein [Lactobacillus gasseri 224-1]
gi|282556703|gb|EFB62308.1| conserved domain protein [Lactobacillus gasseri 224-1]
Length = 38
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 8/29 (27%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQK 31
+DN P I + DSG+GGL VL+K
Sbjct: 18 MDNRP--------IGVLDSGLGGLTVLKK 38
>gi|332364902|gb|EGJ42670.1| aspartate racemase [Streptococcus sanguinis SK355]
Length = 230
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 47/133 (35%), Gaps = 2/133 (1%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ VI NT + +++ ++ L A QA + +L
Sbjct: 67 IAQRLEQAGADFIVICTNTMHKIA-PQIQEKI-TIPILHIAQATAQALLADGIQKVGLLG 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + + + + I + + +R+ + ++ K+ +
Sbjct: 125 TKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKENSKQTYLAVIDDL 184
Query: 188 EGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 185 KKAGAEAVILGCT 197
>gi|227513566|ref|ZP_03943615.1| aspartate racemase [Lactobacillus buchneri ATCC 11577]
gi|227083439|gb|EEI18751.1| aspartate racemase [Lactobacillus buchneri ATCC 11577]
Length = 242
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 7/130 (5%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS-GLISILSTPAT 131
+ P VI CNTA D+L++ S+ L +K+ S + +++T T
Sbjct: 74 QLDPDFFVIPCNTA-HYSFDDLQA-LTSVPILHMPRETVKEIKHDVPSAKRVGLIATRGT 131
Query: 132 LRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L I ++ + + + ++ +I + K
Sbjct: 132 LHDGIYDQEIRHAGYDLVKPDEKTANQTMELIYDDIKEKNQVDGDLYHQILSTMVNK--F 189
Query: 191 RTDVIVLACT 200
DV++L CT
Sbjct: 190 SCDVVILGCT 199
>gi|305432494|ref|ZP_07401656.1| aspartate racemase [Campylobacter coli JV20]
gi|169640255|gb|ACA61178.1| aspartate racemase [Campylobacter coli]
gi|304444533|gb|EFM37184.1| aspartate racemase [Campylobacter coli JV20]
Length = 230
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 55/149 (36%), Gaps = 7/149 (4%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G WE +++ + L+ +IA NT I D+++ + + +
Sbjct: 55 GEWEKA---AQILGECAKKLELGGADFILIATNTM-HKIFDQIQKNIK-IPLIHIAQSTA 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKI 171
+ I +L T T+ + N + + + L+ + C ++
Sbjct: 110 KILKQQNIHTIGLLGTQYTMMEDFYKNALKKENINTITPNQSDMQELSDIIFNELCKGQM 169
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
KE+ +K ++ + + + IVL CT
Sbjct: 170 KENSKEKYLK-IIQKLKDEGAQGIVLGCT 197
>gi|227510557|ref|ZP_03940606.1| aspartate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190209|gb|EEI70276.1| aspartate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 242
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 7/130 (5%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS-GLISILSTPAT 131
+ P VI CNTA D+L++ S+ L +K S + +++T T
Sbjct: 74 QLDPDFFVIPCNTA-HYSFDDLQA-LTSVPILHMPRETVKDIKHDVPSAKRVGLIATRGT 131
Query: 132 LRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L I ++ + + + ++ +I + K
Sbjct: 132 LHDGIYDREIRHAGYDLVKPDEKTANQTMELIYDDIKEKNQVDGDLYHQILSTMVNK--F 189
Query: 191 RTDVIVLACT 200
DV++L CT
Sbjct: 190 SCDVVILGCT 199
>gi|226308962|ref|YP_002768922.1| aspartate racemase [Rhodococcus erythropolis PR4]
gi|226188079|dbj|BAH36183.1| probable aspartate racemase [Rhodococcus erythropolis PR4]
Length = 243
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 43/155 (27%), Gaps = 16/155 (10%)
Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPATLRRTYTSN 139
I CNTA + S + + + + + + +L+T T+R
Sbjct: 82 IPCNTAHAF-LPAISSQL-GLPVVHMIDEVARHIRTLSPAVTSVGLLATTGTVRTGLYQQ 139
Query: 140 LIHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+ Y + + L + ++ K + + V+V
Sbjct: 140 WLSEYSIDVLVPGPAIQDELVMPAIRAIKSGNVGDETTDKLVRAADL-LVESGAQVVVAG 198
Query: 199 CTHYPLIVHVFRQLSPWPVD---WLDNSDSIARRA 230
CT P +D + +AR
Sbjct: 199 CT-------EIPLGLPADATTCQIIDPATILARAL 226
>gi|327468006|gb|EGF13496.1| aspartate racemase [Streptococcus sanguinis SK330]
Length = 230
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ + L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADVAKRLEQAGADFIVICTNTMHKVA-PQIQEQI-AIPILHIAQATAQALLADGIQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + + +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLA 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 180 VIDDLKKAGAEAVILGCT 197
>gi|227114857|ref|ZP_03828513.1| putative aspartate racemase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 238
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 15/142 (10%)
Query: 68 FSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQS-G 121
L++ V+ CNTA L ++ S P + A AIK A ++
Sbjct: 68 AVRQLNRLSVSHIVVPCNTAHHWFDALAEE---SHAPLVHIADATLYAIKPPAEAKKAPQ 124
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKIKEDEIKK 178
I +++T TL + + + + + + G +
Sbjct: 125 KIGLIATHGTLNAGWYQQRFAAQLGAETVVPDEQEMTTLFVPGCYAVKRGELQHGG---R 181
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
++ + + + +VLACT
Sbjct: 182 LLDQLAAQLVARGAERLVLACT 203
>gi|154488878|ref|ZP_02029727.1| hypothetical protein BIFADO_02186 [Bifidobacterium adolescentis
L2-32]
gi|154083015|gb|EDN82060.1| hypothetical protein BIFADO_02186 [Bifidobacterium adolescentis
L2-32]
Length = 230
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSG--LISILST 128
V+ CNTA D+ ++ ++ L GAV + A Y ++ + L T
Sbjct: 65 MGASFIVLTCNTA-HYFYDDFQA-LTTVPILHMPRGAV--ARMAQRYPKNRFPRVGFLGT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV-----EEYACGIKIKEDEIKKEIEGC 183
+ + + + + L +R+ ++ ++ + + +
Sbjct: 121 VGSRKSGVYKRAVEE-AGYTFVE--PTDELQARITSLIYDDVKGSGELNLERYESVLRDM 177
Query: 184 FIEKEGKRTDVIVLACT 200
D ++L CT
Sbjct: 178 LDPAGPCACDTLILGCT 194
>gi|303326669|ref|ZP_07357111.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3]
gi|302862657|gb|EFL85589.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3]
Length = 237
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 47/152 (30%), Gaps = 20/152 (13%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + + + ++ + CNTA TL M F+ V +
Sbjct: 64 IEAYLEVIQRLRSAGATKIA-MCCNTAHWGITTL------EKKSGMPFINIVHEVIMQVK 116
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T I +L++ L+ ++ + S+ L V C K K +
Sbjct: 117 GTGKKNIGLLASDGCLKGRVYEPYFEEFLPYATLIY-PSLHLQREVTRGICNTKNKSRLL 175
Query: 177 --------KKEIEGCFIEKEGKRTDVIVLACT 200
K E G D++++ CT
Sbjct: 176 PDGHENRPKTIFTRVADEMFGAGADLLIIGCT 207
>gi|229158366|ref|ZP_04286431.1| amino-acid racemase [Bacillus cereus ATCC 4342]
gi|228625113|gb|EEK81875.1| amino-acid racemase [Bacillus cereus ATCC 4342]
Length = 224
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT
Sbjct: 70 LESTGVEFLAMPCNTA-HLYFEELQRSL-SVPILNIVDETLQAIPEN-TKRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I I + + + IK + E E+ + +
Sbjct: 127 VQAGIYQDGIIKRN----IEYIHHEKWQESINQIISCIKGGKIEKAHELWNALVLQLRDE 182
Query: 192 TDVIVLACT 200
D ++ACT
Sbjct: 183 VDTAIIACT 191
>gi|227524709|ref|ZP_03954758.1| aspartate racemase [Lactobacillus hilgardii ATCC 8290]
gi|227088193|gb|EEI23505.1| aspartate racemase [Lactobacillus hilgardii ATCC 8290]
Length = 242
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 7/130 (5%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQS-GLISILSTPAT 131
+ P VI CNTA D+L++ S+ L +K+ S + +++T T
Sbjct: 74 QLDPDFFVIPCNTA-HYSFDDLQA-LTSVPILHMPRETVKEIKHDVPSAKRVGLIATRGT 131
Query: 132 LRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L I ++ + + + ++ +I + K
Sbjct: 132 LHDGIYDQEIRHAGYDLVKPDEKTANQTMELIYDDIKEKNQVDGDLYHQILSTMVNK--F 189
Query: 191 RTDVIVLACT 200
DV++L CT
Sbjct: 190 SCDVVILGCT 199
>gi|296158356|ref|ZP_06841187.1| aspartate racemase [Burkholderia sp. Ch1-1]
gi|295891300|gb|EFG71087.1| aspartate racemase [Burkholderia sp. Ch1-1]
Length = 232
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ L ++A NT + + + + + FL A + +L
Sbjct: 67 AARRLEQGGADLVMLATNTM-HRVYESIEAAI-DVPFLHIADPTGSALRAAGIERVGLLG 124
Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ +T YT L Y + + + R+ D + +
Sbjct: 125 TRYTMEQTFYTGRLHERYGLETLVPDQAERADVHRIIYDELCHGKVNDASRAVYQRVIEA 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAARGAQAVILGCT 198
>gi|317492681|ref|ZP_07951108.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919431|gb|EFV40763.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 245
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 60/188 (31%), Gaps = 32/188 (17%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA---------FTLIKDELRSTFPSMA 103
G L++ L +L+ VI CNTA +
Sbjct: 57 GPSPYDYLERYL-----HMLETAGAECIVIPCNTAHYWFDRLQHSAHAEM---------- 101
Query: 104 FLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE 163
+ + A A S + +L+T ATL H Q V S V
Sbjct: 102 -INILDAT-LAELPHASQTVGLLATDATLATGLYQ---HKLDQQGRTLCVPEGDGQSAVM 156
Query: 164 EYACGIKIKEDEI-KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+ K + + + + + D+I++ CT PLI+ ++D+
Sbjct: 157 QAIYAYKAGDIALSQSLLFPQVEALMTRGADIIIMGCTEIPLIIGAEEDRFNCG--FIDS 214
Query: 223 SDSIARRA 230
+ ++ R A
Sbjct: 215 TAALVRAA 222
>gi|260752413|ref|YP_003225306.1| aspartate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258551776|gb|ACV74722.1| aspartate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 232
Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 58/155 (37%), Gaps = 8/155 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIA--CNTAFTLIKDELRSTFPSMAFLGAVPAI 111
+ + L LM ++++ VIA NT ++ D+L+ + + V A
Sbjct: 54 DKDYTKLTTYLMHGVNNLIAAGAD---VIALTGNTP-HIVFDDLQKQ-SDVPLISIVEAT 108
Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ +L T T+ + LI + ++ +A++++
Sbjct: 109 CDEVKRQNITKVGLLGTRFTMEADFFKKPLIANGMNVITPQPKEIDYIANKIDSELEKGI 168
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
++ + + I ++ + I+L CT PL+
Sbjct: 169 FSQNTLSEFISIISRMRDSDGIEAIILGCTELPLL 203
>gi|313893945|ref|ZP_07827511.1| aspartate racemase [Veillonella sp. oral taxon 158 str. F0412]
gi|313441509|gb|EFR59935.1| aspartate racemase [Veillonella sp. oral taxon 158 str. F0412]
Length = 222
Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 9/143 (6%)
Query: 63 RLMFLFSDI---LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
R + SD L+K VI NT + + + L A A +
Sbjct: 50 RSAEILSDAAQSLEKAGADYIVICTNTMHKVADEI--ERHIHIPLLHI--AEMTAVELEK 105
Query: 120 SG--LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
SG + +L T T+++ + ++ + I + L + + + + +E K
Sbjct: 106 SGITKVGLLGTKYTMQQDFYKCILENRGIHVVIPNEDQVELVNDIIYNELCLGVISNESK 165
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
++ + ++L CT
Sbjct: 166 QQYLDIIDDLVKSGVQGVILGCT 188
>gi|328552173|gb|AEB22665.1| aspartate racemase [Bacillus amyloliquefaciens TA208]
Length = 226
Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 11/131 (8%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K I CNTA + + L+ IK+ ++ ++L+T T
Sbjct: 70 LEKTGVDFIAIPCNTA-HIYFNSLKKLISVPLLNMVDETIKKIPKGSKKA--ALLATSPT 126
Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
++ + + + +E+ G + + E+ EK
Sbjct: 127 VQSGIFQEALIRENYDFLHQDSWQTCVD--QIIEKIKQGQINESITLFDELHRELAEK-- 182
Query: 190 KRTDVIVLACT 200
D ++ACT
Sbjct: 183 --VDTAIIACT 191
>gi|21231234|ref|NP_637151.1| putative resistance protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768759|ref|YP_243521.1| putative resistance protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|21112881|gb|AAM41075.1| putative resistance protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574091|gb|AAY49501.1| putative resistance protein [Xanthomonas campestris pv. campestris
str. 8004]
Length = 234
Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 41/138 (29%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ M + L V+ NT + D + + P + L A A
Sbjct: 66 QAMATAARALQAGGADFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGILR 123
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + + + RV + + + +
Sbjct: 124 VGLLGTRFTMEQPFYRERLEARGLDVLVPPAEARAQLHRVIYDELCQGVIKPKSRDYFRQ 183
Query: 183 CFIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 184 VMADLGQHGAQAIILGCT 201
>gi|261886484|ref|ZP_06010523.1| aspartate racemase [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 232
Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 37/203 (18%)
Query: 23 IGG------LIVLQ----KMRFLMPEYH----FIYVADDVGFPYGNWEDHALKKR----- 63
IGG L + ++R + H +Y + + H ++K
Sbjct: 10 IGGMSWESTLTYYKVLNEEIRDRLGGLHSAKCIVY----------SLDFHEIEKFQSQNE 59
Query: 64 ------LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
++ + L+K +I NT + D + ++ + F+ QA
Sbjct: 60 WQKSGKVLLDAALNLEKAGAECVMICTNTMHKVA-DMITASLK-IPFIHIADVTAQALKQ 117
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
S +L T T+ ++ + I + + + S + V I + K
Sbjct: 118 NGSKKALLLGTKYTMTESFYKDKISNNSIEVVVPNKSDTDFINSVIFNELCIGNIKQSSK 177
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
E E + D ++L CT
Sbjct: 178 IEFIKIINESKKLGVDSVILGCT 200
>gi|325695261|gb|EGD37161.1| aspartate racemase [Streptococcus sanguinis SK150]
Length = 230
Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ + L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQEKI-TIPILHIAQATAQALLADGIQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + + +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLT 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 180 IIDDLKKAGAEAVILGCT 197
>gi|222149060|ref|YP_002550017.1| aspartate racemase [Agrobacterium vitis S4]
gi|221736045|gb|ACM37008.1| aspartate racemase [Agrobacterium vitis S4]
Length = 237
Score = 47.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 11/125 (8%)
Query: 81 VIAC-NT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ C NT A + S+ + V A QA +L+T T+
Sbjct: 79 VLICTNTMHLIADAVAARV------SVPLIHIVDATAQAIKDAGFKRPLLLATRYTMEHG 132
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ ++ + + + + V E + + + + D +
Sbjct: 133 FYTDRMRALGLLPMVPGAEDRGIVHDVIFDELCAGRVEAQSRAAYLAIIEKAKADGADCV 192
Query: 196 VLACT 200
+L CT
Sbjct: 193 ILGCT 197
>gi|253701650|ref|YP_003022839.1| aspartate racemase [Geobacter sp. M21]
gi|251776500|gb|ACT19081.1| aspartate racemase [Geobacter sp. M21]
Length = 232
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 56/154 (36%), Gaps = 13/154 (8%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
L+ L K + I+ NT ++ DE+++ P + + V A + A
Sbjct: 61 YLLTAKVKALQKAGAEFAFISANTP-HVVFDEVQAKSP-LPLVSIVTATLEKAKGLGVTR 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSM-----ILASRVEEYACGIKIKEDEIK 177
+ +L T T+ + + + + ++ L + +E + ++ +
Sbjct: 119 VGLLGTKFTMEENFFAPPFSAAGISVVVPPLADRQYIQEKLMTEIELGVFKDETRDGLLA 178
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYP--LIVHVF 209
KE + D ++L CT P L+ F
Sbjct: 179 VIGR----MKEQEHIDAVILGCTELPLILLKDEF 208
>gi|332365373|gb|EGJ43136.1| aspartate racemase [Streptococcus sanguinis SK1059]
Length = 230
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ + L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADIAQRLEQAGADFIVICTNTMHKVA-PQIQEKI-TIPILHIAQATAQALLADGIQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + + +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESELEVLIPDQAGITEVNRIIYDELCLGNIKESSKQTYLA 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 180 VIDDLKKAGAEAVILGCT 197
>gi|126650720|ref|ZP_01722936.1| aspartate racemase [Bacillus sp. B14905]
gi|126592385|gb|EAZ86403.1| aspartate racemase [Bacillus sp. B14905]
Length = 232
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 6/140 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
++ + L++ VI NT ++ + ++ L A
Sbjct: 62 FVLAQAAQSLEQAGADFIVICTNTMHKVV--AVIEEAITIPILHIADATANQIKEAGLQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEI 180
I++L T T+ + + + + Y + + S + +R+ EE G + K
Sbjct: 120 IALLGTMYTMEQEFYKSRVEGYGIEVIVPDYHSRMEVNRIIYEELCLGSIVPNS--KSYY 177
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 178 IQVINDLVQAGAQGVILGCT 197
>gi|19910916|dbj|BAB87709.1| glutamate racemase [Helicobacter pylori]
Length = 78
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI + + D+I + F
Sbjct: 3 GCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFPKVEFH 60
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 61 ASGDVVWLEKQAKEWL 76
>gi|332158134|ref|YP_004423413.1| hydantoin racemase [Pyrococcus sp. NA2]
gi|331033597|gb|AEC51409.1| hydantoin racemase [Pyrococcus sp. NA2]
Length = 226
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 22/131 (16%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+K +I+C A +E R S+ +GA A+ A Q + +L T
Sbjct: 68 FEKRGVDAIIISC--AADPAVEEARREV-SIPVVGAGSAVASLALA-QGRKVGVL--NLT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK--EIEGCFIEKEG 189
T +I + I EE+ G+K D ++K EI +
Sbjct: 122 ---EKTPKVIKEVLGDHLI-----------AEEHPEGVKNTLDLMEKKTEIVEAARRLKE 167
Query: 190 KRTDVIVLACT 200
+ +VIVL CT
Sbjct: 168 RGVEVIVLGCT 178
>gi|27383265|ref|NP_774794.1| aspartate racemase [Bradyrhizobium japonicum USDA 110]
gi|27356439|dbj|BAC53419.1| aspartate racemase [Bradyrhizobium japonicum USDA 110]
Length = 229
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 15/137 (10%), Positives = 43/137 (31%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + L+ V+ NT L + + ++ F+ + Q +
Sbjct: 63 SLAEVAQRLESAGARAIVLCTNTMHKLAPEIVAKL--TIPFVHIGDSTAQRIRSKGYRRV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + ++ + + +R+ + + +
Sbjct: 121 GLLGTKFTMEEDFYIDRLRAHDLDVLVPPAEARADVNRIIYDELCLGNVAAPSRCRYQEV 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 181 MAALVARGAECIILGCT 197
>gi|325262389|ref|ZP_08129126.1| putative aspartate racemase [Clostridium sp. D5]
gi|324032221|gb|EGB93499.1| putative aspartate racemase [Clostridium sp. D5]
Length = 230
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 4/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+ +I NT + +++S + + A Q Q
Sbjct: 63 ILGEAAKGLEAAGADFILICTNTMHKVA-PQIQSMI-HIPIIHIADATAQELEKCQIRRA 120
Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T+ + + LI + ++ + C KI+E+ +K+ +
Sbjct: 121 GLLGTKYTMTQAFYKQRLIDRGIDVVIPDGEDIDVMNDIIFHELCVGKIREES-RKKFQD 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ K D ++L CT
Sbjct: 180 IIDRLKDKGADGVILGCT 197
>gi|327401693|ref|YP_004342532.1| aspartate racemase [Archaeoglobus veneficus SNP6]
gi|327317201|gb|AEA47817.1| aspartate racemase [Archaeoglobus veneficus SNP6]
Length = 229
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 2/141 (1%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+K +I NT + +E++ S+ L + + +L
Sbjct: 67 AAQRLEKAGADFVIICTNTMHKVA-EEVQEGI-SIPLLHIADVTAEKIKEKGLRNVGLLG 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + + + I ++ V I E K+ +
Sbjct: 125 TKFTMEEDFYKKKLGESGIEVIIPEEDERVVVHSVIYNELCQGIIRQESKERFKEIIGNL 184
Query: 188 EGKRTDVIVLACTHYPLIVHV 208
K + IVL CT PL++
Sbjct: 185 VSKGAEGIVLGCTEIPLLIKQ 205
>gi|220904293|ref|YP_002479605.1| aspartate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868592|gb|ACL48927.1| aspartate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 238
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 45/152 (29%), Gaps = 20/152 (13%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + + ++ + CNTA TL M F+ + +
Sbjct: 64 IEAYLEAIQKVRSAGATKIA-MCCNTAHWGISTL------EQKSGMPFINVIYEVLMLVK 116
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T I +L++ L+ + + L S L + C IK K +
Sbjct: 117 KTGKKNIGLLASDGCLKGRVYEQYFEKLLPDVTL-LYPSDQLQREITRGICNIKNKSRLL 175
Query: 177 --------KKEIEGCFIEKEGKRTDVIVLACT 200
+ + D++++ CT
Sbjct: 176 PEDHPDRPRNIFTRVTAKMFDSGADLLIIGCT 207
>gi|294664647|ref|ZP_06729983.1| aspartate racemase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292605582|gb|EFF48897.1| aspartate racemase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 234
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 2/123 (1%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ NT + D + + P + L A A I +L T T+ + +
Sbjct: 81 DFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGISRIGLLGTRFTMEQPFY 138
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + + RV + + E ++ + E + I+L
Sbjct: 139 RQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIKPESRQYVCQVMTELGQQGAQAIIL 198
Query: 198 ACT 200
CT
Sbjct: 199 GCT 201
>gi|229069752|ref|ZP_04203037.1| hypothetical protein bcere0025_19550 [Bacillus cereus F65185]
gi|229079392|ref|ZP_04211934.1| hypothetical protein bcere0023_20470 [Bacillus cereus Rock4-2]
gi|228703925|gb|EEL56369.1| hypothetical protein bcere0023_20470 [Bacillus cereus Rock4-2]
gi|228713373|gb|EEL65263.1| hypothetical protein bcere0025_19550 [Bacillus cereus F65185]
Length = 231
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 47/131 (35%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + I + + + + ++V E G + + ++ + E
Sbjct: 129 MEQDFYKSRIEEHDIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYKRVIEELVQ 186
Query: 190 KRTDVIVLACT 200
K I+L CT
Sbjct: 187 KGAQGIILGCT 197
>gi|298253387|ref|ZP_06977179.1| aspartate racemase [Gardnerella vaginalis 5-1]
gi|297532782|gb|EFH71668.1| aspartate racemase [Gardnerella vaginalis 5-1]
Length = 242
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 20/161 (12%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPAT 131
V+ CNTA D+ ++ + + GAV + + ++ I L T +
Sbjct: 77 GASFIVLTCNTA-HYFYDKFQA-LTDVPIIHMPRGAVAEVSKRYPKSKCNRIGFLGTAGS 134
Query: 132 LRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+ I + + ++ V + + E +
Sbjct: 135 RKAGVYQRAIEEAGYTFVAPDDDLQKRITSLIYDDV-KGTGDLDFHRYE--SVLSDMLDP 191
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226
R D ++L CT L V + P + +D + ++
Sbjct: 192 AGACRCDALILGCT--EL--SVLNEAFPLPQIPLVD-AQAV 227
>gi|257865939|ref|ZP_05645592.1| aspartate racemase [Enterococcus casseliflavus EC30]
gi|257872272|ref|ZP_05651925.1| aspartate racemase [Enterococcus casseliflavus EC10]
gi|257875566|ref|ZP_05655219.1| aspartate racemase [Enterococcus casseliflavus EC20]
gi|257799873|gb|EEV28925.1| aspartate racemase [Enterococcus casseliflavus EC30]
gi|257806436|gb|EEV35258.1| aspartate racemase [Enterococcus casseliflavus EC10]
gi|257809732|gb|EEV38552.1| aspartate racemase [Enterococcus casseliflavus EC20]
Length = 236
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 8/138 (5%)
Query: 67 LFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
L DI + +P V+ CNTA DEL++ A K +G ++
Sbjct: 65 LMDDIEKQNLLKPNFIVLTCNTA-HYFFDELQAATEIEILHMPREAAKVVFEKGVTGKVA 123
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
L T +++ + + + + + +V + D + +E+
Sbjct: 124 FLGTEGSVKAGIYEKELRKFGLDVY---LPEPTIQKKVNTLIYDRIKENDHLDQELYFEI 180
Query: 185 IEKEGKRT--DVIVLACT 200
+E+ +R + +VL CT
Sbjct: 181 LEEVTERIGCESVVLGCT 198
>gi|227114407|ref|ZP_03828063.1| putative aspartate/glutamate racemase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 236
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 51/159 (32%), Gaps = 9/159 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VI NT + D + L A + + +L T T
Sbjct: 73 LRQAGAEAIVICTNTMHKVADDV--EHACQLPLLHIADATGASLKQHGLKKVGLLGTRYT 130
Query: 132 LRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + I + + + +R+ + D ++ + E +
Sbjct: 131 MEQDFYRQRIQERFGVEVIVPDHEGKEAVNRIIYDELCLGNINDASRQIYRDIIQQLEQQ 190
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS--DSIA 227
+ I+L CT PL++ + V D S +IA
Sbjct: 191 GAEGIILGCTEIPLLISA-QDA---KVPLFDTSRLHAIA 225
>gi|42779389|ref|NP_976636.1| aspartate racemase [Bacillus cereus ATCC 10987]
gi|42735305|gb|AAS39244.1| aspartate racemase [Bacillus cereus ATCC 10987]
Length = 234
Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 56/170 (32%), Gaps = 11/170 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L VIACNTA + ++ L + + +L+T T
Sbjct: 71 LQNAGADFLVIACNTA--HFFYKAVKRSVNIPILHMPLETARFVQENNFRKVGLLATDGT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190
++ N Y + + + +V E IK + + +K +
Sbjct: 129 VKAELYQNSCQDY--RIDVID-PDKEMQKKVMEGIYAIKSGDLKTGCLHLSMVADKLKES 185
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ I+ CT PL++ + +D ++ +A+ + + T
Sbjct: 186 GAEAIIAGCTEVPLVLKS-----SENICVIDPTEIVAKVVIKIANKTETE 230
>gi|289423113|ref|ZP_06424928.1| aspartate racemase [Peptostreptococcus anaerobius 653-L]
gi|289156444|gb|EFD05094.1| aspartate racemase [Peptostreptococcus anaerobius 653-L]
Length = 240
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ V+ CNTA D+++ + ++ L + A I I++T
Sbjct: 74 LEACGVDFMVLTCNTA-HYFYDKIKDSI-NVPILNMLEETVGHAIKKGHKKIGIMATTGN 131
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
++ ++ S +I ++ ++ G K DE + ++ +
Sbjct: 132 IKTGLYQSMCQSKGVDYYILDDDMQKKVMKIIYDDVKAGKKADMDEFNEIVD----VLKA 187
Query: 190 KRTDVIVLACT 200
D +L CT
Sbjct: 188 NGCDCAILGCT 198
>gi|15891841|ref|NP_357513.1| hydantoin racemase [Agrobacterium tumefaciens str. C58]
gi|15160325|gb|AAK90298.1| hydantoin Racemase [Agrobacterium tumefaciens str. C58]
gi|38016571|gb|AAR07619.1| hydantoin racemase 2 [Agrobacterium tumefaciens str. C58]
Length = 247
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 25/164 (15%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+VIAC D R+ F + +G A A A+ + T R
Sbjct: 68 GVDAAVIAC--FDDTGLDAARA-FCDIPVIGLCEAAVSATAFIAQK--FTIVTTMERSRL 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L+H Y ++ ++ I +E+ A + +++EI + + R + I
Sbjct: 123 PLEHLVHRYGMSARCNVRAADIPVLSLEDPASN---ARERLRQEIA---LALKEDRAEAI 176
Query: 196 VLAC------THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
VL C T R V +D + ++A L
Sbjct: 177 VLGCAGMADLT------AELRAEFG--VPVVDGVAAAVKQAESL 212
>gi|300725002|ref|YP_003714327.1| putative aspartate racemase [Xenorhabdus nematophila ATCC 19061]
gi|297631544|emb|CBJ92251.1| putative aspartate racemase [Xenorhabdus nematophila ATCC 19061]
Length = 230
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 8/138 (5%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
M IL+ ++ CNTA DEL+++ + FL V ++
Sbjct: 64 MLAALRILEAAGAECIIMPCNTA-HYWYDELKAS-TKIPFLNIVEVTCNKIVSEGINNVA 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEG 182
IL+T T++ + + ++ V + R+ E ++ + IE
Sbjct: 122 ILATTGTIKIGLYQDRLRKEN----VNFVVPDDIQQRIIMESILAYKSGDGEKAYQLIES 177
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + + ++ CT
Sbjct: 178 VITQLKHVGVEHFIMGCT 195
>gi|229029942|ref|ZP_04186010.1| hypothetical protein bcere0028_20240 [Bacillus cereus AH1271]
gi|228731369|gb|EEL82283.1| hypothetical protein bcere0028_20240 [Bacillus cereus AH1271]
Length = 232
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT + ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEIKKKDIQKVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + I + + + V E I E K + +++
Sbjct: 129 MEQDFYKLRIEENHIKVMVPSKKDRDKVNEVIYTELCLGKITSPSREYYKRVIEELVQEG 188
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 189 AQGI---ILGCT 197
>gi|254169000|ref|ZP_04875839.1| aspartate racemase subfamily [Aciduliprofundum boonei T469]
gi|197622106|gb|EDY34682.1| aspartate racemase subfamily [Aciduliprofundum boonei T469]
Length = 225
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 17/145 (11%), Positives = 51/145 (35%), Gaps = 13/145 (8%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
++ + L+ + ++ NT ++ D L + + + A+ + A
Sbjct: 57 REIYLLEIIKALEHAGAEIIALSANTP-HIVFDSLAKK-TNAKMISIIDALAEEAKNKGY 114
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-----EYACGIKIKEDE 175
+ ++ T T+ + + + + + ++ E G+ ++
Sbjct: 115 KKLLLMGTKTTMTSGFYKRKLEEHGFEVIVPE----EYVDEIDRIISRELGYGVLKSKNR 170
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
+ +E +K+ + D +L CT
Sbjct: 171 LINIVESY--KKKYEDLDAAILGCT 193
>gi|218507901|ref|ZP_03505779.1| probable aspartate racemase protein [Rhizobium etli Brasil 5]
Length = 261
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 56/181 (30%), Gaps = 18/181 (9%)
Query: 24 GGLIVLQKMRFLMPEYHFIYV---ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
GGL + + + + + D G +RL + + +
Sbjct: 63 GGLASAEIILHSVNFEEIVALQKAGDWAGA----------ARRLGDVAERLQAAGAGCIL 112
Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
+ C NT LI DE+ + S+ + + ++ +L+T T+ + +
Sbjct: 113 I--CTNTM-HLIADEVAAKV-SVPLIHIIDETAKSLHAAGRKRPLLLATRYTMEHGFYAE 168
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ S + + + D ++++ D I+L C
Sbjct: 169 RMKSLGLDIMVPEAADRTTVHDIIFNELCAGRVHDRSREKLIDIIDRAVENGADSIILGC 228
Query: 200 T 200
T
Sbjct: 229 T 229
>gi|294793056|ref|ZP_06758202.1| putative aspartate racemase [Veillonella sp. 6_1_27]
gi|294794905|ref|ZP_06760040.1| putative aspartate racemase [Veillonella sp. 3_1_44]
gi|294454267|gb|EFG22641.1| putative aspartate racemase [Veillonella sp. 3_1_44]
gi|294456001|gb|EFG24365.1| putative aspartate racemase [Veillonella sp. 6_1_27]
Length = 231
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 45/214 (21%)
Query: 14 NSILIFDSGIGGLI---------VLQK-MRFLMPEYH----FIYVADDVGFPYGNWEDHA 59
+I + IGG+ VL + ++ ++ H +Y D
Sbjct: 2 KTIGL----IGGMSWESTITYYQVLNETIKQVLGGLHSAKCILYSVD----------FEE 47
Query: 60 LKK--------RLMFLFSDI---LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108
++K R + SD L+K VI NT + DE++ + L
Sbjct: 48 IEKCQANGDWVRSAEILSDAAQSLEKAGADYIVICTNTMHKVA-DEIKRHI-HIPLLHI- 104
Query: 109 PAIKQAAAYTQSG--LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166
A A +SG + +L T T+++ + ++ + I + L + +
Sbjct: 105 -AEMTAVELEKSGITKVGLLGTKYTMQQDFYKCILENRGIHVVIPNEDQVELVNDIIYNE 163
Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ + +E K++ + ++L CT
Sbjct: 164 LCLGVISNESKQQYLDIIGDLVKSGVQGVILGCT 197
>gi|257470749|ref|ZP_05634839.1| putative amino acid recemase [Fusobacterium ulcerans ATCC 49185]
gi|317064954|ref|ZP_07929439.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313690630|gb|EFS27465.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 230
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 6/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+K VI NT + +++ ++ L A +
Sbjct: 61 AKILTEAAQSLEKAGADFIVICTNTMHKIA-PDIQKNI-NIPILHIAEATADELDKKEIK 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKE 179
+++L T T+ + + N + + I +RV EE G + KK
Sbjct: 119 KVALLGTKYTMEQDFYKNKLIDRGIEVVIPDDEDRAEVNRVIYEELCLGKILPAS--KKR 176
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 177 FLDIMDKLAKNGAQGVILGCT 197
>gi|291485976|dbj|BAI87051.1| amino acid racemase [Bacillus subtilis subsp. natto BEST195]
Length = 227
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 64/190 (33%), Gaps = 16/190 (8%)
Query: 52 YGNWEDH--ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109
Y + +KK ++ L+K + CNTA + +E++
Sbjct: 49 YADRPIDHDEMKKAIIDGAVK-LEKTDVDFIALPCNTA-HVYYEEIQQALSVPMLHIVEE 106
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
IK+ + + +L T T++ ++ + V V + I
Sbjct: 107 TIKEIPHPAKKAV--VLGTEPTIQSAIYQKVLEENGQEV----VHKDHWQQAVNQLIAAI 160
Query: 170 KIKED-EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
K E + + E+ + D+I+ ACT ++ + P +D+S +A+
Sbjct: 161 KQPNHMEYSQSLWQTLYEEISQHADIIISACTDLNAVLDHIQSEIP----MIDSSACLAK 216
Query: 229 R-ARCLLPRI 237
L
Sbjct: 217 STVSTYLAYQ 226
>gi|228988009|ref|ZP_04148113.1| amino-acid racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228771726|gb|EEM20188.1| amino-acid racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 224
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L +EL+ + S+ L V QA + +++L+T AT
Sbjct: 70 LESTGVEFLAMPCNTA-HLYFEELQRSL-SVPILNIVDETLQAIPEN-TKRVALLATEAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I I + + + IK + E E+ + +
Sbjct: 127 VQAGIYQDGIIKRN----IEYIHHEKWQESINQIISCIKGGKIEKAHELWNVLVLQLRDE 182
Query: 192 TDVIVLACT 200
D ++ACT
Sbjct: 183 VDTAIIACT 191
>gi|269967741|ref|ZP_06181789.1| hypothetical protein VMC_32190 [Vibrio alginolyticus 40B]
gi|269827647|gb|EEZ81933.1| hypothetical protein VMC_32190 [Vibrio alginolyticus 40B]
Length = 232
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 52/164 (31%), Gaps = 31/164 (18%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++K +I NT + ++ ++ ++ L A + + +L T T
Sbjct: 71 IEKGGADFILICTNTMHKVA-PQIEASV-NIPILHIADATAELLREKGVQKVGLLGTQFT 128
Query: 132 LRRTYTSN----------LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ + + +I + +H + + + C +IKE+ +
Sbjct: 129 MEQDFYKGRLSDLYGLDVVIPDQDDRSKVHNI--------IYKELCQGEIKEES-RTIYL 179
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222
+ + + ++L CT L V LD
Sbjct: 180 QIIEKLKEHGAEAVILGCT-------EIALLVNQSHTEVTLLDT 216
>gi|325689132|gb|EGD31139.1| aspartate racemase [Streptococcus sanguinis SK115]
Length = 230
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ + L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQEQI-TIPILHIAQATAQALLADGIQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + + +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLT 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 180 IIDDLKKAGAEAVILGCT 197
>gi|241205619|ref|YP_002976715.1| Asp/Glu/hydantoin racemase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859509|gb|ACS57176.1| Asp/Glu/hydantoin racemase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 247
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 64/173 (36%), Gaps = 23/173 (13%)
Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123
L +++ ++ +VIAC + R TF + LG A+ A Q +
Sbjct: 57 LLAELRERQGVGYDAAVIAC--FDDTGLEAAR-TFADVPILGLCESAVVTAGFLAQRFTV 113
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
T R NL+ Y + +S I +E+ A G +++ EIE
Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGDRAKVRASDIPVLELEDPASGAI---GKLRAEIERA 167
Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+E + IVL C T + +Q+ V +D + ++A L
Sbjct: 168 LLE---DGAEAIVLGCAGMT---DLARELQQIYG--VPVVDGVAAAVKQAEAL 212
>gi|119026105|ref|YP_909950.1| aspartate racemase [Bifidobacterium adolescentis ATCC 15703]
gi|118765689|dbj|BAF39868.1| aspartate racemase [Bifidobacterium adolescentis ATCC 15703]
Length = 241
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 14/135 (10%)
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPA 130
V+ CNTA D+ ++ ++ L GAV + Q + + L T
Sbjct: 76 MGASFIVLTCNTA-HYFYDDFQA-LTTVPILHMPRGAVARMAQRYPKDRFPRVGFLGTVG 133
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRV-----EEYACGIKIKEDEIKKEIEGCFI 185
+ + + + + L +R+ ++ ++ + + +
Sbjct: 134 SRKSGVYKRAVEE-AGYTFVE--PTDELQARITSLIYDDVKGSGELNLERYESVLRDMLD 190
Query: 186 EKEGKRTDVIVLACT 200
D ++L CT
Sbjct: 191 PAGPCACDTLILGCT 205
>gi|228997316|ref|ZP_04156938.1| Aspartate racemase [Bacillus mycoides Rock3-17]
gi|229004941|ref|ZP_04162668.1| Aspartate racemase [Bacillus mycoides Rock1-4]
gi|228756289|gb|EEM05607.1| Aspartate racemase [Bacillus mycoides Rock1-4]
gi|228762408|gb|EEM11333.1| Aspartate racemase [Bacillus mycoides Rock3-17]
Length = 243
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+K VI NT + ++ S+ L A +
Sbjct: 66 VLGEAAYSLEKAGADFIVICTNTM-HKVISNIKDKV-SIPILHIADATAMEIKKQGIRSV 123
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + I + I + L +R+ + + +
Sbjct: 124 GLLGTKYTMEQDFYKSRIEEKGMRVMIPNETDRELVNRIIYNELCLGKVNQTSRDSYKEI 183
Query: 184 FIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 184 INRFVQNGAEGIILGCT 200
>gi|299769459|ref|YP_003731485.1| aspartate racemase [Acinetobacter sp. DR1]
gi|298699547|gb|ADI90112.1| aspartate racemase [Acinetobacter sp. DR1]
Length = 250
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 7/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
L ++ + V C NT + S+ FL A +
Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAAQI--EDLISIPFLHIADATAKEILSQNI 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179
G +++L T T+ + + + Y I + + S + E C I D ++
Sbjct: 118 GKVALLGTAFTMEQDFYKARLQDYGIHVVIPNEADRKIVHSIIYEELCLGVINPDSQQQY 177
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
I + T ++L CT
Sbjct: 178 IA-IVERLIAEGTQGVILGCT 197
>gi|317129519|ref|YP_004095801.1| aspartate racemase [Bacillus cellulosilyticus DSM 2522]
gi|315474467|gb|ADU31070.1| aspartate racemase [Bacillus cellulosilyticus DSM 2522]
Length = 236
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 38/177 (21%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQS--GLISILST 128
L+ +I C+TA EL+ ++ + + + + T++ + IL+T
Sbjct: 74 LEAAGADFIIIPCHTA-HYWFRELQDQL-NIPIINMIDNTVNYINSLTKNESQKVLILAT 131
Query: 129 PATLRRTYTSNL--IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE-GCFI 185
T+ N I + EE K + +E +I
Sbjct: 132 RGTIYSKIFQNEFMIKRI-----------PYVVPNSEEQEIVSKAIDFTKSNLVETNPYI 180
Query: 186 EKEGKRTD--------VIVL-ACTHYPLIVHVFRQLSPW---PVDWLDNSDSIARRA 230
K D +L CT L P+ +D+S +A+RA
Sbjct: 181 SKLNNMIDNYITGNHITCILAGCT-------EISLLLPYLTHKCSKIDSSLLLAKRA 230
>gi|325266150|ref|ZP_08132834.1| aspartate racemase [Kingella denitrificans ATCC 33394]
gi|324982380|gb|EGC18008.1| aspartate racemase [Kingella denitrificans ATCC 33394]
Length = 229
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 20/146 (13%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
L+ + L ++A NT + + S+ FL + A+ QA +
Sbjct: 63 LLAQSARTLQNAGAQGILLATNTMHKVAVPIAAAV--SVPFLHILDAVAQAVRVQGFATV 120
Query: 124 SILSTPATLRRTYT---------SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
+L T T++ + L+ Q IH + + + C +I+ED
Sbjct: 121 GLLGTRFTMQDGFYTDGLAERGIRTLVPDEAEQAEIHRI--------IFDELCTGQIRED 172
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200
++ + + ++L CT
Sbjct: 173 SKRRYL-NAIAALAKRGAQAVILGCT 197
>gi|90418902|ref|ZP_01226813.1| aspartate racemase [Aurantimonas manganoxydans SI85-9A1]
gi|90336982|gb|EAS50687.1| aspartate racemase [Aurantimonas manganoxydans SI85-9A1]
Length = 231
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 37/147 (25%), Gaps = 10/147 (6%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
L RL+ + +L + C NT + L +
Sbjct: 58 DELTARLVEAARKLETAGADILLI--CTNTM--HRMAPAIEAAVQVPLLHIADPTAERIK 113
Query: 117 YTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKE 173
+ +L T T+ + + L + + RV EE G +
Sbjct: 114 AAGLQKVGLLGTAFTMEQDFYKGRLAERHGLNVLVPNAEDRATIHRVIYEELVAGQIVDT 173
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 174 S--RDAYRAVIARLVDAGAQSVILGCT 198
>gi|30262238|ref|NP_844615.1| aspartate racemase family protein [Bacillus anthracis str. Ames]
gi|47527517|ref|YP_018866.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185078|ref|YP_028330.1| aspartate racemase family protein [Bacillus anthracis str. Sterne]
gi|65319528|ref|ZP_00392487.1| COG1794: Aspartate racemase [Bacillus anthracis str. A2012]
gi|165872211|ref|ZP_02216849.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167632939|ref|ZP_02391265.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|167641077|ref|ZP_02399333.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|170686450|ref|ZP_02877671.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|170708451|ref|ZP_02898894.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|177650980|ref|ZP_02933877.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
gi|190567928|ref|ZP_03020839.1| aspartate racemase family protein [Bacillus anthracis
Tsiankovskii-I]
gi|227814962|ref|YP_002814971.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|229603763|ref|YP_002866580.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|254684804|ref|ZP_05148664.1| aspartate racemase family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254737250|ref|ZP_05194954.1| aspartate racemase family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254743563|ref|ZP_05201248.1| aspartate racemase family protein [Bacillus anthracis str. Kruger
B]
gi|254751566|ref|ZP_05203603.1| aspartate racemase family protein [Bacillus anthracis str. Vollum]
gi|254759081|ref|ZP_05211108.1| aspartate racemase family protein [Bacillus anthracis str.
Australia 94]
gi|30256869|gb|AAP26101.1| aspartate racemase family protein [Bacillus anthracis str. Ames]
gi|47502665|gb|AAT31341.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179005|gb|AAT54381.1| aspartate racemase family protein [Bacillus anthracis str. Sterne]
gi|164712004|gb|EDR17543.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167510975|gb|EDR86365.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|167531751|gb|EDR94416.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|170126690|gb|EDS95574.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|170669526|gb|EDT20268.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|172083441|gb|EDT68502.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
gi|190560983|gb|EDV14957.1| aspartate racemase family protein [Bacillus anthracis
Tsiankovskii-I]
gi|227004374|gb|ACP14117.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|229268171|gb|ACQ49808.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
Length = 235
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 8/140 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L K +I NT ++ ++++ + L A + +
Sbjct: 63 ILENAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180
+L T T+ + + + I + + + V E I + E K +
Sbjct: 121 GLLGTKYTMEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRV 180
Query: 181 EGCFIEKEGKRTDVIVLACT 200
I++ K +L CT
Sbjct: 181 IENLIQEGAKGI---ILGCT 197
>gi|327191448|gb|EGE58470.1| putative aspartate racemase protein [Rhizobium etli CNPAF512]
Length = 281
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 5/140 (3%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+RL + + + + C NT LI DE+ + S+ + + ++
Sbjct: 104 RRLGDVAERLQAAGAGCILI--CTNTM-HLIADEVAAKV-SVPLIHIIDETAKSLHAAGR 159
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+L+T T+ + + + S + + + D ++++
Sbjct: 160 KRPLLLATRYTMEHGFYAERMKSLGLDIMVPEAADRTTVHDIIFNELCAGRVHDRSREKL 219
Query: 181 EGCFIEKEGKRTDVIVLACT 200
D I+L CT
Sbjct: 220 IDIIDRAVENGADSIILGCT 239
>gi|312897382|ref|ZP_07756806.1| aspartate racemase [Megasphaera micronuciformis F0359]
gi|310621443|gb|EFQ04979.1| aspartate racemase [Megasphaera micronuciformis F0359]
Length = 228
Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 12/172 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIA--CNTAFTLIKDELRSTFPSMAFLGAVPA 110
G + L L ++++ V+A NT ++ D+L
Sbjct: 51 GQKDYAGLTAYLDKGITNLVAGG---AQVVAMTGNTP-HIVFDKLSEKSHVPLVSSVAVT 106
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
A +L T T+R + + + + + + E
Sbjct: 107 AHYVAEQ-GLKRPLLLGTLFTMREDFFKKAFRDKGIEAIVPEEADQLKVHKFIEKELEAG 165
Query: 171 IKEDEIKKEIEGCFIEKEG-KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
+ +K E G D ++L CT P++ V +D
Sbjct: 166 SITETAQKYFSNLVEEMIGSHHIDTLILGCTELPILFKT----MNISVPVVD 213
>gi|229133055|ref|ZP_04261895.1| hypothetical protein bcere0014_19810 [Bacillus cereus BDRD-ST196]
gi|228650412|gb|EEL06407.1| hypothetical protein bcere0014_19810 [Bacillus cereus BDRD-ST196]
Length = 232
Score = 46.5 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 4/130 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ ++ L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHITDATAKEINRKGIQSVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHL-VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + + I + + L + + + C KI ++ + E K
Sbjct: 129 MEQDFYKSRIEENDIKVIVPLGKDREKINEVIYKELCLGKITSQS-REYYKRVIEELVQK 187
Query: 191 RTDVIVLACT 200
I+L CT
Sbjct: 188 GAQGIILGCT 197
>gi|229085172|ref|ZP_04217419.1| Aspartate racemase [Bacillus cereus Rock3-44]
gi|228698153|gb|EEL50891.1| Aspartate racemase [Bacillus cereus Rock3-44]
Length = 230
Score = 46.5 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+K VI NT + ++ ++ L A +
Sbjct: 63 ILGEAAYSLEKAGADFIVICTNTM-HKVISNIKENV-NIPILHIADATAMEIKKHGIRSV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + I + I + +R+ + + +
Sbjct: 121 GLLGTKYTMEQDFYKSCIEEKGMKVIIPNEMDREIVNRIIYNELCLGKINQTARDSYKRI 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 181 IHSLVQNGAEGIILGCT 197
>gi|194014592|ref|ZP_03053209.1| aspartate racemase [Bacillus pumilus ATCC 7061]
gi|194013618|gb|EDW23183.1| aspartate racemase [Bacillus pumilus ATCC 7061]
Length = 235
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 26/181 (14%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTP 129
L++ +IACNTA + +R + + + ++ A + + +L T
Sbjct: 71 LERAGADFILIACNTA-HFFLENVRHS-THIPIMNM--PLETANYLNKHHYTSVGLLCTD 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILAS----RVEEYACGIKIKEDEIKKEIEGCFI 185
TL+ + + V+ E + EI
Sbjct: 127 GTLKTQLYQRACAHHKIDVMTPSENLQKNVMNGIYAVKAGKLSEGESELALAAEI----- 181
Query: 186 EKEGKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRINTHQ 241
+ + I+ CT PL + V +D + +A+ A L L ++N
Sbjct: 182 -LINQGAEAIIAGCTEIPLVLRST------KEVKVIDPTVILAKEAVKLVYELEKLNIKS 234
Query: 242 T 242
T
Sbjct: 235 T 235
>gi|254362280|ref|ZP_04978393.1| aspartate racemase [Mannheimia haemolytica PHL213]
gi|261492806|ref|ZP_05989353.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494828|ref|ZP_05991306.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|153093857|gb|EDN74789.1| aspartate racemase [Mannheimia haemolytica PHL213]
gi|261309539|gb|EEY10764.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311488|gb|EEY12644.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 229
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 57/140 (40%), Gaps = 4/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + +L++ ++A NT + D++ S+ S+ FL + + +A +
Sbjct: 61 AEILSEQARLLEQAGAEGILLATNTMHKIA-DQI-SSHISVPFLHILDCVAEAISAQGLQ 118
Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+++L T T+ + + L+ ++ + + + E C KI E K
Sbjct: 119 KVALLGTKFTMSDNFYKDGLLERGITSIVPDEETQQEIHRIIFEELCLGKITESA-KAFY 177
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 178 LQTIQQLSEQGAEGVILGCT 197
>gi|310778942|ref|YP_003967275.1| aspartate racemase [Ilyobacter polytropus DSM 2926]
gi|309748265|gb|ADO82927.1| aspartate racemase [Ilyobacter polytropus DSM 2926]
Length = 233
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 51/165 (30%), Gaps = 18/165 (10%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPA 130
L + ++ CNTA EL K+ ++ I + ST
Sbjct: 70 LQVMGSDVIIMPCNTA-HYFYKELTEHLTIPFINMIEETAKEIKEIDPETKKIFLFSTQG 128
Query: 131 TLRRTYTSNLIHSYV-----SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
T + + +Y + + V + + G ++ K +
Sbjct: 129 TYKAKIYDKVFENYGLEILRPEKSVQSVVT----DIIYSIKKGDTALKNIDKNILTSYIE 184
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
EGK +L CT P+ + + +D + +A+ A
Sbjct: 185 SIEGKNI---ILGCTELPVAFD----ILGIKKNCIDPTKILAKSA 222
>gi|218663207|ref|ZP_03519137.1| aspartate racemase [Rhizobium etli IE4771]
Length = 261
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 46/140 (32%), Gaps = 5/140 (3%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+RL + + + + C NT LI D++ + S+ + + ++
Sbjct: 84 RRLGEVAERLQAAGAGCILI--CTNTM-HLIADKVAAKI-SVPLIHIIDETAKSLHAAGR 139
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+L+T T+ + + + S + + + D ++++
Sbjct: 140 KRPLLLATRYTMEHGFYAERMKSLGLDIMVPDAADRTTVHDIIFNELCAGKVRDSSREKL 199
Query: 181 EGCFIEKEGKRTDVIVLACT 200
D I+L CT
Sbjct: 200 IDIIDRAVEHGADSIILGCT 219
>gi|229178591|ref|ZP_04305955.1| hypothetical protein bcere0005_19490 [Bacillus cereus 172560W]
gi|228604749|gb|EEK62206.1| hypothetical protein bcere0005_19490 [Bacillus cereus 172560W]
Length = 231
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + I + + + ++V E G + + ++ + E
Sbjct: 129 MEQDFYKSRIEENNIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYKRVIEELVQ 186
Query: 190 KRTDVIVLACT 200
K I+L CT
Sbjct: 187 KGAQGIILGCT 197
>gi|302542803|ref|ZP_07295145.1| aspartate racemase [Streptomyces hygroscopicus ATCC 53653]
gi|302460421|gb|EFL23514.1| aspartate racemase [Streptomyces himastatinicus ATCC 53653]
Length = 257
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 33/112 (29%), Gaps = 15/112 (13%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFSD------ILDKY-------QPVLSVIACNTAFTLIK 92
D P W D + R L L + L + CNTA
Sbjct: 46 DQDHVPVVIWADPTIPDRTAALLDHGADPSPWLKRGAHYVALAGANLIAVPCNTAHAF-L 104
Query: 93 DELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS 143
+RS + L V ++ A + IL+T TL N +
Sbjct: 105 GAVRSAAAPVPVLDMVAETAEEVARSQPGATVGILATTGTLTAELYQNALSR 156
>gi|294626042|ref|ZP_06704651.1| aspartate racemase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292599644|gb|EFF43772.1| aspartate racemase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 234
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 2/123 (1%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ NT + D + + P + L A A I +L T T+ + +
Sbjct: 81 DFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGISRIGLLGTRFTMEQPFY 138
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + + RV + + E ++ + E I+L
Sbjct: 139 RQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIKPESRQYVCQVMTELGQHGAQAIIL 198
Query: 198 ACT 200
CT
Sbjct: 199 GCT 201
>gi|294635246|ref|ZP_06713748.1| putative aspartate racemase [Edwardsiella tarda ATCC 23685]
gi|291091363|gb|EFE23924.1| putative aspartate racemase [Edwardsiella tarda ATCC 23685]
Length = 316
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 42/130 (32%), Gaps = 6/130 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ VI CNTA ELR + + L V A + + I +L+T AT
Sbjct: 148 LEQAGAECIVIPCNTA-HFWFKELRQSC-HVELLNIVEATMEEVCASGQQKIGLLATDAT 205
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASR-VEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L I + C + G + + ++ + +
Sbjct: 206 LYMGLYQQAIEARGLCCIRPDKPGQEQVMASIYALKAGDAARARAMMEQQAAALFARGAQ 265
Query: 191 RTDVIVLACT 200
VL CT
Sbjct: 266 LI---VLGCT 272
>gi|91792733|ref|YP_562384.1| aspartate racemase [Shewanella denitrificans OS217]
gi|91714735|gb|ABE54661.1| Aspartate racemase [Shewanella denitrificans OS217]
Length = 233
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 1/101 (0%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159
++ + A Q + +L T T+ + L + + I L
Sbjct: 98 NIPLIHIADATAQQLILDGVRRVGLLGTQFTMAEDFYKGRLRDKFDIEVIIPDEEEQQLV 157
Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+V + E +++ + + + ++L CT
Sbjct: 158 HQVIYTELCQGVIRSESRQQYVAIIEKLQQQGAQAVILGCT 198
>gi|10567583|gb|AAG18488.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI P P + + D+I + F
Sbjct: 1 GCTHFPLIAQKIESYFMDHFALPTPPLLIHSGDAIVEYLQQ--KYTLKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVVWLEKQAKEWL 74
>gi|325577164|ref|ZP_08147648.1| aspartate racemase [Haemophilus parainfluenzae ATCC 33392]
gi|325160746|gb|EGC72867.1| aspartate racemase [Haemophilus parainfluenzae ATCC 33392]
Length = 232
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 48/152 (31%), Gaps = 27/152 (17%)
Query: 65 MFLFSDILDKYQPVL-------SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+IL + L V+A NT + ++ S+ FL + A A
Sbjct: 57 WQRAGEILAEAGKKLEMIGAEGIVLATNTMHKVAPQIEQA--ISIPFLHILDATADAIKS 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI- 176
+++L T T+ + + + M + E +I DE+
Sbjct: 115 RGLNKVALLGTKFTMSDNFYRDGLQQR---------GIMPIVPIDETQNEIHRIIFDELC 165
Query: 177 --------KKEIEGCFIEKEGKRTDVIVLACT 200
K + + + + ++L CT
Sbjct: 166 VGKFLPTSKAFYLKIIDKLKNQGAEGVILGCT 197
>gi|315649210|ref|ZP_07902300.1| aspartate racemase [Paenibacillus vortex V453]
gi|315275429|gb|EFU38787.1| aspartate racemase [Paenibacillus vortex V453]
Length = 236
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 52/149 (34%), Gaps = 6/149 (4%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
GNW++ R+M + L+ L VI NT + K+ S+ + +
Sbjct: 55 GNWDEA---ARIMIDIAQKLETAGADLLVICTNTMHKMAKEV--EESVSIPLIHIADSTA 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+++L T T+ + + L + + + ++ + + I
Sbjct: 110 TRIVTDGIKKVALLGTAFTMEQDFYKGRLTEKFELEVIVPNEDDRLVIHDIIYQELCLGI 169
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+E K+ + + I+L CT
Sbjct: 170 ISEESKQTYLKIINHLIQQGAEGIILGCT 198
>gi|229190307|ref|ZP_04317308.1| hypothetical protein bcere0002_19750 [Bacillus cereus ATCC 10876]
gi|228593091|gb|EEK50909.1| hypothetical protein bcere0002_19750 [Bacillus cereus ATCC 10876]
Length = 231
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + I + + + ++V E G + + ++ + E
Sbjct: 129 MEQDFYKSRIEENNIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYKRVIEELVQ 186
Query: 190 KRTDVIVLACT 200
K I+L CT
Sbjct: 187 KGAQGIILGCT 197
>gi|48477221|ref|YP_022927.1| aspartate racemase [Picrophilus torridus DSM 9790]
gi|48429869|gb|AAT42734.1| aspartate racemase [Picrophilus torridus DSM 9790]
Length = 232
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 14/161 (8%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L+ +ACNTA + FL + + + +LST
Sbjct: 69 KYLESIGIDTIGMACNTA----HIWFKEFVYKSNFLNMIDLTASVLKKSGFKNVLLLSTN 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + + Y I V + +K+ + ++ +E I
Sbjct: 125 ATVSSGIYTGKLRDYNINTVIPDQ------DIVMKSIHYVKVNDTKMARETIEPVINGHR 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
D ++LACT + V + + +D+ +++A
Sbjct: 179 NEVDALLLACT----EMPVIISEKTYNIPVIDSDEALAAAL 215
>gi|163940018|ref|YP_001644902.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
gi|163862215|gb|ABY43274.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
Length = 232
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 4/130 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ ++ L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADATAKEINRKGIQSVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHL-VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + + I + + L + + + C KI ++ + E K
Sbjct: 129 MEQDFYKSRIEENDIKVIVPLGKDREKINEVIYKELCLGKITSQS-REYYKRVIEELVQK 187
Query: 191 RTDVIVLACT 200
I+L CT
Sbjct: 188 GAQGIILGCT 197
>gi|190575240|ref|YP_001973085.1| putative aspartate/glutamate racemase [Stenotrophomonas maltophilia
K279a]
gi|190013162|emb|CAQ46794.1| putative aspartate/glutamate racemase [Stenotrophomonas maltophilia
K279a]
Length = 230
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 39/130 (30%), Gaps = 3/130 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L L +I NT + ++ L QA + + +L T T
Sbjct: 71 LQAGGADLLLICTNTM--HKLTDRIEAACTLPLLHIADPTAQAIVQAGARKVGLLGTAFT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + L + + + + + + + ++ G +
Sbjct: 129 MEQDFYRGRLQDRFGLEVLVPEANDRRSVHDIIYQELIAGVVSEHSRQVYAGVIARLVAR 188
Query: 191 RTDVIVLACT 200
+ I+L CT
Sbjct: 189 GAEAIILGCT 198
>gi|228927293|ref|ZP_04090354.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228832369|gb|EEM77945.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 232
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + + V E I + E K + I++
Sbjct: 129 MEQDFYKSRIEENHIKVVVTSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188
Query: 189 GKRTDVIVLACT 200
K +L CT
Sbjct: 189 AKGI---ILGCT 197
>gi|229059895|ref|ZP_04197270.1| hypothetical protein bcere0026_20030 [Bacillus cereus AH603]
gi|228719440|gb|EEL71043.1| hypothetical protein bcere0026_20030 [Bacillus cereus AH603]
Length = 232
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 4/130 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ ++ L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADATAKEINRKGIQSVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHL-VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + + I + + L + + + C KI ++ + E K
Sbjct: 129 MEQDFYKSRIEENDIKVIVPLGKDREKINEVIYKELCLGKITSQS-REYYKRVIEELVQK 187
Query: 191 RTDVIVLACT 200
I+L CT
Sbjct: 188 GAQGIILGCT 197
>gi|229167064|ref|ZP_04294808.1| hypothetical protein bcere0007_20300 [Bacillus cereus AH621]
gi|228616417|gb|EEK73498.1| hypothetical protein bcere0007_20300 [Bacillus cereus AH621]
Length = 232
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 4/130 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ ++ L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADATAKEINRKGIQSVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHL-VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + + I + + L + + + C KI ++ + E K
Sbjct: 129 MEQDFYKSRIEENDIKVIVPLGKDREKINEVIYKELCLGKITSQS-REYYKRVIEELVQK 187
Query: 191 RTDVIVLACT 200
I+L CT
Sbjct: 188 GAQGIILGCT 197
>gi|262283680|ref|ZP_06061445.1| aspartate racemase [Streptococcus sp. 2_1_36FAA]
gi|262260737|gb|EEY79438.1| aspartate racemase [Streptococcus sp. 2_1_36FAA]
Length = 230
Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ + L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADVAQRLEQAGADFIVICTNTMHKVA-PQIQKKI-TIPILHIAQATAQALLADGIQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + + +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLT 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 180 IIDDLKKAGAEAVILGCT 197
>gi|322831851|ref|YP_004211878.1| aspartate racemase [Rahnella sp. Y9602]
gi|321167052|gb|ADW72751.1| aspartate racemase [Rahnella sp. Y9602]
Length = 232
Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 7/132 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + V+ NT + D + L A I +L T T
Sbjct: 71 LARAGAEVIVVCTNTMHKVADDI--ERIGGLPLLHIADATADKITGQGLHKIGLLGTRFT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + L + + + R+ EE G ++ + E + E
Sbjct: 129 MEQDFYRGRLQEKHQIDVVTPDEADRAIVHRIIYEELCLGRIKEDS--RAEYRRIIGKLE 186
Query: 189 GKRTDVIVLACT 200
+ + I+L CT
Sbjct: 187 QQGVEGIILGCT 198
>gi|229017533|ref|ZP_04174433.1| hypothetical protein bcere0030_20860 [Bacillus cereus AH1273]
gi|229023751|ref|ZP_04180240.1| hypothetical protein bcere0029_20840 [Bacillus cereus AH1272]
gi|228737548|gb|EEL88055.1| hypothetical protein bcere0029_20840 [Bacillus cereus AH1272]
gi|228743758|gb|EEL93860.1| hypothetical protein bcere0030_20860 [Bacillus cereus AH1273]
Length = 236
Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 42/129 (32%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K ++ NT + +++ S+ L A + + +L T T
Sbjct: 71 LEKGGADFIIVCTNTM-HKVIKHIKNRI-SIPILHIADATAKEIKQQGIQSVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + I + + +++ + + ++ + + +
Sbjct: 129 MEQDFYKLRIEENDIKVIVPTEEDRETVNKIIYNELCLGKINQQSREYFKSVMEDLVQRG 188
Query: 192 TDVIVLACT 200
I+L CT
Sbjct: 189 AKGIILGCT 197
>gi|329888424|ref|ZP_08267022.1| aspartate racemase [Brevundimonas diminuta ATCC 11568]
gi|328846980|gb|EGF96542.1| aspartate racemase [Brevundimonas diminuta ATCC 11568]
Length = 220
Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 64/173 (36%), Gaps = 24/173 (13%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + L + + CNTA +R+ + F+ + +AA T +
Sbjct: 58 RTLGEMARALKAAGAQVLAMPCNTAHAHA-GAIRAA--GLPFIDMIAETAKAAGATGARR 114
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR-----VEEYACGIKIKEDEIK 177
+ +L+TP + L ++ + +V+ LA R V + D+ +
Sbjct: 115 VGVLATPG------AALLYAEALAAEGLEMVA-PSLAERERFMQVVFGVKAGDVGPDQ-R 166
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD--WLDNSDSIAR 228
+ + ++ CT PL++ VD +D+++ +AR
Sbjct: 167 AAMRDLAKALIAAGAEAVIGGCTEVPLLLDQ------GDVDAPLIDSAEVLAR 213
>gi|19910920|dbj|BAB87711.1| glutamate racemase [Helicobacter pylori]
gi|19910922|dbj|BAB87712.1| glutamate racemase [Helicobacter pylori]
Length = 75
Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 9/78 (11%)
Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI H + + D+I + + F
Sbjct: 1 GCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQ---QKYALKNACAFPKVEFH 57
Query: 252 LSGKPDIAMRRLMQGFGL 269
SG ++ + L
Sbjct: 58 ASGDVVWLEKQAKEWLAL 75
>gi|254470848|ref|ZP_05084251.1| aspartate racemase [Pseudovibrio sp. JE062]
gi|211959990|gb|EEA95187.1| aspartate racemase [Pseudovibrio sp. JE062]
Length = 212
Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 21/147 (14%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
L+ + L+ VI NT + ++ ++ F+ A +
Sbjct: 36 LLKQAAHKLESAGADCIVICANTMHKVA-SYIQDGL-TIPFIHIAETTATAIQKVKRRKP 93
Query: 124 SILSTPATLRRTYTSNLIHSY----------VSQCHIHLVSSMILASRVEEYACGIKIKE 173
+L+T + + + Q +H ++ L C +I E
Sbjct: 94 LLLATRYLMEHDFYVKRLEELHGMSVVVPDNGGQAVVHDIAYNEL--------CRGQINE 145
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACT 200
D ++ + + + + D ++L CT
Sbjct: 146 DS-RRTLLQIVRKAQDQGADSVILGCT 171
>gi|254362765|ref|ZP_04978847.1| possible aspartate racemase [Mannheimia haemolytica PHL213]
gi|153094394|gb|EDN75243.1| possible aspartate racemase [Mannheimia haemolytica PHL213]
Length = 231
Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 64/199 (32%), Gaps = 37/199 (18%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFS-------------DILDKYQPVLSVIACNTAFTLIK 92
D P + R ++ + + L+ +IACNTA
Sbjct: 33 DQAHIPLLISSIPDIPDRTRYILANGENPAPVMEKYIEGLESAGATCIIIACNTA-HYWF 91
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
+ L++ + L + + + +L+T ATL + +
Sbjct: 92 EHLKAK-SQVEMLSMIDCVVDEVLKCGKWRVGLLATDATLAVDLYKKQL-----EAQGLT 145
Query: 153 VSSMILASRVEEYACGI-----KIKEDEIKKEIEGCFIEKEG---KRTDVIVLACTHYP- 203
E + +K E++K E +++ +VI+L CT P
Sbjct: 146 FICPT-----ENGQKAVMDSIYLLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPI 200
Query: 204 LIVHVFRQLSPWPVDWLDN 222
++ + P+ ++D+
Sbjct: 201 ILAQEIER---EPMRYVDS 216
>gi|319784854|ref|YP_004144330.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170742|gb|ADV14280.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 265
Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 8/172 (4%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLI 123
+ L+ + CNTA D+L + + + A+ + + G +
Sbjct: 69 LKAAVATLNALGVACVAMPCNTA-HHWYDQLAANSRA-EIIHIGDAVVAETRRSLERGRV 126
Query: 124 SILSTPATLRRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L+T TL + + + + + C I + + E E
Sbjct: 127 AVLATQGTLVSGFYQDRMSAAGFELCLPSNTEFQACVDSAISLVKAGSIVDAAV--ETER 184
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ D +L CT ++ + + +D++ ++AR L
Sbjct: 185 ALDIAQATGADAALLGCTELSVVAASLNDV--NGLVVIDSNAALARACLTRL 234
>gi|260550617|ref|ZP_05824826.1| hydantoin racemase [Acinetobacter sp. RUH2624]
gi|260406328|gb|EEW99811.1| hydantoin racemase [Acinetobacter sp. RUH2624]
Length = 244
Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 32/205 (15%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131
++ +IAC R S +G A + A+Y +G S+++T T
Sbjct: 65 EQLNVDAYIIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASYVSTG-FSVITTLQRT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ ++ +L H Y H + VEE I+ E + +E +
Sbjct: 121 VNMSW--HLAHRY--GAHPFCKNVRACDIAVEELELPNSDAYRTIRDECKKALVEDKS-- 174
Query: 192 TDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
D IVL C + + V +D + ++A +L ++N +++
Sbjct: 175 -DAIVLGC------AGMSDLCLKLQNELG--VIVIDGVAAAVKQAE-MLVQLNLKTSKIG 224
Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270
D + P ++ GFG++
Sbjct: 225 D-----WASPPVKNYTGILSGFGMR 244
>gi|56698073|ref|YP_168444.1| Asp/Glu/Hydantoin racemase family protein [Ruegeria pomeroyi DSS-3]
gi|56679810|gb|AAV96476.1| Asp/Glu/Hydantoin racemase family protein [Ruegeria pomeroyi DSS-3]
Length = 248
Score = 46.1 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 16/149 (10%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +VIA NT + +R M L A +A A T + +L T T
Sbjct: 81 LQGAGCDFAVIASNTP-HVRLHAIRKGV-DMTILSIFDATARATAETGATRALVLGTAVT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ ++ + ++ + ++ L E A + + + +
Sbjct: 139 MQARNYADALTAH----RVTANQTLPLEDIAEMQALIDEELNTGVSANARPRLLAYCDRH 194
Query: 192 TD---VIVLACTHYPLIVHVFRQLSPWPV 217
+ I+LACT PL + P V
Sbjct: 195 AEPGAAILLACTELPL-------IFPDHV 216
>gi|300819053|ref|ZP_07099256.1| aspartate racemase [Escherichia coli MS 107-1]
gi|301328463|ref|ZP_07221533.1| aspartate racemase [Escherichia coli MS 78-1]
gi|300528353|gb|EFK49415.1| aspartate racemase [Escherichia coli MS 107-1]
gi|300845127|gb|EFK72887.1| aspartate racemase [Escherichia coli MS 78-1]
Length = 229
Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 8/158 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VI CNTA EL+ + L + I +L+T AT
Sbjct: 61 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIIDTTVDEVRVCGKTRIGLLATDAT 118
Query: 132 LRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L I S + + + G ++ +E +
Sbjct: 119 LYMGLYQKGIESLGFNYITPDADGQKNVMKSIYSLKAGNVTHAQKLMEEQAENLFSR--- 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++++L CT P+I+ + + P+ ++D++ S+ R
Sbjct: 176 GAEILILGCTEIPIILS--QAVKDQPLRYIDSTASLVR 211
>gi|197251317|ref|YP_002149466.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197215020|gb|ACH52417.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 244
Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ +L+T ATL + + A ++ + +
Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 171 QALLLPQIDSLIARGAQTIIMGCT 194
>gi|197264432|ref|ZP_03164506.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197242687|gb|EDY25307.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
Length = 244
Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117
Query: 117 YTQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +L+T ATL Y + ++ ++ + G K
Sbjct: 118 -----HVGLLATNATLATGLYQKKALERGLTLIQPEEAGQALVMQAIYTLKRGDKTAAQA 172
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 173 L---LLPQIDSLIARGAQAIIMGCT 194
>gi|332363646|gb|EGJ41426.1| aspartate racemase [Streptococcus sanguinis SK49]
Length = 230
Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 51/138 (36%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ + L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADVAKRLEQAGADFIVICTNTMHKVA-PQIQEQI-TIPILHIAQATAQALLADGIQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + +I +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGIIEVNRIIYDELCLGNIKESSKQTYLA 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 180 VIDDLKKVGAEAVILGCT 197
>gi|115436938|ref|XP_001217683.1| hypothetical protein ATEG_09061 [Aspergillus terreus NIH2624]
gi|114188498|gb|EAU30198.1| hypothetical protein ATEG_09061 [Aspergillus terreus NIH2624]
Length = 600
Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 39/137 (28%), Gaps = 20/137 (14%)
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYV-SQCH 149
LR + +G + A A +++T A R + + +Y
Sbjct: 439 IRALREELTA-PVIGIMEASLYTARMV-GNRFGVVATSA--RSQVMHTDAVRNYGLEGFC 494
Query: 150 IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC----THYPLI 205
+ + S + +E G + K + E K D + L C T +
Sbjct: 495 VGVKSCGLGVLELEGKEEG------AVVKAMCRAARELVDKGADTLTLGCAGMTT----L 544
Query: 206 VHVFRQLSPWPVDWLDN 222
V +D
Sbjct: 545 KTAVETAVGKDVQVIDG 561
>gi|170683881|ref|YP_001743167.1| aspartate racemase [Escherichia coli SMS-3-5]
gi|301019514|ref|ZP_07183681.1| aspartate racemase [Escherichia coli MS 69-1]
gi|170521599|gb|ACB19777.1| aspartate racemase [Escherichia coli SMS-3-5]
gi|300399221|gb|EFJ82759.1| aspartate racemase [Escherichia coli MS 69-1]
Length = 239
Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 8/158 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VI CNTA EL+ + L + I +L+T AT
Sbjct: 71 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIIDTTVDEVRVCGKTRIGLLATDAT 128
Query: 132 LRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L I S + + + G ++ +E +
Sbjct: 129 LYMGLYQKGIESLGFNYITPDADGQKNVMKSIYSLKAGNVTHAQKLMEEQAENLFSR--- 185
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++++L CT P+I+ + + P+ ++D++ S+ R
Sbjct: 186 GAEILILGCTEIPIILS--QAVKDQPLRYIDSTASLVR 221
>gi|283782953|ref|YP_003373707.1| aspartate racemase [Gardnerella vaginalis 409-05]
gi|283441373|gb|ADB13839.1| aspartate racemase [Gardnerella vaginalis 409-05]
Length = 242
Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 20/162 (12%)
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPA 130
V+ CNTA D+ ++ + + GAV + + ++ I L T
Sbjct: 76 MGASFIVLTCNTA-HYFYDKFQA-LTDVPIIHMPRGAVAEVSKRYPKSKCNRIGFLGTAG 133
Query: 131 TLRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+ + I + + ++ V + + +
Sbjct: 134 SRKAGVYQRAIEEAGYTFVAPDDDLQKRITSLIYDDV---KGTGNLNLRRYESVLSDMLD 190
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226
R D ++L CT L V + P + +D + ++
Sbjct: 191 PAGTCRCDALILGCT--EL--SVLNEAFPLPQIPLVD-AQAV 227
>gi|269797360|ref|YP_003311260.1| aspartate racemase [Veillonella parvula DSM 2008]
gi|269093989|gb|ACZ23980.1| aspartate racemase [Veillonella parvula DSM 2008]
Length = 231
Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 45/214 (21%)
Query: 14 NSILIFDSGIGGLI---------VLQK-MRFLMPEYH----FIYVADDVGFPYGNWEDHA 59
+I + IGG+ VL + ++ ++ H +Y D
Sbjct: 2 KTIGL----IGGMSWESTITYYQVLNETIKQVLGGLHSAKCILYSVD----------FEE 47
Query: 60 LKK--------RLMFLFSDI---LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108
++K R + SD L+K VI NT + D++ + L
Sbjct: 48 IEKCQANGDWDRSAEILSDAAQSLEKAGADYIVICTNTMHKVA-DKI-ERHIHIPLLHI- 104
Query: 109 PAIKQAAAYTQSG--LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166
A A +SG + +L T T+++ + ++ + I + L + +
Sbjct: 105 -AEMTAVELEKSGITKVGLLGTKYTMQQDFYKCILENRGIHVVIPNEDQVELVNSIIYNE 163
Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ + +E K++ + ++L CT
Sbjct: 164 LCLGVISNESKQQYLDIIGDLVKSGVQGVILGCT 197
>gi|228923509|ref|ZP_04086791.1| amino-acid racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228836147|gb|EEM81506.1| amino-acid racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 235
Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V QA
Sbjct: 68 EAMKKAIIEGAQK-LESTGASFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQAIPK 124
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +++L+T AT++ + I I + + + + IK E E
Sbjct: 125 N-TKRVALLATEATIQAGIYQDGIAKRN----IEYIYYEKWQTMINQIITYIKSGEVEEA 179
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + ++ACT
Sbjct: 180 RKLWSALVVQLKDEVATAIIACT 202
>gi|332995767|gb|AEF05822.1| hypothetical protein ambt_21665 [Alteromonas sp. SN2]
Length = 230
Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 5/102 (4%)
Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILAS 160
+ L A A + +L T T+ + + L + + ++
Sbjct: 99 IPLLHIADATGVALCENAVKKVGLLGTQFTMEQAFYSERLAQQFDLDVVVPNSDDRLVVH 158
Query: 161 RV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
++ EE G+ ++ + + + + ++L CT
Sbjct: 159 KIIYEELCKGVICEKS--RDAYIDIINKLKAQGAQAVILGCT 198
>gi|32265574|ref|NP_859606.1| aspartate racemase [Helicobacter hepaticus ATCC 51449]
gi|32261622|gb|AAP76672.1| aspartate racemase [Helicobacter hepaticus ATCC 51449]
Length = 241
Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 50/153 (32%), Gaps = 11/153 (7%)
Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
+ K + + L + + CNTA + +++ P + L + +
Sbjct: 64 KGEDFTKDYID--IAKRLQNFGAQTLCMCCNTA-HYSFETIKAALPQVKMLNLIESAVLK 120
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE- 173
+ + + ++++ L+ + I + +V + C IK
Sbjct: 121 VKQSGAKSVGLVASDGCLKGRVYERYFEKICPEVKIIY-PNAEFQKKVTQGICNIKNAHR 179
Query: 174 -DEIKKEIEGCFI-----EKEGKRTDVIVLACT 200
D + + I E D+I+L CT
Sbjct: 180 FDTMDSKARPKNIFKQVCEHLLGGGDIILLGCT 212
>gi|218513623|ref|ZP_03510463.1| probable aspartate racemase protein [Rhizobium etli 8C-3]
Length = 289
Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 18/181 (9%)
Query: 24 GGLIVLQKMRFLMPEYHFIYV---ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
GGL + + + + + D G +RL + +
Sbjct: 73 GGLASAEIILHSVNFEEIVALQKAGDWAGA----------ARRLGDAAERLQAAGAGCIL 122
Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
+ C NT LI DE+ + S+ + + ++ +L+T T+ +
Sbjct: 123 I--CTNTM-HLIADEVAAKV-SVPLIHIIDETAKSLQAAGRKRPLLLATRYTMEHGFYGE 178
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ S + + + D ++++ D I+L C
Sbjct: 179 RMKSLGLDIMVPEAADRTTVHDIIFNELCAGRVHDRSREKLIDIIDRAVENGADSIILGC 238
Query: 200 T 200
T
Sbjct: 239 T 239
>gi|326387882|ref|ZP_08209488.1| aspartate racemase [Novosphingobium nitrogenifigens DSM 19370]
gi|326207928|gb|EGD58739.1| aspartate racemase [Novosphingobium nitrogenifigens DSM 19370]
Length = 230
Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 45/147 (30%), Gaps = 10/147 (6%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
AL R++ + L + C NT +L + ++ L A
Sbjct: 58 DALASRMVDAARRLETAGAEALLI--CTNTM--HRCADLIAANVAVPLLHIADPTGAAVR 113
Query: 117 YTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKE 173
+ +L T T+ + + L + + + + RV EE G
Sbjct: 114 AAGIERVGLLGTRFTMEQAFYRERLAERHGLDVIVPEDADRQIVHRVIYEELVAGRIEPR 173
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACT 200
++ G + I+L CT
Sbjct: 174 S--REAYRGALARLAERGAQGIILGCT 198
>gi|229087301|ref|ZP_04219443.1| amino-acid racemase [Bacillus cereus Rock3-44]
gi|228696003|gb|EEL48846.1| amino-acid racemase [Bacillus cereus Rock3-44]
Length = 227
Score = 45.7 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 66/169 (39%), Gaps = 11/169 (6%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + + L+ + CNTA L D+L+++ +K+
Sbjct: 60 EQAIITGAQKLESTGVDFIAMPCNTA-HLYFDQLQNSVSVPVLNMVDETLKEI--PNHIK 116
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++L+T AT++ + I +IH S + + + IK E+
Sbjct: 117 RVALLATDATIQSGIYQDGIAKRDMD-YIHKNS---WQTTITQIISNIKTGNINKANELW 172
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + D +++ACT ++V +P+ +D+S +A+
Sbjct: 173 YTLCTELSEAVDAVIVACT----DLNVLSNTAPYNYYLVDSSTCLAQAV 217
>gi|332296817|ref|YP_004438739.1| aspartate racemase [Treponema brennaborense DSM 12168]
gi|332179920|gb|AEE15608.1| aspartate racemase [Treponema brennaborense DSM 12168]
Length = 230
Score = 45.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 44/143 (30%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+ ++L L K ++ NT ++ ++S ++ + A +A
Sbjct: 58 QTITEKLTEAALT-LQKGGADFILVGTNTMHKVV-PHVQSRV-AVPIIHIADATAEAIKV 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+L T T+ + + I + + RV + + K
Sbjct: 115 RNLTTAGLLGTRFTMSQDFIKTRIAQRGIGVVVPDGTDSAYIDRVIFDELCRGVVSRQSK 174
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+ + D ++L CT
Sbjct: 175 NGYLAIIDKLAAQGADCVILGCT 197
>gi|23100846|ref|NP_694313.1| amino acid racemase [Oceanobacillus iheyensis HTE831]
gi|22779080|dbj|BAC15347.1| amino acid racemase [Oceanobacillus iheyensis HTE831]
Length = 231
Score = 45.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 43/132 (32%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K +I NT ++D S+ L A T I +L T T
Sbjct: 71 LEKAGADFIIICTNTMHKTVEDI--EKAISIPILHIADATATKIKSTNINTIGLLGTTYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSM---ILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
++ + N I S ++ + S L + E C I E K
Sbjct: 129 MQHDFYKNRIKM--SGINVIIPDSDDINKLNKIIFEELCLGIINEQS-KAYYISVINNLM 185
Query: 189 GKRTDVIVLACT 200
+ + I+ CT
Sbjct: 186 NRGAEGIIFGCT 197
>gi|312866048|ref|ZP_07726269.1| Asp/Glu/Hydantoin racemase [Streptococcus downei F0415]
gi|311098452|gb|EFQ56675.1| Asp/Glu/Hydantoin racemase [Streptococcus downei F0415]
Length = 136
Score = 45.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 37/105 (35%), Gaps = 10/105 (9%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160
++ + A +A G +++L T T+++ + + + + L+
Sbjct: 3 NIPLVHIADATAEALEEDNIGTVALLGTRYTMKQNFYKQKL--FDRGLTV-LIPEDEQVE 59
Query: 161 RV-----EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
V EE G + ++ + + K ++L CT
Sbjct: 60 EVNRIIFEELCLGAIKDDS--RQYFAKVINQLKVKGAQAVILGCT 102
>gi|229172921|ref|ZP_04300474.1| hypothetical protein bcere0006_20280 [Bacillus cereus MM3]
gi|228610544|gb|EEK67813.1| hypothetical protein bcere0006_20280 [Bacillus cereus MM3]
Length = 237
Score = 45.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 10/141 (7%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + +I NT ++ ++++ + L A + +
Sbjct: 68 VLGNAAYSLQRGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTV 125
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY----ACGIKIKEDEIKKE 179
+L T T+ + + + I + + V S ++ E C KI ++
Sbjct: 126 GLLGTKYTMEQDFYKSRIEE--NDIKVI-VPSEKNREKINEVIYTELCLGKITSQS-REY 181
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
+ E + I+L CT
Sbjct: 182 YKRVIEELVQEGAQGIILGCT 202
>gi|295426126|ref|ZP_06818793.1| aspartate racemase [Lactobacillus amylolyticus DSM 11664]
gi|295064162|gb|EFG55103.1| aspartate racemase [Lactobacillus amylolyticus DSM 11664]
Length = 249
Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 50/132 (37%), Gaps = 9/132 (6%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPA 130
K P V+ CNTA ++L + + FL + K Y + I +++T
Sbjct: 73 AKLNPDFFVMPCNTA-HYFYNDL-AALTDIPFLHMMRIAVHKFIEEYPKESKIGLIATEG 130
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--E 188
++ + IH + + V + ++ ++ ++ ++K +
Sbjct: 131 SIYDHLYEDEIHRVRREVE---FGGPEIQPMVTKLIYRDIKEKGIVEGKLYHQILQKMHD 187
Query: 189 GKRTDVIVLACT 200
+VI+L CT
Sbjct: 188 DYGCNVILLGCT 199
>gi|293609488|ref|ZP_06691790.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827940|gb|EFF86303.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 229
Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 4/130 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K ++ NT + S+ FL A + G +++L T T
Sbjct: 71 LEKAGADCILVCTNTMHKIAAQI--EDSISIPFLHIADATAKEILSQNIGKVALLGTAFT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + + Y I + + S + E C I D +K I +
Sbjct: 129 MEQDFYKARLRDYGIDVVIPNEADRKIVHSIIYEELCLGVINPDSQQKYIA-IVERLIAE 187
Query: 191 RTDVIVLACT 200
I+L CT
Sbjct: 188 GAQGIILGCT 197
>gi|228952564|ref|ZP_04114640.1| hypothetical protein bthur0006_19620 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228807030|gb|EEM53573.1| hypothetical protein bthur0006_19620 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 231
Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKEIKRKDIQKVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + I + + + ++V E G + + ++ + E
Sbjct: 129 MEQDFYKSRIEENNIKVIVPSEKNRKEINKVIYTELCLGKIVSQS--REYYKRGIEELVQ 186
Query: 190 KRTDVIVLACT 200
K I+L CT
Sbjct: 187 KGAQGIILGCT 197
>gi|327488703|gb|EGF20503.1| aspartate racemase [Streptococcus sanguinis SK1058]
Length = 230
Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 49/138 (35%), Gaps = 2/138 (1%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+L+ + L++ VI NT + +++ ++ L A QA
Sbjct: 62 QLLADVAKRLEQAGADFIVICTNTMHKVA-PQIQEQI-AIPILHIAQATAQALLADGIQK 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + I + + +R+ + ++ K+
Sbjct: 120 VGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEVNRIIYDELCLGDIKESSKQTYLT 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 180 IIDGLKKAGAEAVILGCT 197
>gi|86748272|ref|YP_484768.1| aspartate racemase [Rhodopseudomonas palustris HaA2]
gi|86571300|gb|ABD05857.1| aspartate racemase [Rhodopseudomonas palustris HaA2]
Length = 241
Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 42/149 (28%), Gaps = 6/149 (4%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+W+ R++ + L +I NT + + + L +
Sbjct: 56 GDWDGAT---RVLQKIARELQAAGADCVLICTNTM--HKLADAVQSAIDIPLLNIIDICA 110
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKI 171
Q + +L+T T+ + + + + V I
Sbjct: 111 QELKQAGARKPLLLATRYTMEHDFYRERMRRRHGIETLVPEADDRSAVHDVIFTELCCGI 170
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
D ++ + D ++L CT
Sbjct: 171 IRDASRQRYMEIIAKGRAAGADSVILGCT 199
>gi|19910930|dbj|BAB87718.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 45.3 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 20/76 (26%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI + + D+I + + F
Sbjct: 1 GCTHFPLIAQKIESCFMEHFALSTPPLLIHSGDAIVKYLQQ--KYALKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVVWLEKQAKEWL 74
>gi|325570019|ref|ZP_08145944.1| aspartate racemase [Enterococcus casseliflavus ATCC 12755]
gi|325156847|gb|EGC69018.1| aspartate racemase [Enterococcus casseliflavus ATCC 12755]
Length = 236
Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 8/138 (5%)
Query: 67 LFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
L DI + +P V+ CNTA DEL++ A K +G ++
Sbjct: 65 LMDDIEKQNLLKPNFIVLTCNTA-HYFFDELQAATEIEILHMPREAAKVVFEKGVTGKVA 123
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
L T +++ + + + + +V + D + +E+
Sbjct: 124 FLGTEGSVKAGIYEKELRQLGLDVY---LPEPAIQKKVNTLIYDRIKENDHLDQELYFEI 180
Query: 185 IEKEGKRT--DVIVLACT 200
+E+ +R + +VL CT
Sbjct: 181 LEEVTERIGCESVVLGCT 198
>gi|319780912|ref|YP_004140388.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166800|gb|ADV10338.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 231
Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 6/119 (5%)
Query: 85 NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHS 143
NT L D+++++ S+ + A A ++L+T T+ + + L
Sbjct: 84 NTMHKLA-DQVQASV-SIPLIHIADATAVAVKRAGMQRPALLATRFTMEQDFYKGRLADR 141
Query: 144 YVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ + + + RV EE C + E I + + D +++ CT
Sbjct: 142 FGLDPVVPDAAGRDMVHRVIYEE-LCQGIVTETSKAAYIAETERLRREEAADSVIMGCT 199
>gi|170765513|ref|ZP_02900324.1| aspartate racemase [Escherichia albertii TW07627]
gi|170124659|gb|EDS93590.1| aspartate racemase [Escherichia albertii TW07627]
Length = 239
Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 39/130 (30%), Gaps = 6/130 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VI CNTA EL+ + L V I +L+T AT
Sbjct: 71 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIVETTINEVRDCGKTRIGLLATNAT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L I S C S + G ++ E +
Sbjct: 129 LYMGLYQKGIESLGLTCIRPDADSQKKVMESIYSLKAGDMTHAQQLMSEQAEILFSR--- 185
Query: 191 RTDVIVLACT 200
+V+VL CT
Sbjct: 186 GAEVLVLGCT 195
>gi|62182935|ref|YP_219352.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161617810|ref|YP_001591776.1| hypothetical protein SPAB_05674 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168464587|ref|ZP_02698490.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194442279|ref|YP_002043753.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|198244578|ref|YP_002218382.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|200389289|ref|ZP_03215901.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|224586336|ref|YP_002640135.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|62130568|gb|AAX68271.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161367174|gb|ABX70942.1| hypothetical protein SPAB_05674 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194400942|gb|ACF61164.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|195632992|gb|EDX51446.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197939094|gb|ACH76427.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199606387|gb|EDZ04932.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|224470864|gb|ACN48694.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322717439|gb|EFZ09010.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|326626189|gb|EGE32534.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 244
Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117
Query: 117 YTQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +L+T ATL Y + ++ ++ + G K
Sbjct: 118 -----HVGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRGDKTAAQA 172
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 173 L---LLPQIDSLIARGAQAIIMGCT 194
>gi|331005285|ref|ZP_08328675.1| aspartate racemase [gamma proteobacterium IMCC1989]
gi|330420895|gb|EGG95171.1| aspartate racemase [gamma proteobacterium IMCC1989]
Length = 231
Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 44/140 (31%), Gaps = 3/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + +++ +I NT + S+ L A +
Sbjct: 61 AAILADAAQKIERAGADFLLICTNTMHKVAPQI--ENAISIPILHIADATAETLVEKGIK 118
Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L T T+ + + L Y + H + + V + +++ K E
Sbjct: 119 NVGLLGTAFTMEQDFYKGRLSEKYGLKVHTPNEADRAIVHNVIYQELCLGQVKEKSKLEY 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 179 LRIIAALAEQGAEAVILGCT 198
>gi|225023584|ref|ZP_03712776.1| hypothetical protein EIKCOROL_00443 [Eikenella corrodens ATCC
23834]
gi|224943679|gb|EEG24888.1| hypothetical protein EIKCOROL_00443 [Eikenella corrodens ATCC
23834]
Length = 235
Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 46/138 (33%), Gaps = 4/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L++ ++A NT + + FL + ++ + +
Sbjct: 63 ILAQAARTLEQAGADAVLLATNTMHKVAAPI--QAVIGVPFLHILDSVAERIRAQGIRTV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T++ + + + Q + + + E C E+ + ++
Sbjct: 121 GLLGTRFTMQDAFYREGLAARGIQAIVPDECVQAEIHRIIFEELCVGNFTENSRRFYVQA 180
Query: 183 CFIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 181 -IERLAAQGAQGIILGCT 197
>gi|332524847|ref|ZP_08401038.1| aspartate racemase [Rubrivivax benzoatilyticus JA2]
gi|332108147|gb|EGJ09371.1| aspartate racemase [Rubrivivax benzoatilyticus JA2]
Length = 238
Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 40/128 (31%), Gaps = 2/128 (1%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+I NT + + P L A +++L T T+ + +
Sbjct: 77 DCLLICTNTMHKIAAQVAGESLP--PLLHIADVTGAAIRARGLRRVALLGTRYTMEQPFY 134
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + +C + R+ +++++ + + +VL
Sbjct: 135 AEHLARLGVECIVPPEDERAEVHRIIFDELCRGQVLPASRQKLQLIVAALAARGAEGVVL 194
Query: 198 ACTHYPLI 205
CT PLI
Sbjct: 195 GCTELPLI 202
>gi|52424069|ref|YP_087206.1| RacX protein [Mannheimia succiniciproducens MBEL55E]
gi|52306121|gb|AAU36621.1| RacX protein [Mannheimia succiniciproducens MBEL55E]
Length = 252
Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 4/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + +L++ ++A NT + + + + S+ FL + A+ + +
Sbjct: 85 ILAEQAKLLEQAGADGILLATNTMHKVARPIIDN--ISVPFLHILDAVADSIKAKGLNKV 142
Query: 124 SILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + LI ++ + + + E C KI + K
Sbjct: 143 ALLGTAFTMSDNFYRDGLIERGITPVVPDEETQKEIHRIIFEELCIGKI-LPQSKTFYLK 201
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 202 TIEKLTALGAEGVILGCT 219
>gi|328480175|gb|EGF49117.1| aspartate racemase [Lactobacillus rhamnosus MTCC 5462]
Length = 141
Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T T++ S+ I + + + L V E ++ E+ E+
Sbjct: 13 RIGLIATQGTIKDGIYSHEIE--NTGRKVI-LGDQALQDMVTELIYKYVKEKGEVNAELY 69
Query: 182 GCFIEK--EGKRTDVIVLACT 200
+++ + + +VIVL CT
Sbjct: 70 HRILKRMHDDFQVNVIVLGCT 90
>gi|241762008|ref|ZP_04760092.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241373474|gb|EER63061.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 232
Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 57/155 (36%), Gaps = 8/155 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIA--CNTAFTLIKDELRSTFPSMAFLGAVPAI 111
+ + L LM ++++ VIA NT ++ D+L+ + + V A
Sbjct: 54 DKDYTKLTTYLMHGVNNLIAAGAD---VIALTGNTP-HIVFDDLQKQ-SDVPLISIVEAT 108
Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ +L T T+ + LI + +S +A++++
Sbjct: 109 CDEVKRQNITKVGLLGTRFTMEADFFKKPLIANGMSVITPQPKEIDYIANKIDSELEKGI 168
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
++ + + I ++ I+L CT PL+
Sbjct: 169 FSQNTLSEFISIISRMRDSDGIKAIILGCTELPLL 203
>gi|296114812|ref|ZP_06833461.1| aspartate racemase [Gluconacetobacter hansenii ATCC 23769]
gi|295978626|gb|EFG85355.1| aspartate racemase [Gluconacetobacter hansenii ATCC 23769]
Length = 232
Score = 45.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 84 CNTAF------TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
CN ++ D LR+ S+ + + A ++ A + +L T T+ +
Sbjct: 76 CNIISLTGNTPHIVFDTLRTK-SSVPLVSIIEATQKEAKKLGYKKVGLLGTRFTMEEDFF 134
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-----RT 192
+ + +++ IK+E + F++
Sbjct: 135 KKPFQEEKIEIFSPQGEDLDFV----ADKISHELEHGIIKEETKCGFLKVIENMIHTYDI 190
Query: 193 DVIVLACTHYPLI 205
+ I+L CT PLI
Sbjct: 191 EAIILGCTELPLI 203
>gi|317484405|ref|ZP_07943320.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
gi|316924324|gb|EFV45495.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
Length = 255
Score = 45.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 19/154 (12%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + + + V+ V CNTA + + L P F+ + ++
Sbjct: 67 EAIGEIMVRMAKAGATVIGV-PCNTAHSPRIMDVAVAMLHEASPKTRFVHMIDSVVAFIR 125
Query: 117 YT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY----ACGIK 170
+ + I +LST T + + + + L RV++ A GIK
Sbjct: 126 ESLPHARKIGVLSTKGTYATGLYQDALSAAG---FVPLFPDEEGRERVQQAISNTAYGIK 182
Query: 171 IKEDEIKKEIEGCFI----EKEGKRTDVIVLACT 200
+ + + E + + + D ++L CT
Sbjct: 183 AQSNPVTPEARAALLAEAEKLVEQGADAVILGCT 216
>gi|323526636|ref|YP_004228789.1| aspartate racemase [Burkholderia sp. CCGE1001]
gi|323383638|gb|ADX55729.1| aspartate racemase [Burkholderia sp. CCGE1001]
Length = 232
Score = 45.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 45/134 (33%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ L ++A NT + + + + FL A + +L
Sbjct: 67 AARQLERGGAELVMLATNTM-HRVYESI-ERAIHVPFLHIADPTGSALRKAGVERVGLLG 124
Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ +T YT L Y + + + R+ + E + +
Sbjct: 125 TRYTMEQTFYTGRLRERYGLETLVPDEAQRADVHRIIYDELCHGNVKSESRMVYQTVIES 184
Query: 187 KEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 185 LRARGAEAVILGCT 198
>gi|325122763|gb|ADY82286.1| aspartate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 250
Score = 45.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 7/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
L ++ + V C NT + ++ FL A +
Sbjct: 62 AYLAEQAQNLEKAGANCILV--CTNTMHKVAAQI--EDSITVPFLHIADATAKEILSQNI 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179
G +++L T T+ + + + Y I + + S + E C I D +K
Sbjct: 118 GKVALLGTAFTMEQDFYKARLQDYGIDVVIPNEADRKIVHSIIYEELCLGVINPDSQQKY 177
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
I + I+L CT
Sbjct: 178 IA-IVERLIAEGAQGIILGCT 197
>gi|121611642|ref|YP_999449.1| aspartate racemase [Verminephrobacter eiseniae EF01-2]
gi|121556282|gb|ABM60431.1| aspartate racemase [Verminephrobacter eiseniae EF01-2]
Length = 246
Score = 45.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 25/141 (17%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L IACNTA L+ FP + L Q+ A + +++++T
Sbjct: 84 LAALGSRAVAIACNTA--HAWHANLQERFPQVELLHIARETAQSLAAQGATEVALMATEG 141
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-----------E 179
T R + CH+ +E ++ D +K E
Sbjct: 142 TYRVRLYEQALAEAGLGCHV---------PLADERQTIMRGIFDGVKAGNMPLAGQCFSE 192
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
+ E+ G I++ CT
Sbjct: 193 VALRLAERHGSV--TIIMGCT 211
>gi|49477550|ref|YP_036336.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|196039710|ref|ZP_03107014.1| aspartate racemase family protein [Bacillus cereus NVH0597-99]
gi|218903367|ref|YP_002451201.1| aspartate racemase family protein [Bacillus cereus AH820]
gi|228914826|ref|ZP_04078435.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228933529|ref|ZP_04096380.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|49329106|gb|AAT59752.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|196029413|gb|EDX68016.1| aspartate racemase family protein [Bacillus cereus NVH0597-99]
gi|218534989|gb|ACK87387.1| aspartate racemase family protein [Bacillus cereus AH820]
gi|228826127|gb|EEM71909.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228845145|gb|EEM90187.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 232
Score = 44.9 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + + V E I + E K + I++
Sbjct: 129 MEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188
Query: 189 GKRTDVIVLACT 200
K +L CT
Sbjct: 189 AKGI---ILGCT 197
>gi|294102242|ref|YP_003554100.1| aspartate racemase [Aminobacterium colombiense DSM 12261]
gi|293617222|gb|ADE57376.1| aspartate racemase [Aminobacterium colombiense DSM 12261]
Length = 228
Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 50/237 (21%)
Query: 12 LQNSILIFDSGIGGLI------VLQKMRFLM---------PE-----YHFIYVADDVGFP 51
++ SI I +GG+ + + L PE F Y D
Sbjct: 1 MKKSIGI----LGGISLASTIQYYKTITDLYYERNKDYYYPEMVIKSLDFQYFTDLEN-- 54
Query: 52 YGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI 111
++ L+ +++A N+ ++ D++
Sbjct: 55 --ERRTEEYIDYIVKGI-KSLESAGADFAIMAANSPHSV-FDKVVEKVELPIISIVETTA 110
Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV------SQCHIHLVSSMILASRVEEY 165
K+A + + T++ + + + Y ++ H ++S+I V
Sbjct: 111 KKAVELN-LKKVLLTGIKYTMQGRFYQDGLEKYDIEVITPTENHQDEINSIIFQELV--I 167
Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+ + + I + ++L CT PL+++ ++ + LD
Sbjct: 168 NRFSEKTRSRMLEIISSY-------NVEGVILGCTELPLLLN--QEH--SHLKLLDT 213
>gi|229091216|ref|ZP_04222436.1| Aspartate racemase [Bacillus cereus Rock3-42]
gi|228692114|gb|EEL45853.1| Aspartate racemase [Bacillus cereus Rock3-42]
Length = 232
Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + + V E I + E K + I++
Sbjct: 129 MEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188
Query: 189 GKRTDVIVLACT 200
K +L CT
Sbjct: 189 AKGI---ILGCT 197
>gi|153007895|ref|YP_001369110.1| aspartate racemase [Ochrobactrum anthropi ATCC 49188]
gi|151559783|gb|ABS13281.1| aspartate racemase [Ochrobactrum anthropi ATCC 49188]
Length = 230
Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 42/139 (30%), Gaps = 3/139 (2%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
RLM + L+K +I NT + D S+ + +
Sbjct: 62 RLMIEAAQNLEKGGADFILICTNTMHKMAADV--ENATSIPLVHIADPTAEKIKAAGLSK 119
Query: 123 ISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T+ + + L+ + + + + + D +++
Sbjct: 120 VGLLGTAFTMEQDFYKGRLVAKHGLEVLTPDDADRKTVHDIIYQELVVGEIRDASREKYR 179
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 180 AVINRLVERGARAIILGCT 198
>gi|149180603|ref|ZP_01859107.1| aspartate racemase [Bacillus sp. SG-1]
gi|148851756|gb|EDL65902.1| aspartate racemase [Bacillus sp. SG-1]
Length = 231
Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 14/135 (10%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K ++ NT +I +L S S+ L A + +L T T
Sbjct: 71 LEKAGADFIILCTNTMHKVI--DLISEHISIPVLHIADAAAVHIRSQGIKSVGLLGTRYT 128
Query: 132 LRRTYTSNLIHSYVSQCHI------HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+ + + + + + ++++I G E ++ ++
Sbjct: 129 MEQDFYKERLRMNGIEVVVPDGKEREKINTIIFDELCVGRIEG------ESREYMKDIIE 182
Query: 186 EKEGKRTDVIVLACT 200
+ K + IVL CT
Sbjct: 183 SLQTKGAEGIVLGCT 197
>gi|331655439|ref|ZP_08356434.1| aspartate racemase subfamily [Escherichia coli M718]
gi|331046871|gb|EGI18953.1| aspartate racemase subfamily [Escherichia coli M718]
Length = 239
Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 8/158 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VI CNTA EL+ + L + I +L+T AT
Sbjct: 71 LEDAGAECIVIPCNTA-HYWFTELKDAC-HIDILSIIDTTVDEVRVCGKTRIGLLATDAT 128
Query: 132 LRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L I S + + + G ++ +E +
Sbjct: 129 LYMGLYQKGIESLGFNYITPDADGQKNVMKSIYSLKAGNVTHAQKLMEEQAENLFSR--- 185
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++++L CT P+I+ + + P+ ++D++ S+ R
Sbjct: 186 GAEILILGCTEIPIILS--QAVKDQPLRYIDSTASLVR 221
>gi|171742533|ref|ZP_02918340.1| hypothetical protein BIFDEN_01646 [Bifidobacterium dentium ATCC
27678]
gi|283456381|ref|YP_003360945.1| aspartate racemase [Bifidobacterium dentium Bd1]
gi|306822446|ref|ZP_07455824.1| aspartate racemase [Bifidobacterium dentium ATCC 27679]
gi|309802470|ref|ZP_07696576.1| aspartate racemase [Bifidobacterium dentium JCVIHMP022]
gi|171278147|gb|EDT45808.1| hypothetical protein BIFDEN_01646 [Bifidobacterium dentium ATCC
27678]
gi|283103015|gb|ADB10121.1| aspartate racemase [Bifidobacterium dentium Bd1]
gi|304553991|gb|EFM41900.1| aspartate racemase [Bifidobacterium dentium ATCC 27679]
gi|308220870|gb|EFO77176.1| aspartate racemase [Bifidobacterium dentium JCVIHMP022]
Length = 240
Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 57/174 (32%), Gaps = 25/174 (14%)
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPA 130
V+ CNTA D+ + + L GAV + Q + I L T
Sbjct: 76 MGASFIVLTCNTA-HYFYDDFQ-RLTPVPILHMPRGAVNRMAQRYPKERFPRIGFLGTSG 133
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRV-----EEYACGIKIKEDEIKKEIEGCFI 185
+ + + + + + L R+ ++ ++ ++ + +
Sbjct: 134 SRKSGVYARA-ATEAGYAFVE--PTDDLQERITSLIYDDVKGSGELNQERYESVLRDMLD 190
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI-----ARRARCL 233
D ++L CT L V + P + +D + ++ RA+ L
Sbjct: 191 PAGPCACDALILGCT--EL--SVLNEAFPMPQLPIID-AQAVLVEDTVARAKSL 239
>gi|225864203|ref|YP_002749581.1| aspartate racemase family protein [Bacillus cereus 03BB102]
gi|225788860|gb|ACO29077.1| aspartate racemase family protein [Bacillus cereus 03BB102]
Length = 232
Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + + V E I + E K + I++
Sbjct: 129 MEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188
Query: 189 GKRTDVIVLACT 200
K +L CT
Sbjct: 189 AKGI---ILGCT 197
>gi|254460741|ref|ZP_05074157.1| hydantoin racemase [Rhodobacterales bacterium HTCC2083]
gi|206677330|gb|EDZ41817.1| hydantoin racemase [Rhodobacteraceae bacterium HTCC2083]
Length = 227
Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 19/176 (10%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH---ALKKRLMFLFSDILDKYQPVLSVIA 83
V + + P+ I G + + L ++ VIA
Sbjct: 20 TVARAVAR--PDTEII----AASSHDGPASIQGFLDVATCVPELLKEVAQHKDVDAIVIA 73
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS 143
C D +R T S+ LG A AA+ + S+++T + +NL+
Sbjct: 74 C--FDDTGLDAVR-TLMSVPVLGIGEAAYHAASMIANK-FSVITTLSRSVPGLENNLMRY 129
Query: 144 YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
++Q + ++ I ++EE G D+I+ I + + IVL C
Sbjct: 130 GLAQKCSRVRATEIPVLKLEE---GDPATLDKIRSAIRASI---DEDNAEAIVLGC 179
>gi|221133453|ref|ZP_03559758.1| hypothetical protein GHTCC_00865 [Glaciecola sp. HTCC2999]
Length = 230
Score = 44.9 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 7/132 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VI NT L D ++ L A QA + +L T T
Sbjct: 71 LAQAGADSIVICTNTMHKLAPDIAAQV--NIPLLHIADATGQALVEQGIKQVGLLGTRFT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + L++ Y + + ++ EE G + + + +
Sbjct: 129 MEQDFYASRLLNKYGIEVITPDQTGRDAVHQIIYEELCLGHIHTQS--RSIYQHVVAKLA 186
Query: 189 GKRTDVIVLACT 200
+ ++L CT
Sbjct: 187 DQGAQAVILGCT 198
>gi|302384307|ref|YP_003820130.1| aspartate racemase [Brevundimonas subvibrioides ATCC 15264]
gi|302194935|gb|ADL02507.1| aspartate racemase [Brevundimonas subvibrioides ATCC 15264]
Length = 223
Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 24/155 (15%)
Query: 81 VIA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
V+A CNTA + + + F+ + A A + + IL+TP
Sbjct: 74 VLAMPCNTAHAQKAGIVAA---GLPFIDMIAATVAAVGGHDARAVGILATPG--GEALYR 128
Query: 139 NLIHSYVSQCHIHLV------SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ + M V+ G + E+
Sbjct: 129 PALE--AEGIKPVLLQGGDREAFMACVYGVKRGDTG-----AANRAEMARLAQALTVAGA 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
D I+ CT PL++ S V +D+++ +A
Sbjct: 182 DAIIAGCTEVPLLLD----ASDVSVPLVDSAEVLA 212
>gi|10121332|gb|AAG13132.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI + + D+I + F
Sbjct: 1 GCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVIWLEKQAKEWL 74
>gi|299530163|ref|ZP_07043589.1| aspartate racemase [Comamonas testosteroni S44]
gi|298721820|gb|EFI62751.1| aspartate racemase [Comamonas testosteroni S44]
Length = 235
Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%)
Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
E L ++ L + + NT ++ L + + A+ A A
Sbjct: 59 REFDQLADYVLGAIH-CLAAGGADMVGLTGNTPNIVLDRILP--LSPIPIVSAIDATCNA 115
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR----VEEYACGIK 170
A + + +L T T+ T+ + V +R +E
Sbjct: 116 AKERGAQRVGLLGTVFTMTNTFFKTPFE--DRGIQVI-VPCEHQIARIQAKIEAELEHGL 172
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
+KE+ ++ + ++ + D + LACT PLI
Sbjct: 173 VKENTRQEFVAIIQDLQQREGIDHVALACTELPLI 207
>gi|289665269|ref|ZP_06486850.1| putative racemase [Xanthomonas campestris pv. vasculorum NCPPB702]
gi|289668900|ref|ZP_06489975.1| putative racemase [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 234
Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 2/123 (1%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ NT + D + S P + L A + +L T T+ + +
Sbjct: 81 DFIVLCTNTMHCVA-DAITSATP-LPLLHIADVTADALVAAGINRVGLLGTRFTMEQPFY 138
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + RV + + E + + + I+L
Sbjct: 139 RARLQPRGLDVLVPPADAREELHRVIYNELCQGVIKPESRAYVRQVMADLGQHGAQAIIL 198
Query: 198 ACT 200
CT
Sbjct: 199 GCT 201
>gi|205355237|ref|YP_002229038.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205275018|emb|CAR40102.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326630400|gb|EGE36743.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 240
Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 58 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 113
Query: 117 YTQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +L+T ATL Y + ++ ++ + G K
Sbjct: 114 -----HVGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRGDKTVAQA 168
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 169 L---LLPQIDSLIARGAQAIIMGCT 190
>gi|319901947|ref|YP_004161675.1| aspartate racemase [Bacteroides helcogenes P 36-108]
gi|319416978|gb|ADV44089.1| aspartate racemase [Bacteroides helcogenes P 36-108]
Length = 239
Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 55/183 (30%), Gaps = 29/183 (15%)
Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
+ + + L K + CNTA DEL + F+ + + +
Sbjct: 56 KGESFISDYVN--IGKKLKKMGCTELCMCCNTA-HYAIDELSQK-TDLPFINIIDEVARR 111
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK---- 170
+ ++ T + Y S + + + V + C K
Sbjct: 112 SDEMGIKKALVMCTAGLRKYKLYERSFEKYASSTEVVY-PNDEIQEWVTKGICNAKNIYR 170
Query: 171 --IKEDEIK------KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDW 219
+E E++ +++ +I D I+ CT + V++
Sbjct: 171 FANRETEVEHPANWFQKVCDYYI--NTSDIDCIIGGCT-------DISNVFQLNSSKVEY 221
Query: 220 LDN 222
+D+
Sbjct: 222 IDS 224
>gi|19910928|dbj|BAB87716.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 44.9 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI + + D+I + F
Sbjct: 1 GCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPKVEFR 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVVWLEKQAKEWL 74
>gi|91784270|ref|YP_559476.1| aspartate racemase [Burkholderia xenovorans LB400]
gi|91688224|gb|ABE31424.1| Aspartate racemase [Burkholderia xenovorans LB400]
Length = 232
Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 3/139 (2%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R M + L++ L ++A NT + + + + + FL A
Sbjct: 62 RQMADAARQLERGGADLVMLATNTM-HRVYESIEAAI-DVPFLHIADPTGNALRAAGVER 119
Query: 123 ISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L T T+ +T YT L Y + + R+ + +
Sbjct: 120 VGLLGTRYTMEQTFYTGRLRERYGLTTLVPDEAERADVHRIIYDELCHGKVNGASRAVYQ 179
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 180 RVIEALAARGAQAVILGCT 198
>gi|157375863|ref|YP_001474463.1| hypothetical protein Ssed_2728 [Shewanella sediminis HAW-EB3]
gi|157318237|gb|ABV37335.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
Length = 230
Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 5/103 (4%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159
S+ L A + + +L T T+ + + L + + I +
Sbjct: 98 SIPLLHIADATAEQLVSDGVKKVGLLGTQFTMEQEFYRGRLTDRFGIEVVIPDSAQRERV 157
Query: 160 SRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
++ EE G ++ + + + + ++L CT
Sbjct: 158 HQIIYEELCQGQVNTTS--REAYLAIIQDLQAQGAEAVILGCT 198
>gi|257126498|ref|YP_003164612.1| aspartate racemase [Leptotrichia buccalis C-1013-b]
gi|257050437|gb|ACV39621.1| aspartate racemase [Leptotrichia buccalis C-1013-b]
Length = 231
Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 54/148 (36%), Gaps = 9/148 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
++ ++ L+K VI NT ++ ++++ S+ L +
Sbjct: 60 EKSGE-----ILGEAANNLEKAGADFIVICTNTMHKVV-NQIKEKI-SIPILHIAEMTAE 112
Query: 114 AAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
I++L T T+ + + LI ++ I+ + + C I
Sbjct: 113 KILEKGLKNIALLGTKYTMEQDFYKSKLIEKGINVIIPDKNDIEIINKIIYDELCLGIIN 172
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ KK +E + + K + I+L CT
Sbjct: 173 SNSKKKFLE-IVDKLKNKGAEGIILGCT 199
>gi|187924576|ref|YP_001896218.1| aspartate racemase [Burkholderia phytofirmans PsJN]
gi|187715770|gb|ACD16994.1| aspartate racemase [Burkholderia phytofirmans PsJN]
Length = 232
Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ L ++A NT + + + + + FL A + +L
Sbjct: 67 AARQLERGGADLVMLATNTM-HRVYESIEAAI-DVPFLHIADPTGSALRAAGIERVGLLG 124
Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ +T YT L Y + I + R+ D + +
Sbjct: 125 TRYTMEQTFYTGRLRERYGLETVIPDEAERADVHRIIYDELCHGNVNDASRAVYQRVIEA 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAARGAQAVILGCT 198
>gi|159901071|ref|YP_001547318.1| aspartate racemase [Herpetosiphon aurantiacus ATCC 23779]
gi|159894110|gb|ABX07190.1| aspartate racemase [Herpetosiphon aurantiacus ATCC 23779]
Length = 231
Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 39/148 (26%), Gaps = 13/148 (8%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQA 114
++ + L V+ NT A + + F+ V A
Sbjct: 58 ETAGEILAQAARNLVAAGAECIVLCTNTMHLVATAI------EQAVEVPFIHIVDPTAAA 111
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSM--ILASRVEEYACGIKIK 172
Q I +L T T+ + + + + + + + C KI
Sbjct: 112 IQQQQLTTIGLLGTRFTMEHDFYAGRLRQRYGLAVVTPEPEQRDEIHRIIFDELCLGKID 171
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200
K + I+L CT
Sbjct: 172 ASS-KTYYLAVINDLVAAGAQGIILGCT 198
>gi|150018009|ref|YP_001310263.1| aspartate racemase [Clostridium beijerinckii NCIMB 8052]
gi|149904474|gb|ABR35307.1| aspartate racemase [Clostridium beijerinckii NCIMB 8052]
Length = 229
Score = 44.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 2/142 (1%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +++ + L+K VI NT + D+++ S+ L Q
Sbjct: 58 EVSAQILSEAALTLEKAGADFIVICTNTMHKVA-DKVQEAI-SIPILHIAEVTAQVLKAE 115
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
I++L T T+ + + + + + I + + + + I K+
Sbjct: 116 NITKIALLGTKYTMEQDFYKSKLIEDGIRVLIPDKEDIETVNEIIYNELCVGIISKHSKE 175
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
+ K ++L CT
Sbjct: 176 VYLNIIDKLTNKGAQGVILGCT 197
>gi|325121892|gb|ADY81415.1| hydantoin racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 244
Score = 44.5 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 73/206 (35%), Gaps = 34/206 (16%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131
++ +IAC R S +G A + A+Y +G S+++T T
Sbjct: 65 EQLNVDAYIIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASYISTG-FSVVTTLQRT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ ++ +L H Y + V + I VEE ++ E + E +
Sbjct: 121 VNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRIVRDECKKALAEDKS- 174
Query: 191 RTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
D IVL C + + V +D + A + +L ++N ++V
Sbjct: 175 --DTIVLGC------AGMSDLCLKLQNELG--VIVID-GVAAAVKLAEMLVQLNLKTSKV 223
Query: 245 FDDHALFLSGKPDIAMRRLMQGFGLK 270
D + P ++ GFG+
Sbjct: 224 GD-----WASPPVKNYTGILSGFGMN 244
>gi|254722213|ref|ZP_05184001.1| aspartate racemase family protein [Bacillus anthracis str. A1055]
Length = 235
Score = 44.5 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 8/140 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L K +I NT ++ ++++ + L A + +
Sbjct: 63 ILENAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180
+L T T+ + + + I + + + E I + E K +
Sbjct: 121 GLLGTKYTMEQDFYKSRIEENHIKVVVPSEKDRDKVNEAIYTELCLGKITSQSREYYKRV 180
Query: 181 EGCFIEKEGKRTDVIVLACT 200
I++ K +L CT
Sbjct: 181 IENLIQEGAKGI---ILGCT 197
>gi|327189413|gb|EGE56580.1| putative hydantoin racemase protein [Rhizobium etli CNPAF512]
Length = 247
Score = 44.5 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 64/173 (36%), Gaps = 23/173 (13%)
Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123
L +++ ++ +VIAC + RS F + LG AI A+ Q +
Sbjct: 57 LLAELKERQAAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAIVTASFLAQRFTV 113
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
T R NL+ Y + +S I +E+ A G +++ EIE
Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGARAKVRASDIPVLELEDAASGAI---GKLRAEIERA 167
Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E + IVL C T + +++ V +D + ++A L
Sbjct: 168 LEE---DGAEAIVLGCAGMT---DLARQLQEIYG--VPVVDGVSAAVKQAEAL 212
>gi|190892490|ref|YP_001979032.1| aspartate racemase [Rhizobium etli CIAT 652]
gi|190697769|gb|ACE91854.1| probable aspartate racemase protein [Rhizobium etli CIAT 652]
Length = 239
Score = 44.5 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 18/181 (9%)
Query: 24 GGLIVLQKMRFLMPEYHFIYV---ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
GGL + + + + + D G +RL + +
Sbjct: 31 GGLASAEIILHSVNFEEIVALQKAGDWAGA----------ARRLGDAAERLQAAGAGCIL 80
Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
+ C NT LI DE+ + S+ + + ++ +L+T T+ +
Sbjct: 81 I--CTNTM-HLIADEVAAKV-SVPLIHIIDETAKSLQAAGRKRPLLLATRYTMEHGFYGE 136
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ S + + + D ++++ D I+L C
Sbjct: 137 RMKSLGLDIMVPEAADRTTVHDIIFNELCAGRVHDRSREKLIDIIDRAVENGADSIILGC 196
Query: 200 T 200
T
Sbjct: 197 T 197
>gi|323698465|ref|ZP_08110377.1| aspartate racemase [Desulfovibrio sp. ND132]
gi|323458397|gb|EGB14262.1| aspartate racemase [Desulfovibrio desulfuricans ND132]
Length = 229
Score = 44.5 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 51/158 (32%), Gaps = 17/158 (10%)
Query: 45 ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF 104
D G GN + + L+ L VI NT + + S+
Sbjct: 55 GDWAGV--GNR---------LADAARTLESAGAELMVIGTNTMHKVADRVAEAV--SVPL 101
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV-- 162
+ A +AA +++L T T+ + + + + + L RV
Sbjct: 102 VHIADATAEAARAGGYARVALLGTIFTMEDDFYVGRLQDHGFEVLVPEAGDRKLVDRVIF 161
Query: 163 EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+E G + + E E + + ++L CT
Sbjct: 162 DELCRGEFLDGS--RAEFLRIIEELAARGAEAVILGCT 197
>gi|301053755|ref|YP_003791966.1| aspartate racemase family protein RacD [Bacillus anthracis CI]
gi|300375924|gb|ADK04828.1| aspartate racemase family protein RacD [Bacillus cereus biovar
anthracis str. CI]
Length = 232
Score = 44.5 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 41/129 (31%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + I + + + V + + ++ + +
Sbjct: 129 MEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188
Query: 192 TDVIVLACT 200
I+L CT
Sbjct: 189 AKAIILGCT 197
>gi|190892645|ref|YP_001979187.1| hydantoin racemase [Rhizobium etli CIAT 652]
gi|190697924|gb|ACE92009.1| probable hydantoin racemase protein [Rhizobium etli CIAT 652]
Length = 247
Score = 44.5 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 23/173 (13%)
Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123
L S++ ++ +VIAC + RS F + LG AI A+ Q +
Sbjct: 57 LLSELKERQAAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAIVTASFLAQRFTV 113
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
T R NL+ Y + +S I +EE A G +++ EIE
Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGARAKVRASDIPVLELEEAASGAI---GKLRAEIERA 167
Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E + IVL C T + + V +D + ++A L
Sbjct: 168 LEE---DGAEAIVLGCAGMT---DLARQLQDFYG--VPVVDGVSAAVKQAEAL 212
>gi|319792375|ref|YP_004154015.1| aspartate racemase [Variovorax paradoxus EPS]
gi|315594838|gb|ADU35904.1| aspartate racemase [Variovorax paradoxus EPS]
Length = 251
Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 11/157 (7%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L IACNTA L+ FP + L Q A + +++++T
Sbjct: 84 LAALGSRAVAIACNTA--HAWHANLQERFPQVELLHMARETAQQLAAQGATEVALMATEG 141
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T R + CH+ L I+ + G ++ E+ E+
Sbjct: 142 TYRVRLYEQALAEAGLGCHVPLADERQTIMRGIFDGVKAGNMPLAEQCFSEVALRLAERH 201
Query: 189 GKRTDVIVLACTHYPL-IVHVFRQLSPWPVDWLDNSD 224
G I++ CT PL + ++ + +D ++
Sbjct: 202 GPV--SIIMGCTEVPLGLQGS-AAVAG--LSLVDPAE 233
>gi|297242764|ref|ZP_06926702.1| aspartate racemase [Gardnerella vaginalis AMD]
gi|296888975|gb|EFH27709.1| aspartate racemase [Gardnerella vaginalis AMD]
Length = 242
Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 20/162 (12%)
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPA 130
V+ CNTA D+ ++ + + GAV + + ++ I L T
Sbjct: 76 MGASFIVLTCNTA-HYFYDKFQA-LTDVPIMHMPRGAVAEVSKRYPKSKCNRIGFLGTAG 133
Query: 131 TLRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+ + I + + ++ V + + +
Sbjct: 134 SRKAGVYQRAIEEAGYTFVAPDDDLQKRITSLIYDDV---KGTGDLNLRRYESVLSDMLD 190
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226
R D ++L CT L V + P + +D + ++
Sbjct: 191 PAGACRCDALILGCT--EL--SVLNEAFPLPQIPLVD-AQAV 227
>gi|213648841|ref|ZP_03378894.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
Length = 226
Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 27/182 (14%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ +L+T ATL + + A ++ + +
Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW----LDNSDSIARRARC 232
+ + + I++ CT PLI ++ +D++ S+ R A
Sbjct: 171 QALLLPQIDSLIARGAQAIIMGCTEIPLI------VAGHERAIACPMIDSTASLVRAAIR 224
Query: 233 LL 234
L
Sbjct: 225 WL 226
>gi|19910926|dbj|BAB87715.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 19/76 (25%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI H + + D+I F
Sbjct: 1 GCTHFPLIAHQIESYFMEHFALSTPPLLIHSGDAIVEYLHQ--KYALKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVVWLEKQAKEWL 74
>gi|256844019|ref|ZP_05549506.1| aspartate racemase [Lactobacillus crispatus 125-2-CHN]
gi|256849417|ref|ZP_05554849.1| aspartate racemase [Lactobacillus crispatus MV-1A-US]
gi|262046084|ref|ZP_06019047.1| aspartate racemase [Lactobacillus crispatus MV-3A-US]
gi|293380703|ref|ZP_06626752.1| aspartate racemase [Lactobacillus crispatus 214-1]
gi|295693698|ref|YP_003602308.1| aspartate racemase [Lactobacillus crispatus ST1]
gi|312976905|ref|ZP_07788654.1| aspartate racemase [Lactobacillus crispatus CTV-05]
gi|256613924|gb|EEU19126.1| aspartate racemase [Lactobacillus crispatus 125-2-CHN]
gi|256713533|gb|EEU28522.1| aspartate racemase [Lactobacillus crispatus MV-1A-US]
gi|260573414|gb|EEX29971.1| aspartate racemase [Lactobacillus crispatus MV-3A-US]
gi|290922743|gb|EFD99696.1| aspartate racemase [Lactobacillus crispatus 214-1]
gi|295031804|emb|CBL51283.1| Aspartate racemase [Lactobacillus crispatus ST1]
gi|310896233|gb|EFQ45298.1| aspartate racemase [Lactobacillus crispatus CTV-05]
Length = 249
Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 29/142 (20%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127
K P V+ CNTA D+L + + FL ++ A Y Q I +++
Sbjct: 73 AKLGPDFYVMPCNTA-HYFYDDL-AALTDIPFLHM---MRIAVHQFIEKYPQEKKIGLIA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---------EEYACGIKIKEDEIKK 178
T ++ + IH+ + + + V E+ K+ ++K
Sbjct: 128 TEGSIYDHLYVDEIHAVHREAE---LGGPEIQPMVNKLIYSDIKEKGMVDGKLYHQILQK 184
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
+ +VI+L CT
Sbjct: 185 MHDDY-------GCNVILLGCT 199
>gi|227894011|ref|ZP_04011816.1| aspartate racemase [Lactobacillus ultunensis DSM 16047]
gi|227864212|gb|EEJ71633.1| aspartate racemase [Lactobacillus ultunensis DSM 16047]
Length = 249
Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 9/132 (6%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPA 130
K P V+ CNTA D+L + + FL + + Y + I +++T
Sbjct: 73 AKLNPDFFVMPCNTA-HYFYDDL-AALTDIPFLHMMRIAVHRFIEEYPKETKIGLIATEG 130
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK--E 188
++ + IH + V + ++ + ++ ++K +
Sbjct: 131 SIYDHLYEDEIHRVHRDVE---FGGPEIQPMVTKLIYRDIKEKGVVDGKLYHQILQKMHD 187
Query: 189 GKRTDVIVLACT 200
+VI+L CT
Sbjct: 188 DYGCNVILLGCT 199
>gi|118477654|ref|YP_894805.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|229184450|ref|ZP_04311656.1| Aspartate racemase [Bacillus cereus BGSC 6E1]
gi|300118042|ref|ZP_07055790.1| aspartate racemase family protein [Bacillus cereus SJ1]
gi|118416879|gb|ABK85298.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|228599029|gb|EEK56643.1| Aspartate racemase [Bacillus cereus BGSC 6E1]
gi|298724353|gb|EFI65047.1| aspartate racemase family protein [Bacillus cereus SJ1]
Length = 232
Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + + V E I + E K + I++
Sbjct: 129 MEQDFYKSRIEENHIKVVVPSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEG 188
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 189 AQGI---ILGCT 197
>gi|229161200|ref|ZP_04289187.1| hypothetical protein bcere0009_19890 [Bacillus cereus R309803]
gi|228622296|gb|EEK79135.1| hypothetical protein bcere0009_19890 [Bacillus cereus R309803]
Length = 230
Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 49/140 (35%), Gaps = 8/140 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L +I NT ++ D+++ ++ + A + +
Sbjct: 63 VLGNAAYSLQIGGADFIIICTNTMHKVV-DKIKKNI-NIPVVHIADATAKEIKRKGIQTV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180
+L T T+ + + + I + + + S V E I + E K++
Sbjct: 121 GLLGTRYTMEQDFYKSRIEENDIKVIVPSEKNREKVSEVIYTELCLGKIVSQSRECYKKV 180
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+EK + +L CT
Sbjct: 181 IEELVEKGAQGI---ILGCT 197
>gi|239993298|ref|ZP_04713822.1| aspartate racemase [Alteromonas macleodii ATCC 27126]
Length = 234
Score = 44.5 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 47/149 (31%), Gaps = 10/149 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ L + L+ +I NT + D + ++ + A
Sbjct: 61 DKTADILIREA-----KHLETAGAKAILICTNTMHKVAADIEQK--ITIPLIHIADATGC 113
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKI 171
+ + +L T T+ +T+ ++ + + + + + + E C I
Sbjct: 114 VLQQDRVKKVGLLGTRFTMEQTFYTSRLKEIFGIEVVTPNAQQRDTVHNIIYEQLCKGVI 173
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ + E + + I+L CT
Sbjct: 174 CVES-RNAYIDIINELAAEGAEGIILGCT 201
>gi|220922696|ref|YP_002497998.1| aspartate racemase [Methylobacterium nodulans ORS 2060]
gi|219947303|gb|ACL57695.1| aspartate racemase [Methylobacterium nodulans ORS 2060]
Length = 236
Score = 44.5 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 40/141 (28%), Gaps = 13/141 (9%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
M L+ I CNTA L + S+ L V A+ Q
Sbjct: 60 AMRATVRWLETAGATCIAIPCNTAHHWHAALQAET------SVRILHIVDAVAD-TLAGQ 112
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
G I +L+T T++ + C + R ++ E
Sbjct: 113 GGCIGVLATSGTVKAGIYQKRLALRGFSCRTPDAAGQAEVMRAIRLVKAGQLAEATT--I 170
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
+ +V+ACT
Sbjct: 171 LRAQAEAMVAAGCRQVVMACT 191
>gi|207859637|ref|YP_002246288.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|206711440|emb|CAR35824.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 244
Score = 44.5 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117
Query: 117 YTQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +L+T ATL Y + ++ ++ + G K
Sbjct: 118 -----HVGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRGDKTVAQA 172
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 173 L---LLPQIDSLIARGAQAIIMGCT 194
>gi|134101592|ref|YP_001107253.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|291009953|ref|ZP_06567926.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|133914215|emb|CAM04328.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
Length = 251
Score = 44.5 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 5/133 (3%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-AAAYTQSGLISILS 127
+ +L + + CNTA + + AA + +L+
Sbjct: 87 ARVLAAGGADVIAVPCNTAHAF-LPAVVERVGVPLVHMIEQTSRHLAALRPPVRKVGLLA 145
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+R + + + + + S A V IK +D+ + +
Sbjct: 146 TTGTVRARLYETWLAT--AGIALLVPDSTSQAEEVMAAIRSIKAGKDD-RGLLARAARRL 202
Query: 188 EGKRTDVIVLACT 200
+ I+ CT
Sbjct: 203 VDRDARAIIAGCT 215
>gi|227879195|ref|ZP_03997067.1| aspartate racemase [Lactobacillus crispatus JV-V01]
gi|227861198|gb|EEJ68845.1| aspartate racemase [Lactobacillus crispatus JV-V01]
Length = 252
Score = 44.5 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 29/142 (20%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127
K P V+ CNTA D+L + + FL ++ A Y Q I +++
Sbjct: 76 AKLGPDFYVMPCNTA-HYFYDDL-AALTDIPFLHM---MRIAVHQFIEKYPQEKKIGLIA 130
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---------EEYACGIKIKEDEIKK 178
T ++ + IH+ + + + V E+ K+ ++K
Sbjct: 131 TEGSIYDHLYVDEIHAVHREAE---LGGPEIQPMVNKLIYSDIKEKGMVDGKLYHQILQK 187
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
+ +VI+L CT
Sbjct: 188 MHDDY-------GCNVILLGCT 202
>gi|302543198|ref|ZP_07295540.1| aspartate racemase [Streptomyces hygroscopicus ATCC 53653]
gi|302460816|gb|EFL23909.1| aspartate racemase [Streptomyces himastatinicus ATCC 53653]
Length = 241
Score = 44.5 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 20/156 (12%)
Query: 81 VIA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLRRTY 136
VIA CNTA + + + + + + + + +L+T T+R
Sbjct: 84 VIAIPCNTAHAFVPRI--ADHVGLPIIHMIGEVARHLTTVRPAVRTAGLLATTGTVRAGL 141
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKEIEGCFIEKEGKRTDV 194
+ Y + L V +K + + + +
Sbjct: 142 YQEWLDRY--GIRLVLPDEDDQHREVMAAIRAVKAGTGGAAVTASLARAARRLTDRGAEA 199
Query: 195 IVLACTHYPLIVHVFRQLSPW---PVDWLDNSDSIA 227
I+ CT P V +D + +A
Sbjct: 200 IIAGCT-------EIPLGLPADAVDVPLIDPAAILA 228
>gi|209963768|ref|YP_002296683.1| aspartate racemase, putative [Rhodospirillum centenum SW]
gi|209957234|gb|ACI97870.1| aspartate racemase, putative [Rhodospirillum centenum SW]
Length = 232
Score = 44.2 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 6/135 (4%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L +I NT + + + A +L+
Sbjct: 67 AGRHLRAGGAEALLICTNTM--HLMAAAVEEAAGLPLIHIADTTAAACRKAGVRRPLLLA 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFI 185
T T+ + + +H + + + R+ EE C +I+ED +
Sbjct: 125 TRYTMEHPFYAERLHRHGLEPLVPGPEDRTTIHRIIYEE-LCRGEIREDS-RAAYRAVIE 182
Query: 186 EKEGKRTDVIVLACT 200
+ D ++L CT
Sbjct: 183 RMRAEGADGVILGCT 197
>gi|264677968|ref|YP_003277875.1| aspartate racemase [Comamonas testosteroni CNB-2]
gi|262208481|gb|ACY32579.1| aspartate racemase [Comamonas testosteroni CNB-2]
Length = 231
Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 8/158 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
E L ++ L L + NT ++ L + + A+ A
Sbjct: 54 EREFEQLADYVLDAIHS-LAAGGADLVGLTGNTPNIVLDRILP--LSPVPIVSAIDATCN 110
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR---VEEYACGIK 170
AA + + +L T T+ T+ + + S +A +E
Sbjct: 111 AAQERGARKVGLLGTVFTMTNTFFKTPFE--DRGIQVIVPSEHQIAQIQAKIEAELEHGL 168
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
+KE ++ + ++ + D + LACT PLI+
Sbjct: 169 VKESTRQEFVAIIQDLQQREGIDHVALACTELPLILGE 206
>gi|319957070|ref|YP_004168333.1| aspartate racemase [Nitratifractor salsuginis DSM 16511]
gi|319419474|gb|ADV46584.1| aspartate racemase [Nitratifractor salsuginis DSM 16511]
Length = 233
Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 3/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
L+ + ++ L +IA NT + S+ L A +A + I
Sbjct: 63 LLAADARRIEAAGADLLLIATNTMHKVAPRI--EEALSIPLLHIADATAKAIRDRGTRTI 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T+ + + L + + + R+ + I +E + E
Sbjct: 121 GLLGTRFTMEEEFYAGRLRQKWGLEVLTPQKRDREIVHRIIYEELVLGIVREESRAEFLR 180
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + + I+ CT
Sbjct: 181 IINKLADRGAEGIIEGCT 198
>gi|212704398|ref|ZP_03312526.1| hypothetical protein DESPIG_02453 [Desulfovibrio piger ATCC 29098]
gi|212672119|gb|EEB32602.1| hypothetical protein DESPIG_02453 [Desulfovibrio piger ATCC 29098]
Length = 242
Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 44/141 (31%), Gaps = 6/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
R++ + L++ VI NT + + + + +
Sbjct: 61 ARILADAAQALERGGADFLVICTNTMHKVAPQIAAAV--GIPLMHIADVTARQLHMAGVQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKE 179
+ +L T T+ + + + + Q + +RV EE G+ ++
Sbjct: 119 RVGLLGTRYTMEEDFYTGRLEANGLQVLVPEAEDRAEINRVIFEELCRGVIKDSS--RET 176
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 177 FLRAIRDLAARGAQGVILGCT 197
>gi|21242547|ref|NP_642129.1| resistance protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21108002|gb|AAM36665.1| putative resistance protein [Xanthomonas axonopodis pv. citri str.
306]
Length = 234
Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 2/123 (1%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ NT + D + + P + L A A I +L T T+ + +
Sbjct: 81 DFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGLSRIGLLGTGFTMEQPFY 138
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + + RV + + E ++ + E I+L
Sbjct: 139 RQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIQPESREYVCQVMNELGQHGAQAIIL 198
Query: 198 ACT 200
CT
Sbjct: 199 GCT 201
>gi|315230222|ref|YP_004070658.1| aspartate racemase [Thermococcus barophilus MP]
gi|315183250|gb|ADT83435.1| aspartate racemase [Thermococcus barophilus MP]
Length = 226
Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 72/184 (39%), Gaps = 26/184 (14%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K+++ + L++ + I+ NT ++ +++ ++ + + A+ + A
Sbjct: 58 RKKILINAAKALERAGAEVIGISANT-SHIVFPDVQRAV-NVEMVSIIDAVAEEAKRRGL 115
Query: 121 GLISILSTPATLRRTYTSNLIHSYV------SQCHIHLVSSMILASRVEEYACGIKIKED 174
+ +L T T+ ++ + S+ I ++ +I + E +
Sbjct: 116 RKLLLLGTKTTMTMSFYKEALKEKGFDVIVPSENEIEEINRIIFEELMFENLNSKLWLIE 175
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV--DWLDNSDSIARRARC 232
I++ +E + + ++L CT PL + P V + LD ++ R
Sbjct: 176 LIERYVER-------REIEGVILGCTELPL------AIKPEDVSAEVLDTAEI---HVRA 219
Query: 233 LLPR 236
L+ +
Sbjct: 220 LIEK 223
>gi|229085488|ref|ZP_04217726.1| Aspartate racemase [Bacillus cereus Rock3-44]
gi|228697793|gb|EEL50540.1| Aspartate racemase [Bacillus cereus Rock3-44]
Length = 226
Score = 44.2 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 44/143 (30%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
++ +L+ + ++ ++ NT E S+ L +
Sbjct: 56 EEVQNQLVQVAKK-VEHSGADCILMCSNT--VHQFAEEVEKAISIPLLHIGDVSAEEIIE 112
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + +Y + I + V + I + K
Sbjct: 113 KDVKRIGLLGTKQTMEQDFYKTKLTNYGIETIIPEENERNFIHHVILHELSKGIISHQSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+ + + I+L CT
Sbjct: 173 EHFLQIIQKLIKNGAEGILLGCT 195
>gi|227327218|ref|ZP_03831242.1| putative aspartate racemase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 238
Score = 44.2 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-----GLISIL 126
L++ V+ CNTA D L L A A I ++
Sbjct: 72 LNRLSVSHIVVPCNTA-HHWFDALTEA-SDAPLLHIADATLHALTQVDKAKASPRKIGLI 129
Query: 127 STPATLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+T TL + + + + + + G + ++
Sbjct: 130 ATHGTLNAGWYQQRFAAQLGAETVVPNEQEMTTLFVPGCYAVKRGELQHGGRLLDQLAAQ 189
Query: 184 FIEKEGKRTDVIVLACT 200
+E+ +R +VLACT
Sbjct: 190 LVERGAER---LVLACT 203
>gi|261368280|ref|ZP_05981163.1| aspartate racemase [Subdoligranulum variabile DSM 15176]
gi|282569801|gb|EFB75336.1| aspartate racemase [Subdoligranulum variabile DSM 15176]
Length = 230
Score = 44.2 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 42/144 (29%), Gaps = 18/144 (12%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+M L Y + I CNTA D L P + L + A + +
Sbjct: 61 VMEQDGFSLVNYGATVLAIPCNTA-HYFYDRLAEALP-VPVLNMPRLTVEDAKASGCTKL 118
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK----- 178
IL+T TL S E + D+IK+
Sbjct: 119 GILATDGTLAAETYQLACQRAGIG---WAQPSP------EHQKGITSVIYDDIKQGRRAN 169
Query: 179 --EIEGCFIEKEGKRTDVIVLACT 200
+ + + + D VL CT
Sbjct: 170 MVKFAAAVADLKSQGCDRAVLGCT 193
>gi|418591|sp|P32968|YPNL_PECCC RecName: Full=Uncharacterized protein in pnlA 3'region
Length = 150
Score = 44.2 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVE 163
+ + QA + + + +L+T AT++ R Y NLI + + +
Sbjct: 14 ISIIDVTCQAIKHANTTRVGLLATTATVKARIYQDNLITDNIDCYTPDDADQHQVMESIY 73
Query: 164 EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
Y G + ++ ++ + I+L CT PLI+ +++ P ++D +
Sbjct: 74 AYKSGDIAGAYSLLSPVKDRLLQ---AGVEKIILGCTELPLILE--QEVRTSPQHYVDAT 128
Query: 224 DSIARRA 230
+ + ++
Sbjct: 129 EELIKKT 135
>gi|152975643|ref|YP_001375160.1| aspartate racemase [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152024395|gb|ABS22165.1| aspartate racemase [Bacillus cytotoxicus NVH 391-98]
Length = 226
Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 56/173 (32%), Gaps = 10/173 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++ ++ NT + S+ L +
Sbjct: 56 EEVKHELIDVAKK-VESSGADCILMCSNT--VHQFADEVEKAVSIPLLHIGDVSAEKIVK 112
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
Q I +L T T+ + + + +Y + I L + I + K
Sbjct: 113 QQIKRIGLLGTKQTMEKDFYKARLANYGIETMIPHKDERNLIHHIILNELSKGILSPQSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS---DSIA 227
+ + G + I+L CT PL++ ++ P PV D + A
Sbjct: 173 EILLQIATTLIGNGAEGILLGCTEIPLLLS--QKDLPIPV--FDTAYLHAETA 221
>gi|59713807|ref|YP_206582.1| racemase [Vibrio fischeri ES114]
gi|59482055|gb|AAW87694.1| predicted racemase [Vibrio fischeri ES114]
Length = 234
Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 49/150 (32%), Gaps = 8/150 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G W++ AL + + ++ +I NT + + + S+ L A
Sbjct: 55 GEWDETALI---LVEAAKSVEAGGADFLIICTNTMHKVAPEI--ESNISIPILHIADATA 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA-SRVEEYACGIK 170
+ +L T T+ + + L + + + + + + + C
Sbjct: 110 NKLVINGIKKVGLLGTRFTMEQDFYKSRLAEKFGIEVVVPEENDRTTVHNIIYDELCRGV 169
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
I D +K + + + ++L T
Sbjct: 170 INSDSREKYL-SIVKSLHEQGAEAVILGST 198
>gi|89095413|ref|ZP_01168326.1| aspartate racemase [Oceanospirillum sp. MED92]
gi|89080320|gb|EAR59579.1| aspartate racemase [Oceanospirillum sp. MED92]
Length = 258
Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 52/137 (37%), Gaps = 7/137 (5%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ ++L ++ I CNTA + +L++ P + A ++ Q ++
Sbjct: 87 LQGLEELLSAGVEAIA-IPCNTA-HFWQPDLQAKSP-VPVFHIAHACSESLQQLQISKVT 143
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-KEIEGC 183
+++T TL+ + ++ Q + + ++ +K + K +
Sbjct: 144 LMATDGTLKAGFYPEILSRQGIQLE---LPPADIQQKIMRGIYSVKSGNIALGGKLLNNA 200
Query: 184 FIEKEGKRTDVIVLACT 200
F + + ++L CT
Sbjct: 201 FQSLLNQGFERVILGCT 217
>gi|322615680|gb|EFY12600.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618740|gb|EFY15629.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322621846|gb|EFY18696.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322627571|gb|EFY24362.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322630877|gb|EFY27641.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322637904|gb|EFY34605.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642267|gb|EFY38874.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322643862|gb|EFY40410.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322651060|gb|EFY47445.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656685|gb|EFY52973.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659891|gb|EFY56134.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322661900|gb|EFY58116.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322666353|gb|EFY62531.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672772|gb|EFY68883.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322676202|gb|EFY72273.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322680686|gb|EFY76724.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684420|gb|EFY80424.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323194243|gb|EFZ79440.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197389|gb|EFZ82529.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323201494|gb|EFZ86558.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323206008|gb|EFZ90970.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323213019|gb|EFZ97821.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323215392|gb|EGA00136.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323219375|gb|EGA03860.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226196|gb|EGA10413.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323228849|gb|EGA12978.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236540|gb|EGA20616.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239960|gb|EGA24007.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323241994|gb|EGA26023.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323247859|gb|EGA31796.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251502|gb|EGA35373.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258132|gb|EGA41809.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263725|gb|EGA47246.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265681|gb|EGA49177.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270126|gb|EGA53574.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 244
Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ +L+T ATL + + A V + +K + +
Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQA-LVMQAIYTLKRGDKTV 169
Query: 177 KKE-IEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 170 AQALLLPQIDSLIARGAQAIIMGCT 194
>gi|288353362|ref|YP_003422659.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
gi|285026763|gb|ADC33856.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 237
Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 59/206 (28%), Gaps = 33/206 (16%)
Query: 16 ILIFDSGIGG------LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I + +GG L +L K+ P D P W + R L
Sbjct: 7 IGV----LGGMGPLATLDLLHKIIAATPAEK-----DQDHVPVVCWNVPQIADRQKALAG 57
Query: 70 DI-------------LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
L++ VI CNTA L + A I Q +
Sbjct: 58 KGDSPLPQLLEGIEKLNRLDVSHIVIPCNTA-HHWYHALVEVSHAPILHIADETITQILS 116
Query: 117 YTQS-GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE-D 174
+ I++T TL + + + + + + +K +
Sbjct: 117 MEAVPKKVGIIATQGTLSAGWYQKKL--IAANIEVIFPTEGEMNRLFVAGCYAVKQNKLA 174
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200
+ +E + + ++LACT
Sbjct: 175 TAAQLLEELSASLVNRGAEKLLLACT 200
>gi|158428132|pdb|2DX7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Ot3 Aspartate
Racemase Complex With Citric Acid
gi|158428133|pdb|2DX7|B Chain B, Crystal Structure Of Pyrococcus Horikoshii Ot3 Aspartate
Racemase Complex With Citric Acid
Length = 228
Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 40/130 (30%), Gaps = 5/130 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ ++ NTA + +++R + + + + +L+T T
Sbjct: 70 LEECGADFIIMPANTAHAFV-EDIRKAIK-IPIISMIEETAKKVKELGFKKAGLLATTGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASR-VEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ Y + R + E +K ++ + E +
Sbjct: 128 IVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKAGNLKLG--RELLLKTAKILEER 185
Query: 191 RTDVIVLACT 200
+ I+ CT
Sbjct: 186 GAECIIAGCT 195
>gi|308174385|ref|YP_003921090.1| Aspartate racemase [Bacillus amyloliquefaciens DSM 7]
gi|307607249|emb|CBI43620.1| Aspartate racemase [Bacillus amyloliquefaciens DSM 7]
Length = 232
Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 8/140 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + L+K VI NT + ++ ++ L A + I
Sbjct: 63 ALGEVARSLEKAGADFIVICTNTM-HKVLGYIQEMI-TIPILHIADATAEQIIRQDIRSI 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEI 180
+L T T+ + + + I S+ + L + + E IK I K+I
Sbjct: 121 GLLGTKYTMEQDFYKSRIASHDINVIVPDDDERELINNIIYQELCLGEIKQSSKNIYKKI 180
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+++ + +L CT
Sbjct: 181 INNLVDRGAEGI---ILGCT 197
>gi|301597799|ref|ZP_07242807.1| glutamate racemase [Acinetobacter baumannii AB059]
Length = 75
Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 205 IVHVFRQLSPWPVDWLDNSDSI-ARRARCLLPRINTHQTRVFDDHALFLSGKP 256
+ +++ + ++ S+++ A+ R L ++ +H ++ S P
Sbjct: 1 VSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLNSESPNEGNHIIWTSSDP 53
>gi|224159171|ref|XP_002338051.1| predicted protein [Populus trichocarpa]
gi|222870507|gb|EEF07638.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 15/155 (9%)
Query: 82 IACNTAFTLIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSG---LISILSTPATLRRTYT 137
+ACNTA +L++ FP + L +QAA + Q+G +L+T T
Sbjct: 81 LACNTA--HAWHGQLQALFPQLHVLHI---ARQAALHMQAGGAQQAIVLATQGTYDSGLY 135
Query: 138 SNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV-I 195
+ + L + + + D + + DV +
Sbjct: 136 DAALAECGITALQPDAQGRARLMQGIYDGVKQGDM--DLAARCFGEVLAPLLQRHGDVPV 193
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
++ CT PL + + +D + +A+
Sbjct: 194 IMGCTEIPLALP--QSPLARGAKLVDPAWILAQAL 226
>gi|34495568|ref|NP_899783.1| aspartate/glutamate racemace protein [Chromobacterium violaceum
ATCC 12472]
gi|34101423|gb|AAQ57792.1| probable aspartate/glutamate racemace protein [Chromobacterium
violaceum ATCC 12472]
Length = 250
Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 17/144 (11%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L L+VI NT L+ D++R+ P + + + + A A ++IL T T
Sbjct: 91 LAGAGAELAVIPANTV-HLVVDDIRARSP-IPLISILDVVADACAARGLKRVAILGTRWT 148
Query: 132 LRRTYTS-----NLIHSYVSQCH---IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+ R I + + + I V + + +E
Sbjct: 149 MARRLYQAPLAARGIEEMIPDEEQQVVIQRA--IFEELVPTG-RASAATLAALLEVVEA- 204
Query: 184 FIEKEGKRTDVIVLACTHYPLIVH 207
+ + D + LACT PL++
Sbjct: 205 ---MKAQGCDGVALACTELPLVLD 225
>gi|209550235|ref|YP_002282152.1| Asp/Glu/hydantoin racemase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535991|gb|ACI55926.1| Asp/Glu/hydantoin racemase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 247
Score = 44.2 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 62/173 (35%), Gaps = 23/173 (13%)
Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123
L S++ ++ +VIAC + RS F + LG A+ A Q +
Sbjct: 57 LLSELKERQTAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAVATAGFLAQRFTV 113
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
T R NL+ Y + +S I +E+ A G +++ EIE
Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGERARVRASDIPVLELEDPASGAI---GKLRAEIERA 167
Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E + IVL C T + + + V +D + ++A L
Sbjct: 168 LAE---DGAEAIVLGCAGMT---DLARELQAIYG--VPVIDGVSAAVKQAEAL 212
>gi|325924955|ref|ZP_08186381.1| aspartate racemase [Xanthomonas perforans 91-118]
gi|325544618|gb|EGD15975.1| aspartate racemase [Xanthomonas perforans 91-118]
Length = 221
Score = 44.2 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 38/123 (30%), Gaps = 2/123 (1%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ NT + D + + P + L A A + +L T T+ + +
Sbjct: 68 DFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGISRVGLLGTRFTMEQPFY 125
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + + RV + + E ++ E I+L
Sbjct: 126 RQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIKPESREYFCKVMGELGQHGAQAIIL 185
Query: 198 ACT 200
CT
Sbjct: 186 GCT 188
>gi|145300427|ref|YP_001143268.1| aspartate racemase [Aeromonas salmonicida subsp. salmonicida A449]
gi|142853199|gb|ABO91520.1| aspartate racemase [Aeromonas salmonicida subsp. salmonicida A449]
Length = 239
Score = 44.2 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 38/163 (23%), Gaps = 29/163 (17%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +I NT + + + L A + + +L T T
Sbjct: 78 LQAGGADFLLIGTNTMHKVAPEI--EAAIDIPLLHIADATARQLLADGVQRVGLLGTRFT 135
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI---------KKEIEG 182
+ + + + L +L + I DE+ + E
Sbjct: 136 MEQDFYKGRLQ--------TLFGLEVLVPPAAQRERVHSIIYDELCLGEIRASSRAEYLA 187
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDN 222
++L CT L V D
Sbjct: 188 IIAGLAEAGAQAVILGCT-------EIALLVGDSKAAVPLYDT 223
>gi|4768858|gb|AAD29652.1|AF124757_12 aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 232
Score = 44.2 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 57/155 (36%), Gaps = 8/155 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIA--CNTAFTLIKDELRSTFPSMAFLGAVPAI 111
+ + L LM ++++ VIA NT ++ D+L+ + + V A
Sbjct: 54 DKDYTKLTTYLMHGVNNLIAAGAD---VIALTGNTP-HIVFDDLQKQ-SDVPLISIVEAT 108
Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ +L T T+ + LI + +S +A+++
Sbjct: 109 CDEVKRQNITKVGLLGTRFTMEADFIKKPLIANGMSVITPQPKEIDYIANKIYSELEKGI 168
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
++ + + I ++ + I+L CT PL+
Sbjct: 169 FSQNTLSEFISIISRMRDSDGIEAIILGCTELPLL 203
>gi|302526545|ref|ZP_07278887.1| predicted protein [Streptomyces sp. AA4]
gi|302435440|gb|EFL07256.1| predicted protein [Streptomyces sp. AA4]
Length = 225
Score = 44.2 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 52/160 (32%), Gaps = 33/160 (20%)
Query: 81 VIA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
VIA C+TA D L + + A ++G + +L T T+
Sbjct: 76 VIAIPCHTA-HFFLDRLAADSGVPFVDMVAETAEFLAG--RTGPVGLLGTRGTIAAGLYQ 132
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK-EIE--GCFIEKEGKRTDV- 194
V ++ E + +K+ E+ ++ D
Sbjct: 133 R------------RVPAVEWVVPSEAGQREVDAAVAAVKRGELADGAAHFDRALADVDTP 180
Query: 195 I-VLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARR 229
+ VLACT PL ++ LD +D++ RR
Sbjct: 181 LSVLACTELPL-------VAGKSAGVLDPTDLLADAVIRR 213
>gi|153951898|ref|YP_001397342.1| putative aspartate racemase [Campylobacter jejuni subsp. doylei
269.97]
gi|152939344|gb|ABS44085.1| putative aspartate racemase [Campylobacter jejuni subsp. doylei
269.97]
Length = 231
Score = 44.2 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +IA NT + DE++ ++ L + +A
Sbjct: 61 AQILSQCAKKLELAGASFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L T T+ + + LI +S I+ + C +IK+D +K +
Sbjct: 119 KIGLLGTKYTMAQDFYKKMLIEENISVIIPSDEDIQIVNDIIFNELCKGEIKQDSKEKYL 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + K ++LACT
Sbjct: 179 -NIIKKLQEKGAKGVLLACT 197
>gi|257869226|ref|ZP_05648879.1| aspartate racemase [Enterococcus gallinarum EG2]
gi|257803390|gb|EEV32212.1| aspartate racemase [Enterococcus gallinarum EG2]
Length = 234
Score = 44.2 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 8/138 (5%)
Query: 67 LFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
L DI + QP V+ CNTA D+L+ P A K +G ++
Sbjct: 65 LLDDIAKQNLLQPNFIVLTCNTA-HYFFDQLQEATPIPLLHMPREAAKSLQKEGVTGKVA 123
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
L T +++ + ++ + L +V + D + +++
Sbjct: 124 FLGTEGSIKAGIYEAELR--ACGFDVY-LPEPQLQQKVNTLIYDRIKESDTLDQDLYFEI 180
Query: 185 IEKEGKRT--DVIVLACT 200
+E+ + + VL CT
Sbjct: 181 LEEVTHKIGCEKSVLGCT 198
>gi|86358508|ref|YP_470400.1| hydantoin racemase protein [Rhizobium etli CFN 42]
gi|86282610|gb|ABC91673.1| probable hydantoin racemase protein [Rhizobium etli CFN 42]
Length = 247
Score = 44.2 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 61/173 (35%), Gaps = 23/173 (13%)
Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123
L S++ + +VIAC + RS F + LG A+ A Q +
Sbjct: 57 LLSELRARQVAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAVVTAGFLAQRFTV 113
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
T R NL+ Y + +S I +E+ A G +++ EIE
Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGDRAKVRASDIPVLELEDAASGAI---GKLRAEIERA 167
Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E + IVL C T + + + V +D + ++A L
Sbjct: 168 LAE---DGAEAIVLGCAGMT---DLARELQDIYG--VPVVDGVAAAVKQAEAL 212
>gi|219667320|ref|YP_002457755.1| aspartate racemase [Desulfitobacterium hafniense DCB-2]
gi|219537580|gb|ACL19319.1| aspartate racemase [Desulfitobacterium hafniense DCB-2]
Length = 231
Score = 44.2 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 49/139 (35%), Gaps = 2/139 (1%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + L+ V+ NT + DE+++ + L Q A +
Sbjct: 61 AEILANAARSLEAAGAEFIVLCTNTMHKVA-DEIQAGL-QIPLLHIADMTAQQALTSNIR 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +L T T+ + + S+ + + + + + V + I E + + +
Sbjct: 119 TIGLLGTRYTMEQEFYSSRLEAQGIKVLTPEEGDKAVVNEVIYQELCLGIINQESRNQFK 178
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ + IVL CT
Sbjct: 179 RIIADLVEQGAQGIVLGCT 197
>gi|261821090|ref|YP_003259196.1| aspartate racemase [Pectobacterium wasabiae WPP163]
gi|261605103|gb|ACX87589.1| aspartate racemase [Pectobacterium wasabiae WPP163]
Length = 238
Score = 44.2 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 72 LDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQS-GLISI 125
L++ V+ CNTA L + S P + + AI + I +
Sbjct: 72 LNRLSVSHIVVPCNTAHHWFDALAEA---SHAPLVHIADATLHAITPLVEEKEVPQKIGL 128
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++T TL + + +S + + + + +++
Sbjct: 129 IATHGTLNAGWYQQRFTTQLSAETVVPNEQEMTTLFVPGCYAVKRCELQHGGRLLEQLAA 188
Query: 183 CFIEKEGKRTDVIVLACT 200
+E+ +R +VLACT
Sbjct: 189 QLVERGAER---LVLACT 203
>gi|213029645|ref|ZP_03344092.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 199
Score = 44.2 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 17 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 72
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ +L+T ATL + + A ++ + +
Sbjct: 73 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 125
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 126 QALLLPQIDSLIARGAQAIIMGCT 149
>gi|168234643|ref|ZP_02659701.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194735758|ref|YP_002117430.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|204926710|ref|ZP_03217912.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|194711260|gb|ACF90481.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291651|gb|EDY31001.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|204323375|gb|EDZ08570.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 244
Score = 43.8 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ +L+T ATL + + A ++ + +
Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 171 QALLLPQIDSLIARGAQAIIMGCT 194
>gi|168821040|ref|ZP_02833040.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205342298|gb|EDZ29062.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320084589|emb|CBY94380.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 244
Score = 43.8 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ +L+T ATL + + A ++ + +
Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 171 QALLLPQIDSLIARGAQAIIMGCT 194
>gi|16763318|ref|NP_458935.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29144796|ref|NP_808138.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213428375|ref|ZP_03361125.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213581046|ref|ZP_03362872.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|213609708|ref|ZP_03369534.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|289825451|ref|ZP_06544682.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|25512393|pir||AD1067 probable aspartate racemase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16505627|emb|CAD03355.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140435|gb|AAO71998.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 244
Score = 43.8 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ +L+T ATL + + A ++ + +
Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 171 QALLLPQIDSLIARGAQAIIMGCT 194
>gi|213052215|ref|ZP_03345093.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
Length = 246
Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 64 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 119
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ +L+T ATL + + A ++ + +
Sbjct: 120 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 172
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 173 QALLLPQIDSLIARGAQAIIMGCT 196
>gi|16767754|ref|NP_463369.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56416294|ref|YP_153369.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|167551230|ref|ZP_02344985.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|167991305|ref|ZP_02572404.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168232862|ref|ZP_02657920.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168243994|ref|ZP_02668926.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194451334|ref|YP_002048531.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194469149|ref|ZP_03075133.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197365218|ref|YP_002144855.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|238910673|ref|ZP_04654510.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|16423076|gb|AAL23328.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56130551|gb|AAV80057.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194409638|gb|ACF69857.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194455513|gb|EDX44352.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197096695|emb|CAR62317.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|205323833|gb|EDZ11672.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205330368|gb|EDZ17132.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333029|gb|EDZ19793.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205337028|gb|EDZ23792.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261249596|emb|CBG27465.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996863|gb|ACY91748.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160993|emb|CBW20529.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915607|dbj|BAJ39581.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321222517|gb|EFX47589.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323132850|gb|ADX20280.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332991319|gb|AEF10302.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 244
Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 17/144 (11%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ +L+T ATL + + A ++ + +
Sbjct: 118 -----HVGLLATNATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAA 170
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 171 QALLLPQIDSLIARGAQAIIMGCT 194
>gi|167615897|ref|ZP_02384532.1| aspartate racemase [Burkholderia thailandensis Bt4]
Length = 230
Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 42/166 (25%), Gaps = 16/166 (9%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R M + + V+ NT + S+ F+ V +A
Sbjct: 62 RRMRQAARQAEAGGADFVVLCTNTMHKVAPAI--EAALSVPFVHIVDPTARALRRAGVRR 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR--VEEYACGIKIKEDEIKKEI 180
+L T T+ + + S + + A V + D +
Sbjct: 120 AGLLGTRFTMEEAFYRERMASL-HGIDVIVPDERDQAVIHDVIYDELCHGVVRDASRDAY 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
E ++L CT L D++ +
Sbjct: 179 RRIIESLEAAGAQGVILGCT-------EIALLIGPE----DSALPV 213
>gi|300856110|ref|YP_003781094.1| aspartate racemase [Clostridium ljungdahlii DSM 13528]
gi|300436225|gb|ADK15992.1| aspartate racemase [Clostridium ljungdahlii DSM 13528]
Length = 230
Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 3/138 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT L D + + L A + + +L T T
Sbjct: 71 LKKGGADFIIICTNTMHKLAPDI--ESKVGIKVLHIAEAAGKKIIEKNIKTVGLLGTKFT 128
Query: 132 LRRTYTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + ++ + I + + ++ I +D +++ + +
Sbjct: 129 MEEDFYKKVLKDKFNINVSIPDENDREVIHQIIYNELCKGIIKDPSREKYKKIINKLSLN 188
Query: 191 RTDVIVLACTHYPLIVHV 208
+ IVL CT PL++
Sbjct: 189 GAEGIVLGCTEIPLLIKQ 206
>gi|260890046|ref|ZP_05901309.1| hypothetical protein GCWU000323_01208 [Leptotrichia hofstadii
F0254]
gi|260860069|gb|EEX74569.1| aspartate racemase [Leptotrichia hofstadii F0254]
Length = 231
Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 60/184 (32%), Gaps = 19/184 (10%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
++ + L+K VI NT ++ ++++ S+ L +
Sbjct: 60 EKSGE-----ILGEAAYNLEKAGADFIVICTNTMHKVV-NQIKEKI-SIPILHIAEMTAE 112
Query: 114 AAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
I++L T T+ + + LI ++ I+ + + C I
Sbjct: 113 KILEKGLKNIALLGTKYTMEQDFYKSKLIEKGINVIIPDKNDIEIINKVIYDELCLGTIN 172
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARR 229
+ KK +E + K + I+L CT L V D + A++
Sbjct: 173 SNSKKKFLE-IVDKLRSKGAEGIILGCT-------EIGLLIKNEDTDVPLFDTAIIHAKQ 224
Query: 230 ARCL 233
A
Sbjct: 225 AAIY 228
>gi|253687797|ref|YP_003016987.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754375|gb|ACT12451.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 238
Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 39/133 (29%), Gaps = 21/133 (15%)
Query: 80 SVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-----GLISILSTPA 130
V+ CNTA L ++ + A A I +++T
Sbjct: 80 IVVPCNTAHHWFDALAEESYA------PLIHIADATLHAITLPADAKKAPQKIGLIATHG 133
Query: 131 TLRRTYTSNLIHSYVSQCHI---HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TL + + + + + + G + ++ + +
Sbjct: 134 TLNVGWYQQRFAAQLGAETVVPDEQEMTTLFVPGCYAVKRGELQHGGRLLDQLAARLVAR 193
Query: 188 EGKRTDVIVLACT 200
+R +VLACT
Sbjct: 194 GAER---LVLACT 203
>gi|50083589|ref|YP_045099.1| putative aspartate racemase [Acinetobacter sp. ADP1]
gi|49529565|emb|CAG67277.1| putative aspartate racemase [Acinetobacter sp. ADP1]
Length = 236
Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +++ L IL+ +I CNTA D+L+ + + + A +
Sbjct: 58 DKPFEKMREYL-----KILENANVGCIIIPCNTA-HFWFDQLQQQTHTK-MISIIEATVR 110
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA 159
+ + I IL+T AT+ + ++ + + + L
Sbjct: 111 FIQKSNAQEICILATSATINTELYQKELANHQIKFTLPELEIQQLV 156
>gi|315039136|ref|YP_004032704.1| aspartate racemase [Lactobacillus amylovorus GRL 1112]
gi|312277269|gb|ADQ59909.1| aspartate racemase [Lactobacillus amylovorus GRL 1112]
gi|327184252|gb|AEA32699.1| aspartate racemase [Lactobacillus amylovorus GRL 1118]
Length = 249
Score = 43.8 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 15/135 (11%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127
DK V+ CNTA D+L + FL ++ A Y I +++
Sbjct: 73 DKLGTDFMVMPCNTA-HYFYDDL-AALTDKPFLHM---MRIAVHNFTDNYPDEKKIGLIA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186
T ++ ++ I + + + V E ++ + ++
Sbjct: 128 TEGSIYDHLYADEIKRVGRKVE---LGGPEIQPMVNELIYSDIKEKGTVDHDLYHKILKT 184
Query: 187 KEGK-RTDVIVLACT 200
K +VI+L CT
Sbjct: 185 MHDKYGCNVILLGCT 199
>gi|89902487|ref|YP_524958.1| aspartate racemase [Rhodoferax ferrireducens T118]
gi|89347224|gb|ABD71427.1| Aspartate racemase [Rhodoferax ferrireducens T118]
Length = 243
Score = 43.8 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 38/149 (25%), Gaps = 16/149 (10%)
Query: 72 LDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L++ V+ NT I + ++ + L A + +L T
Sbjct: 76 LERAGADALVLCTNTMHKVAAAISNAVQ-----IPLLHIADPTAVAIKQAGYTTVGLLGT 130
Query: 129 PATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T+ + + L + + L RV + + +
Sbjct: 131 RFTMEQDFYRSRLEQDHSLTVLTPKPADRDLVHRVIYDELCLGQVLPASRDAYLRVIADL 190
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWP 216
+ I+L CT L
Sbjct: 191 GARGAQAIILGCT-------EIAMLIGPH 212
>gi|315932541|gb|EFV11475.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni 327]
Length = 231
Score = 43.8 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +IA NT + DE++ ++ L + +A
Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L T T+ + + LI +S I+ + C +IK+D +K +
Sbjct: 119 KIGLLGTKYTMTQDFYKKILIEENISVITPSDEDIKIVNDIIVNELCKGEIKQDSKEKYL 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + K ++LACT
Sbjct: 179 -NIINKLQEKGAKGVLLACT 197
>gi|116253108|ref|YP_768946.1| hydantoin racemase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257756|emb|CAK08854.1| putative hydantoin racemase [Rhizobium leguminosarum bv. viciae
3841]
Length = 247
Score = 43.8 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 64/173 (36%), Gaps = 23/173 (13%)
Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123
L +++ ++ +VIAC + R TF ++ LG A+ A Q +
Sbjct: 57 LLAELKERQGLGYDAAVIAC--FDDTGLEAAR-TFANVPILGLCESAVVTAGFLAQRFTV 113
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
T R NL+ Y + +S I +E+ G +++ EIE
Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGDRAKVRASDIPVLELEDAGSGAI---GKLRAEIERA 167
Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+E + IVL C T + +++ V +D + ++A L
Sbjct: 168 LLE---DGAEAIVLGCAGMT---DLARELQEIYG--VPVVDGVAAAVKQAEAL 212
>gi|90424471|ref|YP_532841.1| aspartate racemase [Rhodopseudomonas palustris BisB18]
gi|90106485|gb|ABD88522.1| aspartate racemase [Rhodopseudomonas palustris BisB18]
Length = 246
Score = 43.8 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 48/140 (34%), Gaps = 5/140 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+++ + +L++ +I NT L DE++ S+ L +A
Sbjct: 69 QILADIARVLEQGGASCLLICTNTMHKLA-DEVQQAV-SIPLLHIADVTAEAVKAEGLSR 126
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEI 180
+L+T T+ + + + + + + + C + + +
Sbjct: 127 PLLLATRYTMEQDFYVERLREGFGLDPVIPDADGRTVIHDIIFDELCQGIVSDAS-RNLY 185
Query: 181 EGCFIEKEGKRTDVIVLACT 200
E + K D ++L CT
Sbjct: 186 LDVIAEGKAKGADCVILGCT 205
>gi|213409287|ref|XP_002175414.1| hydantoin racemase [Schizosaccharomyces japonicus yFS275]
gi|212003461|gb|EEB09121.1| hydantoin racemase [Schizosaccharomyces japonicus yFS275]
Length = 236
Score = 43.8 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 17/164 (10%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY- 136
V+AC + L+ + +R +F + LG V A Q+A + I IL+T T R
Sbjct: 72 DAIVVACYSPTPLV-EMIRESF-DVPCLGIVQASIQSA-MSVGRRIGILTT--TKRSELM 126
Query: 137 -TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L H +S+ I + S L VE+ A + + + + +
Sbjct: 127 LYELLKHLGISRTIIAGIQSSGLT--VEQLATLPEEERISLLVSKARKLVLDLNADVVCL 184
Query: 196 ---VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
VLA + + ++ + +D S + L+ +
Sbjct: 185 GGAVLAS-----LRDLIQEAIGPNIVIVDGVRSAVEQLATLVRQ 223
>gi|237653714|ref|YP_002890028.1| aspartate racemase [Thauera sp. MZ1T]
gi|237624961|gb|ACR01651.1| aspartate racemase [Thauera sp. MZ1T]
Length = 239
Score = 43.8 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 38/129 (29%), Gaps = 9/129 (6%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ NT + ++ L A + + +L T T+ +
Sbjct: 75 GADFIVLCTNTMHKVAPAI--EAATNIPLLHIADPTAAAIRHASLSRVGLLGTRFTMEQA 132
Query: 136 YTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACG-IKIKEDEIKKEIEGCFIEKEGKR 191
+ L + + RV EE G ++ + + +E+ +
Sbjct: 133 FYRGRLEERHGIAVLVPAADDRERVHRVIYEELCLGRVEDASRAAYRAVMRRLVERGAQG 192
Query: 192 TDVIVLACT 200
+L CT
Sbjct: 193 I---ILGCT 198
>gi|228910604|ref|ZP_04074416.1| amino-acid racemase [Bacillus thuringiensis IBL 200]
gi|228849019|gb|EEM93861.1| amino-acid racemase [Bacillus thuringiensis IBL 200]
Length = 224
Score = 43.8 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 8/143 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+KK ++ L+ + CNTA L +EL+ + S+ L V Q
Sbjct: 57 EAMKKAIIEGAQK-LESTGVEFIAMPCNTA-HLYFEELQHSL-SIPILNIVDETLQTIPE 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+++L+T AT++ + I I + + + + IK E E
Sbjct: 114 NI-KRVTLLATEATIQAGIYQDGIAKRN----IEYIHNEQWQESINQIITCIKGGEIEEA 168
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + + D ++ACT
Sbjct: 169 RKLWSVLVVQLKAEVDTAIIACT 191
>gi|19910924|dbj|BAB87713.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 43.8 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI H + + D+I + F
Sbjct: 1 GCTHFPLIAHQIEGYFMEHFALSTPPLLVHSGDAIVEYLQQ--KYALKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVVWLEKQAKEWL 74
>gi|328886300|emb|CCA59539.1| aspartate racemase [Streptomyces venezuelae ATCC 10712]
Length = 235
Score = 43.8 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 27/154 (17%)
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
++K L L L I CNTA L D++ S P+ + +A +
Sbjct: 72 IRKHLFTLVEW-----GADLLAIPCNTAHAL-LDDIASELPAPLVDIVDATLDEAVRLSP 125
Query: 120 SGLISILSTPATLRRTYTSN---------LIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
G + +T T+ + Q +H + ++ A R EE A +
Sbjct: 126 EGG-WLTATTGTVASGVYQKRAAARGYPLHVPRDAEQERVHAAAGLVKAGRTEEAAGAFQ 184
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204
D + + + CT PL
Sbjct: 185 ---DVVTSLLRRRPLPVLAA--------CTELPL 207
>gi|218463154|ref|ZP_03503245.1| probable hydantoin racemase protein [Rhizobium etli Kim 5]
Length = 226
Score = 43.8 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 63/173 (36%), Gaps = 23/173 (13%)
Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123
L S++ ++ +VIAC + RS F + LG A+ A Q +
Sbjct: 36 LLSELKERQSAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAVVTAGFLAQRFTV 92
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
T R NL+ Y + +S I +E A G +++ EIE
Sbjct: 93 ---VTTLERSRVLIDNLVRRYGMGERAKVRASDIPVLELENAASGAI---GKLRAEIERA 146
Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E + IVL C T + H +++ V +D + ++A L
Sbjct: 147 LAE---DGAEAIVLGCAGMT---DLAHQLQEIYG--VPVVDGVSAAVKQAEAL 191
>gi|268678695|ref|YP_003303126.1| aspartate racemase [Sulfurospirillum deleyianum DSM 6946]
gi|268616726|gb|ACZ11091.1| aspartate racemase [Sulfurospirillum deleyianum DSM 6946]
Length = 233
Score = 43.8 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 64/177 (36%), Gaps = 26/177 (14%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+++ + L++ + ++ NT L + F FL A A
Sbjct: 58 EETAQIIKEAAISLERAGVDIILLCTNTM--HKILPLVTPFIQTPFLHIAEATAHALNEN 115
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIK--ED 174
+ +L T T++ T+ +++++ + + I +++ +R+ +E G D
Sbjct: 116 GAKKSILLGTKFTMQETFYTDILNQHSIEIIIPDKNAIETINRIIFDELCIGKIETASRD 175
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT-----------HYPL-------IVHVFRQLS 213
+ I ++++ D ++L CT H PL + + +
Sbjct: 176 SFIEIIHA--LKRQNDEIDSVILGCTEIGLLLNQESSHLPLFDTTLLHVKEALKYVL 230
>gi|238854410|ref|ZP_04644752.1| aspartate racemase [Lactobacillus jensenii 269-3]
gi|260665101|ref|ZP_05865951.1| aspartate racemase [Lactobacillus jensenii SJ-7A-US]
gi|282931814|ref|ZP_06337299.1| aspartate racemase [Lactobacillus jensenii 208-1]
gi|313473005|ref|ZP_07813492.1| aspartate racemase [Lactobacillus jensenii 1153]
gi|238833032|gb|EEQ25327.1| aspartate racemase [Lactobacillus jensenii 269-3]
gi|239528788|gb|EEQ67789.1| aspartate racemase [Lactobacillus jensenii 1153]
gi|260561155|gb|EEX27129.1| aspartate racemase [Lactobacillus jensenii SJ-7A-US]
gi|281304121|gb|EFA96238.1| aspartate racemase [Lactobacillus jensenii 208-1]
Length = 250
Score = 43.8 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 12/151 (7%)
Query: 57 DHALKKRLMFLFSDILDKY---QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIK 112
K+ F D ++K +P V+ CNTA +L + + FL + AI
Sbjct: 54 KDHTKENFFFALKDDVEKQSLLKPDFFVMPCNTA-HYFYHDL-AALTEVPFLNMMDIAIH 111
Query: 113 QAAAYTQS-GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ I +++T ++ I + + V +
Sbjct: 112 TFLEKFPNEKKIGLIATEGSIYDRLYEKSIEKVGREVE---FGGSEIQPMVTDLIYHNIK 168
Query: 172 KEDEIKKEIEGCFIEK--EGKRTDVIVLACT 200
++ + KE+ ++K + +VI+L CT
Sbjct: 169 EKGVVNKELYHRILQKMHDEYGCNVILLGCT 199
>gi|239503532|ref|ZP_04662842.1| Hydantoin racemase [Acinetobacter baumannii AB900]
Length = 244
Score = 43.4 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 77/220 (35%), Gaps = 41/220 (18%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+++ ++LD VIAC R S +G A + A+Y
Sbjct: 59 EEIRQ------GELLD---VDAYVIAC--FGDPALYAARE-ISSAPVIGIAEAAMRTASY 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEI 176
+G + + T+ ++ +L H Y + V + I VEE I
Sbjct: 107 VSTGFSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRTI 161
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRA 230
+ E + E + D IVL C + + V +D + ++A
Sbjct: 162 RDECKKALAEDKS---DAIVLGC------AGMSDLCIKLQNELG--VIVIDGVAAAVKQA 210
Query: 231 RCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+L ++N ++V D + P ++ GFG++
Sbjct: 211 E-MLVQLNLKTSKVGD-----WASPPVKNYTGILSGFGMR 244
>gi|16127508|ref|NP_422072.1| aspartate racemase [Caulobacter crescentus CB15]
gi|221236323|ref|YP_002518760.1| aspartate racemase [Caulobacter crescentus NA1000]
gi|13424970|gb|AAK25240.1| aspartate racemase [Caulobacter crescentus CB15]
gi|220965496|gb|ACL96852.1| aspartate racemase [Caulobacter crescentus NA1000]
Length = 253
Score = 43.4 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 7/141 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + L+ V+ NT + + + L +A
Sbjct: 81 RRLADAARALEAGGADFLVLCTNTM--HREADEIEAAVHIPLLHIADPTGEAIKAAGLST 138
Query: 123 ISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKE 179
+ +L T T+ + L+ + + R+ EE G + ++
Sbjct: 139 VGLLGTAFTMEHDFYRGRLLKKHGLSVLTPDADDRAIVHRIIYEELVAGRVLDAS--REA 196
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 197 YRAVIARLVDRGAEAIILGCT 217
>gi|331701597|ref|YP_004398556.1| aspartate racemase [Lactobacillus buchneri NRRL B-30929]
gi|329128940|gb|AEB73493.1| aspartate racemase [Lactobacillus buchneri NRRL B-30929]
Length = 236
Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 82 IACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
I CNTA DEL+ + L V AIK + + +++T TL
Sbjct: 82 IPCNTA-HYFYDELQ-KLTDVPILHMPKETVAAIKD--YAPNAKRVGLIATEGTLHDQIY 137
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RTDVI 195
+ I + + + + +A + ++E+ + + + + + + D++
Sbjct: 138 DHEIINAGYEL---VKPTDKIADQTMTLIYDDIKAKNEVDEGLYHLILSQMVESLKCDIV 194
Query: 196 VLACT 200
+L CT
Sbjct: 195 ILGCT 199
>gi|92112334|ref|YP_572262.1| aspartate racemase [Chromohalobacter salexigens DSM 3043]
gi|91795424|gb|ABE57563.1| Aspartate racemase [Chromohalobacter salexigens DSM 3043]
Length = 239
Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 7/140 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + ++ +IA NT + + L A ++ +
Sbjct: 63 TLAAAARQIEHAGADFLLIATNTMHKVAPQV--EAAIDIPLLHIADATAESLVADGITRV 120
Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEI 180
+L T T+ + + L Y + + +V EE G E ++
Sbjct: 121 GLLGTRFTMEQDFYKQRLSERYGIDVVVPDDTQRERVHQVIFEELCLGRI--ESASREAF 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 179 LAVIDALHARGAQAVILGCT 198
>gi|159185592|ref|NP_357525.2| aspartate racemase [Agrobacterium tumefaciens str. C58]
gi|159140726|gb|AAK90310.2| aspartate racemase [Agrobacterium tumefaciens str. C58]
Length = 230
Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 41/131 (31%), Gaps = 2/131 (1%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + ++A NT L +D + + L A +++T
Sbjct: 69 KALQRGGADFILLATNTMHKLARDMMEGV--DIPLLHIADATADRILSAGLSRPGLIATA 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ +++ + + + + R+ +I DE + E
Sbjct: 127 FTMEQSFYKDRLVAASLHPVLPDADDRRTVHRIIYDELCREIIRDESRSTYEDVARRLVD 186
Query: 190 KRTDVIVLACT 200
D ++L CT
Sbjct: 187 AGADCMILGCT 197
>gi|315125973|ref|YP_004067976.1| aspartate racemase [Pseudoalteromonas sp. SM9913]
gi|315014487|gb|ADT67825.1| aspartate racemase [Pseudoalteromonas sp. SM9913]
Length = 231
Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 21/139 (15%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ +I NT + DE+ S ++ L A + + + +L T T
Sbjct: 71 VEAGGAEFLLICTNTMHKVA-DEIASNI-TIPILHIADATAEQLKHDNITRVGLLGTQFT 128
Query: 132 LRRTYTSN----------LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ + + LI + +H V + C I +D I
Sbjct: 129 MEQNFYKERLTNKHNIEVLIPEPNERKRVHEV--------IYSQLCQGIIDDDSRADYI- 179
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 180 RIIERLFAQGAQAIILGCT 198
>gi|229011500|ref|ZP_04168688.1| Aspartate racemase [Bacillus mycoides DSM 2048]
gi|228749791|gb|EEL99628.1| Aspartate racemase [Bacillus mycoides DSM 2048]
Length = 232
Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 44/137 (32%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L K +I NT ++ ++++ ++ L + I
Sbjct: 63 VLGNAAYSLQKGGADFIIICTNTMHKVV-EKIKENI-NIPVLHIADTTAKEIKRKGIQTI 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + I + + + V + + ++ +
Sbjct: 121 GLLGTKYTMEQDFYKLRIEENHIKVMVPSKKDRDKINEVIYTELCLGKITPQSREYYKRV 180
Query: 184 FIEKEGKRTDVIVLACT 200
E + I+L CT
Sbjct: 181 IEELVQEGAQGIILGCT 197
>gi|307729191|ref|YP_003906415.1| aspartate racemase [Burkholderia sp. CCGE1003]
gi|307583726|gb|ADN57124.1| aspartate racemase [Burkholderia sp. CCGE1003]
Length = 232
Score = 43.4 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ L ++A NT + + + + FL A + +L
Sbjct: 67 AARQLERGGAQLVMLATNTM-HRVYESI-ERAIHVPFLHIADPTGSALRAAGVERVGLLG 124
Query: 128 TPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ +T YT L Y + R+ + E ++ +G
Sbjct: 125 TRYTMEQTFYTGRLRERYGLDTLAPDEADRADVHRIIYDELCHGDVKRESREVYQGVIES 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LRERGAQAVILGCT 198
>gi|167644868|ref|YP_001682531.1| aspartate racemase [Caulobacter sp. K31]
gi|167347298|gb|ABZ70033.1| aspartate racemase [Caulobacter sp. K31]
Length = 233
Score = 43.4 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 39/139 (28%), Gaps = 13/139 (9%)
Query: 68 FSDILDKYQPVLSVIACNTA--FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ L+ V+ NT D + L A + +
Sbjct: 69 AAKALETGGADFLVLCTNTMHRCAWAIDAAVQ----IPLLHIADPTAAAIQAAGITRVGL 124
Query: 126 LSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIE 181
L T T+ + + L + + + + E A + E+ + +
Sbjct: 125 LGTAFTMEQDFYRGRLEDKFGLEVLVPDEDDRAAVHGIIYRELVAGQVLGTSREVYRAVI 184
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 185 RRLVARGAQG---VILGCT 200
>gi|34557174|ref|NP_906989.1| hypothetical protein WS0774 [Wolinella succinogenes DSM 1740]
gi|34482890|emb|CAE09889.1| conserved hypothetical protein [Wolinella succinogenes]
Length = 231
Score = 43.4 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 17/150 (11%), Positives = 52/150 (34%), Gaps = 3/150 (2%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ + + + L++ IA NT + S+ + ++ + ++
Sbjct: 58 TILEEKLLQAALELERLGCQGLAIASNTM--HLLAPALEGALSIPLVHIADSVGEESSLK 115
Query: 119 QSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+++L T T+ + + + L + + L I ++ +
Sbjct: 116 GYKKLALLGTLFTMEKDFYASRLQERFDLEVITPAKEERNLVHECIYRELVNNIFTEDSR 175
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
++ + + + ++L CT PL++
Sbjct: 176 RDFIQIIHGLKERGAEAVILGCTEIPLLLE 205
>gi|161504935|ref|YP_001572047.1| hypothetical protein SARI_03065 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160866282|gb|ABX22905.1| hypothetical protein SARI_03065 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 244
Score = 43.4 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKA-RMISILDATLEDIPPSA-RH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL ++ + L + + + + +
Sbjct: 119 VGLLATNATLATGLYQKKAQAHGLTLIQPEDAGQALVMQA--IYTLKRGDKPAAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACT 200
+ I++ CT
Sbjct: 177 QIDSLVARGVQAIIMGCT 194
>gi|172061098|ref|YP_001808750.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171993615|gb|ACB64534.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 230
Score = 43.4 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT + D + + ++ FL A +++L
Sbjct: 67 AARQLEAAGADLVVLTTNTM-HRVYDAIEAAV-ALPFLHIADPTGAALRAAGVERVALLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + L + + ++ R+ + + + E
Sbjct: 125 TRYTMELPFYAERLRDKFGLDVLVPDEAARGDVHRIIYDELCHGVIDAASRATYVAIIDE 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAKRGAQAVILGCT 198
>gi|126699872|ref|YP_001088769.1| putative amino acid recemase [Clostridium difficile 630]
gi|255101398|ref|ZP_05330375.1| putative amino acid recemase [Clostridium difficile QCD-63q42]
gi|115251309|emb|CAJ69140.1| Asp/Glu racemase [Clostridium difficile]
Length = 228
Score = 43.4 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VI NT + D+++ + + L + +++L T T
Sbjct: 71 LQEAGADFIVICTNTM-HKVSDKIQESI-HIPLLHIADVTATVLREKEIKKVALLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + N+I + + I I+ + + I + KK + +
Sbjct: 129 MEQDFYKNVIINNGIEVLIPNEEDRIIVNDTIFNELCLGIISESSKKAFLSIIDKLGKQG 188
Query: 192 TDVIVLACT 200
+ ++L CT
Sbjct: 189 AEAVILGCT 197
>gi|223039517|ref|ZP_03609805.1| aspartate racemase [Campylobacter rectus RM3267]
gi|222879313|gb|EEF14406.1| aspartate racemase [Campylobacter rectus RM3267]
Length = 227
Score = 43.4 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 25/70 (35%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L IACNTA K + ++ + + + + + I++++T T
Sbjct: 70 LKNAGCEAICIACNTAHYFAKRLTQECGVNILHIAKIATASIKSNFPHAKKIAVIATTGT 129
Query: 132 LRRTYTSNLI 141
N +
Sbjct: 130 TAAKIYENEL 139
>gi|86358367|ref|YP_470259.1| aspartate racemase protein [Rhizobium etli CFN 42]
gi|86282469|gb|ABC91532.1| probable aspartate racemase protein [Rhizobium etli CFN 42]
Length = 239
Score = 43.4 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 43/133 (32%), Gaps = 2/133 (1%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++ L +I NT LI +++ + S+ + + ++ +L+
Sbjct: 67 VAERLQAGGAGCVLICTNTM-HLIAEQVAARI-SVPLIHIIDETAKSLHAAGRKRPLLLA 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + + + + + + D ++++
Sbjct: 125 TRYTMEHGFYAERMKGLGLDIIVPDAADRTTVHDIIFNELCAGRVRDSSREKLIDIIDRA 184
Query: 188 EGKRTDVIVLACT 200
+ D I+L CT
Sbjct: 185 AERGADSIILGCT 197
>gi|120553990|ref|YP_958341.1| aspartate racemase [Marinobacter aquaeolei VT8]
gi|120323839|gb|ABM18154.1| aspartate racemase [Marinobacter aquaeolei VT8]
Length = 229
Score = 43.4 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 35/137 (25%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ L V+ NT + + L A A +
Sbjct: 63 ILGAVGKALAAAGADFIVLCTNTMHKVADSI--EKASGLPMLHIADATADALHRDGIDCV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + + + + + V I K+
Sbjct: 121 GLLGTKFTMEQAFYKERLENRGIRVLVPGDAQREFVHTVIYDELCRGIIRQPSKQGYLQV 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 181 LDSLAARGAQGIILGCT 197
>gi|310800198|gb|EFQ35091.1| carbon-nitrogen hydrolase [Glomerella graminicola M1.001]
Length = 603
Score = 43.4 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 46/149 (30%), Gaps = 15/149 (10%)
Query: 78 VLSVIACNTAFTLIK-DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
++AC LR P +G + A AA T G +++ + R
Sbjct: 427 DAVLVAC--YSDHALIRMLREELPRQPVIGIMEASLFAAR-TLGGRFGLVA-VSERSRVL 482
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ IH Y V S L ++ I + +E K DV++
Sbjct: 483 HEDSIHHYGFSTSCAGVISCKLGVLDLHEKSQGEVMG--IMANVGKRLVE--EKGADVLL 538
Query: 197 LAC---THYPLIVHVFRQLSPWPVDWLDN 222
L C T P + V +D
Sbjct: 539 LGCAGMT--P-LKGAVEAAVGEDVQVVDG 564
>gi|333008508|gb|EGK27978.1| aspartate racemase [Shigella flexneri K-272]
gi|333020629|gb|EGK39889.1| aspartate racemase [Shigella flexneri K-227]
Length = 239
Score = 43.0 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 38/134 (28%), Gaps = 14/134 (10%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VI CNTA EL+ + L V I +L+T AT
Sbjct: 71 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNAT 128
Query: 132 LRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
L I S + + G ++ E
Sbjct: 129 LYMGLYQKGIESLGFTCVSPDAD----GQKKVMESIYSLKAGNIAHAQKLMNEQAEILFS 184
Query: 187 KEGKRTDVIVLACT 200
+ +++VL CT
Sbjct: 185 R---GAEILVLGCT 195
>gi|300946728|ref|ZP_07160978.1| aspartate racemase [Escherichia coli MS 116-1]
gi|300976693|ref|ZP_07173549.1| aspartate racemase [Escherichia coli MS 200-1]
gi|15808704|gb|AAL08433.1|AF326777_8 unknown [Shigella flexneri 2a]
gi|300308501|gb|EFJ63021.1| aspartate racemase [Escherichia coli MS 200-1]
gi|300453611|gb|EFK17231.1| aspartate racemase [Escherichia coli MS 116-1]
Length = 229
Score = 43.0 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 38/134 (28%), Gaps = 14/134 (10%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VI CNTA EL+ + L V I +L+T AT
Sbjct: 61 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNAT 118
Query: 132 LRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
L I S + + G ++ E
Sbjct: 119 LYMGLYQKGIESLGFTCVSPDAD----GQKKVMESIYSLKAGNIAHAQKLMNEQAEILFS 174
Query: 187 KEGKRTDVIVLACT 200
+ +++VL CT
Sbjct: 175 R---GAEILVLGCT 185
>gi|333006274|gb|EGK25783.1| aspartate racemase [Shigella flexneri K-218]
Length = 239
Score = 43.0 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 38/134 (28%), Gaps = 14/134 (10%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VI CNTA EL+ + L V I +L+T AT
Sbjct: 71 LEDAGAECIVIPCNTA-HYWFKELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNAT 128
Query: 132 LRRTYTSNLIHSY-----VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
L I S + + G ++ E
Sbjct: 129 LYMGLYQKGIESLGFTCVSPDAD----GQKKVMESIYSLKAGNIAHAQKLMNEQAEILFS 184
Query: 187 KEGKRTDVIVLACT 200
+ +++VL CT
Sbjct: 185 R---GAEILVLGCT 195
>gi|83717323|ref|YP_439354.1| aspartate racemase [Burkholderia thailandensis E264]
gi|83651148|gb|ABC35212.1| aspartate racemase [Burkholderia thailandensis E264]
Length = 230
Score = 43.0 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 41/165 (24%), Gaps = 14/165 (8%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R M + + V+ NT + S+ F+ V +A
Sbjct: 62 RRMRQAARQAEAGGADFVVLCTNTMHKVAPAI--EAALSVPFVHIVDPTARALRRAGVRR 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T T+ + + S + + V + D +
Sbjct: 120 AGLLGTRFTMEEAFYRERMASLHGIDVIVPDERDRAVIHDVIYDELCHGVVRDASRDAYR 179
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
E ++L CT L D++ +
Sbjct: 180 RIIESLEAAGAQGVILGCT-------EIALLIGPE----DSALPV 213
>gi|257142474|ref|ZP_05590736.1| aspartate racemase [Burkholderia thailandensis E264]
Length = 221
Score = 43.0 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 41/165 (24%), Gaps = 14/165 (8%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R M + + V+ NT + S+ F+ V +A
Sbjct: 53 RRMRQAARQAEAGGADFVVLCTNTMHKVAPAI--EAALSVPFVHIVDPTARALRRAGVRR 110
Query: 123 ISILSTPATLRRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L T T+ + + S + + V + D +
Sbjct: 111 AGLLGTRFTMEEAFYRERMASLHGIDVIVPDERDRAVIHDVIYDELCHGVVRDASRDAYR 170
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
E ++L CT L D++ +
Sbjct: 171 RIIESLEAAGAQGVILGCT-------EIALLIGPE----DSALPV 204
>gi|241205465|ref|YP_002976561.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240859355|gb|ACS57022.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 239
Score = 43.0 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 16/154 (10%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+RL + + + + C NT LI D++ S+ + + ++
Sbjct: 62 RRLADVALRLQIAGAGCILI--CTNTM-HLIADKVAEKI-SVPLIHIIDETAKSLHAAGR 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179
+L+T T+ + S+ + S + + + C K+ + + +
Sbjct: 118 KRPLLLATRYTMEHGFYSDRMKSLGLDIMVPDAGDRTTVHDIIFDELCAGKVLDSS-RDK 176
Query: 180 IEGCFIEKEGKRTDVIVLACT---------HYPL 204
+ D I+L CT H PL
Sbjct: 177 LMAVISRAIDNGADSIILGCTEICLILDPNHLPL 210
>gi|262278788|ref|ZP_06056573.1| hydantoin racemase [Acinetobacter calcoaceticus RUH2202]
gi|262259139|gb|EEY77872.1| hydantoin racemase [Acinetobacter calcoaceticus RUH2202]
Length = 244
Score = 43.0 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 32/205 (15%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ +IAC R S +G A + A+Y +G + + T+
Sbjct: 65 EQLNVDAYIIAC--FGDPALYAARE-ITSAPVIGIAEAAMRTASYVSTGFSVVTTLQRTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +L H Y +Q V + I VEE ++ E + E +
Sbjct: 122 NMSW--HLAHRYGAQPFCKNVRACDI---AVEELELPDSDAYRIVRDECKKALAEDKS-- 174
Query: 192 TDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
D IVL C + + V +D + ++A +L +N ++V
Sbjct: 175 -DAIVLGC------AGMSDLCLKLQNDLG--VIVIDGVTAAVKQAE-MLVHLNLKTSKVG 224
Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270
D + P ++ GFG++
Sbjct: 225 D-----WASPPAKNYTGILSGFGMR 244
>gi|291085128|ref|ZP_06352145.2| putative aspartate racemase [Citrobacter youngae ATCC 29220]
gi|291072057|gb|EFE10166.1| putative aspartate racemase [Citrobacter youngae ATCC 29220]
Length = 229
Score = 43.0 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 58/162 (35%), Gaps = 28/162 (17%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VI CNTA +EL+ + + L V I +L+T AT
Sbjct: 61 LEDAGAECIVIPCNTA-HFWFNELKESCHT-ELLSIVETTLNEVKNCGKSRIGLLATNAT 118
Query: 132 LRRTYTSNLIHSY---------VSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
L I S SQ + + + A IK + + ++ E
Sbjct: 119 LYMGLYQKGIESLGLTCVSPDSSSQEKVMESIYCL--------KAGDIKRAQTLMNEQAE 170
Query: 182 GCFIEKEGKRTDVIVLACTHYP-LIVHVFRQLSPWPVDWLDN 222
F + +VIVL CT P ++ ++ P ++D+
Sbjct: 171 ALF----SRGAEVIVLGCTEVPVILAEAVKK---SPAKYIDS 205
>gi|255307272|ref|ZP_05351443.1| putative amino acid recemase [Clostridium difficile ATCC 43255]
Length = 228
Score = 43.0 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VI NT + D+++ + + L + +++L T T
Sbjct: 71 LQEAGADFIVICTNTM-HKVSDKIQESV-HIPLLHIADVTATVLREKEIKKVALLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + N+I + + I I+ + + I + KK + +
Sbjct: 129 MEQDFYKNVIINNGIEVLIPNEEDRIIVNDTIFNELCLGIISESSKKAFLSIIDKLGKQG 188
Query: 192 TDVIVLACT 200
+ ++L CT
Sbjct: 189 AEAVILGCT 197
>gi|294102668|ref|YP_003554526.1| aspartate racemase [Aminobacterium colombiense DSM 12261]
gi|293617648|gb|ADE57802.1| aspartate racemase [Aminobacterium colombiense DSM 12261]
Length = 237
Score = 43.0 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + + CNTA D R P ++ AA ++ G +L+T T
Sbjct: 78 LARWGADILAVPCNTA-HYFIDSFREELPVPFVHIIEATVELAAERSREGA-WLLATSGT 135
Query: 132 LRRTYTSNLIHS 143
R
Sbjct: 136 KRSGMYERYAEK 147
>gi|282599710|ref|ZP_05971586.2| aspartate racemase [Providencia rustigianii DSM 4541]
gi|282568330|gb|EFB73865.1| aspartate racemase [Providencia rustigianii DSM 4541]
Length = 251
Score = 43.0 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ NT + + L A + + T I +L T T
Sbjct: 91 LQAAGADFLVLCTNTMHKVAPQI--EDISKLPLLHIADATGECISNTGIKTIGLLGTAFT 148
Query: 132 LRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + N L + I + + + + ++ K E + + +
Sbjct: 149 MEQAFYKNRLSDKFGLNVIIPNDADRKVVHDIIYNELCVGKIKESSKAEYQRIMRQLVKQ 208
Query: 191 RTDVIVLACT 200
+ I+L CT
Sbjct: 209 GAEGIILGCT 218
>gi|325957607|ref|YP_004293019.1| aspartate racemase [Lactobacillus acidophilus 30SC]
gi|325334172|gb|ADZ08080.1| aspartate racemase [Lactobacillus acidophilus 30SC]
Length = 249
Score = 43.0 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 15/135 (11%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127
DK V+ CNTA D+L + FL ++ A Y I +++
Sbjct: 73 DKLGTDFMVMPCNTA-HYFYDDL-AALTGKPFLHM---MRIAVHNFTDNYPDEKKIGLIA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186
T ++ ++ I + + + V E ++ + ++
Sbjct: 128 TEGSIYDHLYADEIKRVGRKVE---LGGPEIQPMVNELIYSDIKEKGTVDHDLYHKILKT 184
Query: 187 KEGK-RTDVIVLACT 200
K +VI+L CT
Sbjct: 185 MHDKYGCNVILLGCT 199
>gi|319652508|ref|ZP_08006623.1| aspartate racemase [Bacillus sp. 2_A_57_CT2]
gi|317395762|gb|EFV76485.1| aspartate racemase [Bacillus sp. 2_A_57_CT2]
Length = 240
Score = 43.0 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 10/141 (7%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+K +I NT + +++S ++ L A +
Sbjct: 74 VLGNAARSLEKGGADFIIICTNTM-HKVIGDIQSKI-NIPILHIADATAAQIKKKGIKSV 131
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACG--IKIKEDEIKKE 179
+L T T+ + + + Q + + + +++ EE G + D KK
Sbjct: 132 GLLGTRYTMEEDFYKSRLEFNGIQVIVPNDNEREIINKIIYEELCLGKIHQKSRDYYKKV 191
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
I+G I+ K +L CT
Sbjct: 192 IQG-LIKSGAKGI---ILGCT 208
>gi|260102957|ref|ZP_05753194.1| aspartate racemase [Lactobacillus helveticus DSM 20075]
gi|260083242|gb|EEW67362.1| aspartate racemase [Lactobacillus helveticus DSM 20075]
Length = 223
Score = 43.0 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 14/144 (9%)
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQSGLISILSTPATLRRTYTSNLI 141
CNTA DEL + + FL + K Y + +++T ++R I
Sbjct: 84 CNTA-HYWYDEL-AALSDVPFLNMMEIAVHKFVDDYPDEKNLGLIATEGSIRDGLYVKYI 141
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD--VIVLAC 199
++ + V + G ++ ++ E+ + + V++L C
Sbjct: 142 KKVN---KTPVLGGPEIQLMVNQLIYGDIKEKGKVDPELFHHILTLMHDKYGCKVVLLGC 198
Query: 200 THYPL-IVHVFRQLSPWPVDWLDN 222
T L + + + V +D
Sbjct: 199 T--ELSLANE--KALDPDVAVIDP 218
>gi|86149571|ref|ZP_01067801.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88597747|ref|ZP_01100980.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
84-25]
gi|218561766|ref|YP_002343545.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|85839839|gb|EAQ57098.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190051|gb|EAQ94027.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
84-25]
gi|112359472|emb|CAL34256.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|284925378|gb|ADC27730.1| putative aspartate racemase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315927766|gb|EFV07093.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315930862|gb|EFV09852.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni 305]
Length = 231
Score = 43.0 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +IA NT + DE++ ++ L + +A
Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L T T+ + + LI +S I+ + C +IK+D +K +
Sbjct: 119 KIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDIIFNELCKGEIKQDSKEKYL 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + K ++LACT
Sbjct: 179 -NIIKKLQEKGAKGVLLACT 197
>gi|126641492|ref|YP_001084476.1| hydantoin racemase [Acinetobacter baumannii ATCC 17978]
Length = 210
Score = 43.0 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 71/197 (36%), Gaps = 38/197 (19%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+++ ++LD VIAC R S +G A + A+Y
Sbjct: 25 EEIRQ------GELLD---VDAYVIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASY 72
Query: 118 TQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDE 175
+G S+++T T+ ++ +L H Y + V + I VEE
Sbjct: 73 VSTG-FSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRT 126
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARR 229
I+ E + E + D IVL C + + V +D + ++
Sbjct: 127 IRDECKKALAEDKS---DAIVLGC------AGMSDLCLKLQNELG--VIVIDGVAAAVKQ 175
Query: 230 ARCLLPRINTHQTRVFD 246
A +L ++N ++V D
Sbjct: 176 AE-MLVQLNLKTSKVGD 191
>gi|184157805|ref|YP_001846144.1| Hydantoin racemase [Acinetobacter baumannii ACICU]
gi|332876493|ref|ZP_08444260.1| hydantoin racemase [Acinetobacter baumannii 6014059]
gi|183209399|gb|ACC56797.1| Hydantoin racemase [Acinetobacter baumannii ACICU]
gi|322508120|gb|ADX03574.1| Hydantoin-racemase [Acinetobacter baumannii 1656-2]
gi|323517694|gb|ADX92075.1| Hydantoin racemase [Acinetobacter baumannii TCDC-AB0715]
gi|332735351|gb|EGJ66411.1| hydantoin racemase [Acinetobacter baumannii 6014059]
Length = 244
Score = 43.0 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 41/220 (18%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+++ ++LD VIAC R S +G A + A+Y
Sbjct: 59 EEIRQ------GELLD---VDAYVIAC--FGDPALYAARE-ISSAPVIGIAEAAMRTASY 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEI 176
+G + + T+ ++ +L H Y + V + I VEE I
Sbjct: 107 VSTGFSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRTI 161
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRA 230
+ E + E + D IVL C + + V +D + ++A
Sbjct: 162 RDECKKALAEDKS---DAIVLGC------AGMSDLCIKLQNELG--VIVIDGVAAAVKQA 210
Query: 231 RCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+L ++N ++V D + P ++ GFG+
Sbjct: 211 E-MLVQLNLKTSKVGD-----WASPPVKNYTGILSGFGMS 244
>gi|157691918|ref|YP_001486380.1| aspartate racemase [Bacillus pumilus SAFR-032]
gi|157680676|gb|ABV61820.1| aspartate racemase [Bacillus pumilus SAFR-032]
Length = 232
Score = 43.0 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 58/176 (32%), Gaps = 24/176 (13%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTP 129
L++ +IACNTA + ++ + + + ++ A + + +L T
Sbjct: 71 LERAGADFILIACNTA-HFFLENVQQS-THIPIMNM--PLETAKHLNKHHYTSVGLLCTD 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILAS----RVEEYACGIKIKEDEIKKEIEGCFI 185
TL+ + V+ E + +I
Sbjct: 127 GTLKTKLYQKACAHHKIDVMTPSEELQKNVMNGIYAVKAGKLSKGESELALASKI----- 181
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRIN 238
+ + I+ CT PL++ + V +D + +A+ A L L ++N
Sbjct: 182 -LINQGAEAIIAGCTEIPLVLRSTKA-----VKVIDPTVILAKEAVKLVYELEKLN 231
>gi|19910918|dbj|BAB87710.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 43.0 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 20/76 (26%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI H + + D+I R F
Sbjct: 1 GCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDTIVEYLRQ--KYALKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDAIWLEKQAKEWL 74
>gi|116334099|ref|YP_795626.1| aspartate racemase [Lactobacillus brevis ATCC 367]
gi|116099446|gb|ABJ64595.1| Aspartate racemase [Lactobacillus brevis ATCC 367]
Length = 237
Score = 43.0 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 5/119 (4%)
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATLRRTYTSNLIH 142
CNTA D+L++ +K+ + ++ I I T T+ + +
Sbjct: 84 CNTA-HYFYDDLQAATTIPLLHMPRETVKEIQRHFPEAKRIGITGTQGTITDKVYEDEV- 141
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDVIVLACT 200
+ L ++ I A +E IK ++ + + + D+++L CT
Sbjct: 142 -LAAGLTPVLPTAEIEAETMELIYDNIKEQDRVDAPLYHRILRQMHDEQGADLVILGCT 199
>gi|260777724|ref|ZP_05886617.1| aspartate racemase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605737|gb|EEX32022.1| aspartate racemase [Vibrio coralliilyticus ATCC BAA-450]
Length = 230
Score = 43.0 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 6/149 (4%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G W+ A+ + + L+K +IA NT + S+ L A
Sbjct: 55 GEWDKTAII---LSEAAQSLEKAGADFLLIATNTMHKVASQV--EEAVSIPLLHIADATG 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
Q A + +L T T+ + + L + + + L V +
Sbjct: 110 QQLAEQGINKVGLLGTAFTMEQLFYKQRLTDKFGIEVIVPNGVQRRLVHDVIYNELCLGE 169
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
K++ + + ++L CT
Sbjct: 170 INARSKQDFKTIIEDLSADGAQGVILGCT 198
>gi|168262443|ref|ZP_02684416.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|205348837|gb|EDZ35468.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 244
Score = 43.0 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 19/145 (13%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 117
Query: 117 YTQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +L+T ATL Y + ++ ++ + G K
Sbjct: 118 -----YVGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRGDKTAAQA 172
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I++ CT
Sbjct: 173 L---LLPQIDSLIARGAQAIIMGCT 194
>gi|150377827|ref|YP_001314422.1| Asp/Glu racemase [Sinorhizobium medicae WSM419]
gi|150032374|gb|ABR64489.1| Asp/Glu racemase [Sinorhizobium medicae WSM419]
Length = 241
Score = 43.0 bits (101), Expect = 0.049, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 12/128 (9%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131
+ VIAC R +G A Q A T S S+++T P +
Sbjct: 65 EAQGVDAYVIAC--FDDPGLHAAREVAKG-PVIGICQAAVQVA-MTISRRFSVITTLPRS 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +LI Y ++ H V ++ L + E + +EIE + K
Sbjct: 121 V--PIIEDLISDYGAERHCRKVRAIDLPVLA--LEEDPQKAERLLLQEIE---LAKAEDG 173
Query: 192 TDVIVLAC 199
+ IVL C
Sbjct: 174 AEAIVLGC 181
>gi|218463300|ref|ZP_03503391.1| aspartate racemase [Rhizobium etli Kim 5]
Length = 261
Score = 43.0 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 48/140 (34%), Gaps = 5/140 (3%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+RL + + + + C NT LI D++ + S+ + + ++
Sbjct: 84 RRLGEVAERLQAAGAGCILI--CTNTM-HLIADKVAAKI-SVPLIHIIDETAKSLHAAGR 139
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+L+T T+ + ++ + S + + + D ++++
Sbjct: 140 KRPLLLATRYTMEHGFYTDRMKSLGLDVMVPDATDRTTVHDIIFNELCAGRVHDSSREKL 199
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ D I+L CT
Sbjct: 200 IDIIDRAAERGADSIILGCT 219
>gi|116252958|ref|YP_768796.1| aspartate racemase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257606|emb|CAK08703.1| putative aspartate racemase [Rhizobium leguminosarum bv. viciae
3841]
Length = 239
Score = 43.0 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 49/153 (32%), Gaps = 14/153 (9%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+RL + + + + C NT LI D++ S+ + + ++
Sbjct: 62 RRLADVALRLQIAGAGCILI--CTNTM-HLIADKVAEKI-SVPLIHIIDETAKSLHAAGR 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+L+T T+ + S+ + S + S + D ++++
Sbjct: 118 KRPLLLATRYTMEHGFYSDRMKSLGFDIMVPDASDRTTVHDIIFNELCAGKVLDSSRQKL 177
Query: 181 EGCFIEKEGKRTDVIVLACT---------HYPL 204
D I+L CT H PL
Sbjct: 178 FDVIARAVDNGADSIILGCTEICLILDPDHLPL 210
>gi|149185927|ref|ZP_01864242.1| Aspartate racemase [Erythrobacter sp. SD-21]
gi|148830488|gb|EDL48924.1| Aspartate racemase [Erythrobacter sp. SD-21]
Length = 222
Score = 43.0 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 10/144 (6%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
++ + L+ VIA NT + D + S+ L A+ A A +
Sbjct: 51 IASILVESARRLEAAGAQGIVIAANTM-HKVYDRVAEGI-SIPVLHIADAVGVAMAEAKC 108
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
++L T + ++ VS L V + ++ + ++
Sbjct: 109 ENAALLGTRFVMTESFYR---QRLVSHGVDLLPPDPNDVELV-DGIIYKELMLGRVTRDA 164
Query: 181 EGCFI----EKEGKRTDVIVLACT 200
E K+ + D IVLACT
Sbjct: 165 ERALKTVITMKDKEGADAIVLACT 188
>gi|260466809|ref|ZP_05812994.1| aspartate racemase [Mesorhizobium opportunistum WSM2075]
gi|259029421|gb|EEW30712.1| aspartate racemase [Mesorhizobium opportunistum WSM2075]
Length = 231
Score = 42.6 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 43/118 (36%), Gaps = 4/118 (3%)
Query: 85 NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHS 143
NT L D+++++ S+ + A A ++L+T T+ + + L
Sbjct: 84 NTMHKLA-DQVQASV-SIPLIHIADATAAAIKRAGMQRPALLATRFTMEQDFYKGRLADK 141
Query: 144 YVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
Y + + + RV + C + + + + + D I++ CT
Sbjct: 142 YGLSPVVPDAAGRDMVHRVIYDELCQGIVTDASKTAYVAEAERLRREEAADSIIMGCT 199
>gi|242238745|ref|YP_002986926.1| aspartate racemase [Dickeya dadantii Ech703]
gi|242130802|gb|ACS85104.1| aspartate racemase [Dickeya dadantii Ech703]
Length = 241
Score = 42.6 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 16/137 (11%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILST 128
L++ IACNTA D+L+++ L A AA I +++T
Sbjct: 76 LNRLGASHIAIACNTA-HHWFDDLQAS-SEAPLLHIADAALSQLTTAAPPSERRIGLIAT 133
Query: 129 PATLRRTYTSNLIHSYV-----SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
TL + + + G + +++
Sbjct: 134 HGTLAAGWYQQRLAERGMTPVLPDADELE---TLFVPGCYAVKRGEVAAGGRLFEQLAER 190
Query: 184 FIEKEGKRTDVIVLACT 200
E+ +R ++LACT
Sbjct: 191 LAERGAER---LILACT 204
>gi|332715830|ref|YP_004443296.1| Hydantoin racemase [Agrobacterium sp. H13-3]
gi|325062515|gb|ADY66205.1| Hydantoin racemase [Agrobacterium sp. H13-3]
Length = 257
Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 25/164 (15%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+VIAC D R+ + +G A A A+ + T R
Sbjct: 73 GARAAVIAC--FDDTGLDAARA-LADIPVIGICEAAVSATAFIAQR--FTIVTTMERSRL 127
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L+H Y ++ ++ I +E+ A + +++EI + R + I
Sbjct: 128 PLEHLVHRYGMSARCNVRAADIPVLSLEDPASN---ARERLREEIS---LALRQDRAEAI 181
Query: 196 VLAC------THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
VL C T R V +D + ++A L
Sbjct: 182 VLGCAGMADLT------AELRSEFG--VPVIDGVAAAVKQAESL 217
>gi|254502015|ref|ZP_05114166.1| aspartate racemase subfamily [Labrenzia alexandrii DFL-11]
gi|222438086|gb|EEE44765.1| aspartate racemase subfamily [Labrenzia alexandrii DFL-11]
Length = 230
Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 45/159 (28%), Gaps = 18/159 (11%)
Query: 45 ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF 104
D RLM + L++ VI NT + + +
Sbjct: 55 GDWARA-----------TRLMIDAAQNLERGGAECLVICTNTMHKMAGEV--QAAVDIPL 101
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV- 162
+ A A S +L+T T+ + + +L + + I R+
Sbjct: 102 IHIADATAPAIKSAGSTAPLLLATAYTMEQDFYKGHLRDQHGIEVRIPEADDRAAVHRII 161
Query: 163 -EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
EE G + + + D ++ CT
Sbjct: 162 YEELCQGEVLDRSKTR--YLDVVDRAVAAGADGVIFGCT 198
>gi|152968015|ref|YP_001363799.1| aspartate racemase [Kineococcus radiotolerans SRS30216]
gi|151362532|gb|ABS05535.1| aspartate racemase [Kineococcus radiotolerans SRS30216]
Length = 233
Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
L+ + L+ L +IA NT + + S+ L A +
Sbjct: 63 LLAAEARGLEAAGADLLLIATNTM--HRVFDAVAGAVSVPVLHLADVTAVAVRAAGLSRV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T+ + + + + + R+ + ED ++ +
Sbjct: 121 GLLATRYTMEQDFYRARLAEGGVTTIVPGEADREEVQRIVFEELCVGRVEDASRRRLLAV 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ IVL CT
Sbjct: 181 AAGLVAAGAEGIVLGCT 197
>gi|320180171|gb|EFW55109.1| Glutamate racemase [Shigella boydii ATCC 9905]
Length = 61
Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 221 DNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
D+ +IARR LL + A ++ P+ + ++Q +G ++
Sbjct: 2 DSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFET 53
>gi|170703494|ref|ZP_02894257.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170131600|gb|EDT00165.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 230
Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 39/134 (29%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT ++ FL A +++L
Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHGAIEAAVALPFLHIADPTGAALRAAGVERVALLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + L + + ++ R+ + + + E
Sbjct: 125 TRYTMELPFYAERLRDKFDLDVLVPDEAARNDVHRIIYDELCHGVIDAASRAIYVAIIDE 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAKRGAQAVILGCT 198
>gi|170726261|ref|YP_001760287.1| aspartate racemase [Shewanella woodyi ATCC 51908]
gi|169811608|gb|ACA86192.1| aspartate racemase [Shewanella woodyi ATCC 51908]
Length = 231
Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 44/140 (31%), Gaps = 3/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + L+ +I NT + DE+++ ++ L A +
Sbjct: 61 AAILSEAASGLEAANADFFMICTNTMHKVA-DEVQAKV-NIPLLHIADATAELLVKDGIK 118
Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L T T+ ++ L Y + + RV + + +
Sbjct: 119 KVGLLGTQFTMAESFYKGRLTEKYGIEVLTPSDDDQSIIHRVIYDELCQGVVNAQSRSAY 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ D ++L CT
Sbjct: 179 VEIIEKLRDNGADAVILGCT 198
>gi|78047388|ref|YP_363563.1| putative aspartate racemase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78035818|emb|CAJ23509.1| putative aspartate racemase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 234
Score = 42.6 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 2/123 (1%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ NT + D + + P + L A A + +L T T+ + +
Sbjct: 81 DFIVLCTNTMHCVA-DAITAATP-LPLLHIADATADALVAAGISRVGLLGTRFTMEQPFY 138
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + + RV + + + ++ E I+L
Sbjct: 139 RQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIKPQSREYFCKVMGELGQHGAQAIIL 198
Query: 198 ACT 200
CT
Sbjct: 199 GCT 201
>gi|311033066|ref|ZP_07711156.1| aspartate racemase family protein [Bacillus sp. m3-13]
Length = 229
Score = 42.6 bits (100), Expect = 0.054, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 10/133 (7%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VI NT ++ +E++S ++ L A + +L T T
Sbjct: 71 LEMGGADFIVICTNTMHKVV-NEIQSKI-TIPLLHIADATAAQIKEKGINSVGLLGTRYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACG--IKIKEDEIKKEIEGCFIEK 187
+ + + + + + + + ++V EE G + D KK I G IE
Sbjct: 129 MEQDFYKSRLEMNGIKVIVPSEQEREIINKVIYEELCLGKIQEKSRDYYKKVIHG-LIES 187
Query: 188 EGKRTDVIVLACT 200
K +L CT
Sbjct: 188 GAKGI---ILGCT 197
>gi|295701003|ref|YP_003608896.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295440216|gb|ADG19385.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 233
Score = 42.6 bits (100), Expect = 0.054, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 24/172 (13%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
D+L++ L I CN+A + RS P + A AA +++L+T
Sbjct: 68 DLLNRNGVGLIAIPCNSAHHWYEPMRARSKAPVLHIAQTCVAAVPRAA----RRVALLAT 123
Query: 129 PATLRRTYTSNLIHSY-------VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
L + + + + + + K D +E
Sbjct: 124 GGALVSGFYQQALADLDIEPVLPDESMQLRVAACIREV---------KAGKLDAAGAHLE 174
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
I + ++ACT PL R ++ P+ +D+S +AR
Sbjct: 175 DVLIALASQGVGTALMACTEIPLAA---RHIASPPLILVDSSLELARATVKY 223
>gi|109896337|ref|YP_659592.1| aspartate racemase [Pseudoalteromonas atlantica T6c]
gi|109698618|gb|ABG38538.1| aspartate racemase [Pseudoalteromonas atlantica T6c]
Length = 232
Score = 42.6 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ +I NT + + +T S+ L A Q + + +L T T
Sbjct: 71 LEHAGVDFIIICTNTMHKVEPEIAAAT--SIPILHIADATGQVLKKDRLKRVGLLGTAFT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + L + + V + D+ ++ + K
Sbjct: 129 MEQDFYESRLATKFGIDVIVPDDDDRAFIHNVIYDELCKGVINDKSRQGYLRIIDKLYAK 188
Query: 191 RTDVIVLACT 200
+ +VL CT
Sbjct: 189 GCEGVVLGCT 198
>gi|302910077|ref|XP_003050212.1| hypothetical protein NECHADRAFT_85108 [Nectria haematococca mpVI
77-13-4]
gi|256731149|gb|EEU44499.1| hypothetical protein NECHADRAFT_85108 [Nectria haematococca mpVI
77-13-4]
Length = 220
Score = 42.6 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 30/106 (28%), Gaps = 3/106 (2%)
Query: 97 STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSS 155
+ + V + +L T T+ + + L + +
Sbjct: 82 EKASQLPLIHIVDPTADRILKAGFKSVGLLGTRFTMEKDFYKSRLEEKFGLSVIVPNEEG 141
Query: 156 MILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
S + C I D +++ E + + ++L CT
Sbjct: 142 KETVHSIIYSELCSGIINNDS-REKYHEIIRELKKAGAECLILGCT 186
>gi|239626800|ref|ZP_04669831.1| aspartate racemase [Clostridiales bacterium 1_7_47_FAA]
gi|239516946|gb|EEQ56812.1| aspartate racemase [Clostridiales bacterium 1_7_47FAA]
Length = 231
Score = 42.6 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 55/158 (34%), Gaps = 13/158 (8%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
L L+ ++ V ++ A NT ++ D+L+ P + + + A A
Sbjct: 58 EELTAYLLAAVRNLAAAGAEVGALSA-NTP-HIVFDQLKKQTP-IPLVSIIEAACGEANR 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ ++ T T++ ++ S + + E+ ++ + ++
Sbjct: 115 RGLTRLGLMGTIFTMKGSFFQRPFEE--SGIQVISPREDEMEYINEKIYTELEFAD--VR 170
Query: 178 KEIEGCFI-----EKEGKRTDVIVLACTHYPL-IVHVF 209
+E + + E ++L CT PL +
Sbjct: 171 EETQEGLVRIIRRMVEEDGIQAVILGCTELPLALNDRI 208
>gi|193077103|gb|ABO11874.2| hydantoin racemase [Acinetobacter baumannii ATCC 17978]
Length = 244
Score = 42.6 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 71/197 (36%), Gaps = 38/197 (19%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+++ ++LD VIAC R S +G A + A+Y
Sbjct: 59 EEIRQ------GELLD---VDAYVIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASY 106
Query: 118 TQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDE 175
+G S+++T T+ ++ +L H Y + V + I VEE
Sbjct: 107 VSTG-FSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRT 160
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARR 229
I+ E + E + D IVL C + + V +D + ++
Sbjct: 161 IRDECKKALAEDKS---DAIVLGC------AGMSDLCLKLQNELG--VIVIDGVAAAVKQ 209
Query: 230 ARCLLPRINTHQTRVFD 246
A +L ++N ++V D
Sbjct: 210 AE-MLVQLNLKTSKVGD 225
>gi|16126276|ref|NP_420840.1| aspartate racemase [Caulobacter crescentus CB15]
gi|221235050|ref|YP_002517486.1| aspartate racemase [Caulobacter crescentus NA1000]
gi|13423508|gb|AAK24008.1| aspartate racemase [Caulobacter crescentus CB15]
gi|220964222|gb|ACL95578.1| aspartate racemase [Caulobacter crescentus NA1000]
Length = 222
Score = 42.6 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 14/141 (9%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + IACNTA +++R++ + + + AA + ++
Sbjct: 59 VLAAMAAGLRDSGAQVLAIACNTAHAYA-EDVRAS--GLPLIDILETAGLAARAQGASVV 115
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T L + + V ++ +VE A +IK ++ + +
Sbjct: 116 GVLGTS--LALGLYRDRFTALG-----LEVVTLDDHEQVEFMALLYRIKRGDVGRASQDA 168
Query: 184 FIEKEGKRTD----VIVLACT 200
+ D +V CT
Sbjct: 169 MAALARRLIDKGAQAVVAGCT 189
>gi|153864530|ref|ZP_01997405.1| aspartate racemase [Beggiatoa sp. SS]
gi|152145974|gb|EDN72594.1| aspartate racemase [Beggiatoa sp. SS]
Length = 216
Score = 42.6 bits (100), Expect = 0.059, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 22/83 (26%)
Query: 70 DILDKYQPVLSVIACNTAFT---LIKDELRSTFPSMAFLGAVPAIKQAAAYTQ------- 119
L+ V+ CNTA ++ +L+ +P I TQ
Sbjct: 79 KFLESAGVDFIVVPCNTAHAFHEQVQSQLQ-----------IPWIHLIDCTTQFLVDNYQ 127
Query: 120 -SGLISILSTPATLRRTYTSNLI 141
+ + IL+T TL+ N +
Sbjct: 128 DTKKVGILATDGTLQSQLYHNSL 150
>gi|225017475|ref|ZP_03706667.1| hypothetical protein CLOSTMETH_01402 [Clostridium methylpentosum
DSM 5476]
gi|224949714|gb|EEG30923.1| hypothetical protein CLOSTMETH_01402 [Clostridium methylpentosum
DSM 5476]
Length = 239
Score = 42.6 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 29/102 (28%), Gaps = 8/102 (7%)
Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR 161
+ FL V IL+T T+ + + ++ I +
Sbjct: 99 VPFLNMVAETVAHLKQNGVKRAGILATTGTIHTQLFQKELEKQGLE---WVIPCEIGQEQ 155
Query: 162 VEEYACGIKIKEDEIKKEIEGCFI---EKEGKRTDVIVLACT 200
V + E++ + + + ++L CT
Sbjct: 156 VMHLIYNNVKAGQPV--ELDRFELVSSKLREAGAECLILGCT 195
>gi|229164447|ref|ZP_04292374.1| Aspartate racemase [Bacillus cereus R309803]
gi|228619020|gb|EEK75919.1| Aspartate racemase [Bacillus cereus R309803]
Length = 238
Score = 42.6 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 11/158 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L VIACNTA + ++ L + + +L+T T
Sbjct: 75 LQNAGADFLVIACNTA--HFFYKAVKRSVNIPILHMPLETARFVQENNFRKVGLLATDGT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGK 190
++ N + + + +V + IK + +K +
Sbjct: 133 IKTELYQNSCQ--NCRIDVIE-PDKEMQKKVMKGIYAIKSGNLKTGCLYLSMVADKLKES 189
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ I+ CT PL++ + ++ ++ +A+
Sbjct: 190 GAEAIIAGCTEVPLVLKS-----SKNICVINPTEIVAK 222
>gi|300789528|ref|YP_003769819.1| aspartate racemase [Amycolatopsis mediterranei U32]
gi|299799042|gb|ADJ49417.1| aspartate racemase [Amycolatopsis mediterranei U32]
Length = 240
Score = 42.6 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 11/97 (11%), Positives = 30/97 (30%), Gaps = 7/97 (7%)
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ +L T T+ + + + + ++ + L R+ + + + E ++
Sbjct: 117 VRRVGLLGTGFTMGQPFYRDRLAAHGLDVLVPSAEDRDLVHRIIYDELVLGVVKPESREA 176
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP 216
G G + ++ CT L
Sbjct: 177 YRGVIARLAGAGAEGVIYGCT-------EIELLVGPQ 206
>gi|86156956|ref|YP_463741.1| aspartate racemase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773467|gb|ABC80304.1| Aspartate racemase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 234
Score = 42.6 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 9/132 (6%)
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151
LR P + V A ++ ++ T T+ + + + + +
Sbjct: 91 LAALRPRSP-LPIADLVGATCDDVRAAGHRVVGLVGTRFTVSEPFFREALEAAGVRVVVP 149
Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIVHVFR 210
+ + K E+K E+ G+ D +V+ACT
Sbjct: 150 DEAGTDYLDALIFGPLARGEKTPEMKGELAAIVGRMAGRAPLDALVVACT-------DLM 202
Query: 211 QLSPWPVDWLDN 222
L V LD
Sbjct: 203 DLMGTEVRLLDP 214
>gi|332143389|ref|YP_004429127.1| aspartate racemase [Alteromonas macleodii str. 'Deep ecotype']
gi|327553411|gb|AEB00130.1| aspartate racemase [Alteromonas macleodii str. 'Deep ecotype']
Length = 231
Score = 42.6 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 49/152 (32%), Gaps = 12/152 (7%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+W ++ + L+ VI NT + D + S+ + A
Sbjct: 55 GDWSK---TADILTQEARNLELAGAKALVICTNTMHKVA-DTIEQNI-SVPLIHIADATG 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+ +L T T+ + + + I + +I +++ + ++
Sbjct: 110 NELQQHSVKKVGLLGTRFTMEQPFYRSRIE---NNFNIDVITPNARQRDIVHKIIYEQLC 166
Query: 173 EDEI----KKEIEGCFIEKEGKRTDVIVLACT 200
+ I + GK + I+L CT
Sbjct: 167 KGVICVDSRNAYIEIINALAGKGAEGIILGCT 198
>gi|283955529|ref|ZP_06373024.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
1336]
gi|283792990|gb|EFC31764.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
1336]
Length = 231
Score = 42.6 bits (100), Expect = 0.065, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +IA NT + DE++ ++ L + +A
Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L T T+ + + LI +S I+ + C KIK+D +K +
Sbjct: 119 KIGLLGTKYTMTQDFYKKILIEENISVITPSDEDIKIVNDIIFNELCKGKIKQDSKEKYL 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + K ++LACT
Sbjct: 179 -NIIKKLQEKGAKGVLLACT 197
>gi|170750685|ref|YP_001756945.1| aspartate racemase [Methylobacterium radiotolerans JCM 2831]
gi|170657207|gb|ACB26262.1| aspartate racemase [Methylobacterium radiotolerans JCM 2831]
Length = 250
Score = 42.6 bits (100), Expect = 0.065, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 43/138 (31%), Gaps = 13/138 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS---------GL 122
L+ I CNTA ++ L V A+ + A T++ G
Sbjct: 68 LEAGGATRIAIPCNTA--HHWHAALQAGTALPILHIVDAVAETLARTETETGIAAGTGGR 125
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T TLR + C + ++ E + +E
Sbjct: 126 VGLLATDGTLRTGLYRERLARRGLTCLGPDPEGQAAVAAAIRLVKAHRVAEA--RPLLEA 183
Query: 183 CFIEKEGKRTDVIVLACT 200
D +V+ACT
Sbjct: 184 QVRALAEAGCDRVVMACT 201
>gi|154148024|ref|YP_001406048.1| aspartate racemase [Campylobacter hominis ATCC BAA-381]
gi|153804033|gb|ABS51040.1| aspartate racemase [Campylobacter hominis ATCC BAA-381]
Length = 226
Score = 42.6 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 60/169 (35%), Gaps = 28/169 (16%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA----VPAIKQAAAYTQSGLISILS 127
L + +ACNTA D L + L V AIK+ Y +++LS
Sbjct: 70 LKQSGCDAFCMACNTA-HFFADRLVEQ-SGLPILHIAKITVNAIKK--EYKNVKKVAVLS 125
Query: 128 TPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKE-----DEIKKEIE 181
T T + N + I ++ L S + + KI++ EI EI+
Sbjct: 126 TIGTQKAGIYDNELKKNGFLTADISQIAMKKLMSCIYDGVKAGKIEDFVPKFKEILNEID 185
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
D+ + ACT PL + +D ++ +A+
Sbjct: 186 A----------DIYIAACTEIPLFLPYI----GDDKIIIDATNELAKEI 220
>gi|328955321|ref|YP_004372654.1| aspartate racemase [Coriobacterium glomerans PW2]
gi|328455645|gb|AEB06839.1| aspartate racemase [Coriobacterium glomerans PW2]
Length = 250
Score = 42.2 bits (99), Expect = 0.066, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 43/148 (29%), Gaps = 23/148 (15%)
Query: 72 LDKYQPVLSVIACNT---------AFTLI--KDELRS--TFPSMAFLG----AVPAIKQA 114
L+ I CNT A T + +R + L PA
Sbjct: 71 LESLGCANIAIPCNTSHYYYDQIRASTNVPIIHMVREAVRYAVFGVLPDTASIDPACAPR 130
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRV-EEYACGIKIK 172
A I I++T T+ ++ V + S + ++ G
Sbjct: 131 APRMPPRRIGIMATDGTIMSGVYHRACRAFGVEPIEPDESRQRDVMSLIYDDVKAGRDPD 190
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200
D+ + + D ++LACT
Sbjct: 191 MDKFDRVVRA----FRADGCDRVILACT 214
>gi|299770526|ref|YP_003732552.1| Hydantoin racemase [Acinetobacter sp. DR1]
gi|298700614|gb|ADI91179.1| Hydantoin racemase [Acinetobacter sp. DR1]
Length = 244
Score = 42.2 bits (99), Expect = 0.066, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 69/197 (35%), Gaps = 38/197 (19%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+++ + L VIAC R S +G A + A+Y
Sbjct: 59 EEIRQ------GEFL---GVDAYVIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASY 106
Query: 118 TQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDE 175
+G S+++T T+ ++ +L H Y + V + I VEE
Sbjct: 107 VSTG-FSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRT 160
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARR 229
I+ E + E + D IVL C + + V +D + ++
Sbjct: 161 IRDECKKALAEDKS---DAIVLGC------AGMSDLCLKLQNELG--VIVIDGVAAAVKQ 209
Query: 230 ARCLLPRINTHQTRVFD 246
A +L ++N ++V D
Sbjct: 210 AE-MLVQLNLKTSKVGD 225
>gi|255523215|ref|ZP_05390186.1| aspartate racemase [Clostridium carboxidivorans P7]
gi|296186180|ref|ZP_06854585.1| aspartate racemase [Clostridium carboxidivorans P7]
gi|255513083|gb|EET89352.1| aspartate racemase [Clostridium carboxidivorans P7]
gi|296049448|gb|EFG88877.1| aspartate racemase [Clostridium carboxidivorans P7]
Length = 231
Score = 42.2 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 50/156 (32%), Gaps = 12/156 (7%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQ 113
L ++ + + D VI NT A + + L A +
Sbjct: 58 EELTDIMVNIAKKLKDAGA-DFIVICTNTMHKMANAI------ENRVGIKVLHIAEATGE 110
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+++L T T+++ + ++ + I + + + I
Sbjct: 111 KVIDNGLKKVALLGTIFTMKQDFYKKVLKEKFNIDVIIPNEADSEIVHEIIYTELCKGII 170
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
+ K++ + E + ++L CT PL++
Sbjct: 171 NESSKEKYKKIIKNLELNGAEGVILGCTEIPLLIKQ 206
>gi|212712021|ref|ZP_03320149.1| hypothetical protein PROVALCAL_03097 [Providencia alcalifaciens DSM
30120]
gi|212685543|gb|EEB45071.1| hypothetical protein PROVALCAL_03097 [Providencia alcalifaciens DSM
30120]
Length = 231
Score = 42.2 bits (99), Expect = 0.070, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 40/130 (30%), Gaps = 3/130 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ NT + ++ + FL A + + I +L T T
Sbjct: 71 LKAAGADFLVLCTNTMHKVA-PQIEEK-SKLPFLHIADATGEKITQSGIKTIGLLGTAFT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + L + + + + + + + I D E +
Sbjct: 129 MEQAFYKDRLTDKFNLRVITPNEADRKIVHDIIYHELCLGIISDTSHTEYQRIMKTLVEH 188
Query: 191 RTDVIVLACT 200
+ I+L CT
Sbjct: 189 GAEGIILGCT 198
>gi|218508038|ref|ZP_03505916.1| probable hydantoin racemase protein [Rhizobium etli Brasil 5]
Length = 247
Score = 42.2 bits (99), Expect = 0.071, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 32/177 (18%)
Query: 67 LFSDILDKYQP--VLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLI 123
L S++ ++ +VIAC + RS F + LG AI A Q +
Sbjct: 57 LLSELKERQAAGYDAAVIAC--FDDTGLEAARS-FADVPILGLCESAIATAGFLAQRFTV 113
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
T R NL+ Y + +S I +EE A G +++ EIE
Sbjct: 114 ---VTTLERSRVLIDNLVRRYGMGARAKVRASDIPVLELEEAASGAI---GKLRAEIERA 167
Query: 184 FIEKEGKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDN---------SDSIAR 228
E + IVL C T + +++ V +D +AR
Sbjct: 168 LEE---DGAEAIVLGCAGMT---DLARQLQEIYG--VPVVDGVSAAVQAGRGAGLAR 216
>gi|332141686|ref|YP_004427424.1| aspartate racemase [Alteromonas macleodii str. 'Deep ecotype']
gi|327551708|gb|AEA98426.1| aspartate racemase [Alteromonas macleodii str. 'Deep ecotype']
Length = 231
Score = 42.2 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 49/152 (32%), Gaps = 12/152 (7%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+W ++ + L+ VI NT + D + S+ + A
Sbjct: 55 GDWSK---TADILTQEARNLELAGAKALVICTNTMHKVA-DTIEQNI-SVPLIHIADATG 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+ +L T T+ + + + I + +I +++ + ++
Sbjct: 110 NELQQHGVKKVGLLGTRFTMEQPFYWSRIE---NNFNIDVITPNAQQRDIVHKIIYEQLC 166
Query: 173 EDEI----KKEIEGCFIEKEGKRTDVIVLACT 200
+ I + GK + I+L CT
Sbjct: 167 KGVICVDSRNAYIEIIDALAGKGAEGIILGCT 198
>gi|183598906|ref|ZP_02960399.1| hypothetical protein PROSTU_02344 [Providencia stuartii ATCC 25827]
gi|188021116|gb|EDU59156.1| hypothetical protein PROSTU_02344 [Providencia stuartii ATCC 25827]
Length = 231
Score = 42.2 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 5/144 (3%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
L + + +++ V+ NT + + ++ L A + +
Sbjct: 58 ELAGQYLAQAGKNVEQASADFVVLCTNTMHKVAEQI--ENNINIPLLHIADATGERIINS 115
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKEDEI 176
I +L T T+ + + + +H + + I+ + + C KI
Sbjct: 116 GIRKIGLLGTAFTMEQPFYKDRLHEKYNLSVLTPNDQDRKIVHDIIYQELCLGKITTGS- 174
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
KK+ + + I+L CT
Sbjct: 175 KKQYQRIMASLVENGAEGIILGCT 198
>gi|319935192|ref|ZP_08009631.1| aspartate racemase [Coprobacillus sp. 29_1]
gi|319809842|gb|EFW06230.1| aspartate racemase [Coprobacillus sp. 29_1]
Length = 238
Score = 42.2 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 47/139 (33%), Gaps = 2/139 (1%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
R++ + L+K I NT ++ L + + A Q
Sbjct: 61 ARILTEAAQSLEKAGADYICICTNTMHKVV--TLIQQGIHIPIIHIAEATAQKLQQEHIQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++L T T+ + + + + S + + + + + + ++ K++
Sbjct: 119 KVALLGTKYTMTQMFYKQKLIDAKIDVLVPSESDIEIVNNIIYNELCLGVISNDSKEKYI 178
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 179 KIIKDLVLQGAQGVILGCT 197
>gi|229590471|ref|YP_002872590.1| putative aspartate racemase [Pseudomonas fluorescens SBW25]
gi|229362337|emb|CAY49239.1| putative aspartate racemase [Pseudomonas fluorescens SBW25]
Length = 230
Score = 42.2 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 8/140 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L V+ NT L+ + + S+ FL A AA + +
Sbjct: 63 ILEDAARRLQAGGAECVVLCTNTM-HLVAPRIEAAV-SIPFLHIADAAGAAAVDAGTLTV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQ---CHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+L T T+ + + LI +Q + + R+ + + D ++
Sbjct: 121 GLLGTAFTMEQDF---LISRLAAQGLTVLVPEADARQAVHRIIYEELCVGVISDTSRQVY 177
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 178 QRVIESLAARGAQAIILGCT 197
>gi|10121334|gb|AAG13133.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 42.2 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI P P + + D+I + F
Sbjct: 1 GCTHFPLIAQKIEGYFMEHFALPTPPLLIHSGDAIVGYLQQ--KYALKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVIWLEKQAKEWL 74
>gi|89896850|ref|YP_520337.1| hypothetical protein DSY4104 [Desulfitobacterium hafniense Y51]
gi|89336298|dbj|BAE85893.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 231
Score = 42.2 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 5/148 (3%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G WE ++ + L+ V+ NT + DE+++ + L
Sbjct: 55 GEWEKA---AEILANAAGSLEAAGAEFIVLCTNTMHKVA-DEIQAGL-QIPLLHIADMTA 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
Q A I +L T T+ + + + + + + + + V + I
Sbjct: 110 QQALTNNIRTIGLLGTRYTMEQDFYRSRLEAQGIKVLTPEEGDKAVVNEVIYQELCLGII 169
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200
E + + + + + IVL CT
Sbjct: 170 NQESRNQFKRIIADLVEQGAQGIVLGCT 197
>gi|257468637|ref|ZP_05632731.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
gi|317062894|ref|ZP_07927379.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688570|gb|EFS25405.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 235
Score = 42.2 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 25/173 (14%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQS-G 121
M ++ L K +I NTA DE+ S + FL + A+K+
Sbjct: 64 AMVATAENLKKAGADFIIIGANTA-HYFYDEVASQV-DIPFLHIIDEAVKEMMRQVPGIK 121
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIK---IKEDEIK 177
+ +++T A ++ + I ++++ ++V + K + E +K
Sbjct: 122 KVGVMATNAAVKIKLYDKCCAKFG----IEVIAAKEEVQNKVHDTIFDFKYNGVTEKNVK 177
Query: 178 KE--IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSI 226
FIE + +++ CT P+I+ V +D +D I
Sbjct: 178 DATDCAEYFIE---NGAEALIMGCTEIPIILK------GKSFTVPLIDPNDII 221
>gi|311694294|gb|ADP97167.1| aspartate racemase [marine bacterium HP15]
Length = 231
Score = 42.2 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ K VI NT + + ++ + L A Q +L T T
Sbjct: 71 VQKAGADFLVIGTNTMHKVAPEIEQA--IGIPLLHIADATAQLLKKEGVTRAGLLGTRFT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + + S RV EE G + + G
Sbjct: 129 MEQAFYRERLEAAGIDVLTPDESQRDEVHRVIYEELCQGEIKPDS--RHTYLDIVSSLSG 186
Query: 190 KRTDVIVLACT 200
+ ++L CT
Sbjct: 187 RGAQAVILGCT 197
>gi|313897176|ref|ZP_07830720.1| aspartate racemase [Clostridium sp. HGF2]
gi|312957897|gb|EFR39521.1| aspartate racemase [Clostridium sp. HGF2]
Length = 236
Score = 42.2 bits (99), Expect = 0.077, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 49/139 (35%), Gaps = 6/139 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+ +I NT + ++ + + A + +
Sbjct: 63 ILGKAAQGLEAAGADFILICTNTMHKVAPQI--ASMIHIPIIHIADATAEELLNHNIHKV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA--SRVEEYACGIKIKEDEIKKEIE 181
+L T T+ + + + + + ++ I + C +IKED +K+ +
Sbjct: 121 GLLGTKYTMTQDFYKQKLVERGIEVIVPE-ATEIEVINHIIFHELCVGQIKEDS-RKKFQ 178
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ + + ++L CT
Sbjct: 179 SIIERMKSRGAEGVILGCT 197
>gi|269104255|ref|ZP_06156951.1| aspartate racemase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268160895|gb|EEZ39392.1| aspartate racemase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 353
Score = 42.2 bits (99), Expect = 0.078, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 71/190 (37%), Gaps = 19/190 (10%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSV-IACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115
L+K ++ L +Y V + +ACN+A + R+ P + + + +
Sbjct: 62 ELRKYATATYTLRLMQYLDVKVMGLACNSA----HELFRTILPQIPVHFVDMIKQTAASL 117
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKE- 173
++ I ++ + + + + V L + + + GIK +
Sbjct: 118 EGSED-TILVMGVNSLVDSGLYQSALADQGVKSTKPSLENQQKVMDAIYHPEFGIKTAKI 176
Query: 174 -DEIKKEIEGCFIEKEGKRTDV-IVLACTHYPL-IVHV----FRQ--LSPWPVDWLDNSD 224
+ ++ + ++ K+ IVL CT PL + F+Q L P + +D S
Sbjct: 177 TPQAEQLLCEVICDELAKQGCTKIVLGCTELPLALTAESCLRFKQQGLLPPEITVIDASM 236
Query: 225 SIARRARCLL 234
+A+ L
Sbjct: 237 VLAQSLISTL 246
>gi|238927053|ref|ZP_04658813.1| aspartate racemase [Selenomonas flueggei ATCC 43531]
gi|238885033|gb|EEQ48671.1| aspartate racemase [Selenomonas flueggei ATCC 43531]
Length = 230
Score = 42.2 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 42/214 (19%)
Query: 12 LQNSILIFDSGIGGLI---------VLQK-MRFLMPEYH----FIYVADDVGFPYGNWED 57
+ +I + IGG+ V+ + ++ + H +Y D
Sbjct: 1 MMKTIGL----IGGMSWESTVTYYQVINETIKKQLGGLHSAKCILYSVD----------F 46
Query: 58 HALKKR-----------LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG 106
++K ++ + L++ VI NT + + R + L
Sbjct: 47 DEIEKYQASGEWDKSADVLSEAAQALERAGADYIVICTNTMHKVTPEIGRRIH--IPILH 104
Query: 107 AVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166
+ +L T T+++ + N++ + I ++ + +
Sbjct: 105 IADMTAVQLKKHGIRKVGLLGTKYTMQQDFYKNVLIRQGIEVIIPNDDVDVVNRIIYDEL 164
Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
C KI E+ K E I+L CT
Sbjct: 165 CLGKILEES-KAVYLDIIHELARNGAQGIILGCT 197
>gi|157414398|ref|YP_001481654.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
81116]
gi|157385362|gb|ABV51677.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
81116]
gi|307747042|gb|ADN90312.1| Putative aspartate racemase [Campylobacter jejuni subsp. jejuni M1]
Length = 231
Score = 42.2 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +IA NT + DE++ ++ L + +A
Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L T T+ + + LI +S I+ + C +IK+D +K +
Sbjct: 119 KIGLLGTKYTMTQDFYKKILIEENISVITPSDEDIKIVNDIIFNELCKGEIKQDSKEKYL 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + K ++LACT
Sbjct: 179 -NIINKLQEKGAKGVLLACT 197
>gi|253582891|ref|ZP_04860109.1| aspartate racemase subfamily protein [Fusobacterium varium ATCC
27725]
gi|251835097|gb|EES63640.1| aspartate racemase subfamily protein [Fusobacterium varium ATCC
27725]
Length = 235
Score = 42.2 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 23/172 (13%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GL 122
M ++ L K +I NTA DE+ S A+K+
Sbjct: 64 AMVATAENLKKAGADFIIIGANTA-HYFYDEVASQVDIPFLHIIEEAVKEMMRQVPGIKK 122
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIK---IKEDEIKK 178
+ +++T A ++ + I ++++ ++V + K + E +K
Sbjct: 123 VGVMATNAAVKIKLYDKCCAKFG----IEVIAAKEDVQNKVHDTIFDFKYNGVTEKNVKD 178
Query: 179 E--IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSI 226
FIE + +++ CT P+I+ V +D +D I
Sbjct: 179 ATDCAEYFIE---NGAEALIMGCTEIPIILK------GKSFTVPLIDPNDII 221
>gi|238064313|ref|ZP_04609022.1| aspartate/glutamate racemase [Micromonospora sp. ATCC 39149]
gi|237886124|gb|EEP74952.1| aspartate/glutamate racemase [Micromonospora sp. ATCC 39149]
Length = 240
Score = 42.2 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 12/110 (10%), Positives = 37/110 (33%), Gaps = 1/110 (0%)
Query: 91 IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHI 150
+ D++++ S+ L A +A + +L T T+ + + + + + + +
Sbjct: 89 VADQVQAAV-SIPLLHLGDATAEAVTAAGLHTVGLLGTAFTMEQAFYRDRLARHGLRVIV 147
Query: 151 HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
R+ + + ++ + ++L CT
Sbjct: 148 PEPDDRAEVHRIIYDELCLGEVREASRQTYQKVIERLVRSGAQGVILGCT 197
>gi|291165619|gb|EFE27668.1| aspartate racemase [Filifactor alocis ATCC 35896]
Length = 233
Score = 42.2 bits (99), Expect = 0.081, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 14/136 (10%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTP 129
L++ V+ CNTA DE++ K+ + + ++++ST
Sbjct: 72 FLEESGAEFLVMPCNTA-HYFYDEIKKHIHIPFLHIVEETTKEILKHKDTVHKVALISTT 130
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLV-----SSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
T + + Q + L+ ++ + G D + K ++
Sbjct: 131 GTYSCGLYQDA---FAKQKDVDLLLPDEDGKSLIMDMLYAIKSGQPKNPDALMKLLDD-- 185
Query: 185 IEKEGKRTDVIVLACT 200
++G + D + L CT
Sbjct: 186 FMQQGAQ-DFL-LGCT 199
>gi|161508037|ref|YP_001578004.1| aspartate racemase [Lactobacillus helveticus DPC 4571]
gi|160349026|gb|ABX27700.1| Aspartate racemase [Lactobacillus helveticus DPC 4571]
gi|323467272|gb|ADX70959.1| Aspartate racemase [Lactobacillus helveticus H10]
gi|323467315|gb|ADX71002.1| Aspartate racemase [Lactobacillus helveticus H10]
Length = 249
Score = 42.2 bits (99), Expect = 0.081, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 15/135 (11%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127
DK V+ CNTA D+L + FL ++ A Y I +++
Sbjct: 73 DKLGTDFLVMPCNTA-HYFYDDL-AALTDKPFLHM---MRIAVHNFIDNYPDEKKIGLIA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186
T ++ ++ I + + V E ++ + ++
Sbjct: 128 TEGSIYDHLYADEIQKVGRTVE---LGGPEIQPMVNELIYSDIKEKGIVDHDLYHKILKT 184
Query: 187 KEGK-RTDVIVLACT 200
K +VI+L CT
Sbjct: 185 MHDKYGCNVILLGCT 199
>gi|264679908|ref|YP_003279817.1| aspartate racemase [Comamonas testosteroni CNB-2]
gi|262210423|gb|ACY34521.1| aspartate racemase [Comamonas testosteroni CNB-2]
Length = 242
Score = 42.2 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 5/103 (4%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159
S+ FL + A ++ +L T T+ + + L + + + +
Sbjct: 109 SIPFLHIADPVGATARAAGVQVLGLLGTRFTMEQPFMRERLEQQFGLKVLVPGEAERAQV 168
Query: 160 SRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
R+ EE G D +K + + +VL CT
Sbjct: 169 HRIIYEELCAGQI--SDVSRKLYQRAIESLAARGAQAVVLGCT 209
>gi|67902860|ref|XP_681686.1| hypothetical protein AN8417.2 [Aspergillus nidulans FGSC A4]
gi|40747883|gb|EAA67039.1| hypothetical protein AN8417.2 [Aspergillus nidulans FGSC A4]
gi|259484353|tpe|CBF80499.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 627
Score = 42.2 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 47/157 (29%), Gaps = 18/157 (11%)
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHI 150
LR + +G + A AA T G I+ T + R + I Y +
Sbjct: 466 IKALREELTT-PVVGIMEASLFAAR-TLGGRFGIVVTSS--RSGVLHTDSIRRYGYEGFS 521
Query: 151 HLVSSMILASR-VEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC---THYPLIV 206
V S L +E E E+ + G + + DVI L C T +
Sbjct: 522 IGVESCGLGVLGLERK------GEQEVLDAMCGAARKLVERGADVITLGCAGMT---KLK 572
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ + +D + LL R
Sbjct: 573 EAVEEAVGPEIQVVDGVVAGVHHLIGLLRMGGRTAKR 609
>gi|300362911|ref|ZP_07059081.1| aspartate racemase [Lactobacillus gasseri JV-V03]
gi|300352961|gb|EFJ68839.1| aspartate racemase [Lactobacillus gasseri JV-V03]
Length = 249
Score = 42.2 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 9/132 (6%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPA 130
K P V+ CNTA D+L + + FL + K + + I +++T
Sbjct: 73 AKLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHMMRIAVHKFVDDFPKEEKIGLIATEG 130
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIEKEG 189
++ + + + + + V E ++ + ++
Sbjct: 131 SIYDHLYVDELERVGKKVE---LGGPEIQPMVNELIYSDIKEKGIVDHDLYHKILKTMHD 187
Query: 190 K-RTDVIVLACT 200
K +VI+L CT
Sbjct: 188 KYGCNVILLGCT 199
>gi|260555327|ref|ZP_05827548.1| hydantoin-racemase [Acinetobacter baumannii ATCC 19606]
gi|260411869|gb|EEX05166.1| hydantoin-racemase [Acinetobacter baumannii ATCC 19606]
Length = 244
Score = 42.2 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 77/220 (35%), Gaps = 41/220 (18%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+++ ++LD VIAC R S +G A + A+Y
Sbjct: 59 EEIRQ------GELLD---VDAYVIAC--FGDPALYAAREM-TSAPVIGIAEAAMRTASY 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEI 176
+G + + T+ ++ +L H Y + V + I VEE I
Sbjct: 107 VSTGFSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDAYRTI 161
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRA 230
+ E + E + D IVL C + + V +D + ++A
Sbjct: 162 RDECKKALAEDKS---DAIVLGC------AGMSDLCLKLQNEL--EVIVIDGVAAAVKQA 210
Query: 231 RCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+L ++N ++V D + P ++ GFG++
Sbjct: 211 E-MLVQLNLKTSKVGD-----WASPPVKNYTGILSGFGVR 244
>gi|52143230|ref|YP_083598.1| aspartate racemase [Bacillus cereus E33L]
gi|51976699|gb|AAU18249.1| aspartate racemase [Bacillus cereus E33L]
Length = 232
Score = 42.2 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 10/133 (7%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ + ++ + L A + + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-ERIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY----ACGIKIKEDEIKKEIEGCFIEK 187
+ + + I + + +V S ++ E C KI ++ +
Sbjct: 129 MEQDFYKIRIEE--NHIKV-MVPSEKDRDKINEVIYTELCLGKITSQS-REYYKRVIENL 184
Query: 188 EGKRTDVIVLACT 200
+ I+L CT
Sbjct: 185 IQEGAQGIILGCT 197
>gi|83643337|ref|YP_431772.1| aspartate racemase [Hahella chejuensis KCTC 2396]
gi|83631380|gb|ABC27347.1| Aspartate racemase [Hahella chejuensis KCTC 2396]
Length = 230
Score = 41.9 bits (98), Expect = 0.089, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 9/133 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ +IA NT + + R ++ L A +++L T T
Sbjct: 71 LERAGAQAMLIATNTMHKVAPEVERRL--TIPLLHIADAAADELQRNGHKKVALLGTRYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILAS----RVEEYACGIKIKEDEIKKEIEGCFIEK 187
++ + IH + + S EE G + +
Sbjct: 129 MQLDFYKTRIHD-ATGIAVITPESAQQEEINRIIYEELCRGELLPSS--RDFYYRVIENL 185
Query: 188 EGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 186 ASQGAEGVILGCT 198
>gi|239831308|ref|ZP_04679637.1| aspartate racemase [Ochrobactrum intermedium LMG 3301]
gi|239823575|gb|EEQ95143.1| aspartate racemase [Ochrobactrum intermedium LMG 3301]
Length = 274
Score = 41.9 bits (98), Expect = 0.090, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 42/138 (30%), Gaps = 3/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
LM + L++ +I NT + D + S+ + + +
Sbjct: 105 LMIEAAQNLERGGADFILICTNTMHKMADDI--ESATSIPLVHIADPTAEKIKAAGLSKV 162
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T+ + + L + + + + + D +++
Sbjct: 163 GLLGTAFTMEQDFYKGRLAAKHGLEVLTPDDADRKTVHDIIYQELVVGEVRDASREKYRA 222
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 223 VINRLVRRGAEAIILGCT 240
>gi|90414492|ref|ZP_01222467.1| hypothetical aspartate racemase [Photobacterium profundum 3TCK]
gi|90324400|gb|EAS40962.1| hypothetical aspartate racemase [Photobacterium profundum 3TCK]
Length = 236
Score = 41.9 bits (98), Expect = 0.091, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 49/138 (35%), Gaps = 6/138 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + L + V+ CNTA L ++ ++ + + ++ A + + +
Sbjct: 63 ALKQGMEQLQQAGAECIVMPCNTA-HYWYTRLTNSC-NVHTISIIDSVVSEAKHRRYQTV 120
Query: 124 SILSTPAT-LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+T AT + Y + L ++ + + + G ++ +
Sbjct: 121 GLLATTATMMAGMYQTKLAQQQINAIETTDSEQQAIMNGIYAVKAGNVEHGKQLM---QP 177
Query: 183 CFIEKEGKRTDVIVLACT 200
F + + ++ CT
Sbjct: 178 VFEAMLNRGAEAVIFGCT 195
>gi|257460061|ref|ZP_05625165.1| aspartate racemase [Campylobacter gracilis RM3268]
gi|257442502|gb|EEV17641.1| aspartate racemase [Campylobacter gracilis RM3268]
Length = 226
Score = 41.9 bits (98), Expect = 0.092, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 64/206 (31%), Gaps = 35/206 (16%)
Query: 45 ADDVGFPYGNWEDHALKKRLMFLFSDI-------------LDKYQPVLSVIACNTAFTLI 91
D P ++ R F+ L +ACNTA
Sbjct: 30 GDQENIPLVIDSYPQIEDRTAFILGKGENPLPRLSESAVRLKNAGCRAFAMACNTA-HFF 88
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGL-ISILSTPATLRRTYTSNLIHSYVSQCHI 150
D++ + A +K + I++L+T T + + +
Sbjct: 89 ADDVEAAAEIPLIHIAEVTVKAIRKNYPNAHKIAVLATIGTKKAKIYDDPLKE------- 141
Query: 151 HLVSSMILASRVEEY-----ACGIKIKEDEIKKEIEGCFIEKEGK-RTDVIVLACTHYPL 204
+ +I EE C K + E G F GK D+ V+ACT PL
Sbjct: 142 ---AGLISVDLGEENQAVLMDCIYKGVKAGKTAEYVGAFENLLGKIDADIYVVACTELPL 198
Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + + ++D + +A+
Sbjct: 199 FLPLIK----SDKIFVDPTRELAKAI 220
>gi|325285294|ref|YP_004261084.1| aspartate racemase [Cellulophaga lytica DSM 7489]
gi|324320748|gb|ADY28213.1| aspartate racemase [Cellulophaga lytica DSM 7489]
Length = 254
Score = 41.9 bits (98), Expect = 0.093, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 51/150 (34%), Gaps = 17/150 (11%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ + + ++ + I CNTA LI+ + + + + + A +
Sbjct: 67 ISEIIATLIASGS-NIIAIPCNTAHAKPIFNLIEKSIPESCILVNLIE-EVGLYIATKHP 124
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS---SMILA-SRVEEYACGIKIKED 174
+ + +L T T+ +++ Y + S + + + GIK +
Sbjct: 125 EITRVGVLGTTGTILAKVYPDVLAKYN--IEVIQPSEDIQNLFVHPSIYDANYGIKAFSN 182
Query: 175 EIKKEIEGCFIE----KEGKRTDVIVLACT 200
+ ++ + K ++L CT
Sbjct: 183 PVNQKAKENLSMAATYLSRKGAQAVILGCT 212
>gi|317486428|ref|ZP_07945255.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
gi|316922338|gb|EFV43597.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
Length = 238
Score = 41.9 bits (98), Expect = 0.093, Method: Composition-based stats.
Identities = 16/137 (11%), Positives = 39/137 (28%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
L+ + L++ +I NT + + S+ L +
Sbjct: 63 LLAEAARGLERAGADCVLICTNTMHKVA--DAVQAATSLPLLHIAELTADELEAAGVSTV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + + I +RV + + ++
Sbjct: 121 GLLGTRYTMEQDFYTRKLVERGITVLIPEEDGRAFVNRVIFDELCLGTVSESSRRAFAAI 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 181 IGGLTARGAQGVILGCT 197
>gi|54309523|ref|YP_130543.1| aspartate racemase [Photobacterium profundum SS9]
gi|46913959|emb|CAG20741.1| hypothetical aspartate racemase [Photobacterium profundum SS9]
Length = 226
Score = 41.9 bits (98), Expect = 0.093, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 49/138 (35%), Gaps = 6/138 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + L + V+ CNTA L ++ ++ + + ++ A + + +
Sbjct: 53 ALKEGMEQLQQAGAECIVMPCNTA-HYWYTRLTNSC-NVHTISIIDSVVDEAKHRRYRTV 110
Query: 124 SILSTPAT-LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L+T AT + Y + L ++ + + + G ++ +
Sbjct: 111 GLLATTATMMAGMYQTKLAQQQINAIETTDSEQQAIMNGIYAVKAGNVEHGKQLM---QP 167
Query: 183 CFIEKEGKRTDVIVLACT 200
F + + ++ CT
Sbjct: 168 VFEAMLNRGAEAVIFGCT 185
>gi|229196449|ref|ZP_04323195.1| hypothetical protein bcere0001_20080 [Bacillus cereus m1293]
gi|228587019|gb|EEK45091.1| hypothetical protein bcere0001_20080 [Bacillus cereus m1293]
Length = 235
Score = 41.9 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +I NT + ++++ + L A + + +L T T
Sbjct: 74 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 131
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + L + + V E I + E K + ++K
Sbjct: 132 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 191
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 192 AQGI---ILGCT 200
>gi|324326258|gb|ADY21518.1| aspartate racemase family protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 232
Score = 41.9 bits (98), Expect = 0.098, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +I NT + ++++ + L A + + +L T T
Sbjct: 71 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + L + + V E I + E K + ++K
Sbjct: 129 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 188
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 189 AQGI---ILGCT 197
>gi|47570153|ref|ZP_00240809.1| aspartate racemase [Bacillus cereus G9241]
gi|47553172|gb|EAL11567.1| aspartate racemase [Bacillus cereus G9241]
Length = 232
Score = 41.9 bits (98), Expect = 0.098, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +I NT + ++++ + L A + + +L T T
Sbjct: 71 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + L + + V E I + E K + ++K
Sbjct: 129 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 188
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 189 AQGI---ILGCT 197
>gi|283955428|ref|ZP_06372926.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
414]
gi|283793055|gb|EFC31826.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
414]
Length = 227
Score = 41.9 bits (98), Expect = 0.099, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 53/140 (37%), Gaps = 4/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +I NT + DE++ + ++ L + +A
Sbjct: 61 AQILSECAKKLELAGVDFIIITTNTM-HKVFDEIQKSI-NIPVLHIAKSTAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEI 180
+ +L T T+ + + ++ I + + + C +IK++ +K +
Sbjct: 119 KVGLLGTKYTMTQDFYKKILEEENISTIIPSDEDIKIVHDIIFNELCKGEIKQESKEKYL 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + +VLACT
Sbjct: 179 -NIIKKLQAMGAKGVVLACT 197
>gi|171318536|ref|ZP_02907687.1| aspartate racemase [Burkholderia ambifaria MEX-5]
gi|171096278|gb|EDT41185.1| aspartate racemase [Burkholderia ambifaria MEX-5]
Length = 230
Score = 41.9 bits (98), Expect = 0.100, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT ++ FL A +++L
Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHGAIEAAVALPFLHIADPTGAALRAAGVEHVALLG 124
Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + L + + ++ R+ + + + E
Sbjct: 125 TRYTMELPFYAQRLGDKFGLDVLVPDEAARSDVHRIIYDELCHGVIDAASRATYVAIIDE 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAKRGAQAVILGCT 198
>gi|86154055|ref|ZP_01072256.1| aspartate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85842469|gb|EAQ59683.1| aspartate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 231
Score = 41.9 bits (98), Expect = 0.100, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +IA NT + DE++ ++ L + +A
Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L T T+ + + LI +S I+ + C KIK+D +K +
Sbjct: 119 KIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDIIFNELCKGKIKQDSKEKYL 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + K ++LACT
Sbjct: 179 -NIINKLQEKGAKGVLLACT 197
>gi|302386999|ref|YP_003822821.1| aspartate racemase [Clostridium saccharolyticum WM1]
gi|302197627|gb|ADL05198.1| aspartate racemase [Clostridium saccharolyticum WM1]
Length = 230
Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 17/154 (11%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+WE A+ + + L+K VI NT + ++ S+ + A
Sbjct: 55 GDWEKSAVI---LSTAAKNLEKAGADFIVICTNTMHKVA-SRIQENI-SIPIIHIAEATA 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHS-----YVSQCHIHLVSSMILASRVEEYA 166
+++L T T+ + + LI++ + I ++ +I
Sbjct: 110 DELKRHNITKVALLGTKYTMTQDFYKEKLINAGITVLIPDEQEIETINDVIYHELC--LG 167
Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
++ ++ + G E+ + ++L CT
Sbjct: 168 IISEVSKETYLSIVRG-LAERGAQG---VILGCT 197
>gi|228985314|ref|ZP_04145475.1| hypothetical protein bthur0001_20120 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774410|gb|EEM22815.1| hypothetical protein bthur0001_20120 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 235
Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +I NT + ++++ + L A + + +L T T
Sbjct: 74 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 131
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + L + + V E I + E K + ++K
Sbjct: 132 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 191
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 192 AQGI---ILGCT 200
>gi|57237092|ref|YP_178104.1| aspartate racemase, putative [Campylobacter jejuni RM1221]
gi|57165896|gb|AAW34675.1| aspartate racemase, putative [Campylobacter jejuni RM1221]
gi|315057525|gb|ADT71854.1| Aspartate racemase [Campylobacter jejuni subsp. jejuni S3]
Length = 231
Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 4/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +IA NT + DE++ ++ L + +A
Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEI 180
I +L T T+ + + ++ I + + + C +IK++ +K +
Sbjct: 119 KIGLLGTKYTMTQDFYKKMLIEENISVIIPSDEDIKIVNDIIFNELCKGEIKQESKEKYL 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + K ++LACT
Sbjct: 179 -NIIKKLQEKGAKGVLLACT 197
>gi|259501350|ref|ZP_05744252.1| aspartate racemase [Lactobacillus iners DSM 13335]
gi|302190929|ref|ZP_07267183.1| aspartate racemase [Lactobacillus iners AB-1]
gi|309803524|ref|ZP_07697617.1| aspartate racemase [Lactobacillus iners LactinV 11V1-d]
gi|309805448|ref|ZP_07699495.1| aspartate racemase [Lactobacillus iners LactinV 09V1-c]
gi|309810121|ref|ZP_07703967.1| aspartate racemase [Lactobacillus iners SPIN 2503V10-D]
gi|312870917|ref|ZP_07731022.1| aspartate racemase [Lactobacillus iners LEAF 3008A-a]
gi|312872203|ref|ZP_07732276.1| aspartate racemase [Lactobacillus iners LEAF 2062A-h1]
gi|312873581|ref|ZP_07733628.1| aspartate racemase [Lactobacillus iners LEAF 2052A-d]
gi|312875728|ref|ZP_07735723.1| aspartate racemase [Lactobacillus iners LEAF 2053A-b]
gi|315653101|ref|ZP_07906026.1| aspartate racemase [Lactobacillus iners ATCC 55195]
gi|325911635|ref|ZP_08174043.1| aspartate racemase [Lactobacillus iners UPII 143-D]
gi|325912932|ref|ZP_08175306.1| aspartate racemase [Lactobacillus iners UPII 60-B]
gi|329921002|ref|ZP_08277530.1| aspartate racemase [Lactobacillus iners SPIN 1401G]
gi|259167203|gb|EEW51698.1| aspartate racemase [Lactobacillus iners DSM 13335]
gi|308164408|gb|EFO66662.1| aspartate racemase [Lactobacillus iners LactinV 11V1-d]
gi|308165266|gb|EFO67502.1| aspartate racemase [Lactobacillus iners LactinV 09V1-c]
gi|308169620|gb|EFO71667.1| aspartate racemase [Lactobacillus iners SPIN 2503V10-D]
gi|311088720|gb|EFQ47169.1| aspartate racemase [Lactobacillus iners LEAF 2053A-b]
gi|311090834|gb|EFQ49231.1| aspartate racemase [Lactobacillus iners LEAF 2052A-d]
gi|311092287|gb|EFQ50658.1| aspartate racemase [Lactobacillus iners LEAF 2062A-h1]
gi|311093607|gb|EFQ51946.1| aspartate racemase [Lactobacillus iners LEAF 3008A-a]
gi|315489466|gb|EFU79103.1| aspartate racemase [Lactobacillus iners ATCC 55195]
gi|325476621|gb|EGC79779.1| aspartate racemase [Lactobacillus iners UPII 143-D]
gi|325477746|gb|EGC80884.1| aspartate racemase [Lactobacillus iners UPII 60-B]
gi|328935278|gb|EGG31758.1| aspartate racemase [Lactobacillus iners SPIN 1401G]
Length = 248
Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 7/131 (5%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQS-GLISILSTPA 130
+ +P V+ CNTA +EL ++ + FL AI + I +++T
Sbjct: 73 AQLKPDFFVMPCNTA-HYYYNEL-ASLTDVPFLHMMRIAIHNFIDNYPNEKKIGLIATEG 130
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
++ ++ + Q L + + I + ++ +I +K G
Sbjct: 131 SIYDHLYADELSKVGRQVEFGGPEIQPLVNELIYKNIKEKGIVDAQLFYKILQLMHDKYG 190
Query: 190 KRTDVIVLACT 200
I+L CT
Sbjct: 191 CHV--ILLGCT 199
>gi|227889302|ref|ZP_04007107.1| aspartate racemase [Lactobacillus johnsonii ATCC 33200]
gi|227850104|gb|EEJ60190.1| aspartate racemase [Lactobacillus johnsonii ATCC 33200]
Length = 249
Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPAT 131
K P V+ CNTA D+L + + FL + K + + I +++T +
Sbjct: 74 KLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHMMRIAVHKFVDDFPKEEKIGLIATEGS 131
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-----CGIKIKEDEIKKEIEGCFIE 186
+ + + + + + V E + D K ++ E
Sbjct: 132 IYDHLYVDELERVGKKAE---LGGPEIQPMVNELIYHDIKEKGIVDHDLYHKILKTMHDE 188
Query: 187 KEGKRTDVIVLACT 200
+VI+L CT
Sbjct: 189 Y---GCNVILLGCT 199
>gi|88799349|ref|ZP_01114927.1| putative resistance proteins [Reinekea sp. MED297]
gi|88777888|gb|EAR09085.1| putative resistance proteins [Reinekea sp. MED297]
Length = 233
Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 41/155 (26%), Gaps = 13/155 (8%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L VIA NT + + + + L +++L T T
Sbjct: 71 LKAAGAEGLVIATNTMHKVADQITQES--QLPLLHIADCTADVIVQQGRQRVALLGTAFT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + L Y I R+ + + + + + +
Sbjct: 129 MEQDFYRARLTEKYGLDVLIPEPDERADVHRIIYNELCLGKQNADSQARYVEIAQRLQSR 188
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVD---WLDN 222
+ ++L CT L V +D
Sbjct: 189 GAEAVILGCT-------EITLLLTEEVTEVPLIDT 216
>gi|242238528|ref|YP_002986709.1| aspartate racemase [Dickeya dadantii Ech703]
gi|242130585|gb|ACS84887.1| aspartate racemase [Dickeya dadantii Ech703]
Length = 237
Score = 41.9 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 5/138 (3%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L VI NT + + + + + + A + I++L T
Sbjct: 70 FGLKLAGAEALVICTNTMHKVAETVEQRS--GLPLIHIADATAHSIKQQNLSSIALLGTR 127
Query: 130 ATLRRTYTS-NLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T+ + + L + Q + + + + C + + ++ + E
Sbjct: 128 YTMEQDFYRCRLEEKFALQVLTPDSHARNEINRIIFDELCLGRFLDSS-RQTLCQIVAEL 186
Query: 188 EGKRTDVIVLACTHYPLI 205
+ + + I+L CT PL+
Sbjct: 187 QLQGAEGIILGCTELPLL 204
>gi|229155808|ref|ZP_04283911.1| hypothetical protein bcere0010_20000 [Bacillus cereus ATCC 4342]
gi|228627652|gb|EEK84376.1| hypothetical protein bcere0010_20000 [Bacillus cereus ATCC 4342]
Length = 237
Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +I NT + ++++ + L A + + +L T T
Sbjct: 76 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 133
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + L + + V E I + E K + ++K
Sbjct: 134 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 193
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 194 AQGI---ILGCT 202
>gi|169640262|gb|ACA61184.1| aspartate racemase [Campylobacter coli]
gi|169640269|gb|ACA61190.1| putative aspartate racemase [Campylobacter coli]
Length = 231
Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +IA NT + DE++ ++ L + +A
Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L T T+ + + LI +S I+ + C KIK+D +K +
Sbjct: 119 KIGLLGTKYTMTQDFYKKILIEENISVITPSDEDIKIVNDIIFNELCKGKIKQDSKEKYL 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + K ++LACT
Sbjct: 179 -NIINKLQEKGAKGVLLACT 197
>gi|15966355|ref|NP_386708.1| putative hydantoin racemase protein [Sinorhizobium meliloti 1021]
gi|307317487|ref|ZP_07596927.1| Asp/Glu/hydantoin racemase [Sinorhizobium meliloti AK83]
gi|15075626|emb|CAC47181.1| Putative hydantoin racemase [Sinorhizobium meliloti 1021]
gi|37574380|gb|AAQ93382.1| hydantoin racemase [Sinorhizobium meliloti]
gi|306897076|gb|EFN27822.1| Asp/Glu/hydantoin racemase [Sinorhizobium meliloti AK83]
Length = 241
Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 58/168 (34%), Gaps = 24/168 (14%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131
+ VIAC R +G A Q A T S S+++T P +
Sbjct: 65 EAQGVDAYVIAC--FDDPGLHAAREVAKG-PVIGICQAAVQVA-MTISRRFSVITTLPRS 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +L+ Y ++ H V ++ L + E + KEIE I K
Sbjct: 121 V--PIIEDLVSDYGAERHCRKVRAIDLPVLA--LEEDPQRAERLLLKEIE---IAKAEDG 173
Query: 192 TDVIVLAC-----THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ IVL C + ++ + V +D + + A LL
Sbjct: 174 AEAIVLGCAGMSS-----LCDRLQKATG--VPVIDGVTAAVKMAEALL 214
>gi|329668010|gb|AEB93958.1| aspartate racemase [Lactobacillus johnsonii DPC 6026]
Length = 249
Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPAT 131
K P V+ CNTA D+L + + FL + K + + I +++T +
Sbjct: 74 KLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHMMRIAVHKFVDDFPKEEKIGLIATEGS 131
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-----CGIKIKEDEIKKEIEGCFIE 186
+ + + + + + V E + D K ++ E
Sbjct: 132 IYDHLYVDELERVGKKAE---LGGPEIQPMVNELIYRDIKEKGIVDHDLYHKILKTMHDE 188
Query: 187 KEGKRTDVIVLACT 200
+VI+L CT
Sbjct: 189 Y---GCNVILLGCT 199
>gi|42781317|ref|NP_978564.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
gi|42737239|gb|AAS41172.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
Length = 232
Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +I NT + ++++ + L A + + +L T T
Sbjct: 71 LQMGGADFIIICTNTM-HKVIEKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHL---VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + L + E I + E K + ++K
Sbjct: 129 MEQDFYKSRIKENDIKAIVPLEKNREKIXEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 188
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 189 AQGI---ILGCT 197
>gi|85707627|ref|ZP_01038693.1| aspartate racemase [Erythrobacter sp. NAP1]
gi|85689161|gb|EAQ29164.1| aspartate racemase [Erythrobacter sp. NAP1]
Length = 221
Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 45/133 (33%), Gaps = 9/133 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ +IA NT L D + L + AA +++L T T
Sbjct: 62 LEAGGADCLLIATNTMHKLADDV--EEASDLPLLHIADSAADAACAEGLTKMALLGTAFT 119
Query: 132 LRRTYTSNLIHSYVS-QCHIHLVSSMILASRV--EEYACGIKIK-EDEIKKEIEGCFIEK 187
+ + + + + I R+ EE G + E +EI +++
Sbjct: 120 MEQDFYRERLEEHHGLDVIIPEAGDRAEVHRIIYEELIAGEVLDASRETYREIIARLVDQ 179
Query: 188 EGKRTDVIVLACT 200
+ ++L CT
Sbjct: 180 GAQG---VILGCT 189
>gi|58338065|ref|YP_194650.1| aspartate racemase [Lactobacillus acidophilus NCFM]
gi|227902757|ref|ZP_04020562.1| aspartate racemase [Lactobacillus acidophilus ATCC 4796]
gi|58255382|gb|AAV43619.1| aspartate racemase [Lactobacillus acidophilus NCFM]
gi|227869420|gb|EEJ76841.1| aspartate racemase [Lactobacillus acidophilus ATCC 4796]
Length = 249
Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 15/135 (11%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-----LISILS 127
DK V+ CNTA D+L + FL ++ A I +++
Sbjct: 73 DKLGTDFLVMPCNTA-HYFYDDL-AALTDKPFLHM---MRIAVHNFLDNYPDEEKIGLIA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186
T ++ ++ I + + + V E ++ + ++
Sbjct: 128 TEGSIYDHLYADEIKKVGRKVE---LGGPEIQPMVNELIYSDIKEKGTVDHDLYHKILQT 184
Query: 187 KEGK-RTDVIVLACT 200
K +VI+L CT
Sbjct: 185 MHDKYGCNVILLGCT 199
>gi|239932811|ref|ZP_04689764.1| glutamate racemase [Streptomyces ghanaensis ATCC 14672]
Length = 85
Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 199 CTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
CTHY L+ R V ++ ++A +A + + LSG
Sbjct: 1 CTHYELVAERIRAAVQRPAGPQVALYGSAGAVAAQALRRIGERPAPGAPAGGTLTVLLSG 60
Query: 255 K 255
+
Sbjct: 61 R 61
>gi|238853707|ref|ZP_04644074.1| aspartate racemase [Lactobacillus gasseri 202-4]
gi|238833643|gb|EEQ25913.1| aspartate racemase [Lactobacillus gasseri 202-4]
Length = 249
Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 9/132 (6%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPA 130
K P V+ CNTA D+L + + FL + K + + I +++T
Sbjct: 73 AKLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHMMRIAVHKFVDDFPKEEKIGLIATEG 130
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIEKEG 189
++ + + + + + V E ++ + ++
Sbjct: 131 SIYDHLYLDELERVGKKVE---LGGPEIQPMVNELIYSDIKEKGIVDHDLYHKILKTMHD 187
Query: 190 K-RTDVIVLACT 200
K +VI+L CT
Sbjct: 188 KYGCNVILLGCT 199
>gi|115352231|ref|YP_774070.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115282219|gb|ABI87736.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 230
Score = 41.9 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 38/142 (26%), Gaps = 19/142 (13%)
Query: 68 FSDILDKYQPVLSVIACNTA--------FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
+ L+ L V+ NT + FL A
Sbjct: 67 AARQLEAAGADLVVLTTNTMHRVYGAIEAAVAL----------PFLHIADPTGAALRAAG 116
Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+++L T T+ + + L + + ++ R+ + + +
Sbjct: 117 VERVALLGTRYTMELPFYAERLRDKFGLDVLVPDEAARGDVHRIIYDELCHGVIDAASRA 176
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
E + ++L CT
Sbjct: 177 TYVAIIDELAKRGAQAVILGCT 198
>gi|326793009|ref|YP_004310830.1| aspartate racemase [Clostridium lentocellum DSM 5427]
gi|326543773|gb|ADZ85632.1| aspartate racemase [Clostridium lentocellum DSM 5427]
Length = 229
Score = 41.5 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 47/129 (36%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ +I NT + D++++ ++ L +++L T T
Sbjct: 71 LERSGADFIIICTNTMHKVA-DQIQAKV-NIPILHIAEVTAGRLKENTIEKVALLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+++ + + + + I + + + + + + KKE E K
Sbjct: 129 MQQDFYKSKLIEQGIEVLIPNEADIEVVNNTIYNELCLGSVLETSKKEFIRIIEELADKG 188
Query: 192 TDVIVLACT 200
+ ++L CT
Sbjct: 189 AEGVILGCT 197
>gi|312142817|ref|YP_003994263.1| aspartate racemase [Halanaerobium sp. 'sapolanicus']
gi|311903468|gb|ADQ13909.1| aspartate racemase [Halanaerobium sp. 'sapolanicus']
Length = 231
Score = 41.5 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 53/160 (33%), Gaps = 22/160 (13%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
L ++++ + + +L + C NT + + ++ L + ++
Sbjct: 58 ELLTEKMIEIALKLEKAGGDILLI--CTNTMHKMAAEV--EAAINIPLLHIADSAGESIK 113
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+++L T T+ + + Q + L EE + E+
Sbjct: 114 EMGLNKVALLGTKFTMEEDFYKKRLKD-NYQLEV-------LIPEAEEREIIHNVIYQEL 165
Query: 177 ---------KKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ + + + + + +VL CT PL++
Sbjct: 166 ISGIIKEQSRTKFKKIIEALKTRGAEGVVLGCTEIPLLIK 205
>gi|293608375|ref|ZP_06690678.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828948|gb|EFF87310.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 244
Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 78/222 (35%), Gaps = 49/222 (22%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACN---TAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
+++ + L VIAC T + S +G A +
Sbjct: 59 EEIRQ------GEFL---GVNAYVIACFGDPTLYAA------REMTSAPVIGIAEAAMRT 103
Query: 115 AAYTQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIK 172
A+Y +G S+++T T+ ++ +L H Y + V + I VEE
Sbjct: 104 ASYVSNG-FSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELELPDSDA 157
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSI 226
I+ E + E + D IVL C + + V +D +
Sbjct: 158 YRTIRDECKKALTEDKS---DAIVLGC------AGMSDLCLKLQNELG--VIVIDGVAAA 206
Query: 227 ARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
++A +L ++N ++V D + P + ++ GFG
Sbjct: 207 VKQAE-MLVQLNLKTSKVGD-----WASPPVKSYTGILSGFG 242
>gi|304440039|ref|ZP_07399932.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371531|gb|EFM25144.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 633
Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 3/110 (2%)
Query: 92 KDELRSTFPSM--AFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCH 149
KD + + + +G + +K T++G I++ +T A+L L +
Sbjct: 88 KDVMNEGYDVIKDIDIGDIVGVKGKVFKTEAGEITVRATEASLLSKSLQILPEKFHGLKD 147
Query: 150 IHLVSSMILASRVEEYAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
I L M + + IK +I K I+ E+ + +L
Sbjct: 148 IELRYRMRYVDLIVNPEVKDVFIKRSKIIKAIKEYLDERGFLEVETPILG 197
>gi|169796265|ref|YP_001714058.1| hydantoin-racemase [Acinetobacter baumannii AYE]
gi|213157000|ref|YP_002319045.1| Asp/Glu racemase [Acinetobacter baumannii AB0057]
gi|215483720|ref|YP_002325943.1| Hydantoin racemase [Acinetobacter baumannii AB307-0294]
gi|301345499|ref|ZP_07226240.1| Hydantoin racemase [Acinetobacter baumannii AB056]
gi|301594989|ref|ZP_07239997.1| Hydantoin racemase [Acinetobacter baumannii AB059]
gi|332855396|ref|ZP_08435852.1| hydantoin racemase [Acinetobacter baumannii 6013150]
gi|332867258|ref|ZP_08437508.1| hydantoin racemase [Acinetobacter baumannii 6013113]
gi|169149192|emb|CAM87072.1| hydantoin-racemase [Acinetobacter baumannii AYE]
gi|213056160|gb|ACJ41062.1| Asp/Glu racemase [Acinetobacter baumannii AB0057]
gi|213987924|gb|ACJ58223.1| Hydantoin racemase [Acinetobacter baumannii AB307-0294]
gi|332727486|gb|EGJ58913.1| hydantoin racemase [Acinetobacter baumannii 6013150]
gi|332734091|gb|EGJ65224.1| hydantoin racemase [Acinetobacter baumannii 6013113]
Length = 244
Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 77/220 (35%), Gaps = 41/220 (18%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+++ ++LD VIAC R S +G A + A+Y
Sbjct: 59 EEIRQ------GELLD---ADAYVIAC--FGDPALYAARE-ISSAPVIGIAEAAMRTASY 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEI 176
+G + + T+ ++ +L H Y + V + I VEE I
Sbjct: 107 VSTGFSVVTTLQRTVNMSW--HLAHRYGATPFCKNVRACDI---AVEELEVPDSDAYRTI 161
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV------FRQLSPWPVDWLDNSDSIARRA 230
+ E + E + D IVL C + + V +D + ++A
Sbjct: 162 RDECKKALAEDKS---DAIVLGC------AGMSDLCLKLQNEL--EVIVIDGVAAAVKQA 210
Query: 231 RCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+L ++N ++V D + P ++ GFG++
Sbjct: 211 E-MLVQLNLKTSKVGD-----WASPPVKNYTGILSGFGVR 244
>gi|307307825|ref|ZP_07587554.1| Asp/Glu/hydantoin racemase [Sinorhizobium meliloti BL225C]
gi|306901691|gb|EFN32293.1| Asp/Glu/hydantoin racemase [Sinorhizobium meliloti BL225C]
Length = 241
Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 57/168 (33%), Gaps = 24/168 (14%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131
+ VIAC R +G A Q A T S S+++T P +
Sbjct: 65 EAQGVDAYVIAC--FDDPGLHAAREVAKG-PVIGICQAAVQVA-MTISRRFSVITTLPRS 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +L+ Y ++ H V ++ L + E + KEIE I
Sbjct: 121 V--PIIEDLVSDYGAERHCRKVRAIDLPVLA--LEEDPQRAERLLLKEIE---IAMAEDG 173
Query: 192 TDVIVLAC-----THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ IVL C + ++ + V +D + + A LL
Sbjct: 174 AEAIVLGCAGMSS-----LCDRLQKATG--VPVIDGVTAAVKMAEALL 214
>gi|282163103|ref|YP_003355488.1| aspartate racemase [Methanocella paludicola SANAE]
gi|282155417|dbj|BAI60505.1| aspartate racemase [Methanocella paludicola SANAE]
Length = 233
Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 3/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+M + L +I NT ++ D+++ + L A +
Sbjct: 63 IMADMARGLKWAGADFILICTNTM-HIMADDVQRRA-GIDVLHIADATGLEIRRAGLKKV 120
Query: 124 SILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T+ + YT L + + I + + + E K ++
Sbjct: 121 GLLGTRFTMEKDFYTGRLKDGFGIEAIIPEEAERQEVHDIIFKELCAGVIRPESKARLKE 180
Query: 183 CFIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 181 IIAGLSSRGAEGIILGCT 198
>gi|260495458|ref|ZP_05815584.1| aspartate racemase [Fusobacterium sp. 3_1_33]
gi|260196995|gb|EEW94516.1| aspartate racemase [Fusobacterium sp. 3_1_33]
Length = 231
Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 41/129 (31%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K VI NT ++ + + L I +L T T
Sbjct: 71 LEKAGADFIVICTNTMHKVVSGI--KKYTKLPILHIAEMTAIELKKAGIKKIGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+++ + ++ + I + + + V + + E K+E E
Sbjct: 129 MQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIFNELCLGEIKKESKEEYLRIIKELSKAG 188
Query: 192 TDVIVLACT 200
++L CT
Sbjct: 189 AKGVILGCT 197
>gi|288573175|ref|ZP_06391532.1| aspartate racemase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568916|gb|EFC90473.1| aspartate racemase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 234
Score = 41.5 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 29/92 (31%), Gaps = 7/92 (7%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + L+ L L L + CNTA D R ++
Sbjct: 63 GRSPEADLRDGLETLIDW-----GADLLAVPCNTA-HFFIDGFREELSVPFIHIVESTLE 116
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144
A A + SG +LST TL+ H
Sbjct: 117 LAVANSPSGA-WLLSTEGTLKSGLYQKEAHKI 147
>gi|209550089|ref|YP_002282006.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535845|gb|ACI55780.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 239
Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 57/181 (31%), Gaps = 18/181 (9%)
Query: 24 GGLIVLQKMRFLMPEYHFIYV---ADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
GGL + + + + + D G +RL + + + +
Sbjct: 31 GGLASAELILHSVNFEEIVALQKAGDWAGA----------ARRLGEVAARLEAAGAGCIL 80
Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
+ C NT LI DE+ + S + + ++ +L+T T+ + ++
Sbjct: 81 I--CTNTM-HLIADEVAAKI-SAPLIHIIDETAKSLHAAGRKRPLLLATRYTMEHGFYTD 136
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ S + + + D ++++ D I+L C
Sbjct: 137 RMKSLGLDIMVPDAADRTSVHDIIFNELCAGRVHDSSREKLIDIIDRAAEHGADSIILGC 196
Query: 200 T 200
T
Sbjct: 197 T 197
>gi|17544931|ref|NP_518333.1| aspartate racemase [Ralstonia solanacearum GMI1000]
gi|17427221|emb|CAD13740.1| putative aspartate racemase protein [Ralstonia solanacearum
GMI1000]
Length = 229
Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 8/154 (5%)
Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
+ L + ++ L ++ + NT ++ D +R P + + A+ A
Sbjct: 55 KQFDQLAEYVLGALRS-LAAGGADIAALTGNTPN-IVMDRVRPMSP-IPVVSAIEATCAE 111
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR---VEEYACGIKI 171
A + +L T T+ T+ + + + +A +E +
Sbjct: 112 AQRRGVRRVGLLGTVFTMTNTFFK--VPFEDRSIQVVVPDDAQIAQIQHKIESELEHGIV 169
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
++ I + + D + LACT PLI
Sbjct: 170 TDETRDAFIAIIKDLQTREGIDQVALACTELPLI 203
>gi|121612261|ref|YP_999809.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
81-176]
gi|167004784|ref|ZP_02270542.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
81-176]
gi|87249036|gb|EAQ71998.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
81-176]
Length = 231
Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +IA NT + +E++ ++ L + +A
Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFNEIQQNI-NIPILHIAKSSAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L T T+ + + LI +S I+ + C KIK+D +K +
Sbjct: 119 KIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDIIFNELCKGKIKQDSKEKYL 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + K ++LACT
Sbjct: 179 -NIIKKLQEKGAKGVLLACT 197
>gi|268320123|ref|YP_003293779.1| hypothetical protein FI9785_1659 [Lactobacillus johnsonii FI9785]
gi|262398498|emb|CAX67512.1| racD [Lactobacillus johnsonii FI9785]
Length = 249
Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPAT 131
K P V+ CNTA D+L + + FL + K + + I +++T +
Sbjct: 74 KLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHMMRIAVHKFVDDFPKEEKIGLIATEGS 131
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-----CGIKIKEDEIKKEIEGCFIE 186
+ + + + + + V E + D K ++ E
Sbjct: 132 IYDHLYVDELERVGKKAE---LGGPKIQPMVNELIYRDIKEKGIVDHDLYHKILKTMHDE 188
Query: 187 KEGKRTDVIVLACT 200
+VI+L CT
Sbjct: 189 Y---GCNVILLGCT 199
>gi|160946444|ref|ZP_02093653.1| hypothetical protein PEPMIC_00404 [Parvimonas micra ATCC 33270]
gi|158447560|gb|EDP24555.1| hypothetical protein PEPMIC_00404 [Parvimonas micra ATCC 33270]
Length = 231
Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 6/101 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
N + L + L +IL++ + I CNT DE ++ F ++ + +
Sbjct: 55 NKDTEFLNEIKKDL--EILERIGIDVVAIPCNT-SHYFYDEFKN-FTNLKIINMIEETIL 110
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
+++ T TL + + + +S
Sbjct: 111 EIKRRGIKKVAVFGTLGTLNSKVYNKYAKE--NGIEVKELS 149
>gi|157371646|ref|YP_001479635.1| aspartate racemase [Serratia proteamaculans 568]
gi|157323410|gb|ABV42507.1| aspartate racemase [Serratia proteamaculans 568]
Length = 230
Score = 41.5 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 38/125 (30%), Gaps = 7/125 (5%)
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
VI NT + + + + A + +L T T+ + +
Sbjct: 78 AIVICTNTMHKVA--DAVEQASGLPLIHIADATALQVRQQDIRRVGLLGTRFTMEQEFYR 135
Query: 139 NLIHSYVSQCHIHLVSS-MILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + V++ + R+ EE G D + E + E + I
Sbjct: 136 GRLQKKYGIEVVTPVAADRDIVHRIIYEELCLGKI--RDASRDEYRRIIGDLEQQGAQGI 193
Query: 196 VLACT 200
+ CT
Sbjct: 194 IFGCT 198
>gi|13473462|ref|NP_105029.1| aspartate racemase [Mesorhizobium loti MAFF303099]
gi|14024211|dbj|BAB50815.1| aspartate racemase [Mesorhizobium loti MAFF303099]
Length = 231
Score = 41.5 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 4/139 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
L+ + L+ V+ NT + T S+ + A A
Sbjct: 63 LLIEAARKLEAGGAEGLVLCTNTM--HRLADQVQTSVSIPLIHIADATAMAVKRAGMQRP 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKEIE 181
++L+T T+ + + L Y + + + + RV + C + E +E
Sbjct: 121 ALLATRFTMEQDFYKGRLADKYGLRPVVPDAAGRDMVHRVIYDELCQGIVSEASKAAYME 180
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ + D I++ CT
Sbjct: 181 EAERLRREEAADSIIMGCT 199
>gi|298368550|ref|ZP_06979868.1| aspartate racemase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282553|gb|EFI24040.1| aspartate racemase [Neisseria sp. oral taxon 014 str. F0314]
Length = 230
Score = 41.5 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 18/145 (12%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+ ++A NT + ++ + L V A A +
Sbjct: 63 VLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAA--GIPLLHVVDATAAAIKRQGLSAV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE----IKKE 179
+L T T+ + + + S + ++ + E+ I ++ I+ E
Sbjct: 121 GLLGTRFTMSDGFYTERMGSQG----VQTIA----PTAAEQDEIHRIIFDELCLNRIRPE 172
Query: 180 IEGCFIE----KEGKRTDVIVLACT 200
F + + + ++L CT
Sbjct: 173 SARYFYDVIGRLKNEGAQGVILGCT 197
>gi|306479819|emb|CBV36062.1| glutamate racemase [Helicobacter pylori]
Length = 75
Score = 41.5 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 20/75 (26%), Gaps = 8/75 (10%)
Query: 199 CTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
CTH+PLI H + + D+I + F
Sbjct: 1 CTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPKVEFHA 58
Query: 253 SGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 SGDVVWLEKQAKEWL 73
>gi|311281614|ref|YP_003943845.1| aspartate racemase [Enterobacter cloacae SCF1]
gi|308750809|gb|ADO50561.1| aspartate racemase [Enterobacter cloacae SCF1]
Length = 244
Score = 41.5 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 17/173 (9%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + +L+ VI CNTA ++L++ + + + A A S
Sbjct: 62 HSLEQYLHMLEAAGAECIVIPCNTA-HYWFEDLQA-VAKVEMISILDATLNAIPDGVS-C 118
Query: 123 ISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L+T ATL R Y ++ + + G K + + +
Sbjct: 119 VGLLATDATLAARLYQDKAAARGMTLIQPEREEQAQVMQAIYALKRGDKTAAEAL---LL 175
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230
+ + I++ CT PLI ++ ++D++ S+ R A
Sbjct: 176 PQIRQLAARGAQAIIMGCTEIPLI------VAGHEDAFSCRFVDSTASLVRAA 222
>gi|222095821|ref|YP_002529878.1| aspartate racemase [Bacillus cereus Q1]
gi|221239879|gb|ACM12589.1| aspartate racemase [Bacillus cereus Q1]
Length = 232
Score = 41.1 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +I NT ++ ++++ + L A + + +L T T
Sbjct: 71 LQMGGADFIIICTNTMHKVV-EKIKENI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + L + + V E I + E K + ++K
Sbjct: 129 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 188
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 189 AQGI---ILGCT 197
>gi|229827427|ref|ZP_04453496.1| hypothetical protein GCWU000182_02816 [Abiotrophia defectiva ATCC
49176]
gi|229788365|gb|EEP24479.1| hypothetical protein GCWU000182_02816 [Abiotrophia defectiva ATCC
49176]
Length = 230
Score = 41.1 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 26/96 (27%), Gaps = 4/96 (4%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
N + L+ IL+ I CNT DE R + + +
Sbjct: 55 NRKTEFLEAIKKDFA--ILENIGVEAVAIPCNT-SHYFYDEFR-KLTDLKIINMIEETIL 110
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCH 149
+ ISI T TL Y +
Sbjct: 111 EVKKSGVKKISIFGTLGTLNSKVYERYAKEYGLEVK 146
>gi|152994507|ref|YP_001339342.1| Asp/Glu racemase [Marinomonas sp. MWYL1]
gi|150835431|gb|ABR69407.1| Asp/Glu racemase [Marinomonas sp. MWYL1]
Length = 243
Score = 41.1 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 44/153 (28%), Gaps = 17/153 (11%)
Query: 53 GNWE-----DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA 107
G D + + + + +IAC D R +G
Sbjct: 40 GPKSIECAFDEVIASAALLDLIEQGKQQGVDAHIIAC--FGDPALDAARE-LADAPVIGI 96
Query: 108 VPAIKQAAAYTQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166
A Q A+ +++T TL + +L+ Y Q V + +
Sbjct: 97 AEAGFQMASLIAH-RFGVVTTLSRTL--PASEHLLQKYGHQHKCSGVRATDIPVLA---L 150
Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
I ++ K C E + IVL C
Sbjct: 151 ENIDPAAYQLLKT--ECLAAIEEDGAEAIVLGC 181
>gi|254975847|ref|ZP_05272319.1| putative amino acid recemase [Clostridium difficile QCD-66c26]
gi|255093234|ref|ZP_05322712.1| putative amino acid recemase [Clostridium difficile CIP 107932]
gi|255314976|ref|ZP_05356559.1| putative amino acid recemase [Clostridium difficile QCD-76w55]
gi|255517651|ref|ZP_05385327.1| putative amino acid recemase [Clostridium difficile QCD-97b34]
gi|255650761|ref|ZP_05397663.1| putative amino acid recemase [Clostridium difficile QCD-37x79]
gi|260683847|ref|YP_003215132.1| putative amino acid recemase [Clostridium difficile CD196]
gi|260687507|ref|YP_003218641.1| putative amino acid recemase [Clostridium difficile R20291]
gi|306520672|ref|ZP_07407019.1| aspartate racemase [Clostridium difficile QCD-32g58]
gi|260210010|emb|CBA64048.1| putative amino acid recemase [Clostridium difficile CD196]
gi|260213524|emb|CBE05253.1| putative amino acid recemase [Clostridium difficile R20291]
Length = 228
Score = 41.1 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VI NT + D+++ + + L + +++L T T
Sbjct: 71 LQEAGADFIVICTNTM-HKVSDKIQESI-HIPLLHIADVTATVLREKEIKKVALLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + N+I + + I I+ + + I + KK + +
Sbjct: 129 MEQDFYKNVIINNGIEVLIPNEEDRIIVNDTIFNELCLGIISESSKKAFLSIIDKLGKQG 188
Query: 192 TDVIVLACT 200
+ ++L CT
Sbjct: 189 AEGVILGCT 197
>gi|329119082|ref|ZP_08247774.1| aspartate racemase [Neisseria bacilliformis ATCC BAA-1200]
gi|327464821|gb|EGF11114.1| aspartate racemase [Neisseria bacilliformis ATCC BAA-1200]
Length = 229
Score = 41.1 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ L ++A NT + + L V A A + +L T T
Sbjct: 71 LETAGADLLLLATNTMHKVAPAI--EAAVKIPLLHIVDATAAAIKKQGLSAVGLLGTRFT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + Q + R+ + + E + + +
Sbjct: 129 MSDGFYTERMAAQGVQTIVPDDEEQDEIHRIIFEELCLNQIKPESAAYFQHVIVRLKDAG 188
Query: 192 TDVIVLACT 200
++L CT
Sbjct: 189 AQGVILGCT 197
>gi|255321352|ref|ZP_05362512.1| aspartate racemase [Campylobacter showae RM3277]
gi|255301505|gb|EET80762.1| aspartate racemase [Campylobacter showae RM3277]
Length = 227
Score = 41.1 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 24/70 (34%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L IACNTA K ++ + + + + + I++++T T
Sbjct: 70 LKNAGCEAICIACNTAHYFAKRLTDECGVNILHIAKIATASIKSNFPHAKKIAVIATTGT 129
Query: 132 LRRTYTSNLI 141
N +
Sbjct: 130 TAAKIYENEL 139
>gi|242398551|ref|YP_002993975.1| hydantoin racemase [Thermococcus sibiricus MM 739]
gi|242264944|gb|ACS89626.1| hydantoin racemase [Thermococcus sibiricus MM 739]
Length = 224
Score = 41.1 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 43/184 (23%)
Query: 52 YGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI 111
Y + K +++ L + + +I+C A +E R S+ +GA +
Sbjct: 49 YDEKTEEEAKPKILRLAKEF-ENEGVDAIIISC--AADPAVEEAR-KLVSVPVIGAGSSA 104
Query: 112 KQAAAYTQSGLISIL----STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167
A I +L TP ++ LI E++
Sbjct: 105 SALALAYA-RKIGVLNLTEETPRVIKEVLGDKLI--------------------AEDHPE 143
Query: 168 GIKIKEDEI----KKEIEGCFIEKEGKRTDVIVLACT-----HYPLIVHVFRQLSPWPVD 218
G+ D + +KE + K + IVL CT +I + + PV
Sbjct: 144 GVSNTLDLMTDWGRKEAINAARRLKEKGVEAIVLGCTGMSTI---MIAPILEKEVGIPV- 199
Query: 219 WLDN 222
+D
Sbjct: 200 -IDP 202
>gi|167577770|ref|ZP_02370644.1| aspartate racemase [Burkholderia thailandensis TXDOH]
Length = 226
Score = 41.1 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 38/155 (24%), Gaps = 14/155 (9%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ NT + S+ F+ V +A +L T T+
Sbjct: 68 EAGGADFVVLCTNTMHKVAPAI--EAALSVPFVHIVDPTARALRRAGVRRAGLLGTRFTM 125
Query: 133 RRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + S + + V + D + E
Sbjct: 126 EAAFYRERMASRHGIDVIVPDERDRAVIHDVIYDELCHGVVRDASRDAYRRIIESLEAAG 185
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
++L CT L D++ +
Sbjct: 186 AQGVILGCT-------EIALLIGPE----DSALPV 209
>gi|225442873|ref|XP_002281753.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 305
Score = 41.1 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 59/175 (33%), Gaps = 28/175 (16%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--------L 122
L++ V+ C+ + + S S+ FL + + +
Sbjct: 131 FLERSGVQCIVMPCH--ISHSWHDEISRGSSVPFLHMGECVARELKNAKLKPLEAGSPLR 188
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYAC-GIKIKEDEIKKE 179
I +L+T ATL + + + + ++M + +E + ++ + ++
Sbjct: 189 IGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEAFNRKDMEGARNLLRIA 248
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230
++ + + + ++LA L P +D D++AR
Sbjct: 249 LQVLLV----RAVNTVILA-------SDDMHDLLPRDDPLLKKCVDPMDALARST 292
>gi|302339718|ref|YP_003804924.1| Asp/Glu/hydantoin racemase [Spirochaeta smaragdinae DSM 11293]
gi|301636903|gb|ADK82330.1| Asp/Glu/hydantoin racemase [Spirochaeta smaragdinae DSM 11293]
Length = 272
Score = 41.1 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 24/163 (14%)
Query: 84 CNT--------AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG-LISILSTPATLRR 134
CNT AFT ++L +++ G + ILST T
Sbjct: 102 CNTFHAPLVWNAFTKQLEQL--HAAVKPVHMLDQTVEELRQRFAPGAHVGILSTIGTKES 159
Query: 135 TYTSNLIHS--YVSQCHIHLVSSMILASRVEEYACGIKIKEDE---IKKEIEGCFIEKEG 189
N I ++ + + + + +++ G+K K K ++
Sbjct: 160 GVWRNAIQEAGFIP-LETDQMWTEKVHGAIYDHSWGLKAKSPASGKAKAMLQEATEYLIN 218
Query: 190 KRTDVIVLACTHYPL-IVH-VFRQLSPWPVDWLDNSDSIARRA 230
K D I+L CT PL + FR + +D S+AR
Sbjct: 219 KGADAIILGCTEIPLALREGPFRNVM-----LVDPVSSLARAL 256
>gi|124265378|ref|YP_001019382.1| hypothetical protein Mpe_A0185 [Methylibium petroleiphilum PM1]
gi|124258153|gb|ABM93147.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 238
Score = 41.1 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 5/123 (4%)
Query: 80 SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
+IA NT + ++ + L AI A I +L T T+ + + +
Sbjct: 79 LLIASNTM-HRVAPTVQQAC-GLPLLHIGDAIGAALRAAGLTRIGLLGTRFTMEQDFLRD 136
Query: 140 -LIHSYVSQCHIHLVSSMI-LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L + + + + L + + C + D ++ +VL
Sbjct: 137 HLRQRHGVEMRVPGEADRATLQQLIFDELCRGIV-RDASRQATLTIVDRMAADGAQGVVL 195
Query: 198 ACT 200
CT
Sbjct: 196 GCT 198
>gi|56709079|ref|YP_165124.1| hydantoin racemase [Ruegeria pomeroyi DSS-3]
gi|56680764|gb|AAV97429.1| hydantoin racemase [Ruegeria pomeroyi DSS-3]
Length = 227
Score = 41.1 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 10/133 (7%)
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
L ++ VIAC D +R T S+ LG A AA+ + S++
Sbjct: 57 LLEEVARHKDVDAIVIAC--FDDTGLDAVR-TLVSVPVLGIGEAAYHAASMIANK-FSVI 112
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T + +NL+ ++Q + ++ I ++EE G +I+ EI +
Sbjct: 113 TTLSRSVPGLENNLMRYGLAQKCARVRATDIPVLKLEE---GDPATLSKIRSEISASIAQ 169
Query: 187 KEGKRTDVIVLAC 199
T+ IVL C
Sbjct: 170 ---DNTEAIVLGC 179
>gi|159186284|ref|NP_355961.2| hydantoin racemase [Agrobacterium tumefaciens str. C58]
gi|38016569|gb|AAR07618.1| hydantoin racemase 1 [Agrobacterium tumefaciens str. C58]
gi|159141418|gb|AAK88746.2| hydantoin racemase [Agrobacterium tumefaciens str. C58]
Length = 240
Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 12/128 (9%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131
+ + VIAC R +G A Q A T S SI++T P +
Sbjct: 65 EGHGVDAYVIAC--FDDPGLHAAREVARG-PVIGICQAAVQVA-MTISRRFSIITTLPRS 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +L+ Y +Q + V ++ L ++ E +++EIE K
Sbjct: 121 I--PIIEDLVEDYGAQRYCRKVRAIDLPVL--GLEEDPEVAEALLRREIEAA---KREDA 173
Query: 192 TDVIVLAC 199
+ I+L C
Sbjct: 174 AEAIILGC 181
>gi|50085353|ref|YP_046863.1| hydantoin-racemase [Acinetobacter sp. ADP1]
gi|49531329|emb|CAG69041.1| hydantoin-racemase [Acinetobacter sp. ADP1]
Length = 232
Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 38/127 (29%), Gaps = 10/127 (7%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Q +IAC R +G A A + + T +
Sbjct: 65 RENQVDGHIIAC--FGDPALHAARE-IADAPVIGIAEAAFHVATLVATK--FSIVTTLSR 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R +L+H Y + + L E E+ +K +E C K+
Sbjct: 120 TRIIAEHLLHEYGFVHKCSNIHCIDLPVL--ELESN---TEETYQKLLEHCLKAKQQDNI 174
Query: 193 DVIVLAC 199
IVL C
Sbjct: 175 GAIVLGC 181
>gi|295688081|ref|YP_003591774.1| aspartate racemase [Caulobacter segnis ATCC 21756]
gi|295429984|gb|ADG09156.1| aspartate racemase [Caulobacter segnis ATCC 21756]
Length = 236
Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 42/147 (28%), Gaps = 19/147 (12%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + L+ V+ NT + E + L +A
Sbjct: 65 RRLADAARALEAGGADFLVLCTNTM--HREAETIEAAVRIPLLHIADPTGEAIKAAGLST 122
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI------ 176
+ +L T T+ + + +L E+ A +I +E+
Sbjct: 123 VGLLGTAFTMEHDFYRGRLE--------TQHGLTVLTPEAEDRAAVHRIIYEELVAGRVL 174
Query: 177 ---KKEIEGCFIEKEGKRTDVIVLACT 200
++ + + I+L CT
Sbjct: 175 DASREVYRAVIERLVARGAEAIILGCT 201
>gi|193077759|gb|ABO12629.2| Aspartate racemase [Acinetobacter baumannii ATCC 17978]
Length = 242
Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
L ++ + V C NT + ++ F+ A +
Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179
+++L T T+ + + + + I ++ + S + + C I D K
Sbjct: 118 RKVALLGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSIIYDELCLGLINPDSQNKY 177
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
E G+ + I+L CT
Sbjct: 178 -MTIVEELIGQGAEGIILGCT 197
>gi|239625205|ref|ZP_04668236.1| aspartate racemase [Clostridiales bacterium 1_7_47_FAA]
gi|239519435|gb|EEQ59301.1| aspartate racemase [Clostridiales bacterium 1_7_47FAA]
Length = 234
Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+K VI NT + ++ S+ L + +
Sbjct: 63 ILGQAARSLEKAGADFIVICTNTMHKVAPRI--QSYISIPLLHIADVTTECLKDRGIKTV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++L T T+ + + + Q I + +RV + E +
Sbjct: 121 ALLGTRYTMEQDFYKERLVQSGLQVLIPEEPQREMINRVIFDELCLGTISPESRAGFLAI 180
Query: 184 FIEKEGKRTDVIVLACT 200
K + ++L CT
Sbjct: 181 IRGLGQKGAEGVILGCT 197
>gi|42519759|ref|NP_965689.1| aspartate racemase [Lactobacillus johnsonii NCC 533]
gi|41584049|gb|AAS09655.1| aspartate racemase [Lactobacillus johnsonii NCC 533]
Length = 249
Score = 41.1 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILSTPAT 131
K P V+ CNTA D+L + + FL + K + + I +++T +
Sbjct: 74 KLNPDFFVMPCNTA-HYFYDDL-AALTGVPFLHMMRIAVHKFVDDFPKEEKIGLIATEGS 131
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-----CGIKIKEDEIKKEIEGCFIE 186
+ + + + + + V E + D K ++ E
Sbjct: 132 IYDHLYVDELERVGKKAE---LGGPEIQPMVNELIYRDIKEKGIVDHDLYHKILKTMHDE 188
Query: 187 KEGKRTDVIVLACT 200
+VI+L CT
Sbjct: 189 Y---GCNVILLGCT 199
>gi|299529910|ref|ZP_07043338.1| aspartate racemase [Comamonas testosteroni S44]
gi|298722082|gb|EFI63011.1| aspartate racemase [Comamonas testosteroni S44]
Length = 265
Score = 41.1 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159
S+ FL + AA ++ +L T T+ + + L + + + +
Sbjct: 132 SIPFLHIADPVGAAARAAGVQVLGLLGTRFTMEQPFMRERLEQQFGLKVLVPGEAERAQV 191
Query: 160 SRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
R+ EE G D +K + + +VL CT
Sbjct: 192 HRIIYEELCAGQI--SDVSRKLYQRAIESLAARGAQAVVLGCT 232
>gi|123441625|ref|YP_001005610.1| putative aspartate/glutamate racemase [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122088586|emb|CAL11381.1| putative aspartate/glutamate racemase [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 232
Score = 41.1 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 3/130 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + V+ NT + D T + L A I +L T T
Sbjct: 72 LKRAGAEVVVVCTNTMHKVADDI--ETASGLPLLHIADATAAQIKQQGINKIGLLGTRYT 129
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + L + + + +R+ + I + ++E E +
Sbjct: 130 MEQEFYRGRLTEKHDIDVITPNSADREIINRIIYEELCLGITRETSRQEYRRIIGHLEEQ 189
Query: 191 RTDVIVLACT 200
I+ CT
Sbjct: 190 GAQGIIFGCT 199
>gi|294010916|ref|YP_003544376.1| putative aspartate/glutamate racemase [Sphingobium japonicum UT26S]
gi|292674246|dbj|BAI95764.1| putative aspartate/glutamate racemase [Sphingobium japonicum UT26S]
Length = 231
Score = 40.7 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 35/136 (25%), Gaps = 7/136 (5%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L +I NT + D + L + + +L
Sbjct: 67 AARRLEAGGADLLLICTNTMHRMATDV--QAAVDVPLLHIADPTAERIKAAGFSKVGLLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCF 184
T T+ + L + I R+ EE G + +
Sbjct: 125 TAFTMEHAFYKGRLADQHGLSVIIPNDEDRATVHRIIYEELVAGKVLPTS--RDAYRAII 182
Query: 185 IEKEGKRTDVIVLACT 200
++L CT
Sbjct: 183 ARLVEDGAQAVILGCT 198
>gi|225389968|ref|ZP_03759692.1| hypothetical protein CLOSTASPAR_03718 [Clostridium asparagiforme
DSM 15981]
gi|225043983|gb|EEG54229.1| hypothetical protein CLOSTASPAR_03718 [Clostridium asparagiforme
DSM 15981]
Length = 126
Score = 40.7 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 36/92 (39%)
Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168
A QA + + +L T T+++ + + + I M + +R+
Sbjct: 2 EATAQALIDSGITRVLLLGTRYTMQQDFYKEKLVERGIEVMIPGDEDMEIVNRIIFGELC 61
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ + E K++ E++ + ++L CT
Sbjct: 62 LGVISQESKRQYLRIIEEQKERGAQGVILGCT 93
>gi|159186021|ref|NP_356564.2| aspartate racemase [Agrobacterium tumefaciens str. C58]
gi|159141155|gb|AAK89349.2| aspartate racemase [Agrobacterium tumefaciens str. C58]
Length = 237
Score = 40.7 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 35/121 (28%), Gaps = 3/121 (2%)
Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V+ C NT + + +A + + A +L+T T+ + ++
Sbjct: 79 VLICTNTM--HLVADTVEKMSGVALIDIIDETAAALKADGRRKPLLLATRYTMEHGFYTD 136
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ + + + + ++ + D ++L C
Sbjct: 137 RMRQHGVDVVVPEADDRAAIHDIIFGELCQGEIKSCSRERYLAVIEKARALGVDSVILGC 196
Query: 200 T 200
T
Sbjct: 197 T 197
>gi|239834689|ref|ZP_04683017.1| Hydantoin racemase [Ochrobactrum intermedium LMG 3301]
gi|239822752|gb|EEQ94321.1| Hydantoin racemase [Ochrobactrum intermedium LMG 3301]
Length = 244
Score = 40.7 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 43/128 (33%), Gaps = 12/128 (9%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST-PAT 131
+ VIAC R +G A Q A T S S+++T P +
Sbjct: 65 EALGVDAYVIAC--FDDPGLHAAREVAKG-PVIGICQAAVQVA-MTISRRFSVITTLPRS 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +L+ Y + H V ++ L E + KEIE E
Sbjct: 121 V--AIIEDLVSEYGADRHCRKVRAIDLPVLA--LEDDSYKAEQLLLKEIERAKAE---DG 173
Query: 192 TDVIVLAC 199
+ IVL C
Sbjct: 174 AEAIVLGC 181
>gi|15674208|ref|NP_268383.1| aspartate racemase [Lactococcus lactis subsp. lactis Il1403]
gi|281492904|ref|YP_003354884.1| aspartate racemase [Lactococcus lactis subsp. lactis KF147]
gi|12725293|gb|AAK06324.1|AE006451_5 aspartate racemase [Lactococcus lactis subsp. lactis Il1403]
gi|281376556|gb|ADA66042.1| Aspartate racemase [Lactococcus lactis subsp. lactis KF147]
gi|326407815|gb|ADZ64886.1| aspartate racemase [Lactococcus lactis subsp. lactis CV56]
Length = 240
Score = 40.7 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 17/135 (12%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPA 130
+ P V+ CNTA DE++ + L P I + ++ +++L+T
Sbjct: 74 QLSPKFFVVPCNTA-HYYFDEMQKA-TEIPILHM-PRIAVDSISHHFPKAKRVAVLATEG 130
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRV-----EEYACGIKIKEDEIKKEIEGCFI 185
T+ + + ++ L +V +E + + K+ +
Sbjct: 131 TILTGVYRKALEEQGYEA---VIPDDQLQEKVNRLIYQEVKENRNLNFELYKEILSDVAS 187
Query: 186 EKEGKRTDVIVLACT 200
E +V +L CT
Sbjct: 188 EM---NCEVTILGCT 199
>gi|116630286|ref|YP_815505.1| aspartate racemase [Lactobacillus gasseri ATCC 33323]
gi|282852924|ref|ZP_06262265.1| aspartate racemase [Lactobacillus gasseri 224-1]
gi|116095868|gb|ABJ61020.1| Aspartate racemase [Lactobacillus gasseri ATCC 33323]
gi|282556032|gb|EFB61653.1| aspartate racemase [Lactobacillus gasseri 224-1]
Length = 249
Score = 40.7 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 15/135 (11%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127
K P V+ CNTA D+L + + FL ++ A + + I +++
Sbjct: 73 AKLNPDFFVMPCNTA-HYFYDDL-AALTDVPFLHM---MRIAVHTFVDNFPKEEKIGLIA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186
T ++ + + + + + V E ++ + ++
Sbjct: 128 TEGSIYDHLYVDELERVGKKVE---LGGPEIQPMVNELIYSDIKEKGIVDHDLYHKILKT 184
Query: 187 KEGK-RTDVIVLACT 200
K +VI+L CT
Sbjct: 185 MHDKYGCNVILLGCT 199
>gi|325123649|gb|ADY83172.1| putative aspartate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 236
Score = 40.7 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 75/220 (34%), Gaps = 40/220 (18%)
Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
+ +I I +GG+ + + K+ P + D P + R
Sbjct: 1 MNKAIGI----LGGMGPQATIDAMNKIIRNTPAH-----CDQEHIPVVTVSIPDIPDRTQ 51
Query: 66 FLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
+ + IL+ Q +I CNTA ++L+ + A+
Sbjct: 52 AIINQDNKPLEKMAEYLKILEAAQVGCIIIPCNTA-HFWFNQLQKRTQTKMISIVESAV- 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE----EYACG 168
+Q + IL+T AT+ ++ S + ++V +Y G
Sbjct: 110 HFIQDSQIDEVCILATSATINTELYQ---SQFIENSIGFSTPSAEMQNKVMQSIYQYKAG 166
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
+ E+ KE+ + K + +LACT PLI+
Sbjct: 167 NIQQAREMMKEVINFYTNKRNIKF---LLACTEIPLILEE 203
>gi|217959736|ref|YP_002338288.1| aspartate racemase family protein [Bacillus cereus AH187]
gi|229138929|ref|ZP_04267508.1| Aspartate racemase [Bacillus cereus BDRD-ST26]
gi|217064172|gb|ACJ78422.1| aspartate racemase family protein [Bacillus cereus AH187]
gi|228644554|gb|EEL00807.1| Aspartate racemase [Bacillus cereus BDRD-ST26]
Length = 234
Score = 40.7 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +I NT + ++++ + L A + + +L T T
Sbjct: 73 LQMGGADFIIICTNTM-HKVIEKIKKNI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 130
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + L + + V E I + E K + ++K
Sbjct: 131 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 190
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 191 AQGI---ILGCT 199
>gi|325918984|ref|ZP_08181049.1| aspartate racemase [Xanthomonas vesicatoria ATCC 35937]
gi|325534789|gb|EGD06720.1| aspartate racemase [Xanthomonas vesicatoria ATCC 35937]
Length = 136
Score = 40.7 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%)
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L T T+ + + + + + + + RV + +D +
Sbjct: 26 VGLLGTRFTMEQPFYRQRLEARGLTVVVPPAGARMELHRVIYEELCQGVIDDGSRTYFRQ 85
Query: 183 CFIEKEGKRTDVIVLACT 200
E + + IVL CT
Sbjct: 86 VMAELDRQGAQAIVLGCT 103
>gi|251797250|ref|YP_003011981.1| aspartate racemase [Paenibacillus sp. JDR-2]
gi|247544876|gb|ACT01895.1| aspartate racemase [Paenibacillus sp. JDR-2]
Length = 240
Score = 40.7 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 15/137 (10%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSG-LISILST 128
+L I CNTA +E++ ++ + V +K A SG + IL+T
Sbjct: 72 LLHDAGVSNIAIPCNTA-HCFYNEMQEM-TTIPIINMVNETLKLVADKFGSGSKVGILAT 129
Query: 129 PATLRRTYTSNL-----IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
TL S + Y I I++ ++ + EI++ IE
Sbjct: 130 DGTLHNGIYSEECENLKLKLYKPNEEIQK---RIMSIIYKKLKKNQHVNPAEIEEIIEKL 186
Query: 184 FIEKEGKRTDVIVLACT 200
+ D V+ACT
Sbjct: 187 LSDF---GCDCAVIACT 200
>gi|89901877|ref|YP_524348.1| aspartate racemase [Rhodoferax ferrireducens T118]
gi|89346614|gb|ABD70817.1| Aspartate racemase [Rhodoferax ferrireducens T118]
Length = 259
Score = 40.7 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 11/134 (8%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ +ACNTA DEL++ P + L + + + +L+T T
Sbjct: 97 LETVGVCAVAMACNTAHAW-HDELQARIPLIELLHMPREVVAYLRALRLREVGLLATQGT 155
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + CH+ + R D + CF++ +
Sbjct: 156 YRTGLYEAALAQAGITCHLPYEAERETLMR---GIYDGVKTGD--MAYAQSCFVDVAQRL 210
Query: 192 T----DV-IVLACT 200
DV +++ CT
Sbjct: 211 IGRHGDVPLIMGCT 224
>gi|261364665|ref|ZP_05977548.1| aspartate racemase [Neisseria mucosa ATCC 25996]
gi|288567274|gb|EFC88834.1| aspartate racemase [Neisseria mucosa ATCC 25996]
Length = 230
Score = 40.7 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+ ++A NT + ++ + L V A A +
Sbjct: 63 VLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAA--GIPLLHVVDATAAAIKRQGLSAV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + S Q + R+ + E +
Sbjct: 121 GLLGTRFTMSDGFYTERMGSQGVQTITPTAAEQDEIHRIIFDELCLNRIRPESARYFYDV 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 181 IGRLKNEGAQGVILGCT 197
>gi|197105440|ref|YP_002130817.1| aspartate racemase [Phenylobacterium zucineum HLK1]
gi|196478860|gb|ACG78388.1| aspartate racemase [Phenylobacterium zucineum HLK1]
Length = 230
Score = 40.7 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 52/172 (30%), Gaps = 15/172 (8%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
++ ++ L + A NT + + + A QA
Sbjct: 58 DETGRQFAEAARRLVAAGAEGLMICA-NTMHLNAPQVAEA--GGVPLIHIADATAQALKA 114
Query: 118 TQSGLISILSTPATLRRT-YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+L+T T+ + Y L + L + + + C I+E+
Sbjct: 115 RGVARPLLLATRFTMEKPFYLDRLRGQGLDGFAPEAADRERLHAIIYDELCQGVIREES- 173
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS-PWPVDW--LDNSDS 225
++E+ G D ++ CT L P + +D++ +
Sbjct: 174 RREVLGIIERGRAAGADGVIFGCT-------EIGLLLDPADMALPTVDSAVA 218
>gi|294669115|ref|ZP_06734199.1| aspartate racemase [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291308929|gb|EFE50172.1| aspartate racemase [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 230
Score = 40.7 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+ ++A NT + ++ + L V A A +
Sbjct: 63 VLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAA--GIPLLHVVDATAAAIKRQGLSAV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + S Q + R+ + E +
Sbjct: 121 GLLGTRFTMSDGFYTERMGSQGVQTITPTAAEQDEIHRIIFDELCLNRIRPESARYFYDV 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 181 IGRLKNEGAQGVILGCT 197
>gi|206978258|ref|ZP_03239137.1| aspartate racemase family protein [Bacillus cereus H3081.97]
gi|206743559|gb|EDZ54987.1| aspartate racemase family protein [Bacillus cereus H3081.97]
Length = 232
Score = 40.7 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +I NT + ++++ + L A + + +L T T
Sbjct: 71 LQMGGADFIIICTNTM-HKVIEKIKKNI-HIPVLHIADATAKEMKRKGIQTVGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + I + + L + + V E I + E K + ++K
Sbjct: 129 MEQDFYKSRIKENDIKVIVPLEKNREKINEVIYTELCLGKIVSQSREYYKTVIEDLVQKG 188
Query: 189 GKRTDVIVLACT 200
+ +L CT
Sbjct: 189 AQGI---ILGCT 197
>gi|169840382|ref|ZP_02873570.1| hypothetical protein cdivTM_25134 [candidate division TM7
single-cell isolate TM7a]
Length = 52
Score = 40.7 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 5/39 (12%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 204 LIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
L+ ++ P + +D + A + +L + +
Sbjct: 6 LLKDAISKIYP-DIKIVDPAKETALDLKEILEQNEFLKN 43
>gi|254423626|ref|ZP_05037344.1| aspartate racemase subfamily [Synechococcus sp. PCC 7335]
gi|196191115|gb|EDX86079.1| aspartate racemase subfamily [Synechococcus sp. PCC 7335]
Length = 237
Score = 40.7 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 16/146 (10%), Positives = 43/146 (29%), Gaps = 13/146 (8%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
L+ + L+ ++A NT A + ++ + A
Sbjct: 60 IANLLATAAAQLEGAGAECILLATNTMHKVAEAITLST------TIPLIHIADATADEIK 113
Query: 117 YTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKED 174
+ +L T T+ ++ L++ + + + + + + C +
Sbjct: 114 RHAIQRVGLLGTRFTMEESFYKGRLVNQHGLTVQVPNEIERHAIHDIIYNELCLGQ-TRP 172
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200
+ + + I+L CT
Sbjct: 173 ASRDQFRAVISNLVDSGAEAIILGCT 198
>gi|221065474|ref|ZP_03541579.1| aspartate racemase [Comamonas testosteroni KF-1]
gi|220710497|gb|EED65865.1| aspartate racemase [Comamonas testosteroni KF-1]
Length = 252
Score = 40.7 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159
S+ F+ + AA ++ +L T T+ + + L + + + +
Sbjct: 119 SIPFVHIADPVGAAARAAGVQVLGLLGTRFTMEQPFMRERLEQQFGLKVLVPGEAERTQV 178
Query: 160 SRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
R+ EE G D +K + + +VL CT
Sbjct: 179 HRIIYEELCAGQI--SDVSRKLYQRAIESLAARGAQAVVLGCT 219
>gi|134296325|ref|YP_001120060.1| aspartate racemase [Burkholderia vietnamiensis G4]
gi|134139482|gb|ABO55225.1| aspartate racemase [Burkholderia vietnamiensis G4]
Length = 230
Score = 40.7 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 39/136 (28%), Gaps = 7/136 (5%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT + ++ FL A +++L
Sbjct: 67 AARRLEAAGADLIVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGNALRAAGVERVALLG 124
Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCF 184
T T+ + L + + + R+ +E G +
Sbjct: 125 TRYTMELPFYAQRLRDRFGLDVLVPDEPARADVHRIIYDELCHGRIDAHS--RATYVAII 182
Query: 185 IEKEGKRTDVIVLACT 200
E + ++L CT
Sbjct: 183 DELARRGAQAVILGCT 198
>gi|228994390|ref|ZP_04154269.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
gi|228765351|gb|EEM14026.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
Length = 226
Score = 40.7 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 41/143 (28%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
++ +L+ + ++ ++ NT E S+ L +
Sbjct: 56 EEVQNQLVQVAKK-IECSGADCILMCSNT--VHQFAEEVEQAISIPLLHIGDVSAEEIVE 112
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + +Y + I V I + K
Sbjct: 113 HDVKRIGLLGTKQTMEQDFYKTRLANYGVETIIPKKDERNFIHHVILQELSKGIISQQSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 173 VRFLQIIQKLIENGAEGILLGCT 195
>gi|157163967|ref|YP_001466390.1| aspartate racemase [Campylobacter concisus 13826]
gi|112801614|gb|EAT98958.1| aspartate racemase [Campylobacter concisus 13826]
Length = 230
Score = 40.7 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 13/101 (12%)
Query: 56 EDHALKKRLMFLF-------------SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSM 102
++ R F+ + +L ++ACNTA + +
Sbjct: 41 SYAQIEDRTKFIMGEGESPLPKLIQSAKLLKNAGCEAMLMACNTAHYFAPSIEKEAGVKI 100
Query: 103 AFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS 143
+ V Y + I++++T T + ++
Sbjct: 101 LHIAKVTIDALQKKYPHAKNIAVIATSGTKKAGVYDQILKE 141
>gi|260103044|ref|ZP_05753281.1| aspartate racemase [Lactobacillus helveticus DSM 20075]
gi|260083134|gb|EEW67254.1| aspartate racemase [Lactobacillus helveticus DSM 20075]
gi|328464395|gb|EGF35804.1| aspartate racemase [Lactobacillus helveticus MTCC 5463]
Length = 249
Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 15/135 (11%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-----AYTQSGLISILS 127
DK V+ CNTA D+L + FL ++ A Y I +++
Sbjct: 73 DKLGTDYFVMPCNTA-HYFYDDL-AALTDKPFLHM---MRIAVHNFIDNYPDEKKIGLIA 127
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI-EGCFIE 186
T ++ ++ I + + V E ++ + ++
Sbjct: 128 TEGSIYDHLYADEIQKVGRTVE---LGGPEIQPMVNELIYSDIKEKGIVDHDLYHKILKT 184
Query: 187 KEGK-RTDVIVLACT 200
K +VI+L CT
Sbjct: 185 MHDKYGCNVILLGCT 199
>gi|291288437|ref|YP_003505253.1| aspartate racemase [Denitrovibrio acetiphilus DSM 12809]
gi|290885597|gb|ADD69297.1| aspartate racemase [Denitrovibrio acetiphilus DSM 12809]
Length = 230
Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 1/109 (0%)
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151
++R + S+ FL A ++L T T+ + +S +
Sbjct: 90 APDVRRSV-SIPFLHIAEATAAEINIAGYKKAALLGTRFTMEEDFLKKEFNSKGIEIITP 148
Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
M L ++ I +DE + + + +L CT
Sbjct: 149 DRDDMKLVDKIIFSELVKGIVKDESRDMLLQILDNLHEQGAQCAILGCT 197
>gi|170733497|ref|YP_001765444.1| aspartate racemase [Burkholderia cenocepacia MC0-3]
gi|169816739|gb|ACA91322.1| aspartate racemase [Burkholderia cenocepacia MC0-3]
Length = 230
Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 39/134 (29%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT + ++ FL A +++L
Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGSALRAAGVERVALLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + L + + R+ + +E + E
Sbjct: 125 TRYTMELPFYAARLREKFGLDVLVPDERGRDDVHRIIYDELCHGVISEESRATYVSIIDE 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LARRGAQAVILGCT 198
>gi|255065269|ref|ZP_05317124.1| aspartate racemase [Neisseria sicca ATCC 29256]
gi|255050690|gb|EET46154.1| aspartate racemase [Neisseria sicca ATCC 29256]
Length = 230
Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 49/142 (34%), Gaps = 12/142 (8%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+ ++A NT + ++ + L V A A +
Sbjct: 63 VLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAA--GIPLLHVVDATAAAIKRQGLSAV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE-EYACGIKIKEDEIKKEIEG 182
+L T T+ + + + S + ++ A + E ++ + I+ E
Sbjct: 121 GLLGTRFTMSDGFYTERMGSQG----VKTIA-PTTAEQDEIHRIIFDELCLNRIRPESAR 175
Query: 183 CFIE----KEGKRTDVIVLACT 200
F + + + ++L CT
Sbjct: 176 YFYDVIGRLKNEGAQGVILGCT 197
>gi|160937014|ref|ZP_02084377.1| hypothetical protein CLOBOL_01902 [Clostridium bolteae ATCC
BAA-613]
gi|158439915|gb|EDP17663.1| hypothetical protein CLOBOL_01902 [Clostridium bolteae ATCC
BAA-613]
Length = 230
Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 4/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+ +I NT ++ + + + A Q Q +
Sbjct: 63 ILGTAAKSLEAAGADFILICTNTMHKVVPQI--ESMIQIPIIHIADATAQELLACQIRKV 120
Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+L T T+ + + LI + I+ + C I+E+ +++ +
Sbjct: 121 GLLGTKYTMTQDFYKQRLIDRGIDVITPDAADIDIVNDIIFHELCVGNIREES-RRQFQV 179
Query: 183 CFIEKEGKRTDVIVLACT 200
+ K ++L CT
Sbjct: 180 VIDNLKAKGAHGVILGCT 197
>gi|160895521|ref|YP_001561103.1| aspartate racemase [Delftia acidovorans SPH-1]
gi|160361105|gb|ABX32718.1| aspartate racemase [Delftia acidovorans SPH-1]
Length = 253
Score = 40.7 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 15/156 (9%)
Query: 82 IACNTAFTLIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSG---LISILSTPATLRRTYT 137
+ACNTA +L++ FP + L +QAA + Q+G +L+T T
Sbjct: 97 LACNTA--HAWHGQLQALFPQLHVLHI---ARQAALHLQAGGAQQAIVLATQGTYDSGLY 151
Query: 138 SNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV-I 195
+ + L + + + D + + DV +
Sbjct: 152 DAALAECGITALQPDAQGRARLMQGIYDGVKQGDM--DLAARCFGEVLAPLLQRHGDVPV 209
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
++ CT PL + + +D + +A+
Sbjct: 210 IMGCTEIPLALP--QSPLARGAGLVDPAWILAQALA 243
>gi|149377025|ref|ZP_01894776.1| Aspartate racemase [Marinobacter algicola DG893]
gi|149358683|gb|EDM47154.1| Aspartate racemase [Marinobacter algicola DG893]
Length = 231
Score = 40.3 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 42/150 (28%), Gaps = 9/150 (6%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+W R++ + L +I NT + + + L A
Sbjct: 55 GDWPA---TARILSSAALSLQNAGADFLMIGTNTMHKVAPEI--ELAVRIPLLHIADATA 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIK 170
+ +L T T+ + + + + + + RV EE G
Sbjct: 110 NVLTEDGITRVGLLGTRFTMEQAFYRERLEAAGIEVVTPDAAQRAEVHRVIYEELCQGKI 169
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
++ + ++L CT
Sbjct: 170 QAAS--REAYLAVIDSLAEQGAQAVILGCT 197
>gi|91975729|ref|YP_568388.1| aspartate racemase [Rhodopseudomonas palustris BisB5]
gi|91682185|gb|ABE38487.1| aspartate racemase [Rhodopseudomonas palustris BisB5]
Length = 239
Score = 40.3 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 16/141 (11%), Positives = 40/141 (28%), Gaps = 6/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L +I NT + + + L + +
Sbjct: 61 AKVLQKIARELQAAGADCVLICTNTM--HKLADAVQSAIDVPLLNIIDICALELKAAGAR 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKE 179
+L+T T+ + + + + + + E CGI + ++
Sbjct: 119 KPLLLATRYTMEHDFYRERMGRHGVETIVPDADDRTAVHDIIFSELCCGIIRDDSRVR-- 176
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
D ++L CT
Sbjct: 177 YMDVIARGRAAGADSVILGCT 197
>gi|229153749|ref|ZP_04281890.1| Aspartate racemase [Bacillus cereus m1550]
gi|228629702|gb|EEK86389.1| Aspartate racemase [Bacillus cereus m1550]
Length = 226
Score = 40.3 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 65/206 (31%), Gaps = 31/206 (15%)
Query: 14 NSILIFDSGIGGLI------VLQKMRFL-MPEYH-----FIYVADDVGFPYGNWED---- 57
I + IGGL + + L + +Y +Y D +G
Sbjct: 2 KVIGL----IGGLSWESTSLYYKHINTLTLSQYDQNAKLILYSMD-----FGEVTTLLQN 52
Query: 58 ---HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 53 YQYEEVKNELVKVAKK-VEKSGAECLLMCSNTVHLFAEEIEQAISIPLLHIGDVSA-KEM 110
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
I +L T T+ + + + + Y + I V I +
Sbjct: 111 VEQNI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISE 169
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200
KK + + I+L CT
Sbjct: 170 TSKKRLLQITKSLIQNGAEGILLGCT 195
>gi|196046874|ref|ZP_03114095.1| aspartate racemase family protein [Bacillus cereus 03BB108]
gi|196022249|gb|EDX60935.1| aspartate racemase family protein [Bacillus cereus 03BB108]
Length = 232
Score = 40.3 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 16/137 (11%), Positives = 42/137 (30%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L +I NT ++ ++++ + L A + +
Sbjct: 63 VLGNAAYSLQSAGADFIIICTNTMHKVV-EKIKENI-HIPILHIADATAKEIKRKDIQTV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + I I + V + + ++ +
Sbjct: 121 GLLGTKYTMEQDFYKLRIEENHVNVMIPSKKDREKINEVIYTELCLGKVTSQSRQYYKRV 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 181 IEDLVQEGVQGIILGCT 197
>gi|254459871|ref|ZP_05073287.1| hydantoin racemase [Rhodobacterales bacterium HTCC2083]
gi|206676460|gb|EDZ40947.1| hydantoin racemase [Rhodobacteraceae bacterium HTCC2083]
Length = 227
Score = 40.3 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIAC D +R T S+ LG A AA+ S S+++T +
Sbjct: 66 DVDAIVIAC--FDDTGVDAVR-TLVSVPVLGIGEAAYHAASMVASK-FSVITTLSRSVPG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+NL+ ++Q + ++ I ++EE G ++I+ EI + + I
Sbjct: 122 LENNLMRYGLAQKCARVRATEIPVLKLEE---GDPDTLEKIRAEIRSAI---KEDNAEAI 175
Query: 196 VLAC 199
VL C
Sbjct: 176 VLGC 179
>gi|228993503|ref|ZP_04153412.1| amino-acid racemase [Bacillus pseudomycoides DSM 12442]
gi|228766218|gb|EEM14863.1| amino-acid racemase [Bacillus pseudomycoides DSM 12442]
Length = 235
Score = 40.3 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L EL+++ IK+ +++L+T AT
Sbjct: 78 LENTGVDFIAMPCNTA-HLYFYELQNSISVPILNMVDETIKEIPD--HVRKVALLATDAT 134
Query: 132 LRRTYTSNLIHS 143
++ + I
Sbjct: 135 VQSGIYQDGIAK 146
>gi|224367886|ref|YP_002602049.1| RacD2 [Desulfobacterium autotrophicum HRM2]
gi|223690602|gb|ACN13885.1| RacD2 [Desulfobacterium autotrophicum HRM2]
Length = 234
Score = 40.3 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 5/141 (3%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
R++ + ++ +I NT + E++ + L A + A Q
Sbjct: 61 ARILSEAAKNVESAGADFLLICTNTMHKVA-PEIQGAI-QIPLLHIADATAETLAGEQIK 118
Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179
+ +L T T+ + + L ++ + + + + + C KI+ D K
Sbjct: 119 TVGLLGTSFTMEQDFYRGRLRDTHGLNVLVPNDNDRKIVHDTIYQELCLGKIRSDS-KAA 177
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 178 FLRIIGSLADQGAEAVILGCT 198
>gi|254302674|ref|ZP_04970032.1| aspartate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148322866|gb|EDK88116.1| aspartate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 231
Score = 40.3 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 41/129 (31%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K VI NT ++ + + L I +L T T
Sbjct: 71 LEKAGADFIVICTNTMHKVVSGI--KKYTKLPILHIAEMTAIELKKAGIKKIGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+++ + ++ + I + + + V + + E K+E +
Sbjct: 129 MQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIFNELCLGKIKKESKEEYLRIIKDLSKAG 188
Query: 192 TDVIVLACT 200
++L CT
Sbjct: 189 AKGVILGCT 197
>gi|228952962|ref|ZP_04115024.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229070097|ref|ZP_04203364.1| Aspartate racemase [Bacillus cereus F65185]
gi|229079818|ref|ZP_04212350.1| Aspartate racemase [Bacillus cereus Rock4-2]
gi|228703402|gb|EEL55856.1| Aspartate racemase [Bacillus cereus Rock4-2]
gi|228713011|gb|EEL64919.1| Aspartate racemase [Bacillus cereus F65185]
gi|228806683|gb|EEM53240.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 226
Score = 40.3 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ I +L T T+ + + + + Y + I V I + K
Sbjct: 114 SI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTFIHHVILDELSRGIISETSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195
>gi|228927696|ref|ZP_04090745.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229125032|ref|ZP_04254197.1| Aspartate racemase [Bacillus cereus 95/8201]
gi|228658408|gb|EEL14083.1| Aspartate racemase [Bacillus cereus 95/8201]
gi|228831946|gb|EEM77534.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 226
Score = 40.3 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116
K + + ++K ++ NT + E + S+ +G V A K+
Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
I +L T T+ + + + + +Y + I V I +
Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISETS 171
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195
>gi|237732212|ref|ZP_04562693.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226907751|gb|EEH93669.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 229
Score = 40.3 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 39/129 (30%), Gaps = 4/129 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ VI CNTA +EL+ + L V I +L+T AT
Sbjct: 61 LEDAGAECIVIPCNTA-HFWFNELKECCHT-ELLSIVETTMNEVKNCGKSRIGLLATNAT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L I S C S +E C + + +
Sbjct: 119 LYMGLYQKGIESLGLTC--ISPDSSGQEKVMESIYCLKAGDLKRAQTLMNEQAEVLFSRG 176
Query: 192 TDVIVLACT 200
+IVL CT
Sbjct: 177 AQIIVLGCT 185
>gi|332978050|gb|EGK14788.1| glutamate racemase [Desmospora sp. 8437]
Length = 72
Score = 40.3 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Query: 219 WLDNSDSIARRARCLLPRINTHQTRVF---DDHALFLSGKPDIAMRRLMQGF 267
+ +++ R +L + ++H F SG+P +
Sbjct: 1 LISSAEETTRELIAILRGDGLLREGPPCGPEEHLFFTSGRPSSFRDIAERWL 52
>gi|228946256|ref|ZP_04108585.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228813420|gb|EEM59712.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 226
Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116
K + + ++K ++ NT + E + S+ +G + A K+
Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDISA-KEMVE 112
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
I +L T T+ + + + + +Y + I V I +
Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195
>gi|213864776|ref|ZP_03386895.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 172
Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 17/131 (12%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAAYTQSGLISILSTP 129
VI CNTA D+L++ + LG +P + + +L+T
Sbjct: 3 GAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--------HVGLLATN 53
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
ATL + + A ++ + + + +
Sbjct: 54 ATLATGLYQK--KALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAAQALLLPQIDSLIA 111
Query: 190 KRTDVIVLACT 200
+ I++ CT
Sbjct: 112 RGAQAIIMGCT 122
>gi|126642247|ref|YP_001085231.1| aspartate racemase [Acinetobacter baumannii ATCC 17978]
Length = 218
Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
L ++ + V C NT + ++ F+ A +
Sbjct: 38 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 93
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179
+++L T T+ + + + + I ++ + S + + C I D K
Sbjct: 94 RKVALLGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSIIYDELCLGLINPDSQNKY 153
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
E G+ + I+L CT
Sbjct: 154 -MTIVEELIGQGAEGIILGCT 173
>gi|300718190|ref|YP_003742993.1| aspartate racemase [Erwinia billingiae Eb661]
gi|299064026|emb|CAX61146.1| aspartate racemase [Erwinia billingiae Eb661]
Length = 232
Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 41/122 (33%), Gaps = 3/122 (2%)
Query: 80 SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V+ NT + + + + FL A +A + +++L T T+ + +
Sbjct: 79 IVLCTNTMHKVAAPIVEQS--GLPFLHIAEATAKAIQQQKMSRVALLGTRYTMEQDFYRG 136
Query: 140 -LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
L + + + ++ +R+ + K + + + I+
Sbjct: 137 PLASEFGIETLVPDAAARQEVNRIIFEQLCLGEFSPASKAYYQQVIAGLVAEGAEGIIFG 196
Query: 199 CT 200
CT
Sbjct: 197 CT 198
>gi|301119861|ref|XP_002907658.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106170|gb|EEY64222.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 269
Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 6/93 (6%)
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIH-SYVSQCHIH-LVSSMILASRVEEYACGIKI 171
A + ++ST T +L+ + ++ V L + G+K
Sbjct: 171 ANKLPSCKRVGLMSTTGTRNSRVYHDLMEPRGYTVVEVYAGVMQQELHESIYNREWGVKS 230
Query: 172 KEDEI----KKEIEGCFIEKEGKRTDVIVLACT 200
+ + + + +VI+L CT
Sbjct: 231 TAPSVSSRSEANFHRYALHLREQGAEVIILGCT 263
>gi|184158722|ref|YP_001847061.1| aspartate racemase [Acinetobacter baumannii ACICU]
gi|332873715|ref|ZP_08441658.1| aspartate racemase [Acinetobacter baumannii 6014059]
gi|183210316|gb|ACC57714.1| Aspartate racemase [Acinetobacter baumannii ACICU]
gi|322507467|gb|ADX02921.1| Aspartate racemase [Acinetobacter baumannii 1656-2]
gi|332738103|gb|EGJ68987.1| aspartate racemase [Acinetobacter baumannii 6014059]
Length = 242
Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
L ++ + V C NT + ++ F+ A +
Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179
+++L T T+ + + + + I ++ + S + + C I D K
Sbjct: 118 RKVALLGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSIIYDELCLGVINPDSQHKY 177
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
E G+ + I+L CT
Sbjct: 178 -TTIVEELIGQGAEGIILGCT 197
>gi|30250122|ref|NP_842192.1| hypothetical protein NE2188 [Nitrosomonas europaea ATCC 19718]
gi|30139229|emb|CAD86099.1| hypothetical protein NE2188 [Nitrosomonas europaea ATCC 19718]
Length = 95
Score = 40.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
+ +DVIVL CTH+ +
Sbjct: 32 LNQYLAPAVSMASDVIVLGCTHFTFLADQ 60
>gi|269138506|ref|YP_003295206.1| putative aspartate/glutamate racemase [Edwardsiella tarda EIB202]
gi|267984166|gb|ACY83995.1| putative aspartate/glutamate racemase [Edwardsiella tarda EIB202]
gi|304558529|gb|ADM41193.1| aspartate racemase [Edwardsiella tarda FL6-60]
Length = 231
Score = 40.3 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 42/141 (29%), Gaps = 7/141 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
++ + L I NT + + +++ + + A +
Sbjct: 62 HILAQAATSLRAAGAEAIAICTNTMHKVAEQVAQAS--GLPLIHIADATARQVQRQHIRR 119
Query: 123 ISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKE 179
+ +L T T+ + + L + + R+ EE G + ++E
Sbjct: 120 VGLLGTRFTMEQDFYRGRLQDKFGIDVVTPAAADRDSVHRIIYEELCLGRILDAS--RQE 177
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
E + I+ CT
Sbjct: 178 YRRIISSLEQQGAQGIIFGCT 198
>gi|228985744|ref|ZP_04145894.1| Aspartate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229156233|ref|ZP_04284329.1| Aspartate racemase [Bacillus cereus ATCC 4342]
gi|228627108|gb|EEK83839.1| Aspartate racemase [Bacillus cereus ATCC 4342]
gi|228773916|gb|EEM22332.1| Aspartate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 226
Score = 40.3 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 7/145 (4%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115
+K L+ + ++K ++ NT + E S+ +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVENAISIPLLHIGDVSA-KEMV 111
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
I +L T T+ + + + + ++ + I V I +
Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANFNIETIIPNKEERNFIHHVILNELSKGIISET 170
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195
>gi|218903772|ref|YP_002451606.1| aspartate racemase family protein [Bacillus cereus AH820]
gi|218538671|gb|ACK91069.1| aspartate racemase family protein [Bacillus cereus AH820]
Length = 226
Score = 40.3 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116
K + + ++K ++ NT + E + S+ +G V A K+
Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
I +L T T+ + + + + +Y + I V I +
Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISETS 171
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195
>gi|196032514|ref|ZP_03099928.1| aspartate racemase family protein [Bacillus cereus W]
gi|195995265|gb|EDX59219.1| aspartate racemase family protein [Bacillus cereus W]
Length = 226
Score = 39.9 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116
K + + ++K ++ NT + E + S+ +G V A K+
Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
I +L T T+ + + + + +Y + I V I +
Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195
>gi|328956897|ref|YP_004374283.1| aspartate racemase [Carnobacterium sp. 17-4]
gi|328673221|gb|AEB29267.1| aspartate racemase [Carnobacterium sp. 17-4]
Length = 234
Score = 39.9 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 41/127 (32%), Gaps = 10/127 (7%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P V+ CNTA I D + +T S+ + + + I + T TL
Sbjct: 77 PDFIVMPCNTAHYFINDLIDAT--SIPIINMIKETVATIPSNTTKKIGLAVTQGTLESQL 134
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI---KKEIEGCFIEKEGKRTD 193
+ + + + L ++ E ++ I E ++ G
Sbjct: 135 YEREL--LFNGYEVI-LPDTTLQHKINELIYTYIKEQAIINLLLYEEILEEFQQLGSDI- 190
Query: 194 VIVLACT 200
+ L CT
Sbjct: 191 TL-LGCT 196
>gi|302349008|ref|YP_003816646.1| Acetyl coenzym A synthetase (ADP-forming) [Acidilobus
saccharovorans 345-15]
gi|302329420|gb|ADL19615.1| Acetyl coenzym A synthetase (ADP-forming) [Acidilobus
saccharovorans 345-15]
Length = 712
Score = 39.9 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 39/127 (30%), Gaps = 17/127 (13%)
Query: 87 AFTLIKDELRSTFPSMAFL--GAVPAIKQAAAYTQSGLISILSTPATLR--------RTY 136
A ++ ++L+ F + L GA+P + A T SG +++T +
Sbjct: 280 ANAIVVEDLQEMFDAAKVLSSGALPRSPRVAVITNSGGHGVIATDNLVSRGLQVPQPSQA 339
Query: 137 TSNLIHSYVSQ-------CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T + + Q + + V E + + +
Sbjct: 340 TLDALKGLFPQRVSLRNPFDLTGDARPEQVELVAETLLSNNDADALLLVALVQPPTMDLN 399
Query: 190 KRTDVIV 196
K D I+
Sbjct: 400 KTFDTII 406
>gi|270262917|ref|ZP_06191188.1| hypothetical protein SOD_c05430 [Serratia odorifera 4Rx13]
gi|270043601|gb|EFA16694.1| hypothetical protein SOD_c05430 [Serratia odorifera 4Rx13]
Length = 230
Score = 39.9 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 7/125 (5%)
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
VI NT + + + + A I +L T T+ + +
Sbjct: 78 AIVICTNTMHKVA--DAVEQASGLPLIHIADATALQVRQQGIRRIGLLGTRFTMEQDFYR 135
Query: 139 -NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L + + + + R+ EE G D + E + E + I
Sbjct: 136 GRLQERHGIEVVTPTSADRDIVHRIIYEELCLGTI--RDASRDEYRRIIADLEQQGAQGI 193
Query: 196 VLACT 200
+ CT
Sbjct: 194 IFGCT 198
>gi|119945765|ref|YP_943445.1| aspartate racemase [Psychromonas ingrahamii 37]
gi|119864369|gb|ABM03846.1| aspartate racemase [Psychromonas ingrahamii 37]
Length = 229
Score = 39.9 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 49/173 (28%), Gaps = 7/173 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + + +I NT + + L A +
Sbjct: 61 AEILIEAAKNVQSAGADFLLICTNTMHKVAPQI--EKAIDIPLLHIADATAEVLVKNGIK 118
Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L T T+ + + L +Y + + V + K E
Sbjct: 119 TVGLLGTAFTMEQDFYKSRLSENYGLTVLVPNEIDRAIIHNVIYKELCLGKMLPASKVEY 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + ++L CT + + + + V LD + A++A
Sbjct: 179 LRIIESLANQGAEAVILGCT----EIGMLVEQADTKVTLLDTAAIHAQKAVEY 227
>gi|260554538|ref|ZP_05826759.1| aspartate racemase [Acinetobacter baumannii ATCC 19606]
gi|260411080|gb|EEX04377.1| aspartate racemase [Acinetobacter baumannii ATCC 19606]
Length = 242
Score = 39.9 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
L ++ + V C NT + ++ F+ A +
Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179
+++L T T+ + + + + I ++ + S + + C I D K
Sbjct: 118 RKVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSIIYDELCLGVINPDSQNKY 177
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
E G+ + I+L CT
Sbjct: 178 -MTIVEELIGQGAEGIILGCT 197
>gi|256851858|ref|ZP_05557246.1| aspartate racemase [Lactobacillus jensenii 27-2-CHN]
gi|260661881|ref|ZP_05862791.1| aspartate racemase [Lactobacillus jensenii 115-3-CHN]
gi|282931964|ref|ZP_06337428.1| aspartate racemase [Lactobacillus jensenii 208-1]
gi|297205482|ref|ZP_06922878.1| aspartate racemase [Lactobacillus jensenii JV-V16]
gi|256615816|gb|EEU21005.1| aspartate racemase [Lactobacillus jensenii 27-2-CHN]
gi|260547350|gb|EEX23330.1| aspartate racemase [Lactobacillus jensenii 115-3-CHN]
gi|281303906|gb|EFA96044.1| aspartate racemase [Lactobacillus jensenii 208-1]
gi|297150060|gb|EFH30357.1| aspartate racemase [Lactobacillus jensenii JV-V16]
Length = 250
Score = 39.9 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 52/151 (34%), Gaps = 12/151 (7%)
Query: 57 DHALKKRLMFLFSDILDKY---QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
K+ F D ++K +P V+ CNTA +L + + FL +
Sbjct: 54 KDHTKENFFFALKDDVEKQSLLKPDFFVMPCNTA-HYFYHDL-AALTDIPFLNMMDIAVH 111
Query: 114 AA--AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + I +++T ++ N I + + + V E
Sbjct: 112 HFMEKFPKEEKIGLIATEGSIFDKLYENSIVKNGRKVE---LGGNEIQPLVNELIYSDIK 168
Query: 172 KEDEIKKEIEGCFIEK--EGKRTDVIVLACT 200
+ + E+ + K + +VI+L CT
Sbjct: 169 ENGYVDGELYHRILRKMHDDYGCNVILLGCT 199
>gi|220915676|ref|YP_002490980.1| aspartate racemase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953530|gb|ACL63914.1| aspartate racemase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 234
Score = 39.9 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 39/132 (29%), Gaps = 9/132 (6%)
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151
LR P + V A + ++ ++ T T+ + + + + + +
Sbjct: 91 LPALRPRSP-LPIADLVGATCEDVRAAGHRVVGLVGTRFTVSEPFFRDALEAAGVRVVVP 149
Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIVHVFR 210
+ + K +K E+ + D +V+ACT
Sbjct: 150 DEAGTDYLDALIFGPLARGEKTPTMKGELAAIVGRMARREPLDALVVACT-------DLM 202
Query: 211 QLSPWPVDWLDN 222
L V LD
Sbjct: 203 DLMGTEVPLLDP 214
>gi|116513165|ref|YP_812072.1| aspartate racemase [Lactococcus lactis subsp. cremoris SK11]
gi|125625258|ref|YP_001033741.1| RacD protein [Lactococcus lactis subsp. cremoris MG1363]
gi|116108819|gb|ABJ73959.1| Aspartate racemase [Lactococcus lactis subsp. cremoris SK11]
gi|124494066|emb|CAL99067.1| RacD protein [Lactococcus lactis subsp. cremoris MG1363]
gi|300072068|gb|ADJ61468.1| aspartate racemase [Lactococcus lactis subsp. cremoris NZ9000]
Length = 240
Score = 39.9 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 11/132 (8%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA---AYTQSGLISILSTPA 130
+ P V+ CNTA DE++ + L P I + ++ + +++L+T
Sbjct: 74 QLSPKFFVVPCNTA-HYYFDEMQKA-TEIPILHM-PRIAVDSIGRHFSDAKRVAVLATEG 130
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + ++ L +V + + E+ +
Sbjct: 131 TILTGVYREALEEQGYEA---VIPDEELQEKVNRLIYQEVKENRNLNFELYHEILSDVAS 187
Query: 191 RT--DVIVLACT 200
+ +V +L CT
Sbjct: 188 KMNCEVTILGCT 199
>gi|228999539|ref|ZP_04159117.1| amino-acid racemase [Bacillus mycoides Rock3-17]
gi|229007097|ref|ZP_04164723.1| amino-acid racemase [Bacillus mycoides Rock1-4]
gi|228754142|gb|EEM03561.1| amino-acid racemase [Bacillus mycoides Rock1-4]
gi|228760250|gb|EEM09218.1| amino-acid racemase [Bacillus mycoides Rock3-17]
Length = 235
Score = 39.9 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + CNTA L EL++ IK+ +++L+T AT
Sbjct: 78 LENTGVDFIAMPCNTA-HLYFYELQNLISVPILNMVDETIKEIPD--HVRKVALLATDAT 134
Query: 132 LRRTYTSNLIHS 143
++ + I
Sbjct: 135 VQSGIYQDGIAK 146
>gi|30262624|ref|NP_845001.1| aspartate racemase family protein [Bacillus anthracis str. Ames]
gi|47527931|ref|YP_019280.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185467|ref|YP_028719.1| aspartate racemase family protein [Bacillus anthracis str. Sterne]
gi|65319945|ref|ZP_00392904.1| COG1794: Aspartate racemase [Bacillus anthracis str. A2012]
gi|165868472|ref|ZP_02213132.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167632270|ref|ZP_02390597.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|167637551|ref|ZP_02395830.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|170685313|ref|ZP_02876537.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|170704650|ref|ZP_02895116.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|177649807|ref|ZP_02932809.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
gi|190565232|ref|ZP_03018152.1| aspartate racemase family protein [Bacillus anthracis
Tsiankovskii-I]
gi|227814544|ref|YP_002814553.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|228915256|ref|ZP_04078850.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228933925|ref|ZP_04096768.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|229601854|ref|YP_002866941.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|254685210|ref|ZP_05149070.1| aspartate racemase family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254722617|ref|ZP_05184405.1| aspartate racemase family protein [Bacillus anthracis str. A1055]
gi|254737661|ref|ZP_05195364.1| aspartate racemase family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254743159|ref|ZP_05200844.1| aspartate racemase family protein [Bacillus anthracis str. Kruger
B]
gi|254751976|ref|ZP_05204013.1| aspartate racemase family protein [Bacillus anthracis str. Vollum]
gi|254760497|ref|ZP_05212521.1| aspartate racemase family protein [Bacillus anthracis str.
Australia 94]
gi|301054176|ref|YP_003792387.1| aspartate racemase [Bacillus anthracis CI]
gi|30257256|gb|AAP26487.1| aspartate racemase family protein [Bacillus anthracis str. Ames]
gi|47503079|gb|AAT31755.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179394|gb|AAT54770.1| aspartate racemase family protein [Bacillus anthracis str. Sterne]
gi|164715198|gb|EDR20715.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167514100|gb|EDR89467.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|167532568|gb|EDR95204.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|170130451|gb|EDS99312.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|170670673|gb|EDT21412.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|172084881|gb|EDT69939.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
gi|190563259|gb|EDV17224.1| aspartate racemase family protein [Bacillus anthracis
Tsiankovskii-I]
gi|227005097|gb|ACP14840.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|228825621|gb|EEM71411.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228844373|gb|EEM89430.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|229266262|gb|ACQ47899.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|300376345|gb|ADK05249.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
Length = 226
Score = 39.9 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116
K + + ++K ++ NT + E + S+ +G V A K+
Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
I +L T T+ + + + + +Y + I V I +
Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195
>gi|229173304|ref|ZP_04300848.1| Aspartate racemase [Bacillus cereus MM3]
gi|228609998|gb|EEK67276.1| Aspartate racemase [Bacillus cereus MM3]
Length = 226
Score = 39.9 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 7/145 (4%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115
+K L+ + ++K ++ NT + E S+ +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGADCLLMCSNTI--HLFAEEVENAISIPLLHIGDVSA-KEMV 111
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
I +L T T+ + + + + ++ + I V I +
Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANFNIETIIPTEEERNFIHHVILNELSKGIISET 170
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 171 SKEKLLQITNSLIQNGAEGILLGCT 195
>gi|49479190|ref|YP_036748.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49330746|gb|AAT61392.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 226
Score = 39.9 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116
K + + ++K ++ NT + E + S+ +G V A K+
Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
I +L T T+ + + + + +Y + I V I +
Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195
>gi|312960825|ref|ZP_07775330.1| aspartate racemase [Pseudomonas fluorescens WH6]
gi|311284483|gb|EFQ63059.1| aspartate racemase [Pseudomonas fluorescens WH6]
Length = 230
Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L V+ NT L S+ FL A AA + +
Sbjct: 63 ILEDAARRLQAGGAECVVLCTNTMHKLAPHI--EAAVSIPFLHIADAAALAAVEAGTLTV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + + + + RV + + D ++ +
Sbjct: 121 GLLGTAFTMEQDFLKSRLAGHGLTVLVPDADERKEVHRVIYEELCVGVISDTSRRTYQRV 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 181 IKSLAARGAQAIILGCT 197
>gi|196040325|ref|ZP_03107626.1| aspartate racemase family protein [Bacillus cereus NVH0597-99]
gi|196028810|gb|EDX67416.1| aspartate racemase family protein [Bacillus cereus NVH0597-99]
Length = 226
Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116
K + + ++K ++ NT + E + S+ +G V A K+
Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMVE 112
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
I +L T T+ + + + + +Y + I V I +
Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195
>gi|154175071|ref|YP_001407588.1| aspartate racemase [Campylobacter curvus 525.92]
gi|153793172|gb|EAU01193.2| aspartate racemase subfamily [Campylobacter curvus 525.92]
Length = 230
Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 44/137 (32%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + IL + I NT + + D ++S S+ + A + +
Sbjct: 63 ILAAHARILQRGGADAIFICTNTMY-KVYDAVQSAV-SVPVVHIATATLKELKRCDIDKV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + + M L + V K++
Sbjct: 121 GLLGTIYTMSEPFYKDELMRGGVEVITPNADEMKLVNDVIFDELCHGEISPASKQKFLSI 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 181 IVNLKACGAKGVILGCT 197
>gi|262279604|ref|ZP_06057389.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262259955|gb|EEY78688.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 247
Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 45/131 (34%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K ++ NT + ++ F+ A + +++L T T
Sbjct: 71 LEKAGAECILVCTNTMHKIAPQI--EDAITVPFIHIADATAKEIVSQDIRKVALLGTAFT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + + I + + + EE G+ + +++ E
Sbjct: 129 MEQDFYKARLQDHGIDVIIPNEADRKIVHHIIYEELCLGVINSDS--RQKYETIVEALIT 186
Query: 190 KRTDVIVLACT 200
+ + I+L CT
Sbjct: 187 EGAEGIILGCT 197
>gi|228997618|ref|ZP_04157228.1| Aspartate racemase [Bacillus mycoides Rock3-17]
gi|228762127|gb|EEM11063.1| Aspartate racemase [Bacillus mycoides Rock3-17]
Length = 226
Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 42/143 (29%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
++ +L+ + ++ ++ NT E S+ L +
Sbjct: 56 EEVQNQLVQVAKK-IECSGADCILMCSNT--VHQFAEEVEQAISIPLLHIGDVSAEEIVE 112
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + +Y + I V + I + K
Sbjct: 113 HDVKRIGLLGTKQTMEQDFYKTRLANYGVETIIPKEDERNFIHHVILHELSKGIISQQSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 173 VRFLQIIQKLIENGAEGILLGCT 195
>gi|222107169|ref|YP_002547960.1| hydantoin Racemase [Agrobacterium vitis S4]
gi|221738348|gb|ACM39244.1| hydantoin Racemase [Agrobacterium vitis S4]
Length = 258
Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 19/131 (14%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K ++IAC D R+ S+ +G A ++ S T+
Sbjct: 65 EKQGADAAIIAC--FDDTGLDAARA-LASIPVIGICEAAIATVSFIAQK----FSVVTTM 117
Query: 133 RRTYT--SNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
R+ +L+ Y + +C + +L D ++ EI + +
Sbjct: 118 ERSRLPIEHLVRRYGASDRCKVRAADIPVL-----SLEDPSSNARDRLRAEIAKALAQDD 172
Query: 189 GKRTDVIVLAC 199
+ I+L C
Sbjct: 173 A---EAIILGC 180
>gi|47569596|ref|ZP_00240273.1| aspartate racemase [Bacillus cereus G9241]
gi|47553711|gb|EAL12085.1| aspartate racemase [Bacillus cereus G9241]
Length = 226
Score = 39.9 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 7/145 (4%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115
+K L+ + ++K ++ NT + E + S+ +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMV 111
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
I +L T T+ + + + + +Y + I V I +
Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNKEERNFIHHVILNELSKGIISET 170
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195
>gi|229005219|ref|ZP_04162937.1| Aspartate racemase [Bacillus mycoides Rock1-4]
gi|228756030|gb|EEM05357.1| Aspartate racemase [Bacillus mycoides Rock1-4]
Length = 226
Score = 39.9 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 42/143 (29%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
++ +L+ + ++ ++ NT E S+ L +
Sbjct: 56 EEVQNQLVQVAKK-IECSGADCILMCSNT--VHQFAEEVEQAISIPLLHIGDVSAEEIVE 112
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + +Y + I V + I + K
Sbjct: 113 HDVKRIGLLGTKQTMEQDFYKTRLANYGVETIIPKEDERNFIHHVILHELSKGIISQQSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+ + I+L CT
Sbjct: 173 VRFLQIIQKLIENGAEGILLGCT 195
>gi|147819141|emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]
Length = 330
Score = 39.9 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 58/175 (33%), Gaps = 28/175 (16%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--------L 122
L++ V+ C+ + + S S+ FL + + +
Sbjct: 158 FLERSGVQCIVMPCH--ISHSWHDEISRGXSVPFLHMGECVARELKNAKLKPLEAGSPLR 215
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYAC-GIKIKEDEIKKE 179
I +L+T ATL + + + + ++M + +E ++ + ++
Sbjct: 216 IGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEALNRKDMEGARNLLRIA 275
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230
++ + + + ++LA L P +D D++AR
Sbjct: 276 LQVLLV----RAVNTVILA-------SDDMHDLLPRDDPLLKKCVDPMDALARST 319
>gi|304439661|ref|ZP_07399563.1| possible aspartate racemase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371841|gb|EFM25445.1| possible aspartate racemase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 235
Score = 39.9 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 11/122 (9%)
Query: 82 IA--CNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
IA CNT F ++L + F+ + I A +++IL T TL+
Sbjct: 81 IAASCNT-FHNFLEDL-EKLTDIPFINMID-ITTEEAKKHGNVVTILGTKGTLQTGIYDK 137
Query: 140 LIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
I Y + L + +K + + + + +LA
Sbjct: 138 YIEKYGLEHLRVDDKIEDELMDIIYYIKSTNDVKSKRLNEICKYYLDQGSIP-----ILA 192
Query: 199 CT 200
CT
Sbjct: 193 CT 194
>gi|239501409|ref|ZP_04660719.1| aspartate racemase [Acinetobacter baumannii AB900]
Length = 242
Score = 39.9 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
L ++ + V C NT + ++ F+ A +
Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179
+++L T T+ + + + + I ++ + S + + C I D K
Sbjct: 118 RKVALLGTAFTMEQDFYKARLQDREIEVIIPNDANRKIVHSIIYDELCLGVINPDSQNKY 177
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
E G+ + I+L CT
Sbjct: 178 -MTIVEELIGQGAEGIILGCT 197
>gi|229817369|ref|ZP_04447651.1| hypothetical protein BIFANG_02631 [Bifidobacterium angulatum DSM
20098]
gi|229785158|gb|EEP21272.1| hypothetical protein BIFANG_02631 [Bifidobacterium angulatum DSM
20098]
Length = 241
Score = 39.9 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 37/135 (27%), Gaps = 14/135 (10%)
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYT---QSGLISILSTPA 130
V+ CNTA + + L A+K+ + ++ + L T
Sbjct: 76 MGASFIVLTCNTA--HYFHDRFQALTDVPILHMPREAVKRLSQLYPAGRTTRVGFLGTVG 133
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI-----KKEIEGCFI 185
+ + + + L +R+ E+ + +
Sbjct: 134 SRASGVYKHAVEE-AGYTFVE--PDDALQARITSLIYDDVKGSGELNLNRYESVLRDMLD 190
Query: 186 EKEGKRTDVIVLACT 200
D ++L CT
Sbjct: 191 PAGPCACDALILGCT 205
>gi|193215155|ref|YP_001996354.1| aspartate racemase [Chloroherpeton thalassium ATCC 35110]
gi|193088632|gb|ACF13907.1| aspartate racemase [Chloroherpeton thalassium ATCC 35110]
Length = 244
Score = 39.9 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 38/141 (26%), Gaps = 6/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
K L I L + C NT + + + L A + +
Sbjct: 70 KILSEAAIRIQAAGADFLLI--CTNTMHKVAPEI--DAAIQIPLLHIADATAEVLISSGI 125
Query: 121 GLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ +L T T+ + + L Y + +V I E K E
Sbjct: 126 KSVGLLGTAFTMEQEFYKGRLADKYGLHVLVPNEHDRHFIHKVIYEELCIGKAESHSKAE 185
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
+ + +L CT
Sbjct: 186 YLRIIESLANQGAEAAILGCT 206
>gi|297743412|emb|CBI36279.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 39.5 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 59/175 (33%), Gaps = 28/175 (16%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--------L 122
L++ V+ C+ + + S S+ FL + + +
Sbjct: 269 FLERSGVQCIVMPCH--ISHSWHDEISRGSSVPFLHMGECVARELKNAKLKPLEAGSPLR 326
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYAC-GIKIKEDEIKKE 179
I +L+T ATL + + + + ++M + +E + ++ + ++
Sbjct: 327 IGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEAFNRKDMEGARNLLRIA 386
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230
++ + + + ++LA L P +D D++AR
Sbjct: 387 LQVLLV----RAVNTVILA-------SDDMHDLLPRDDPLLKKCVDPMDALARST 430
>gi|228920937|ref|ZP_04084275.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228838726|gb|EEM84029.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 146
Score = 39.5 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 34/102 (33%), Gaps = 4/102 (3%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160
+ L A + + +L T T+ + + + I + + + +
Sbjct: 13 DIPVLHIADATAKEIKRKDIQKVGLLGTKYTMEQDFYKSRIEENNIKVIVPSEKNRKEIN 72
Query: 161 RV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+V E G + + ++ + E K I+L CT
Sbjct: 73 KVIYTELCLGKIVSQS--REYYKRVIEELVQKGAQGIILGCT 112
>gi|169795477|ref|YP_001713270.1| putative aspartate/glutamate racemase [Acinetobacter baumannii AYE]
gi|213158584|ref|YP_002319882.1| aspartate racemase [Acinetobacter baumannii AB0057]
gi|215482962|ref|YP_002325167.1| aspartate racemase [Acinetobacter baumannii AB307-0294]
gi|301345799|ref|ZP_07226540.1| aspartate racemase [Acinetobacter baumannii AB056]
gi|301513552|ref|ZP_07238789.1| aspartate racemase [Acinetobacter baumannii AB058]
gi|301597162|ref|ZP_07242170.1| aspartate racemase [Acinetobacter baumannii AB059]
gi|332855204|ref|ZP_08435755.1| aspartate racemase [Acinetobacter baumannii 6013150]
gi|332872017|ref|ZP_08440404.1| aspartate racemase [Acinetobacter baumannii 6013113]
gi|169148404|emb|CAM86269.1| putative Aspartate/Glutamate racemase [Acinetobacter baumannii AYE]
gi|213057744|gb|ACJ42646.1| aspartate racemase [Acinetobacter baumannii AB0057]
gi|213985943|gb|ACJ56242.1| aspartate racemase [Acinetobacter baumannii AB307-0294]
gi|332727581|gb|EGJ59003.1| aspartate racemase [Acinetobacter baumannii 6013150]
gi|332731050|gb|EGJ62353.1| aspartate racemase [Acinetobacter baumannii 6013113]
Length = 242
Score = 39.5 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
L ++ + V C NT + ++ F+ A +
Sbjct: 62 AYLAEQAQNLEKAGADCILV--CTNTMHKVAPQI--EDAITVPFIHIADATAKEILSQNI 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKE 179
+++L T T+ + + + + I ++ + S + + C I D K
Sbjct: 118 RKVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSIIYDELCLGVINPDSQHKY 177
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
E G+ + I+L CT
Sbjct: 178 -TTIVEELIGQGAEGIILGCT 197
>gi|317407387|gb|EFV87351.1| aspartate racemase [Achromobacter xylosoxidans C54]
Length = 231
Score = 39.5 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 28/87 (32%)
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L T + + + + L +RV + + E +
Sbjct: 122 RRIGLLGTRWLVDSAVYPDKLRARGLDYVRPAPDDRDLLARVIMDELVYGVFKPESVALL 181
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVH 207
+G D +VL CT PL++
Sbjct: 182 QGVVARLRDAGCDAVVLGCTELPLVLD 208
>gi|221214797|ref|ZP_03587766.1| aspartate racemase [Burkholderia multivorans CGD1]
gi|221165336|gb|EED97813.1| aspartate racemase [Burkholderia multivorans CGD1]
Length = 230
Score = 39.5 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 36/134 (26%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT + ++ FL A +++L
Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAITLPFLHIADPTGAALRDAGVERVALLG 124
Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + L + + R+ I E +
Sbjct: 125 TRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIVARESRAAYVRIIES 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAQRGAQAVILGCT 198
>gi|262280271|ref|ZP_06058055.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262258049|gb|EEY76783.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 236
Score = 39.5 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 76/224 (33%), Gaps = 41/224 (18%)
Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
+ +I I +GG+ + + K+ P + D P + R
Sbjct: 1 MNKAIGI----LGGMGPQATIDAMNKIIKNTPAH-----CDQEHIPVITVSIPDIPDRTQ 51
Query: 66 FLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
+ + IL+ Q +I CNTA ++L+ + + + +
Sbjct: 52 SIINHDDKPLEKMAEYLKILEAAQVGCIIIPCNTA-HFWFNQLQQRTQTK-MISIIESAV 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE----EYACG 168
+Q + IL+T AT+ ++ S+ + +V +Y G
Sbjct: 110 HFIQDSQIAEVCILATSATISTQLYQ---SQFIQNNIRFSTPSVEMQHKVMQSIYQYKAG 166
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL-IVHVFRQ 211
K ++ E+ + + + + +LACT PL + +
Sbjct: 167 NIEKSKQLMSEVIHFYRQNKSIKF---LLACTEIPLILQDSIQD 207
>gi|332186103|ref|ZP_08387849.1| aspartate racemase family protein [Sphingomonas sp. S17]
gi|332013918|gb|EGI55977.1| aspartate racemase family protein [Sphingomonas sp. S17]
Length = 231
Score = 39.5 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 41/150 (27%), Gaps = 16/150 (10%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
L +R+ + VL + C NT + L A
Sbjct: 58 EGLTQRMTDAARRLEAGGAEVLLI--CTNTM--HRMAPAVQAAIGIPLLHIADPTAAAIK 113
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHS------YVSQCHIHLVSSMILASRVEEYACGIK 170
+++L T T+ + + + + I+ + +
Sbjct: 114 AAGFQKVALLGTAFTMEHDFYKGRLERQHGLNVIIPDAQDRALVHRIIYDELVAGQINAQ 173
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ ++ I+ E + ++L CT
Sbjct: 174 -SREAFRQIIDRMITE----GAEAVILGCT 198
>gi|262039857|ref|ZP_06013130.1| aspartate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|330011202|ref|ZP_08307021.1| aspartate racemase [Klebsiella sp. MS 92-3]
gi|259042762|gb|EEW43760.1| aspartate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|328534256|gb|EGF60874.1| aspartate racemase [Klebsiella sp. MS 92-3]
Length = 253
Score = 39.5 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 11/142 (7%)
Query: 64 LMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
++ + L + V+ NT A + + FL A +A A
Sbjct: 79 ILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARC------QVPFLHIADATGRAIAAKG 132
Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+++L T T+ +T+ L + + I +++ + + +
Sbjct: 133 QRRVALLGTRYTMEQTFYRGRLQEQFAIETLIPEADDRAQINQIIFDELCLGTFSEASRD 192
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
+ + ++ CT
Sbjct: 193 YYLQTIAALAEQGAEGVIFGCT 214
>gi|229091655|ref|ZP_04222856.1| Aspartate racemase [Bacillus cereus Rock3-42]
gi|228691600|gb|EEL45352.1| Aspartate racemase [Bacillus cereus Rock3-42]
Length = 226
Score = 39.5 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 6/144 (4%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116
K + + ++K ++ NT K+ + S+ +G V A K+
Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNTVHLFAKEV--ESAISIPLLHIGDVSA-KEMVE 112
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
I +L T T+ + + + + +Y + I V I +
Sbjct: 113 QNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEIS 171
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 172 KEKLLQITKSLIQNGAEGILLGCT 195
>gi|228958869|ref|ZP_04120575.1| Aspartate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229110094|ref|ZP_04239670.1| Aspartate racemase [Bacillus cereus Rock1-15]
gi|229148078|ref|ZP_04276413.1| Aspartate racemase [Bacillus cereus BDRD-ST24]
gi|296503209|ref|YP_003664909.1| aspartate racemase [Bacillus thuringiensis BMB171]
gi|228635383|gb|EEK91878.1| Aspartate racemase [Bacillus cereus BDRD-ST24]
gi|228673286|gb|EEL28554.1| Aspartate racemase [Bacillus cereus Rock1-15]
gi|228800806|gb|EEM47717.1| Aspartate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|296324261|gb|ADH07189.1| aspartate racemase [Bacillus thuringiensis BMB171]
Length = 226
Score = 39.5 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 65/206 (31%), Gaps = 31/206 (15%)
Query: 14 NSILIFDSGIGGLI------VLQKMRFL-MPEYH-----FIYVADDVGFPYGNWED---- 57
I + IGGL + + L + +Y +Y D +G
Sbjct: 2 KVIGL----IGGLSWESTSLYYKHINTLTLSQYDQNAKLILYSMD-----FGEVTTLLQN 52
Query: 58 ---HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 53 HQYEEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEM 110
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
I +L T T+ + + + + Y + I V I +
Sbjct: 111 VEQNI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISE 169
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200
KK + + I+L CT
Sbjct: 170 TSKKRLLQITKSLIQNGAEGILLGCT 195
>gi|218234088|ref|YP_002367372.1| aspartate racemase family protein [Bacillus cereus B4264]
gi|218162045|gb|ACK62037.1| aspartate racemase family protein [Bacillus cereus B4264]
Length = 226
Score = 39.5 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 65/206 (31%), Gaps = 31/206 (15%)
Query: 14 NSILIFDSGIGGLI------VLQKMRFL-MPEYH-----FIYVADDVGFPYGNWED---- 57
I + IGGL + + L + +Y +Y D +G
Sbjct: 2 KVIGL----IGGLSWESTSLYYKHINTLTLSQYDQNAKLILYSMD-----FGEVTTLLQN 52
Query: 58 ---HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 53 YQYEEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEM 110
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
I +L T T+ + + + + Y + I V I +
Sbjct: 111 VEQNI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISE 169
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACT 200
KK + + I+L CT
Sbjct: 170 TSKKRLLQITKSLIQNGAEGILLGCT 195
>gi|121535491|ref|ZP_01667300.1| aspartate racemase [Thermosinus carboxydivorans Nor1]
gi|121305910|gb|EAX46843.1| aspartate racemase [Thermosinus carboxydivorans Nor1]
Length = 236
Score = 39.5 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 56/168 (33%), Gaps = 14/168 (8%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA----IKQAAAYTQSGLISIL 126
L++ + CNTA ++++ ++ + + I + I +L
Sbjct: 69 FLEQAGADFIAMPCNTA-HYWYNDIQQAI-NIPLINMIDLTVDYIADKYPHAAVSPIMLL 126
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT++ + + + + S+ + I E+ + +
Sbjct: 127 ATAATVKVGLYQQRFAARGMEILVPTAQEQQIISQAIDAVKAGTINENPYLDALRQFMTD 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN----SDSIARRA 230
+ CT PL+ F ++ D +D + + RRA
Sbjct: 187 YSQNGVIAFIAGCTEIPLL---FAHIAG-NFDKIDPTLLLAQEVVRRA 230
>gi|75762859|ref|ZP_00742675.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74489652|gb|EAO53052.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 246
Score = 39.5 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 76 EEVKNELVTVAKK-VEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVKQ 133
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + + Y + I + V I + K
Sbjct: 134 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVILDELSKGIISEASK 192
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 193 EKLLQITKSLIQNGAEGILLGCT 215
>gi|237709857|ref|ZP_04540338.1| aspartate racemase [Bacteroides sp. 9_1_42FAA]
gi|229455950|gb|EEO61671.1| aspartate racemase [Bacteroides sp. 9_1_42FAA]
Length = 244
Score = 39.5 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 23/188 (12%), Positives = 50/188 (26%), Gaps = 31/188 (16%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ + + + + L + CNTA +EL + F + + +
Sbjct: 61 IEDYVEIGRKMKECGCTKLC-MCCNTA-HYAIEELSEKI-GLPFFNLLDLVALKVKEIRC 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ + + V + V + C K K +
Sbjct: 118 TKIGMMCSDGLRKVGIYEERFARLVPNVT-FVYPDREYQDIVTKGICNAKHKIRFTDSSV 176
Query: 181 EGCFIEKE----------GKRTDVIVLACTHYPLIVHVFRQLSP------WPVDWLDN-- 222
E K D IV CT + + ++D+
Sbjct: 177 EPLHPNNLFTSVCSHLINDKNVDCIVGGCT-------DISNVFAFPFSIYEDIKYIDSLD 229
Query: 223 --SDSIAR 228
+++I +
Sbjct: 230 ILAEAIVK 237
>gi|302557714|ref|ZP_07310056.1| Asp/Glu racemase [Streptomyces griseoflavus Tu4000]
gi|302475332|gb|EFL38425.1| Asp/Glu racemase [Streptomyces griseoflavus Tu4000]
Length = 305
Score = 39.5 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 64/188 (34%), Gaps = 35/188 (18%)
Query: 60 LKKRLMFLFSDILDKYQPVLS--------VIACNTAFTLIKDELRSTFPSMAFLGAVPAI 111
L++R++ L ++D L V+ NTA L ++ L + A+
Sbjct: 56 LRRRMLRLIGHVIDGGAQALLLTCSSYGDVV--NTAHAL---------WNVPVLKSDEAM 104
Query: 112 KQAAAYTQSGLISILS-TPATL--RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168
+AA I +++ TP + L+ + +V++ EE A
Sbjct: 105 FRAALSGPYRRIGVVASTPPAVPAAVAQLEALVPEVRPDRPVGIVTA-----LSEEAATA 159
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL--IVHVFRQLSPWPVDWLDNSDSI 226
+ + G D ++LA Y L L V LD + +
Sbjct: 160 G--DPGAAARHLADALYATGGAEVDAVLLA--QYSLTPAREALAALLG--VPVLDGAGAA 213
Query: 227 ARRARCLL 234
AR R LL
Sbjct: 214 ARELRALL 221
>gi|260774322|ref|ZP_05883237.1| aspartate racemase [Vibrio metschnikovii CIP 69.14]
gi|260611283|gb|EEX36487.1| aspartate racemase [Vibrio metschnikovii CIP 69.14]
Length = 235
Score = 39.5 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151
++ + + F+ A +A + ++ T+ + +++S+ + +
Sbjct: 91 MPAMKDKY-DVEFVDIRDATAKAIQSFGLDRVGLIGVQKTMETEFYKGVLNSFSIEAVVP 149
Query: 152 LVSSMILAS--RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ S V E +DE K E + ++L CT PL+++
Sbjct: 150 KLDSRKYIHQKIVSELVLNKF--KDETKYGFLSVIDELVEQNVQGVILGCTEIPLLLN 205
>gi|15603491|ref|NP_246565.1| hypothetical protein PM1626 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12722027|gb|AAK03710.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 230
Score = 39.5 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 47/137 (34%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + ++A NT + + + FL + A +A +
Sbjct: 63 ILATAAKKLTQIGAEGILLATNTMHKVAPQII--DVIDVPFLHIIDATAKAIKIKNLTQV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++L T T++ + +L+ + + R+ + + E K+
Sbjct: 121 ALLGTQFTMQDPFYRDLLLHHGITPLVPNQKQQQEIHRIIFTELCVGQIKPESKQFYLDV 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 181 INDLAKQGAQGVILGCT 197
>gi|294141427|ref|YP_003557405.1| aspartate racemase [Shewanella violacea DSS12]
gi|293327896|dbj|BAJ02627.1| aspartate racemase [Shewanella violacea DSS12]
Length = 231
Score = 39.5 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 5/103 (4%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159
S+ L A + +L T T+ + + L + + + +
Sbjct: 98 SIPLLHIADATAHKLIGDGIKTVGLLGTQFTMEQDFYKGRLTEKFAIEVLTPNIRQREVV 157
Query: 160 SRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
V EE GI + + + + ++L CT
Sbjct: 158 HSVIYEELCLGIIKSDS--RDAYLAIIEDLYRQGAQAVILGCT 198
>gi|24209687|gb|AAN41452.1| putative aminoacid racemase Orfc372-4 [Vibrio metschnikovii]
Length = 235
Score = 39.5 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151
++ + + F+ A +A + ++ T+ + +++S+ + +
Sbjct: 91 MPAMKDKY-DVEFVDIRDATAKAIQSFGLDRVGLIGVQKTMETEFYKGVLNSFSIEAVVP 149
Query: 152 LVSSMILAS--RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ S V E +DE K E + ++L CT PL+++
Sbjct: 150 KLDSRKYIHQKIVSELVLNKF--KDETKYGFLSVIDELVEQNVQGVILGCTEIPLLLN 205
>gi|118478023|ref|YP_895174.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|196043544|ref|ZP_03110782.1| aspartate racemase family protein [Bacillus cereus 03BB108]
gi|225864623|ref|YP_002750001.1| aspartate racemase family protein [Bacillus cereus 03BB102]
gi|229184870|ref|ZP_04312061.1| Aspartate racemase [Bacillus cereus BGSC 6E1]
gi|118417248|gb|ABK85667.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|196025853|gb|EDX64522.1| aspartate racemase family protein [Bacillus cereus 03BB108]
gi|225785651|gb|ACO25868.1| aspartate racemase family protein [Bacillus cereus 03BB102]
gi|228598523|gb|EEK56152.1| Aspartate racemase [Bacillus cereus BGSC 6E1]
Length = 226
Score = 39.2 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 43/142 (30%), Gaps = 2/142 (1%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
K + + ++K ++ NT + E + S+ L +
Sbjct: 56 EEVKNALVTVAKKVEKSGADCLLMCSNT--VHLFAEEVESAISIPLLHIGDVSAKEMVDQ 113
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
I +L T T+ + + + + Y + I V I + K+
Sbjct: 114 NIKRIGLLGTKQTMEQDFYKSRLAHYNIETIIPNEEERNFIHHVILNELSKGIISETSKE 173
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
++ + I+L CT
Sbjct: 174 KLLQITKSLIQNGAEGILLGCT 195
>gi|206560577|ref|YP_002231342.1| putative racemase [Burkholderia cenocepacia J2315]
gi|198036619|emb|CAR52516.1| putative racemase [Burkholderia cenocepacia J2315]
Length = 230
Score = 39.2 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 37/134 (27%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT + ++ FL A +++L
Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGSALRAAGVERVALLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + L + + R+ + + +
Sbjct: 125 TRYTMELPFYAARLREKFGLDVLVPDEPGRDDVHRIIYDELCHGVISAQSRATYVSIIDA 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LATRGAQAVILGCT 198
>gi|224070839|ref|XP_002303258.1| predicted protein [Populus trichocarpa]
gi|222840690|gb|EEE78237.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 39.2 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 38/115 (33%), Gaps = 16/115 (13%)
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKE 179
I +L++ ATL + + + + + ++M + +E + +
Sbjct: 215 RIGLLASNATLAAGFYQEKLQNEGFEVVLPDKATMEHTIIPAIEALDRNDMEGAQNLLRI 274
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230
+ + + ++LA R + P +D D++AR
Sbjct: 275 ALQVLL---VRAVNTVILA-------SEEMRDVLPEDDPLLKKCIDPMDALARST 319
>gi|218897646|ref|YP_002446057.1| aspartate racemase family protein [Bacillus cereus G9842]
gi|228905578|ref|ZP_04069526.1| Aspartate racemase [Bacillus thuringiensis IBL 4222]
gi|218542682|gb|ACK95076.1| aspartate racemase family protein [Bacillus cereus G9842]
gi|228854053|gb|EEM98763.1| Aspartate racemase [Bacillus thuringiensis IBL 4222]
Length = 226
Score = 39.2 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVKQ 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + + Y + I + V I + K
Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVILDELSKGIISEASK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195
>gi|330817679|ref|YP_004361384.1| putative racemase [Burkholderia gladioli BSR3]
gi|327370072|gb|AEA61428.1| putative racemase [Burkholderia gladioli BSR3]
Length = 230
Score = 39.2 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 36/134 (26%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L + V+ NT + ++ FL A +++L
Sbjct: 67 AARQLQAAGADVVVLTTNTM--HRVADAIERALTLPFLHIADPTGTALRAAGVERVALLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + L + + RV + E +
Sbjct: 125 TRYTMELPFYAARLAERFGIEVLTPDAEDRDTVHRVIYEELCHGLIEPASRAAYAAIIGR 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAARGAQAVILGCT 198
>gi|317491295|ref|ZP_07949731.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920842|gb|EFV42165.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 233
Score = 39.2 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 43/141 (30%), Gaps = 6/141 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ L + + V C NT + +++ S + L A
Sbjct: 62 ELLADAAQRLQAAGAEGIVV--CTNTMHKVA-EQIESRC-GLPLLHIADATAARIKAQGL 117
Query: 121 GLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
I +L T T+ + + L + + + S + R+ + E +++
Sbjct: 118 TRIGLLGTRFTMEQDFYRGRLTDKFGIEVIVPNESDREVIHRIIYQELCLGQIRPESRQQ 177
Query: 180 IEGCFIEKEGKRTDVIVLACT 200
+ I+L CT
Sbjct: 178 YREIMQRLSEQSAQGIILGCT 198
>gi|228965574|ref|ZP_04126656.1| Aspartate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228794167|gb|EEM41688.1| Aspartate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 226
Score = 39.2 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 11/168 (6%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVKQ 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + + Y + I + V I + K
Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVILDELSKGIISEASK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNS 223
+++ + I+L CT PL+ +SP V D +
Sbjct: 173 EKLLQITKSLIQNGAEGILLGCTEIPLL------ISPNDLTVPVFDTA 214
>gi|222096164|ref|YP_002530221.1| aspartate racemase [Bacillus cereus Q1]
gi|229196823|ref|ZP_04323564.1| Aspartate racemase [Bacillus cereus m1293]
gi|221240222|gb|ACM12932.1| aspartate racemase [Bacillus cereus Q1]
gi|228586546|gb|EEK44623.1| Aspartate racemase [Bacillus cereus m1293]
Length = 226
Score = 39.2 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 7/145 (4%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115
+K L+ + ++K ++ NT + E + S+ +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMV 111
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
I +L T T+ + + + + +Y + I V I +
Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELSKGIISET 170
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195
>gi|227818888|ref|YP_002822859.1| hypothetical protein NGR_b06480 [Sinorhizobium fredii NGR234]
gi|36959148|gb|AAQ87573.1| Hypothetical protein RNGR00448 [Sinorhizobium fredii NGR234]
gi|227337887|gb|ACP22106.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 234
Score = 39.2 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 19/151 (12%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF----LGAV 108
G +++ ++S +D + V T +L + + P +
Sbjct: 53 GTLSRQTMRRLATHIWSA-VDAGASAVLV----TCSSLG-PAVDAAMPLCPVPLFRIDDG 106
Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYAC 167
AI+ A + I +L+T AT T+ LI + + V+ + ++
Sbjct: 107 MAIE---AINRGNRIGVLATLATTMEP-TTRLIERHAQRMNRDVSVTGRLCEGAFDKLRN 162
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
G + D + +E+ + DVIVLA
Sbjct: 163 GDRAAHDAMIREVLASLV----NSVDVIVLA 189
>gi|298294028|ref|YP_003695967.1| Asp/Glu/hydantoin racemase [Starkeya novella DSM 506]
gi|296930539|gb|ADH91348.1| Asp/Glu/hydantoin racemase [Starkeya novella DSM 506]
Length = 229
Score = 39.2 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKED 174
A Q I +L+T +T T+ LI + ++ ++S + A E+ A G + D
Sbjct: 110 ALEQGRRIGVLATLSTTLEP-TAALIERHAAEAGRPLTLTSHLCAGAFEKLAQGDRADHD 168
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLA 198
+ +E E + D +VLA
Sbjct: 169 ALVREG----FEAVAGKVDAVVLA 188
>gi|261251110|ref|ZP_05943684.1| aspartate racemase [Vibrio orientalis CIP 102891]
gi|260937983|gb|EEX93971.1| aspartate racemase [Vibrio orientalis CIP 102891]
Length = 230
Score = 39.2 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 37/130 (28%), Gaps = 3/130 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ +IA NT + + S+ L + + +L T T
Sbjct: 71 VERAGADFVLIATNTMHKVAEQV--EEAISIPLLHIADTTGEVLVEKGITKVGLLGTAFT 128
Query: 132 LRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + L + + + L V + K + + +
Sbjct: 129 MEEAFYKQRLSDKFGIEVVVPNGVQRRLVHDVIYNELCLGKANRRSKDDFHTIISDLAER 188
Query: 191 RTDVIVLACT 200
++L CT
Sbjct: 189 GAQGVILGCT 198
>gi|288933699|ref|YP_003437758.1| aspartate racemase [Klebsiella variicola At-22]
gi|290511221|ref|ZP_06550590.1| aspartate racemase [Klebsiella sp. 1_1_55]
gi|288888428|gb|ADC56746.1| aspartate racemase [Klebsiella variicola At-22]
gi|289776214|gb|EFD84213.1| aspartate racemase [Klebsiella sp. 1_1_55]
Length = 237
Score = 39.2 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 45/142 (31%), Gaps = 11/142 (7%)
Query: 64 LMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
++ + L + V+ NT A + + FL A +A A
Sbjct: 63 ILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARC------QVPFLHIADATGRAIAAKG 116
Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+++L T T+ +T+ L+ + + I +++ + + +
Sbjct: 117 QRRVALLGTRYTMEQTFYRGRLLEQFAIETLIPEADDRARINQIIFDELCLGTFSEASRD 176
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
+ + ++ CT
Sbjct: 177 YYLQVIAALAEQGAEGVIFGCT 198
>gi|206973563|ref|ZP_03234481.1| aspartate racemase family protein [Bacillus cereus H3081.97]
gi|206747719|gb|EDZ59108.1| aspartate racemase family protein [Bacillus cereus H3081.97]
Length = 226
Score = 39.2 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 7/145 (4%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115
+K L+ + ++K ++ NT + E + S+ +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMV 111
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
I +L T T+ + + + + +Y + I V I +
Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELSKGIISET 170
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195
>gi|240948955|ref|ZP_04753311.1| RacX protein [Actinobacillus minor NM305]
gi|240296770|gb|EER47381.1| RacX protein [Actinobacillus minor NM305]
Length = 230
Score = 39.2 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 6/131 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ ++A NT + K + S S+ FL + + +++L T T
Sbjct: 71 LEQTGVDGILLATNTMHKVAKQIIDS--ISVPFLHILDCVANRIKQQNLTKVALLGTAFT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + + + + R+ EE G + + K
Sbjct: 129 MSDNFYRDGLAERGITAIVPEIETQQEIHRIIFEELCVGKILPQS--KAFYLKTIENLTA 186
Query: 190 KRTDVIVLACT 200
+ ++L CT
Sbjct: 187 LGAEGVILGCT 197
>gi|163732216|ref|ZP_02139662.1| hydantoin racemase [Roseobacter litoralis Och 149]
gi|161394514|gb|EDQ18837.1| hydantoin racemase [Roseobacter litoralis Och 149]
Length = 227
Score = 39.2 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 10/133 (7%)
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
L +I VIAC D +R+ S+ LG A AA+ + S++
Sbjct: 57 LLEEIARHPDVDAIVIAC--FDDTGLDAVRTQV-SVPVLGIGEAAYHAASMIANK-FSVI 112
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T + +NL+ ++Q + ++ I ++EE G +I+ EI +
Sbjct: 113 TTLSRSVPGLENNLMKYGLAQKCARVRATDIPVLKLEE---GDPATLYKIRSEIR---VA 166
Query: 187 KEGKRTDVIVLAC 199
E + IVL C
Sbjct: 167 IEQDGAEAIVLGC 179
>gi|161524302|ref|YP_001579314.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
gi|189350942|ref|YP_001946570.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
gi|160341731|gb|ABX14817.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
gi|189334964|dbj|BAG44034.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
Length = 230
Score = 39.2 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 36/134 (26%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT + ++ FL A +++L
Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGAALRDAGVERVALLG 124
Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + L + + R+ I E +
Sbjct: 125 TRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIVARESRAAYVRIIES 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAQRGAQAVILGCT 198
>gi|56790013|dbj|BAD82810.1| monomeric aspartate racemase [Bifidobacterium bifidum]
Length = 241
Score = 39.2 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 23/173 (13%)
Query: 67 LFSDILDK---YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQ 119
+ +D +DK V+ CNTA D +S P + L GAV + +
Sbjct: 65 IIADDIDKATAMGASFIVLTCNTA-HYFYDHFQSLTP-VPILHMPRGAVAHMAGQYPKER 122
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-----IKIKED 174
+ L T + + + L R+ +
Sbjct: 123 FHRVGFLGTMGSRASGVYRQAVEE-AGYTFVE--PDDELQERITSLIYDDVKGTGDLNLQ 179
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226
+ ++ R D ++L CT L V + P + +D + ++
Sbjct: 180 RYESVLQAMLDPAGTCRCDTLMLGCT--EL--SVLNEAFPLPQLPIID-AQAV 227
>gi|42781724|ref|NP_978971.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
gi|42737647|gb|AAS41579.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
Length = 226
Score = 39.2 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 7/145 (4%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115
+K L+ + ++K ++ NT + E + S+ +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMV 111
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
I +L T T+ + + + + +Y + I V I +
Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANYSIETIIPNKEERNFIHHVILNELSKGIISET 170
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195
>gi|332716803|ref|YP_004444269.1| Aspartate racemase [Agrobacterium sp. H13-3]
gi|325063488|gb|ADY67178.1| Aspartate racemase [Agrobacterium sp. H13-3]
Length = 237
Score = 39.2 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 34/121 (28%), Gaps = 3/121 (2%)
Query: 81 VIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
V+ C NT + E + + + A +L+T T+ + ++
Sbjct: 79 VLICTNTM--HLVAETVEKMSGVTLIDIIDETATALKADGRRKPLLLATRYTMEHGFYTD 136
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ + + + + ++ + D ++L C
Sbjct: 137 RMRRHGVDVVVPDEEDRAAIHDIIFGELCQGEIKSCSRERYMSVIEKARALGVDSVILGC 196
Query: 200 T 200
T
Sbjct: 197 T 197
>gi|152971773|ref|YP_001336882.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150956622|gb|ABR78652.1| putative aspartate racemase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 237
Score = 39.2 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 11/142 (7%)
Query: 64 LMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
++ + L + V+ NT A + + FL A +A A
Sbjct: 63 ILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARC------QVPFLHIADATGRAIAAKG 116
Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+++L T T+ +T+ L + + I +++ + + +
Sbjct: 117 QRRVALLGTRYTMEQTFYRGRLQEQFAIETLIPEADDRAQINQIIFDELCLGTFSEASRD 176
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
+ + ++ CT
Sbjct: 177 YYLQTIAALAEQGAEGVIFGCT 198
>gi|289523633|ref|ZP_06440487.1| aspartate racemase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503325|gb|EFD24489.1| aspartate racemase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 250
Score = 39.2 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 38/116 (32%), Gaps = 18/116 (15%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G L + L L S L I CNTA D++ + P + V A
Sbjct: 74 GEDPSPYLLEGLRKLASW-----GADLLAIPCNTA-HYFIDKMEADLP-KPLIHIVEATL 126
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSN---------LIHSYVSQCHIHLVSSMILA 159
+ SG +L+T T++ L+ SQ I + + L
Sbjct: 127 EETKRRTSGGAWLLATSGTIKTELYQKHAPRMGVQLLLPEKSSQEQI--QNCIELV 180
>gi|283786541|ref|YP_003366406.1| Asp/Glu/Hydantoin racemase [Citrobacter rodentium ICC168]
gi|282949995|emb|CBG89623.1| putative Asp/Glu/Hydantoin racemase [Citrobacter rodentium ICC168]
Length = 230
Score = 39.2 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 41/136 (30%), Gaps = 27/136 (19%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160
S+ FL A +A A +++L T T+ + + Q I L
Sbjct: 98 SLPFLHIADATGRAIAARGMKRVALLGTRYTMEQDFYR---GRLAQQFAIES-----LVP 149
Query: 161 RVEEYACGIKIKEDEI---------KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
E+ A +I DE+ ++ + ++ CT
Sbjct: 150 EAEDRATINQIIFDELCLGQFSEASRRYYVDVIERLAAEGAQGVIFGCT-------EIGL 202
Query: 212 LSP---WPVDWLDNSD 224
L P P+ D +
Sbjct: 203 LVPAQSSPIPVFDTAA 218
>gi|217960099|ref|YP_002338657.1| aspartate racemase family protein [Bacillus cereus AH187]
gi|229139289|ref|ZP_04267861.1| Aspartate racemase [Bacillus cereus BDRD-ST26]
gi|217065312|gb|ACJ79562.1| aspartate racemase family protein [Bacillus cereus AH187]
gi|228644145|gb|EEL00405.1| Aspartate racemase [Bacillus cereus BDRD-ST26]
Length = 226
Score = 39.2 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 7/145 (4%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAA 115
+K L+ + ++K ++ NT + E + S+ +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSA-KEMV 111
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
I +L T T+ + + + + +Y + I V I +
Sbjct: 112 EQNI-KRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELSKGIISET 170
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
K+++ + I+L CT
Sbjct: 171 SKEKLLQITKSLIQNGAEGILLGCT 195
>gi|332520393|ref|ZP_08396855.1| aspartate racemase [Lacinutrix algicola 5H-3-7-4]
gi|332043746|gb|EGI79941.1| aspartate racemase [Lacinutrix algicola 5H-3-7-4]
Length = 250
Score = 39.2 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 51/151 (33%), Gaps = 19/151 (12%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + + ++ + I CNTA I + + P L V I++ + +
Sbjct: 67 IAEIIASLIASGS-SIIGIPCNTAHAKPILSLIEKSIPESCVL--VNLIEEVGLHISTKH 123
Query: 123 -----ISILSTPATLRRTYTSNLIHSYVSQCHIHLVS---SMILA-SRVEEYACGIKIKE 173
+ +L T T+ ++ Y + S + + + + GIK
Sbjct: 124 PEITKVGVLGTTGTILAKVYPEVLSKYN--IEVIQPSEDIQDLFVHPSIYDTSYGIKAFS 181
Query: 174 DEIKKEIEGCFIE----KEGKRTDVIVLACT 200
+ + ++ + K ++L CT
Sbjct: 182 NPVNEKAKENLSMAATYLSRKGAQAVILGCT 212
>gi|145629156|ref|ZP_01784955.1| glutamate racemase [Haemophilus influenzae 22.1-21]
gi|144978659|gb|EDJ88382.1| glutamate racemase [Haemophilus influenzae 22.1-21]
Length = 60
Score = 39.2 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 221 DNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
D S +IA+R + LL N + + P+ + ++ + +G +S
Sbjct: 2 DPSAAIAKRIKYLLDDKNLQVQNEKYNQMFCTAHFPEESQFKKALHLWGFES 53
>gi|291326871|ref|ZP_06126146.2| putative aspartate racemase [Providencia rettgeri DSM 1131]
gi|291312313|gb|EFE52766.1| putative aspartate racemase [Providencia rettgeri DSM 1131]
Length = 155
Score = 39.2 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 10/72 (13%)
Query: 72 LDKYQPVLSVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L+ VI CNTA EL+ +K+ T+ I +L+
Sbjct: 89 LENAGAECIVIPCNTAHFWFS-----ELKEVCHVDMLSIVETTMKE-VLVTKKKNIGLLA 142
Query: 128 TPATLRRTYTSN 139
T AT+
Sbjct: 143 TNATMYMGLYQK 154
>gi|228965192|ref|ZP_04126286.1| hypothetical protein bthur0004_20290 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228794426|gb|EEM41938.1| hypothetical protein bthur0004_20290 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 157
Score = 39.2 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K +I NT ++ ++++ + L A +A + +L T T
Sbjct: 71 LQKGGADFIIICTNTMHKVV-GKIKAKI-DIPVLHIADATAKAIKRKDIQKVGLLGTTYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHL 152
+ + + + I + +
Sbjct: 129 MEQDFYKSRIEENNIKVIVPS 149
>gi|237745210|ref|ZP_04575691.1| aspartate racemase [Fusobacterium sp. 7_1]
gi|256026686|ref|ZP_05440520.1| aspartate racemase [Fusobacterium sp. D11]
gi|289764682|ref|ZP_06524060.1| aspartate racemase [Fusobacterium sp. D11]
gi|229432439|gb|EEO42651.1| aspartate racemase [Fusobacterium sp. 7_1]
gi|289716237|gb|EFD80249.1| aspartate racemase [Fusobacterium sp. D11]
Length = 231
Score = 38.8 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K VI NT ++ + + L I +L T T
Sbjct: 71 LEKAGADFIVICTNTMHKVVSGI--KKYTKLPILHIAEMTAIELKKAGIKKIGLLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+++ + ++ + I + + + V + + E K E +
Sbjct: 129 MQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIFNELCLGKIKKESKDEYLRIIRDLSKAG 188
Query: 192 TDVIVLACT 200
++L CT
Sbjct: 189 AKGVILGCT 197
>gi|238788708|ref|ZP_04632500.1| Aspartate racemase [Yersinia frederiksenii ATCC 33641]
gi|238723303|gb|EEQ14951.1| Aspartate racemase [Yersinia frederiksenii ATCC 33641]
Length = 232
Score = 38.8 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + V+ NT + D T + L A I +L T T
Sbjct: 71 LKRAGAEVIVVCTNTMHKVADDI--ETASGLPLLHIADATATQIKRQGISKIGLLGTRYT 128
Query: 132 LRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + + L+ + + + +R+ + I + ++E + E +
Sbjct: 129 MEQDFYRGRLMEKHDIDVITPDSADREIINRIIYEELCLGIISENSRQEYRRIMGKLEQQ 188
Query: 191 RTDVIVLACT 200
I+ CT
Sbjct: 189 GVQGIIFGCT 198
>gi|313139820|ref|ZP_07802013.1| monomeric aspartate racemase [Bifidobacterium bifidum NCIMB 41171]
gi|313132330|gb|EFR49947.1| monomeric aspartate racemase [Bifidobacterium bifidum NCIMB 41171]
Length = 241
Score = 38.8 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 23/173 (13%)
Query: 67 LFSDILDK---YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQ 119
+ +D +DK V+ CNTA D +S P + L GAV + +
Sbjct: 65 IIADDIDKATAMGASFIVLTCNTA-HYFYDHFQSLTP-VPILHMPRGAVAHMAGQYPKER 122
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-----IKIKED 174
+ L T + + + L R+ +
Sbjct: 123 FHRVGFLGTMGSRASGVYRQAVEE-AGYTFVE--PDDELQERITSLIYDDVKGTGDLNLQ 179
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226
+ ++ R D ++L CT L V + P + +D + ++
Sbjct: 180 RYESVLQAMLDPAGTCRCDTLMLGCT--EL--SVLNEAFPLPQLPIID-AQAV 227
>gi|186471587|ref|YP_001862905.1| Asp/Glu/hydantoin racemase [Burkholderia phymatum STM815]
gi|184197896|gb|ACC75859.1| Asp/Glu/hydantoin racemase [Burkholderia phymatum STM815]
Length = 219
Score = 38.8 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 27/179 (15%)
Query: 31 KMRFLMPEYHFI------YVAD--DVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
++ +PE I +AD G+ + R+ S+ + + +
Sbjct: 20 QINEQIPEARVINIIDDSLLADVRTA----GHLTPE-VASRIHSYMSNAQAMH-VDIILN 73
Query: 83 ACNTAFTL--IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
AC ++ D +R F + + A+ + A+ + + +++T +T T L
Sbjct: 74 AC---SSVGEAVDSVR-KFVTTPIVKIDEAMAEEAS-SIGPRVGVVATVSTTLEP-TVRL 127
Query: 141 IHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
I + V+ I E G K DEI K E + DV+VLA
Sbjct: 128 IKRKAGELGRTIEVTERIAEGAFEALLSGDATKHDEIVKNAISALAE----QVDVVVLA 182
>gi|323142707|ref|ZP_08077424.1| aspartate racemase [Succinatimonas hippei YIT 12066]
gi|322417502|gb|EFY08119.1| aspartate racemase [Succinatimonas hippei YIT 12066]
Length = 229
Score = 38.8 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 2/129 (1%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K I NT + +++S ++ L A +++L T T
Sbjct: 71 LEKAGADFIAICTNTMHKVA-PQIQSCI-TIPILHIADATADELIKANIKTVALLGTKYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + I+ + I + + + V I ++ ++E + K
Sbjct: 129 MTQDFYKSRINDKNIKVLIPEEKDIEIVNHVIYDELCRGIISEKSRQEYVRIISSLQQKG 188
Query: 192 TDVIVLACT 200
++L CT
Sbjct: 189 AQGVILGCT 197
>gi|303325617|ref|ZP_07356060.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3]
gi|302863533|gb|EFL86464.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3]
Length = 230
Score = 38.8 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 52/148 (35%), Gaps = 5/148 (3%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+W+ AL L+ + L+K VI NT + +++ S+ L
Sbjct: 55 GDWDRSAL---LLGAAAQNLEKGGADFIVICTNTMHKVA-HRIQAAV-SIPLLHIADVTA 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+ +L T T+ + + + I + ++V + +
Sbjct: 110 AEILGRGLRSVGLLGTRYTMEEDFYCGRLRRQGLEVLIPDAPERDMINKVIFEELCLGVI 169
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACT 200
++ +K+ + G+ ++L CT
Sbjct: 170 REDSRKKFQAAMAGLAGRGARGVILGCT 197
>gi|301128206|ref|XP_002999330.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111417|gb|EEY69469.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 269
Score = 38.8 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 6/93 (6%)
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIH-SYVSQCHIH-LVSSMILASRVEEYACGIKI 171
A + ++ST T +L+ + ++ V L + G+K
Sbjct: 171 ANKLPSCKRVGLMSTTGTRNSRVYHDLMEPRGYTVVEVYAGVMQQELHESIYIREWGVKS 230
Query: 172 KEDEI----KKEIEGCFIEKEGKRTDVIVLACT 200
+ + + + +VI+L CT
Sbjct: 231 TAPSVSSRSEANFHRYALHLREQGAEVIILGCT 263
>gi|224282662|ref|ZP_03645984.1| aspartate racemase [Bifidobacterium bifidum NCIMB 41171]
gi|311063986|ref|YP_003970711.1| aspartate racemase [Bifidobacterium bifidum PRL2010]
gi|310866305|gb|ADP35674.1| Aspartate racemase [Bifidobacterium bifidum PRL2010]
Length = 230
Score = 38.8 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 23/173 (13%)
Query: 67 LFSDILDK---YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQ 119
+ +D +DK V+ CNTA D +S P + L GAV + +
Sbjct: 54 IIADDIDKATAMGASFIVLTCNTA-HYFYDHFQSLTP-VPILHMPRGAVAHMAGQYPKER 111
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-----IKIKED 174
+ L T + + + L R+ +
Sbjct: 112 FHRVGFLGTMGSRASGVYRQAVEE-AGYTFVE--PDDELQERITSLIYDDVKGTGDLNLQ 168
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226
+ ++ R D ++L CT L V + P + +D + ++
Sbjct: 169 RYESVLQAMLDPAGTCRCDTLMLGCT--EL--SVLNEAFPLPQLPIID-AQAV 216
>gi|260432707|ref|ZP_05786678.1| Asp/Glu/Hydantoin racemase family protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416535|gb|EEX09794.1| Asp/Glu/Hydantoin racemase family protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 246
Score = 38.8 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 17/174 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ +IA NT +R +M L A A T + +L T T
Sbjct: 81 LEQAGCDFGIIASNTP-HARLHAIRQGV-TMPILSIFDATAVATKTTGAKSALVLGTSVT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSS--MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
++ + + + + + L + + ++ G + + +
Sbjct: 139 MQARHYAERLAAEGITANDRLPEDQIAEMQAMIDTEFYGG--ASAKARGRLLAFCNRHAA 196
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDS-IARRARCLLPR 236
T I+LACT PL F Q PV +++ S + +A + L
Sbjct: 197 PGT-AILLACTELPL---AFPQHLDDPVFETDGHLFVNPSAAHVAAALKEALSE 246
>gi|52142858|ref|YP_083972.1| aspartate racemase [Bacillus cereus E33L]
gi|51976327|gb|AAU17877.1| aspartate racemase [Bacillus cereus E33L]
Length = 226
Score = 38.8 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT + E + S+ L +
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSAKEMVE 112
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + + +Y + I V I + K
Sbjct: 113 QDIKRIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELSKGIISETSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195
>gi|30020750|ref|NP_832381.1| aspartate racemase [Bacillus cereus ATCC 14579]
gi|229130822|ref|ZP_04259771.1| Aspartate racemase [Bacillus cereus BDRD-Cer4]
gi|29896302|gb|AAP09582.1| Aspartate racemase [Bacillus cereus ATCC 14579]
gi|228652627|gb|EEL08516.1| Aspartate racemase [Bacillus cereus BDRD-Cer4]
Length = 226
Score = 38.8 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 48/143 (33%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKKMVEQN 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ I +L T T+ + + + + Y + I V I + K
Sbjct: 115 IK--RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISETSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+ + + I+L CT
Sbjct: 173 ERLLQITKSLIQNGAEGILLGCT 195
>gi|294648484|ref|ZP_06725962.1| hydantoin racemase [Acinetobacter haemolyticus ATCC 19194]
gi|292825625|gb|EFF84350.1| hydantoin racemase [Acinetobacter haemolyticus ATCC 19194]
Length = 232
Score = 38.8 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 48/149 (32%), Gaps = 22/149 (14%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
D A+ + Q +IAC D R +G A A
Sbjct: 49 DEAIASFHLLELIKQGQSQQVDGHIIAC--FGDPGLDAARE-LTDAPVIGIAEAAFHMAT 105
Query: 117 YTQSGLISILSTP----ATLRRTYT--SNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+++T TL+RT +L+H Y + + L K
Sbjct: 106 --------LIATKFSIVTTLKRTKIIAEHLLHQYGYIHKCEKIHCIDLPVL-----DLEK 152
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+++ K +E C++ KE IVL C
Sbjct: 153 NEKETYDKLLETCWLAKENDGVGAIVLGC 181
>gi|226938988|ref|YP_002794059.1| Aspartate racemase [Laribacter hongkongensis HLHK9]
gi|226713912|gb|ACO73050.1| Aspartate racemase [Laribacter hongkongensis HLHK9]
Length = 229
Score = 38.4 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
L+ L+ V+ NT + +++ + FL A A +
Sbjct: 63 LLARACRQLEAAGADAVVLCTNTMHKVA-PAMQAA-TDLPFLHIGDATAAAIRAAGLDCV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ + + + + + + R+ + +
Sbjct: 121 GLLGTRFTMEQDFYRARLEARGIRVLVPEADDRATVHRIIYDELCLGDIRPASRTAYLDI 180
Query: 184 FIEKEGKRTDVIVLACT 200
+VL CT
Sbjct: 181 IGRLAAAGAQGVVLGCT 197
>gi|330828408|ref|YP_004391360.1| amino acid recemase [Aeromonas veronii B565]
gi|328803544|gb|AEB48743.1| Amino acid recemase, putative [Aeromonas veronii B565]
Length = 232
Score = 38.4 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 43/174 (24%), Gaps = 16/174 (9%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+W RL+ + L +I NT + + + L A
Sbjct: 55 GDWPA---TARLLAAEARKLQAGGADFLLIGTNTMHKVAPEI--EAAIDIPLLHIADATA 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ +L T T+ + + L + + + R+ +
Sbjct: 110 AKLRADGITRVGLLGTRFTMEQDFYKGRLQERFGLAVLVPDEAGRERVHRIIYDELCLGE 169
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDN 222
+ E + ++L CT L V D
Sbjct: 170 IRASSRAEYLAIIEGLAAAGAEAVILGCT-------EIALLVGDARAAVPLYDT 216
>gi|310287122|ref|YP_003938380.1| aspartate racemase [Bifidobacterium bifidum S17]
gi|309251058|gb|ADO52806.1| aspartate racemase [Bifidobacterium bifidum S17]
Length = 241
Score = 38.4 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 23/173 (13%)
Query: 67 LFSDILDK---YQPVLSVIACNTAFTLIKDELRSTFPSMAFL----GAVPAIKQAAAYTQ 119
+ +D +DK V+ CNTA D +S P + L GAV + +
Sbjct: 65 IIADDIDKATAMGASFIVLTCNTA-HYFYDHFQSLTP-VPILHMPRGAVAHMAGQYPKER 122
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-----IKIKED 174
+ L T + + + L R+ +
Sbjct: 123 FHRVGFLGTMGSRASGVYRQAVEE-AGYTFVE--PDDELQERITSLIYDDVKGTGDLNLQ 179
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI 226
+ ++ R D ++L CT L V + P + +D + ++
Sbjct: 180 RYESVLQSMLDPAGTCRCDTLMLGCT--EL--SVLNEAFPLPQLPIID-AQAV 227
>gi|110678210|ref|YP_681217.1| hydantoin racemase [Roseobacter denitrificans OCh 114]
gi|109454326|gb|ABG30531.1| hydantoin racemase [Roseobacter denitrificans OCh 114]
Length = 227
Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
L +++ V+AC D +R T + LG A AA+ + S++
Sbjct: 57 LLAEVALHKDVDAIVVAC--FDDTGVDAVR-TLVDVPVLGIGEAAYHAASMIANK-FSVI 112
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-EDEIKKEIEGCFI 185
+T + +NL+ ++Q + ++ I ++EE K + EI++ I
Sbjct: 113 TTLSRSVPGLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIKSEIREAIAA--- 169
Query: 186 EKEGKRTDVIVLAC 199
+ IVL C
Sbjct: 170 ----DNAEAIVLGC 179
>gi|90408560|ref|ZP_01216716.1| hypothetical protein PCNPT3_05976 [Psychromonas sp. CNPT3]
gi|90310314|gb|EAS38443.1| hypothetical protein PCNPT3_05976 [Psychromonas sp. CNPT3]
Length = 229
Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 14/140 (10%), Positives = 37/140 (26%), Gaps = 3/140 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + + +I NT + + L A
Sbjct: 61 AKILIEGAKSVQAAGADFLLICTNTMHKVAPQI--EAAIDIPLLHIADATADVLVKKGIK 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L T T+ + + + + + + + V + K E
Sbjct: 119 KVGLLGTAFTMEQDFYKGRLQNNSGLTVIVPDEADRKIVHNVIYKELCLGKAMPASKIEY 178
Query: 181 EGCFIEKEGKRTDVIVLACT 200
+ + ++L CT
Sbjct: 179 LRIIESLAAQGAEAVILGCT 198
>gi|324326620|gb|ADY21880.1| putative racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 226
Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 42/142 (29%), Gaps = 2/142 (1%)
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
K + + ++K ++ NT + E S+ L +
Sbjct: 56 EEVKNALVTVAKKVEKSGAECLLMCSNT--VHLFAEEVENAISIPLLHIGDVSAKEMVDQ 113
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
I +L T T+ + + + + Y + I V I + K+
Sbjct: 114 NIKRIGLLGTKQTMEQDFYKSRLAHYNIETIIPNEEERNFIHHVILNELSKGIISETSKE 173
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
++ + I+L CT
Sbjct: 174 KLLQITKSLIQNGAEGILLGCT 195
>gi|332304391|ref|YP_004432242.1| aspartate racemase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332171720|gb|AEE20974.1| aspartate racemase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 230
Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K +I NT + E+ ++ S+ L + + +L T T
Sbjct: 71 LEKAGADFLLICTNTMHKVA-PEITASI-SVPVLHIADTTAEVLQQENISRVGLLGTAFT 128
Query: 132 LRRT-YTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ ++ YTS L + + + + + + + C KIK++ KK +
Sbjct: 129 MEQSFYTSRLTNKFGIEVITPNADDRAVVHNIIYQELCKGKIKDESRKKYL-NIISALAA 187
Query: 190 KRTDVIVLACT 200
++L CT
Sbjct: 188 DGCQGVILGCT 198
>gi|319443219|ref|ZP_07992375.1| aspartate racemase [Corynebacterium variabile DSM 44702]
Length = 241
Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 11/118 (9%)
Query: 90 LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCH 149
++ D L P + + AV A++ A +G + +L T T+ T+ +
Sbjct: 88 IVFDRLVEASP-VPLVSAVDAVRDEAVARGTGKVLLLGTGFTM-SPETNGFFTRPFTDAG 145
Query: 150 IHLVSSMILASRVEEYACGI--KIKEDEIKKEIEGCFIEK-----EGKRTDVIVLACT 200
+ +V + A+ +EE I +++ + E F+ + D +VL CT
Sbjct: 146 VEVV--LPDAAEIEEVQHRIATELELGVVTDETRDRFVGIIDRVHRAEGVDQVVLGCT 201
>gi|222082429|ref|YP_002541794.1| hydantoin racemase protein [Agrobacterium radiobacter K84]
gi|221727108|gb|ACM30197.1| hydantoin racemase protein [Agrobacterium radiobacter K84]
Length = 243
Score = 38.4 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 33/153 (21%)
Query: 92 KDELRSTFPSMAFLG-----AVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
+ R+ F + LG V A A +T + T R NL+ Y
Sbjct: 82 LEAARA-FSDVPVLGLCESAVVTAGFLAQRFT-------IVTTLERSRVLIDNLVRHYGM 133
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC------T 200
+ +S I +E+ A +++ EIE + + IVL C T
Sbjct: 134 GGRAKVRASDIAVLELEDGA---PEAIGKLRAEIERAL---DEDGAEAIVLGCAGMADLT 187
Query: 201 HYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+++ V +D + ++A L
Sbjct: 188 ------RELQEIYG--VPVIDGVAAAVKQAEAL 212
>gi|227530282|ref|ZP_03960331.1| aspartate racemase [Lactobacillus vaginalis ATCC 49540]
gi|227349805|gb|EEJ40096.1| aspartate racemase [Lactobacillus vaginalis ATCC 49540]
Length = 224
Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 51/144 (35%), Gaps = 4/144 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+ + +++L ++ NT L+ D++++ ++ L V AA
Sbjct: 44 EKIAGYVGAAANNLLKAG-CDFGLMCGNTP-HLLFDKIQAR-TDLSLLSIVETAVAAAQQ 100
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+++L T T++ + C I+ ++ + +K++
Sbjct: 101 LHLQRLALLGTKFTMQNDFFIKPFREAGIEVCRPSENDQPIIHQKIVDKLENGIVKKETK 160
Query: 177 KKEIEGCFIEKEGKRTDVIVLACT 200
++ + + D VL CT
Sbjct: 161 QQLMTIINKMVQKDHLDGAVLGCT 184
>gi|254508322|ref|ZP_05120444.1| aspartate racemase [Vibrio parahaemolyticus 16]
gi|219548736|gb|EED25739.1| aspartate racemase [Vibrio parahaemolyticus 16]
Length = 232
Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 44/149 (29%), Gaps = 6/149 (4%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G W+ A+ ++ + L+K +IA NT L S+ L A
Sbjct: 55 GAWDSAAV---VLCKAAQSLEKAGADFILIATNTMHKLAGQI--EESISIPLLHIADATG 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ +L T T+ + I + + + + L V
Sbjct: 110 HELTRRGISKVGLLGTAFTMEEDFYKQRITNKFGIEVIVPNGVQRKLVHDVIYDELCQGK 169
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
K + + E ++L CT
Sbjct: 170 LNRRSKHDYQTIIEELAMNGAQGVILGCT 198
>gi|221198449|ref|ZP_03571495.1| aspartate racemase [Burkholderia multivorans CGD2M]
gi|221208602|ref|ZP_03581603.1| aspartate racemase [Burkholderia multivorans CGD2]
gi|221171593|gb|EEE04039.1| aspartate racemase [Burkholderia multivorans CGD2]
gi|221182381|gb|EEE14782.1| aspartate racemase [Burkholderia multivorans CGD2M]
Length = 230
Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 36/134 (26%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT + ++ FL A +++L
Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGAALRDAGVERVALLG 124
Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + L + + R+ I E +
Sbjct: 125 TRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIVARESRGTYVRIIES 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAQRGAQAVILGCT 198
>gi|197120977|ref|YP_002132928.1| aspartate racemase [Anaeromyxobacter sp. K]
gi|196170826|gb|ACG71799.1| aspartate racemase [Anaeromyxobacter sp. K]
Length = 234
Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 9/132 (6%)
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151
LR P + V A + ++ ++ T T+ + + + + + +
Sbjct: 91 LPALRPRSP-LPIADLVGATCEDVRAAGHRVVGLVGTRFTVSEPFFRDALEAAGVRVVVP 149
Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT-DVIVLACTHYPLIVHVFR 210
+ + K ++ E+ + D +V+ACT
Sbjct: 150 DEAGTDDLDALIFGPLARGEKTPAMQGELAAIVSRMARREPLDALVVACT-------DLM 202
Query: 211 QLSPWPVDWLDN 222
L V LD
Sbjct: 203 DLMGTEVPLLDP 214
>gi|291008730|ref|ZP_06566703.1| putative aspartate/glutamate racemase [Saccharopolyspora erythraea
NRRL 2338]
Length = 231
Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 2/133 (1%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++ L V+ NT + D++ + + L A ++ +L
Sbjct: 67 AAKQIETAGADLLVLCTNTMHKVA-DQIEAAI-EIPLLHLADTTATAVTAAGLQVVGLLG 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + + + + + + L V I + +
Sbjct: 125 TAFTMEQDFYRDRLSGHRLTVLVPEREDRALVHSVIYDELCRGIVSETSRAAYRRVIDRL 184
Query: 188 EGKRTDVIVLACT 200
+VL CT
Sbjct: 185 VAAGAQGVVLGCT 197
>gi|254247766|ref|ZP_04941087.1| Aspartate racemase [Burkholderia cenocepacia PC184]
gi|124872542|gb|EAY64258.1| Aspartate racemase [Burkholderia cenocepacia PC184]
Length = 230
Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT + ++ FL A +++L
Sbjct: 67 AARQLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGSALRAAGVERVALLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + L + + R+ + +E +
Sbjct: 125 TRYTMELPFYAARLREKFGLDVLVPDERGRDDVHRIIYDELCHGVISEESRSTYVSIIDG 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAQRGAQAVILGCT 198
>gi|229161526|ref|ZP_04289506.1| Aspartate racemase [Bacillus cereus R309803]
gi|228621771|gb|EEK78617.1| Aspartate racemase [Bacillus cereus R309803]
Length = 226
Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT + E + S+ L +
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNT--VHLFAEEVESAISIPLLHIGDVSAKEMVE 112
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + ++ + +Y + I V I + K
Sbjct: 113 QDIKRIGLLGTKQTMEQDFYTSRLANYNIETIIPNKEERNFIHHVILNELSKGIISEASK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195
>gi|228921319|ref|ZP_04084644.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228838333|gb|EEM83649.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 226
Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + + Y + I V I + K
Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISETSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195
>gi|297184446|gb|ADI20561.1| hypothetical protein [uncultured alpha proteobacterium
EB080_L84F03]
Length = 227
Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 10/123 (8%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
VIAC D +R T ++ LG A AA+ + S+++T +
Sbjct: 67 VDAIVIAC--FDDTGVDAVR-TLVNIPVLGIGEAAYHAASMIANK-FSVITTLSRSVPGL 122
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+NL+ ++Q + ++ I ++EE K +K EI + T+ IV
Sbjct: 123 ENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFK---VKSEIRESIAQ---DNTEAIV 176
Query: 197 LAC 199
L C
Sbjct: 177 LGC 179
>gi|223039044|ref|ZP_03609335.1| aspartate racemase subfamily [Campylobacter rectus RM3267]
gi|222879683|gb|EEF14773.1| aspartate racemase subfamily [Campylobacter rectus RM3267]
Length = 229
Score = 38.4 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 2/132 (1%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ IL I NT D ++S S+ + A + + + +L T
Sbjct: 68 ARILQGGGCDFIFICTNTM-HKCFDAVQSAV-SVPVVHIAQATLKRLLASGVQRVGLLGT 125
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ ++ + I M + + V + + K++ +
Sbjct: 126 IYTMKESFYKETLQKGGVNVLIPNAEDMRMINDVIFKELCLGKISPDSKRDFLRVIDKMA 185
Query: 189 GKRTDVIVLACT 200
+L CT
Sbjct: 186 DAGAQGAILGCT 197
>gi|228939755|ref|ZP_04102335.1| Aspartate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228972637|ref|ZP_04133239.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228979226|ref|ZP_04139567.1| Aspartate racemase [Bacillus thuringiensis Bt407]
gi|228780502|gb|EEM28728.1| Aspartate racemase [Bacillus thuringiensis Bt407]
gi|228787078|gb|EEM35055.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228819914|gb|EEM65959.1| Aspartate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326940403|gb|AEA16299.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
Length = 226
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + + Y + I V I + K
Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISETSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195
>gi|86151206|ref|ZP_01069421.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
260.94]
gi|315123688|ref|YP_004065692.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841553|gb|EAQ58800.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017410|gb|ADT65503.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 230
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 13/145 (8%)
Query: 65 MFLFSDILDKYQPVLSVIACN----TAFTL--IKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ IL + L + N T T+ + DE++ ++ L V + +A
Sbjct: 57 WQEAAQILTQCAKKLELAGANFIIITTNTMHKVFDEIQQNI-NIPILHIVKSSAKALKQE 115
Query: 119 QSGLISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + LI +S I+ + C KIK+D +
Sbjct: 116 NIQKIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDIIFNELCKGKIKQDSKE 175
Query: 178 KE--IEGCFIEKEGKRTDVIVLACT 200
K I EK K +LACT
Sbjct: 176 KYLNIINKLQEKGAKGA---LLACT 197
>gi|107028677|ref|YP_625772.1| aspartate racemase [Burkholderia cenocepacia AU 1054]
gi|116690164|ref|YP_835787.1| aspartate racemase [Burkholderia cenocepacia HI2424]
gi|105897841|gb|ABF80799.1| Aspartate racemase [Burkholderia cenocepacia AU 1054]
gi|116648253|gb|ABK08894.1| aspartate racemase [Burkholderia cenocepacia HI2424]
Length = 230
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT + ++ FL A +++L
Sbjct: 67 AARRLEAAGADLVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGSALRAAGVERVALLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + L + + R+ + +E +
Sbjct: 125 TRYTMELPFYAARLREKFGLDVLVPDERGRDDVHRIIYDELCHGVISEESRATYVSIIDG 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAQRGAQAVILGCT 198
>gi|134099495|ref|YP_001105156.1| putative aspartate/glutamate racemase [Saccharopolyspora erythraea
NRRL 2338]
gi|133912118|emb|CAM02231.1| putative aspartate/glutamate racemase [Saccharopolyspora erythraea
NRRL 2338]
Length = 222
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 2/133 (1%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++ L V+ NT + D++ + + L A ++ +L
Sbjct: 58 AAKQIETAGADLLVLCTNTMHKVA-DQIEAAI-EIPLLHLADTTATAVTAAGLQVVGLLG 115
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + + + + + + L V I + +
Sbjct: 116 TAFTMEQDFYRDRLSGHRLTVLVPEREDRALVHSVIYDELCRGIVSETSRAAYRRVIDRL 175
Query: 188 EGKRTDVIVLACT 200
+VL CT
Sbjct: 176 VAAGAQGVVLGCT 188
>gi|170693200|ref|ZP_02884360.1| Asp/Glu/hydantoin racemase [Burkholderia graminis C4D1M]
gi|170141730|gb|EDT09898.1| Asp/Glu/hydantoin racemase [Burkholderia graminis C4D1M]
Length = 218
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 51/150 (34%), Gaps = 17/150 (11%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTL--IKDELRSTFPSMAFLGAVPA 110
G+ ++ ++ + + + + AC ++ D LR +
Sbjct: 46 GHLTPEVTRRLYSYMANA--EALGADIILNAC---SSVGEATDLLRGMIRTPIVKVDEAM 100
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACG 168
+A A + +++T +T T LI I + + + E G
Sbjct: 101 ADEACAL--GPRVGVVATVSTTLEP-TVRLIRRKAVERGVEIEVTECIAQGAF-EALLAG 156
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
K D+I K I + + DVIVLA
Sbjct: 157 DAAKHDDILKRA----IIELAGQVDVIVLA 182
>gi|206972488|ref|ZP_03233433.1| aspartate racemase family protein [Bacillus cereus AH1134]
gi|229178917|ref|ZP_04306276.1| Aspartate racemase [Bacillus cereus 172560W]
gi|206732648|gb|EDZ49825.1| aspartate racemase family protein [Bacillus cereus AH1134]
gi|228604570|gb|EEK62032.1| Aspartate racemase [Bacillus cereus 172560W]
Length = 226
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + + Y + I V I + K
Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISETSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195
>gi|297844444|ref|XP_002890103.1| aspartate-glutamate racemase family [Arabidopsis lyrata subsp.
lyrata]
gi|297335945|gb|EFH66362.1| aspartate-glutamate racemase family [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEE-YACGIKIKEDEIKK 178
+ +++T ATL + + S + + ++M + +E ++ + ++
Sbjct: 217 RVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKREDMEGARNLLRI 276
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230
++ ++ V++L R L P +D D++AR A
Sbjct: 277 ALQVLLVQAVN----VVMLG-------SDEMRDLLPGDDPLLKKCVDPMDALARSA 321
>gi|239616913|ref|YP_002940235.1| aspartate racemase [Kosmotoga olearia TBF 19.5.1]
gi|239505744|gb|ACR79231.1| aspartate racemase [Kosmotoga olearia TBF 19.5.1]
Length = 230
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 45/148 (30%), Gaps = 10/148 (6%)
Query: 85 NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144
NT D + P + +L + A + IL T + + +
Sbjct: 85 NTI-HHAFDLVVEKSP-IPWLHIAEEVAAEAKRKNYKCLGILGTRFLMESPVYPAKLDAA 142
Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204
I + + + E + + + + D +VL CT PL
Sbjct: 143 GIGYRIPETKNRERINEIIFNELVYGRFYPESRAYFNEVIGKLKDQGCDAVVLGCTEIPL 202
Query: 205 IVHVFRQLSPWPVDW--LDNSDSIARRA 230
+ + P LD++ +AR A
Sbjct: 203 L------VIPEESPLPTLDSTRILARAA 224
>gi|311278211|ref|YP_003940442.1| aspartate racemase [Enterobacter cloacae SCF1]
gi|308747406|gb|ADO47158.1| aspartate racemase [Enterobacter cloacae SCF1]
Length = 230
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 55/167 (32%), Gaps = 15/167 (8%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+++ + L++ V+ NT + + + + FL A +A A
Sbjct: 62 QILAEAAAGLERIGAEGIVLCTNTMHKVAQQI--ESRCRVPFLHIADATGRAIARQGIRN 119
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS--MILASRVEEYACGIKIKEDEIKKEI 180
+++L T T+ + + + S + + L + + C + E + +
Sbjct: 120 VALLGTRYTMEQDFYRGRLERQFSLTTLIPEADDRAKLNQIIFDELCQGQFSEASRRDYL 179
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSD 224
+ + + ++ CT L P PV D +
Sbjct: 180 QAI-DRLVAQGAEGVIFGCT-------EIGLLVPAERCPVPVFDTAA 218
>gi|229190733|ref|ZP_04317728.1| Aspartate racemase [Bacillus cereus ATCC 10876]
gi|228592758|gb|EEK50582.1| Aspartate racemase [Bacillus cereus ATCC 10876]
Length = 226
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + + Y + I V I + K
Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISETSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195
>gi|254251950|ref|ZP_04945268.1| Aspartate racemase [Burkholderia dolosa AUO158]
gi|124894559|gb|EAY68439.1| Aspartate racemase [Burkholderia dolosa AUO158]
Length = 230
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 37/134 (27%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT + ++ FL A G +++L
Sbjct: 67 AARRLEAAGAELVVLTTNTM--HRVHDAIEAAVTLPFLHIADPTGAALRDAGIGRVALLG 124
Query: 128 TPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + L + R+ I E E +
Sbjct: 125 TRYTMELPFYAQRLRDKFDIDVLTPDERQRDDVHRIIYDELCHGIVEAESRATYVRIIES 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LAQRGAQAVILGCT 198
>gi|110678174|ref|YP_681181.1| aspartate racemase [Roseobacter denitrificans OCh 114]
gi|109454290|gb|ABG30495.1| aspartate racemase, probable [Roseobacter denitrificans OCh 114]
Length = 237
Score = 38.0 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 17/148 (11%)
Query: 81 VIA--CNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILSTPATLRR 134
V+A CNTA T I+D + + +M L A QAA + G++ IL++PAT
Sbjct: 81 VLAMPCNTAHLYATQIEDAVGISLLNMPKL----ACAQAAQGMKRGGIVGILASPATNSS 136
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
N + + Q ILAS G + + + + + +R
Sbjct: 137 GLFGNFLARHEVQSAFPENEDGILASIRRIKKSGPTQTDITLLEREAASLVRRGAER--- 193
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+++ C+ + L+ R PV LD
Sbjct: 194 VIIGCSEFSLVSERIR----CPVPILDT 217
>gi|225572754|ref|ZP_03781509.1| hypothetical protein RUMHYD_00944 [Blautia hydrogenotrophica DSM
10507]
gi|225039893|gb|EEG50139.1| hypothetical protein RUMHYD_00944 [Blautia hydrogenotrophica DSM
10507]
Length = 143
Score = 38.0 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 2/90 (2%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+H + R + L++ ++ NT ++++ S+ L A+ +
Sbjct: 53 ERGEHEILCRKLTEVCQSLERAGADCVLLCTNTMHAFA-EQIQECL-SVPLLHIADAVGE 110
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHS 143
I ++ TP T+ + N +
Sbjct: 111 EIQEKGLDTIGLMGTPFTMEMPFYKNRLEE 140
>gi|260654210|ref|ZP_05859700.1| Na/Pi-cotransporter family protein [Jonquetella anthropi E3_33 E1]
gi|260630843|gb|EEX49037.1| Na/Pi-cotransporter family protein [Jonquetella anthropi E3_33 E1]
Length = 543
Score = 38.0 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 50/159 (31%), Gaps = 29/159 (18%)
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++L++ A R + L H + +V + E I + I ++I
Sbjct: 223 AVLASLAASREAKQAALGHVLNKLIGVLIV--LPFLPAAEHL---IGLTSHSIGRQIANA 277
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHV---FRQLSPWPVDWL--------------DNSDSI 226
++L +P I + +++ P + + ++
Sbjct: 278 HTLFNLAN--TVIL----FPFITPLTRFIQKVLPAEPRLVYSGPQFLDNRLLESSPAAAV 331
Query: 227 ARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQ 265
A + L R+ + DD L + A R+ Q
Sbjct: 332 A-ATKQELLRMGRFALSMLDDSRSALLERQKDAAERVAQ 369
>gi|300770584|ref|ZP_07080463.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33861]
gi|300763060|gb|EFK59877.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33861]
Length = 247
Score = 38.0 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 60/183 (32%), Gaps = 20/183 (10%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTL-----IKDELRSTFPSMAFL-GAVPAIKQAA 115
+ L++ + I C+TA + I+ EL+ + L A
Sbjct: 60 AYAIAEIISELEQSGATVVGIPCHTAHAVPIFDIIRYELQKKEHKVRLLHMVEETSDYIA 119
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--- 172
A+ + ++ IL+T +++ + +++ +
Sbjct: 120 AHFTAPVVGILTTTGIRNTGLYNHVFA--AKGLKVI-QPPEEWQEKIQAAIHDEQYGIKA 176
Query: 173 -----EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ K+E+ E + + VI+L CT + R+ + +D + +A
Sbjct: 177 SSSPVTNRAKEELVAAIHELKKEGATVIILGCT---ELSGALREKEISGLPLVDPNRILA 233
Query: 228 RRA 230
R
Sbjct: 234 RAL 236
>gi|260906284|ref|ZP_05914606.1| aspartate racemase [Brevibacterium linens BL2]
Length = 230
Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 47/140 (33%), Gaps = 11/140 (7%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160
+ + V +I A +++L T T+ + + + S + + + I
Sbjct: 98 DVPLIHIVDSIATVAKSQGYSTLAVLGTKWTMLDDFYTGRLESQGIRTLVPDEDTCIEVD 157
Query: 161 RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD-- 218
++ + DE + + + + D + L+CT L P
Sbjct: 158 QIIFDELTQGVFTDESRARYAEIMNDLKARGADAVALSCT-------EIGLLVPPETAPL 210
Query: 219 -WLDNSDS-IARRARCLLPR 236
+D+ D+ +A ++
Sbjct: 211 PAIDSVDAHVAAIVEWMIAE 230
>gi|294787311|ref|ZP_06752564.1| aspartate racemase [Parascardovia denticolens F0305]
gi|315227130|ref|ZP_07868917.1| aspartate racemase [Parascardovia denticolens DSM 10105]
gi|294484667|gb|EFG32302.1| aspartate racemase [Parascardovia denticolens F0305]
gi|315119580|gb|EFT82713.1| aspartate racemase [Parascardovia denticolens DSM 10105]
Length = 241
Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 56/174 (32%), Gaps = 26/174 (14%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATL 132
V+ CNTA D ++ P F A+ + ++ + + ++T +
Sbjct: 77 GASFIVLTCNTA-HYFYDRFQALTPVPIFHMPRRAVSRMSSLYPAARCPRVGFMATEGSR 135
Query: 133 RRTYTSNLIHSYV-----SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
+ I + + + ++ V K+ E ++
Sbjct: 136 KAGVYQKEIEAAGYTYVEPDEDLQRQINALIYQDV---KGSGKLDEGRYLAAMQAFLNPH 192
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSI--------ARRARC 232
R DV++L CT L V + P + +D + ++ AR R
Sbjct: 193 GPYRCDVVLLGCT--EL--SVLNEAFPQPDLPLID-AQAVLVEDTVAAARALRR 241
>gi|229103249|ref|ZP_04233932.1| Aspartate racemase [Bacillus cereus Rock3-28]
gi|228680088|gb|EEL34282.1| Aspartate racemase [Bacillus cereus Rock3-28]
Length = 227
Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 50/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 57 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEIVEQ 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + ++ + Y + I V I + +
Sbjct: 115 NI-KRIGLLGTKQTMEQDFYTSRLAKYNIETLIPNDEERTFIHHVILNELSRGIISETSR 173
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 174 EKLIQITNSLIQNGAEGILLGCT 196
>gi|78042937|ref|YP_360172.1| hydantoin racemase [Carboxydothermus hydrogenoformans Z-2901]
gi|77995052|gb|ABB13951.1| hydantoin racemase [Carboxydothermus hydrogenoformans Z-2901]
Length = 242
Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 71/227 (31%), Gaps = 50/227 (22%)
Query: 31 KMRFLMPEYHFIYVA-----DDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVL------ 79
++R YV D YG + M + DIL+K +
Sbjct: 17 EIREEFKH----YVGPHDSFDVENLDYGPASIESEFDEAMAI-PDILNKVKKAQEDGFDG 71
Query: 80 SVIAC------NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATL 132
+I C N A R G PA++ A ++ G++++L P +
Sbjct: 72 VIIDCFGDPGVNAA--------RELVDIPVCGGFEPAMQIALGLGKNIGIVTVL--PNVV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+LI + + + + K ED + +
Sbjct: 122 S--MLQDLIAKMGIEKRVKSI---RYVNIPVLDLGDKKKLEDALFN---QSLEAIKNDHV 173
Query: 193 DVIVLACT------HYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
V+VL CT H L+ + + + + V +D + S A +
Sbjct: 174 QVVVLGCTGMMGMAH-NLMKRL--KEAGYDVPVVDPAFSAAMMVKNY 217
>gi|87122402|ref|ZP_01078283.1| hypothetical protein MED121_00595 [Marinomonas sp. MED121]
gi|86162377|gb|EAQ63661.1| hypothetical protein MED121_00595 [Marinomonas sp. MED121]
Length = 230
Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 18/149 (12%), Positives = 55/149 (36%), Gaps = 6/149 (4%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+W+ +++ + L+K +I NT + +++++ ++ L A
Sbjct: 55 GDWDKA---AKILTNAAKSLEKAGVDFILIGTNTMHKVA-NQIKANI-NVPLLHIAHATG 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + +++L T T+ + + + + ++ + + + + +
Sbjct: 110 ERLIADKIEKVALLGTAFTMEQAFYKDTLSKAFGLEVLVPQAGDAQIIHNIIYQELCLGK 169
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+E KK + ++L CT
Sbjct: 170 CLEESKKAYLDIISRLVEEGAQGVILGCT 198
>gi|238751301|ref|ZP_04612795.1| Aspartate racemase [Yersinia rohdei ATCC 43380]
gi|238710575|gb|EEQ02799.1| Aspartate racemase [Yersinia rohdei ATCC 43380]
Length = 233
Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 13/135 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + V+ NT + D + L A I +L T T
Sbjct: 71 LKRAGAEVIVVCTNTMHKVADDI--EAACGLPLLHIADATAAQIKQQGINKIGLLGTRYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV------EEYACGIKIKEDEIKKEIEGCFI 185
+ + + Q I +++ + + EE GI + ++E
Sbjct: 129 MEQDFYRG---RLAEQHDIEVITPDSIDREIINRIIYEELCLGIITETS--RQEYRRIIG 183
Query: 186 EKEGKRTDVIVLACT 200
+ E + I+ CT
Sbjct: 184 KLEQQGVQGIIFGCT 198
>gi|229075088|ref|ZP_04208089.1| Aspartate racemase [Bacillus cereus Rock4-18]
gi|228708019|gb|EEL60191.1| Aspartate racemase [Bacillus cereus Rock4-18]
Length = 227
Score = 38.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 50/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 57 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I ++ T T+ + + ++ + Y + I V I + +
Sbjct: 115 NI-KRIGLIGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGIISETSR 173
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 174 EKLIQITNSLIQNGAEGILLGCT 196
>gi|159044742|ref|YP_001533536.1| aspartate/glutamate racemase family protein [Dinoroseobacter shibae
DFL 12]
gi|157912502|gb|ABV93935.1| aspartate/glutamate racemase family protein [Dinoroseobacter shibae
DFL 12]
Length = 229
Score = 37.6 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 2/132 (1%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L++ + ++A NT L + + L A QA +++T
Sbjct: 68 AQALERGGAGILLLATNTMHKLADRMMEGV--GIPLLHIADATAQAILQAGLRRPGLMAT 125
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + + + + + S RV I+ + +
Sbjct: 126 AFTMEQQFYTGRLRAAGLDPVLPDPSDRATTHRVIYDELCKDIRTERSETAFVQIAGRLA 185
Query: 189 GKRTDVIVLACT 200
D ++L CT
Sbjct: 186 DGGADCLILGCT 197
>gi|260654243|ref|ZP_05859733.1| aspartate racemase [Jonquetella anthropi E3_33 E1]
gi|260630876|gb|EEX49070.1| aspartate racemase [Jonquetella anthropi E3_33 E1]
Length = 242
Score = 37.6 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + L ++ + + CNTA D R P + +A + +
Sbjct: 79 LKAGLETLCRWGADILAVPCNTA-HCFIDRFREELPKPLIHIVEATVSRALEVSPACW-- 135
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCH 149
+++T ATL +Q
Sbjct: 136 LVATGATLASGIYEKEGERQGAQFF 160
>gi|45357972|ref|NP_987529.1| glucose-methanol-choline oxidoreductase [Methanococcus
maripaludis S2]
gi|44920729|emb|CAF29965.1| conserved hypothetical archaeal protein [Methanococcus
maripaludis S2]
Length = 386
Score = 37.6 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHF 41
I++ SG+GG V ++++ P +
Sbjct: 4 IIVIGSGVGGSTVFKELKEAFPNQNI 29
>gi|50286077|ref|XP_445467.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524772|emb|CAG58378.1| unnamed protein product [Candida glabrata]
Length = 230
Score = 37.6 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 57/156 (36%), Gaps = 12/156 (7%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+ + L + L K V+ NT ++ ++++ + L V A+
Sbjct: 58 DDVAEYLAHAACN-LQKAGADFGVMCGNTP-HIVFEKIQGK-TDLPLLSMVQCSLDVASA 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+++L T T++ + + I+ S + + + G +++ +
Sbjct: 115 MGLKRLALLGTKFTMQNDFFKRPFEM--AGISIYT-PSPVEQETIHQKIVG-ELENGIVT 170
Query: 178 KEIEGCFI-----EKEGKRTDVIVLACTHYPLIVHV 208
+ + + + D ++L CT PLI++
Sbjct: 171 PDTKSTLLTIINGMIKEHGLDGVILGCTELPLILNQ 206
>gi|238787933|ref|ZP_04631729.1| Serine/threonine dehydratase family protein [Yersinia frederiksenii
ATCC 33641]
gi|238723881|gb|EEQ15525.1| Serine/threonine dehydratase family protein [Yersinia frederiksenii
ATCC 33641]
Length = 323
Score = 37.6 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPATLRRTYTSNLIHSY 144
++ +P+ +G PA + +SG + ++TPAT+ + + Y
Sbjct: 193 AKALYPNCQVIGVEPAAGNDGQLSFRSGKVVKIATPATIADGAQTQALGHY 243
>gi|255262038|ref|ZP_05341380.1| hydantoin racemase [Thalassiobium sp. R2A62]
gi|255104373|gb|EET47047.1| hydantoin racemase [Thalassiobium sp. R2A62]
Length = 227
Score = 37.6 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 10/133 (7%)
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
L +++ VIAC D +R T + LG A AA+ + S++
Sbjct: 57 LLAEVAKHPDVDAIVIAC--FDDTGVDAVR-TLVDVPVLGIGEAAYHAASMIANK-FSVI 112
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T + +NL+ ++Q + ++ I ++EE K IK EI +
Sbjct: 113 TTLSRSVPGLENNLMLYGLAQKCARVRATDIPVLKLEEGDPATLFK---IKSEIRESIAQ 169
Query: 187 KEGKRTDVIVLAC 199
T+ IVL C
Sbjct: 170 ---DNTEAIVLGC 179
>gi|114706117|ref|ZP_01439020.1| hypothetical protein FP2506_16664 [Fulvimarina pelagi HTCC2506]
gi|114538963|gb|EAU42084.1| hypothetical protein FP2506_16664 [Fulvimarina pelagi HTCC2506]
Length = 438
Score = 37.6 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 8/53 (15%)
Query: 165 YACGIKIKEDEIKKEIEGCFIEKEG---KRTDVIVLACT----HYPLIVHVFR 210
+ +E + E++G + + K D I+L CT HYP + R
Sbjct: 221 FHFPDNWEEKPLLTEVDGNTAKFKDGTTKHIDAIIL-CTGYLHHYPFLEDDLR 272
>gi|228945845|ref|ZP_04108189.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229121780|ref|ZP_04251001.1| Aspartate racemase [Bacillus cereus 95/8201]
gi|228661696|gb|EEL17315.1| Aspartate racemase [Bacillus cereus 95/8201]
gi|228813827|gb|EEM60104.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 147
Score = 37.6 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 7/113 (6%)
Query: 91 IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHI 150
+ ++++ + L A + + +L T T+ + + + I + +
Sbjct: 4 VVEKIKENI-HIPILHIADATAKEIKRKDIQTVGLLGTKYTMEQDFYKSRIEENHIKVVV 62
Query: 151 HLVSSMILASRV---EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+ V E I + E K + I++ + +L CT
Sbjct: 63 PSEKDRDKVNEVIYTELCLGKITSQSREYYKRVIENLIQEGAQGI---ILGCT 112
>gi|242808240|ref|XP_002485122.1| lipase 1 precursor, putative [Talaromyces stipitatus ATCC 10500]
gi|218715747|gb|EED15169.1| lipase 1 precursor, putative [Talaromyces stipitatus ATCC 10500]
Length = 481
Score = 37.6 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 43/147 (29%), Gaps = 18/147 (12%)
Query: 122 LISILSTPA-TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I + ++ + + L SY + I V+ L + V + E I
Sbjct: 197 KIGLWGYSGGSIASEFAAELRASYAPEIQIAGVAIGGLPTPVTAVL--DSVNETPYAGLI 254
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+P++ V + + A R +L +
Sbjct: 255 VSGLWGYANA-----------FPIVESYLLSRLTDEVK--SSGNFTAGRNMNILEIFAVY 301
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267
D + F+ G+ DI L+Q F
Sbjct: 302 AD--VDVFSYFVGGEDDIFSSPLLQYF 326
>gi|210635501|ref|ZP_03298582.1| hypothetical protein COLSTE_02521 [Collinsella stercoris DSM 13279]
gi|210158356|gb|EEA89327.1| hypothetical protein COLSTE_02521 [Collinsella stercoris DSM 13279]
Length = 238
Score = 37.6 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 21/140 (15%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA--VPAIKQAAAYTQSGLISILST 128
L+ I CNTA E + + L + AY + I +L+T
Sbjct: 72 WLEDAGADYIAIPCNTA--HFFYEQINAVAHVPVLNIMRETTSRIVEAYGEHATIGLLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA-CGIKIKEDEIKK-------EI 180
TL N Y+S+ + +V+ E+ A + + D IK+ E+
Sbjct: 130 DGTLTSGVFQN----YLSEAGLSVVAPSD-----EDQAKTVMPLIYDRIKRNLPYDPAEL 180
Query: 181 EGCFIEKEGKRTDVIVLACT 200
D +++ CT
Sbjct: 181 LDLARRMHENGCDAVIVGCT 200
>gi|320106695|ref|YP_004182285.1| regulatory protein IclR [Terriglobus saanensis SP1PR4]
gi|319925216|gb|ADV82291.1| regulatory protein IclR [Terriglobus saanensis SP1PR4]
Length = 362
Score = 37.6 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 61 KKRLMFLFSDILDKYQPV--LSVIACNTAFTL-IKDELRS--TFPSMAFLGAVPAIKQAA 115
+++ + +D L+++ + + A N L D +R +A +G AI +A
Sbjct: 247 REKSRKVVADFLNRHPKDKGVLIAAANDTSALGALDAVRELKREKQVAIVG-QDAIPEAV 305
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIH 142
A +++ T + Y + LIH
Sbjct: 306 AEIAKNKSALIGTVSHEAAGYGTRLIH 332
>gi|93004852|ref|YP_579289.1| aspartate racemase [Psychrobacter cryohalolentis K5]
gi|92392530|gb|ABE73805.1| Aspartate racemase [Psychrobacter cryohalolentis K5]
Length = 239
Score = 37.6 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 6/123 (4%)
Query: 80 SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
+IA NT + + ++ + A I++L T T+ +
Sbjct: 84 LLIATNTMHKVAEQV--QVATNLPLIHIADTTADAIKQQGLTKIALLGTQFTMTEDFYKQ 141
Query: 140 LIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ Q I + + R+ +E G + ++ E + + +L
Sbjct: 142 CLMDAGLQVLIPDTDARVEVHRIIYDELCQGQLLASS--RQYYTQVINELAAQGAEGAIL 199
Query: 198 ACT 200
CT
Sbjct: 200 GCT 202
>gi|71726058|gb|AAZ39181.1| probable aspartate/glutamate racemase [Janthinobacterium lividum]
Length = 230
Score = 37.6 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 42/145 (28%), Gaps = 11/145 (7%)
Query: 60 LKKRLMFLFSDILDKYQPVLSVIAC--NTA-FTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + ++ + L C NT RS P + V A + AA
Sbjct: 60 VAELMLASARKLAAAGADFLI---CPDNTIHQAFELMAPRSPLPWLHIADVV-ASEAAAR 115
Query: 117 YTQSGLISILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ + + T + L ++ + + E +K D
Sbjct: 116 GVR--RVGLTGTRWLVDSAVYPDRLAARGIACVRPGEDERSEINRIIMEKLVPGVVKGDS 173
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACT 200
+ + + + D ++L CT
Sbjct: 174 VARF-QAVIASLREQGCDAVILGCT 197
>gi|284054142|ref|ZP_06384352.1| aspartate racemase [Arthrospira platensis str. Paraca]
Length = 262
Score = 37.6 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 26/169 (15%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILS 127
IL+ VI CNT + +L + ++ ++ + A + + + IL+
Sbjct: 80 QILEVAGADFLVITCNT--SHGFYDLVQSQLNIPWIHIMQATVRFIKLHYPELNRVGILA 137
Query: 128 TPATLRRTYTSNLIHS---------YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
T TL+ + + + S+ ++++ I A G++I I
Sbjct: 138 TNGTLQAHLYQDSLTAAGLTAIAPILNSELQQDIMNA-IYHPIWGIKATGVQILPPPI-N 195
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
++ E + D+++ CT + LD S IA
Sbjct: 196 ILKTAVKWLENQGADLLIAGCT-------EISVVL----KLLDTSSLIA 233
>gi|54026948|ref|YP_121190.1| hypothetical protein nfa49740 [Nocardia farcinica IFM 10152]
gi|54018456|dbj|BAD59826.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 441
Score = 37.6 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 205 IVHVFRQLSPW-PVDWLDNSDS-IARRARCLLPRINTH--QTRVFDDHALFLSGKPDIAM 260
+ V +L P PV W+D+ D+ A LL RI H + RVFD HA L G+P +
Sbjct: 210 LTAVLARLVPEAPVTWVDSPDAITAAEIEALLTRIPAHSRRGRVFDAHAPLLRGQPSLLT 269
Query: 261 R 261
Sbjct: 270 E 270
>gi|238791924|ref|ZP_04635560.1| Aspartate racemase [Yersinia intermedia ATCC 29909]
gi|238728555|gb|EEQ20073.1| Aspartate racemase [Yersinia intermedia ATCC 29909]
Length = 231
Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 38/131 (29%), Gaps = 5/131 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+ NT + D + L A I +L T T
Sbjct: 71 LKNAGADVIVVCTNTMHKVADDI--EAASGLPLLHIADATAAQIKQQGINKIGLLGTRYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSS--MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + + S +R+ + + + ++E + E
Sbjct: 129 MEQDFYRGRLTEK-HGLEVITPDSIDRESVNRIIYEELCLGVISETSRQEYRRIMGKLEQ 187
Query: 190 KRTDVIVLACT 200
+ I+ CT
Sbjct: 188 QGVQGIIFGCT 198
>gi|311105568|ref|YP_003978421.1| aspartate racemase family protein 1 [Achromobacter xylosoxidans A8]
gi|310760257|gb|ADP15706.1| aspartate racemase family protein 1 [Achromobacter xylosoxidans A8]
Length = 234
Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 4/110 (3%)
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I IL T + + + + ++ Q +RV + + + E +
Sbjct: 121 RRIGILGTRWLVDSSVYPDQLEAHGLQWLRPSEEDRDTLARVIMDELVLGVFKPESVARL 180
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ D +VL CT PL+++ P LD++ +AR A
Sbjct: 181 QAVIERLRHAGCDAVVLGCTELPLVLNDGNAALPT----LDSTRILARAA 226
>gi|291520435|emb|CBK75656.1| aspartate racemase [Butyrivibrio fibrisolvens 16/4]
Length = 239
Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 14/134 (10%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSG--LISILST 128
L++ + C TA + IK+AA Y ++ G + I++T
Sbjct: 72 LERQNVDYIAMPCITA-----HFFHDQLADSVMIPVSNGIKEAAQYLSERGISKVGIMAT 126
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIE 186
T ++ Y +C + + ++ G + D ++
Sbjct: 127 DGTASMHLFDSVFKDYDIKCIYPDAAGQKAVMSIIYDDVKAGQPVNMDAFEQVKNQLL-- 184
Query: 187 KEGKRTDVIVLACT 200
V++L CT
Sbjct: 185 --DAGAQVVILGCT 196
>gi|157148393|ref|YP_001455712.1| putative racemase [Citrobacter koseri ATCC BAA-895]
gi|157085598|gb|ABV15276.1| hypothetical protein CKO_04217 [Citrobacter koseri ATCC BAA-895]
Length = 230
Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 46/138 (33%), Gaps = 3/138 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + D + S S+ FL A +A A +
Sbjct: 63 ILAQAALGLQQAGAEAIVLCTNTMHKVA-DTIESRC-SLPFLHIADATGRAIARKNMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + + + +++ + + ++
Sbjct: 121 ALLGTRYTMEQDFYRGRLEQRFAIETLVPETDDRAQINQIIFDELCLGEFSERSRQYYLQ 180
Query: 183 CFIEKEGKRTDVIVLACT 200
+ ++ CT
Sbjct: 181 VIERLAAQGAQGVIFGCT 198
>gi|323467192|gb|ADX70879.1| Aspartate racemase [Lactobacillus helveticus H10]
Length = 249
Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 9/121 (7%)
Query: 84 CNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQSGLISILSTPATLRRTYTSNLI 141
CNTA DEL + + FL + K Y + +++T ++R I
Sbjct: 84 CNTA-HYWYDEL-AALSDVPFLNMMEIAVHKFVDDYPDEKNLGLIATEGSIRDGLYVKYI 141
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD--VIVLAC 199
++ + V + G ++ ++ E+ + + V++L C
Sbjct: 142 KKVN---KTPVLGGPEIQLMVNQLIYGDIKEKGKVDPELFHHILTLMHDKYGCKVVLLGC 198
Query: 200 T 200
T
Sbjct: 199 T 199
>gi|238896363|ref|YP_002921099.1| putative racemase [Klebsiella pneumoniae NTUH-K2044]
gi|238548681|dbj|BAH65032.1| putative aspartate racemase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 237
Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 11/142 (7%)
Query: 64 LMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
++ + L + V+ NT A + + FL A +A A
Sbjct: 63 ILAEAAVGLQQAGAEGIVLCTNTMHKVADVIAARC------QVPFLHIADATGRAIAAKG 116
Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+++L T T+ +T+ L + + I +++ + + +
Sbjct: 117 QRRVALLGTRYTMEQTFYRGRLQEQFAIETLIPEADDRAQINQIIFDELCLGTFSEASRD 176
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
+ + ++ CT
Sbjct: 177 YYLQTIAALAEQGAEGVIFGCT 198
>gi|148926885|ref|ZP_01810563.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145844462|gb|EDK21570.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 193
Score = 37.2 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 3/120 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +IA NT + DE++ ++ L + +A
Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSN-LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L T T+ + + LI +S I+ + C +IK+D +K +
Sbjct: 119 KIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDIIFNELCKGEIKQDSKEKYL 178
>gi|257440518|ref|ZP_05616273.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
gi|257197022|gb|EEU95306.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
Length = 503
Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164
+G + +K T++G +S+ +T TL L + + +
Sbjct: 116 VGDIIGVKGEVFRTKTGELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDLIAN 175
Query: 165 YAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+K +I KEI EK D +L
Sbjct: 176 PEVKDTFVKRSQILKEIRAYLDEKGFLEVDTPIL 209
>gi|229116159|ref|ZP_04245550.1| Aspartate racemase [Bacillus cereus Rock1-3]
gi|228667276|gb|EEL22727.1| Aspartate racemase [Bacillus cereus Rock1-3]
Length = 227
Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 50/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 57 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + ++ + Y + I V I + +
Sbjct: 115 NI-KRIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGIISETSR 173
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 174 EKLIQITNSLIQNGAEGILLGCT 196
>gi|15218160|ref|NP_172993.1| aspartate-glutamate racemase family [Arabidopsis thaliana]
gi|5103839|gb|AAD39669.1|AC007591_34 Is a member of the PF|01177 Aspartate-glutamate racemase family.
EST gb|T43554 comes from this gene [Arabidopsis
thaliana]
gi|26983862|gb|AAN86183.1| unknown protein [Arabidopsis thaliana]
gi|332191198|gb|AEE29319.1| aspartate-glutamate racemase-like protein [Arabidopsis thaliana]
Length = 330
Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEE-YACGIKIKEDEIKK 178
+ +++T ATL + + S + + ++M + +E ++ + ++
Sbjct: 217 RVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKRKDMEGARNLLRI 276
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230
++ ++ V++L R L P +D D++AR A
Sbjct: 277 ALQVLLVQAVN----VVMLG-------SDEMRDLLPGDDPLLKKCVDPMDALARSA 321
>gi|313115333|ref|ZP_07800808.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310622364|gb|EFQ05844.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 503
Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164
+G + +K T++G +S+ +T TL L + + +
Sbjct: 116 VGDIIGVKGEVFRTKTGELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDLIAN 175
Query: 165 YAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+K +I KEI EK D +L
Sbjct: 176 PEVKDTFVKRSQILKEIRAYLDEKGFLEVDTPIL 209
>gi|303244614|ref|ZP_07330947.1| Creatininase [Methanothermococcus okinawensis IH1]
gi|302485040|gb|EFL47971.1| Creatininase [Methanothermococcus okinawensis IH1]
Length = 227
Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 45/141 (31%), Gaps = 21/141 (14%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIAC---NTAFTLIKDELRSTFPSMAFLGAVPAIK 112
+ + + L ++ ++ +I C NT + + ++L + + L +
Sbjct: 78 KPEEVIEYLKYIINEGKKLGVKKFLIINCHGGNTLISNLLNDLENQYSVRIILKNITFTH 137
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
A G + ++ + + + + + + + E I
Sbjct: 138 AATEELSVGSVIGIA-----------DEAENRLKEHDFNKYPEIGMVGLKEAREQNKYID 186
Query: 173 EDEIKKEIEGCFIEKEGKRTD 193
E E F+EK G + D
Sbjct: 187 E-------EAKFVEKHGVKID 200
>gi|227539078|ref|ZP_03969127.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33300]
gi|227241082|gb|EEI91097.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33300]
Length = 248
Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 66/181 (36%), Gaps = 27/181 (14%)
Query: 67 LFSDILDKYQPVLSVIACNTAFTL-----IKDELRSTFPSMAFL-GAVPAIKQAAAYTQS 120
+ S++ V + I C+TA + I+ EL++ + L A + S
Sbjct: 66 IISELEKSGATVAA-IPCHTAHAVPIFDIIRYELQNKEHKIRLLHMVEETSDYIATHFTS 124
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-------- 172
++ IL+T +++ + + +++ +
Sbjct: 125 PVVGILTTTGIRNTGLYNHVFA--AKGLKVI-QPAEEWQEKIQAAIHDEQYGIKASSSPV 181
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL---IVHVFRQLSPWPVDWLDNSDSIARR 229
+ K+E+ G E + + VIVL CT L + +++S P +D + +AR
Sbjct: 182 TNRAKEELVGAIHELKKEGATVIVLGCT--ELSWALRE--KEISGLP--LVDPNRILARA 235
Query: 230 A 230
Sbjct: 236 L 236
>gi|165976728|ref|YP_001652321.1| RacX protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|190150628|ref|YP_001969153.1| aspartate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|303250610|ref|ZP_07336807.1| RacX protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|303252061|ref|ZP_07338230.1| RacX protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307248334|ref|ZP_07530358.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|165876829|gb|ABY69877.1| RacX protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|189915759|gb|ACE62011.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|302649043|gb|EFL79230.1| RacX protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|302650598|gb|EFL80757.1| RacX protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306855155|gb|EFM87334.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
Length = 229
Score = 37.2 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 4/133 (3%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ +L++ ++A NT + + + S+ FL + A+ + +++L T
Sbjct: 68 AKLLEQAGAEGILLATNTMHKVASPIVEA--ISVPFLHILDAVADSIKAKGLTTVALLGT 125
Query: 129 PATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T+ + L ++ + + + E C + + K +
Sbjct: 126 AFTMSGNFYVDGLRQRGITPLVPDEQTQQEIHRIIFEELCVGQF-LPQSKAFYLKTIEKL 184
Query: 188 EGKRTDVIVLACT 200
++L CT
Sbjct: 185 TALGAQGVILGCT 197
>gi|307250562|ref|ZP_07532504.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|307252943|ref|ZP_07534831.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307263975|ref|ZP_07545576.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|306857378|gb|EFM89492.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306859581|gb|EFM91606.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306870664|gb|EFN02407.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 220
Score = 37.2 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 4/133 (3%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ +L++ ++A NT + + + S+ FL + A+ + +++L T
Sbjct: 59 AKLLEQAGAEGILLATNTMHKVASPIVEA--ISVPFLHILDAVADSIKAKGLTTVALLGT 116
Query: 129 PATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T+ + L ++ + + + E C + + K +
Sbjct: 117 AFTMSGNFYVDGLRQRGITPLVPDEQTQQEIHRIIFEELCVGQF-LPQSKAFYLKTIEKL 175
Query: 188 EGKRTDVIVLACT 200
++L CT
Sbjct: 176 TALGAQGVILGCT 188
>gi|229097169|ref|ZP_04228131.1| Aspartate racemase [Bacillus cereus Rock3-29]
gi|228685980|gb|EEL39896.1| Aspartate racemase [Bacillus cereus Rock3-29]
Length = 227
Score = 37.2 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 50/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 57 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + ++ + Y + I V I + +
Sbjct: 115 NI-KRIGLLGTKQTMEQDFYTSRLAKYNIETLIPNDEERTFIHHVILNELSRGIISETSR 173
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 174 EKLIQITNSLIQNGAEGILLGCT 196
>gi|206579517|ref|YP_002236732.1| aspartate racemase family protein [Klebsiella pneumoniae 342]
gi|206568575|gb|ACI10351.1| aspartate racemase family protein [Klebsiella pneumoniae 342]
Length = 237
Score = 37.2 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 11/142 (7%)
Query: 64 LMFLFSDILDKYQPVLSVIACNT----AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
++ + L + V+ NT A + + FL A +A A
Sbjct: 63 ILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARC------QVPFLHIADATGRAIAAKG 116
Query: 120 SGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+++L T T+ +T+ L + + I +++ + + +
Sbjct: 117 QRRVALLGTRYTMEQTFYRGRLQEQFAIETLIPEADDRARINQIIFDELCLGTFSEASRD 176
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
+ + ++ CT
Sbjct: 177 YYLQVIAALAEQGAEGVIFGCT 198
>gi|19115408|ref|NP_594496.1| hydantoin racemase family (predicted) [Schizosaccharomyces pombe
972h-]
gi|1351671|sp|Q09921|YAKA_SCHPO RecName: Full=Uncharacterized protein C1F7.10
gi|1067212|emb|CAA91957.1| hydantoin racemase family (predicted) [Schizosaccharomyces pombe]
Length = 238
Score = 37.2 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 18/134 (13%)
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-RTYTSNLIHSYV-SQCHIHL 152
LR T+ G + A A + +S+++T T R ++ IH+ S
Sbjct: 87 LRETYR-KPCTGIMQASIL-TALSLGRKVSVVTT--TKRYEPLLTDGIHAMGISDSVFAG 142
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK-RTDVIVLAC---THYPLIVHV 208
++S LA E+ + + + DVI L C TH + HV
Sbjct: 143 IASTGLAPL-----ELDSKPRAEVDALLARTALRAVNEMGADVICLGCAGMTH---MAHV 194
Query: 209 FRQLSPWPVDWLDN 222
+ + +D
Sbjct: 195 LEKAVGPNIPIIDG 208
>gi|229488801|ref|ZP_04382667.1| hydantoin racemase [Rhodococcus erythropolis SK121]
gi|229324305|gb|EEN90060.1| hydantoin racemase [Rhodococcus erythropolis SK121]
Length = 242
Score = 37.2 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 42/127 (33%), Gaps = 11/127 (8%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K + VIAC D R A A+ A+ + + T
Sbjct: 65 EKNEVDGYVIAC--FGDPGLDAARELAKGPVVAVAEAAMNYASFLGRG---FSIVTTLGR 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R ++L+ Y Q + S E + D K +E CF E +
Sbjct: 120 TRGRAADLVDRYGMQARCRGIHS------CEIPVLELDRDPDARKVILEACFDALEQDDS 173
Query: 193 DVIVLAC 199
DV+VL C
Sbjct: 174 DVLVLGC 180
>gi|260599188|ref|YP_003211759.1| hypothetical protein CTU_33960 [Cronobacter turicensis z3032]
gi|260218365|emb|CBA33405.1| Uncharacterized protein ygeA [Cronobacter turicensis z3032]
Length = 236
Score = 36.8 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 51/161 (31%), Gaps = 21/161 (13%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ V+ NT + ++ + ++ FL A +A A +++L T T
Sbjct: 71 LERAGAQAIVLCTNTMHKVA-HQIEARC-ALPFLHIADATGRAIAQAGLRQVALLGTRYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLV-----SSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+ + + + + + + + + C KI + K+ +
Sbjct: 129 MEQDFYR---ARLAQGFGVTSLIPNESARARINQIIFDELCLGKITAES-KRYYQQQIER 184
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSD 224
+ ++ CT L PV D +
Sbjct: 185 LAEQGAQGVIFGCT-------EIGLLLGAQDCPVPVFDTAA 218
>gi|254466317|ref|ZP_05079728.1| Asp/Glu/Hydantoin racemase family protein [Rhodobacterales
bacterium Y4I]
gi|206687225|gb|EDZ47707.1| Asp/Glu/Hydantoin racemase family protein [Rhodobacterales
bacterium Y4I]
Length = 250
Score = 36.8 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 60/182 (32%), Gaps = 33/182 (18%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ ++IA NT +R M L A +A A T + +L T T
Sbjct: 81 LERAGCDFALIASNTP-HARLHAIREGV-MMPVLSIFDATARATAATGAAQALVLGTAVT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE---IEGCFIEK- 187
++ +N++ H VS+ E I ED + + +
Sbjct: 139 MQARNYANVLAE-------HGVSANDTLPEAEIAEMQAMIDEDFYRGAACGAQDRLLRFC 191
Query: 188 -EGKRTDVIV-LACTHYPLIVHVFRQLSPWPVD----------WLDNSDS-IARRARCLL 234
+ R + LACT PL P +D +++ S + +A L
Sbjct: 192 GKHARPGTAILLACTELPL-------AFPDHIDDVSFEAGGFLFVNPSAAHVAAALDLAL 244
Query: 235 PR 236
Sbjct: 245 EE 246
>gi|238797440|ref|ZP_04640939.1| Aspartate racemase [Yersinia mollaretii ATCC 43969]
gi|238718711|gb|EEQ10528.1| Aspartate racemase [Yersinia mollaretii ATCC 43969]
Length = 231
Score = 36.8 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 39/125 (31%), Gaps = 8/125 (6%)
Query: 80 SVIAC-NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
V+ C NT + D + L A I +L T T+ + +
Sbjct: 78 VVVVCTNTMHKVADDI--EAASGLPLLHIADATAAQIKQQGINKIGLLGTRYTMEQDFYR 135
Query: 139 -NLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L + + + +R+ EE G+ ++E + E + I
Sbjct: 136 GRLTEKHDIDVITPDSADREIINRIIYEELCLGVINDSS--RQEYRRIMGKLEQQGVQGI 193
Query: 196 VLACT 200
+ CT
Sbjct: 194 IFGCT 198
>gi|228908369|ref|ZP_04072213.1| Aspartate racemase [Bacillus thuringiensis IBL 200]
gi|228851277|gb|EEM96087.1| Aspartate racemase [Bacillus thuringiensis IBL 200]
Length = 226
Score = 36.8 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 48/143 (33%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++K ++ NT ++ ++ + +G V A K+
Sbjct: 56 EEVKNELVTVAKK-VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 113
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + + + Y + I V I K
Sbjct: 114 NI-KRIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELSRGIISKTSK 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 173 EKLLQITKSLIQNGAEGILLGCT 195
>gi|110740155|dbj|BAF01976.1| hypothetical protein [Arabidopsis thaliana]
Length = 330
Score = 36.8 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEE-YACGIKIKEDEIKK 178
+ +++T ATL + + S + ++M + +E ++ + ++
Sbjct: 217 RVGVMATSATLSAGFYQEKLQSNGFEAVPPDKATMEHTVIPSIEAMKRKDMEGARNLLRI 276
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230
++ ++ V++L R L P +D D++AR A
Sbjct: 277 ALQVLLVQAVN----VVMLG-------SDEMRDLLPGDDPLLKKCVDPMDALARSA 321
>gi|13476966|ref|NP_108536.1| hydantoin racemase [Mesorhizobium loti MAFF303099]
gi|14027729|dbj|BAB54322.1| hydantoin racemase [Mesorhizobium loti MAFF303099]
Length = 250
Score = 36.8 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 13/128 (10%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ +VIAC D R+ ++ +G A A++ + +T
Sbjct: 67 ERRGAQAAVIAC--FDDTGLDAARAMA-NIPVIGICEAALSMASFIAQRFTVVTTTER-- 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-EDEIKKEIEGCFIEKEGKR 191
R L+ Y + ++ I +E+ A G K DEI + +E R
Sbjct: 122 SRVPVEGLVQRYGMAGRARVRAADIPVLALEDPASGATGKLRDEIARAVEE-------DR 174
Query: 192 TDVIVLAC 199
+ IVL C
Sbjct: 175 AEAIVLGC 182
>gi|225182088|ref|ZP_03735517.1| aspartate racemase [Dethiobacter alkaliphilus AHT 1]
gi|225167207|gb|EEG76029.1| aspartate racemase [Dethiobacter alkaliphilus AHT 1]
Length = 230
Score = 36.8 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 3/150 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+ + L+ + L+ ++ NT ++ + L A
Sbjct: 58 EKISQALIKVAGK-LESAGADFILLCTNTMHKFAEEI--QGAIDIELLHIAEATAVEVNR 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +L T T+ + + + + Q I + + V + I E K
Sbjct: 115 ANIKKVGLLGTRPTMEQDFYTKTLQQNGIQVVIPSHTDREITHNVIFQELCLGIITPESK 174
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
E + + + I+L CT PL++
Sbjct: 175 NEYKKIINGLIKQGAEGIILGCTEIPLLIK 204
>gi|226308240|ref|YP_002768200.1| hydantoin racemase [Rhodococcus erythropolis PR4]
gi|226187357|dbj|BAH35461.1| probable hydantoin racemase [Rhodococcus erythropolis PR4]
Length = 242
Score = 36.8 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 42/127 (33%), Gaps = 11/127 (8%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K + VIAC D R A A+ A+ + + T
Sbjct: 65 EKNEVDGYVIAC--FGDPGLDAARELAKGPVVAVAEAAMNYASFLGRG---FSIVTTLGR 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R ++L+ Y Q + S E + D K +E CF E +
Sbjct: 120 TRGRAADLVDRYGMQARCRGIHS------CEIPVLELDRDPDARKVILEACFDALEQDDS 173
Query: 193 DVIVLAC 199
DV+VL C
Sbjct: 174 DVLVLGC 180
>gi|301596772|ref|ZP_07241780.1| glutamate racemase [Acinetobacter baumannii AB059]
Length = 37
Score = 36.8 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 7 PCEKKL-QNSILIFDSGIGGLI 27
P K L I IFDSGIGG+
Sbjct: 13 PMPKALADAPIGIFDSGIGGMS 34
>gi|163794386|ref|ZP_02188358.1| Aspartate racemase [alpha proteobacterium BAL199]
gi|159180554|gb|EDP65075.1| Aspartate racemase [alpha proteobacterium BAL199]
Length = 230
Score = 36.5 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 2/96 (2%)
Query: 114 AAAYTQSG--LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
A T G I I T + + + + ++ +RV I
Sbjct: 109 AEEATARGMRRIGITGTRWLVDSEVYPEKLSALGLEYARPEMADRDEINRVIMDELVNSI 168
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
E + + + D +VL CT PLI+
Sbjct: 169 FRPEAVTTFQRVMGKMKAGGCDAVVLGCTEIPLIMD 204
>gi|205356462|ref|ZP_03223226.1| putative amino-acid recemase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345649|gb|EDZ32288.1| putative amino-acid recemase [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 193
Score = 36.5 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 3/120 (2%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+++ + L+ +IA NT + DE++ ++ L + +A
Sbjct: 61 AQILTQCAKKLELAGANFIIIATNTM-HKVFDEIQQNI-NIPILHIAKSSAKALKQENIQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEI 180
I +L T T+ + + ++ I + + + C +IK++ +K +
Sbjct: 119 KIGLLGTKYTMTQDFYKKVLIEENISVIIPSDEDIKIVNDIIFNELCKGEIKQESKEKYL 178
>gi|119718274|ref|YP_925239.1| aspartate racemase [Nocardioides sp. JS614]
gi|119538935|gb|ABL83552.1| aspartate racemase [Nocardioides sp. JS614]
Length = 229
Score = 36.5 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 51/142 (35%), Gaps = 6/142 (4%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
++ + ++ ++ C T F + D++ + + L + A +
Sbjct: 60 VAEILAGAARGVEAAGADFLLL-CTTTFHRVADQVAAAV-EIPLLHLADVVADACKAERL 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV--EEYACGIKIKEDEIKK 178
+ L T + R++ ++ I ++ H+ +RV +E G + ++
Sbjct: 118 DSVGFLGTTFAMSRSFFTDRIAAHGLTVHVPETRHHETLNRVIYDELVHGKVLDSS--RR 175
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
+ G E ++L CT
Sbjct: 176 TVVGLVDELWDAGAGGVILGCT 197
>gi|238919191|ref|YP_002932706.1| aspartate racemase, [Edwardsiella ictaluri 93-146]
gi|238868760|gb|ACR68471.1| aspartate racemase, putative [Edwardsiella ictaluri 93-146]
Length = 231
Score = 36.5 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 40/140 (28%), Gaps = 15/140 (10%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--- 157
+ + A + + +L T T+ + + + + ++
Sbjct: 98 GLPLIHIADATARQVQQQHIHRVGLLGTRFTMEQDFYRGRLQDKF-GIEVVTPAAADRDS 156
Query: 158 LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-- 215
+ + E C +I + ++E E + I+ CT L
Sbjct: 157 IHRIIYEELCLGRIHDAS-RREYRRIISRLEQQGAQGIIFGCT-------EIGLLVGPQD 208
Query: 216 -PVDWLDNSDSIARRARCLL 234
V D + AR A +
Sbjct: 209 AGVPVFDTTAIHARAAAEYI 228
>gi|229011906|ref|ZP_04169086.1| Aspartate racemase [Bacillus mycoides DSM 2048]
gi|228749320|gb|EEL99165.1| Aspartate racemase [Bacillus mycoides DSM 2048]
Length = 227
Score = 36.5 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 48/143 (33%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++ ++ NT ++ ++ + +G V A K+
Sbjct: 57 EEVKNELVAVAKK-VEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + ++ + Y + I V I + K
Sbjct: 115 NI-KRIGLLGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGIISETSK 173
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 174 EKLIQITNSLINNGAEGILLGCT 196
>gi|229060327|ref|ZP_04197693.1| Aspartate racemase [Bacillus cereus AH603]
gi|229167481|ref|ZP_04295219.1| Aspartate racemase [Bacillus cereus AH621]
gi|228616043|gb|EEK73130.1| Aspartate racemase [Bacillus cereus AH621]
gi|228718917|gb|EEL70534.1| Aspartate racemase [Bacillus cereus AH603]
Length = 227
Score = 36.5 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 48/143 (33%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++ ++ NT ++ ++ + +G V A K+
Sbjct: 57 EEVKNELVAVAKK-VEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + ++ + Y + I V I + K
Sbjct: 115 NI-KRIGLLGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGIISETSK 173
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 174 EKLIQITNSLINNGAEGILLGCT 196
>gi|145601767|ref|XP_363067.2| hypothetical protein MGG_08651 [Magnaporthe oryzae 70-15]
gi|145010276|gb|EDJ94932.1| hypothetical protein MGG_08651 [Magnaporthe oryzae 70-15]
Length = 1244
Score = 36.5 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 16/145 (11%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIAC--------NTAFTLIKDELRSTFPSMAFLGAVP 109
+K++ + + VIAC N+A T++ + +RS FP + F+ V
Sbjct: 32 ETIKRKRNDANTYMFGSMGEHNVVIACLPNGQYGTNSAATVVTNLIRS-FPEVRFVLMVG 90
Query: 110 AIKQAAAYTQSGLIS--ILSTPATLRRTYTS-NLIHSYVSQCHIH----LVSSMILASRV 162
A T + +++TP + S + IL + +
Sbjct: 91 IAGGAPNATNDVRLGDVVVATPGLGHGGVLQYDFGKSIQGPNFVVTGHLSPPPPILGTAI 150
Query: 163 EEYACGIKIKEDEIKKEIEGCFIEK 187
++ + + ++
Sbjct: 151 QQLRVSHDFDPNNLDALVKEALARY 175
>gi|327189079|gb|EGE56265.1| hypothetical protein RHECNPAF_730071 [Rhizobium etli CNPAF512]
Length = 255
Score = 36.5 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 13/148 (8%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF-LGAVPAI 111
G +++ ++S +D + V T +L + + P L +
Sbjct: 75 GALSRQTMRRLATHIWSA-VDAGASAVLV----TCSSLG-PAVDAAMPLCPVPLFRIDDG 128
Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIK 170
A I +L+T T T LI S+ + L++S + E+ G +
Sbjct: 129 VAIEALQCGDRIGVLATLFTTLSPTTH-LIESHAQRMGREILLTSHLCEGAFEKLRDGDR 187
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
D + +E + DV+VLA
Sbjct: 188 AAHDALIREGLAALL----GNVDVVVLA 211
>gi|289806464|ref|ZP_06537093.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 115
Score = 36.5 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 15/83 (18%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 23 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 78
Query: 117 YTQSGLISILSTPATLRRTYTSN 139
+ +L+T ATL
Sbjct: 79 -----HVGLLATNATLATGLYQK 96
>gi|332344731|gb|AEE58065.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 230
Score = 36.5 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 57/192 (29%), Gaps = 26/192 (13%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + D + S S+ FL A +A +
Sbjct: 63 ILAEAAFGLQRAGAEGIVLCTNTMHKVA-DVIESRC-SLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEIKKEIE 181
++L T T+ + + L + C I + + E C + E +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEAS-RAYYA 179
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ ++ CT L P R +LP +T
Sbjct: 180 QVIARLAEQGAQGVIFGCT-------EIGLLVPEE--------------RSVLPVFDTAA 218
Query: 242 TRVFDDHALFLS 253
D A LS
Sbjct: 219 IHAEDAVAFMLS 230
>gi|78066918|ref|YP_369687.1| aspartate racemase [Burkholderia sp. 383]
gi|77967663|gb|ABB09043.1| Aspartate racemase [Burkholderia sp. 383]
Length = 230
Score = 36.5 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 3/134 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L+ L V+ NT + + ++ FL A +++L
Sbjct: 67 AARQLEAAGADLVVLTTNTMHRVC--DAIEAAVTLPFLHIADPTGSALRDAGVERVALLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + L + + + R+ I E + E
Sbjct: 125 TRYTMELPFYAERLRGKFGMEVLVPDERGRDDVHRIIYDELCHGIISPESRATYVTIIEE 184
Query: 187 KEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 LARRGAQAVILGCT 198
>gi|299531138|ref|ZP_07044550.1| aspartate racemase [Comamonas testosteroni S44]
gi|298720841|gb|EFI61786.1| aspartate racemase [Comamonas testosteroni S44]
Length = 242
Score = 36.5 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 47/159 (29%), Gaps = 9/159 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L +ACNTA ++++ FP + L + +L+T
Sbjct: 80 LAALGVRSVALACNTA--HAWHGQIQALFPQLRVLHIAQQTALYLKAGGARQALVLATDG 137
Query: 131 TLRRTYTSNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKED-EIKKEIEGCFIEKE 188
T + + L + E + + E +++
Sbjct: 138 TYDSGLYDAALADCGIAALRPGQAGRARLMQGIYEGVKQGDMPLAVQCFGEALAPLLQRH 197
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
G +++ CT PL + Q +D + +A
Sbjct: 198 GAVP--VIMGCTEIPLALPQASQARGAE--LVDPAWILA 232
>gi|226313632|ref|YP_002773526.1| RNA polymerase ECF-type sigma factor [Brevibacillus brevis NBRC
100599]
gi|226096580|dbj|BAH45022.1| RNA polymerase ECF-type sigma factor [Brevibacillus brevis NBRC
100599]
Length = 189
Score = 36.5 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 14/66 (21%)
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTH-YPLIVHVFRQLSPWPVDWLDNSDSIAR----RAR 231
++EI+ F +VIVL CTH YP L ++S AR RAR
Sbjct: 118 RREIQEAFALLSDSYREVIVLRCTHEYPF--EKIATLLGI-------AESTARVRYLRAR 168
Query: 232 CLLPRI 237
L ++
Sbjct: 169 QELAKL 174
>gi|238759047|ref|ZP_04620217.1| Aspartate racemase [Yersinia aldovae ATCC 35236]
gi|238702724|gb|EEP95271.1| Aspartate racemase [Yersinia aldovae ATCC 35236]
Length = 231
Score = 36.5 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 13/135 (9%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+ NT + D T + L A + I +L T T
Sbjct: 71 LKHAGAEVIVVCTNTMHKVADDI--ETACGLPLLHIADATAAQIKQQEINKIGLLGTRYT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRV------EEYACGIKIKEDEIKKEIEGCFI 185
+ + + + HI +V+ + EE GI + + E
Sbjct: 129 MEQDFYRG---RLTEKHHIEVVTPESTDREIINRIIYEELCLGII--SETSRNEYRRIMG 183
Query: 186 EKEGKRTDVIVLACT 200
E + I+ CT
Sbjct: 184 ELVHQGVQGIIFGCT 198
>gi|56964466|ref|YP_176197.1| chromosome replication initiation/membrane attachment protein DnaB
[Bacillus clausii KSM-K16]
gi|56910709|dbj|BAD65236.1| chromosome replication initiation/membrane attachment protein DnaB
[Bacillus clausii KSM-K16]
Length = 480
Score = 36.5 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
T LI ++ V + +A+ VE+ + G + ED+++K I+ + + G +
Sbjct: 226 TDRLIDLIKKLAFVYQVEPLTMANLVEQASRGDMLDEDDLRKTIKEWYRLENGTKP 281
>gi|333016504|gb|EGK35835.1| hypothetical protein SFK304_3260 [Shigella flexneri K-304]
Length = 56
Score = 36.5 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 97 STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
+FP L + + Q + I++T T++ LI
Sbjct: 11 KSFP-FPILSIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIK 55
>gi|256422419|ref|YP_003123072.1| aspartate racemase [Chitinophaga pinensis DSM 2588]
gi|256037327|gb|ACU60871.1| aspartate racemase [Chitinophaga pinensis DSM 2588]
Length = 238
Score = 36.5 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 53/181 (29%), Gaps = 44/181 (24%)
Query: 52 YGNWEDH----------ALKKRLMFLF-------------SDILDKYQPVLSVIACNTA- 87
YG + A+ R + IL+ ++V+AC TA
Sbjct: 28 YGEKDQEYIDVLLHNNTAIPDRTRAIVYNETSPLPELLRSVKILNNNDVDVAVMACLTAY 87
Query: 88 ---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144
+L + + + V +++ + ++++ TLR +
Sbjct: 88 HFKSSLAPVF--NGYFADPIEFTVERLQEMFGDLDGLKVGVIASTGTLRSRIFQKALEPL 145
Query: 145 VSQCHIHLVSSMILASRVEEYACGIKIKEDEIK-----KEIEGCFIE----KEGKRTDVI 195
+ + E Y G K D +K E F + K DV+
Sbjct: 146 --GATVICLEGDEQ----ERYFMGPIYKPDGLKSGHASAEAIRLFAHQVPLLQDKGADVV 199
Query: 196 V 196
+
Sbjct: 200 I 200
>gi|194367443|ref|YP_002030053.1| response regulator receiver protein [Stenotrophomonas maltophilia
R551-3]
gi|194350247|gb|ACF53370.1| response regulator receiver protein [Stenotrophomonas maltophilia
R551-3]
Length = 280
Score = 36.5 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 30/172 (17%)
Query: 90 LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT---YTSNLIHSYVS 146
LI D LR P + +G +I++A G + +++T TLR + +I
Sbjct: 28 LIADVLRRDLPGVEVIGC-DSIEEAQQALAQGPVDLVTTSLTLRDGDGLALARMIREAAG 86
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
Q ++ V +++ + + F + G +
Sbjct: 87 QAYV--------PVIVVSGDAQQHLEQRRFTEYVTDYFDKALGHEA------------LA 126
Query: 207 HVFRQLS------PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
R + ++++S +A + +L R + V F
Sbjct: 127 TFIRGYVQPQTIPGATILYIEDSRVVAEATKRMLERQQLNVLHVVSAEEAFT 178
>gi|260770433|ref|ZP_05879366.1| hydantoin racemase [Vibrio furnissii CIP 102972]
gi|260615771|gb|EEX40957.1| hydantoin racemase [Vibrio furnissii CIP 102972]
Length = 243
Score = 36.5 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 12/144 (8%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
D + + + +IAC D R S+ +G A Q A+
Sbjct: 49 DETIAAAALLDVIAQGEAEGVDAHIIAC--FGDPAIDAARE-LASVPVIGIAGAAFQLAS 105
Query: 117 YTQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
S +++T TL +L+H Y V + +A +I+
Sbjct: 106 LV-SHRFGVVTTMSRTL--PAAEHLLHRYGYHHLCSGVRATDIAVL-----DLEQIQASA 157
Query: 176 IKKEIEGCFIEKEGKRTDVIVLAC 199
++ ++ C + IVL C
Sbjct: 158 YQQLLQECRAAINQDGAEAIVLGC 181
>gi|163940450|ref|YP_001645334.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
gi|163862647|gb|ABY43706.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
Length = 227
Score = 36.5 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++ ++ NT ++ ++ + +G V A K+
Sbjct: 57 EEVKNELVTVAKK-VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + ++ + Y + I V + + K
Sbjct: 115 NI-KRIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGVISETSK 173
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 174 EKLIQITNSLINNGAEGILLGCT 196
>gi|32188214|gb|AAP46180.1| conserved hypothetical protein [Sphingomonas elodea]
Length = 478
Score = 36.1 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 69/212 (32%), Gaps = 36/212 (16%)
Query: 32 MRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI 91
+ P+ ++ + D+ P G ++ ++ L ++ ++
Sbjct: 149 LVRTGPDEFYV-LEDNARTPSGVSYMLENREAMIRLCPELFRDFRVAPV----------- 196
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIH 151
++P M + ++ A ++ + ++ TP Y + +
Sbjct: 197 -----DSYPDM----LLETMRSVAPSGRARPVCVVLTPGHFNSAYYEHSF--LADSMGVE 245
Query: 152 LVSSMILA---SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
LV + L V +++ D I + I+ F++ + D + L + +
Sbjct: 246 LVEAADLVVDDDIVYMETIAGRVRVDVIYRRIDDDFLDPLVFKPDSL-LG------VPGL 298
Query: 209 FRQLSPWPVDWLD-NSDSIA--RRARCLLPRI 237
V L+ + IA + +P I
Sbjct: 299 IAAYRAGNVALLNAPGNGIADDKAIYSYMPEI 330
>gi|229589817|ref|YP_002871936.1| hypothetical protein PFLU2331 [Pseudomonas fluorescens SBW25]
gi|229361683|emb|CAY48564.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 455
Score = 36.1 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 8/52 (15%)
Query: 165 YACGIKIKEDEIKKEIE---GCFIEKEGKRTDVIVLACT----HYPLIVHVF 209
YA +E + + +E F++ K D ++L CT H+P +
Sbjct: 235 YAWPDNWEEKPLLQRLENNRAYFVDGSSKHIDAVIL-CTGYKHHFPFLPDEL 285
>gi|291086213|ref|ZP_06355123.2| aspartate racemase [Citrobacter youngae ATCC 29220]
gi|291068551|gb|EFE06660.1| aspartate racemase [Citrobacter youngae ATCC 29220]
Length = 231
Score = 36.1 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 45/139 (32%), Gaps = 5/139 (3%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
L+ + L + V+ NT + + + FL A +A Q +
Sbjct: 64 LLAQAAVGLQQAGAQGIVLCTNTMHKVAEAI--EAACDVPFLHIADATGRAIQKRQMNNV 121
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSS--MILASRVEEYACGIKIKEDEIKKEIE 181
++L T T+ + + + + + + + + + C + + ++
Sbjct: 122 ALLGTRYTMEQDFYRGRLQAEFGINTVIPDADERQKINQIIFDELCLGEFSDAS-REYYL 180
Query: 182 GCFIEKEGKRTDVIVLACT 200
E + ++ CT
Sbjct: 181 RVIGELAKQGAQGVIFGCT 199
>gi|255019972|ref|ZP_05292046.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Acidithiobacillus caldus ATCC 51756]
gi|254970631|gb|EET28119.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Acidithiobacillus caldus ATCC 51756]
Length = 377
Score = 36.1 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 22 GIGGLIVLQKMRFLMPEYHFIYVA 45
G GGL ++ +R +P+ +A
Sbjct: 10 GFGGLTAVRHLRRQLPDAEIHLLA 33
>gi|154174439|ref|YP_001407836.1| aspartate racemase [Campylobacter curvus 525.92]
gi|153793095|gb|EAT99446.2| aspartate racemase [Campylobacter curvus 525.92]
Length = 232
Score = 36.1 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTP 129
L +++CNTA +D + + L A A Y + I++++T
Sbjct: 73 LKNAGCEALLMSCNTAHFFAEDIQKQA--GVKILHIARAAVDAIKGRYPDAKDIAVIATS 130
Query: 130 ATLRRTYTSNLIHSY 144
T + ++ Y
Sbjct: 131 GTKKARVYDKILDEY 145
>gi|293449164|ref|ZP_06663585.1| aspartate racemase [Escherichia coli B088]
gi|300815740|ref|ZP_07095964.1| aspartate racemase [Escherichia coli MS 107-1]
gi|291322254|gb|EFE61683.1| aspartate racemase [Escherichia coli B088]
gi|300531669|gb|EFK52731.1| aspartate racemase [Escherichia coli MS 107-1]
gi|323183385|gb|EFZ68782.1| aspartate racemase family protein [Escherichia coli 1357]
gi|323946524|gb|EGB42548.1| Asp/Glu/Hydantoin racemase [Escherichia coli H120]
Length = 230
Score = 36.1 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 58/192 (30%), Gaps = 26/192 (13%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + D + S ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKVA-DAIESRC-TLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEIKKEIE 181
++L T T+ + + L+ + C I + + E C + E +
Sbjct: 121 ALLGTRYTMEQDFYRGRLMEQFSINCLIPEADERAKINQIIFEELCLGQFTEAS-RAYYA 179
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ ++ CT L P R +LP +T
Sbjct: 180 QVIARLAEQGAQGVIFGCT-------EIGLLVPEE--------------RSVLPVFDTAA 218
Query: 242 TRVFDDHALFLS 253
D A LS
Sbjct: 219 IHAEDAVAFMLS 230
>gi|229133473|ref|ZP_04262300.1| Aspartate racemase [Bacillus cereus BDRD-ST196]
gi|228649873|gb|EEL05881.1| Aspartate racemase [Bacillus cereus BDRD-ST196]
Length = 227
Score = 36.1 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 48/143 (33%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++ ++ NT ++ ++ + +G V A K+
Sbjct: 57 EEVKNELVTVAKK-VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + ++ + Y + I V + + K
Sbjct: 115 NI-KRIGLLGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGVISETSK 173
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 174 EKLIQITNSLINNGAEGILLGCT 196
>gi|160944697|ref|ZP_02091924.1| hypothetical protein FAEPRAM212_02211 [Faecalibacterium prausnitzii
M21/2]
gi|158443881|gb|EDP20885.1| hypothetical protein FAEPRAM212_02211 [Faecalibacterium prausnitzii
M21/2]
gi|295104347|emb|CBL01891.1| Lysyl-tRNA synthetase (class II) [Faecalibacterium prausnitzii
SL3/3]
Length = 503
Score = 36.1 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 1/94 (1%)
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164
+G + +K T++G +S+ +T TL L + + +
Sbjct: 116 VGDIIGVKGEVFRTKTGELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDLIAN 175
Query: 165 YAC-GIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
IK I KEI EK D +L
Sbjct: 176 PEVKDTFIKRSRILKEIRAYLDEKGFLEVDTPIL 209
>gi|195115910|ref|XP_002002499.1| GI12386 [Drosophila mojavensis]
gi|193913074|gb|EDW11941.1| GI12386 [Drosophila mojavensis]
Length = 348
Score = 36.1 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 12/77 (15%)
Query: 157 ILASRVEEYACGIKIKEDEIKKEIEGCF---IEKEGKRTDVIVLAC-THYPL--IVHVFR 210
L SRVE G+ E EI G F I D++VL C H PL + R
Sbjct: 49 ELLSRVERVIQGLW---PEALVEIFGSFRLGINLPNSDIDLVVLGCWEHLPLRSLESELR 105
Query: 211 Q---LSPWPVDWLDNSD 224
+ P + +D +
Sbjct: 106 SSGIVLPGTLQVVDTAA 122
>gi|152977916|ref|YP_001343545.1| aspartate racemase [Actinobacillus succinogenes 130Z]
gi|150839639|gb|ABR73610.1| aspartate racemase [Actinobacillus succinogenes 130Z]
Length = 231
Score = 36.1 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 16/137 (11%), Positives = 45/137 (32%), Gaps = 2/137 (1%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + +L++ ++A NT + + + S+ FL + + +
Sbjct: 63 ILAEQAKLLERAGADGILLATNTMHKVA-NRITDRI-SVPFLHILDVVANRIKARGLTHV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++L T T+ + + + + R+ + + + E K
Sbjct: 121 ALLGTAFTMSDNFYRDGLTQRGINAIVPDKKDQREIHRIIFDELCLGVIKPESKDFYLKT 180
Query: 184 FIEKEGKRTDVIVLACT 200
+ ++L CT
Sbjct: 181 IEKLTALGARGVILGCT 197
>gi|327396655|dbj|BAK14076.1| aspartate racemase YgeA [Pantoea ananatis AJ13355]
Length = 230
Score = 36.1 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 37/108 (34%), Gaps = 17/108 (15%)
Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR 161
+ FL A +A +++L T T+ + + + Q +++ L
Sbjct: 99 LPFLHIADATGRAITSKGMTRVALLGTRYTMEQDFY---LGRLNKQ---FSIAT--LVPP 150
Query: 162 VEEYACGIKIKEDEI---------KKEIEGCFIEKEGKRTDVIVLACT 200
E+ +I DE+ ++ E + + ++ CT
Sbjct: 151 AEQRNVINQIIFDELCMGKFSEGSRQYYLEVIQELASQGAEGVIFGCT 198
>gi|209547301|ref|YP_002279219.1| hypothetical protein Rleg2_5297 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538545|gb|ACI58479.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 232
Score = 36.1 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 15/125 (12%)
Query: 76 QPVLSVIACNTAFTL--IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
V+ C TL D + P F K A I +L+T +T
Sbjct: 76 GADAIVVTC---STLGPAVDAIAPLCPVPLFRIDEGMAKAAVE--HGNCIGVLATLSTTL 130
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI--KEDEIKKEIEGCFIEKEGKR 191
T++L+ + ++V +L ++ + + EI++ +E ++
Sbjct: 131 VP-TADLLRRQACEAGKNVVIDDVLVHGAFQFLADGNVEAHDAEIRRALEEL-----SQK 184
Query: 192 TDVIV 196
DVIV
Sbjct: 185 VDVIV 189
>gi|291619636|ref|YP_003522378.1| YgeA [Pantoea ananatis LMG 20103]
gi|291154666|gb|ADD79250.1| YgeA [Pantoea ananatis LMG 20103]
Length = 231
Score = 36.1 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 37/108 (34%), Gaps = 17/108 (15%)
Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR 161
+ FL A +A +++L T T+ + + + Q +++ L
Sbjct: 100 LPFLHIADATGRAITSKGMTRVALLGTRYTMEQDFY---LGRLNKQ---FSIAT--LVPP 151
Query: 162 VEEYACGIKIKEDEI---------KKEIEGCFIEKEGKRTDVIVLACT 200
E+ +I DE+ ++ E + + ++ CT
Sbjct: 152 AEQRNVINQIIFDELCMGTFTEGSRQYYLEVIQELASQGAEGVIFGCT 199
>gi|240172289|ref|ZP_04750948.1| putative dehydrogenase/reductase [Mycobacterium kansasii ATCC
12478]
Length = 393
Score = 36.1 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYH 40
+ +I+I +G+GGL +R L+P
Sbjct: 1 MSKTIVILGAGVGGLTTADSLRQLLPPED 29
>gi|222823740|ref|YP_002575314.1| aspartate racemase [Campylobacter lari RM2100]
gi|222538962|gb|ACM64063.1| aspartate racemase [Campylobacter lari RM2100]
Length = 227
Score = 36.1 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 10/133 (7%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L K +I NT + ++ + L A+ + +L T
Sbjct: 70 LLQKCGVDFILICTNTM-HKCYENIQKNI-QIPILHLAKAMLLELQEQNIDKVLLLGTKY 127
Query: 131 TLRRTYTSNLIHSYVSQCHIHLV---SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T++ + L+ S+ + + + L + C I E K+ + +
Sbjct: 128 TMQEDFYKQLL--INSKIEVFIPKNDDILKLNDIIFNELCKGIINEKS-KRYLCDLIAQF 184
Query: 188 EGKRTDVIVLACT 200
+ ++L CT
Sbjct: 185 --PQVQGVILGCT 195
>gi|308048287|ref|YP_003911853.1| aspartate racemase [Ferrimonas balearica DSM 9799]
gi|307630477|gb|ADN74779.1| aspartate racemase [Ferrimonas balearica DSM 9799]
Length = 236
Score = 35.7 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 7/139 (5%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ L + L++ +I NT + + S+ L A ++
Sbjct: 68 LALAAQALERAGAEGLLIGTNTMHKVAPQIANA--ISIPLLHIADATGARLQADGITCVA 125
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR---VEEYACGIKIKEDEIKKEIE 181
+L T T+ + + + + L + A + + C + +D + +
Sbjct: 126 LLGTRFTMEQAFYRERLEQ-GYGIEVRLPDAAERARIHQVIFDQLCQGQFNDDARRDYVA 184
Query: 182 GCFIEKEGKRTDVIVLACT 200
+ +L CT
Sbjct: 185 -IIERLHREGAQGAILGCT 202
>gi|213416637|ref|ZP_03349781.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 120
Score = 35.7 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 15/83 (18%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF------LGAVPAIKQAAA 116
R + + +L+ VI CNTA D+L++ + LG +P +
Sbjct: 32 RYLERYLHMLEDAGAECIVIPCNTA-HYWFDDLQNVAKARMISILDATLGDIPPSAR--- 87
Query: 117 YTQSGLISILSTPATLRRTYTSN 139
+ +L+T ATL
Sbjct: 88 -----HVGLLATNATLATGLYQK 105
>gi|166368626|ref|YP_001660899.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843]
gi|166090999|dbj|BAG05707.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843]
Length = 639
Score = 35.7 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 12/81 (14%)
Query: 158 LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL-------IVHVFR 210
L + E+Y +I ++ + IE+ R ++L YPL + R
Sbjct: 300 LLEKSEKYVIAKRIADNLSLDHLHASEIERLKARIQSLLL----YPLHAIGDKLVYGKIR 355
Query: 211 QLSPWPVD-WLDNSDSIARRA 230
Q V + S+AR
Sbjct: 356 QAVGNKVKILVSGGGSLARHL 376
>gi|332296382|ref|YP_004438305.1| phosphonate ABC transporter, periplasmic phosphonate-binding
protein [Thermodesulfobium narugense DSM 14796]
gi|332179485|gb|AEE15174.1| phosphonate ABC transporter, periplasmic phosphonate-binding
protein [Thermodesulfobium narugense DSM 14796]
Length = 346
Score = 35.7 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL 105
++KR F D+ + + +I TA + DE + ++ +
Sbjct: 129 IQKRTNFEIKDLFNSKAVDIGII---TASAYVLDEDQMDILAIPVI 171
>gi|221069700|ref|ZP_03545805.1| aspartate racemase [Comamonas testosteroni KF-1]
gi|220714723|gb|EED70091.1| aspartate racemase [Comamonas testosteroni KF-1]
Length = 242
Score = 35.7 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 17/163 (10%)
Query: 72 LDKYQPVLSVIACNTAFTLIKD-ELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L +ACNTA ++++ FP + L + +L+T
Sbjct: 80 LAALGVRSVALACNTA--HAWHGQIQALFPQLRVLHIAQQTALYLKAGGARQALVLATDG 137
Query: 131 TLRRTYTSNLIHSYVSQCHIHLV--SSMILASRVEEYACGIKIKEDEIK----KEIEGCF 184
T + + C I + A ++ G+K + + E
Sbjct: 138 TYDSGLYDAAL----ADCGIAALRPGPAGRARLMQGIYEGVKQGDMPLAVQCFGEALAPL 193
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+++ G +++ CT PL + Q +D + +A
Sbjct: 194 LQRHGAVP--VIMGCTEIPLALPQASQARGAE--LVDPAWILA 232
>gi|157363771|ref|YP_001470538.1| aspartate racemase [Thermotoga lettingae TMO]
gi|157314375|gb|ABV33474.1| aspartate racemase [Thermotoga lettingae TMO]
Length = 225
Score = 35.7 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 17/161 (10%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L++ + +V CNTA+ D ++ ++ L + I + T
Sbjct: 68 KMLEREKADFAVFICNTAYAF-LDRVQKQV-NIPVLNLPEMTLRKLKSKGIEEIWLTGTR 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI--KIKEDEIKKEIEGCFIEK 187
L I R++E I +K +IKK F +
Sbjct: 126 GLLNSRVYQREAEKIGLTLKIPE-------ERLQESLMQIIYTVKAGQIKKASLIWFSDV 178
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
E ++L CT P++ + +D +D A+
Sbjct: 179 EPYLDGHVLLGCTELPVVAKS------KRLHLIDVNDEWAK 213
>gi|312115228|ref|YP_004012824.1| multi-sensor signal transduction histidine kinase [Rhodomicrobium
vannielii ATCC 17100]
gi|311220357|gb|ADP71725.1| multi-sensor signal transduction histidine kinase [Rhodomicrobium
vannielii ATCC 17100]
Length = 493
Score = 35.7 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 211 QLSPWPVDWLDNSD---SIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
QL P ++++ A R LL + + AL SG P+ A+ RL + +
Sbjct: 94 QLIPQTRRLIESAPPQLERAERLTVLLDLMTRKADEMAGTVALAASGPPEAAIERLKENY 153
Query: 268 GL 269
G+
Sbjct: 154 GI 155
>gi|169831058|ref|YP_001717040.1| ATP-grasp domain-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169637902|gb|ACA59408.1| ATP-grasp domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 700
Score = 35.7 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 28/102 (27%), Gaps = 31/102 (30%)
Query: 25 GLIVLQ-------KMRFLMPEYHFIY-----VADDVGFPYGNWEDHALKKRLMFLFSDIL 72
GL + + +R +P IY + D R F +L
Sbjct: 322 GLTIARFNKATLEALRAELPREANIYNPVDVLGD-ARA-----------DRYRFALEKVL 369
Query: 73 -DKYQPVLSVIACNTAFTL------IKDELRSTFPSMAFLGA 107
D+ V+ C TA E+ FP G
Sbjct: 370 ADESVDSAVVLVCPTATAEPGETAKAIVEVARRFPDKPLFGV 411
>gi|83949723|ref|ZP_00958456.1| aspartate racemase [Roseovarius nubinhibens ISM]
gi|83837622|gb|EAP76918.1| aspartate racemase [Roseovarius nubinhibens ISM]
Length = 215
Score = 35.7 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L++ + CNTA D +R + FL + A + I
Sbjct: 54 VLAAMAQDLERAGAQALAMPCNTAHHYA-DAVREA-SGLPFLDMLELTAAHLAALGAKRI 111
Query: 124 SILSTPATLRRTYTSNLIHSY 144
+L++PAT R + ++
Sbjct: 112 GMLASPATRRVGVFDAIFAAH 132
>gi|251771898|gb|EES52472.1| transcriptional regulator, LysR family [Leptospirillum
ferrodiazotrophum]
Length = 309
Score = 35.7 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 18/99 (18%)
Query: 151 HLVSSMIL------ASRVEEYACGIKIKEDEIKK--EIEGCFIEKEGKRTDVIVLACTHY 202
V + + + ++ E+ +++ E E +G D +VL C+HY
Sbjct: 46 REVGAPLFSRFGRGVRLTKAGEVLLRESEEIVRQVGEALRRVREADGLARDRLVLGCSHY 105
Query: 203 --------PLIVHVFRQLSPWPVDWL-DNSDSIARRARC 232
P + R+ + + +S++IA + R
Sbjct: 106 VASNGLAAP-LREFGRRAPGVGITLVLGSSEAIAGKVRQ 143
>gi|229017933|ref|ZP_04174811.1| Aspartate racemase [Bacillus cereus AH1273]
gi|229024154|ref|ZP_04180621.1| Aspartate racemase [Bacillus cereus AH1272]
gi|228737150|gb|EEL87678.1| Aspartate racemase [Bacillus cereus AH1272]
gi|228743358|gb|EEL93480.1| Aspartate racemase [Bacillus cereus AH1273]
Length = 227
Score = 35.7 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 3/143 (2%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+K L+ + ++ ++ NT ++ ++ + +G V A K+
Sbjct: 57 EEVKNELVTVAKK-VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSA-KEMVEQ 114
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
I +L T T+ + + ++ + Y + I V I + K
Sbjct: 115 NI-KRIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVILNELSRGIISETSK 173
Query: 178 KEIEGCFIEKEGKRTDVIVLACT 200
+++ + I+L CT
Sbjct: 174 EKLIQITNSLIQNGAEGILLGCT 196
>gi|114769458|ref|ZP_01447084.1| flavin-containing monooxygenase [alpha proteobacterium HTCC2255]
gi|114550375|gb|EAU53256.1| flavin-containing monooxygenase [alpha proteobacterium HTCC2255]
Length = 444
Score = 35.7 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 5/33 (15%)
Query: 182 GCFIEKEGKRTDVIVLACT----HYPLIVHVFR 210
F + K D ++L CT H+P + R
Sbjct: 253 AHFKDGTSKEIDAVIL-CTGYQHHFPYLTDELR 284
>gi|146312927|ref|YP_001178001.1| putative racemase [Enterobacter sp. 638]
gi|145319803|gb|ABP61950.1| aspartate racemase [Enterobacter sp. 638]
Length = 230
Score = 35.7 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 101 SMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILA 159
S+ FL A +A A T +++L T T+ + + L + + + +
Sbjct: 98 SLPFLHIADATGRAIAATGMQRVALLGTRYTMEQDFYRGRLETQFGIESIVPDEADRARI 157
Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
+++ + D + G + + + ++ CT
Sbjct: 158 NQIIFEELCLGTFSDASRHYYLGVIDKLAKQGAEGVIFGCT 198
>gi|170743394|ref|YP_001772049.1| hypothetical protein M446_5292 [Methylobacterium sp. 4-46]
gi|168197668|gb|ACA19615.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 327
Score = 35.7 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 15/151 (9%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ-- 119
RL + D++ + V+ V+ NT L P + + PA T
Sbjct: 75 DRLDGMAEDLVREGVAVIVVLG-NTTSALAAKRATERIPIVVRMAVDPASIGLVQSTSRP 133
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLV----SSMILASR----VEEYACGIKI 171
G ++ +T L+ + + V ++ ILA R V E A +
Sbjct: 134 GGNLTGWTTLGAQIGPKQLELLRELIPPGVVVAVLVNPTNPILADRQAREVPEAARALGF 193
Query: 172 KEDEIK----KEIEGCFIEKEGKRTDVIVLA 198
+ + +I F G ++L
Sbjct: 194 EPLVVTASGDADIAAAFARLSGAGARGLILG 224
>gi|291278661|ref|YP_003495496.1| transcription-repair coupling factor [Deferribacter desulfuricans
SSM1]
gi|290753363|dbj|BAI79740.1| transcription-repair coupling factor [Deferribacter desulfuricans
SSM1]
Length = 1111
Score = 35.7 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 29/127 (22%)
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
R + F AI+ AA ++ ++IL+ L R + N I +
Sbjct: 594 RLVCGDVGFGKTEVAIRAAAKAVENYKQVAILAPTTVLVRQHYQNFIERFKD-------- 645
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
VE EIK+ +E + D+I+ TH +L
Sbjct: 646 -----MPVEIDYISRFKTSREIKRALER----LKKGEIDIII-G-TH---------RLLS 685
Query: 215 WPVDWLD 221
V++ D
Sbjct: 686 KDVEFYD 692
>gi|260574787|ref|ZP_05842790.1| Asp/Glu/hydantoin racemase [Rhodobacter sp. SW2]
gi|259023204|gb|EEW26497.1| Asp/Glu/hydantoin racemase [Rhodobacter sp. SW2]
Length = 226
Score = 35.7 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 41/126 (32%), Gaps = 13/126 (10%)
Query: 76 QPVLSVIACNTAFTL--IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
V+ C TL D R P + + AA I +L+T AT
Sbjct: 70 GADAVVVTC---STLGPAVDAARPLCP-VPLARIDEGMAMAA-VRLGARIGVLATVATTL 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEY-ACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ TS+LI + + + LA + A G D +
Sbjct: 125 QP-TSDLIRRMAAAADRDISLTAKLAEGAFQKLAQGDTAAHDAMVGRALRNLAPL----V 179
Query: 193 DVIVLA 198
DVIVLA
Sbjct: 180 DVIVLA 185
>gi|169840380|ref|ZP_02873568.1| hypothetical protein cdivTM_25124 [candidate division TM7
single-cell isolate TM7a]
Length = 23
Score = 35.7 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 74 KYQPVLSVIACNTAFTLIKDE 94
+ V+ACNTA L +
Sbjct: 3 EKNVSAIVVACNTATALALKD 23
>gi|315181503|gb|ADT88416.1| Asp/Glu racemase [Vibrio furnissii NCTC 11218]
Length = 243
Score = 35.3 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 12/144 (8%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
D + + + +IAC D R S+ +G A Q A+
Sbjct: 49 DETIAAAALLDVIAQGEADGVDAHIIAC--FGDPAIDAARE-LASVPVIGIAGAAFQLAS 105
Query: 117 YTQSGLISILST-PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
S +++T TL +L+H Y V + +A +I+
Sbjct: 106 LV-SHRFGVVTTMSRTL--PAAEHLLHRYGYHHLCSGVRATDIAVL-----DLEQIQASA 157
Query: 176 IKKEIEGCFIEKEGKRTDVIVLAC 199
++ ++ C + IVL C
Sbjct: 158 YQQLLQECRAAISQDGAEAIVLGC 181
>gi|323491837|ref|ZP_08097012.1| aspartate racemase [Vibrio brasiliensis LMG 20546]
gi|323313972|gb|EGA67061.1| aspartate racemase [Vibrio brasiliensis LMG 20546]
Length = 230
Score = 35.3 bits (81), Expect = 8.3, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 48/142 (33%), Gaps = 11/142 (7%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + ++K +IA NT + + ++ L A +
Sbjct: 63 ILCQAAQSIEKAGADFILIATNTMHKVAEQV--EESVNLPLLHIADATGSELKQQGITKV 120
Query: 124 SILSTPATLRRTYT-SNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKI---KEDEIKK 178
+L T T+ + + L + + + L + + + C +I +D+
Sbjct: 121 GLLGTVFTMEQDFYKQRLTDKFGIEVVVPNGVQRQLVHNIIYDELCQGEINRRSKDDFLT 180
Query: 179 EIEGCFIEKEGKRTDVIVLACT 200
I+ F+ ++L CT
Sbjct: 181 IIDDLFV----AGAQGVILGCT 198
>gi|331654323|ref|ZP_08355323.1| putative resistance protein [Escherichia coli M718]
gi|331047705|gb|EGI19782.1| putative resistance protein [Escherichia coli M718]
Length = 230
Score = 35.3 bits (81), Expect = 8.3, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 26/192 (13%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + D + S ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKVA-DAIESRC-TLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEIKKEIE 181
++L T T+ + + L + C I + + E C + E +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEAS-RAYYA 179
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ ++ CT L P R +LP +T
Sbjct: 180 QVIARLAEQGAQGVIFGCT-------EIGLLMPEE--------------RSVLPVFDTAA 218
Query: 242 TRVFDDHALFLS 253
D A LS
Sbjct: 219 IHAEDAVAFMLS 230
>gi|218670847|ref|ZP_03520518.1| Asp/Glu/hydantoin racemase [Rhizobium etli GR56]
Length = 145
Score = 35.3 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 16/108 (14%)
Query: 131 TLRRTY--TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL R+ NL+ Y + +S I +E+ A G +++ EIE E
Sbjct: 14 TLERSRVLIDNLVRRYGMGERAKVRASDIPVLELEDAASGAI---GKLRAEIERALAE-- 68
Query: 189 GKRTDVIVLAC---THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ IVL C T + +++ V +D + ++A L
Sbjct: 69 -DGAEAIVLGCAGMT---DLARELQEIYG--VPVVDGVAAAVKQAEAL 110
>gi|289579706|ref|YP_003478172.1| ABC transporter [Natrialba magadii ATCC 43099]
gi|289529259|gb|ADD03610.1| ABC transporter related protein [Natrialba magadii ATCC 43099]
Length = 395
Score = 35.3 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 34/130 (26%), Gaps = 33/130 (25%)
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA---------SRVE 163
QA A T S I++L L + + + + +E
Sbjct: 194 QAEAMTMSNRIAVL------NEGKLQQL----APPLECYNEPANLFVAGFIGSPSMNFME 243
Query: 164 EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
+ + + E + + + L + P V + +
Sbjct: 244 GELTATGFESENVDVAFEPELVPSMDVG-ETLTLG-------------VRPEDVHLVATA 289
Query: 224 DSIARRARCL 233
D +A + L
Sbjct: 290 DGVAEQTAEL 299
>gi|312385101|gb|EFR29677.1| hypothetical protein AND_01156 [Anopheles darlingi]
Length = 175
Score = 35.3 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI-LASRVEEYACGIK---IKEDEIKK 178
I + TP T + L+ VS+++ VEEY ++ + ED +
Sbjct: 6 ILVTGTPGTGKSELCKLLVEKLAPDFTWQSVSAIVSEHGFVEEYDEDLQCPVLDEDRLLD 65
Query: 179 EIEGCFIE 186
+E +
Sbjct: 66 YLEPIMQQ 73
>gi|224367434|ref|YP_002601597.1| RacD1 [Desulfobacterium autotrophicum HRM2]
gi|223690150|gb|ACN13433.1| RacD1 [Desulfobacterium autotrophicum HRM2]
Length = 241
Score = 35.3 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTA---FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
M L+ + VIACNTA + ++D + P + +G V Y +
Sbjct: 68 CMADMGRRLETWGADFLVIACNTAHHYYQAVQDAV--NIPVIHIVGLV-TDHLIQKYPEH 124
Query: 121 GLISILSTPA 130
I +L++PA
Sbjct: 125 KKIGMLASPA 134
>gi|197105900|ref|YP_002131277.1| Asp/Glu racemase [Phenylobacterium zucineum HLK1]
gi|196479320|gb|ACG78848.1| Asp/Glu racemase [Phenylobacterium zucineum HLK1]
Length = 248
Score = 35.3 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 18/131 (13%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLISILSTPAT 131
V+ C +R S+ LG A+ AA SIL T
Sbjct: 63 QNDGADAIVVVC--MGDPALHAVREAV-SVPVLGIGETAMHYAAMLGH--KFSILCTLD- 116
Query: 132 LRRTYTSNLIHSYVSQCH---IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
RR+Y + Y + V++ +LA +E+ + + +E +
Sbjct: 117 RRRSYYVDKARQYGLDSKLASVRTVNTPVLA--IED------DHASTLDRLVEAAAVAII 168
Query: 189 GKRTDVIVLAC 199
DVIVL C
Sbjct: 169 QDGADVIVLGC 179
>gi|222081897|ref|YP_002541262.1| monooxygenase protein [Agrobacterium radiobacter K84]
gi|221726576|gb|ACM29665.1| monooxygenase protein [Agrobacterium radiobacter K84]
Length = 445
Score = 35.3 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Query: 182 GCFIEKEGKRTDVIVLACT----HYPLIVHVFR 210
F++ K D ++L CT H+P + R
Sbjct: 254 AHFLDGSKKEVDALIL-CTGYQHHFPFLPDELR 285
>gi|288961380|ref|YP_003451719.1| hydantoin racemase [Azospirillum sp. B510]
gi|288913688|dbj|BAI75175.1| hydantoin racemase [Azospirillum sp. B510]
Length = 234
Score = 35.3 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 15/121 (12%)
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGA-VPAIKQAAAYTQSGLISILSTPATLRR-TYTS 138
VIAC + D RS +G A++ A G S+++T A R
Sbjct: 74 VIAC--FDDVGLDAARS-LADAPVVGICEVAMQTAGLL--GGRFSVVTTLA--RSVPALE 126
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
L Y + ++ + +E+ A G + ++ EI E + IVL
Sbjct: 127 RLAQRYGMAGRCTIRAAGVPVLALEDPASG---AVERVRAEIRRA---MERDGAETIVLG 180
Query: 199 C 199
C
Sbjct: 181 C 181
>gi|312886659|ref|ZP_07746266.1| Asp/Glu/hydantoin racemase [Mucilaginibacter paludis DSM 18603]
gi|311300761|gb|EFQ77823.1| Asp/Glu/hydantoin racemase [Mucilaginibacter paludis DSM 18603]
Length = 219
Score = 35.3 bits (81), Expect = 9.5, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 13/101 (12%)
Query: 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV----SQCHIHLVSSMI 157
+ L + A T I +++T +T TS+L+ + +
Sbjct: 93 VPVLRVDQPMADLAVQT-GKRIGVIATLSTTLEP-TSDLVQRRAALAGKEIELTSQVCEG 150
Query: 158 LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
E G K DE+ ++ K+ DVI+LA
Sbjct: 151 ---AFEALMAGDSAKHDELVADVLRHL----SKKVDVILLA 184
>gi|304410806|ref|ZP_07392423.1| periplasmic binding protein/LacI transcriptional regulator
[Shewanella baltica OS183]
gi|307305023|ref|ZP_07584773.1| periplasmic binding protein/LacI transcriptional regulator
[Shewanella baltica BA175]
gi|304350703|gb|EFM15104.1| periplasmic binding protein/LacI transcriptional regulator
[Shewanella baltica OS183]
gi|306912425|gb|EFN42849.1| periplasmic binding protein/LacI transcriptional regulator
[Shewanella baltica BA175]
Length = 213
Score = 35.3 bits (81), Expect = 9.6, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 9/101 (8%)
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL----ISILSTPATLRR 134
+IA NTA LI D + + + + V I ++S + +S+ +T +
Sbjct: 114 AYIIAANTADGLIADIEQLSAAGIPVIDLVNGIATDKLTSRSLVSFADMSVAATEYIAAQ 173
Query: 135 TYTSNLIHSYVSQCHIHLVSSMI---LASRVEEYACGIKIK 172
I+ + + E+ I +
Sbjct: 174 Q--REAINQESPKLKVAWFPGPKGASWVMAAEQGFIPITLN 212
>gi|288924191|ref|ZP_06418229.1| aspartate racemase [Frankia sp. EUN1f]
gi|288344463|gb|EFC78954.1| aspartate racemase [Frankia sp. EUN1f]
Length = 229
Score = 35.3 bits (81), Expect = 9.7, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 27/186 (14%)
Query: 30 QKMRFLMPEYH----FIY---VADDV---GFPYGNWEDHALKKRLMFLFSDILDKYQPVL 79
+++R + H IY AD G+W+ A L + + D
Sbjct: 24 RQVRDRLRGLHSARCLIYSVDFADIEEMQRA--GSWDAAA--NYLARCAAKLQD-GGAEC 78
Query: 80 SVIACNTA----FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ NT +L + + L + + ++L T T+ +
Sbjct: 79 IVLCTNTMHRVFDSLAAET------DVPVLHIADGTAASLRAAGVEVAALLGTQYTMEQD 132
Query: 136 YTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + S + + + C K+ + +K ++ + GK
Sbjct: 133 FYKGRLEQQGVKVVVPDADSRKIVHDIIYDELCRGKVVDSSREKYVK-IVDDLAGKGAQA 191
Query: 195 IVLACT 200
++ CT
Sbjct: 192 VIFGCT 197
>gi|225024788|ref|ZP_03713980.1| hypothetical protein EIKCOROL_01675 [Eikenella corrodens ATCC
23834]
gi|224942495|gb|EEG23704.1| hypothetical protein EIKCOROL_01675 [Eikenella corrodens ATCC
23834]
Length = 280
Score = 35.3 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 87 AFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISILST-PATLRRTYTSNLIHSY 144
A TL+ +R F + AI AA T + +++++T P T T+T ++
Sbjct: 185 ASTLLYYIIRQAPFGEAHLIDNDVAIDFAAVTTPNDRVAVIATQPLTANETWTQLAVNEL 244
Query: 145 VS--QCHIHLVSSM 156
V+ I L
Sbjct: 245 VAFRDGDIILRDCP 258
>gi|54022337|ref|YP_116579.1| putative ABC transporter ATP-binding protein [Nocardia farcinica
IFM 10152]
gi|54013845|dbj|BAD55215.1| putative ABC transporter ATP-binding protein [Nocardia farcinica
IFM 10152]
Length = 303
Score = 35.3 bits (81), Expect = 10.0, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 8/114 (7%)
Query: 150 IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209
I ++S + +E G+ + ++ + + +VL+ TH ++
Sbjct: 153 IIGLASRAPLTLFDEPYLGL---DAVARQLFYDRLLADYAENPRTVVLS-TH---LIDEV 205
Query: 210 RQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRL 263
L V +D +A A L + F++G+P++ L
Sbjct: 206 ADLL-EHVIVIDRGRVVADAAADQLRESAITVAGPVGEVDRFVAGRPELRREAL 258
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.316 0.190 0.658
Lambda K H
0.267 0.0580 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,123,673,802
Number of Sequences: 14124377
Number of extensions: 319691102
Number of successful extensions: 1081124
Number of sequences better than 10.0: 3605
Number of HSP's better than 10.0 without gapping: 4231
Number of HSP's successfully gapped in prelim test: 1743
Number of HSP's that attempted gapping in prelim test: 1063385
Number of HSP's gapped (non-prelim): 6251
length of query: 271
length of database: 4,842,793,630
effective HSP length: 137
effective length of query: 134
effective length of database: 2,907,753,981
effective search space: 389639033454
effective search space used: 389639033454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.6 bits)
S2: 81 (35.3 bits)